GeneSeqer. Version of March 12, 2006. Date run: Mon Aug 28 22:16:00 2006 (Bayesian) Splice site model (species): Arabidopsis thaliana Fast search parameters: MinMatchLen 16, MinQualityHSP 30, MinQualityCHAIN 50. Total number of ESTs: 175665 Total sequence length: 93213537 Minimum sequence length: 89 Maximum sequence length: 1082 Length distribution (number of sequences of specified length): < 100: 1 < 200: 2188 < 300: 8544 < 400: 20465 < 500: 39499 < 600: 49432 < 700: 32872 < 800: 19308 < 900: 3155 < 1000: 193 >=1000: 8 Input file : /tmp/bac-submission-temp-MJl4T/C08HBa0235H18/C08HBa0235H18.seq.screen ________________________________________________________________________________ Sequence 1: C08HBa0235H18.1, from 1 to 108061, both strands analyzed. ... started at: Mon Aug 28 22:42:56 2006 EST library file: /tmp/cxgn-bacpublish-resources-6hCK9c/sgn_ests; matching gDNA +strand ... ... found all matches, elapsed seconds = 7 ... matches indexed, elapsed seconds = 8 HitsTableSize = 454 EST library file: /tmp/cxgn-bacpublish-resources-6hCK9c/sgn_ests; matching gDNA -strand ... ... found all matches, elapsed seconds = 6 ... matches indexed, elapsed seconds = 6 HitsTableSize = 816 ******************************************************************************** EST sequence 1115 +strand 589 n (File: SGN-E357091+) 1 TGAACCAGAA TGGAATGAAA CATTTGTTTT CTCCATTTCT GAGGATGCTG AAGAACTCTT 61 CTTGAAGATA ATGGACAGTG ATTCTATCGG CGAGGACGAT ATTGTTGGGG AAGCTAAGAT 121 ACCAATTGAA CCAGTTTTTT CAGAAGGGAG CATCCCAATA ACATGTTATA ATGTTGTTAA 181 AGATGAGGAA TATTGTGGAG AAATTAAAGT TGGTCTCACC TTTACTCCTG AGGAATATTC 241 TGAGAGGGAG TATGAAGAAG AGAACCTTGG TGGATGGAAA GAGTCTTCTT ATTGATGTGA 301 AGCATTACTC GACTGATCAA TTTGTTCTTG CTTAAATTAT GAACTTATCT TACCCGTTAT 361 AACATTTTCA AGTGTTAAAA GTGTGGATTT CATATAGTAA AAAAGAAAAG AGCTATTTTG 421 AGTCTATACG GGTTACTGTA ATAAAAATGT TGGGATTTTC TTTTCATTTT TCAAGTTAAA 481 TTATTTTATC ATATGCTACA ATGTAAGGTT TGTTATTATG CAGAACAACA ATGTCAAGTT 541 ATGAGATAAT CAAGTCAAAT ATCTAGAAAT TATTGTGAAG AAAAAAAAA Predicted gene structure (within gDNA segment 2880 to 1): Exon 1 2280 2164 ( 117 n); cDNA 1 117 ( 117 n); score: 1.000 Intron 1 2163 1009 (1155 n); Pd: 0.998 (s: 1.00), Pa: 0.997 (s: 1.00) Exon 2 1008 894 ( 115 n); cDNA 118 232 ( 115 n); score: 1.000 Intron 2 893 726 ( 168 n); Pd: 0.999 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 3 725 375 ( 351 n); cDNA 233 583 ( 351 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E357091+ 1.000 583 0.990 C PGS_C08HBa0235H18.1-_SGN-E357091+ (2280 2164,1008 894,725 375) Alignment (genomic DNA sequence = upper lines): TGAACCAGAA TGGAATGAAA CATTTGTTTT CTCCATTTCT GAGGATGCTG AAGAACTCTT 2221 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAACCAGAA TGGAATGAAA CATTTGTTTT CTCCATTTCT GAGGATGCTG AAGAACTCTT 60 CTTGAAGATA ATGGACAGTG ATTCTATCGG CGAGGACGAT ATTGTTGGGG AAGCTAAGTA 2161 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| CTTGAAGATA ATGGACAGTG ATTCTATCGG CGAGGACGAT ATTGTTGGGG AAGCTAA... 117 AGTATATCTA ATTAGAGGCG AATCTAAGAT TATACGTATT TTCTCTATAT TAACATAGTT 2101 .......... .......... .......... .......... .......... .......... 117 TGAGTTTGAT AGTACATGCA TCCATGACTT GTATATGTTG AGATAAATAG ACGTATATGA 2041 .......... .......... .......... .......... .......... .......... 117 CTTTAGATAA GAAGACGTGG AGGTCGAAAA TTAGGGTAGA AGGTTAGTAG TTAGTGAGCC 1981 .......... .......... .......... .......... .......... .......... 117 TGAGTGTTGT TGCACTTGTT ATTGGAGAGG AAGAGGGCTA GCCTAGTCTC TACTTCTCCT 1921 .......... .......... .......... .......... .......... .......... 117 TTTTAGTAGT AGTATTTTGT ATATCGCGTA GTTTCCTTTC TTTAATGATT ATTACAATCA 1861 .......... .......... .......... .......... .......... .......... 117 GTTGCTTCAT TTGATTTGTA TCTTGCTATT TTGTCGTTTT ATTTACTTGC ACCATGCTTT 1801 .......... .......... .......... .......... .......... .......... 117 TTCTTTTCTT TTCTTTTGAG TTCAGGGTCC TTCGTGAACA ACCTGCAAAG GTAGGGGTAT 1741 .......... .......... .......... .......... .......... .......... 117 GTTCAGCGTA CATCGATATC CTACCTTCCC AATATCCAAC TTGTGAAATT ACACTGAATA 1681 .......... .......... .......... .......... .......... .......... 117 TATAGTTATT TTTGTGGTTG TTGTAGTATA CATCTACTTT CTAGTGGTGT TATACAAACC 1621 .......... .......... .......... .......... .......... .......... 117 ATGGTTTAAA CGGTTGAGAT TATTAGTTCA TGGAGTCGAA TAAGCATTTG CCTAAAACAG 1561 .......... .......... .......... .......... .......... .......... 117 TTGAGATTAT TAGTTCATGG AGTCGAATAA GCATTTCCCT AAAACAGTTG AGATTATTAG 1501 .......... .......... .......... .......... .......... .......... 117 TTCATGGAGT CGAATAAGCA TTTGCCTAAA ACAGTTGAGA TTATTAGTTC ATGGAGTCGA 1441 .......... .......... .......... .......... .......... .......... 117 ATAAGCATTT GCCTAAAACA GTTGAGATTA TTAGTTCATG GAGTCGAATA AGCATTTGCC 1381 .......... .......... .......... .......... .......... .......... 117 TAAAACAGTT GAGATTATTA GTTCATGGAG TCGAATAAGC ATTTGCCTAA AACAGTTGAG 1321 .......... .......... .......... .......... .......... .......... 117 ATTATTAGTT CATGGAGTCG AATAAGCATT TGCCTAAAAC AGTTGAGATT ATTAGTTCAT 1261 .......... .......... .......... .......... .......... .......... 117 GGAGTCGAAT AAGCATTTGC CTAAAACAGT TGAGATTATT AGTTCATGGA GTCGAATAAG 1201 .......... .......... .......... .......... .......... .......... 117 CATTTGCCTA AAACAGTTGA GATTATTAGT TCATGGAGTC GAATAAGCAT TTACCTATCA 1141 .......... .......... .......... .......... .......... .......... 117 GAGACGAATC TAAGATTTAT ACAATTTCTG TATATACAAT TTCTGTATAT ATATATATAT 1081 .......... .......... .......... .......... .......... .......... 117 ATATATATGC AAACATAATC TGAGTTTGCT AGTATTGGTT TTGAGATATG TTCAATAATA 1021 .......... .......... .......... .......... .......... .......... 117 TGTTACTTGC AGGATACCAA TTGAACCAGT TTTTTCAGAA GGGAGCATCC CAATAACATG 961 |||||||| |||||||||| |||||||||| |||||||||| |||||||||| .......... ..GATACCAA TTGAACCAGT TTTTTCAGAA GGGAGCATCC CAATAACATG 165 TTATAATGTT GTTAAAGATG AGGAATATTG TGGAGAAATT AAAGTTGGTC TCACCTTTAC 901 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTATAATGTT GTTAAAGATG AGGAATATTG TGGAGAAATT AAAGTTGGTC TCACCTTTAC 225 TCCTGAGGCA AGTTACTTTC TAAAATTTTA TTGATTTATA AAAAAAAAAA AAAAAAAGGT 841 ||||||| TCCTGAG... .......... .......... .......... .......... .......... 232 TATGCCTCAA TCCCGAGCTA ACAAGTTCAG ATTGGCTATA TGAATAAAGG AACTCGTAAC 781 .......... .......... .......... .......... .......... .......... 232 ATGCAAGTAT AATAGGTATT CTATGTGCAT GATATATTTT GCTATGTTTT TGTAGGAATA 721 ||||| .......... .......... .......... .......... .......... .....GAATA 237 TTCTGAGAGG GAGTATGAAG AAGAGAACCT TGGTGGATGG AAAGAGTCTT CTTATTGATG 661 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTGAGAGG GAGTATGAAG AAGAGAACCT TGGTGGATGG AAAGAGTCTT CTTATTGATG 297 TGAAGCATTA CTCGACTGAT CAATTTGTTC TTGCTTAAAT TATGAACTTA TCTTACCCGT 601 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAGCATTA CTCGACTGAT CAATTTGTTC TTGCTTAAAT TATGAACTTA TCTTACCCGT 357 TATAACATTT TCAAGTGTTA AAAGTGTGGA TTTCATATAG TAAAAAAGAA AAGAGCTATT 541 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATAACATTT TCAAGTGTTA AAAGTGTGGA TTTCATATAG TAAAAAAGAA AAGAGCTATT 417 TTGAGTCTAT ACGGGTTACT GTAATAAAAA TGTTGGGATT TTCTTTTCAT TTTTCAAGTT 481 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGAGTCTAT ACGGGTTACT GTAATAAAAA TGTTGGGATT TTCTTTTCAT TTTTCAAGTT 477 AAATTATTTT ATCATATGCT ACAATGTAAG GTTTGTTATT ATGCAGAACA ACAATGTCAA 421 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATTATTTT ATCATATGCT ACAATGTAAG GTTTGTTATT ATGCAGAACA ACAATGTCAA 537 GTTATGAGAT AATCAAGTCA AATATCTAGA AATTATTGTG AAGAAA 375 |||||||||| |||||||||| |||||||||| |||||||||| |||||| GTTATGAGAT AATCAAGTCA AATATCTAGA AATTATTGTG AAGAAA 583 hqPGS_C08HBa0235H18.1-_SGN-E357091+ (2280 2164,1008 894,725 375) ******************************************************************************** EST sequence 885 +strand 416 n (File: SGN-E243226+) 1 TAAAGATGAG GAATATTGTG GAGAAATTAA AGTTGGTCTC ACCTTTACTC CTGAGGAATA 61 TTCTGAGAGG GAGTATGAAG AAGAGAACCT TGGTGGATGG AAAGAGTCTT CTTATTGATG 121 TGAAGCATTA CTCGACTGAT CAATTTGTTC TTGCTTAAAT TATGAACTTA TCTTACCCGT 181 TATAACATTT TCAAGTGTTA AAAGTGTGGA TTTCATATAG TAAAAAAGAA AAGAGCTATT 241 TTGAGTCTAT ACGGGTTACT GTAATAAAAA TGTTGGGATT TTCTTTTCAT TTTTCAAGTT 301 AAATTATTTT ATCATATGCT ACAATGTAAG GTTTGTTATT ATGCAGAACA ACAATGTCAA 361 GTTATGAGAT AATCAAGTCA AATATCTAGA AAAAAAAAAA AAAAAAAAAA AAAAAA Predicted gene structure (within gDNA segment 1548 to 1): Exon 1 948 894 ( 55 n); cDNA 1 55 ( 55 n); score: 1.000 Intron 1 893 726 ( 168 n); Pd: 0.999 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 725 389 ( 337 n); cDNA 56 392 ( 337 n); score: 1.000 PPA cDNA 393 416 MATCH C08HBa0235H18.1- SGN-E243226+ 1.000 392 0.942 C PGS_C08HBa0235H18.1-_SGN-E243226+ (948 894,725 389) Alignment (genomic DNA sequence = upper lines): TAAAGATGAG GAATATTGTG GAGAAATTAA AGTTGGTCTC ACCTTTACTC CTGAGGCAAG 889 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| TAAAGATGAG GAATATTGTG GAGAAATTAA AGTTGGTCTC ACCTTTACTC CTGAG..... 55 TTACTTTCTA AAATTTTATT GATTTATAAA AAAAAAAAAA AAAAAGGTTA TGCCTCAATC 829 .......... .......... .......... .......... .......... .......... 55 CCGAGCTAAC AAGTTCAGAT TGGCTATATG AATAAAGGAA CTCGTAACAT GCAAGTATAA 769 .......... .......... .......... .......... .......... .......... 55 TAGGTATTCT ATGTGCATGA TATATTTTGC TATGTTTTTG TAGGAATATT CTGAGAGGGA 709 ||||||| |||||||||| .......... .......... .......... .......... ...GAATATT CTGAGAGGGA 72 GTATGAAGAA GAGAACCTTG GTGGATGGAA AGAGTCTTCT TATTGATGTG AAGCATTACT 649 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTATGAAGAA GAGAACCTTG GTGGATGGAA AGAGTCTTCT TATTGATGTG AAGCATTACT 132 CGACTGATCA ATTTGTTCTT GCTTAAATTA TGAACTTATC TTACCCGTTA TAACATTTTC 589 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGACTGATCA ATTTGTTCTT GCTTAAATTA TGAACTTATC TTACCCGTTA TAACATTTTC 192 AAGTGTTAAA AGTGTGGATT TCATATAGTA AAAAAGAAAA GAGCTATTTT GAGTCTATAC 529 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTGTTAAA AGTGTGGATT TCATATAGTA AAAAAGAAAA GAGCTATTTT GAGTCTATAC 252 GGGTTACTGT AATAAAAATG TTGGGATTTT CTTTTCATTT TTCAAGTTAA ATTATTTTAT 469 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGTTACTGT AATAAAAATG TTGGGATTTT CTTTTCATTT TTCAAGTTAA ATTATTTTAT 312 CATATGCTAC AATGTAAGGT TTGTTATTAT GCAGAACAAC AATGTCAAGT TATGAGATAA 409 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATATGCTAC AATGTAAGGT TTGTTATTAT GCAGAACAAC AATGTCAAGT TATGAGATAA 372 TCAAGTCAAA TATCTAGAAA 389 |||||||||| |||||||||| TCAAGTCAAA TATCTAGAAA 392 hqPGS_C08HBa0235H18.1-_SGN-E243226+ (948 894,725 389) ******************************************************************************** EST sequence 944 +strand 574 n (File: SGN-E309390+) 1 TGAACCAGAA TGGAATGAAA CATTTGTTTT CTCCATTTCT GAGGATGCTG AAGAACTCTT 61 CTTGAAGATA ATGGACAGTG ATTCTATCGG CGAGGACGAT ATTGTTGGGG AAGCTAAGAT 121 ACCAATTGAA CCAGTTTTTT CAGAAGGGAG CATCCCAATA ACATGTTATA ATGTTGTTAA 181 AGATGAGGAA TATTGTGGAG AAATTAAAGT TGGTCTCACC TTTACTCCTG AGGAATATTC 241 TGAGAGGGAG TATGAAGAAG AGAACCTTGG TGGATGGAAA GAGTCTTCTT ATTGATGTGA 301 AGCATTACTC GACTGATCAA TTTGTTCTTG CTTAAATTAT GAACTTATCT TACCCGTTAT 361 AACATTTTCA AGTGTTAAAA GTGTGGATTT CATATAGTAA AAAAGAAAAG AGCTATTTTG 421 AGTCTATACG GGTTACTGTA ATAAAAATGT TGGGATTTTC TTTTCATTTT TCAAGTTAAA 481 TTATTTTATC ATATGCTACA ATGTAAGGTT TGTTATTATG CAGAACAACA ATGTCAAGTT 541 ATGAGATAAT CAAGTCAAAA AAAAAAAAAA AAAA Predicted gene structure (within gDNA segment 2880 to 1): Exon 1 2280 2164 ( 117 n); cDNA 1 117 ( 117 n); score: 1.000 Intron 1 2163 1009 (1155 n); Pd: 0.998 (s: 1.00), Pa: 0.997 (s: 1.00) Exon 2 1008 894 ( 115 n); cDNA 118 232 ( 115 n); score: 1.000 Intron 2 893 726 ( 168 n); Pd: 0.999 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 3 725 400 ( 326 n); cDNA 233 558 ( 326 n); score: 1.000 PPA cDNA 559 574 MATCH C08HBa0235H18.1- SGN-E309390+ 1.000 558 0.972 C PGS_C08HBa0235H18.1-_SGN-E309390+ (2280 2164,1008 894,725 400) Alignment (genomic DNA sequence = upper lines): TGAACCAGAA TGGAATGAAA CATTTGTTTT CTCCATTTCT GAGGATGCTG AAGAACTCTT 2221 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAACCAGAA TGGAATGAAA CATTTGTTTT CTCCATTTCT GAGGATGCTG AAGAACTCTT 60 CTTGAAGATA ATGGACAGTG ATTCTATCGG CGAGGACGAT ATTGTTGGGG AAGCTAAGTA 2161 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| CTTGAAGATA ATGGACAGTG ATTCTATCGG CGAGGACGAT ATTGTTGGGG AAGCTAA... 117 AGTATATCTA ATTAGAGGCG AATCTAAGAT TATACGTATT TTCTCTATAT TAACATAGTT 2101 .......... .......... .......... .......... .......... .......... 117 TGAGTTTGAT AGTACATGCA TCCATGACTT GTATATGTTG AGATAAATAG ACGTATATGA 2041 .......... .......... .......... .......... .......... .......... 117 CTTTAGATAA GAAGACGTGG AGGTCGAAAA TTAGGGTAGA AGGTTAGTAG TTAGTGAGCC 1981 .......... .......... .......... .......... .......... .......... 117 TGAGTGTTGT TGCACTTGTT ATTGGAGAGG AAGAGGGCTA GCCTAGTCTC TACTTCTCCT 1921 .......... .......... .......... .......... .......... .......... 117 TTTTAGTAGT AGTATTTTGT ATATCGCGTA GTTTCCTTTC TTTAATGATT ATTACAATCA 1861 .......... .......... .......... .......... .......... .......... 117 GTTGCTTCAT TTGATTTGTA TCTTGCTATT TTGTCGTTTT ATTTACTTGC ACCATGCTTT 1801 .......... .......... .......... .......... .......... .......... 117 TTCTTTTCTT TTCTTTTGAG TTCAGGGTCC TTCGTGAACA ACCTGCAAAG GTAGGGGTAT 1741 .......... .......... .......... .......... .......... .......... 117 GTTCAGCGTA CATCGATATC CTACCTTCCC AATATCCAAC TTGTGAAATT ACACTGAATA 1681 .......... .......... .......... .......... .......... .......... 117 TATAGTTATT TTTGTGGTTG TTGTAGTATA CATCTACTTT CTAGTGGTGT TATACAAACC 1621 .......... .......... .......... .......... .......... .......... 117 ATGGTTTAAA CGGTTGAGAT TATTAGTTCA TGGAGTCGAA TAAGCATTTG CCTAAAACAG 1561 .......... .......... .......... .......... .......... .......... 117 TTGAGATTAT TAGTTCATGG AGTCGAATAA GCATTTCCCT AAAACAGTTG AGATTATTAG 1501 .......... .......... .......... .......... .......... .......... 117 TTCATGGAGT CGAATAAGCA TTTGCCTAAA ACAGTTGAGA TTATTAGTTC ATGGAGTCGA 1441 .......... .......... .......... .......... .......... .......... 117 ATAAGCATTT GCCTAAAACA GTTGAGATTA TTAGTTCATG GAGTCGAATA AGCATTTGCC 1381 .......... .......... .......... .......... .......... .......... 117 TAAAACAGTT GAGATTATTA GTTCATGGAG TCGAATAAGC ATTTGCCTAA AACAGTTGAG 1321 .......... .......... .......... .......... .......... .......... 117 ATTATTAGTT CATGGAGTCG AATAAGCATT TGCCTAAAAC AGTTGAGATT ATTAGTTCAT 1261 .......... .......... .......... .......... .......... .......... 117 GGAGTCGAAT AAGCATTTGC CTAAAACAGT TGAGATTATT AGTTCATGGA GTCGAATAAG 1201 .......... .......... .......... .......... .......... .......... 117 CATTTGCCTA AAACAGTTGA GATTATTAGT TCATGGAGTC GAATAAGCAT TTACCTATCA 1141 .......... .......... .......... .......... .......... .......... 117 GAGACGAATC TAAGATTTAT ACAATTTCTG TATATACAAT TTCTGTATAT ATATATATAT 1081 .......... .......... .......... .......... .......... .......... 117 ATATATATGC AAACATAATC TGAGTTTGCT AGTATTGGTT TTGAGATATG TTCAATAATA 1021 .......... .......... .......... .......... .......... .......... 117 TGTTACTTGC AGGATACCAA TTGAACCAGT TTTTTCAGAA GGGAGCATCC CAATAACATG 961 |||||||| |||||||||| |||||||||| |||||||||| |||||||||| .......... ..GATACCAA TTGAACCAGT TTTTTCAGAA GGGAGCATCC CAATAACATG 165 TTATAATGTT GTTAAAGATG AGGAATATTG TGGAGAAATT AAAGTTGGTC TCACCTTTAC 901 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTATAATGTT GTTAAAGATG AGGAATATTG TGGAGAAATT AAAGTTGGTC TCACCTTTAC 225 TCCTGAGGCA AGTTACTTTC TAAAATTTTA TTGATTTATA AAAAAAAAAA AAAAAAAGGT 841 ||||||| TCCTGAG... .......... .......... .......... .......... .......... 232 TATGCCTCAA TCCCGAGCTA ACAAGTTCAG ATTGGCTATA TGAATAAAGG AACTCGTAAC 781 .......... .......... .......... .......... .......... .......... 232 ATGCAAGTAT AATAGGTATT CTATGTGCAT GATATATTTT GCTATGTTTT TGTAGGAATA 721 ||||| .......... .......... .......... .......... .......... .....GAATA 237 TTCTGAGAGG GAGTATGAAG AAGAGAACCT TGGTGGATGG AAAGAGTCTT CTTATTGATG 661 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTGAGAGG GAGTATGAAG AAGAGAACCT TGGTGGATGG AAAGAGTCTT CTTATTGATG 297 TGAAGCATTA CTCGACTGAT CAATTTGTTC TTGCTTAAAT TATGAACTTA TCTTACCCGT 601 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAGCATTA CTCGACTGAT CAATTTGTTC TTGCTTAAAT TATGAACTTA TCTTACCCGT 357 TATAACATTT TCAAGTGTTA AAAGTGTGGA TTTCATATAG TAAAAAAGAA AAGAGCTATT 541 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATAACATTT TCAAGTGTTA AAAGTGTGGA TTTCATATAG TAAAAAAGAA AAGAGCTATT 417 TTGAGTCTAT ACGGGTTACT GTAATAAAAA TGTTGGGATT TTCTTTTCAT TTTTCAAGTT 481 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGAGTCTAT ACGGGTTACT GTAATAAAAA TGTTGGGATT TTCTTTTCAT TTTTCAAGTT 477 AAATTATTTT ATCATATGCT ACAATGTAAG GTTTGTTATT ATGCAGAACA ACAATGTCAA 421 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATTATTTT ATCATATGCT ACAATGTAAG GTTTGTTATT ATGCAGAACA ACAATGTCAA 537 GTTATGAGAT AATCAAGTCA A 400 |||||||||| |||||||||| | GTTATGAGAT AATCAAGTCA A 558 hqPGS_C08HBa0235H18.1-_SGN-E309390+ (2280 2164,1008 894,725 400) ******************************************************************************** EST sequence 668 +strand 687 n (File: SGN-E372833+) 1 AAAAGAAAAC GATCTCTGTC CGAAAATTCG TGCGAGAATC TGTTTTTTTT TCCTGGGAAT 61 CTGCTAAGAG TTTGATTGAA AATGGTACGA GGAAAACTTG TAGTTCAACT TGTTGGAGCT 121 AAAGGCCTTG AAAACACTGA TTTTCTCAAT GATATGGATC CATATGTGAT CTTAACTTAT 181 AGATCTCAGG AGAAAAAGAG TACTGTTGCA TCAGGGAAGG GATGTGAACC AGAATGGAAT 241 GAAACATTTG TTTTCTCCAT TTCTGAGGAT GCTGAAGAAC TCTTCTTGAA GATAATGGAC 301 AGTGATTCTA TCGGCGAGGA CGATATTGTT GGGGAAGCTA AGATACCAAT TGAACCAGTT 361 TTTTCAGAAG GGAGCATCCC AATAACATGT TATAATGTTG TTAAAGATGA GGAATATTGT 421 GGAGAAATTA AAGTTGGTCT CACCTTTACT CCTGAGGAAT ATTCTGAGAG GGAGTATGAA 481 GAAGAGAACC TTGGTGGATG GAAAGAGTCT TCTTATTGAT GTGAAGCATT ACTCGACTGA 541 TCAATTTGTT CTTGCTTAAA TTATGAACTT ATCTTACCCG TTATAACATT TTCAAGTGTT 601 AAAAGTGTGG ATTTCATATA GTAAAAAAGA AAAGAGCTAT TTTGAGTCTA TACGGGTTAC 661 TGTAATAAAA ATGTTGGGAT TTTCTTT Predicted gene structure (within gDNA segment 3714 to 1): Exon 1 3114 2967 ( 148 n); cDNA 1 148 ( 148 n); score: 1.000 Intron 1 2966 2475 ( 492 n); Pd: 0.999 (s: 1.00), Pa: 0.999 (s: 1.00) Exon 2 2474 2409 ( 66 n); cDNA 149 214 ( 66 n); score: 1.000 Intron 2 2408 2291 ( 118 n); Pd: 0.991 (s: 1.00), Pa: 0.989 (s: 1.00) Exon 3 2290 2164 ( 127 n); cDNA 215 341 ( 127 n); score: 1.000 Intron 3 2163 1009 (1155 n); Pd: 0.998 (s: 1.00), Pa: 0.997 (s: 1.00) Exon 4 1008 894 ( 115 n); cDNA 342 456 ( 115 n); score: 1.000 Intron 4 893 726 ( 168 n); Pd: 0.999 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 5 725 495 ( 231 n); cDNA 457 687 ( 231 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E372833+ 1.000 687 1.000 C PGS_C08HBa0235H18.1-_SGN-E372833+ (3114 2967,2474 2409,2290 2164,1008 894,725 495) Alignment (genomic DNA sequence = upper lines): AAAAGAAAAC GATCTCTGTC CGAAAATTCG TGCGAGAATC TGTTTTTTTT TCCTGGGAAT 3055 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAGAAAAC GATCTCTGTC CGAAAATTCG TGCGAGAATC TGTTTTTTTT TCCTGGGAAT 60 CTGCTAAGAG TTTGATTGAA AATGGTACGA GGAAAACTTG TAGTTCAACT TGTTGGAGCT 2995 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGCTAAGAG TTTGATTGAA AATGGTACGA GGAAAACTTG TAGTTCAACT TGTTGGAGCT 120 AAAGGCCTTG AAAACACTGA TTTTCTCAGT AAGTTTTTTG TTTTTTTTTC TAATTTATTT 2935 |||||||||| |||||||||| |||||||| AAAGGCCTTG AAAACACTGA TTTTCTCA.. .......... .......... .......... 148 GTTTTGATCT GATCAGATTA ATGTATAGAT CTCTTTTTTC TTTCGATTAC ATTTGATGTT 2875 .......... .......... .......... .......... .......... .......... 148 TTCTTAATCA ACCTAATTTT CGATTGTTAC TTATGTGAAT TAGAGGTTGA TCTACATGTA 2815 .......... .......... .......... .......... .......... .......... 148 ATTTATGTGT TCACACAACA CCTGTTTGAA TGTGCGTTTT ATTTAGGAAA ATAGAGAATT 2755 .......... .......... .......... .......... .......... .......... 148 ATTTGAAGAT CGGATCAAAT TTTCATGATC AAACAGATAT TTGTCAAAAT TCATGGCCAA 2695 .......... .......... .......... .......... .......... .......... 148 ACCTTATCAA TGTATATTAA TTTGACTTCG TGGTAAACTT TAAATTTTGA ATCAAAGTAT 2635 .......... .......... .......... .......... .......... .......... 148 GTGAAGTTGA CATTTAGGTC TATGCCTAGT CAAACGATGT CAAATAAAAT AGAATCGAGG 2575 .......... .......... .......... .......... .......... .......... 148 AATATGAATC AAAAATCGAT AATCATCTTG GCTAATTTGA TTGATACTCT GTATTTTATT 2515 .......... .......... .......... .......... .......... .......... 148 TTATTTTTTA ATTTAAAAAA TGTTATTTTG TGTGATACAG ATGATATGGA TCCATATGTG 2455 |||||||||| |||||||||| .......... .......... .......... .......... ATGATATGGA TCCATATGTG 168 ATCTTAACTT ATAGATCTCA GGAGAAAAAG AGTACTGTTG CATCAGGTAC ATTTGTTAAT 2395 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ATCTTAACTT ATAGATCTCA GGAGAAAAAG AGTACTGTTG CATCAG.... .......... 214 AATCTTTGGT TAATTATTAC TTAGTTATTA GTTACCTATG TTTTTTTTAA GAAAAATGAA 2335 .......... .......... .......... .......... .......... .......... 214 ATGAAGTTTG ATCAATCGAT ATTTATAATG TTAAATTTTC ATAGGGAAGG GATGTGAACC 2275 |||||| |||||||||| .......... .......... .......... .......... ....GGAAGG GATGTGAACC 230 AGAATGGAAT GAAACATTTG TTTTCTCCAT TTCTGAGGAT GCTGAAGAAC TCTTCTTGAA 2215 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAATGGAAT GAAACATTTG TTTTCTCCAT TTCTGAGGAT GCTGAAGAAC TCTTCTTGAA 290 GATAATGGAC AGTGATTCTA TCGGCGAGGA CGATATTGTT GGGGAAGCTA AGTAAGTATA 2155 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | GATAATGGAC AGTGATTCTA TCGGCGAGGA CGATATTGTT GGGGAAGCTA A......... 341 TCTAATTAGA GGCGAATCTA AGATTATACG TATTTTCTCT ATATTAACAT AGTTTGAGTT 2095 .......... .......... .......... .......... .......... .......... 341 TGATAGTACA TGCATCCATG ACTTGTATAT GTTGAGATAA ATAGACGTAT ATGACTTTAG 2035 .......... .......... .......... .......... .......... .......... 341 ATAAGAAGAC GTGGAGGTCG AAAATTAGGG TAGAAGGTTA GTAGTTAGTG AGCCTGAGTG 1975 .......... .......... .......... .......... .......... .......... 341 TTGTTGCACT TGTTATTGGA GAGGAAGAGG GCTAGCCTAG TCTCTACTTC TCCTTTTTAG 1915 .......... .......... .......... .......... .......... .......... 341 TAGTAGTATT TTGTATATCG CGTAGTTTCC TTTCTTTAAT GATTATTACA ATCAGTTGCT 1855 .......... .......... .......... .......... .......... .......... 341 TCATTTGATT TGTATCTTGC TATTTTGTCG TTTTATTTAC TTGCACCATG CTTTTTCTTT 1795 .......... .......... .......... .......... .......... .......... 341 TCTTTTCTTT TGAGTTCAGG GTCCTTCGTG AACAACCTGC AAAGGTAGGG GTATGTTCAG 1735 .......... .......... .......... .......... .......... .......... 341 CGTACATCGA TATCCTACCT TCCCAATATC CAACTTGTGA AATTACACTG AATATATAGT 1675 .......... .......... .......... .......... .......... .......... 341 TATTTTTGTG GTTGTTGTAG TATACATCTA CTTTCTAGTG GTGTTATACA AACCATGGTT 1615 .......... .......... .......... .......... .......... .......... 341 TAAACGGTTG AGATTATTAG TTCATGGAGT CGAATAAGCA TTTGCCTAAA ACAGTTGAGA 1555 .......... .......... .......... .......... .......... .......... 341 TTATTAGTTC ATGGAGTCGA ATAAGCATTT CCCTAAAACA GTTGAGATTA TTAGTTCATG 1495 .......... .......... .......... .......... .......... .......... 341 GAGTCGAATA AGCATTTGCC TAAAACAGTT GAGATTATTA GTTCATGGAG TCGAATAAGC 1435 .......... .......... .......... .......... .......... .......... 341 ATTTGCCTAA AACAGTTGAG ATTATTAGTT CATGGAGTCG AATAAGCATT TGCCTAAAAC 1375 .......... .......... .......... .......... .......... .......... 341 AGTTGAGATT ATTAGTTCAT GGAGTCGAAT AAGCATTTGC CTAAAACAGT TGAGATTATT 1315 .......... .......... .......... .......... .......... .......... 341 AGTTCATGGA GTCGAATAAG CATTTGCCTA AAACAGTTGA GATTATTAGT TCATGGAGTC 1255 .......... .......... .......... .......... .......... .......... 341 GAATAAGCAT TTGCCTAAAA CAGTTGAGAT TATTAGTTCA TGGAGTCGAA TAAGCATTTG 1195 .......... .......... .......... .......... .......... .......... 341 CCTAAAACAG TTGAGATTAT TAGTTCATGG AGTCGAATAA GCATTTACCT ATCAGAGACG 1135 .......... .......... .......... .......... .......... .......... 341 AATCTAAGAT TTATACAATT TCTGTATATA CAATTTCTGT ATATATATAT ATATATATAT 1075 .......... .......... .......... .......... .......... .......... 341 ATGCAAACAT AATCTGAGTT TGCTAGTATT GGTTTTGAGA TATGTTCAAT AATATGTTAC 1015 .......... .......... .......... .......... .......... .......... 341 TTGCAGGATA CCAATTGAAC CAGTTTTTTC AGAAGGGAGC ATCCCAATAA CATGTTATAA 955 |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ......GATA CCAATTGAAC CAGTTTTTTC AGAAGGGAGC ATCCCAATAA CATGTTATAA 395 TGTTGTTAAA GATGAGGAAT ATTGTGGAGA AATTAAAGTT GGTCTCACCT TTACTCCTGA 895 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTGTTAAA GATGAGGAAT ATTGTGGAGA AATTAAAGTT GGTCTCACCT TTACTCCTGA 455 GGCAAGTTAC TTTCTAAAAT TTTATTGATT TATAAAAAAA AAAAAAAAAA AGGTTATGCC 835 | G......... .......... .......... .......... .......... .......... 456 TCAATCCCGA GCTAACAAGT TCAGATTGGC TATATGAATA AAGGAACTCG TAACATGCAA 775 .......... .......... .......... .......... .......... .......... 456 GTATAATAGG TATTCTATGT GCATGATATA TTTTGCTATG TTTTTGTAGG AATATTCTGA 715 | |||||||||| .......... .......... .......... .......... .........G AATATTCTGA 467 GAGGGAGTAT GAAGAAGAGA ACCTTGGTGG ATGGAAAGAG TCTTCTTATT GATGTGAAGC 655 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGGGAGTAT GAAGAAGAGA ACCTTGGTGG ATGGAAAGAG TCTTCTTATT GATGTGAAGC 527 ATTACTCGAC TGATCAATTT GTTCTTGCTT AAATTATGAA CTTATCTTAC CCGTTATAAC 595 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTACTCGAC TGATCAATTT GTTCTTGCTT AAATTATGAA CTTATCTTAC CCGTTATAAC 587 ATTTTCAAGT GTTAAAAGTG TGGATTTCAT ATAGTAAAAA AGAAAAGAGC TATTTTGAGT 535 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTTCAAGT GTTAAAAGTG TGGATTTCAT ATAGTAAAAA AGAAAAGAGC TATTTTGAGT 647 CTATACGGGT TACTGTAATA AAAATGTTGG GATTTTCTTT 495 |||||||||| |||||||||| |||||||||| |||||||||| CTATACGGGT TACTGTAATA AAAATGTTGG GATTTTCTTT 687 hqPGS_C08HBa0235H18.1-_SGN-E372833+ (3114 2967,2474 2409,2290 2164,1008 894,725 495) ******************************************************************************** EST sequence 791 +strand 554 n (File: SGN-E308050+) 1 ACGATCTCTG TCCGAAAATT CGTGCGAGAA TCTGTTTTTT TTTCCTGGGA ATCTGCTAAG 61 AGTTTGATTG AAAATGGTAC GAGGAAAACT TGTAGTTCAA CTTGTTGGAG CTAAAGGCCT 121 TGAAAACACT GATTTTCTCA ATGATATGGA TCCATATGTG ATCTTAACTT ATAGATCTCA 181 GGAGAAAAAG AGTACTGTTG CATCAGGGAA GGGATGTGAA CCAGAATGGA ATGAAACATT 241 TGTTTTCTCC ATTTCTGAGG ATGCTGAAGA ACTCTTCTTG AAGATAATGG ACAGTGATTC 301 TATCGGCGAG GACGATATTG TTGGGGAAGC TAAGATACCA ATTGAACCAG TTTTTTCAGA 361 AGGGAGCATC CCAATAACAT GTTATAATGT TGTTAAAGAT GAGGAATATT GTGGAGAAAT 421 TAAAGTTGGT CTCACCTTTA CTCCTGAGGA ATATTCTGAG AGGGAGTATG AAGAAGAGAA 481 CCTTGGTGGA TGGAAAGAGT CTTCTTATTG ATGTGAAGCA TTACTCGACT GATCAATTTG 541 TTCTTGCTTA AATT Predicted gene structure (within gDNA segment 3706 to 10): Exon 1 3106 2967 ( 140 n); cDNA 1 140 ( 140 n); score: 1.000 Intron 1 2966 2475 ( 492 n); Pd: 0.999 (s: 1.00), Pa: 0.999 (s: 1.00) Exon 2 2474 2409 ( 66 n); cDNA 141 206 ( 66 n); score: 1.000 Intron 2 2408 2291 ( 118 n); Pd: 0.991 (s: 1.00), Pa: 0.989 (s: 1.00) Exon 3 2290 2164 ( 127 n); cDNA 207 333 ( 127 n); score: 1.000 Intron 3 2163 1009 (1155 n); Pd: 0.998 (s: 1.00), Pa: 0.997 (s: 1.00) Exon 4 1008 894 ( 115 n); cDNA 334 448 ( 115 n); score: 1.000 Intron 4 893 726 ( 168 n); Pd: 0.999 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 5 725 620 ( 106 n); cDNA 449 554 ( 106 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E308050+ 1.000 554 1.000 C PGS_C08HBa0235H18.1-_SGN-E308050+ (3106 2967,2474 2409,2290 2164,1008 894,725 620) Alignment (genomic DNA sequence = upper lines): ACGATCTCTG TCCGAAAATT CGTGCGAGAA TCTGTTTTTT TTTCCTGGGA ATCTGCTAAG 3047 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACGATCTCTG TCCGAAAATT CGTGCGAGAA TCTGTTTTTT TTTCCTGGGA ATCTGCTAAG 60 AGTTTGATTG AAAATGGTAC GAGGAAAACT TGTAGTTCAA CTTGTTGGAG CTAAAGGCCT 2987 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTTGATTG AAAATGGTAC GAGGAAAACT TGTAGTTCAA CTTGTTGGAG CTAAAGGCCT 120 TGAAAACACT GATTTTCTCA GTAAGTTTTT TGTTTTTTTT TCTAATTTAT TTGTTTTGAT 2927 |||||||||| |||||||||| TGAAAACACT GATTTTCTCA .......... .......... .......... .......... 140 CTGATCAGAT TAATGTATAG ATCTCTTTTT TCTTTCGATT ACATTTGATG TTTTCTTAAT 2867 .......... .......... .......... .......... .......... .......... 140 CAACCTAATT TTCGATTGTT ACTTATGTGA ATTAGAGGTT GATCTACATG TAATTTATGT 2807 .......... .......... .......... .......... .......... .......... 140 GTTCACACAA CACCTGTTTG AATGTGCGTT TTATTTAGGA AAATAGAGAA TTATTTGAAG 2747 .......... .......... .......... .......... .......... .......... 140 ATCGGATCAA ATTTTCATGA TCAAACAGAT ATTTGTCAAA ATTCATGGCC AAACCTTATC 2687 .......... .......... .......... .......... .......... .......... 140 AATGTATATT AATTTGACTT CGTGGTAAAC TTTAAATTTT GAATCAAAGT ATGTGAAGTT 2627 .......... .......... .......... .......... .......... .......... 140 GACATTTAGG TCTATGCCTA GTCAAACGAT GTCAAATAAA ATAGAATCGA GGAATATGAA 2567 .......... .......... .......... .......... .......... .......... 140 TCAAAAATCG ATAATCATCT TGGCTAATTT GATTGATACT CTGTATTTTA TTTTATTTTT 2507 .......... .......... .......... .......... .......... .......... 140 TAATTTAAAA AATGTTATTT TGTGTGATAC AGATGATATG GATCCATATG TGATCTTAAC 2447 |||||||| |||||||||| |||||||||| .......... .......... .......... ..ATGATATG GATCCATATG TGATCTTAAC 168 TTATAGATCT CAGGAGAAAA AGAGTACTGT TGCATCAGGT ACATTTGTTA ATAATCTTTG 2387 |||||||||| |||||||||| |||||||||| |||||||| TTATAGATCT CAGGAGAAAA AGAGTACTGT TGCATCAG.. .......... .......... 206 GTTAATTATT ACTTAGTTAT TAGTTACCTA TGTTTTTTTT AAGAAAAATG AAATGAAGTT 2327 .......... .......... .......... .......... .......... .......... 206 TGATCAATCG ATATTTATAA TGTTAAATTT TCATAGGGAA GGGATGTGAA CCAGAATGGA 2267 |||| |||||||||| |||||||||| .......... .......... .......... ......GGAA GGGATGTGAA CCAGAATGGA 230 ATGAAACATT TGTTTTCTCC ATTTCTGAGG ATGCTGAAGA ACTCTTCTTG AAGATAATGG 2207 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGAAACATT TGTTTTCTCC ATTTCTGAGG ATGCTGAAGA ACTCTTCTTG AAGATAATGG 290 ACAGTGATTC TATCGGCGAG GACGATATTG TTGGGGAAGC TAAGTAAGTA TATCTAATTA 2147 |||||||||| |||||||||| |||||||||| |||||||||| ||| ACAGTGATTC TATCGGCGAG GACGATATTG TTGGGGAAGC TAA....... .......... 333 GAGGCGAATC TAAGATTATA CGTATTTTCT CTATATTAAC ATAGTTTGAG TTTGATAGTA 2087 .......... .......... .......... .......... .......... .......... 333 CATGCATCCA TGACTTGTAT ATGTTGAGAT AAATAGACGT ATATGACTTT AGATAAGAAG 2027 .......... .......... .......... .......... .......... .......... 333 ACGTGGAGGT CGAAAATTAG GGTAGAAGGT TAGTAGTTAG TGAGCCTGAG TGTTGTTGCA 1967 .......... .......... .......... .......... .......... .......... 333 CTTGTTATTG GAGAGGAAGA GGGCTAGCCT AGTCTCTACT TCTCCTTTTT AGTAGTAGTA 1907 .......... .......... .......... .......... .......... .......... 333 TTTTGTATAT CGCGTAGTTT CCTTTCTTTA ATGATTATTA CAATCAGTTG CTTCATTTGA 1847 .......... .......... .......... .......... .......... .......... 333 TTTGTATCTT GCTATTTTGT CGTTTTATTT ACTTGCACCA TGCTTTTTCT TTTCTTTTCT 1787 .......... .......... .......... .......... .......... .......... 333 TTTGAGTTCA GGGTCCTTCG TGAACAACCT GCAAAGGTAG GGGTATGTTC AGCGTACATC 1727 .......... .......... .......... .......... .......... .......... 333 GATATCCTAC CTTCCCAATA TCCAACTTGT GAAATTACAC TGAATATATA GTTATTTTTG 1667 .......... .......... .......... .......... .......... .......... 333 TGGTTGTTGT AGTATACATC TACTTTCTAG TGGTGTTATA CAAACCATGG TTTAAACGGT 1607 .......... .......... .......... .......... .......... .......... 333 TGAGATTATT AGTTCATGGA GTCGAATAAG CATTTGCCTA AAACAGTTGA GATTATTAGT 1547 .......... .......... .......... .......... .......... .......... 333 TCATGGAGTC GAATAAGCAT TTCCCTAAAA CAGTTGAGAT TATTAGTTCA TGGAGTCGAA 1487 .......... .......... .......... .......... .......... .......... 333 TAAGCATTTG CCTAAAACAG TTGAGATTAT TAGTTCATGG AGTCGAATAA GCATTTGCCT 1427 .......... .......... .......... .......... .......... .......... 333 AAAACAGTTG AGATTATTAG TTCATGGAGT CGAATAAGCA TTTGCCTAAA ACAGTTGAGA 1367 .......... .......... .......... .......... .......... .......... 333 TTATTAGTTC ATGGAGTCGA ATAAGCATTT GCCTAAAACA GTTGAGATTA TTAGTTCATG 1307 .......... .......... .......... .......... .......... .......... 333 GAGTCGAATA AGCATTTGCC TAAAACAGTT GAGATTATTA GTTCATGGAG TCGAATAAGC 1247 .......... .......... .......... .......... .......... .......... 333 ATTTGCCTAA AACAGTTGAG ATTATTAGTT CATGGAGTCG AATAAGCATT TGCCTAAAAC 1187 .......... .......... .......... .......... .......... .......... 333 AGTTGAGATT ATTAGTTCAT GGAGTCGAAT AAGCATTTAC CTATCAGAGA CGAATCTAAG 1127 .......... .......... .......... .......... .......... .......... 333 ATTTATACAA TTTCTGTATA TACAATTTCT GTATATATAT ATATATATAT ATATGCAAAC 1067 .......... .......... .......... .......... .......... .......... 333 ATAATCTGAG TTTGCTAGTA TTGGTTTTGA GATATGTTCA ATAATATGTT ACTTGCAGGA 1007 || .......... .......... .......... .......... .......... ........GA 335 TACCAATTGA ACCAGTTTTT TCAGAAGGGA GCATCCCAAT AACATGTTAT AATGTTGTTA 947 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACCAATTGA ACCAGTTTTT TCAGAAGGGA GCATCCCAAT AACATGTTAT AATGTTGTTA 395 AAGATGAGGA ATATTGTGGA GAAATTAAAG TTGGTCTCAC CTTTACTCCT GAGGCAAGTT 887 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| AAGATGAGGA ATATTGTGGA GAAATTAAAG TTGGTCTCAC CTTTACTCCT GAG....... 448 ACTTTCTAAA ATTTTATTGA TTTATAAAAA AAAAAAAAAA AAAGGTTATG CCTCAATCCC 827 .......... .......... .......... .......... .......... .......... 448 GAGCTAACAA GTTCAGATTG GCTATATGAA TAAAGGAACT CGTAACATGC AAGTATAATA 767 .......... .......... .......... .......... .......... .......... 448 GGTATTCTAT GTGCATGATA TATTTTGCTA TGTTTTTGTA GGAATATTCT GAGAGGGAGT 707 ||||||||| |||||||||| .......... .......... .......... .......... .GAATATTCT GAGAGGGAGT 467 ATGAAGAAGA GAACCTTGGT GGATGGAAAG AGTCTTCTTA TTGATGTGAA GCATTACTCG 647 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGAAGAAGA GAACCTTGGT GGATGGAAAG AGTCTTCTTA TTGATGTGAA GCATTACTCG 527 ACTGATCAAT TTGTTCTTGC TTAAATT 620 |||||||||| |||||||||| ||||||| ACTGATCAAT TTGTTCTTGC TTAAATT 554 hqPGS_C08HBa0235H18.1-_SGN-E308050+ (3106 2967,2474 2409,2290 2164,1008 894,725 620) ******************************************************************************** EST sequence 792 +strand 542 n (File: SGN-E336643+) 1 AAAAGAAAAC GATCTCTGTC CGAAAATTCG TGCGAGAATC TGTTTTTTTT TCCTGGGAAT 61 CTGCTAAGAG TTTGATTGAA AATGGTACGA GGAAAACTTG TAGTTCAACT TGTTGGAGCT 121 AAAGGCCTTG AAAACACTGA TTTTCTCAAT GATATGGATC CATATGTGAT CTTAACTTAT 181 AGATCTCAGG AGAAAAAGAG TACTGTTGCA TCAGGGAAGG GATGTGAACC AGAATGGAAT 241 GAAACATTTG TTTTCTCCAT TTCTGAGGAT GCTGAAGAAC TCTTCTTGAA GATAATGGAC 301 AGTGATTCTA TCGGCGAGGA CGATATTGTT GGGGAAGCTA AGATACCAAT TGAACCAGTT 361 TTTTCAGAAG GGAGCATCCC AATAACATGT TATAATGTTG TTAAAGATGA GGAATATTGT 421 GGAGAAATTA AAGTTGGTCT CACCTTTACT CCTGAGGAAT ATTCTGAGAG GGAGTATGAA 481 GAAGAGAACC TTGGTGGATG GAAAAGAGTC TTCTTATTGA TGTGAAGCAT TACTCGACTG 541 AT Predicted gene structure (within gDNA segment 3714 to 31): Exon 1 3114 2967 ( 148 n); cDNA 1 148 ( 148 n); score: 1.000 Intron 1 2966 2475 ( 492 n); Pd: 0.999 (s: 1.00), Pa: 0.999 (s: 1.00) Exon 2 2474 2409 ( 66 n); cDNA 149 214 ( 66 n); score: 1.000 Intron 2 2408 2291 ( 118 n); Pd: 0.991 (s: 1.00), Pa: 0.989 (s: 1.00) Exon 3 2290 2164 ( 127 n); cDNA 215 341 ( 127 n); score: 1.000 Intron 3 2163 1009 (1155 n); Pd: 0.998 (s: 1.00), Pa: 0.997 (s: 1.00) Exon 4 1008 894 ( 115 n); cDNA 342 456 ( 115 n); score: 1.000 Intron 4 893 726 ( 168 n); Pd: 0.999 (s: 1.00), Pa: 1.000 (s: 0.95) Exon 5 725 641 ( 85 n); cDNA 457 542 ( 86 n); score: 0.971 MATCH C08HBa0235H18.1- SGN-E336643+ 0.995 541 0.998 C PGS_C08HBa0235H18.1-_SGN-E336643+ (3114 2967,2474 2409,2290 2164,1008 894,725 641) Alignment (genomic DNA sequence = upper lines): AAAAGAAAAC GATCTCTGTC CGAAAATTCG TGCGAGAATC TGTTTTTTTT TCCTGGGAAT 3055 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAGAAAAC GATCTCTGTC CGAAAATTCG TGCGAGAATC TGTTTTTTTT TCCTGGGAAT 60 CTGCTAAGAG TTTGATTGAA AATGGTACGA GGAAAACTTG TAGTTCAACT TGTTGGAGCT 2995 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGCTAAGAG TTTGATTGAA AATGGTACGA GGAAAACTTG TAGTTCAACT TGTTGGAGCT 120 AAAGGCCTTG AAAACACTGA TTTTCTCAGT AAGTTTTTTG TTTTTTTTTC TAATTTATTT 2935 |||||||||| |||||||||| |||||||| AAAGGCCTTG AAAACACTGA TTTTCTCA.. .......... .......... .......... 148 GTTTTGATCT GATCAGATTA ATGTATAGAT CTCTTTTTTC TTTCGATTAC ATTTGATGTT 2875 .......... .......... .......... .......... .......... .......... 148 TTCTTAATCA ACCTAATTTT CGATTGTTAC TTATGTGAAT TAGAGGTTGA TCTACATGTA 2815 .......... .......... .......... .......... .......... .......... 148 ATTTATGTGT TCACACAACA CCTGTTTGAA TGTGCGTTTT ATTTAGGAAA ATAGAGAATT 2755 .......... .......... .......... .......... .......... .......... 148 ATTTGAAGAT CGGATCAAAT TTTCATGATC AAACAGATAT TTGTCAAAAT TCATGGCCAA 2695 .......... .......... .......... .......... .......... .......... 148 ACCTTATCAA TGTATATTAA TTTGACTTCG TGGTAAACTT TAAATTTTGA ATCAAAGTAT 2635 .......... .......... .......... .......... .......... .......... 148 GTGAAGTTGA CATTTAGGTC TATGCCTAGT CAAACGATGT CAAATAAAAT AGAATCGAGG 2575 .......... .......... .......... .......... .......... .......... 148 AATATGAATC AAAAATCGAT AATCATCTTG GCTAATTTGA TTGATACTCT GTATTTTATT 2515 .......... .......... .......... .......... .......... .......... 148 TTATTTTTTA ATTTAAAAAA TGTTATTTTG TGTGATACAG ATGATATGGA TCCATATGTG 2455 |||||||||| |||||||||| .......... .......... .......... .......... ATGATATGGA TCCATATGTG 168 ATCTTAACTT ATAGATCTCA GGAGAAAAAG AGTACTGTTG CATCAGGTAC ATTTGTTAAT 2395 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ATCTTAACTT ATAGATCTCA GGAGAAAAAG AGTACTGTTG CATCAG.... .......... 214 AATCTTTGGT TAATTATTAC TTAGTTATTA GTTACCTATG TTTTTTTTAA GAAAAATGAA 2335 .......... .......... .......... .......... .......... .......... 214 ATGAAGTTTG ATCAATCGAT ATTTATAATG TTAAATTTTC ATAGGGAAGG GATGTGAACC 2275 |||||| |||||||||| .......... .......... .......... .......... ....GGAAGG GATGTGAACC 230 AGAATGGAAT GAAACATTTG TTTTCTCCAT TTCTGAGGAT GCTGAAGAAC TCTTCTTGAA 2215 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAATGGAAT GAAACATTTG TTTTCTCCAT TTCTGAGGAT GCTGAAGAAC TCTTCTTGAA 290 GATAATGGAC AGTGATTCTA TCGGCGAGGA CGATATTGTT GGGGAAGCTA AGTAAGTATA 2155 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | GATAATGGAC AGTGATTCTA TCGGCGAGGA CGATATTGTT GGGGAAGCTA A......... 341 TCTAATTAGA GGCGAATCTA AGATTATACG TATTTTCTCT ATATTAACAT AGTTTGAGTT 2095 .......... .......... .......... .......... .......... .......... 341 TGATAGTACA TGCATCCATG ACTTGTATAT GTTGAGATAA ATAGACGTAT ATGACTTTAG 2035 .......... .......... .......... .......... .......... .......... 341 ATAAGAAGAC GTGGAGGTCG AAAATTAGGG TAGAAGGTTA GTAGTTAGTG AGCCTGAGTG 1975 .......... .......... .......... .......... .......... .......... 341 TTGTTGCACT TGTTATTGGA GAGGAAGAGG GCTAGCCTAG TCTCTACTTC TCCTTTTTAG 1915 .......... .......... .......... .......... .......... .......... 341 TAGTAGTATT TTGTATATCG CGTAGTTTCC TTTCTTTAAT GATTATTACA ATCAGTTGCT 1855 .......... .......... .......... .......... .......... .......... 341 TCATTTGATT TGTATCTTGC TATTTTGTCG TTTTATTTAC TTGCACCATG CTTTTTCTTT 1795 .......... .......... .......... .......... .......... .......... 341 TCTTTTCTTT TGAGTTCAGG GTCCTTCGTG AACAACCTGC AAAGGTAGGG GTATGTTCAG 1735 .......... .......... .......... .......... .......... .......... 341 CGTACATCGA TATCCTACCT TCCCAATATC CAACTTGTGA AATTACACTG AATATATAGT 1675 .......... .......... .......... .......... .......... .......... 341 TATTTTTGTG GTTGTTGTAG TATACATCTA CTTTCTAGTG GTGTTATACA AACCATGGTT 1615 .......... .......... .......... .......... .......... .......... 341 TAAACGGTTG AGATTATTAG TTCATGGAGT CGAATAAGCA TTTGCCTAAA ACAGTTGAGA 1555 .......... .......... .......... .......... .......... .......... 341 TTATTAGTTC ATGGAGTCGA ATAAGCATTT CCCTAAAACA GTTGAGATTA TTAGTTCATG 1495 .......... .......... .......... .......... .......... .......... 341 GAGTCGAATA AGCATTTGCC TAAAACAGTT GAGATTATTA GTTCATGGAG TCGAATAAGC 1435 .......... .......... .......... .......... .......... .......... 341 ATTTGCCTAA AACAGTTGAG ATTATTAGTT CATGGAGTCG AATAAGCATT TGCCTAAAAC 1375 .......... .......... .......... .......... .......... .......... 341 AGTTGAGATT ATTAGTTCAT GGAGTCGAAT AAGCATTTGC CTAAAACAGT TGAGATTATT 1315 .......... .......... .......... .......... .......... .......... 341 AGTTCATGGA GTCGAATAAG CATTTGCCTA AAACAGTTGA GATTATTAGT TCATGGAGTC 1255 .......... .......... .......... .......... .......... .......... 341 GAATAAGCAT TTGCCTAAAA CAGTTGAGAT TATTAGTTCA TGGAGTCGAA TAAGCATTTG 1195 .......... .......... .......... .......... .......... .......... 341 CCTAAAACAG TTGAGATTAT TAGTTCATGG AGTCGAATAA GCATTTACCT ATCAGAGACG 1135 .......... .......... .......... .......... .......... .......... 341 AATCTAAGAT TTATACAATT TCTGTATATA CAATTTCTGT ATATATATAT ATATATATAT 1075 .......... .......... .......... .......... .......... .......... 341 ATGCAAACAT AATCTGAGTT TGCTAGTATT GGTTTTGAGA TATGTTCAAT AATATGTTAC 1015 .......... .......... .......... .......... .......... .......... 341 TTGCAGGATA CCAATTGAAC CAGTTTTTTC AGAAGGGAGC ATCCCAATAA CATGTTATAA 955 |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ......GATA CCAATTGAAC CAGTTTTTTC AGAAGGGAGC ATCCCAATAA CATGTTATAA 395 TGTTGTTAAA GATGAGGAAT ATTGTGGAGA AATTAAAGTT GGTCTCACCT TTACTCCTGA 895 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTGTTAAA GATGAGGAAT ATTGTGGAGA AATTAAAGTT GGTCTCACCT TTACTCCTGA 455 GGCAAGTTAC TTTCTAAAAT TTTATTGATT TATAAAAAAA AAAAAAAAAA AGGTTATGCC 835 | G......... .......... .......... .......... .......... .......... 456 TCAATCCCGA GCTAACAAGT TCAGATTGGC TATATGAATA AAGGAACTCG TAACATGCAA 775 .......... .......... .......... .......... .......... .......... 456 GTATAATAGG TATTCTATGT GCATGATATA TTTTGCTATG TTTTTGTAGG AATATTCTGA 715 | |||||||||| .......... .......... .......... .......... .........G AATATTCTGA 467 GAGGGAGTAT GAAGAAGAGA ACCTTGGTGG ATGG-AAAGA GTCTTCTTAT TGATGTGAAG 656 |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| GAGGGAGTAT GAAGAAGAGA ACCTTGGTGG ATGGAAAAGA GTCTTCTTAT TGATGTGAAG 527 CATTACTCGA CTGAT 641 |||||||||| ||||| CATTACTCGA CTGAT 542 hqPGS_C08HBa0235H18.1-_SGN-E336643+ (3114 2967,2474 2409,2290 2164,1008 894,725 641) ******************************************************************************** EST sequence 1009 +strand 437 n (File: SGN-E281980+) 1 AAAACTTGTA GTTCAACTTG TTGGAGCTAA AGGCCTTGAA AACACTGATT TTCTCAATGA 61 TATGGATCCA TATGTGATCT TAACTTATAG ATCTCAGGAG AAAAAGAGTA CTGTTGCATC 121 AGGGAAGGGA TGTGAACCAG AATGGAATGA AACATTTGTT TTCTCCATTT CTGAGGATGC 181 TGAAGAACTC TTCTTGAAGA TAATGGACAG TGATTCTATC GGCGAGGACG ATATTGTTGG 241 GGAAGCTAAG ATACCAATTG AACCAGTTTT TTCAGAAGGG AGCATCCCAA TAACATGTTA 301 TAATGTTGTT AAAGATGAGG AATATTGTGG AGAAATTAAA GTTGGTCTCA CCTTTACTCC 361 TGAGGAATAT TCTGAGAGGG AGTATGAAGA AGAGAACCTT GGTGGATGGA AAGAGTCTTC 421 TTATTGATGT GAAGCAT Predicted gene structure (within gDNA segment 3622 to 43): Exon 1 3022 2967 ( 56 n); cDNA 1 56 ( 56 n); score: 1.000 Intron 1 2966 2475 ( 492 n); Pd: 0.999 (s: 1.00), Pa: 0.999 (s: 1.00) Exon 2 2474 2409 ( 66 n); cDNA 57 122 ( 66 n); score: 1.000 Intron 2 2408 2291 ( 118 n); Pd: 0.991 (s: 1.00), Pa: 0.989 (s: 1.00) Exon 3 2290 2164 ( 127 n); cDNA 123 249 ( 127 n); score: 1.000 Intron 3 2163 1009 (1155 n); Pd: 0.998 (s: 1.00), Pa: 0.997 (s: 1.00) Exon 4 1008 894 ( 115 n); cDNA 250 364 ( 115 n); score: 1.000 Intron 4 893 726 ( 168 n); Pd: 0.999 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 5 725 653 ( 73 n); cDNA 365 437 ( 73 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E281980+ 1.000 437 1.000 C PGS_C08HBa0235H18.1-_SGN-E281980+ (3022 2967,2474 2409,2290 2164,1008 894,725 653) Alignment (genomic DNA sequence = upper lines): AAAACTTGTA GTTCAACTTG TTGGAGCTAA AGGCCTTGAA AACACTGATT TTCTCAGTAA 2963 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| AAAACTTGTA GTTCAACTTG TTGGAGCTAA AGGCCTTGAA AACACTGATT TTCTCA.... 56 GTTTTTTGTT TTTTTTTCTA ATTTATTTGT TTTGATCTGA TCAGATTAAT GTATAGATCT 2903 .......... .......... .......... .......... .......... .......... 56 CTTTTTTCTT TCGATTACAT TTGATGTTTT CTTAATCAAC CTAATTTTCG ATTGTTACTT 2843 .......... .......... .......... .......... .......... .......... 56 ATGTGAATTA GAGGTTGATC TACATGTAAT TTATGTGTTC ACACAACACC TGTTTGAATG 2783 .......... .......... .......... .......... .......... .......... 56 TGCGTTTTAT TTAGGAAAAT AGAGAATTAT TTGAAGATCG GATCAAATTT TCATGATCAA 2723 .......... .......... .......... .......... .......... .......... 56 ACAGATATTT GTCAAAATTC ATGGCCAAAC CTTATCAATG TATATTAATT TGACTTCGTG 2663 .......... .......... .......... .......... .......... .......... 56 GTAAACTTTA AATTTTGAAT CAAAGTATGT GAAGTTGACA TTTAGGTCTA TGCCTAGTCA 2603 .......... .......... .......... .......... .......... .......... 56 AACGATGTCA AATAAAATAG AATCGAGGAA TATGAATCAA AAATCGATAA TCATCTTGGC 2543 .......... .......... .......... .......... .......... .......... 56 TAATTTGATT GATACTCTGT ATTTTATTTT ATTTTTTAAT TTAAAAAATG TTATTTTGTG 2483 .......... .......... .......... .......... .......... .......... 56 TGATACAGAT GATATGGATC CATATGTGAT CTTAACTTAT AGATCTCAGG AGAAAAAGAG 2423 || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ........AT GATATGGATC CATATGTGAT CTTAACTTAT AGATCTCAGG AGAAAAAGAG 108 TACTGTTGCA TCAGGTACAT TTGTTAATAA TCTTTGGTTA ATTATTACTT AGTTATTAGT 2363 |||||||||| |||| TACTGTTGCA TCAG...... .......... .......... .......... .......... 122 TACCTATGTT TTTTTTAAGA AAAATGAAAT GAAGTTTGAT CAATCGATAT TTATAATGTT 2303 .......... .......... .......... .......... .......... .......... 122 AAATTTTCAT AGGGAAGGGA TGTGAACCAG AATGGAATGA AACATTTGTT TTCTCCATTT 2243 |||||||| |||||||||| |||||||||| |||||||||| |||||||||| .......... ..GGAAGGGA TGTGAACCAG AATGGAATGA AACATTTGTT TTCTCCATTT 170 CTGAGGATGC TGAAGAACTC TTCTTGAAGA TAATGGACAG TGATTCTATC GGCGAGGACG 2183 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGAGGATGC TGAAGAACTC TTCTTGAAGA TAATGGACAG TGATTCTATC GGCGAGGACG 230 ATATTGTTGG GGAAGCTAAG TAAGTATATC TAATTAGAGG CGAATCTAAG ATTATACGTA 2123 |||||||||| ||||||||| ATATTGTTGG GGAAGCTAA. .......... .......... .......... .......... 249 TTTTCTCTAT ATTAACATAG TTTGAGTTTG ATAGTACATG CATCCATGAC TTGTATATGT 2063 .......... .......... .......... .......... .......... .......... 249 TGAGATAAAT AGACGTATAT GACTTTAGAT AAGAAGACGT GGAGGTCGAA AATTAGGGTA 2003 .......... .......... .......... .......... .......... .......... 249 GAAGGTTAGT AGTTAGTGAG CCTGAGTGTT GTTGCACTTG TTATTGGAGA GGAAGAGGGC 1943 .......... .......... .......... .......... .......... .......... 249 TAGCCTAGTC TCTACTTCTC CTTTTTAGTA GTAGTATTTT GTATATCGCG TAGTTTCCTT 1883 .......... .......... .......... .......... .......... .......... 249 TCTTTAATGA TTATTACAAT CAGTTGCTTC ATTTGATTTG TATCTTGCTA TTTTGTCGTT 1823 .......... .......... .......... .......... .......... .......... 249 TTATTTACTT GCACCATGCT TTTTCTTTTC TTTTCTTTTG AGTTCAGGGT CCTTCGTGAA 1763 .......... .......... .......... .......... .......... .......... 249 CAACCTGCAA AGGTAGGGGT ATGTTCAGCG TACATCGATA TCCTACCTTC CCAATATCCA 1703 .......... .......... .......... .......... .......... .......... 249 ACTTGTGAAA TTACACTGAA TATATAGTTA TTTTTGTGGT TGTTGTAGTA TACATCTACT 1643 .......... .......... .......... .......... .......... .......... 249 TTCTAGTGGT GTTATACAAA CCATGGTTTA AACGGTTGAG ATTATTAGTT CATGGAGTCG 1583 .......... .......... .......... .......... .......... .......... 249 AATAAGCATT TGCCTAAAAC AGTTGAGATT ATTAGTTCAT GGAGTCGAAT AAGCATTTCC 1523 .......... .......... .......... .......... .......... .......... 249 CTAAAACAGT TGAGATTATT AGTTCATGGA GTCGAATAAG CATTTGCCTA AAACAGTTGA 1463 .......... .......... .......... .......... .......... .......... 249 GATTATTAGT TCATGGAGTC GAATAAGCAT TTGCCTAAAA CAGTTGAGAT TATTAGTTCA 1403 .......... .......... .......... .......... .......... .......... 249 TGGAGTCGAA TAAGCATTTG CCTAAAACAG TTGAGATTAT TAGTTCATGG AGTCGAATAA 1343 .......... .......... .......... .......... .......... .......... 249 GCATTTGCCT AAAACAGTTG AGATTATTAG TTCATGGAGT CGAATAAGCA TTTGCCTAAA 1283 .......... .......... .......... .......... .......... .......... 249 ACAGTTGAGA TTATTAGTTC ATGGAGTCGA ATAAGCATTT GCCTAAAACA GTTGAGATTA 1223 .......... .......... .......... .......... .......... .......... 249 TTAGTTCATG GAGTCGAATA AGCATTTGCC TAAAACAGTT GAGATTATTA GTTCATGGAG 1163 .......... .......... .......... .......... .......... .......... 249 TCGAATAAGC ATTTACCTAT CAGAGACGAA TCTAAGATTT ATACAATTTC TGTATATACA 1103 .......... .......... .......... .......... .......... .......... 249 ATTTCTGTAT ATATATATAT ATATATATAT GCAAACATAA TCTGAGTTTG CTAGTATTGG 1043 .......... .......... .......... .......... .......... .......... 249 TTTTGAGATA TGTTCAATAA TATGTTACTT GCAGGATACC AATTGAACCA GTTTTTTCAG 983 |||||| |||||||||| |||||||||| .......... .......... .......... ....GATACC AATTGAACCA GTTTTTTCAG 275 AAGGGAGCAT CCCAATAACA TGTTATAATG TTGTTAAAGA TGAGGAATAT TGTGGAGAAA 923 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGGAGCAT CCCAATAACA TGTTATAATG TTGTTAAAGA TGAGGAATAT TGTGGAGAAA 335 TTAAAGTTGG TCTCACCTTT ACTCCTGAGG CAAGTTACTT TCTAAAATTT TATTGATTTA 863 |||||||||| |||||||||| ||||||||| TTAAAGTTGG TCTCACCTTT ACTCCTGAG. .......... .......... .......... 364 TAAAAAAAAA AAAAAAAAAG GTTATGCCTC AATCCCGAGC TAACAAGTTC AGATTGGCTA 803 .......... .......... .......... .......... .......... .......... 364 TATGAATAAA GGAACTCGTA ACATGCAAGT ATAATAGGTA TTCTATGTGC ATGATATATT 743 .......... .......... .......... .......... .......... .......... 364 TTGCTATGTT TTTGTAGGAA TATTCTGAGA GGGAGTATGA AGAAGAGAAC CTTGGTGGAT 683 ||| |||||||||| |||||||||| |||||||||| |||||||||| .......... .......GAA TATTCTGAGA GGGAGTATGA AGAAGAGAAC CTTGGTGGAT 407 GGAAAGAGTC TTCTTATTGA TGTGAAGCAT 653 |||||||||| |||||||||| |||||||||| GGAAAGAGTC TTCTTATTGA TGTGAAGCAT 437 hqPGS_C08HBa0235H18.1-_SGN-E281980+ (3022 2967,2474 2409,2290 2164,1008 894,725 653) ******************************************************************************** EST sequence 752 +strand 462 n (File: SGN-E291193+) 1 AAAAGAAAAC GATCTCTGTC CGAAAATTCG TGCGAGAATC TGTAGTTTTT TCCTGGGAAT 61 CTGCTAAGAG TTTGATTGAA AATGGTACGA GGAAAACTTG TAGTTCAACT TGTTGGAGCT 121 AAAGGCCTTG AAAACACTGA TTTTATCAAT GATATGGATC CATATGTGAT CTTAACTTAT 181 AGATCTCAGG AGAAAAAGAG TACTGATGCA TCACGGAAGG GATGTGAACC AGAATGGAAT 241 GAAACATTTG TTTTCTCCAT TTCTGAGGAT GCTGAAGAAC TCTTCTTGAA GATAATGGAC 301 AGTGATTCTA TCGGCGAGGA CGATATTGTT GGGGAAGCTA AGATACCAAT TGAACCAGTT 361 TTTTCAGAAG GGAGCATCCC AATAACATGT TATAATGTTG TTAAAGATGA CGAATATTGT 421 GGAGAAATTA AAGCTGGTCT CACCTTTACT CCTGAGGAAT AT Predicted gene structure (within gDNA segment 3714 to 233): Exon 1 3114 2967 ( 148 n); cDNA 1 148 ( 148 n); score: 0.980 Intron 1 2966 2475 ( 492 n); Pd: 0.999 (s: 0.98), Pa: 0.999 (s: 1.00) Exon 2 2474 2409 ( 66 n); cDNA 149 214 ( 66 n); score: 0.970 Intron 2 2408 2291 ( 118 n); Pd: 0.991 (s: 0.96), Pa: 0.989 (s: 1.00) Exon 3 2290 2164 ( 127 n); cDNA 215 341 ( 127 n); score: 1.000 Intron 3 2163 1009 (1155 n); Pd: 0.998 (s: 1.00), Pa: 0.997 (s: 1.00) Exon 4 1008 894 ( 115 n); cDNA 342 456 ( 115 n); score: 0.983 Intron 4 893 726 ( 168 n); Pd: 0.999 (s: 0.96), Pa: 1.000 (s: 0) Exon 5 725 720 ( 6 n); cDNA 457 462 ( 6 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E291193+ 0.985 462 1.000 C PGS_C08HBa0235H18.1-_SGN-E291193+ (3114 2967,2474 2409,2290 2164,1008 894,725 720) Alignment (genomic DNA sequence = upper lines): AAAAGAAAAC GATCTCTGTC CGAAAATTCG TGCGAGAATC TGTTTTTTTT TCCTGGGAAT 3055 |||||||||| |||||||||| |||||||||| |||||||||| ||| ||||| |||||||||| AAAAGAAAAC GATCTCTGTC CGAAAATTCG TGCGAGAATC TGTAGTTTTT TCCTGGGAAT 60 CTGCTAAGAG TTTGATTGAA AATGGTACGA GGAAAACTTG TAGTTCAACT TGTTGGAGCT 2995 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGCTAAGAG TTTGATTGAA AATGGTACGA GGAAAACTTG TAGTTCAACT TGTTGGAGCT 120 AAAGGCCTTG AAAACACTGA TTTTCTCAGT AAGTTTTTTG TTTTTTTTTC TAATTTATTT 2935 |||||||||| |||||||||| |||| ||| AAAGGCCTTG AAAACACTGA TTTTATCA.. .......... .......... .......... 148 GTTTTGATCT GATCAGATTA ATGTATAGAT CTCTTTTTTC TTTCGATTAC ATTTGATGTT 2875 .......... .......... .......... .......... .......... .......... 148 TTCTTAATCA ACCTAATTTT CGATTGTTAC TTATGTGAAT TAGAGGTTGA TCTACATGTA 2815 .......... .......... .......... .......... .......... .......... 148 ATTTATGTGT TCACACAACA CCTGTTTGAA TGTGCGTTTT ATTTAGGAAA ATAGAGAATT 2755 .......... .......... .......... .......... .......... .......... 148 ATTTGAAGAT CGGATCAAAT TTTCATGATC AAACAGATAT TTGTCAAAAT TCATGGCCAA 2695 .......... .......... .......... .......... .......... .......... 148 ACCTTATCAA TGTATATTAA TTTGACTTCG TGGTAAACTT TAAATTTTGA ATCAAAGTAT 2635 .......... .......... .......... .......... .......... .......... 148 GTGAAGTTGA CATTTAGGTC TATGCCTAGT CAAACGATGT CAAATAAAAT AGAATCGAGG 2575 .......... .......... .......... .......... .......... .......... 148 AATATGAATC AAAAATCGAT AATCATCTTG GCTAATTTGA TTGATACTCT GTATTTTATT 2515 .......... .......... .......... .......... .......... .......... 148 TTATTTTTTA ATTTAAAAAA TGTTATTTTG TGTGATACAG ATGATATGGA TCCATATGTG 2455 |||||||||| |||||||||| .......... .......... .......... .......... ATGATATGGA TCCATATGTG 168 ATCTTAACTT ATAGATCTCA GGAGAAAAAG AGTACTGTTG CATCAGGTAC ATTTGTTAAT 2395 |||||||||| |||||||||| |||||||||| ||||||| || ||||| ATCTTAACTT ATAGATCTCA GGAGAAAAAG AGTACTGATG CATCAC.... .......... 214 AATCTTTGGT TAATTATTAC TTAGTTATTA GTTACCTATG TTTTTTTTAA GAAAAATGAA 2335 .......... .......... .......... .......... .......... .......... 214 ATGAAGTTTG ATCAATCGAT ATTTATAATG TTAAATTTTC ATAGGGAAGG GATGTGAACC 2275 |||||| |||||||||| .......... .......... .......... .......... ....GGAAGG GATGTGAACC 230 AGAATGGAAT GAAACATTTG TTTTCTCCAT TTCTGAGGAT GCTGAAGAAC TCTTCTTGAA 2215 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAATGGAAT GAAACATTTG TTTTCTCCAT TTCTGAGGAT GCTGAAGAAC TCTTCTTGAA 290 GATAATGGAC AGTGATTCTA TCGGCGAGGA CGATATTGTT GGGGAAGCTA AGTAAGTATA 2155 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | GATAATGGAC AGTGATTCTA TCGGCGAGGA CGATATTGTT GGGGAAGCTA A......... 341 TCTAATTAGA GGCGAATCTA AGATTATACG TATTTTCTCT ATATTAACAT AGTTTGAGTT 2095 .......... .......... .......... .......... .......... .......... 341 TGATAGTACA TGCATCCATG ACTTGTATAT GTTGAGATAA ATAGACGTAT ATGACTTTAG 2035 .......... .......... .......... .......... .......... .......... 341 ATAAGAAGAC GTGGAGGTCG AAAATTAGGG TAGAAGGTTA GTAGTTAGTG AGCCTGAGTG 1975 .......... .......... .......... .......... .......... .......... 341 TTGTTGCACT TGTTATTGGA GAGGAAGAGG GCTAGCCTAG TCTCTACTTC TCCTTTTTAG 1915 .......... .......... .......... .......... .......... .......... 341 TAGTAGTATT TTGTATATCG CGTAGTTTCC TTTCTTTAAT GATTATTACA ATCAGTTGCT 1855 .......... .......... .......... .......... .......... .......... 341 TCATTTGATT TGTATCTTGC TATTTTGTCG TTTTATTTAC TTGCACCATG CTTTTTCTTT 1795 .......... .......... .......... .......... .......... .......... 341 TCTTTTCTTT TGAGTTCAGG GTCCTTCGTG AACAACCTGC AAAGGTAGGG GTATGTTCAG 1735 .......... .......... .......... .......... .......... .......... 341 CGTACATCGA TATCCTACCT TCCCAATATC CAACTTGTGA AATTACACTG AATATATAGT 1675 .......... .......... .......... .......... .......... .......... 341 TATTTTTGTG GTTGTTGTAG TATACATCTA CTTTCTAGTG GTGTTATACA AACCATGGTT 1615 .......... .......... .......... .......... .......... .......... 341 TAAACGGTTG AGATTATTAG TTCATGGAGT CGAATAAGCA TTTGCCTAAA ACAGTTGAGA 1555 .......... .......... .......... .......... .......... .......... 341 TTATTAGTTC ATGGAGTCGA ATAAGCATTT CCCTAAAACA GTTGAGATTA TTAGTTCATG 1495 .......... .......... .......... .......... .......... .......... 341 GAGTCGAATA AGCATTTGCC TAAAACAGTT GAGATTATTA GTTCATGGAG TCGAATAAGC 1435 .......... .......... .......... .......... .......... .......... 341 ATTTGCCTAA AACAGTTGAG ATTATTAGTT CATGGAGTCG AATAAGCATT TGCCTAAAAC 1375 .......... .......... .......... .......... .......... .......... 341 AGTTGAGATT ATTAGTTCAT GGAGTCGAAT AAGCATTTGC CTAAAACAGT TGAGATTATT 1315 .......... .......... .......... .......... .......... .......... 341 AGTTCATGGA GTCGAATAAG CATTTGCCTA AAACAGTTGA GATTATTAGT TCATGGAGTC 1255 .......... .......... .......... .......... .......... .......... 341 GAATAAGCAT TTGCCTAAAA CAGTTGAGAT TATTAGTTCA TGGAGTCGAA TAAGCATTTG 1195 .......... .......... .......... .......... .......... .......... 341 CCTAAAACAG TTGAGATTAT TAGTTCATGG AGTCGAATAA GCATTTACCT ATCAGAGACG 1135 .......... .......... .......... .......... .......... .......... 341 AATCTAAGAT TTATACAATT TCTGTATATA CAATTTCTGT ATATATATAT ATATATATAT 1075 .......... .......... .......... .......... .......... .......... 341 ATGCAAACAT AATCTGAGTT TGCTAGTATT GGTTTTGAGA TATGTTCAAT AATATGTTAC 1015 .......... .......... .......... .......... .......... .......... 341 TTGCAGGATA CCAATTGAAC CAGTTTTTTC AGAAGGGAGC ATCCCAATAA CATGTTATAA 955 |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ......GATA CCAATTGAAC CAGTTTTTTC AGAAGGGAGC ATCCCAATAA CATGTTATAA 395 TGTTGTTAAA GATGAGGAAT ATTGTGGAGA AATTAAAGTT GGTCTCACCT TTACTCCTGA 895 |||||||||| ||||| |||| |||||||||| |||||||| | |||||||||| |||||||||| TGTTGTTAAA GATGACGAAT ATTGTGGAGA AATTAAAGCT GGTCTCACCT TTACTCCTGA 455 GGCAAGTTAC TTTCTAAAAT TTTATTGATT TATAAAAAAA AAAAAAAAAA AGGTTATGCC 835 | G......... .......... .......... .......... .......... .......... 456 TCAATCCCGA GCTAACAAGT TCAGATTGGC TATATGAATA AAGGAACTCG TAACATGCAA 775 .......... .......... .......... .......... .......... .......... 456 GTATAATAGG TATTCTATGT GCATGATATA TTTTGCTATG TTTTTGTAGG AATAT 720 | ||||| .......... .......... .......... .......... .........G AATAT 462 hqPGS_C08HBa0235H18.1-_SGN-E291193+ (3114 2967,2474 2409,2290 2164,1008 894,725 720) ******************************************************************************** EST sequence 1194 +strand 450 n (File: SGN-E292732+) 1 AAAAGAAAAC GATCTCTGTC CGAAAATTCG TGCGAGAATC TGTTTTTTTT TCCTGGGAAT 61 CTGCTAAGAG TTTGATTGAA AATGGTACGA GGAAAACTTG TAGTTCAACT TGTTGGAGCT 121 AAAGGCCTTG AAAACACTGA TTTTCTCAAT GATATGGATC CATATGTGAT CTTAACTTAT 181 AGATCTCAGG AGAAAAAGAG TACTGTTGCA TCAGGGAAGG GATGTGAACC AGAATGGAAT 241 GAAACATTTG TTTTCTCCAT TTCTGAGGAT GCTGAAGAAC TCTTCTTGAA GATAATGGAC 301 AGTGATTCTA TCGGCGAGGA CGATATTGTT GGGGAAGCTA AGATACCAAT TGAACCAGTT 361 TTTTCAGAAG GGAGCATCCC AATAACATGT TATAATGTTG TTAAAGATGA GGAATATTGT 421 GGAGAAATTA AAGTTGGTCT CACCTTTACT Predicted gene structure (within gDNA segment 3714 to 290): Exon 1 3114 2967 ( 148 n); cDNA 1 148 ( 148 n); score: 1.000 Intron 1 2966 2475 ( 492 n); Pd: 0.999 (s: 1.00), Pa: 0.999 (s: 1.00) Exon 2 2474 2409 ( 66 n); cDNA 149 214 ( 66 n); score: 1.000 Intron 2 2408 2291 ( 118 n); Pd: 0.991 (s: 1.00), Pa: 0.989 (s: 1.00) Exon 3 2290 2164 ( 127 n); cDNA 215 341 ( 127 n); score: 1.000 Intron 3 2163 1009 (1155 n); Pd: 0.998 (s: 1.00), Pa: 0.997 (s: 1.00) Exon 4 1008 900 ( 109 n); cDNA 342 450 ( 109 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E292732+ 1.000 450 1.000 C PGS_C08HBa0235H18.1-_SGN-E292732+ (3114 2967,2474 2409,2290 2164,1008 900) Alignment (genomic DNA sequence = upper lines): AAAAGAAAAC GATCTCTGTC CGAAAATTCG TGCGAGAATC TGTTTTTTTT TCCTGGGAAT 3055 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAGAAAAC GATCTCTGTC CGAAAATTCG TGCGAGAATC TGTTTTTTTT TCCTGGGAAT 60 CTGCTAAGAG TTTGATTGAA AATGGTACGA GGAAAACTTG TAGTTCAACT TGTTGGAGCT 2995 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGCTAAGAG TTTGATTGAA AATGGTACGA GGAAAACTTG TAGTTCAACT TGTTGGAGCT 120 AAAGGCCTTG AAAACACTGA TTTTCTCAGT AAGTTTTTTG TTTTTTTTTC TAATTTATTT 2935 |||||||||| |||||||||| |||||||| AAAGGCCTTG AAAACACTGA TTTTCTCA.. .......... .......... .......... 148 GTTTTGATCT GATCAGATTA ATGTATAGAT CTCTTTTTTC TTTCGATTAC ATTTGATGTT 2875 .......... .......... .......... .......... .......... .......... 148 TTCTTAATCA ACCTAATTTT CGATTGTTAC TTATGTGAAT TAGAGGTTGA TCTACATGTA 2815 .......... .......... .......... .......... .......... .......... 148 ATTTATGTGT TCACACAACA CCTGTTTGAA TGTGCGTTTT ATTTAGGAAA ATAGAGAATT 2755 .......... .......... .......... .......... .......... .......... 148 ATTTGAAGAT CGGATCAAAT TTTCATGATC AAACAGATAT TTGTCAAAAT TCATGGCCAA 2695 .......... .......... .......... .......... .......... .......... 148 ACCTTATCAA TGTATATTAA TTTGACTTCG TGGTAAACTT TAAATTTTGA ATCAAAGTAT 2635 .......... .......... .......... .......... .......... .......... 148 GTGAAGTTGA CATTTAGGTC TATGCCTAGT CAAACGATGT CAAATAAAAT AGAATCGAGG 2575 .......... .......... .......... .......... .......... .......... 148 AATATGAATC AAAAATCGAT AATCATCTTG GCTAATTTGA TTGATACTCT GTATTTTATT 2515 .......... .......... .......... .......... .......... .......... 148 TTATTTTTTA ATTTAAAAAA TGTTATTTTG TGTGATACAG ATGATATGGA TCCATATGTG 2455 |||||||||| |||||||||| .......... .......... .......... .......... ATGATATGGA TCCATATGTG 168 ATCTTAACTT ATAGATCTCA GGAGAAAAAG AGTACTGTTG CATCAGGTAC ATTTGTTAAT 2395 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ATCTTAACTT ATAGATCTCA GGAGAAAAAG AGTACTGTTG CATCAG.... .......... 214 AATCTTTGGT TAATTATTAC TTAGTTATTA GTTACCTATG TTTTTTTTAA GAAAAATGAA 2335 .......... .......... .......... .......... .......... .......... 214 ATGAAGTTTG ATCAATCGAT ATTTATAATG TTAAATTTTC ATAGGGAAGG GATGTGAACC 2275 |||||| |||||||||| .......... .......... .......... .......... ....GGAAGG GATGTGAACC 230 AGAATGGAAT GAAACATTTG TTTTCTCCAT TTCTGAGGAT GCTGAAGAAC TCTTCTTGAA 2215 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAATGGAAT GAAACATTTG TTTTCTCCAT TTCTGAGGAT GCTGAAGAAC TCTTCTTGAA 290 GATAATGGAC AGTGATTCTA TCGGCGAGGA CGATATTGTT GGGGAAGCTA AGTAAGTATA 2155 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | GATAATGGAC AGTGATTCTA TCGGCGAGGA CGATATTGTT GGGGAAGCTA A......... 341 TCTAATTAGA GGCGAATCTA AGATTATACG TATTTTCTCT ATATTAACAT AGTTTGAGTT 2095 .......... .......... .......... .......... .......... .......... 341 TGATAGTACA TGCATCCATG ACTTGTATAT GTTGAGATAA ATAGACGTAT ATGACTTTAG 2035 .......... .......... .......... .......... .......... .......... 341 ATAAGAAGAC GTGGAGGTCG AAAATTAGGG TAGAAGGTTA GTAGTTAGTG AGCCTGAGTG 1975 .......... .......... .......... .......... .......... .......... 341 TTGTTGCACT TGTTATTGGA GAGGAAGAGG GCTAGCCTAG TCTCTACTTC TCCTTTTTAG 1915 .......... .......... .......... .......... .......... .......... 341 TAGTAGTATT TTGTATATCG CGTAGTTTCC TTTCTTTAAT GATTATTACA ATCAGTTGCT 1855 .......... .......... .......... .......... .......... .......... 341 TCATTTGATT TGTATCTTGC TATTTTGTCG TTTTATTTAC TTGCACCATG CTTTTTCTTT 1795 .......... .......... .......... .......... .......... .......... 341 TCTTTTCTTT TGAGTTCAGG GTCCTTCGTG AACAACCTGC AAAGGTAGGG GTATGTTCAG 1735 .......... .......... .......... .......... .......... .......... 341 CGTACATCGA TATCCTACCT TCCCAATATC CAACTTGTGA AATTACACTG AATATATAGT 1675 .......... .......... .......... .......... .......... .......... 341 TATTTTTGTG GTTGTTGTAG TATACATCTA CTTTCTAGTG GTGTTATACA AACCATGGTT 1615 .......... .......... .......... .......... .......... .......... 341 TAAACGGTTG AGATTATTAG TTCATGGAGT CGAATAAGCA TTTGCCTAAA ACAGTTGAGA 1555 .......... .......... .......... .......... .......... .......... 341 TTATTAGTTC ATGGAGTCGA ATAAGCATTT CCCTAAAACA GTTGAGATTA TTAGTTCATG 1495 .......... .......... .......... .......... .......... .......... 341 GAGTCGAATA AGCATTTGCC TAAAACAGTT GAGATTATTA GTTCATGGAG TCGAATAAGC 1435 .......... .......... .......... .......... .......... .......... 341 ATTTGCCTAA AACAGTTGAG ATTATTAGTT CATGGAGTCG AATAAGCATT TGCCTAAAAC 1375 .......... .......... .......... .......... .......... .......... 341 AGTTGAGATT ATTAGTTCAT GGAGTCGAAT AAGCATTTGC CTAAAACAGT TGAGATTATT 1315 .......... .......... .......... .......... .......... .......... 341 AGTTCATGGA GTCGAATAAG CATTTGCCTA AAACAGTTGA GATTATTAGT TCATGGAGTC 1255 .......... .......... .......... .......... .......... .......... 341 GAATAAGCAT TTGCCTAAAA CAGTTGAGAT TATTAGTTCA TGGAGTCGAA TAAGCATTTG 1195 .......... .......... .......... .......... .......... .......... 341 CCTAAAACAG TTGAGATTAT TAGTTCATGG AGTCGAATAA GCATTTACCT ATCAGAGACG 1135 .......... .......... .......... .......... .......... .......... 341 AATCTAAGAT TTATACAATT TCTGTATATA CAATTTCTGT ATATATATAT ATATATATAT 1075 .......... .......... .......... .......... .......... .......... 341 ATGCAAACAT AATCTGAGTT TGCTAGTATT GGTTTTGAGA TATGTTCAAT AATATGTTAC 1015 .......... .......... .......... .......... .......... .......... 341 TTGCAGGATA CCAATTGAAC CAGTTTTTTC AGAAGGGAGC ATCCCAATAA CATGTTATAA 955 |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ......GATA CCAATTGAAC CAGTTTTTTC AGAAGGGAGC ATCCCAATAA CATGTTATAA 395 TGTTGTTAAA GATGAGGAAT ATTGTGGAGA AATTAAAGTT GGTCTCACCT TTACT 900 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| TGTTGTTAAA GATGAGGAAT ATTGTGGAGA AATTAAAGTT GGTCTCACCT TTACT 450 hqPGS_C08HBa0235H18.1-_SGN-E292732+ (3114 2967,2474 2409,2290 2164,1008 900) ******************************************************************************** EST sequence 1072 +strand 390 n (File: SGN-E289946+) 1 AAAAGAAAAC GATCTCTGTC CGAAAATTCG TGCGAGAATC TGTTTTTTTT TCCTGGGAAT 61 CTGCTAAGAG TTTGATTGAA AATGGTACGA GGAAAACTTG TAGTTCAACT TGTTGGAGCT 121 AAAGGCCTTG AAAACACTGA TTTTCTCAAT GATATGGATC CATATGTGAT CTTAACTTAT 181 AGATCTCAGG AGAAAAAGAG TACTGTTGCA TCAGGGAAGG GATGTGAACC AGAATGGAAT 241 GAAACATTTG TTTTCTCCAT TTCTGAGGAT GCTGAAGAAC TCTTCTTGAA GATAATGGAC 301 AGTGATTCTA TCGGCGAGGA CGATATTGTT GGGGAAGCTA AGATACCAAT TGAACCAGTT 361 TTTTCAGAAG GGAGCATCCC AATAACATGT Predicted gene structure (within gDNA segment 3714 to 350): Exon 1 3114 2967 ( 148 n); cDNA 1 148 ( 148 n); score: 1.000 Intron 1 2966 2475 ( 492 n); Pd: 0.999 (s: 1.00), Pa: 0.999 (s: 1.00) Exon 2 2474 2409 ( 66 n); cDNA 149 214 ( 66 n); score: 1.000 Intron 2 2408 2291 ( 118 n); Pd: 0.991 (s: 1.00), Pa: 0.989 (s: 1.00) Exon 3 2290 2164 ( 127 n); cDNA 215 341 ( 127 n); score: 1.000 Intron 3 2163 1009 (1155 n); Pd: 0.998 (s: 1.00), Pa: 0.997 (s: 1.00) Exon 4 1008 960 ( 49 n); cDNA 342 390 ( 49 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E289946+ 1.000 390 1.000 C PGS_C08HBa0235H18.1-_SGN-E289946+ (3114 2967,2474 2409,2290 2164,1008 960) Alignment (genomic DNA sequence = upper lines): AAAAGAAAAC GATCTCTGTC CGAAAATTCG TGCGAGAATC TGTTTTTTTT TCCTGGGAAT 3055 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAGAAAAC GATCTCTGTC CGAAAATTCG TGCGAGAATC TGTTTTTTTT TCCTGGGAAT 60 CTGCTAAGAG TTTGATTGAA AATGGTACGA GGAAAACTTG TAGTTCAACT TGTTGGAGCT 2995 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGCTAAGAG TTTGATTGAA AATGGTACGA GGAAAACTTG TAGTTCAACT TGTTGGAGCT 120 AAAGGCCTTG AAAACACTGA TTTTCTCAGT AAGTTTTTTG TTTTTTTTTC TAATTTATTT 2935 |||||||||| |||||||||| |||||||| AAAGGCCTTG AAAACACTGA TTTTCTCA.. .......... .......... .......... 148 GTTTTGATCT GATCAGATTA ATGTATAGAT CTCTTTTTTC TTTCGATTAC ATTTGATGTT 2875 .......... .......... .......... .......... .......... .......... 148 TTCTTAATCA ACCTAATTTT CGATTGTTAC TTATGTGAAT TAGAGGTTGA TCTACATGTA 2815 .......... .......... .......... .......... .......... .......... 148 ATTTATGTGT TCACACAACA CCTGTTTGAA TGTGCGTTTT ATTTAGGAAA ATAGAGAATT 2755 .......... .......... .......... .......... .......... .......... 148 ATTTGAAGAT CGGATCAAAT TTTCATGATC AAACAGATAT TTGTCAAAAT TCATGGCCAA 2695 .......... .......... .......... .......... .......... .......... 148 ACCTTATCAA TGTATATTAA TTTGACTTCG TGGTAAACTT TAAATTTTGA ATCAAAGTAT 2635 .......... .......... .......... .......... .......... .......... 148 GTGAAGTTGA CATTTAGGTC TATGCCTAGT CAAACGATGT CAAATAAAAT AGAATCGAGG 2575 .......... .......... .......... .......... .......... .......... 148 AATATGAATC AAAAATCGAT AATCATCTTG GCTAATTTGA TTGATACTCT GTATTTTATT 2515 .......... .......... .......... .......... .......... .......... 148 TTATTTTTTA ATTTAAAAAA TGTTATTTTG TGTGATACAG ATGATATGGA TCCATATGTG 2455 |||||||||| |||||||||| .......... .......... .......... .......... ATGATATGGA TCCATATGTG 168 ATCTTAACTT ATAGATCTCA GGAGAAAAAG AGTACTGTTG CATCAGGTAC ATTTGTTAAT 2395 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ATCTTAACTT ATAGATCTCA GGAGAAAAAG AGTACTGTTG CATCAG.... .......... 214 AATCTTTGGT TAATTATTAC TTAGTTATTA GTTACCTATG TTTTTTTTAA GAAAAATGAA 2335 .......... .......... .......... .......... .......... .......... 214 ATGAAGTTTG ATCAATCGAT ATTTATAATG TTAAATTTTC ATAGGGAAGG GATGTGAACC 2275 |||||| |||||||||| .......... .......... .......... .......... ....GGAAGG GATGTGAACC 230 AGAATGGAAT GAAACATTTG TTTTCTCCAT TTCTGAGGAT GCTGAAGAAC TCTTCTTGAA 2215 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAATGGAAT GAAACATTTG TTTTCTCCAT TTCTGAGGAT GCTGAAGAAC TCTTCTTGAA 290 GATAATGGAC AGTGATTCTA TCGGCGAGGA CGATATTGTT GGGGAAGCTA AGTAAGTATA 2155 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | GATAATGGAC AGTGATTCTA TCGGCGAGGA CGATATTGTT GGGGAAGCTA A......... 341 TCTAATTAGA GGCGAATCTA AGATTATACG TATTTTCTCT ATATTAACAT AGTTTGAGTT 2095 .......... .......... .......... .......... .......... .......... 341 TGATAGTACA TGCATCCATG ACTTGTATAT GTTGAGATAA ATAGACGTAT ATGACTTTAG 2035 .......... .......... .......... .......... .......... .......... 341 ATAAGAAGAC GTGGAGGTCG AAAATTAGGG TAGAAGGTTA GTAGTTAGTG AGCCTGAGTG 1975 .......... .......... .......... .......... .......... .......... 341 TTGTTGCACT TGTTATTGGA GAGGAAGAGG GCTAGCCTAG TCTCTACTTC TCCTTTTTAG 1915 .......... .......... .......... .......... .......... .......... 341 TAGTAGTATT TTGTATATCG CGTAGTTTCC TTTCTTTAAT GATTATTACA ATCAGTTGCT 1855 .......... .......... .......... .......... .......... .......... 341 TCATTTGATT TGTATCTTGC TATTTTGTCG TTTTATTTAC TTGCACCATG CTTTTTCTTT 1795 .......... .......... .......... .......... .......... .......... 341 TCTTTTCTTT TGAGTTCAGG GTCCTTCGTG AACAACCTGC AAAGGTAGGG GTATGTTCAG 1735 .......... .......... .......... .......... .......... .......... 341 CGTACATCGA TATCCTACCT TCCCAATATC CAACTTGTGA AATTACACTG AATATATAGT 1675 .......... .......... .......... .......... .......... .......... 341 TATTTTTGTG GTTGTTGTAG TATACATCTA CTTTCTAGTG GTGTTATACA AACCATGGTT 1615 .......... .......... .......... .......... .......... .......... 341 TAAACGGTTG AGATTATTAG TTCATGGAGT CGAATAAGCA TTTGCCTAAA ACAGTTGAGA 1555 .......... .......... .......... .......... .......... .......... 341 TTATTAGTTC ATGGAGTCGA ATAAGCATTT CCCTAAAACA GTTGAGATTA TTAGTTCATG 1495 .......... .......... .......... .......... .......... .......... 341 GAGTCGAATA AGCATTTGCC TAAAACAGTT GAGATTATTA GTTCATGGAG TCGAATAAGC 1435 .......... .......... .......... .......... .......... .......... 341 ATTTGCCTAA AACAGTTGAG ATTATTAGTT CATGGAGTCG AATAAGCATT TGCCTAAAAC 1375 .......... .......... .......... .......... .......... .......... 341 AGTTGAGATT ATTAGTTCAT GGAGTCGAAT AAGCATTTGC CTAAAACAGT TGAGATTATT 1315 .......... .......... .......... .......... .......... .......... 341 AGTTCATGGA GTCGAATAAG CATTTGCCTA AAACAGTTGA GATTATTAGT TCATGGAGTC 1255 .......... .......... .......... .......... .......... .......... 341 GAATAAGCAT TTGCCTAAAA CAGTTGAGAT TATTAGTTCA TGGAGTCGAA TAAGCATTTG 1195 .......... .......... .......... .......... .......... .......... 341 CCTAAAACAG TTGAGATTAT TAGTTCATGG AGTCGAATAA GCATTTACCT ATCAGAGACG 1135 .......... .......... .......... .......... .......... .......... 341 AATCTAAGAT TTATACAATT TCTGTATATA CAATTTCTGT ATATATATAT ATATATATAT 1075 .......... .......... .......... .......... .......... .......... 341 ATGCAAACAT AATCTGAGTT TGCTAGTATT GGTTTTGAGA TATGTTCAAT AATATGTTAC 1015 .......... .......... .......... .......... .......... .......... 341 TTGCAGGATA CCAATTGAAC CAGTTTTTTC AGAAGGGAGC ATCCCAATAA CATGT 960 |||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| ......GATA CCAATTGAAC CAGTTTTTTC AGAAGGGAGC ATCCCAATAA CATGT 390 hqPGS_C08HBa0235H18.1-_SGN-E289946+ (3114 2967,2474 2409,2290 2164,1008 960) ******************************************************************************** EST sequence 462 +strand 196 n (File: SGN-E294394+) 1 AAAAGAAAAC GATCTCTGTC CGAAAATTCG TGCGAGAATC TGTTTTTTTT TCCTGGGAAT 61 CTGCTAAGAG TTTGATTGAA AATGGTACGA GGAAAACTTG TAGTTTAACT TGTTGGAGCT 121 AAAGGCCTTG AAAACACTGA TTTTCTCAAT GATATGGATC CATATGTGAT CTTAACTTAT 181 AGATCTCAGG AGAAAA Predicted gene structure (within gDNA segment 3714 to 1817): Exon 1 3114 2967 ( 148 n); cDNA 1 148 ( 148 n); score: 0.993 Intron 1 2966 2475 ( 492 n); Pd: 0.999 (s: 0.98), Pa: 0.999 (s: 1.00) Exon 2 2474 2427 ( 48 n); cDNA 149 196 ( 48 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E294394+ 0.993 196 1.000 C PGS_C08HBa0235H18.1-_SGN-E294394+ (3114 2967,2474 2427) Alignment (genomic DNA sequence = upper lines): AAAAGAAAAC GATCTCTGTC CGAAAATTCG TGCGAGAATC TGTTTTTTTT TCCTGGGAAT 3055 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAGAAAAC GATCTCTGTC CGAAAATTCG TGCGAGAATC TGTTTTTTTT TCCTGGGAAT 60 CTGCTAAGAG TTTGATTGAA AATGGTACGA GGAAAACTTG TAGTTCAACT TGTTGGAGCT 2995 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| CTGCTAAGAG TTTGATTGAA AATGGTACGA GGAAAACTTG TAGTTTAACT TGTTGGAGCT 120 AAAGGCCTTG AAAACACTGA TTTTCTCAGT AAGTTTTTTG TTTTTTTTTC TAATTTATTT 2935 |||||||||| |||||||||| |||||||| AAAGGCCTTG AAAACACTGA TTTTCTCA.. .......... .......... .......... 148 GTTTTGATCT GATCAGATTA ATGTATAGAT CTCTTTTTTC TTTCGATTAC ATTTGATGTT 2875 .......... .......... .......... .......... .......... .......... 148 TTCTTAATCA ACCTAATTTT CGATTGTTAC TTATGTGAAT TAGAGGTTGA TCTACATGTA 2815 .......... .......... .......... .......... .......... .......... 148 ATTTATGTGT TCACACAACA CCTGTTTGAA TGTGCGTTTT ATTTAGGAAA ATAGAGAATT 2755 .......... .......... .......... .......... .......... .......... 148 ATTTGAAGAT CGGATCAAAT TTTCATGATC AAACAGATAT TTGTCAAAAT TCATGGCCAA 2695 .......... .......... .......... .......... .......... .......... 148 ACCTTATCAA TGTATATTAA TTTGACTTCG TGGTAAACTT TAAATTTTGA ATCAAAGTAT 2635 .......... .......... .......... .......... .......... .......... 148 GTGAAGTTGA CATTTAGGTC TATGCCTAGT CAAACGATGT CAAATAAAAT AGAATCGAGG 2575 .......... .......... .......... .......... .......... .......... 148 AATATGAATC AAAAATCGAT AATCATCTTG GCTAATTTGA TTGATACTCT GTATTTTATT 2515 .......... .......... .......... .......... .......... .......... 148 TTATTTTTTA ATTTAAAAAA TGTTATTTTG TGTGATACAG ATGATATGGA TCCATATGTG 2455 |||||||||| |||||||||| .......... .......... .......... .......... ATGATATGGA TCCATATGTG 168 ATCTTAACTT ATAGATCTCA GGAGAAAA 2427 |||||||||| |||||||||| |||||||| ATCTTAACTT ATAGATCTCA GGAGAAAA 196 hqPGS_C08HBa0235H18.1-_SGN-E294394+ (3114 2967,2474 2427) ******************************************************************************** EST sequence 1148 -strand 666 n (File: SGN-E323238-) 1 CAATGGTCAA ATTAAAAATC AAGTGTATCC TTTCGATGAA TGATCGAAAG AACCACTTTA 61 GTAAATGATA TTATTCAGAT TTGAGACGAA AGAACTCCTT TGCTATCAAA ATATCCAATA 121 TTTCGAAAAA ATTTCATTGA TTACCCATAG TCAGGAATAG AATAATTGAG GGAAAGATAT 181 TAGGATGATA AAAAAAAAAT GACTAGCAAA GGATAAATTG GCTAGTTCTC AGTATTTAAT 241 TAAGAAATCC AATTGTTGGT CATTAAAGAA TACAAAAGAA AGAATTTCAA ATTTACAAGA 301 TACGATCTAT CTGGATCTAA AGTGTCAATT CCAACAAATA TTGAACTAAA AAAAATTCTT 361 GCTTTCGAAA TGGTTTGCCG TCTGAGATGA ATCTATTATT TCGATTTGTT ATTTGTTATT 421 GAATTGCGTG CACATAAAGA CCATAAAAAG AGTTTCGTTT TATGGTTCTT TCATATACGT 481 TTTCTTTAAT TGAATGAACG TTCTGATTCT CAATTTATCA AAATACTTCA ATTGGTACAC 541 GCAAGAAATA GGCTAATTCA GCAGCCTTTT GTTCAATTTC TCGTGGAGTC AAATTCTCAT 601 CAGTACGGGT CAAGGGAATG GACCCCTGGC CTCGGATGTC CATATAAAGA ACACGACGAG 661 CATAAA Predicted gene structure (within gDNA segment 1 to 4406): Exon 1 220 232 ( 13 n); cDNA 420 430 ( 11 n); score: 0.769 Intron 1 233 898 ( 666 n); Pd: 0.573 (s: 0), Pa: 0.710 (s: 0) Exon 2 899 906 ( 8 n); cDNA 431 439 ( 9 n); score: 0.438 Intron 2 907 950 ( 44 n); Pd: 0.976 (s: 0), Pa: 0.000 (s: 0.52) Exon 3 951 1003 ( 53 n); cDNA 440 492 ( 53 n); score: 0.547 Intron 3 1004 2298 (1295 n); Pd: 0.900 (s: 0.54), Pa: 0.000 (s: 0.60) Exon 4 2299 2359 ( 61 n); cDNA 493 551 ( 59 n); score: 0.607 Intron 4 2360 3610 (1251 n); Pd: 0.664 (s: 0.60), Pa: 0.326 (s: 0.96) Exon 5 3611 3724 ( 114 n); cDNA 552 665 ( 114 n); score: 0.947 MATCH C08HBa0235H18.1+ SGN-E323238- 0.763 249 0.374 C PGS_C08HBa0235H18.1+_SGN-E323238- (220 232,899 906,951 1003,2299 2359,3611 3724) Alignment (genomic DNA sequence = upper lines): TGAAATAGTC GTGGCGAGTT GGATCGAACA CCATCATATG TTTTGAAAAT GAGAAGAAAT 279 |||| | | | ||| TGAATT-G-C GTG....... .......... .......... .......... .......... 430 AAAGAGCGTT AAGGACAAAG TTAGAGTGAT TTCTTCACAT CATATGTTTT GAAAATGAGA 339 .......... .......... .......... .......... .......... .......... 430 AGAAATAAAG AGCGTTAAGG ACAAAGTTAG AGTGATTTCT TCACAATAAT TTCTAGATAT 399 .......... .......... .......... .......... .......... .......... 430 TTGACTTGAT TATCTCATAA CTTGACATTG TTGTTCTGCA TAATAACAAA CCTTACATTG 459 .......... .......... .......... .......... .......... .......... 430 TAGCATATGA TAAAATAATT TAACTTGAAA AATGAAAAGA AAATCCCAAC ATTTTTATTA 519 .......... .......... .......... .......... .......... .......... 430 CAGTAACCCG TATAGACTCA AAATAGCTCT TTTCTTTTTT ACTATATGAA ATCCACACTT 579 .......... .......... .......... .......... .......... .......... 430 TTAACACTTG AAAATGTTAT AACGGGTAAG ATAAGTTCAT AATTTAAGCA AGAACAAATT 639 .......... .......... .......... .......... .......... .......... 430 GATCAGTCGA GTAATGCTTC ACATCAATAA GAAGACTCTT TCCATCCACC AAGGTTCTCT 699 .......... .......... .......... .......... .......... .......... 430 TCTTCATACT CCCTCTCAGA ATATTCCTAC AAAAACATAG CAAAATATAT CATGCACATA 759 .......... .......... .......... .......... .......... .......... 430 GAATACCTAT TATACTTGCA TGTTACGAGT TCCTTTATTC ATATAGCCAA TCTGAACTTG 819 .......... .......... .......... .......... .......... .......... 430 TTAGCTCGGG ATTGAGGCAT AACCTTTTTT TTTTTTTTTT TTATAAATCA ATAAAATTTT 879 .......... .......... .......... .......... .......... .......... 430 AGAAAGTAAC TTGCCTCAGG A-GTAAAGGT GAGACCAACT TTAATTTCTC CACAATATTC 938 | ||||| .......... .........C ACATAAAG.. .......... .......... .......... 439 CTCATCTTTA ACAACATTAT AACATGTTAT TGGGATGCTC CCTTCTGAAA AAACTGGTTC 998 | ||| | || | || | ||| | | ||| | | | || .......... ..ACCATAAA AAGAGTTTCG TTTTATGGTT CTTTCATATA CGTTTTCTTT 487 AATTGGTATC CTGCAAGTAA CATATTATTG AACATATCTC AAAACCAATA CTAGCAAACT 1058 ||||| AATTG..... .......... .......... .......... .......... .......... 492 CAGATTATGT TTGCATATAT ATATATATAT ATATATACAG AAATTGTATA TACAGAAATT 1118 .......... .......... .......... .......... .......... .......... 492 GTATAAATCT TAGATTCGTC TCTGATAGGT AAATGCTTAT TCGACTCCAT GAACTAATAA 1178 .......... .......... .......... .......... .......... .......... 492 TCTCAACTGT TTTAGGCAAA TGCTTATTCG ACTCCATGAA CTAATAATCT CAACTGTTTT 1238 .......... .......... .......... .......... .......... .......... 492 AGGCAAATGC TTATTCGACT CCATGAACTA ATAATCTCAA CTGTTTTAGG CAAATGCTTA 1298 .......... .......... .......... .......... .......... .......... 492 TTCGACTCCA TGAACTAATA ATCTCAACTG TTTTAGGCAA ATGCTTATTC GACTCCATGA 1358 .......... .......... .......... .......... .......... .......... 492 ACTAATAATC TCAACTGTTT TAGGCAAATG CTTATTCGAC TCCATGAACT AATAATCTCA 1418 .......... .......... .......... .......... .......... .......... 492 ACTGTTTTAG GCAAATGCTT ATTCGACTCC ATGAACTAAT AATCTCAACT GTTTTAGGCA 1478 .......... .......... .......... .......... .......... .......... 492 AATGCTTATT CGACTCCATG AACTAATAAT CTCAACTGTT TTAGGGAAAT GCTTATTCGA 1538 .......... .......... .......... .......... .......... .......... 492 CTCCATGAAC TAATAATCTC AACTGTTTTA GGCAAATGCT TATTCGACTC CATGAACTAA 1598 .......... .......... .......... .......... .......... .......... 492 TAATCTCAAC CGTTTAAACC ATGGTTTGTA TAACACCACT AGAAAGTAGA TGTATACTAC 1658 .......... .......... .......... .......... .......... .......... 492 AACAACCACA AAAATAACTA TATATTCAGT GTAATTTCAC AAGTTGGATA TTGGGAAGGT 1718 .......... .......... .......... .......... .......... .......... 492 AGGATATCGA TGTACGCTGA ACATACCCCT ACCTTTGCAG GTTGTTCACG AAGGACCCTG 1778 .......... .......... .......... .......... .......... .......... 492 AACTCAAAAG AAAAGAAAAG AAAAAGCATG GTGCAAGTAA ATAAAACGAC AAAATAGCAA 1838 .......... .......... .......... .......... .......... .......... 492 GATACAAATC AAATGAAGCA ACTGATTGTA ATAATCATTA AAGAAAGGAA ACTACGCGAT 1898 .......... .......... .......... .......... .......... .......... 492 ATACAAAATA CTACTACTAA AAAGGAGAAG TAGAGACTAG GCTAGCCCTC TTCCTCTCCA 1958 .......... .......... .......... .......... .......... .......... 492 ATAACAAGTG CAACAACACT CAGGCTCACT AACTACTAAC CTTCTACCCT AATTTTCGAC 2018 .......... .......... .......... .......... .......... .......... 492 CTCCACGTCT TCTTATCTAA AGTCATATAC GTCTATTTAT CTCAACATAT ACAAGTCATG 2078 .......... .......... .......... .......... .......... .......... 492 GATGCATGTA CTATCAAACT CAAACTATGT TAATATAGAG AAAATACGTA TAATCTTAGA 2138 .......... .......... .......... .......... .......... .......... 492 TTCGCCTCTA ATTAGATATA CTTACTTAGC TTCCCCAACA ATATCGTCCT CGCCGATAGA 2198 .......... .......... .......... .......... .......... .......... 492 ATCACTGTCC ATTATCTTCA AGAAGAGTTC TTCAGCATCC TCAGAAATGG AGAAAACAAA 2258 .......... .......... .......... .......... .......... .......... 492 TGTTTCATTC CATTCTGGTT CACATCCCTT CCCTATGAAA ATTTAACATT ATAAATATCG 2318 | | ||| || | | | || .......... .......... .......... .......... AATGAACGTT CTGATTCTCA 512 ATTGATCAAA CTTCATTTCA TTTTTCTTAA AAAAAACATA GGTAACTAAT AACTAAGTAA 2378 ||| |||||| | | || | || | | || | ||| | ATTTATCAAA ATAC-TTCAA TTGGT-ACAC GCAAGAAATA G......... .......... 551 TAATTAACCA AAGATTATTA ACAAATGTAC CTGATGCAAC AGTACTCTTT TTCTCCTGAG 2438 .......... .......... .......... .......... .......... .......... 551 ATCTATAAGT TAAGATCACA TATGGATCCA TATCATCTGT ATCACACAAA ATAACATTTT 2498 .......... .......... .......... .......... .......... .......... 551 TTAAATTAAA AAATAAAATA AAATACAGAG TATCAATCAA ATTAGCCAAG ATGATTATCG 2558 .......... .......... .......... .......... .......... .......... 551 ATTTTTGATT CATATTCCTC GATTCTATTT TATTTGACAT CGTTTGACTA GGCATAGACC 2618 .......... .......... .......... .......... .......... .......... 551 TAAATGTCAA CTTCACATAC TTTGATTCAA AATTTAAAGT TTACCACGAA GTCAAATTAA 2678 .......... .......... .......... .......... .......... .......... 551 TATACATTGA TAAGGTTTGG CCATGAATTT TGACAAATAT CTGTTTGATC ATGAAAATTT 2738 .......... .......... .......... .......... .......... .......... 551 GATCCGATCT TCAAATAATT CTCTATTTTC CTAAATAAAA CGCACATTCA AACAGGTGTT 2798 .......... .......... .......... .......... .......... .......... 551 GTGTGAACAC ATAAATTACA TGTAGATCAA CCTCTAATTC ACATAAGTAA CAATCGAAAA 2858 .......... .......... .......... .......... .......... .......... 551 TTAGGTTGAT TAAGAAAACA TCAAATGTAA TCGAAAGAAA AAAGAGATCT ATACATTAAT 2918 .......... .......... .......... .......... .......... .......... 551 CTGATCAGAT CAAAACAAAT AAATTAGAAA AAAAAACAAA AAACTTACTG AGAAAATCAG 2978 .......... .......... .......... .......... .......... .......... 551 TGTTTTCAAG GCCTTTAGCT CCAACAAGTT GAACTACAAG TTTTCCTCGT ACCATTTTCA 3038 .......... .......... .......... .......... .......... .......... 551 ATCAAACTCT TAGCAGATTC CCAGGAAAAA AAAACAGATT CTCGCACGAA TTTTCGGACA 3098 .......... .......... .......... .......... .......... .......... 551 GAGATCGTTT TCTTTTTTTT TTTTTTTGTT TCGATGAAGA ATATGTTGAG CTGATGTGTA 3158 .......... .......... .......... .......... .......... .......... 551 TTTATATGTG AACAAAAGAC CGGTTTAAAG TGGGGTTAGA CCGGTGAGTG TAAAGTGAAC 3218 .......... .......... .......... .......... .......... .......... 551 CGGACGGTTT AGGCGAAAAT CACATTTTAG ACCAAAAAAG GCAAAAAAGA AAATCACATT 3278 .......... .......... .......... .......... .......... .......... 551 TTACGCACCT AAATTATTTC GAGTATGAAA AACATATTTA AACTAATAAT AATAAGTTTG 3338 .......... .......... .......... .......... .......... .......... 551 AGAAATATAC TTCAAGTAAT ATGTGATGTC GTGTGTATTA CGTGTATACA CACATTTGAT 3398 .......... .......... .......... .......... .......... .......... 551 TATGTTAGAT TGCGTTGGCG AAAAAAAAGC CACGTGGATT ATTTTTTTTT TTGGATCAAA 3458 .......... .......... .......... .......... .......... .......... 551 TGCGTCGGAG TGTGCATTTG GTCTGGTTAG AATTGAATTG TGTTTTTTTT TCTTCAAATT 3518 .......... .......... .......... .......... .......... .......... 551 AATGAGTGGT AATATTGTAG AAATGAATCA ATAGAATCTT CTTCATTTTA AGATTTTAGG 3578 .......... .......... .......... .......... .......... .......... 551 TTTCAATTAT TCGTTTTTGT GACTGAAAAA AGGCTAATTC AGCAGCTTTT TGTTCAATTT 3638 |||||||| |||||| ||| |||||||||| .......... .......... .......... ..GCTAATTC AGCAGCCTTT TGTTCAATTT 579 CTCGTGCAGT CAAATTCTCA TCAGTACAGG TCAAGAGAAT GGACCCCTGG CCTCGGATGT 3698 |||||| ||| |||||||||| ||||||| || ||||| |||| |||||||||| |||||||||| CTCGTGGAGT CAAATTCTCA TCAGTACGGG TCAAGGGAAT GGACCCCTGG CCTCGGATGT 639 CCATATAAAG AACACGACAA ACATAA 3724 |||||||||| |||||||| | ||||| CCATATAAAG AACACGACGA GCATAA 665 hqPGS_C08HBa0235H18.1+_SGN-E323238- (3611 3724) ******************************************************************************** EST sequence 26 -strand 786 n (File: SGN-E210798-) 1 GGTAGAGATC AGTTGACTAA TGAGGGCGAT TTAAAATGAA GAAACTCAAA TTCACTTGGC 61 CACTTCATCA GTACTTGCAG GCATCTCCAA GGGGAAATTT GGATCAGCAA CACCATTAGG 121 ACAAAAGACA ACCCTATAGT TTGTACTACC ACCANGGGCA AGTAAATGTG CTTGTAGGAT 181 CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG GACAACTCTG 241 TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT 301 TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC 361 AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT 421 TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT 481 ACTCGGCTAG GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT 541 CACCAGTCTG ACATGTACCT CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA 601 TACGTGCCAT CTTAGTTCCC CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC 661 GTCGACCACC GCCTATCGGA GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA 721 CCTCAATAGT GGCAGCATAA GTATAAGTCA CACAAAGAAG GAAGAAGAGA ACAAAAGAAG 781 ATGTCA Predicted gene structure (within gDNA segment 11582 to 3026): Exon 1 8552 8503 ( 50 n); cDNA 62 111 ( 50 n); score: 0.760 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0.76), Pa: 0.189 (s: 0.68) Exon 2 5349 4672 ( 678 n); cDNA 112 786 ( 675 n); score: 0.785 MATCH C08HBa0235H18.1- SGN-E210798- 0.784 728 0.926 C PGS_C08HBa0235H18.1-_SGN-E210798- (8552 8503,5349 4672) Alignment (genomic DNA sequence = upper lines): ACTTCAAGAG TACTTGTAGG CATCTCCAAT GGGAAATTTG TTGTTTCATT GTGAGTAGAG 8493 |||||| || |||||| ||| ||||||||| |||||||||| || ACTTCATCAG TACTTGCAGG CATCTCCAAG GGGAAATTTG GATCAGCAAC .......... 111 CCATAAGGAC AGAACATTAT CTTGTAGTCT GTAGTCCAAC TCTGACAAGT AAAAGTACTA 8433 .......... .......... .......... .......... .......... .......... 111 GTTGGATCGT CTTGAGGGTA ACTATAGGCA TCAGGACATC TTTGTTTGAA AAATCTTGAC 8373 .......... .......... .......... .......... .......... .......... 111 AATTCAGTAG GACCACATGG ACCGTGATTA CAACAATATT GTTGTCCTCC GAATGTTGTA 8313 .......... .......... .......... .......... .......... .......... 111 CAAGGGTTGT TACATCCTCC AGGTACCCTA AGTGAACCAG GGCATTCACC GTTTATATTG 8253 .......... .......... .......... .......... .......... .......... 111 GCTGTGCATT GAATTGGATG ACATTTTCCA GGGCCAGGCT TAGTTGGGCC AAAAGACATA 8193 .......... .......... .......... .......... .......... .......... 111 GGGATGTTGA ATCCATCAAT AACAGAAATA TCCCAAAAAT CTAGGTTACC AAACTGGTTC 8133 .......... .......... .......... .......... .......... .......... 111 AAAGCGTATT CAGCTAAGGT GTTTGGTGGT TTACCCCATC CTTTGCAATC CAGGACTCCA 8073 .......... .......... .......... .......... .......... .......... 111 CCACAATCAC CAGTCTGGCA CCAACCTCTT CCAGCACCAT CAAAGTTGCA ATTAGTACGA 8013 .......... .......... .......... .......... .......... .......... 111 CCCCAAATAC GTGCCATTTT AGTGCCAGGT GGGGCCCAAA ACCACCAACT CTGACCTCTC 7953 .......... .......... .......... .......... .......... .......... 111 TCGAGACGTC GACCACCTCC TACGGGGACC GCTGCCGCCC AAACGGTGTA GGGGCAGTTG 7893 .......... .......... .......... .......... .......... .......... 111 TTATGGACCT CAAATACACC GGAACCATAA GTGTAAGTCA CAAAGGCAAG GAGAAAAAAC 7833 .......... .......... .......... .......... .......... .......... 111 ACTAAACAAG TTGTCAAGTG ACTCATTTTA GTATAAGAAG TTGTAGGATA TATTTGCATA 7773 .......... .......... .......... .......... .......... .......... 111 TCGAGCTAGG GGTTTATATA GTGGTATGGC GGCTTTTTTT CACTATGGAC ATTAATCATA 7713 .......... .......... .......... .......... .......... .......... 111 TAAATATTGG CACTTGTTAT AAACATATAT AGAAAATTAA AAAAAAAAAT TGTATCCAAA 7653 .......... .......... .......... .......... .......... .......... 111 ATATCTCCAC TTGAAAAAAA AAGCCGCCAA TATAATATGA GTACAGCCTA TTATAAGTAA 7593 .......... .......... .......... .......... .......... .......... 111 TATATTTTGT TCACTCCAGT CATATTTCAC AGTTCAACTT TTTGCTATTT TGAAAATTTA 7533 .......... .......... .......... .......... .......... .......... 111 TGCATTAACA CATTATGATA TTTATAATGA TTAAAAAAAA AAGAGAAGAT ATTTTTTAAT 7473 .......... .......... .......... .......... .......... .......... 111 TAAGTGATAT ATACGTATTA TTAGTTTTGT GTTTAACTAT ATATTAATTT TAAATTATTT 7413 .......... .......... .......... .......... .......... .......... 111 AGTTTAGTAT ATACAACAAA TCGGAAAAAT GCATGGCAGG GCATGAAACC TAAAATTGTG 7353 .......... .......... .......... .......... .......... .......... 111 GAAAATTTCC TAATTTTTTT TGAACATTTT TTCATGAGAA ATTTAGTTAG TAGAGAATTC 7293 .......... .......... .......... .......... .......... .......... 111 TCTTCATAAT TTTTATTGGT TATGTTTTCA TAAATAAAAT AACTTAAAAA TTTTGAATTA 7233 .......... .......... .......... .......... .......... .......... 111 CAAATTTGTA ATTTTTGTTT ACAGACAATT GCCTTTTTTC CCTTGATTAT TTTTTTCCGT 7173 .......... .......... .......... .......... .......... .......... 111 CGTATATATA TAGTGGATTT TTATATTAAA TTATTTATAG CATATTTATC AAGTGGACAT 7113 .......... .......... .......... .......... .......... .......... 111 AATAATTAAT TGAAAATGTG CATGCATTCT ACAGTCAAAA AAGTTGAGCA AATGGGTAGG 7053 .......... .......... .......... .......... .......... .......... 111 CGTAGAGATG AGTGGAACCT TAAAAGTTTG AATTTTTTTT TTATTCGATA CAAGCTATGT 6993 .......... .......... .......... .......... .......... .......... 111 AGGTCTTGTT TCACACGAGA AAAATGAATT TTGAAATTAG TTATGAATTT CGTTACTAAT 6933 .......... .......... .......... .......... .......... .......... 111 CTATCTCTAA TATGCAAAGT TTTGAATAAT CTATCCCTAA TTGGTTACTA GATATAGAAC 6873 .......... .......... .......... .......... .......... .......... 111 TAGCAATGAT TTTTGTTATT GATTGAATAA TTTGTTCGAT ATTGATTTTT GTTTTATGTT 6813 .......... .......... .......... .......... .......... .......... 111 TCCTCCGTCC GATATTGTTT GTTATGGTTT CTATTTATAG ACTCAAACTA TAAAAACTTT 6753 .......... .......... .......... .......... .......... .......... 111 GACTAACATT TGAAGATACA TTTTTTTATC ATATTAATAT GAAAAGATTG TAATTTATAG 6693 .......... .......... .......... .......... .......... .......... 111 TACTTTTCAT ATTGTTTTAG AATATTTAAT TTTTTTGGTT TAAAGTATCG AATTAATGTG 6633 .......... .......... .......... .......... .......... .......... 111 ATTTAATTTA CCTTTAGAAA TCAATCAAAA TTGACTTTCG ATAAGCGTAA CATGACAAAT 6573 .......... .......... .......... .......... .......... .......... 111 ATTTCTGGAC GGAGGGAGTA TTGATTTTTT ATCGTTGTCA TCATGGTCGT CTTTGTTTGT 6513 .......... .......... .......... .......... .......... .......... 111 TGGTTCATAA TAAGATATTC TTGAGTTTAA ATGAGATGAT TGTATATTTG AGTTTAATTT 6453 .......... .......... .......... .......... .......... .......... 111 TGGAACATGC AAGAGTTTTT GGATTTGATT TTGATCGGTA GATGTACTAG TACCTGCCAC 6393 .......... .......... .......... .......... .......... .......... 111 CAAAACATCG TGAAGGATTC AGTGAACGAC TTGAAACTTA GTAACACAAG ACAATTCACT 6333 .......... .......... .......... .......... .......... .......... 111 GAATGGTTGT TGGCTCTACC GGAGGAGTCT GAAATCAACA ACGTGTAACT GCTTGGGCAG 6273 .......... .......... .......... .......... .......... .......... 111 AATAAAAGAA CTTAAATTGT TTTAATAGAA TTTTTTAAGT AACATTGCAA TTATTTAAGC 6213 .......... .......... .......... .......... .......... .......... 111 AATACGAACG CCCAATTGTA TTTTATTTTA TTTTTTTATA ATAAAAGAGT TTTGGAAGTA 6153 .......... .......... .......... .......... .......... .......... 111 ATGAATTTTA ATACAATATC AATATTTAAA TAATGTTGAA TTCTTAGCTT AGGCATTGAA 6093 .......... .......... .......... .......... .......... .......... 111 TCGCAATTGA AAGTGAAAGC CCTTTTTTGC TATTTCAAGT TATGAATTCA GATACTAAAG 6033 .......... .......... .......... .......... .......... .......... 111 GATAACGTCT TTTAGAAGGA AGATATTAAT GGGGTAAGTG ATTTTTAAAA GTTGACTTTT 5973 .......... .......... .......... .......... .......... .......... 111 ATATAAAATT ATCTTCTTCT TTTTTCTTTT TCTTTTTTGT ATATCGACTC ATTTAATTAT 5913 .......... .......... .......... .......... .......... .......... 111 CAGTTTAACT TAATGTTCGA ATCTTTAAGC TTTTTAATTA ATATTGAATT TATTATTTCT 5853 .......... .......... .......... .......... .......... .......... 111 TTAAACTTAT AAATTCAAAT CTAAACACTT ATTAAAATTT TAATGAATTT TCATATACTA 5793 .......... .......... .......... .......... .......... .......... 111 TAGTATACTT GAAAATGTTC CAAAAGCCGC CAATAAAAAA ATATTTCCAT CTGTTTGACT 5733 .......... .......... .......... .......... .......... .......... 111 TATATTATGA CATGTAACGA GTTGTCCCTA CAATTTTATA TTTTCAGATC TAGGTACTTT 5673 .......... .......... .......... .......... .......... .......... 111 AATATATTAA CTAGACTAAT TTTTTTTCAT TATAATTAAA AATTTTAAGA AAAAAACTGT 5613 .......... .......... .......... .......... .......... .......... 111 ACTCCAGATA TAATTTCAAT TTAAAATTAA AATACCATAT ATAAGACAAA GCATCGATCA 5553 .......... .......... .......... .......... .......... .......... 111 TAGATTGTTA TTCAGATCTT AGCCACTTCA AACAAACAAA TGTAAAAGAA ATGTGTACAA 5493 .......... .......... .......... .......... .......... .......... 111 GGCAAATTAA AGACAATGTC CATCTTCAAA ACAAATTTAA CAAAAAAGAG ATTGGCTCAA 5433 .......... .......... .......... .......... .......... .......... 111 CTCAAGATTT CTACTTAATT AAGCCACTTC AAGAGTATTT GTAGGAATCT CCAATGGGAA 5373 .......... .......... .......... .......... .......... .......... 111 ATTTGTTGTT TCATTGTGAG TAGAGCCATA AGGACAAAAC ATAACCTTGT AGTCTGTAGT 5313 | |||| ||||||||| | |||| | | ||| |||| | .......... .......... ...A-CCATT AGGACAAAAG ACAACCCTAT AGTTTGTACT 147 -CCAACTCTG ACAAGTAAAA GTACTTGTTG GATCGTCTTG AGGATAACTA TAGGCATCGG 5254 ||| | | |||||||| || ||||| | |||||||||| || || ||| || ||||||| ACCACCANGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA TAAGCATCGG 207 GACATCTTTG TTTGAAAAAT CTTGACAAAT CGGTAGGACC ACATGGACCT TGAGTGCAAC 5194 ||||||||| ||||||||| | ||||| | | ||||| || |||||||||| || ||||||| GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT TGGGTGCAAC 267 AATATTGTTG TCCTCCGAAT GTAGTACAAG GGTTGTTACA TCCTCCGGGT ACCCTAAGTG 5134 |||||||||| |||||| || || ||||||| |||||||||| |||||| ||| ||| |||| | AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACCTTAAGGG 327 AACCAGGGCA TTCACCGTTT ATATTAGCAA CACATTGAAT TGGATGACAT TTTCCCGGCC 5074 | ||| || |||||| ||| ||||| || || ||||| || |||||| ||||| | CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC 387 CAGGGTTAGT TGGGCCGAAA GACATAGGGA TGTTGAATCC ATCAATAACA GAAATGTCCC 5014 ||| || || |||| | ||| | ||| || | | || ||||| ||| | | | |||||||||| TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC 447 AGAAATCTAA GTTGCTAAAT TGATTCAAAG CGTATTCAGC TAAGGTGTTT GGTGGTTTAC 4954 | |||||||| ||||||||| || | ||| | |||| || || || ||||||| || ||||| | AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC 507 CCCATCCTTT GCATTCCAAG ACTCCACCAC AATCACCGGT CTGGCACCAA CCTCTACCAG 4894 ||||||| | || | ||| |||||||||| ||||||| || ||| || | ||||| || | CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG 567 CACCATCAAA ATTGCAATTA GTACGACCCC AAATACGTGC CATTTTGGTG CCCGGTGGAG 4834 || ||| ||| |||||| | |||||||||| | |||||||| ||| || || ||| |||| CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG 627 CCCAAAACCA CCAACTTTGA CCTCTCTCGA GACGTCGGCC ACCTCCTACG GGAGTCGCCG 4774 | | ||| |||| |||| | || ||||||| || ||| |||| ||||||| | CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC GGAGTCGATG 687 CTGCCCATAC GGTGTATGGA CAGTTGTTAT GGACCTCAAA TACACCGGAA GCATAAGTGT 4714 | ||||| || |||||||||| |||||||| | ||||| || | | || | |||||||| | CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTC-AA T--AGTGGCA GCATAAGTAT 744 AAGTCACAAA GGCAAGGAGA AAGAACACTA AACAAGTTGT CA 4672 |||||||| | ||||| |||| || | || ||| ||| || AAGTCACACA AAGAAGGAAG AAGAGAACAA AAGAAGATGT CA 786 hqPGS_C08HBa0235H18.1-_SGN-E210798- (8552 8503,5349 4672) ******************************************************************************** EST sequence 53 -strand 787 n (File: SGN-E340366-) 1 CAAGCCAATT ATATAACTCG ATTACTTCAA GCAATTTAAA AGAAAGTGAC TCAATTTTAC 61 TTAGCCTCTT CATCACTTGA GGGCATCTCC AAGGGGAAAT TTGGGCTAGT AACACCATTA 121 GGACAAAAAA CAACCCNTAT AATTTGTACT ACCACTAGGG CAAGTAAATG TGCTAGTAGG 181 ATCATCTTGT GGGTAGCTAT ACGCATCAGG ACATCTTTGT TTAAAAATCT CGACAAATCA 241 GTAGGGCCAC ATGGACCTTG TGTGCAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGA 301 TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGACATT CACCATTTAT ATTAGCCGTA 361 CAATGAATTG CATGGCATTT CCCTCCACTA GGATTGGTCG GGGCGAAAGT CATTGGAATA 421 TTAAATCCAT CGACTAAAGA AATGTCCCAG AAATCTAGGT TGCTAAACTG GTCCAAGGCG 481 TACTCGGCCA GGGTGTTTGG TGGTTTGCCC CACCCGGTAC ATTGCAAGAC CCCACCACAA 541 TCACCAGTCT GACATGAACC TCTACCAGCA CCATCAAAGT TGCAATTCGT ACGACCCCAT 601 ATACGTGCCA TCTTAGTGCC CCTCGGTGCA TTGATGACCC ATGTTTGGCC TCGATCAAGA 661 CGTCGACCAC CGCCTATTGG GGTCGACGCC GCCCAGACGG TGTATGGACA GTTGTTGCGT 721 ACCTCGAAAG TGGCAGCATA AGTGTAAGTC ACAAAAGCAA GAAGGAAGAA AACAAAAGAA 781 GATCTCA Predicted gene structure (within gDNA segment 9620 to 7): Exon 1 8541 8503 ( 39 n); cDNA 75 113 ( 39 n); score: 0.718 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0), Pa: 0.189 (s: 0.66) Exon 2 5349 4672 ( 678 n); cDNA 114 787 ( 674 n); score: 0.808 MATCH C08HBa0235H18.1- SGN-E340366- 0.808 717 0.911 C PGS_C08HBa0235H18.1-_SGN-E340366- (8541 8503,5349 4672) Alignment (genomic DNA sequence = upper lines): ACTTGTAGGC ATCTCCAATG GGAAATTTGT TGTTTCATTG TGAGTAGAGC CATAAGGACA 8482 ||||| ||| |||||||| | ||||||||| | | ACTTGAGGGC ATCTCCAAGG GGAAATTTGG GCTAGTAAC. .......... .......... 113 GAACATTATC TTGTAGTCTG TAGTCCAACT CTGACAAGTA AAAGTACTAG TTGGATCGTC 8422 .......... .......... .......... .......... .......... .......... 113 TTGAGGGTAA CTATAGGCAT CAGGACATCT TTGTTTGAAA AATCTTGACA ATTCAGTAGG 8362 .......... .......... .......... .......... .......... .......... 113 ACCACATGGA CCGTGATTAC AACAATATTG TTGTCCTCCG AATGTTGTAC AAGGGTTGTT 8302 .......... .......... .......... .......... .......... .......... 113 ACATCCTCCA GGTACCCTAA GTGAACCAGG GCATTCACCG TTTATATTGG CTGTGCATTG 8242 .......... .......... .......... .......... .......... .......... 113 AATTGGATGA CATTTTCCAG GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA 8182 .......... .......... .......... .......... .......... .......... 113 TCCATCAATA ACAGAAATAT CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC 8122 .......... .......... .......... .......... .......... .......... 113 AGCTAAGGTG TTTGGTGGTT TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC 8062 .......... .......... .......... .......... .......... .......... 113 AGTCTGGCAC CAACCTCTTC CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG 8002 .......... .......... .......... .......... .......... .......... 113 TGCCATTTTA GTGCCAGGTG GGGCCCAAAA CCACCAACTC TGACCTCTCT CGAGACGTCG 7942 .......... .......... .......... .......... .......... .......... 113 ACCACCTCCT ACGGGGACCG CTGCCGCCCA AACGGTGTAG GGGCAGTTGT TATGGACCTC 7882 .......... .......... .......... .......... .......... .......... 113 AAATACACCG GAACCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAAAACA CTAAACAAGT 7822 .......... .......... .......... .......... .......... .......... 113 TGTCAAGTGA CTCATTTTAG TATAAGAAGT TGTAGGATAT ATTTGCATAT CGAGCTAGGG 7762 .......... .......... .......... .......... .......... .......... 113 GTTTATATAG TGGTATGGCG GCTTTTTTTC ACTATGGACA TTAATCATAT AAATATTGGC 7702 .......... .......... .......... .......... .......... .......... 113 ACTTGTTATA AACATATATA GAAAATTAAA AAAAAAAATT GTATCCAAAA TATCTCCACT 7642 .......... .......... .......... .......... .......... .......... 113 TGAAAAAAAA AGCCGCCAAT ATAATATGAG TACAGCCTAT TATAAGTAAT ATATTTTGTT 7582 .......... .......... .......... .......... .......... .......... 113 CACTCCAGTC ATATTTCACA GTTCAACTTT TTGCTATTTT GAAAATTTAT GCATTAACAC 7522 .......... .......... .......... .......... .......... .......... 113 ATTATGATAT TTATAATGAT TAAAAAAAAA AGAGAAGATA TTTTTTAATT AAGTGATATA 7462 .......... .......... .......... .......... .......... .......... 113 TACGTATTAT TAGTTTTGTG TTTAACTATA TATTAATTTT AAATTATTTA GTTTAGTATA 7402 .......... .......... .......... .......... .......... .......... 113 TACAACAAAT CGGAAAAATG CATGGCAGGG CATGAAACCT AAAATTGTGG AAAATTTCCT 7342 .......... .......... .......... .......... .......... .......... 113 AATTTTTTTT GAACATTTTT TCATGAGAAA TTTAGTTAGT AGAGAATTCT CTTCATAATT 7282 .......... .......... .......... .......... .......... .......... 113 TTTATTGGTT ATGTTTTCAT AAATAAAATA ACTTAAAAAT TTTGAATTAC AAATTTGTAA 7222 .......... .......... .......... .......... .......... .......... 113 TTTTTGTTTA CAGACAATTG CCTTTTTTCC CTTGATTATT TTTTTCCGTC GTATATATAT 7162 .......... .......... .......... .......... .......... .......... 113 AGTGGATTTT TATATTAAAT TATTTATAGC ATATTTATCA AGTGGACATA ATAATTAATT 7102 .......... .......... .......... .......... .......... .......... 113 GAAAATGTGC ATGCATTCTA CAGTCAAAAA AGTTGAGCAA ATGGGTAGGC GTAGAGATGA 7042 .......... .......... .......... .......... .......... .......... 113 GTGGAACCTT AAAAGTTTGA ATTTTTTTTT TATTCGATAC AAGCTATGTA GGTCTTGTTT 6982 .......... .......... .......... .......... .......... .......... 113 CACACGAGAA AAATGAATTT TGAAATTAGT TATGAATTTC GTTACTAATC TATCTCTAAT 6922 .......... .......... .......... .......... .......... .......... 113 ATGCAAAGTT TTGAATAATC TATCCCTAAT TGGTTACTAG ATATAGAACT AGCAATGATT 6862 .......... .......... .......... .......... .......... .......... 113 TTTGTTATTG ATTGAATAAT TTGTTCGATA TTGATTTTTG TTTTATGTTT CCTCCGTCCG 6802 .......... .......... .......... .......... .......... .......... 113 ATATTGTTTG TTATGGTTTC TATTTATAGA CTCAAACTAT AAAAACTTTG ACTAACATTT 6742 .......... .......... .......... .......... .......... .......... 113 GAAGATACAT TTTTTTATCA TATTAATATG AAAAGATTGT AATTTATAGT ACTTTTCATA 6682 .......... .......... .......... .......... .......... .......... 113 TTGTTTTAGA ATATTTAATT TTTTTGGTTT AAAGTATCGA ATTAATGTGA TTTAATTTAC 6622 .......... .......... .......... .......... .......... .......... 113 CTTTAGAAAT CAATCAAAAT TGACTTTCGA TAAGCGTAAC ATGACAAATA TTTCTGGACG 6562 .......... .......... .......... .......... .......... .......... 113 GAGGGAGTAT TGATTTTTTA TCGTTGTCAT CATGGTCGTC TTTGTTTGTT GGTTCATAAT 6502 .......... .......... .......... .......... .......... .......... 113 AAGATATTCT TGAGTTTAAA TGAGATGATT GTATATTTGA GTTTAATTTT GGAACATGCA 6442 .......... .......... .......... .......... .......... .......... 113 AGAGTTTTTG GATTTGATTT TGATCGGTAG ATGTACTAGT ACCTGCCACC AAAACATCGT 6382 .......... .......... .......... .......... .......... .......... 113 GAAGGATTCA GTGAACGACT TGAAACTTAG TAACACAAGA CAATTCACTG AATGGTTGTT 6322 .......... .......... .......... .......... .......... .......... 113 GGCTCTACCG GAGGAGTCTG AAATCAACAA CGTGTAACTG CTTGGGCAGA ATAAAAGAAC 6262 .......... .......... .......... .......... .......... .......... 113 TTAAATTGTT TTAATAGAAT TTTTTAAGTA ACATTGCAAT TATTTAAGCA ATACGAACGC 6202 .......... .......... .......... .......... .......... .......... 113 CCAATTGTAT TTTATTTTAT TTTTTTATAA TAAAAGAGTT TTGGAAGTAA TGAATTTTAA 6142 .......... .......... .......... .......... .......... .......... 113 TACAATATCA ATATTTAAAT AATGTTGAAT TCTTAGCTTA GGCATTGAAT CGCAATTGAA 6082 .......... .......... .......... .......... .......... .......... 113 AGTGAAAGCC CTTTTTTGCT ATTTCAAGTT ATGAATTCAG ATACTAAAGG ATAACGTCTT 6022 .......... .......... .......... .......... .......... .......... 113 TTAGAAGGAA GATATTAATG GGGTAAGTGA TTTTTAAAAG TTGACTTTTA TATAAAATTA 5962 .......... .......... .......... .......... .......... .......... 113 TCTTCTTCTT TTTTCTTTTT CTTTTTTGTA TATCGACTCA TTTAATTATC AGTTTAACTT 5902 .......... .......... .......... .......... .......... .......... 113 AATGTTCGAA TCTTTAAGCT TTTTAATTAA TATTGAATTT ATTATTTCTT TAAACTTATA 5842 .......... .......... .......... .......... .......... .......... 113 AATTCAAATC TAAACACTTA TTAAAATTTT AATGAATTTT CATATACTAT AGTATACTTG 5782 .......... .......... .......... .......... .......... .......... 113 AAAATGTTCC AAAAGCCGCC AATAAAAAAA TATTTCCATC TGTTTGACTT ATATTATGAC 5722 .......... .......... .......... .......... .......... .......... 113 ATGTAACGAG TTGTCCCTAC AATTTTATAT TTTCAGATCT AGGTACTTTA ATATATTAAC 5662 .......... .......... .......... .......... .......... .......... 113 TAGACTAATT TTTTTTCATT ATAATTAAAA ATTTTAAGAA AAAAACTGTA CTCCAGATAT 5602 .......... .......... .......... .......... .......... .......... 113 AATTTCAATT TAAAATTAAA ATACCATATA TAAGACAAAG CATCGATCAT AGATTGTTAT 5542 .......... .......... .......... .......... .......... .......... 113 TCAGATCTTA GCCACTTCAA ACAAACAAAT GTAAAAGAAA TGTGTACAAG GCAAATTAAA 5482 .......... .......... .......... .......... .......... .......... 113 GACAATGTCC ATCTTCAAAA CAAATTTAAC AAAAAAGAGA TTGGCTCAAC TCAAGATTTC 5422 .......... .......... .......... .......... .......... .......... 113 TACTTAATTA AGCCACTTCA AGAGTATTTG TAGGAATCTC CAATGGGAAA TTTGTTGTTT 5362 .......... .......... .......... .......... .......... .......... 113 CATTGTGAGT AGAGCCATAA GGACAAAACA TAAC-CTTGT AGTCTGTAGT CCAACTCTGA 5303 | |||| | |||||||| | ||| | | | | | |||| | | ||| | .......... ..A-CCATTA GGACAAAAAA CAACCCNTAT AATTTGTACT ACCACTAGGG 160 CAAGTAAAAG TACTTGTTGG ATCGTCTTGA GGATAACTAT AGGCATCGGG ACATCTTTGT 5243 |||||||| | | || || || ||| ||||| || || |||| | ||||| || |||||||||| CAAGTAAATG TGCTAGTAGG ATCATCTTGT GGGTAGCTAT ACGCATCAGG ACATCTTTGT 220 TTGAAAAATC TTGACAAATC GGTAGGACCA CATGGACCTT GAGTGCAACA ATATTGTTGT 5183 || ||||||| | |||||||| ||||| ||| |||||||||| | |||||||| |||||||||| TT-AAAAATC TCGACAAATC AGTAGGGCCA CATGGACCTT GTGTGCAACA ATATTGTTGT 279 CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA CCCTAAGTGA ACCAGGGCAT 5123 |||||||| | | |||||||| ||||||||| |||||||||| |||||||||| |||||| ||| CCTCCGAACG TGGTACAAGG ATTGTTACAT CCTCCGGGTA CCCTAAGTGA ACCAGGACAT 339 TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT TTCCCGGCCC AGGGTTAGTT 5063 ||||| |||| ||||||| ||| |||||| | ||| |||| | || | ||| || || TCACCATTTA TATTAGCCGT ACAATGAATT GCATGGCATT TCCCTCCACT AGGATTGGTC 399 GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG AAATGTCCCA GAAATCTAAG 5003 ||| |||||| ||| || || || |||||| || | | || |||||||||| |||||||| | GGGGCGAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA GAAATCTAGG 459 TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG 4943 |||||||| | | | ||| || ||| || || | |||||||| ||||||| || ||| || | TTGCTAAACT GGTCCAAGGC GTACTCGGCC AGGGTGTTTG GTGGTTTGCC CCACCCGGTA 519 CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC CTCTACCAGC ACCATCAAAA 4883 |||| ||||| | |||||||| |||||| ||| || || ||| |||||||||| ||||||||| CATTGCAAGA CCCCACCACA ATCACCAGTC TGACATGAAC CTCTACCAGC ACCATCAAAG 579 TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC CCGGTGGAGC CCAAAACCAC 4823 |||||||| | |||||||||| ||||||||| || || |||| || || || | | TTGCAATTCG TACGACCCCA TATACGTGCC ATCTTAGTGC CCCTCGGTGC ATTGATGACC 639 CAACTTTGAC CTCTCTCGAG ACGTCGGCCA CCTCCTACGG GAGTCGCCGC TGCCCATACG 4763 || |||| | ||| || || |||||| ||| || |||| | | |||| ||| ||||| ||| CATGTTTGGC CTCGATCAAG ACGTCGACCA CCGCCTATTG GGGTCGACGC CGCCCAGACG 699 GTGTATGGAC AGTTGTTATG GACCTCAAAT ACACCGGAAG CATAAGTGTA AGTCACAAAG 4703 |||||||||| ||||||| | ||||| | | | || || |||||||||| ||||||||| GTGTATGGAC AGTTGTTGCG TACCTC-GA- A-AGTGGCAG CATAAGTGTA AGTCACAAAA 756 GCAAGGAGAA AGAACACTAA ACAAGTTGTC A 4672 ||||| || | |||| || || | ||| | || | GCAAGAAGGA AGAAAACAAA AGAAGATCTC A 787 hqPGS_C08HBa0235H18.1-_SGN-E340366- (8541 8503,5349 4672) ******************************************************************************** EST sequence 694 +strand 803 n (File: SGN-E540205+) 1 TTTTTTTTTT GTGATGATGT GACTTTTATT CATGTAATTA TATTAGGTTT ATTACAAGCC 61 AATTATATAA CTCGACTACT TCAAGCAATT TAAAAGAAAG TGACTCAATT TTACTTAGCC 121 TCTTCATCAC TTGAGGGCAT CTCCAAGGGG AAATTTGGGC TAGTAACACC ATTAGGACAA 181 AAAACAACCC TATAATTTGT ACTACCACTA GGGCAAGTAA ATGTGCTAGT AGGATCATCT 241 TGTGGGTAGC TATACGCATC AGGACATCTT TGTTTGAAAA ATCTCGACAA ATCAGTAGGG 301 CCACATGGAC CTTGTGTGCA ACAATATTGT TGTCCTCCGA ACGTGGTACA AGGATTGTTA 361 CATCCTCCGG GTACCCTAAG TGAACCAGGA CATTCACCAT TTATATTAGC CGTACAATGA 421 ATTGCATGGC ATTTCCCTCC ACTAGGATTG GTCGGGGCGA AAGTCATTGG AATATTAAAT 481 CCATCGACTA AAGAAATGTC CCAGAAATCT AGGTTGCTAA ACTGGTCCAA GGCGTACTCG 541 GCCAGGGTGT TTGGTGGTTT GCCCCACCCG GTACATTGCA AGACCCCACC ACAATCACCA 601 GTCTGACATG AACCTCTACC AGCACCATCA AAGTTGCAAT TCGTACGACC CCATATACGT 661 GCCATCTTAG TGCCCCTCGG TGCATTGATG ACCCATGTTT GGCCTCGATC AAGACGTCGA 721 CCACCGCCTA TTGNGGTCGA CGCCGCCCAG ACGGTGTATG GACAGTTGTT GCGTACCTCG 781 AAAGTGGCAG CATAAGTGTA AGT Predicted gene structure (within gDNA segment 10150 to 377): Exon 1 8541 8503 ( 39 n); cDNA 129 167 ( 39 n); score: 0.718 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0), Pa: 0.189 (s: 0.72) Exon 2 5349 4710 ( 640 n); cDNA 168 803 ( 636 n); score: 0.812 PPA cDNA 12 1 MATCH C08HBa0235H18.1- SGN-E540205+ 0.812 679 0.846 C PGS_C08HBa0235H18.1-_SGN-E540205+ (8541 8503,5349 4710) Alignment (genomic DNA sequence = upper lines): ACTTGTAGGC ATCTCCAATG GGAAATTTGT TGTTTCATTG TGAGTAGAGC CATAAGGACA 8482 ||||| ||| |||||||| | ||||||||| | | ACTTGAGGGC ATCTCCAAGG GGAAATTTGG GCTAGTAAC. .......... .......... 167 GAACATTATC TTGTAGTCTG TAGTCCAACT CTGACAAGTA AAAGTACTAG TTGGATCGTC 8422 .......... .......... .......... .......... .......... .......... 167 TTGAGGGTAA CTATAGGCAT CAGGACATCT TTGTTTGAAA AATCTTGACA ATTCAGTAGG 8362 .......... .......... .......... .......... .......... .......... 167 ACCACATGGA CCGTGATTAC AACAATATTG TTGTCCTCCG AATGTTGTAC AAGGGTTGTT 8302 .......... .......... .......... .......... .......... .......... 167 ACATCCTCCA GGTACCCTAA GTGAACCAGG GCATTCACCG TTTATATTGG CTGTGCATTG 8242 .......... .......... .......... .......... .......... .......... 167 AATTGGATGA CATTTTCCAG GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA 8182 .......... .......... .......... .......... .......... .......... 167 TCCATCAATA ACAGAAATAT CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC 8122 .......... .......... .......... .......... .......... .......... 167 AGCTAAGGTG TTTGGTGGTT TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC 8062 .......... .......... .......... .......... .......... .......... 167 AGTCTGGCAC CAACCTCTTC CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG 8002 .......... .......... .......... .......... .......... .......... 167 TGCCATTTTA GTGCCAGGTG GGGCCCAAAA CCACCAACTC TGACCTCTCT CGAGACGTCG 7942 .......... .......... .......... .......... .......... .......... 167 ACCACCTCCT ACGGGGACCG CTGCCGCCCA AACGGTGTAG GGGCAGTTGT TATGGACCTC 7882 .......... .......... .......... .......... .......... .......... 167 AAATACACCG GAACCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAAAACA CTAAACAAGT 7822 .......... .......... .......... .......... .......... .......... 167 TGTCAAGTGA CTCATTTTAG TATAAGAAGT TGTAGGATAT ATTTGCATAT CGAGCTAGGG 7762 .......... .......... .......... .......... .......... .......... 167 GTTTATATAG TGGTATGGCG GCTTTTTTTC ACTATGGACA TTAATCATAT AAATATTGGC 7702 .......... .......... .......... .......... .......... .......... 167 ACTTGTTATA AACATATATA GAAAATTAAA AAAAAAAATT GTATCCAAAA TATCTCCACT 7642 .......... .......... .......... .......... .......... .......... 167 TGAAAAAAAA AGCCGCCAAT ATAATATGAG TACAGCCTAT TATAAGTAAT ATATTTTGTT 7582 .......... .......... .......... .......... .......... .......... 167 CACTCCAGTC ATATTTCACA GTTCAACTTT TTGCTATTTT GAAAATTTAT GCATTAACAC 7522 .......... .......... .......... .......... .......... .......... 167 ATTATGATAT TTATAATGAT TAAAAAAAAA AGAGAAGATA TTTTTTAATT AAGTGATATA 7462 .......... .......... .......... .......... .......... .......... 167 TACGTATTAT TAGTTTTGTG TTTAACTATA TATTAATTTT AAATTATTTA GTTTAGTATA 7402 .......... .......... .......... .......... .......... .......... 167 TACAACAAAT CGGAAAAATG CATGGCAGGG CATGAAACCT AAAATTGTGG AAAATTTCCT 7342 .......... .......... .......... .......... .......... .......... 167 AATTTTTTTT GAACATTTTT TCATGAGAAA TTTAGTTAGT AGAGAATTCT CTTCATAATT 7282 .......... .......... .......... .......... .......... .......... 167 TTTATTGGTT ATGTTTTCAT AAATAAAATA ACTTAAAAAT TTTGAATTAC AAATTTGTAA 7222 .......... .......... .......... .......... .......... .......... 167 TTTTTGTTTA CAGACAATTG CCTTTTTTCC CTTGATTATT TTTTTCCGTC GTATATATAT 7162 .......... .......... .......... .......... .......... .......... 167 AGTGGATTTT TATATTAAAT TATTTATAGC ATATTTATCA AGTGGACATA ATAATTAATT 7102 .......... .......... .......... .......... .......... .......... 167 GAAAATGTGC ATGCATTCTA CAGTCAAAAA AGTTGAGCAA ATGGGTAGGC GTAGAGATGA 7042 .......... .......... .......... .......... .......... .......... 167 GTGGAACCTT AAAAGTTTGA ATTTTTTTTT TATTCGATAC AAGCTATGTA GGTCTTGTTT 6982 .......... .......... .......... .......... .......... .......... 167 CACACGAGAA AAATGAATTT TGAAATTAGT TATGAATTTC GTTACTAATC TATCTCTAAT 6922 .......... .......... .......... .......... .......... .......... 167 ATGCAAAGTT TTGAATAATC TATCCCTAAT TGGTTACTAG ATATAGAACT AGCAATGATT 6862 .......... .......... .......... .......... .......... .......... 167 TTTGTTATTG ATTGAATAAT TTGTTCGATA TTGATTTTTG TTTTATGTTT CCTCCGTCCG 6802 .......... .......... .......... .......... .......... .......... 167 ATATTGTTTG TTATGGTTTC TATTTATAGA CTCAAACTAT AAAAACTTTG ACTAACATTT 6742 .......... .......... .......... .......... .......... .......... 167 GAAGATACAT TTTTTTATCA TATTAATATG AAAAGATTGT AATTTATAGT ACTTTTCATA 6682 .......... .......... .......... .......... .......... .......... 167 TTGTTTTAGA ATATTTAATT TTTTTGGTTT AAAGTATCGA ATTAATGTGA TTTAATTTAC 6622 .......... .......... .......... .......... .......... .......... 167 CTTTAGAAAT CAATCAAAAT TGACTTTCGA TAAGCGTAAC ATGACAAATA TTTCTGGACG 6562 .......... .......... .......... .......... .......... .......... 167 GAGGGAGTAT TGATTTTTTA TCGTTGTCAT CATGGTCGTC TTTGTTTGTT GGTTCATAAT 6502 .......... .......... .......... .......... .......... .......... 167 AAGATATTCT TGAGTTTAAA TGAGATGATT GTATATTTGA GTTTAATTTT GGAACATGCA 6442 .......... .......... .......... .......... .......... .......... 167 AGAGTTTTTG GATTTGATTT TGATCGGTAG ATGTACTAGT ACCTGCCACC AAAACATCGT 6382 .......... .......... .......... .......... .......... .......... 167 GAAGGATTCA GTGAACGACT TGAAACTTAG TAACACAAGA CAATTCACTG AATGGTTGTT 6322 .......... .......... .......... .......... .......... .......... 167 GGCTCTACCG GAGGAGTCTG AAATCAACAA CGTGTAACTG CTTGGGCAGA ATAAAAGAAC 6262 .......... .......... .......... .......... .......... .......... 167 TTAAATTGTT TTAATAGAAT TTTTTAAGTA ACATTGCAAT TATTTAAGCA ATACGAACGC 6202 .......... .......... .......... .......... .......... .......... 167 CCAATTGTAT TTTATTTTAT TTTTTTATAA TAAAAGAGTT TTGGAAGTAA TGAATTTTAA 6142 .......... .......... .......... .......... .......... .......... 167 TACAATATCA ATATTTAAAT AATGTTGAAT TCTTAGCTTA GGCATTGAAT CGCAATTGAA 6082 .......... .......... .......... .......... .......... .......... 167 AGTGAAAGCC CTTTTTTGCT ATTTCAAGTT ATGAATTCAG ATACTAAAGG ATAACGTCTT 6022 .......... .......... .......... .......... .......... .......... 167 TTAGAAGGAA GATATTAATG GGGTAAGTGA TTTTTAAAAG TTGACTTTTA TATAAAATTA 5962 .......... .......... .......... .......... .......... .......... 167 TCTTCTTCTT TTTTCTTTTT CTTTTTTGTA TATCGACTCA TTTAATTATC AGTTTAACTT 5902 .......... .......... .......... .......... .......... .......... 167 AATGTTCGAA TCTTTAAGCT TTTTAATTAA TATTGAATTT ATTATTTCTT TAAACTTATA 5842 .......... .......... .......... .......... .......... .......... 167 AATTCAAATC TAAACACTTA TTAAAATTTT AATGAATTTT CATATACTAT AGTATACTTG 5782 .......... .......... .......... .......... .......... .......... 167 AAAATGTTCC AAAAGCCGCC AATAAAAAAA TATTTCCATC TGTTTGACTT ATATTATGAC 5722 .......... .......... .......... .......... .......... .......... 167 ATGTAACGAG TTGTCCCTAC AATTTTATAT TTTCAGATCT AGGTACTTTA ATATATTAAC 5662 .......... .......... .......... .......... .......... .......... 167 TAGACTAATT TTTTTTCATT ATAATTAAAA ATTTTAAGAA AAAAACTGTA CTCCAGATAT 5602 .......... .......... .......... .......... .......... .......... 167 AATTTCAATT TAAAATTAAA ATACCATATA TAAGACAAAG CATCGATCAT AGATTGTTAT 5542 .......... .......... .......... .......... .......... .......... 167 TCAGATCTTA GCCACTTCAA ACAAACAAAT GTAAAAGAAA TGTGTACAAG GCAAATTAAA 5482 .......... .......... .......... .......... .......... .......... 167 GACAATGTCC ATCTTCAAAA CAAATTTAAC AAAAAAGAGA TTGGCTCAAC TCAAGATTTC 5422 .......... .......... .......... .......... .......... .......... 167 TACTTAATTA AGCCACTTCA AGAGTATTTG TAGGAATCTC CAATGGGAAA TTTGTTGTTT 5362 .......... .......... .......... .......... .......... .......... 167 CATTGTGAGT AGAGCCATAA GGACAAAACA TAACCTTGTA GTCTGTAGTC CAACTCTGAC 5302 | |||| | |||||||| | |||| | || | |||| | | ||| | | .......... ..A-CCATTA GGACAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC 214 AAGTAAAAGT ACTTGTTGGA TCGTCTTGAG GATAACTATA GGCATCGGGA CATCTTTGTT 5242 ||||||| || || || ||| || ||||| | | || ||||| ||||| ||| |||||||||| AAGTAAATGT GCTAGTAGGA TCATCTTGTG GGTAGCTATA CGCATCAGGA CATCTTTGTT 274 TGAAAAATCT TGACAAATCG GTAGGACCAC ATGGACCTTG AGTGCAACAA TATTGTTGTC 5182 |||||||||| |||||||| ||||| |||| |||||||||| ||||||||| |||||||||| TGAAAAATCT CGACAAATCA GTAGGGCCAC ATGGACCTTG TGTGCAACAA TATTGTTGTC 334 CTCCGAATGT AGTACAAGGG TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGGCATT 5122 ||||||| || |||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CTCCGAACGT GGTACAAGGA TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGACATT 394 CACCGTTTAT ATTAGCAACA CATTGAATTG GATGACATTT TCCCGGCCCA GGGTTAGTTG 5062 |||| ||||| |||||| | || ||||||| ||| ||||| || | | || || || | CACCATTTAT ATTAGCCGTA CAATGAATTG CATGGCATTT CCCTCCACTA GGATTGGTCG 454 GGCCGAAAGA CATAGGGATG TTGAATCCAT CAATAACAGA AATGTCCCAG AAATCTAAGT 5002 || |||||| ||| || || || ||||||| | | | ||| |||||||||| ||||||| || GGGCGAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAG AAATCTAGGT 514 TGCTAAATTG ATTCAAAGCG TATTCAGCTA AGGTGTTTGG TGGTTTACCC CATCCTTTGC 4942 ||||||| || | ||| ||| || || || | ||||||||| |||||| ||| || || | | TGCTAAACTG GTCCAAGGCG TACTCGGCCA GGGTGTTTGG TGGTTTGCCC CACCCGGTAC 574 ATTCCAAGAC TCCACCACAA TCACCGGTCT GGCACCAACC TCTACCAGCA CCATCAAAAT 4882 ||| |||||| ||||||||| ||||| |||| | || |||| |||||||||| |||||||| | ATTGCAAGAC CCCACCACAA TCACCAGTCT GACATGAACC TCTACCAGCA CCATCAAAGT 634 TGCAATTAGT ACGACCCCAA ATACGTGCCA TTTTGGTGCC CGGTGGAGCC CAAAACCACC 4822 ||||||| || ||||||||| |||||||||| | || ||||| | || || | || TGCAATTCGT ACGACCCCAT ATACGTGCCA TCTTAGTGCC CCTCGGTGCA TTGATGACCC 694 AACTTTGACC TCTCTCGAGA CGTCGGCCAC CTCCTACGGG AGTCGCCGCT GCCCATACGG 4762 | |||| || || || ||| ||||| |||| | |||| | |||| ||| ||||| |||| ATGTTTGGCC TCGATCAAGA CGTCGACCAC CGCCTATTGN GGTCGACGCC GCCCAGACGG 754 TGTATGGACA GTTGTTATGG ACCTCAAATA CACCGGAAGC ATAAGTGTAA GT 4710 |||||||||| |||||| | ||||| | | | || ||| |||||||||| || TGTATGGACA GTTGTTGCGT ACCTC-GA-A -AGTGGCAGC ATAAGTGTAA GT 803 hqPGS_C08HBa0235H18.1-_SGN-E540205+ (8541 8503,5349 4710) ******************************************************************************** EST sequence 58 -strand 750 n (File: SGN-E263617-) 1 TTTCATTACG GTAGAGATCA GTTGACTAAT GNAGGCGATT TAAAATGAAG AAACTCAAAT 61 TCACTTGGCC ACTTCATCAG TACTTGCAGG CATCTCCAAG GGGAAATTTG GATCAGCAAC 121 ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT 181 TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA 241 CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT 301 ACAAGGGTTG TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT 361 GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT 421 TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC 481 CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC 541 ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG 601 ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG TTTGGCCTCG 661 ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT ATGGACAGTT 721 GTTGCGTACC TCAATAGTGG CAGCATAAGT Predicted gene structure (within gDNA segment 11662 to 3466): Exon 1 8552 8503 ( 50 n); cDNA 71 120 ( 50 n); score: 0.760 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0.76), Pa: 0.189 (s: 0.72) Exon 2 5349 4716 ( 634 n); cDNA 121 750 ( 630 n); score: 0.792 MATCH C08HBa0235H18.1- SGN-E263617- 0.789 684 0.912 C PGS_C08HBa0235H18.1-_SGN-E263617- (8552 8503,5349 4716) Alignment (genomic DNA sequence = upper lines): ACTTCAAGAG TACTTGTAGG CATCTCCAAT GGGAAATTTG TTGTTTCATT GTGAGTAGAG 8493 |||||| || |||||| ||| ||||||||| |||||||||| || ACTTCATCAG TACTTGCAGG CATCTCCAAG GGGAAATTTG GATCAGCAAC .......... 120 CCATAAGGAC AGAACATTAT CTTGTAGTCT GTAGTCCAAC TCTGACAAGT AAAAGTACTA 8433 .......... .......... .......... .......... .......... .......... 120 GTTGGATCGT CTTGAGGGTA ACTATAGGCA TCAGGACATC TTTGTTTGAA AAATCTTGAC 8373 .......... .......... .......... .......... .......... .......... 120 AATTCAGTAG GACCACATGG ACCGTGATTA CAACAATATT GTTGTCCTCC GAATGTTGTA 8313 .......... .......... .......... .......... .......... .......... 120 CAAGGGTTGT TACATCCTCC AGGTACCCTA AGTGAACCAG GGCATTCACC GTTTATATTG 8253 .......... .......... .......... .......... .......... .......... 120 GCTGTGCATT GAATTGGATG ACATTTTCCA GGGCCAGGCT TAGTTGGGCC AAAAGACATA 8193 .......... .......... .......... .......... .......... .......... 120 GGGATGTTGA ATCCATCAAT AACAGAAATA TCCCAAAAAT CTAGGTTACC AAACTGGTTC 8133 .......... .......... .......... .......... .......... .......... 120 AAAGCGTATT CAGCTAAGGT GTTTGGTGGT TTACCCCATC CTTTGCAATC CAGGACTCCA 8073 .......... .......... .......... .......... .......... .......... 120 CCACAATCAC CAGTCTGGCA CCAACCTCTT CCAGCACCAT CAAAGTTGCA ATTAGTACGA 8013 .......... .......... .......... .......... .......... .......... 120 CCCCAAATAC GTGCCATTTT AGTGCCAGGT GGGGCCCAAA ACCACCAACT CTGACCTCTC 7953 .......... .......... .......... .......... .......... .......... 120 TCGAGACGTC GACCACCTCC TACGGGGACC GCTGCCGCCC AAACGGTGTA GGGGCAGTTG 7893 .......... .......... .......... .......... .......... .......... 120 TTATGGACCT CAAATACACC GGAACCATAA GTGTAAGTCA CAAAGGCAAG GAGAAAAAAC 7833 .......... .......... .......... .......... .......... .......... 120 ACTAAACAAG TTGTCAAGTG ACTCATTTTA GTATAAGAAG TTGTAGGATA TATTTGCATA 7773 .......... .......... .......... .......... .......... .......... 120 TCGAGCTAGG GGTTTATATA GTGGTATGGC GGCTTTTTTT CACTATGGAC ATTAATCATA 7713 .......... .......... .......... .......... .......... .......... 120 TAAATATTGG CACTTGTTAT AAACATATAT AGAAAATTAA AAAAAAAAAT TGTATCCAAA 7653 .......... .......... .......... .......... .......... .......... 120 ATATCTCCAC TTGAAAAAAA AAGCCGCCAA TATAATATGA GTACAGCCTA TTATAAGTAA 7593 .......... .......... .......... .......... .......... .......... 120 TATATTTTGT TCACTCCAGT CATATTTCAC AGTTCAACTT TTTGCTATTT TGAAAATTTA 7533 .......... .......... .......... .......... .......... .......... 120 TGCATTAACA CATTATGATA TTTATAATGA TTAAAAAAAA AAGAGAAGAT ATTTTTTAAT 7473 .......... .......... .......... .......... .......... .......... 120 TAAGTGATAT ATACGTATTA TTAGTTTTGT GTTTAACTAT ATATTAATTT TAAATTATTT 7413 .......... .......... .......... .......... .......... .......... 120 AGTTTAGTAT ATACAACAAA TCGGAAAAAT GCATGGCAGG GCATGAAACC TAAAATTGTG 7353 .......... .......... .......... .......... .......... .......... 120 GAAAATTTCC TAATTTTTTT TGAACATTTT TTCATGAGAA ATTTAGTTAG TAGAGAATTC 7293 .......... .......... .......... .......... .......... .......... 120 TCTTCATAAT TTTTATTGGT TATGTTTTCA TAAATAAAAT AACTTAAAAA TTTTGAATTA 7233 .......... .......... .......... .......... .......... .......... 120 CAAATTTGTA ATTTTTGTTT ACAGACAATT GCCTTTTTTC CCTTGATTAT TTTTTTCCGT 7173 .......... .......... .......... .......... .......... .......... 120 CGTATATATA TAGTGGATTT TTATATTAAA TTATTTATAG CATATTTATC AAGTGGACAT 7113 .......... .......... .......... .......... .......... .......... 120 AATAATTAAT TGAAAATGTG CATGCATTCT ACAGTCAAAA AAGTTGAGCA AATGGGTAGG 7053 .......... .......... .......... .......... .......... .......... 120 CGTAGAGATG AGTGGAACCT TAAAAGTTTG AATTTTTTTT TTATTCGATA CAAGCTATGT 6993 .......... .......... .......... .......... .......... .......... 120 AGGTCTTGTT TCACACGAGA AAAATGAATT TTGAAATTAG TTATGAATTT CGTTACTAAT 6933 .......... .......... .......... .......... .......... .......... 120 CTATCTCTAA TATGCAAAGT TTTGAATAAT CTATCCCTAA TTGGTTACTA GATATAGAAC 6873 .......... .......... .......... .......... .......... .......... 120 TAGCAATGAT TTTTGTTATT GATTGAATAA TTTGTTCGAT ATTGATTTTT GTTTTATGTT 6813 .......... .......... .......... .......... .......... .......... 120 TCCTCCGTCC GATATTGTTT GTTATGGTTT CTATTTATAG ACTCAAACTA TAAAAACTTT 6753 .......... .......... .......... .......... .......... .......... 120 GACTAACATT TGAAGATACA TTTTTTTATC ATATTAATAT GAAAAGATTG TAATTTATAG 6693 .......... .......... .......... .......... .......... .......... 120 TACTTTTCAT ATTGTTTTAG AATATTTAAT TTTTTTGGTT TAAAGTATCG AATTAATGTG 6633 .......... .......... .......... .......... .......... .......... 120 ATTTAATTTA CCTTTAGAAA TCAATCAAAA TTGACTTTCG ATAAGCGTAA CATGACAAAT 6573 .......... .......... .......... .......... .......... .......... 120 ATTTCTGGAC GGAGGGAGTA TTGATTTTTT ATCGTTGTCA TCATGGTCGT CTTTGTTTGT 6513 .......... .......... .......... .......... .......... .......... 120 TGGTTCATAA TAAGATATTC TTGAGTTTAA ATGAGATGAT TGTATATTTG AGTTTAATTT 6453 .......... .......... .......... .......... .......... .......... 120 TGGAACATGC AAGAGTTTTT GGATTTGATT TTGATCGGTA GATGTACTAG TACCTGCCAC 6393 .......... .......... .......... .......... .......... .......... 120 CAAAACATCG TGAAGGATTC AGTGAACGAC TTGAAACTTA GTAACACAAG ACAATTCACT 6333 .......... .......... .......... .......... .......... .......... 120 GAATGGTTGT TGGCTCTACC GGAGGAGTCT GAAATCAACA ACGTGTAACT GCTTGGGCAG 6273 .......... .......... .......... .......... .......... .......... 120 AATAAAAGAA CTTAAATTGT TTTAATAGAA TTTTTTAAGT AACATTGCAA TTATTTAAGC 6213 .......... .......... .......... .......... .......... .......... 120 AATACGAACG CCCAATTGTA TTTTATTTTA TTTTTTTATA ATAAAAGAGT TTTGGAAGTA 6153 .......... .......... .......... .......... .......... .......... 120 ATGAATTTTA ATACAATATC AATATTTAAA TAATGTTGAA TTCTTAGCTT AGGCATTGAA 6093 .......... .......... .......... .......... .......... .......... 120 TCGCAATTGA AAGTGAAAGC CCTTTTTTGC TATTTCAAGT TATGAATTCA GATACTAAAG 6033 .......... .......... .......... .......... .......... .......... 120 GATAACGTCT TTTAGAAGGA AGATATTAAT GGGGTAAGTG ATTTTTAAAA GTTGACTTTT 5973 .......... .......... .......... .......... .......... .......... 120 ATATAAAATT ATCTTCTTCT TTTTTCTTTT TCTTTTTTGT ATATCGACTC ATTTAATTAT 5913 .......... .......... .......... .......... .......... .......... 120 CAGTTTAACT TAATGTTCGA ATCTTTAAGC TTTTTAATTA ATATTGAATT TATTATTTCT 5853 .......... .......... .......... .......... .......... .......... 120 TTAAACTTAT AAATTCAAAT CTAAACACTT ATTAAAATTT TAATGAATTT TCATATACTA 5793 .......... .......... .......... .......... .......... .......... 120 TAGTATACTT GAAAATGTTC CAAAAGCCGC CAATAAAAAA ATATTTCCAT CTGTTTGACT 5733 .......... .......... .......... .......... .......... .......... 120 TATATTATGA CATGTAACGA GTTGTCCCTA CAATTTTATA TTTTCAGATC TAGGTACTTT 5673 .......... .......... .......... .......... .......... .......... 120 AATATATTAA CTAGACTAAT TTTTTTTCAT TATAATTAAA AATTTTAAGA AAAAAACTGT 5613 .......... .......... .......... .......... .......... .......... 120 ACTCCAGATA TAATTTCAAT TTAAAATTAA AATACCATAT ATAAGACAAA GCATCGATCA 5553 .......... .......... .......... .......... .......... .......... 120 TAGATTGTTA TTCAGATCTT AGCCACTTCA AACAAACAAA TGTAAAAGAA ATGTGTACAA 5493 .......... .......... .......... .......... .......... .......... 120 GGCAAATTAA AGACAATGTC CATCTTCAAA ACAAATTTAA CAAAAAAGAG ATTGGCTCAA 5433 .......... .......... .......... .......... .......... .......... 120 CTCAAGATTT CTACTTAATT AAGCCACTTC AAGAGTATTT GTAGGAATCT CCAATGGGAA 5373 .......... .......... .......... .......... .......... .......... 120 ATTTGTTGTT TCATTGTGAG TAGAGCCATA AGGACAAAAC ATAACCTTGT AGTCTGTAGT 5313 | |||| ||||||||| | |||| | | ||| |||| | .......... .......... ...A-CCATT AGGACAAAAG ACAACCCTAT AGTTTGTACT 156 CCAACTCTGA CAAGTAAAAG TACTTGTTGG ATCGTCTTGA GGATAACTAT AGGCATCGGG 5253 | || | |||||||| | | ||||| || ||||||||| || || |||| | |||||||| ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG 216 ACATCTTTGT TTGAAAAATC TTGACAAATC GGTAGGACCA CATGGACCTT GAGTGCAACA 5193 |||||||| ||||||||| | ||||| || ||||| ||| |||||||||| | |||||||| ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA 276 ATATTGTTGT CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA CCCTAAGTGA 5133 |||||||||| ||||| || | | |||||||| |||||||||| ||||| |||| || |||| | ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC 336 ACCAGGGCAT TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT TTCCCGGCCC 5073 | ||| ||| ||||| |||| |||| || || |||||| | ||||||| |||| | GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT 396 AGGGTTAGTT GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG AAATGTCCCA 5013 ||| || ||| ||| | |||| ||| || || || |||||| || | | || |||||||||| AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA 456 GAAATCTAAG TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG GTGGTTTACC 4953 ||||||||| |||||||| | | | ||| || ||| || ||| | |||||||| | ||||| || AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC 516 CCATCCTTTG CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC CTCTACCAGC 4893 |||||| | || | |||| |||||||||| |||||| ||| || || || |||| || || CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC 576 ACCATCAAAA TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC CCGGTGGAGC 4833 | ||| ||| |||||| || |||||||||| ||||||||| || || || | || ||||| AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC 636 CCAAAACCAC CAACTTTGAC CTCTCTCGAG ACGTCGGCCA CCTCCTACGG GAGTCGCCGC 4773 | | || |||| | ||| | ||| |||||| ||| || |||| | |||||| || ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC 696 TGCCCATACG GTGTATGGAC AGTTGTTATG GACCTCAAAT ACACCGGAAG CATAAGT 4716 ||||| ||| |||||||||| ||||||| | ||||| ||| | || || ||||||| CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTC-AAT --AGTGGCAG CATAAGT 750 hqPGS_C08HBa0235H18.1-_SGN-E263617- (8552 8503,5349 4716) ******************************************************************************** EST sequence 160 -strand 753 n (File: SGN-E212205-) 1 TAAGATTTTC ATTACGGTAG AGATCAGTTG ACTAATTGAG GCGATTTAAA TGAAGAAACT 61 CAAATTCACT TGGCCACTTC ATCAGTACTT GCAGGCATCT CCAAGGGGAA ATTTGGATCA 121 GCAACACCAT TAGGACAAAA GACAACCCTA TAGTTTGTAC TACCACCANG GGCAAGTAAA 181 TGTGCTTGTA GGATCGTCTT GTGGGTAGCT ATAAGCATCG GGACATCTTT TCTTGAAAAA 241 TTTGGACAAC TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT GTCCTCCAAA 301 CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT 361 TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA 421 AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA 481 CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA 541 GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC 601 AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG 661 GCCTCGATTG AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG 721 ACAGTTGTTG CGTACCTCAA TAGTGGCAGC ATA Predicted gene structure (within gDNA segment 11722 to 3496): Exon 1 8552 8503 ( 50 n); cDNA 76 125 ( 50 n); score: 0.760 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0.76), Pa: 0.189 (s: 0.68) Exon 2 5349 4719 ( 631 n); cDNA 126 753 ( 628 n); score: 0.788 MATCH C08HBa0235H18.1- SGN-E212205- 0.786 681 0.904 C PGS_C08HBa0235H18.1-_SGN-E212205- (8552 8503,5349 4719) Alignment (genomic DNA sequence = upper lines): ACTTCAAGAG TACTTGTAGG CATCTCCAAT GGGAAATTTG TTGTTTCATT GTGAGTAGAG 8493 |||||| || |||||| ||| ||||||||| |||||||||| || ACTTCATCAG TACTTGCAGG CATCTCCAAG GGGAAATTTG GATCAGCAAC .......... 125 CCATAAGGAC AGAACATTAT CTTGTAGTCT GTAGTCCAAC TCTGACAAGT AAAAGTACTA 8433 .......... .......... .......... .......... .......... .......... 125 GTTGGATCGT CTTGAGGGTA ACTATAGGCA TCAGGACATC TTTGTTTGAA AAATCTTGAC 8373 .......... .......... .......... .......... .......... .......... 125 AATTCAGTAG GACCACATGG ACCGTGATTA CAACAATATT GTTGTCCTCC GAATGTTGTA 8313 .......... .......... .......... .......... .......... .......... 125 CAAGGGTTGT TACATCCTCC AGGTACCCTA AGTGAACCAG GGCATTCACC GTTTATATTG 8253 .......... .......... .......... .......... .......... .......... 125 GCTGTGCATT GAATTGGATG ACATTTTCCA GGGCCAGGCT TAGTTGGGCC AAAAGACATA 8193 .......... .......... .......... .......... .......... .......... 125 GGGATGTTGA ATCCATCAAT AACAGAAATA TCCCAAAAAT CTAGGTTACC AAACTGGTTC 8133 .......... .......... .......... .......... .......... .......... 125 AAAGCGTATT CAGCTAAGGT GTTTGGTGGT TTACCCCATC CTTTGCAATC CAGGACTCCA 8073 .......... .......... .......... .......... .......... .......... 125 CCACAATCAC CAGTCTGGCA CCAACCTCTT CCAGCACCAT CAAAGTTGCA ATTAGTACGA 8013 .......... .......... .......... .......... .......... .......... 125 CCCCAAATAC GTGCCATTTT AGTGCCAGGT GGGGCCCAAA ACCACCAACT CTGACCTCTC 7953 .......... .......... .......... .......... .......... .......... 125 TCGAGACGTC GACCACCTCC TACGGGGACC GCTGCCGCCC AAACGGTGTA GGGGCAGTTG 7893 .......... .......... .......... .......... .......... .......... 125 TTATGGACCT CAAATACACC GGAACCATAA GTGTAAGTCA CAAAGGCAAG GAGAAAAAAC 7833 .......... .......... .......... .......... .......... .......... 125 ACTAAACAAG TTGTCAAGTG ACTCATTTTA GTATAAGAAG TTGTAGGATA TATTTGCATA 7773 .......... .......... .......... .......... .......... .......... 125 TCGAGCTAGG GGTTTATATA GTGGTATGGC GGCTTTTTTT CACTATGGAC ATTAATCATA 7713 .......... .......... .......... .......... .......... .......... 125 TAAATATTGG CACTTGTTAT AAACATATAT AGAAAATTAA AAAAAAAAAT TGTATCCAAA 7653 .......... .......... .......... .......... .......... .......... 125 ATATCTCCAC TTGAAAAAAA AAGCCGCCAA TATAATATGA GTACAGCCTA TTATAAGTAA 7593 .......... .......... .......... .......... .......... .......... 125 TATATTTTGT TCACTCCAGT CATATTTCAC AGTTCAACTT TTTGCTATTT TGAAAATTTA 7533 .......... .......... .......... .......... .......... .......... 125 TGCATTAACA CATTATGATA TTTATAATGA TTAAAAAAAA AAGAGAAGAT ATTTTTTAAT 7473 .......... .......... .......... .......... .......... .......... 125 TAAGTGATAT ATACGTATTA TTAGTTTTGT GTTTAACTAT ATATTAATTT TAAATTATTT 7413 .......... .......... .......... .......... .......... .......... 125 AGTTTAGTAT ATACAACAAA TCGGAAAAAT GCATGGCAGG GCATGAAACC TAAAATTGTG 7353 .......... .......... .......... .......... .......... .......... 125 GAAAATTTCC TAATTTTTTT TGAACATTTT TTCATGAGAA ATTTAGTTAG TAGAGAATTC 7293 .......... .......... .......... .......... .......... .......... 125 TCTTCATAAT TTTTATTGGT TATGTTTTCA TAAATAAAAT AACTTAAAAA TTTTGAATTA 7233 .......... .......... .......... .......... .......... .......... 125 CAAATTTGTA ATTTTTGTTT ACAGACAATT GCCTTTTTTC CCTTGATTAT TTTTTTCCGT 7173 .......... .......... .......... .......... .......... .......... 125 CGTATATATA TAGTGGATTT TTATATTAAA TTATTTATAG CATATTTATC AAGTGGACAT 7113 .......... .......... .......... .......... .......... .......... 125 AATAATTAAT TGAAAATGTG CATGCATTCT ACAGTCAAAA AAGTTGAGCA AATGGGTAGG 7053 .......... .......... .......... .......... .......... .......... 125 CGTAGAGATG AGTGGAACCT TAAAAGTTTG AATTTTTTTT TTATTCGATA CAAGCTATGT 6993 .......... .......... .......... .......... .......... .......... 125 AGGTCTTGTT TCACACGAGA AAAATGAATT TTGAAATTAG TTATGAATTT CGTTACTAAT 6933 .......... .......... .......... .......... .......... .......... 125 CTATCTCTAA TATGCAAAGT TTTGAATAAT CTATCCCTAA TTGGTTACTA GATATAGAAC 6873 .......... .......... .......... .......... .......... .......... 125 TAGCAATGAT TTTTGTTATT GATTGAATAA TTTGTTCGAT ATTGATTTTT GTTTTATGTT 6813 .......... .......... .......... .......... .......... .......... 125 TCCTCCGTCC GATATTGTTT GTTATGGTTT CTATTTATAG ACTCAAACTA TAAAAACTTT 6753 .......... .......... .......... .......... .......... .......... 125 GACTAACATT TGAAGATACA TTTTTTTATC ATATTAATAT GAAAAGATTG TAATTTATAG 6693 .......... .......... .......... .......... .......... .......... 125 TACTTTTCAT ATTGTTTTAG AATATTTAAT TTTTTTGGTT TAAAGTATCG AATTAATGTG 6633 .......... .......... .......... .......... .......... .......... 125 ATTTAATTTA CCTTTAGAAA TCAATCAAAA TTGACTTTCG ATAAGCGTAA CATGACAAAT 6573 .......... .......... .......... .......... .......... .......... 125 ATTTCTGGAC GGAGGGAGTA TTGATTTTTT ATCGTTGTCA TCATGGTCGT CTTTGTTTGT 6513 .......... .......... .......... .......... .......... .......... 125 TGGTTCATAA TAAGATATTC TTGAGTTTAA ATGAGATGAT TGTATATTTG AGTTTAATTT 6453 .......... .......... .......... .......... .......... .......... 125 TGGAACATGC AAGAGTTTTT GGATTTGATT TTGATCGGTA GATGTACTAG TACCTGCCAC 6393 .......... .......... .......... .......... .......... .......... 125 CAAAACATCG TGAAGGATTC AGTGAACGAC TTGAAACTTA GTAACACAAG ACAATTCACT 6333 .......... .......... .......... .......... .......... .......... 125 GAATGGTTGT TGGCTCTACC GGAGGAGTCT GAAATCAACA ACGTGTAACT GCTTGGGCAG 6273 .......... .......... .......... .......... .......... .......... 125 AATAAAAGAA CTTAAATTGT TTTAATAGAA TTTTTTAAGT AACATTGCAA TTATTTAAGC 6213 .......... .......... .......... .......... .......... .......... 125 AATACGAACG CCCAATTGTA TTTTATTTTA TTTTTTTATA ATAAAAGAGT TTTGGAAGTA 6153 .......... .......... .......... .......... .......... .......... 125 ATGAATTTTA ATACAATATC AATATTTAAA TAATGTTGAA TTCTTAGCTT AGGCATTGAA 6093 .......... .......... .......... .......... .......... .......... 125 TCGCAATTGA AAGTGAAAGC CCTTTTTTGC TATTTCAAGT TATGAATTCA GATACTAAAG 6033 .......... .......... .......... .......... .......... .......... 125 GATAACGTCT TTTAGAAGGA AGATATTAAT GGGGTAAGTG ATTTTTAAAA GTTGACTTTT 5973 .......... .......... .......... .......... .......... .......... 125 ATATAAAATT ATCTTCTTCT TTTTTCTTTT TCTTTTTTGT ATATCGACTC ATTTAATTAT 5913 .......... .......... .......... .......... .......... .......... 125 CAGTTTAACT TAATGTTCGA ATCTTTAAGC TTTTTAATTA ATATTGAATT TATTATTTCT 5853 .......... .......... .......... .......... .......... .......... 125 TTAAACTTAT AAATTCAAAT CTAAACACTT ATTAAAATTT TAATGAATTT TCATATACTA 5793 .......... .......... .......... .......... .......... .......... 125 TAGTATACTT GAAAATGTTC CAAAAGCCGC CAATAAAAAA ATATTTCCAT CTGTTTGACT 5733 .......... .......... .......... .......... .......... .......... 125 TATATTATGA CATGTAACGA GTTGTCCCTA CAATTTTATA TTTTCAGATC TAGGTACTTT 5673 .......... .......... .......... .......... .......... .......... 125 AATATATTAA CTAGACTAAT TTTTTTTCAT TATAATTAAA AATTTTAAGA AAAAAACTGT 5613 .......... .......... .......... .......... .......... .......... 125 ACTCCAGATA TAATTTCAAT TTAAAATTAA AATACCATAT ATAAGACAAA GCATCGATCA 5553 .......... .......... .......... .......... .......... .......... 125 TAGATTGTTA TTCAGATCTT AGCCACTTCA AACAAACAAA TGTAAAAGAA ATGTGTACAA 5493 .......... .......... .......... .......... .......... .......... 125 GGCAAATTAA AGACAATGTC CATCTTCAAA ACAAATTTAA CAAAAAAGAG ATTGGCTCAA 5433 .......... .......... .......... .......... .......... .......... 125 CTCAAGATTT CTACTTAATT AAGCCACTTC AAGAGTATTT GTAGGAATCT CCAATGGGAA 5373 .......... .......... .......... .......... .......... .......... 125 ATTTGTTGTT TCATTGTGAG TAGAGCCATA AGGACAAAAC ATAACCTTGT AGTCTGTAGT 5313 | |||| ||||||||| | |||| | | ||| |||| | .......... .......... ...A-CCATT AGGACAAAAG ACAACCCTAT AGTTTGTACT 161 -CCAACTCTG ACAAGTAAAA GTACTTGTTG GATCGTCTTG AGGATAACTA TAGGCATCGG 5254 ||| | | |||||||| || ||||| | |||||||||| || || ||| || ||||||| ACCACCANGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA TAAGCATCGG 221 GACATCTTTG TTTGAAAAAT CTTGACAAAT CGGTAGGACC ACATGGACCT TGAGTGCAAC 5194 ||||||||| ||||||||| | ||||| | | ||||| || |||||||||| || ||||||| GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT TGGGTGCAAC 281 AATATTGTTG TCCTCCGAAT GTAGTACAAG GGTTGTTACA TCCTCCGGGT ACCCTAAGTG 5134 |||||||||| |||||| || || ||||||| |||||||||| |||||| ||| ||| |||| | AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACCTTAAGGG 341 AACCAGGGCA TTCACCGTTT ATATTAGCAA CACATTGAAT TGGATGACAT TTTCCCGGCC 5074 | ||| || |||||| ||| ||||| || || ||||| || |||||| ||||| | CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC 401 CAGGGTTAGT TGGGCCGAAA GACATAGGGA TGTTGAATCC ATCAATAACA GAAATGTCCC 5014 ||| || || |||| | ||| | ||| || | | || ||||| ||| | | | |||||||||| TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC 461 AGAAATCTAA GTTGCTAAAT TGATTCAAAG CGTATTCAGC TAAGGTGTTT GGTGGTTTAC 4954 | |||||||| ||||||||| || | ||| | |||| || || || ||||||| || ||||| | AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC 521 CCCATCCTTT GCATTCCAAG ACTCCACCAC AATCACCGGT CTGGCACCAA CCTCTACCAG 4894 ||||||| | || | ||| |||||||||| ||||||| || ||| || | ||||| || | CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG 581 CACCATCAAA ATTGCAATTA GTACGACCCC AAATACGTGC CATTTTGGTG CCCGGTGGAG 4834 || ||| ||| |||||| | |||||||||| | |||||||| ||| || || ||| |||| CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG 641 CCCAAAACCA CCAACTTTGA CCTCTCTCGA GACGTCGGCC ACCTCCTACG GGAGTCGCCG 4774 | | ||| |||| |||| | || ||||||| || ||| |||| ||||||| | CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC GGAGTCGATG 701 CTGCCCATAC GGTGTATGGA CAGTTGTTAT GGACCTCAAA TACACCGGAA GCATA 4719 | ||||| || |||||||||| |||||||| | ||||| || | | || | ||||| CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTC-AA T--AGTGGCA GCATA 753 hqPGS_C08HBa0235H18.1-_SGN-E212205- (8552 8503,5349 4719) ******************************************************************************** EST sequence 171 -strand 726 n (File: SGN-E213837-) 1 GGTAGAGATC AGTTGACTAA TGNAGGCGAT TTAAAATGAA GAAACTCAAA TTCACTTGGC 61 CACTTCATCA GTACTTGCAG GCATCTCCAA GGGGAAATTT GGATCAGCAA CACCATTAGG 121 ACAAAAGACA ACCNTATAGT TTGTACTACC ACCAGGGCAA GTAAATGTGC TTGTAGGATC 181 GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG AAAAATTTGG ACAACTCTGT 241 AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT CCAAACGTGG TACAAGGGTT 301 GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA 361 ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG GCAAAAGTCA TTGGAATATT 421 AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG CTAAACTGGT CCAAGGCGTA 481 CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC TGTAAGACTC CACCACAATC 541 ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG CAACCAGTAC GACCCCATAT 601 ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG 661 TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG TATGGACAGT TGTTGCGTAC 721 CTCAAT Predicted gene structure (within gDNA segment 11572 to 3616): Exon 1 8552 8503 ( 50 n); cDNA 62 111 ( 50 n); score: 0.760 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0.76), Pa: 0.189 (s: 0.72) Exon 2 5349 4735 ( 615 n); cDNA 112 725 ( 614 n); score: 0.795 MATCH C08HBa0235H18.1- SGN-E213837- 0.792 665 0.916 C PGS_C08HBa0235H18.1-_SGN-E213837- (8552 8503,5349 4735) Alignment (genomic DNA sequence = upper lines): ACTTCAAGAG TACTTGTAGG CATCTCCAAT GGGAAATTTG TTGTTTCATT GTGAGTAGAG 8493 |||||| || |||||| ||| ||||||||| |||||||||| || ACTTCATCAG TACTTGCAGG CATCTCCAAG GGGAAATTTG GATCAGCAAC .......... 111 CCATAAGGAC AGAACATTAT CTTGTAGTCT GTAGTCCAAC TCTGACAAGT AAAAGTACTA 8433 .......... .......... .......... .......... .......... .......... 111 GTTGGATCGT CTTGAGGGTA ACTATAGGCA TCAGGACATC TTTGTTTGAA AAATCTTGAC 8373 .......... .......... .......... .......... .......... .......... 111 AATTCAGTAG GACCACATGG ACCGTGATTA CAACAATATT GTTGTCCTCC GAATGTTGTA 8313 .......... .......... .......... .......... .......... .......... 111 CAAGGGTTGT TACATCCTCC AGGTACCCTA AGTGAACCAG GGCATTCACC GTTTATATTG 8253 .......... .......... .......... .......... .......... .......... 111 GCTGTGCATT GAATTGGATG ACATTTTCCA GGGCCAGGCT TAGTTGGGCC AAAAGACATA 8193 .......... .......... .......... .......... .......... .......... 111 GGGATGTTGA ATCCATCAAT AACAGAAATA TCCCAAAAAT CTAGGTTACC AAACTGGTTC 8133 .......... .......... .......... .......... .......... .......... 111 AAAGCGTATT CAGCTAAGGT GTTTGGTGGT TTACCCCATC CTTTGCAATC CAGGACTCCA 8073 .......... .......... .......... .......... .......... .......... 111 CCACAATCAC CAGTCTGGCA CCAACCTCTT CCAGCACCAT CAAAGTTGCA ATTAGTACGA 8013 .......... .......... .......... .......... .......... .......... 111 CCCCAAATAC GTGCCATTTT AGTGCCAGGT GGGGCCCAAA ACCACCAACT CTGACCTCTC 7953 .......... .......... .......... .......... .......... .......... 111 TCGAGACGTC GACCACCTCC TACGGGGACC GCTGCCGCCC AAACGGTGTA GGGGCAGTTG 7893 .......... .......... .......... .......... .......... .......... 111 TTATGGACCT CAAATACACC GGAACCATAA GTGTAAGTCA CAAAGGCAAG GAGAAAAAAC 7833 .......... .......... .......... .......... .......... .......... 111 ACTAAACAAG TTGTCAAGTG ACTCATTTTA GTATAAGAAG TTGTAGGATA TATTTGCATA 7773 .......... .......... .......... .......... .......... .......... 111 TCGAGCTAGG GGTTTATATA GTGGTATGGC GGCTTTTTTT CACTATGGAC ATTAATCATA 7713 .......... .......... .......... .......... .......... .......... 111 TAAATATTGG CACTTGTTAT AAACATATAT AGAAAATTAA AAAAAAAAAT TGTATCCAAA 7653 .......... .......... .......... .......... .......... .......... 111 ATATCTCCAC TTGAAAAAAA AAGCCGCCAA TATAATATGA GTACAGCCTA TTATAAGTAA 7593 .......... .......... .......... .......... .......... .......... 111 TATATTTTGT TCACTCCAGT CATATTTCAC AGTTCAACTT TTTGCTATTT TGAAAATTTA 7533 .......... .......... .......... .......... .......... .......... 111 TGCATTAACA CATTATGATA TTTATAATGA TTAAAAAAAA AAGAGAAGAT ATTTTTTAAT 7473 .......... .......... .......... .......... .......... .......... 111 TAAGTGATAT ATACGTATTA TTAGTTTTGT GTTTAACTAT ATATTAATTT TAAATTATTT 7413 .......... .......... .......... .......... .......... .......... 111 AGTTTAGTAT ATACAACAAA TCGGAAAAAT GCATGGCAGG GCATGAAACC TAAAATTGTG 7353 .......... .......... .......... .......... .......... .......... 111 GAAAATTTCC TAATTTTTTT TGAACATTTT TTCATGAGAA ATTTAGTTAG TAGAGAATTC 7293 .......... .......... .......... .......... .......... .......... 111 TCTTCATAAT TTTTATTGGT TATGTTTTCA TAAATAAAAT AACTTAAAAA TTTTGAATTA 7233 .......... .......... .......... .......... .......... .......... 111 CAAATTTGTA ATTTTTGTTT ACAGACAATT GCCTTTTTTC CCTTGATTAT TTTTTTCCGT 7173 .......... .......... .......... .......... .......... .......... 111 CGTATATATA TAGTGGATTT TTATATTAAA TTATTTATAG CATATTTATC AAGTGGACAT 7113 .......... .......... .......... .......... .......... .......... 111 AATAATTAAT TGAAAATGTG CATGCATTCT ACAGTCAAAA AAGTTGAGCA AATGGGTAGG 7053 .......... .......... .......... .......... .......... .......... 111 CGTAGAGATG AGTGGAACCT TAAAAGTTTG AATTTTTTTT TTATTCGATA CAAGCTATGT 6993 .......... .......... .......... .......... .......... .......... 111 AGGTCTTGTT TCACACGAGA AAAATGAATT TTGAAATTAG TTATGAATTT CGTTACTAAT 6933 .......... .......... .......... .......... .......... .......... 111 CTATCTCTAA TATGCAAAGT TTTGAATAAT CTATCCCTAA TTGGTTACTA GATATAGAAC 6873 .......... .......... .......... .......... .......... .......... 111 TAGCAATGAT TTTTGTTATT GATTGAATAA TTTGTTCGAT ATTGATTTTT GTTTTATGTT 6813 .......... .......... .......... .......... .......... .......... 111 TCCTCCGTCC GATATTGTTT GTTATGGTTT CTATTTATAG ACTCAAACTA TAAAAACTTT 6753 .......... .......... .......... .......... .......... .......... 111 GACTAACATT TGAAGATACA TTTTTTTATC ATATTAATAT GAAAAGATTG TAATTTATAG 6693 .......... .......... .......... .......... .......... .......... 111 TACTTTTCAT ATTGTTTTAG AATATTTAAT TTTTTTGGTT TAAAGTATCG AATTAATGTG 6633 .......... .......... .......... .......... .......... .......... 111 ATTTAATTTA CCTTTAGAAA TCAATCAAAA TTGACTTTCG ATAAGCGTAA CATGACAAAT 6573 .......... .......... .......... .......... .......... .......... 111 ATTTCTGGAC GGAGGGAGTA TTGATTTTTT ATCGTTGTCA TCATGGTCGT CTTTGTTTGT 6513 .......... .......... .......... .......... .......... .......... 111 TGGTTCATAA TAAGATATTC TTGAGTTTAA ATGAGATGAT TGTATATTTG AGTTTAATTT 6453 .......... .......... .......... .......... .......... .......... 111 TGGAACATGC AAGAGTTTTT GGATTTGATT TTGATCGGTA GATGTACTAG TACCTGCCAC 6393 .......... .......... .......... .......... .......... .......... 111 CAAAACATCG TGAAGGATTC AGTGAACGAC TTGAAACTTA GTAACACAAG ACAATTCACT 6333 .......... .......... .......... .......... .......... .......... 111 GAATGGTTGT TGGCTCTACC GGAGGAGTCT GAAATCAACA ACGTGTAACT GCTTGGGCAG 6273 .......... .......... .......... .......... .......... .......... 111 AATAAAAGAA CTTAAATTGT TTTAATAGAA TTTTTTAAGT AACATTGCAA TTATTTAAGC 6213 .......... .......... .......... .......... .......... .......... 111 AATACGAACG CCCAATTGTA TTTTATTTTA TTTTTTTATA ATAAAAGAGT TTTGGAAGTA 6153 .......... .......... .......... .......... .......... .......... 111 ATGAATTTTA ATACAATATC AATATTTAAA TAATGTTGAA TTCTTAGCTT AGGCATTGAA 6093 .......... .......... .......... .......... .......... .......... 111 TCGCAATTGA AAGTGAAAGC CCTTTTTTGC TATTTCAAGT TATGAATTCA GATACTAAAG 6033 .......... .......... .......... .......... .......... .......... 111 GATAACGTCT TTTAGAAGGA AGATATTAAT GGGGTAAGTG ATTTTTAAAA GTTGACTTTT 5973 .......... .......... .......... .......... .......... .......... 111 ATATAAAATT ATCTTCTTCT TTTTTCTTTT TCTTTTTTGT ATATCGACTC ATTTAATTAT 5913 .......... .......... .......... .......... .......... .......... 111 CAGTTTAACT TAATGTTCGA ATCTTTAAGC TTTTTAATTA ATATTGAATT TATTATTTCT 5853 .......... .......... .......... .......... .......... .......... 111 TTAAACTTAT AAATTCAAAT CTAAACACTT ATTAAAATTT TAATGAATTT TCATATACTA 5793 .......... .......... .......... .......... .......... .......... 111 TAGTATACTT GAAAATGTTC CAAAAGCCGC CAATAAAAAA ATATTTCCAT CTGTTTGACT 5733 .......... .......... .......... .......... .......... .......... 111 TATATTATGA CATGTAACGA GTTGTCCCTA CAATTTTATA TTTTCAGATC TAGGTACTTT 5673 .......... .......... .......... .......... .......... .......... 111 AATATATTAA CTAGACTAAT TTTTTTTCAT TATAATTAAA AATTTTAAGA AAAAAACTGT 5613 .......... .......... .......... .......... .......... .......... 111 ACTCCAGATA TAATTTCAAT TTAAAATTAA AATACCATAT ATAAGACAAA GCATCGATCA 5553 .......... .......... .......... .......... .......... .......... 111 TAGATTGTTA TTCAGATCTT AGCCACTTCA AACAAACAAA TGTAAAAGAA ATGTGTACAA 5493 .......... .......... .......... .......... .......... .......... 111 GGCAAATTAA AGACAATGTC CATCTTCAAA ACAAATTTAA CAAAAAAGAG ATTGGCTCAA 5433 .......... .......... .......... .......... .......... .......... 111 CTCAAGATTT CTACTTAATT AAGCCACTTC AAGAGTATTT GTAGGAATCT CCAATGGGAA 5373 .......... .......... .......... .......... .......... .......... 111 ATTTGTTGTT TCATTGTGAG TAGAGCCATA AGGACAAAAC ATAACCTTGT AGTCTGTAGT 5313 | |||| ||||||||| | |||| | | ||| |||| | .......... .......... ...A-CCATT AGGACAAAAG ACAACCNTAT AGTTTGTACT 147 CCAACTCTGA CAAGTAAAAG TACTTGTTGG ATCGTCTTGA GGATAACTAT AGGCATCGGG 5253 | || | |||||||| | | ||||| || ||||||||| || || |||| | |||||||| ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG 207 ACATCTTTGT TTGAAAAATC TTGACAAATC GGTAGGACCA CATGGACCTT GAGTGCAACA 5193 |||||||| ||||||||| | ||||| || ||||| ||| |||||||||| | |||||||| ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA 267 ATATTGTTGT CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA CCCTAAGTGA 5133 |||||||||| ||||| || | | |||||||| |||||||||| ||||| |||| || |||| | ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC 327 ACCAGGGCAT TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT TTCCCGGCCC 5073 | ||| ||| ||||| |||| |||| || || |||||| | ||||||| |||| | GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT 387 AGGGTTAGTT GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG AAATGTCCCA 5013 ||| || ||| ||| | |||| ||| || || || |||||| || | | || |||||||||| AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA 447 GAAATCTAAG TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG GTGGTTTACC 4953 ||||||||| |||||||| | | | ||| || ||| || ||| | |||||||| | ||||| || AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC 507 CCATCCTTTG CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC CTCTACCAGC 4893 |||||| | || | |||| |||||||||| |||||| ||| || || || |||| || || CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC 567 ACCATCAAAA TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC CCGGTGGAGC 4833 | ||| ||| |||||| || |||||||||| ||||||||| || || || | || ||||| AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC 627 CCAAAACCAC CAACTTTGAC CTCTCTCGAG ACGTCGGCCA CCTCCTACGG GAGTCGCCGC 4773 | | || |||| | ||| | ||| |||||| ||| || |||| | |||||| || ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC 687 TGCCCATACG GTGTATGGAC AGTTGTTATG GACCTCAA 4735 ||||| ||| |||||||||| ||||||| | ||||||| CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAA 725 hqPGS_C08HBa0235H18.1-_SGN-E213837- (8552 8503,5349 4735) ******************************************************************************** EST sequence 338 -strand 741 n (File: SGN-E355282-) 1 TTTTTTTNNT CGAAAACAAC ATATTTGTGA TGATGTGACT TTTATTCATG TAATTATATT 61 AGGTTTATTA CAAGCCAATT ATATAACTCG ACTACTTCAA GCAATTTAAA AGAAAGTGAC 121 TCAATTTTAC TTAGCCTCTT CATCACTTGA GGGCATCTCC AAGGGGAAAT TTGGGCTAGT 181 AACACCATTA GGACAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTAAATGT 241 GCTAGTAGGA TCATCTTGTG GGTAGCTATA CGCATCAGGA CATCTTTGTT TGAAAAATCT 301 CGACAAATCA GTAGGGCCAC ATGGACCTTG TGTGCAACAA TATTGTTGTC CTCCGAACGT 361 GGTACAAGGA TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGACATT CACCATTTAT 421 ATTAGCCGTA CAATGAATTG CATGGCATTT CCCTCCACTA GGATTGGTCG GGGCGAAAGT 481 CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAG AAATCTAGGT TGCTAAACTG 541 GTCCAAGGCG TACTCGGCCA GGGTGTTTGG TGGTTTGCCC CACCCGGTAC ATTGCAAGAC 601 CCCACCACAA TCACCAGTCT GACATGAACC TCTACCAGCA CCATCAAAGT TGCAATTCGT 661 ACGACCCCAT ATACGTGCCA TCTTAGTGCC CCTCGGTGCA TTGATGACCC ATGTTTGGCC 721 TCGATCAAGA CGTCGACCAC C Predicted gene structure (within gDNA segment 9720 to 1167): Exon 1 8541 8503 ( 39 n); cDNA 145 183 ( 39 n); score: 0.718 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0), Pa: 0.189 (s: 0.72) Exon 2 5349 4791 ( 559 n); cDNA 184 741 ( 558 n); score: 0.818 MATCH C08HBa0235H18.1- SGN-E355282- 0.818 598 0.807 C PGS_C08HBa0235H18.1-_SGN-E355282- (8541 8503,5349 4791) Alignment (genomic DNA sequence = upper lines): ACTTGTAGGC ATCTCCAATG GGAAATTTGT TGTTTCATTG TGAGTAGAGC CATAAGGACA 8482 ||||| ||| |||||||| | ||||||||| | | ACTTGAGGGC ATCTCCAAGG GGAAATTTGG GCTAGTAAC. .......... .......... 183 GAACATTATC TTGTAGTCTG TAGTCCAACT CTGACAAGTA AAAGTACTAG TTGGATCGTC 8422 .......... .......... .......... .......... .......... .......... 183 TTGAGGGTAA CTATAGGCAT CAGGACATCT TTGTTTGAAA AATCTTGACA ATTCAGTAGG 8362 .......... .......... .......... .......... .......... .......... 183 ACCACATGGA CCGTGATTAC AACAATATTG TTGTCCTCCG AATGTTGTAC AAGGGTTGTT 8302 .......... .......... .......... .......... .......... .......... 183 ACATCCTCCA GGTACCCTAA GTGAACCAGG GCATTCACCG TTTATATTGG CTGTGCATTG 8242 .......... .......... .......... .......... .......... .......... 183 AATTGGATGA CATTTTCCAG GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA 8182 .......... .......... .......... .......... .......... .......... 183 TCCATCAATA ACAGAAATAT CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC 8122 .......... .......... .......... .......... .......... .......... 183 AGCTAAGGTG TTTGGTGGTT TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC 8062 .......... .......... .......... .......... .......... .......... 183 AGTCTGGCAC CAACCTCTTC CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG 8002 .......... .......... .......... .......... .......... .......... 183 TGCCATTTTA GTGCCAGGTG GGGCCCAAAA CCACCAACTC TGACCTCTCT CGAGACGTCG 7942 .......... .......... .......... .......... .......... .......... 183 ACCACCTCCT ACGGGGACCG CTGCCGCCCA AACGGTGTAG GGGCAGTTGT TATGGACCTC 7882 .......... .......... .......... .......... .......... .......... 183 AAATACACCG GAACCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAAAACA CTAAACAAGT 7822 .......... .......... .......... .......... .......... .......... 183 TGTCAAGTGA CTCATTTTAG TATAAGAAGT TGTAGGATAT ATTTGCATAT CGAGCTAGGG 7762 .......... .......... .......... .......... .......... .......... 183 GTTTATATAG TGGTATGGCG GCTTTTTTTC ACTATGGACA TTAATCATAT AAATATTGGC 7702 .......... .......... .......... .......... .......... .......... 183 ACTTGTTATA AACATATATA GAAAATTAAA AAAAAAAATT GTATCCAAAA TATCTCCACT 7642 .......... .......... .......... .......... .......... .......... 183 TGAAAAAAAA AGCCGCCAAT ATAATATGAG TACAGCCTAT TATAAGTAAT ATATTTTGTT 7582 .......... .......... .......... .......... .......... .......... 183 CACTCCAGTC ATATTTCACA GTTCAACTTT TTGCTATTTT GAAAATTTAT GCATTAACAC 7522 .......... .......... .......... .......... .......... .......... 183 ATTATGATAT TTATAATGAT TAAAAAAAAA AGAGAAGATA TTTTTTAATT AAGTGATATA 7462 .......... .......... .......... .......... .......... .......... 183 TACGTATTAT TAGTTTTGTG TTTAACTATA TATTAATTTT AAATTATTTA GTTTAGTATA 7402 .......... .......... .......... .......... .......... .......... 183 TACAACAAAT CGGAAAAATG CATGGCAGGG CATGAAACCT AAAATTGTGG AAAATTTCCT 7342 .......... .......... .......... .......... .......... .......... 183 AATTTTTTTT GAACATTTTT TCATGAGAAA TTTAGTTAGT AGAGAATTCT CTTCATAATT 7282 .......... .......... .......... .......... .......... .......... 183 TTTATTGGTT ATGTTTTCAT AAATAAAATA ACTTAAAAAT TTTGAATTAC AAATTTGTAA 7222 .......... .......... .......... .......... .......... .......... 183 TTTTTGTTTA CAGACAATTG CCTTTTTTCC CTTGATTATT TTTTTCCGTC GTATATATAT 7162 .......... .......... .......... .......... .......... .......... 183 AGTGGATTTT TATATTAAAT TATTTATAGC ATATTTATCA AGTGGACATA ATAATTAATT 7102 .......... .......... .......... .......... .......... .......... 183 GAAAATGTGC ATGCATTCTA CAGTCAAAAA AGTTGAGCAA ATGGGTAGGC GTAGAGATGA 7042 .......... .......... .......... .......... .......... .......... 183 GTGGAACCTT AAAAGTTTGA ATTTTTTTTT TATTCGATAC AAGCTATGTA GGTCTTGTTT 6982 .......... .......... .......... .......... .......... .......... 183 CACACGAGAA AAATGAATTT TGAAATTAGT TATGAATTTC GTTACTAATC TATCTCTAAT 6922 .......... .......... .......... .......... .......... .......... 183 ATGCAAAGTT TTGAATAATC TATCCCTAAT TGGTTACTAG ATATAGAACT AGCAATGATT 6862 .......... .......... .......... .......... .......... .......... 183 TTTGTTATTG ATTGAATAAT TTGTTCGATA TTGATTTTTG TTTTATGTTT CCTCCGTCCG 6802 .......... .......... .......... .......... .......... .......... 183 ATATTGTTTG TTATGGTTTC TATTTATAGA CTCAAACTAT AAAAACTTTG ACTAACATTT 6742 .......... .......... .......... .......... .......... .......... 183 GAAGATACAT TTTTTTATCA TATTAATATG AAAAGATTGT AATTTATAGT ACTTTTCATA 6682 .......... .......... .......... .......... .......... .......... 183 TTGTTTTAGA ATATTTAATT TTTTTGGTTT AAAGTATCGA ATTAATGTGA TTTAATTTAC 6622 .......... .......... .......... .......... .......... .......... 183 CTTTAGAAAT CAATCAAAAT TGACTTTCGA TAAGCGTAAC ATGACAAATA TTTCTGGACG 6562 .......... .......... .......... .......... .......... .......... 183 GAGGGAGTAT TGATTTTTTA TCGTTGTCAT CATGGTCGTC TTTGTTTGTT GGTTCATAAT 6502 .......... .......... .......... .......... .......... .......... 183 AAGATATTCT TGAGTTTAAA TGAGATGATT GTATATTTGA GTTTAATTTT GGAACATGCA 6442 .......... .......... .......... .......... .......... .......... 183 AGAGTTTTTG GATTTGATTT TGATCGGTAG ATGTACTAGT ACCTGCCACC AAAACATCGT 6382 .......... .......... .......... .......... .......... .......... 183 GAAGGATTCA GTGAACGACT TGAAACTTAG TAACACAAGA CAATTCACTG AATGGTTGTT 6322 .......... .......... .......... .......... .......... .......... 183 GGCTCTACCG GAGGAGTCTG AAATCAACAA CGTGTAACTG CTTGGGCAGA ATAAAAGAAC 6262 .......... .......... .......... .......... .......... .......... 183 TTAAATTGTT TTAATAGAAT TTTTTAAGTA ACATTGCAAT TATTTAAGCA ATACGAACGC 6202 .......... .......... .......... .......... .......... .......... 183 CCAATTGTAT TTTATTTTAT TTTTTTATAA TAAAAGAGTT TTGGAAGTAA TGAATTTTAA 6142 .......... .......... .......... .......... .......... .......... 183 TACAATATCA ATATTTAAAT AATGTTGAAT TCTTAGCTTA GGCATTGAAT CGCAATTGAA 6082 .......... .......... .......... .......... .......... .......... 183 AGTGAAAGCC CTTTTTTGCT ATTTCAAGTT ATGAATTCAG ATACTAAAGG ATAACGTCTT 6022 .......... .......... .......... .......... .......... .......... 183 TTAGAAGGAA GATATTAATG GGGTAAGTGA TTTTTAAAAG TTGACTTTTA TATAAAATTA 5962 .......... .......... .......... .......... .......... .......... 183 TCTTCTTCTT TTTTCTTTTT CTTTTTTGTA TATCGACTCA TTTAATTATC AGTTTAACTT 5902 .......... .......... .......... .......... .......... .......... 183 AATGTTCGAA TCTTTAAGCT TTTTAATTAA TATTGAATTT ATTATTTCTT TAAACTTATA 5842 .......... .......... .......... .......... .......... .......... 183 AATTCAAATC TAAACACTTA TTAAAATTTT AATGAATTTT CATATACTAT AGTATACTTG 5782 .......... .......... .......... .......... .......... .......... 183 AAAATGTTCC AAAAGCCGCC AATAAAAAAA TATTTCCATC TGTTTGACTT ATATTATGAC 5722 .......... .......... .......... .......... .......... .......... 183 ATGTAACGAG TTGTCCCTAC AATTTTATAT TTTCAGATCT AGGTACTTTA ATATATTAAC 5662 .......... .......... .......... .......... .......... .......... 183 TAGACTAATT TTTTTTCATT ATAATTAAAA ATTTTAAGAA AAAAACTGTA CTCCAGATAT 5602 .......... .......... .......... .......... .......... .......... 183 AATTTCAATT TAAAATTAAA ATACCATATA TAAGACAAAG CATCGATCAT AGATTGTTAT 5542 .......... .......... .......... .......... .......... .......... 183 TCAGATCTTA GCCACTTCAA ACAAACAAAT GTAAAAGAAA TGTGTACAAG GCAAATTAAA 5482 .......... .......... .......... .......... .......... .......... 183 GACAATGTCC ATCTTCAAAA CAAATTTAAC AAAAAAGAGA TTGGCTCAAC TCAAGATTTC 5422 .......... .......... .......... .......... .......... .......... 183 TACTTAATTA AGCCACTTCA AGAGTATTTG TAGGAATCTC CAATGGGAAA TTTGTTGTTT 5362 .......... .......... .......... .......... .......... .......... 183 CATTGTGAGT AGAGCCATAA GGACAAAACA TAACCTTGTA GTCTGTAGTC CAACTCTGAC 5302 | |||| | |||||||| | |||| | || | |||| | | ||| | | .......... ..A-CCATTA GGACAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC 230 AAGTAAAAGT ACTTGTTGGA TCGTCTTGAG GATAACTATA GGCATCGGGA CATCTTTGTT 5242 ||||||| || || || ||| || ||||| | | || ||||| ||||| ||| |||||||||| AAGTAAATGT GCTAGTAGGA TCATCTTGTG GGTAGCTATA CGCATCAGGA CATCTTTGTT 290 TGAAAAATCT TGACAAATCG GTAGGACCAC ATGGACCTTG AGTGCAACAA TATTGTTGTC 5182 |||||||||| |||||||| ||||| |||| |||||||||| ||||||||| |||||||||| TGAAAAATCT CGACAAATCA GTAGGGCCAC ATGGACCTTG TGTGCAACAA TATTGTTGTC 350 CTCCGAATGT AGTACAAGGG TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGGCATT 5122 ||||||| || |||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CTCCGAACGT GGTACAAGGA TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGACATT 410 CACCGTTTAT ATTAGCAACA CATTGAATTG GATGACATTT TCCCGGCCCA GGGTTAGTTG 5062 |||| ||||| |||||| | || ||||||| ||| ||||| || | | || || || | CACCATTTAT ATTAGCCGTA CAATGAATTG CATGGCATTT CCCTCCACTA GGATTGGTCG 470 GGCCGAAAGA CATAGGGATG TTGAATCCAT CAATAACAGA AATGTCCCAG AAATCTAAGT 5002 || |||||| ||| || || || ||||||| | | | ||| |||||||||| ||||||| || GGGCGAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAG AAATCTAGGT 530 TGCTAAATTG ATTCAAAGCG TATTCAGCTA AGGTGTTTGG TGGTTTACCC CATCCTTTGC 4942 ||||||| || | ||| ||| || || || | ||||||||| |||||| ||| || || | | TGCTAAACTG GTCCAAGGCG TACTCGGCCA GGGTGTTTGG TGGTTTGCCC CACCCGGTAC 590 ATTCCAAGAC TCCACCACAA TCACCGGTCT GGCACCAACC TCTACCAGCA CCATCAAAAT 4882 ||| |||||| ||||||||| ||||| |||| | || |||| |||||||||| |||||||| | ATTGCAAGAC CCCACCACAA TCACCAGTCT GACATGAACC TCTACCAGCA CCATCAAAGT 650 TGCAATTAGT ACGACCCCAA ATACGTGCCA TTTTGGTGCC CGGTGGAGCC CAAAACCACC 4822 ||||||| || ||||||||| |||||||||| | || ||||| | || || | || TGCAATTCGT ACGACCCCAT ATACGTGCCA TCTTAGTGCC CCTCGGTGCA TTGATGACCC 710 AACTTTGACC TCTCTCGAGA CGTCGGCCAC C 4791 | |||| || || || ||| ||||| |||| | ATGTTTGGCC TCGATCAAGA CGTCGACCAC C 741 hqPGS_C08HBa0235H18.1-_SGN-E355282- (8541 8503,5349 4791) ******************************************************************************** EST sequence 222 -strand 697 n (File: SGN-E375347-) 1 ATAAAGTAAA AGTGAATATT TAAAAAACTG AGCTATTAAG ATTTTTCATT ACGGTAGAGA 61 TCAGTTGACT AATTGAGGCG ATTTAAAATG AAGAAACTCA AATTCACTTG GCCACTTCAT 121 CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTGGATCAGC AACACCATTA GGACAAAAGA 181 CAACCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA TCGTCTTGTG 241 GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT GTAGGGCCAC 301 ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC 361 CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG 421 CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT 481 CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA 541 GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT 601 GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA 661 TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTG Predicted gene structure (within gDNA segment 12092 to 3826): Exon 1 8555 8503 ( 53 n); cDNA 111 163 ( 53 n); score: 0.755 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0.76), Pa: 0.189 (s: 0.72) Exon 2 5349 4815 ( 535 n); cDNA 164 697 ( 534 n); score: 0.793 MATCH C08HBa0235H18.1- SGN-E375347- 0.789 588 0.844 C PGS_C08HBa0235H18.1-_SGN-E375347- (8555 8503,5349 4815) Alignment (genomic DNA sequence = upper lines): GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA 8496 || |||||| |||||||| |||||||||| || ||||||| ||| | | GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTGGATCAGC AAC....... 163 GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA 8436 .......... .......... .......... .......... .......... .......... 163 CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT GAAAAATCTT 8376 .......... .......... .......... .......... .......... .......... 163 GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC TCCGAATGTT 8316 .......... .......... .......... .......... .......... .......... 163 GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC ACCGTTTATA 8256 .......... .......... .......... .......... .......... .......... 163 TTGGCTGTGC ATTGAATTGG ATGACATTTT CCAGGGCCAG GCTTAGTTGG GCCAAAAGAC 8196 .......... .......... .......... .......... .......... .......... 163 ATAGGGATGT TGAATCCATC AATAACAGAA ATATCCCAAA AATCTAGGTT ACCAAACTGG 8136 .......... .......... .......... .......... .......... .......... 163 TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA ATCCAGGACT 8076 .......... .......... .......... .......... .......... .......... 163 CCACCACAAT CACCAGTCTG GCACCAACCT CTTCCAGCAC CATCAAAGTT GCAATTAGTA 8016 .......... .......... .......... .......... .......... .......... 163 CGACCCCAAA TACGTGCCAT TTTAGTGCCA GGTGGGGCCC AAAACCACCA ACTCTGACCT 7956 .......... .......... .......... .......... .......... .......... 163 CTCTCGAGAC GTCGACCACC TCCTACGGGG ACCGCTGCCG CCCAAACGGT GTAGGGGCAG 7896 .......... .......... .......... .......... .......... .......... 163 TTGTTATGGA CCTCAAATAC ACCGGAACCA TAAGTGTAAG TCACAAAGGC AAGGAGAAAA 7836 .......... .......... .......... .......... .......... .......... 163 AACACTAAAC AAGTTGTCAA GTGACTCATT TTAGTATAAG AAGTTGTAGG ATATATTTGC 7776 .......... .......... .......... .......... .......... .......... 163 ATATCGAGCT AGGGGTTTAT ATAGTGGTAT GGCGGCTTTT TTTCACTATG GACATTAATC 7716 .......... .......... .......... .......... .......... .......... 163 ATATAAATAT TGGCACTTGT TATAAACATA TATAGAAAAT TAAAAAAAAA AATTGTATCC 7656 .......... .......... .......... .......... .......... .......... 163 AAAATATCTC CACTTGAAAA AAAAAGCCGC CAATATAATA TGAGTACAGC CTATTATAAG 7596 .......... .......... .......... .......... .......... .......... 163 TAATATATTT TGTTCACTCC AGTCATATTT CACAGTTCAA CTTTTTGCTA TTTTGAAAAT 7536 .......... .......... .......... .......... .......... .......... 163 TTATGCATTA ACACATTATG ATATTTATAA TGATTAAAAA AAAAAGAGAA GATATTTTTT 7476 .......... .......... .......... .......... .......... .......... 163 AATTAAGTGA TATATACGTA TTATTAGTTT TGTGTTTAAC TATATATTAA TTTTAAATTA 7416 .......... .......... .......... .......... .......... .......... 163 TTTAGTTTAG TATATACAAC AAATCGGAAA AATGCATGGC AGGGCATGAA ACCTAAAATT 7356 .......... .......... .......... .......... .......... .......... 163 GTGGAAAATT TCCTAATTTT TTTTGAACAT TTTTTCATGA GAAATTTAGT TAGTAGAGAA 7296 .......... .......... .......... .......... .......... .......... 163 TTCTCTTCAT AATTTTTATT GGTTATGTTT TCATAAATAA AATAACTTAA AAATTTTGAA 7236 .......... .......... .......... .......... .......... .......... 163 TTACAAATTT GTAATTTTTG TTTACAGACA ATTGCCTTTT TTCCCTTGAT TATTTTTTTC 7176 .......... .......... .......... .......... .......... .......... 163 CGTCGTATAT ATATAGTGGA TTTTTATATT AAATTATTTA TAGCATATTT ATCAAGTGGA 7116 .......... .......... .......... .......... .......... .......... 163 CATAATAATT AATTGAAAAT GTGCATGCAT TCTACAGTCA AAAAAGTTGA GCAAATGGGT 7056 .......... .......... .......... .......... .......... .......... 163 AGGCGTAGAG ATGAGTGGAA CCTTAAAAGT TTGAATTTTT TTTTTATTCG ATACAAGCTA 6996 .......... .......... .......... .......... .......... .......... 163 TGTAGGTCTT GTTTCACACG AGAAAAATGA ATTTTGAAAT TAGTTATGAA TTTCGTTACT 6936 .......... .......... .......... .......... .......... .......... 163 AATCTATCTC TAATATGCAA AGTTTTGAAT AATCTATCCC TAATTGGTTA CTAGATATAG 6876 .......... .......... .......... .......... .......... .......... 163 AACTAGCAAT GATTTTTGTT ATTGATTGAA TAATTTGTTC GATATTGATT TTTGTTTTAT 6816 .......... .......... .......... .......... .......... .......... 163 GTTTCCTCCG TCCGATATTG TTTGTTATGG TTTCTATTTA TAGACTCAAA CTATAAAAAC 6756 .......... .......... .......... .......... .......... .......... 163 TTTGACTAAC ATTTGAAGAT ACATTTTTTT ATCATATTAA TATGAAAAGA TTGTAATTTA 6696 .......... .......... .......... .......... .......... .......... 163 TAGTACTTTT CATATTGTTT TAGAATATTT AATTTTTTTG GTTTAAAGTA TCGAATTAAT 6636 .......... .......... .......... .......... .......... .......... 163 GTGATTTAAT TTACCTTTAG AAATCAATCA AAATTGACTT TCGATAAGCG TAACATGACA 6576 .......... .......... .......... .......... .......... .......... 163 AATATTTCTG GACGGAGGGA GTATTGATTT TTTATCGTTG TCATCATGGT CGTCTTTGTT 6516 .......... .......... .......... .......... .......... .......... 163 TGTTGGTTCA TAATAAGATA TTCTTGAGTT TAAATGAGAT GATTGTATAT TTGAGTTTAA 6456 .......... .......... .......... .......... .......... .......... 163 TTTTGGAACA TGCAAGAGTT TTTGGATTTG ATTTTGATCG GTAGATGTAC TAGTACCTGC 6396 .......... .......... .......... .......... .......... .......... 163 CACCAAAACA TCGTGAAGGA TTCAGTGAAC GACTTGAAAC TTAGTAACAC AAGACAATTC 6336 .......... .......... .......... .......... .......... .......... 163 ACTGAATGGT TGTTGGCTCT ACCGGAGGAG TCTGAAATCA ACAACGTGTA ACTGCTTGGG 6276 .......... .......... .......... .......... .......... .......... 163 CAGAATAAAA GAACTTAAAT TGTTTTAATA GAATTTTTTA AGTAACATTG CAATTATTTA 6216 .......... .......... .......... .......... .......... .......... 163 AGCAATACGA ACGCCCAATT GTATTTTATT TTATTTTTTT ATAATAAAAG AGTTTTGGAA 6156 .......... .......... .......... .......... .......... .......... 163 GTAATGAATT TTAATACAAT ATCAATATTT AAATAATGTT GAATTCTTAG CTTAGGCATT 6096 .......... .......... .......... .......... .......... .......... 163 GAATCGCAAT TGAAAGTGAA AGCCCTTTTT TGCTATTTCA AGTTATGAAT TCAGATACTA 6036 .......... .......... .......... .......... .......... .......... 163 AAGGATAACG TCTTTTAGAA GGAAGATATT AATGGGGTAA GTGATTTTTA AAAGTTGACT 5976 .......... .......... .......... .......... .......... .......... 163 TTTATATAAA ATTATCTTCT TCTTTTTTCT TTTTCTTTTT TGTATATCGA CTCATTTAAT 5916 .......... .......... .......... .......... .......... .......... 163 TATCAGTTTA ACTTAATGTT CGAATCTTTA AGCTTTTTAA TTAATATTGA ATTTATTATT 5856 .......... .......... .......... .......... .......... .......... 163 TCTTTAAACT TATAAATTCA AATCTAAACA CTTATTAAAA TTTTAATGAA TTTTCATATA 5796 .......... .......... .......... .......... .......... .......... 163 CTATAGTATA CTTGAAAATG TTCCAAAAGC CGCCAATAAA AAAATATTTC CATCTGTTTG 5736 .......... .......... .......... .......... .......... .......... 163 ACTTATATTA TGACATGTAA CGAGTTGTCC CTACAATTTT ATATTTTCAG ATCTAGGTAC 5676 .......... .......... .......... .......... .......... .......... 163 TTTAATATAT TAACTAGACT AATTTTTTTT CATTATAATT AAAAATTTTA AGAAAAAAAC 5616 .......... .......... .......... .......... .......... .......... 163 TGTACTCCAG ATATAATTTC AATTTAAAAT TAAAATACCA TATATAAGAC AAAGCATCGA 5556 .......... .......... .......... .......... .......... .......... 163 TCATAGATTG TTATTCAGAT CTTAGCCACT TCAAACAAAC AAATGTAAAA GAAATGTGTA 5496 .......... .......... .......... .......... .......... .......... 163 CAAGGCAAAT TAAAGACAAT GTCCATCTTC AAAACAAATT TAACAAAAAA GAGATTGGCT 5436 .......... .......... .......... .......... .......... .......... 163 CAACTCAAGA TTTCTACTTA ATTAAGCCAC TTCAAGAGTA TTTGTAGGAA TCTCCAATGG 5376 .......... .......... .......... .......... .......... .......... 163 GAAATTTGTT GTTTCATTGT GAGTAGAGCC ATAAGGACAA AACATAACCT TGTAGTCTGT 5316 | || || ||||||| || | |||| | |||| ||| .......... .......... ......A-CC ATTAGGACAA AAGACAACCC TATAGTTTGT 196 AGTCCAACTC TGACAAGTAA AAGTACTTGT TGGATCGTCT TGAGGATAAC TATAGGCATC 5256 | | | || | ||||||| | || ||||| ||||||||| || || || | |||| ||||| ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC 256 GGGACATCTT TGTTTGAAAA ATCTTGACAA ATCGGTAGGA CCACATGGAC CTTGAGTGCA 5196 |||||||||| | ||||||| || | ||||| || ||||| |||||||||| |||| ||||| GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA 316 ACAATATTGT TGTCCTCCGA ATGTAGTACA AGGGTTGTTA CATCCTCCGG GTACCCTAAG 5136 |||||||||| |||||||| | | || ||||| |||||||||| |||||||| | ||||| |||| ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG 376 TGAACCAGGG CATTCACCGT TTATATTAGC AACACATTGA ATTGGATGAC ATTTTCCCGG 5076 | | ||| |||||||| | ||||||| || || ||| |||| |||| ||||||| GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC 436 CCCAGGGTTA GTTGGGCCGA AAGACATAGG GATGTTGAAT CCATCAATAA CAGAAATGTC 5016 | ||| || |||||| | | ||| ||| || || || ||| ||||| | | ||||||||| ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC 496 CCAGAAATCT AAGTTGCTAA ATTGATTCAA AGCGTATTCA GCTAAGGTGT TTGGTGGTTT 4956 ||| |||||| |||||||||| | || | ||| ||||| || |||| ||||| |||| ||||| CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT 556 ACCCCATCCT TTGCATTCCA AGACTCCACC ACAATCACCG GTCTGGCACC AACCTCTACC 4896 |||||||| | || | | |||||||||| ||||||||| ||||| || |||||| || GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC 616 AGCACCATCA AAATTGCAAT TAGTACGACC CCAAATACGT GCCATTTTGG TGCCCGGTGG 4836 ||| ||| | || |||||| ||||||||| ||| |||||| ||||| || | | ||| || TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG 676 AGCCCAAAAC CACCAACTTT G 4815 ||| | ||| ||| | AGCATTGATG ACCCATGTTT G 697 hqPGS_C08HBa0235H18.1-_SGN-E375347- (8555 8503,5349 4815) ******************************************************************************** EST sequence 229 -strand 672 n (File: SGN-E352685-) 1 ACTTTTATTC ATGTAATTAT ATTAGGTTTA TTACAAGCCA ATTATATAAC TCGACTACTT 61 CAAGCAATTT AAAAGAAAGT GACTCAATTT TACTTAGCCT CTTCATCACT TGAGGGCATC 121 TCCAAGGGGA AATTTGGGCT AGTAACACCA TTAGGACAAA AAACAACCCT ATAATTTGTA 181 CTACCACTAG GGCAAGTAAA TGTGCTAGTA GGATCATCTT GTGGGTAGCT ATACGCATCA 241 GGACATCTTT GTTTGAAAAA TCTCGACAAA TCAGTAGGGC CACATGGACC TTGTGTGCAA 301 CAATATTGTT GTCCTCCGAA CGTGGTACAA GGATTGTTAC ATCCTCCGGG TACCCTAAGT 361 GAACCAGGAC ATTCACCATT TATATTAGCC GTACAATGAA TTGCATGGCA TTTCCCTCCA 421 CTAGGATTGG TCGGGGCGAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC 481 CAGAAATCTA GGTTGCTAAA CTGGTCCAAG GCGTACTCGG CCAGGGTGTT TGGTGGTTTG 541 CCCCACCCGG TACATTGCAA GACCCCACCA CAATCACCAG TCTGACATGA ACCTCTACCA 601 GCACCATCAA AGTTGCAATT CGTACGACCC CATATACGTG CCATCTTAGT GCCCCTCGGT 661 GCATTGATGA CC Predicted gene structure (within gDNA segment 9350 to 1487): Exon 1 8541 8503 ( 39 n); cDNA 108 146 ( 39 n); score: 0.718 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0), Pa: 0.189 (s: 0.72) Exon 2 5349 4822 ( 528 n); cDNA 147 672 ( 526 n); score: 0.822 MATCH C08HBa0235H18.1- SGN-E352685- 0.822 567 0.844 C PGS_C08HBa0235H18.1-_SGN-E352685- (8541 8503,5349 4822) Alignment (genomic DNA sequence = upper lines): ACTTGTAGGC ATCTCCAATG GGAAATTTGT TGTTTCATTG TGAGTAGAGC CATAAGGACA 8482 ||||| ||| |||||||| | ||||||||| | | ACTTGAGGGC ATCTCCAAGG GGAAATTTGG GCTAGTAAC. .......... .......... 146 GAACATTATC TTGTAGTCTG TAGTCCAACT CTGACAAGTA AAAGTACTAG TTGGATCGTC 8422 .......... .......... .......... .......... .......... .......... 146 TTGAGGGTAA CTATAGGCAT CAGGACATCT TTGTTTGAAA AATCTTGACA ATTCAGTAGG 8362 .......... .......... .......... .......... .......... .......... 146 ACCACATGGA CCGTGATTAC AACAATATTG TTGTCCTCCG AATGTTGTAC AAGGGTTGTT 8302 .......... .......... .......... .......... .......... .......... 146 ACATCCTCCA GGTACCCTAA GTGAACCAGG GCATTCACCG TTTATATTGG CTGTGCATTG 8242 .......... .......... .......... .......... .......... .......... 146 AATTGGATGA CATTTTCCAG GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA 8182 .......... .......... .......... .......... .......... .......... 146 TCCATCAATA ACAGAAATAT CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC 8122 .......... .......... .......... .......... .......... .......... 146 AGCTAAGGTG TTTGGTGGTT TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC 8062 .......... .......... .......... .......... .......... .......... 146 AGTCTGGCAC CAACCTCTTC CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG 8002 .......... .......... .......... .......... .......... .......... 146 TGCCATTTTA GTGCCAGGTG GGGCCCAAAA CCACCAACTC TGACCTCTCT CGAGACGTCG 7942 .......... .......... .......... .......... .......... .......... 146 ACCACCTCCT ACGGGGACCG CTGCCGCCCA AACGGTGTAG GGGCAGTTGT TATGGACCTC 7882 .......... .......... .......... .......... .......... .......... 146 AAATACACCG GAACCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAAAACA CTAAACAAGT 7822 .......... .......... .......... .......... .......... .......... 146 TGTCAAGTGA CTCATTTTAG TATAAGAAGT TGTAGGATAT ATTTGCATAT CGAGCTAGGG 7762 .......... .......... .......... .......... .......... .......... 146 GTTTATATAG TGGTATGGCG GCTTTTTTTC ACTATGGACA TTAATCATAT AAATATTGGC 7702 .......... .......... .......... .......... .......... .......... 146 ACTTGTTATA AACATATATA GAAAATTAAA AAAAAAAATT GTATCCAAAA TATCTCCACT 7642 .......... .......... .......... .......... .......... .......... 146 TGAAAAAAAA AGCCGCCAAT ATAATATGAG TACAGCCTAT TATAAGTAAT ATATTTTGTT 7582 .......... .......... .......... .......... .......... .......... 146 CACTCCAGTC ATATTTCACA GTTCAACTTT TTGCTATTTT GAAAATTTAT GCATTAACAC 7522 .......... .......... .......... .......... .......... .......... 146 ATTATGATAT TTATAATGAT TAAAAAAAAA AGAGAAGATA TTTTTTAATT AAGTGATATA 7462 .......... .......... .......... .......... .......... .......... 146 TACGTATTAT TAGTTTTGTG TTTAACTATA TATTAATTTT AAATTATTTA GTTTAGTATA 7402 .......... .......... .......... .......... .......... .......... 146 TACAACAAAT CGGAAAAATG CATGGCAGGG CATGAAACCT AAAATTGTGG AAAATTTCCT 7342 .......... .......... .......... .......... .......... .......... 146 AATTTTTTTT GAACATTTTT TCATGAGAAA TTTAGTTAGT AGAGAATTCT CTTCATAATT 7282 .......... .......... .......... .......... .......... .......... 146 TTTATTGGTT ATGTTTTCAT AAATAAAATA ACTTAAAAAT TTTGAATTAC AAATTTGTAA 7222 .......... .......... .......... .......... .......... .......... 146 TTTTTGTTTA CAGACAATTG CCTTTTTTCC CTTGATTATT TTTTTCCGTC GTATATATAT 7162 .......... .......... .......... .......... .......... .......... 146 AGTGGATTTT TATATTAAAT TATTTATAGC ATATTTATCA AGTGGACATA ATAATTAATT 7102 .......... .......... .......... .......... .......... .......... 146 GAAAATGTGC ATGCATTCTA CAGTCAAAAA AGTTGAGCAA ATGGGTAGGC GTAGAGATGA 7042 .......... .......... .......... .......... .......... .......... 146 GTGGAACCTT AAAAGTTTGA ATTTTTTTTT TATTCGATAC AAGCTATGTA GGTCTTGTTT 6982 .......... .......... .......... .......... .......... .......... 146 CACACGAGAA AAATGAATTT TGAAATTAGT TATGAATTTC GTTACTAATC TATCTCTAAT 6922 .......... .......... .......... .......... .......... .......... 146 ATGCAAAGTT TTGAATAATC TATCCCTAAT TGGTTACTAG ATATAGAACT AGCAATGATT 6862 .......... .......... .......... .......... .......... .......... 146 TTTGTTATTG ATTGAATAAT TTGTTCGATA TTGATTTTTG TTTTATGTTT CCTCCGTCCG 6802 .......... .......... .......... .......... .......... .......... 146 ATATTGTTTG TTATGGTTTC TATTTATAGA CTCAAACTAT AAAAACTTTG ACTAACATTT 6742 .......... .......... .......... .......... .......... .......... 146 GAAGATACAT TTTTTTATCA TATTAATATG AAAAGATTGT AATTTATAGT ACTTTTCATA 6682 .......... .......... .......... .......... .......... .......... 146 TTGTTTTAGA ATATTTAATT TTTTTGGTTT AAAGTATCGA ATTAATGTGA TTTAATTTAC 6622 .......... .......... .......... .......... .......... .......... 146 CTTTAGAAAT CAATCAAAAT TGACTTTCGA TAAGCGTAAC ATGACAAATA TTTCTGGACG 6562 .......... .......... .......... .......... .......... .......... 146 GAGGGAGTAT TGATTTTTTA TCGTTGTCAT CATGGTCGTC TTTGTTTGTT GGTTCATAAT 6502 .......... .......... .......... .......... .......... .......... 146 AAGATATTCT TGAGTTTAAA TGAGATGATT GTATATTTGA GTTTAATTTT GGAACATGCA 6442 .......... .......... .......... .......... .......... .......... 146 AGAGTTTTTG GATTTGATTT TGATCGGTAG ATGTACTAGT ACCTGCCACC AAAACATCGT 6382 .......... .......... .......... .......... .......... .......... 146 GAAGGATTCA GTGAACGACT TGAAACTTAG TAACACAAGA CAATTCACTG AATGGTTGTT 6322 .......... .......... .......... .......... .......... .......... 146 GGCTCTACCG GAGGAGTCTG AAATCAACAA CGTGTAACTG CTTGGGCAGA ATAAAAGAAC 6262 .......... .......... .......... .......... .......... .......... 146 TTAAATTGTT TTAATAGAAT TTTTTAAGTA ACATTGCAAT TATTTAAGCA ATACGAACGC 6202 .......... .......... .......... .......... .......... .......... 146 CCAATTGTAT TTTATTTTAT TTTTTTATAA TAAAAGAGTT TTGGAAGTAA TGAATTTTAA 6142 .......... .......... .......... .......... .......... .......... 146 TACAATATCA ATATTTAAAT AATGTTGAAT TCTTAGCTTA GGCATTGAAT CGCAATTGAA 6082 .......... .......... .......... .......... .......... .......... 146 AGTGAAAGCC CTTTTTTGCT ATTTCAAGTT ATGAATTCAG ATACTAAAGG ATAACGTCTT 6022 .......... .......... .......... .......... .......... .......... 146 TTAGAAGGAA GATATTAATG GGGTAAGTGA TTTTTAAAAG TTGACTTTTA TATAAAATTA 5962 .......... .......... .......... .......... .......... .......... 146 TCTTCTTCTT TTTTCTTTTT CTTTTTTGTA TATCGACTCA TTTAATTATC AGTTTAACTT 5902 .......... .......... .......... .......... .......... .......... 146 AATGTTCGAA TCTTTAAGCT TTTTAATTAA TATTGAATTT ATTATTTCTT TAAACTTATA 5842 .......... .......... .......... .......... .......... .......... 146 AATTCAAATC TAAACACTTA TTAAAATTTT AATGAATTTT CATATACTAT AGTATACTTG 5782 .......... .......... .......... .......... .......... .......... 146 AAAATGTTCC AAAAGCCGCC AATAAAAAAA TATTTCCATC TGTTTGACTT ATATTATGAC 5722 .......... .......... .......... .......... .......... .......... 146 ATGTAACGAG TTGTCCCTAC AATTTTATAT TTTCAGATCT AGGTACTTTA ATATATTAAC 5662 .......... .......... .......... .......... .......... .......... 146 TAGACTAATT TTTTTTCATT ATAATTAAAA ATTTTAAGAA AAAAACTGTA CTCCAGATAT 5602 .......... .......... .......... .......... .......... .......... 146 AATTTCAATT TAAAATTAAA ATACCATATA TAAGACAAAG CATCGATCAT AGATTGTTAT 5542 .......... .......... .......... .......... .......... .......... 146 TCAGATCTTA GCCACTTCAA ACAAACAAAT GTAAAAGAAA TGTGTACAAG GCAAATTAAA 5482 .......... .......... .......... .......... .......... .......... 146 GACAATGTCC ATCTTCAAAA CAAATTTAAC AAAAAAGAGA TTGGCTCAAC TCAAGATTTC 5422 .......... .......... .......... .......... .......... .......... 146 TACTTAATTA AGCCACTTCA AGAGTATTTG TAGGAATCTC CAATGGGAAA TTTGTTGTTT 5362 .......... .......... .......... .......... .......... .......... 146 CATTGTGAGT AGAGCCATAA GGACAAAACA TAACCTTGTA GTCTGTAGTC CAACTCTGAC 5302 | |||| | |||||||| | |||| | || | |||| | | ||| | | .......... ..A-CCATTA GGACAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC 193 AAGTAAAAGT ACTTGTTGGA TCGTCTTGAG GATAACTATA GGCATCGGGA CATCTTTGTT 5242 ||||||| || || || ||| || ||||| | | || ||||| ||||| ||| |||||||||| AAGTAAATGT GCTAGTAGGA TCATCTTGTG GGTAGCTATA CGCATCAGGA CATCTTTGTT 253 TGAAAAATCT TGACAAATCG GTAGGACCAC ATGGACCTTG AGTGCAACAA TATTGTTGTC 5182 |||||||||| |||||||| ||||| |||| |||||||||| ||||||||| |||||||||| TGAAAAATCT CGACAAATCA GTAGGGCCAC ATGGACCTTG TGTGCAACAA TATTGTTGTC 313 CTCCGAATGT AGTACAAGGG TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGGCATT 5122 ||||||| || |||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CTCCGAACGT GGTACAAGGA TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGACATT 373 CACCGTTTAT ATTAGCAACA CATTGAATTG GATGACATTT TCCCGGCCCA GGGTTAGTTG 5062 |||| ||||| |||||| | || ||||||| ||| ||||| || | | || || || | CACCATTTAT ATTAGCCGTA CAATGAATTG CATGGCATTT CCCTCCACTA GGATTGGTCG 433 GGCCGAAAGA CATAGGGATG TTGAATCCAT CAATAACAGA AATGTCCCAG AAATCTAAGT 5002 || |||||| ||| || || || ||||||| | | | ||| |||||||||| ||||||| || GGGCGAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAG AAATCTAGGT 493 TGCTAAATTG ATTCAAAGCG TATTCAGCTA AGGTGTTTGG TGGTTTACCC CATCCTTTGC 4942 ||||||| || | ||| ||| || || || | ||||||||| |||||| ||| || || | | TGCTAAACTG GTCCAAGGCG TACTCGGCCA GGGTGTTTGG TGGTTTGCCC CACCCGGTAC 553 ATTCCAAGAC TCCACCACAA TCACCGGTCT GGCACCAACC TCTACCAGCA CCATCAAAAT 4882 ||| |||||| ||||||||| ||||| |||| | || |||| |||||||||| |||||||| | ATTGCAAGAC CCCACCACAA TCACCAGTCT GACATGAACC TCTACCAGCA CCATCAAAGT 613 TGCAATTAGT ACGACCCCAA ATACGTGCCA TTTTGGTGCC CGGTGGAGCC CAAAACCACC 4822 ||||||| || ||||||||| |||||||||| | || ||||| | || | | | ||| TGCAATTCGT ACGACCCCAT ATACGTGCCA TCTTAGTGCC CCTCGGTG-C ATTGATGACC 672 hqPGS_C08HBa0235H18.1-_SGN-E352685- (8541 8503,5349 4822) ******************************************************************************** EST sequence 145 -strand 654 n (File: SGN-E212616-) 1 AGCTATTAAG ATTTTCATTA CGGGTAGAGA TCAGTTGACT AATTGAGGCG ATTTAAAATG 61 AAGAAACTCA AATTCACTTG GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT 121 TGGATCAGCA ACACCATTAG GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA 181 AGTAAATGTG CTTGTAGGAT CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT 241 GAAAAATTTG GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC 301 TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC 361 ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG 421 GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT 481 GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG GGTTTGCCCC ATCCGGTACA 541 CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT CTGCCTGCAG CATTAAAGTT 601 GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC CTCGGAGCAT TGAT Predicted gene structure (within gDNA segment 11782 to 3946): Exon 1 8552 8503 ( 50 n); cDNA 84 132 ( 49 n); score: 0.760 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0.76), Pa: 0.189 (s: 0.72) Exon 2 5349 4833 ( 517 n); cDNA 133 648 ( 516 n); score: 0.805 MATCH C08HBa0235H18.1- SGN-E212616- 0.801 567 0.867 C PGS_C08HBa0235H18.1-_SGN-E212616- (8552 8503,5349 4833) Alignment (genomic DNA sequence = upper lines): ACTTCAAGAG TACTTGTAGG CATCTCCAAT GGGAAATTTG TTGTTTCATT GTGAGTAGAG 8493 |||||| || |||||| ||| ||||||||| |||||||| | | || ACTTCATCAG TACTTGCAGG CATCTCCAAG GGGAAATTGG AT-CAGCAAC .......... 132 CCATAAGGAC AGAACATTAT CTTGTAGTCT GTAGTCCAAC TCTGACAAGT AAAAGTACTA 8433 .......... .......... .......... .......... .......... .......... 132 GTTGGATCGT CTTGAGGGTA ACTATAGGCA TCAGGACATC TTTGTTTGAA AAATCTTGAC 8373 .......... .......... .......... .......... .......... .......... 132 AATTCAGTAG GACCACATGG ACCGTGATTA CAACAATATT GTTGTCCTCC GAATGTTGTA 8313 .......... .......... .......... .......... .......... .......... 132 CAAGGGTTGT TACATCCTCC AGGTACCCTA AGTGAACCAG GGCATTCACC GTTTATATTG 8253 .......... .......... .......... .......... .......... .......... 132 GCTGTGCATT GAATTGGATG ACATTTTCCA GGGCCAGGCT TAGTTGGGCC AAAAGACATA 8193 .......... .......... .......... .......... .......... .......... 132 GGGATGTTGA ATCCATCAAT AACAGAAATA TCCCAAAAAT CTAGGTTACC AAACTGGTTC 8133 .......... .......... .......... .......... .......... .......... 132 AAAGCGTATT CAGCTAAGGT GTTTGGTGGT TTACCCCATC CTTTGCAATC CAGGACTCCA 8073 .......... .......... .......... .......... .......... .......... 132 CCACAATCAC CAGTCTGGCA CCAACCTCTT CCAGCACCAT CAAAGTTGCA ATTAGTACGA 8013 .......... .......... .......... .......... .......... .......... 132 CCCCAAATAC GTGCCATTTT AGTGCCAGGT GGGGCCCAAA ACCACCAACT CTGACCTCTC 7953 .......... .......... .......... .......... .......... .......... 132 TCGAGACGTC GACCACCTCC TACGGGGACC GCTGCCGCCC AAACGGTGTA GGGGCAGTTG 7893 .......... .......... .......... .......... .......... .......... 132 TTATGGACCT CAAATACACC GGAACCATAA GTGTAAGTCA CAAAGGCAAG GAGAAAAAAC 7833 .......... .......... .......... .......... .......... .......... 132 ACTAAACAAG TTGTCAAGTG ACTCATTTTA GTATAAGAAG TTGTAGGATA TATTTGCATA 7773 .......... .......... .......... .......... .......... .......... 132 TCGAGCTAGG GGTTTATATA GTGGTATGGC GGCTTTTTTT CACTATGGAC ATTAATCATA 7713 .......... .......... .......... .......... .......... .......... 132 TAAATATTGG CACTTGTTAT AAACATATAT AGAAAATTAA AAAAAAAAAT TGTATCCAAA 7653 .......... .......... .......... .......... .......... .......... 132 ATATCTCCAC TTGAAAAAAA AAGCCGCCAA TATAATATGA GTACAGCCTA TTATAAGTAA 7593 .......... .......... .......... .......... .......... .......... 132 TATATTTTGT TCACTCCAGT CATATTTCAC AGTTCAACTT TTTGCTATTT TGAAAATTTA 7533 .......... .......... .......... .......... .......... .......... 132 TGCATTAACA CATTATGATA TTTATAATGA TTAAAAAAAA AAGAGAAGAT ATTTTTTAAT 7473 .......... .......... .......... .......... .......... .......... 132 TAAGTGATAT ATACGTATTA TTAGTTTTGT GTTTAACTAT ATATTAATTT TAAATTATTT 7413 .......... .......... .......... .......... .......... .......... 132 AGTTTAGTAT ATACAACAAA TCGGAAAAAT GCATGGCAGG GCATGAAACC TAAAATTGTG 7353 .......... .......... .......... .......... .......... .......... 132 GAAAATTTCC TAATTTTTTT TGAACATTTT TTCATGAGAA ATTTAGTTAG TAGAGAATTC 7293 .......... .......... .......... .......... .......... .......... 132 TCTTCATAAT TTTTATTGGT TATGTTTTCA TAAATAAAAT AACTTAAAAA TTTTGAATTA 7233 .......... .......... .......... .......... .......... .......... 132 CAAATTTGTA ATTTTTGTTT ACAGACAATT GCCTTTTTTC CCTTGATTAT TTTTTTCCGT 7173 .......... .......... .......... .......... .......... .......... 132 CGTATATATA TAGTGGATTT TTATATTAAA TTATTTATAG CATATTTATC AAGTGGACAT 7113 .......... .......... .......... .......... .......... .......... 132 AATAATTAAT TGAAAATGTG CATGCATTCT ACAGTCAAAA AAGTTGAGCA AATGGGTAGG 7053 .......... .......... .......... .......... .......... .......... 132 CGTAGAGATG AGTGGAACCT TAAAAGTTTG AATTTTTTTT TTATTCGATA CAAGCTATGT 6993 .......... .......... .......... .......... .......... .......... 132 AGGTCTTGTT TCACACGAGA AAAATGAATT TTGAAATTAG TTATGAATTT CGTTACTAAT 6933 .......... .......... .......... .......... .......... .......... 132 CTATCTCTAA TATGCAAAGT TTTGAATAAT CTATCCCTAA TTGGTTACTA GATATAGAAC 6873 .......... .......... .......... .......... .......... .......... 132 TAGCAATGAT TTTTGTTATT GATTGAATAA TTTGTTCGAT ATTGATTTTT GTTTTATGTT 6813 .......... .......... .......... .......... .......... .......... 132 TCCTCCGTCC GATATTGTTT GTTATGGTTT CTATTTATAG ACTCAAACTA TAAAAACTTT 6753 .......... .......... .......... .......... .......... .......... 132 GACTAACATT TGAAGATACA TTTTTTTATC ATATTAATAT GAAAAGATTG TAATTTATAG 6693 .......... .......... .......... .......... .......... .......... 132 TACTTTTCAT ATTGTTTTAG AATATTTAAT TTTTTTGGTT TAAAGTATCG AATTAATGTG 6633 .......... .......... .......... .......... .......... .......... 132 ATTTAATTTA CCTTTAGAAA TCAATCAAAA TTGACTTTCG ATAAGCGTAA CATGACAAAT 6573 .......... .......... .......... .......... .......... .......... 132 ATTTCTGGAC GGAGGGAGTA TTGATTTTTT ATCGTTGTCA TCATGGTCGT CTTTGTTTGT 6513 .......... .......... .......... .......... .......... .......... 132 TGGTTCATAA TAAGATATTC TTGAGTTTAA ATGAGATGAT TGTATATTTG AGTTTAATTT 6453 .......... .......... .......... .......... .......... .......... 132 TGGAACATGC AAGAGTTTTT GGATTTGATT TTGATCGGTA GATGTACTAG TACCTGCCAC 6393 .......... .......... .......... .......... .......... .......... 132 CAAAACATCG TGAAGGATTC AGTGAACGAC TTGAAACTTA GTAACACAAG ACAATTCACT 6333 .......... .......... .......... .......... .......... .......... 132 GAATGGTTGT TGGCTCTACC GGAGGAGTCT GAAATCAACA ACGTGTAACT GCTTGGGCAG 6273 .......... .......... .......... .......... .......... .......... 132 AATAAAAGAA CTTAAATTGT TTTAATAGAA TTTTTTAAGT AACATTGCAA TTATTTAAGC 6213 .......... .......... .......... .......... .......... .......... 132 AATACGAACG CCCAATTGTA TTTTATTTTA TTTTTTTATA ATAAAAGAGT TTTGGAAGTA 6153 .......... .......... .......... .......... .......... .......... 132 ATGAATTTTA ATACAATATC AATATTTAAA TAATGTTGAA TTCTTAGCTT AGGCATTGAA 6093 .......... .......... .......... .......... .......... .......... 132 TCGCAATTGA AAGTGAAAGC CCTTTTTTGC TATTTCAAGT TATGAATTCA GATACTAAAG 6033 .......... .......... .......... .......... .......... .......... 132 GATAACGTCT TTTAGAAGGA AGATATTAAT GGGGTAAGTG ATTTTTAAAA GTTGACTTTT 5973 .......... .......... .......... .......... .......... .......... 132 ATATAAAATT ATCTTCTTCT TTTTTCTTTT TCTTTTTTGT ATATCGACTC ATTTAATTAT 5913 .......... .......... .......... .......... .......... .......... 132 CAGTTTAACT TAATGTTCGA ATCTTTAAGC TTTTTAATTA ATATTGAATT TATTATTTCT 5853 .......... .......... .......... .......... .......... .......... 132 TTAAACTTAT AAATTCAAAT CTAAACACTT ATTAAAATTT TAATGAATTT TCATATACTA 5793 .......... .......... .......... .......... .......... .......... 132 TAGTATACTT GAAAATGTTC CAAAAGCCGC CAATAAAAAA ATATTTCCAT CTGTTTGACT 5733 .......... .......... .......... .......... .......... .......... 132 TATATTATGA CATGTAACGA GTTGTCCCTA CAATTTTATA TTTTCAGATC TAGGTACTTT 5673 .......... .......... .......... .......... .......... .......... 132 AATATATTAA CTAGACTAAT TTTTTTTCAT TATAATTAAA AATTTTAAGA AAAAAACTGT 5613 .......... .......... .......... .......... .......... .......... 132 ACTCCAGATA TAATTTCAAT TTAAAATTAA AATACCATAT ATAAGACAAA GCATCGATCA 5553 .......... .......... .......... .......... .......... .......... 132 TAGATTGTTA TTCAGATCTT AGCCACTTCA AACAAACAAA TGTAAAAGAA ATGTGTACAA 5493 .......... .......... .......... .......... .......... .......... 132 GGCAAATTAA AGACAATGTC CATCTTCAAA ACAAATTTAA CAAAAAAGAG ATTGGCTCAA 5433 .......... .......... .......... .......... .......... .......... 132 CTCAAGATTT CTACTTAATT AAGCCACTTC AAGAGTATTT GTAGGAATCT CCAATGGGAA 5373 .......... .......... .......... .......... .......... .......... 132 ATTTGTTGTT TCATTGTGAG TAGAGCCATA AGGACAAAAC ATAACCTTGT AGTCTGTAGT 5313 | |||| ||||||||| | |||| | | ||| |||| | .......... .......... ...A-CCATT AGGACAAAAG ACAACCCTAT AGTTTGTACT 168 CCAACTCTGA CAAGTAAAAG TACTTGTTGG ATCGTCTTGA GGATAACTAT AGGCATCGGG 5253 | || | |||||||| | | ||||| || ||||||||| || || |||| | |||||||| ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG 228 ACATCTTTGT TTGAAAAATC TTGACAAATC GGTAGGACCA CATGGACCTT GAGTGCAACA 5193 |||||||| ||||||||| | ||||| || ||||| ||| |||||||||| | |||||||| ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA 288 ATATTGTTGT CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA CCCTAAGTGA 5133 |||||||||| ||||| || | | |||||||| |||||||||| ||||| |||| || |||| | ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC 348 ACCAGGGCAT TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT TTCCCGGCCC 5073 | ||| ||| ||||| |||| |||| || || |||||| | ||||||| |||| | GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT 408 AGGGTTAGTT GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG AAATGTCCCA 5013 ||| || ||| ||| | |||| ||| || || || |||||| || | | || |||||||||| AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA 468 GAAATCTAAG TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG GTGGTTTACC 4953 ||||||||| |||||||| | | | ||| || ||| || ||| | |||||||| | ||||| || AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC 528 CCATCCTTTG CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC CTCTACCAGC 4893 |||||| | || | |||| |||||||||| |||||| ||| || || || |||| || || CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC 588 ACCATCAAAA TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC CCGGTGGAGC 4833 | ||| ||| |||||| || |||||||||| ||||||||| || || || | || ||||| AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC 648 hqPGS_C08HBa0235H18.1-_SGN-E212616- (8552 8503,5349 4833) ******************************************************************************** EST sequence 32 -strand 730 n (File: SGN-E210719-) 1 TTTTTTGAGA TGTAACTCTT ATTCCGGTCT TTAAGTTTGC TACGAACTCT TATCAATAAA 61 GTAAAAGTGA ATATTTAAAA AACTGAGCTA TTAAGATCTT TCATTACGGT AGAGATCAGT 121 TGACTAATTG AGGCGATTTA AAATGAAGAA ACTCAAATTC ACTTGGCCAC TTCATCAGTA 181 CTTGCAGGCA TCTCCAAGGG GAAATTTGGA TCAGCAACAC CATTAGGACA AAAGACAACC 241 CTATAGTTTG TACTACCACC AGGGCAAGTA AATGTGCTTG TAGGATCGTC TTGTGGGTAG 301 CTATAAGCAT CGGGACATCT TTTCTTGAAA AATTTGGACA ACTCTGTAGG GCCACATGGA 361 CCTTGGGTGC AACAATATTG TTGTCCTCCA AACGTGGTAC AAGGGTTGTT ACATCCTCCA 421 GGTACCTTAA GGGCGCGAGG ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA 481 CATTTTCCTC CACTAGGTTT TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT 541 AAAGAAATGT CCCAAAAATC TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG 601 TTTGGGGGTT TGCCCCATCC GGTACACTGT AAGACTCCAC CACAATCACC AGTATGACAT 661 GTACCTCTGC CTGCAGCATT AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA 721 GTTCCCCTCG Predicted gene structure (within gDNA segment 12642 to 4646): Exon 1 8555 8503 ( 53 n); cDNA 166 218 ( 53 n); score: 0.755 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0.76), Pa: 0.189 (s: 0.72) Exon 2 5349 4841 ( 509 n); cDNA 219 726 ( 508 n); score: 0.806 MATCH C08HBa0235H18.1- SGN-E210719- 0.801 562 0.770 C PGS_C08HBa0235H18.1-_SGN-E210719- (8555 8503,5349 4841) Alignment (genomic DNA sequence = upper lines): GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA 8496 || |||||| |||||||| |||||||||| || ||||||| ||| | | GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTGGATCAGC AAC....... 218 GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA 8436 .......... .......... .......... .......... .......... .......... 218 CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT GAAAAATCTT 8376 .......... .......... .......... .......... .......... .......... 218 GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC TCCGAATGTT 8316 .......... .......... .......... .......... .......... .......... 218 GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC ACCGTTTATA 8256 .......... .......... .......... .......... .......... .......... 218 TTGGCTGTGC ATTGAATTGG ATGACATTTT CCAGGGCCAG GCTTAGTTGG GCCAAAAGAC 8196 .......... .......... .......... .......... .......... .......... 218 ATAGGGATGT TGAATCCATC AATAACAGAA ATATCCCAAA AATCTAGGTT ACCAAACTGG 8136 .......... .......... .......... .......... .......... .......... 218 TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA ATCCAGGACT 8076 .......... .......... .......... .......... .......... .......... 218 CCACCACAAT CACCAGTCTG GCACCAACCT CTTCCAGCAC CATCAAAGTT GCAATTAGTA 8016 .......... .......... .......... .......... .......... .......... 218 CGACCCCAAA TACGTGCCAT TTTAGTGCCA GGTGGGGCCC AAAACCACCA ACTCTGACCT 7956 .......... .......... .......... .......... .......... .......... 218 CTCTCGAGAC GTCGACCACC TCCTACGGGG ACCGCTGCCG CCCAAACGGT GTAGGGGCAG 7896 .......... .......... .......... .......... .......... .......... 218 TTGTTATGGA CCTCAAATAC ACCGGAACCA TAAGTGTAAG TCACAAAGGC AAGGAGAAAA 7836 .......... .......... .......... .......... .......... .......... 218 AACACTAAAC AAGTTGTCAA GTGACTCATT TTAGTATAAG AAGTTGTAGG ATATATTTGC 7776 .......... .......... .......... .......... .......... .......... 218 ATATCGAGCT AGGGGTTTAT ATAGTGGTAT GGCGGCTTTT TTTCACTATG GACATTAATC 7716 .......... .......... .......... .......... .......... .......... 218 ATATAAATAT TGGCACTTGT TATAAACATA TATAGAAAAT TAAAAAAAAA AATTGTATCC 7656 .......... .......... .......... .......... .......... .......... 218 AAAATATCTC CACTTGAAAA AAAAAGCCGC CAATATAATA TGAGTACAGC CTATTATAAG 7596 .......... .......... .......... .......... .......... .......... 218 TAATATATTT TGTTCACTCC AGTCATATTT CACAGTTCAA CTTTTTGCTA TTTTGAAAAT 7536 .......... .......... .......... .......... .......... .......... 218 TTATGCATTA ACACATTATG ATATTTATAA TGATTAAAAA AAAAAGAGAA GATATTTTTT 7476 .......... .......... .......... .......... .......... .......... 218 AATTAAGTGA TATATACGTA TTATTAGTTT TGTGTTTAAC TATATATTAA TTTTAAATTA 7416 .......... .......... .......... .......... .......... .......... 218 TTTAGTTTAG TATATACAAC AAATCGGAAA AATGCATGGC AGGGCATGAA ACCTAAAATT 7356 .......... .......... .......... .......... .......... .......... 218 GTGGAAAATT TCCTAATTTT TTTTGAACAT TTTTTCATGA GAAATTTAGT TAGTAGAGAA 7296 .......... .......... .......... .......... .......... .......... 218 TTCTCTTCAT AATTTTTATT GGTTATGTTT TCATAAATAA AATAACTTAA AAATTTTGAA 7236 .......... .......... .......... .......... .......... .......... 218 TTACAAATTT GTAATTTTTG TTTACAGACA ATTGCCTTTT TTCCCTTGAT TATTTTTTTC 7176 .......... .......... .......... .......... .......... .......... 218 CGTCGTATAT ATATAGTGGA TTTTTATATT AAATTATTTA TAGCATATTT ATCAAGTGGA 7116 .......... .......... .......... .......... .......... .......... 218 CATAATAATT AATTGAAAAT GTGCATGCAT TCTACAGTCA AAAAAGTTGA GCAAATGGGT 7056 .......... .......... .......... .......... .......... .......... 218 AGGCGTAGAG ATGAGTGGAA CCTTAAAAGT TTGAATTTTT TTTTTATTCG ATACAAGCTA 6996 .......... .......... .......... .......... .......... .......... 218 TGTAGGTCTT GTTTCACACG AGAAAAATGA ATTTTGAAAT TAGTTATGAA TTTCGTTACT 6936 .......... .......... .......... .......... .......... .......... 218 AATCTATCTC TAATATGCAA AGTTTTGAAT AATCTATCCC TAATTGGTTA CTAGATATAG 6876 .......... .......... .......... .......... .......... .......... 218 AACTAGCAAT GATTTTTGTT ATTGATTGAA TAATTTGTTC GATATTGATT TTTGTTTTAT 6816 .......... .......... .......... .......... .......... .......... 218 GTTTCCTCCG TCCGATATTG TTTGTTATGG TTTCTATTTA TAGACTCAAA CTATAAAAAC 6756 .......... .......... .......... .......... .......... .......... 218 TTTGACTAAC ATTTGAAGAT ACATTTTTTT ATCATATTAA TATGAAAAGA TTGTAATTTA 6696 .......... .......... .......... .......... .......... .......... 218 TAGTACTTTT CATATTGTTT TAGAATATTT AATTTTTTTG GTTTAAAGTA TCGAATTAAT 6636 .......... .......... .......... .......... .......... .......... 218 GTGATTTAAT TTACCTTTAG AAATCAATCA AAATTGACTT TCGATAAGCG TAACATGACA 6576 .......... .......... .......... .......... .......... .......... 218 AATATTTCTG GACGGAGGGA GTATTGATTT TTTATCGTTG TCATCATGGT CGTCTTTGTT 6516 .......... .......... .......... .......... .......... .......... 218 TGTTGGTTCA TAATAAGATA TTCTTGAGTT TAAATGAGAT GATTGTATAT TTGAGTTTAA 6456 .......... .......... .......... .......... .......... .......... 218 TTTTGGAACA TGCAAGAGTT TTTGGATTTG ATTTTGATCG GTAGATGTAC TAGTACCTGC 6396 .......... .......... .......... .......... .......... .......... 218 CACCAAAACA TCGTGAAGGA TTCAGTGAAC GACTTGAAAC TTAGTAACAC AAGACAATTC 6336 .......... .......... .......... .......... .......... .......... 218 ACTGAATGGT TGTTGGCTCT ACCGGAGGAG TCTGAAATCA ACAACGTGTA ACTGCTTGGG 6276 .......... .......... .......... .......... .......... .......... 218 CAGAATAAAA GAACTTAAAT TGTTTTAATA GAATTTTTTA AGTAACATTG CAATTATTTA 6216 .......... .......... .......... .......... .......... .......... 218 AGCAATACGA ACGCCCAATT GTATTTTATT TTATTTTTTT ATAATAAAAG AGTTTTGGAA 6156 .......... .......... .......... .......... .......... .......... 218 GTAATGAATT TTAATACAAT ATCAATATTT AAATAATGTT GAATTCTTAG CTTAGGCATT 6096 .......... .......... .......... .......... .......... .......... 218 GAATCGCAAT TGAAAGTGAA AGCCCTTTTT TGCTATTTCA AGTTATGAAT TCAGATACTA 6036 .......... .......... .......... .......... .......... .......... 218 AAGGATAACG TCTTTTAGAA GGAAGATATT AATGGGGTAA GTGATTTTTA AAAGTTGACT 5976 .......... .......... .......... .......... .......... .......... 218 TTTATATAAA ATTATCTTCT TCTTTTTTCT TTTTCTTTTT TGTATATCGA CTCATTTAAT 5916 .......... .......... .......... .......... .......... .......... 218 TATCAGTTTA ACTTAATGTT CGAATCTTTA AGCTTTTTAA TTAATATTGA ATTTATTATT 5856 .......... .......... .......... .......... .......... .......... 218 TCTTTAAACT TATAAATTCA AATCTAAACA CTTATTAAAA TTTTAATGAA TTTTCATATA 5796 .......... .......... .......... .......... .......... .......... 218 CTATAGTATA CTTGAAAATG TTCCAAAAGC CGCCAATAAA AAAATATTTC CATCTGTTTG 5736 .......... .......... .......... .......... .......... .......... 218 ACTTATATTA TGACATGTAA CGAGTTGTCC CTACAATTTT ATATTTTCAG ATCTAGGTAC 5676 .......... .......... .......... .......... .......... .......... 218 TTTAATATAT TAACTAGACT AATTTTTTTT CATTATAATT AAAAATTTTA AGAAAAAAAC 5616 .......... .......... .......... .......... .......... .......... 218 TGTACTCCAG ATATAATTTC AATTTAAAAT TAAAATACCA TATATAAGAC AAAGCATCGA 5556 .......... .......... .......... .......... .......... .......... 218 TCATAGATTG TTATTCAGAT CTTAGCCACT TCAAACAAAC AAATGTAAAA GAAATGTGTA 5496 .......... .......... .......... .......... .......... .......... 218 CAAGGCAAAT TAAAGACAAT GTCCATCTTC AAAACAAATT TAACAAAAAA GAGATTGGCT 5436 .......... .......... .......... .......... .......... .......... 218 CAACTCAAGA TTTCTACTTA ATTAAGCCAC TTCAAGAGTA TTTGTAGGAA TCTCCAATGG 5376 .......... .......... .......... .......... .......... .......... 218 GAAATTTGTT GTTTCATTGT GAGTAGAGCC ATAAGGACAA AACATAACCT TGTAGTCTGT 5316 | || || ||||||| || | |||| | |||| ||| .......... .......... ......A-CC ATTAGGACAA AAGACAACCC TATAGTTTGT 251 AGTCCAACTC TGACAAGTAA AAGTACTTGT TGGATCGTCT TGAGGATAAC TATAGGCATC 5256 | | | || | ||||||| | || ||||| ||||||||| || || || | |||| ||||| ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC 311 GGGACATCTT TGTTTGAAAA ATCTTGACAA ATCGGTAGGA CCACATGGAC CTTGAGTGCA 5196 |||||||||| | ||||||| || | ||||| || ||||| |||||||||| |||| ||||| GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA 371 ACAATATTGT TGTCCTCCGA ATGTAGTACA AGGGTTGTTA CATCCTCCGG GTACCCTAAG 5136 |||||||||| |||||||| | | || ||||| |||||||||| |||||||| | ||||| |||| ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG 431 TGAACCAGGG CATTCACCGT TTATATTAGC AACACATTGA ATTGGATGAC ATTTTCCCGG 5076 | | ||| |||||||| | ||||||| || || ||| |||| |||| ||||||| GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC 491 CCCAGGGTTA GTTGGGCCGA AAGACATAGG GATGTTGAAT CCATCAATAA CAGAAATGTC 5016 | ||| || |||||| | | ||| ||| || || || ||| ||||| | | ||||||||| ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC 551 CCAGAAATCT AAGTTGCTAA ATTGATTCAA AGCGTATTCA GCTAAGGTGT TTGGTGGTTT 4956 ||| |||||| |||||||||| | || | ||| ||||| || |||| ||||| |||| ||||| CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT 611 ACCCCATCCT TTGCATTCCA AGACTCCACC ACAATCACCG GTCTGGCACC AACCTCTACC 4896 |||||||| | || | | |||||||||| ||||||||| || || || |||||| || GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA GTATGACATG TACCTCTGCC 671 AGCACCATCA AAATTGCAAT TAGTACGACC CCAAATACGT GCCATTTTGG TGCCC 4841 ||| ||| | || |||||| ||||||||| ||| |||||| ||||| || | | ||| TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCC 726 hqPGS_C08HBa0235H18.1-_SGN-E210719- (8555 8503,5349 4841) ******************************************************************************** EST sequence 36 -strand 712 n (File: SGN-E210726-) 1 TATTCCGGTT CTTTAAGTTT GTTACGAACT CTTATCAATA AAGTAAAAGT GAATATTTAA 61 AAAACTGAGC TATTAAGATT TTTCATTACG GTAGAGATCA GTTGACTAAT TGAGGCGATT 121 TAAAATGAAG AAACTCAAAT TCACTTGGCC ACTTCATCAG TACTTGCAGG CATCTCCAAG 181 GGGAAATTTG GATCAGCAAC ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA 241 CCAGGGCAAG TAAATGTGCT TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT 301 CTTTTCTTGA AAAATTTGGA CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT 361 TGTTGTCCTC CAAACGTGGT ACAAGGGTTG TTACATCCTC CAGGTACCTT AAGGGCGCGA 421 GGACATTCAC CATTTATATT GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT 481 TTTGTTGGGG CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA 541 TCTAAGTTGC TAAACTGGTC CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT 601 CCGGTACACT GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA 661 TTAAAGTTGC AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT CG Predicted gene structure (within gDNA segment 12462 to 4646): Exon 1 8555 8503 ( 53 n); cDNA 148 200 ( 53 n); score: 0.755 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0.76), Pa: 0.189 (s: 0.72) Exon 2 5349 4841 ( 509 n); cDNA 201 708 ( 508 n); score: 0.807 MATCH C08HBa0235H18.1- SGN-E210726- 0.802 562 0.789 C PGS_C08HBa0235H18.1-_SGN-E210726- (8555 8503,5349 4841) Alignment (genomic DNA sequence = upper lines): GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA 8496 || |||||| |||||||| |||||||||| || ||||||| ||| | | GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTGGATCAGC AAC....... 200 GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA 8436 .......... .......... .......... .......... .......... .......... 200 CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT GAAAAATCTT 8376 .......... .......... .......... .......... .......... .......... 200 GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC TCCGAATGTT 8316 .......... .......... .......... .......... .......... .......... 200 GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC ACCGTTTATA 8256 .......... .......... .......... .......... .......... .......... 200 TTGGCTGTGC ATTGAATTGG ATGACATTTT CCAGGGCCAG GCTTAGTTGG GCCAAAAGAC 8196 .......... .......... .......... .......... .......... .......... 200 ATAGGGATGT TGAATCCATC AATAACAGAA ATATCCCAAA AATCTAGGTT ACCAAACTGG 8136 .......... .......... .......... .......... .......... .......... 200 TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA ATCCAGGACT 8076 .......... .......... .......... .......... .......... .......... 200 CCACCACAAT CACCAGTCTG GCACCAACCT CTTCCAGCAC CATCAAAGTT GCAATTAGTA 8016 .......... .......... .......... .......... .......... .......... 200 CGACCCCAAA TACGTGCCAT TTTAGTGCCA GGTGGGGCCC AAAACCACCA ACTCTGACCT 7956 .......... .......... .......... .......... .......... .......... 200 CTCTCGAGAC GTCGACCACC TCCTACGGGG ACCGCTGCCG CCCAAACGGT GTAGGGGCAG 7896 .......... .......... .......... .......... .......... .......... 200 TTGTTATGGA CCTCAAATAC ACCGGAACCA TAAGTGTAAG TCACAAAGGC AAGGAGAAAA 7836 .......... .......... .......... .......... .......... .......... 200 AACACTAAAC AAGTTGTCAA GTGACTCATT TTAGTATAAG AAGTTGTAGG ATATATTTGC 7776 .......... .......... .......... .......... .......... .......... 200 ATATCGAGCT AGGGGTTTAT ATAGTGGTAT GGCGGCTTTT TTTCACTATG GACATTAATC 7716 .......... .......... .......... .......... .......... .......... 200 ATATAAATAT TGGCACTTGT TATAAACATA TATAGAAAAT TAAAAAAAAA AATTGTATCC 7656 .......... .......... .......... .......... .......... .......... 200 AAAATATCTC CACTTGAAAA AAAAAGCCGC CAATATAATA TGAGTACAGC CTATTATAAG 7596 .......... .......... .......... .......... .......... .......... 200 TAATATATTT TGTTCACTCC AGTCATATTT CACAGTTCAA CTTTTTGCTA TTTTGAAAAT 7536 .......... .......... .......... .......... .......... .......... 200 TTATGCATTA ACACATTATG ATATTTATAA TGATTAAAAA AAAAAGAGAA GATATTTTTT 7476 .......... .......... .......... .......... .......... .......... 200 AATTAAGTGA TATATACGTA TTATTAGTTT TGTGTTTAAC TATATATTAA TTTTAAATTA 7416 .......... .......... .......... .......... .......... .......... 200 TTTAGTTTAG TATATACAAC AAATCGGAAA AATGCATGGC AGGGCATGAA ACCTAAAATT 7356 .......... .......... .......... .......... .......... .......... 200 GTGGAAAATT TCCTAATTTT TTTTGAACAT TTTTTCATGA GAAATTTAGT TAGTAGAGAA 7296 .......... .......... .......... .......... .......... .......... 200 TTCTCTTCAT AATTTTTATT GGTTATGTTT TCATAAATAA AATAACTTAA AAATTTTGAA 7236 .......... .......... .......... .......... .......... .......... 200 TTACAAATTT GTAATTTTTG TTTACAGACA ATTGCCTTTT TTCCCTTGAT TATTTTTTTC 7176 .......... .......... .......... .......... .......... .......... 200 CGTCGTATAT ATATAGTGGA TTTTTATATT AAATTATTTA TAGCATATTT ATCAAGTGGA 7116 .......... .......... .......... .......... .......... .......... 200 CATAATAATT AATTGAAAAT GTGCATGCAT TCTACAGTCA AAAAAGTTGA GCAAATGGGT 7056 .......... .......... .......... .......... .......... .......... 200 AGGCGTAGAG ATGAGTGGAA CCTTAAAAGT TTGAATTTTT TTTTTATTCG ATACAAGCTA 6996 .......... .......... .......... .......... .......... .......... 200 TGTAGGTCTT GTTTCACACG AGAAAAATGA ATTTTGAAAT TAGTTATGAA TTTCGTTACT 6936 .......... .......... .......... .......... .......... .......... 200 AATCTATCTC TAATATGCAA AGTTTTGAAT AATCTATCCC TAATTGGTTA CTAGATATAG 6876 .......... .......... .......... .......... .......... .......... 200 AACTAGCAAT GATTTTTGTT ATTGATTGAA TAATTTGTTC GATATTGATT TTTGTTTTAT 6816 .......... .......... .......... .......... .......... .......... 200 GTTTCCTCCG TCCGATATTG TTTGTTATGG TTTCTATTTA TAGACTCAAA CTATAAAAAC 6756 .......... .......... .......... .......... .......... .......... 200 TTTGACTAAC ATTTGAAGAT ACATTTTTTT ATCATATTAA TATGAAAAGA TTGTAATTTA 6696 .......... .......... .......... .......... .......... .......... 200 TAGTACTTTT CATATTGTTT TAGAATATTT AATTTTTTTG GTTTAAAGTA TCGAATTAAT 6636 .......... .......... .......... .......... .......... .......... 200 GTGATTTAAT TTACCTTTAG AAATCAATCA AAATTGACTT TCGATAAGCG TAACATGACA 6576 .......... .......... .......... .......... .......... .......... 200 AATATTTCTG GACGGAGGGA GTATTGATTT TTTATCGTTG TCATCATGGT CGTCTTTGTT 6516 .......... .......... .......... .......... .......... .......... 200 TGTTGGTTCA TAATAAGATA TTCTTGAGTT TAAATGAGAT GATTGTATAT TTGAGTTTAA 6456 .......... .......... .......... .......... .......... .......... 200 TTTTGGAACA TGCAAGAGTT TTTGGATTTG ATTTTGATCG GTAGATGTAC TAGTACCTGC 6396 .......... .......... .......... .......... .......... .......... 200 CACCAAAACA TCGTGAAGGA TTCAGTGAAC GACTTGAAAC TTAGTAACAC AAGACAATTC 6336 .......... .......... .......... .......... .......... .......... 200 ACTGAATGGT TGTTGGCTCT ACCGGAGGAG TCTGAAATCA ACAACGTGTA ACTGCTTGGG 6276 .......... .......... .......... .......... .......... .......... 200 CAGAATAAAA GAACTTAAAT TGTTTTAATA GAATTTTTTA AGTAACATTG CAATTATTTA 6216 .......... .......... .......... .......... .......... .......... 200 AGCAATACGA ACGCCCAATT GTATTTTATT TTATTTTTTT ATAATAAAAG AGTTTTGGAA 6156 .......... .......... .......... .......... .......... .......... 200 GTAATGAATT TTAATACAAT ATCAATATTT AAATAATGTT GAATTCTTAG CTTAGGCATT 6096 .......... .......... .......... .......... .......... .......... 200 GAATCGCAAT TGAAAGTGAA AGCCCTTTTT TGCTATTTCA AGTTATGAAT TCAGATACTA 6036 .......... .......... .......... .......... .......... .......... 200 AAGGATAACG TCTTTTAGAA GGAAGATATT AATGGGGTAA GTGATTTTTA AAAGTTGACT 5976 .......... .......... .......... .......... .......... .......... 200 TTTATATAAA ATTATCTTCT TCTTTTTTCT TTTTCTTTTT TGTATATCGA CTCATTTAAT 5916 .......... .......... .......... .......... .......... .......... 200 TATCAGTTTA ACTTAATGTT CGAATCTTTA AGCTTTTTAA TTAATATTGA ATTTATTATT 5856 .......... .......... .......... .......... .......... .......... 200 TCTTTAAACT TATAAATTCA AATCTAAACA CTTATTAAAA TTTTAATGAA TTTTCATATA 5796 .......... .......... .......... .......... .......... .......... 200 CTATAGTATA CTTGAAAATG TTCCAAAAGC CGCCAATAAA AAAATATTTC CATCTGTTTG 5736 .......... .......... .......... .......... .......... .......... 200 ACTTATATTA TGACATGTAA CGAGTTGTCC CTACAATTTT ATATTTTCAG ATCTAGGTAC 5676 .......... .......... .......... .......... .......... .......... 200 TTTAATATAT TAACTAGACT AATTTTTTTT CATTATAATT AAAAATTTTA AGAAAAAAAC 5616 .......... .......... .......... .......... .......... .......... 200 TGTACTCCAG ATATAATTTC AATTTAAAAT TAAAATACCA TATATAAGAC AAAGCATCGA 5556 .......... .......... .......... .......... .......... .......... 200 TCATAGATTG TTATTCAGAT CTTAGCCACT TCAAACAAAC AAATGTAAAA GAAATGTGTA 5496 .......... .......... .......... .......... .......... .......... 200 CAAGGCAAAT TAAAGACAAT GTCCATCTTC AAAACAAATT TAACAAAAAA GAGATTGGCT 5436 .......... .......... .......... .......... .......... .......... 200 CAACTCAAGA TTTCTACTTA ATTAAGCCAC TTCAAGAGTA TTTGTAGGAA TCTCCAATGG 5376 .......... .......... .......... .......... .......... .......... 200 GAAATTTGTT GTTTCATTGT GAGTAGAGCC ATAAGGACAA AACATAACCT TGTAGTCTGT 5316 | || || ||||||| || | |||| | |||| ||| .......... .......... ......A-CC ATTAGGACAA AAGACAACCC TATAGTTTGT 233 AGTCCAACTC TGACAAGTAA AAGTACTTGT TGGATCGTCT TGAGGATAAC TATAGGCATC 5256 | | | || | ||||||| | || ||||| ||||||||| || || || | |||| ||||| ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC 293 GGGACATCTT TGTTTGAAAA ATCTTGACAA ATCGGTAGGA CCACATGGAC CTTGAGTGCA 5196 |||||||||| | ||||||| || | ||||| || ||||| |||||||||| |||| ||||| GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA 353 ACAATATTGT TGTCCTCCGA ATGTAGTACA AGGGTTGTTA CATCCTCCGG GTACCCTAAG 5136 |||||||||| |||||||| | | || ||||| |||||||||| |||||||| | ||||| |||| ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG 413 TGAACCAGGG CATTCACCGT TTATATTAGC AACACATTGA ATTGGATGAC ATTTTCCCGG 5076 | | ||| |||||||| | ||||||| || || ||| |||| |||| ||||||| GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC 473 CCCAGGGTTA GTTGGGCCGA AAGACATAGG GATGTTGAAT CCATCAATAA CAGAAATGTC 5016 | ||| || |||||| | | ||| ||| || || || ||| ||||| | | ||||||||| ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC 533 CCAGAAATCT AAGTTGCTAA ATTGATTCAA AGCGTATTCA GCTAAGGTGT TTGGTGGTTT 4956 ||| |||||| |||||||||| | || | ||| ||||| || |||| ||||| |||| ||||| CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT 593 ACCCCATCCT TTGCATTCCA AGACTCCACC ACAATCACCG GTCTGGCACC AACCTCTACC 4896 |||||||| | || | | |||||||||| ||||||||| ||||| || |||||| || GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC 653 AGCACCATCA AAATTGCAAT TAGTACGACC CCAAATACGT GCCATTTTGG TGCCC 4841 ||| ||| | || |||||| ||||||||| ||| |||||| ||||| || | | ||| TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCC 708 hqPGS_C08HBa0235H18.1-_SGN-E210726- (8555 8503,5349 4841) ******************************************************************************** EST sequence 45 -strand 713 n (File: SGN-E210944-) 1 TATCAATAAA GTAAAAGTGA ATATTTAAAA AACTGAGCTA TTAAGATTTT TCATTACGGT 61 AGAGATCAGT TGACTAATTG AGGCGATTTA AAATGAAGAA ACTCAAATTC ACTTGGCCAC 121 TTCATCAGTA CTTGCAGGCA TCTCCAAGGG GAAATTTGGA TCAGCAACAC CATTAGGACA 181 AAAGACAACC CTATAGTTTG TACTACCACC AGGGCAAGTA AATGTGCTTG TAGGATCGTC 241 TTGTGGGTAG CTATAAGCAT CGGGACATCT TTTCTTGAAA AATTTGGACA ACTCTGTAGG 301 GCCACATGGA CCTTGGGTGC AACAATATTG TTGTCCTCCA AACGTGGTAC AAGGGTTGTT 361 ACATCCTCCA GGTACCTTAA GGGCGCGAGG ACATTCACCA TTTATATTGG CCGTGCAATG 421 AATTGCGTGA CATTTTCCTC CACTAGGTTT TGTTGGGGCA AAAGTCATTG GAATATTAAA 481 TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA AACTGGTCCA AGGCGTACTC 541 GGCTAGGGTG TTTGGGGGTT TGCCCCATCC GGTACACTGT AAGACTCCAC CACAATCACC 601 AGTCTGACAT GTACCTCTGC CTGCAGCATT AAAGTTGCAA CCAGTACGAC CCCATATACG 661 TGCCATCTTA GTTCCCCTCG GAGCATTGAT GACCCATGTT TGGCCTCGAT TGA Predicted gene structure (within gDNA segment 12142 to 3716): Exon 1 8555 8503 ( 53 n); cDNA 116 168 ( 53 n); score: 0.755 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0.76), Pa: 0.189 (s: 0.72) Exon 2 5349 4845 ( 505 n); cDNA 169 672 ( 504 n); score: 0.808 MATCH C08HBa0235H18.1- SGN-E210944- 0.803 558 0.783 C PGS_C08HBa0235H18.1-_SGN-E210944- (8555 8503,5349 4845) Alignment (genomic DNA sequence = upper lines): GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA 8496 || |||||| |||||||| |||||||||| || ||||||| ||| | | GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTGGATCAGC AAC....... 168 GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA 8436 .......... .......... .......... .......... .......... .......... 168 CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT GAAAAATCTT 8376 .......... .......... .......... .......... .......... .......... 168 GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC TCCGAATGTT 8316 .......... .......... .......... .......... .......... .......... 168 GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC ACCGTTTATA 8256 .......... .......... .......... .......... .......... .......... 168 TTGGCTGTGC ATTGAATTGG ATGACATTTT CCAGGGCCAG GCTTAGTTGG GCCAAAAGAC 8196 .......... .......... .......... .......... .......... .......... 168 ATAGGGATGT TGAATCCATC AATAACAGAA ATATCCCAAA AATCTAGGTT ACCAAACTGG 8136 .......... .......... .......... .......... .......... .......... 168 TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA ATCCAGGACT 8076 .......... .......... .......... .......... .......... .......... 168 CCACCACAAT CACCAGTCTG GCACCAACCT CTTCCAGCAC CATCAAAGTT GCAATTAGTA 8016 .......... .......... .......... .......... .......... .......... 168 CGACCCCAAA TACGTGCCAT TTTAGTGCCA GGTGGGGCCC AAAACCACCA ACTCTGACCT 7956 .......... .......... .......... .......... .......... .......... 168 CTCTCGAGAC GTCGACCACC TCCTACGGGG ACCGCTGCCG CCCAAACGGT GTAGGGGCAG 7896 .......... .......... .......... .......... .......... .......... 168 TTGTTATGGA CCTCAAATAC ACCGGAACCA TAAGTGTAAG TCACAAAGGC AAGGAGAAAA 7836 .......... .......... .......... .......... .......... .......... 168 AACACTAAAC AAGTTGTCAA GTGACTCATT TTAGTATAAG AAGTTGTAGG ATATATTTGC 7776 .......... .......... .......... .......... .......... .......... 168 ATATCGAGCT AGGGGTTTAT ATAGTGGTAT GGCGGCTTTT TTTCACTATG GACATTAATC 7716 .......... .......... .......... .......... .......... .......... 168 ATATAAATAT TGGCACTTGT TATAAACATA TATAGAAAAT TAAAAAAAAA AATTGTATCC 7656 .......... .......... .......... .......... .......... .......... 168 AAAATATCTC CACTTGAAAA AAAAAGCCGC CAATATAATA TGAGTACAGC CTATTATAAG 7596 .......... .......... .......... .......... .......... .......... 168 TAATATATTT TGTTCACTCC AGTCATATTT CACAGTTCAA CTTTTTGCTA TTTTGAAAAT 7536 .......... .......... .......... .......... .......... .......... 168 TTATGCATTA ACACATTATG ATATTTATAA TGATTAAAAA AAAAAGAGAA GATATTTTTT 7476 .......... .......... .......... .......... .......... .......... 168 AATTAAGTGA TATATACGTA TTATTAGTTT TGTGTTTAAC TATATATTAA TTTTAAATTA 7416 .......... .......... .......... .......... .......... .......... 168 TTTAGTTTAG TATATACAAC AAATCGGAAA AATGCATGGC AGGGCATGAA ACCTAAAATT 7356 .......... .......... .......... .......... .......... .......... 168 GTGGAAAATT TCCTAATTTT TTTTGAACAT TTTTTCATGA GAAATTTAGT TAGTAGAGAA 7296 .......... .......... .......... .......... .......... .......... 168 TTCTCTTCAT AATTTTTATT GGTTATGTTT TCATAAATAA AATAACTTAA AAATTTTGAA 7236 .......... .......... .......... .......... .......... .......... 168 TTACAAATTT GTAATTTTTG TTTACAGACA ATTGCCTTTT TTCCCTTGAT TATTTTTTTC 7176 .......... .......... .......... .......... .......... .......... 168 CGTCGTATAT ATATAGTGGA TTTTTATATT AAATTATTTA TAGCATATTT ATCAAGTGGA 7116 .......... .......... .......... .......... .......... .......... 168 CATAATAATT AATTGAAAAT GTGCATGCAT TCTACAGTCA AAAAAGTTGA GCAAATGGGT 7056 .......... .......... .......... .......... .......... .......... 168 AGGCGTAGAG ATGAGTGGAA CCTTAAAAGT TTGAATTTTT TTTTTATTCG ATACAAGCTA 6996 .......... .......... .......... .......... .......... .......... 168 TGTAGGTCTT GTTTCACACG AGAAAAATGA ATTTTGAAAT TAGTTATGAA TTTCGTTACT 6936 .......... .......... .......... .......... .......... .......... 168 AATCTATCTC TAATATGCAA AGTTTTGAAT AATCTATCCC TAATTGGTTA CTAGATATAG 6876 .......... .......... .......... .......... .......... .......... 168 AACTAGCAAT GATTTTTGTT ATTGATTGAA TAATTTGTTC GATATTGATT TTTGTTTTAT 6816 .......... .......... .......... .......... .......... .......... 168 GTTTCCTCCG TCCGATATTG TTTGTTATGG TTTCTATTTA TAGACTCAAA CTATAAAAAC 6756 .......... .......... .......... .......... .......... .......... 168 TTTGACTAAC ATTTGAAGAT ACATTTTTTT ATCATATTAA TATGAAAAGA TTGTAATTTA 6696 .......... .......... .......... .......... .......... .......... 168 TAGTACTTTT CATATTGTTT TAGAATATTT AATTTTTTTG GTTTAAAGTA TCGAATTAAT 6636 .......... .......... .......... .......... .......... .......... 168 GTGATTTAAT TTACCTTTAG AAATCAATCA AAATTGACTT TCGATAAGCG TAACATGACA 6576 .......... .......... .......... .......... .......... .......... 168 AATATTTCTG GACGGAGGGA GTATTGATTT TTTATCGTTG TCATCATGGT CGTCTTTGTT 6516 .......... .......... .......... .......... .......... .......... 168 TGTTGGTTCA TAATAAGATA TTCTTGAGTT TAAATGAGAT GATTGTATAT TTGAGTTTAA 6456 .......... .......... .......... .......... .......... .......... 168 TTTTGGAACA TGCAAGAGTT TTTGGATTTG ATTTTGATCG GTAGATGTAC TAGTACCTGC 6396 .......... .......... .......... .......... .......... .......... 168 CACCAAAACA TCGTGAAGGA TTCAGTGAAC GACTTGAAAC TTAGTAACAC AAGACAATTC 6336 .......... .......... .......... .......... .......... .......... 168 ACTGAATGGT TGTTGGCTCT ACCGGAGGAG TCTGAAATCA ACAACGTGTA ACTGCTTGGG 6276 .......... .......... .......... .......... .......... .......... 168 CAGAATAAAA GAACTTAAAT TGTTTTAATA GAATTTTTTA AGTAACATTG CAATTATTTA 6216 .......... .......... .......... .......... .......... .......... 168 AGCAATACGA ACGCCCAATT GTATTTTATT TTATTTTTTT ATAATAAAAG AGTTTTGGAA 6156 .......... .......... .......... .......... .......... .......... 168 GTAATGAATT TTAATACAAT ATCAATATTT AAATAATGTT GAATTCTTAG CTTAGGCATT 6096 .......... .......... .......... .......... .......... .......... 168 GAATCGCAAT TGAAAGTGAA AGCCCTTTTT TGCTATTTCA AGTTATGAAT TCAGATACTA 6036 .......... .......... .......... .......... .......... .......... 168 AAGGATAACG TCTTTTAGAA GGAAGATATT AATGGGGTAA GTGATTTTTA AAAGTTGACT 5976 .......... .......... .......... .......... .......... .......... 168 TTTATATAAA ATTATCTTCT TCTTTTTTCT TTTTCTTTTT TGTATATCGA CTCATTTAAT 5916 .......... .......... .......... .......... .......... .......... 168 TATCAGTTTA ACTTAATGTT CGAATCTTTA AGCTTTTTAA TTAATATTGA ATTTATTATT 5856 .......... .......... .......... .......... .......... .......... 168 TCTTTAAACT TATAAATTCA AATCTAAACA CTTATTAAAA TTTTAATGAA TTTTCATATA 5796 .......... .......... .......... .......... .......... .......... 168 CTATAGTATA CTTGAAAATG TTCCAAAAGC CGCCAATAAA AAAATATTTC CATCTGTTTG 5736 .......... .......... .......... .......... .......... .......... 168 ACTTATATTA TGACATGTAA CGAGTTGTCC CTACAATTTT ATATTTTCAG ATCTAGGTAC 5676 .......... .......... .......... .......... .......... .......... 168 TTTAATATAT TAACTAGACT AATTTTTTTT CATTATAATT AAAAATTTTA AGAAAAAAAC 5616 .......... .......... .......... .......... .......... .......... 168 TGTACTCCAG ATATAATTTC AATTTAAAAT TAAAATACCA TATATAAGAC AAAGCATCGA 5556 .......... .......... .......... .......... .......... .......... 168 TCATAGATTG TTATTCAGAT CTTAGCCACT TCAAACAAAC AAATGTAAAA GAAATGTGTA 5496 .......... .......... .......... .......... .......... .......... 168 CAAGGCAAAT TAAAGACAAT GTCCATCTTC AAAACAAATT TAACAAAAAA GAGATTGGCT 5436 .......... .......... .......... .......... .......... .......... 168 CAACTCAAGA TTTCTACTTA ATTAAGCCAC TTCAAGAGTA TTTGTAGGAA TCTCCAATGG 5376 .......... .......... .......... .......... .......... .......... 168 GAAATTTGTT GTTTCATTGT GAGTAGAGCC ATAAGGACAA AACATAACCT TGTAGTCTGT 5316 | || || ||||||| || | |||| | |||| ||| .......... .......... ......A-CC ATTAGGACAA AAGACAACCC TATAGTTTGT 201 AGTCCAACTC TGACAAGTAA AAGTACTTGT TGGATCGTCT TGAGGATAAC TATAGGCATC 5256 | | | || | ||||||| | || ||||| ||||||||| || || || | |||| ||||| ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC 261 GGGACATCTT TGTTTGAAAA ATCTTGACAA ATCGGTAGGA CCACATGGAC CTTGAGTGCA 5196 |||||||||| | ||||||| || | ||||| || ||||| |||||||||| |||| ||||| GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA 321 ACAATATTGT TGTCCTCCGA ATGTAGTACA AGGGTTGTTA CATCCTCCGG GTACCCTAAG 5136 |||||||||| |||||||| | | || ||||| |||||||||| |||||||| | ||||| |||| ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG 381 TGAACCAGGG CATTCACCGT TTATATTAGC AACACATTGA ATTGGATGAC ATTTTCCCGG 5076 | | ||| |||||||| | ||||||| || || ||| |||| |||| ||||||| GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC 441 CCCAGGGTTA GTTGGGCCGA AAGACATAGG GATGTTGAAT CCATCAATAA CAGAAATGTC 5016 | ||| || |||||| | | ||| ||| || || || ||| ||||| | | ||||||||| ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC 501 CCAGAAATCT AAGTTGCTAA ATTGATTCAA AGCGTATTCA GCTAAGGTGT TTGGTGGTTT 4956 ||| |||||| |||||||||| | || | ||| ||||| || |||| ||||| |||| ||||| CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT 561 ACCCCATCCT TTGCATTCCA AGACTCCACC ACAATCACCG GTCTGGCACC AACCTCTACC 4896 |||||||| | || | | |||||||||| ||||||||| ||||| || |||||| || GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC 621 AGCACCATCA AAATTGCAAT TAGTACGACC CCAAATACGT GCCATTTTGG T 4845 ||| ||| | || |||||| ||||||||| ||| |||||| ||||| || | | TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG T 672 hqPGS_C08HBa0235H18.1-_SGN-E210944- (8555 8503,5349 4845) ******************************************************************************** EST sequence 590 +strand 667 n (File: SGN-E302617+) 1 TTTTTTTTTT TGTGATGATG TGACTTTTAT TCATGTAATT ATATTAGGTT TATTACAAGC 61 CAATTATATA ACTCGACTAC TTCAAGCAAT TTAAAAGAAA GTGACTCAAT TTTACTTAGC 121 CTCTTCATCA CTTGAGGGCA TCTCCAAGGG GAAATTTGGG CTAGTAACAC CATTAGGACA 181 AAAAACAACC CTATAATTTG TACTACCACT AGGGCAAGTA AATGTGCTAG TAGGATCATC 241 TTGTGGGTAG CTATACGCAT CAGGACATCT TTGTTTGAAA AATCTCGACA AATCAGTAGG 301 GCCACATGGA CCTTGTGTGC AACAATATTG TTGTCCTCCG AACGTGGTAC AAGGATTGTT 361 ACATCCTCCG GGTACCCTAA GTGAACCAGG ACATTCACCA TTTATATTAG CCGTACAATG 421 AATTGCATGG CATTTCCCTC CACTAGGATT GGTCGGGGCG AAAGTCATTG GAATATTAAA 481 TCCATCGACT AAAGAAATGT CCCAGAAATC TAGGTTGCTA AACTGGTCCA AGGCGTACTC 541 GGCCAGGGTG TTTGGTGGTT TGCCCCACCC GGTACATTGC AAGACCCCAC CACAATCACC 601 AGTCTGACAT GAACCTCTAC CAGCACCATC AAAGTTGCAA TTCGTACGAC CCCATATACG 661 TGCCATC Predicted gene structure (within gDNA segment 9560 to 1747): Exon 1 8541 8503 ( 39 n); cDNA 130 168 ( 39 n); score: 0.718 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0), Pa: 0.189 (s: 0.72) Exon 2 5349 4851 ( 499 n); cDNA 169 666 ( 498 n); score: 0.838 PPA cDNA 13 1 MATCH C08HBa0235H18.1- SGN-E302617+ 0.838 538 0.807 C PGS_C08HBa0235H18.1-_SGN-E302617+ (8541 8503,5349 4851) Alignment (genomic DNA sequence = upper lines): ACTTGTAGGC ATCTCCAATG GGAAATTTGT TGTTTCATTG TGAGTAGAGC CATAAGGACA 8482 ||||| ||| |||||||| | ||||||||| | | ACTTGAGGGC ATCTCCAAGG GGAAATTTGG GCTAGTAAC. .......... .......... 168 GAACATTATC TTGTAGTCTG TAGTCCAACT CTGACAAGTA AAAGTACTAG TTGGATCGTC 8422 .......... .......... .......... .......... .......... .......... 168 TTGAGGGTAA CTATAGGCAT CAGGACATCT TTGTTTGAAA AATCTTGACA ATTCAGTAGG 8362 .......... .......... .......... .......... .......... .......... 168 ACCACATGGA CCGTGATTAC AACAATATTG TTGTCCTCCG AATGTTGTAC AAGGGTTGTT 8302 .......... .......... .......... .......... .......... .......... 168 ACATCCTCCA GGTACCCTAA GTGAACCAGG GCATTCACCG TTTATATTGG CTGTGCATTG 8242 .......... .......... .......... .......... .......... .......... 168 AATTGGATGA CATTTTCCAG GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA 8182 .......... .......... .......... .......... .......... .......... 168 TCCATCAATA ACAGAAATAT CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC 8122 .......... .......... .......... .......... .......... .......... 168 AGCTAAGGTG TTTGGTGGTT TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC 8062 .......... .......... .......... .......... .......... .......... 168 AGTCTGGCAC CAACCTCTTC CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG 8002 .......... .......... .......... .......... .......... .......... 168 TGCCATTTTA GTGCCAGGTG GGGCCCAAAA CCACCAACTC TGACCTCTCT CGAGACGTCG 7942 .......... .......... .......... .......... .......... .......... 168 ACCACCTCCT ACGGGGACCG CTGCCGCCCA AACGGTGTAG GGGCAGTTGT TATGGACCTC 7882 .......... .......... .......... .......... .......... .......... 168 AAATACACCG GAACCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAAAACA CTAAACAAGT 7822 .......... .......... .......... .......... .......... .......... 168 TGTCAAGTGA CTCATTTTAG TATAAGAAGT TGTAGGATAT ATTTGCATAT CGAGCTAGGG 7762 .......... .......... .......... .......... .......... .......... 168 GTTTATATAG TGGTATGGCG GCTTTTTTTC ACTATGGACA TTAATCATAT AAATATTGGC 7702 .......... .......... .......... .......... .......... .......... 168 ACTTGTTATA AACATATATA GAAAATTAAA AAAAAAAATT GTATCCAAAA TATCTCCACT 7642 .......... .......... .......... .......... .......... .......... 168 TGAAAAAAAA AGCCGCCAAT ATAATATGAG TACAGCCTAT TATAAGTAAT ATATTTTGTT 7582 .......... .......... .......... .......... .......... .......... 168 CACTCCAGTC ATATTTCACA GTTCAACTTT TTGCTATTTT GAAAATTTAT GCATTAACAC 7522 .......... .......... .......... .......... .......... .......... 168 ATTATGATAT TTATAATGAT TAAAAAAAAA AGAGAAGATA TTTTTTAATT AAGTGATATA 7462 .......... .......... .......... .......... .......... .......... 168 TACGTATTAT TAGTTTTGTG TTTAACTATA TATTAATTTT AAATTATTTA GTTTAGTATA 7402 .......... .......... .......... .......... .......... .......... 168 TACAACAAAT CGGAAAAATG CATGGCAGGG CATGAAACCT AAAATTGTGG AAAATTTCCT 7342 .......... .......... .......... .......... .......... .......... 168 AATTTTTTTT GAACATTTTT TCATGAGAAA TTTAGTTAGT AGAGAATTCT CTTCATAATT 7282 .......... .......... .......... .......... .......... .......... 168 TTTATTGGTT ATGTTTTCAT AAATAAAATA ACTTAAAAAT TTTGAATTAC AAATTTGTAA 7222 .......... .......... .......... .......... .......... .......... 168 TTTTTGTTTA CAGACAATTG CCTTTTTTCC CTTGATTATT TTTTTCCGTC GTATATATAT 7162 .......... .......... .......... .......... .......... .......... 168 AGTGGATTTT TATATTAAAT TATTTATAGC ATATTTATCA AGTGGACATA ATAATTAATT 7102 .......... .......... .......... .......... .......... .......... 168 GAAAATGTGC ATGCATTCTA CAGTCAAAAA AGTTGAGCAA ATGGGTAGGC GTAGAGATGA 7042 .......... .......... .......... .......... .......... .......... 168 GTGGAACCTT AAAAGTTTGA ATTTTTTTTT TATTCGATAC AAGCTATGTA GGTCTTGTTT 6982 .......... .......... .......... .......... .......... .......... 168 CACACGAGAA AAATGAATTT TGAAATTAGT TATGAATTTC GTTACTAATC TATCTCTAAT 6922 .......... .......... .......... .......... .......... .......... 168 ATGCAAAGTT TTGAATAATC TATCCCTAAT TGGTTACTAG ATATAGAACT AGCAATGATT 6862 .......... .......... .......... .......... .......... .......... 168 TTTGTTATTG ATTGAATAAT TTGTTCGATA TTGATTTTTG TTTTATGTTT CCTCCGTCCG 6802 .......... .......... .......... .......... .......... .......... 168 ATATTGTTTG TTATGGTTTC TATTTATAGA CTCAAACTAT AAAAACTTTG ACTAACATTT 6742 .......... .......... .......... .......... .......... .......... 168 GAAGATACAT TTTTTTATCA TATTAATATG AAAAGATTGT AATTTATAGT ACTTTTCATA 6682 .......... .......... .......... .......... .......... .......... 168 TTGTTTTAGA ATATTTAATT TTTTTGGTTT AAAGTATCGA ATTAATGTGA TTTAATTTAC 6622 .......... .......... .......... .......... .......... .......... 168 CTTTAGAAAT CAATCAAAAT TGACTTTCGA TAAGCGTAAC ATGACAAATA TTTCTGGACG 6562 .......... .......... .......... .......... .......... .......... 168 GAGGGAGTAT TGATTTTTTA TCGTTGTCAT CATGGTCGTC TTTGTTTGTT GGTTCATAAT 6502 .......... .......... .......... .......... .......... .......... 168 AAGATATTCT TGAGTTTAAA TGAGATGATT GTATATTTGA GTTTAATTTT GGAACATGCA 6442 .......... .......... .......... .......... .......... .......... 168 AGAGTTTTTG GATTTGATTT TGATCGGTAG ATGTACTAGT ACCTGCCACC AAAACATCGT 6382 .......... .......... .......... .......... .......... .......... 168 GAAGGATTCA GTGAACGACT TGAAACTTAG TAACACAAGA CAATTCACTG AATGGTTGTT 6322 .......... .......... .......... .......... .......... .......... 168 GGCTCTACCG GAGGAGTCTG AAATCAACAA CGTGTAACTG CTTGGGCAGA ATAAAAGAAC 6262 .......... .......... .......... .......... .......... .......... 168 TTAAATTGTT TTAATAGAAT TTTTTAAGTA ACATTGCAAT TATTTAAGCA ATACGAACGC 6202 .......... .......... .......... .......... .......... .......... 168 CCAATTGTAT TTTATTTTAT TTTTTTATAA TAAAAGAGTT TTGGAAGTAA TGAATTTTAA 6142 .......... .......... .......... .......... .......... .......... 168 TACAATATCA ATATTTAAAT AATGTTGAAT TCTTAGCTTA GGCATTGAAT CGCAATTGAA 6082 .......... .......... .......... .......... .......... .......... 168 AGTGAAAGCC CTTTTTTGCT ATTTCAAGTT ATGAATTCAG ATACTAAAGG ATAACGTCTT 6022 .......... .......... .......... .......... .......... .......... 168 TTAGAAGGAA GATATTAATG GGGTAAGTGA TTTTTAAAAG TTGACTTTTA TATAAAATTA 5962 .......... .......... .......... .......... .......... .......... 168 TCTTCTTCTT TTTTCTTTTT CTTTTTTGTA TATCGACTCA TTTAATTATC AGTTTAACTT 5902 .......... .......... .......... .......... .......... .......... 168 AATGTTCGAA TCTTTAAGCT TTTTAATTAA TATTGAATTT ATTATTTCTT TAAACTTATA 5842 .......... .......... .......... .......... .......... .......... 168 AATTCAAATC TAAACACTTA TTAAAATTTT AATGAATTTT CATATACTAT AGTATACTTG 5782 .......... .......... .......... .......... .......... .......... 168 AAAATGTTCC AAAAGCCGCC AATAAAAAAA TATTTCCATC TGTTTGACTT ATATTATGAC 5722 .......... .......... .......... .......... .......... .......... 168 ATGTAACGAG TTGTCCCTAC AATTTTATAT TTTCAGATCT AGGTACTTTA ATATATTAAC 5662 .......... .......... .......... .......... .......... .......... 168 TAGACTAATT TTTTTTCATT ATAATTAAAA ATTTTAAGAA AAAAACTGTA CTCCAGATAT 5602 .......... .......... .......... .......... .......... .......... 168 AATTTCAATT TAAAATTAAA ATACCATATA TAAGACAAAG CATCGATCAT AGATTGTTAT 5542 .......... .......... .......... .......... .......... .......... 168 TCAGATCTTA GCCACTTCAA ACAAACAAAT GTAAAAGAAA TGTGTACAAG GCAAATTAAA 5482 .......... .......... .......... .......... .......... .......... 168 GACAATGTCC ATCTTCAAAA CAAATTTAAC AAAAAAGAGA TTGGCTCAAC TCAAGATTTC 5422 .......... .......... .......... .......... .......... .......... 168 TACTTAATTA AGCCACTTCA AGAGTATTTG TAGGAATCTC CAATGGGAAA TTTGTTGTTT 5362 .......... .......... .......... .......... .......... .......... 168 CATTGTGAGT AGAGCCATAA GGACAAAACA TAACCTTGTA GTCTGTAGTC CAACTCTGAC 5302 | |||| | |||||||| | |||| | || | |||| | | ||| | | .......... ..A-CCATTA GGACAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC 215 AAGTAAAAGT ACTTGTTGGA TCGTCTTGAG GATAACTATA GGCATCGGGA CATCTTTGTT 5242 ||||||| || || || ||| || ||||| | | || ||||| ||||| ||| |||||||||| AAGTAAATGT GCTAGTAGGA TCATCTTGTG GGTAGCTATA CGCATCAGGA CATCTTTGTT 275 TGAAAAATCT TGACAAATCG GTAGGACCAC ATGGACCTTG AGTGCAACAA TATTGTTGTC 5182 |||||||||| |||||||| ||||| |||| |||||||||| ||||||||| |||||||||| TGAAAAATCT CGACAAATCA GTAGGGCCAC ATGGACCTTG TGTGCAACAA TATTGTTGTC 335 CTCCGAATGT AGTACAAGGG TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGGCATT 5122 ||||||| || |||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CTCCGAACGT GGTACAAGGA TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGACATT 395 CACCGTTTAT ATTAGCAACA CATTGAATTG GATGACATTT TCCCGGCCCA GGGTTAGTTG 5062 |||| ||||| |||||| | || ||||||| ||| ||||| || | | || || || | CACCATTTAT ATTAGCCGTA CAATGAATTG CATGGCATTT CCCTCCACTA GGATTGGTCG 455 GGCCGAAAGA CATAGGGATG TTGAATCCAT CAATAACAGA AATGTCCCAG AAATCTAAGT 5002 || |||||| ||| || || || ||||||| | | | ||| |||||||||| ||||||| || GGGCGAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAG AAATCTAGGT 515 TGCTAAATTG ATTCAAAGCG TATTCAGCTA AGGTGTTTGG TGGTTTACCC CATCCTTTGC 4942 ||||||| || | ||| ||| || || || | ||||||||| |||||| ||| || || | | TGCTAAACTG GTCCAAGGCG TACTCGGCCA GGGTGTTTGG TGGTTTGCCC CACCCGGTAC 575 ATTCCAAGAC TCCACCACAA TCACCGGTCT GGCACCAACC TCTACCAGCA CCATCAAAAT 4882 ||| |||||| ||||||||| ||||| |||| | || |||| |||||||||| |||||||| | ATTGCAAGAC CCCACCACAA TCACCAGTCT GACATGAACC TCTACCAGCA CCATCAAAGT 635 TGCAATTAGT ACGACCCCAA ATACGTGCCA T 4851 ||||||| || ||||||||| |||||||||| | TGCAATTCGT ACGACCCCAT ATACGTGCCA T 666 hqPGS_C08HBa0235H18.1-_SGN-E302617+ (8541 8503,5349 4851) ******************************************************************************** EST sequence 77 -strand 722 n (File: SGN-E538599-) 1 AAGACAAAAG TACACATGAG ATGTAACTCT TATTCCGGTT CTTTAAGTTT GTTACGAACT 61 CTTATCAATA AAGTAAAAGT GAATATTTAA AAAACTGAGC TATTAAGATT TTTCATTACG 121 GTAGAGATCA GTTGACTAAT TGAGGCGATT TAAAATGAAG AAACTCAAAT TCACTTGGCC 181 ACTTCATCAG TACTTGCAGG CATCTCCAAG GGGAAATTTG GATCAGCAAC ACCATTAGGA 241 CAAAAGACAA CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT TGTAGGATCG 301 TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA CAACTCTGTA 361 GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT ACAAGGGTTG 421 TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT GGCCGTGCAA 481 TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT TGGAATATTA 541 AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGCGTAC 601 TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC ACCACAATCA 661 CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG ACCCCATATA 721 CG Predicted gene structure (within gDNA segment 13962 to 4846): Exon 1 8555 8503 ( 53 n); cDNA 178 230 ( 53 n); score: 0.755 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0.76), Pa: 0.189 (s: 0.72) Exon 2 5349 4857 ( 493 n); cDNA 231 722 ( 492 n); score: 0.807 MATCH C08HBa0235H18.1- SGN-E538599- 0.802 546 0.756 C PGS_C08HBa0235H18.1-_SGN-E538599- (8555 8503,5349 4857) Alignment (genomic DNA sequence = upper lines): GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA 8496 || |||||| |||||||| |||||||||| || ||||||| ||| | | GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTGGATCAGC AAC....... 230 GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA 8436 .......... .......... .......... .......... .......... .......... 230 CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT GAAAAATCTT 8376 .......... .......... .......... .......... .......... .......... 230 GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC TCCGAATGTT 8316 .......... .......... .......... .......... .......... .......... 230 GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC ACCGTTTATA 8256 .......... .......... .......... .......... .......... .......... 230 TTGGCTGTGC ATTGAATTGG ATGACATTTT CCAGGGCCAG GCTTAGTTGG GCCAAAAGAC 8196 .......... .......... .......... .......... .......... .......... 230 ATAGGGATGT TGAATCCATC AATAACAGAA ATATCCCAAA AATCTAGGTT ACCAAACTGG 8136 .......... .......... .......... .......... .......... .......... 230 TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA ATCCAGGACT 8076 .......... .......... .......... .......... .......... .......... 230 CCACCACAAT CACCAGTCTG GCACCAACCT CTTCCAGCAC CATCAAAGTT GCAATTAGTA 8016 .......... .......... .......... .......... .......... .......... 230 CGACCCCAAA TACGTGCCAT TTTAGTGCCA GGTGGGGCCC AAAACCACCA ACTCTGACCT 7956 .......... .......... .......... .......... .......... .......... 230 CTCTCGAGAC GTCGACCACC TCCTACGGGG ACCGCTGCCG CCCAAACGGT GTAGGGGCAG 7896 .......... .......... .......... .......... .......... .......... 230 TTGTTATGGA CCTCAAATAC ACCGGAACCA TAAGTGTAAG TCACAAAGGC AAGGAGAAAA 7836 .......... .......... .......... .......... .......... .......... 230 AACACTAAAC AAGTTGTCAA GTGACTCATT TTAGTATAAG AAGTTGTAGG ATATATTTGC 7776 .......... .......... .......... .......... .......... .......... 230 ATATCGAGCT AGGGGTTTAT ATAGTGGTAT GGCGGCTTTT TTTCACTATG GACATTAATC 7716 .......... .......... .......... .......... .......... .......... 230 ATATAAATAT TGGCACTTGT TATAAACATA TATAGAAAAT TAAAAAAAAA AATTGTATCC 7656 .......... .......... .......... .......... .......... .......... 230 AAAATATCTC CACTTGAAAA AAAAAGCCGC CAATATAATA TGAGTACAGC CTATTATAAG 7596 .......... .......... .......... .......... .......... .......... 230 TAATATATTT TGTTCACTCC AGTCATATTT CACAGTTCAA CTTTTTGCTA TTTTGAAAAT 7536 .......... .......... .......... .......... .......... .......... 230 TTATGCATTA ACACATTATG ATATTTATAA TGATTAAAAA AAAAAGAGAA GATATTTTTT 7476 .......... .......... .......... .......... .......... .......... 230 AATTAAGTGA TATATACGTA TTATTAGTTT TGTGTTTAAC TATATATTAA TTTTAAATTA 7416 .......... .......... .......... .......... .......... .......... 230 TTTAGTTTAG TATATACAAC AAATCGGAAA AATGCATGGC AGGGCATGAA ACCTAAAATT 7356 .......... .......... .......... .......... .......... .......... 230 GTGGAAAATT TCCTAATTTT TTTTGAACAT TTTTTCATGA GAAATTTAGT TAGTAGAGAA 7296 .......... .......... .......... .......... .......... .......... 230 TTCTCTTCAT AATTTTTATT GGTTATGTTT TCATAAATAA AATAACTTAA AAATTTTGAA 7236 .......... .......... .......... .......... .......... .......... 230 TTACAAATTT GTAATTTTTG TTTACAGACA ATTGCCTTTT TTCCCTTGAT TATTTTTTTC 7176 .......... .......... .......... .......... .......... .......... 230 CGTCGTATAT ATATAGTGGA TTTTTATATT AAATTATTTA TAGCATATTT ATCAAGTGGA 7116 .......... .......... .......... .......... .......... .......... 230 CATAATAATT AATTGAAAAT GTGCATGCAT TCTACAGTCA AAAAAGTTGA GCAAATGGGT 7056 .......... .......... .......... .......... .......... .......... 230 AGGCGTAGAG ATGAGTGGAA CCTTAAAAGT TTGAATTTTT TTTTTATTCG ATACAAGCTA 6996 .......... .......... .......... .......... .......... .......... 230 TGTAGGTCTT GTTTCACACG AGAAAAATGA ATTTTGAAAT TAGTTATGAA TTTCGTTACT 6936 .......... .......... .......... .......... .......... .......... 230 AATCTATCTC TAATATGCAA AGTTTTGAAT AATCTATCCC TAATTGGTTA CTAGATATAG 6876 .......... .......... .......... .......... .......... .......... 230 AACTAGCAAT GATTTTTGTT ATTGATTGAA TAATTTGTTC GATATTGATT TTTGTTTTAT 6816 .......... .......... .......... .......... .......... .......... 230 GTTTCCTCCG TCCGATATTG TTTGTTATGG TTTCTATTTA TAGACTCAAA CTATAAAAAC 6756 .......... .......... .......... .......... .......... .......... 230 TTTGACTAAC ATTTGAAGAT ACATTTTTTT ATCATATTAA TATGAAAAGA TTGTAATTTA 6696 .......... .......... .......... .......... .......... .......... 230 TAGTACTTTT CATATTGTTT TAGAATATTT AATTTTTTTG GTTTAAAGTA TCGAATTAAT 6636 .......... .......... .......... .......... .......... .......... 230 GTGATTTAAT TTACCTTTAG AAATCAATCA AAATTGACTT TCGATAAGCG TAACATGACA 6576 .......... .......... .......... .......... .......... .......... 230 AATATTTCTG GACGGAGGGA GTATTGATTT TTTATCGTTG TCATCATGGT CGTCTTTGTT 6516 .......... .......... .......... .......... .......... .......... 230 TGTTGGTTCA TAATAAGATA TTCTTGAGTT TAAATGAGAT GATTGTATAT TTGAGTTTAA 6456 .......... .......... .......... .......... .......... .......... 230 TTTTGGAACA TGCAAGAGTT TTTGGATTTG ATTTTGATCG GTAGATGTAC TAGTACCTGC 6396 .......... .......... .......... .......... .......... .......... 230 CACCAAAACA TCGTGAAGGA TTCAGTGAAC GACTTGAAAC TTAGTAACAC AAGACAATTC 6336 .......... .......... .......... .......... .......... .......... 230 ACTGAATGGT TGTTGGCTCT ACCGGAGGAG TCTGAAATCA ACAACGTGTA ACTGCTTGGG 6276 .......... .......... .......... .......... .......... .......... 230 CAGAATAAAA GAACTTAAAT TGTTTTAATA GAATTTTTTA AGTAACATTG CAATTATTTA 6216 .......... .......... .......... .......... .......... .......... 230 AGCAATACGA ACGCCCAATT GTATTTTATT TTATTTTTTT ATAATAAAAG AGTTTTGGAA 6156 .......... .......... .......... .......... .......... .......... 230 GTAATGAATT TTAATACAAT ATCAATATTT AAATAATGTT GAATTCTTAG CTTAGGCATT 6096 .......... .......... .......... .......... .......... .......... 230 GAATCGCAAT TGAAAGTGAA AGCCCTTTTT TGCTATTTCA AGTTATGAAT TCAGATACTA 6036 .......... .......... .......... .......... .......... .......... 230 AAGGATAACG TCTTTTAGAA GGAAGATATT AATGGGGTAA GTGATTTTTA AAAGTTGACT 5976 .......... .......... .......... .......... .......... .......... 230 TTTATATAAA ATTATCTTCT TCTTTTTTCT TTTTCTTTTT TGTATATCGA CTCATTTAAT 5916 .......... .......... .......... .......... .......... .......... 230 TATCAGTTTA ACTTAATGTT CGAATCTTTA AGCTTTTTAA TTAATATTGA ATTTATTATT 5856 .......... .......... .......... .......... .......... .......... 230 TCTTTAAACT TATAAATTCA AATCTAAACA CTTATTAAAA TTTTAATGAA TTTTCATATA 5796 .......... .......... .......... .......... .......... .......... 230 CTATAGTATA CTTGAAAATG TTCCAAAAGC CGCCAATAAA AAAATATTTC CATCTGTTTG 5736 .......... .......... .......... .......... .......... .......... 230 ACTTATATTA TGACATGTAA CGAGTTGTCC CTACAATTTT ATATTTTCAG ATCTAGGTAC 5676 .......... .......... .......... .......... .......... .......... 230 TTTAATATAT TAACTAGACT AATTTTTTTT CATTATAATT AAAAATTTTA AGAAAAAAAC 5616 .......... .......... .......... .......... .......... .......... 230 TGTACTCCAG ATATAATTTC AATTTAAAAT TAAAATACCA TATATAAGAC AAAGCATCGA 5556 .......... .......... .......... .......... .......... .......... 230 TCATAGATTG TTATTCAGAT CTTAGCCACT TCAAACAAAC AAATGTAAAA GAAATGTGTA 5496 .......... .......... .......... .......... .......... .......... 230 CAAGGCAAAT TAAAGACAAT GTCCATCTTC AAAACAAATT TAACAAAAAA GAGATTGGCT 5436 .......... .......... .......... .......... .......... .......... 230 CAACTCAAGA TTTCTACTTA ATTAAGCCAC TTCAAGAGTA TTTGTAGGAA TCTCCAATGG 5376 .......... .......... .......... .......... .......... .......... 230 GAAATTTGTT GTTTCATTGT GAGTAGAGCC ATAAGGACAA AACATAACCT TGTAGTCTGT 5316 | || || ||||||| || | |||| | |||| ||| .......... .......... ......A-CC ATTAGGACAA AAGACAACCC TATAGTTTGT 263 AGTCCAACTC TGACAAGTAA AAGTACTTGT TGGATCGTCT TGAGGATAAC TATAGGCATC 5256 | | | || | ||||||| | || ||||| ||||||||| || || || | |||| ||||| ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC 323 GGGACATCTT TGTTTGAAAA ATCTTGACAA ATCGGTAGGA CCACATGGAC CTTGAGTGCA 5196 |||||||||| | ||||||| || | ||||| || ||||| |||||||||| |||| ||||| GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA 383 ACAATATTGT TGTCCTCCGA ATGTAGTACA AGGGTTGTTA CATCCTCCGG GTACCCTAAG 5136 |||||||||| |||||||| | | || ||||| |||||||||| |||||||| | ||||| |||| ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG 443 TGAACCAGGG CATTCACCGT TTATATTAGC AACACATTGA ATTGGATGAC ATTTTCCCGG 5076 | | ||| |||||||| | ||||||| || || ||| |||| |||| ||||||| GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC 503 CCCAGGGTTA GTTGGGCCGA AAGACATAGG GATGTTGAAT CCATCAATAA CAGAAATGTC 5016 | ||| || |||||| | | ||| ||| || || || ||| ||||| | | ||||||||| ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC 563 CCAGAAATCT AAGTTGCTAA ATTGATTCAA AGCGTATTCA GCTAAGGTGT TTGGTGGTTT 4956 ||| |||||| |||||||||| | || | ||| ||||| || |||| ||||| |||| ||||| CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT 623 ACCCCATCCT TTGCATTCCA AGACTCCACC ACAATCACCG GTCTGGCACC AACCTCTACC 4896 |||||||| | || | | |||||||||| ||||||||| ||||| || |||||| || GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC 683 AGCACCATCA AAATTGCAAT TAGTACGACC CCAAATACG 4857 ||| ||| | || |||||| ||||||||| ||| ||||| TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACG 722 hqPGS_C08HBa0235H18.1-_SGN-E538599- (8555 8503,5349 4857) ******************************************************************************** EST sequence 72 -strand 580 n (File: SGN-E295156-) 1 TTTTTTTTTT TGTGATGATG TGACTTTTAT TCATGTAATT ATATTAGGTT TATNCCAAGC 61 CAATTATATA ACTCGACTAC TTCAAGCAAT TTAAAAGAAA GTGACTCAAT TTTACTTAGC 121 CTCTTCATCA CTTGAGGGCA TCTCCAAGGG GAAATTTGGG CTAGTAACAC CATTAGGACA 181 AAAAACAACC CTATAATTTG TACTACCACT AGGGCAAGTA AATGTGCTAG TAGGATCATC 241 TTGTGGGTAG CTATACGCAT CAGGACATCT TTGTTTGAAA AATCTCGACA AATCAGTAGG 301 GCCACATGGA CCTTGTGTGC AACAATATTG TTGTCCTCCG AACGTGGTAC AAGGATTGTT 361 ACATCCTCCG GGTACCCTAA GTGAACCAGG ACATTCACCA TTTATATTAG CCGTACAATG 421 AATTGCATGG CATTTCCCTC CACTAGGATT GGTCGGGGCG AAAGTCATTG GAATATTAAA 481 TCCATCGACT AAAGAAATGT CCCAGAAATC TAGGTTGCTA AACTGGTCCA AGGCGTACTC 541 GGCCAGGGTG TTTGGTGGTT TGCCCCACCC GGTACATTGC Predicted gene structure (within gDNA segment 9570 to 2627): Exon 1 8541 8503 ( 39 n); cDNA 130 168 ( 39 n); score: 0.718 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0), Pa: 0.189 (s: 0.72) Exon 2 5349 4939 ( 411 n); cDNA 169 578 ( 410 n); score: 0.825 PPA cDNA 13 1 MATCH C08HBa0235H18.1- SGN-E295156- 0.825 450 0.776 C PGS_C08HBa0235H18.1-_SGN-E295156- (8541 8503,5349 4939) Alignment (genomic DNA sequence = upper lines): ACTTGTAGGC ATCTCCAATG GGAAATTTGT TGTTTCATTG TGAGTAGAGC CATAAGGACA 8482 ||||| ||| |||||||| | ||||||||| | | ACTTGAGGGC ATCTCCAAGG GGAAATTTGG GCTAGTAAC. .......... .......... 168 GAACATTATC TTGTAGTCTG TAGTCCAACT CTGACAAGTA AAAGTACTAG TTGGATCGTC 8422 .......... .......... .......... .......... .......... .......... 168 TTGAGGGTAA CTATAGGCAT CAGGACATCT TTGTTTGAAA AATCTTGACA ATTCAGTAGG 8362 .......... .......... .......... .......... .......... .......... 168 ACCACATGGA CCGTGATTAC AACAATATTG TTGTCCTCCG AATGTTGTAC AAGGGTTGTT 8302 .......... .......... .......... .......... .......... .......... 168 ACATCCTCCA GGTACCCTAA GTGAACCAGG GCATTCACCG TTTATATTGG CTGTGCATTG 8242 .......... .......... .......... .......... .......... .......... 168 AATTGGATGA CATTTTCCAG GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA 8182 .......... .......... .......... .......... .......... .......... 168 TCCATCAATA ACAGAAATAT CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC 8122 .......... .......... .......... .......... .......... .......... 168 AGCTAAGGTG TTTGGTGGTT TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC 8062 .......... .......... .......... .......... .......... .......... 168 AGTCTGGCAC CAACCTCTTC CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG 8002 .......... .......... .......... .......... .......... .......... 168 TGCCATTTTA GTGCCAGGTG GGGCCCAAAA CCACCAACTC TGACCTCTCT CGAGACGTCG 7942 .......... .......... .......... .......... .......... .......... 168 ACCACCTCCT ACGGGGACCG CTGCCGCCCA AACGGTGTAG GGGCAGTTGT TATGGACCTC 7882 .......... .......... .......... .......... .......... .......... 168 AAATACACCG GAACCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAAAACA CTAAACAAGT 7822 .......... .......... .......... .......... .......... .......... 168 TGTCAAGTGA CTCATTTTAG TATAAGAAGT TGTAGGATAT ATTTGCATAT CGAGCTAGGG 7762 .......... .......... .......... .......... .......... .......... 168 GTTTATATAG TGGTATGGCG GCTTTTTTTC ACTATGGACA TTAATCATAT AAATATTGGC 7702 .......... .......... .......... .......... .......... .......... 168 ACTTGTTATA AACATATATA GAAAATTAAA AAAAAAAATT GTATCCAAAA TATCTCCACT 7642 .......... .......... .......... .......... .......... .......... 168 TGAAAAAAAA AGCCGCCAAT ATAATATGAG TACAGCCTAT TATAAGTAAT ATATTTTGTT 7582 .......... .......... .......... .......... .......... .......... 168 CACTCCAGTC ATATTTCACA GTTCAACTTT TTGCTATTTT GAAAATTTAT GCATTAACAC 7522 .......... .......... .......... .......... .......... .......... 168 ATTATGATAT TTATAATGAT TAAAAAAAAA AGAGAAGATA TTTTTTAATT AAGTGATATA 7462 .......... .......... .......... .......... .......... .......... 168 TACGTATTAT TAGTTTTGTG TTTAACTATA TATTAATTTT AAATTATTTA GTTTAGTATA 7402 .......... .......... .......... .......... .......... .......... 168 TACAACAAAT CGGAAAAATG CATGGCAGGG CATGAAACCT AAAATTGTGG AAAATTTCCT 7342 .......... .......... .......... .......... .......... .......... 168 AATTTTTTTT GAACATTTTT TCATGAGAAA TTTAGTTAGT AGAGAATTCT CTTCATAATT 7282 .......... .......... .......... .......... .......... .......... 168 TTTATTGGTT ATGTTTTCAT AAATAAAATA ACTTAAAAAT TTTGAATTAC AAATTTGTAA 7222 .......... .......... .......... .......... .......... .......... 168 TTTTTGTTTA CAGACAATTG CCTTTTTTCC CTTGATTATT TTTTTCCGTC GTATATATAT 7162 .......... .......... .......... .......... .......... .......... 168 AGTGGATTTT TATATTAAAT TATTTATAGC ATATTTATCA AGTGGACATA ATAATTAATT 7102 .......... .......... .......... .......... .......... .......... 168 GAAAATGTGC ATGCATTCTA CAGTCAAAAA AGTTGAGCAA ATGGGTAGGC GTAGAGATGA 7042 .......... .......... .......... .......... .......... .......... 168 GTGGAACCTT AAAAGTTTGA ATTTTTTTTT TATTCGATAC AAGCTATGTA GGTCTTGTTT 6982 .......... .......... .......... .......... .......... .......... 168 CACACGAGAA AAATGAATTT TGAAATTAGT TATGAATTTC GTTACTAATC TATCTCTAAT 6922 .......... .......... .......... .......... .......... .......... 168 ATGCAAAGTT TTGAATAATC TATCCCTAAT TGGTTACTAG ATATAGAACT AGCAATGATT 6862 .......... .......... .......... .......... .......... .......... 168 TTTGTTATTG ATTGAATAAT TTGTTCGATA TTGATTTTTG TTTTATGTTT CCTCCGTCCG 6802 .......... .......... .......... .......... .......... .......... 168 ATATTGTTTG TTATGGTTTC TATTTATAGA CTCAAACTAT AAAAACTTTG ACTAACATTT 6742 .......... .......... .......... .......... .......... .......... 168 GAAGATACAT TTTTTTATCA TATTAATATG AAAAGATTGT AATTTATAGT ACTTTTCATA 6682 .......... .......... .......... .......... .......... .......... 168 TTGTTTTAGA ATATTTAATT TTTTTGGTTT AAAGTATCGA ATTAATGTGA TTTAATTTAC 6622 .......... .......... .......... .......... .......... .......... 168 CTTTAGAAAT CAATCAAAAT TGACTTTCGA TAAGCGTAAC ATGACAAATA TTTCTGGACG 6562 .......... .......... .......... .......... .......... .......... 168 GAGGGAGTAT TGATTTTTTA TCGTTGTCAT CATGGTCGTC TTTGTTTGTT GGTTCATAAT 6502 .......... .......... .......... .......... .......... .......... 168 AAGATATTCT TGAGTTTAAA TGAGATGATT GTATATTTGA GTTTAATTTT GGAACATGCA 6442 .......... .......... .......... .......... .......... .......... 168 AGAGTTTTTG GATTTGATTT TGATCGGTAG ATGTACTAGT ACCTGCCACC AAAACATCGT 6382 .......... .......... .......... .......... .......... .......... 168 GAAGGATTCA GTGAACGACT TGAAACTTAG TAACACAAGA CAATTCACTG AATGGTTGTT 6322 .......... .......... .......... .......... .......... .......... 168 GGCTCTACCG GAGGAGTCTG AAATCAACAA CGTGTAACTG CTTGGGCAGA ATAAAAGAAC 6262 .......... .......... .......... .......... .......... .......... 168 TTAAATTGTT TTAATAGAAT TTTTTAAGTA ACATTGCAAT TATTTAAGCA ATACGAACGC 6202 .......... .......... .......... .......... .......... .......... 168 CCAATTGTAT TTTATTTTAT TTTTTTATAA TAAAAGAGTT TTGGAAGTAA TGAATTTTAA 6142 .......... .......... .......... .......... .......... .......... 168 TACAATATCA ATATTTAAAT AATGTTGAAT TCTTAGCTTA GGCATTGAAT CGCAATTGAA 6082 .......... .......... .......... .......... .......... .......... 168 AGTGAAAGCC CTTTTTTGCT ATTTCAAGTT ATGAATTCAG ATACTAAAGG ATAACGTCTT 6022 .......... .......... .......... .......... .......... .......... 168 TTAGAAGGAA GATATTAATG GGGTAAGTGA TTTTTAAAAG TTGACTTTTA TATAAAATTA 5962 .......... .......... .......... .......... .......... .......... 168 TCTTCTTCTT TTTTCTTTTT CTTTTTTGTA TATCGACTCA TTTAATTATC AGTTTAACTT 5902 .......... .......... .......... .......... .......... .......... 168 AATGTTCGAA TCTTTAAGCT TTTTAATTAA TATTGAATTT ATTATTTCTT TAAACTTATA 5842 .......... .......... .......... .......... .......... .......... 168 AATTCAAATC TAAACACTTA TTAAAATTTT AATGAATTTT CATATACTAT AGTATACTTG 5782 .......... .......... .......... .......... .......... .......... 168 AAAATGTTCC AAAAGCCGCC AATAAAAAAA TATTTCCATC TGTTTGACTT ATATTATGAC 5722 .......... .......... .......... .......... .......... .......... 168 ATGTAACGAG TTGTCCCTAC AATTTTATAT TTTCAGATCT AGGTACTTTA ATATATTAAC 5662 .......... .......... .......... .......... .......... .......... 168 TAGACTAATT TTTTTTCATT ATAATTAAAA ATTTTAAGAA AAAAACTGTA CTCCAGATAT 5602 .......... .......... .......... .......... .......... .......... 168 AATTTCAATT TAAAATTAAA ATACCATATA TAAGACAAAG CATCGATCAT AGATTGTTAT 5542 .......... .......... .......... .......... .......... .......... 168 TCAGATCTTA GCCACTTCAA ACAAACAAAT GTAAAAGAAA TGTGTACAAG GCAAATTAAA 5482 .......... .......... .......... .......... .......... .......... 168 GACAATGTCC ATCTTCAAAA CAAATTTAAC AAAAAAGAGA TTGGCTCAAC TCAAGATTTC 5422 .......... .......... .......... .......... .......... .......... 168 TACTTAATTA AGCCACTTCA AGAGTATTTG TAGGAATCTC CAATGGGAAA TTTGTTGTTT 5362 .......... .......... .......... .......... .......... .......... 168 CATTGTGAGT AGAGCCATAA GGACAAAACA TAACCTTGTA GTCTGTAGTC CAACTCTGAC 5302 | |||| | |||||||| | |||| | || | |||| | | ||| | | .......... ..A-CCATTA GGACAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC 215 AAGTAAAAGT ACTTGTTGGA TCGTCTTGAG GATAACTATA GGCATCGGGA CATCTTTGTT 5242 ||||||| || || || ||| || ||||| | | || ||||| ||||| ||| |||||||||| AAGTAAATGT GCTAGTAGGA TCATCTTGTG GGTAGCTATA CGCATCAGGA CATCTTTGTT 275 TGAAAAATCT TGACAAATCG GTAGGACCAC ATGGACCTTG AGTGCAACAA TATTGTTGTC 5182 |||||||||| |||||||| ||||| |||| |||||||||| ||||||||| |||||||||| TGAAAAATCT CGACAAATCA GTAGGGCCAC ATGGACCTTG TGTGCAACAA TATTGTTGTC 335 CTCCGAATGT AGTACAAGGG TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGGCATT 5122 ||||||| || |||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CTCCGAACGT GGTACAAGGA TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGACATT 395 CACCGTTTAT ATTAGCAACA CATTGAATTG GATGACATTT TCCCGGCCCA GGGTTAGTTG 5062 |||| ||||| |||||| | || ||||||| ||| ||||| || | | || || || | CACCATTTAT ATTAGCCGTA CAATGAATTG CATGGCATTT CCCTCCACTA GGATTGGTCG 455 GGCCGAAAGA CATAGGGATG TTGAATCCAT CAATAACAGA AATGTCCCAG AAATCTAAGT 5002 || |||||| ||| || || || ||||||| | | | ||| |||||||||| ||||||| || GGGCGAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAG AAATCTAGGT 515 TGCTAAATTG ATTCAAAGCG TATTCAGCTA AGGTGTTTGG TGGTTTACCC CATCCTTTGC 4942 ||||||| || | ||| ||| || || || | ||||||||| |||||| ||| || || | | TGCTAAACTG GTCCAAGGCG TACTCGGCCA GGGTGTTTGG TGGTTTGCCC CACCCGGTAC 575 ATT 4939 ||| ATT 578 hqPGS_C08HBa0235H18.1-_SGN-E295156- (8541 8503,5349 4939) ******************************************************************************** EST sequence 312 -strand 547 n (File: SGN-E354307-) 1 ATGTGACTTT TATTCATGTA ATTATATTAG GTTTATTACA AGCCAATTAT ATAACTCGAC 61 TACTTCAAGC AATTTAAAAG AAAGTGACTC AATTTTACTT AGCCTCTTCA TCACTTGAGG 121 GCATCTCCAA GGGGAAATTT GGGCTAGTAA CACCATTAGG ACAAAAAACA ACCCTATAAT 181 TTGTACTACC ACTAGGGCAA GTAAATGTGC TAGTAGGATC ATCTTGTGGG TAGCTATACG 241 CATCAGGACA TCTTTGTTTG AAAAATCTCG ACAAATCAGT AGGGCCACAT GGACCTTGTG 301 TGCAACAATA TTGTTGTCCT CCGAACGTGG TACAAGGATT GTTACATCCT CCGGGTACCC 361 TAAGTGAACC AGGACATTCA CCATTTATAT TAGCCGTACA ATGAATTGCA TGGCATTTCC 421 CTCCACTAGG ATTGGTCGGG GCGAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA 481 TGTCCCAGAA ATCTAGGTTG CTAAACTGGT CCAAGGCGTA CTCGGCCAGG GTGTTTGGTG 541 GTTTGCC Predicted gene structure (within gDNA segment 9400 to 2787): Exon 1 8541 8503 ( 39 n); cDNA 113 151 ( 39 n); score: 0.718 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0), Pa: 0.189 (s: 0.72) Exon 2 5349 4953 ( 397 n); cDNA 152 547 ( 396 n); score: 0.829 MATCH C08HBa0235H18.1- SGN-E354307- 0.829 436 0.797 C PGS_C08HBa0235H18.1-_SGN-E354307- (8541 8503,5349 4953) Alignment (genomic DNA sequence = upper lines): ACTTGTAGGC ATCTCCAATG GGAAATTTGT TGTTTCATTG TGAGTAGAGC CATAAGGACA 8482 ||||| ||| |||||||| | ||||||||| | | ACTTGAGGGC ATCTCCAAGG GGAAATTTGG GCTAGTAAC. .......... .......... 151 GAACATTATC TTGTAGTCTG TAGTCCAACT CTGACAAGTA AAAGTACTAG TTGGATCGTC 8422 .......... .......... .......... .......... .......... .......... 151 TTGAGGGTAA CTATAGGCAT CAGGACATCT TTGTTTGAAA AATCTTGACA ATTCAGTAGG 8362 .......... .......... .......... .......... .......... .......... 151 ACCACATGGA CCGTGATTAC AACAATATTG TTGTCCTCCG AATGTTGTAC AAGGGTTGTT 8302 .......... .......... .......... .......... .......... .......... 151 ACATCCTCCA GGTACCCTAA GTGAACCAGG GCATTCACCG TTTATATTGG CTGTGCATTG 8242 .......... .......... .......... .......... .......... .......... 151 AATTGGATGA CATTTTCCAG GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA 8182 .......... .......... .......... .......... .......... .......... 151 TCCATCAATA ACAGAAATAT CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC 8122 .......... .......... .......... .......... .......... .......... 151 AGCTAAGGTG TTTGGTGGTT TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC 8062 .......... .......... .......... .......... .......... .......... 151 AGTCTGGCAC CAACCTCTTC CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG 8002 .......... .......... .......... .......... .......... .......... 151 TGCCATTTTA GTGCCAGGTG GGGCCCAAAA CCACCAACTC TGACCTCTCT CGAGACGTCG 7942 .......... .......... .......... .......... .......... .......... 151 ACCACCTCCT ACGGGGACCG CTGCCGCCCA AACGGTGTAG GGGCAGTTGT TATGGACCTC 7882 .......... .......... .......... .......... .......... .......... 151 AAATACACCG GAACCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAAAACA CTAAACAAGT 7822 .......... .......... .......... .......... .......... .......... 151 TGTCAAGTGA CTCATTTTAG TATAAGAAGT TGTAGGATAT ATTTGCATAT CGAGCTAGGG 7762 .......... .......... .......... .......... .......... .......... 151 GTTTATATAG TGGTATGGCG GCTTTTTTTC ACTATGGACA TTAATCATAT AAATATTGGC 7702 .......... .......... .......... .......... .......... .......... 151 ACTTGTTATA AACATATATA GAAAATTAAA AAAAAAAATT GTATCCAAAA TATCTCCACT 7642 .......... .......... .......... .......... .......... .......... 151 TGAAAAAAAA AGCCGCCAAT ATAATATGAG TACAGCCTAT TATAAGTAAT ATATTTTGTT 7582 .......... .......... .......... .......... .......... .......... 151 CACTCCAGTC ATATTTCACA GTTCAACTTT TTGCTATTTT GAAAATTTAT GCATTAACAC 7522 .......... .......... .......... .......... .......... .......... 151 ATTATGATAT TTATAATGAT TAAAAAAAAA AGAGAAGATA TTTTTTAATT AAGTGATATA 7462 .......... .......... .......... .......... .......... .......... 151 TACGTATTAT TAGTTTTGTG TTTAACTATA TATTAATTTT AAATTATTTA GTTTAGTATA 7402 .......... .......... .......... .......... .......... .......... 151 TACAACAAAT CGGAAAAATG CATGGCAGGG CATGAAACCT AAAATTGTGG AAAATTTCCT 7342 .......... .......... .......... .......... .......... .......... 151 AATTTTTTTT GAACATTTTT TCATGAGAAA TTTAGTTAGT AGAGAATTCT CTTCATAATT 7282 .......... .......... .......... .......... .......... .......... 151 TTTATTGGTT ATGTTTTCAT AAATAAAATA ACTTAAAAAT TTTGAATTAC AAATTTGTAA 7222 .......... .......... .......... .......... .......... .......... 151 TTTTTGTTTA CAGACAATTG CCTTTTTTCC CTTGATTATT TTTTTCCGTC GTATATATAT 7162 .......... .......... .......... .......... .......... .......... 151 AGTGGATTTT TATATTAAAT TATTTATAGC ATATTTATCA AGTGGACATA ATAATTAATT 7102 .......... .......... .......... .......... .......... .......... 151 GAAAATGTGC ATGCATTCTA CAGTCAAAAA AGTTGAGCAA ATGGGTAGGC GTAGAGATGA 7042 .......... .......... .......... .......... .......... .......... 151 GTGGAACCTT AAAAGTTTGA ATTTTTTTTT TATTCGATAC AAGCTATGTA GGTCTTGTTT 6982 .......... .......... .......... .......... .......... .......... 151 CACACGAGAA AAATGAATTT TGAAATTAGT TATGAATTTC GTTACTAATC TATCTCTAAT 6922 .......... .......... .......... .......... .......... .......... 151 ATGCAAAGTT TTGAATAATC TATCCCTAAT TGGTTACTAG ATATAGAACT AGCAATGATT 6862 .......... .......... .......... .......... .......... .......... 151 TTTGTTATTG ATTGAATAAT TTGTTCGATA TTGATTTTTG TTTTATGTTT CCTCCGTCCG 6802 .......... .......... .......... .......... .......... .......... 151 ATATTGTTTG TTATGGTTTC TATTTATAGA CTCAAACTAT AAAAACTTTG ACTAACATTT 6742 .......... .......... .......... .......... .......... .......... 151 GAAGATACAT TTTTTTATCA TATTAATATG AAAAGATTGT AATTTATAGT ACTTTTCATA 6682 .......... .......... .......... .......... .......... .......... 151 TTGTTTTAGA ATATTTAATT TTTTTGGTTT AAAGTATCGA ATTAATGTGA TTTAATTTAC 6622 .......... .......... .......... .......... .......... .......... 151 CTTTAGAAAT CAATCAAAAT TGACTTTCGA TAAGCGTAAC ATGACAAATA TTTCTGGACG 6562 .......... .......... .......... .......... .......... .......... 151 GAGGGAGTAT TGATTTTTTA TCGTTGTCAT CATGGTCGTC TTTGTTTGTT GGTTCATAAT 6502 .......... .......... .......... .......... .......... .......... 151 AAGATATTCT TGAGTTTAAA TGAGATGATT GTATATTTGA GTTTAATTTT GGAACATGCA 6442 .......... .......... .......... .......... .......... .......... 151 AGAGTTTTTG GATTTGATTT TGATCGGTAG ATGTACTAGT ACCTGCCACC AAAACATCGT 6382 .......... .......... .......... .......... .......... .......... 151 GAAGGATTCA GTGAACGACT TGAAACTTAG TAACACAAGA CAATTCACTG AATGGTTGTT 6322 .......... .......... .......... .......... .......... .......... 151 GGCTCTACCG GAGGAGTCTG AAATCAACAA CGTGTAACTG CTTGGGCAGA ATAAAAGAAC 6262 .......... .......... .......... .......... .......... .......... 151 TTAAATTGTT TTAATAGAAT TTTTTAAGTA ACATTGCAAT TATTTAAGCA ATACGAACGC 6202 .......... .......... .......... .......... .......... .......... 151 CCAATTGTAT TTTATTTTAT TTTTTTATAA TAAAAGAGTT TTGGAAGTAA TGAATTTTAA 6142 .......... .......... .......... .......... .......... .......... 151 TACAATATCA ATATTTAAAT AATGTTGAAT TCTTAGCTTA GGCATTGAAT CGCAATTGAA 6082 .......... .......... .......... .......... .......... .......... 151 AGTGAAAGCC CTTTTTTGCT ATTTCAAGTT ATGAATTCAG ATACTAAAGG ATAACGTCTT 6022 .......... .......... .......... .......... .......... .......... 151 TTAGAAGGAA GATATTAATG GGGTAAGTGA TTTTTAAAAG TTGACTTTTA TATAAAATTA 5962 .......... .......... .......... .......... .......... .......... 151 TCTTCTTCTT TTTTCTTTTT CTTTTTTGTA TATCGACTCA TTTAATTATC AGTTTAACTT 5902 .......... .......... .......... .......... .......... .......... 151 AATGTTCGAA TCTTTAAGCT TTTTAATTAA TATTGAATTT ATTATTTCTT TAAACTTATA 5842 .......... .......... .......... .......... .......... .......... 151 AATTCAAATC TAAACACTTA TTAAAATTTT AATGAATTTT CATATACTAT AGTATACTTG 5782 .......... .......... .......... .......... .......... .......... 151 AAAATGTTCC AAAAGCCGCC AATAAAAAAA TATTTCCATC TGTTTGACTT ATATTATGAC 5722 .......... .......... .......... .......... .......... .......... 151 ATGTAACGAG TTGTCCCTAC AATTTTATAT TTTCAGATCT AGGTACTTTA ATATATTAAC 5662 .......... .......... .......... .......... .......... .......... 151 TAGACTAATT TTTTTTCATT ATAATTAAAA ATTTTAAGAA AAAAACTGTA CTCCAGATAT 5602 .......... .......... .......... .......... .......... .......... 151 AATTTCAATT TAAAATTAAA ATACCATATA TAAGACAAAG CATCGATCAT AGATTGTTAT 5542 .......... .......... .......... .......... .......... .......... 151 TCAGATCTTA GCCACTTCAA ACAAACAAAT GTAAAAGAAA TGTGTACAAG GCAAATTAAA 5482 .......... .......... .......... .......... .......... .......... 151 GACAATGTCC ATCTTCAAAA CAAATTTAAC AAAAAAGAGA TTGGCTCAAC TCAAGATTTC 5422 .......... .......... .......... .......... .......... .......... 151 TACTTAATTA AGCCACTTCA AGAGTATTTG TAGGAATCTC CAATGGGAAA TTTGTTGTTT 5362 .......... .......... .......... .......... .......... .......... 151 CATTGTGAGT AGAGCCATAA GGACAAAACA TAACCTTGTA GTCTGTAGTC CAACTCTGAC 5302 | |||| | |||||||| | |||| | || | |||| | | ||| | | .......... ..A-CCATTA GGACAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC 198 AAGTAAAAGT ACTTGTTGGA TCGTCTTGAG GATAACTATA GGCATCGGGA CATCTTTGTT 5242 ||||||| || || || ||| || ||||| | | || ||||| ||||| ||| |||||||||| AAGTAAATGT GCTAGTAGGA TCATCTTGTG GGTAGCTATA CGCATCAGGA CATCTTTGTT 258 TGAAAAATCT TGACAAATCG GTAGGACCAC ATGGACCTTG AGTGCAACAA TATTGTTGTC 5182 |||||||||| |||||||| ||||| |||| |||||||||| ||||||||| |||||||||| TGAAAAATCT CGACAAATCA GTAGGGCCAC ATGGACCTTG TGTGCAACAA TATTGTTGTC 318 CTCCGAATGT AGTACAAGGG TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGGCATT 5122 ||||||| || |||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CTCCGAACGT GGTACAAGGA TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGACATT 378 CACCGTTTAT ATTAGCAACA CATTGAATTG GATGACATTT TCCCGGCCCA GGGTTAGTTG 5062 |||| ||||| |||||| | || ||||||| ||| ||||| || | | || || || | CACCATTTAT ATTAGCCGTA CAATGAATTG CATGGCATTT CCCTCCACTA GGATTGGTCG 438 GGCCGAAAGA CATAGGGATG TTGAATCCAT CAATAACAGA AATGTCCCAG AAATCTAAGT 5002 || |||||| ||| || || || ||||||| | | | ||| |||||||||| ||||||| || GGGCGAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAG AAATCTAGGT 498 TGCTAAATTG ATTCAAAGCG TATTCAGCTA AGGTGTTTGG TGGTTTACC 4953 ||||||| || | ||| ||| || || || | ||||||||| |||||| || TGCTAAACTG GTCCAAGGCG TACTCGGCCA GGGTGTTTGG TGGTTTGCC 547 hqPGS_C08HBa0235H18.1-_SGN-E354307- (8541 8503,5349 4953) ******************************************************************************** EST sequence 393 -strand 563 n (File: SGN-E357558-) 1 TTTTTTTTTT GTGATGATGT GACTTTTATT CATGTAATTA TATTAGGTTT ATTACAAGCC 61 AATTATATAA CTCGACTACT TCAAGCAATT TAAAAGAAAG TGACTCAATT TTACTTAGCC 121 TCTTCATCAC TTGAGGGCAT CTCCAAGGGG AAATTTGGGC TAGTAACACC ATTAGGACAA 181 AAAACAACCC TATAATTTGT ACTACCACTA GGGCAAGTAA ATGTGCTAGT AGGATCATCT 241 TGTGGGTAGC TATACGCATC AGGACATCTT TGTTTGAAAA ATCTCGACAA ATCAGTAGGG 301 CCACATGGAC CTTGTGTGCA ACAATATTGT TGTCCTCCGA ACGTGGTACA AGGATTGTTA 361 CATCCTCCGG GTACCCTAAG TGAACCAGGA CATTCACCAT TTATATTAGC CGTACAATGA 421 ATTGCATGGC ATTTCCCTCC ACTAGGATTG GTCGGGGCGA AAGTCATTGG AATATTAAAT 481 CCATCGACTA AAGAAATGTC CCAGAAATCT AGGTTGCTAA ACTGGTCCAA GGCGTACTCG 541 GCCAGGGTGT TTGGTGGTTT GCC Predicted gene structure (within gDNA segment 9560 to 2787): Exon 1 8541 8503 ( 39 n); cDNA 129 167 ( 39 n); score: 0.718 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0), Pa: 0.189 (s: 0.72) Exon 2 5349 4953 ( 397 n); cDNA 168 563 ( 396 n); score: 0.829 PPA cDNA 12 1 MATCH C08HBa0235H18.1- SGN-E357558- 0.829 436 0.774 C PGS_C08HBa0235H18.1-_SGN-E357558- (8541 8503,5349 4953) Alignment (genomic DNA sequence = upper lines): ACTTGTAGGC ATCTCCAATG GGAAATTTGT TGTTTCATTG TGAGTAGAGC CATAAGGACA 8482 ||||| ||| |||||||| | ||||||||| | | ACTTGAGGGC ATCTCCAAGG GGAAATTTGG GCTAGTAAC. .......... .......... 167 GAACATTATC TTGTAGTCTG TAGTCCAACT CTGACAAGTA AAAGTACTAG TTGGATCGTC 8422 .......... .......... .......... .......... .......... .......... 167 TTGAGGGTAA CTATAGGCAT CAGGACATCT TTGTTTGAAA AATCTTGACA ATTCAGTAGG 8362 .......... .......... .......... .......... .......... .......... 167 ACCACATGGA CCGTGATTAC AACAATATTG TTGTCCTCCG AATGTTGTAC AAGGGTTGTT 8302 .......... .......... .......... .......... .......... .......... 167 ACATCCTCCA GGTACCCTAA GTGAACCAGG GCATTCACCG TTTATATTGG CTGTGCATTG 8242 .......... .......... .......... .......... .......... .......... 167 AATTGGATGA CATTTTCCAG GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA 8182 .......... .......... .......... .......... .......... .......... 167 TCCATCAATA ACAGAAATAT CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC 8122 .......... .......... .......... .......... .......... .......... 167 AGCTAAGGTG TTTGGTGGTT TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC 8062 .......... .......... .......... .......... .......... .......... 167 AGTCTGGCAC CAACCTCTTC CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG 8002 .......... .......... .......... .......... .......... .......... 167 TGCCATTTTA GTGCCAGGTG GGGCCCAAAA CCACCAACTC TGACCTCTCT CGAGACGTCG 7942 .......... .......... .......... .......... .......... .......... 167 ACCACCTCCT ACGGGGACCG CTGCCGCCCA AACGGTGTAG GGGCAGTTGT TATGGACCTC 7882 .......... .......... .......... .......... .......... .......... 167 AAATACACCG GAACCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAAAACA CTAAACAAGT 7822 .......... .......... .......... .......... .......... .......... 167 TGTCAAGTGA CTCATTTTAG TATAAGAAGT TGTAGGATAT ATTTGCATAT CGAGCTAGGG 7762 .......... .......... .......... .......... .......... .......... 167 GTTTATATAG TGGTATGGCG GCTTTTTTTC ACTATGGACA TTAATCATAT AAATATTGGC 7702 .......... .......... .......... .......... .......... .......... 167 ACTTGTTATA AACATATATA GAAAATTAAA AAAAAAAATT GTATCCAAAA TATCTCCACT 7642 .......... .......... .......... .......... .......... .......... 167 TGAAAAAAAA AGCCGCCAAT ATAATATGAG TACAGCCTAT TATAAGTAAT ATATTTTGTT 7582 .......... .......... .......... .......... .......... .......... 167 CACTCCAGTC ATATTTCACA GTTCAACTTT TTGCTATTTT GAAAATTTAT GCATTAACAC 7522 .......... .......... .......... .......... .......... .......... 167 ATTATGATAT TTATAATGAT TAAAAAAAAA AGAGAAGATA TTTTTTAATT AAGTGATATA 7462 .......... .......... .......... .......... .......... .......... 167 TACGTATTAT TAGTTTTGTG TTTAACTATA TATTAATTTT AAATTATTTA GTTTAGTATA 7402 .......... .......... .......... .......... .......... .......... 167 TACAACAAAT CGGAAAAATG CATGGCAGGG CATGAAACCT AAAATTGTGG AAAATTTCCT 7342 .......... .......... .......... .......... .......... .......... 167 AATTTTTTTT GAACATTTTT TCATGAGAAA TTTAGTTAGT AGAGAATTCT CTTCATAATT 7282 .......... .......... .......... .......... .......... .......... 167 TTTATTGGTT ATGTTTTCAT AAATAAAATA ACTTAAAAAT TTTGAATTAC AAATTTGTAA 7222 .......... .......... .......... .......... .......... .......... 167 TTTTTGTTTA CAGACAATTG CCTTTTTTCC CTTGATTATT TTTTTCCGTC GTATATATAT 7162 .......... .......... .......... .......... .......... .......... 167 AGTGGATTTT TATATTAAAT TATTTATAGC ATATTTATCA AGTGGACATA ATAATTAATT 7102 .......... .......... .......... .......... .......... .......... 167 GAAAATGTGC ATGCATTCTA CAGTCAAAAA AGTTGAGCAA ATGGGTAGGC GTAGAGATGA 7042 .......... .......... .......... .......... .......... .......... 167 GTGGAACCTT AAAAGTTTGA ATTTTTTTTT TATTCGATAC AAGCTATGTA GGTCTTGTTT 6982 .......... .......... .......... .......... .......... .......... 167 CACACGAGAA AAATGAATTT TGAAATTAGT TATGAATTTC GTTACTAATC TATCTCTAAT 6922 .......... .......... .......... .......... .......... .......... 167 ATGCAAAGTT TTGAATAATC TATCCCTAAT TGGTTACTAG ATATAGAACT AGCAATGATT 6862 .......... .......... .......... .......... .......... .......... 167 TTTGTTATTG ATTGAATAAT TTGTTCGATA TTGATTTTTG TTTTATGTTT CCTCCGTCCG 6802 .......... .......... .......... .......... .......... .......... 167 ATATTGTTTG TTATGGTTTC TATTTATAGA CTCAAACTAT AAAAACTTTG ACTAACATTT 6742 .......... .......... .......... .......... .......... .......... 167 GAAGATACAT TTTTTTATCA TATTAATATG AAAAGATTGT AATTTATAGT ACTTTTCATA 6682 .......... .......... .......... .......... .......... .......... 167 TTGTTTTAGA ATATTTAATT TTTTTGGTTT AAAGTATCGA ATTAATGTGA TTTAATTTAC 6622 .......... .......... .......... .......... .......... .......... 167 CTTTAGAAAT CAATCAAAAT TGACTTTCGA TAAGCGTAAC ATGACAAATA TTTCTGGACG 6562 .......... .......... .......... .......... .......... .......... 167 GAGGGAGTAT TGATTTTTTA TCGTTGTCAT CATGGTCGTC TTTGTTTGTT GGTTCATAAT 6502 .......... .......... .......... .......... .......... .......... 167 AAGATATTCT TGAGTTTAAA TGAGATGATT GTATATTTGA GTTTAATTTT GGAACATGCA 6442 .......... .......... .......... .......... .......... .......... 167 AGAGTTTTTG GATTTGATTT TGATCGGTAG ATGTACTAGT ACCTGCCACC AAAACATCGT 6382 .......... .......... .......... .......... .......... .......... 167 GAAGGATTCA GTGAACGACT TGAAACTTAG TAACACAAGA CAATTCACTG AATGGTTGTT 6322 .......... .......... .......... .......... .......... .......... 167 GGCTCTACCG GAGGAGTCTG AAATCAACAA CGTGTAACTG CTTGGGCAGA ATAAAAGAAC 6262 .......... .......... .......... .......... .......... .......... 167 TTAAATTGTT TTAATAGAAT TTTTTAAGTA ACATTGCAAT TATTTAAGCA ATACGAACGC 6202 .......... .......... .......... .......... .......... .......... 167 CCAATTGTAT TTTATTTTAT TTTTTTATAA TAAAAGAGTT TTGGAAGTAA TGAATTTTAA 6142 .......... .......... .......... .......... .......... .......... 167 TACAATATCA ATATTTAAAT AATGTTGAAT TCTTAGCTTA GGCATTGAAT CGCAATTGAA 6082 .......... .......... .......... .......... .......... .......... 167 AGTGAAAGCC CTTTTTTGCT ATTTCAAGTT ATGAATTCAG ATACTAAAGG ATAACGTCTT 6022 .......... .......... .......... .......... .......... .......... 167 TTAGAAGGAA GATATTAATG GGGTAAGTGA TTTTTAAAAG TTGACTTTTA TATAAAATTA 5962 .......... .......... .......... .......... .......... .......... 167 TCTTCTTCTT TTTTCTTTTT CTTTTTTGTA TATCGACTCA TTTAATTATC AGTTTAACTT 5902 .......... .......... .......... .......... .......... .......... 167 AATGTTCGAA TCTTTAAGCT TTTTAATTAA TATTGAATTT ATTATTTCTT TAAACTTATA 5842 .......... .......... .......... .......... .......... .......... 167 AATTCAAATC TAAACACTTA TTAAAATTTT AATGAATTTT CATATACTAT AGTATACTTG 5782 .......... .......... .......... .......... .......... .......... 167 AAAATGTTCC AAAAGCCGCC AATAAAAAAA TATTTCCATC TGTTTGACTT ATATTATGAC 5722 .......... .......... .......... .......... .......... .......... 167 ATGTAACGAG TTGTCCCTAC AATTTTATAT TTTCAGATCT AGGTACTTTA ATATATTAAC 5662 .......... .......... .......... .......... .......... .......... 167 TAGACTAATT TTTTTTCATT ATAATTAAAA ATTTTAAGAA AAAAACTGTA CTCCAGATAT 5602 .......... .......... .......... .......... .......... .......... 167 AATTTCAATT TAAAATTAAA ATACCATATA TAAGACAAAG CATCGATCAT AGATTGTTAT 5542 .......... .......... .......... .......... .......... .......... 167 TCAGATCTTA GCCACTTCAA ACAAACAAAT GTAAAAGAAA TGTGTACAAG GCAAATTAAA 5482 .......... .......... .......... .......... .......... .......... 167 GACAATGTCC ATCTTCAAAA CAAATTTAAC AAAAAAGAGA TTGGCTCAAC TCAAGATTTC 5422 .......... .......... .......... .......... .......... .......... 167 TACTTAATTA AGCCACTTCA AGAGTATTTG TAGGAATCTC CAATGGGAAA TTTGTTGTTT 5362 .......... .......... .......... .......... .......... .......... 167 CATTGTGAGT AGAGCCATAA GGACAAAACA TAACCTTGTA GTCTGTAGTC CAACTCTGAC 5302 | |||| | |||||||| | |||| | || | |||| | | ||| | | .......... ..A-CCATTA GGACAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC 214 AAGTAAAAGT ACTTGTTGGA TCGTCTTGAG GATAACTATA GGCATCGGGA CATCTTTGTT 5242 ||||||| || || || ||| || ||||| | | || ||||| ||||| ||| |||||||||| AAGTAAATGT GCTAGTAGGA TCATCTTGTG GGTAGCTATA CGCATCAGGA CATCTTTGTT 274 TGAAAAATCT TGACAAATCG GTAGGACCAC ATGGACCTTG AGTGCAACAA TATTGTTGTC 5182 |||||||||| |||||||| ||||| |||| |||||||||| ||||||||| |||||||||| TGAAAAATCT CGACAAATCA GTAGGGCCAC ATGGACCTTG TGTGCAACAA TATTGTTGTC 334 CTCCGAATGT AGTACAAGGG TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGGCATT 5122 ||||||| || |||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CTCCGAACGT GGTACAAGGA TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGACATT 394 CACCGTTTAT ATTAGCAACA CATTGAATTG GATGACATTT TCCCGGCCCA GGGTTAGTTG 5062 |||| ||||| |||||| | || ||||||| ||| ||||| || | | || || || | CACCATTTAT ATTAGCCGTA CAATGAATTG CATGGCATTT CCCTCCACTA GGATTGGTCG 454 GGCCGAAAGA CATAGGGATG TTGAATCCAT CAATAACAGA AATGTCCCAG AAATCTAAGT 5002 || |||||| ||| || || || ||||||| | | | ||| |||||||||| ||||||| || GGGCGAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAG AAATCTAGGT 514 TGCTAAATTG ATTCAAAGCG TATTCAGCTA AGGTGTTTGG TGGTTTACC 4953 ||||||| || | ||| ||| || || || | ||||||||| |||||| || TGCTAAACTG GTCCAAGGCG TACTCGGCCA GGGTGTTTGG TGGTTTGCC 563 hqPGS_C08HBa0235H18.1-_SGN-E357558- (8541 8503,5349 4953) ******************************************************************************** EST sequence 416 -strand 563 n (File: SGN-E357673-) 1 TTTTTTTTTT GTGATGATGT GACTTTTATT CATGTAATTA TATTAGGTTT ATTACAAGCC 61 AATTATATAA CTCGACTACT TCAAGCAATT TAAAAGAAAG TGACTCAATT TTACTTAGCC 121 TCTTCATCAC TTGAGGGCAT CTCCAAGGGG AAATTTGGGC TAGTAACACC ATTAGGACAA 181 AAAACAACCC TATAATTTGT ACTACCACTA GGGCAAGTAA ATGTGCTAGT AGGATCATCT 241 TGTGGGTAGC TATACGCATC AGGACATCTT TGTTTGAAAA ATCTCGACAA ATCAGTAGGG 301 CCACATGGAC CTTGTGTGCA ACAATATTGT TGTCCTCCGA ACGTGGTACA AGGATTGTTA 361 CATCCTCCGG GTACCCTAAG TGAACCAGGA CATTCACCAT TTATATTAGC CGTACAATGA 421 ATTGCATGGC ATTTCCCTCC ACTAGGATTG GTCGGGGCGA AAGTCATTGG AATATTAAAT 481 CCATCGACTA AAGAAATGTC CCAGAAATCT AGGTTGCTAA ACTGGTCCAA GGCGTACTCG 541 GCCAGGGTGT TTGGTGGTTT GCC Predicted gene structure (within gDNA segment 9560 to 2787): Exon 1 8541 8503 ( 39 n); cDNA 129 167 ( 39 n); score: 0.718 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0), Pa: 0.189 (s: 0.72) Exon 2 5349 4953 ( 397 n); cDNA 168 563 ( 396 n); score: 0.829 PPA cDNA 12 1 MATCH C08HBa0235H18.1- SGN-E357673- 0.829 436 0.774 C PGS_C08HBa0235H18.1-_SGN-E357673- (8541 8503,5349 4953) Alignment (genomic DNA sequence = upper lines): ACTTGTAGGC ATCTCCAATG GGAAATTTGT TGTTTCATTG TGAGTAGAGC CATAAGGACA 8482 ||||| ||| |||||||| | ||||||||| | | ACTTGAGGGC ATCTCCAAGG GGAAATTTGG GCTAGTAAC. .......... .......... 167 GAACATTATC TTGTAGTCTG TAGTCCAACT CTGACAAGTA AAAGTACTAG TTGGATCGTC 8422 .......... .......... .......... .......... .......... .......... 167 TTGAGGGTAA CTATAGGCAT CAGGACATCT TTGTTTGAAA AATCTTGACA ATTCAGTAGG 8362 .......... .......... .......... .......... .......... .......... 167 ACCACATGGA CCGTGATTAC AACAATATTG TTGTCCTCCG AATGTTGTAC AAGGGTTGTT 8302 .......... .......... .......... .......... .......... .......... 167 ACATCCTCCA GGTACCCTAA GTGAACCAGG GCATTCACCG TTTATATTGG CTGTGCATTG 8242 .......... .......... .......... .......... .......... .......... 167 AATTGGATGA CATTTTCCAG GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA 8182 .......... .......... .......... .......... .......... .......... 167 TCCATCAATA ACAGAAATAT CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC 8122 .......... .......... .......... .......... .......... .......... 167 AGCTAAGGTG TTTGGTGGTT TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC 8062 .......... .......... .......... .......... .......... .......... 167 AGTCTGGCAC CAACCTCTTC CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG 8002 .......... .......... .......... .......... .......... .......... 167 TGCCATTTTA GTGCCAGGTG GGGCCCAAAA CCACCAACTC TGACCTCTCT CGAGACGTCG 7942 .......... .......... .......... .......... .......... .......... 167 ACCACCTCCT ACGGGGACCG CTGCCGCCCA AACGGTGTAG GGGCAGTTGT TATGGACCTC 7882 .......... .......... .......... .......... .......... .......... 167 AAATACACCG GAACCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAAAACA CTAAACAAGT 7822 .......... .......... .......... .......... .......... .......... 167 TGTCAAGTGA CTCATTTTAG TATAAGAAGT TGTAGGATAT ATTTGCATAT CGAGCTAGGG 7762 .......... .......... .......... .......... .......... .......... 167 GTTTATATAG TGGTATGGCG GCTTTTTTTC ACTATGGACA TTAATCATAT AAATATTGGC 7702 .......... .......... .......... .......... .......... .......... 167 ACTTGTTATA AACATATATA GAAAATTAAA AAAAAAAATT GTATCCAAAA TATCTCCACT 7642 .......... .......... .......... .......... .......... .......... 167 TGAAAAAAAA AGCCGCCAAT ATAATATGAG TACAGCCTAT TATAAGTAAT ATATTTTGTT 7582 .......... .......... .......... .......... .......... .......... 167 CACTCCAGTC ATATTTCACA GTTCAACTTT TTGCTATTTT GAAAATTTAT GCATTAACAC 7522 .......... .......... .......... .......... .......... .......... 167 ATTATGATAT TTATAATGAT TAAAAAAAAA AGAGAAGATA TTTTTTAATT AAGTGATATA 7462 .......... .......... .......... .......... .......... .......... 167 TACGTATTAT TAGTTTTGTG TTTAACTATA TATTAATTTT AAATTATTTA GTTTAGTATA 7402 .......... .......... .......... .......... .......... .......... 167 TACAACAAAT CGGAAAAATG CATGGCAGGG CATGAAACCT AAAATTGTGG AAAATTTCCT 7342 .......... .......... .......... .......... .......... .......... 167 AATTTTTTTT GAACATTTTT TCATGAGAAA TTTAGTTAGT AGAGAATTCT CTTCATAATT 7282 .......... .......... .......... .......... .......... .......... 167 TTTATTGGTT ATGTTTTCAT AAATAAAATA ACTTAAAAAT TTTGAATTAC AAATTTGTAA 7222 .......... .......... .......... .......... .......... .......... 167 TTTTTGTTTA CAGACAATTG CCTTTTTTCC CTTGATTATT TTTTTCCGTC GTATATATAT 7162 .......... .......... .......... .......... .......... .......... 167 AGTGGATTTT TATATTAAAT TATTTATAGC ATATTTATCA AGTGGACATA ATAATTAATT 7102 .......... .......... .......... .......... .......... .......... 167 GAAAATGTGC ATGCATTCTA CAGTCAAAAA AGTTGAGCAA ATGGGTAGGC GTAGAGATGA 7042 .......... .......... .......... .......... .......... .......... 167 GTGGAACCTT AAAAGTTTGA ATTTTTTTTT TATTCGATAC AAGCTATGTA GGTCTTGTTT 6982 .......... .......... .......... .......... .......... .......... 167 CACACGAGAA AAATGAATTT TGAAATTAGT TATGAATTTC GTTACTAATC TATCTCTAAT 6922 .......... .......... .......... .......... .......... .......... 167 ATGCAAAGTT TTGAATAATC TATCCCTAAT TGGTTACTAG ATATAGAACT AGCAATGATT 6862 .......... .......... .......... .......... .......... .......... 167 TTTGTTATTG ATTGAATAAT TTGTTCGATA TTGATTTTTG TTTTATGTTT CCTCCGTCCG 6802 .......... .......... .......... .......... .......... .......... 167 ATATTGTTTG TTATGGTTTC TATTTATAGA CTCAAACTAT AAAAACTTTG ACTAACATTT 6742 .......... .......... .......... .......... .......... .......... 167 GAAGATACAT TTTTTTATCA TATTAATATG AAAAGATTGT AATTTATAGT ACTTTTCATA 6682 .......... .......... .......... .......... .......... .......... 167 TTGTTTTAGA ATATTTAATT TTTTTGGTTT AAAGTATCGA ATTAATGTGA TTTAATTTAC 6622 .......... .......... .......... .......... .......... .......... 167 CTTTAGAAAT CAATCAAAAT TGACTTTCGA TAAGCGTAAC ATGACAAATA TTTCTGGACG 6562 .......... .......... .......... .......... .......... .......... 167 GAGGGAGTAT TGATTTTTTA TCGTTGTCAT CATGGTCGTC TTTGTTTGTT GGTTCATAAT 6502 .......... .......... .......... .......... .......... .......... 167 AAGATATTCT TGAGTTTAAA TGAGATGATT GTATATTTGA GTTTAATTTT GGAACATGCA 6442 .......... .......... .......... .......... .......... .......... 167 AGAGTTTTTG GATTTGATTT TGATCGGTAG ATGTACTAGT ACCTGCCACC AAAACATCGT 6382 .......... .......... .......... .......... .......... .......... 167 GAAGGATTCA GTGAACGACT TGAAACTTAG TAACACAAGA CAATTCACTG AATGGTTGTT 6322 .......... .......... .......... .......... .......... .......... 167 GGCTCTACCG GAGGAGTCTG AAATCAACAA CGTGTAACTG CTTGGGCAGA ATAAAAGAAC 6262 .......... .......... .......... .......... .......... .......... 167 TTAAATTGTT TTAATAGAAT TTTTTAAGTA ACATTGCAAT TATTTAAGCA ATACGAACGC 6202 .......... .......... .......... .......... .......... .......... 167 CCAATTGTAT TTTATTTTAT TTTTTTATAA TAAAAGAGTT TTGGAAGTAA TGAATTTTAA 6142 .......... .......... .......... .......... .......... .......... 167 TACAATATCA ATATTTAAAT AATGTTGAAT TCTTAGCTTA GGCATTGAAT CGCAATTGAA 6082 .......... .......... .......... .......... .......... .......... 167 AGTGAAAGCC CTTTTTTGCT ATTTCAAGTT ATGAATTCAG ATACTAAAGG ATAACGTCTT 6022 .......... .......... .......... .......... .......... .......... 167 TTAGAAGGAA GATATTAATG GGGTAAGTGA TTTTTAAAAG TTGACTTTTA TATAAAATTA 5962 .......... .......... .......... .......... .......... .......... 167 TCTTCTTCTT TTTTCTTTTT CTTTTTTGTA TATCGACTCA TTTAATTATC AGTTTAACTT 5902 .......... .......... .......... .......... .......... .......... 167 AATGTTCGAA TCTTTAAGCT TTTTAATTAA TATTGAATTT ATTATTTCTT TAAACTTATA 5842 .......... .......... .......... .......... .......... .......... 167 AATTCAAATC TAAACACTTA TTAAAATTTT AATGAATTTT CATATACTAT AGTATACTTG 5782 .......... .......... .......... .......... .......... .......... 167 AAAATGTTCC AAAAGCCGCC AATAAAAAAA TATTTCCATC TGTTTGACTT ATATTATGAC 5722 .......... .......... .......... .......... .......... .......... 167 ATGTAACGAG TTGTCCCTAC AATTTTATAT TTTCAGATCT AGGTACTTTA ATATATTAAC 5662 .......... .......... .......... .......... .......... .......... 167 TAGACTAATT TTTTTTCATT ATAATTAAAA ATTTTAAGAA AAAAACTGTA CTCCAGATAT 5602 .......... .......... .......... .......... .......... .......... 167 AATTTCAATT TAAAATTAAA ATACCATATA TAAGACAAAG CATCGATCAT AGATTGTTAT 5542 .......... .......... .......... .......... .......... .......... 167 TCAGATCTTA GCCACTTCAA ACAAACAAAT GTAAAAGAAA TGTGTACAAG GCAAATTAAA 5482 .......... .......... .......... .......... .......... .......... 167 GACAATGTCC ATCTTCAAAA CAAATTTAAC AAAAAAGAGA TTGGCTCAAC TCAAGATTTC 5422 .......... .......... .......... .......... .......... .......... 167 TACTTAATTA AGCCACTTCA AGAGTATTTG TAGGAATCTC CAATGGGAAA TTTGTTGTTT 5362 .......... .......... .......... .......... .......... .......... 167 CATTGTGAGT AGAGCCATAA GGACAAAACA TAACCTTGTA GTCTGTAGTC CAACTCTGAC 5302 | |||| | |||||||| | |||| | || | |||| | | ||| | | .......... ..A-CCATTA GGACAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC 214 AAGTAAAAGT ACTTGTTGGA TCGTCTTGAG GATAACTATA GGCATCGGGA CATCTTTGTT 5242 ||||||| || || || ||| || ||||| | | || ||||| ||||| ||| |||||||||| AAGTAAATGT GCTAGTAGGA TCATCTTGTG GGTAGCTATA CGCATCAGGA CATCTTTGTT 274 TGAAAAATCT TGACAAATCG GTAGGACCAC ATGGACCTTG AGTGCAACAA TATTGTTGTC 5182 |||||||||| |||||||| ||||| |||| |||||||||| ||||||||| |||||||||| TGAAAAATCT CGACAAATCA GTAGGGCCAC ATGGACCTTG TGTGCAACAA TATTGTTGTC 334 CTCCGAATGT AGTACAAGGG TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGGCATT 5122 ||||||| || |||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CTCCGAACGT GGTACAAGGA TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGACATT 394 CACCGTTTAT ATTAGCAACA CATTGAATTG GATGACATTT TCCCGGCCCA GGGTTAGTTG 5062 |||| ||||| |||||| | || ||||||| ||| ||||| || | | || || || | CACCATTTAT ATTAGCCGTA CAATGAATTG CATGGCATTT CCCTCCACTA GGATTGGTCG 454 GGCCGAAAGA CATAGGGATG TTGAATCCAT CAATAACAGA AATGTCCCAG AAATCTAAGT 5002 || |||||| ||| || || || ||||||| | | | ||| |||||||||| ||||||| || GGGCGAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAG AAATCTAGGT 514 TGCTAAATTG ATTCAAAGCG TATTCAGCTA AGGTGTTTGG TGGTTTACC 4953 ||||||| || | ||| ||| || || || | ||||||||| |||||| || TGCTAAACTG GTCCAAGGCG TACTCGGCCA GGGTGTTTGG TGGTTTGCC 563 hqPGS_C08HBa0235H18.1-_SGN-E357673- (8541 8503,5349 4953) ******************************************************************************** EST sequence 286 -strand 558 n (File: SGN-E353160-) 1 TTTTTTTGTG ATGATGTGAC TTTTATTCAT GTAATTATAT TAGGTTTATT ACAAGCCAAT 61 TATATAAACT CGACTACTTC AAGCAATTAA AAAGAAAGTG ACTCAATTTT ACTTAGCCTC 121 TTCATCACTT GAGGGCATCT CCAAGGGGAA ATTTGGGCTA GTAACACCAT TAGGACAAAA 181 AACAACCCTA TAATTTGTAC TACCACTAGG GCAAGTAAAT GTGCTAGTAG GATCATCTTG 241 TGGGTAGCTA TACGCATCAG GACATCTTTG TTTGAAAAAT CTCGACAAAT CAGTAGGGCC 301 ACATGGACCT TGTGTGCAAC AATATTGTTG TCCTCCGAAC GTGGTACAAG GATTGTTACA 361 TCCTCCGGGT ACCCTAAGTG AACCAGGACA TTCACCATTT ATATTAGCCG TACAATGAAT 421 TGCATGGCAT TTCCCTCCAC TAGGATTGGT CGGGGCGAAA GTCATTGGAA TATTAAATCC 481 ATCGACTAAA GAAATGTCCC AGAAATCTAG GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 541 CAGGGTGTTT GGTGGTTT Predicted gene structure (within gDNA segment 9540 to 2817): Exon 1 8541 8503 ( 39 n); cDNA 127 165 ( 39 n); score: 0.718 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0), Pa: 0.189 (s: 0.72) Exon 2 5349 4956 ( 394 n); cDNA 166 558 ( 393 n); score: 0.830 MATCH C08HBa0235H18.1- SGN-E353160- 0.830 433 0.776 C PGS_C08HBa0235H18.1-_SGN-E353160- (8541 8503,5349 4956) Alignment (genomic DNA sequence = upper lines): ACTTGTAGGC ATCTCCAATG GGAAATTTGT TGTTTCATTG TGAGTAGAGC CATAAGGACA 8482 ||||| ||| |||||||| | ||||||||| | | ACTTGAGGGC ATCTCCAAGG GGAAATTTGG GCTAGTAAC. .......... .......... 165 GAACATTATC TTGTAGTCTG TAGTCCAACT CTGACAAGTA AAAGTACTAG TTGGATCGTC 8422 .......... .......... .......... .......... .......... .......... 165 TTGAGGGTAA CTATAGGCAT CAGGACATCT TTGTTTGAAA AATCTTGACA ATTCAGTAGG 8362 .......... .......... .......... .......... .......... .......... 165 ACCACATGGA CCGTGATTAC AACAATATTG TTGTCCTCCG AATGTTGTAC AAGGGTTGTT 8302 .......... .......... .......... .......... .......... .......... 165 ACATCCTCCA GGTACCCTAA GTGAACCAGG GCATTCACCG TTTATATTGG CTGTGCATTG 8242 .......... .......... .......... .......... .......... .......... 165 AATTGGATGA CATTTTCCAG GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA 8182 .......... .......... .......... .......... .......... .......... 165 TCCATCAATA ACAGAAATAT CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC 8122 .......... .......... .......... .......... .......... .......... 165 AGCTAAGGTG TTTGGTGGTT TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC 8062 .......... .......... .......... .......... .......... .......... 165 AGTCTGGCAC CAACCTCTTC CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG 8002 .......... .......... .......... .......... .......... .......... 165 TGCCATTTTA GTGCCAGGTG GGGCCCAAAA CCACCAACTC TGACCTCTCT CGAGACGTCG 7942 .......... .......... .......... .......... .......... .......... 165 ACCACCTCCT ACGGGGACCG CTGCCGCCCA AACGGTGTAG GGGCAGTTGT TATGGACCTC 7882 .......... .......... .......... .......... .......... .......... 165 AAATACACCG GAACCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAAAACA CTAAACAAGT 7822 .......... .......... .......... .......... .......... .......... 165 TGTCAAGTGA CTCATTTTAG TATAAGAAGT TGTAGGATAT ATTTGCATAT CGAGCTAGGG 7762 .......... .......... .......... .......... .......... .......... 165 GTTTATATAG TGGTATGGCG GCTTTTTTTC ACTATGGACA TTAATCATAT AAATATTGGC 7702 .......... .......... .......... .......... .......... .......... 165 ACTTGTTATA AACATATATA GAAAATTAAA AAAAAAAATT GTATCCAAAA TATCTCCACT 7642 .......... .......... .......... .......... .......... .......... 165 TGAAAAAAAA AGCCGCCAAT ATAATATGAG TACAGCCTAT TATAAGTAAT ATATTTTGTT 7582 .......... .......... .......... .......... .......... .......... 165 CACTCCAGTC ATATTTCACA GTTCAACTTT TTGCTATTTT GAAAATTTAT GCATTAACAC 7522 .......... .......... .......... .......... .......... .......... 165 ATTATGATAT TTATAATGAT TAAAAAAAAA AGAGAAGATA TTTTTTAATT AAGTGATATA 7462 .......... .......... .......... .......... .......... .......... 165 TACGTATTAT TAGTTTTGTG TTTAACTATA TATTAATTTT AAATTATTTA GTTTAGTATA 7402 .......... .......... .......... .......... .......... .......... 165 TACAACAAAT CGGAAAAATG CATGGCAGGG CATGAAACCT AAAATTGTGG AAAATTTCCT 7342 .......... .......... .......... .......... .......... .......... 165 AATTTTTTTT GAACATTTTT TCATGAGAAA TTTAGTTAGT AGAGAATTCT CTTCATAATT 7282 .......... .......... .......... .......... .......... .......... 165 TTTATTGGTT ATGTTTTCAT AAATAAAATA ACTTAAAAAT TTTGAATTAC AAATTTGTAA 7222 .......... .......... .......... .......... .......... .......... 165 TTTTTGTTTA CAGACAATTG CCTTTTTTCC CTTGATTATT TTTTTCCGTC GTATATATAT 7162 .......... .......... .......... .......... .......... .......... 165 AGTGGATTTT TATATTAAAT TATTTATAGC ATATTTATCA AGTGGACATA ATAATTAATT 7102 .......... .......... .......... .......... .......... .......... 165 GAAAATGTGC ATGCATTCTA CAGTCAAAAA AGTTGAGCAA ATGGGTAGGC GTAGAGATGA 7042 .......... .......... .......... .......... .......... .......... 165 GTGGAACCTT AAAAGTTTGA ATTTTTTTTT TATTCGATAC AAGCTATGTA GGTCTTGTTT 6982 .......... .......... .......... .......... .......... .......... 165 CACACGAGAA AAATGAATTT TGAAATTAGT TATGAATTTC GTTACTAATC TATCTCTAAT 6922 .......... .......... .......... .......... .......... .......... 165 ATGCAAAGTT TTGAATAATC TATCCCTAAT TGGTTACTAG ATATAGAACT AGCAATGATT 6862 .......... .......... .......... .......... .......... .......... 165 TTTGTTATTG ATTGAATAAT TTGTTCGATA TTGATTTTTG TTTTATGTTT CCTCCGTCCG 6802 .......... .......... .......... .......... .......... .......... 165 ATATTGTTTG TTATGGTTTC TATTTATAGA CTCAAACTAT AAAAACTTTG ACTAACATTT 6742 .......... .......... .......... .......... .......... .......... 165 GAAGATACAT TTTTTTATCA TATTAATATG AAAAGATTGT AATTTATAGT ACTTTTCATA 6682 .......... .......... .......... .......... .......... .......... 165 TTGTTTTAGA ATATTTAATT TTTTTGGTTT AAAGTATCGA ATTAATGTGA TTTAATTTAC 6622 .......... .......... .......... .......... .......... .......... 165 CTTTAGAAAT CAATCAAAAT TGACTTTCGA TAAGCGTAAC ATGACAAATA TTTCTGGACG 6562 .......... .......... .......... .......... .......... .......... 165 GAGGGAGTAT TGATTTTTTA TCGTTGTCAT CATGGTCGTC TTTGTTTGTT GGTTCATAAT 6502 .......... .......... .......... .......... .......... .......... 165 AAGATATTCT TGAGTTTAAA TGAGATGATT GTATATTTGA GTTTAATTTT GGAACATGCA 6442 .......... .......... .......... .......... .......... .......... 165 AGAGTTTTTG GATTTGATTT TGATCGGTAG ATGTACTAGT ACCTGCCACC AAAACATCGT 6382 .......... .......... .......... .......... .......... .......... 165 GAAGGATTCA GTGAACGACT TGAAACTTAG TAACACAAGA CAATTCACTG AATGGTTGTT 6322 .......... .......... .......... .......... .......... .......... 165 GGCTCTACCG GAGGAGTCTG AAATCAACAA CGTGTAACTG CTTGGGCAGA ATAAAAGAAC 6262 .......... .......... .......... .......... .......... .......... 165 TTAAATTGTT TTAATAGAAT TTTTTAAGTA ACATTGCAAT TATTTAAGCA ATACGAACGC 6202 .......... .......... .......... .......... .......... .......... 165 CCAATTGTAT TTTATTTTAT TTTTTTATAA TAAAAGAGTT TTGGAAGTAA TGAATTTTAA 6142 .......... .......... .......... .......... .......... .......... 165 TACAATATCA ATATTTAAAT AATGTTGAAT TCTTAGCTTA GGCATTGAAT CGCAATTGAA 6082 .......... .......... .......... .......... .......... .......... 165 AGTGAAAGCC CTTTTTTGCT ATTTCAAGTT ATGAATTCAG ATACTAAAGG ATAACGTCTT 6022 .......... .......... .......... .......... .......... .......... 165 TTAGAAGGAA GATATTAATG GGGTAAGTGA TTTTTAAAAG TTGACTTTTA TATAAAATTA 5962 .......... .......... .......... .......... .......... .......... 165 TCTTCTTCTT TTTTCTTTTT CTTTTTTGTA TATCGACTCA TTTAATTATC AGTTTAACTT 5902 .......... .......... .......... .......... .......... .......... 165 AATGTTCGAA TCTTTAAGCT TTTTAATTAA TATTGAATTT ATTATTTCTT TAAACTTATA 5842 .......... .......... .......... .......... .......... .......... 165 AATTCAAATC TAAACACTTA TTAAAATTTT AATGAATTTT CATATACTAT AGTATACTTG 5782 .......... .......... .......... .......... .......... .......... 165 AAAATGTTCC AAAAGCCGCC AATAAAAAAA TATTTCCATC TGTTTGACTT ATATTATGAC 5722 .......... .......... .......... .......... .......... .......... 165 ATGTAACGAG TTGTCCCTAC AATTTTATAT TTTCAGATCT AGGTACTTTA ATATATTAAC 5662 .......... .......... .......... .......... .......... .......... 165 TAGACTAATT TTTTTTCATT ATAATTAAAA ATTTTAAGAA AAAAACTGTA CTCCAGATAT 5602 .......... .......... .......... .......... .......... .......... 165 AATTTCAATT TAAAATTAAA ATACCATATA TAAGACAAAG CATCGATCAT AGATTGTTAT 5542 .......... .......... .......... .......... .......... .......... 165 TCAGATCTTA GCCACTTCAA ACAAACAAAT GTAAAAGAAA TGTGTACAAG GCAAATTAAA 5482 .......... .......... .......... .......... .......... .......... 165 GACAATGTCC ATCTTCAAAA CAAATTTAAC AAAAAAGAGA TTGGCTCAAC TCAAGATTTC 5422 .......... .......... .......... .......... .......... .......... 165 TACTTAATTA AGCCACTTCA AGAGTATTTG TAGGAATCTC CAATGGGAAA TTTGTTGTTT 5362 .......... .......... .......... .......... .......... .......... 165 CATTGTGAGT AGAGCCATAA GGACAAAACA TAACCTTGTA GTCTGTAGTC CAACTCTGAC 5302 | |||| | |||||||| | |||| | || | |||| | | ||| | | .......... ..A-CCATTA GGACAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC 212 AAGTAAAAGT ACTTGTTGGA TCGTCTTGAG GATAACTATA GGCATCGGGA CATCTTTGTT 5242 ||||||| || || || ||| || ||||| | | || ||||| ||||| ||| |||||||||| AAGTAAATGT GCTAGTAGGA TCATCTTGTG GGTAGCTATA CGCATCAGGA CATCTTTGTT 272 TGAAAAATCT TGACAAATCG GTAGGACCAC ATGGACCTTG AGTGCAACAA TATTGTTGTC 5182 |||||||||| |||||||| ||||| |||| |||||||||| ||||||||| |||||||||| TGAAAAATCT CGACAAATCA GTAGGGCCAC ATGGACCTTG TGTGCAACAA TATTGTTGTC 332 CTCCGAATGT AGTACAAGGG TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGGCATT 5122 ||||||| || |||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CTCCGAACGT GGTACAAGGA TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGACATT 392 CACCGTTTAT ATTAGCAACA CATTGAATTG GATGACATTT TCCCGGCCCA GGGTTAGTTG 5062 |||| ||||| |||||| | || ||||||| ||| ||||| || | | || || || | CACCATTTAT ATTAGCCGTA CAATGAATTG CATGGCATTT CCCTCCACTA GGATTGGTCG 452 GGCCGAAAGA CATAGGGATG TTGAATCCAT CAATAACAGA AATGTCCCAG AAATCTAAGT 5002 || |||||| ||| || || || ||||||| | | | ||| |||||||||| ||||||| || GGGCGAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAG AAATCTAGGT 512 TGCTAAATTG ATTCAAAGCG TATTCAGCTA AGGTGTTTGG TGGTTT 4956 ||||||| || | ||| ||| || || || | ||||||||| |||||| TGCTAAACTG GTCCAAGGCG TACTCGGCCA GGGTGTTTGG TGGTTT 558 hqPGS_C08HBa0235H18.1-_SGN-E353160- (8541 8503,5349 4956) ******************************************************************************** EST sequence 424 -strand 561 n (File: SGN-E355505-) 1 TTTTTTTTTT TGTGATGATG TGACTTTTAT TCATGTAATT ATATTAGGTT TATTACAAGC 61 CAATTATATA ACTCGACTAC TTCAAGCAAT TTAAAAGAAA GTGACTCAAT TTTACTTAGC 121 CTCTTCATCA CTTGAGGGCA TCTCCAAGGG GAAATTTGGG CTAGTAACAC CATTAGGACA 181 AAAAACAACC CTATAATTTG TACTACCACT AGGGCAAGTA AATGTGCTAG TAGGATCATC 241 TTGTGGGTAG CTATACGCAT CAGGACATCT TTGTTTGAAA AATCTCGACA AATCAGTAGG 301 GCCACATGGA CCTTGTGTGC AACAATATTG TTGTCCTCCG AACGTGGTAC AAGGATTGTT 361 ACATCCTCCG GGTACCCTAA GTGAACCAGG ACATTCACCA TTTATATTAG CCGTACAATG 421 AATTGCATGG CATTTCCCTC CACTAGGATT GGTCGGGGCG AAAGTCATTG GAATATTAAA 481 TCCATCGACT AAAGAAATGT CCCAGAAATC TAGGTTGCTA AACTGGTCCA AGGCGTACTC 541 GGCCAGGGTG TTTGGTGGTT T Predicted gene structure (within gDNA segment 9570 to 2817): Exon 1 8541 8503 ( 39 n); cDNA 130 168 ( 39 n); score: 0.718 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0), Pa: 0.189 (s: 0.72) Exon 2 5349 4956 ( 394 n); cDNA 169 561 ( 393 n); score: 0.830 PPA cDNA 13 1 MATCH C08HBa0235H18.1- SGN-E355505- 0.830 433 0.772 C PGS_C08HBa0235H18.1-_SGN-E355505- (8541 8503,5349 4956) Alignment (genomic DNA sequence = upper lines): ACTTGTAGGC ATCTCCAATG GGAAATTTGT TGTTTCATTG TGAGTAGAGC CATAAGGACA 8482 ||||| ||| |||||||| | ||||||||| | | ACTTGAGGGC ATCTCCAAGG GGAAATTTGG GCTAGTAAC. .......... .......... 168 GAACATTATC TTGTAGTCTG TAGTCCAACT CTGACAAGTA AAAGTACTAG TTGGATCGTC 8422 .......... .......... .......... .......... .......... .......... 168 TTGAGGGTAA CTATAGGCAT CAGGACATCT TTGTTTGAAA AATCTTGACA ATTCAGTAGG 8362 .......... .......... .......... .......... .......... .......... 168 ACCACATGGA CCGTGATTAC AACAATATTG TTGTCCTCCG AATGTTGTAC AAGGGTTGTT 8302 .......... .......... .......... .......... .......... .......... 168 ACATCCTCCA GGTACCCTAA GTGAACCAGG GCATTCACCG TTTATATTGG CTGTGCATTG 8242 .......... .......... .......... .......... .......... .......... 168 AATTGGATGA CATTTTCCAG GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA 8182 .......... .......... .......... .......... .......... .......... 168 TCCATCAATA ACAGAAATAT CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC 8122 .......... .......... .......... .......... .......... .......... 168 AGCTAAGGTG TTTGGTGGTT TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC 8062 .......... .......... .......... .......... .......... .......... 168 AGTCTGGCAC CAACCTCTTC CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG 8002 .......... .......... .......... .......... .......... .......... 168 TGCCATTTTA GTGCCAGGTG GGGCCCAAAA CCACCAACTC TGACCTCTCT CGAGACGTCG 7942 .......... .......... .......... .......... .......... .......... 168 ACCACCTCCT ACGGGGACCG CTGCCGCCCA AACGGTGTAG GGGCAGTTGT TATGGACCTC 7882 .......... .......... .......... .......... .......... .......... 168 AAATACACCG GAACCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAAAACA CTAAACAAGT 7822 .......... .......... .......... .......... .......... .......... 168 TGTCAAGTGA CTCATTTTAG TATAAGAAGT TGTAGGATAT ATTTGCATAT CGAGCTAGGG 7762 .......... .......... .......... .......... .......... .......... 168 GTTTATATAG TGGTATGGCG GCTTTTTTTC ACTATGGACA TTAATCATAT AAATATTGGC 7702 .......... .......... .......... .......... .......... .......... 168 ACTTGTTATA AACATATATA GAAAATTAAA AAAAAAAATT GTATCCAAAA TATCTCCACT 7642 .......... .......... .......... .......... .......... .......... 168 TGAAAAAAAA AGCCGCCAAT ATAATATGAG TACAGCCTAT TATAAGTAAT ATATTTTGTT 7582 .......... .......... .......... .......... .......... .......... 168 CACTCCAGTC ATATTTCACA GTTCAACTTT TTGCTATTTT GAAAATTTAT GCATTAACAC 7522 .......... .......... .......... .......... .......... .......... 168 ATTATGATAT TTATAATGAT TAAAAAAAAA AGAGAAGATA TTTTTTAATT AAGTGATATA 7462 .......... .......... .......... .......... .......... .......... 168 TACGTATTAT TAGTTTTGTG TTTAACTATA TATTAATTTT AAATTATTTA GTTTAGTATA 7402 .......... .......... .......... .......... .......... .......... 168 TACAACAAAT CGGAAAAATG CATGGCAGGG CATGAAACCT AAAATTGTGG AAAATTTCCT 7342 .......... .......... .......... .......... .......... .......... 168 AATTTTTTTT GAACATTTTT TCATGAGAAA TTTAGTTAGT AGAGAATTCT CTTCATAATT 7282 .......... .......... .......... .......... .......... .......... 168 TTTATTGGTT ATGTTTTCAT AAATAAAATA ACTTAAAAAT TTTGAATTAC AAATTTGTAA 7222 .......... .......... .......... .......... .......... .......... 168 TTTTTGTTTA CAGACAATTG CCTTTTTTCC CTTGATTATT TTTTTCCGTC GTATATATAT 7162 .......... .......... .......... .......... .......... .......... 168 AGTGGATTTT TATATTAAAT TATTTATAGC ATATTTATCA AGTGGACATA ATAATTAATT 7102 .......... .......... .......... .......... .......... .......... 168 GAAAATGTGC ATGCATTCTA CAGTCAAAAA AGTTGAGCAA ATGGGTAGGC GTAGAGATGA 7042 .......... .......... .......... .......... .......... .......... 168 GTGGAACCTT AAAAGTTTGA ATTTTTTTTT TATTCGATAC AAGCTATGTA GGTCTTGTTT 6982 .......... .......... .......... .......... .......... .......... 168 CACACGAGAA AAATGAATTT TGAAATTAGT TATGAATTTC GTTACTAATC TATCTCTAAT 6922 .......... .......... .......... .......... .......... .......... 168 ATGCAAAGTT TTGAATAATC TATCCCTAAT TGGTTACTAG ATATAGAACT AGCAATGATT 6862 .......... .......... .......... .......... .......... .......... 168 TTTGTTATTG ATTGAATAAT TTGTTCGATA TTGATTTTTG TTTTATGTTT CCTCCGTCCG 6802 .......... .......... .......... .......... .......... .......... 168 ATATTGTTTG TTATGGTTTC TATTTATAGA CTCAAACTAT AAAAACTTTG ACTAACATTT 6742 .......... .......... .......... .......... .......... .......... 168 GAAGATACAT TTTTTTATCA TATTAATATG AAAAGATTGT AATTTATAGT ACTTTTCATA 6682 .......... .......... .......... .......... .......... .......... 168 TTGTTTTAGA ATATTTAATT TTTTTGGTTT AAAGTATCGA ATTAATGTGA TTTAATTTAC 6622 .......... .......... .......... .......... .......... .......... 168 CTTTAGAAAT CAATCAAAAT TGACTTTCGA TAAGCGTAAC ATGACAAATA TTTCTGGACG 6562 .......... .......... .......... .......... .......... .......... 168 GAGGGAGTAT TGATTTTTTA TCGTTGTCAT CATGGTCGTC TTTGTTTGTT GGTTCATAAT 6502 .......... .......... .......... .......... .......... .......... 168 AAGATATTCT TGAGTTTAAA TGAGATGATT GTATATTTGA GTTTAATTTT GGAACATGCA 6442 .......... .......... .......... .......... .......... .......... 168 AGAGTTTTTG GATTTGATTT TGATCGGTAG ATGTACTAGT ACCTGCCACC AAAACATCGT 6382 .......... .......... .......... .......... .......... .......... 168 GAAGGATTCA GTGAACGACT TGAAACTTAG TAACACAAGA CAATTCACTG AATGGTTGTT 6322 .......... .......... .......... .......... .......... .......... 168 GGCTCTACCG GAGGAGTCTG AAATCAACAA CGTGTAACTG CTTGGGCAGA ATAAAAGAAC 6262 .......... .......... .......... .......... .......... .......... 168 TTAAATTGTT TTAATAGAAT TTTTTAAGTA ACATTGCAAT TATTTAAGCA ATACGAACGC 6202 .......... .......... .......... .......... .......... .......... 168 CCAATTGTAT TTTATTTTAT TTTTTTATAA TAAAAGAGTT TTGGAAGTAA TGAATTTTAA 6142 .......... .......... .......... .......... .......... .......... 168 TACAATATCA ATATTTAAAT AATGTTGAAT TCTTAGCTTA GGCATTGAAT CGCAATTGAA 6082 .......... .......... .......... .......... .......... .......... 168 AGTGAAAGCC CTTTTTTGCT ATTTCAAGTT ATGAATTCAG ATACTAAAGG ATAACGTCTT 6022 .......... .......... .......... .......... .......... .......... 168 TTAGAAGGAA GATATTAATG GGGTAAGTGA TTTTTAAAAG TTGACTTTTA TATAAAATTA 5962 .......... .......... .......... .......... .......... .......... 168 TCTTCTTCTT TTTTCTTTTT CTTTTTTGTA TATCGACTCA TTTAATTATC AGTTTAACTT 5902 .......... .......... .......... .......... .......... .......... 168 AATGTTCGAA TCTTTAAGCT TTTTAATTAA TATTGAATTT ATTATTTCTT TAAACTTATA 5842 .......... .......... .......... .......... .......... .......... 168 AATTCAAATC TAAACACTTA TTAAAATTTT AATGAATTTT CATATACTAT AGTATACTTG 5782 .......... .......... .......... .......... .......... .......... 168 AAAATGTTCC AAAAGCCGCC AATAAAAAAA TATTTCCATC TGTTTGACTT ATATTATGAC 5722 .......... .......... .......... .......... .......... .......... 168 ATGTAACGAG TTGTCCCTAC AATTTTATAT TTTCAGATCT AGGTACTTTA ATATATTAAC 5662 .......... .......... .......... .......... .......... .......... 168 TAGACTAATT TTTTTTCATT ATAATTAAAA ATTTTAAGAA AAAAACTGTA CTCCAGATAT 5602 .......... .......... .......... .......... .......... .......... 168 AATTTCAATT TAAAATTAAA ATACCATATA TAAGACAAAG CATCGATCAT AGATTGTTAT 5542 .......... .......... .......... .......... .......... .......... 168 TCAGATCTTA GCCACTTCAA ACAAACAAAT GTAAAAGAAA TGTGTACAAG GCAAATTAAA 5482 .......... .......... .......... .......... .......... .......... 168 GACAATGTCC ATCTTCAAAA CAAATTTAAC AAAAAAGAGA TTGGCTCAAC TCAAGATTTC 5422 .......... .......... .......... .......... .......... .......... 168 TACTTAATTA AGCCACTTCA AGAGTATTTG TAGGAATCTC CAATGGGAAA TTTGTTGTTT 5362 .......... .......... .......... .......... .......... .......... 168 CATTGTGAGT AGAGCCATAA GGACAAAACA TAACCTTGTA GTCTGTAGTC CAACTCTGAC 5302 | |||| | |||||||| | |||| | || | |||| | | ||| | | .......... ..A-CCATTA GGACAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC 215 AAGTAAAAGT ACTTGTTGGA TCGTCTTGAG GATAACTATA GGCATCGGGA CATCTTTGTT 5242 ||||||| || || || ||| || ||||| | | || ||||| ||||| ||| |||||||||| AAGTAAATGT GCTAGTAGGA TCATCTTGTG GGTAGCTATA CGCATCAGGA CATCTTTGTT 275 TGAAAAATCT TGACAAATCG GTAGGACCAC ATGGACCTTG AGTGCAACAA TATTGTTGTC 5182 |||||||||| |||||||| ||||| |||| |||||||||| ||||||||| |||||||||| TGAAAAATCT CGACAAATCA GTAGGGCCAC ATGGACCTTG TGTGCAACAA TATTGTTGTC 335 CTCCGAATGT AGTACAAGGG TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGGCATT 5122 ||||||| || |||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CTCCGAACGT GGTACAAGGA TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGACATT 395 CACCGTTTAT ATTAGCAACA CATTGAATTG GATGACATTT TCCCGGCCCA GGGTTAGTTG 5062 |||| ||||| |||||| | || ||||||| ||| ||||| || | | || || || | CACCATTTAT ATTAGCCGTA CAATGAATTG CATGGCATTT CCCTCCACTA GGATTGGTCG 455 GGCCGAAAGA CATAGGGATG TTGAATCCAT CAATAACAGA AATGTCCCAG AAATCTAAGT 5002 || |||||| ||| || || || ||||||| | | | ||| |||||||||| ||||||| || GGGCGAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAG AAATCTAGGT 515 TGCTAAATTG ATTCAAAGCG TATTCAGCTA AGGTGTTTGG TGGTTT 4956 ||||||| || | ||| ||| || || || | ||||||||| |||||| TGCTAAACTG GTCCAAGGCG TACTCGGCCA GGGTGTTTGG TGGTTT 561 hqPGS_C08HBa0235H18.1-_SGN-E355505- (8541 8503,5349 4956) ******************************************************************************** EST sequence 429 -strand 540 n (File: SGN-E355527-) 1 TTTTTTTTTT TGTGATGATG TGACTTTTAT TCATGTAATT ATATTAGGTT TATTACAAGC 61 CAATTATATA ACTCGACTAC TTCAAGCAAT TTAAAAGAAA GTGACTCAAT TTTACTTAGC 121 CTCTTCATCA CTTGAGGGCA TCTCCAAGGG GAAATTTGGG CTAGTAACAC CATTAGGACA 181 AAAAACAACC CTATAATTTG TACTACCACT AGGGCAAGTA AATGTGCTAG TAGGATCATC 241 TTGTGGGTAG CTATACGCAT CAGGACATCT TTGTTTGAAA AATCTCGACA AATCAGTAGG 301 GCCACATGGA CCTTGTGTGC AACAATATTG TTGTCCTCCG AACGTGGTAC AAGGATTGTT 361 ACATCCTCCG GGTACCCTAA GTGAACCAGG ACATTCACCA TTTATATTAG CCGTACAATG 421 AATTGCATGG CATTTCCCTC CACTAGGATT GGTCGGGGCG AAAGTCATTG GAATATTAAA 481 TCCATCGACT AAAGAAATGT CCCAGAAATC TAGGTTGCTA AACTGGTCCA AGGCGTACTC Predicted gene structure (within gDNA segment 9570 to 3027): Exon 1 8541 8503 ( 39 n); cDNA 130 168 ( 39 n); score: 0.718 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0), Pa: 0.189 (s: 0.72) Exon 2 5349 4977 ( 373 n); cDNA 169 540 ( 372 n); score: 0.828 PPA cDNA 13 1 MATCH C08HBa0235H18.1- SGN-E355527- 0.828 412 0.763 C PGS_C08HBa0235H18.1-_SGN-E355527- (8541 8503,5349 4977) Alignment (genomic DNA sequence = upper lines): ACTTGTAGGC ATCTCCAATG GGAAATTTGT TGTTTCATTG TGAGTAGAGC CATAAGGACA 8482 ||||| ||| |||||||| | ||||||||| | | ACTTGAGGGC ATCTCCAAGG GGAAATTTGG GCTAGTAAC. .......... .......... 168 GAACATTATC TTGTAGTCTG TAGTCCAACT CTGACAAGTA AAAGTACTAG TTGGATCGTC 8422 .......... .......... .......... .......... .......... .......... 168 TTGAGGGTAA CTATAGGCAT CAGGACATCT TTGTTTGAAA AATCTTGACA ATTCAGTAGG 8362 .......... .......... .......... .......... .......... .......... 168 ACCACATGGA CCGTGATTAC AACAATATTG TTGTCCTCCG AATGTTGTAC AAGGGTTGTT 8302 .......... .......... .......... .......... .......... .......... 168 ACATCCTCCA GGTACCCTAA GTGAACCAGG GCATTCACCG TTTATATTGG CTGTGCATTG 8242 .......... .......... .......... .......... .......... .......... 168 AATTGGATGA CATTTTCCAG GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA 8182 .......... .......... .......... .......... .......... .......... 168 TCCATCAATA ACAGAAATAT CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC 8122 .......... .......... .......... .......... .......... .......... 168 AGCTAAGGTG TTTGGTGGTT TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC 8062 .......... .......... .......... .......... .......... .......... 168 AGTCTGGCAC CAACCTCTTC CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG 8002 .......... .......... .......... .......... .......... .......... 168 TGCCATTTTA GTGCCAGGTG GGGCCCAAAA CCACCAACTC TGACCTCTCT CGAGACGTCG 7942 .......... .......... .......... .......... .......... .......... 168 ACCACCTCCT ACGGGGACCG CTGCCGCCCA AACGGTGTAG GGGCAGTTGT TATGGACCTC 7882 .......... .......... .......... .......... .......... .......... 168 AAATACACCG GAACCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAAAACA CTAAACAAGT 7822 .......... .......... .......... .......... .......... .......... 168 TGTCAAGTGA CTCATTTTAG TATAAGAAGT TGTAGGATAT ATTTGCATAT CGAGCTAGGG 7762 .......... .......... .......... .......... .......... .......... 168 GTTTATATAG TGGTATGGCG GCTTTTTTTC ACTATGGACA TTAATCATAT AAATATTGGC 7702 .......... .......... .......... .......... .......... .......... 168 ACTTGTTATA AACATATATA GAAAATTAAA AAAAAAAATT GTATCCAAAA TATCTCCACT 7642 .......... .......... .......... .......... .......... .......... 168 TGAAAAAAAA AGCCGCCAAT ATAATATGAG TACAGCCTAT TATAAGTAAT ATATTTTGTT 7582 .......... .......... .......... .......... .......... .......... 168 CACTCCAGTC ATATTTCACA GTTCAACTTT TTGCTATTTT GAAAATTTAT GCATTAACAC 7522 .......... .......... .......... .......... .......... .......... 168 ATTATGATAT TTATAATGAT TAAAAAAAAA AGAGAAGATA TTTTTTAATT AAGTGATATA 7462 .......... .......... .......... .......... .......... .......... 168 TACGTATTAT TAGTTTTGTG TTTAACTATA TATTAATTTT AAATTATTTA GTTTAGTATA 7402 .......... .......... .......... .......... .......... .......... 168 TACAACAAAT CGGAAAAATG CATGGCAGGG CATGAAACCT AAAATTGTGG AAAATTTCCT 7342 .......... .......... .......... .......... .......... .......... 168 AATTTTTTTT GAACATTTTT TCATGAGAAA TTTAGTTAGT AGAGAATTCT CTTCATAATT 7282 .......... .......... .......... .......... .......... .......... 168 TTTATTGGTT ATGTTTTCAT AAATAAAATA ACTTAAAAAT TTTGAATTAC AAATTTGTAA 7222 .......... .......... .......... .......... .......... .......... 168 TTTTTGTTTA CAGACAATTG CCTTTTTTCC CTTGATTATT TTTTTCCGTC GTATATATAT 7162 .......... .......... .......... .......... .......... .......... 168 AGTGGATTTT TATATTAAAT TATTTATAGC ATATTTATCA AGTGGACATA ATAATTAATT 7102 .......... .......... .......... .......... .......... .......... 168 GAAAATGTGC ATGCATTCTA CAGTCAAAAA AGTTGAGCAA ATGGGTAGGC GTAGAGATGA 7042 .......... .......... .......... .......... .......... .......... 168 GTGGAACCTT AAAAGTTTGA ATTTTTTTTT TATTCGATAC AAGCTATGTA GGTCTTGTTT 6982 .......... .......... .......... .......... .......... .......... 168 CACACGAGAA AAATGAATTT TGAAATTAGT TATGAATTTC GTTACTAATC TATCTCTAAT 6922 .......... .......... .......... .......... .......... .......... 168 ATGCAAAGTT TTGAATAATC TATCCCTAAT TGGTTACTAG ATATAGAACT AGCAATGATT 6862 .......... .......... .......... .......... .......... .......... 168 TTTGTTATTG ATTGAATAAT TTGTTCGATA TTGATTTTTG TTTTATGTTT CCTCCGTCCG 6802 .......... .......... .......... .......... .......... .......... 168 ATATTGTTTG TTATGGTTTC TATTTATAGA CTCAAACTAT AAAAACTTTG ACTAACATTT 6742 .......... .......... .......... .......... .......... .......... 168 GAAGATACAT TTTTTTATCA TATTAATATG AAAAGATTGT AATTTATAGT ACTTTTCATA 6682 .......... .......... .......... .......... .......... .......... 168 TTGTTTTAGA ATATTTAATT TTTTTGGTTT AAAGTATCGA ATTAATGTGA TTTAATTTAC 6622 .......... .......... .......... .......... .......... .......... 168 CTTTAGAAAT CAATCAAAAT TGACTTTCGA TAAGCGTAAC ATGACAAATA TTTCTGGACG 6562 .......... .......... .......... .......... .......... .......... 168 GAGGGAGTAT TGATTTTTTA TCGTTGTCAT CATGGTCGTC TTTGTTTGTT GGTTCATAAT 6502 .......... .......... .......... .......... .......... .......... 168 AAGATATTCT TGAGTTTAAA TGAGATGATT GTATATTTGA GTTTAATTTT GGAACATGCA 6442 .......... .......... .......... .......... .......... .......... 168 AGAGTTTTTG GATTTGATTT TGATCGGTAG ATGTACTAGT ACCTGCCACC AAAACATCGT 6382 .......... .......... .......... .......... .......... .......... 168 GAAGGATTCA GTGAACGACT TGAAACTTAG TAACACAAGA CAATTCACTG AATGGTTGTT 6322 .......... .......... .......... .......... .......... .......... 168 GGCTCTACCG GAGGAGTCTG AAATCAACAA CGTGTAACTG CTTGGGCAGA ATAAAAGAAC 6262 .......... .......... .......... .......... .......... .......... 168 TTAAATTGTT TTAATAGAAT TTTTTAAGTA ACATTGCAAT TATTTAAGCA ATACGAACGC 6202 .......... .......... .......... .......... .......... .......... 168 CCAATTGTAT TTTATTTTAT TTTTTTATAA TAAAAGAGTT TTGGAAGTAA TGAATTTTAA 6142 .......... .......... .......... .......... .......... .......... 168 TACAATATCA ATATTTAAAT AATGTTGAAT TCTTAGCTTA GGCATTGAAT CGCAATTGAA 6082 .......... .......... .......... .......... .......... .......... 168 AGTGAAAGCC CTTTTTTGCT ATTTCAAGTT ATGAATTCAG ATACTAAAGG ATAACGTCTT 6022 .......... .......... .......... .......... .......... .......... 168 TTAGAAGGAA GATATTAATG GGGTAAGTGA TTTTTAAAAG TTGACTTTTA TATAAAATTA 5962 .......... .......... .......... .......... .......... .......... 168 TCTTCTTCTT TTTTCTTTTT CTTTTTTGTA TATCGACTCA TTTAATTATC AGTTTAACTT 5902 .......... .......... .......... .......... .......... .......... 168 AATGTTCGAA TCTTTAAGCT TTTTAATTAA TATTGAATTT ATTATTTCTT TAAACTTATA 5842 .......... .......... .......... .......... .......... .......... 168 AATTCAAATC TAAACACTTA TTAAAATTTT AATGAATTTT CATATACTAT AGTATACTTG 5782 .......... .......... .......... .......... .......... .......... 168 AAAATGTTCC AAAAGCCGCC AATAAAAAAA TATTTCCATC TGTTTGACTT ATATTATGAC 5722 .......... .......... .......... .......... .......... .......... 168 ATGTAACGAG TTGTCCCTAC AATTTTATAT TTTCAGATCT AGGTACTTTA ATATATTAAC 5662 .......... .......... .......... .......... .......... .......... 168 TAGACTAATT TTTTTTCATT ATAATTAAAA ATTTTAAGAA AAAAACTGTA CTCCAGATAT 5602 .......... .......... .......... .......... .......... .......... 168 AATTTCAATT TAAAATTAAA ATACCATATA TAAGACAAAG CATCGATCAT AGATTGTTAT 5542 .......... .......... .......... .......... .......... .......... 168 TCAGATCTTA GCCACTTCAA ACAAACAAAT GTAAAAGAAA TGTGTACAAG GCAAATTAAA 5482 .......... .......... .......... .......... .......... .......... 168 GACAATGTCC ATCTTCAAAA CAAATTTAAC AAAAAAGAGA TTGGCTCAAC TCAAGATTTC 5422 .......... .......... .......... .......... .......... .......... 168 TACTTAATTA AGCCACTTCA AGAGTATTTG TAGGAATCTC CAATGGGAAA TTTGTTGTTT 5362 .......... .......... .......... .......... .......... .......... 168 CATTGTGAGT AGAGCCATAA GGACAAAACA TAACCTTGTA GTCTGTAGTC CAACTCTGAC 5302 | |||| | |||||||| | |||| | || | |||| | | ||| | | .......... ..A-CCATTA GGACAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC 215 AAGTAAAAGT ACTTGTTGGA TCGTCTTGAG GATAACTATA GGCATCGGGA CATCTTTGTT 5242 ||||||| || || || ||| || ||||| | | || ||||| ||||| ||| |||||||||| AAGTAAATGT GCTAGTAGGA TCATCTTGTG GGTAGCTATA CGCATCAGGA CATCTTTGTT 275 TGAAAAATCT TGACAAATCG GTAGGACCAC ATGGACCTTG AGTGCAACAA TATTGTTGTC 5182 |||||||||| |||||||| ||||| |||| |||||||||| ||||||||| |||||||||| TGAAAAATCT CGACAAATCA GTAGGGCCAC ATGGACCTTG TGTGCAACAA TATTGTTGTC 335 CTCCGAATGT AGTACAAGGG TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGGCATT 5122 ||||||| || |||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CTCCGAACGT GGTACAAGGA TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGACATT 395 CACCGTTTAT ATTAGCAACA CATTGAATTG GATGACATTT TCCCGGCCCA GGGTTAGTTG 5062 |||| ||||| |||||| | || ||||||| ||| ||||| || | | || || || | CACCATTTAT ATTAGCCGTA CAATGAATTG CATGGCATTT CCCTCCACTA GGATTGGTCG 455 GGCCGAAAGA CATAGGGATG TTGAATCCAT CAATAACAGA AATGTCCCAG AAATCTAAGT 5002 || |||||| ||| || || || ||||||| | | | ||| |||||||||| ||||||| || GGGCGAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAG AAATCTAGGT 515 TGCTAAATTG ATTCAAAGCG TATTC 4977 ||||||| || | ||| ||| || || TGCTAAACTG GTCCAAGGCG TACTC 540 hqPGS_C08HBa0235H18.1-_SGN-E355527- (8541 8503,5349 4977) ******************************************************************************** EST sequence 16 -strand 533 n (File: SGN-E351103-) 1 TTTTTTTTTT GTGATGATGT GACTTTTATT CATGTAATTA TATTAGGTTT ATTACAAGCC 61 AATTATATAA CTCGACTACT TCAAGCAATT TAAAAGAAAG TGACTCAATT TTACTTAGCC 121 TCTTCATCAC TTGAGGGCAT CTCCAAGGGG AAATTTGGGC TAGTAACACC ATTAGGACAA 181 AAAACAACCC TATAATTTGT ACTACCACTA GGGCAAGTAA ATGTGCTAGT AGGATCATCT 241 TGTGGGTAGC TATACGCATC AGGACATCTT TGTTTGAAAA ATCTCGACAA ATCAGTAGGG 301 CCACATGGAC CTTGTGTGCA ACAATATTGT TGTCCTCCGA ACGTGGTACA AGGATTGTTA 361 CATCCTCCGG GTACCCTAAG TGAACCAGGA CATTCACCAT TTATATTAGC CGTACAATGA 421 ATTGCATGGC ATTTCCCTCC ACTAGGATTG GTCGGGGCGA AAGTCATTGG AATATTAAAT 481 CCATCGACTA AAGAAATGTC CCAGAAATCT AGGTTGCTAA ACTGGTCCAA GGC Predicted gene structure (within gDNA segment 9560 to 3087): Exon 1 8541 8503 ( 39 n); cDNA 129 167 ( 39 n); score: 0.718 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0), Pa: 0.189 (s: 0.72) Exon 2 5349 4983 ( 367 n); cDNA 168 533 ( 366 n); score: 0.828 PPA cDNA 12 1 MATCH C08HBa0235H18.1- SGN-E351103- 0.828 406 0.762 C PGS_C08HBa0235H18.1-_SGN-E351103- (8541 8503,5349 4983) Alignment (genomic DNA sequence = upper lines): ACTTGTAGGC ATCTCCAATG GGAAATTTGT TGTTTCATTG TGAGTAGAGC CATAAGGACA 8482 ||||| ||| |||||||| | ||||||||| | | ACTTGAGGGC ATCTCCAAGG GGAAATTTGG GCTAGTAAC. .......... .......... 167 GAACATTATC TTGTAGTCTG TAGTCCAACT CTGACAAGTA AAAGTACTAG TTGGATCGTC 8422 .......... .......... .......... .......... .......... .......... 167 TTGAGGGTAA CTATAGGCAT CAGGACATCT TTGTTTGAAA AATCTTGACA ATTCAGTAGG 8362 .......... .......... .......... .......... .......... .......... 167 ACCACATGGA CCGTGATTAC AACAATATTG TTGTCCTCCG AATGTTGTAC AAGGGTTGTT 8302 .......... .......... .......... .......... .......... .......... 167 ACATCCTCCA GGTACCCTAA GTGAACCAGG GCATTCACCG TTTATATTGG CTGTGCATTG 8242 .......... .......... .......... .......... .......... .......... 167 AATTGGATGA CATTTTCCAG GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA 8182 .......... .......... .......... .......... .......... .......... 167 TCCATCAATA ACAGAAATAT CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC 8122 .......... .......... .......... .......... .......... .......... 167 AGCTAAGGTG TTTGGTGGTT TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC 8062 .......... .......... .......... .......... .......... .......... 167 AGTCTGGCAC CAACCTCTTC CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG 8002 .......... .......... .......... .......... .......... .......... 167 TGCCATTTTA GTGCCAGGTG GGGCCCAAAA CCACCAACTC TGACCTCTCT CGAGACGTCG 7942 .......... .......... .......... .......... .......... .......... 167 ACCACCTCCT ACGGGGACCG CTGCCGCCCA AACGGTGTAG GGGCAGTTGT TATGGACCTC 7882 .......... .......... .......... .......... .......... .......... 167 AAATACACCG GAACCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAAAACA CTAAACAAGT 7822 .......... .......... .......... .......... .......... .......... 167 TGTCAAGTGA CTCATTTTAG TATAAGAAGT TGTAGGATAT ATTTGCATAT CGAGCTAGGG 7762 .......... .......... .......... .......... .......... .......... 167 GTTTATATAG TGGTATGGCG GCTTTTTTTC ACTATGGACA TTAATCATAT AAATATTGGC 7702 .......... .......... .......... .......... .......... .......... 167 ACTTGTTATA AACATATATA GAAAATTAAA AAAAAAAATT GTATCCAAAA TATCTCCACT 7642 .......... .......... .......... .......... .......... .......... 167 TGAAAAAAAA AGCCGCCAAT ATAATATGAG TACAGCCTAT TATAAGTAAT ATATTTTGTT 7582 .......... .......... .......... .......... .......... .......... 167 CACTCCAGTC ATATTTCACA GTTCAACTTT TTGCTATTTT GAAAATTTAT GCATTAACAC 7522 .......... .......... .......... .......... .......... .......... 167 ATTATGATAT TTATAATGAT TAAAAAAAAA AGAGAAGATA TTTTTTAATT AAGTGATATA 7462 .......... .......... .......... .......... .......... .......... 167 TACGTATTAT TAGTTTTGTG TTTAACTATA TATTAATTTT AAATTATTTA GTTTAGTATA 7402 .......... .......... .......... .......... .......... .......... 167 TACAACAAAT CGGAAAAATG CATGGCAGGG CATGAAACCT AAAATTGTGG AAAATTTCCT 7342 .......... .......... .......... .......... .......... .......... 167 AATTTTTTTT GAACATTTTT TCATGAGAAA TTTAGTTAGT AGAGAATTCT CTTCATAATT 7282 .......... .......... .......... .......... .......... .......... 167 TTTATTGGTT ATGTTTTCAT AAATAAAATA ACTTAAAAAT TTTGAATTAC AAATTTGTAA 7222 .......... .......... .......... .......... .......... .......... 167 TTTTTGTTTA CAGACAATTG CCTTTTTTCC CTTGATTATT TTTTTCCGTC GTATATATAT 7162 .......... .......... .......... .......... .......... .......... 167 AGTGGATTTT TATATTAAAT TATTTATAGC ATATTTATCA AGTGGACATA ATAATTAATT 7102 .......... .......... .......... .......... .......... .......... 167 GAAAATGTGC ATGCATTCTA CAGTCAAAAA AGTTGAGCAA ATGGGTAGGC GTAGAGATGA 7042 .......... .......... .......... .......... .......... .......... 167 GTGGAACCTT AAAAGTTTGA ATTTTTTTTT TATTCGATAC AAGCTATGTA GGTCTTGTTT 6982 .......... .......... .......... .......... .......... .......... 167 CACACGAGAA AAATGAATTT TGAAATTAGT TATGAATTTC GTTACTAATC TATCTCTAAT 6922 .......... .......... .......... .......... .......... .......... 167 ATGCAAAGTT TTGAATAATC TATCCCTAAT TGGTTACTAG ATATAGAACT AGCAATGATT 6862 .......... .......... .......... .......... .......... .......... 167 TTTGTTATTG ATTGAATAAT TTGTTCGATA TTGATTTTTG TTTTATGTTT CCTCCGTCCG 6802 .......... .......... .......... .......... .......... .......... 167 ATATTGTTTG TTATGGTTTC TATTTATAGA CTCAAACTAT AAAAACTTTG ACTAACATTT 6742 .......... .......... .......... .......... .......... .......... 167 GAAGATACAT TTTTTTATCA TATTAATATG AAAAGATTGT AATTTATAGT ACTTTTCATA 6682 .......... .......... .......... .......... .......... .......... 167 TTGTTTTAGA ATATTTAATT TTTTTGGTTT AAAGTATCGA ATTAATGTGA TTTAATTTAC 6622 .......... .......... .......... .......... .......... .......... 167 CTTTAGAAAT CAATCAAAAT TGACTTTCGA TAAGCGTAAC ATGACAAATA TTTCTGGACG 6562 .......... .......... .......... .......... .......... .......... 167 GAGGGAGTAT TGATTTTTTA TCGTTGTCAT CATGGTCGTC TTTGTTTGTT GGTTCATAAT 6502 .......... .......... .......... .......... .......... .......... 167 AAGATATTCT TGAGTTTAAA TGAGATGATT GTATATTTGA GTTTAATTTT GGAACATGCA 6442 .......... .......... .......... .......... .......... .......... 167 AGAGTTTTTG GATTTGATTT TGATCGGTAG ATGTACTAGT ACCTGCCACC AAAACATCGT 6382 .......... .......... .......... .......... .......... .......... 167 GAAGGATTCA GTGAACGACT TGAAACTTAG TAACACAAGA CAATTCACTG AATGGTTGTT 6322 .......... .......... .......... .......... .......... .......... 167 GGCTCTACCG GAGGAGTCTG AAATCAACAA CGTGTAACTG CTTGGGCAGA ATAAAAGAAC 6262 .......... .......... .......... .......... .......... .......... 167 TTAAATTGTT TTAATAGAAT TTTTTAAGTA ACATTGCAAT TATTTAAGCA ATACGAACGC 6202 .......... .......... .......... .......... .......... .......... 167 CCAATTGTAT TTTATTTTAT TTTTTTATAA TAAAAGAGTT TTGGAAGTAA TGAATTTTAA 6142 .......... .......... .......... .......... .......... .......... 167 TACAATATCA ATATTTAAAT AATGTTGAAT TCTTAGCTTA GGCATTGAAT CGCAATTGAA 6082 .......... .......... .......... .......... .......... .......... 167 AGTGAAAGCC CTTTTTTGCT ATTTCAAGTT ATGAATTCAG ATACTAAAGG ATAACGTCTT 6022 .......... .......... .......... .......... .......... .......... 167 TTAGAAGGAA GATATTAATG GGGTAAGTGA TTTTTAAAAG TTGACTTTTA TATAAAATTA 5962 .......... .......... .......... .......... .......... .......... 167 TCTTCTTCTT TTTTCTTTTT CTTTTTTGTA TATCGACTCA TTTAATTATC AGTTTAACTT 5902 .......... .......... .......... .......... .......... .......... 167 AATGTTCGAA TCTTTAAGCT TTTTAATTAA TATTGAATTT ATTATTTCTT TAAACTTATA 5842 .......... .......... .......... .......... .......... .......... 167 AATTCAAATC TAAACACTTA TTAAAATTTT AATGAATTTT CATATACTAT AGTATACTTG 5782 .......... .......... .......... .......... .......... .......... 167 AAAATGTTCC AAAAGCCGCC AATAAAAAAA TATTTCCATC TGTTTGACTT ATATTATGAC 5722 .......... .......... .......... .......... .......... .......... 167 ATGTAACGAG TTGTCCCTAC AATTTTATAT TTTCAGATCT AGGTACTTTA ATATATTAAC 5662 .......... .......... .......... .......... .......... .......... 167 TAGACTAATT TTTTTTCATT ATAATTAAAA ATTTTAAGAA AAAAACTGTA CTCCAGATAT 5602 .......... .......... .......... .......... .......... .......... 167 AATTTCAATT TAAAATTAAA ATACCATATA TAAGACAAAG CATCGATCAT AGATTGTTAT 5542 .......... .......... .......... .......... .......... .......... 167 TCAGATCTTA GCCACTTCAA ACAAACAAAT GTAAAAGAAA TGTGTACAAG GCAAATTAAA 5482 .......... .......... .......... .......... .......... .......... 167 GACAATGTCC ATCTTCAAAA CAAATTTAAC AAAAAAGAGA TTGGCTCAAC TCAAGATTTC 5422 .......... .......... .......... .......... .......... .......... 167 TACTTAATTA AGCCACTTCA AGAGTATTTG TAGGAATCTC CAATGGGAAA TTTGTTGTTT 5362 .......... .......... .......... .......... .......... .......... 167 CATTGTGAGT AGAGCCATAA GGACAAAACA TAACCTTGTA GTCTGTAGTC CAACTCTGAC 5302 | |||| | |||||||| | |||| | || | |||| | | ||| | | .......... ..A-CCATTA GGACAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC 214 AAGTAAAAGT ACTTGTTGGA TCGTCTTGAG GATAACTATA GGCATCGGGA CATCTTTGTT 5242 ||||||| || || || ||| || ||||| | | || ||||| ||||| ||| |||||||||| AAGTAAATGT GCTAGTAGGA TCATCTTGTG GGTAGCTATA CGCATCAGGA CATCTTTGTT 274 TGAAAAATCT TGACAAATCG GTAGGACCAC ATGGACCTTG AGTGCAACAA TATTGTTGTC 5182 |||||||||| |||||||| ||||| |||| |||||||||| ||||||||| |||||||||| TGAAAAATCT CGACAAATCA GTAGGGCCAC ATGGACCTTG TGTGCAACAA TATTGTTGTC 334 CTCCGAATGT AGTACAAGGG TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGGCATT 5122 ||||||| || |||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CTCCGAACGT GGTACAAGGA TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGACATT 394 CACCGTTTAT ATTAGCAACA CATTGAATTG GATGACATTT TCCCGGCCCA GGGTTAGTTG 5062 |||| ||||| |||||| | || ||||||| ||| ||||| || | | || || || | CACCATTTAT ATTAGCCGTA CAATGAATTG CATGGCATTT CCCTCCACTA GGATTGGTCG 454 GGCCGAAAGA CATAGGGATG TTGAATCCAT CAATAACAGA AATGTCCCAG AAATCTAAGT 5002 || |||||| ||| || || || ||||||| | | | ||| |||||||||| ||||||| || GGGCGAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAG AAATCTAGGT 514 TGCTAAATTG ATTCAAAGC 4983 ||||||| || | ||| || TGCTAAACTG GTCCAAGGC 533 hqPGS_C08HBa0235H18.1-_SGN-E351103- (8541 8503,5349 4983) ******************************************************************************** EST sequence 405 -strand 533 n (File: SGN-E357512-) 1 TTTTTTTTTT GTGATGATGT GACTTTTATT CATGTAATTA TATTAGGTTT ATTACAAGCC 61 AATTATATAA CTCGACTACT TCAAGCAATT TAAAAGAAAG TGACTCAATT TTACTTAGCC 121 TCTTCATCAC TTGAGGGCAT CTCCAAGGGG AAATTTGGGC TAGTAACACC ATTAGGACAA 181 AAAACAACCC TATAATTTGT ACTACCACTA GGGCAAGTAA ATGTGCTAGT AGGATCATCT 241 AGTGGGTAGC TATACGCATC AGGACATCTT TGTTTGAAAA ATCTCGACAA ATCAGTAGGG 301 CCACATGGAC CTTGTGTGCA ACAATATTGT TGTCCTCCGA ACGTGGTACA AGGATTGTTA 361 CATCCTCCGG GTACCCTAAG TGAACCAGGA CATTCACCAT TTATATTAGC CGTACAATGA 421 ATTGCATGGC ATTTCCCTCC ACTAGGATTG GTCGGGGCGA AAGTCATTGG AATATTAAAT 481 CCATCGACTG GAGAAATGTC CCAGAAATCT AGGTTGCTAA ACTGGTCCAA GGC Predicted gene structure (within gDNA segment 9560 to 3087): Exon 1 8541 8503 ( 39 n); cDNA 129 167 ( 39 n); score: 0.718 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0), Pa: 0.189 (s: 0.72) Exon 2 5349 4983 ( 367 n); cDNA 168 533 ( 366 n); score: 0.823 PPA cDNA 12 1 MATCH C08HBa0235H18.1- SGN-E357512- 0.823 406 0.762 C PGS_C08HBa0235H18.1-_SGN-E357512- (8541 8503,5349 4983) Alignment (genomic DNA sequence = upper lines): ACTTGTAGGC ATCTCCAATG GGAAATTTGT TGTTTCATTG TGAGTAGAGC CATAAGGACA 8482 ||||| ||| |||||||| | ||||||||| | | ACTTGAGGGC ATCTCCAAGG GGAAATTTGG GCTAGTAAC. .......... .......... 167 GAACATTATC TTGTAGTCTG TAGTCCAACT CTGACAAGTA AAAGTACTAG TTGGATCGTC 8422 .......... .......... .......... .......... .......... .......... 167 TTGAGGGTAA CTATAGGCAT CAGGACATCT TTGTTTGAAA AATCTTGACA ATTCAGTAGG 8362 .......... .......... .......... .......... .......... .......... 167 ACCACATGGA CCGTGATTAC AACAATATTG TTGTCCTCCG AATGTTGTAC AAGGGTTGTT 8302 .......... .......... .......... .......... .......... .......... 167 ACATCCTCCA GGTACCCTAA GTGAACCAGG GCATTCACCG TTTATATTGG CTGTGCATTG 8242 .......... .......... .......... .......... .......... .......... 167 AATTGGATGA CATTTTCCAG GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA 8182 .......... .......... .......... .......... .......... .......... 167 TCCATCAATA ACAGAAATAT CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC 8122 .......... .......... .......... .......... .......... .......... 167 AGCTAAGGTG TTTGGTGGTT TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC 8062 .......... .......... .......... .......... .......... .......... 167 AGTCTGGCAC CAACCTCTTC CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG 8002 .......... .......... .......... .......... .......... .......... 167 TGCCATTTTA GTGCCAGGTG GGGCCCAAAA CCACCAACTC TGACCTCTCT CGAGACGTCG 7942 .......... .......... .......... .......... .......... .......... 167 ACCACCTCCT ACGGGGACCG CTGCCGCCCA AACGGTGTAG GGGCAGTTGT TATGGACCTC 7882 .......... .......... .......... .......... .......... .......... 167 AAATACACCG GAACCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAAAACA CTAAACAAGT 7822 .......... .......... .......... .......... .......... .......... 167 TGTCAAGTGA CTCATTTTAG TATAAGAAGT TGTAGGATAT ATTTGCATAT CGAGCTAGGG 7762 .......... .......... .......... .......... .......... .......... 167 GTTTATATAG TGGTATGGCG GCTTTTTTTC ACTATGGACA TTAATCATAT AAATATTGGC 7702 .......... .......... .......... .......... .......... .......... 167 ACTTGTTATA AACATATATA GAAAATTAAA AAAAAAAATT GTATCCAAAA TATCTCCACT 7642 .......... .......... .......... .......... .......... .......... 167 TGAAAAAAAA AGCCGCCAAT ATAATATGAG TACAGCCTAT TATAAGTAAT ATATTTTGTT 7582 .......... .......... .......... .......... .......... .......... 167 CACTCCAGTC ATATTTCACA GTTCAACTTT TTGCTATTTT GAAAATTTAT GCATTAACAC 7522 .......... .......... .......... .......... .......... .......... 167 ATTATGATAT TTATAATGAT TAAAAAAAAA AGAGAAGATA TTTTTTAATT AAGTGATATA 7462 .......... .......... .......... .......... .......... .......... 167 TACGTATTAT TAGTTTTGTG TTTAACTATA TATTAATTTT AAATTATTTA GTTTAGTATA 7402 .......... .......... .......... .......... .......... .......... 167 TACAACAAAT CGGAAAAATG CATGGCAGGG CATGAAACCT AAAATTGTGG AAAATTTCCT 7342 .......... .......... .......... .......... .......... .......... 167 AATTTTTTTT GAACATTTTT TCATGAGAAA TTTAGTTAGT AGAGAATTCT CTTCATAATT 7282 .......... .......... .......... .......... .......... .......... 167 TTTATTGGTT ATGTTTTCAT AAATAAAATA ACTTAAAAAT TTTGAATTAC AAATTTGTAA 7222 .......... .......... .......... .......... .......... .......... 167 TTTTTGTTTA CAGACAATTG CCTTTTTTCC CTTGATTATT TTTTTCCGTC GTATATATAT 7162 .......... .......... .......... .......... .......... .......... 167 AGTGGATTTT TATATTAAAT TATTTATAGC ATATTTATCA AGTGGACATA ATAATTAATT 7102 .......... .......... .......... .......... .......... .......... 167 GAAAATGTGC ATGCATTCTA CAGTCAAAAA AGTTGAGCAA ATGGGTAGGC GTAGAGATGA 7042 .......... .......... .......... .......... .......... .......... 167 GTGGAACCTT AAAAGTTTGA ATTTTTTTTT TATTCGATAC AAGCTATGTA GGTCTTGTTT 6982 .......... .......... .......... .......... .......... .......... 167 CACACGAGAA AAATGAATTT TGAAATTAGT TATGAATTTC GTTACTAATC TATCTCTAAT 6922 .......... .......... .......... .......... .......... .......... 167 ATGCAAAGTT TTGAATAATC TATCCCTAAT TGGTTACTAG ATATAGAACT AGCAATGATT 6862 .......... .......... .......... .......... .......... .......... 167 TTTGTTATTG ATTGAATAAT TTGTTCGATA TTGATTTTTG TTTTATGTTT CCTCCGTCCG 6802 .......... .......... .......... .......... .......... .......... 167 ATATTGTTTG TTATGGTTTC TATTTATAGA CTCAAACTAT AAAAACTTTG ACTAACATTT 6742 .......... .......... .......... .......... .......... .......... 167 GAAGATACAT TTTTTTATCA TATTAATATG AAAAGATTGT AATTTATAGT ACTTTTCATA 6682 .......... .......... .......... .......... .......... .......... 167 TTGTTTTAGA ATATTTAATT TTTTTGGTTT AAAGTATCGA ATTAATGTGA TTTAATTTAC 6622 .......... .......... .......... .......... .......... .......... 167 CTTTAGAAAT CAATCAAAAT TGACTTTCGA TAAGCGTAAC ATGACAAATA TTTCTGGACG 6562 .......... .......... .......... .......... .......... .......... 167 GAGGGAGTAT TGATTTTTTA TCGTTGTCAT CATGGTCGTC TTTGTTTGTT GGTTCATAAT 6502 .......... .......... .......... .......... .......... .......... 167 AAGATATTCT TGAGTTTAAA TGAGATGATT GTATATTTGA GTTTAATTTT GGAACATGCA 6442 .......... .......... .......... .......... .......... .......... 167 AGAGTTTTTG GATTTGATTT TGATCGGTAG ATGTACTAGT ACCTGCCACC AAAACATCGT 6382 .......... .......... .......... .......... .......... .......... 167 GAAGGATTCA GTGAACGACT TGAAACTTAG TAACACAAGA CAATTCACTG AATGGTTGTT 6322 .......... .......... .......... .......... .......... .......... 167 GGCTCTACCG GAGGAGTCTG AAATCAACAA CGTGTAACTG CTTGGGCAGA ATAAAAGAAC 6262 .......... .......... .......... .......... .......... .......... 167 TTAAATTGTT TTAATAGAAT TTTTTAAGTA ACATTGCAAT TATTTAAGCA ATACGAACGC 6202 .......... .......... .......... .......... .......... .......... 167 CCAATTGTAT TTTATTTTAT TTTTTTATAA TAAAAGAGTT TTGGAAGTAA TGAATTTTAA 6142 .......... .......... .......... .......... .......... .......... 167 TACAATATCA ATATTTAAAT AATGTTGAAT TCTTAGCTTA GGCATTGAAT CGCAATTGAA 6082 .......... .......... .......... .......... .......... .......... 167 AGTGAAAGCC CTTTTTTGCT ATTTCAAGTT ATGAATTCAG ATACTAAAGG ATAACGTCTT 6022 .......... .......... .......... .......... .......... .......... 167 TTAGAAGGAA GATATTAATG GGGTAAGTGA TTTTTAAAAG TTGACTTTTA TATAAAATTA 5962 .......... .......... .......... .......... .......... .......... 167 TCTTCTTCTT TTTTCTTTTT CTTTTTTGTA TATCGACTCA TTTAATTATC AGTTTAACTT 5902 .......... .......... .......... .......... .......... .......... 167 AATGTTCGAA TCTTTAAGCT TTTTAATTAA TATTGAATTT ATTATTTCTT TAAACTTATA 5842 .......... .......... .......... .......... .......... .......... 167 AATTCAAATC TAAACACTTA TTAAAATTTT AATGAATTTT CATATACTAT AGTATACTTG 5782 .......... .......... .......... .......... .......... .......... 167 AAAATGTTCC AAAAGCCGCC AATAAAAAAA TATTTCCATC TGTTTGACTT ATATTATGAC 5722 .......... .......... .......... .......... .......... .......... 167 ATGTAACGAG TTGTCCCTAC AATTTTATAT TTTCAGATCT AGGTACTTTA ATATATTAAC 5662 .......... .......... .......... .......... .......... .......... 167 TAGACTAATT TTTTTTCATT ATAATTAAAA ATTTTAAGAA AAAAACTGTA CTCCAGATAT 5602 .......... .......... .......... .......... .......... .......... 167 AATTTCAATT TAAAATTAAA ATACCATATA TAAGACAAAG CATCGATCAT AGATTGTTAT 5542 .......... .......... .......... .......... .......... .......... 167 TCAGATCTTA GCCACTTCAA ACAAACAAAT GTAAAAGAAA TGTGTACAAG GCAAATTAAA 5482 .......... .......... .......... .......... .......... .......... 167 GACAATGTCC ATCTTCAAAA CAAATTTAAC AAAAAAGAGA TTGGCTCAAC TCAAGATTTC 5422 .......... .......... .......... .......... .......... .......... 167 TACTTAATTA AGCCACTTCA AGAGTATTTG TAGGAATCTC CAATGGGAAA TTTGTTGTTT 5362 .......... .......... .......... .......... .......... .......... 167 CATTGTGAGT AGAGCCATAA GGACAAAACA TAACCTTGTA GTCTGTAGTC CAACTCTGAC 5302 | |||| | |||||||| | |||| | || | |||| | | ||| | | .......... ..A-CCATTA GGACAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC 214 AAGTAAAAGT ACTTGTTGGA TCGTCTTGAG GATAACTATA GGCATCGGGA CATCTTTGTT 5242 ||||||| || || || ||| || ||| | | | || ||||| ||||| ||| |||||||||| AAGTAAATGT GCTAGTAGGA TCATCTAGTG GGTAGCTATA CGCATCAGGA CATCTTTGTT 274 TGAAAAATCT TGACAAATCG GTAGGACCAC ATGGACCTTG AGTGCAACAA TATTGTTGTC 5182 |||||||||| |||||||| ||||| |||| |||||||||| ||||||||| |||||||||| TGAAAAATCT CGACAAATCA GTAGGGCCAC ATGGACCTTG TGTGCAACAA TATTGTTGTC 334 CTCCGAATGT AGTACAAGGG TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGGCATT 5122 ||||||| || |||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CTCCGAACGT GGTACAAGGA TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGACATT 394 CACCGTTTAT ATTAGCAACA CATTGAATTG GATGACATTT TCCCGGCCCA GGGTTAGTTG 5062 |||| ||||| |||||| | || ||||||| ||| ||||| || | | || || || | CACCATTTAT ATTAGCCGTA CAATGAATTG CATGGCATTT CCCTCCACTA GGATTGGTCG 454 GGCCGAAAGA CATAGGGATG TTGAATCCAT CAATAACAGA AATGTCCCAG AAATCTAAGT 5002 || |||||| ||| || || || ||||||| | | ||| |||||||||| ||||||| || GGGCGAAAGT CATTGGAATA TTAAATCCAT CGACTGGAGA AATGTCCCAG AAATCTAGGT 514 TGCTAAATTG ATTCAAAGC 4983 ||||||| || | ||| || TGCTAAACTG GTCCAAGGC 533 hqPGS_C08HBa0235H18.1-_SGN-E357512- (8541 8503,5349 4983) ******************************************************************************** EST sequence 37 -strand 530 n (File: SGN-E350942-) 1 TTTTTTTTTT GTGATGATGT GACTTTTATT CATGTAATTA TATTAGGTTT ATTACAAGCC 61 AATTATATAA CTCGACTACT TCAAGCAATT TAAAAGAAAG TGACTCAATT TTACTTAGCC 121 TCTTCATCAC TTGAGGGCAT CTCCAAGGGG AAATTTGGGC TAGTAACACC ATTAGGACAA 181 AAAACAACCC TATAATTTGT ACTACCACTA GGGCAAGTAA ATGTGCTAGT AGGATCATCT 241 TGTGGGTAGC TATACGCATC AGGACATCTT TGTTTGAAAA ATCTCGACAA ATCAGTAGGG 301 CCACATGGAC CTTGTGTGCA ACAATATTGT TGTCCTCCGA ACGTGGTACA AGGATTGTTA 361 CATCCTCCGG GTACCCTAAG TGAACCAGGA CATTCACCAT TTATATTAGC CGTACAATGA 421 ATTGCATGGC ATTTCCCTCC ACTAGGATTG GTCGGGGCGA AAGTCATTGG AATATTAAAT 481 CCATCGACTA AAGAAATGTC CCAGAAATCT AGGTTGCTAA ACTGGTCCAA Predicted gene structure (within gDNA segment 9560 to 3117): Exon 1 8541 8503 ( 39 n); cDNA 129 167 ( 39 n); score: 0.718 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0), Pa: 0.189 (s: 0.72) Exon 2 5349 4986 ( 364 n); cDNA 168 530 ( 363 n); score: 0.830 PPA cDNA 12 1 MATCH C08HBa0235H18.1- SGN-E350942- 0.830 403 0.760 C PGS_C08HBa0235H18.1-_SGN-E350942- (8541 8503,5349 4986) Alignment (genomic DNA sequence = upper lines): ACTTGTAGGC ATCTCCAATG GGAAATTTGT TGTTTCATTG TGAGTAGAGC CATAAGGACA 8482 ||||| ||| |||||||| | ||||||||| | | ACTTGAGGGC ATCTCCAAGG GGAAATTTGG GCTAGTAAC. .......... .......... 167 GAACATTATC TTGTAGTCTG TAGTCCAACT CTGACAAGTA AAAGTACTAG TTGGATCGTC 8422 .......... .......... .......... .......... .......... .......... 167 TTGAGGGTAA CTATAGGCAT CAGGACATCT TTGTTTGAAA AATCTTGACA ATTCAGTAGG 8362 .......... .......... .......... .......... .......... .......... 167 ACCACATGGA CCGTGATTAC AACAATATTG TTGTCCTCCG AATGTTGTAC AAGGGTTGTT 8302 .......... .......... .......... .......... .......... .......... 167 ACATCCTCCA GGTACCCTAA GTGAACCAGG GCATTCACCG TTTATATTGG CTGTGCATTG 8242 .......... .......... .......... .......... .......... .......... 167 AATTGGATGA CATTTTCCAG GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA 8182 .......... .......... .......... .......... .......... .......... 167 TCCATCAATA ACAGAAATAT CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC 8122 .......... .......... .......... .......... .......... .......... 167 AGCTAAGGTG TTTGGTGGTT TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC 8062 .......... .......... .......... .......... .......... .......... 167 AGTCTGGCAC CAACCTCTTC CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG 8002 .......... .......... .......... .......... .......... .......... 167 TGCCATTTTA GTGCCAGGTG GGGCCCAAAA CCACCAACTC TGACCTCTCT CGAGACGTCG 7942 .......... .......... .......... .......... .......... .......... 167 ACCACCTCCT ACGGGGACCG CTGCCGCCCA AACGGTGTAG GGGCAGTTGT TATGGACCTC 7882 .......... .......... .......... .......... .......... .......... 167 AAATACACCG GAACCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAAAACA CTAAACAAGT 7822 .......... .......... .......... .......... .......... .......... 167 TGTCAAGTGA CTCATTTTAG TATAAGAAGT TGTAGGATAT ATTTGCATAT CGAGCTAGGG 7762 .......... .......... .......... .......... .......... .......... 167 GTTTATATAG TGGTATGGCG GCTTTTTTTC ACTATGGACA TTAATCATAT AAATATTGGC 7702 .......... .......... .......... .......... .......... .......... 167 ACTTGTTATA AACATATATA GAAAATTAAA AAAAAAAATT GTATCCAAAA TATCTCCACT 7642 .......... .......... .......... .......... .......... .......... 167 TGAAAAAAAA AGCCGCCAAT ATAATATGAG TACAGCCTAT TATAAGTAAT ATATTTTGTT 7582 .......... .......... .......... .......... .......... .......... 167 CACTCCAGTC ATATTTCACA GTTCAACTTT TTGCTATTTT GAAAATTTAT GCATTAACAC 7522 .......... .......... .......... .......... .......... .......... 167 ATTATGATAT TTATAATGAT TAAAAAAAAA AGAGAAGATA TTTTTTAATT AAGTGATATA 7462 .......... .......... .......... .......... .......... .......... 167 TACGTATTAT TAGTTTTGTG TTTAACTATA TATTAATTTT AAATTATTTA GTTTAGTATA 7402 .......... .......... .......... .......... .......... .......... 167 TACAACAAAT CGGAAAAATG CATGGCAGGG CATGAAACCT AAAATTGTGG AAAATTTCCT 7342 .......... .......... .......... .......... .......... .......... 167 AATTTTTTTT GAACATTTTT TCATGAGAAA TTTAGTTAGT AGAGAATTCT CTTCATAATT 7282 .......... .......... .......... .......... .......... .......... 167 TTTATTGGTT ATGTTTTCAT AAATAAAATA ACTTAAAAAT TTTGAATTAC AAATTTGTAA 7222 .......... .......... .......... .......... .......... .......... 167 TTTTTGTTTA CAGACAATTG CCTTTTTTCC CTTGATTATT TTTTTCCGTC GTATATATAT 7162 .......... .......... .......... .......... .......... .......... 167 AGTGGATTTT TATATTAAAT TATTTATAGC ATATTTATCA AGTGGACATA ATAATTAATT 7102 .......... .......... .......... .......... .......... .......... 167 GAAAATGTGC ATGCATTCTA CAGTCAAAAA AGTTGAGCAA ATGGGTAGGC GTAGAGATGA 7042 .......... .......... .......... .......... .......... .......... 167 GTGGAACCTT AAAAGTTTGA ATTTTTTTTT TATTCGATAC AAGCTATGTA GGTCTTGTTT 6982 .......... .......... .......... .......... .......... .......... 167 CACACGAGAA AAATGAATTT TGAAATTAGT TATGAATTTC GTTACTAATC TATCTCTAAT 6922 .......... .......... .......... .......... .......... .......... 167 ATGCAAAGTT TTGAATAATC TATCCCTAAT TGGTTACTAG ATATAGAACT AGCAATGATT 6862 .......... .......... .......... .......... .......... .......... 167 TTTGTTATTG ATTGAATAAT TTGTTCGATA TTGATTTTTG TTTTATGTTT CCTCCGTCCG 6802 .......... .......... .......... .......... .......... .......... 167 ATATTGTTTG TTATGGTTTC TATTTATAGA CTCAAACTAT AAAAACTTTG ACTAACATTT 6742 .......... .......... .......... .......... .......... .......... 167 GAAGATACAT TTTTTTATCA TATTAATATG AAAAGATTGT AATTTATAGT ACTTTTCATA 6682 .......... .......... .......... .......... .......... .......... 167 TTGTTTTAGA ATATTTAATT TTTTTGGTTT AAAGTATCGA ATTAATGTGA TTTAATTTAC 6622 .......... .......... .......... .......... .......... .......... 167 CTTTAGAAAT CAATCAAAAT TGACTTTCGA TAAGCGTAAC ATGACAAATA TTTCTGGACG 6562 .......... .......... .......... .......... .......... .......... 167 GAGGGAGTAT TGATTTTTTA TCGTTGTCAT CATGGTCGTC TTTGTTTGTT GGTTCATAAT 6502 .......... .......... .......... .......... .......... .......... 167 AAGATATTCT TGAGTTTAAA TGAGATGATT GTATATTTGA GTTTAATTTT GGAACATGCA 6442 .......... .......... .......... .......... .......... .......... 167 AGAGTTTTTG GATTTGATTT TGATCGGTAG ATGTACTAGT ACCTGCCACC AAAACATCGT 6382 .......... .......... .......... .......... .......... .......... 167 GAAGGATTCA GTGAACGACT TGAAACTTAG TAACACAAGA CAATTCACTG AATGGTTGTT 6322 .......... .......... .......... .......... .......... .......... 167 GGCTCTACCG GAGGAGTCTG AAATCAACAA CGTGTAACTG CTTGGGCAGA ATAAAAGAAC 6262 .......... .......... .......... .......... .......... .......... 167 TTAAATTGTT TTAATAGAAT TTTTTAAGTA ACATTGCAAT TATTTAAGCA ATACGAACGC 6202 .......... .......... .......... .......... .......... .......... 167 CCAATTGTAT TTTATTTTAT TTTTTTATAA TAAAAGAGTT TTGGAAGTAA TGAATTTTAA 6142 .......... .......... .......... .......... .......... .......... 167 TACAATATCA ATATTTAAAT AATGTTGAAT TCTTAGCTTA GGCATTGAAT CGCAATTGAA 6082 .......... .......... .......... .......... .......... .......... 167 AGTGAAAGCC CTTTTTTGCT ATTTCAAGTT ATGAATTCAG ATACTAAAGG ATAACGTCTT 6022 .......... .......... .......... .......... .......... .......... 167 TTAGAAGGAA GATATTAATG GGGTAAGTGA TTTTTAAAAG TTGACTTTTA TATAAAATTA 5962 .......... .......... .......... .......... .......... .......... 167 TCTTCTTCTT TTTTCTTTTT CTTTTTTGTA TATCGACTCA TTTAATTATC AGTTTAACTT 5902 .......... .......... .......... .......... .......... .......... 167 AATGTTCGAA TCTTTAAGCT TTTTAATTAA TATTGAATTT ATTATTTCTT TAAACTTATA 5842 .......... .......... .......... .......... .......... .......... 167 AATTCAAATC TAAACACTTA TTAAAATTTT AATGAATTTT CATATACTAT AGTATACTTG 5782 .......... .......... .......... .......... .......... .......... 167 AAAATGTTCC AAAAGCCGCC AATAAAAAAA TATTTCCATC TGTTTGACTT ATATTATGAC 5722 .......... .......... .......... .......... .......... .......... 167 ATGTAACGAG TTGTCCCTAC AATTTTATAT TTTCAGATCT AGGTACTTTA ATATATTAAC 5662 .......... .......... .......... .......... .......... .......... 167 TAGACTAATT TTTTTTCATT ATAATTAAAA ATTTTAAGAA AAAAACTGTA CTCCAGATAT 5602 .......... .......... .......... .......... .......... .......... 167 AATTTCAATT TAAAATTAAA ATACCATATA TAAGACAAAG CATCGATCAT AGATTGTTAT 5542 .......... .......... .......... .......... .......... .......... 167 TCAGATCTTA GCCACTTCAA ACAAACAAAT GTAAAAGAAA TGTGTACAAG GCAAATTAAA 5482 .......... .......... .......... .......... .......... .......... 167 GACAATGTCC ATCTTCAAAA CAAATTTAAC AAAAAAGAGA TTGGCTCAAC TCAAGATTTC 5422 .......... .......... .......... .......... .......... .......... 167 TACTTAATTA AGCCACTTCA AGAGTATTTG TAGGAATCTC CAATGGGAAA TTTGTTGTTT 5362 .......... .......... .......... .......... .......... .......... 167 CATTGTGAGT AGAGCCATAA GGACAAAACA TAACCTTGTA GTCTGTAGTC CAACTCTGAC 5302 | |||| | |||||||| | |||| | || | |||| | | ||| | | .......... ..A-CCATTA GGACAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC 214 AAGTAAAAGT ACTTGTTGGA TCGTCTTGAG GATAACTATA GGCATCGGGA CATCTTTGTT 5242 ||||||| || || || ||| || ||||| | | || ||||| ||||| ||| |||||||||| AAGTAAATGT GCTAGTAGGA TCATCTTGTG GGTAGCTATA CGCATCAGGA CATCTTTGTT 274 TGAAAAATCT TGACAAATCG GTAGGACCAC ATGGACCTTG AGTGCAACAA TATTGTTGTC 5182 |||||||||| |||||||| ||||| |||| |||||||||| ||||||||| |||||||||| TGAAAAATCT CGACAAATCA GTAGGGCCAC ATGGACCTTG TGTGCAACAA TATTGTTGTC 334 CTCCGAATGT AGTACAAGGG TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGGCATT 5122 ||||||| || |||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CTCCGAACGT GGTACAAGGA TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGACATT 394 CACCGTTTAT ATTAGCAACA CATTGAATTG GATGACATTT TCCCGGCCCA GGGTTAGTTG 5062 |||| ||||| |||||| | || ||||||| ||| ||||| || | | || || || | CACCATTTAT ATTAGCCGTA CAATGAATTG CATGGCATTT CCCTCCACTA GGATTGGTCG 454 GGCCGAAAGA CATAGGGATG TTGAATCCAT CAATAACAGA AATGTCCCAG AAATCTAAGT 5002 || |||||| ||| || || || ||||||| | | | ||| |||||||||| ||||||| || GGGCGAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAG AAATCTAGGT 514 TGCTAAATTG ATTCAA 4986 ||||||| || | ||| TGCTAAACTG GTCCAA 530 hqPGS_C08HBa0235H18.1-_SGN-E350942- (8541 8503,5349 4986) ******************************************************************************** EST sequence 51 -strand 521 n (File: SGN-E351796-) 1 TTTTTTTTTT GTGATGATGT GACTTTTATT CATGTAATTA TATTAGGTTT ATTACAAGCC 61 AATTATATAA CTCGACTACT TCAAGCAATT TAAAAGAAAG TGACTCAATT TTACTTAGCC 121 TCTTCATCAC TTGAGGGCAT CTCCAAGGGG AAATTTGGGC TAGTAACACC ATTAGGACAA 181 AAAACAACCC TATAATTTGT ACTACCACTA GGGCAAGTAA ATGTGCTAGT AGGATCATCT 241 TGTGGGTAGC TATACGCATC AGGACATCTT TGTTTGAAAA ATCTCGACAA ATCAGTAGGG 301 CCACATGGAC CTTGTGTGCA ACAATATTGT TGTCCTCCGA ACGTGGTACA AGGATTGTTA 361 CATCCTCCGG GTACCCTAAG TGAACCAGGA CATTCACCAT TTATATTAGC CGTACAATGA 421 ATTGCATGGC ATTTCCCTCC ACTAGGATTG GTCGGGGCGA AAGTCATTGG AATATTAAAT 481 CCATCGACTA AAGAAATGTC CCAGAAATCT AGGTTGCTAA A Predicted gene structure (within gDNA segment 9560 to 3207): Exon 1 8541 8503 ( 39 n); cDNA 129 167 ( 39 n); score: 0.718 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0), Pa: 0.189 (s: 0.72) Exon 2 5349 4995 ( 355 n); cDNA 168 521 ( 354 n); score: 0.834 PPA cDNA 12 1 MATCH C08HBa0235H18.1- SGN-E351796- 0.834 394 0.756 C PGS_C08HBa0235H18.1-_SGN-E351796- (8541 8503,5349 4995) Alignment (genomic DNA sequence = upper lines): ACTTGTAGGC ATCTCCAATG GGAAATTTGT TGTTTCATTG TGAGTAGAGC CATAAGGACA 8482 ||||| ||| |||||||| | ||||||||| | | ACTTGAGGGC ATCTCCAAGG GGAAATTTGG GCTAGTAAC. .......... .......... 167 GAACATTATC TTGTAGTCTG TAGTCCAACT CTGACAAGTA AAAGTACTAG TTGGATCGTC 8422 .......... .......... .......... .......... .......... .......... 167 TTGAGGGTAA CTATAGGCAT CAGGACATCT TTGTTTGAAA AATCTTGACA ATTCAGTAGG 8362 .......... .......... .......... .......... .......... .......... 167 ACCACATGGA CCGTGATTAC AACAATATTG TTGTCCTCCG AATGTTGTAC AAGGGTTGTT 8302 .......... .......... .......... .......... .......... .......... 167 ACATCCTCCA GGTACCCTAA GTGAACCAGG GCATTCACCG TTTATATTGG CTGTGCATTG 8242 .......... .......... .......... .......... .......... .......... 167 AATTGGATGA CATTTTCCAG GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA 8182 .......... .......... .......... .......... .......... .......... 167 TCCATCAATA ACAGAAATAT CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC 8122 .......... .......... .......... .......... .......... .......... 167 AGCTAAGGTG TTTGGTGGTT TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC 8062 .......... .......... .......... .......... .......... .......... 167 AGTCTGGCAC CAACCTCTTC CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG 8002 .......... .......... .......... .......... .......... .......... 167 TGCCATTTTA GTGCCAGGTG GGGCCCAAAA CCACCAACTC TGACCTCTCT CGAGACGTCG 7942 .......... .......... .......... .......... .......... .......... 167 ACCACCTCCT ACGGGGACCG CTGCCGCCCA AACGGTGTAG GGGCAGTTGT TATGGACCTC 7882 .......... .......... .......... .......... .......... .......... 167 AAATACACCG GAACCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAAAACA CTAAACAAGT 7822 .......... .......... .......... .......... .......... .......... 167 TGTCAAGTGA CTCATTTTAG TATAAGAAGT TGTAGGATAT ATTTGCATAT CGAGCTAGGG 7762 .......... .......... .......... .......... .......... .......... 167 GTTTATATAG TGGTATGGCG GCTTTTTTTC ACTATGGACA TTAATCATAT AAATATTGGC 7702 .......... .......... .......... .......... .......... .......... 167 ACTTGTTATA AACATATATA GAAAATTAAA AAAAAAAATT GTATCCAAAA TATCTCCACT 7642 .......... .......... .......... .......... .......... .......... 167 TGAAAAAAAA AGCCGCCAAT ATAATATGAG TACAGCCTAT TATAAGTAAT ATATTTTGTT 7582 .......... .......... .......... .......... .......... .......... 167 CACTCCAGTC ATATTTCACA GTTCAACTTT TTGCTATTTT GAAAATTTAT GCATTAACAC 7522 .......... .......... .......... .......... .......... .......... 167 ATTATGATAT TTATAATGAT TAAAAAAAAA AGAGAAGATA TTTTTTAATT AAGTGATATA 7462 .......... .......... .......... .......... .......... .......... 167 TACGTATTAT TAGTTTTGTG TTTAACTATA TATTAATTTT AAATTATTTA GTTTAGTATA 7402 .......... .......... .......... .......... .......... .......... 167 TACAACAAAT CGGAAAAATG CATGGCAGGG CATGAAACCT AAAATTGTGG AAAATTTCCT 7342 .......... .......... .......... .......... .......... .......... 167 AATTTTTTTT GAACATTTTT TCATGAGAAA TTTAGTTAGT AGAGAATTCT CTTCATAATT 7282 .......... .......... .......... .......... .......... .......... 167 TTTATTGGTT ATGTTTTCAT AAATAAAATA ACTTAAAAAT TTTGAATTAC AAATTTGTAA 7222 .......... .......... .......... .......... .......... .......... 167 TTTTTGTTTA CAGACAATTG CCTTTTTTCC CTTGATTATT TTTTTCCGTC GTATATATAT 7162 .......... .......... .......... .......... .......... .......... 167 AGTGGATTTT TATATTAAAT TATTTATAGC ATATTTATCA AGTGGACATA ATAATTAATT 7102 .......... .......... .......... .......... .......... .......... 167 GAAAATGTGC ATGCATTCTA CAGTCAAAAA AGTTGAGCAA ATGGGTAGGC GTAGAGATGA 7042 .......... .......... .......... .......... .......... .......... 167 GTGGAACCTT AAAAGTTTGA ATTTTTTTTT TATTCGATAC AAGCTATGTA GGTCTTGTTT 6982 .......... .......... .......... .......... .......... .......... 167 CACACGAGAA AAATGAATTT TGAAATTAGT TATGAATTTC GTTACTAATC TATCTCTAAT 6922 .......... .......... .......... .......... .......... .......... 167 ATGCAAAGTT TTGAATAATC TATCCCTAAT TGGTTACTAG ATATAGAACT AGCAATGATT 6862 .......... .......... .......... .......... .......... .......... 167 TTTGTTATTG ATTGAATAAT TTGTTCGATA TTGATTTTTG TTTTATGTTT CCTCCGTCCG 6802 .......... .......... .......... .......... .......... .......... 167 ATATTGTTTG TTATGGTTTC TATTTATAGA CTCAAACTAT AAAAACTTTG ACTAACATTT 6742 .......... .......... .......... .......... .......... .......... 167 GAAGATACAT TTTTTTATCA TATTAATATG AAAAGATTGT AATTTATAGT ACTTTTCATA 6682 .......... .......... .......... .......... .......... .......... 167 TTGTTTTAGA ATATTTAATT TTTTTGGTTT AAAGTATCGA ATTAATGTGA TTTAATTTAC 6622 .......... .......... .......... .......... .......... .......... 167 CTTTAGAAAT CAATCAAAAT TGACTTTCGA TAAGCGTAAC ATGACAAATA TTTCTGGACG 6562 .......... .......... .......... .......... .......... .......... 167 GAGGGAGTAT TGATTTTTTA TCGTTGTCAT CATGGTCGTC TTTGTTTGTT GGTTCATAAT 6502 .......... .......... .......... .......... .......... .......... 167 AAGATATTCT TGAGTTTAAA TGAGATGATT GTATATTTGA GTTTAATTTT GGAACATGCA 6442 .......... .......... .......... .......... .......... .......... 167 AGAGTTTTTG GATTTGATTT TGATCGGTAG ATGTACTAGT ACCTGCCACC AAAACATCGT 6382 .......... .......... .......... .......... .......... .......... 167 GAAGGATTCA GTGAACGACT TGAAACTTAG TAACACAAGA CAATTCACTG AATGGTTGTT 6322 .......... .......... .......... .......... .......... .......... 167 GGCTCTACCG GAGGAGTCTG AAATCAACAA CGTGTAACTG CTTGGGCAGA ATAAAAGAAC 6262 .......... .......... .......... .......... .......... .......... 167 TTAAATTGTT TTAATAGAAT TTTTTAAGTA ACATTGCAAT TATTTAAGCA ATACGAACGC 6202 .......... .......... .......... .......... .......... .......... 167 CCAATTGTAT TTTATTTTAT TTTTTTATAA TAAAAGAGTT TTGGAAGTAA TGAATTTTAA 6142 .......... .......... .......... .......... .......... .......... 167 TACAATATCA ATATTTAAAT AATGTTGAAT TCTTAGCTTA GGCATTGAAT CGCAATTGAA 6082 .......... .......... .......... .......... .......... .......... 167 AGTGAAAGCC CTTTTTTGCT ATTTCAAGTT ATGAATTCAG ATACTAAAGG ATAACGTCTT 6022 .......... .......... .......... .......... .......... .......... 167 TTAGAAGGAA GATATTAATG GGGTAAGTGA TTTTTAAAAG TTGACTTTTA TATAAAATTA 5962 .......... .......... .......... .......... .......... .......... 167 TCTTCTTCTT TTTTCTTTTT CTTTTTTGTA TATCGACTCA TTTAATTATC AGTTTAACTT 5902 .......... .......... .......... .......... .......... .......... 167 AATGTTCGAA TCTTTAAGCT TTTTAATTAA TATTGAATTT ATTATTTCTT TAAACTTATA 5842 .......... .......... .......... .......... .......... .......... 167 AATTCAAATC TAAACACTTA TTAAAATTTT AATGAATTTT CATATACTAT AGTATACTTG 5782 .......... .......... .......... .......... .......... .......... 167 AAAATGTTCC AAAAGCCGCC AATAAAAAAA TATTTCCATC TGTTTGACTT ATATTATGAC 5722 .......... .......... .......... .......... .......... .......... 167 ATGTAACGAG TTGTCCCTAC AATTTTATAT TTTCAGATCT AGGTACTTTA ATATATTAAC 5662 .......... .......... .......... .......... .......... .......... 167 TAGACTAATT TTTTTTCATT ATAATTAAAA ATTTTAAGAA AAAAACTGTA CTCCAGATAT 5602 .......... .......... .......... .......... .......... .......... 167 AATTTCAATT TAAAATTAAA ATACCATATA TAAGACAAAG CATCGATCAT AGATTGTTAT 5542 .......... .......... .......... .......... .......... .......... 167 TCAGATCTTA GCCACTTCAA ACAAACAAAT GTAAAAGAAA TGTGTACAAG GCAAATTAAA 5482 .......... .......... .......... .......... .......... .......... 167 GACAATGTCC ATCTTCAAAA CAAATTTAAC AAAAAAGAGA TTGGCTCAAC TCAAGATTTC 5422 .......... .......... .......... .......... .......... .......... 167 TACTTAATTA AGCCACTTCA AGAGTATTTG TAGGAATCTC CAATGGGAAA TTTGTTGTTT 5362 .......... .......... .......... .......... .......... .......... 167 CATTGTGAGT AGAGCCATAA GGACAAAACA TAACCTTGTA GTCTGTAGTC CAACTCTGAC 5302 | |||| | |||||||| | |||| | || | |||| | | ||| | | .......... ..A-CCATTA GGACAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC 214 AAGTAAAAGT ACTTGTTGGA TCGTCTTGAG GATAACTATA GGCATCGGGA CATCTTTGTT 5242 ||||||| || || || ||| || ||||| | | || ||||| ||||| ||| |||||||||| AAGTAAATGT GCTAGTAGGA TCATCTTGTG GGTAGCTATA CGCATCAGGA CATCTTTGTT 274 TGAAAAATCT TGACAAATCG GTAGGACCAC ATGGACCTTG AGTGCAACAA TATTGTTGTC 5182 |||||||||| |||||||| ||||| |||| |||||||||| ||||||||| |||||||||| TGAAAAATCT CGACAAATCA GTAGGGCCAC ATGGACCTTG TGTGCAACAA TATTGTTGTC 334 CTCCGAATGT AGTACAAGGG TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGGCATT 5122 ||||||| || |||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CTCCGAACGT GGTACAAGGA TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGACATT 394 CACCGTTTAT ATTAGCAACA CATTGAATTG GATGACATTT TCCCGGCCCA GGGTTAGTTG 5062 |||| ||||| |||||| | || ||||||| ||| ||||| || | | || || || | CACCATTTAT ATTAGCCGTA CAATGAATTG CATGGCATTT CCCTCCACTA GGATTGGTCG 454 GGCCGAAAGA CATAGGGATG TTGAATCCAT CAATAACAGA AATGTCCCAG AAATCTAAGT 5002 || |||||| ||| || || || ||||||| | | | ||| |||||||||| ||||||| || GGGCGAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAG AAATCTAGGT 514 TGCTAAA 4995 ||||||| TGCTAAA 521 hqPGS_C08HBa0235H18.1-_SGN-E351796- (8541 8503,5349 4995) ******************************************************************************** EST sequence 840 +strand 520 n (File: SGN-E295085+) 1 AGAGAACTAG TCTGAGTTTT TTTTTTTTTT TTTTTGTGAT GATGTGACTT TTATTCATGT 61 AATTATATTA GGTTTATTAC AAGCCAATTA TATAACTCGA CTACTTCAAG CAATTTAAAA 121 GAAAGTGACT CAATTTTACT TAGCCTCTTC ATCACTTGAG GGCATCTCCA AGGGGAAATT 181 TGGGCTAGTA ACACCATTAG GACAAAAAAC AACCCTATAA TTTGTACTAC CACTAGGGCA 241 AGTAAATGTG CTAGTAGGAT CATCTTGTGG GTAGCTATAC GCATCAGGAC ATCTTTGTTT 301 GAAAAATCTC GACAAATCAG TAGGGCCACA TGGACCTTGT GTGCAACAAT ATTGTTGTCC 361 TCCGAACGTG GTACAAGGAT TGTTACATCC TCCGGGTACC CTAAGTGAAC CAGGACATTC 421 ACCATTTATA TTAGCCGTAC AATGAATTGC ATGGCATTTC CCTCCACTAG GATTGGTCGG 481 GGCGAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA Predicted gene structure (within gDNA segment 9200 to 3457): Exon 1 8541 8503 ( 39 n); cDNA 154 192 ( 39 n); score: 0.718 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0), Pa: 0.189 (s: 0.72) Exon 2 5349 5021 ( 329 n); cDNA 193 520 ( 328 n); score: 0.824 PPA cDNA 37 17 MATCH C08HBa0235H18.1- SGN-E295085+ 0.824 368 0.708 C PGS_C08HBa0235H18.1-_SGN-E295085+ (8541 8503,5349 5021) Alignment (genomic DNA sequence = upper lines): ACTTGTAGGC ATCTCCAATG GGAAATTTGT TGTTTCATTG TGAGTAGAGC CATAAGGACA 8482 ||||| ||| |||||||| | ||||||||| | | ACTTGAGGGC ATCTCCAAGG GGAAATTTGG GCTAGTAAC. .......... .......... 192 GAACATTATC TTGTAGTCTG TAGTCCAACT CTGACAAGTA AAAGTACTAG TTGGATCGTC 8422 .......... .......... .......... .......... .......... .......... 192 TTGAGGGTAA CTATAGGCAT CAGGACATCT TTGTTTGAAA AATCTTGACA ATTCAGTAGG 8362 .......... .......... .......... .......... .......... .......... 192 ACCACATGGA CCGTGATTAC AACAATATTG TTGTCCTCCG AATGTTGTAC AAGGGTTGTT 8302 .......... .......... .......... .......... .......... .......... 192 ACATCCTCCA GGTACCCTAA GTGAACCAGG GCATTCACCG TTTATATTGG CTGTGCATTG 8242 .......... .......... .......... .......... .......... .......... 192 AATTGGATGA CATTTTCCAG GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA 8182 .......... .......... .......... .......... .......... .......... 192 TCCATCAATA ACAGAAATAT CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC 8122 .......... .......... .......... .......... .......... .......... 192 AGCTAAGGTG TTTGGTGGTT TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC 8062 .......... .......... .......... .......... .......... .......... 192 AGTCTGGCAC CAACCTCTTC CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG 8002 .......... .......... .......... .......... .......... .......... 192 TGCCATTTTA GTGCCAGGTG GGGCCCAAAA CCACCAACTC TGACCTCTCT CGAGACGTCG 7942 .......... .......... .......... .......... .......... .......... 192 ACCACCTCCT ACGGGGACCG CTGCCGCCCA AACGGTGTAG GGGCAGTTGT TATGGACCTC 7882 .......... .......... .......... .......... .......... .......... 192 AAATACACCG GAACCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAAAACA CTAAACAAGT 7822 .......... .......... .......... .......... .......... .......... 192 TGTCAAGTGA CTCATTTTAG TATAAGAAGT TGTAGGATAT ATTTGCATAT CGAGCTAGGG 7762 .......... .......... .......... .......... .......... .......... 192 GTTTATATAG TGGTATGGCG GCTTTTTTTC ACTATGGACA TTAATCATAT AAATATTGGC 7702 .......... .......... .......... .......... .......... .......... 192 ACTTGTTATA AACATATATA GAAAATTAAA AAAAAAAATT GTATCCAAAA TATCTCCACT 7642 .......... .......... .......... .......... .......... .......... 192 TGAAAAAAAA AGCCGCCAAT ATAATATGAG TACAGCCTAT TATAAGTAAT ATATTTTGTT 7582 .......... .......... .......... .......... .......... .......... 192 CACTCCAGTC ATATTTCACA GTTCAACTTT TTGCTATTTT GAAAATTTAT GCATTAACAC 7522 .......... .......... .......... .......... .......... .......... 192 ATTATGATAT TTATAATGAT TAAAAAAAAA AGAGAAGATA TTTTTTAATT AAGTGATATA 7462 .......... .......... .......... .......... .......... .......... 192 TACGTATTAT TAGTTTTGTG TTTAACTATA TATTAATTTT AAATTATTTA GTTTAGTATA 7402 .......... .......... .......... .......... .......... .......... 192 TACAACAAAT CGGAAAAATG CATGGCAGGG CATGAAACCT AAAATTGTGG AAAATTTCCT 7342 .......... .......... .......... .......... .......... .......... 192 AATTTTTTTT GAACATTTTT TCATGAGAAA TTTAGTTAGT AGAGAATTCT CTTCATAATT 7282 .......... .......... .......... .......... .......... .......... 192 TTTATTGGTT ATGTTTTCAT AAATAAAATA ACTTAAAAAT TTTGAATTAC AAATTTGTAA 7222 .......... .......... .......... .......... .......... .......... 192 TTTTTGTTTA CAGACAATTG CCTTTTTTCC CTTGATTATT TTTTTCCGTC GTATATATAT 7162 .......... .......... .......... .......... .......... .......... 192 AGTGGATTTT TATATTAAAT TATTTATAGC ATATTTATCA AGTGGACATA ATAATTAATT 7102 .......... .......... .......... .......... .......... .......... 192 GAAAATGTGC ATGCATTCTA CAGTCAAAAA AGTTGAGCAA ATGGGTAGGC GTAGAGATGA 7042 .......... .......... .......... .......... .......... .......... 192 GTGGAACCTT AAAAGTTTGA ATTTTTTTTT TATTCGATAC AAGCTATGTA GGTCTTGTTT 6982 .......... .......... .......... .......... .......... .......... 192 CACACGAGAA AAATGAATTT TGAAATTAGT TATGAATTTC GTTACTAATC TATCTCTAAT 6922 .......... .......... .......... .......... .......... .......... 192 ATGCAAAGTT TTGAATAATC TATCCCTAAT TGGTTACTAG ATATAGAACT AGCAATGATT 6862 .......... .......... .......... .......... .......... .......... 192 TTTGTTATTG ATTGAATAAT TTGTTCGATA TTGATTTTTG TTTTATGTTT CCTCCGTCCG 6802 .......... .......... .......... .......... .......... .......... 192 ATATTGTTTG TTATGGTTTC TATTTATAGA CTCAAACTAT AAAAACTTTG ACTAACATTT 6742 .......... .......... .......... .......... .......... .......... 192 GAAGATACAT TTTTTTATCA TATTAATATG AAAAGATTGT AATTTATAGT ACTTTTCATA 6682 .......... .......... .......... .......... .......... .......... 192 TTGTTTTAGA ATATTTAATT TTTTTGGTTT AAAGTATCGA ATTAATGTGA TTTAATTTAC 6622 .......... .......... .......... .......... .......... .......... 192 CTTTAGAAAT CAATCAAAAT TGACTTTCGA TAAGCGTAAC ATGACAAATA TTTCTGGACG 6562 .......... .......... .......... .......... .......... .......... 192 GAGGGAGTAT TGATTTTTTA TCGTTGTCAT CATGGTCGTC TTTGTTTGTT GGTTCATAAT 6502 .......... .......... .......... .......... .......... .......... 192 AAGATATTCT TGAGTTTAAA TGAGATGATT GTATATTTGA GTTTAATTTT GGAACATGCA 6442 .......... .......... .......... .......... .......... .......... 192 AGAGTTTTTG GATTTGATTT TGATCGGTAG ATGTACTAGT ACCTGCCACC AAAACATCGT 6382 .......... .......... .......... .......... .......... .......... 192 GAAGGATTCA GTGAACGACT TGAAACTTAG TAACACAAGA CAATTCACTG AATGGTTGTT 6322 .......... .......... .......... .......... .......... .......... 192 GGCTCTACCG GAGGAGTCTG AAATCAACAA CGTGTAACTG CTTGGGCAGA ATAAAAGAAC 6262 .......... .......... .......... .......... .......... .......... 192 TTAAATTGTT TTAATAGAAT TTTTTAAGTA ACATTGCAAT TATTTAAGCA ATACGAACGC 6202 .......... .......... .......... .......... .......... .......... 192 CCAATTGTAT TTTATTTTAT TTTTTTATAA TAAAAGAGTT TTGGAAGTAA TGAATTTTAA 6142 .......... .......... .......... .......... .......... .......... 192 TACAATATCA ATATTTAAAT AATGTTGAAT TCTTAGCTTA GGCATTGAAT CGCAATTGAA 6082 .......... .......... .......... .......... .......... .......... 192 AGTGAAAGCC CTTTTTTGCT ATTTCAAGTT ATGAATTCAG ATACTAAAGG ATAACGTCTT 6022 .......... .......... .......... .......... .......... .......... 192 TTAGAAGGAA GATATTAATG GGGTAAGTGA TTTTTAAAAG TTGACTTTTA TATAAAATTA 5962 .......... .......... .......... .......... .......... .......... 192 TCTTCTTCTT TTTTCTTTTT CTTTTTTGTA TATCGACTCA TTTAATTATC AGTTTAACTT 5902 .......... .......... .......... .......... .......... .......... 192 AATGTTCGAA TCTTTAAGCT TTTTAATTAA TATTGAATTT ATTATTTCTT TAAACTTATA 5842 .......... .......... .......... .......... .......... .......... 192 AATTCAAATC TAAACACTTA TTAAAATTTT AATGAATTTT CATATACTAT AGTATACTTG 5782 .......... .......... .......... .......... .......... .......... 192 AAAATGTTCC AAAAGCCGCC AATAAAAAAA TATTTCCATC TGTTTGACTT ATATTATGAC 5722 .......... .......... .......... .......... .......... .......... 192 ATGTAACGAG TTGTCCCTAC AATTTTATAT TTTCAGATCT AGGTACTTTA ATATATTAAC 5662 .......... .......... .......... .......... .......... .......... 192 TAGACTAATT TTTTTTCATT ATAATTAAAA ATTTTAAGAA AAAAACTGTA CTCCAGATAT 5602 .......... .......... .......... .......... .......... .......... 192 AATTTCAATT TAAAATTAAA ATACCATATA TAAGACAAAG CATCGATCAT AGATTGTTAT 5542 .......... .......... .......... .......... .......... .......... 192 TCAGATCTTA GCCACTTCAA ACAAACAAAT GTAAAAGAAA TGTGTACAAG GCAAATTAAA 5482 .......... .......... .......... .......... .......... .......... 192 GACAATGTCC ATCTTCAAAA CAAATTTAAC AAAAAAGAGA TTGGCTCAAC TCAAGATTTC 5422 .......... .......... .......... .......... .......... .......... 192 TACTTAATTA AGCCACTTCA AGAGTATTTG TAGGAATCTC CAATGGGAAA TTTGTTGTTT 5362 .......... .......... .......... .......... .......... .......... 192 CATTGTGAGT AGAGCCATAA GGACAAAACA TAACCTTGTA GTCTGTAGTC CAACTCTGAC 5302 | |||| | |||||||| | |||| | || | |||| | | ||| | | .......... ..A-CCATTA GGACAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC 239 AAGTAAAAGT ACTTGTTGGA TCGTCTTGAG GATAACTATA GGCATCGGGA CATCTTTGTT 5242 ||||||| || || || ||| || ||||| | | || ||||| ||||| ||| |||||||||| AAGTAAATGT GCTAGTAGGA TCATCTTGTG GGTAGCTATA CGCATCAGGA CATCTTTGTT 299 TGAAAAATCT TGACAAATCG GTAGGACCAC ATGGACCTTG AGTGCAACAA TATTGTTGTC 5182 |||||||||| |||||||| ||||| |||| |||||||||| ||||||||| |||||||||| TGAAAAATCT CGACAAATCA GTAGGGCCAC ATGGACCTTG TGTGCAACAA TATTGTTGTC 359 CTCCGAATGT AGTACAAGGG TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGGCATT 5122 ||||||| || |||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CTCCGAACGT GGTACAAGGA TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGACATT 419 CACCGTTTAT ATTAGCAACA CATTGAATTG GATGACATTT TCCCGGCCCA GGGTTAGTTG 5062 |||| ||||| |||||| | || ||||||| ||| ||||| || | | || || || | CACCATTTAT ATTAGCCGTA CAATGAATTG CATGGCATTT CCCTCCACTA GGATTGGTCG 479 GGCCGAAAGA CATAGGGATG TTGAATCCAT CAATAACAGA A 5021 || |||||| ||| || || || ||||||| | | | ||| | GGGCGAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA A 520 hqPGS_C08HBa0235H18.1-_SGN-E295085+ (8541 8503,5349 5021) ******************************************************************************** EST sequence 442 -strand 498 n (File: SGN-E349779-) 1 TTTTTTTTTT TTTTTTNTTT TTCGAAACAA CATATTTGTG ATGATGTGAC TTTTATTCAT 61 GTAATTATAT TAGGTTTATT ACAAGCCAAT TATATAACTC GACTACTTCA AGCAATTTAA 121 AAGAAAGTGA CTCAATTTTA CTTAGCCTCT TCATCACTTG AGGGCATCTC CAAGGGGAAA 181 TTTGGGCTAG TAACACCATT AGGACAAAAA ACAACCCTAT AATTTGTACT ACCACTAGGG 241 CAAGTAAATG TGCTAGTAGG ATCATCTTGT GGGTAGCTAT ACGCATCAGG ACATCTTTGT 301 TTGAAAAATC TCGACAAATC AGTAGGGCCA CATGGACCTT GTGTGCAACA ATATTGTTGT 361 CCTCCGAACG TGGTACAAGG ATTGTTACAT CCTCCGGGTA CCCTAAGTGA ACCAGGACAT 421 TCACCATTTA TATTAGCCGT ACAATGAATT GCATGGCATT TCCCTCCACT AGGATTGGTC 481 GGGGCGAAAG TCATTGGA Predicted gene structure (within gDNA segment 9230 to 3707): Exon 1 8541 8503 ( 39 n); cDNA 156 194 ( 39 n); score: 0.718 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0), Pa: 0.189 (s: 0.72) Exon 2 5349 5046 ( 304 n); cDNA 195 497 ( 303 n); score: 0.832 PPA cDNA 22 1 MATCH C08HBa0235H18.1- SGN-E349779- 0.832 343 0.689 C PGS_C08HBa0235H18.1-_SGN-E349779- (8541 8503,5349 5046) Alignment (genomic DNA sequence = upper lines): ACTTGTAGGC ATCTCCAATG GGAAATTTGT TGTTTCATTG TGAGTAGAGC CATAAGGACA 8482 ||||| ||| |||||||| | ||||||||| | | ACTTGAGGGC ATCTCCAAGG GGAAATTTGG GCTAGTAAC. .......... .......... 194 GAACATTATC TTGTAGTCTG TAGTCCAACT CTGACAAGTA AAAGTACTAG TTGGATCGTC 8422 .......... .......... .......... .......... .......... .......... 194 TTGAGGGTAA CTATAGGCAT CAGGACATCT TTGTTTGAAA AATCTTGACA ATTCAGTAGG 8362 .......... .......... .......... .......... .......... .......... 194 ACCACATGGA CCGTGATTAC AACAATATTG TTGTCCTCCG AATGTTGTAC AAGGGTTGTT 8302 .......... .......... .......... .......... .......... .......... 194 ACATCCTCCA GGTACCCTAA GTGAACCAGG GCATTCACCG TTTATATTGG CTGTGCATTG 8242 .......... .......... .......... .......... .......... .......... 194 AATTGGATGA CATTTTCCAG GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA 8182 .......... .......... .......... .......... .......... .......... 194 TCCATCAATA ACAGAAATAT CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC 8122 .......... .......... .......... .......... .......... .......... 194 AGCTAAGGTG TTTGGTGGTT TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC 8062 .......... .......... .......... .......... .......... .......... 194 AGTCTGGCAC CAACCTCTTC CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG 8002 .......... .......... .......... .......... .......... .......... 194 TGCCATTTTA GTGCCAGGTG GGGCCCAAAA CCACCAACTC TGACCTCTCT CGAGACGTCG 7942 .......... .......... .......... .......... .......... .......... 194 ACCACCTCCT ACGGGGACCG CTGCCGCCCA AACGGTGTAG GGGCAGTTGT TATGGACCTC 7882 .......... .......... .......... .......... .......... .......... 194 AAATACACCG GAACCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAAAACA CTAAACAAGT 7822 .......... .......... .......... .......... .......... .......... 194 TGTCAAGTGA CTCATTTTAG TATAAGAAGT TGTAGGATAT ATTTGCATAT CGAGCTAGGG 7762 .......... .......... .......... .......... .......... .......... 194 GTTTATATAG TGGTATGGCG GCTTTTTTTC ACTATGGACA TTAATCATAT AAATATTGGC 7702 .......... .......... .......... .......... .......... .......... 194 ACTTGTTATA AACATATATA GAAAATTAAA AAAAAAAATT GTATCCAAAA TATCTCCACT 7642 .......... .......... .......... .......... .......... .......... 194 TGAAAAAAAA AGCCGCCAAT ATAATATGAG TACAGCCTAT TATAAGTAAT ATATTTTGTT 7582 .......... .......... .......... .......... .......... .......... 194 CACTCCAGTC ATATTTCACA GTTCAACTTT TTGCTATTTT GAAAATTTAT GCATTAACAC 7522 .......... .......... .......... .......... .......... .......... 194 ATTATGATAT TTATAATGAT TAAAAAAAAA AGAGAAGATA TTTTTTAATT AAGTGATATA 7462 .......... .......... .......... .......... .......... .......... 194 TACGTATTAT TAGTTTTGTG TTTAACTATA TATTAATTTT AAATTATTTA GTTTAGTATA 7402 .......... .......... .......... .......... .......... .......... 194 TACAACAAAT CGGAAAAATG CATGGCAGGG CATGAAACCT AAAATTGTGG AAAATTTCCT 7342 .......... .......... .......... .......... .......... .......... 194 AATTTTTTTT GAACATTTTT TCATGAGAAA TTTAGTTAGT AGAGAATTCT CTTCATAATT 7282 .......... .......... .......... .......... .......... .......... 194 TTTATTGGTT ATGTTTTCAT AAATAAAATA ACTTAAAAAT TTTGAATTAC AAATTTGTAA 7222 .......... .......... .......... .......... .......... .......... 194 TTTTTGTTTA CAGACAATTG CCTTTTTTCC CTTGATTATT TTTTTCCGTC GTATATATAT 7162 .......... .......... .......... .......... .......... .......... 194 AGTGGATTTT TATATTAAAT TATTTATAGC ATATTTATCA AGTGGACATA ATAATTAATT 7102 .......... .......... .......... .......... .......... .......... 194 GAAAATGTGC ATGCATTCTA CAGTCAAAAA AGTTGAGCAA ATGGGTAGGC GTAGAGATGA 7042 .......... .......... .......... .......... .......... .......... 194 GTGGAACCTT AAAAGTTTGA ATTTTTTTTT TATTCGATAC AAGCTATGTA GGTCTTGTTT 6982 .......... .......... .......... .......... .......... .......... 194 CACACGAGAA AAATGAATTT TGAAATTAGT TATGAATTTC GTTACTAATC TATCTCTAAT 6922 .......... .......... .......... .......... .......... .......... 194 ATGCAAAGTT TTGAATAATC TATCCCTAAT TGGTTACTAG ATATAGAACT AGCAATGATT 6862 .......... .......... .......... .......... .......... .......... 194 TTTGTTATTG ATTGAATAAT TTGTTCGATA TTGATTTTTG TTTTATGTTT CCTCCGTCCG 6802 .......... .......... .......... .......... .......... .......... 194 ATATTGTTTG TTATGGTTTC TATTTATAGA CTCAAACTAT AAAAACTTTG ACTAACATTT 6742 .......... .......... .......... .......... .......... .......... 194 GAAGATACAT TTTTTTATCA TATTAATATG AAAAGATTGT AATTTATAGT ACTTTTCATA 6682 .......... .......... .......... .......... .......... .......... 194 TTGTTTTAGA ATATTTAATT TTTTTGGTTT AAAGTATCGA ATTAATGTGA TTTAATTTAC 6622 .......... .......... .......... .......... .......... .......... 194 CTTTAGAAAT CAATCAAAAT TGACTTTCGA TAAGCGTAAC ATGACAAATA TTTCTGGACG 6562 .......... .......... .......... .......... .......... .......... 194 GAGGGAGTAT TGATTTTTTA TCGTTGTCAT CATGGTCGTC TTTGTTTGTT GGTTCATAAT 6502 .......... .......... .......... .......... .......... .......... 194 AAGATATTCT TGAGTTTAAA TGAGATGATT GTATATTTGA GTTTAATTTT GGAACATGCA 6442 .......... .......... .......... .......... .......... .......... 194 AGAGTTTTTG GATTTGATTT TGATCGGTAG ATGTACTAGT ACCTGCCACC AAAACATCGT 6382 .......... .......... .......... .......... .......... .......... 194 GAAGGATTCA GTGAACGACT TGAAACTTAG TAACACAAGA CAATTCACTG AATGGTTGTT 6322 .......... .......... .......... .......... .......... .......... 194 GGCTCTACCG GAGGAGTCTG AAATCAACAA CGTGTAACTG CTTGGGCAGA ATAAAAGAAC 6262 .......... .......... .......... .......... .......... .......... 194 TTAAATTGTT TTAATAGAAT TTTTTAAGTA ACATTGCAAT TATTTAAGCA ATACGAACGC 6202 .......... .......... .......... .......... .......... .......... 194 CCAATTGTAT TTTATTTTAT TTTTTTATAA TAAAAGAGTT TTGGAAGTAA TGAATTTTAA 6142 .......... .......... .......... .......... .......... .......... 194 TACAATATCA ATATTTAAAT AATGTTGAAT TCTTAGCTTA GGCATTGAAT CGCAATTGAA 6082 .......... .......... .......... .......... .......... .......... 194 AGTGAAAGCC CTTTTTTGCT ATTTCAAGTT ATGAATTCAG ATACTAAAGG ATAACGTCTT 6022 .......... .......... .......... .......... .......... .......... 194 TTAGAAGGAA GATATTAATG GGGTAAGTGA TTTTTAAAAG TTGACTTTTA TATAAAATTA 5962 .......... .......... .......... .......... .......... .......... 194 TCTTCTTCTT TTTTCTTTTT CTTTTTTGTA TATCGACTCA TTTAATTATC AGTTTAACTT 5902 .......... .......... .......... .......... .......... .......... 194 AATGTTCGAA TCTTTAAGCT TTTTAATTAA TATTGAATTT ATTATTTCTT TAAACTTATA 5842 .......... .......... .......... .......... .......... .......... 194 AATTCAAATC TAAACACTTA TTAAAATTTT AATGAATTTT CATATACTAT AGTATACTTG 5782 .......... .......... .......... .......... .......... .......... 194 AAAATGTTCC AAAAGCCGCC AATAAAAAAA TATTTCCATC TGTTTGACTT ATATTATGAC 5722 .......... .......... .......... .......... .......... .......... 194 ATGTAACGAG TTGTCCCTAC AATTTTATAT TTTCAGATCT AGGTACTTTA ATATATTAAC 5662 .......... .......... .......... .......... .......... .......... 194 TAGACTAATT TTTTTTCATT ATAATTAAAA ATTTTAAGAA AAAAACTGTA CTCCAGATAT 5602 .......... .......... .......... .......... .......... .......... 194 AATTTCAATT TAAAATTAAA ATACCATATA TAAGACAAAG CATCGATCAT AGATTGTTAT 5542 .......... .......... .......... .......... .......... .......... 194 TCAGATCTTA GCCACTTCAA ACAAACAAAT GTAAAAGAAA TGTGTACAAG GCAAATTAAA 5482 .......... .......... .......... .......... .......... .......... 194 GACAATGTCC ATCTTCAAAA CAAATTTAAC AAAAAAGAGA TTGGCTCAAC TCAAGATTTC 5422 .......... .......... .......... .......... .......... .......... 194 TACTTAATTA AGCCACTTCA AGAGTATTTG TAGGAATCTC CAATGGGAAA TTTGTTGTTT 5362 .......... .......... .......... .......... .......... .......... 194 CATTGTGAGT AGAGCCATAA GGACAAAACA TAACCTTGTA GTCTGTAGTC CAACTCTGAC 5302 | |||| | |||||||| | |||| | || | |||| | | ||| | | .......... ..A-CCATTA GGACAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC 241 AAGTAAAAGT ACTTGTTGGA TCGTCTTGAG GATAACTATA GGCATCGGGA CATCTTTGTT 5242 ||||||| || || || ||| || ||||| | | || ||||| ||||| ||| |||||||||| AAGTAAATGT GCTAGTAGGA TCATCTTGTG GGTAGCTATA CGCATCAGGA CATCTTTGTT 301 TGAAAAATCT TGACAAATCG GTAGGACCAC ATGGACCTTG AGTGCAACAA TATTGTTGTC 5182 |||||||||| |||||||| ||||| |||| |||||||||| ||||||||| |||||||||| TGAAAAATCT CGACAAATCA GTAGGGCCAC ATGGACCTTG TGTGCAACAA TATTGTTGTC 361 CTCCGAATGT AGTACAAGGG TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGGCATT 5122 ||||||| || |||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CTCCGAACGT GGTACAAGGA TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGACATT 421 CACCGTTTAT ATTAGCAACA CATTGAATTG GATGACATTT TCCCGGCCCA GGGTTAGTTG 5062 |||| ||||| |||||| | || ||||||| ||| ||||| || | | || || || | CACCATTTAT ATTAGCCGTA CAATGAATTG CATGGCATTT CCCTCCACTA GGATTGGTCG 481 GGCCGAAAGA CATAGG 5046 || |||||| ||| || GGGCGAAAGT CATTGG 497 hqPGS_C08HBa0235H18.1-_SGN-E349779- (8541 8503,5349 5046) ******************************************************************************** EST sequence 252 -strand 487 n (File: SGN-E299150-) 1 AAGTTAATAC GTAAATATCA AAATATACAT AAAATAATAT TCGAAACAAC ATATTTGTGA 61 TGATGAGACT TTTATTCATG TAATTATATT AGGTTTATTA CAAGCCAATT ATATAACTCG 121 ACTACTTCAA GCAATTTAAA AGAAAGTGAC TCAATTTTAC TTAGCCTCTT CATCACTTGA 181 GGGCATCTCC AAGGGGAAAT TTGGGCTAGT AACACCATTA GGACAAAAAA CAACCCTATA 241 ATTTGTACTA CCACTAGGGC AAGTAAATGT GCTAGTAGGA TCATCTTGTG GGTAGCTATA 301 CGCATCAGGA CATCTTTGTT TGAAAAATCT CGACAAATCA GTAGGGCCAC ATGGACCTTG 361 TGTGCAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGA TTGTTACATC CTCCGGGTAC 421 CCTAAGTGAA CCAGGACATT CACCATTTAT ATTAGCCGAA CAATGAATTG CATGGCATTT 481 CCCTCCA Predicted gene structure (within gDNA segment 9420 to 4007): Exon 1 8541 8503 ( 39 n); cDNA 175 213 ( 39 n); score: 0.718 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0), Pa: 0.189 (s: 0.72) Exon 2 5349 5078 ( 272 n); cDNA 214 483 ( 270 n); score: 0.853 MATCH C08HBa0235H18.1- SGN-E299150- 0.853 311 0.639 C PGS_C08HBa0235H18.1-_SGN-E299150- (8541 8503,5349 5078) Alignment (genomic DNA sequence = upper lines): ACTTGTAGGC ATCTCCAATG GGAAATTTGT TGTTTCATTG TGAGTAGAGC CATAAGGACA 8482 ||||| ||| |||||||| | ||||||||| | | ACTTGAGGGC ATCTCCAAGG GGAAATTTGG GCTAGTAAC. .......... .......... 213 GAACATTATC TTGTAGTCTG TAGTCCAACT CTGACAAGTA AAAGTACTAG TTGGATCGTC 8422 .......... .......... .......... .......... .......... .......... 213 TTGAGGGTAA CTATAGGCAT CAGGACATCT TTGTTTGAAA AATCTTGACA ATTCAGTAGG 8362 .......... .......... .......... .......... .......... .......... 213 ACCACATGGA CCGTGATTAC AACAATATTG TTGTCCTCCG AATGTTGTAC AAGGGTTGTT 8302 .......... .......... .......... .......... .......... .......... 213 ACATCCTCCA GGTACCCTAA GTGAACCAGG GCATTCACCG TTTATATTGG CTGTGCATTG 8242 .......... .......... .......... .......... .......... .......... 213 AATTGGATGA CATTTTCCAG GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA 8182 .......... .......... .......... .......... .......... .......... 213 TCCATCAATA ACAGAAATAT CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC 8122 .......... .......... .......... .......... .......... .......... 213 AGCTAAGGTG TTTGGTGGTT TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC 8062 .......... .......... .......... .......... .......... .......... 213 AGTCTGGCAC CAACCTCTTC CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG 8002 .......... .......... .......... .......... .......... .......... 213 TGCCATTTTA GTGCCAGGTG GGGCCCAAAA CCACCAACTC TGACCTCTCT CGAGACGTCG 7942 .......... .......... .......... .......... .......... .......... 213 ACCACCTCCT ACGGGGACCG CTGCCGCCCA AACGGTGTAG GGGCAGTTGT TATGGACCTC 7882 .......... .......... .......... .......... .......... .......... 213 AAATACACCG GAACCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAAAACA CTAAACAAGT 7822 .......... .......... .......... .......... .......... .......... 213 TGTCAAGTGA CTCATTTTAG TATAAGAAGT TGTAGGATAT ATTTGCATAT CGAGCTAGGG 7762 .......... .......... .......... .......... .......... .......... 213 GTTTATATAG TGGTATGGCG GCTTTTTTTC ACTATGGACA TTAATCATAT AAATATTGGC 7702 .......... .......... .......... .......... .......... .......... 213 ACTTGTTATA AACATATATA GAAAATTAAA AAAAAAAATT GTATCCAAAA TATCTCCACT 7642 .......... .......... .......... .......... .......... .......... 213 TGAAAAAAAA AGCCGCCAAT ATAATATGAG TACAGCCTAT TATAAGTAAT ATATTTTGTT 7582 .......... .......... .......... .......... .......... .......... 213 CACTCCAGTC ATATTTCACA GTTCAACTTT TTGCTATTTT GAAAATTTAT GCATTAACAC 7522 .......... .......... .......... .......... .......... .......... 213 ATTATGATAT TTATAATGAT TAAAAAAAAA AGAGAAGATA TTTTTTAATT AAGTGATATA 7462 .......... .......... .......... .......... .......... .......... 213 TACGTATTAT TAGTTTTGTG TTTAACTATA TATTAATTTT AAATTATTTA GTTTAGTATA 7402 .......... .......... .......... .......... .......... .......... 213 TACAACAAAT CGGAAAAATG CATGGCAGGG CATGAAACCT AAAATTGTGG AAAATTTCCT 7342 .......... .......... .......... .......... .......... .......... 213 AATTTTTTTT GAACATTTTT TCATGAGAAA TTTAGTTAGT AGAGAATTCT CTTCATAATT 7282 .......... .......... .......... .......... .......... .......... 213 TTTATTGGTT ATGTTTTCAT AAATAAAATA ACTTAAAAAT TTTGAATTAC AAATTTGTAA 7222 .......... .......... .......... .......... .......... .......... 213 TTTTTGTTTA CAGACAATTG CCTTTTTTCC CTTGATTATT TTTTTCCGTC GTATATATAT 7162 .......... .......... .......... .......... .......... .......... 213 AGTGGATTTT TATATTAAAT TATTTATAGC ATATTTATCA AGTGGACATA ATAATTAATT 7102 .......... .......... .......... .......... .......... .......... 213 GAAAATGTGC ATGCATTCTA CAGTCAAAAA AGTTGAGCAA ATGGGTAGGC GTAGAGATGA 7042 .......... .......... .......... .......... .......... .......... 213 GTGGAACCTT AAAAGTTTGA ATTTTTTTTT TATTCGATAC AAGCTATGTA GGTCTTGTTT 6982 .......... .......... .......... .......... .......... .......... 213 CACACGAGAA AAATGAATTT TGAAATTAGT TATGAATTTC GTTACTAATC TATCTCTAAT 6922 .......... .......... .......... .......... .......... .......... 213 ATGCAAAGTT TTGAATAATC TATCCCTAAT TGGTTACTAG ATATAGAACT AGCAATGATT 6862 .......... .......... .......... .......... .......... .......... 213 TTTGTTATTG ATTGAATAAT TTGTTCGATA TTGATTTTTG TTTTATGTTT CCTCCGTCCG 6802 .......... .......... .......... .......... .......... .......... 213 ATATTGTTTG TTATGGTTTC TATTTATAGA CTCAAACTAT AAAAACTTTG ACTAACATTT 6742 .......... .......... .......... .......... .......... .......... 213 GAAGATACAT TTTTTTATCA TATTAATATG AAAAGATTGT AATTTATAGT ACTTTTCATA 6682 .......... .......... .......... .......... .......... .......... 213 TTGTTTTAGA ATATTTAATT TTTTTGGTTT AAAGTATCGA ATTAATGTGA TTTAATTTAC 6622 .......... .......... .......... .......... .......... .......... 213 CTTTAGAAAT CAATCAAAAT TGACTTTCGA TAAGCGTAAC ATGACAAATA TTTCTGGACG 6562 .......... .......... .......... .......... .......... .......... 213 GAGGGAGTAT TGATTTTTTA TCGTTGTCAT CATGGTCGTC TTTGTTTGTT GGTTCATAAT 6502 .......... .......... .......... .......... .......... .......... 213 AAGATATTCT TGAGTTTAAA TGAGATGATT GTATATTTGA GTTTAATTTT GGAACATGCA 6442 .......... .......... .......... .......... .......... .......... 213 AGAGTTTTTG GATTTGATTT TGATCGGTAG ATGTACTAGT ACCTGCCACC AAAACATCGT 6382 .......... .......... .......... .......... .......... .......... 213 GAAGGATTCA GTGAACGACT TGAAACTTAG TAACACAAGA CAATTCACTG AATGGTTGTT 6322 .......... .......... .......... .......... .......... .......... 213 GGCTCTACCG GAGGAGTCTG AAATCAACAA CGTGTAACTG CTTGGGCAGA ATAAAAGAAC 6262 .......... .......... .......... .......... .......... .......... 213 TTAAATTGTT TTAATAGAAT TTTTTAAGTA ACATTGCAAT TATTTAAGCA ATACGAACGC 6202 .......... .......... .......... .......... .......... .......... 213 CCAATTGTAT TTTATTTTAT TTTTTTATAA TAAAAGAGTT TTGGAAGTAA TGAATTTTAA 6142 .......... .......... .......... .......... .......... .......... 213 TACAATATCA ATATTTAAAT AATGTTGAAT TCTTAGCTTA GGCATTGAAT CGCAATTGAA 6082 .......... .......... .......... .......... .......... .......... 213 AGTGAAAGCC CTTTTTTGCT ATTTCAAGTT ATGAATTCAG ATACTAAAGG ATAACGTCTT 6022 .......... .......... .......... .......... .......... .......... 213 TTAGAAGGAA GATATTAATG GGGTAAGTGA TTTTTAAAAG TTGACTTTTA TATAAAATTA 5962 .......... .......... .......... .......... .......... .......... 213 TCTTCTTCTT TTTTCTTTTT CTTTTTTGTA TATCGACTCA TTTAATTATC AGTTTAACTT 5902 .......... .......... .......... .......... .......... .......... 213 AATGTTCGAA TCTTTAAGCT TTTTAATTAA TATTGAATTT ATTATTTCTT TAAACTTATA 5842 .......... .......... .......... .......... .......... .......... 213 AATTCAAATC TAAACACTTA TTAAAATTTT AATGAATTTT CATATACTAT AGTATACTTG 5782 .......... .......... .......... .......... .......... .......... 213 AAAATGTTCC AAAAGCCGCC AATAAAAAAA TATTTCCATC TGTTTGACTT ATATTATGAC 5722 .......... .......... .......... .......... .......... .......... 213 ATGTAACGAG TTGTCCCTAC AATTTTATAT TTTCAGATCT AGGTACTTTA ATATATTAAC 5662 .......... .......... .......... .......... .......... .......... 213 TAGACTAATT TTTTTTCATT ATAATTAAAA ATTTTAAGAA AAAAACTGTA CTCCAGATAT 5602 .......... .......... .......... .......... .......... .......... 213 AATTTCAATT TAAAATTAAA ATACCATATA TAAGACAAAG CATCGATCAT AGATTGTTAT 5542 .......... .......... .......... .......... .......... .......... 213 TCAGATCTTA GCCACTTCAA ACAAACAAAT GTAAAAGAAA TGTGTACAAG GCAAATTAAA 5482 .......... .......... .......... .......... .......... .......... 213 GACAATGTCC ATCTTCAAAA CAAATTTAAC AAAAAAGAGA TTGGCTCAAC TCAAGATTTC 5422 .......... .......... .......... .......... .......... .......... 213 TACTTAATTA AGCCACTTCA AGAGTATTTG TAGGAATCTC CAATGGGAAA TTTGTTGTTT 5362 .......... .......... .......... .......... .......... .......... 213 CATTGTGAGT AGAGCCATAA GGACAAAACA TAACCTTGTA GTCTGTAGTC CAACTCTGAC 5302 | |||| | |||||||| | |||| | || | |||| | | ||| | | .......... ..A-CCATTA GGACAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC 260 AAGTAAAAGT ACTTGTTGGA TCGTCTTGAG GATAACTATA GGCATCGGGA CATCTTTGTT 5242 ||||||| || || || ||| || ||||| | | || ||||| ||||| ||| |||||||||| AAGTAAATGT GCTAGTAGGA TCATCTTGTG GGTAGCTATA CGCATCAGGA CATCTTTGTT 320 TGAAAAATCT TGACAAATCG GTAGGACCAC ATGGACCTTG AGTGCAACAA TATTGTTGTC 5182 |||||||||| |||||||| ||||| |||| |||||||||| ||||||||| |||||||||| TGAAAAATCT CGACAAATCA GTAGGGCCAC ATGGACCTTG TGTGCAACAA TATTGTTGTC 380 CTCCGAATGT AGTACAAGGG TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGGCATT 5122 ||||||| || |||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CTCCGAACGT GGTACAAGGA TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGACATT 440 CACCGTTTAT ATTAGCAACA CATTGAATTG GATGACATTT TCCC 5078 |||| ||||| |||||| | || ||||||| ||| || || |||| CACCATTTAT ATTAGCCGAA CAATGAATTG CATGGCA-TT TCCC 483 hqPGS_C08HBa0235H18.1-_SGN-E299150- (8541 8503,5349 5078) ******************************************************************************** EST sequence 390 -strand 464 n (File: SGN-E310129-) 1 ACATTGAATT GGATGACATT TTCCCGGCNC AGGGTTAGTT GGGCCGAAAG ACATAGGGAT 61 GTTGAATCCA TCAATAACAG AAATGTCCCA GAAATCTAAG TTGCTAAATT GATTCAAAGC 121 GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG CATTCCAAGA CTCCACCACA 181 ATCACCGGTC TGGCACCAAC CTCTACCAGC ACCATCAAAA TTGCAATTAG TACGACCCCA 241 AATACGTGCC ATTTTGGTGC CCGGTGGAGC CCAAAACCAC CAACTTTGAC CTCTCTCGAG 301 ACGTCGGCCA CCTCCTACGG GAGTCGCCGC TGCCCATACG GTGTATGGAC AGTTGTTATG 361 GACCTCAAAT ACACCGGAAG CATAAGTGTA AGTCACAAAG GCAAGGAGAA AGAACACTAA 421 ACAAGTTGTC AAATGACTCA TTTTAGAATA AAAGAAGAAT ATTT Predicted gene structure (within gDNA segment 5712 to 4039): Exon 1 5102 4639 ( 464 n); cDNA 1 464 ( 464 n); score: 0.998 MATCH C08HBa0235H18.1- SGN-E310129- 0.998 464 1.000 C PGS_C08HBa0235H18.1-_SGN-E310129- (5102 4639) Alignment (genomic DNA sequence = upper lines): ACATTGAATT GGATGACATT TTCCCGGCCC AGGGTTAGTT GGGCCGAAAG ACATAGGGAT 5043 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| ACATTGAATT GGATGACATT TTCCCGGCNC AGGGTTAGTT GGGCCGAAAG ACATAGGGAT 60 GTTGAATCCA TCAATAACAG AAATGTCCCA GAAATCTAAG TTGCTAAATT GATTCAAAGC 4983 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGAATCCA TCAATAACAG AAATGTCCCA GAAATCTAAG TTGCTAAATT GATTCAAAGC 120 GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG CATTCCAAGA CTCCACCACA 4923 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG CATTCCAAGA CTCCACCACA 180 ATCACCGGTC TGGCACCAAC CTCTACCAGC ACCATCAAAA TTGCAATTAG TACGACCCCA 4863 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCACCGGTC TGGCACCAAC CTCTACCAGC ACCATCAAAA TTGCAATTAG TACGACCCCA 240 AATACGTGCC ATTTTGGTGC CCGGTGGAGC CCAAAACCAC CAACTTTGAC CTCTCTCGAG 4803 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATACGTGCC ATTTTGGTGC CCGGTGGAGC CCAAAACCAC CAACTTTGAC CTCTCTCGAG 300 ACGTCGGCCA CCTCCTACGG GAGTCGCCGC TGCCCATACG GTGTATGGAC AGTTGTTATG 4743 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACGTCGGCCA CCTCCTACGG GAGTCGCCGC TGCCCATACG GTGTATGGAC AGTTGTTATG 360 GACCTCAAAT ACACCGGAAG CATAAGTGTA AGTCACAAAG GCAAGGAGAA AGAACACTAA 4683 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCTCAAAT ACACCGGAAG CATAAGTGTA AGTCACAAAG GCAAGGAGAA AGAACACTAA 420 ACAAGTTGTC AAATGACTCA TTTTAGAATA AAAGAAGAAT ATTT 4639 |||||||||| |||||||||| |||||||||| |||||||||| |||| ACAAGTTGTC AAATGACTCA TTTTAGAATA AAAGAAGAAT ATTT 464 hqPGS_C08HBa0235H18.1-_SGN-E310129- (5102 4639) ******************************************************************************** EST sequence 68 -strand 336 n (File: SGN-E306515-) 1 TTTATATTAG CAACACATTG AATTGGATGA CATTTTCCCG GCCCAGGGTT AGTTGGGCCG 61 AAAGACATAG GGATGTTGAA TCCATCAATA ACAGAAATGT CCCAGAAATC TAAGTTGCTA 121 AATTGATTCA AAGCGTATTC AGCTAAGGTG TTTGGTGGTT TACCCCATCC TTTGCATTCC 181 AAGACTCCAC CACAATCACC GGTCTGGCAC CAACCTCTAC CAGCACCATC AAAATTGCAA 241 TTAGTACGAC CCCAAATACG TGCCATTTTG GTGCCCGGTG GAGCCCAAAA CCACCAACTT 301 TGACCTCTCT CGAGACGTCG GCCACCTCCT ACGGGA Predicted gene structure (within gDNA segment 5726 to 4181): Exon 1 5116 4781 ( 336 n); cDNA 1 336 ( 336 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E306515- 1.000 336 1.000 C PGS_C08HBa0235H18.1-_SGN-E306515- (5116 4781) Alignment (genomic DNA sequence = upper lines): TTTATATTAG CAACACATTG AATTGGATGA CATTTTCCCG GCCCAGGGTT AGTTGGGCCG 5057 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTATATTAG CAACACATTG AATTGGATGA CATTTTCCCG GCCCAGGGTT AGTTGGGCCG 60 AAAGACATAG GGATGTTGAA TCCATCAATA ACAGAAATGT CCCAGAAATC TAAGTTGCTA 4997 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGACATAG GGATGTTGAA TCCATCAATA ACAGAAATGT CCCAGAAATC TAAGTTGCTA 120 AATTGATTCA AAGCGTATTC AGCTAAGGTG TTTGGTGGTT TACCCCATCC TTTGCATTCC 4937 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTGATTCA AAGCGTATTC AGCTAAGGTG TTTGGTGGTT TACCCCATCC TTTGCATTCC 180 AAGACTCCAC CACAATCACC GGTCTGGCAC CAACCTCTAC CAGCACCATC AAAATTGCAA 4877 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGACTCCAC CACAATCACC GGTCTGGCAC CAACCTCTAC CAGCACCATC AAAATTGCAA 240 TTAGTACGAC CCCAAATACG TGCCATTTTG GTGCCCGGTG GAGCCCAAAA CCACCAACTT 4817 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAGTACGAC CCCAAATACG TGCCATTTTG GTGCCCGGTG GAGCCCAAAA CCACCAACTT 300 TGACCTCTCT CGAGACGTCG GCCACCTCCT ACGGGA 4781 |||||||||| |||||||||| |||||||||| |||||| TGACCTCTCT CGAGACGTCG GCCACCTCCT ACGGGA 336 hqPGS_C08HBa0235H18.1-_SGN-E306515- (5116 4781) ******************************************************************************** EST sequence 418 -strand 232 n (File: SGN-E290848-) 1 TGAATCCATC AATAACAGAA ATGTCCCAGA AATCTAAGTT GCTAAATTGA TTCAAAGCGT 61 ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA TTCCAAGACT CCACCACAAT 121 CACCGGTATG GCACCAACCT CTACCAGCAC CATCAAAATT GCAATTAGTA CGACCCCAAA 181 TACGTGCCAT TTTGGTGCCC GGTGGAGCCC AAAACCACCA ACTTTGACCT CT Predicted gene structure (within gDNA segment 5650 to 4209): Exon 1 5040 4809 ( 232 n); cDNA 1 232 ( 232 n); score: 0.996 MATCH C08HBa0235H18.1- SGN-E290848- 0.996 232 1.000 C PGS_C08HBa0235H18.1-_SGN-E290848- (5040 4809) Alignment (genomic DNA sequence = upper lines): TGAATCCATC AATAACAGAA ATGTCCCAGA AATCTAAGTT GCTAAATTGA TTCAAAGCGT 4981 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAATCCATC AATAACAGAA ATGTCCCAGA AATCTAAGTT GCTAAATTGA TTCAAAGCGT 60 ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA TTCCAAGACT CCACCACAAT 4921 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA TTCCAAGACT CCACCACAAT 120 CACCGGTCTG GCACCAACCT CTACCAGCAC CATCAAAATT GCAATTAGTA CGACCCCAAA 4861 ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCGGTATG GCACCAACCT CTACCAGCAC CATCAAAATT GCAATTAGTA CGACCCCAAA 180 TACGTGCCAT TTTGGTGCCC GGTGGAGCCC AAAACCACCA ACTTTGACCT CT 4809 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || TACGTGCCAT TTTGGTGCCC GGTGGAGCCC AAAACCACCA ACTTTGACCT CT 232 hqPGS_C08HBa0235H18.1-_SGN-E290848- (5040 4809) ******************************************************************************** EST sequence 398 -strand 251 n (File: SGN-E357567-) 1 ATTTTCCAGG GCCAGGCTTA GTTGGGCCAA AAGACATAGG GATGTTGAAT CCATCAATAA 61 CAGAAATATC CCAAAAATCT AGGTTACCAA ACTGGTTCAA AGCGTATTCA GCTAAGGTGT 121 TTGGTGGTTT ACCCCATCCT TTGCAATCCA GGACTCCACC ACAATCACCA GTCTGGCACC 181 AACCTCTTCC AGCACCATCA AAGTTGCAAT TAGTACGACC CCAAATACGT GCCATTTTAG 241 TGCCAGGTGG G Predicted gene structure (within gDNA segment 5956 to 4118): Exon 1 5085 4836 ( 250 n); cDNA 1 250 ( 250 n); score: 0.928 MATCH C08HBa0235H18.1- SGN-E357567- 0.928 250 0.996 C PGS_C08HBa0235H18.1-_SGN-E357567- (5085 4836) Alignment (genomic DNA sequence = upper lines): ATTTTCCCGG CCCAGGGTTA GTTGGGCCGA AAGACATAGG GATGTTGAAT CCATCAATAA 5026 ||||||| || ||||| ||| |||||||| | |||||||||| |||||||||| |||||||||| ATTTTCCAGG GCCAGGCTTA GTTGGGCCAA AAGACATAGG GATGTTGAAT CCATCAATAA 60 CAGAAATGTC CCAGAAATCT AAGTTGCTAA ATTGATTCAA AGCGTATTCA GCTAAGGTGT 4966 ||||||| || ||| |||||| | ||| | || | || ||||| |||||||||| |||||||||| CAGAAATATC CCAAAAATCT AGGTTACCAA ACTGGTTCAA AGCGTATTCA GCTAAGGTGT 120 TTGGTGGTTT ACCCCATCCT TTGCATTCCA AGACTCCACC ACAATCACCG GTCTGGCACC 4906 |||||||||| |||||||||| ||||| |||| ||||||||| ||||||||| |||||||||| TTGGTGGTTT ACCCCATCCT TTGCAATCCA GGACTCCACC ACAATCACCA GTCTGGCACC 180 AACCTCTACC AGCACCATCA AAATTGCAAT TAGTACGACC CCAAATACGT GCCATTTTGG 4846 ||||||| || |||||||||| || ||||||| |||||||||| |||||||||| |||||||| | AACCTCTTCC AGCACCATCA AAGTTGCAAT TAGTACGACC CCAAATACGT GCCATTTTAG 240 TGCCCGGTGG 4836 |||| ||||| TGCCAGGTGG 250 hqPGS_C08HBa0235H18.1-_SGN-E357567- (5085 4836) ******************************************************************************** EST sequence 1229 +strand 666 n (File: SGN-E371327+) 1 TTTTTTTTTA GGCAGCGAAT TATACAATTG TGCATTATAC AATTGCAGTG AAATAGGATA 61 GCGAATTATA CAATTGTATA TGTATAGCGA ATTATACAAT TTTATGTTTG CTATGGAACG 121 CAATTATGCG AAGTTTGCTA TAGCATACAA ATATGAATTT TTTGTTTGCT GTATGTGAAA 181 AAAGTTGCCC AAAAATAAAT GAGAGTTAGA TTTAAATGAA ATGGACACAT TGATTTCTCG 241 TCTAAAAGCA TTAAAGGTGG TTGATTCTTA CTCGACTAAG TGCAGTAGCT TCCCCAAGTC 301 CATATAACGA ATCAATCAAC AGTGTCCGCA GTGAAGCTGG ACCTCTAGCC ATGTCCATCC 361 CTGTTTCACT TGCGACACCA AATATAGCCA ATGCAGAAGC TGTTGCTTCC ACAGCATGGG 421 ATGGATCAAC AGCGACAAAG GCAGCAATGA GGGCAGTGAC TGAACATCCA GATGCAGTAA 481 TCTTTTGCAA CATAGGCACC CCATTGTGAA CACAAACAAC CCTATCACCG TCTGTGATAT 541 AGTCAACAGC TCCAGAAACA GCGACTACAC TACCACTTTG TTGAGCGATG GACTTAGCAG 601 CTTCAACAGC ATCACTTGAA CCATGTACAC TATCCACACC CTTGGAATTT GAGTCAACAC 661 AACCCT Predicted gene structure (within gDNA segment 10915 to 3799): Exon 1 10028 9971 ( 58 n); cDNA 17 75 ( 59 n); score: 0.922 Intron 1 9970 9940 ( 31 n); Pd: 0.000 (s: 0.91), Pa: 0.000 (s: 0.87) Exon 2 9939 9841 ( 99 n); cDNA 76 175 ( 100 n); score: 0.854 Intron 2 9840 7079 (2762 n); Pd: 0.000 (s: 0.84), Pa: 0.962 (s: 0) Exon 3 7078 7062 ( 17 n); cDNA 176 192 ( 17 n); score: 0.824 Intron 3 7061 6616 ( 446 n); Pd: 0.000 (s: 0), Pa: 0.705 (s: 0) Exon 4 6615 6601 ( 15 n); cDNA 193 207 ( 15 n); score: 0.733 Intron 4 6600 5516 (1085 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0) Exon 5 5515 5494 ( 22 n); cDNA 208 229 ( 22 n); score: 0.727 MATCH C08HBa0235H18.1- SGN-E371327+ 0.879 211 0.317 C PGS_C08HBa0235H18.1-_SGN-E371327+ (10028 9971,9939 9841,7078 7062,6615 6601,5515 5494) Alignment (genomic DNA sequence = upper lines): GAATTATACA A-TATGCATT ATACAATTGC AGTGAAATAT GATAGCGAAT TATACAATTG 9970 |||||||||| | | |||||| |||||||||| ||||||||| |||||||||| ||||||||| GAATTATACA ATTGTGCATT ATACAATTGC AGTGAAATAG GATAGCGAAT TATACAATT. 75 CGGCGAAATA GGCCAGCAAA TTATACAATT GTATAT-TAT AGTGAATTAT ACAGTTTTAT 9911 |||||| ||| || ||||||| ||| |||||| .......... .......... .......... GTATATGTAT AGCGAATTAT ACAATTTTAT 105 GTTTGCTATG GAGCGTAATT ATACAAATTT TGCTATAACA CACAAATATA AATTTTTTAT 9851 |||||||||| || || |||| || | || || ||||||| || |||||||| |||||||| | GTTTGCTATG GAACGCAATT ATGCGAAGTT TGCTATAGCA TACAAATATG AATTTTTTGT 165 TTGCTATATG CGAAAGTTGT CCTAAAACAA TTAACAACAT TACTCTTGAA AATAATATTC 9791 ||||| |||| TTGCTGTATG .......... .......... .......... .......... .......... 175 TTTTGTCAAT ATAGTAAGTA ATGATGAATA ATTATTTAAC CACCAAAGTA ACATAAAAAA 9731 .......... .......... .......... .......... .......... .......... 175 CCCCACTCAC CAATATCTCC ATATACCCCC ATTTTCTTGA CTTTTTTGAG TGTAGATACA 9671 .......... .......... .......... .......... .......... .......... 175 CATACGTTTT TCTTTTAATT ATATATCCAC TTGACACATG ACATATTTTT TTATAATAAT 9611 .......... .......... .......... .......... .......... .......... 175 GGCGTGGAGT TAAAAAGTTT ACGTAATGTG AATTTAAATT ATTAAGTTAA GTTTTAAGAA 9551 .......... .......... .......... .......... .......... .......... 175 AAAAAAGAGT GAAATTATTT GAACATATTT TGTTAATGAT CAGTTATTTC AAATAAAACA 9491 .......... .......... .......... .......... .......... .......... 175 TGATAAATAT TTTAAAATGA ATTGAATATT ATGGTGCTAA GGACTTTGCT TCTTATTATC 9431 .......... .......... .......... .......... .......... .......... 175 AGGAGTGATT GCATAAAAGT CACGGAATAT GCACCATAAC GTGCTGAAAA TATGCAAAGG 9371 .......... .......... .......... .......... .......... .......... 175 GGCTGTGGTG GGATGTTAGT TTTCAATTTT TAATTTGATA TATCGAGTTT GAGCCATGAG 9311 .......... .......... .......... .......... .......... .......... 175 AGTAAATTTC TTTTCATTAT ATATAATAAG TGTTTTGCCT TCAAAGTGAA ATTTTTCGAA 9251 .......... .......... .......... .......... .......... .......... 175 TGCAAATTTA AATTTATCAA GCTCAATACA AATGTTGAAT ATCAAGAGCA TGATTAATAG 9191 .......... .......... .......... .......... .......... .......... 175 CGGAGTAATA ATTTTCATTA GAGGATTTTG AAATATGAGA AAATAAACAC ACTAACAATT 9131 .......... .......... .......... .......... .......... .......... 175 TAAAGAAAAA AAAAATTCAT TCATTAATTA ATCACTGTAT ATACATTAAA AATAATTTTA 9071 .......... .......... .......... .......... .......... .......... 175 ACTATATATA AATAAAATTA ATAATTATCT ATTTAAAAAA TTGAATAAAC CCCTTAATTC 9011 .......... .......... .......... .......... .......... .......... 175 TACGTGGCTC CACCTTAACC TTTGCATGAA ATATTCTAAA AGCCGCCTAC AAAAAAGATT 8951 .......... .......... .......... .......... .......... .......... 175 TCCACCTCGA CTAATTATTA TGTCCTATAA AGATAGCTAT CCTATATAGT AATTATAATA 8891 .......... .......... .......... .......... .......... .......... 175 GTTTATCTTG TCCCTACAAT TTTATATTTT TGATCTGATT ACGGTAGAAT GTTATCAATA 8831 .......... .......... .......... .......... .......... .......... 175 CTATTTTTCA TTCCTTTTTT TGTCTAAGGT TTAAGACTTA GATAATTAGG AATTAAAAAG 8771 .......... .......... .......... .......... .......... .......... 175 ACAAAATTAA ACGATACTCC AAATGCACTC TTGTGTGAGA ATTTTGAACA TCATGTGTAA 8711 .......... .......... .......... .......... .......... .......... 175 GACAAATTAA AGTACAATAT GTTATTGAAA TCTTAGCCAC CTCAAGATAA CAAACTAAAA 8651 .......... .......... .......... .......... .......... .......... 175 GAAATGTGGA TAATACAAAA GACAAGTAAT GAACAAAACT CAACCATTTT GAACAAGAAA 8591 .......... .......... .......... .......... .......... .......... 175 GAGGTGGCTA CACTCATGAT GAATCTACTT ATTAAGCAAC TTCAAGAGTA CTTGTAGGCA 8531 .......... .......... .......... .......... .......... .......... 175 TCTCCAATGG GAAATTTGTT GTTTCATTGT GAGTAGAGCC ATAAGGACAG AACATTATCT 8471 .......... .......... .......... .......... .......... .......... 175 TGTAGTCTGT AGTCCAACTC TGACAAGTAA AAGTACTAGT TGGATCGTCT TGAGGGTAAC 8411 .......... .......... .......... .......... .......... .......... 175 TATAGGCATC AGGACATCTT TGTTTGAAAA ATCTTGACAA TTCAGTAGGA CCACATGGAC 8351 .......... .......... .......... .......... .......... .......... 175 CGTGATTACA ACAATATTGT TGTCCTCCGA ATGTTGTACA AGGGTTGTTA CATCCTCCAG 8291 .......... .......... .......... .......... .......... .......... 175 GTACCCTAAG TGAACCAGGG CATTCACCGT TTATATTGGC TGTGCATTGA ATTGGATGAC 8231 .......... .......... .......... .......... .......... .......... 175 ATTTTCCAGG GCCAGGCTTA GTTGGGCCAA AAGACATAGG GATGTTGAAT CCATCAATAA 8171 .......... .......... .......... .......... .......... .......... 175 CAGAAATATC CCAAAAATCT AGGTTACCAA ACTGGTTCAA AGCGTATTCA GCTAAGGTGT 8111 .......... .......... .......... .......... .......... .......... 175 TTGGTGGTTT ACCCCATCCT TTGCAATCCA GGACTCCACC ACAATCACCA GTCTGGCACC 8051 .......... .......... .......... .......... .......... .......... 175 AACCTCTTCC AGCACCATCA AAGTTGCAAT TAGTACGACC CCAAATACGT GCCATTTTAG 7991 .......... .......... .......... .......... .......... .......... 175 TGCCAGGTGG GGCCCAAAAC CACCAACTCT GACCTCTCTC GAGACGTCGA CCACCTCCTA 7931 .......... .......... .......... .......... .......... .......... 175 CGGGGACCGC TGCCGCCCAA ACGGTGTAGG GGCAGTTGTT ATGGACCTCA AATACACCGG 7871 .......... .......... .......... .......... .......... .......... 175 AACCATAAGT GTAAGTCACA AAGGCAAGGA GAAAAAACAC TAAACAAGTT GTCAAGTGAC 7811 .......... .......... .......... .......... .......... .......... 175 TCATTTTAGT ATAAGAAGTT GTAGGATATA TTTGCATATC GAGCTAGGGG TTTATATAGT 7751 .......... .......... .......... .......... .......... .......... 175 GGTATGGCGG CTTTTTTTCA CTATGGACAT TAATCATATA AATATTGGCA CTTGTTATAA 7691 .......... .......... .......... .......... .......... .......... 175 ACATATATAG AAAATTAAAA AAAAAAATTG TATCCAAAAT ATCTCCACTT GAAAAAAAAA 7631 .......... .......... .......... .......... .......... .......... 175 GCCGCCAATA TAATATGAGT ACAGCCTATT ATAAGTAATA TATTTTGTTC ACTCCAGTCA 7571 .......... .......... .......... .......... .......... .......... 175 TATTTCACAG TTCAACTTTT TGCTATTTTG AAAATTTATG CATTAACACA TTATGATATT 7511 .......... .......... .......... .......... .......... .......... 175 TATAATGATT AAAAAAAAAA GAGAAGATAT TTTTTAATTA AGTGATATAT ACGTATTATT 7451 .......... .......... .......... .......... .......... .......... 175 AGTTTTGTGT TTAACTATAT ATTAATTTTA AATTATTTAG TTTAGTATAT ACAACAAATC 7391 .......... .......... .......... .......... .......... .......... 175 GGAAAAATGC ATGGCAGGGC ATGAAACCTA AAATTGTGGA AAATTTCCTA ATTTTTTTTG 7331 .......... .......... .......... .......... .......... .......... 175 AACATTTTTT CATGAGAAAT TTAGTTAGTA GAGAATTCTC TTCATAATTT TTATTGGTTA 7271 .......... .......... .......... .......... .......... .......... 175 TGTTTTCATA AATAAAATAA CTTAAAAATT TTGAATTACA AATTTGTAAT TTTTGTTTAC 7211 .......... .......... .......... .......... .......... .......... 175 AGACAATTGC CTTTTTTCCC TTGATTATTT TTTTCCGTCG TATATATATA GTGGATTTTT 7151 .......... .......... .......... .......... .......... .......... 175 ATATTAAATT ATTTATAGCA TATTTATCAA GTGGACATAA TAATTAATTG AAAATGTGCA 7091 .......... .......... .......... .......... .......... .......... 175 TGCATTCTAC AGTCAAAAAA GTTGAGCAAA TGGGTAGGCG TAGAGATGAG TGGAACCTTA 7031 | |||||| |||| ||| .......... ..TGAAAAAA GTTGCCCAA. .......... .......... .......... 192 AAAGTTTGAA TTTTTTTTTT ATTCGATACA AGCTATGTAG GTCTTGTTTC ACACGAGAAA 6971 .......... .......... .......... .......... .......... .......... 192 AATGAATTTT GAAATTAGTT ATGAATTTCG TTACTAATCT ATCTCTAATA TGCAAAGTTT 6911 .......... .......... .......... .......... .......... .......... 192 TGAATAATCT ATCCCTAATT GGTTACTAGA TATAGAACTA GCAATGATTT TTGTTATTGA 6851 .......... .......... .......... .......... .......... .......... 192 TTGAATAATT TGTTCGATAT TGATTTTTGT TTTATGTTTC CTCCGTCCGA TATTGTTTGT 6791 .......... .......... .......... .......... .......... .......... 192 TATGGTTTCT ATTTATAGAC TCAAACTATA AAAACTTTGA CTAACATTTG AAGATACATT 6731 .......... .......... .......... .......... .......... .......... 192 TTTTTATCAT ATTAATATGA AAAGATTGTA ATTTATAGTA CTTTTCATAT TGTTTTAGAA 6671 .......... .......... .......... .......... .......... .......... 192 TATTTAATTT TTTTGGTTTA AAGTATCGAA TTAATGTGAT TTAATTTACC TTTAGAAATC 6611 |||| .......... .......... .......... .......... .......... .....AAATA 197 AATCAAAATT GACTTTCGAT AAGCGTAACA TGACAAATAT TTCTGGACGG AGGGAGTATT 6551 ||| | | || AATGAGAGTT .......... .......... .......... .......... .......... 207 GATTTTTTAT CGTTGTCATC ATGGTCGTCT TTGTTTGTTG GTTCATAATA AGATATTCTT 6491 .......... .......... .......... .......... .......... .......... 207 GAGTTTAAAT GAGATGATTG TATATTTGAG TTTAATTTTG GAACATGCAA GAGTTTTTGG 6431 .......... .......... .......... .......... .......... .......... 207 ATTTGATTTT GATCGGTAGA TGTACTAGTA CCTGCCACCA AAACATCGTG AAGGATTCAG 6371 .......... .......... .......... .......... .......... .......... 207 TGAACGACTT GAAACTTAGT AACACAAGAC AATTCACTGA ATGGTTGTTG GCTCTACCGG 6311 .......... .......... .......... .......... .......... .......... 207 AGGAGTCTGA AATCAACAAC GTGTAACTGC TTGGGCAGAA TAAAAGAACT TAAATTGTTT 6251 .......... .......... .......... .......... .......... .......... 207 TAATAGAATT TTTTAAGTAA CATTGCAATT ATTTAAGCAA TACGAACGCC CAATTGTATT 6191 .......... .......... .......... .......... .......... .......... 207 TTATTTTATT TTTTTATAAT AAAAGAGTTT TGGAAGTAAT GAATTTTAAT ACAATATCAA 6131 .......... .......... .......... .......... .......... .......... 207 TATTTAAATA ATGTTGAATT CTTAGCTTAG GCATTGAATC GCAATTGAAA GTGAAAGCCC 6071 .......... .......... .......... .......... .......... .......... 207 TTTTTTGCTA TTTCAAGTTA TGAATTCAGA TACTAAAGGA TAACGTCTTT TAGAAGGAAG 6011 .......... .......... .......... .......... .......... .......... 207 ATATTAATGG GGTAAGTGAT TTTTAAAAGT TGACTTTTAT ATAAAATTAT CTTCTTCTTT 5951 .......... .......... .......... .......... .......... .......... 207 TTTCTTTTTC TTTTTTGTAT ATCGACTCAT TTAATTATCA GTTTAACTTA ATGTTCGAAT 5891 .......... .......... .......... .......... .......... .......... 207 CTTTAAGCTT TTTAATTAAT ATTGAATTTA TTATTTCTTT AAACTTATAA ATTCAAATCT 5831 .......... .......... .......... .......... .......... .......... 207 AAACACTTAT TAAAATTTTA ATGAATTTTC ATATACTATA GTATACTTGA AAATGTTCCA 5771 .......... .......... .......... .......... .......... .......... 207 AAAGCCGCCA ATAAAAAAAT ATTTCCATCT GTTTGACTTA TATTATGACA TGTAACGAGT 5711 .......... .......... .......... .......... .......... .......... 207 TGTCCCTACA ATTTTATATT TTCAGATCTA GGTACTTTAA TATATTAACT AGACTAATTT 5651 .......... .......... .......... .......... .......... .......... 207 TTTTTCATTA TAATTAAAAA TTTTAAGAAA AAAACTGTAC TCCAGATATA ATTTCAATTT 5591 .......... .......... .......... .......... .......... .......... 207 AAAATTAAAA TACCATATAT AAGACAAAGC ATCGATCATA GATTGTTATT CAGATCTTAG 5531 .......... .......... .......... .......... .......... .......... 207 CCACTTCAAA CAAACAAATG TAAAAGAAAT GTGTACA 5494 | || |||| ||||| | ||| .......... .....AGATT TAAATGAAAT GGACACA 229 hqPGS_C08HBa0235H18.1-_SGN-E371327+ (10028 9971,9939 9841,7078 7062,6615 6601,5515 5494) ******************************************************************************** EST sequence 328 -strand 595 n (File: SGN-E543853-) 1 TTGAAAAAAT CTTGACAAAT CGGTAGGACC ACATGACCCT TGAGTGCAAC AATATTGTTG 61 TCCTCCGAAT GTAGTACAAG GGTTGTTACA TCATCCGGGT ACCCTAAGTG AACCAGGGCA 121 TTCACCGTTT ATATTAGCAA CACATTGAAT TGGATGACAT TTTCCCGGCC CAGGGTTAGT 181 TGGGCCGAAA GACATAGGGA TGTTGAATCC ATCAATAACA GAAATGTCCC AGAAATCTAA 241 GTTGCTAAAT TGATTCAAAG CGTATTCAGC TAAGGTGTTT GGTGGTTTAC CCCATCCTTT 301 GCATTCCAAG ACTCCACCAC AATCACCGGT CTGGCACCAA CCTCTACCAG CACCATCAAA 361 ATTGCAATTA GTACGACCCC AAATACGTGC CATTTTGGTG CCCGGTGGAG CCCAAAACCA 421 CCAACTTTGA CCTCTCTCGA GACGTCGGCC ACCTCCTACG GGAGTCGCCG CTGCCCATAC 481 GGTGTATGGA CAGTTGTTAT GGACCTCAAA TACACCGGAA GCATAAGTGT AAGTCACAAA 541 GGCAAGGAGA AAGAACACTA AACAAGTTGT CAAATGACTC ATTTTAGAAT AAAAG Predicted gene structure (within gDNA segment 5889 to 4049): Exon 1 5243 4649 ( 595 n); cDNA 1 595 ( 595 n); score: 0.992 MATCH C08HBa0235H18.1- SGN-E543853- 0.992 595 1.000 C PGS_C08HBa0235H18.1-_SGN-E543853- (5243 4649) Alignment (genomic DNA sequence = upper lines): TTTGAAAAAT CTTGACAAAT CGGTAGGACC ACATGGACCT TGAGTGCAAC AATATTGTTG 5184 || |||||| |||||||||| |||||||||| ||||| ||| |||||||||| |||||||||| TTGAAAAAAT CTTGACAAAT CGGTAGGACC ACATGACCCT TGAGTGCAAC AATATTGTTG 60 TCCTCCGAAT GTAGTACAAG GGTTGTTACA TCCTCCGGGT ACCCTAAGTG AACCAGGGCA 5124 |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| TCCTCCGAAT GTAGTACAAG GGTTGTTACA TCATCCGGGT ACCCTAAGTG AACCAGGGCA 120 TTCACCGTTT ATATTAGCAA CACATTGAAT TGGATGACAT TTTCCCGGCC CAGGGTTAGT 5064 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCACCGTTT ATATTAGCAA CACATTGAAT TGGATGACAT TTTCCCGGCC CAGGGTTAGT 180 TGGGCCGAAA GACATAGGGA TGTTGAATCC ATCAATAACA GAAATGTCCC AGAAATCTAA 5004 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGGCCGAAA GACATAGGGA TGTTGAATCC ATCAATAACA GAAATGTCCC AGAAATCTAA 240 GTTGCTAAAT TGATTCAAAG CGTATTCAGC TAAGGTGTTT GGTGGTTTAC CCCATCCTTT 4944 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGCTAAAT TGATTCAAAG CGTATTCAGC TAAGGTGTTT GGTGGTTTAC CCCATCCTTT 300 GCATTCCAAG ACTCCACCAC AATCACCGGT CTGGCACCAA CCTCTACCAG CACCATCAAA 4884 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCATTCCAAG ACTCCACCAC AATCACCGGT CTGGCACCAA CCTCTACCAG CACCATCAAA 360 ATTGCAATTA GTACGACCCC AAATACGTGC CATTTTGGTG CCCGGTGGAG CCCAAAACCA 4824 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGCAATTA GTACGACCCC AAATACGTGC CATTTTGGTG CCCGGTGGAG CCCAAAACCA 420 CCAACTTTGA CCTCTCTCGA GACGTCGGCC ACCTCCTACG GGAGTCGCCG CTGCCCATAC 4764 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAACTTTGA CCTCTCTCGA GACGTCGGCC ACCTCCTACG GGAGTCGCCG CTGCCCATAC 480 GGTGTATGGA CAGTTGTTAT GGACCTCAAA TACACCGGAA GCATAAGTGT AAGTCACAAA 4704 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGTATGGA CAGTTGTTAT GGACCTCAAA TACACCGGAA GCATAAGTGT AAGTCACAAA 540 GGCAAGGAGA AAGAACACTA AACAAGTTGT CAAATGACTC ATTTTAGAAT AAAAG 4649 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| GGCAAGGAGA AAGAACACTA AACAAGTTGT CAAATGACTC ATTTTAGAAT AAAAG 595 hqPGS_C08HBa0235H18.1-_SGN-E543853- (5243 4649) ******************************************************************************** EST sequence 82 -strand 655 n (File: SGN-E305774-) 1 GACAAGTAAA AGTACTTGTT GGATCGTCTT GAGGATAACT ATAGGCATCG GGACATCTTT 61 GTTTGAAAAA TCTTGACAAA TCGGTAGGAC CACATGGACC TTGAGTGCAA CAATATTGTT 121 GTCCTCCGAA TGTAGTACAA GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GAACCAGGGC 181 ATTCACCGTT TATATTAGCA ACACATTGAA TTGGATGACA TTTTCCCGGC CCAGGGTTAG 241 TTGGGCCGAA AGACATAGGG ATGTTGAATC CATCAATAAC AGAAATGTCC CAGAAATCTA 301 AGTTGCTAAA TTGATTCAAA GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT 361 TGCATTCCAA GACTCCACCA CAATCACCGG TCTGGCACCA ACCTCTACCA GCACCATCAA 421 AATTGCAATT AGTACGACCC CAAATACGTG CCATTTTGGT GCCCGGTGGA GCCCAAAACC 481 ACCAACTTTG ACCTCTCTCG AGACGTCGGC CACCTCCTAC GGGAGTCGCC GCTGCCCATA 541 CGGTGTATGG ACAGTTGTTA TGGACCTCAA ATACACCGGA AGCATAAGTG TAAGTCACAA 601 AGGCAAGGAG AAACAACACT AAACAAGTTG TCAAATGACT CATTATAGAA TAAAA Predicted gene structure (within gDNA segment 5914 to 3951): Exon 1 5304 4650 ( 655 n); cDNA 1 655 ( 655 n); score: 0.997 MATCH C08HBa0235H18.1- SGN-E305774- 0.997 655 1.000 C PGS_C08HBa0235H18.1-_SGN-E305774- (5304 4650) Alignment (genomic DNA sequence = upper lines): GACAAGTAAA AGTACTTGTT GGATCGTCTT GAGGATAACT ATAGGCATCG GGACATCTTT 5245 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACAAGTAAA AGTACTTGTT GGATCGTCTT GAGGATAACT ATAGGCATCG GGACATCTTT 60 GTTTGAAAAA TCTTGACAAA TCGGTAGGAC CACATGGACC TTGAGTGCAA CAATATTGTT 5185 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTGAAAAA TCTTGACAAA TCGGTAGGAC CACATGGACC TTGAGTGCAA CAATATTGTT 120 GTCCTCCGAA TGTAGTACAA GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GAACCAGGGC 5125 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCCTCCGAA TGTAGTACAA GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GAACCAGGGC 180 ATTCACCGTT TATATTAGCA ACACATTGAA TTGGATGACA TTTTCCCGGC CCAGGGTTAG 5065 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTCACCGTT TATATTAGCA ACACATTGAA TTGGATGACA TTTTCCCGGC CCAGGGTTAG 240 TTGGGCCGAA AGACATAGGG ATGTTGAATC CATCAATAAC AGAAATGTCC CAGAAATCTA 5005 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGGCCGAA AGACATAGGG ATGTTGAATC CATCAATAAC AGAAATGTCC CAGAAATCTA 300 AGTTGCTAAA TTGATTCAAA GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT 4945 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTGCTAAA TTGATTCAAA GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT 360 TGCATTCCAA GACTCCACCA CAATCACCGG TCTGGCACCA ACCTCTACCA GCACCATCAA 4885 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCATTCCAA GACTCCACCA CAATCACCGG TCTGGCACCA ACCTCTACCA GCACCATCAA 420 AATTGCAATT AGTACGACCC CAAATACGTG CCATTTTGGT GCCCGGTGGA GCCCAAAACC 4825 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTGCAATT AGTACGACCC CAAATACGTG CCATTTTGGT GCCCGGTGGA GCCCAAAACC 480 ACCAACTTTG ACCTCTCTCG AGACGTCGGC CACCTCCTAC GGGAGTCGCC GCTGCCCATA 4765 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAACTTTG ACCTCTCTCG AGACGTCGGC CACCTCCTAC GGGAGTCGCC GCTGCCCATA 540 CGGTGTATGG ACAGTTGTTA TGGACCTCAA ATACACCGGA AGCATAAGTG TAAGTCACAA 4705 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGTGTATGG ACAGTTGTTA TGGACCTCAA ATACACCGGA AGCATAAGTG TAAGTCACAA 600 AGGCAAGGAG AAAGAACACT AAACAAGTTG TCAAATGACT CATTTTAGAA TAAAA 4650 |||||||||| ||| |||||| |||||||||| |||||||||| |||| ||||| ||||| AGGCAAGGAG AAACAACACT AAACAAGTTG TCAAATGACT CATTATAGAA TAAAA 655 hqPGS_C08HBa0235H18.1-_SGN-E305774- (5304 4650) ******************************************************************************** EST sequence 296 -strand 597 n (File: SGN-E207039-) 1 TGTTTGAAAA AATCTTGACA AATCGGTAGG ACCACATGGA CCTTAAGTGC AACAATATTG 61 TTGTCCTCCG AATGTAGTAC AAGGGTTGTT ACATCCTCCG GGTACCCTAA GTGAACCAGG 121 GCATTCACCG TTTATATTAG CAACACATTG AATTGGATGA CATTTTCCCG GCCCAGGGTT 181 AGTTGGGCCG AAAGACATAG GGATGTTGAA TCCATCAATA ACAGAAATGT CCCAGAAATC 241 TAAGTTGCTA AATTGATTCA AAGCGTATTC AGCTAAGGTG TTTGGTGGTT TACCCCATCC 301 TTTGCATTCC AAGACTCCAC CACAATCACC GGTCTGGCAC CAACCTCTAC CAGCACCATC 361 AAAATTGCAA TTAGTACGAC CCCAAATACG TGCCATTTTG GTGCCCGGTG GAGCCCAAAA 421 CCACCAACTT TGACCTCTCT CGAGACGTCG GCCACCTCCT ACGGGAGTCG CCGCTGCCCA 481 TACGGTGTAT GGACAGTTGT TATGGACCTC AAATACACCG GAAGCATAAG TGTAAGTCAC 541 AAAGGCAAGG AGAAAGAACA CTAAACAAGT TGTCAAATGA CTCATTTTAG AATAAAA Predicted gene structure (within gDNA segment 5919 to 4050): Exon 1 5245 4650 ( 596 n); cDNA 1 597 ( 597 n); score: 0.994 MATCH C08HBa0235H18.1- SGN-E207039- 0.994 596 0.998 C PGS_C08HBa0235H18.1-_SGN-E207039- (5245 4650) Alignment (genomic DNA sequence = upper lines): TGTTTGAAA- AATCTTGACA AATCGGTAGG ACCACATGGA CCTTGAGTGC AACAATATTG 5187 ||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| TGTTTGAAAA AATCTTGACA AATCGGTAGG ACCACATGGA CCTTAAGTGC AACAATATTG 60 TTGTCCTCCG AATGTAGTAC AAGGGTTGTT ACATCCTCCG GGTACCCTAA GTGAACCAGG 5127 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTCCTCCG AATGTAGTAC AAGGGTTGTT ACATCCTCCG GGTACCCTAA GTGAACCAGG 120 GCATTCACCG TTTATATTAG CAACACATTG AATTGGATGA CATTTTCCCG GCCCAGGGTT 5067 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCATTCACCG TTTATATTAG CAACACATTG AATTGGATGA CATTTTCCCG GCCCAGGGTT 180 AGTTGGGCCG AAAGACATAG GGATGTTGAA TCCATCAATA ACAGAAATGT CCCAGAAATC 5007 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTGGGCCG AAAGACATAG GGATGTTGAA TCCATCAATA ACAGAAATGT CCCAGAAATC 240 TAAGTTGCTA AATTGATTCA AAGCGTATTC AGCTAAGGTG TTTGGTGGTT TACCCCATCC 4947 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGTTGCTA AATTGATTCA AAGCGTATTC AGCTAAGGTG TTTGGTGGTT TACCCCATCC 300 TTTGCATTCC AAGACTCCAC CACAATCACC GGTCTGGCAC CAACCTCTAC CAGCACCATC 4887 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGCATTCC AAGACTCCAC CACAATCACC GGTCTGGCAC CAACCTCTAC CAGCACCATC 360 AAAATTGCAA TTAGTACGAC CCCAAATACG TGCCATTTTG GTGCCCGGTG GAGCCCAAAA 4827 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAATTGCAA TTAGTACGAC CCCAAATACG TGCCATTTTG GTGCCCGGTG GAGCCCAAAA 420 CCACCAACTT TGACCTCTCT CGAGACGTCG GCCACCTCCT ACGGGAGTCG CCGCTGCCCA 4767 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCACCAACTT TGACCTCTCT CGAGACGTCG GCCACCTCCT ACGGGAGTCG CCGCTGCCCA 480 TACGGTGTAT GGACAGTTGT TATGGACCTC AAATACACCG GAAGCATAAG TGTAAGTCAC 4707 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACGGTGTAT GGACAGTTGT TATGGACCTC AAATACACCG GAAGCATAAG TGTAAGTCAC 540 AAAGGCAAGG AGAAAGAACA CTAAACAAGT TGTCAAATGA CTCATTTTAG AATAAAA 4650 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| AAAGGCAAGG AGAAAGAACA CTAAACAAGT TGTCAAATGA CTCATTTTAG AATAAAA 597 hqPGS_C08HBa0235H18.1-_SGN-E207039- (5245 4650) ******************************************************************************** EST sequence 428 -strand 619 n (File: SGN-E209843-) 1 TAACTATAGG CATCGGGACA TCTTTGTTTG AAAAATCTTG ACAAATCGGT AGGACCACAT 61 GGACCTTGAG TGCAACAATA TTGTTGTCCT CCGAATGTAG TACAAGGGTT GTTACATCCT 121 CCGGGTACCC TAAGTGAACC AGGGCATTCA CCGTTTATAT TAGCAACACA TTGAATTGGA 181 TGACATTTTC CCGGCCCAGG GTTAGTTGGG CCGAAAGACA TAGGGATGTT GAATCCATCA 241 ATAACAGAAA TGTCCCAGAA ATCTAAGTTG CTAAATTGAT TCAAAGCGTA TTCAGCTAAG 301 GTGTTTGGTG GTTTACCCCA TCCTTTGCAT TCCAAGACTC CACCACAATC ACCGGTCTGG 361 CACCAACCTC TACCAGCACC ATCAAAATTG CAATTAGTAC GACCCCAAAT ACGTGCCATT 421 TTGGTGCCCG GTGGAGCCCA AAACCACCAA CTTTGACCTC TCTCGAGACG TCGGCCACCT 481 CCTACGGGAG TCGCCGCTGC CCATACGGTG TATGGACAGT TGTTATGGAC CTCAAATACA 541 CCGGAAGCAT AAGTGTAAGT CACAAAGGCA AGGAGAAAGA ACACTAAACA AGTTGTCAAA 601 TGACTCATTT TAGAATAAA Predicted gene structure (within gDNA segment 5879 to 4051): Exon 1 5269 4651 ( 619 n); cDNA 1 619 ( 619 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E209843- 1.000 619 1.000 C PGS_C08HBa0235H18.1-_SGN-E209843- (5269 4651) Alignment (genomic DNA sequence = upper lines): TAACTATAGG CATCGGGACA TCTTTGTTTG AAAAATCTTG ACAAATCGGT AGGACCACAT 5210 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAACTATAGG CATCGGGACA TCTTTGTTTG AAAAATCTTG ACAAATCGGT AGGACCACAT 60 GGACCTTGAG TGCAACAATA TTGTTGTCCT CCGAATGTAG TACAAGGGTT GTTACATCCT 5150 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGACCTTGAG TGCAACAATA TTGTTGTCCT CCGAATGTAG TACAAGGGTT GTTACATCCT 120 CCGGGTACCC TAAGTGAACC AGGGCATTCA CCGTTTATAT TAGCAACACA TTGAATTGGA 5090 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGGGTACCC TAAGTGAACC AGGGCATTCA CCGTTTATAT TAGCAACACA TTGAATTGGA 180 TGACATTTTC CCGGCCCAGG GTTAGTTGGG CCGAAAGACA TAGGGATGTT GAATCCATCA 5030 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACATTTTC CCGGCCCAGG GTTAGTTGGG CCGAAAGACA TAGGGATGTT GAATCCATCA 240 ATAACAGAAA TGTCCCAGAA ATCTAAGTTG CTAAATTGAT TCAAAGCGTA TTCAGCTAAG 4970 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAACAGAAA TGTCCCAGAA ATCTAAGTTG CTAAATTGAT TCAAAGCGTA TTCAGCTAAG 300 GTGTTTGGTG GTTTACCCCA TCCTTTGCAT TCCAAGACTC CACCACAATC ACCGGTCTGG 4910 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGTTTGGTG GTTTACCCCA TCCTTTGCAT TCCAAGACTC CACCACAATC ACCGGTCTGG 360 CACCAACCTC TACCAGCACC ATCAAAATTG CAATTAGTAC GACCCCAAAT ACGTGCCATT 4850 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCAACCTC TACCAGCACC ATCAAAATTG CAATTAGTAC GACCCCAAAT ACGTGCCATT 420 TTGGTGCCCG GTGGAGCCCA AAACCACCAA CTTTGACCTC TCTCGAGACG TCGGCCACCT 4790 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGTGCCCG GTGGAGCCCA AAACCACCAA CTTTGACCTC TCTCGAGACG TCGGCCACCT 480 CCTACGGGAG TCGCCGCTGC CCATACGGTG TATGGACAGT TGTTATGGAC CTCAAATACA 4730 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTACGGGAG TCGCCGCTGC CCATACGGTG TATGGACAGT TGTTATGGAC CTCAAATACA 540 CCGGAAGCAT AAGTGTAAGT CACAAAGGCA AGGAGAAAGA ACACTAAACA AGTTGTCAAA 4670 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGGAAGCAT AAGTGTAAGT CACAAAGGCA AGGAGAAAGA ACACTAAACA AGTTGTCAAA 600 TGACTCATTT TAGAATAAA 4651 |||||||||| ||||||||| TGACTCATTT TAGAATAAA 619 hqPGS_C08HBa0235H18.1-_SGN-E209843- (5269 4651) ******************************************************************************** EST sequence 182 -strand 528 n (File: SGN-E304108-) 1 CGAATGTAGT ACAAGGGTTG TTACATCCTC CGGGTACCCT AAGTGAACCA GGGCATTCAC 61 CGTTTATATT AGCAACACAT TGAATTGGAT GACATTTTCC CGGCCCAGGG TTAGTTGGGC 121 CGAAAGACAT AGGGATGTTG AATCCATCAA TAACAGAAAT GTCCCAGAAA TCTAAGTTGC 181 TAAATTGATT CAAAGCGTAT TCAGCTAAGG TGTTTGGTGG TTTACCCCAT CCTTTGCATT 241 CCAAGACTCC ACCACAATCA CCGGTCTGGC ACCAACCTCT ACCAGCACCA TCAAAATTGC 301 AATTAGTACG ACCCCAAATA CGTGCCATTT TGGTGCCCGG TGGAGCCCAA AACCACCAAC 361 TTTGACCTCT CTCGAGACGT CGGCCACCTC CTACGGGAGT CGCCGCTGCC CATACGGTGT 421 ATGGACAGTT GTTATGGACC TCAAATACAC CGGAAGCATA AGTGTAAGTC ACAAAGGCAA 481 GGAGAAAGAA CACTAAACAA GTTGTCAAAT GACTCATTTT AGAATAAA Predicted gene structure (within gDNA segment 5788 to 4051): Exon 1 5178 4651 ( 528 n); cDNA 1 528 ( 528 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E304108- 1.000 528 1.000 C PGS_C08HBa0235H18.1-_SGN-E304108- (5178 4651) Alignment (genomic DNA sequence = upper lines): CGAATGTAGT ACAAGGGTTG TTACATCCTC CGGGTACCCT AAGTGAACCA GGGCATTCAC 5119 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGAATGTAGT ACAAGGGTTG TTACATCCTC CGGGTACCCT AAGTGAACCA GGGCATTCAC 60 CGTTTATATT AGCAACACAT TGAATTGGAT GACATTTTCC CGGCCCAGGG TTAGTTGGGC 5059 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTTATATT AGCAACACAT TGAATTGGAT GACATTTTCC CGGCCCAGGG TTAGTTGGGC 120 CGAAAGACAT AGGGATGTTG AATCCATCAA TAACAGAAAT GTCCCAGAAA TCTAAGTTGC 4999 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGAAAGACAT AGGGATGTTG AATCCATCAA TAACAGAAAT GTCCCAGAAA TCTAAGTTGC 180 TAAATTGATT CAAAGCGTAT TCAGCTAAGG TGTTTGGTGG TTTACCCCAT CCTTTGCATT 4939 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAATTGATT CAAAGCGTAT TCAGCTAAGG TGTTTGGTGG TTTACCCCAT CCTTTGCATT 240 CCAAGACTCC ACCACAATCA CCGGTCTGGC ACCAACCTCT ACCAGCACCA TCAAAATTGC 4879 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAAGACTCC ACCACAATCA CCGGTCTGGC ACCAACCTCT ACCAGCACCA TCAAAATTGC 300 AATTAGTACG ACCCCAAATA CGTGCCATTT TGGTGCCCGG TGGAGCCCAA AACCACCAAC 4819 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTAGTACG ACCCCAAATA CGTGCCATTT TGGTGCCCGG TGGAGCCCAA AACCACCAAC 360 TTTGACCTCT CTCGAGACGT CGGCCACCTC CTACGGGAGT CGCCGCTGCC CATACGGTGT 4759 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGACCTCT CTCGAGACGT CGGCCACCTC CTACGGGAGT CGCCGCTGCC CATACGGTGT 420 ATGGACAGTT GTTATGGACC TCAAATACAC CGGAAGCATA AGTGTAAGTC ACAAAGGCAA 4699 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGACAGTT GTTATGGACC TCAAATACAC CGGAAGCATA AGTGTAAGTC ACAAAGGCAA 480 GGAGAAAGAA CACTAAACAA GTTGTCAAAT GACTCATTTT AGAATAAA 4651 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| GGAGAAAGAA CACTAAACAA GTTGTCAAAT GACTCATTTT AGAATAAA 528 hqPGS_C08HBa0235H18.1-_SGN-E304108- (5178 4651) ******************************************************************************** EST sequence 349 -strand 452 n (File: SGN-E310823-) 1 ACATTGAATT GGATGACATT TTCCCGGCCC AGGGTTAGTT GGGCCGAAAG ACATAGGGAT 61 GTTGAATCCA TCAATAACAG AAATGTCCCA GAAATCTAAG TTGCTAAATT GATTCAAAGC 121 GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG CATTCCAAGA CTCCACCACA 181 ATCACCGGTC TGGCACCAAC CTCTACCAGC ACCATCAAAA TTGCAATTAG TACGACCCCA 241 AATACGTGCC ATTTTGGTGC CCGGTGGAGC CCAAAACCAC CAACTTTGAC CTCTCTCGAG 301 ACGTCGGCCA CCTCCTACGG GAGTCGCCGC TGCCCATACG GTGTATGGAC AGTTGTTATG 361 GACCTCAAAT ACACCGGAAG CATAAGTGTA AGTCACAAAG GCAAGGAGAA AGAACACTAA 421 ACAAGTTGTC AAATGACTCA TTTTAGAATA AA Predicted gene structure (within gDNA segment 5712 to 4051): Exon 1 5102 4651 ( 452 n); cDNA 1 452 ( 452 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E310823- 1.000 452 1.000 C PGS_C08HBa0235H18.1-_SGN-E310823- (5102 4651) Alignment (genomic DNA sequence = upper lines): ACATTGAATT GGATGACATT TTCCCGGCCC AGGGTTAGTT GGGCCGAAAG ACATAGGGAT 5043 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATTGAATT GGATGACATT TTCCCGGCCC AGGGTTAGTT GGGCCGAAAG ACATAGGGAT 60 GTTGAATCCA TCAATAACAG AAATGTCCCA GAAATCTAAG TTGCTAAATT GATTCAAAGC 4983 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGAATCCA TCAATAACAG AAATGTCCCA GAAATCTAAG TTGCTAAATT GATTCAAAGC 120 GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG CATTCCAAGA CTCCACCACA 4923 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG CATTCCAAGA CTCCACCACA 180 ATCACCGGTC TGGCACCAAC CTCTACCAGC ACCATCAAAA TTGCAATTAG TACGACCCCA 4863 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCACCGGTC TGGCACCAAC CTCTACCAGC ACCATCAAAA TTGCAATTAG TACGACCCCA 240 AATACGTGCC ATTTTGGTGC CCGGTGGAGC CCAAAACCAC CAACTTTGAC CTCTCTCGAG 4803 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATACGTGCC ATTTTGGTGC CCGGTGGAGC CCAAAACCAC CAACTTTGAC CTCTCTCGAG 300 ACGTCGGCCA CCTCCTACGG GAGTCGCCGC TGCCCATACG GTGTATGGAC AGTTGTTATG 4743 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACGTCGGCCA CCTCCTACGG GAGTCGCCGC TGCCCATACG GTGTATGGAC AGTTGTTATG 360 GACCTCAAAT ACACCGGAAG CATAAGTGTA AGTCACAAAG GCAAGGAGAA AGAACACTAA 4683 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCTCAAAT ACACCGGAAG CATAAGTGTA AGTCACAAAG GCAAGGAGAA AGAACACTAA 420 ACAAGTTGTC AAATGACTCA TTTTAGAATA AA 4651 |||||||||| |||||||||| |||||||||| || ACAAGTTGTC AAATGACTCA TTTTAGAATA AA 452 hqPGS_C08HBa0235H18.1-_SGN-E310823- (5102 4651) ******************************************************************************** EST sequence 131 -strand 436 n (File: SGN-E301999-) 1 CATTTTCCCG GCCCAGGGTT AGTTGGGCCG AAAGACATAG GGATGTTGAA TCCATCAATA 61 ACAGAAATGT CCCAGAAATC TAAGTTGCTA AATTGATTCA AAGCGTATTC AGCTAAGGTG 121 TTTGGTGGTT TACCCCATCC TTTGCATTCC AAGACTCCAC CACAATCACC GGTCTGGCAC 181 CAACCTCTAC CAGCACCATC AAAATTGCAA TTAGTACGAC CCCAAATACG TGCCATTTTG 241 GTGCCCGGTG GAGCCCAAAA CCACCAACTT TGACCTCTCT CGAGACGTCG GCCACCTCTT 301 ACGGGAGTCG CCGCTGCCCA TACGGTGTAT GGACAGTTGT TATGGACCTC AAATACACCG 361 GAAGCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAGAACA CTAAACAAGT TGTCAAATGA 421 CTCATTTTAG AATAAA Predicted gene structure (within gDNA segment 5696 to 4051): Exon 1 5086 4651 ( 436 n); cDNA 1 436 ( 436 n); score: 0.998 MATCH C08HBa0235H18.1- SGN-E301999- 0.998 436 1.000 C PGS_C08HBa0235H18.1-_SGN-E301999- (5086 4651) Alignment (genomic DNA sequence = upper lines): CATTTTCCCG GCCCAGGGTT AGTTGGGCCG AAAGACATAG GGATGTTGAA TCCATCAATA 5027 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTTTCCCG GCCCAGGGTT AGTTGGGCCG AAAGACATAG GGATGTTGAA TCCATCAATA 60 ACAGAAATGT CCCAGAAATC TAAGTTGCTA AATTGATTCA AAGCGTATTC AGCTAAGGTG 4967 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAGAAATGT CCCAGAAATC TAAGTTGCTA AATTGATTCA AAGCGTATTC AGCTAAGGTG 120 TTTGGTGGTT TACCCCATCC TTTGCATTCC AAGACTCCAC CACAATCACC GGTCTGGCAC 4907 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGGTGGTT TACCCCATCC TTTGCATTCC AAGACTCCAC CACAATCACC GGTCTGGCAC 180 CAACCTCTAC CAGCACCATC AAAATTGCAA TTAGTACGAC CCCAAATACG TGCCATTTTG 4847 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACCTCTAC CAGCACCATC AAAATTGCAA TTAGTACGAC CCCAAATACG TGCCATTTTG 240 GTGCCCGGTG GAGCCCAAAA CCACCAACTT TGACCTCTCT CGAGACGTCG GCCACCTCCT 4787 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | GTGCCCGGTG GAGCCCAAAA CCACCAACTT TGACCTCTCT CGAGACGTCG GCCACCTCTT 300 ACGGGAGTCG CCGCTGCCCA TACGGTGTAT GGACAGTTGT TATGGACCTC AAATACACCG 4727 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACGGGAGTCG CCGCTGCCCA TACGGTGTAT GGACAGTTGT TATGGACCTC AAATACACCG 360 GAAGCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAGAACA CTAAACAAGT TGTCAAATGA 4667 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAGAACA CTAAACAAGT TGTCAAATGA 420 CTCATTTTAG AATAAA 4651 |||||||||| |||||| CTCATTTTAG AATAAA 436 hqPGS_C08HBa0235H18.1-_SGN-E301999- (5086 4651) ******************************************************************************** EST sequence 247 -strand 584 n (File: SGN-E268610-) 1 GAAAAATCTT GACAAATCGG TAGGACCACA TGGACCTTGA GTGCAACAAT ATTGTTGTCC 61 TCCGAATGTA GTACAAGGGT TGTTACATCC TCCGGGTACC TTAAGTGAAC CAGGGCATTC 121 ACCGTTTATA TTAGCAACAC ATTGAATTGG ATGACATTTT CCCGGCCCAG GGTTAGTTGG 181 GCCGAAAGAC ATAGGGATGT TGAATCCATC AATAACAGAA ATGTCCCAGA AATCTAAGTT 241 GCTAAATTGA TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA 301 TTCCAAGACT CCACCACAAT CACCGGTCTG GCACCAACCT CTACCAGCAC CATCAAAATT 361 GCAATTAGTA CGACCCCAAA TACGTGCCAT TTTGGTGCCC GGTGGAGCCC AAAACCACCA 421 ACTTTGACCT CTCTCGAGAC GTCGGCCACC TCCTACGGGA GTCGCCGCTG CCCATACGGT 481 GTATGGACAG TTGTTATGGA CCTCAAATAC ACCGGAAGCA TAAGTGTAAG TCACAAAGCG 541 CAAGGAGAAA GAACACTAAA CAAGTTGTCA AATGACTCAT TTTA Predicted gene structure (within gDNA segment 5850 to 4058): Exon 1 5240 4658 ( 583 n); cDNA 1 584 ( 584 n); score: 0.994 MATCH C08HBa0235H18.1- SGN-E268610- 0.994 583 0.998 C PGS_C08HBa0235H18.1-_SGN-E268610- (5240 4658) Alignment (genomic DNA sequence = upper lines): GAAAAATCTT GACAAATCGG TAGGACCACA TGGACCTTGA GTGCAACAAT ATTGTTGTCC 5181 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAAAATCTT GACAAATCGG TAGGACCACA TGGACCTTGA GTGCAACAAT ATTGTTGTCC 60 TCCGAATGTA GTACAAGGGT TGTTACATCC TCCGGGTACC CTAAGTGAAC CAGGGCATTC 5121 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| TCCGAATGTA GTACAAGGGT TGTTACATCC TCCGGGTACC TTAAGTGAAC CAGGGCATTC 120 ACCGTTTATA TTAGCAACAC ATTGAATTGG ATGACATTTT CCCGGCCCAG GGTTAGTTGG 5061 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCGTTTATA TTAGCAACAC ATTGAATTGG ATGACATTTT CCCGGCCCAG GGTTAGTTGG 180 GCCGAAAGAC ATAGGGATGT TGAATCCATC AATAACAGAA ATGTCCCAGA AATCTAAGTT 5001 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCGAAAGAC ATAGGGATGT TGAATCCATC AATAACAGAA ATGTCCCAGA AATCTAAGTT 240 GCTAAATTGA TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA 4941 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTAAATTGA TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA 300 TTCCAAGACT CCACCACAAT CACCGGTCTG GCACCAACCT CTACCAGCAC CATCAAAATT 4881 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCAAGACT CCACCACAAT CACCGGTCTG GCACCAACCT CTACCAGCAC CATCAAAATT 360 GCAATTAGTA CGACCCCAAA TACGTGCCAT TTTGGTGCCC GGTGGAGCCC AAAACCACCA 4821 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAATTAGTA CGACCCCAAA TACGTGCCAT TTTGGTGCCC GGTGGAGCCC AAAACCACCA 420 ACTTTGACCT CTCTCGAGAC GTCGGCCACC TCCTACGGGA GTCGCCGCTG CCCATACGGT 4761 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTTGACCT CTCTCGAGAC GTCGGCCACC TCCTACGGGA GTCGCCGCTG CCCATACGGT 480 GTATGGACAG TTGTTATGGA CCTCAAATAC ACCGGAAGCA TAAGTGTAAG TCACAAAG-G 4702 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | GTATGGACAG TTGTTATGGA CCTCAAATAC ACCGGAAGCA TAAGTGTAAG TCACAAAGCG 540 CAAGGAGAAA GAACACTAAA CAAGTTGTCA AATGACTCAT TTTA 4658 |||||||||| |||||||||| |||||||||| |||||||||| |||| CAAGGAGAAA GAACACTAAA CAAGTTGTCA AATGACTCAT TTTA 584 hqPGS_C08HBa0235H18.1-_SGN-E268610- (5240 4658) ******************************************************************************** EST sequence 91 -strand 566 n (File: SGN-E305497-) 1 CAGTAGGACC ACATGGCCCG TGATTACATC AATATTGTTG TCCTCCGAAT GTTGTACAAG 61 GGTTGTTACA TCCTCCAGGT ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTGGCTG 121 TGCATTGAAT TGGATGACAT TTTCCAGGGC CAGGCTTAGT TGGGCCAAAA GACATAGGGA 181 TGTTGAATCC ATCAATAACA GAAATATCCC AAAAATCTAG GTTACCAAAC TGGTTCAAAG 241 CGTATTCAGC TAAGGTGTTT GGTGGTTTAC CCCATCCTTT GCAATCCAGG ACTCCACCAC 301 AATCACCAGT CTGGCACCAA CCTCTTCCAG CACCATCAAA GTTGCAATTA GTACGACCCC 361 AAATACGTGC CATTTTAGTG CCAGGTGGGG CCCAAAACCA CCAACTCTGA CCTCTCTCGA 421 GACGTCGACC ACCTCCTACG GGGACCGCTG CCGCCCAAAC GGTGTAGGGG CAGTTGTTAT 481 GGACCTCAAA TACACCGGAA CCATAAGTGT AAGTCACAAA GGCAAGGAGA AAAAACACTA 541 AACAAGTTGT CAAGTGACTC ATTTTA Predicted gene structure (within gDNA segment 6094 to 3941): Exon 1 5221 4658 ( 564 n); cDNA 3 566 ( 564 n); score: 0.922 MATCH C08HBa0235H18.1- SGN-E305497- 0.922 564 0.996 C PGS_C08HBa0235H18.1-_SGN-E305497- (5221 4658) Alignment (genomic DNA sequence = upper lines): GTAGGACCAC ATGGACCTTG AGTGCAACAA TATTGTTGTC CTCCGAATGT AGTACAAGGG 5162 |||||||||| |||| || || | | || ||| |||||||||| |||||||||| ||||||||| GTAGGACCAC ATGGCCCGTG ATTACATCAA TATTGTTGTC CTCCGAATGT TGTACAAGGG 62 TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGGCATT CACCGTTTAT ATTAGCAACA 5102 |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| ||| || TTGTTACATC CTCCAGGTAC CCTAAGTGAA CCAGGGCATT CACCGTTTAT ATTGGCTGTG 122 CATTGAATTG GATGACATTT TCCCGGCCCA GGGTTAGTTG GGCCGAAAGA CATAGGGATG 5042 |||||||||| |||||||||| ||| || ||| || ||||||| |||| ||||| |||||||||| CATTGAATTG GATGACATTT TCCAGGGCCA GGCTTAGTTG GGCCAAAAGA CATAGGGATG 182 TTGAATCCAT CAATAACAGA AATGTCCCAG AAATCTAAGT TGCTAAATTG ATTCAAAGCG 4982 |||||||||| |||||||||| ||| ||||| ||||||| || | | ||| || ||||||||| TTGAATCCAT CAATAACAGA AATATCCCAA AAATCTAGGT TACCAAACTG GTTCAAAGCG 242 TATTCAGCTA AGGTGTTTGG TGGTTTACCC CATCCTTTGC ATTCCAAGAC TCCACCACAA 4922 |||||||||| |||||||||| |||||||||| |||||||||| | |||| ||| |||||||||| TATTCAGCTA AGGTGTTTGG TGGTTTACCC CATCCTTTGC AATCCAGGAC TCCACCACAA 302 TCACCGGTCT GGCACCAACC TCTACCAGCA CCATCAAAAT TGCAATTAGT ACGACCCCAA 4862 ||||| |||| |||||||||| ||| |||||| |||||||| | |||||||||| |||||||||| TCACCAGTCT GGCACCAACC TCTTCCAGCA CCATCAAAGT TGCAATTAGT ACGACCCCAA 362 ATACGTGCCA TTTTGGTGCC CGGTGGAGCC CAAAACCACC AACTTTGACC TCTCTCGAGA 4802 |||||||||| |||| ||||| ||||| ||| |||||||||| |||| ||||| |||||||||| ATACGTGCCA TTTTAGTGCC AGGTGGGGCC CAAAACCACC AACTCTGACC TCTCTCGAGA 422 CGTCGGCCAC CTCCTACGGG AGTCGCCGCT GCCCATACGG TGTATGGACA GTTGTTATGG 4742 ||||| |||| |||||||||| ||| || ||||| |||| |||| || || |||||||||| CGTCGACCAC CTCCTACGGG GACCGCTGCC GCCCAAACGG TGTAGGGGCA GTTGTTATGG 482 ACCTCAAATA CACCGGAAGC ATAAGTGTAA GTCACAAAGG CAAGGAGAAA GAACACTAAA 4682 |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| ||||||||| ACCTCAAATA CACCGGAACC ATAAGTGTAA GTCACAAAGG CAAGGAGAAA AAACACTAAA 542 CAAGTTGTCA AATGACTCAT TTTA 4658 |||||||||| | |||||||| |||| CAAGTTGTCA AGTGACTCAT TTTA 566 hqPGS_C08HBa0235H18.1-_SGN-E305497- (5221 4658) ******************************************************************************** EST sequence 98 -strand 481 n (File: SGN-E305272-) 1 AAGTGAACCA GGGCATTCAC CGTTTATATT GGCTGTGCAT TGAATTGGAT GACATTTTCC 61 AGGGCCAGGC TTAGTTGGGC CAAAAGACAT AGGGATGTTG AATCCATCAA TAACAGAAAT 121 ATCCCAAAAA TCTAGGTTAC CAAACTGGTT CAAAGCGTAT TCAGCTAAGG TGTTTGGTGG 181 TTTACCCCAT CCTTTGCAAT CCAGGACTCC ACCACAATCA CCAGTCTGGC ACCAACCTCT 241 TCCAGCACCA TCAAAGTTGC AATTAGTACG ACCCCAAATA CGTGCCATTT TAGTGCCAGG 301 TGGGGCCCAA AACCACCAAC TCTGACCTCT CTCGAGACGT CGACCACCTC CTACGGGGAC 361 CGCTGCCGCC CAAACGGTGT AGGGGCAGTT GTTATGGACC TCAAATACAC CGGAACCATA 421 AGTGTAAGTC ACAAAGGCAA GGAGAAAAAA CACTAAACAA GTTGTCAAGT GACTCATTTT 481 A Predicted gene structure (within gDNA segment 5748 to 3941): Exon 1 5138 4658 ( 481 n); cDNA 1 481 ( 481 n); score: 0.923 MATCH C08HBa0235H18.1- SGN-E305272- 0.923 481 1.000 C PGS_C08HBa0235H18.1-_SGN-E305272- (5138 4658) Alignment (genomic DNA sequence = upper lines): AAGTGAACCA GGGCATTCAC CGTTTATATT AGCAACACAT TGAATTGGAT GACATTTTCC 5079 |||||||||| |||||||||| |||||||||| || ||| |||||||||| |||||||||| AAGTGAACCA GGGCATTCAC CGTTTATATT GGCTGTGCAT TGAATTGGAT GACATTTTCC 60 CGGCCCAGGG TTAGTTGGGC CGAAAGACAT AGGGATGTTG AATCCATCAA TAACAGAAAT 5019 || ||||| |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| AGGGCCAGGC TTAGTTGGGC CAAAAGACAT AGGGATGTTG AATCCATCAA TAACAGAAAT 120 GTCCCAGAAA TCTAAGTTGC TAAATTGATT CAAAGCGTAT TCAGCTAAGG TGTTTGGTGG 4959 ||||| ||| |||| ||| | ||| || || |||||||||| |||||||||| |||||||||| ATCCCAAAAA TCTAGGTTAC CAAACTGGTT CAAAGCGTAT TCAGCTAAGG TGTTTGGTGG 180 TTTACCCCAT CCTTTGCATT CCAAGACTCC ACCACAATCA CCGGTCTGGC ACCAACCTCT 4899 |||||||||| |||||||| | ||| |||||| |||||||||| || ||||||| |||||||||| TTTACCCCAT CCTTTGCAAT CCAGGACTCC ACCACAATCA CCAGTCTGGC ACCAACCTCT 240 ACCAGCACCA TCAAAATTGC AATTAGTACG ACCCCAAATA CGTGCCATTT TGGTGCCCGG 4839 ||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| | ||||| || TCCAGCACCA TCAAAGTTGC AATTAGTACG ACCCCAAATA CGTGCCATTT TAGTGCCAGG 300 TGGAGCCCAA AACCACCAAC TTTGACCTCT CTCGAGACGT CGGCCACCTC CTACGGGAGT 4779 ||| |||||| |||||||||| | |||||||| |||||||||| || ||||||| ||||||| TGGGGCCCAA AACCACCAAC TCTGACCTCT CTCGAGACGT CGACCACCTC CTACGGGGAC 360 CGCCGCTGCC CATACGGTGT ATGGACAGTT GTTATGGACC TCAAATACAC CGGAAGCATA 4719 ||| || ||| || ||||||| | || ||||| |||||||||| |||||||||| ||||| |||| CGCTGCCGCC CAAACGGTGT AGGGGCAGTT GTTATGGACC TCAAATACAC CGGAACCATA 420 AGTGTAAGTC ACAAAGGCAA GGAGAAAGAA CACTAAACAA GTTGTCAAAT GACTCATTTT 4659 |||||||||| |||||||||| ||||||| || |||||||||| |||||||| | |||||||||| AGTGTAAGTC ACAAAGGCAA GGAGAAAAAA CACTAAACAA GTTGTCAAGT GACTCATTTT 480 A 4658 | A 481 hqPGS_C08HBa0235H18.1-_SGN-E305272- (5138 4658) ******************************************************************************** EST sequence 205 -strand 429 n (File: SGN-E306238-) 1 CATTTTCCAG GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA TCCATCAATA 61 ACAGAAATAT CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC AGCTAAGGTG 121 TTTGGTGGTT TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC AGTCTGGCAC 181 CAACCTCTTC CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG TGCCATTTTA 241 GTGCCAGGTG GGGCCCAAAA CCACCAACTC TGACCTCTCT CGAGACGTCG ACCACCTCCT 301 ACGGGGACCG CTGCCGCCCA AACGGTGTAG GGGCAGTTGT TATGGACTTC AAATACACCG 361 GAACCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAAAACA CTAAACAAGT TGTCAAGTGA 421 CTCATTTTA Predicted gene structure (within gDNA segment 5966 to 3941): Exon 1 5086 4658 ( 429 n); cDNA 1 429 ( 429 n); score: 0.923 MATCH C08HBa0235H18.1- SGN-E306238- 0.923 429 1.000 C PGS_C08HBa0235H18.1-_SGN-E306238- (5086 4658) Alignment (genomic DNA sequence = upper lines): CATTTTCCCG GCCCAGGGTT AGTTGGGCCG AAAGACATAG GGATGTTGAA TCCATCAATA 5027 |||||||| | | ||||| || ||||||||| |||||||||| |||||||||| |||||||||| CATTTTCCAG GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA TCCATCAATA 60 ACAGAAATGT CCCAGAAATC TAAGTTGCTA AATTGATTCA AAGCGTATTC AGCTAAGGTG 4967 |||||||| | |||| ||||| || ||| | | || || |||| |||||||||| |||||||||| ACAGAAATAT CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC AGCTAAGGTG 120 TTTGGTGGTT TACCCCATCC TTTGCATTCC AAGACTCCAC CACAATCACC GGTCTGGCAC 4907 |||||||||| |||||||||| |||||| ||| | |||||||| |||||||||| ||||||||| TTTGGTGGTT TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC AGTCTGGCAC 180 CAACCTCTAC CAGCACCATC AAAATTGCAA TTAGTACGAC CCCAAATACG TGCCATTTTG 4847 |||||||| | |||||||||| ||| |||||| |||||||||| |||||||||| ||||||||| CAACCTCTTC CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG TGCCATTTTA 240 GTGCCCGGTG GAGCCCAAAA CCACCAACTT TGACCTCTCT CGAGACGTCG GCCACCTCCT 4787 ||||| |||| | |||||||| ||||||||| |||||||||| |||||||||| ||||||||| GTGCCAGGTG GGGCCCAAAA CCACCAACTC TGACCTCTCT CGAGACGTCG ACCACCTCCT 300 ACGGGAGTCG CCGCTGCCCA TACGGTGTAT GGACAGTTGT TATGGACCTC AAATACACCG 4727 ||||| || | || ||||| |||||||| || ||||||| ||||||| || |||||||||| ACGGGGACCG CTGCCGCCCA AACGGTGTAG GGGCAGTTGT TATGGACTTC AAATACACCG 360 GAAGCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAGAACA CTAAACAAGT TGTCAAATGA 4667 ||| |||||| |||||||||| |||||||||| ||||| |||| |||||||||| |||||| ||| GAACCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAAAACA CTAAACAAGT TGTCAAGTGA 420 CTCATTTTA 4658 ||||||||| CTCATTTTA 429 hqPGS_C08HBa0235H18.1-_SGN-E306238- (5086 4658) ******************************************************************************** EST sequence 335 -strand 400 n (File: SGN-E267258-) 1 AAAAGACATA GGGATGTTGA ATCCATCAAT AACAGAAATA TCCCAAAAAT CTAGGTTACC 61 AAACTGGTTC AAAGCGTATT CAGCTAAGGT GTTTGGTGGT TTACCCCATC CTTTGCAATC 121 CAGGACTCCA CCACAATCAC CAGTCTGGCA CCAACCTCTT CCAGCACCAT CAAAGTTGCA 181 ATTAGTACGA CCCCAAATAC GTGCCATTTT AGTGCCAGGT GGGGCCCAAA ACCACCAACT 241 CTGACCTCTC TCGAGACGTC GACCACCTCC TACGGGGACC GCTGCCGCCC AAACGGTGTA 301 GGGGCAGTTG TTATGGACCT CAAATACACC GGAACCATAA GTGTAAGTCA CAAAGGCAAG 361 GAGAAAAAAC ACTAAACAAG TTGTCAAGTA ACTCATTTTA Predicted gene structure (within gDNA segment 5676 to 3941): Exon 1 5056 4658 ( 399 n); cDNA 2 400 ( 399 n); score: 0.927 MATCH C08HBa0235H18.1- SGN-E267258- 0.927 399 0.998 C PGS_C08HBa0235H18.1-_SGN-E267258- (5056 4658) Alignment (genomic DNA sequence = upper lines): AAAGACATAG GGATGTTGAA TCCATCAATA ACAGAAATGT CCCAGAAATC TAAGTTGCTA 4997 |||||||||| |||||||||| |||||||||| |||||||| | |||| ||||| || ||| | | AAAGACATAG GGATGTTGAA TCCATCAATA ACAGAAATAT CCCAAAAATC TAGGTTACCA 61 AATTGATTCA AAGCGTATTC AGCTAAGGTG TTTGGTGGTT TACCCCATCC TTTGCATTCC 4937 || || |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| AACTGGTTCA AAGCGTATTC AGCTAAGGTG TTTGGTGGTT TACCCCATCC TTTGCAATCC 121 AAGACTCCAC CACAATCACC GGTCTGGCAC CAACCTCTAC CAGCACCATC AAAATTGCAA 4877 | |||||||| |||||||||| ||||||||| |||||||| | |||||||||| ||| |||||| AGGACTCCAC CACAATCACC AGTCTGGCAC CAACCTCTTC CAGCACCATC AAAGTTGCAA 181 TTAGTACGAC CCCAAATACG TGCCATTTTG GTGCCCGGTG GAGCCCAAAA CCACCAACTT 4817 |||||||||| |||||||||| ||||||||| ||||| |||| | |||||||| ||||||||| TTAGTACGAC CCCAAATACG TGCCATTTTA GTGCCAGGTG GGGCCCAAAA CCACCAACTC 241 TGACCTCTCT CGAGACGTCG GCCACCTCCT ACGGGAGTCG CCGCTGCCCA TACGGTGTAT 4757 |||||||||| |||||||||| ||||||||| ||||| || | || ||||| |||||||| TGACCTCTCT CGAGACGTCG ACCACCTCCT ACGGGGACCG CTGCCGCCCA AACGGTGTAG 301 GGACAGTTGT TATGGACCTC AAATACACCG GAAGCATAAG TGTAAGTCAC AAAGGCAAGG 4697 || ||||||| |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| GGGCAGTTGT TATGGACCTC AAATACACCG GAACCATAAG TGTAAGTCAC AAAGGCAAGG 361 AGAAAGAACA CTAAACAAGT TGTCAAATGA CTCATTTTA 4658 ||||| |||| |||||||||| |||||| | | ||||||||| AGAAAAAACA CTAAACAAGT TGTCAAGTAA CTCATTTTA 400 hqPGS_C08HBa0235H18.1-_SGN-E267258- (5056 4658) ******************************************************************************** EST sequence 439 -strand 646 n (File: SGN-E294134-) 1 AGGGCAAGTA AATGTGCTAG TAGGATCATC TTGTGGGTAG CTATACGCAT CAGGACATCT 61 TTGTTTGAAA AATCTCGCCA AATCAGTAGG GCCACATGGA CCTTGTGTGC AACAATATTG 121 TTGTCCTCCG AACGTGGTAC AAGGATTGTT ACATCCTCCG GGTACCCTAA GTGAACCAGG 181 ACATTCACCA TTTATATTAG CCGTACAATG AATTGCATGG CATTTCCCTC CACTAGGATT 241 GGTCGGGGCG AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC 301 TAGGTTGCTA AACTGGTCCA AGGCGTACTC GGCCAGGGTG TTTGGTGGTT TGCCCCACCC 361 GGTACATTGC AAGACCCCAC CACAATCACC AGTCTGACAT GAACCTCTAC CAGCACCATC 421 AAAGTTGCAA TTCGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GTGCATTGAT 481 GACCCATGTT TGGCCTCGAT CAAGACGTCG ACCACCGCCT ATTGGGGTCG ACGCCGCCCA 541 GACGGTGTAT GGACAGTTGT TGCGTACCTC GAAAGTGGCA GCATAAGTGT AAGTCACAAA 601 AGCAAGAAGG AAGAAAACAA AAGAAGATCT CAAGTAGGCC ATGTTT Predicted gene structure (within gDNA segment 6870 to 1): Exon 1 5302 4659 ( 644 n); cDNA 5 645 ( 641 n); score: 0.814 MATCH C08HBa0235H18.1- SGN-E294134- 0.814 644 0.997 C PGS_C08HBa0235H18.1-_SGN-E294134- (5302 4659) Alignment (genomic DNA sequence = upper lines): CAAGTAAAAG TACTTGTTGG ATCGTCTTGA GGATAACTAT AGGCATCGGG ACATCTTTGT 5243 |||||||| | | || || || ||| ||||| || || |||| | ||||| || |||||||||| CAAGTAAATG TGCTAGTAGG ATCATCTTGT GGGTAGCTAT ACGCATCAGG ACATCTTTGT 64 TTGAAAAATC TTGACAAATC GGTAGGACCA CATGGACCTT GAGTGCAACA ATATTGTTGT 5183 |||||||||| | | |||||| ||||| ||| |||||||||| | |||||||| |||||||||| TTGAAAAATC TCGCCAAATC AGTAGGGCCA CATGGACCTT GTGTGCAACA ATATTGTTGT 124 CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA CCCTAAGTGA ACCAGGGCAT 5123 |||||||| | | |||||||| ||||||||| |||||||||| |||||||||| |||||| ||| CCTCCGAACG TGGTACAAGG ATTGTTACAT CCTCCGGGTA CCCTAAGTGA ACCAGGACAT 184 TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT TTCCCGGCCC AGGGTTAGTT 5063 ||||| |||| ||||||| ||| |||||| | ||| |||| | || | ||| || || TCACCATTTA TATTAGCCGT ACAATGAATT GCATGGCATT TCCCTCCACT AGGATTGGTC 244 GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG AAATGTCCCA GAAATCTAAG 5003 ||| |||||| ||| || || || |||||| || | | || |||||||||| |||||||| | GGGGCGAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA GAAATCTAGG 304 TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG 4943 |||||||| | | | ||| || ||| || || | |||||||| ||||||| || ||| || | TTGCTAAACT GGTCCAAGGC GTACTCGGCC AGGGTGTTTG GTGGTTTGCC CCACCCGGTA 364 CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC CTCTACCAGC ACCATCAAAA 4883 |||| ||||| | |||||||| |||||| ||| || || ||| |||||||||| ||||||||| CATTGCAAGA CCCCACCACA ATCACCAGTC TGACATGAAC CTCTACCAGC ACCATCAAAG 424 TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC CCGGTGGAGC CCAAAACCAC 4823 |||||||| | |||||||||| ||||||||| || || |||| || || || | | TTGCAATTCG TACGACCCCA TATACGTGCC ATCTTAGTGC CCCTCGGTGC ATTGATGACC 484 CAACTTTGAC CTCTCTCGAG ACGTCGGCCA CCTCCTACGG GAGTCGCCGC TGCCCATACG 4763 || |||| | ||| || || |||||| ||| || |||| | | |||| ||| ||||| ||| CATGTTTGGC CTCGATCAAG ACGTCGACCA CCGCCTATTG GGGTCGACGC CGCCCAGACG 544 GTGTATGGAC AGTTGTTATG GACCTCAAAT ACACCGGAAG CATAAGTGTA AGTCACAAAG 4703 |||||||||| ||||||| | ||||| | | | || || |||||||||| ||||||||| GTGTATGGAC AGTTGTTGCG TACCTC-GA- A-AGTGGCAG CATAAGTGTA AGTCACAAAA 601 GCAAGGAGAA AGAACACTAA ACAAGTTGTC AAATGACTCA TTTT 4659 ||||| || | |||| || || | ||| | || || | || | || GCAAGAAGGA AGAAAACAAA AGAAGATCTC AAGTAGGCCA TGTT 645 hqPGS_C08HBa0235H18.1-_SGN-E294134- (5302 4659) ******************************************************************************** EST sequence 129 -strand 639 n (File: SGN-E335205-) 1 GGCAAGTAAA TGTGTTAGTA GGATCATCTT GTGGGTAGCT ATACGCATCA GGACATCTTT 61 GTTTGAAAAA TCTCGACAAA TCAGTAGGGC CACATGGACC TTGTGTGCAA CAATATTGTT 121 GTCCTCCGAA CGTGGTACAA GGATTGTTAC ATCCTCCGGG TACCCTAAGT GAACCAGGAC 181 ATTCACCATT TATATTAGCC GTACAATGAA TTGCATGGCA TTTCCCTCCA CTAGGATTGG 241 TCGGGGCGAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAGAAATCTA 301 GGTTGCTAAA CTGGTCCAAG GCGTACTCGG CCAGGGTGTT TGGTGGTTTG CCCCACCCGG 361 TACATTGCAA GACCCCACCA CAATCACCAG TCTGACATGA ACCTCTACCA GCACCATCAA 421 AGTTGCAATT CGTACGACCC CATATACGTG CCATCTTAGT GCCCCTCGGT GCATTGATGA 481 CCCATGTTTG GCCTCGATCA AGACGTCGAC CACCGCCTAT TGGGGTCGAC GCCGCCCAGA 541 CGGTGTATGG ACAGTTGTTG CGTACCTCGA AAGTGGCAGC ATAAGTGTAA GTCACAAAAG 601 CAAGAAGGAA GAAAACAAAA GAAGATCTCA AGTAGGCCA Predicted gene structure (within gDNA segment 6850 to 1): Exon 1 5302 4663 ( 640 n); cDNA 3 639 ( 637 n); score: 0.814 MATCH C08HBa0235H18.1- SGN-E335205- 0.814 640 1.002 C PGS_C08HBa0235H18.1-_SGN-E335205- (5302 4663) Alignment (genomic DNA sequence = upper lines): CAAGTAAAAG TACTTGTTGG ATCGTCTTGA GGATAACTAT AGGCATCGGG ACATCTTTGT 5243 |||||||| | | | || || ||| ||||| || || |||| | ||||| || |||||||||| CAAGTAAATG TGTTAGTAGG ATCATCTTGT GGGTAGCTAT ACGCATCAGG ACATCTTTGT 62 TTGAAAAATC TTGACAAATC GGTAGGACCA CATGGACCTT GAGTGCAACA ATATTGTTGT 5183 |||||||||| | |||||||| ||||| ||| |||||||||| | |||||||| |||||||||| TTGAAAAATC TCGACAAATC AGTAGGGCCA CATGGACCTT GTGTGCAACA ATATTGTTGT 122 CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA CCCTAAGTGA ACCAGGGCAT 5123 |||||||| | | |||||||| ||||||||| |||||||||| |||||||||| |||||| ||| CCTCCGAACG TGGTACAAGG ATTGTTACAT CCTCCGGGTA CCCTAAGTGA ACCAGGACAT 182 TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT TTCCCGGCCC AGGGTTAGTT 5063 ||||| |||| ||||||| ||| |||||| | ||| |||| | || | ||| || || TCACCATTTA TATTAGCCGT ACAATGAATT GCATGGCATT TCCCTCCACT AGGATTGGTC 242 GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG AAATGTCCCA GAAATCTAAG 5003 ||| |||||| ||| || || || |||||| || | | || |||||||||| |||||||| | GGGGCGAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA GAAATCTAGG 302 TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG 4943 |||||||| | | | ||| || ||| || || | |||||||| ||||||| || ||| || | TTGCTAAACT GGTCCAAGGC GTACTCGGCC AGGGTGTTTG GTGGTTTGCC CCACCCGGTA 362 CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC CTCTACCAGC ACCATCAAAA 4883 |||| ||||| | |||||||| |||||| ||| || || ||| |||||||||| ||||||||| CATTGCAAGA CCCCACCACA ATCACCAGTC TGACATGAAC CTCTACCAGC ACCATCAAAG 422 TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC CCGGTGGAGC CCAAAACCAC 4823 |||||||| | |||||||||| ||||||||| || || |||| || || || | | TTGCAATTCG TACGACCCCA TATACGTGCC ATCTTAGTGC CCCTCGGTGC ATTGATGACC 482 CAACTTTGAC CTCTCTCGAG ACGTCGGCCA CCTCCTACGG GAGTCGCCGC TGCCCATACG 4763 || |||| | ||| || || |||||| ||| || |||| | | |||| ||| ||||| ||| CATGTTTGGC CTCGATCAAG ACGTCGACCA CCGCCTATTG GGGTCGACGC CGCCCAGACG 542 GTGTATGGAC AGTTGTTATG GACCTCAAAT ACACCGGAAG CATAAGTGTA AGTCACAAAG 4703 |||||||||| ||||||| | ||||| | | | || || |||||||||| ||||||||| GTGTATGGAC AGTTGTTGCG TACCTC-GA- A-AGTGGCAG CATAAGTGTA AGTCACAAAA 599 GCAAGGAGAA AGAACACTAA ACAAGTTGTC AAATGACTCA 4663 ||||| || | |||| || || | ||| | || || | || GCAAGAAGGA AGAAAACAAA AGAAGATCTC AAGTAGGCCA 639 hqPGS_C08HBa0235H18.1-_SGN-E335205- (5302 4663) ******************************************************************************** EST sequence 48 -strand 719 n (File: SGN-E210966-) 1 CATCAGTACT GCAGGGCATC TCCAAGGGAA ATTTGGATCA GCACNACCAT TAGGACAAAA 61 GACAACCCTA TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG 121 TGGGTAGCTA TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC 181 ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 241 TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 301 TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 361 ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 421 TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 481 CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC 541 CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 601 ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT 661 AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATGTCA Predicted gene structure (within gDNA segment 10912 to 3026): Exon 1 5403 4672 ( 732 n); cDNA 1 719 ( 719 n); score: 0.775 MATCH C08HBa0235H18.1- SGN-E210966- 0.775 732 1.018 C PGS_C08HBa0235H18.1-_SGN-E210966- (5403 4672) Alignment (genomic DNA sequence = upper lines): CAAGAGTATT TGTAGGAATC TCCAATGGGA AATTTGTTGT TTCATTGTGA GTAGAGCCAT 5344 || |||| | || ||| ||||| |||| |||||| | ||| | | | |||| CATCAGTACT GCAGGGCATC TCCAA-GGGA AATTTG--G- ATCA--G-CA --CNA-CCAT 50 AAGGACAAAA CATAACCTTG TAGTCTGTAG TCCAACTCTG ACAAGTAAAA GTACTTGTTG 5284 ||||||||| | |||| | |||| |||| | | || | |||||||| || ||||| | TAGGACAAAA GACAACCCTA TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG 110 GATCGTCTTG AGGATAACTA TAGGCATCGG GACATCTTTG TTTGAAAAAT CTTGACAAAT 5224 |||||||||| || || ||| || ||||||| ||||||||| ||||||||| | ||||| | GATCGTCTTG TGGGTAGCTA TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT 170 CGGTAGGACC ACATGGACCT TGAGTGCAAC AATATTGTTG TCCTCCGAAT GTAGTACAAG 5164 | ||||| || |||||||||| || ||||||| |||||||||| |||||| || || ||||||| CTGTAGGGCC ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG 230 GGTTGTTACA TCCTCCGGGT ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTAGCAA 5104 |||||||||| |||||| ||| ||| |||| | | ||| || |||||| ||| ||||| || GGTTGTTACA TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG 290 CACATTGAAT TGGATGACAT TTTCCCGGCC CAGGGTTAGT TGGGCCGAAA GACATAGGGA 5044 || ||||| || |||||| ||||| | ||| || || |||| | ||| | ||| || | TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 350 TGTTGAATCC ATCAATAACA GAAATGTCCC AGAAATCTAA GTTGCTAAAT TGATTCAAAG 4984 | || ||||| ||| | | | |||||||||| | |||||||| ||||||||| || | ||| | TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 410 CGTATTCAGC TAAGGTGTTT GGTGGTTTAC CCCATCCTTT GCATTCCAAG ACTCCACCAC 4924 |||| || || || ||||||| || ||||| | ||||||| | || | ||| |||||||||| CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 470 AATCACCGGT CTGGCACCAA CCTCTACCAG CACCATCAAA ATTGCAATTA GTACGACCCC 4864 ||||||| || ||| || | ||||| || | || ||| ||| |||||| | |||||||||| AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 530 AAATACGTGC CATTTTGGTG CCCGGTGGAG CCCAAAACCA CCAACTTTGA CCTCTCTCGA 4804 | |||||||| ||| || || ||| |||| | | ||| |||| |||| | || ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 590 GACGTCGGCC ACCTCCTACG GGAGTCGCCG CTGCCCATAC GGTGTATGGA CAGTTGTTAT 4744 ||||||| || ||| |||| ||||||| | | ||||| || |||||||||| |||||||| GACGTCGACC ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC 650 GGACCTCAAA TACACCGGAA GCATAAGTGT AAGTCACAAA GGCAAGGAGA AAGAACACTA 4684 | ||||| || | | || | |||||||| | |||||||| | ||||| |||| || | GTACCTC-AA T--AGTGGCA GCATAAGTAT AAGTCACACA AAGAAGGAAG AAGAGAACAA 707 AACAAGTTGT CA 4672 || ||| ||| || AAGAAGATGT CA 719 hqPGS_C08HBa0235H18.1-_SGN-E210966- (5403 4672) ******************************************************************************** EST sequence 175 -strand 703 n (File: SGN-E213606-) 1 ATTTCCAAGG GGAAATTTGG ATCAGCAACA CCATTAGGAC AAAAGACAAC CCTATAGTTT 61 GTACTACCAC CAGGGCAAGT AAATGTGCTT GTAGGATCGT CTTGTGGGTA GCTATAAGCA 121 TCGGGACATC TTTTCTTGAA AAATTTGGAC AACTCTGTAG GGCCACATGG ACCTTGGGTG 181 CAACAATATT GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA 241 AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 301 CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 361 TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT 421 TTGCCCCATC CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG 481 CCTGCAGCAT TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC 541 GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC 601 GATGCCGCCC AAACGGTGTA TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA 661 TAAGTCACAC AAAGAAGGAA GAAGAGAACA AAAGAAGATG TCA Predicted gene structure (within gDNA segment 10752 to 3026): Exon 1 5386 4672 ( 715 n); cDNA 1 703 ( 703 n); score: 0.780 MATCH C08HBa0235H18.1- SGN-E213606- 0.780 715 1.017 C PGS_C08HBa0235H18.1-_SGN-E213606- (5386 4672) Alignment (genomic DNA sequence = upper lines): ATCTCCAATG GGAAATTTGT TGTTTCATTG TGAGTAGAGC CATAAGGACA AAACATAACC 5327 || ||||| | ||||||||| | ||| | | | | | ||| |||||| ||| | |||| ATTTCCAAGG GGAAATTTG- -G-ATCA--G -CA--ACA-C CATTAGGACA AAAGACAACC 51 TTGTAGTCTG TAGTCCAACT CTGACAAGTA AAAGTACTTG TTGGATCGTC TTGAGGATAA 5267 | |||| || || | | || | |||||| || || |||| | |||||||| ||| || || CTATAGTTTG TACTACCACC AGGGCAAGTA AATGTGCTTG TAGGATCGTC TTGTGGGTAG 111 CTATAGGCAT CGGGACATCT TTGTTTGAAA AATCTTGACA AATCGGTAGG ACCACATGGA 5207 ||||| |||| |||||||||| || |||||| ||| | |||| | || ||||| ||||||||| CTATAAGCAT CGGGACATCT TTTCTTGAAA AATTTGGACA ACTCTGTAGG GCCACATGGA 171 CCTTGAGTGC AACAATATTG TTGTCCTCCG AATGTAGTAC AAGGGTTGTT ACATCCTCCG 5147 ||||| |||| |||||||||| ||||||||| || || |||| |||||||||| ||||||||| CCTTGGGTGC AACAATATTG TTGTCCTCCA AACGTGGTAC AAGGGTTGTT ACATCCTCCA 231 GGTACCCTAA GTGAACCAGG GCATTCACCG TTTATATTAG CAACACATTG AATTGGATGA 5087 |||||| ||| | | | ||| |||||||| |||||||| | | || || ||||| ||| GGTACCTTAA GGGCGCGAGG ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA 291 CATTTTCCCG GCCCAGGGTT AGTTGGGCCG AAAGACATAG GGATGTTGAA TCCATCAATA 5027 |||||||| | ||| || |||||| | |||| ||| | | || || || |||||| | CATTTTCCTC CACTAGGTTT TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT 351 ACAGAAATGT CCCAGAAATC TAAGTTGCTA AATTGATTCA AAGCGTATTC AGCTAAGGTG 4967 | |||||||| |||| ||||| |||||||||| || || | || | ||||| || |||| |||| AAAGAAATGT CCCAAAAATC TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG 411 TTTGGTGGTT TACCCCATCC TTTGCATTCC AAGACTCCAC CACAATCACC GGTCTGGCAC 4907 ||||| |||| | |||||||| | || | |||||||||| |||||||||| ||||| || TTTGGGGGTT TGCCCCATCC GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT 471 CAACCTCTAC CAGCACCATC AAAATTGCAA TTAGTACGAC CCCAAATACG TGCCATTTTG 4847 |||||| | | ||| ||| ||| |||||| |||||||| |||| ||||| |||||| || GTACCTCTGC CTGCAGCATT AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA 531 GTGCCCGGTG GAGCCCAAAA CCACCAACTT TGACCTCTCT CGAGACGTCG GCCACCTCCT 4787 || ||| | |||| | ||| || || |||| | ||||||||| ||||| ||| GTTCCCCTCG GAGCATTGAT GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT 591 ACGGGAGTCG CCGCTGCCCA TACGGTGTAT GGACAGTTGT TATGGACCTC AAATACACCG 4727 | ||||||| || ||||| ||||||||| |||||||||| | | ||||| ||| | | ATCGGAGTCG ATGCCGCCCA AACGGTGTAT GGACAGTTGT TGCGTACCTC -AAT--AGTG 648 GAAGCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAGAACA CTAAACAAGT TGTCA 4672 | |||||||| | |||||||| | | |||| | |||| | | ||| ||| ||||| GCAGCATAAG TATAAGTCAC ACAAAGAAGG AAGAAGAGAA CAAAAGAAGA TGTCA 703 hqPGS_C08HBa0235H18.1-_SGN-E213606- (5386 4672) ******************************************************************************** EST sequence 135 -strand 683 n (File: SGN-E212433-) 1 ATCAGCAACA CCATTAGGAC AAAAGACANC CCTATAGTTT GTACTACCAC CAGGGCAAGT 61 AAATGTGCTT GTAGGATCGT CTTGTGGGTA GCTATAAGCA TCGGGACATC TTTTCTTGAA 121 AAATTTGGAC AACTCTGTAG GGCCACATGG ACCTTGGGTG CAACAATATT GTTGTCCTCC 181 AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC 241 ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 301 AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 361 AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 421 TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 481 ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 541 TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA 601 TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA 661 GAAGAGAACA AAAGAAGATG TCA Predicted gene structure (within gDNA segment 10552 to 3026): Exon 1 5354 4672 ( 683 n); cDNA 4 683 ( 680 n); score: 0.783 MATCH C08HBa0235H18.1- SGN-E212433- 0.783 683 1.000 C PGS_C08HBa0235H18.1-_SGN-E212433- (5354 4672) Alignment (genomic DNA sequence = upper lines): AGTAGAGCCA TAAGGACAAA ACATAACCTT GTAGTCTGTA GTCCAACTCT GACAAGTAAA 5295 || | ||| | |||||||| | | | || | |||| |||| | | || | |||||||| AGCAACACCA TTAGGACAAA AGACANCCCT ATAGTTTGTA CTACCACCAG GGCAAGTAAA 63 AGTACTTGTT GGATCGTCTT GAGGATAACT ATAGGCATCG GGACATCTTT GTTTGAAAAA 5235 || ||||| |||||||||| | || || || ||| |||||| |||||||||| |||||||| TGTGCTTGTA GGATCGTCTT GTGGGTAGCT ATAAGCATCG GGACATCTTT TCTTGAAAAA 123 TCTTGACAAA TCGGTAGGAC CACATGGACC TTGAGTGCAA CAATATTGTT GTCCTCCGAA 5175 | | ||||| || ||||| | |||||||||| ||| |||||| |||||||||| ||||||| || TTTGGACAAC TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT GTCCTCCAAA 183 TGTAGTACAA GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GAACCAGGGC ATTCACCGTT 5115 || |||||| |||||||||| ||||||| || |||| |||| | | ||| | ||||||| || CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT 243 TATATTAGCA ACACATTGAA TTGGATGACA TTTTCCCGGC CCAGGGTTAG TTGGGCCGAA 5055 |||||| || || |||| ||| ||||| |||||| | ||| || | ||||| | || TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA 303 AGACATAGGG ATGTTGAATC CATCAATAAC AGAAATGTCC CAGAAATCTA AGTTGCTAAA 4995 || ||| || || || |||| |||| | | |||||||||| || ||||||| |||||||||| AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA 363 TTGATTCAAA GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT TGCATTCCAA 4935 || | ||| ||||| || | ||| |||||| ||| ||||| |||||||| | || | || CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA 423 GACTCCACCA CAATCACCGG TCTGGCACCA ACCTCTACCA GCACCATCAA AATTGCAATT 4875 |||||||||| |||||||| | |||| || |||||| || ||| ||| || | |||||| GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC 483 AGTACGACCC CAAATACGTG CCATTTTGGT GCCCGGTGGA GCCCAAAACC ACCAACTTTG 4815 |||||||||| || ||||||| |||| || || ||| ||| || | ||| |||| AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG 543 ACCTCTCTCG AGACGTCGGC CACCTCCTAC GGGAGTCGCC GCTGCCCATA CGGTGTATGG 4755 |||| | | |||||||| | |||| |||| ||||||| || ||||| | |||||||||| GCCTCGATTG AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG 603 ACAGTTGTTA TGGACCTCAA ATACACCGGA AGCATAAGTG TAAGTCACAA AGGCAAGGAG 4695 ||||||||| | ||||| | || | || ||||||||| ||||||||| | ||||| ACAGTTGTTG CGTACCTC-A AT--AGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA 660 AAAGAACACT AAACAAGTTG TCA 4672 |||| || ||| ||| || ||| GAAGAGAACA AAAGAAGATG TCA 683 hqPGS_C08HBa0235H18.1-_SGN-E212433- (5354 4672) ******************************************************************************** EST sequence 105 -strand 630 n (File: SGN-E213091-) 1 GGGCAAGTAA ATGTGCTNGT AGGATCGTCT GTGGGTAGCT ATAAGCATCG GGACATCTTT 61 TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT 121 GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC 181 ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG 241 TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA 301 AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG 361 TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA 421 AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA 481 CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA 541 CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA 601 GAAGGAAGAA GAGAACAAAA GAAGATGTCA Predicted gene structure (within gDNA segment 10022 to 3026): Exon 1 5302 4672 ( 631 n); cDNA 4 630 ( 627 n); score: 0.791 MATCH C08HBa0235H18.1- SGN-E213091- 0.791 631 1.002 C PGS_C08HBa0235H18.1-_SGN-E213091- (5302 4672) Alignment (genomic DNA sequence = upper lines): CAAGTAAAAG TACTTGTTGG ATCGTCTTGA GGATAACTAT AGGCATCGGG ACATCTTTGT 5243 |||||||| | | || || || |||||| || || || |||| | |||||||| |||||||| CAAGTAAATG TGCTNGTAGG ATCGTC-TGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC 62 TTGAAAAATC TTGACAAATC GGTAGGACCA CATGGACCTT GAGTGCAACA ATATTGTTGT 5183 ||||||||| | ||||| || ||||| ||| |||||||||| | |||||||| |||||||||| TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT 122 CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA CCCTAAGTGA ACCAGGGCAT 5123 ||||| || | | |||||||| |||||||||| ||||| |||| || |||| | | ||| ||| CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT 182 TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT TTCCCGGCCC AGGGTTAGTT 5063 ||||| |||| |||| || || |||||| | ||||||| |||| | ||| || ||| TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT 242 GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG AAATGTCCCA GAAATCTAAG 5003 ||| | |||| ||| || || || |||||| || | | || |||||||||| ||||||||| GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG 302 TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG 4943 |||||||| | | | ||| || ||| || ||| | |||||||| | ||||| || |||||| | TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA 362 CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC CTCTACCAGC ACCATCAAAA 4883 || | |||| |||||||||| |||||| ||| || || || |||| || || | ||| ||| CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG 422 TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC CCGGTGGAGC CCAAAACCAC 4823 |||||| || |||||||||| ||||||||| || || || | || ||||| | | TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC 482 CAACTTTGAC CTCTCTCGAG ACGTCGGCCA CCTCCTACGG GAGTCGCCGC TGCCCATACG 4763 || |||| | ||| | ||| |||||| ||| || |||| | |||||| || ||||| ||| CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG 542 GTGTATGGAC AGTTGTTATG GACCTCAAAT ACACCGGAAG CATAAGTGTA AGTCACAAAG 4703 |||||||||| ||||||| | ||||| ||| | || || ||||||| || ||||||| | GTGTATGGAC AGTTGTTGCG TACCTC-AAT --AGTGGCAG CATAAGTATA AGTCACACAA 599 GCAAGGAGAA AGAACACTAA ACAAGTTGTC A 4672 ||||| | ||| || || | ||| |||| | AGAAGGAAGA AGAGAACAAA AGAAGATGTC A 630 hqPGS_C08HBa0235H18.1-_SGN-E213091- (5302 4672) ******************************************************************************** EST sequence 108 -strand 632 n (File: SGN-E302616-) 1 AGGGCAAGTA AATGTGCTAG TAGGATCATC CTGTGGGTAG CTATACGCAT CAGGACATCT 61 CTGTTTGCAC AATCCCGACA AATCAGTAGG GCCACATGGA CCTTGTGTGC AACAATATTG 121 TTGTCCTCCG AACGTGGTAC AAGGATTGTT ACATCCTCCG GGTACCCTAA GTGAACCAGG 181 ACATTCACCA TTTATATTAG CCGTACAATG AATTGCATGG CATTTCCCTC CACTAGGATT 241 GGTCGGGGCG AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC 301 TAGGTTGCTA AACTGGTCCA AGGCGTACTC GGCCAGGGTG TTTGGTGGTT TGCCCCACCC 361 GGTACATTGC AAGACCCCAC CACAATCACC AGTCTGACAT GAACCTCTAC CAGCACCATC 421 AAAGTTGCAA TTCGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GTGCATTGAT 481 GACCCATGTT TGGCCTCGAT CAAGACGTCG ACCACCGCCT ATTGGGGTCG ACGCCGCCCA 541 GACGGTGTAT GGACAGTTGT TGCGTACCTC GAAAGTGGCA GCATAAGTGT AAGTCACAAA 601 AGCAAGAAGG AAGAAAACAA AAGAAGATCT CA Predicted gene structure (within gDNA segment 6870 to 7): Exon 1 5302 4672 ( 631 n); cDNA 5 632 ( 628 n); score: 0.813 MATCH C08HBa0235H18.1- SGN-E302616- 0.813 631 0.998 C PGS_C08HBa0235H18.1-_SGN-E302616- (5302 4672) Alignment (genomic DNA sequence = upper lines): CAAGTAAAAG TACTTGTTGG ATCGTCTTGA GGATAACTAT AGGCATCGGG ACATCTTTGT 5243 |||||||| | | || || || ||| || || || || |||| | ||||| || |||||| ||| CAAGTAAATG TGCTAGTAGG ATCATCCTGT GGGTAGCTAT ACGCATCAGG ACATCTCTGT 64 TTGAAAAATC TTGACAAATC GGTAGGACCA CATGGACCTT GAGTGCAACA ATATTGTTGT 5183 ||| | |||| |||||||| ||||| ||| |||||||||| | |||||||| |||||||||| TTGCACAATC CCGACAAATC AGTAGGGCCA CATGGACCTT GTGTGCAACA ATATTGTTGT 124 CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA CCCTAAGTGA ACCAGGGCAT 5123 |||||||| | | |||||||| ||||||||| |||||||||| |||||||||| |||||| ||| CCTCCGAACG TGGTACAAGG ATTGTTACAT CCTCCGGGTA CCCTAAGTGA ACCAGGACAT 184 TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT TTCCCGGCCC AGGGTTAGTT 5063 ||||| |||| ||||||| ||| |||||| | ||| |||| | || | ||| || || TCACCATTTA TATTAGCCGT ACAATGAATT GCATGGCATT TCCCTCCACT AGGATTGGTC 244 GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG AAATGTCCCA GAAATCTAAG 5003 ||| |||||| ||| || || || |||||| || | | || |||||||||| |||||||| | GGGGCGAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA GAAATCTAGG 304 TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG 4943 |||||||| | | | ||| || ||| || || | |||||||| ||||||| || ||| || | TTGCTAAACT GGTCCAAGGC GTACTCGGCC AGGGTGTTTG GTGGTTTGCC CCACCCGGTA 364 CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC CTCTACCAGC ACCATCAAAA 4883 |||| ||||| | |||||||| |||||| ||| || || ||| |||||||||| ||||||||| CATTGCAAGA CCCCACCACA ATCACCAGTC TGACATGAAC CTCTACCAGC ACCATCAAAG 424 TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC CCGGTGGAGC CCAAAACCAC 4823 |||||||| | |||||||||| ||||||||| || || |||| || || || | | TTGCAATTCG TACGACCCCA TATACGTGCC ATCTTAGTGC CCCTCGGTGC ATTGATGACC 484 CAACTTTGAC CTCTCTCGAG ACGTCGGCCA CCTCCTACGG GAGTCGCCGC TGCCCATACG 4763 || |||| | ||| || || |||||| ||| || |||| | | |||| ||| ||||| ||| CATGTTTGGC CTCGATCAAG ACGTCGACCA CCGCCTATTG GGGTCGACGC CGCCCAGACG 544 GTGTATGGAC AGTTGTTATG GACCTCAAAT ACACCGGAAG CATAAGTGTA AGTCACAAAG 4703 |||||||||| ||||||| | ||||| | | | || || |||||||||| ||||||||| GTGTATGGAC AGTTGTTGCG TACCTC-GA- A-AGTGGCAG CATAAGTGTA AGTCACAAAA 601 GCAAGGAGAA AGAACACTAA ACAAGTTGTC A 4672 ||||| || | |||| || || | ||| | || | GCAAGAAGGA AGAAAACAAA AGAAGATCTC A 632 hqPGS_C08HBa0235H18.1-_SGN-E302616- (5302 4672) ******************************************************************************** EST sequence 414 -strand 482 n (File: SGN-E279388-) 1 TCCTCCAGGT ACCCTAAGTG AACCAGGGCA TTCTCCGTAT ATATGGCCTG TGCATTGAAT 61 TGCATGGCAT TTTCCAGGGC CAGGCTTAGT AGGGCCTAAA GACATAGGGA TGTTGAATCC 121 ATCAATATCA GAAATATCCC AAAAATCTAG GTTACCAAAT TGGTTCAAAG CGTATTCAGC 181 TAAGGTGTTG GGTGGTTTAC CCCATCCATT GCAAGCCAGG ACTCCACCAC AATCACCAGT 241 CTGGCACCAA CCTCTTCCAG CACCATCAAA GTTGCAATTA GTACGACCCC AAATACGTGC 301 CATTTTAGTG CCAGGTGGGG CCCAAAACCA CCAACTCTGA CCTCTCTCGA GACGTCGACC 361 ACCTCCTACG GGGTCCGCTG CCGCCCAATC GGTGTAGGGG CAGTTGTTAT GGACCTCAAA 421 TACACCGGAA CCATAAGTGT AAGTCACAAA GGCAAGGAGA AAAAACACTA AACAAGTTGT 481 CA Predicted gene structure (within gDNA segment 6636 to 4072): Exon 1 5153 4672 ( 482 n); cDNA 1 482 ( 482 n); score: 0.900 MATCH C08HBa0235H18.1- SGN-E279388- 0.900 482 1.000 C PGS_C08HBa0235H18.1-_SGN-E279388- (5153 4672) Alignment (genomic DNA sequence = upper lines): TCCTCCGGGT ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTAGCAA CACATTGAAT 5094 |||||| ||| |||||||||| |||||||||| ||| |||| | |||| | |||||||| TCCTCCAGGT ACCCTAAGTG AACCAGGGCA TTCTCCGTAT ATATGGCCTG TGCATTGAAT 60 TGGATGACAT TTTCCCGGCC CAGGGTTAGT TGGGCCGAAA GACATAGGGA TGTTGAATCC 5034 || ||| ||| ||||| || | |||| ||||| ||||| ||| |||||||||| |||||||||| TGCATGGCAT TTTCCAGGGC CAGGCTTAGT AGGGCCTAAA GACATAGGGA TGTTGAATCC 120 ATCAATAACA GAAATGTCCC AGAAATCTAA GTTGCTAAAT TGATTCAAAG CGTATTCAGC 4974 ||||||| || ||||| |||| | ||||||| ||| | |||| || ||||||| |||||||||| ATCAATATCA GAAATATCCC AAAAATCTAG GTTACCAAAT TGGTTCAAAG CGTATTCAGC 180 TAAGGTGTTT GGTGGTTTAC CCCATCCTTT GCATTCCAAG ACTCCACCAC AATCACCGGT 4914 ||||||||| |||||||||| ||||||| || ||| ||| | |||||||||| ||||||| || TAAGGTGTTG GGTGGTTTAC CCCATCCATT GCAAGCCAGG ACTCCACCAC AATCACCAGT 240 CTGGCACCAA CCTCTACCAG CACCATCAAA ATTGCAATTA GTACGACCCC AAATACGTGC 4854 |||||||||| ||||| |||| |||||||||| ||||||||| |||||||||| |||||||||| CTGGCACCAA CCTCTTCCAG CACCATCAAA GTTGCAATTA GTACGACCCC AAATACGTGC 300 CATTTTGGTG CCCGGTGGAG CCCAAAACCA CCAACTTTGA CCTCTCTCGA GACGTCGGCC 4794 |||||| ||| || ||||| | |||||||||| |||||| ||| |||||||||| ||||||| || CATTTTAGTG CCAGGTGGGG CCCAAAACCA CCAACTCTGA CCTCTCTCGA GACGTCGACC 360 ACCTCCTACG GGAGTCGCCG CTGCCCATAC GGTGTATGGA CAGTTGTTAT GGACCTCAAA 4734 |||||||||| || ||| | | ||||| | |||||| || |||||||||| |||||||||| ACCTCCTACG GGGTCCGCTG CCGCCCAATC GGTGTAGGGG CAGTTGTTAT GGACCTCAAA 420 TACACCGGAA GCATAAGTGT AAGTCACAAA GGCAAGGAGA AAGAACACTA AACAAGTTGT 4674 |||||||||| ||||||||| |||||||||| |||||||||| || ||||||| |||||||||| TACACCGGAA CCATAAGTGT AAGTCACAAA GGCAAGGAGA AAAAACACTA AACAAGTTGT 480 CA 4672 || CA 482 hqPGS_C08HBa0235H18.1-_SGN-E279388- (5153 4672) ******************************************************************************** EST sequence 158 -strand 207 n (File: SGN-E303218-) 1 TCAAAGTTGC GTTTAGTACG ACCCCAAATA CGTGCCATTT TAGTGCCAGG TGGGGCCCAT 61 AGCCACCATC TCTGACCTCT CTCGAGAAGT CGACCACCTC CTACGGGGAC CGCTGCCGCC 121 CAAACGGTGT AGGGGCAGTT GTTATGGACC TCAAATACAC CGGAACCATA AGTGTAAGTC 181 ACAAAGGCAA GGAGAAAAAA CACTAAA Predicted gene structure (within gDNA segment 6713 to 3992): Exon 1 4888 4682 ( 207 n); cDNA 1 207 ( 207 n); score: 0.894 MATCH C08HBa0235H18.1- SGN-E303218- 0.894 207 1.000 C PGS_C08HBa0235H18.1-_SGN-E303218- (4888 4682) Alignment (genomic DNA sequence = upper lines): TCAAAATTGC AATTAGTACG ACCCCAAATA CGTGCCATTT TGGTGCCCGG TGGAGCCCAA 4829 ||||| |||| |||||||| |||||||||| |||||||||| | ||||| || ||| ||||| TCAAAGTTGC GTTTAGTACG ACCCCAAATA CGTGCCATTT TAGTGCCAGG TGGGGCCCAT 60 AACCACCAAC TTTGACCTCT CTCGAGACGT CGGCCACCTC CTACGGGAGT CGCCGCTGCC 4769 | |||||| | | |||||||| ||||||| || || ||||||| ||||||| ||| || ||| AGCCACCATC TCTGACCTCT CTCGAGAAGT CGACCACCTC CTACGGGGAC CGCTGCCGCC 120 CATACGGTGT ATGGACAGTT GTTATGGACC TCAAATACAC CGGAAGCATA AGTGTAAGTC 4709 || ||||||| | || ||||| |||||||||| |||||||||| ||||| |||| |||||||||| CAAACGGTGT AGGGGCAGTT GTTATGGACC TCAAATACAC CGGAACCATA AGTGTAAGTC 180 ACAAAGGCAA GGAGAAAGAA CACTAAA 4682 |||||||||| ||||||| || ||||||| ACAAAGGCAA GGAGAAAAAA CACTAAA 207 hqPGS_C08HBa0235H18.1-_SGN-E303218- (4888 4682) ******************************************************************************** EST sequence 202 -strand 495 n (File: SGN-E286425-) 1 GAATGTTGTA CAAGGGTTGT TACATCCTCC AGGTACCCTA AGTGAACCAG GGCATTCACC 61 GTTTATATTG GCTGTGCATT GAATTGGATG ACATTTTCCA GGGCCAGGCT TAGTTGGGCC 121 AAAAGACATA GGGATGTTGA ATCCATCAAT AACAGAAATA TCCCAAAAAT CTAGGTTACC 181 AAACTGGTTC AAAGCGTATT CAGCTAAGGT GTTTGGTGGT TTACCCCATC CTTTGCAATC 241 CAGGACTCCA CCACAATCAC CAGTCTGGCA CCAACCTCTT CCAGCACCAT CAAAGTTGCA 301 ATTAGTACGA CCCCAAATAC GTGCCATTTT AGTGCCAGGT GGGGCCCAAA ACCACCAACT 361 CTGACCTCTC TCGAGACGTC GACCACCTCC TACGGGGACC GCTGCCGCCC AAACGGTGTA 421 GGGGCAGTTG TTATGGACCT CAAATACACC GGAACCATAA GTGTAAGTCA CAAAGGCAAG 481 GAGAAAAAAC ACTAA Predicted gene structure (within gDNA segment 5850 to 4002): Exon 1 5177 4683 ( 495 n); cDNA 1 495 ( 495 n); score: 0.923 MATCH C08HBa0235H18.1- SGN-E286425- 0.923 495 1.000 C PGS_C08HBa0235H18.1-_SGN-E286425- (5177 4683) Alignment (genomic DNA sequence = upper lines): GAATGTAGTA CAAGGGTTGT TACATCCTCC GGGTACCCTA AGTGAACCAG GGCATTCACC 5118 |||||| ||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| GAATGTTGTA CAAGGGTTGT TACATCCTCC AGGTACCCTA AGTGAACCAG GGCATTCACC 60 GTTTATATTA GCAACACATT GAATTGGATG ACATTTTCCC GGCCCAGGGT TAGTTGGGCC 5058 ||||||||| || |||| |||||||||| ||||||||| || ||||| | |||||||||| GTTTATATTG GCTGTGCATT GAATTGGATG ACATTTTCCA GGGCCAGGCT TAGTTGGGCC 120 GAAAGACATA GGGATGTTGA ATCCATCAAT AACAGAAATG TCCCAGAAAT CTAAGTTGCT 4998 ||||||||| |||||||||| |||||||||| ||||||||| ||||| |||| ||| ||| | AAAAGACATA GGGATGTTGA ATCCATCAAT AACAGAAATA TCCCAAAAAT CTAGGTTACC 180 AAATTGATTC AAAGCGTATT CAGCTAAGGT GTTTGGTGGT TTACCCCATC CTTTGCATTC 4938 ||| || ||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || AAACTGGTTC AAAGCGTATT CAGCTAAGGT GTTTGGTGGT TTACCCCATC CTTTGCAATC 240 CAAGACTCCA CCACAATCAC CGGTCTGGCA CCAACCTCTA CCAGCACCAT CAAAATTGCA 4878 || ||||||| |||||||||| | |||||||| ||||||||| |||||||||| |||| ||||| CAGGACTCCA CCACAATCAC CAGTCTGGCA CCAACCTCTT CCAGCACCAT CAAAGTTGCA 300 ATTAGTACGA CCCCAAATAC GTGCCATTTT GGTGCCCGGT GGAGCCCAAA ACCACCAACT 4818 |||||||||| |||||||||| |||||||||| ||||| ||| || ||||||| |||||||||| ATTAGTACGA CCCCAAATAC GTGCCATTTT AGTGCCAGGT GGGGCCCAAA ACCACCAACT 360 TTGACCTCTC TCGAGACGTC GGCCACCTCC TACGGGAGTC GCCGCTGCCC ATACGGTGTA 4758 ||||||||| |||||||||| | |||||||| |||||| | || || |||| | |||||||| CTGACCTCTC TCGAGACGTC GACCACCTCC TACGGGGACC GCTGCCGCCC AAACGGTGTA 420 TGGACAGTTG TTATGGACCT CAAATACACC GGAAGCATAA GTGTAAGTCA CAAAGGCAAG 4698 || |||||| |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| GGGGCAGTTG TTATGGACCT CAAATACACC GGAACCATAA GTGTAAGTCA CAAAGGCAAG 480 GAGAAAGAAC ACTAA 4683 |||||| ||| ||||| GAGAAAAAAC ACTAA 495 hqPGS_C08HBa0235H18.1-_SGN-E286425- (5177 4683) ******************************************************************************** EST sequence 55 -strand 710 n (File: SGN-E263607-) 1 TCATCAGTAC TTGCAGGCAT CTCCAAGGGG AAATTTGGAT CAGCAACACC ATTAGGACAA 61 AAGACAACCN TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT 121 TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG 181 CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA 241 CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA 301 ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT 361 CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG 421 GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA 481 GTCTGACATG TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT 541 GCCATCTTAG TTCCCCTCGG AGCATTGATG ACCCATGTTT GGCCTCGATT GAGACGTCGA 601 CCACCGCCTA TCGGAGTCGA TGCCGCCCAA ACGGTGTATG GACAGTTGTT GCGTACCTCA 661 ATAGTGGCAG CATAAGTATA AGTCACACAA AGAAGGAAGA AGAGAACAAA Predicted gene structure (within gDNA segment 10932 to 3136): Exon 1 5404 4706 ( 699 n); cDNA 1 687 ( 687 n); score: 0.785 MATCH C08HBa0235H18.1- SGN-E263607- 0.785 699 0.985 C PGS_C08HBa0235H18.1-_SGN-E263607- (5404 4706) Alignment (genomic DNA sequence = upper lines): TCAAGAGTAT TTGTAGGAAT CTCCAATGGG AAATTTGTTG TTTCATTGTG AGTAGAGCCA 5345 ||| |||| ||| ||| || |||||| ||| ||||||| | ||| | | | | ||| TCATCAGTAC TTGCAGGCAT CTCCAAGGGG AAATTTG--G -ATCA--G-C A--ACA-CCA 51 TAAGGACAAA ACATAACCTT GTAGTCTGTA GTCCAACTCT GACAAGTAAA AGTACTTGTT 5285 | |||||||| | | |||| | |||| |||| | | || | |||||||| || ||||| TTAGGACAAA AGACAACCNT ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA 111 GGATCGTCTT GAGGATAACT ATAGGCATCG GGACATCTTT GTTTGAAAAA TCTTGACAAA 5225 |||||||||| | || || || ||| |||||| |||||||||| |||||||| | | ||||| GGATCGTCTT GTGGGTAGCT ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC 171 TCGGTAGGAC CACATGGACC TTGAGTGCAA CAATATTGTT GTCCTCCGAA TGTAGTACAA 5165 || ||||| | |||||||||| ||| |||||| |||||||||| ||||||| || || |||||| TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA 231 GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GAACCAGGGC ATTCACCGTT TATATTAGCA 5105 |||||||||| ||||||| || |||| |||| | | ||| | ||||||| || |||||| || GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC 291 ACACATTGAA TTGGATGACA TTTTCCCGGC CCAGGGTTAG TTGGGCCGAA AGACATAGGG 5045 || |||| ||| ||||| |||||| | ||| || | ||||| | || || ||| || GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 351 ATGTTGAATC CATCAATAAC AGAAATGTCC CAGAAATCTA AGTTGCTAAA TTGATTCAAA 4985 || || |||| |||| | | |||||||||| || ||||||| |||||||||| || | ||| ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 411 GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT TGCATTCCAA GACTCCACCA 4925 ||||| || | ||| |||||| ||| ||||| |||||||| | || | || |||||||||| GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 471 CAATCACCGG TCTGGCACCA ACCTCTACCA GCACCATCAA AATTGCAATT AGTACGACCC 4865 |||||||| | |||| || |||||| || ||| ||| || | |||||| |||||||||| CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 531 CAAATACGTG CCATTTTGGT GCCCGGTGGA GCCCAAAACC ACCAACTTTG ACCTCTCTCG 4805 || ||||||| |||| || || ||| ||| || | ||| |||| |||| | | CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 591 AGACGTCGGC CACCTCCTAC GGGAGTCGCC GCTGCCCATA CGGTGTATGG ACAGTTGTTA 4745 |||||||| | |||| |||| ||||||| || ||||| | |||||||||| ||||||||| AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG 651 TGGACCTCAA ATACACCGGA AGCATAAGTG TAAGTCACA 4706 | ||||| | || | || ||||||||| ||||||||| CGTACCTC-A AT--AGTGGC AGCATAAGTA TAAGTCACA 687 hqPGS_C08HBa0235H18.1-_SGN-E263607- (5404 4706) ******************************************************************************** EST sequence 435 -strand 805 n (File: SGN-E260562-) 1 TTCATTACGG TAGAGATCAG TGACTAATGA GGGCGATTAA AATGAGAAAA CTCAAATTCA 61 CTNGGCCACT TCATCAGTAC TGCAGGGCAT CTCCAAGGGG AAATTTGGAT CAGCAACACC 121 ATTAGGACAA AAGACAACCC TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT 181 AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA 241 CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA 301 AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC 361 CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG 421 AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA 481 GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC 541 ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC 601 CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG ACCCATGTTT GGCCTCGATT 661 GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA ACGGTGTATG GACAGTTGTT 721 GCGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACACAA AGAAGGAAGA AGAGAACAAA 781 AGAAGATGTC AAGTAGCCCA TGTTT Predicted gene structure (within gDNA segment 11632 to 2886): Exon 1 8552 8503 ( 50 n); cDNA 68 117 ( 50 n); score: 0.700 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0.70), Pa: 0.189 (s: 0.72) Exon 2 5349 4706 ( 644 n); cDNA 118 757 ( 640 n); score: 0.793 MATCH C08HBa0235H18.1- SGN-E260562- 0.787 694 0.862 C PGS_C08HBa0235H18.1-_SGN-E260562- (8552 8503,5349 4706) Alignment (genomic DNA sequence = upper lines): ACTTCAAGAG TACTTGTAGG CATCTCCAAT GGGAAATTTG TTGTTTCATT GTGAGTAGAG 8493 |||||| || |||| || ||||||||| |||||||||| || ACTTCATCAG TACTGCAGGG CATCTCCAAG GGGAAATTTG GATCAGCAAC .......... 117 CCATAAGGAC AGAACATTAT CTTGTAGTCT GTAGTCCAAC TCTGACAAGT AAAAGTACTA 8433 .......... .......... .......... .......... .......... .......... 117 GTTGGATCGT CTTGAGGGTA ACTATAGGCA TCAGGACATC TTTGTTTGAA AAATCTTGAC 8373 .......... .......... .......... .......... .......... .......... 117 AATTCAGTAG GACCACATGG ACCGTGATTA CAACAATATT GTTGTCCTCC GAATGTTGTA 8313 .......... .......... .......... .......... .......... .......... 117 CAAGGGTTGT TACATCCTCC AGGTACCCTA AGTGAACCAG GGCATTCACC GTTTATATTG 8253 .......... .......... .......... .......... .......... .......... 117 GCTGTGCATT GAATTGGATG ACATTTTCCA GGGCCAGGCT TAGTTGGGCC AAAAGACATA 8193 .......... .......... .......... .......... .......... .......... 117 GGGATGTTGA ATCCATCAAT AACAGAAATA TCCCAAAAAT CTAGGTTACC AAACTGGTTC 8133 .......... .......... .......... .......... .......... .......... 117 AAAGCGTATT CAGCTAAGGT GTTTGGTGGT TTACCCCATC CTTTGCAATC CAGGACTCCA 8073 .......... .......... .......... .......... .......... .......... 117 CCACAATCAC CAGTCTGGCA CCAACCTCTT CCAGCACCAT CAAAGTTGCA ATTAGTACGA 8013 .......... .......... .......... .......... .......... .......... 117 CCCCAAATAC GTGCCATTTT AGTGCCAGGT GGGGCCCAAA ACCACCAACT CTGACCTCTC 7953 .......... .......... .......... .......... .......... .......... 117 TCGAGACGTC GACCACCTCC TACGGGGACC GCTGCCGCCC AAACGGTGTA GGGGCAGTTG 7893 .......... .......... .......... .......... .......... .......... 117 TTATGGACCT CAAATACACC GGAACCATAA GTGTAAGTCA CAAAGGCAAG GAGAAAAAAC 7833 .......... .......... .......... .......... .......... .......... 117 ACTAAACAAG TTGTCAAGTG ACTCATTTTA GTATAAGAAG TTGTAGGATA TATTTGCATA 7773 .......... .......... .......... .......... .......... .......... 117 TCGAGCTAGG GGTTTATATA GTGGTATGGC GGCTTTTTTT CACTATGGAC ATTAATCATA 7713 .......... .......... .......... .......... .......... .......... 117 TAAATATTGG CACTTGTTAT AAACATATAT AGAAAATTAA AAAAAAAAAT TGTATCCAAA 7653 .......... .......... .......... .......... .......... .......... 117 ATATCTCCAC TTGAAAAAAA AAGCCGCCAA TATAATATGA GTACAGCCTA TTATAAGTAA 7593 .......... .......... .......... .......... .......... .......... 117 TATATTTTGT TCACTCCAGT CATATTTCAC AGTTCAACTT TTTGCTATTT TGAAAATTTA 7533 .......... .......... .......... .......... .......... .......... 117 TGCATTAACA CATTATGATA TTTATAATGA TTAAAAAAAA AAGAGAAGAT ATTTTTTAAT 7473 .......... .......... .......... .......... .......... .......... 117 TAAGTGATAT ATACGTATTA TTAGTTTTGT GTTTAACTAT ATATTAATTT TAAATTATTT 7413 .......... .......... .......... .......... .......... .......... 117 AGTTTAGTAT ATACAACAAA TCGGAAAAAT GCATGGCAGG GCATGAAACC TAAAATTGTG 7353 .......... .......... .......... .......... .......... .......... 117 GAAAATTTCC TAATTTTTTT TGAACATTTT TTCATGAGAA ATTTAGTTAG TAGAGAATTC 7293 .......... .......... .......... .......... .......... .......... 117 TCTTCATAAT TTTTATTGGT TATGTTTTCA TAAATAAAAT AACTTAAAAA TTTTGAATTA 7233 .......... .......... .......... .......... .......... .......... 117 CAAATTTGTA ATTTTTGTTT ACAGACAATT GCCTTTTTTC CCTTGATTAT TTTTTTCCGT 7173 .......... .......... .......... .......... .......... .......... 117 CGTATATATA TAGTGGATTT TTATATTAAA TTATTTATAG CATATTTATC AAGTGGACAT 7113 .......... .......... .......... .......... .......... .......... 117 AATAATTAAT TGAAAATGTG CATGCATTCT ACAGTCAAAA AAGTTGAGCA AATGGGTAGG 7053 .......... .......... .......... .......... .......... .......... 117 CGTAGAGATG AGTGGAACCT TAAAAGTTTG AATTTTTTTT TTATTCGATA CAAGCTATGT 6993 .......... .......... .......... .......... .......... .......... 117 AGGTCTTGTT TCACACGAGA AAAATGAATT TTGAAATTAG TTATGAATTT CGTTACTAAT 6933 .......... .......... .......... .......... .......... .......... 117 CTATCTCTAA TATGCAAAGT TTTGAATAAT CTATCCCTAA TTGGTTACTA GATATAGAAC 6873 .......... .......... .......... .......... .......... .......... 117 TAGCAATGAT TTTTGTTATT GATTGAATAA TTTGTTCGAT ATTGATTTTT GTTTTATGTT 6813 .......... .......... .......... .......... .......... .......... 117 TCCTCCGTCC GATATTGTTT GTTATGGTTT CTATTTATAG ACTCAAACTA TAAAAACTTT 6753 .......... .......... .......... .......... .......... .......... 117 GACTAACATT TGAAGATACA TTTTTTTATC ATATTAATAT GAAAAGATTG TAATTTATAG 6693 .......... .......... .......... .......... .......... .......... 117 TACTTTTCAT ATTGTTTTAG AATATTTAAT TTTTTTGGTT TAAAGTATCG AATTAATGTG 6633 .......... .......... .......... .......... .......... .......... 117 ATTTAATTTA CCTTTAGAAA TCAATCAAAA TTGACTTTCG ATAAGCGTAA CATGACAAAT 6573 .......... .......... .......... .......... .......... .......... 117 ATTTCTGGAC GGAGGGAGTA TTGATTTTTT ATCGTTGTCA TCATGGTCGT CTTTGTTTGT 6513 .......... .......... .......... .......... .......... .......... 117 TGGTTCATAA TAAGATATTC TTGAGTTTAA ATGAGATGAT TGTATATTTG AGTTTAATTT 6453 .......... .......... .......... .......... .......... .......... 117 TGGAACATGC AAGAGTTTTT GGATTTGATT TTGATCGGTA GATGTACTAG TACCTGCCAC 6393 .......... .......... .......... .......... .......... .......... 117 CAAAACATCG TGAAGGATTC AGTGAACGAC TTGAAACTTA GTAACACAAG ACAATTCACT 6333 .......... .......... .......... .......... .......... .......... 117 GAATGGTTGT TGGCTCTACC GGAGGAGTCT GAAATCAACA ACGTGTAACT GCTTGGGCAG 6273 .......... .......... .......... .......... .......... .......... 117 AATAAAAGAA CTTAAATTGT TTTAATAGAA TTTTTTAAGT AACATTGCAA TTATTTAAGC 6213 .......... .......... .......... .......... .......... .......... 117 AATACGAACG CCCAATTGTA TTTTATTTTA TTTTTTTATA ATAAAAGAGT TTTGGAAGTA 6153 .......... .......... .......... .......... .......... .......... 117 ATGAATTTTA ATACAATATC AATATTTAAA TAATGTTGAA TTCTTAGCTT AGGCATTGAA 6093 .......... .......... .......... .......... .......... .......... 117 TCGCAATTGA AAGTGAAAGC CCTTTTTTGC TATTTCAAGT TATGAATTCA GATACTAAAG 6033 .......... .......... .......... .......... .......... .......... 117 GATAACGTCT TTTAGAAGGA AGATATTAAT GGGGTAAGTG ATTTTTAAAA GTTGACTTTT 5973 .......... .......... .......... .......... .......... .......... 117 ATATAAAATT ATCTTCTTCT TTTTTCTTTT TCTTTTTTGT ATATCGACTC ATTTAATTAT 5913 .......... .......... .......... .......... .......... .......... 117 CAGTTTAACT TAATGTTCGA ATCTTTAAGC TTTTTAATTA ATATTGAATT TATTATTTCT 5853 .......... .......... .......... .......... .......... .......... 117 TTAAACTTAT AAATTCAAAT CTAAACACTT ATTAAAATTT TAATGAATTT TCATATACTA 5793 .......... .......... .......... .......... .......... .......... 117 TAGTATACTT GAAAATGTTC CAAAAGCCGC CAATAAAAAA ATATTTCCAT CTGTTTGACT 5733 .......... .......... .......... .......... .......... .......... 117 TATATTATGA CATGTAACGA GTTGTCCCTA CAATTTTATA TTTTCAGATC TAGGTACTTT 5673 .......... .......... .......... .......... .......... .......... 117 AATATATTAA CTAGACTAAT TTTTTTTCAT TATAATTAAA AATTTTAAGA AAAAAACTGT 5613 .......... .......... .......... .......... .......... .......... 117 ACTCCAGATA TAATTTCAAT TTAAAATTAA AATACCATAT ATAAGACAAA GCATCGATCA 5553 .......... .......... .......... .......... .......... .......... 117 TAGATTGTTA TTCAGATCTT AGCCACTTCA AACAAACAAA TGTAAAAGAA ATGTGTACAA 5493 .......... .......... .......... .......... .......... .......... 117 GGCAAATTAA AGACAATGTC CATCTTCAAA ACAAATTTAA CAAAAAAGAG ATTGGCTCAA 5433 .......... .......... .......... .......... .......... .......... 117 CTCAAGATTT CTACTTAATT AAGCCACTTC AAGAGTATTT GTAGGAATCT CCAATGGGAA 5373 .......... .......... .......... .......... .......... .......... 117 ATTTGTTGTT TCATTGTGAG TAGAGCCATA AGGACAAAAC ATAACCTTGT AGTCTGTAGT 5313 | |||| ||||||||| | |||| | | ||| |||| | .......... .......... ...A-CCATT AGGACAAAAG ACAACCCTAT AGTTTGTACT 153 CCAACTCTGA CAAGTAAAAG TACTTGTTGG ATCGTCTTGA GGATAACTAT AGGCATCGGG 5253 | || | |||||||| | | ||||| || ||||||||| || || |||| | |||||||| ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG 213 ACATCTTTGT TTGAAAAATC TTGACAAATC GGTAGGACCA CATGGACCTT GAGTGCAACA 5193 |||||||| ||||||||| | ||||| || ||||| ||| |||||||||| | |||||||| ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA 273 ATATTGTTGT CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA CCCTAAGTGA 5133 |||||||||| ||||| || | | |||||||| |||||||||| ||||| |||| || |||| | ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC 333 ACCAGGGCAT TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT TTCCCGGCCC 5073 | ||| ||| ||||| |||| |||| || || |||||| | ||||||| |||| | GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT 393 AGGGTTAGTT GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG AAATGTCCCA 5013 ||| || ||| ||| | |||| ||| || || || |||||| || | | || |||||||||| AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA 453 GAAATCTAAG TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG GTGGTTTACC 4953 ||||||||| |||||||| | | | ||| || ||| || ||| | |||||||| | ||||| || AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC 513 CCATCCTTTG CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC CTCTACCAGC 4893 |||||| | || | |||| |||||||||| |||||| ||| || || || |||| || || CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC 573 ACCATCAAAA TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC CCGGTGGAGC 4833 | ||| ||| |||||| || |||||||||| ||||||||| || || || | || ||||| AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC 633 CCAAAACCAC CAACTTTGAC CTCTCTCGAG ACGTCGGCCA CCTCCTACGG GAGTCGCCGC 4773 | | || |||| | ||| | ||| |||||| ||| || |||| | |||||| || ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC 693 TGCCCATACG GTGTATGGAC AGTTGTTATG GACCTCAAAT ACACCGGAAG CATAAGTGTA 4713 ||||| ||| |||||||||| ||||||| | ||||| ||| | || || ||||||| || CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTC-AAT --AGTGGCAG CATAAGTATA 750 AGTCACA 4706 ||||||| AGTCACA 757 hqPGS_C08HBa0235H18.1-_SGN-E260562- (5349 4706) ******************************************************************************** EST sequence 113 -strand 704 n (File: SGN-E212978-) 1 GAAATTTGAT CAGCAACACC ATTAGGACAA AAGACAACCC TATAGTTTGA CTACCACCAG 61 GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT ATAAGCATCG GGACATCTTT 121 TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT 181 GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC 241 ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG 301 TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA 361 AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG 421 TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA 481 AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA 541 CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA 601 CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA 661 GAAGGAAGAA GAGAACAAAA GAAGATGTCA AGTAGCCCAT GTTT Predicted gene structure (within gDNA segment 10622 to 2886): Exon 1 5808 5791 ( 18 n); cDNA 1 18 ( 18 n); score: 0.611 Intron 1 5790 5348 ( 443 n); Pd: 0.900 (s: 0), Pa: 0.000 (s: 0.72) Exon 2 5347 4706 ( 642 n); cDNA 19 656 ( 638 n); score: 0.793 MATCH C08HBa0235H18.1- SGN-E212978- 0.793 660 0.938 C PGS_C08HBa0235H18.1-_SGN-E212978- (5808 5791,5347 4706) Alignment (genomic DNA sequence = upper lines): GAATTTTCAT ATACTATAGT ATACTTGAAA ATGTTCCAAA AGCCGCCAAT AAAAAAATAT 5749 ||| ||| || | | | GAAATTTGAT CAGCAACA.. .......... .......... .......... .......... 18 TTCCATCTGT TTGACTTATA TTATGACATG TAACGAGTTG TCCCTACAAT TTTATATTTT 5689 .......... .......... .......... .......... .......... .......... 18 CAGATCTAGG TACTTTAATA TATTAACTAG ACTAATTTTT TTTCATTATA ATTAAAAATT 5629 .......... .......... .......... .......... .......... .......... 18 TTAAGAAAAA AACTGTACTC CAGATATAAT TTCAATTTAA AATTAAAATA CCATATATAA 5569 .......... .......... .......... .......... .......... .......... 18 GACAAAGCAT CGATCATAGA TTGTTATTCA GATCTTAGCC ACTTCAAACA AACAAATGTA 5509 .......... .......... .......... .......... .......... .......... 18 AAAGAAATGT GTACAAGGCA AATTAAAGAC AATGTCCATC TTCAAAACAA ATTTAACAAA 5449 .......... .......... .......... .......... .......... .......... 18 AAAGAGATTG GCTCAACTCA AGATTTCTAC TTAATTAAGC CACTTCAAGA GTATTTGTAG 5389 .......... .......... .......... .......... .......... .......... 18 GAATCTCCAA TGGGAAATTT GTTGTTTCAT TGTGAGTAGA GCCATAAGGA CAAAACATAA 5329 |||| |||| ||||| | || .......... .......... .......... .......... .CCATTAGGA CAAAAGACAA 37 CCTTGTAGTC TGTAGTCCAA CTCTGACAAG TAAAAGTACT TGTTGGATCG TCTTGAGGAT 5269 || | |||| || | | | | | | |||| |||| || || ||| |||||| ||||| || | CCCTATAGTT TG-ACTACCA CCAGGGCAAG TAAATGTGCT TGTAGGATCG TCTTGTGGGT 96 AACTATAGGC ATCGGGACAT CTTTGTTTGA AAAATCTTGA CAAATCGGTA GGACCACATG 5209 | ||||| || |||||||||| |||| |||| ||||| | || ||| || ||| || ||||||| AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA CAACTCTGTA GGGCCACATG 156 GACCTTGAGT GCAACAATAT TGTTGTCCTC CGAATGTAGT ACAAGGGTTG TTACATCCTC 5149 ||||||| || |||||||||| |||||||||| | || || || |||||||||| |||||||||| GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT ACAAGGGTTG TTACATCCTC 216 CGGGTACCCT AAGTGAACCA GGGCATTCAC CGTTTATATT AGCAACACAT TGAATTGGAT 5089 | |||||| | ||| | | | || ||||||| | |||||||| || || ||||||| | CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT GGCCGTGCAA TGAATTGCGT 276 GACATTTTCC CGGCCCAGGG TTAGTTGGGC CGAAAGACAT AGGGATGTTG AATCCATCAA 5029 |||||||||| | ||| || |||||| | |||| ||| || || || |||||||| | GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT TGGAATATTA AATCCATCGA 336 TAACAGAAAT GTCCCAGAAA TCTAAGTTGC TAAATTGATT CAAAGCGTAT TCAGCTAAGG 4969 | |||||| |||||| ||| |||||||||| |||| || | ||| ||||| || |||| || CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGCGTAC TCGGCTAGGG 396 TGTTTGGTGG TTTACCCCAT CCTTTGCATT CCAAGACTCC ACCACAATCA CCGGTCTGGC 4909 ||||||| || ||| |||||| || | || | |||||||| |||||||||| || ||||| | TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC ACCACAATCA CCAGTCTGAC 456 ACCAACCTCT ACCAGCACCA TCAAAATTGC AATTAGTACG ACCCCAAATA CGTGCCATTT 4849 | |||||| || ||| || | ||| |||| || |||||| |||||| ||| |||||||| | ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG ACCCCATATA CGTGCCATCT 516 TGGTGCCCGG TGGAGCCCAA AACCACCAAC TTTGACCTCT CTCGAGACGT CGGCCACCTC 4789 | || ||| ||||| | ||| |||| |||| | ||||||| || ||||| | TAGTTCCCCT CGGAGCATTG ATGACCCATG TTTGGCCTCG ATTGAGACGT CGACCACCGC 576 CTACGGGAGT CGCCGCTGCC CATACGGTGT ATGGACAGTT GTTATGGACC TCAAATACAC 4729 ||| ||||| || || ||| || ||||||| |||||||||| ||| | ||| || ||| | CTATCGGAGT CGATGCCGCC CAAACGGTGT ATGGACAGTT GTTGCGTACC TC-AAT--AG 633 CGGAAGCATA AGTGTAAGTC ACA 4706 || |||||| ||| |||||| ||| TGGCAGCATA AGTATAAGTC ACA 656 hqPGS_C08HBa0235H18.1-_SGN-E212978- (5347 4706) ******************************************************************************** EST sequence 303 -strand 645 n (File: SGN-E276677-) 1 AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT 61 AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 121 GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 181 CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 241 TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 301 AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 361 GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 421 CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 481 CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 541 GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT 601 AAGTATAAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA AGATG Predicted gene structure (within gDNA segment 10202 to 3056): Exon 1 5322 4706 ( 617 n); cDNA 1 614 ( 614 n); score: 0.794 MATCH C08HBa0235H18.1- SGN-E276677- 0.794 617 0.957 C PGS_C08HBa0235H18.1-_SGN-E276677- (5322 4706) Alignment (genomic DNA sequence = upper lines): AGTCTGTAGT CCAACTCTGA CAAGTAAAAG TACTTGTTGG ATCGTCTTGA GGATAACTAT 5263 ||| |||| | | || | |||||||| | | ||||| || ||||||||| || || |||| AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT 60 AGGCATCGGG ACATCTTTGT TTGAAAAATC TTGACAAATC GGTAGGACCA CATGGACCTT 5203 | |||||||| |||||||| ||||||||| | ||||| || ||||| ||| |||||||||| AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 120 GAGTGCAACA ATATTGTTGT CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA 5143 | |||||||| |||||||||| ||||| || | | |||||||| |||||||||| ||||| |||| GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 180 CCCTAAGTGA ACCAGGGCAT TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT 5083 || |||| | | ||| ||| ||||| |||| |||| || || |||||| | ||||||| CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 240 TTCCCGGCCC AGGGTTAGTT GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG 5023 |||| | ||| || ||| ||| | |||| ||| || || || |||||| || | | || TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 300 AAATGTCCCA GAAATCTAAG TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG 4963 |||||||||| ||||||||| |||||||| | | | ||| || ||| || ||| | |||||||| AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 360 GTGGTTTACC CCATCCTTTG CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC 4903 | ||||| || |||||| | || | |||| |||||||||| |||||| ||| || || || GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 420 CTCTACCAGC ACCATCAAAA TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC 4843 |||| || || | ||| ||| |||||| || |||||||||| ||||||||| || || || | CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 480 CCGGTGGAGC CCAAAACCAC CAACTTTGAC CTCTCTCGAG ACGTCGGCCA CCTCCTACGG 4783 || ||||| | | || |||| | ||| | ||| |||||| ||| || |||| | CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 540 GAGTCGCCGC TGCCCATACG GTGTATGGAC AGTTGTTATG GACCTCAAAT ACACCGGAAG 4723 |||||| || ||||| ||| |||||||||| ||||||| | ||||| ||| | || || GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTC-AAT --AGTGGCAG 597 CATAAGTGTA AGTCACA 4706 ||||||| || ||||||| CATAAGTATA AGTCACA 614 hqPGS_C08HBa0235H18.1-_SGN-E276677- (5322 4706) ******************************************************************************** EST sequence 388 -strand 645 n (File: SGN-E209968-) 1 AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT 61 AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 121 GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 181 CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 241 TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 301 AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 361 GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 421 CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 481 CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 541 GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT 601 AAGTATAAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA AGATG Predicted gene structure (within gDNA segment 10202 to 3056): Exon 1 5322 4706 ( 617 n); cDNA 1 614 ( 614 n); score: 0.794 MATCH C08HBa0235H18.1- SGN-E209968- 0.794 617 0.957 C PGS_C08HBa0235H18.1-_SGN-E209968- (5322 4706) Alignment (genomic DNA sequence = upper lines): AGTCTGTAGT CCAACTCTGA CAAGTAAAAG TACTTGTTGG ATCGTCTTGA GGATAACTAT 5263 ||| |||| | | || | |||||||| | | ||||| || ||||||||| || || |||| AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT 60 AGGCATCGGG ACATCTTTGT TTGAAAAATC TTGACAAATC GGTAGGACCA CATGGACCTT 5203 | |||||||| |||||||| ||||||||| | ||||| || ||||| ||| |||||||||| AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 120 GAGTGCAACA ATATTGTTGT CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA 5143 | |||||||| |||||||||| ||||| || | | |||||||| |||||||||| ||||| |||| GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 180 CCCTAAGTGA ACCAGGGCAT TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT 5083 || |||| | | ||| ||| ||||| |||| |||| || || |||||| | ||||||| CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 240 TTCCCGGCCC AGGGTTAGTT GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG 5023 |||| | ||| || ||| ||| | |||| ||| || || || |||||| || | | || TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 300 AAATGTCCCA GAAATCTAAG TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG 4963 |||||||||| ||||||||| |||||||| | | | ||| || ||| || ||| | |||||||| AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 360 GTGGTTTACC CCATCCTTTG CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC 4903 | ||||| || |||||| | || | |||| |||||||||| |||||| ||| || || || GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 420 CTCTACCAGC ACCATCAAAA TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC 4843 |||| || || | ||| ||| |||||| || |||||||||| ||||||||| || || || | CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 480 CCGGTGGAGC CCAAAACCAC CAACTTTGAC CTCTCTCGAG ACGTCGGCCA CCTCCTACGG 4783 || ||||| | | || |||| | ||| | ||| |||||| ||| || |||| | CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 540 GAGTCGCCGC TGCCCATACG GTGTATGGAC AGTTGTTATG GACCTCAAAT ACACCGGAAG 4723 |||||| || ||||| ||| |||||||||| ||||||| | ||||| ||| | || || GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTC-AAT --AGTGGCAG 597 CATAAGTGTA AGTCACA 4706 ||||||| || ||||||| CATAAGTATA AGTCACA 614 hqPGS_C08HBa0235H18.1-_SGN-E209968- (5322 4706) ******************************************************************************** EST sequence 9 -strand 645 n (File: SGN-E211803-) 1 GGGCAAGTAA ATGTGCTNGT AGGATCGTCT NGTGGGTAGC TATAAGCATC GGGACATCTT 61 TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 121 TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 181 CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 241 GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 301 AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 361 GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 421 AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 481 ACCCATGTTT GGCCTCGATT GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA 541 ACGGTGTATG GACAGTTGTT GCGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACACAA 601 AGAAGGAAGA AGAGAACAAA AGAAGATGTC AAGTAGCCCA TGTTT Predicted gene structure (within gDNA segment 10032 to 2886): Exon 1 5302 4706 ( 597 n); cDNA 4 597 ( 594 n); score: 0.797 MATCH C08HBa0235H18.1- SGN-E211803- 0.797 597 0.926 C PGS_C08HBa0235H18.1-_SGN-E211803- (5302 4706) Alignment (genomic DNA sequence = upper lines): CAAGTAAAAG TACTTGTTGG ATCGTCTTGA GGATAACTAT AGGCATCGGG ACATCTTTGT 5243 |||||||| | | || || || ||||||| | || || |||| | |||||||| |||||||| CAAGTAAATG TGCTNGTAGG ATCGTCTNGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC 63 TTGAAAAATC TTGACAAATC GGTAGGACCA CATGGACCTT GAGTGCAACA ATATTGTTGT 5183 ||||||||| | ||||| || ||||| ||| |||||||||| | |||||||| |||||||||| TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT 123 CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA CCCTAAGTGA ACCAGGGCAT 5123 ||||| || | | |||||||| |||||||||| ||||| |||| || |||| | | ||| ||| CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT 183 TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT TTCCCGGCCC AGGGTTAGTT 5063 ||||| |||| |||| || || |||||| | ||||||| |||| | ||| || ||| TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT 243 GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG AAATGTCCCA GAAATCTAAG 5003 ||| | |||| ||| || || || |||||| || | | || |||||||||| ||||||||| GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG 303 TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG 4943 |||||||| | | | ||| || ||| || ||| | |||||||| | ||||| || |||||| | TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA 363 CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC CTCTACCAGC ACCATCAAAA 4883 || | |||| |||||||||| |||||| ||| || || || |||| || || | ||| ||| CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG 423 TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC CCGGTGGAGC CCAAAACCAC 4823 |||||| || |||||||||| ||||||||| || || || | || ||||| | | TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC 483 CAACTTTGAC CTCTCTCGAG ACGTCGGCCA CCTCCTACGG GAGTCGCCGC TGCCCATACG 4763 || |||| | ||| | ||| |||||| ||| || |||| | |||||| || ||||| ||| CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG 543 GTGTATGGAC AGTTGTTATG GACCTCAAAT ACACCGGAAG CATAAGTGTA AGTCACA 4706 |||||||||| ||||||| | ||||| ||| | || || ||||||| || ||||||| GTGTATGGAC AGTTGTTGCG TACCTC-AAT --AGTGGCAG CATAAGTATA AGTCACA 597 hqPGS_C08HBa0235H18.1-_SGN-E211803- (5302 4706) ******************************************************************************** EST sequence 141 -strand 642 n (File: SGN-E212383-) 1 CAAGTAAATG TGCTGTAGGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC 61 TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT 121 CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT 181 TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT 241 GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG 301 TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA 361 CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG 421 TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC 481 CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG 541 GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT AAGTATAAGT CACACAAAGA 601 AGGAAGAAGA GAACAAAAGA AGATGTCAAG TAGCCCATGT TT Predicted gene structure (within gDNA segment 10002 to 2886): Exon 1 5302 4706 ( 597 n); cDNA 1 594 ( 594 n); score: 0.796 MATCH C08HBa0235H18.1- SGN-E212383- 0.796 597 0.930 C PGS_C08HBa0235H18.1-_SGN-E212383- (5302 4706) Alignment (genomic DNA sequence = upper lines): CAAGTAAAAG TACTTGTTGG ATCGTCTTGA GGATAACTAT AGGCATCGGG ACATCTTTGT 5243 |||||||| | | || || ||||||||| || || |||| | |||||||| |||||||| CAAGTAAATG TGCTGTAGGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC 60 TTGAAAAATC TTGACAAATC GGTAGGACCA CATGGACCTT GAGTGCAACA ATATTGTTGT 5183 ||||||||| | ||||| || ||||| ||| |||||||||| | |||||||| |||||||||| TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT 120 CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA CCCTAAGTGA ACCAGGGCAT 5123 ||||| || | | |||||||| |||||||||| ||||| |||| || |||| | | ||| ||| CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT 180 TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT TTCCCGGCCC AGGGTTAGTT 5063 ||||| |||| |||| || || |||||| | ||||||| |||| | ||| || ||| TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT 240 GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG AAATGTCCCA GAAATCTAAG 5003 ||| | |||| ||| || || || |||||| || | | || |||||||||| ||||||||| GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG 300 TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG 4943 |||||||| | | | ||| || ||| || ||| | |||||||| | ||||| || |||||| | TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA 360 CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC CTCTACCAGC ACCATCAAAA 4883 || | |||| |||||||||| |||||| ||| || || || |||| || || | ||| ||| CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG 420 TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC CCGGTGGAGC CCAAAACCAC 4823 |||||| || |||||||||| ||||||||| || || || | || ||||| | | TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC 480 CAACTTTGAC CTCTCTCGAG ACGTCGGCCA CCTCCTACGG GAGTCGCCGC TGCCCATACG 4763 || |||| | ||| | ||| |||||| ||| || |||| | |||||| || ||||| ||| CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG 540 GTGTATGGAC AGTTGTTATG GACCTCAAAT ACACCGGAAG CATAAGTGTA AGTCACA 4706 |||||||||| ||||||| | ||||| ||| | || || ||||||| || ||||||| GTGTATGGAC AGTTGTTGCG TACCTC-AAT --AGTGGCAG CATAAGTATA AGTCACA 594 hqPGS_C08HBa0235H18.1-_SGN-E212383- (5302 4706) ******************************************************************************** EST sequence 50 -strand 636 n (File: SGN-E211072-) 1 GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 61 TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 121 TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 181 CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 241 GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 301 AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 361 GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 421 AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 481 ACCCATGTTT GGCCTCGATT GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA 541 ACGGTGTATG GACAGTTGTT GCGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACACAA 601 AGAAGGAAGA AGAGAACAAA AGAAGATGTC AAGTAG Predicted gene structure (within gDNA segment 10032 to 2976): Exon 1 5302 4706 ( 597 n); cDNA 4 597 ( 594 n); score: 0.801 MATCH C08HBa0235H18.1- SGN-E211072- 0.801 597 0.939 C PGS_C08HBa0235H18.1-_SGN-E211072- (5302 4706) Alignment (genomic DNA sequence = upper lines): CAAGTAAAAG TACTTGTTGG ATCGTCTTGA GGATAACTAT AGGCATCGGG ACATCTTTGT 5243 |||||||| | | ||||| || ||||||||| || || |||| | |||||||| |||||||| CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC 63 TTGAAAAATC TTGACAAATC GGTAGGACCA CATGGACCTT GAGTGCAACA ATATTGTTGT 5183 ||||||||| | ||||| || ||||| ||| |||||||||| | |||||||| |||||||||| TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT 123 CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA CCCTAAGTGA ACCAGGGCAT 5123 ||||| || | | |||||||| |||||||||| ||||| |||| || |||| | | ||| ||| CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT 183 TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT TTCCCGGCCC AGGGTTAGTT 5063 ||||| |||| |||| || || |||||| | ||||||| |||| | ||| || ||| TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT 243 GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG AAATGTCCCA GAAATCTAAG 5003 ||| | |||| ||| || || || |||||| || | | || |||||||||| ||||||||| GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG 303 TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG 4943 |||||||| | | | ||| || ||| || ||| | |||||||| | ||||| || |||||| | TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA 363 CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC CTCTACCAGC ACCATCAAAA 4883 || | |||| |||||||||| |||||| ||| || || || |||| || || | ||| ||| CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG 423 TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC CCGGTGGAGC CCAAAACCAC 4823 |||||| || |||||||||| ||||||||| || || || | || ||||| | | TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC 483 CAACTTTGAC CTCTCTCGAG ACGTCGGCCA CCTCCTACGG GAGTCGCCGC TGCCCATACG 4763 || |||| | ||| | ||| |||||| ||| || |||| | |||||| || ||||| ||| CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG 543 GTGTATGGAC AGTTGTTATG GACCTCAAAT ACACCGGAAG CATAAGTGTA AGTCACA 4706 |||||||||| ||||||| | ||||| ||| | || || ||||||| || ||||||| GTGTATGGAC AGTTGTTGCG TACCTC-AAT --AGTGGCAG CATAAGTATA AGTCACA 597 hqPGS_C08HBa0235H18.1-_SGN-E211072- (5302 4706) ******************************************************************************** EST sequence 217 -strand 632 n (File: SGN-E251623-) 1 AGGGCAAGTA AATGTGCTTG TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT 61 TTTCTTGAAA AATTTGGACA ACTCTGTAGG GCCACATGGA CCTTGGGTGC AACAATATTG 121 TTGTCCTCCA AACGTGGTAC AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG 181 ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT 241 TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC 301 TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC 361 GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 421 AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT 481 GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA 541 AACGGTGTAT GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAAGTAT AAGTCACACA 601 AAGAAGGAAG AAGAGACCAA AAGAAGATGT CA Predicted gene structure (within gDNA segment 10042 to 3026): Exon 1 5302 4706 ( 597 n); cDNA 5 598 ( 594 n); score: 0.801 MATCH C08HBa0235H18.1- SGN-E251623- 0.801 597 0.945 C PGS_C08HBa0235H18.1-_SGN-E251623- (5302 4706) Alignment (genomic DNA sequence = upper lines): CAAGTAAAAG TACTTGTTGG ATCGTCTTGA GGATAACTAT AGGCATCGGG ACATCTTTGT 5243 |||||||| | | ||||| || ||||||||| || || |||| | |||||||| |||||||| CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC 64 TTGAAAAATC TTGACAAATC GGTAGGACCA CATGGACCTT GAGTGCAACA ATATTGTTGT 5183 ||||||||| | ||||| || ||||| ||| |||||||||| | |||||||| |||||||||| TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT 124 CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA CCCTAAGTGA ACCAGGGCAT 5123 ||||| || | | |||||||| |||||||||| ||||| |||| || |||| | | ||| ||| CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT 184 TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT TTCCCGGCCC AGGGTTAGTT 5063 ||||| |||| |||| || || |||||| | ||||||| |||| | ||| || ||| TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT 244 GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG AAATGTCCCA GAAATCTAAG 5003 ||| | |||| ||| || || || |||||| || | | || |||||||||| ||||||||| GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG 304 TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG 4943 |||||||| | | | ||| || ||| || ||| | |||||||| | ||||| || |||||| | TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA 364 CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC CTCTACCAGC ACCATCAAAA 4883 || | |||| |||||||||| |||||| ||| || || || |||| || || | ||| ||| CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG 424 TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC CCGGTGGAGC CCAAAACCAC 4823 |||||| || |||||||||| ||||||||| || || || | || ||||| | | TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC 484 CAACTTTGAC CTCTCTCGAG ACGTCGGCCA CCTCCTACGG GAGTCGCCGC TGCCCATACG 4763 || |||| | ||| | ||| |||||| ||| || |||| | |||||| || ||||| ||| CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG 544 GTGTATGGAC AGTTGTTATG GACCTCAAAT ACACCGGAAG CATAAGTGTA AGTCACA 4706 |||||||||| ||||||| | ||||| ||| | || || ||||||| || ||||||| GTGTATGGAC AGTTGTTGCG TACCTC-AAT --AGTGGCAG CATAAGTATA AGTCACA 598 hqPGS_C08HBa0235H18.1-_SGN-E251623- (5302 4706) ******************************************************************************** EST sequence 12 -strand 617 n (File: SGN-E211417-) 1 GGGCAAGTAA ATGTGCTGTA GGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTA 61 TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGATC CTTGGGTGCA ACAATATTGT 121 TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 181 CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 241 GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 301 AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 361 GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 421 AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 481 ACCCATGTTT GGCCTCGATT GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA 541 ACGGTGTATG GACAGTTGTT GCGTAAATCA ATAGTGGCAG CATAAGTATA AGTCACACAA 601 AGAAGGAAGA AGAGAAC Predicted gene structure (within gDNA segment 10032 to 3166): Exon 1 5302 4706 ( 597 n); cDNA 4 597 ( 594 n); score: 0.787 MATCH C08HBa0235H18.1- SGN-E211417- 0.787 597 0.968 C PGS_C08HBa0235H18.1-_SGN-E211417- (5302 4706) Alignment (genomic DNA sequence = upper lines): CAAGTAAAAG TACTTGTTGG ATCGTCTTGA GGATAACTAT AGGCATCGGG ACATCTTTGT 5243 |||||||| | | || || ||||||||| || || |||| | |||||||| |||||| | CAAGTAAATG TGCTGTAGGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTATTC 63 TTGAAAAATC TTGACAAATC GGTAGGACCA CATGGACCTT GAGTGCAACA ATATTGTTGT 5183 ||||||||| | ||||| || ||||| ||| |||| |||| | |||||||| |||||||||| TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGATCCTT GGGTGCAACA ATATTGTTGT 123 CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA CCCTAAGTGA ACCAGGGCAT 5123 ||||| || | | |||||||| |||||||||| ||||| |||| || |||| | | ||| ||| CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT 183 TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT TTCCCGGCCC AGGGTTAGTT 5063 ||||| |||| |||| || || |||||| | ||||||| |||| | ||| || ||| TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT 243 GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG AAATGTCCCA GAAATCTAAG 5003 ||| | |||| ||| || || || |||||| || | | || |||||||||| ||||||||| GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG 303 TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG 4943 |||||||| | | | ||| || ||| || ||| | |||||||| | ||||| || |||||| | TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA 363 CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC CTCTACCAGC ACCATCAAAA 4883 || | |||| |||||||||| |||||| ||| || || || |||| || || | ||| ||| CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG 423 TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC CCGGTGGAGC CCAAAACCAC 4823 |||||| || |||||||||| ||||||||| || || || | || ||||| | | TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC 483 CAACTTTGAC CTCTCTCGAG ACGTCGGCCA CCTCCTACGG GAGTCGCCGC TGCCCATACG 4763 || |||| | ||| | ||| |||||| ||| || |||| | |||||| || ||||| ||| CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG 543 GTGTATGGAC AGTTGTTATG GACCTCAAAT ACACCGGAAG CATAAGTGTA AGTCACA 4706 |||||||||| ||||||| | | || ||| | || || ||||||| || ||||||| GTGTATGGAC AGTTGTTGCG TAAATC-AAT --AGTGGCAG CATAAGTATA AGTCACA 597 hqPGS_C08HBa0235H18.1-_SGN-E211417- (5302 4706) ******************************************************************************** EST sequence 306 -strand 611 n (File: SGN-E256710-) 1 AGGGCAAGTA AATGTGCTTG TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT 61 TTTCTTGAAA AATTTGGACA ACTCTGTAGG GCCACATGGA CCTTGGGTGC AACAATATTG 121 TTGTCCTCCA AACGTGGTAC AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG 181 ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT 241 TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC 301 TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC 361 GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 421 AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT 481 GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA 541 AACGGTGTAT GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAAGTAT AAGTCACACA 601 AAGAAGGAAG A Predicted gene structure (within gDNA segment 10042 to 3236): Exon 1 5302 4706 ( 597 n); cDNA 5 598 ( 594 n); score: 0.801 MATCH C08HBa0235H18.1- SGN-E256710- 0.801 597 0.977 C PGS_C08HBa0235H18.1-_SGN-E256710- (5302 4706) Alignment (genomic DNA sequence = upper lines): CAAGTAAAAG TACTTGTTGG ATCGTCTTGA GGATAACTAT AGGCATCGGG ACATCTTTGT 5243 |||||||| | | ||||| || ||||||||| || || |||| | |||||||| |||||||| CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC 64 TTGAAAAATC TTGACAAATC GGTAGGACCA CATGGACCTT GAGTGCAACA ATATTGTTGT 5183 ||||||||| | ||||| || ||||| ||| |||||||||| | |||||||| |||||||||| TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT 124 CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA CCCTAAGTGA ACCAGGGCAT 5123 ||||| || | | |||||||| |||||||||| ||||| |||| || |||| | | ||| ||| CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT 184 TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT TTCCCGGCCC AGGGTTAGTT 5063 ||||| |||| |||| || || |||||| | ||||||| |||| | ||| || ||| TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT 244 GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG AAATGTCCCA GAAATCTAAG 5003 ||| | |||| ||| || || || |||||| || | | || |||||||||| ||||||||| GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG 304 TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG 4943 |||||||| | | | ||| || ||| || ||| | |||||||| | ||||| || |||||| | TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA 364 CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC CTCTACCAGC ACCATCAAAA 4883 || | |||| |||||||||| |||||| ||| || || || |||| || || | ||| ||| CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG 424 TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC CCGGTGGAGC CCAAAACCAC 4823 |||||| || |||||||||| ||||||||| || || || | || ||||| | | TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC 484 CAACTTTGAC CTCTCTCGAG ACGTCGGCCA CCTCCTACGG GAGTCGCCGC TGCCCATACG 4763 || |||| | ||| | ||| |||||| ||| || |||| | |||||| || ||||| ||| CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG 544 GTGTATGGAC AGTTGTTATG GACCTCAAAT ACACCGGAAG CATAAGTGTA AGTCACA 4706 |||||||||| ||||||| | ||||| ||| | || || ||||||| || ||||||| GTGTATGGAC AGTTGTTGCG TACCTC-AAT --AGTGGCAG CATAAGTATA AGTCACA 598 hqPGS_C08HBa0235H18.1-_SGN-E256710- (5302 4706) ******************************************************************************** EST sequence 119 -strand 594 n (File: SGN-E303485-) 1 CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC 61 TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT 121 CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT 181 TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT 241 GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG 301 TTGCTAAACT GGTCCAAGGC GTACTCGGAT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA 361 CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG 421 TTGCAACCAG TACGACCCCA TATACGTGCC ATTTTAGTTC CCCTCGGAGC ATTGATGACC 481 CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATGG GAGTCGATCC CGCCCAAACG 541 GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT AAGTATAAGT CACA Predicted gene structure (within gDNA segment 10002 to 3366): Exon 1 5302 4706 ( 597 n); cDNA 1 594 ( 594 n); score: 0.801 MATCH C08HBa0235H18.1- SGN-E303485- 0.801 597 1.005 C PGS_C08HBa0235H18.1-_SGN-E303485- (5302 4706) Alignment (genomic DNA sequence = upper lines): CAAGTAAAAG TACTTGTTGG ATCGTCTTGA GGATAACTAT AGGCATCGGG ACATCTTTGT 5243 |||||||| | | ||||| || ||||||||| || || |||| | |||||||| |||||||| CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC 60 TTGAAAAATC TTGACAAATC GGTAGGACCA CATGGACCTT GAGTGCAACA ATATTGTTGT 5183 ||||||||| | ||||| || ||||| ||| |||||||||| | |||||||| |||||||||| TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT 120 CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA CCCTAAGTGA ACCAGGGCAT 5123 ||||| || | | |||||||| |||||||||| ||||| |||| || |||| | | ||| ||| CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT 180 TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT TTCCCGGCCC AGGGTTAGTT 5063 ||||| |||| |||| || || |||||| | ||||||| |||| | ||| || ||| TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT 240 GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG AAATGTCCCA GAAATCTAAG 5003 ||| | |||| ||| || || || |||||| || | | || |||||||||| ||||||||| GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG 300 TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG 4943 |||||||| | | | ||| || ||| || | | | |||||||| | ||||| || |||||| | TTGCTAAACT GGTCCAAGGC GTACTCGGAT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA 360 CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC CTCTACCAGC ACCATCAAAA 4883 || | |||| |||||||||| |||||| ||| || || || |||| || || | ||| ||| CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG 420 TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC CCGGTGGAGC CCAAAACCAC 4823 |||||| || |||||||||| ||||||||| ||||| || | || ||||| | | TTGCAACCAG TACGACCCCA TATACGTGCC ATTTTAGTTC CCCTCGGAGC ATTGATGACC 480 CAACTTTGAC CTCTCTCGAG ACGTCGGCCA CCTCCTACGG GAGTCGCCGC TGCCCATACG 4763 || |||| | ||| | ||| |||||| ||| || |||| || |||||| | ||||| ||| CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATGG GAGTCGATCC CGCCCAAACG 540 GTGTATGGAC AGTTGTTATG GACCTCAAAT ACACCGGAAG CATAAGTGTA AGTCACA 4706 |||||||||| ||||||| | ||||| ||| | || || ||||||| || ||||||| GTGTATGGAC AGTTGTTGCG TACCTC-AAT --AGTGGCAG CATAAGTATA AGTCACA 594 hqPGS_C08HBa0235H18.1-_SGN-E303485- (5302 4706) ******************************************************************************** EST sequence 285 -strand 629 n (File: SGN-E276027-) 1 GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 61 AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 121 CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 181 CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 241 GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 301 CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 361 TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 421 CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT 481 GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG 541 TATGGACAGT TGTTGCGTAC CTCAATAGTG GCAGCATAAG TATAAGTCAC ACAAAGAAGG 601 AAGAAGAGAA CAAAAGAAGA TGTCAAGTA Predicted gene structure (within gDNA segment 9972 to 2986): Exon 1 5299 4706 ( 594 n); cDNA 1 591 ( 591 n); score: 0.800 MATCH C08HBa0235H18.1- SGN-E276027- 0.800 594 0.944 C PGS_C08HBa0235H18.1-_SGN-E276027- (5299 4706) Alignment (genomic DNA sequence = upper lines): GTAAAAGTAC TTGTTGGATC GTCTTGAGGA TAACTATAGG CATCGGGACA TCTTTGTTTG 5240 ||||| || | |||| ||||| |||||| || || ||||| | |||||||||| ||||| ||| GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 60 AAAAATCTTG ACAAATCGGT AGGACCACAT GGACCTTGAG TGCAACAATA TTGTTGTCCT 5180 |||||| | | |||| || || ||| |||||| |||||||| | |||||||||| |||||||||| AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 120 CCGAATGTAG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGAACC AGGGCATTCA 5120 || || || | |||||||||| |||||||||| || |||||| |||| | | ||| |||||| CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 180 CCGTTTATAT TAGCAACACA TTGAATTGGA TGACATTTTC CCGGCCCAGG GTTAGTTGGG 5060 || ||||||| | || || ||||||| |||||||||| | | ||| || |||||| CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 240 CCGAAAGACA TAGGGATGTT GAATCCATCA ATAACAGAAA TGTCCCAGAA ATCTAAGTTG 5000 | |||| || | || || || |||||||| | | ||||| ||||||| || |||||||||| GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 300 CTAAATTGAT TCAAAGCGTA TTCAGCTAAG GTGTTTGGTG GTTTACCCCA TCCTTTGCAT 4940 ||||| || | ||| ||||| || |||| | |||||||| | |||| ||||| ||| | || CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 360 TCCAAGACTC CACCACAATC ACCGGTCTGG CACCAACCTC TACCAGCACC ATCAAAATTG 4880 | ||||||| |||||||||| ||| ||||| || ||||| | || ||| | || ||| ||| TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 420 CAATTAGTAC GACCCCAAAT ACGTGCCATT TTGGTGCCCG GTGGAGCCCA AAACCACCAA 4820 ||| ||||| ||||||| || ||||||||| || || ||| ||||| | ||| CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT 480 CTTTGACCTC TCTCGAGACG TCGGCCACCT CCTACGGGAG TCGCCGCTGC CCATACGGTG 4760 |||| |||| | |||||| ||| ||||| |||| |||| ||| || || ||| |||||| GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG 540 TATGGACAGT TGTTATGGAC CTCAAATACA CCGGAAGCAT AAGTGTAAGT CACA 4706 |||||||||| |||| | || ||| ||| | || ||||| |||| ||||| |||| TATGGACAGT TGTTGCGTAC CTC-AAT--A GTGGCAGCAT AAGTATAAGT CACA 591 hqPGS_C08HBa0235H18.1-_SGN-E276027- (5299 4706) ******************************************************************************** EST sequence 235 -strand 624 n (File: SGN-E307742-) 1 GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 61 AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 121 CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 181 CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 241 GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 301 CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 361 TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 421 CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT 481 GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG 541 TATGGACAGT TGTTGCGTAC CTCAATAGTG GCAGCATAAG TATAAGTCAC ACAAAGAAGG 601 AAGAAGAGAA CAAAAGAAGA TGTC Predicted gene structure (within gDNA segment 9972 to 3036): Exon 1 5299 4706 ( 594 n); cDNA 1 591 ( 591 n); score: 0.800 MATCH C08HBa0235H18.1- SGN-E307742- 0.800 594 0.952 C PGS_C08HBa0235H18.1-_SGN-E307742- (5299 4706) Alignment (genomic DNA sequence = upper lines): GTAAAAGTAC TTGTTGGATC GTCTTGAGGA TAACTATAGG CATCGGGACA TCTTTGTTTG 5240 ||||| || | |||| ||||| |||||| || || ||||| | |||||||||| ||||| ||| GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 60 AAAAATCTTG ACAAATCGGT AGGACCACAT GGACCTTGAG TGCAACAATA TTGTTGTCCT 5180 |||||| | | |||| || || ||| |||||| |||||||| | |||||||||| |||||||||| AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 120 CCGAATGTAG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGAACC AGGGCATTCA 5120 || || || | |||||||||| |||||||||| || |||||| |||| | | ||| |||||| CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 180 CCGTTTATAT TAGCAACACA TTGAATTGGA TGACATTTTC CCGGCCCAGG GTTAGTTGGG 5060 || ||||||| | || || ||||||| |||||||||| | | ||| || |||||| CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 240 CCGAAAGACA TAGGGATGTT GAATCCATCA ATAACAGAAA TGTCCCAGAA ATCTAAGTTG 5000 | |||| || | || || || |||||||| | | ||||| ||||||| || |||||||||| GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 300 CTAAATTGAT TCAAAGCGTA TTCAGCTAAG GTGTTTGGTG GTTTACCCCA TCCTTTGCAT 4940 ||||| || | ||| ||||| || |||| | |||||||| | |||| ||||| ||| | || CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 360 TCCAAGACTC CACCACAATC ACCGGTCTGG CACCAACCTC TACCAGCACC ATCAAAATTG 4880 | ||||||| |||||||||| ||| ||||| || ||||| | || ||| | || ||| ||| TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 420 CAATTAGTAC GACCCCAAAT ACGTGCCATT TTGGTGCCCG GTGGAGCCCA AAACCACCAA 4820 ||| ||||| ||||||| || ||||||||| || || ||| ||||| | ||| CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT 480 CTTTGACCTC TCTCGAGACG TCGGCCACCT CCTACGGGAG TCGCCGCTGC CCATACGGTG 4760 |||| |||| | |||||| ||| ||||| |||| |||| ||| || || ||| |||||| GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG 540 TATGGACAGT TGTTATGGAC CTCAAATACA CCGGAAGCAT AAGTGTAAGT CACA 4706 |||||||||| |||| | || ||| ||| | || ||||| |||| ||||| |||| TATGGACAGT TGTTGCGTAC CTC-AAT--A GTGGCAGCAT AAGTATAAGT CACA 591 hqPGS_C08HBa0235H18.1-_SGN-E307742- (5299 4706) ******************************************************************************** EST sequence 190 -strand 604 n (File: SGN-E255554-) 1 GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 61 AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 121 CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 181 CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 241 GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 301 CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 361 TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 421 CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT 481 GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG 541 TATGGACAGT TGTTGCGTAC CTCAATAGTG GCAGCATAAG TATAAGTCAC ACAAAGAAGG 601 AAGA Predicted gene structure (within gDNA segment 9972 to 3236): Exon 1 5299 4706 ( 594 n); cDNA 1 591 ( 591 n); score: 0.800 MATCH C08HBa0235H18.1- SGN-E255554- 0.800 594 0.983 C PGS_C08HBa0235H18.1-_SGN-E255554- (5299 4706) Alignment (genomic DNA sequence = upper lines): GTAAAAGTAC TTGTTGGATC GTCTTGAGGA TAACTATAGG CATCGGGACA TCTTTGTTTG 5240 ||||| || | |||| ||||| |||||| || || ||||| | |||||||||| ||||| ||| GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 60 AAAAATCTTG ACAAATCGGT AGGACCACAT GGACCTTGAG TGCAACAATA TTGTTGTCCT 5180 |||||| | | |||| || || ||| |||||| |||||||| | |||||||||| |||||||||| AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 120 CCGAATGTAG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGAACC AGGGCATTCA 5120 || || || | |||||||||| |||||||||| || |||||| |||| | | ||| |||||| CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 180 CCGTTTATAT TAGCAACACA TTGAATTGGA TGACATTTTC CCGGCCCAGG GTTAGTTGGG 5060 || ||||||| | || || ||||||| |||||||||| | | ||| || |||||| CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 240 CCGAAAGACA TAGGGATGTT GAATCCATCA ATAACAGAAA TGTCCCAGAA ATCTAAGTTG 5000 | |||| || | || || || |||||||| | | ||||| ||||||| || |||||||||| GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 300 CTAAATTGAT TCAAAGCGTA TTCAGCTAAG GTGTTTGGTG GTTTACCCCA TCCTTTGCAT 4940 ||||| || | ||| ||||| || |||| | |||||||| | |||| ||||| ||| | || CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 360 TCCAAGACTC CACCACAATC ACCGGTCTGG CACCAACCTC TACCAGCACC ATCAAAATTG 4880 | ||||||| |||||||||| ||| ||||| || ||||| | || ||| | || ||| ||| TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 420 CAATTAGTAC GACCCCAAAT ACGTGCCATT TTGGTGCCCG GTGGAGCCCA AAACCACCAA 4820 ||| ||||| ||||||| || ||||||||| || || ||| ||||| | ||| CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT 480 CTTTGACCTC TCTCGAGACG TCGGCCACCT CCTACGGGAG TCGCCGCTGC CCATACGGTG 4760 |||| |||| | |||||| ||| ||||| |||| |||| ||| || || ||| |||||| GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG 540 TATGGACAGT TGTTATGGAC CTCAAATACA CCGGAAGCAT AAGTGTAAGT CACA 4706 |||||||||| |||| | || ||| ||| | || ||||| |||| ||||| |||| TATGGACAGT TGTTGCGTAC CTC-AAT--A GTGGCAGCAT AAGTATAAGT CACA 591 hqPGS_C08HBa0235H18.1-_SGN-E255554- (5299 4706) ******************************************************************************** EST sequence 373 -strand 561 n (File: SGN-E273742-) 1 GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 61 TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 121 CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 181 TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 241 TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA 301 TCACCAGTCT GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT 361 ATACGTGCCA TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA 421 CGTCGACCAC CGCCTATCGG AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT 481 ACCTCAATAG TGGCAGCATA AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA 541 GATGTCAAGT AGCCCATGTT T Predicted gene structure (within gDNA segment 9192 to 2886): Exon 1 5221 4706 ( 516 n); cDNA 1 513 ( 513 n); score: 0.795 MATCH C08HBa0235H18.1- SGN-E273742- 0.795 516 0.920 C PGS_C08HBa0235H18.1-_SGN-E273742- (5221 4706) Alignment (genomic DNA sequence = upper lines): GTAGGACCAC ATGGACCTTG AGTGCAACAA TATTGTTGTC CTCCGAATGT AGTACAAGGG 5162 ||||| |||| |||||||||| ||||||||| |||||||||| |||| || || ||||||||| GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 60 TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGGCATT CACCGTTTAT ATTAGCAACA 5102 |||||||||| |||| ||||| | |||| | | ||| |||| |||| ||||| ||| || TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 120 CATTGAATTG GATGACATTT TCCCGGCCCA GGGTTAGTTG GGCCGAAAGA CATAGGGATG 5042 || ||||||| |||||||| ||| | | || || |||| || | |||| ||| || || CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 180 TTGAATCCAT CAATAACAGA AATGTCCCAG AAATCTAAGT TGCTAAATTG ATTCAAAGCG 4982 || ||||||| | | | ||| ||||||||| |||||||||| ||||||| || | ||| ||| TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 240 TATTCAGCTA AGGTGTTTGG TGGTTTACCC CATCCTTTGC ATTCCAAGAC TCCACCACAA 4922 || || |||| ||||||||| ||||| ||| ||||| | | | | ||||| |||||||||| TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA 300 TCACCGGTCT GGCACCAACC TCTACCAGCA CCATCAAAAT TGCAATTAGT ACGACCCCAA 4862 ||||| |||| | || ||| ||| || ||| ||| ||| | ||||| ||| ||||||||| TCACCAGTCT GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT 360 ATACGTGCCA TTTTGGTGCC CGGTGGAGCC CAAAACCACC AACTTTGACC TCTCTCGAGA 4802 |||||||||| | || || || | ||||| | || | |||| || || | |||| ATACGTGCCA TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA 420 CGTCGGCCAC CTCCTACGGG AGTCGCCGCT GCCCATACGG TGTATGGACA GTTGTTATGG 4742 ||||| |||| | |||| || ||||| || ||||| |||| |||||||||| |||||| | CGTCGACCAC CGCCTATCGG AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT 480 ACCTCAAATA CACCGGAAGC ATAAGTGTAA GTCACA 4706 ||||| ||| | || ||| |||||| ||| |||||| ACCTC-AAT- -AGTGGCAGC ATAAGTATAA GTCACA 513 hqPGS_C08HBa0235H18.1-_SGN-E273742- (5221 4706) ******************************************************************************** EST sequence 347 -strand 551 n (File: SGN-E210488-) 1 ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 61 TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 121 TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 181 ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 241 TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 301 CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC 361 CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 421 ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT 481 AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATGTCAA 541 GTAGCCCATG T Predicted gene structure (within gDNA segment 9112 to 2906): Exon 1 5213 4706 ( 508 n); cDNA 1 505 ( 505 n); score: 0.793 MATCH C08HBa0235H18.1- SGN-E210488- 0.793 508 0.922 C PGS_C08HBa0235H18.1-_SGN-E210488- (5213 4706) Alignment (genomic DNA sequence = upper lines): ACATGGACCT TGAGTGCAAC AATATTGTTG TCCTCCGAAT GTAGTACAAG GGTTGTTACA 5154 |||||||||| || ||||||| |||||||||| |||||| || || ||||||| |||||||||| ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 60 TCCTCCGGGT ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTAGCAA CACATTGAAT 5094 |||||| ||| ||| |||| | | ||| || |||||| ||| ||||| || || ||||| TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 120 TGGATGACAT TTTCCCGGCC CAGGGTTAGT TGGGCCGAAA GACATAGGGA TGTTGAATCC 5034 || |||||| ||||| | ||| || || |||| | ||| | ||| || | | || ||||| TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 180 ATCAATAACA GAAATGTCCC AGAAATCTAA GTTGCTAAAT TGATTCAAAG CGTATTCAGC 4974 ||| | | | |||||||||| | |||||||| ||||||||| || | ||| | |||| || || ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 240 TAAGGTGTTT GGTGGTTTAC CCCATCCTTT GCATTCCAAG ACTCCACCAC AATCACCGGT 4914 || ||||||| || ||||| | ||||||| | || | ||| |||||||||| ||||||| || TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 300 CTGGCACCAA CCTCTACCAG CACCATCAAA ATTGCAATTA GTACGACCCC AAATACGTGC 4854 ||| || | ||||| || | || ||| ||| |||||| | |||||||||| | |||||||| CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC 360 CATTTTGGTG CCCGGTGGAG CCCAAAACCA CCAACTTTGA CCTCTCTCGA GACGTCGGCC 4794 ||| || || ||| |||| | | ||| |||| |||| | || ||||||| || CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 420 ACCTCCTACG GGAGTCGCCG CTGCCCATAC GGTGTATGGA CAGTTGTTAT GGACCTCAAA 4734 ||| |||| ||||||| | | ||||| || |||||||||| |||||||| | ||||| || ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTC-AA 479 TACACCGGAA GCATAAGTGT AAGTCACA 4706 | | || | |||||||| | |||||||| T--AGTGGCA GCATAAGTAT AAGTCACA 505 hqPGS_C08HBa0235H18.1-_SGN-E210488- (5213 4706) ******************************************************************************** EST sequence 283 -strand 538 n (File: SGN-E206152-) 1 ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 61 TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 121 TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 181 ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 241 TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 301 CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC 361 CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 421 ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT 481 AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATGTC Predicted gene structure (within gDNA segment 9112 to 3036): Exon 1 5213 4706 ( 508 n); cDNA 1 505 ( 505 n); score: 0.793 MATCH C08HBa0235H18.1- SGN-E206152- 0.793 508 0.944 C PGS_C08HBa0235H18.1-_SGN-E206152- (5213 4706) Alignment (genomic DNA sequence = upper lines): ACATGGACCT TGAGTGCAAC AATATTGTTG TCCTCCGAAT GTAGTACAAG GGTTGTTACA 5154 |||||||||| || ||||||| |||||||||| |||||| || || ||||||| |||||||||| ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 60 TCCTCCGGGT ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTAGCAA CACATTGAAT 5094 |||||| ||| ||| |||| | | ||| || |||||| ||| ||||| || || ||||| TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 120 TGGATGACAT TTTCCCGGCC CAGGGTTAGT TGGGCCGAAA GACATAGGGA TGTTGAATCC 5034 || |||||| ||||| | ||| || || |||| | ||| | ||| || | | || ||||| TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 180 ATCAATAACA GAAATGTCCC AGAAATCTAA GTTGCTAAAT TGATTCAAAG CGTATTCAGC 4974 ||| | | | |||||||||| | |||||||| ||||||||| || | ||| | |||| || || ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 240 TAAGGTGTTT GGTGGTTTAC CCCATCCTTT GCATTCCAAG ACTCCACCAC AATCACCGGT 4914 || ||||||| || ||||| | ||||||| | || | ||| |||||||||| ||||||| || TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 300 CTGGCACCAA CCTCTACCAG CACCATCAAA ATTGCAATTA GTACGACCCC AAATACGTGC 4854 ||| || | ||||| || | || ||| ||| |||||| | |||||||||| | |||||||| CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC 360 CATTTTGGTG CCCGGTGGAG CCCAAAACCA CCAACTTTGA CCTCTCTCGA GACGTCGGCC 4794 ||| || || ||| |||| | | ||| |||| |||| | || ||||||| || CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 420 ACCTCCTACG GGAGTCGCCG CTGCCCATAC GGTGTATGGA CAGTTGTTAT GGACCTCAAA 4734 ||| |||| ||||||| | | ||||| || |||||||||| |||||||| | ||||| || ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTC-AA 479 TACACCGGAA GCATAAGTGT AAGTCACA 4706 | | || | |||||||| | |||||||| T--AGTGGCA GCATAAGTAT AAGTCACA 505 hqPGS_C08HBa0235H18.1-_SGN-E206152- (5213 4706) ******************************************************************************** EST sequence 378 -strand 534 n (File: SGN-E288509-) 1 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 61 TACCTTAGGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 121 TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 181 AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 241 TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT 301 ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT 361 TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGACTG AGACGTCGAC CACCGCCTAT 421 CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGCAGC 481 ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA GAAGATGTCA AGTA Predicted gene structure (within gDNA segment 9022 to 2986): Exon 1 5204 4706 ( 499 n); cDNA 1 496 ( 496 n); score: 0.786 MATCH C08HBa0235H18.1- SGN-E288509- 0.786 499 0.934 C PGS_C08HBa0235H18.1-_SGN-E288509- (5204 4706) Alignment (genomic DNA sequence = upper lines): TTGAGTGCAA CAATATTGTT GTCCTCCGAA TGTAGTACAA GGGTTGTTAC ATCCTCCGGG 5145 ||| |||||| |||||||||| ||||||| || || |||||| |||||||||| ||||||| || TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 60 TACCCTAAGT GAACCAGGGC ATTCACCGTT TATATTAGCA ACACATTGAA TTGGATGACA 5085 |||| || | | | ||| | ||||||| || |||||| || || |||| ||| ||||| TACCTTAGGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 120 TTTTCCCGGC CCAGGGTTAG TTGGGCCGAA AGACATAGGG ATGTTGAATC CATCAATAAC 5025 |||||| | ||| || | ||||| | || || ||| || || || |||| |||| | | TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 180 AGAAATGTCC CAGAAATCTA AGTTGCTAAA TTGATTCAAA GCGTATTCAG CTAAGGTGTT 4965 |||||||||| || ||||||| |||||||||| || | ||| ||||| || | ||| |||||| AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 240 TGGTGGTTTA CCCCATCCTT TGCATTCCAA GACTCCACCA CAATCACCGG TCTGGCACCA 4905 ||| ||||| |||||||| | || | || |||||||||| |||||||| | |||| || TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT 300 ACCTCTACCA GCACCATCAA AATTGCAATT AGTACGACCC CAAATACGTG CCATTTTGGT 4845 |||||| || ||| ||| || | |||||| |||||||||| || ||||||| |||| || || ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT 360 GCCCGGTGGA GCCCAAAACC ACCAACTTTG ACCTCTCTCG AGACGTCGGC CACCTCCTAC 4785 ||| ||| || | ||| |||| |||| | |||||||| | |||| |||| TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGACTG AGACGTCGAC CACCGCCTAT 420 GGGAGTCGCC GCTGCCCATA CGGTGTATGG ACAGTTGTTA TGGACCTCAA ATACACCGGA 4725 ||||||| || ||||| | |||||||||| ||||||||| | ||||| | || | || CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTC-A AT--AGTGGC 477 AGCATAAGTG TAAGTCACA 4706 ||||||||| ||||||||| AGCATAAGTA TAAGTCACA 496 hqPGS_C08HBa0235H18.1-_SGN-E288509- (5204 4706) ******************************************************************************** EST sequence 70 -strand 644 n (File: SGN-E305583-) 1 GAGTAGAGCC ATAAGGACAG AACATTATCT TGTAGTCTGT AGTCCAACTC TGACAAGTAA 61 AAGTACTAGT TGGATCGTCT TGAGGGTAAC TATAGGCATC AGGACATCTT TGTTTGAAAA 121 ATCTTGACAA TTCAGTAGGA CCACATGGAC CGTGATTACA ACAATATTGT TGTCCTCCGA 181 ATGTTGTACA AGGGTTGTTA CATCCTCCAG GTACCCTAAG TGAACCAGGG CATTCACCGT 241 TTATATTGGC TGTGCATTGA ATTGGATGAC ATTTTCCAGG GCCAGGCTTA GTTGGGCCAA 301 AAGACATAGG GATGTTGAAT CCATCAATAA CAGAAATATC CCAAAAATCT AGGTTACCAA 361 ACTGGTTCAA AGCGTATTCA GCTAAGGTGT TTGGTGGTTT ACCCCATCCT TTGCAATCCA 421 GGACTCCACC ACAATCACCA GTCTGGCACC AACCTCTTCC AGCACCATCA AAGTTGCAAT 481 TAGTACGACC CCAAATACGT GCCATTTTAG TGCCAGGTGG GGCCCAAAAC CACCAACTCT 541 GACCTCTCTC GAGACGTCGA CCACCTCCTA CGGGGACCGC TGCCGCCCAA ACGGTGTAGG 601 GGCAGTTGTT ATGGACCTCA AATACACCGG AACCATAAGT GTAA Predicted gene structure (within gDNA segment 5965 to 4004): Exon 1 5355 4712 ( 644 n); cDNA 1 644 ( 644 n); score: 0.925 MATCH C08HBa0235H18.1- SGN-E305583- 0.925 644 1.000 C PGS_C08HBa0235H18.1-_SGN-E305583- (5355 4712) Alignment (genomic DNA sequence = upper lines): GAGTAGAGCC ATAAGGACAA AACATAACCT TGTAGTCTGT AGTCCAACTC TGACAAGTAA 5296 |||||||||| ||||||||| ||||| | || |||||||||| |||||||||| |||||||||| GAGTAGAGCC ATAAGGACAG AACATTATCT TGTAGTCTGT AGTCCAACTC TGACAAGTAA 60 AAGTACTTGT TGGATCGTCT TGAGGATAAC TATAGGCATC GGGACATCTT TGTTTGAAAA 5236 ||||||| || |||||||||| ||||| |||| |||||||||| ||||||||| |||||||||| AAGTACTAGT TGGATCGTCT TGAGGGTAAC TATAGGCATC AGGACATCTT TGTTTGAAAA 120 ATCTTGACAA ATCGGTAGGA CCACATGGAC CTTGAGTGCA ACAATATTGT TGTCCTCCGA 5176 |||||||||| || |||||| |||||||||| | ||| | || |||||||||| |||||||||| ATCTTGACAA TTCAGTAGGA CCACATGGAC CGTGATTACA ACAATATTGT TGTCCTCCGA 180 ATGTAGTACA AGGGTTGTTA CATCCTCCGG GTACCCTAAG TGAACCAGGG CATTCACCGT 5116 |||| ||||| |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| ATGTTGTACA AGGGTTGTTA CATCCTCCAG GTACCCTAAG TGAACCAGGG CATTCACCGT 240 TTATATTAGC AACACATTGA ATTGGATGAC ATTTTCCCGG CCCAGGGTTA GTTGGGCCGA 5056 ||||||| || |||||| |||||||||| ||||||| || ||||| ||| |||||||| | TTATATTGGC TGTGCATTGA ATTGGATGAC ATTTTCCAGG GCCAGGCTTA GTTGGGCCAA 300 AAGACATAGG GATGTTGAAT CCATCAATAA CAGAAATGTC CCAGAAATCT AAGTTGCTAA 4996 |||||||||| |||||||||| |||||||||| ||||||| || ||| |||||| | ||| | || AAGACATAGG GATGTTGAAT CCATCAATAA CAGAAATATC CCAAAAATCT AGGTTACCAA 360 ATTGATTCAA AGCGTATTCA GCTAAGGTGT TTGGTGGTTT ACCCCATCCT TTGCATTCCA 4936 | || ||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| ACTGGTTCAA AGCGTATTCA GCTAAGGTGT TTGGTGGTTT ACCCCATCCT TTGCAATCCA 420 AGACTCCACC ACAATCACCG GTCTGGCACC AACCTCTACC AGCACCATCA AAATTGCAAT 4876 ||||||||| ||||||||| |||||||||| ||||||| || |||||||||| || ||||||| GGACTCCACC ACAATCACCA GTCTGGCACC AACCTCTTCC AGCACCATCA AAGTTGCAAT 480 TAGTACGACC CCAAATACGT GCCATTTTGG TGCCCGGTGG AGCCCAAAAC CACCAACTTT 4816 |||||||||| |||||||||| |||||||| | |||| ||||| ||||||||| |||||||| | TAGTACGACC CCAAATACGT GCCATTTTAG TGCCAGGTGG GGCCCAAAAC CACCAACTCT 540 GACCTCTCTC GAGACGTCGG CCACCTCCTA CGGGAGTCGC CGCTGCCCAT ACGGTGTATG 4756 |||||||||| ||||||||| |||||||||| |||| ||| || ||||| |||||||| | GACCTCTCTC GAGACGTCGA CCACCTCCTA CGGGGACCGC TGCCGCCCAA ACGGTGTAGG 600 GACAGTTGTT ATGGACCTCA AATACACCGG AAGCATAAGT GTAA 4712 | |||||||| |||||||||| |||||||||| || ||||||| |||| GGCAGTTGTT ATGGACCTCA AATACACCGG AACCATAAGT GTAA 644 hqPGS_C08HBa0235H18.1-_SGN-E305583- (5355 4712) ******************************************************************************** EST sequence 60 -strand 511 n (File: SGN-E306399-) 1 TCAGTAGGAC CACATGGACC GTGATTACAA CAATATTGTT GTCCTCCGAA TGTTGTACAA 61 GGGTTGTTAC ATCCTCCAGG TACCCTAAGT GAACCAGGGC ATTCACCGTT TATATTGGCT 121 GTGCATTGAA TTGGATGACA TTTTCCAGGG CCAGGCTTAG TTGGGCCAAA AGACATAGGG 181 ATGTTGAATC CATCAATAAC AGAAATATCC CAAAAATCTA GGTTACCAAA CTGGTTCAAA 241 GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT TGCAATCCAG GACTCCACCA 301 CAATCACCAG TCTGGCACCA ACCTCTTCCA GCACCATCAA AGTTGCAATT AGTACGACCC 361 CAAATACGTG CCATTTTAGT GCCAGGTGGG GCCCAAAACC ACCAACTCTG ACCTCTCTCG 421 AGACGTCGAC CACCTCCTAC GGGGACCGCT GCCGCCCAAA CGGTGTAGGG GCAGTTGTTA 481 TGGACCTCAA ATACACCGGA ACCATAAGTG T Predicted gene structure (within gDNA segment 5861 to 4024): Exon 1 5224 4714 ( 511 n); cDNA 1 511 ( 511 n); score: 0.920 MATCH C08HBa0235H18.1- SGN-E306399- 0.920 511 1.000 C PGS_C08HBa0235H18.1-_SGN-E306399- (5224 4714) Alignment (genomic DNA sequence = upper lines): TCGGTAGGAC CACATGGACC TTGAGTGCAA CAATATTGTT GTCCTCCGAA TGTAGTACAA 5165 || ||||||| |||||||||| ||| | ||| |||||||||| |||||||||| ||| |||||| TCAGTAGGAC CACATGGACC GTGATTACAA CAATATTGTT GTCCTCCGAA TGTTGTACAA 60 GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GAACCAGGGC ATTCACCGTT TATATTAGCA 5105 |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| |||||| || GGGTTGTTAC ATCCTCCAGG TACCCTAAGT GAACCAGGGC ATTCACCGTT TATATTGGCT 120 ACACATTGAA TTGGATGACA TTTTCCCGGC CCAGGGTTAG TTGGGCCGAA AGACATAGGG 5045 ||||||| |||||||||| |||||| || ||||| |||| ||||||| || |||||||||| GTGCATTGAA TTGGATGACA TTTTCCAGGG CCAGGCTTAG TTGGGCCAAA AGACATAGGG 180 ATGTTGAATC CATCAATAAC AGAAATGTCC CAGAAATCTA AGTTGCTAAA TTGATTCAAA 4985 |||||||||| |||||||||| |||||| ||| || ||||||| ||| | ||| || |||||| ATGTTGAATC CATCAATAAC AGAAATATCC CAAAAATCTA GGTTACCAAA CTGGTTCAAA 240 GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT TGCATTCCAA GACTCCACCA 4925 |||||||||| |||||||||| |||||||||| |||||||||| |||| |||| |||||||||| GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT TGCAATCCAG GACTCCACCA 300 CAATCACCGG TCTGGCACCA ACCTCTACCA GCACCATCAA AATTGCAATT AGTACGACCC 4865 |||||||| | |||||||||| |||||| ||| |||||||||| | |||||||| |||||||||| CAATCACCAG TCTGGCACCA ACCTCTTCCA GCACCATCAA AGTTGCAATT AGTACGACCC 360 CAAATACGTG CCATTTTGGT GCCCGGTGGA GCCCAAAACC ACCAACTTTG ACCTCTCTCG 4805 |||||||||| ||||||| || ||| ||||| |||||||||| ||||||| || |||||||||| CAAATACGTG CCATTTTAGT GCCAGGTGGG GCCCAAAACC ACCAACTCTG ACCTCTCTCG 420 AGACGTCGGC CACCTCCTAC GGGAGTCGCC GCTGCCCATA CGGTGTATGG ACAGTTGTTA 4745 |||||||| | |||||||||| ||| ||| || ||||| | ||||||| || ||||||||| AGACGTCGAC CACCTCCTAC GGGGACCGCT GCCGCCCAAA CGGTGTAGGG GCAGTTGTTA 480 TGGACCTCAA ATACACCGGA AGCATAAGTG T 4714 |||||||||| |||||||||| | |||||||| | TGGACCTCAA ATACACCGGA ACCATAAGTG T 511 hqPGS_C08HBa0235H18.1-_SGN-E306399- (5224 4714) ******************************************************************************** EST sequence 85 -strand 652 n (File: SGN-E213536-) 1 CCAAGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG ACAACCNTAT AGTTTGTACT 61 ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG 121 ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA 181 ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC 241 GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT 301 AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA 361 AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC 421 CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC 481 AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC 541 ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC 601 CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT AA Predicted gene structure (within gDNA segment 10702 to 3486): Exon 1 5509 5492 ( 18 n); cDNA 3 20 ( 18 n); score: 0.667 Intron 1 5491 5353 ( 139 n); Pd: 0.462 (s: 0), Pa: 0.000 (s: 0.66) Exon 2 5352 4718 ( 635 n); cDNA 21 652 ( 632 n); score: 0.787 MATCH C08HBa0235H18.1- SGN-E213536- 0.787 653 1.002 C PGS_C08HBa0235H18.1-_SGN-E213536- (5509 5492,5352 4718) Alignment (genomic DNA sequence = upper lines): AAAAGAAATG TGTACAAGGC AAATTAAAGA CAATGTCCAT CTTCAAAACA AATTTAACAA 5450 || ||||| || | || AAGGGAAATT TGGATCAG.. .......... .......... .......... .......... 20 AAAAGAGATT GGCTCAACTC AAGATTTCTA CTTAATTAAG CCACTTCAAG AGTATTTGTA 5390 .......... .......... .......... .......... .......... .......... 20 GGAATCTCCA ATGGGAAATT TGTTGTTTCA TTGTGAGTAG AGCCATAAGG ACAAAACATA 5330 | |||| ||| |||||| | | .......... .......... .......... .......CAA CACCATTAGG ACAAAAGACA 43 ACCTTGTAGT CTGTAGTCCA ACTCTGACAA GTAAAAGTAC TTGTTGGATC GTCTTGAGGA 5270 ||| | |||| |||| | | || | ||| ||||| || | |||| ||||| |||||| || ACCNTATAGT TTGTACTACC ACCAGGGCAA GTAAATGTGC TTGTAGGATC GTCTTGTGGG 103 TAACTATAGG CATCGGGACA TCTTTGTTTG AAAAATCTTG ACAAATCGGT AGGACCACAT 5210 || ||||| | |||||||||| ||||| ||| |||||| | | |||| || || ||| |||||| TAGCTATAAG CATCGGGACA TCTTTTCTTG AAAAATTTGG ACAACTCTGT AGGGCCACAT 163 GGACCTTGAG TGCAACAATA TTGTTGTCCT CCGAATGTAG TACAAGGGTT GTTACATCCT 5150 |||||||| | |||||||||| |||||||||| || || || | |||||||||| |||||||||| GGACCTTGGG TGCAACAATA TTGTTGTCCT CCAAACGTGG TACAAGGGTT GTTACATCCT 223 CCGGGTACCC TAAGTGAACC AGGGCATTCA CCGTTTATAT TAGCAACACA TTGAATTGGA 5090 || |||||| |||| | | ||| |||||| || ||||||| | || || ||||||| CCAGGTACCT TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA ATGAATTGCG 283 TGACATTTTC CCGGCCCAGG GTTAGTTGGG CCGAAAGACA TAGGGATGTT GAATCCATCA 5030 |||||||||| | | ||| || |||||| | |||| || | || || || |||||||| TGACATTTTC CTCCACTAGG TTTTGTTGGG GCAAAAGTCA TTGGAATATT AAATCCATCG 343 ATAACAGAAA TGTCCCAGAA ATCTAAGTTG CTAAATTGAT TCAAAGCGTA TTCAGCTAAG 4970 | | ||||| ||||||| || |||||||||| ||||| || | ||| ||||| || |||| | ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG CTAAACTGGT CCAAGGCGTA CTCGGCTAGG 403 GTGTTTGGTG GTTTACCCCA TCCTTTGCAT TCCAAGACTC CACCACAATC ACCGGTCTGG 4910 |||||||| | |||| ||||| ||| | || | ||||||| |||||||||| ||| ||||| GTGTTTGGGG GTTTGCCCCA TCCGGTACAC TGTAAGACTC CACCACAATC ACCAGTCTGA 463 CACCAACCTC TACCAGCACC ATCAAAATTG CAATTAGTAC GACCCCAAAT ACGTGCCATT 4850 || ||||| | || ||| | || ||| ||| ||| ||||| ||||||| || ||||||||| CATGTACCTC TGCCTGCAGC ATTAAAGTTG CAACCAGTAC GACCCCATAT ACGTGCCATC 523 TTGGTGCCCG GTGGAGCCCA AAACCACCAA CTTTGACCTC TCTCGAGACG TCGGCCACCT 4790 || || ||| ||||| | ||| |||| |||| | |||||| ||| ||||| TTAGTTCCCC TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG TCGACCACCG 583 CCTACGGGAG TCGCCGCTGC CCATACGGTG TATGGACAGT TGTTATGGAC CTCAAATACA 4730 |||| |||| ||| || || ||| |||||| |||||||||| |||| | || ||| ||| | CCTATCGGAG TCGATGCCGC CCAAACGGTG TATGGACAGT TGTTGCGTAC CTC-AAT--A 640 CCGGAAGCAT AA 4718 || ||||| || GTGGCAGCAT AA 652 hqPGS_C08HBa0235H18.1-_SGN-E213536- (5352 4718) ******************************************************************************** EST sequence 281 -strand 748 n (File: SGN-E542649-) 1 GTAATGAACA AAACTCAACC ATTTTGAACA AGAAAGAGGT GGCTACACTC ATGATGAATC 61 TACTTATTAA GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC 121 ATTGTGAGTA GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA 181 AGTAAAAGTA CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT 241 GAAAAATCTT GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC 301 TCCGAATGTT GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC 361 ACCGTTTATA TTGGCTGTGC ATTGAATTGG ATGACATTTT CCAGGGCCAG GCTTAGTTGG 421 GCCAAAAGAC ATAGGGATGT TGAATCCATC AATAACAGAA ATATCCCAAA AATCTAGGTT 481 ACCAAACTGG TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA 541 ATCCAGGACT CCACCACAAT CACCAGTCTG GCACCAACCT CTTCCAGCAC CATCAAAGTT 601 GCAATTAGTA CGACCCCAAA TACGTGCCAT TTTAGTGCCA GGTGGGGCCC AAAACCACCA 661 ACTCTGACCT CTCTCGAGAC GTCGACCACC TCCTACGGGG ACCGCTGCCG CCCAAACGGT 721 GTAGGGGCAG TTGTTATGGA CCTCAAAT Predicted gene structure (within gDNA segment 6936 to 3557): Exon 1 5423 4733 ( 691 n); cDNA 59 748 ( 690 n); score: 0.926 MATCH C08HBa0235H18.1- SGN-E542649- 0.926 691 0.924 C PGS_C08HBa0235H18.1-_SGN-E542649- (5423 4733) Alignment (genomic DNA sequence = upper lines): TCTACTTAAT TAAGCCACTT CAAGAGTATT TGTAGGAATC TCCAATGGGA AATTTGTTGT 5364 ||||||| || ||||| |||| |||||||| | |||||| ||| |||||||||| |||||||||| TCTACTT-AT TAAGCAACTT CAAGAGTACT TGTAGGCATC TCCAATGGGA AATTTGTTGT 117 TTCATTGTGA GTAGAGCCAT AAGGACAAAA CATAACCTTG TAGTCTGTAG TCCAACTCTG 5304 |||||||||| |||||||||| ||||||| || ||| | |||| |||||||||| |||||||||| TTCATTGTGA GTAGAGCCAT AAGGACAGAA CATTATCTTG TAGTCTGTAG TCCAACTCTG 177 ACAAGTAAAA GTACTTGTTG GATCGTCTTG AGGATAACTA TAGGCATCGG GACATCTTTG 5244 |||||||||| ||||| |||| |||||||||| ||| |||||| |||||||| | |||||||||| ACAAGTAAAA GTACTAGTTG GATCGTCTTG AGGGTAACTA TAGGCATCAG GACATCTTTG 237 TTTGAAAAAT CTTGACAAAT CGGTAGGACC ACATGGACCT TGAGTGCAAC AATATTGTTG 5184 |||||||||| |||||||| | | |||||||| ||||||||| ||| | |||| |||||||||| TTTGAAAAAT CTTGACAATT CAGTAGGACC ACATGGACCG TGATTACAAC AATATTGTTG 297 TCCTCCGAAT GTAGTACAAG GGTTGTTACA TCCTCCGGGT ACCCTAAGTG AACCAGGGCA 5124 |||||||||| || ||||||| |||||||||| |||||| ||| |||||||||| |||||||||| TCCTCCGAAT GTTGTACAAG GGTTGTTACA TCCTCCAGGT ACCCTAAGTG AACCAGGGCA 357 TTCACCGTTT ATATTAGCAA CACATTGAAT TGGATGACAT TTTCCCGGCC CAGGGTTAGT 5064 |||||||||| ||||| || |||||||| |||||||||| ||||| || | |||| ||||| TTCACCGTTT ATATTGGCTG TGCATTGAAT TGGATGACAT TTTCCAGGGC CAGGCTTAGT 417 TGGGCCGAAA GACATAGGGA TGTTGAATCC ATCAATAACA GAAATGTCCC AGAAATCTAA 5004 |||||| ||| |||||||||| |||||||||| |||||||||| ||||| |||| | ||||||| TGGGCCAAAA GACATAGGGA TGTTGAATCC ATCAATAACA GAAATATCCC AAAAATCTAG 477 GTTGCTAAAT TGATTCAAAG CGTATTCAGC TAAGGTGTTT GGTGGTTTAC CCCATCCTTT 4944 ||| | ||| || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTACCAAAC TGGTTCAAAG CGTATTCAGC TAAGGTGTTT GGTGGTTTAC CCCATCCTTT 537 GCATTCCAAG ACTCCACCAC AATCACCGGT CTGGCACCAA CCTCTACCAG CACCATCAAA 4884 ||| |||| | |||||||||| ||||||| || |||||||||| ||||| |||| |||||||||| GCAATCCAGG ACTCCACCAC AATCACCAGT CTGGCACCAA CCTCTTCCAG CACCATCAAA 597 ATTGCAATTA GTACGACCCC AAATACGTGC CATTTTGGTG CCCGGTGGAG CCCAAAACCA 4824 ||||||||| |||||||||| |||||||||| |||||| ||| || ||||| | |||||||||| GTTGCAATTA GTACGACCCC AAATACGTGC CATTTTAGTG CCAGGTGGGG CCCAAAACCA 657 CCAACTTTGA CCTCTCTCGA GACGTCGGCC ACCTCCTACG GGAGTCGCCG CTGCCCATAC 4764 |||||| ||| |||||||||| ||||||| || |||||||||| || ||| | | ||||| || CCAACTCTGA CCTCTCTCGA GACGTCGACC ACCTCCTACG GGGACCGCTG CCGCCCAAAC 717 GGTGTATGGA CAGTTGTTAT GGACCTCAAA T 4733 |||||| || |||||||||| |||||||||| | GGTGTAGGGG CAGTTGTTAT GGACCTCAAA T 748 hqPGS_C08HBa0235H18.1-_SGN-E542649- (5423 4733) ******************************************************************************** EST sequence 423 -strand 581 n (File: SGN-E301650-) 1 GTCCAACTCT GACAAGTAAA AGTACTAGTT GGATCGTCTT GAGGGTAACT ATAGGCATCA 61 GGACATCTTT GTTTGAAAAA TCTTGACAAT TCAGTAGGAC CACATGGACC GTGATTACAA 121 CAATATTGTT GTCCTCCGAA TGTTGTACAA GGGTTGTTAC ATCCTCCAGG TACCCTAAGT 181 GAACCAGGGC ATTCACCGTT TATATTGGCT GTGCATTGAA TTGGATGACA TTTTCCAGGG 241 CCAGGCTTAG TTGGGCCAAA AGACATAGGG ATGTTGAATC CATCAATAAC AGAAATATCC 301 CAAAAATCTA GGTTACCAAA CTGGTTCAAA GCGTATTCAG CTAAGGTGTT TGGTGGTTTA 361 CCCCATCCTT TGCAATCCAG GACTCCACCA CAATCACCAG TCTGGCACCA ACCTCTTCCA 421 GCACCATCAA AGTTGCAATT AGTACGACCC CAAATACGTG CCATTTTAGT GCCAGGTGGG 481 GCCCAAAACC ACCAACTCTG ACCTCTCTCG AGACGTCGAC CACCTCCTAC GCGGACCGCT 541 GCCGCCCAAA CGGTGTAGGG GCAGTTGTTA TGGACCTCAA A Predicted gene structure (within gDNA segment 5924 to 3567): Exon 1 5314 4734 ( 581 n); cDNA 1 581 ( 581 n); score: 0.923 MATCH C08HBa0235H18.1- SGN-E301650- 0.923 581 1.000 C PGS_C08HBa0235H18.1-_SGN-E301650- (5314 4734) Alignment (genomic DNA sequence = upper lines): GTCCAACTCT GACAAGTAAA AGTACTTGTT GGATCGTCTT GAGGATAACT ATAGGCATCG 5255 |||||||||| |||||||||| |||||| ||| |||||||||| |||| ||||| ||||||||| GTCCAACTCT GACAAGTAAA AGTACTAGTT GGATCGTCTT GAGGGTAACT ATAGGCATCA 60 GGACATCTTT GTTTGAAAAA TCTTGACAAA TCGGTAGGAC CACATGGACC TTGAGTGCAA 5195 |||||||||| |||||||||| ||||||||| || ||||||| |||||||||| ||| | ||| GGACATCTTT GTTTGAAAAA TCTTGACAAT TCAGTAGGAC CACATGGACC GTGATTACAA 120 CAATATTGTT GTCCTCCGAA TGTAGTACAA GGGTTGTTAC ATCCTCCGGG TACCCTAAGT 5135 |||||||||| |||||||||| ||| |||||| |||||||||| ||||||| || |||||||||| CAATATTGTT GTCCTCCGAA TGTTGTACAA GGGTTGTTAC ATCCTCCAGG TACCCTAAGT 180 GAACCAGGGC ATTCACCGTT TATATTAGCA ACACATTGAA TTGGATGACA TTTTCCCGGC 5075 |||||||||| |||||||||| |||||| || ||||||| |||||||||| |||||| || GAACCAGGGC ATTCACCGTT TATATTGGCT GTGCATTGAA TTGGATGACA TTTTCCAGGG 240 CCAGGGTTAG TTGGGCCGAA AGACATAGGG ATGTTGAATC CATCAATAAC AGAAATGTCC 5015 ||||| |||| ||||||| || |||||||||| |||||||||| |||||||||| |||||| ||| CCAGGCTTAG TTGGGCCAAA AGACATAGGG ATGTTGAATC CATCAATAAC AGAAATATCC 300 CAGAAATCTA AGTTGCTAAA TTGATTCAAA GCGTATTCAG CTAAGGTGTT TGGTGGTTTA 4955 || ||||||| ||| | ||| || |||||| |||||||||| |||||||||| |||||||||| CAAAAATCTA GGTTACCAAA CTGGTTCAAA GCGTATTCAG CTAAGGTGTT TGGTGGTTTA 360 CCCCATCCTT TGCATTCCAA GACTCCACCA CAATCACCGG TCTGGCACCA ACCTCTACCA 4895 |||||||||| |||| |||| |||||||||| |||||||| | |||||||||| |||||| ||| CCCCATCCTT TGCAATCCAG GACTCCACCA CAATCACCAG TCTGGCACCA ACCTCTTCCA 420 GCACCATCAA AATTGCAATT AGTACGACCC CAAATACGTG CCATTTTGGT GCCCGGTGGA 4835 |||||||||| | |||||||| |||||||||| |||||||||| ||||||| || ||| ||||| GCACCATCAA AGTTGCAATT AGTACGACCC CAAATACGTG CCATTTTAGT GCCAGGTGGG 480 GCCCAAAACC ACCAACTTTG ACCTCTCTCG AGACGTCGGC CACCTCCTAC GGGAGTCGCC 4775 |||||||||| ||||||| || |||||||||| |||||||| | |||||||||| | | ||| GCCCAAAACC ACCAACTCTG ACCTCTCTCG AGACGTCGAC CACCTCCTAC GCGGACCGCT 540 GCTGCCCATA CGGTGTATGG ACAGTTGTTA TGGACCTCAA A 4734 || ||||| | ||||||| || ||||||||| |||||||||| | GCCGCCCAAA CGGTGTAGGG GCAGTTGTTA TGGACCTCAA A 581 hqPGS_C08HBa0235H18.1-_SGN-E301650- (5314 4734) ******************************************************************************** EST sequence 200 -strand 473 n (File: SGN-E334899-) 1 TGTGCAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGA TTGTTACATC CTCCGGGCAC 61 CCTAAGTGAA CCAGGACATT CACCATTTAT ATTAGCCGTA CAATGAATTG CATGGCATTT 121 CCCTCCACTA GGATTGGTCG GGGCGAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 181 AATGTCCCAG AAATCTAGGT TGCTAAACTG GTCCAAGGCG TACTCGGCCA GGGTGTTTGG 241 TGGTTTGCCC CACCCGGTAC ATTGCAAGAC CCCACCACAA TCACCAGTCT GACATGAACC 301 TCTACCAGCA CCATCAAAGT TGCAATTCGT ACGACCCCAT ATACGTGCCA TCTTAGTGCC 361 CCTCGGTGCA TTGATGACCC ATGTTTGGCC TCGATCAAGA CGTCGACCAC CGCCTATTGG 421 GGTCGACGCC GCCCAGACGG TGTATGGACA GTTGTTGCGT ACCTCGAAAG TGG Predicted gene structure (within gDNA segment 5820 to 547): Exon 1 5200 4734 ( 467 n); cDNA 2 468 ( 467 n); score: 0.816 MATCH C08HBa0235H18.1- SGN-E334899- 0.816 467 0.987 C PGS_C08HBa0235H18.1-_SGN-E334899- (5200 4734) Alignment (genomic DNA sequence = upper lines): GTGCAACAAT ATTGTTGTCC TCCGAATGTA GTACAAGGGT TGTTACATCC TCCGGGTACC 5141 |||||||||| |||||||||| |||||| || |||||||| | |||||||||| |||||| ||| GTGCAACAAT ATTGTTGTCC TCCGAACGTG GTACAAGGAT TGTTACATCC TCCGGGCACC 61 CTAAGTGAAC CAGGGCATTC ACCGTTTATA TTAGCAACAC ATTGAATTGG ATGACATTTT 5081 |||||||||| |||| ||||| ||| |||||| ||||| || | ||||||| ||| ||||| CTAAGTGAAC CAGGACATTC ACCATTTATA TTAGCCGTAC AATGAATTGC ATGGCATTTC 121 CCCGGCCCAG GGTTAGTTGG GCCGAAAGAC ATAGGGATGT TGAATCCATC AATAACAGAA 5021 || | || | || || || | |||||| | || || || | | |||||||| | | |||| CCTCCACTAG GATTGGTCGG GGCGAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 181 ATGTCCCAGA AATCTAAGTT GCTAAATTGA TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT 4961 |||||||||| |||||| ||| |||||| || | ||| |||| | || || | |||||||||| ATGTCCCAGA AATCTAGGTT GCTAAACTGG TCCAAGGCGT ACTCGGCCAG GGTGTTTGGT 241 GGTTTACCCC ATCCTTTGCA TTCCAAGACT CCACCACAAT CACCGGTCTG GCACCAACCT 4901 ||||| |||| | || | || || |||||| |||||||||| |||| ||||| || ||||| GGTTTGCCCC ACCCGGTACA TTGCAAGACC CCACCACAAT CACCAGTCTG ACATGAACCT 301 CTACCAGCAC CATCAAAATT GCAATTAGTA CGACCCCAAA TACGTGCCAT TTTGGTGCCC 4841 |||||||||| ||||||| || |||||| ||| |||||||| | |||||||||| || |||||| CTACCAGCAC CATCAAAGTT GCAATTCGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC 361 GGTGGAGCCC AAAACCACCA ACTTTGACCT CTCTCGAGAC GTCGGCCACC TCCTACGGGA 4781 || || | ||| |||| ||| | || |||| |||| ||||| |||| || CTCGGTGCAT TGATGACCCA TGTTTGGCCT CGATCAAGAC GTCGACCACC GCCTATTGGG 421 GTCGCCGCTG CCCATACGGT GTATGGACAG TTGTTATGGA CCTCAAA 4734 |||| ||| | |||| ||||| |||||||||| ||||| | | |||| || GTCGACGCCG CCCAGACGGT GTATGGACAG TTGTTGCGTA CCTCGAA 468 hqPGS_C08HBa0235H18.1-_SGN-E334899- (5200 4734) ******************************************************************************** EST sequence 115 -strand 598 n (File: SGN-E253452-) 1 TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA 61 TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT 121 TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 181 ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 241 TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 301 GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 361 GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 421 CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 481 CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 541 GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT AGTGGCAG Predicted gene structure (within gDNA segment 10212 to 3536): Exon 1 5323 4735 ( 589 n); cDNA 1 589 ( 589 n); score: 0.796 MATCH C08HBa0235H18.1- SGN-E253452- 0.796 589 0.985 C PGS_C08HBa0235H18.1-_SGN-E253452- (5323 4735) Alignment (genomic DNA sequence = upper lines): TAGTCTGTAG TCCAACTCTG ACAAGTAAAA GTACTTGTTG GATCGTCTTG AGGATAACTA 5264 |||| |||| | | || | |||||||| || ||||| | |||||||||| || || ||| TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA 60 TAGGCATCGG GACATCTTTG TTTGAAAAAT CTTGACAAAT CGGTAGGACC ACATGGACCT 5204 || ||||||| ||||||||| ||||||||| | ||||| | | ||||| || |||||||||| TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT 120 TGAGTGCAAC AATATTGTTG TCCTCCGAAT GTAGTACAAG GGTTGTTACA TCCTCCGGGT 5144 || ||||||| |||||||||| |||||| || || ||||||| |||||||||| |||||| ||| TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 180 ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTAGCAA CACATTGAAT TGGATGACAT 5084 ||| |||| | | ||| || |||||| ||| ||||| || || ||||| || |||||| ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 240 TTTCCCGGCC CAGGGTTAGT TGGGCCGAAA GACATAGGGA TGTTGAATCC ATCAATAACA 5024 ||||| | ||| || || |||| | ||| | ||| || | | || ||||| ||| | | | TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 300 GAAATGTCCC AGAAATCTAA GTTGCTAAAT TGATTCAAAG CGTATTCAGC TAAGGTGTTT 4964 |||||||||| | |||||||| ||||||||| || | ||| | |||| || || || ||||||| GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 360 GGTGGTTTAC CCCATCCTTT GCATTCCAAG ACTCCACCAC AATCACCGGT CTGGCACCAA 4904 || ||||| | ||||||| | || | ||| |||||||||| ||||||| || ||| || | GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 420 CCTCTACCAG CACCATCAAA ATTGCAATTA GTACGACCCC AAATACGTGC CATTTTGGTG 4844 ||||| || | || ||| ||| |||||| | |||||||||| | |||||||| ||| || || CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 480 CCCGGTGGAG CCCAAAACCA CCAACTTTGA CCTCTCTCGA GACGTCGGCC ACCTCCTACG 4784 ||| |||| | | ||| |||| |||| | || ||||||| || ||| |||| CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 540 GGAGTCGCCG CTGCCCATAC GGTGTATGGA CAGTTGTTAT GGACCTCAA 4735 ||||||| | | ||||| || |||||||||| |||||||| | ||||||| GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAA 589 hqPGS_C08HBa0235H18.1-_SGN-E253452- (5323 4735) ******************************************************************************** EST sequence 156 -strand 597 n (File: SGN-E253886-) 1 ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT 61 ATAAGCATCG GGACATCTTT TCTTGAAGAA TTTGCACAAC TCTGTAGGGC CACATGGACC 121 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 181 TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 241 TTTTCCTCCA TTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 301 AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 361 TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT 421 ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATATTAGT 481 TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT 541 CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGC Predicted gene structure (within gDNA segment 10222 to 3556): Exon 1 5323 4735 ( 589 n); cDNA 2 590 ( 589 n); score: 0.791 MATCH C08HBa0235H18.1- SGN-E253886- 0.791 589 0.987 C PGS_C08HBa0235H18.1-_SGN-E253886- (5323 4735) Alignment (genomic DNA sequence = upper lines): TAGTCTGTAG TCCAACTCTG ACAAGTAAAA GTACTTGTTG GATCGTCTTG AGGATAACTA 5264 |||| |||| | | || | |||||||| || ||||| | |||||||||| || || ||| TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA 61 TAGGCATCGG GACATCTTTG TTTGAAAAAT CTTGACAAAT CGGTAGGACC ACATGGACCT 5204 || ||||||| ||||||||| ||||| ||| | |||| | | ||||| || |||||||||| TAAGCATCGG GACATCTTTT CTTGAAGAAT TTGCACAACT CTGTAGGGCC ACATGGACCT 121 TGAGTGCAAC AATATTGTTG TCCTCCGAAT GTAGTACAAG GGTTGTTACA TCCTCCGGGT 5144 || ||||||| |||||||||| |||||| || || ||||||| |||||||||| |||||| ||| TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 181 ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTAGCAA CACATTGAAT TGGATGACAT 5084 ||| |||| | | ||| || |||||| ||| ||||| || || ||||| || |||||| ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 241 TTTCCCGGCC CAGGGTTAGT TGGGCCGAAA GACATAGGGA TGTTGAATCC ATCAATAACA 5024 ||||| ||| || || |||| | ||| | ||| || | | || ||||| ||| | | | TTTCCTCCAT TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 301 GAAATGTCCC AGAAATCTAA GTTGCTAAAT TGATTCAAAG CGTATTCAGC TAAGGTGTTT 4964 |||||||||| | |||||||| ||||||||| || | ||| | |||| || || || ||||||| GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 361 GGTGGTTTAC CCCATCCTTT GCATTCCAAG ACTCCACCAC AATCACCGGT CTGGCACCAA 4904 || ||||| | ||||||| | || | ||| |||||||||| ||||||| || ||| || | GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 421 CCTCTACCAG CACCATCAAA ATTGCAATTA GTACGACCCC AAATACGTGC CATTTTGGTG 4844 ||||| || | || ||| ||| |||||| | |||||||||| | |||||||| ||| || || CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATATTAGTT 481 CCCGGTGGAG CCCAAAACCA CCAACTTTGA CCTCTCTCGA GACGTCGGCC ACCTCCTACG 4784 ||| |||| | | ||| |||| |||| | || ||||||| || ||| |||| CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 541 GGAGTCGCCG CTGCCCATAC GGTGTATGGA CAGTTGTTAT GGACCTCAA 4735 ||||||| | | ||||| || |||||||||| |||||||| | ||||||| GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAA 590 hqPGS_C08HBa0235H18.1-_SGN-E253886- (5323 4735) ******************************************************************************** EST sequence 154 -strand 595 n (File: SGN-E254383-) 1 AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT 61 AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 121 GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 181 CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 241 TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 301 AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 361 GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 421 CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 481 CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 541 GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGC Predicted gene structure (within gDNA segment 10202 to 3556): Exon 1 5322 4735 ( 588 n); cDNA 1 588 ( 588 n); score: 0.796 MATCH C08HBa0235H18.1- SGN-E254383- 0.796 588 0.988 C PGS_C08HBa0235H18.1-_SGN-E254383- (5322 4735) Alignment (genomic DNA sequence = upper lines): AGTCTGTAGT CCAACTCTGA CAAGTAAAAG TACTTGTTGG ATCGTCTTGA GGATAACTAT 5263 ||| |||| | | || | |||||||| | | ||||| || ||||||||| || || |||| AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT 60 AGGCATCGGG ACATCTTTGT TTGAAAAATC TTGACAAATC GGTAGGACCA CATGGACCTT 5203 | |||||||| |||||||| ||||||||| | ||||| || ||||| ||| |||||||||| AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 120 GAGTGCAACA ATATTGTTGT CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA 5143 | |||||||| |||||||||| ||||| || | | |||||||| |||||||||| ||||| |||| GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 180 CCCTAAGTGA ACCAGGGCAT TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT 5083 || |||| | | ||| ||| ||||| |||| |||| || || |||||| | ||||||| CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 240 TTCCCGGCCC AGGGTTAGTT GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG 5023 |||| | ||| || ||| ||| | |||| ||| || || || |||||| || | | || TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 300 AAATGTCCCA GAAATCTAAG TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG 4963 |||||||||| ||||||||| |||||||| | | | ||| || ||| || ||| | |||||||| AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 360 GTGGTTTACC CCATCCTTTG CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC 4903 | ||||| || |||||| | || | |||| |||||||||| |||||| ||| || || || GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 420 CTCTACCAGC ACCATCAAAA TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC 4843 |||| || || | ||| ||| |||||| || |||||||||| ||||||||| || || || | CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 480 CCGGTGGAGC CCAAAACCAC CAACTTTGAC CTCTCTCGAG ACGTCGGCCA CCTCCTACGG 4783 || ||||| | | || |||| | ||| | ||| |||||| ||| || |||| | CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 540 GAGTCGCCGC TGCCCATACG GTGTATGGAC AGTTGTTATG GACCTCAA 4735 |||||| || ||||| ||| |||||||||| ||||||| | ||||||| GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAA 588 hqPGS_C08HBa0235H18.1-_SGN-E254383- (5322 4735) ******************************************************************************** EST sequence 180 -strand 643 n (File: SGN-E213897-) 1 AAGGGGAAAT TTGAATCAGC AACACCATTA GGACAAAAGA CANCCNTATA GTTTGTACTA 61 CCACCAGGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG 121 ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA 181 ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC 241 GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT 301 AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA 361 AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC 421 CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC 481 AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC 541 ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC 601 CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTG Predicted gene structure (within gDNA segment 10702 to 3576): Exon 1 6312 6289 ( 24 n); cDNA 3 24 ( 22 n); score: 0.667 Intron 1 6288 5348 ( 941 n); Pd: 0.806 (s: 0), Pa: 0.000 (s: 0.68) Exon 2 5347 4737 ( 611 n); cDNA 25 636 ( 612 n); score: 0.791 MATCH C08HBa0235H18.1- SGN-E213897- 0.791 635 0.988 C PGS_C08HBa0235H18.1-_SGN-E213897- (6312 6289,5347 4737) Alignment (genomic DNA sequence = upper lines): GGAGGAGTCT GAAATCAACA ACGTGTAACT GCTTGGGCAG AATAAAAGAA CTTAAATTGT 6253 || | | | | | ||||| || || GGGGAAATTT G-AATCAGCA AC-A...... .......... .......... .......... 24 TTTAATAGAA TTTTTTAAGT AACATTGCAA TTATTTAAGC AATACGAACG CCCAATTGTA 6193 .......... .......... .......... .......... .......... .......... 24 TTTTATTTTA TTTTTTTATA ATAAAAGAGT TTTGGAAGTA ATGAATTTTA ATACAATATC 6133 .......... .......... .......... .......... .......... .......... 24 AATATTTAAA TAATGTTGAA TTCTTAGCTT AGGCATTGAA TCGCAATTGA AAGTGAAAGC 6073 .......... .......... .......... .......... .......... .......... 24 CCTTTTTTGC TATTTCAAGT TATGAATTCA GATACTAAAG GATAACGTCT TTTAGAAGGA 6013 .......... .......... .......... .......... .......... .......... 24 AGATATTAAT GGGGTAAGTG ATTTTTAAAA GTTGACTTTT ATATAAAATT ATCTTCTTCT 5953 .......... .......... .......... .......... .......... .......... 24 TTTTTCTTTT TCTTTTTTGT ATATCGACTC ATTTAATTAT CAGTTTAACT TAATGTTCGA 5893 .......... .......... .......... .......... .......... .......... 24 ATCTTTAAGC TTTTTAATTA ATATTGAATT TATTATTTCT TTAAACTTAT AAATTCAAAT 5833 .......... .......... .......... .......... .......... .......... 24 CTAAACACTT ATTAAAATTT TAATGAATTT TCATATACTA TAGTATACTT GAAAATGTTC 5773 .......... .......... .......... .......... .......... .......... 24 CAAAAGCCGC CAATAAAAAA ATATTTCCAT CTGTTTGACT TATATTATGA CATGTAACGA 5713 .......... .......... .......... .......... .......... .......... 24 GTTGTCCCTA CAATTTTATA TTTTCAGATC TAGGTACTTT AATATATTAA CTAGACTAAT 5653 .......... .......... .......... .......... .......... .......... 24 TTTTTTTCAT TATAATTAAA AATTTTAAGA AAAAAACTGT ACTCCAGATA TAATTTCAAT 5593 .......... .......... .......... .......... .......... .......... 24 TTAAAATTAA AATACCATAT ATAAGACAAA GCATCGATCA TAGATTGTTA TTCAGATCTT 5533 .......... .......... .......... .......... .......... .......... 24 AGCCACTTCA AACAAACAAA TGTAAAAGAA ATGTGTACAA GGCAAATTAA AGACAATGTC 5473 .......... .......... .......... .......... .......... .......... 24 CATCTTCAAA ACAAATTTAA CAAAAAAGAG ATTGGCTCAA CTCAAGATTT CTACTTAATT 5413 .......... .......... .......... .......... .......... .......... 24 AAGCCACTTC AAGAGTATTT GTAGGAATCT CCAATGGGAA ATTTGTTGTT TCATTGTGAG 5353 .......... .......... .......... .......... .......... .......... 24 TAGAGCCATA AGGACAAAAC ATAACCTTGT AGTCTGTAGT -CCAACTCTG ACAAGTAAAA 5294 |||| ||||||||| | | || | | ||| |||| | ||| | | |||||||| .....CCATT AGGACAAAAG ACANCCNTAT AGTTTGTACT ACCACCAGGG GCAAGTAAAT 79 GTACTTGTTG GATCGTCTTG AGGATAACTA TAGGCATCGG GACATCTTTG TTTGAAAAAT 5234 || ||||| | |||||||||| || || ||| || ||||||| ||||||||| ||||||||| GTGCTTGTAG GATCGTCTTG TGGGTAGCTA TAAGCATCGG GACATCTTTT CTTGAAAAAT 139 CTTGACAAAT CGGTAGGACC ACATGGACCT TGAGTGCAAC AATATTGTTG TCCTCCGAAT 5174 | ||||| | | ||||| || |||||||||| || ||||||| |||||||||| |||||| || TTGGACAACT CTGTAGGGCC ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC 199 GTAGTACAAG GGTTGTTACA TCCTCCGGGT ACCCTAAGTG AACCAGGGCA TTCACCGTTT 5114 || ||||||| |||||||||| |||||| ||| ||| |||| | | ||| || |||||| ||| GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT 259 ATATTAGCAA CACATTGAAT TGGATGACAT TTTCCCGGCC CAGGGTTAGT TGGGCCGAAA 5054 ||||| || || ||||| || |||||| ||||| | ||| || || |||| | ||| ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA 319 GACATAGGGA TGTTGAATCC ATCAATAACA GAAATGTCCC AGAAATCTAA GTTGCTAAAT 4994 | ||| || | | || ||||| ||| | | | |||||||||| | |||||||| ||||||||| GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC 379 TGATTCAAAG CGTATTCAGC TAAGGTGTTT GGTGGTTTAC CCCATCCTTT GCATTCCAAG 4934 || | ||| | |||| || || || ||||||| || ||||| | ||||||| | || | ||| TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG 439 ACTCCACCAC AATCACCGGT CTGGCACCAA CCTCTACCAG CACCATCAAA ATTGCAATTA 4874 |||||||||| ||||||| || ||| || | ||||| || | || ||| ||| |||||| | ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA 499 GTACGACCCC AAATACGTGC CATTTTGGTG CCCGGTGGAG CCCAAAACCA CCAACTTTGA 4814 |||||||||| | |||||||| ||| || || ||| |||| | | ||| |||| GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG 559 CCTCTCTCGA GACGTCGGCC ACCTCCTACG GGAGTCGCCG CTGCCCATAC GGTGTATGGA 4754 |||| | || ||||||| || ||| |||| ||||||| | | ||||| || |||||||||| CCTCGATTGA GACGTCGACC ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA 619 CAGTTGTTAT GGACCTC 4737 |||||||| | ||||| CAGTTGTTGC GTACCTC 636 hqPGS_C08HBa0235H18.1-_SGN-E213897- (5347 4737) ******************************************************************************** EST sequence 118 -strand 716 n (File: SGN-E212860-) 1 AAAAATTACC AAAAAAAGAG ATGGGCTCAA CTCAAGATTT CTACTTAATT AAGCCACTCA 61 AAGAGTATTT GTAGGAATCT CCAATGGGAA ATTTGTTGTT TCATTGTGAG TAGAGCCATA 121 AGGACAAAAC ATAACCTNGT AGTCTGTAGT CCAACTCTGA CAAGTAAAAG TACTTGTTGG 181 ATCGTCTTGA GGATAACTAT AGGCATCGGG ACATCTTTGT TTGAAAAATC TTGACAAATC 241 GGTAGGACCA CATGGACCTT GAGTGCAACA ATATTGTTGT CCTCCGAATG TAGTACAAGG 301 GTTGTTACAT CCTCCGGGTA CCCTAAGTGA ACCAGGGCAT TCACCGTTTA TATTAGCAAC 361 ACATTGAATT GGATGACATT TTCCCGGCCC AGGGTTAGTT GGGCCGAAAG ACATAGGGAT 421 GTTGAATCCA TCAATAACAG AAATGTCCCA GAAATCTAAG TTGCTAAATT GATTCAAAGC 481 GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG CATTCCAAGA CTCCACCACA 541 ATCACCGGTC TGGCACCAAC CTCTACCAGC ACCATCAAAA TTGCAATTAG TACGACCCCA 601 AATACGTGCC ATTTTGGTGC CCGGTGGAGC CCAAAACCAC CAACTTTGAC CTCTCTCGAG 661 ACGTCGGCCA CCTCCTACGG GAGTCGCCGC TGCCCATACG GTGTATGGAC AGTTGT Predicted gene structure (within gDNA segment 6279 to 4147): Exon 1 5460 4747 ( 714 n); cDNA 3 716 ( 714 n); score: 0.989 MATCH C08HBa0235H18.1- SGN-E212860- 0.989 714 0.997 C PGS_C08HBa0235H18.1-_SGN-E212860- (5460 4747) Alignment (genomic DNA sequence = upper lines): AAATTTAACA AAAAAGAGAT TGGCTCAACT CAAGATTTCT ACTTAATTAA GCCACTTCAA 5401 ||||| | |||||||||| ||||||||| |||||||||| |||||||||| |||||| || AAATTACCAA AAAAAGAGAT GGGCTCAACT CAAGATTTCT ACTTAATTAA GCCACTCAAA 62 GAGTATTTGT AGGAATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA GAGCCATAAG 5341 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGTATTTGT AGGAATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA GAGCCATAAG 122 GACAAAACAT AACCTTGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA CTTGTTGGAT 5281 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| GACAAAACAT AACCTNGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA CTTGTTGGAT 182 CGTCTTGAGG ATAACTATAG GCATCGGGAC ATCTTTGTTT GAAAAATCTT GACAAATCGG 5221 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTCTTGAGG ATAACTATAG GCATCGGGAC ATCTTTGTTT GAAAAATCTT GACAAATCGG 242 TAGGACCACA TGGACCTTGA GTGCAACAAT ATTGTTGTCC TCCGAATGTA GTACAAGGGT 5161 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGGACCACA TGGACCTTGA GTGCAACAAT ATTGTTGTCC TCCGAATGTA GTACAAGGGT 302 TGTTACATCC TCCGGGTACC CTAAGTGAAC CAGGGCATTC ACCGTTTATA TTAGCAACAC 5101 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTACATCC TCCGGGTACC CTAAGTGAAC CAGGGCATTC ACCGTTTATA TTAGCAACAC 362 ATTGAATTGG ATGACATTTT CCCGGCCCAG GGTTAGTTGG GCCGAAAGAC ATAGGGATGT 5041 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGAATTGG ATGACATTTT CCCGGCCCAG GGTTAGTTGG GCCGAAAGAC ATAGGGATGT 422 TGAATCCATC AATAACAGAA ATGTCCCAGA AATCTAAGTT GCTAAATTGA TTCAAAGCGT 4981 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAATCCATC AATAACAGAA ATGTCCCAGA AATCTAAGTT GCTAAATTGA TTCAAAGCGT 482 ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA TTCCAAGACT CCACCACAAT 4921 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA TTCCAAGACT CCACCACAAT 542 CACCGGTCTG GCACCAACCT CTACCAGCAC CATCAAAATT GCAATTAGTA CGACCCCAAA 4861 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCGGTCTG GCACCAACCT CTACCAGCAC CATCAAAATT GCAATTAGTA CGACCCCAAA 602 TACGTGCCAT TTTGGTGCCC GGTGGAGCCC AAAACCACCA ACTTTGACCT CTCTCGAGAC 4801 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACGTGCCAT TTTGGTGCCC GGTGGAGCCC AAAACCACCA ACTTTGACCT CTCTCGAGAC 662 GTCGGCCACC TCCTACGGGA GTCGCCGCTG CCCATACGGT GTATGGACAG TTGT 4747 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| GTCGGCCACC TCCTACGGGA GTCGCCGCTG CCCATACGGT GTATGGACAG TTGT 716 hqPGS_C08HBa0235H18.1-_SGN-E212860- (5460 4747) ******************************************************************************** EST sequence 392 -strand 645 n (File: SGN-E258673-) 1 ATCAGTACTT GCAGGCATCT CCAAGGGGAA ATTTGGATCA GCAACACCAT TAGGACAAAA 61 AACAACCCTA TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG 121 TGGGTAGCTA TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC 181 ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 241 TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 301 TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 361 ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 421 TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 481 CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC 541 CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 601 ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTT Predicted gene structure (within gDNA segment 10912 to 3766): Exon 1 5399 4749 ( 651 n); cDNA 4 645 ( 642 n); score: 0.788 MATCH C08HBa0235H18.1- SGN-E258673- 0.788 651 1.009 C PGS_C08HBa0235H18.1-_SGN-E258673- (5399 4749) Alignment (genomic DNA sequence = upper lines): AGTATTTGTA GGAATCTCCA ATGGGAAATT TGTTGTTTCA TTGTGAGTAG AGCCATAAGG 5340 |||| ||| | || ||||||| | |||||||| || | ||| | | | | |||| ||| AGTACTTGCA GGCATCTCCA AGGGGAAATT TG--G-ATCA --G-CA--AC A-CCATTAGG 54 ACAAAACATA ACCTTGTAGT CTGTAGTCCA ACTCTGACAA GTAAAAGTAC TTGTTGGATC 5280 |||||| | | ||| | |||| |||| | | || | ||| ||||| || | |||| ||||| ACAAAAAACA ACCCTATAGT TTGTACTACC ACCAGGGCAA GTAAATGTGC TTGTAGGATC 114 GTCTTGAGGA TAACTATAGG CATCGGGACA TCTTTGTTTG AAAAATCTTG ACAAATCGGT 5220 |||||| || || ||||| | |||||||||| ||||| ||| |||||| | | |||| || || GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG AAAAATTTGG ACAACTCTGT 174 AGGACCACAT GGACCTTGAG TGCAACAATA TTGTTGTCCT CCGAATGTAG TACAAGGGTT 5160 ||| |||||| |||||||| | |||||||||| |||||||||| || || || | |||||||||| AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT CCAAACGTGG TACAAGGGTT 234 GTTACATCCT CCGGGTACCC TAAGTGAACC AGGGCATTCA CCGTTTATAT TAGCAACACA 5100 |||||||||| || |||||| |||| | | ||| |||||| || ||||||| | || || GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA 294 TTGAATTGGA TGACATTTTC CCGGCCCAGG GTTAGTTGGG CCGAAAGACA TAGGGATGTT 5040 ||||||| |||||||||| | | ||| || |||||| | |||| || | || || || ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG GCAAAAGTCA TTGGAATATT 354 GAATCCATCA ATAACAGAAA TGTCCCAGAA ATCTAAGTTG CTAAATTGAT TCAAAGCGTA 4980 |||||||| | | ||||| ||||||| || |||||||||| ||||| || | ||| ||||| AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG CTAAACTGGT CCAAGGCGTA 414 TTCAGCTAAG GTGTTTGGTG GTTTACCCCA TCCTTTGCAT TCCAAGACTC CACCACAATC 4920 || |||| | |||||||| | |||| ||||| ||| | || | ||||||| |||||||||| CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC TGTAAGACTC CACCACAATC 474 ACCGGTCTGG CACCAACCTC TACCAGCACC ATCAAAATTG CAATTAGTAC GACCCCAAAT 4860 ||| ||||| || ||||| | || ||| | || ||| ||| ||| ||||| ||||||| || ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG CAACCAGTAC GACCCCATAT 534 ACGTGCCATT TTGGTGCCCG GTGGAGCCCA AAACCACCAA CTTTGACCTC TCTCGAGACG 4800 ||||||||| || || ||| ||||| | ||| |||| |||| | |||||| ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG 594 TCGGCCACCT CCTACGGGAG TCGCCGCTGC CCATACGGTG TATGGACAGT T 4749 ||| ||||| |||| |||| ||| || || ||| |||||| |||||||||| | TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG TATGGACAGT T 645 hqPGS_C08HBa0235H18.1-_SGN-E258673- (5399 4749) ******************************************************************************** EST sequence 360 -strand 441 n (File: SGN-E208167-) 1 GAGTGCAACA ATATTGTTGT CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA 61 CCCTAAGTGA ACCAGGGCAT TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT 121 TTCCCGGCCC AGGGTTAGTT GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG 181 AAATGTCCCA GAAATCTAAG TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG 241 GTGGTTTACC CCATCCTTTG CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC 301 CTCTACCAGC ACCATCAAAA TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC 361 CCGGTGGAGC CCAAAACCAC CAACTTTGAC CTCTCTCGAG ACGTCGGCCA CCTCCTACGG 421 GAGTCGCCGC TGCCCATACG G Predicted gene structure (within gDNA segment 5812 to 4162): Exon 1 5202 4762 ( 441 n); cDNA 1 441 ( 441 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E208167- 1.000 441 1.000 C PGS_C08HBa0235H18.1-_SGN-E208167- (5202 4762) Alignment (genomic DNA sequence = upper lines): GAGTGCAACA ATATTGTTGT CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA 5143 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGTGCAACA ATATTGTTGT CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA 60 CCCTAAGTGA ACCAGGGCAT TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT 5083 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCTAAGTGA ACCAGGGCAT TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT 120 TTCCCGGCCC AGGGTTAGTT GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG 5023 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCCGGCCC AGGGTTAGTT GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG 180 AAATGTCCCA GAAATCTAAG TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG 4963 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATGTCCCA GAAATCTAAG TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG 240 GTGGTTTACC CCATCCTTTG CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC 4903 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGGTTTACC CCATCCTTTG CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC 300 CTCTACCAGC ACCATCAAAA TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC 4843 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCTACCAGC ACCATCAAAA TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC 360 CCGGTGGAGC CCAAAACCAC CAACTTTGAC CTCTCTCGAG ACGTCGGCCA CCTCCTACGG 4783 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGGTGGAGC CCAAAACCAC CAACTTTGAC CTCTCTCGAG ACGTCGGCCA CCTCCTACGG 420 GAGTCGCCGC TGCCCATACG G 4762 |||||||||| |||||||||| | GAGTCGCCGC TGCCCATACG G 441 hqPGS_C08HBa0235H18.1-_SGN-E208167- (5202 4762) ******************************************************************************** EST sequence 34 -strand 709 n (File: SGN-E350897-) 1 TTAAAAAACT GAGCTATAAA GATTTTCATT ACGGTAGAGA TCAGTTGACT AATGAGGCGA 61 TTAAAATGAG AACTNNCAAT TTCACTTGGC CACTTCATCA GTACTTGCAG GCATCTCAAG 121 GGGAATTNGG GATCAGCACA CCCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA 181 CCAGGGGCAA GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA 241 TCTTTTCTTG AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA 301 TTGTTGTCCT CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG 361 AGGACATTCA CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG 421 TTTTGTTGGG GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA 481 ATCTAAGTTG CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA 541 TCCGGTACAC TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC 601 ATTAAAGTTG CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC TCGGAGCATT 661 GATGACCCAT GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGA Predicted gene structure (within gDNA segment 11872 to 4086): Exon 1 8552 8503 ( 50 n); cDNA 92 139 ( 48 n); score: 0.680 Intron 1 8502 5350 (3153 n); Pd: 0.156 (s: 0.68), Pa: 0.189 (s: 0.68) Exon 2 5349 4781 ( 569 n); cDNA 140 709 ( 570 n); score: 0.788 MATCH C08HBa0235H18.1- SGN-E350897- 0.779 619 0.873 C PGS_C08HBa0235H18.1-_SGN-E350897- (8552 8503,5349 4781) Alignment (genomic DNA sequence = upper lines): ACTTCAAGAG TACTTGTAGG CATCTCCAAT GGGAAATTTG TTGTTTCATT GTGAGTAGAG 8493 |||||| || |||||| ||| ||||| ||| ||| |||| | | ACTTCATCAG TACTTGCAGG CATCT-CAA- GGGGAATTNG GGATCAGCAC .......... 139 CCATAAGGAC AGAACATTAT CTTGTAGTCT GTAGTCCAAC TCTGACAAGT AAAAGTACTA 8433 .......... .......... .......... .......... .......... .......... 139 GTTGGATCGT CTTGAGGGTA ACTATAGGCA TCAGGACATC TTTGTTTGAA AAATCTTGAC 8373 .......... .......... .......... .......... .......... .......... 139 AATTCAGTAG GACCACATGG ACCGTGATTA CAACAATATT GTTGTCCTCC GAATGTTGTA 8313 .......... .......... .......... .......... .......... .......... 139 CAAGGGTTGT TACATCCTCC AGGTACCCTA AGTGAACCAG GGCATTCACC GTTTATATTG 8253 .......... .......... .......... .......... .......... .......... 139 GCTGTGCATT GAATTGGATG ACATTTTCCA GGGCCAGGCT TAGTTGGGCC AAAAGACATA 8193 .......... .......... .......... .......... .......... .......... 139 GGGATGTTGA ATCCATCAAT AACAGAAATA TCCCAAAAAT CTAGGTTACC AAACTGGTTC 8133 .......... .......... .......... .......... .......... .......... 139 AAAGCGTATT CAGCTAAGGT GTTTGGTGGT TTACCCCATC CTTTGCAATC CAGGACTCCA 8073 .......... .......... .......... .......... .......... .......... 139 CCACAATCAC CAGTCTGGCA CCAACCTCTT CCAGCACCAT CAAAGTTGCA ATTAGTACGA 8013 .......... .......... .......... .......... .......... .......... 139 CCCCAAATAC GTGCCATTTT AGTGCCAGGT GGGGCCCAAA ACCACCAACT CTGACCTCTC 7953 .......... .......... .......... .......... .......... .......... 139 TCGAGACGTC GACCACCTCC TACGGGGACC GCTGCCGCCC AAACGGTGTA GGGGCAGTTG 7893 .......... .......... .......... .......... .......... .......... 139 TTATGGACCT CAAATACACC GGAACCATAA GTGTAAGTCA CAAAGGCAAG GAGAAAAAAC 7833 .......... .......... .......... .......... .......... .......... 139 ACTAAACAAG TTGTCAAGTG ACTCATTTTA GTATAAGAAG TTGTAGGATA TATTTGCATA 7773 .......... .......... .......... .......... .......... .......... 139 TCGAGCTAGG GGTTTATATA GTGGTATGGC GGCTTTTTTT CACTATGGAC ATTAATCATA 7713 .......... .......... .......... .......... .......... .......... 139 TAAATATTGG CACTTGTTAT AAACATATAT AGAAAATTAA AAAAAAAAAT TGTATCCAAA 7653 .......... .......... .......... .......... .......... .......... 139 ATATCTCCAC TTGAAAAAAA AAGCCGCCAA TATAATATGA GTACAGCCTA TTATAAGTAA 7593 .......... .......... .......... .......... .......... .......... 139 TATATTTTGT TCACTCCAGT CATATTTCAC AGTTCAACTT TTTGCTATTT TGAAAATTTA 7533 .......... .......... .......... .......... .......... .......... 139 TGCATTAACA CATTATGATA TTTATAATGA TTAAAAAAAA AAGAGAAGAT ATTTTTTAAT 7473 .......... .......... .......... .......... .......... .......... 139 TAAGTGATAT ATACGTATTA TTAGTTTTGT GTTTAACTAT ATATTAATTT TAAATTATTT 7413 .......... .......... .......... .......... .......... .......... 139 AGTTTAGTAT ATACAACAAA TCGGAAAAAT GCATGGCAGG GCATGAAACC TAAAATTGTG 7353 .......... .......... .......... .......... .......... .......... 139 GAAAATTTCC TAATTTTTTT TGAACATTTT TTCATGAGAA ATTTAGTTAG TAGAGAATTC 7293 .......... .......... .......... .......... .......... .......... 139 TCTTCATAAT TTTTATTGGT TATGTTTTCA TAAATAAAAT AACTTAAAAA TTTTGAATTA 7233 .......... .......... .......... .......... .......... .......... 139 CAAATTTGTA ATTTTTGTTT ACAGACAATT GCCTTTTTTC CCTTGATTAT TTTTTTCCGT 7173 .......... .......... .......... .......... .......... .......... 139 CGTATATATA TAGTGGATTT TTATATTAAA TTATTTATAG CATATTTATC AAGTGGACAT 7113 .......... .......... .......... .......... .......... .......... 139 AATAATTAAT TGAAAATGTG CATGCATTCT ACAGTCAAAA AAGTTGAGCA AATGGGTAGG 7053 .......... .......... .......... .......... .......... .......... 139 CGTAGAGATG AGTGGAACCT TAAAAGTTTG AATTTTTTTT TTATTCGATA CAAGCTATGT 6993 .......... .......... .......... .......... .......... .......... 139 AGGTCTTGTT TCACACGAGA AAAATGAATT TTGAAATTAG TTATGAATTT CGTTACTAAT 6933 .......... .......... .......... .......... .......... .......... 139 CTATCTCTAA TATGCAAAGT TTTGAATAAT CTATCCCTAA TTGGTTACTA GATATAGAAC 6873 .......... .......... .......... .......... .......... .......... 139 TAGCAATGAT TTTTGTTATT GATTGAATAA TTTGTTCGAT ATTGATTTTT GTTTTATGTT 6813 .......... .......... .......... .......... .......... .......... 139 TCCTCCGTCC GATATTGTTT GTTATGGTTT CTATTTATAG ACTCAAACTA TAAAAACTTT 6753 .......... .......... .......... .......... .......... .......... 139 GACTAACATT TGAAGATACA TTTTTTTATC ATATTAATAT GAAAAGATTG TAATTTATAG 6693 .......... .......... .......... .......... .......... .......... 139 TACTTTTCAT ATTGTTTTAG AATATTTAAT TTTTTTGGTT TAAAGTATCG AATTAATGTG 6633 .......... .......... .......... .......... .......... .......... 139 ATTTAATTTA CCTTTAGAAA TCAATCAAAA TTGACTTTCG ATAAGCGTAA CATGACAAAT 6573 .......... .......... .......... .......... .......... .......... 139 ATTTCTGGAC GGAGGGAGTA TTGATTTTTT ATCGTTGTCA TCATGGTCGT CTTTGTTTGT 6513 .......... .......... .......... .......... .......... .......... 139 TGGTTCATAA TAAGATATTC TTGAGTTTAA ATGAGATGAT TGTATATTTG AGTTTAATTT 6453 .......... .......... .......... .......... .......... .......... 139 TGGAACATGC AAGAGTTTTT GGATTTGATT TTGATCGGTA GATGTACTAG TACCTGCCAC 6393 .......... .......... .......... .......... .......... .......... 139 CAAAACATCG TGAAGGATTC AGTGAACGAC TTGAAACTTA GTAACACAAG ACAATTCACT 6333 .......... .......... .......... .......... .......... .......... 139 GAATGGTTGT TGGCTCTACC GGAGGAGTCT GAAATCAACA ACGTGTAACT GCTTGGGCAG 6273 .......... .......... .......... .......... .......... .......... 139 AATAAAAGAA CTTAAATTGT TTTAATAGAA TTTTTTAAGT AACATTGCAA TTATTTAAGC 6213 .......... .......... .......... .......... .......... .......... 139 AATACGAACG CCCAATTGTA TTTTATTTTA TTTTTTTATA ATAAAAGAGT TTTGGAAGTA 6153 .......... .......... .......... .......... .......... .......... 139 ATGAATTTTA ATACAATATC AATATTTAAA TAATGTTGAA TTCTTAGCTT AGGCATTGAA 6093 .......... .......... .......... .......... .......... .......... 139 TCGCAATTGA AAGTGAAAGC CCTTTTTTGC TATTTCAAGT TATGAATTCA GATACTAAAG 6033 .......... .......... .......... .......... .......... .......... 139 GATAACGTCT TTTAGAAGGA AGATATTAAT GGGGTAAGTG ATTTTTAAAA GTTGACTTTT 5973 .......... .......... .......... .......... .......... .......... 139 ATATAAAATT ATCTTCTTCT TTTTTCTTTT TCTTTTTTGT ATATCGACTC ATTTAATTAT 5913 .......... .......... .......... .......... .......... .......... 139 CAGTTTAACT TAATGTTCGA ATCTTTAAGC TTTTTAATTA ATATTGAATT TATTATTTCT 5853 .......... .......... .......... .......... .......... .......... 139 TTAAACTTAT AAATTCAAAT CTAAACACTT ATTAAAATTT TAATGAATTT TCATATACTA 5793 .......... .......... .......... .......... .......... .......... 139 TAGTATACTT GAAAATGTTC CAAAAGCCGC CAATAAAAAA ATATTTCCAT CTGTTTGACT 5733 .......... .......... .......... .......... .......... .......... 139 TATATTATGA CATGTAACGA GTTGTCCCTA CAATTTTATA TTTTCAGATC TAGGTACTTT 5673 .......... .......... .......... .......... .......... .......... 139 AATATATTAA CTAGACTAAT TTTTTTTCAT TATAATTAAA AATTTTAAGA AAAAAACTGT 5613 .......... .......... .......... .......... .......... .......... 139 ACTCCAGATA TAATTTCAAT TTAAAATTAA AATACCATAT ATAAGACAAA GCATCGATCA 5553 .......... .......... .......... .......... .......... .......... 139 TAGATTGTTA TTCAGATCTT AGCCACTTCA AACAAACAAA TGTAAAAGAA ATGTGTACAA 5493 .......... .......... .......... .......... .......... .......... 139 GGCAAATTAA AGACAATGTC CATCTTCAAA ACAAATTTAA CAAAAAAGAG ATTGGCTCAA 5433 .......... .......... .......... .......... .......... .......... 139 CTCAAGATTT CTACTTAATT AAGCCACTTC AAGAGTATTT GTAGGAATCT CCAATGGGAA 5373 .......... .......... .......... .......... .......... .......... 139 ATTTGTTGTT TCATTGTGAG TAGAGCCATA AGGACAAAAC ATAACCTTGT AGTCTGTAGT 5313 | |||| ||||||||| | |||| | | ||| |||| | .......... .......... ...ACCCATT AGGACAAAAG ACAACCCTAT AGTTTGTACT 176 -CCAACTCTG ACAAGTAAAA GTACTTGTTG GATCGTCTTG AGGATAACTA TAGGCATCGG 5254 ||| | | |||||||| || ||||| | |||||||||| || || ||| || ||||||| ACCACCAGGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA TAAGCATCGG 236 GACATCTTTG TTTGAAAAAT CTTGACAAAT CGGTAGGACC ACATGGACCT TGAGTGCAAC 5194 ||||||||| ||||||||| | ||||| | | ||||| || |||||||||| || ||||||| GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT TGGGTGCAAC 296 AATATTGTTG TCCTCCGAAT GTAGTACAAG GGTTGTTACA TCCTCCGGGT ACCCTAAGTG 5134 |||||||||| |||||| || || ||||||| |||||||||| |||||| ||| ||| |||| | AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACCTTAAGGG 356 AACCAGGGCA TTCACCGTTT ATATTAGCAA CACATTGAAT TGGATGACAT TTTCCCGGCC 5074 | ||| || |||||| ||| ||||| || || ||||| || |||||| ||||| | CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC 416 CAGGGTTAGT TGGGCCGAAA GACATAGGGA TGTTGAATCC ATCAATAACA GAAATGTCCC 5014 ||| || || |||| | ||| | ||| || | | || ||||| ||| | | | |||||||||| TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC 476 AGAAATCTAA GTTGCTAAAT TGATTCAAAG CGTATTCAGC TAAGGTGTTT GGTGGTTTAC 4954 | |||||||| ||||||||| || | ||| | |||| || || || ||||||| || ||||| | AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC 536 CCCATCCTTT GCATTCCAAG ACTCCACCAC AATCACCGGT CTGGCACCAA CCTCTACCAG 4894 ||||||| | || | ||| |||||||||| ||||||| || ||| || | ||||| || | CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG 596 CACCATCAAA ATTGCAATTA GTACGACCCC AAATACGTGC CATTTTGGTG CCCGGTGGAG 4834 || ||| ||| |||||| | |||||||||| | |||||||| ||| || || ||| |||| CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG 656 CCCAAAACCA CCAACTTTGA CCTCTCTCGA GACGTCGGCC ACCTCCTACG GGA 4781 | | ||| |||| |||| | || ||||||| || ||| |||| ||| CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC GGA 709 hqPGS_C08HBa0235H18.1-_SGN-E350897- (5349 4781) ******************************************************************************** EST sequence 89 -strand 498 n (File: SGN-E201255-) 1 AAGTAAAAGT ACTAGTTGGA TCGTCTTGAG GGTAACTATA GGCATCAGGA CATCTTTGTT 61 TGAAAAATCT TGACAATTCA GTAGGACCAC ATGGACCGTG ATTACAACAA TATTGTTGTC 121 CTCCGAATGT TGTACAAGGG TTGTTACATC CTCCAGGTAC CCTAAGTGAA CCAGGGCATT 181 CACCGTTTAT ATTGGCTGTG CATTGAATTG GATGACATTT TCCAGGGCCA GGCTTAGTTG 241 GGCCAAAAGA CATAGGGATG TTGAATCCAT CAATAACAGA AATATCCCAA AAATCTAGGT 301 TACCAAACTG GTTCAAAGCG TATTCAGCTA AGGTGTTTGG TGGTTTACCC CATCCTTTGC 361 AATCCAGGAC TCCACCACAA TCACCAGTCT GGCACCAACC TCTTCCAGCA CCATCAAAGT 421 TGCAATTAGT ACGACCCCAA ATACGTGCCA TTTTAGTGCC AGGTGGGGCC CAAAACCACC 481 AACTCTGACC TCTCTCGA Predicted gene structure (within gDNA segment 6037 to 4078): Exon 1 5301 4804 ( 498 n); cDNA 1 498 ( 498 n); score: 0.930 MATCH C08HBa0235H18.1- SGN-E201255- 0.930 498 1.000 C PGS_C08HBa0235H18.1-_SGN-E201255- (5301 4804) Alignment (genomic DNA sequence = upper lines): AAGTAAAAGT ACTTGTTGGA TCGTCTTGAG GATAACTATA GGCATCGGGA CATCTTTGTT 5242 |||||||||| ||| |||||| |||||||||| | |||||||| |||||| ||| |||||||||| AAGTAAAAGT ACTAGTTGGA TCGTCTTGAG GGTAACTATA GGCATCAGGA CATCTTTGTT 60 TGAAAAATCT TGACAAATCG GTAGGACCAC ATGGACCTTG AGTGCAACAA TATTGTTGTC 5182 |||||||||| |||||| || |||||||||| ||||||| || | | |||||| |||||||||| TGAAAAATCT TGACAATTCA GTAGGACCAC ATGGACCGTG ATTACAACAA TATTGTTGTC 120 CTCCGAATGT AGTACAAGGG TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGGCATT 5122 |||||||||| ||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| CTCCGAATGT TGTACAAGGG TTGTTACATC CTCCAGGTAC CCTAAGTGAA CCAGGGCATT 180 CACCGTTTAT ATTAGCAACA CATTGAATTG GATGACATTT TCCCGGCCCA GGGTTAGTTG 5062 |||||||||| ||| || |||||||||| |||||||||| ||| || ||| || ||||||| CACCGTTTAT ATTGGCTGTG CATTGAATTG GATGACATTT TCCAGGGCCA GGCTTAGTTG 240 GGCCGAAAGA CATAGGGATG TTGAATCCAT CAATAACAGA AATGTCCCAG AAATCTAAGT 5002 |||| ||||| |||||||||| |||||||||| |||||||||| ||| ||||| ||||||| || GGCCAAAAGA CATAGGGATG TTGAATCCAT CAATAACAGA AATATCCCAA AAATCTAGGT 300 TGCTAAATTG ATTCAAAGCG TATTCAGCTA AGGTGTTTGG TGGTTTACCC CATCCTTTGC 4942 | | ||| || ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACCAAACTG GTTCAAAGCG TATTCAGCTA AGGTGTTTGG TGGTTTACCC CATCCTTTGC 360 ATTCCAAGAC TCCACCACAA TCACCGGTCT GGCACCAACC TCTACCAGCA CCATCAAAAT 4882 | |||| ||| |||||||||| ||||| |||| |||||||||| ||| |||||| |||||||| | AATCCAGGAC TCCACCACAA TCACCAGTCT GGCACCAACC TCTTCCAGCA CCATCAAAGT 420 TGCAATTAGT ACGACCCCAA ATACGTGCCA TTTTGGTGCC CGGTGGAGCC CAAAACCACC 4822 |||||||||| |||||||||| |||||||||| |||| ||||| ||||| ||| |||||||||| TGCAATTAGT ACGACCCCAA ATACGTGCCA TTTTAGTGCC AGGTGGGGCC CAAAACCACC 480 AACTTTGACC TCTCTCGA 4804 |||| ||||| |||||||| AACTCTGACC TCTCTCGA 498 hqPGS_C08HBa0235H18.1-_SGN-E201255- (5301 4804) ******************************************************************************** EST sequence 15 -strand 577 n (File: SGN-E211610-) 1 CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTGGATCAGC AACACCATTA GGACAAAAGA 61 CAACCTTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA TCGTCTTGTG 121 GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT GTAGGGCCAC 181 ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC 241 CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG 301 CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT 361 CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA 421 GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT 481 GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA 541 TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTG Predicted gene structure (within gDNA segment 10892 to 3826): Exon 1 5399 4815 ( 585 n); cDNA 2 577 ( 576 n); score: 0.786 MATCH C08HBa0235H18.1- SGN-E211610- 0.786 585 1.014 C PGS_C08HBa0235H18.1-_SGN-E211610- (5399 4815) Alignment (genomic DNA sequence = upper lines): AGTATTTGTA GGAATCTCCA ATGGGAAATT TGTTGTTTCA TTGTGAGTAG AGCCATAAGG 5340 |||| ||| | || ||||||| | |||||||| || | ||| | | | | |||| ||| AGTACTTGCA GGCATCTCCA AGGGGAAATT TG--G-ATCA --G-CA--AC A-CCATTAGG 52 ACAAAACATA ACCTTGTAGT CTGTAGTCCA ACTCTGACAA GTAAAAGTAC TTGTTGGATC 5280 |||||| | | ||||| |||| |||| | | || | ||| ||||| || | |||| ||||| ACAAAAGACA ACCTTATAGT TTGTACTACC ACCAGGGCAA GTAAATGTGC TTGTAGGATC 112 GTCTTGAGGA TAACTATAGG CATCGGGACA TCTTTGTTTG AAAAATCTTG ACAAATCGGT 5220 |||||| || || ||||| | |||||||||| ||||| ||| |||||| | | |||| || || GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG AAAAATTTGG ACAACTCTGT 172 AGGACCACAT GGACCTTGAG TGCAACAATA TTGTTGTCCT CCGAATGTAG TACAAGGGTT 5160 ||| |||||| |||||||| | |||||||||| |||||||||| || || || | |||||||||| AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT CCAAACGTGG TACAAGGGTT 232 GTTACATCCT CCGGGTACCC TAAGTGAACC AGGGCATTCA CCGTTTATAT TAGCAACACA 5100 |||||||||| || |||||| |||| | | ||| |||||| || ||||||| | || || GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA 292 TTGAATTGGA TGACATTTTC CCGGCCCAGG GTTAGTTGGG CCGAAAGACA TAGGGATGTT 5040 ||||||| |||||||||| | | ||| || |||||| | |||| || | || || || ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG GCAAAAGTCA TTGGAATATT 352 GAATCCATCA ATAACAGAAA TGTCCCAGAA ATCTAAGTTG CTAAATTGAT TCAAAGCGTA 4980 |||||||| | | ||||| ||||||| || |||||||||| ||||| || | ||| ||||| AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG CTAAACTGGT CCAAGGCGTA 412 TTCAGCTAAG GTGTTTGGTG GTTTACCCCA TCCTTTGCAT TCCAAGACTC CACCACAATC 4920 || |||| | |||||||| | |||| ||||| ||| | || | ||||||| |||||||||| CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC TGTAAGACTC CACCACAATC 472 ACCGGTCTGG CACCAACCTC TACCAGCACC ATCAAAATTG CAATTAGTAC GACCCCAAAT 4860 ||| ||||| || ||||| | || ||| | || ||| ||| ||| ||||| ||||||| || ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG CAACCAGTAC GACCCCATAT 532 ACGTGCCATT TTGGTGCCCG GTGGAGCCCA AAACCACCAA CTTTG 4815 ||||||||| || || ||| ||||| | ||| |||| ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT GTTTG 577 hqPGS_C08HBa0235H18.1-_SGN-E211610- (5399 4815) ******************************************************************************** EST sequence 380 -strand 736 n (File: SGN-E357015-) 1 TAAAGTACAA TATGTTATGA AAACTTAGCC ACCTCAAGAT ACAAACTAAA AGAAATGTGG 61 ATATACAAAA GNCAAGTAAT GAACAAAACT CAACCATTTN GAACAAGAAA GAGGTGGCTA 121 CACTCATGAT GAATCTACTT ATTAAGCAAC TTCAAGAGTA CTTGTAGGCA TCTCCAATGG 181 GAAATTTGTT GTTTCATTGT GAGTAGAGCC ATAAGGACAG AACATTATCT TGTAGTCTGT 241 AGTCCAACTC TGACAAGTAA AAGTACTAGT TGGATCGTCT TGAGGGTAAC TATAGGCATC 301 AGGACATCTT TGTTTGAAAA ATCTTGACAA TTCAGTAGGA CCACATGGAC CGTGATTACA 361 ACAATATTGT TGTCCTCCGA ATGTTGTACA AGGGTTGTTA CATCCTCCAG GTACCCTAAG 421 TGAACCAGGG CATTCACCGT TTATATTGGC TGTGCATTGA ATTGGATGAC ATTTTCCAGG 481 GCCAGGCTTA GTTGGGCCAA AAGACATAGG GATGTTGAAT CCATCAATAA CAGAAATATC 541 CCAAAAATCT AGGTTACCAA ACTGGTTCAA AGCGTATTCA GCTAAGGTGT TTGGTGGTTT 601 ACCCCATCCT TTGCAATCCA GGACTCCACC ACAATCACCA GTCTGGCACC AACCTCTTCC 661 AGCACCATCA AAGTTGCAAT TAGTACGACC CCAAATACGT GCCATTTTAG TGCCAGGTGG 721 GGCCCAAAAC CACCAA Predicted gene structure (within gDNA segment 7686 to 3968): Exon 1 5547 4820 ( 728 n); cDNA 13 736 ( 724 n); score: 0.880 MATCH C08HBa0235H18.1- SGN-E357015- 0.880 728 0.989 C PGS_C08HBa0235H18.1-_SGN-E357015- (5547 4820) Alignment (genomic DNA sequence = upper lines): TGTTATTCAG ATCTTAGCCA CTTCAAACAA ACAAATGTAA AAGAAATGTG TACAAGGCAA 5488 ||||| | | | |||||||| | || || | ||||| ||| |||||||||| | | || TGTTA-TGAA AACTTAGCCA CCTC-AAGAT ACAAA-CTAA AAGAAATGTG GATATACAAA 69 ATTAAAGACA ATGTCCATCT TCAAAACAAA TTTAACAAAA AAGAGATTGG CTCAACTCAA 5428 | ||| | ||| || || || | ||||| | ||||| ||| || ||||| AGNCAAG-TA ATGAACAAAA CTCAACCATT TNGAACAAGA AAGAG-GTGG CTACACTCAT 127 GAT--TTCTA CTTAATTAAG CCACTTCAAG AGTATTTGTA GGAATCTCCA ATGGGAAATT 5370 ||| |||| ||| |||||| | |||||||| |||| ||||| || ||||||| |||||||||| GATGAATCTA CTT-ATTAAG CAACTTCAAG AGTACTTGTA GGCATCTCCA ATGGGAAATT 186 TGTTGTTTCA TTGTGAGTAG AGCCATAAGG ACAAAACATA ACCTTGTAGT CTGTAGTCCA 5310 |||||||||| |||||||||| |||||||||| ||| ||||| | |||||||| |||||||||| TGTTGTTTCA TTGTGAGTAG AGCCATAAGG ACAGAACATT ATCTTGTAGT CTGTAGTCCA 246 ACTCTGACAA GTAAAAGTAC TTGTTGGATC GTCTTGAGGA TAACTATAGG CATCGGGACA 5250 |||||||||| |||||||||| | |||||||| ||||||||| |||||||||| |||| ||||| ACTCTGACAA GTAAAAGTAC TAGTTGGATC GTCTTGAGGG TAACTATAGG CATCAGGACA 306 TCTTTGTTTG AAAAATCTTG ACAAATCGGT AGGACCACAT GGACCTTGAG TGCAACAATA 5190 |||||||||| |||||||||| |||| || || |||||||||| ||||| ||| | |||||||| TCTTTGTTTG AAAAATCTTG ACAATTCAGT AGGACCACAT GGACCGTGAT TACAACAATA 366 TTGTTGTCCT CCGAATGTAG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGAACC 5130 |||||||||| |||||||| | |||||||||| |||||||||| || ||||||| |||||||||| TTGTTGTCCT CCGAATGTTG TACAAGGGTT GTTACATCCT CCAGGTACCC TAAGTGAACC 426 AGGGCATTCA CCGTTTATAT TAGCAACACA TTGAATTGGA TGACATTTTC CCGGCCCAGG 5070 |||||||||| |||||||||| | || || |||||||||| |||||||||| | || ||||| AGGGCATTCA CCGTTTATAT TGGCTGTGCA TTGAATTGGA TGACATTTTC CAGGGCCAGG 486 GTTAGTTGGG CCGAAAGACA TAGGGATGTT GAATCCATCA ATAACAGAAA TGTCCCAGAA 5010 ||||||||| || ||||||| |||||||||| |||||||||| |||||||||| | ||||| || CTTAGTTGGG CCAAAAGACA TAGGGATGTT GAATCCATCA ATAACAGAAA TATCCCAAAA 546 ATCTAAGTTG CTAAATTGAT TCAAAGCGTA TTCAGCTAAG GTGTTTGGTG GTTTACCCCA 4950 ||||| ||| | ||| || | |||||||||| |||||||||| |||||||||| |||||||||| ATCTAGGTTA CCAAACTGGT TCAAAGCGTA TTCAGCTAAG GTGTTTGGTG GTTTACCCCA 606 TCCTTTGCAT TCCAAGACTC CACCACAATC ACCGGTCTGG CACCAACCTC TACCAGCACC 4890 ||||||||| |||| ||||| |||||||||| ||| |||||| |||||||||| | |||||||| TCCTTTGCAA TCCAGGACTC CACCACAATC ACCAGTCTGG CACCAACCTC TTCCAGCACC 666 ATCAAAATTG CAATTAGTAC GACCCCAAAT ACGTGCCATT TTGGTGCCCG GTGGAGCCCA 4830 |||||| ||| |||||||||| |||||||||| |||||||||| || ||||| | |||| ||||| ATCAAAGTTG CAATTAGTAC GACCCCAAAT ACGTGCCATT TTAGTGCCAG GTGGGGCCCA 726 AAACCACCAA 4820 |||||||||| AAACCACCAA 736 hqPGS_C08HBa0235H18.1-_SGN-E357015- (5547 4820) ******************************************************************************** EST sequence 165 -strand 595 n (File: SGN-E295872-) 1 CACTCATGAT GAATCTACTT ATTAAGCAAC TTCAAGAGTA CTTGTAGGCA TCTCCAATGG 61 GAAATTTGTT GTTTCATTGT GAGTAGAGCC ATAAGGACAG AACATTATCT TGTAGTCTGT 121 AGTCCAACTC TGACAAGTAA AAGTACTAGT TGGATCGTCT TGAGGGTAAC TATAGGCATC 181 AGGACATCTT TGTTTGAAAA ATCTTGACAA TTCAGTAGGA CCACATGGAC CGTGATTACA 241 ACAATATTGT TGTCCTCCGA ATGTTGTACA AGGGTTGTTA CATCCTCCAG GTACCCTAAG 301 TGAACCAGGG CATTCACCGT TTATATTGGC TGTGCATTGA ATTGGATGAC ATTTTCCAGG 361 GCCAGGCTTA GTTGGGCCAA AAGACATAGG GATGTTGAAT CCATCAATAA CAGAAATATC 421 CCAAAAATCT AGGTTACCAA ACTGGTTCAA AGCGTATTCA GCTAAGGTGT TTGGTGGTTT 481 ACCCCATCCT TTGCAATCCA GGACTCCACC ACAATCACCA GTCTGGCACC AACCTCTTCC 541 AGCACCATCA AAGTTGCAAT TAGTACGACC CCAAATACGT GCCATTTTAG TGCCA Predicted gene structure (within gDNA segment 6486 to 4178): Exon 1 5423 4842 ( 582 n); cDNA 14 594 ( 581 n); score: 0.933 MATCH C08HBa0235H18.1- SGN-E295872- 0.933 582 0.978 C PGS_C08HBa0235H18.1-_SGN-E295872- (5423 4842) Alignment (genomic DNA sequence = upper lines): TCTACTTAAT TAAGCCACTT CAAGAGTATT TGTAGGAATC TCCAATGGGA AATTTGTTGT 5364 ||||||| || ||||| |||| |||||||| | |||||| ||| |||||||||| |||||||||| TCTACTT-AT TAAGCAACTT CAAGAGTACT TGTAGGCATC TCCAATGGGA AATTTGTTGT 72 TTCATTGTGA GTAGAGCCAT AAGGACAAAA CATAACCTTG TAGTCTGTAG TCCAACTCTG 5304 |||||||||| |||||||||| ||||||| || ||| | |||| |||||||||| |||||||||| TTCATTGTGA GTAGAGCCAT AAGGACAGAA CATTATCTTG TAGTCTGTAG TCCAACTCTG 132 ACAAGTAAAA GTACTTGTTG GATCGTCTTG AGGATAACTA TAGGCATCGG GACATCTTTG 5244 |||||||||| ||||| |||| |||||||||| ||| |||||| |||||||| | |||||||||| ACAAGTAAAA GTACTAGTTG GATCGTCTTG AGGGTAACTA TAGGCATCAG GACATCTTTG 192 TTTGAAAAAT CTTGACAAAT CGGTAGGACC ACATGGACCT TGAGTGCAAC AATATTGTTG 5184 |||||||||| |||||||| | | |||||||| ||||||||| ||| | |||| |||||||||| TTTGAAAAAT CTTGACAATT CAGTAGGACC ACATGGACCG TGATTACAAC AATATTGTTG 252 TCCTCCGAAT GTAGTACAAG GGTTGTTACA TCCTCCGGGT ACCCTAAGTG AACCAGGGCA 5124 |||||||||| || ||||||| |||||||||| |||||| ||| |||||||||| |||||||||| TCCTCCGAAT GTTGTACAAG GGTTGTTACA TCCTCCAGGT ACCCTAAGTG AACCAGGGCA 312 TTCACCGTTT ATATTAGCAA CACATTGAAT TGGATGACAT TTTCCCGGCC CAGGGTTAGT 5064 |||||||||| ||||| || |||||||| |||||||||| ||||| || | |||| ||||| TTCACCGTTT ATATTGGCTG TGCATTGAAT TGGATGACAT TTTCCAGGGC CAGGCTTAGT 372 TGGGCCGAAA GACATAGGGA TGTTGAATCC ATCAATAACA GAAATGTCCC AGAAATCTAA 5004 |||||| ||| |||||||||| |||||||||| |||||||||| ||||| |||| | ||||||| TGGGCCAAAA GACATAGGGA TGTTGAATCC ATCAATAACA GAAATATCCC AAAAATCTAG 432 GTTGCTAAAT TGATTCAAAG CGTATTCAGC TAAGGTGTTT GGTGGTTTAC CCCATCCTTT 4944 ||| | ||| || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTACCAAAC TGGTTCAAAG CGTATTCAGC TAAGGTGTTT GGTGGTTTAC CCCATCCTTT 492 GCATTCCAAG ACTCCACCAC AATCACCGGT CTGGCACCAA CCTCTACCAG CACCATCAAA 4884 ||| |||| | |||||||||| ||||||| || |||||||||| ||||| |||| |||||||||| GCAATCCAGG ACTCCACCAC AATCACCAGT CTGGCACCAA CCTCTTCCAG CACCATCAAA 552 ATTGCAATTA GTACGACCCC AAATACGTGC CATTTTGGTG CC 4842 ||||||||| |||||||||| |||||||||| |||||| ||| || GTTGCAATTA GTACGACCCC AAATACGTGC CATTTTAGTG CC 594 hqPGS_C08HBa0235H18.1-_SGN-E295872- (5423 4842) ******************************************************************************** EST sequence 299 -strand 550 n (File: SGN-E256630-) 1 ATTAGGACAA AAGACAACCC TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT 61 AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA 121 CTCTGTAGGG CCACATGGAC TTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA 181 AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC 241 CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG 301 AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA 361 GGCGTACTCG GATAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC 421 ACAATCACCA GTCTGACATG TACCTCTGCT TGCAGCATTA AAGTTGCAAC CAGTACGACC 481 CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG ACCCATGTTT GGCTTCGATT 541 GAGACGTCGC Predicted gene structure (within gDNA segment 10432 to 4236): Exon 1 5345 4845 ( 501 n); cDNA 1 501 ( 501 n); score: 0.802 MATCH C08HBa0235H18.1- SGN-E256630- 0.802 501 0.911 C PGS_C08HBa0235H18.1-_SGN-E256630- (5345 4845) Alignment (genomic DNA sequence = upper lines): ATAAGGACAA AACATAACCT TGTAGTCTGT AGTCCAACTC TGACAAGTAA AAGTACTTGT 5286 || ||||||| || | |||| | |||| ||| | | | || | ||||||| | || ||||| ATTAGGACAA AAGACAACCC TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT 60 TGGATCGTCT TGAGGATAAC TATAGGCATC GGGACATCTT TGTTTGAAAA ATCTTGACAA 5226 ||||||||| || || || | |||| ||||| |||||||||| | ||||||| || | ||||| AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA 120 ATCGGTAGGA CCACATGGAC CTTGAGTGCA ACAATATTGT TGTCCTCCGA ATGTAGTACA 5166 || ||||| |||||||||| ||| ||||| |||||||||| |||||||| | | || ||||| CTCTGTAGGG CCACATGGAC TTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA 180 AGGGTTGTTA CATCCTCCGG GTACCCTAAG TGAACCAGGG CATTCACCGT TTATATTAGC 5106 |||||||||| |||||||| | ||||| |||| | | ||| |||||||| | ||||||| || AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC 240 AACACATTGA ATTGGATGAC ATTTTCCCGG CCCAGGGTTA GTTGGGCCGA AAGACATAGG 5046 || ||| |||| |||| ||||||| | ||| || |||||| | | ||| ||| || CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG 300 GATGTTGAAT CCATCAATAA CAGAAATGTC CCAGAAATCT AAGTTGCTAA ATTGATTCAA 4986 || || ||| ||||| | | ||||||||| ||| |||||| |||||||||| | || | ||| AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA 360 AGCGTATTCA GCTAAGGTGT TTGGTGGTTT ACCCCATCCT TTGCATTCCA AGACTCCACC 4926 ||||| || | || ||||| |||| ||||| |||||||| | || | | |||||||||| GGCGTACTCG GATAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC 420 ACAATCACCG GTCTGGCACC AACCTCTACC AGCACCATCA AAATTGCAAT TAGTACGACC 4866 ||||||||| ||||| || |||||| | ||| ||| | || |||||| ||||||||| ACAATCACCA GTCTGACATG TACCTCTGCT TGCAGCATTA AAGTTGCAAC CAGTACGACC 480 CCAAATACGT GCCATTTTGG T 4845 ||| |||||| ||||| || | | CCATATACGT GCCATCTTAG T 501 hqPGS_C08HBa0235H18.1-_SGN-E256630- (5345 4845) ******************************************************************************** EST sequence 1018 +strand 773 n (File: SGN-E548946+) 1 TTTTTTTTTT CCGATATAAT TTCAATTTAA AATTAAAATA CCATATATAA GACAAAGCAT 61 CGATCATAGA TTGTTATTCA GATCTTAGCC ACTTCAAACA AACAAATGTA AAAGAAATGT 121 GTACAAGGCA AATTAAAGAC AATGTCCATC TTCAAAACAA ATTTAACAAA AAAGAGATTG 181 GCTCAACTCA AGATTTCTAC TTAATTAAGC CACTTCAAGA GTATTTGTAG GAATCTCCAA 241 TGGGAAATTT GTTGTTTCAT TGTGAGTAGA GCCATAAGGA CAAAACATAA CCTTGTAGTC 301 TGTAGTCCAA CTCTGACAAG TAAAAGTACT TGTTGGATCG TCTTGAGGAT AACTATAGGC 361 ATCGGGACAT CTTTGTTTGA AAAATCTTGA CAAATCGGTA GGACCACATG GACCTTGAGT 421 GCAACAATAT TGTTGTCCTC CGAATGTAGT ACAAGGGTTG TTACATCCTC CGGGTACCCT 481 AAGTGAACCA GGGCATTCAC CGTTTATATT AGCAACACAT TGAATTGGAT GACATTTTCC 541 CGGCCCAGGG TTAGTTGGGC CGAAAGACAT AGGGATGTTG AATCCATCAA TAACAGAAAT 601 GTCCCAGAAA TCTAAGTTGC TAAATTGATT CAAAGCGTAT TCAGCTAAGG TGTTTGGTGG 661 TTTACCCCAT CCTTTGCATT CCAAGACTCC ACCACAATCA CCGGTCTGGC ACCAACCTCT 721 ACCAGCACCA TCAAAATTGC AATTAGTACG ACCCCAAATA CGTGCCATTT TTG Predicted gene structure (within gDNA segment 6326 to 4218): Exon 1 5606 4848 ( 759 n); cDNA 13 771 ( 759 n); score: 1.000 PPA cDNA 10 1 MATCH C08HBa0235H18.1- SGN-E548946+ 1.000 759 0.982 C PGS_C08HBa0235H18.1-_SGN-E548946+ (5606 4848) Alignment (genomic DNA sequence = upper lines): GATATAATTT CAATTTAAAA TTAAAATACC ATATATAAGA CAAAGCATCG ATCATAGATT 5547 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATATAATTT CAATTTAAAA TTAAAATACC ATATATAAGA CAAAGCATCG ATCATAGATT 72 GTTATTCAGA TCTTAGCCAC TTCAAACAAA CAAATGTAAA AGAAATGTGT ACAAGGCAAA 5487 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTATTCAGA TCTTAGCCAC TTCAAACAAA CAAATGTAAA AGAAATGTGT ACAAGGCAAA 132 TTAAAGACAA TGTCCATCTT CAAAACAAAT TTAACAAAAA AGAGATTGGC TCAACTCAAG 5427 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAAAGACAA TGTCCATCTT CAAAACAAAT TTAACAAAAA AGAGATTGGC TCAACTCAAG 192 ATTTCTACTT AATTAAGCCA CTTCAAGAGT ATTTGTAGGA ATCTCCAATG GGAAATTTGT 5367 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTCTACTT AATTAAGCCA CTTCAAGAGT ATTTGTAGGA ATCTCCAATG GGAAATTTGT 252 TGTTTCATTG TGAGTAGAGC CATAAGGACA AAACATAACC TTGTAGTCTG TAGTCCAACT 5307 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTTCATTG TGAGTAGAGC CATAAGGACA AAACATAACC TTGTAGTCTG TAGTCCAACT 312 CTGACAAGTA AAAGTACTTG TTGGATCGTC TTGAGGATAA CTATAGGCAT CGGGACATCT 5247 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGACAAGTA AAAGTACTTG TTGGATCGTC TTGAGGATAA CTATAGGCAT CGGGACATCT 372 TTGTTTGAAA AATCTTGACA AATCGGTAGG ACCACATGGA CCTTGAGTGC AACAATATTG 5187 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTTTGAAA AATCTTGACA AATCGGTAGG ACCACATGGA CCTTGAGTGC AACAATATTG 432 TTGTCCTCCG AATGTAGTAC AAGGGTTGTT ACATCCTCCG GGTACCCTAA GTGAACCAGG 5127 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTCCTCCG AATGTAGTAC AAGGGTTGTT ACATCCTCCG GGTACCCTAA GTGAACCAGG 492 GCATTCACCG TTTATATTAG CAACACATTG AATTGGATGA CATTTTCCCG GCCCAGGGTT 5067 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCATTCACCG TTTATATTAG CAACACATTG AATTGGATGA CATTTTCCCG GCCCAGGGTT 552 AGTTGGGCCG AAAGACATAG GGATGTTGAA TCCATCAATA ACAGAAATGT CCCAGAAATC 5007 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTGGGCCG AAAGACATAG GGATGTTGAA TCCATCAATA ACAGAAATGT CCCAGAAATC 612 TAAGTTGCTA AATTGATTCA AAGCGTATTC AGCTAAGGTG TTTGGTGGTT TACCCCATCC 4947 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGTTGCTA AATTGATTCA AAGCGTATTC AGCTAAGGTG TTTGGTGGTT TACCCCATCC 672 TTTGCATTCC AAGACTCCAC CACAATCACC GGTCTGGCAC CAACCTCTAC CAGCACCATC 4887 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGCATTCC AAGACTCCAC CACAATCACC GGTCTGGCAC CAACCTCTAC CAGCACCATC 732 AAAATTGCAA TTAGTACGAC CCCAAATACG TGCCATTTT 4848 |||||||||| |||||||||| |||||||||| ||||||||| AAAATTGCAA TTAGTACGAC CCCAAATACG TGCCATTTT 771 hqPGS_C08HBa0235H18.1-_SGN-E548946+ (5606 4848) ******************************************************************************** EST sequence 420 -strand 658 n (File: SGN-E357685-) 1 AAATGTGGAT AATACAAAAG ACAAGTAATG AACAAAACTC AACCATTTGA CNAAGAAAGA 61 GGTGGCTACA CTCATGATGA ATCTACTTAT TAAGCAACTT CAAGAGTACT TGTAGGCATC 121 TCCAATGGGA AATTTGTTGT TTCATTGTGA GTAGAGCCAT AAGGACAGAA CATTATCTTG 181 TAGTCTGTAG TCCAACTCTG ACAAGTAAAA GTACTAGTTG GATCGTCTTG AGGGTAACTA 241 TAGGCATCAG GACATCTTTG TTTGAAAAAT CTTGACAATT CAGTAGGACC ACATGGACCG 301 TGATTACAAC AATATTGTTG TCCTCCGAAT GTTGTACAAG GGTTGTTACA TCCTCCAGGT 361 ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTGGCTG TGCATTGAAT TGGATGACAT 421 TTTCCAGGGC CAGGCTTAGT TGGGCCAAAA GACATAGGGA TGTTGAATCC ATCAATAACA 481 GAAATATCCC AAAAATCTAG GTTACCAAAC TGGTTCAAAG CGTATTCAGC TAAGGTGTTT 541 GGTGGTTTAC CCCATCCTTT GCAATCCAGG ACTCCACCAC AATCACCAGT CTGGCACCAA 601 CCTCTTCCAG CACCATCAAA GTTGCAATTA GTACGACCCC AAATACGTGC CATTTTAG Predicted gene structure (within gDNA segment 7166 to 4228): Exon 1 5423 4848 ( 576 n); cDNA 82 656 ( 575 n); score: 0.934 MATCH C08HBa0235H18.1- SGN-E357685- 0.934 576 0.875 C PGS_C08HBa0235H18.1-_SGN-E357685- (5423 4848) Alignment (genomic DNA sequence = upper lines): TCTACTTAAT TAAGCCACTT CAAGAGTATT TGTAGGAATC TCCAATGGGA AATTTGTTGT 5364 ||||||| || ||||| |||| |||||||| | |||||| ||| |||||||||| |||||||||| TCTACTT-AT TAAGCAACTT CAAGAGTACT TGTAGGCATC TCCAATGGGA AATTTGTTGT 140 TTCATTGTGA GTAGAGCCAT AAGGACAAAA CATAACCTTG TAGTCTGTAG TCCAACTCTG 5304 |||||||||| |||||||||| ||||||| || ||| | |||| |||||||||| |||||||||| TTCATTGTGA GTAGAGCCAT AAGGACAGAA CATTATCTTG TAGTCTGTAG TCCAACTCTG 200 ACAAGTAAAA GTACTTGTTG GATCGTCTTG AGGATAACTA TAGGCATCGG GACATCTTTG 5244 |||||||||| ||||| |||| |||||||||| ||| |||||| |||||||| | |||||||||| ACAAGTAAAA GTACTAGTTG GATCGTCTTG AGGGTAACTA TAGGCATCAG GACATCTTTG 260 TTTGAAAAAT CTTGACAAAT CGGTAGGACC ACATGGACCT TGAGTGCAAC AATATTGTTG 5184 |||||||||| |||||||| | | |||||||| ||||||||| ||| | |||| |||||||||| TTTGAAAAAT CTTGACAATT CAGTAGGACC ACATGGACCG TGATTACAAC AATATTGTTG 320 TCCTCCGAAT GTAGTACAAG GGTTGTTACA TCCTCCGGGT ACCCTAAGTG AACCAGGGCA 5124 |||||||||| || ||||||| |||||||||| |||||| ||| |||||||||| |||||||||| TCCTCCGAAT GTTGTACAAG GGTTGTTACA TCCTCCAGGT ACCCTAAGTG AACCAGGGCA 380 TTCACCGTTT ATATTAGCAA CACATTGAAT TGGATGACAT TTTCCCGGCC CAGGGTTAGT 5064 |||||||||| ||||| || |||||||| |||||||||| ||||| || | |||| ||||| TTCACCGTTT ATATTGGCTG TGCATTGAAT TGGATGACAT TTTCCAGGGC CAGGCTTAGT 440 TGGGCCGAAA GACATAGGGA TGTTGAATCC ATCAATAACA GAAATGTCCC AGAAATCTAA 5004 |||||| ||| |||||||||| |||||||||| |||||||||| ||||| |||| | ||||||| TGGGCCAAAA GACATAGGGA TGTTGAATCC ATCAATAACA GAAATATCCC AAAAATCTAG 500 GTTGCTAAAT TGATTCAAAG CGTATTCAGC TAAGGTGTTT GGTGGTTTAC CCCATCCTTT 4944 ||| | ||| || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTACCAAAC TGGTTCAAAG CGTATTCAGC TAAGGTGTTT GGTGGTTTAC CCCATCCTTT 560 GCATTCCAAG ACTCCACCAC AATCACCGGT CTGGCACCAA CCTCTACCAG CACCATCAAA 4884 ||| |||| | |||||||||| ||||||| || |||||||||| ||||| |||| |||||||||| GCAATCCAGG ACTCCACCAC AATCACCAGT CTGGCACCAA CCTCTTCCAG CACCATCAAA 620 ATTGCAATTA GTACGACCCC AAATACGTGC CATTTT 4848 ||||||||| |||||||||| |||||||||| |||||| GTTGCAATTA GTACGACCCC AAATACGTGC CATTTT 656 hqPGS_C08HBa0235H18.1-_SGN-E357685- (5423 4848) ******************************************************************************** EST sequence 401 -strand 669 n (File: SGN-E357464-) 1 AAGATAACAA ACTAAAGAAA ATGTGGATAT TACAAAAGAC AAGTAATGAC AAAACTCAAC 61 CCATTTTGAN CAAGAAAGAG GTGGCTACAC TCATGATGAA TCTACTTATT AAGCAACTTC 121 AAGAGTACTT GTAGGCATCT CCAATGGGAA ATTTGTTGTT TCATTGTGAG TAGAGCCATA 181 AGGACAGAAC ATTATCTTGT AGTCTGTAGT CCAACTCTGA CAAGTAAAAG TACTAGTTGG 241 ATCGTCTTGA GGGTAACTAT AGGCATCAGG ACATCTTTGT TTGAAAAATC TTGACAATTC 301 AGTAGGACCA CATGGACCGT GATTACAACA ATATTGTTGT CCTCCGAATG TTGTACAAGG 361 GTTGTTACAT CCTCCAGGTA CCCTAAGTGA ACCAGGGCAT TCACCGTTTA TATTGGCTGT 421 GCATTGAATT GGATGACATT TTCCAGGGCC AGGCTTAGTT GGGCCAAAAG ACATAGGGAT 481 GTTGAATCCA TCAATAACAG AAATATCCCA AAAATCTAGG TTACCAAACT GGTTCAAAGC 541 GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG CAATCCAGGA CTCCACCACA 601 ATCACCAGTC TGGCACCAAC CTCTTCCAGC ACCATCAAAG TTGCAATTAG TACGACCCCA 661 AATACGTGC Predicted gene structure (within gDNA segment 7356 to 4254): Exon 1 5523 4854 ( 670 n); cDNA 1 669 ( 669 n); score: 0.882 MATCH C08HBa0235H18.1- SGN-E357464- 0.882 670 1.001 C PGS_C08HBa0235H18.1-_SGN-E357464- (5523 4854) Alignment (genomic DNA sequence = upper lines): AAACAAACAA ATGTAAAAGA AATGTGTACA AGGCAAATTA AAGACAATGT CCATCTTCAA 5464 || ||||| | |||| | |||||| | | |||| | | |||| | | |||| AAGATAACAA A-CTAAAGAA AATGTGGATA TTACAAAAGA CAAGTAATGA CAAAACTCAA 59 AACAAATTTA ACAAAAAAGA GATTGGCTCA ACTCAAGAT- -TTCTACTTA ATTAAGCCAC 5406 || || | ||| ||||| | ||||| ||||| ||| ||||||| ||||||| || CCCATTTTGA NCAAGAAAGA G-GTGGCTAC ACTCATGATG AATCTACTT- ATTAAGCAAC 117 TTCAAGAGTA TTTGTAGGAA TCTCCAATGG GAAATTTGTT GTTTCATTGT GAGTAGAGCC 5346 |||||||||| ||||||| | |||||||||| |||||||||| |||||||||| |||||||||| TTCAAGAGTA CTTGTAGGCA TCTCCAATGG GAAATTTGTT GTTTCATTGT GAGTAGAGCC 177 ATAAGGACAA AACATAACCT TGTAGTCTGT AGTCCAACTC TGACAAGTAA AAGTACTTGT 5286 ||||||||| ||||| | || |||||||||| |||||||||| |||||||||| ||||||| || ATAAGGACAG AACATTATCT TGTAGTCTGT AGTCCAACTC TGACAAGTAA AAGTACTAGT 237 TGGATCGTCT TGAGGATAAC TATAGGCATC GGGACATCTT TGTTTGAAAA ATCTTGACAA 5226 |||||||||| ||||| |||| |||||||||| ||||||||| |||||||||| |||||||||| TGGATCGTCT TGAGGGTAAC TATAGGCATC AGGACATCTT TGTTTGAAAA ATCTTGACAA 297 ATCGGTAGGA CCACATGGAC CTTGAGTGCA ACAATATTGT TGTCCTCCGA ATGTAGTACA 5166 || |||||| |||||||||| | ||| | || |||||||||| |||||||||| |||| ||||| TTCAGTAGGA CCACATGGAC CGTGATTACA ACAATATTGT TGTCCTCCGA ATGTTGTACA 357 AGGGTTGTTA CATCCTCCGG GTACCCTAAG TGAACCAGGG CATTCACCGT TTATATTAGC 5106 |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| ||||||| || AGGGTTGTTA CATCCTCCAG GTACCCTAAG TGAACCAGGG CATTCACCGT TTATATTGGC 417 AACACATTGA ATTGGATGAC ATTTTCCCGG CCCAGGGTTA GTTGGGCCGA AAGACATAGG 5046 |||||| |||||||||| ||||||| || ||||| ||| |||||||| | |||||||||| TGTGCATTGA ATTGGATGAC ATTTTCCAGG GCCAGGCTTA GTTGGGCCAA AAGACATAGG 477 GATGTTGAAT CCATCAATAA CAGAAATGTC CCAGAAATCT AAGTTGCTAA ATTGATTCAA 4986 |||||||||| |||||||||| ||||||| || ||| |||||| | ||| | || | || ||||| GATGTTGAAT CCATCAATAA CAGAAATATC CCAAAAATCT AGGTTACCAA ACTGGTTCAA 537 AGCGTATTCA GCTAAGGTGT TTGGTGGTTT ACCCCATCCT TTGCATTCCA AGACTCCACC 4926 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| ||||||||| AGCGTATTCA GCTAAGGTGT TTGGTGGTTT ACCCCATCCT TTGCAATCCA GGACTCCACC 597 ACAATCACCG GTCTGGCACC AACCTCTACC AGCACCATCA AAATTGCAAT TAGTACGACC 4866 ||||||||| |||||||||| ||||||| || |||||||||| || ||||||| |||||||||| ACAATCACCA GTCTGGCACC AACCTCTTCC AGCACCATCA AAGTTGCAAT TAGTACGACC 657 CCAAATACGT GC 4854 |||||||||| || CCAAATACGT GC 669 hqPGS_C08HBa0235H18.1-_SGN-E357464- (5523 4854) ******************************************************************************** EST sequence 65 -strand 583 n (File: SGN-E351866-) 1 ACACTCATGA TGAATCTACT ATTNAAGCAC TTTCAAGAGT ACTTGTAGGC ATCTCCAATG 61 GGAAATTTGT TGTTTCATTG TGAGTAGAGC CATAAGGACA GAACATTATC TTGTAGTCTG 121 TAGTCCAACT CTGACAAGTA AAAGTACTAG TTGGATCGTC TTGAGGGTAA CTATAGGCAT 181 CAGGACATCT TTGTTTGAAA AATCTTGACA ATTCAGTAGG ACCACATGGA CCGTGATTAC 241 AACAATATTG TTGTCCTCCG AATGTTGTAC AAGGGTTGTT ACATCCTCCA GGTACCCTAA 301 GTGAACCAGG GCATTCACCG TTTATATTGG CTGTGCATTG AATTGGATGA CATTTTCCAG 361 GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA TCCATCAATA ACAGAAATAT 421 CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC AGCTAAGGTG TTTGGTGGTT 481 TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC AGTCTGGCAC CAACCTCTTC 541 CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG TGC Predicted gene structure (within gDNA segment 6496 to 4254): Exon 1 5405 4854 ( 552 n); cDNA 32 583 ( 552 n); score: 0.935 MATCH C08HBa0235H18.1- SGN-E351866- 0.935 552 0.947 C PGS_C08HBa0235H18.1-_SGN-E351866- (5405 4854) Alignment (genomic DNA sequence = upper lines): TTCAAGAGTA TTTGTAGGAA TCTCCAATGG GAAATTTGTT GTTTCATTGT GAGTAGAGCC 5346 |||||||||| ||||||| | |||||||||| |||||||||| |||||||||| |||||||||| TTCAAGAGTA CTTGTAGGCA TCTCCAATGG GAAATTTGTT GTTTCATTGT GAGTAGAGCC 91 ATAAGGACAA AACATAACCT TGTAGTCTGT AGTCCAACTC TGACAAGTAA AAGTACTTGT 5286 ||||||||| ||||| | || |||||||||| |||||||||| |||||||||| ||||||| || ATAAGGACAG AACATTATCT TGTAGTCTGT AGTCCAACTC TGACAAGTAA AAGTACTAGT 151 TGGATCGTCT TGAGGATAAC TATAGGCATC GGGACATCTT TGTTTGAAAA ATCTTGACAA 5226 |||||||||| ||||| |||| |||||||||| ||||||||| |||||||||| |||||||||| TGGATCGTCT TGAGGGTAAC TATAGGCATC AGGACATCTT TGTTTGAAAA ATCTTGACAA 211 ATCGGTAGGA CCACATGGAC CTTGAGTGCA ACAATATTGT TGTCCTCCGA ATGTAGTACA 5166 || |||||| |||||||||| | ||| | || |||||||||| |||||||||| |||| ||||| TTCAGTAGGA CCACATGGAC CGTGATTACA ACAATATTGT TGTCCTCCGA ATGTTGTACA 271 AGGGTTGTTA CATCCTCCGG GTACCCTAAG TGAACCAGGG CATTCACCGT TTATATTAGC 5106 |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| ||||||| || AGGGTTGTTA CATCCTCCAG GTACCCTAAG TGAACCAGGG CATTCACCGT TTATATTGGC 331 AACACATTGA ATTGGATGAC ATTTTCCCGG CCCAGGGTTA GTTGGGCCGA AAGACATAGG 5046 |||||| |||||||||| ||||||| || ||||| ||| |||||||| | |||||||||| TGTGCATTGA ATTGGATGAC ATTTTCCAGG GCCAGGCTTA GTTGGGCCAA AAGACATAGG 391 GATGTTGAAT CCATCAATAA CAGAAATGTC CCAGAAATCT AAGTTGCTAA ATTGATTCAA 4986 |||||||||| |||||||||| ||||||| || ||| |||||| | ||| | || | || ||||| GATGTTGAAT CCATCAATAA CAGAAATATC CCAAAAATCT AGGTTACCAA ACTGGTTCAA 451 AGCGTATTCA GCTAAGGTGT TTGGTGGTTT ACCCCATCCT TTGCATTCCA AGACTCCACC 4926 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| ||||||||| AGCGTATTCA GCTAAGGTGT TTGGTGGTTT ACCCCATCCT TTGCAATCCA GGACTCCACC 511 ACAATCACCG GTCTGGCACC AACCTCTACC AGCACCATCA AAATTGCAAT TAGTACGACC 4866 ||||||||| |||||||||| ||||||| || |||||||||| || ||||||| |||||||||| ACAATCACCA GTCTGGCACC AACCTCTTCC AGCACCATCA AAGTTGCAAT TAGTACGACC 571 CCAAATACGT GC 4854 |||||||||| || CCAAATACGT GC 583 hqPGS_C08HBa0235H18.1-_SGN-E351866- (5405 4854) ******************************************************************************** EST sequence 39 -strand 645 n (File: SGN-E350938-) 1 AAGATAACAA ACTAAAAGAA ATGTGGATAA TACAAAAGAC AAGTAATGAA CAAAACTCAA 61 CCATTTTGAA CAAGAAAGAG GTGGCTACAC TCATGATGAA TCTACTTATT AAGCAACTTC 121 AAGAGTACTT GTAGGCATCT CCAATGGGAA ATTTGTTGTT TCATTGTGAG TAGAGCCATA 181 AGGACAGAAC ATTATCTTGT AGTCTGTAGT CCAACTCTGA CAAGTAAAAG TACTAGTTGG 241 ATCGTCTTGA GGGTAACTAT AGGCATCAGG ACATCTTTGT TTGAAAAATC TTGACAATTC 301 AGTAGGACCA CATGGACCGT GATTACAACA ATATTGTTGT CCTCCGAATG TTGTACAAGG 361 GTTGTTACAT CCTCCAGGTA CCCTAAGTGA ACCAGGGCAT TCACCGTTTA TATTGGCTGT 421 GCATTGAATT GGATGACATT TTCCAGGGCC AGGCTTAGTT GGGCCAAAAG ACATAGGGAT 481 GTTGAATCCA TCAATAACAG AAATATCCCA AAAATCTAGG TTACCAAACT GGTTCAAAGC 541 GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG CAATCCAGGA CTCCACCACA 601 ATCACCAGTC TGGCACCAAC CTCTTCCAGC ACCATCAAAG TTGCA Predicted gene structure (within gDNA segment 7356 to 4089): Exon 1 5523 4878 ( 646 n); cDNA 1 645 ( 645 n); score: 0.881 MATCH C08HBa0235H18.1- SGN-E350938- 0.881 646 1.002 C PGS_C08HBa0235H18.1-_SGN-E350938- (5523 4878) Alignment (genomic DNA sequence = upper lines): AAACAAACAA ATGTAAAAGA AATGTGTACA AGGCAAATTA AAGACAATGT CCATCTTCAA 5464 || ||||| | ||||||| |||||| | | | |||| | | |||| || | AAGATAACAA A-CTAAAAGA AATGTGGATA ATACAAAAGA CAAGTAATGA ACAAAACTCA 59 AACAAATTTA ACAAAAAAGA GATTGGCTCA ACTCAAGAT- -TTCTACTTA ATTAAGCCAC 5406 | || || | |||| ||||| | ||||| ||||| ||| |||||||| |||||| || ACCATTTTGA ACAAGAAAGA G-GTGGCTAC ACTCATGATG AATCTACTTA -TTAAGCAAC 117 TTCAAGAGTA TTTGTAGGAA TCTCCAATGG GAAATTTGTT GTTTCATTGT GAGTAGAGCC 5346 |||||||||| ||||||| | |||||||||| |||||||||| |||||||||| |||||||||| TTCAAGAGTA CTTGTAGGCA TCTCCAATGG GAAATTTGTT GTTTCATTGT GAGTAGAGCC 177 ATAAGGACAA AACATAACCT TGTAGTCTGT AGTCCAACTC TGACAAGTAA AAGTACTTGT 5286 ||||||||| ||||| | || |||||||||| |||||||||| |||||||||| ||||||| || ATAAGGACAG AACATTATCT TGTAGTCTGT AGTCCAACTC TGACAAGTAA AAGTACTAGT 237 TGGATCGTCT TGAGGATAAC TATAGGCATC GGGACATCTT TGTTTGAAAA ATCTTGACAA 5226 |||||||||| ||||| |||| |||||||||| ||||||||| |||||||||| |||||||||| TGGATCGTCT TGAGGGTAAC TATAGGCATC AGGACATCTT TGTTTGAAAA ATCTTGACAA 297 ATCGGTAGGA CCACATGGAC CTTGAGTGCA ACAATATTGT TGTCCTCCGA ATGTAGTACA 5166 || |||||| |||||||||| | ||| | || |||||||||| |||||||||| |||| ||||| TTCAGTAGGA CCACATGGAC CGTGATTACA ACAATATTGT TGTCCTCCGA ATGTTGTACA 357 AGGGTTGTTA CATCCTCCGG GTACCCTAAG TGAACCAGGG CATTCACCGT TTATATTAGC 5106 |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| ||||||| || AGGGTTGTTA CATCCTCCAG GTACCCTAAG TGAACCAGGG CATTCACCGT TTATATTGGC 417 AACACATTGA ATTGGATGAC ATTTTCCCGG CCCAGGGTTA GTTGGGCCGA AAGACATAGG 5046 |||||| |||||||||| ||||||| || ||||| ||| |||||||| | |||||||||| TGTGCATTGA ATTGGATGAC ATTTTCCAGG GCCAGGCTTA GTTGGGCCAA AAGACATAGG 477 GATGTTGAAT CCATCAATAA CAGAAATGTC CCAGAAATCT AAGTTGCTAA ATTGATTCAA 4986 |||||||||| |||||||||| ||||||| || ||| |||||| | ||| | || | || ||||| GATGTTGAAT CCATCAATAA CAGAAATATC CCAAAAATCT AGGTTACCAA ACTGGTTCAA 537 AGCGTATTCA GCTAAGGTGT TTGGTGGTTT ACCCCATCCT TTGCATTCCA AGACTCCACC 4926 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| ||||||||| AGCGTATTCA GCTAAGGTGT TTGGTGGTTT ACCCCATCCT TTGCAATCCA GGACTCCACC 597 ACAATCACCG GTCTGGCACC AACCTCTACC AGCACCATCA AAATTGCA 4878 ||||||||| |||||||||| ||||||| || |||||||||| || ||||| ACAATCACCA GTCTGGCACC AACCTCTTCC AGCACCATCA AAGTTGCA 645 hqPGS_C08HBa0235H18.1-_SGN-E350938- (5523 4878) ******************************************************************************** EST sequence 660 +strand 734 n (File: SGN-E373165+) 1 CCTCGAGAGA ACTAGTCACG AGTTTTTTTT TTTTTTTTTT TCAATTTAAA ATTAAAATAC 61 CATATATAAG ACAAAGCATC GATCATAGAT TGTTATTCAA ATCTTAGCCA CTTCAAACAA 121 ACAAATGTAA AAAAAATGTG TACAAGGCAA ATTAAAGACA ATGTCCATCT TCAAAACAAA 181 TTTAACAAAA AAGAGATTGG CTCAACTCAA GATTTCTACT TAATTAAGCC ACTTCAAGAG 241 TATTTGTAGG AATCTCCAAT GGGAAATTTG TTGTTTCATT GTGAGTAGAG CCATAAGGAC 301 AAAACATAAC CTTGTAGTCT GTAGTCCAAC TCTGACAAGT AAAAGTACTT GTTGGATCGT 361 CTTGAGGATA ACTATAGGCA TCGGGACATC TTTGTTTGAA AAATCTTGAC AAATCGGTAG 421 GACCACATGG ACCTTGAGTG CAACAATATT GTTGTCCTCC GAATGTAGTA CAAGGGTTGT 481 TACATCCTCC GGGTACCCTA AGTGAACCAG GGCATTCACC GTTTATATTA GCAACACATT 541 GAATTGGATG ACATTTTCCC GGCCCAGGGT TAGTTGGGCC GAAAGACATA GGGATGTTGA 601 ATCCATCAAT AACAGAAATG TCCCAGAAAT CTAAGTTGCT AAATTGATTC AAAGCGTATT 661 CAGCTAAGGT GTTTGGTGGT TTACCCCATC CTTTGCATTC CAAGACTCCA CCACAATCAC 721 CGGTCTGGCA CCAA Predicted gene structure (within gDNA segment 6579 to 4294): Exon 1 5599 4904 ( 696 n); cDNA 39 734 ( 696 n); score: 0.997 PPA cDNA 38 22 MATCH C08HBa0235H18.1- SGN-E373165+ 0.997 696 0.948 C PGS_C08HBa0235H18.1-_SGN-E373165+ (5599 4904) Alignment (genomic DNA sequence = upper lines): TTTCAATTTA AAATTAAAAT ACCATATATA AGACAAAGCA TCGATCATAG ATTGTTATTC 5540 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCAATTTA AAATTAAAAT ACCATATATA AGACAAAGCA TCGATCATAG ATTGTTATTC 98 AGATCTTAGC CACTTCAAAC AAACAAATGT AAAAGAAATG TGTACAAGGC AAATTAAAGA 5480 | |||||||| |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| AAATCTTAGC CACTTCAAAC AAACAAATGT AAAAAAAATG TGTACAAGGC AAATTAAAGA 158 CAATGTCCAT CTTCAAAACA AATTTAACAA AAAAGAGATT GGCTCAACTC AAGATTTCTA 5420 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAATGTCCAT CTTCAAAACA AATTTAACAA AAAAGAGATT GGCTCAACTC AAGATTTCTA 218 CTTAATTAAG CCACTTCAAG AGTATTTGTA GGAATCTCCA ATGGGAAATT TGTTGTTTCA 5360 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTAATTAAG CCACTTCAAG AGTATTTGTA GGAATCTCCA ATGGGAAATT TGTTGTTTCA 278 TTGTGAGTAG AGCCATAAGG ACAAAACATA ACCTTGTAGT CTGTAGTCCA ACTCTGACAA 5300 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTGAGTAG AGCCATAAGG ACAAAACATA ACCTTGTAGT CTGTAGTCCA ACTCTGACAA 338 GTAAAAGTAC TTGTTGGATC GTCTTGAGGA TAACTATAGG CATCGGGACA TCTTTGTTTG 5240 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTAAAAGTAC TTGTTGGATC GTCTTGAGGA TAACTATAGG CATCGGGACA TCTTTGTTTG 398 AAAAATCTTG ACAAATCGGT AGGACCACAT GGACCTTGAG TGCAACAATA TTGTTGTCCT 5180 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAATCTTG ACAAATCGGT AGGACCACAT GGACCTTGAG TGCAACAATA TTGTTGTCCT 458 CCGAATGTAG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGAACC AGGGCATTCA 5120 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGAATGTAG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGAACC AGGGCATTCA 518 CCGTTTATAT TAGCAACACA TTGAATTGGA TGACATTTTC CCGGCCCAGG GTTAGTTGGG 5060 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGTTTATAT TAGCAACACA TTGAATTGGA TGACATTTTC CCGGCCCAGG GTTAGTTGGG 578 CCGAAAGACA TAGGGATGTT GAATCCATCA ATAACAGAAA TGTCCCAGAA ATCTAAGTTG 5000 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGAAAGACA TAGGGATGTT GAATCCATCA ATAACAGAAA TGTCCCAGAA ATCTAAGTTG 638 CTAAATTGAT TCAAAGCGTA TTCAGCTAAG GTGTTTGGTG GTTTACCCCA TCCTTTGCAT 4940 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAAATTGAT TCAAAGCGTA TTCAGCTAAG GTGTTTGGTG GTTTACCCCA TCCTTTGCAT 698 TCCAAGACTC CACCACAATC ACCGGTCTGG CACCAA 4904 |||||||||| |||||||||| |||||||||| |||||| TCCAAGACTC CACCACAATC ACCGGTCTGG CACCAA 734 hqPGS_C08HBa0235H18.1-_SGN-E373165+ (5599 4904) ******************************************************************************** EST sequence 151 -strand 710 n (File: SGN-E373166-) 1 TTTTTTTTTT TTTTTTTCAA TTTAAAAATT AAAATCCCAT ATATAAGACA AAGCATCGAT 61 CATAGATTGT TATTCAGATC TTAGCCACTT CAAACAAACA AATGTAAAAG AAATGTGTAC 121 AAGGCAAATT AAAGACAATG TCCATCTTCA AAACAAATTT AACAAAAAAG AGATTGGCTC 181 AACTCAAGAT TTCTACTTAA TTAAGCCACT TCAAGAGTAT TTGTAGGAAT CTCCAATGGG 241 AAATTTGTTG TTTCATTGTG AGTAGAGCCA TAAGGACAAA ACATAACCTT GTAGTCTGTA 301 GTCCAACTCT GACAAGTAAA AGTACTTGTT GGATCGTCTT GAGGATAACT ATAGGCATCG 361 GGACATCTTT GTTTGAAAAA TCTTGACAAA TCGGTAGGAC CACATGGACC TTGAGTGCAA 421 CAATATTGTT GTCCTCCGAA TGTAGTACAA GGGTTGTTAC ATCCTCCGGG TACCCTAAGT 481 GAACCAGGGC ATTCACCGTT TATATTAGCA ACACATTGAA TTGGATGACA TTTTCCCGGC 541 CCAGGGTTAG TTGGGCCGAA AGACATAGGG ATGTTGAATC CATCAATAAC AGAAATGTCC 601 CAGAAATCTA AGTTGCTAAA TTGATTCAAA GCGTATTCAG CTAAGGTGTT TGGTGGTTTA 661 CCCCATCCTT TGCATTCCAA GACTCCACCA CAATCACCGG TCTGGCACCA Predicted gene structure (within gDNA segment 6548 to 4305): Exon 1 5599 4905 ( 695 n); cDNA 15 710 ( 696 n); score: 0.995 PPA cDNA 14 1 MATCH C08HBa0235H18.1- SGN-E373166- 0.995 695 0.979 C PGS_C08HBa0235H18.1-_SGN-E373166- (5599 4905) Alignment (genomic DNA sequence = upper lines): TTTCAATTT- AAAATTAAAA TACCATATAT AAGACAAAGC ATCGATCATA GATTGTTATT 5541 ||||||||| |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| TTTCAATTTA AAAATTAAAA TCCCATATAT AAGACAAAGC ATCGATCATA GATTGTTATT 74 CAGATCTTAG CCACTTCAAA CAAACAAATG TAAAAGAAAT GTGTACAAGG CAAATTAAAG 5481 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGATCTTAG CCACTTCAAA CAAACAAATG TAAAAGAAAT GTGTACAAGG CAAATTAAAG 134 ACAATGTCCA TCTTCAAAAC AAATTTAACA AAAAAGAGAT TGGCTCAACT CAAGATTTCT 5421 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAATGTCCA TCTTCAAAAC AAATTTAACA AAAAAGAGAT TGGCTCAACT CAAGATTTCT 194 ACTTAATTAA GCCACTTCAA GAGTATTTGT AGGAATCTCC AATGGGAAAT TTGTTGTTTC 5361 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTAATTAA GCCACTTCAA GAGTATTTGT AGGAATCTCC AATGGGAAAT TTGTTGTTTC 254 ATTGTGAGTA GAGCCATAAG GACAAAACAT AACCTTGTAG TCTGTAGTCC AACTCTGACA 5301 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGTGAGTA GAGCCATAAG GACAAAACAT AACCTTGTAG TCTGTAGTCC AACTCTGACA 314 AGTAAAAGTA CTTGTTGGAT CGTCTTGAGG ATAACTATAG GCATCGGGAC ATCTTTGTTT 5241 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTAAAAGTA CTTGTTGGAT CGTCTTGAGG ATAACTATAG GCATCGGGAC ATCTTTGTTT 374 GAAAAATCTT GACAAATCGG TAGGACCACA TGGACCTTGA GTGCAACAAT ATTGTTGTCC 5181 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAAAATCTT GACAAATCGG TAGGACCACA TGGACCTTGA GTGCAACAAT ATTGTTGTCC 434 TCCGAATGTA GTACAAGGGT TGTTACATCC TCCGGGTACC CTAAGTGAAC CAGGGCATTC 5121 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCGAATGTA GTACAAGGGT TGTTACATCC TCCGGGTACC CTAAGTGAAC CAGGGCATTC 494 ACCGTTTATA TTAGCAACAC ATTGAATTGG ATGACATTTT CCCGGCCCAG GGTTAGTTGG 5061 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCGTTTATA TTAGCAACAC ATTGAATTGG ATGACATTTT CCCGGCCCAG GGTTAGTTGG 554 GCCGAAAGAC ATAGGGATGT TGAATCCATC AATAACAGAA ATGTCCCAGA AATCTAAGTT 5001 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCGAAAGAC ATAGGGATGT TGAATCCATC AATAACAGAA ATGTCCCAGA AATCTAAGTT 614 GCTAAATTGA TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA 4941 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTAAATTGA TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA 674 TTCCAAGACT CCACCACAAT CACCGGTCTG GCACCA 4905 |||||||||| |||||||||| |||||||||| |||||| TTCCAAGACT CCACCACAAT CACCGGTCTG GCACCA 710 hqPGS_C08HBa0235H18.1-_SGN-E373166- (5599 4905) ******************************************************************************** EST sequence 196 -strand 547 n (File: SGN-E291342-) 1 AAAAAAGAGA TTGGCTCAAC TCAAGATTTC TACTTAATTA AGCCACTTCA AGAGTATTTG 61 TAGGAATCTC CAATGGGAAA TTTGTTGTTT CATTGTGAGT AGAGCCATAA GGACAAAACA 121 TAACCTTGTA GTCTGTAGTC CAACTCTGAC AAGTAAAAGT ACTTGTTGGA TCGTCTTGAG 181 GATAACTATA GGCATCGGGA CATCTTTGTT TGAAAAATCT TGACAAATCG GTAGGACCAC 241 ATGGACCTTG AGTGCAACAA TATTGTTGTC CTCCGAATGT AGTACAAGGG TTGTTACATC 301 CTCCGGGTAC CCTAAGTGAA CCAGGGCATT CACCGTTTAT ATTAGCAACA CATTGAATTG 361 GATGACATTT TCCCGGCCCA GGGTTAGTTG GGCCGAAAGA CATAGGGATG TTGAATCCAT 421 CAATAACAGA AATGTCCCAG AAATCTAAGT TGCTAAATTG ATTCAAAGCG TATTCAGCTA 481 AGGTGTTTGG TGGTTTACCC CATCCTTTGC ATTCCAAGAC TCCACCACAA TCACCGGTCT 541 GGCACCA Predicted gene structure (within gDNA segment 6061 to 4305): Exon 1 5451 4905 ( 547 n); cDNA 1 547 ( 547 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E291342- 1.000 547 1.000 C PGS_C08HBa0235H18.1-_SGN-E291342- (5451 4905) Alignment (genomic DNA sequence = upper lines): AAAAAAGAGA TTGGCTCAAC TCAAGATTTC TACTTAATTA AGCCACTTCA AGAGTATTTG 5392 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAAAGAGA TTGGCTCAAC TCAAGATTTC TACTTAATTA AGCCACTTCA AGAGTATTTG 60 TAGGAATCTC CAATGGGAAA TTTGTTGTTT CATTGTGAGT AGAGCCATAA GGACAAAACA 5332 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGGAATCTC CAATGGGAAA TTTGTTGTTT CATTGTGAGT AGAGCCATAA GGACAAAACA 120 TAACCTTGTA GTCTGTAGTC CAACTCTGAC AAGTAAAAGT ACTTGTTGGA TCGTCTTGAG 5272 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAACCTTGTA GTCTGTAGTC CAACTCTGAC AAGTAAAAGT ACTTGTTGGA TCGTCTTGAG 180 GATAACTATA GGCATCGGGA CATCTTTGTT TGAAAAATCT TGACAAATCG GTAGGACCAC 5212 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAACTATA GGCATCGGGA CATCTTTGTT TGAAAAATCT TGACAAATCG GTAGGACCAC 240 ATGGACCTTG AGTGCAACAA TATTGTTGTC CTCCGAATGT AGTACAAGGG TTGTTACATC 5152 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGACCTTG AGTGCAACAA TATTGTTGTC CTCCGAATGT AGTACAAGGG TTGTTACATC 300 CTCCGGGTAC CCTAAGTGAA CCAGGGCATT CACCGTTTAT ATTAGCAACA CATTGAATTG 5092 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCCGGGTAC CCTAAGTGAA CCAGGGCATT CACCGTTTAT ATTAGCAACA CATTGAATTG 360 GATGACATTT TCCCGGCCCA GGGTTAGTTG GGCCGAAAGA CATAGGGATG TTGAATCCAT 5032 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGACATTT TCCCGGCCCA GGGTTAGTTG GGCCGAAAGA CATAGGGATG TTGAATCCAT 420 CAATAACAGA AATGTCCCAG AAATCTAAGT TGCTAAATTG ATTCAAAGCG TATTCAGCTA 4972 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAATAACAGA AATGTCCCAG AAATCTAAGT TGCTAAATTG ATTCAAAGCG TATTCAGCTA 480 AGGTGTTTGG TGGTTTACCC CATCCTTTGC ATTCCAAGAC TCCACCACAA TCACCGGTCT 4912 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGTGTTTGG TGGTTTACCC CATCCTTTGC ATTCCAAGAC TCCACCACAA TCACCGGTCT 540 GGCACCA 4905 ||||||| GGCACCA 547 hqPGS_C08HBa0235H18.1-_SGN-E291342- (5451 4905) ******************************************************************************** EST sequence 426 -strand 523 n (File: SGN-E292854-) 1 GATTTCTACT TAATTAAGCC ACTTCAAGAG TATTTGTAGG AATCTCCAAT GGGAAATTTG 61 TTGTTTCATT GTGAGTAGAG CCATAAGGAC AAAACATAAC CTTGTAGTCT GTAGTCCAAC 121 TCTGACAAGT AAAAGTACTT GTTGGATCGT CTTGAGGATA ACTATAGGCA TCGGGACATC 181 TTTGTTTGAA AAATCTTGAC AAATCGGTAG GACCACATGG ACCTTGAGTG CAACAATATT 241 GTTGTCCTCC GAATGTAGTA CAAGGGTTGT TACATCCTCC GGGTACCCTA AGTGAACCAG 301 GGCATTCACC GTTTATATTA GCAACACATT GAATTGGATG ACATTTTCCC GGCCCAGGGT 361 TAGTTGGGCC GAAAGACATA GGGATGTTGA ATCCATCAAT AACAGAAATG TCCCAGAAAT 421 CTAAGTTGCT AAATTGATTC AAAGCGTATT CAGCTAAGGT GTTTGGTGGT TTACCCCATC 481 CTTTGCATTC CAAGACTCCA CCACAATCAC CGGTCTGGCA CCA Predicted gene structure (within gDNA segment 6037 to 4305): Exon 1 5427 4905 ( 523 n); cDNA 1 523 ( 523 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E292854- 1.000 523 1.000 C PGS_C08HBa0235H18.1-_SGN-E292854- (5427 4905) Alignment (genomic DNA sequence = upper lines): GATTTCTACT TAATTAAGCC ACTTCAAGAG TATTTGTAGG AATCTCCAAT GGGAAATTTG 5368 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATTTCTACT TAATTAAGCC ACTTCAAGAG TATTTGTAGG AATCTCCAAT GGGAAATTTG 60 TTGTTTCATT GTGAGTAGAG CCATAAGGAC AAAACATAAC CTTGTAGTCT GTAGTCCAAC 5308 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTTTCATT GTGAGTAGAG CCATAAGGAC AAAACATAAC CTTGTAGTCT GTAGTCCAAC 120 TCTGACAAGT AAAAGTACTT GTTGGATCGT CTTGAGGATA ACTATAGGCA TCGGGACATC 5248 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTGACAAGT AAAAGTACTT GTTGGATCGT CTTGAGGATA ACTATAGGCA TCGGGACATC 180 TTTGTTTGAA AAATCTTGAC AAATCGGTAG GACCACATGG ACCTTGAGTG CAACAATATT 5188 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGTTTGAA AAATCTTGAC AAATCGGTAG GACCACATGG ACCTTGAGTG CAACAATATT 240 GTTGTCCTCC GAATGTAGTA CAAGGGTTGT TACATCCTCC GGGTACCCTA AGTGAACCAG 5128 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGTCCTCC GAATGTAGTA CAAGGGTTGT TACATCCTCC GGGTACCCTA AGTGAACCAG 300 GGCATTCACC GTTTATATTA GCAACACATT GAATTGGATG ACATTTTCCC GGCCCAGGGT 5068 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCATTCACC GTTTATATTA GCAACACATT GAATTGGATG ACATTTTCCC GGCCCAGGGT 360 TAGTTGGGCC GAAAGACATA GGGATGTTGA ATCCATCAAT AACAGAAATG TCCCAGAAAT 5008 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGTTGGGCC GAAAGACATA GGGATGTTGA ATCCATCAAT AACAGAAATG TCCCAGAAAT 420 CTAAGTTGCT AAATTGATTC AAAGCGTATT CAGCTAAGGT GTTTGGTGGT TTACCCCATC 4948 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAAGTTGCT AAATTGATTC AAAGCGTATT CAGCTAAGGT GTTTGGTGGT TTACCCCATC 480 CTTTGCATTC CAAGACTCCA CCACAATCAC CGGTCTGGCA CCA 4905 |||||||||| |||||||||| |||||||||| |||||||||| ||| CTTTGCATTC CAAGACTCCA CCACAATCAC CGGTCTGGCA CCA 523 hqPGS_C08HBa0235H18.1-_SGN-E292854- (5427 4905) ******************************************************************************** EST sequence 357 -strand 494 n (File: SGN-E208399-) 1 AGTATTTGTA GGAATCTCCA ATGGGAAATT TGTTGTTTCA TTGTGAGTAG AGCCATAAGG 61 ACATAACATA ACCTTGTAGT CTGTAGTCCA ACTCTGACAA GTAAAAGTAC TTGTTGGATC 121 GTCTTGAGCA TAACTATAGG CATCGGGACA TCTTTGTTTG AAAAATCTTG ACAAATCGGT 181 AGGACCACAT GGACCTTGAG TGCAACAATA TTGTTGTCCT CCGAATGTAG TACAAGGGTT 241 GTTACATCCT CCGGGTACCC TAAGTGAACC AGGGCATTCG CCGTTTATAT TAGCAACACA 301 TTGAATTGGA TGACATTTTC CCGGCCCAGG GTTAGTTGGG CCGAAAGACA TAGGGATGTT 361 GAATCCATCA ATAACAGAAA TGTCCCAGAA ATCTAAGTTG CTAAATTGAT TCAAAGCGTA 421 TTCAGTTAAG GTGTTTGGTG GTTTACCCCA TCCTTTGCAT TCCAAGACTC CACCACAATC 481 ACCGGTCTGG CACC Predicted gene structure (within gDNA segment 6009 to 4306): Exon 1 5399 4906 ( 494 n); cDNA 1 494 ( 494 n); score: 0.992 MATCH C08HBa0235H18.1- SGN-E208399- 0.992 494 1.000 C PGS_C08HBa0235H18.1-_SGN-E208399- (5399 4906) Alignment (genomic DNA sequence = upper lines): AGTATTTGTA GGAATCTCCA ATGGGAAATT TGTTGTTTCA TTGTGAGTAG AGCCATAAGG 5340 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTATTTGTA GGAATCTCCA ATGGGAAATT TGTTGTTTCA TTGTGAGTAG AGCCATAAGG 60 ACAAAACATA ACCTTGTAGT CTGTAGTCCA ACTCTGACAA GTAAAAGTAC TTGTTGGATC 5280 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATAACATA ACCTTGTAGT CTGTAGTCCA ACTCTGACAA GTAAAAGTAC TTGTTGGATC 120 GTCTTGAGGA TAACTATAGG CATCGGGACA TCTTTGTTTG AAAAATCTTG ACAAATCGGT 5220 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCTTGAGCA TAACTATAGG CATCGGGACA TCTTTGTTTG AAAAATCTTG ACAAATCGGT 180 AGGACCACAT GGACCTTGAG TGCAACAATA TTGTTGTCCT CCGAATGTAG TACAAGGGTT 5160 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGACCACAT GGACCTTGAG TGCAACAATA TTGTTGTCCT CCGAATGTAG TACAAGGGTT 240 GTTACATCCT CCGGGTACCC TAAGTGAACC AGGGCATTCA CCGTTTATAT TAGCAACACA 5100 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| GTTACATCCT CCGGGTACCC TAAGTGAACC AGGGCATTCG CCGTTTATAT TAGCAACACA 300 TTGAATTGGA TGACATTTTC CCGGCCCAGG GTTAGTTGGG CCGAAAGACA TAGGGATGTT 5040 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGAATTGGA TGACATTTTC CCGGCCCAGG GTTAGTTGGG CCGAAAGACA TAGGGATGTT 360 GAATCCATCA ATAACAGAAA TGTCCCAGAA ATCTAAGTTG CTAAATTGAT TCAAAGCGTA 4980 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAATCCATCA ATAACAGAAA TGTCCCAGAA ATCTAAGTTG CTAAATTGAT TCAAAGCGTA 420 TTCAGCTAAG GTGTTTGGTG GTTTACCCCA TCCTTTGCAT TCCAAGACTC CACCACAATC 4920 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCAGTTAAG GTGTTTGGTG GTTTACCCCA TCCTTTGCAT TCCAAGACTC CACCACAATC 480 ACCGGTCTGG CACC 4906 |||||||||| |||| ACCGGTCTGG CACC 494 hqPGS_C08HBa0235H18.1-_SGN-E208399- (5399 4906) ******************************************************************************** EST sequence 274 -strand 652 n (File: SGN-E352998-) 1 TTTTTTTTTT TTAAGACAAA TTAAAGTACA ATATGTTATT GAAATCTTAG CCACCTCAAG 61 ATAACAAACT AAAAGAAATG TGGATAATAC AAAAGACAAG TAATGAACAA AACTCAACCA 121 TTTTGAACAA GAAAGAGGTG GCTACACTCA TGATGAATCT ACTTATTAAG CAACTTCAAG 181 AGTACTTGTA GGCATCTCCA ATGGGAAATT TGTTGTTTCA TTGTGAGTAG AGCCATAAGG 241 ACAGAACATT ATCTTGTAGT CTGTAGTCCA ACTCTGACAA GTAAAAGTAC TAGTTGGATC 301 GTCTTGAGGG TAACTATAGG CATCAGGACA TCTTTGTTTG AAAAATCTTG ACAATTCAGT 361 AGGACCACAT GGACCGTGAT TACAACAATA TTGTTGTCCT CCGAATGTTG TACAAGGGTT 421 GTTACATCCT CCAGGTACCC TAAGTGAACC AGGGCATTCA CCGTTTATAT TGGCTGTGCA 481 TTGAATTGGA TGACATTTTC CAGGGCCAGG CTTAGTTGGG CCAAAAGACA TAGGGATGTT 541 GAATCCATCA ATAACAGAAA TATCCCAAAA ATCTAGGTTA CCAAACTGGT TCAAAGCGTA 601 TTCAGCTAAG GTGTTTGGTG GTTTACCCCA TCCTTTGCAA TCCAGGACTC CA Predicted gene structure (within gDNA segment 7926 to 4211): Exon 1 5571 4928 ( 644 n); cDNA 12 652 ( 641 n); score: 0.866 PPA cDNA 11 1 MATCH C08HBa0235H18.1- SGN-E352998- 0.866 644 0.988 C PGS_C08HBa0235H18.1-_SGN-E352998- (5571 4928) Alignment (genomic DNA sequence = upper lines): TAAGACAAAG CATCGATCAT AGATTGTTAT TCAGATCTTA GCCACTTCAA ACAAACAAAT 5512 ||||||||| | | || | | |||||| | | |||||| ||||| |||| |||||| TAAGACAAAT TAAAGTACA- ATA-TGTTAT TGAAATCTTA GCCACCTCAA GATAACAAA- 68 GTAAAAGAAA TGTGTACAAG GCAAATTAAA GACAATGTCC ATCTTCAAAA CAAATTTAAC 5452 ||||||||| |||| | || |||| | | |||| | | || || || ||| CTAAAAGAAA TGTGGATAAT ACAAAAGACA AGTAATGAAC AAAACTCAAC CATTTTGAAC 128 AAAAAAGAGA TTGGCTCAAC TCAAGAT--T TCTACTTAAT TAAGCCACTT CAAGAGTATT 5394 || |||||| ||||| || ||| ||| ||||||| || ||||| |||| |||||||| | AAGAAAGAG- GTGGCTACAC TCATGATGAA TCTACTT-AT TAAGCAACTT CAAGAGTACT 186 TGTAGGAATC TCCAATGGGA AATTTGTTGT TTCATTGTGA GTAGAGCCAT AAGGACAAAA 5334 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || TGTAGGCATC TCCAATGGGA AATTTGTTGT TTCATTGTGA GTAGAGCCAT AAGGACAGAA 246 CATAACCTTG TAGTCTGTAG TCCAACTCTG ACAAGTAAAA GTACTTGTTG GATCGTCTTG 5274 ||| | |||| |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| CATTATCTTG TAGTCTGTAG TCCAACTCTG ACAAGTAAAA GTACTAGTTG GATCGTCTTG 306 AGGATAACTA TAGGCATCGG GACATCTTTG TTTGAAAAAT CTTGACAAAT CGGTAGGACC 5214 ||| |||||| |||||||| | |||||||||| |||||||||| |||||||| | | |||||||| AGGGTAACTA TAGGCATCAG GACATCTTTG TTTGAAAAAT CTTGACAATT CAGTAGGACC 366 ACATGGACCT TGAGTGCAAC AATATTGTTG TCCTCCGAAT GTAGTACAAG GGTTGTTACA 5154 ||||||||| ||| | |||| |||||||||| |||||||||| || ||||||| |||||||||| ACATGGACCG TGATTACAAC AATATTGTTG TCCTCCGAAT GTTGTACAAG GGTTGTTACA 426 TCCTCCGGGT ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTAGCAA CACATTGAAT 5094 |||||| ||| |||||||||| |||||||||| |||||||||| ||||| || |||||||| TCCTCCAGGT ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTGGCTG TGCATTGAAT 486 TGGATGACAT TTTCCCGGCC CAGGGTTAGT TGGGCCGAAA GACATAGGGA TGTTGAATCC 5034 |||||||||| ||||| || | |||| ||||| |||||| ||| |||||||||| |||||||||| TGGATGACAT TTTCCAGGGC CAGGCTTAGT TGGGCCAAAA GACATAGGGA TGTTGAATCC 546 ATCAATAACA GAAATGTCCC AGAAATCTAA GTTGCTAAAT TGATTCAAAG CGTATTCAGC 4974 |||||||||| ||||| |||| | ||||||| ||| | ||| || ||||||| |||||||||| ATCAATAACA GAAATATCCC AAAAATCTAG GTTACCAAAC TGGTTCAAAG CGTATTCAGC 606 TAAGGTGTTT GGTGGTTTAC CCCATCCTTT GCATTCCAAG ACTCCA 4928 |||||||||| |||||||||| |||||||||| ||| |||| | |||||| TAAGGTGTTT GGTGGTTTAC CCCATCCTTT GCAATCCAGG ACTCCA 652 hqPGS_C08HBa0235H18.1-_SGN-E352998- (5571 4928) ******************************************************************************** EST sequence 7 -strand 591 n (File: SGN-E551414-) 1 TCAAACAAAC AAATGTAAAA GAAATGTGTA CAAGGCAAAT TAAAGACAAT GTCCATCTTC 61 AAAACAAATT TAACAAAAAA GAGATTGGCT CAACTCAAGA TTTCTACTTA ATTAAGCCAC 121 TTCAAGAGTA TTTGTAGGAA TCTCCAATGG GAAATTTGTT GTTTCATTGT GAGTAGAGCC 181 ATAAGGACAA AACATAACCT TGTAGTCTGT AGTCCAACTC TGACAAGTAA AAGTACTTGT 241 TGGATCGTCT TGAGGATAAC TATAGGCATC GGGACATCTT TGTTTGAAAA ATCTTGACAA 301 ATCGGTAGGA CCACATGGAC CTTGAGTGCA ACAATATTGT TGTCCTCCGA ATGTAGTACA 361 AGGGTTGTTA CATCCTCCGG GTACCCTAAG TGAACCAGGG CATTCACCGT TTATATTAGC 421 AACACATTGA ATTGGATGAC ATTTTCCCGG CCCAGGGTTA GTTGGGCCGA AAGACATAGG 481 GATGTTGAAT CCATCAATAA CAGAAATGTC CCAGAAATCT AAGTTGCTAA ATTGATTCAA 541 AGCGTATTCA GCTAAGGTGT TTGGTGGTTT ACCCCATCCT TTGCATTCCA A Predicted gene structure (within gDNA segment 6135 to 4335): Exon 1 5525 4935 ( 591 n); cDNA 1 591 ( 591 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E551414- 1.000 591 1.000 C PGS_C08HBa0235H18.1-_SGN-E551414- (5525 4935) Alignment (genomic DNA sequence = upper lines): TCAAACAAAC AAATGTAAAA GAAATGTGTA CAAGGCAAAT TAAAGACAAT GTCCATCTTC 5466 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAACAAAC AAATGTAAAA GAAATGTGTA CAAGGCAAAT TAAAGACAAT GTCCATCTTC 60 AAAACAAATT TAACAAAAAA GAGATTGGCT CAACTCAAGA TTTCTACTTA ATTAAGCCAC 5406 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAACAAATT TAACAAAAAA GAGATTGGCT CAACTCAAGA TTTCTACTTA ATTAAGCCAC 120 TTCAAGAGTA TTTGTAGGAA TCTCCAATGG GAAATTTGTT GTTTCATTGT GAGTAGAGCC 5346 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCAAGAGTA TTTGTAGGAA TCTCCAATGG GAAATTTGTT GTTTCATTGT GAGTAGAGCC 180 ATAAGGACAA AACATAACCT TGTAGTCTGT AGTCCAACTC TGACAAGTAA AAGTACTTGT 5286 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAAGGACAA AACATAACCT TGTAGTCTGT AGTCCAACTC TGACAAGTAA AAGTACTTGT 240 TGGATCGTCT TGAGGATAAC TATAGGCATC GGGACATCTT TGTTTGAAAA ATCTTGACAA 5226 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGATCGTCT TGAGGATAAC TATAGGCATC GGGACATCTT TGTTTGAAAA ATCTTGACAA 300 ATCGGTAGGA CCACATGGAC CTTGAGTGCA ACAATATTGT TGTCCTCCGA ATGTAGTACA 5166 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCGGTAGGA CCACATGGAC CTTGAGTGCA ACAATATTGT TGTCCTCCGA ATGTAGTACA 360 AGGGTTGTTA CATCCTCCGG GTACCCTAAG TGAACCAGGG CATTCACCGT TTATATTAGC 5106 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGTTGTTA CATCCTCCGG GTACCCTAAG TGAACCAGGG CATTCACCGT TTATATTAGC 420 AACACATTGA ATTGGATGAC ATTTTCCCGG CCCAGGGTTA GTTGGGCCGA AAGACATAGG 5046 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACACATTGA ATTGGATGAC ATTTTCCCGG CCCAGGGTTA GTTGGGCCGA AAGACATAGG 480 GATGTTGAAT CCATCAATAA CAGAAATGTC CCAGAAATCT AAGTTGCTAA ATTGATTCAA 4986 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGTTGAAT CCATCAATAA CAGAAATGTC CCAGAAATCT AAGTTGCTAA ATTGATTCAA 540 AGCGTATTCA GCTAAGGTGT TTGGTGGTTT ACCCCATCCT TTGCATTCCA A 4935 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | AGCGTATTCA GCTAAGGTGT TTGGTGGTTT ACCCCATCCT TTGCATTCCA A 591 hqPGS_C08HBa0235H18.1-_SGN-E551414- (5525 4935) ******************************************************************************** EST sequence 210 -strand 627 n (File: SGN-E206005-) 1 GCATCGATCA TAGATTGTTA TTCAGATCTT AGCCACTTCA AGCAAACAAA TGTAAAAGAA 61 ATGTGTACAA GGCAAATTAG ACACAATGTC CATCTTCAAA ACAAATTTAA CAAAACAGAG 121 ATTGGCTCAA CTCAAGATTT CTACTTAATT AAGCCACTTC AAGAGTATTT GTAGGAATCT 181 CCAATGGGAA ATTTGTTGTT TCATTGTGAG TAGAGCCATA AGGACAAAAC ATAACCTTGT 241 AGTCTGTAGT CCAACTCTGA CAAGTAAAAG TACTTGTTGG ATCGTCTTGA GGATAACTAT 301 AGGCATCGGG ACATCTTTGT TTGAAAAATC TTGACAAATC GGTAGGACCA CATGGACCTT 361 GAGTGCAACA ATATTGTTGT CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA 421 CCATAAGTGA ACCAGGGCAT TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT 481 TTCCCGGCCC AGGGTTAGTT GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG 541 AAATGTCCCA GAAATCTAAG TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG 601 GTGGTTTACC CCATCCTTTG CATTCCA Predicted gene structure (within gDNA segment 6172 to 4336): Exon 1 5562 4936 ( 627 n); cDNA 1 627 ( 627 n); score: 0.992 MATCH C08HBa0235H18.1- SGN-E206005- 0.992 627 1.000 C PGS_C08HBa0235H18.1-_SGN-E206005- (5562 4936) Alignment (genomic DNA sequence = upper lines): GCATCGATCA TAGATTGTTA TTCAGATCTT AGCCACTTCA AACAAACAAA TGTAAAAGAA 5503 |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| GCATCGATCA TAGATTGTTA TTCAGATCTT AGCCACTTCA AGCAAACAAA TGTAAAAGAA 60 ATGTGTACAA GGCAAATTAA AGACAATGTC CATCTTCAAA ACAAATTTAA CAAAAAAGAG 5443 |||||||||| ||||||||| | |||||||| |||||||||| |||||||||| ||||| |||| ATGTGTACAA GGCAAATTAG ACACAATGTC CATCTTCAAA ACAAATTTAA CAAAACAGAG 120 ATTGGCTCAA CTCAAGATTT CTACTTAATT AAGCCACTTC AAGAGTATTT GTAGGAATCT 5383 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGGCTCAA CTCAAGATTT CTACTTAATT AAGCCACTTC AAGAGTATTT GTAGGAATCT 180 CCAATGGGAA ATTTGTTGTT TCATTGTGAG TAGAGCCATA AGGACAAAAC ATAACCTTGT 5323 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAATGGGAA ATTTGTTGTT TCATTGTGAG TAGAGCCATA AGGACAAAAC ATAACCTTGT 240 AGTCTGTAGT CCAACTCTGA CAAGTAAAAG TACTTGTTGG ATCGTCTTGA GGATAACTAT 5263 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTCTGTAGT CCAACTCTGA CAAGTAAAAG TACTTGTTGG ATCGTCTTGA GGATAACTAT 300 AGGCATCGGG ACATCTTTGT TTGAAAAATC TTGACAAATC GGTAGGACCA CATGGACCTT 5203 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGCATCGGG ACATCTTTGT TTGAAAAATC TTGACAAATC GGTAGGACCA CATGGACCTT 360 GAGTGCAACA ATATTGTTGT CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA 5143 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGTGCAACA ATATTGTTGT CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA 420 CCCTAAGTGA ACCAGGGCAT TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT 5083 || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATAAGTGA ACCAGGGCAT TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT 480 TTCCCGGCCC AGGGTTAGTT GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG 5023 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCCGGCCC AGGGTTAGTT GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG 540 AAATGTCCCA GAAATCTAAG TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG 4963 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATGTCCCA GAAATCTAAG TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG 600 GTGGTTTACC CCATCCTTTG CATTCCA 4936 |||||||||| |||||||||| ||||||| GTGGTTTACC CCATCCTTTG CATTCCA 627 hqPGS_C08HBa0235H18.1-_SGN-E206005- (5562 4936) ******************************************************************************** EST sequence 269 -strand 593 n (File: SGN-E353171-) 1 TTTTTTTTTN AAGACAAATT AAAGTACAAT ATGTTATTGA AATCTTAGCC ACNTCAAGAT 61 AACAAACTAA AAGAAATGTG GATAATACAA AAGACAAGTA ATGAACAAAA CTCAACCATT 121 TTGAACAAGA AAGAGGTGGC TACACTCATG ATGAATCTAC TTATTAAGCA ACTTCAAGAG 181 TACTTGTAGG CATCTCCAAT GGGAAATTTG TTGTTTCATT GTGAGTAGAG CCATAAGGAC 241 AGAACATTAT CTTGTAGTCT GTAGTCCAAC TCTGACAAGT AAAAGTACTA GTTGGATCGT 301 CTTGAGGGTA ACTATAGGCA TCAGGACATC TTTGTTTGAA AAATCTTGAC AATTCAGTAG 361 GACCACATGG ACCGTGATTA CAACAATATT GTTGTCCTCC GAATGTTGTA CAAGGGTTGT 421 TACATCCTCC AGGTACCCTA AGTGAACCAG GGCATTCACC GTTTATATTG GCTGTGCATT 481 GAATTGGATG ACATTTTCCA GGGCCAGGCT TAGTTGGGCC AAAAGACATA GGGATGTTGA 541 ATCCATCAAT AACAGAAATA TCCCAAAAAT CTAGGTTACC AAACTGGTTC AAA Predicted gene structure (within gDNA segment 7906 to 4079): Exon 1 5570 4985 ( 586 n); cDNA 11 593 ( 583 n); score: 0.857 MATCH C08HBa0235H18.1- SGN-E353171- 0.857 586 0.988 C PGS_C08HBa0235H18.1-_SGN-E353171- (5570 4985) Alignment (genomic DNA sequence = upper lines): AAGACAAAGC ATCGATCATA GATTGTTATT CAGATCTTAG CCACTTCAAA CAAACAAATG 5511 |||||||| | | || | | ||||||| | ||||||| |||| |||| |||||| AAGACAAATT AAAGTACA-A TA-TGTTATT GAAATCTTAG CCACNTCAAG ATAACAAA-C 67 TAAAAGAAAT GTGTACAAGG CAAATTAAAG ACAATGTCCA TCTTCAAAAC AAATTTAACA 5451 |||||||||| ||| | || |||| | | |||| || || | | || |||| TAAAAGAAAT GTGGATAATA CAAAAGACAA GTAATGAACA AAACTCAACC ATTTTGAACA 127 AAAAAGAGAT TGGCTCAACT CAAGAT--TT CTACTTAATT AAGCCACTTC AAGAGTATTT 5393 | |||||| ||||| ||| || ||| | |||||| ||| |||| ||||| ||||||| || AGAAAGAG-G TGGCTACACT CATGATGAAT CTACTT-ATT AAGCAACTTC AAGAGTACTT 185 GTAGGAATCT CCAATGGGAA ATTTGTTGTT TCATTGTGAG TAGAGCCATA AGGACAAAAC 5333 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| GTAGGCATCT CCAATGGGAA ATTTGTTGTT TCATTGTGAG TAGAGCCATA AGGACAGAAC 245 ATAACCTTGT AGTCTGTAGT CCAACTCTGA CAAGTAAAAG TACTTGTTGG ATCGTCTTGA 5273 || | ||||| |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| ATTATCTTGT AGTCTGTAGT CCAACTCTGA CAAGTAAAAG TACTAGTTGG ATCGTCTTGA 305 GGATAACTAT AGGCATCGGG ACATCTTTGT TTGAAAAATC TTGACAAATC GGTAGGACCA 5213 || ||||||| ||||||| || |||||||||| |||||||||| ||||||| || ||||||||| GGGTAACTAT AGGCATCAGG ACATCTTTGT TTGAAAAATC TTGACAATTC AGTAGGACCA 365 CATGGACCTT GAGTGCAACA ATATTGTTGT CCTCCGAATG TAGTACAAGG GTTGTTACAT 5153 |||||||| | || | ||||| |||||||||| |||||||||| | |||||||| |||||||||| CATGGACCGT GATTACAACA ATATTGTTGT CCTCCGAATG TTGTACAAGG GTTGTTACAT 425 CCTCCGGGTA CCCTAAGTGA ACCAGGGCAT TCACCGTTTA TATTAGCAAC ACATTGAATT 5093 ||||| |||| |||||||||| |||||||||| |||||||||| |||| || ||||||||| CCTCCAGGTA CCCTAAGTGA ACCAGGGCAT TCACCGTTTA TATTGGCTGT GCATTGAATT 485 GGATGACATT TTCCCGGCCC AGGGTTAGTT GGGCCGAAAG ACATAGGGAT GTTGAATCCA 5033 |||||||||| |||| || || ||| |||||| ||||| |||| |||||||||| |||||||||| GGATGACATT TTCCAGGGCC AGGCTTAGTT GGGCCAAAAG ACATAGGGAT GTTGAATCCA 545 TCAATAACAG AAATGTCCCA GAAATCTAAG TTGCTAAATT GATTCAAA 4985 |||||||||| |||| ||||| ||||||| | || | ||| | | |||||| TCAATAACAG AAATATCCCA AAAATCTAGG TTACCAAACT GGTTCAAA 593 hqPGS_C08HBa0235H18.1-_SGN-E353171- (5570 4985) ******************************************************************************** EST sequence 311 -strand 582 n (File: SGN-E308347-) 1 CAAAATTAAA AGTACAATAT GTTATTGAAT TCTTAACCCC CTCAAGATAC CAAACTAAAA 61 GGAAATGTGT ATTATACAAA AGACAAGTAA TGAACAAAAC TCAACCTTTT TGAACAAGAA 121 AGAGGTGGCT ACACTCATGA TGAATCTACT TATTAAGCAC CTTCAAGAGT ACTTGTAGGC 181 ATCTCCAATG GGAAATTTGT TGTTTCATTG TGAGTAGAGC CATAAGGACA GAACATTATC 241 TTGTAGTCTG TAGTCCAACT CTGACAAGTA AAAGTACTAG TTGGATCGTC TTGAGGGTAA 301 CTATAGGCAT CAGGACATCT TTGTTTGAAA AATCTTGACA ATTCAGTAGG ACCACATGGC 361 CCGTGATTAC AACAATATTG TTGTCCTCCG AATGTTGTAC AAGGGTTGTT ACATCCTCCA 421 GGTACCCTAA GTGAACCAGG GCATTCACCG TTTATATTGG CTGTGCATTG AATTGGATGA 481 CATTTTCCAG GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA TCCATCAATC 541 CCAGAAATAT CCCAAAAATC TAGGTTACCA AACTGGTTCA AA Predicted gene structure (within gDNA segment 7796 to 3539): Exon 1 5566 4985 ( 582 n); cDNA 1 582 ( 582 n); score: 0.832 MATCH C08HBa0235H18.1- SGN-E308347- 0.832 582 1.000 C PGS_C08HBa0235H18.1-_SGN-E308347- (5566 4985) Alignment (genomic DNA sequence = upper lines): CAAAGCATCG ATCATAGATT GTTATTCAGA TCTTAGCCAC TTCAAACAAA CAAATGTAAA 5507 |||| | | | | |||||| | ||||| || | |||| | |||| ||| CAAAATTAAA AGTACAATAT GTTATTGAAT TCTTAACCCC CTCAAGATAC CAAACTAAAA 60 AGAAATGTGT ACAAGGCAAA TTAAAGACAA TGTCCATCTT CAAAACAAAT TTAACAAAAA 5447 ||||||||| | | |||| | | || || || || | | | ||||| || GGAAATGTGT ATTATACAAA AGACAAGTAA TGAACAAAAC TCAACCTTTT TGAACAAGAA 120 AGAGATTGGC TCAACTCAAG AT--TTCTAC TTAATTAAGC CACTTCAAGA GTATTTGTAG 5389 |||| |||| | ||||| | || ||||| || ||||||| |||||||| ||| |||||| AGAG-GTGGC TACACTCATG ATGAATCTAC TT-ATTAAGC ACCTTCAAGA GTACTTGTAG 178 GAATCTCCAA TGGGAAATTT GTTGTTTCAT TGTGAGTAGA GCCATAAGGA CAAAACATAA 5329 | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||| | GCATCTCCAA TGGGAAATTT GTTGTTTCAT TGTGAGTAGA GCCATAAGGA CAGAACATTA 238 CCTTGTAGTC TGTAGTCCAA CTCTGACAAG TAAAAGTACT TGTTGGATCG TCTTGAGGAT 5269 ||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||| | TCTTGTAGTC TGTAGTCCAA CTCTGACAAG TAAAAGTACT AGTTGGATCG TCTTGAGGGT 298 AACTATAGGC ATCGGGACAT CTTTGTTTGA AAAATCTTGA CAAATCGGTA GGACCACATG 5209 |||||||||| ||| |||||| |||||||||| |||||||||| ||| || ||| |||||||||| AACTATAGGC ATCAGGACAT CTTTGTTTGA AAAATCTTGA CAATTCAGTA GGACCACATG 358 GACCTTGAGT GCAACAATAT TGTTGTCCTC CGAATGTAGT ACAAGGGTTG TTACATCCTC 5149 | || ||| | ||||||||| |||||||||| ||||||| || |||||||||| |||||||||| GCCCGTGATT ACAACAATAT TGTTGTCCTC CGAATGTTGT ACAAGGGTTG TTACATCCTC 418 CGGGTACCCT AAGTGAACCA GGGCATTCAC CGTTTATATT AGCAACACAT TGAATTGGAT 5089 | |||||||| |||||||||| |||||||||| |||||||||| || ||| |||||||||| CAGGTACCCT AAGTGAACCA GGGCATTCAC CGTTTATATT GGCTGTGCAT TGAATTGGAT 478 GACATTTTCC CGGCCCAGGG TTAGTTGGGC CGAAAGACAT AGGGATGTTG AATCCATCAA 5029 |||||||||| || ||||| |||||||||| | |||||||| |||||||||| |||||||||| GACATTTTCC AGGGCCAGGC TTAGTTGGGC CAAAAGACAT AGGGATGTTG AATCCATCAA 538 TAACAGAAAT GTCCCAGAAA TCTAAGTTGC TAAATTGATT CAAA 4985 | ||||||| ||||| ||| |||| ||| | ||| || || |||| TCCCAGAAAT ATCCCAAAAA TCTAGGTTAC CAAACTGGTT CAAA 582 hqPGS_C08HBa0235H18.1-_SGN-E308347- (5566 4985) ******************************************************************************** EST sequence 133 -strand 593 n (File: SGN-E302004-) 1 TTTTTTTTTT CGATCATAGA TTGTTATTCA GATCTTAGCC ACTTCAAACA AACAAATGTA 61 AAAGAAATGT GTACAAGGCA AATTAAAGAC AATGTCCATC TTCAAAACAA ATTTAACAAA 121 AAAGAGATTG GCTCAACTCA AGATTTCTAC TTAATTAAGC CACTTCAAGA GTATTTGTAG 181 GAATCTCCAA TGGGAAATTT GTTGTTTCAT TGTGAGTAGA GCCATAAGGA CAAAACATAA 241 CCTTGTAGTC TGTAGTCCAA CTCTGACAAG TAAAAGTACT TGTTGGATCG TCTTGAGGAT 301 AACTATAGGC ATCGGGACAT CTTTGTTTGA AAAATCTTGA CAAATCGGTA GGACCACATG 361 GACCTTGAGT GCAACAATAT TGTTGTCCTC CGAATGTAGT ACAAGGGTTG TTACATCCTC 421 CGGGTACCTT AAGTGAACCA GGGCATTCAC CGTTTATATT AGCAACACAT TGAATTGGAT 481 GACATTTTCC CGGCCCAGGG TTAGTTGGGC CGAAAGACAT AGGGATGTTG AATCCATCAA 541 TAACAGAAAT GTCCCAGAAA TCTAAGTTGC TCCTCGTGCC GATTCGGCAC GAG Predicted gene structure (within gDNA segment 6259 to 4178): Exon 1 5559 5001 ( 559 n); cDNA 10 568 ( 559 n); score: 0.998 MATCH C08HBa0235H18.1- SGN-E302004- 0.998 559 0.943 C PGS_C08HBa0235H18.1-_SGN-E302004- (5559 5001) Alignment (genomic DNA sequence = upper lines): TCGATCATAG ATTGTTATTC AGATCTTAGC CACTTCAAAC AAACAAATGT AAAAGAAATG 5500 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGATCATAG ATTGTTATTC AGATCTTAGC CACTTCAAAC AAACAAATGT AAAAGAAATG 69 TGTACAAGGC AAATTAAAGA CAATGTCCAT CTTCAAAACA AATTTAACAA AAAAGAGATT 5440 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTACAAGGC AAATTAAAGA CAATGTCCAT CTTCAAAACA AATTTAACAA AAAAGAGATT 129 GGCTCAACTC AAGATTTCTA CTTAATTAAG CCACTTCAAG AGTATTTGTA GGAATCTCCA 5380 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCTCAACTC AAGATTTCTA CTTAATTAAG CCACTTCAAG AGTATTTGTA GGAATCTCCA 189 ATGGGAAATT TGTTGTTTCA TTGTGAGTAG AGCCATAAGG ACAAAACATA ACCTTGTAGT 5320 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGGAAATT TGTTGTTTCA TTGTGAGTAG AGCCATAAGG ACAAAACATA ACCTTGTAGT 249 CTGTAGTCCA ACTCTGACAA GTAAAAGTAC TTGTTGGATC GTCTTGAGGA TAACTATAGG 5260 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTAGTCCA ACTCTGACAA GTAAAAGTAC TTGTTGGATC GTCTTGAGGA TAACTATAGG 309 CATCGGGACA TCTTTGTTTG AAAAATCTTG ACAAATCGGT AGGACCACAT GGACCTTGAG 5200 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCGGGACA TCTTTGTTTG AAAAATCTTG ACAAATCGGT AGGACCACAT GGACCTTGAG 369 TGCAACAATA TTGTTGTCCT CCGAATGTAG TACAAGGGTT GTTACATCCT CCGGGTACCC 5140 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| TGCAACAATA TTGTTGTCCT CCGAATGTAG TACAAGGGTT GTTACATCCT CCGGGTACCT 429 TAAGTGAACC AGGGCATTCA CCGTTTATAT TAGCAACACA TTGAATTGGA TGACATTTTC 5080 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGTGAACC AGGGCATTCA CCGTTTATAT TAGCAACACA TTGAATTGGA TGACATTTTC 489 CCGGCCCAGG GTTAGTTGGG CCGAAAGACA TAGGGATGTT GAATCCATCA ATAACAGAAA 5020 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGGCCCAGG GTTAGTTGGG CCGAAAGACA TAGGGATGTT GAATCCATCA ATAACAGAAA 549 TGTCCCAGAA ATCTAAGTT 5001 |||||||||| ||||||||| TGTCCCAGAA ATCTAAGTT 568 hqPGS_C08HBa0235H18.1-_SGN-E302004- (5559 5001) ******************************************************************************** EST sequence 288 -strand 605 n (File: SGN-E353161-) 1 TTTTTTTTTT TAAACGATAC TCCAAATGCA CTCTTGTGTG AGAATTTTGA ACATCATGTG 61 TAAGACAAAT TAAAGTACAA TATGTTATTG AAATCTTAGC CACCTCAAGA TAACAAACTA 121 AAAGAAATGT GGATAATACA AAAGACAAGT AATGAACAAA ACTCAACCAT TTTGAACAAG 181 AAAGAGGTGG CTACACTCAT GATGAATCTA CTTATTAAGC AACTTCAAGA GTACTTGTAG 241 GCATCTCCAA TGGGAAATTT GTTGTTTCAT TGTGAGTAGA GCCATAAGGA CAGAACATTA 301 TCTTGTAGTC TGTAGTCCAA CTCTGACAAG TAAAAGTACT AGTTGGATCG TCTTGAGGGT 361 AACTATAGGC ATCAGGACAT CTTTGTTTGA AAAATCTTGA CAATTCAGTA GGACCACATG 421 GACCGTGATT ACAACAATAT TGTTGTCCTC CGAATGTTGT ACAAGGGTTG TTACATCCTC 481 CAGGTACCCT AAGTGAACCA GGGCATTCAC CGTTTATATT GGCTGTGCAT TGAATTGGAT 541 GACATTTTCC AGGGCCAGGC TTAGTTGGGC CAAAAGACAT AGGGATGTTG AATCCATCAA 601 TAACA Predicted gene structure (within gDNA segment 8416 to 4424): Exon 1 5547 5024 ( 524 n); cDNA 83 605 ( 523 n); score: 0.870 PPA cDNA 11 1 MATCH C08HBa0235H18.1- SGN-E353161- 0.870 524 0.866 C PGS_C08HBa0235H18.1-_SGN-E353161- (5547 5024) Alignment (genomic DNA sequence = upper lines): TGTTATTCAG ATCTTAGCCA CTTCAAACAA ACAAATGTAA AAGAAATGTG TACAAGGCAA 5488 ||||||| | |||||||||| | |||| | ||||| ||| |||||||||| | || ||| TGTTATTGAA ATCTTAGCCA CCTCAAGATA ACAAA-CTAA AAGAAATGTG GATAATACAA 141 ATTAAAGACA ATGTCCATCT TCAAAACAAA TTTAACAAAA AAGAGATTGG CTCAACTCAA 5428 | | | | ||| || || || || ||||| | ||||| ||| || ||||| AAGACAAGTA ATGAACAAAA CTCAACCATT TTGAACAAGA AAGAG-GTGG CTACACTCAT 200 GAT--TTCTA CTTAATTAAG CCACTTCAAG AGTATTTGTA GGAATCTCCA ATGGGAAATT 5370 ||| |||| ||| |||||| | |||||||| |||| ||||| || ||||||| |||||||||| GATGAATCTA CTT-ATTAAG CAACTTCAAG AGTACTTGTA GGCATCTCCA ATGGGAAATT 259 TGTTGTTTCA TTGTGAGTAG AGCCATAAGG ACAAAACATA ACCTTGTAGT CTGTAGTCCA 5310 |||||||||| |||||||||| |||||||||| ||| ||||| | |||||||| |||||||||| TGTTGTTTCA TTGTGAGTAG AGCCATAAGG ACAGAACATT ATCTTGTAGT CTGTAGTCCA 319 ACTCTGACAA GTAAAAGTAC TTGTTGGATC GTCTTGAGGA TAACTATAGG CATCGGGACA 5250 |||||||||| |||||||||| | |||||||| ||||||||| |||||||||| |||| ||||| ACTCTGACAA GTAAAAGTAC TAGTTGGATC GTCTTGAGGG TAACTATAGG CATCAGGACA 379 TCTTTGTTTG AAAAATCTTG ACAAATCGGT AGGACCACAT GGACCTTGAG TGCAACAATA 5190 |||||||||| |||||||||| |||| || || |||||||||| ||||| ||| | |||||||| TCTTTGTTTG AAAAATCTTG ACAATTCAGT AGGACCACAT GGACCGTGAT TACAACAATA 439 TTGTTGTCCT CCGAATGTAG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGAACC 5130 |||||||||| |||||||| | |||||||||| |||||||||| || ||||||| |||||||||| TTGTTGTCCT CCGAATGTTG TACAAGGGTT GTTACATCCT CCAGGTACCC TAAGTGAACC 499 AGGGCATTCA CCGTTTATAT TAGCAACACA TTGAATTGGA TGACATTTTC CCGGCCCAGG 5070 |||||||||| |||||||||| | || || |||||||||| |||||||||| | || ||||| AGGGCATTCA CCGTTTATAT TGGCTGTGCA TTGAATTGGA TGACATTTTC CAGGGCCAGG 559 GTTAGTTGGG CCGAAAGACA TAGGGATGTT GAATCCATCA ATAACA 5024 ||||||||| || ||||||| |||||||||| |||||||||| |||||| CTTAGTTGGG CCAAAAGACA TAGGGATGTT GAATCCATCA ATAACA 605 hqPGS_C08HBa0235H18.1-_SGN-E353161- (5547 5024) ******************************************************************************** EST sequence 340 -strand 598 n (File: SGN-E354792-) 1 TTTTTTTTTT TACTCCAAAT GCACTCTTGT GTGAGAATTT TGAACATCAT GTGTAAGACA 61 AATTAAAGTA CAATATGTTA TTGAAATCTT AGCCACCTCA AGATAACAAA CTAAAAGAAA 121 TGTGGATAAT ACAAAAGACA AGTAATGAAC AAAACTCAAC CATTTTGAAC AAGAAAGAGG 181 TGGCTACACT CATGATGAAT CTACTTATTA AGCAACTTCA AGAGTACTTG TAGGCATCTC 241 CAATGGGAAA TTTGTTGTTT CATTGTGAGT AGAGCCATAA GGACAGAACA TTATCTTGTA 301 GTCTGTAGTC CAACTCTGAC AAGTAAAAGT ACTAGTTGGA TCGTCTTGAG GGTAACTATA 361 GGCATCAGGA CATCTTTGTT TGAAAAATCT TGACAATTCA GTAGGACCAC ATGGACCGTG 421 ATTACAACAA TATTGTTGTC CTCCGAATGT TGTACAAGGG TTGTTACATC CTCCAGGTAC 481 CCTAAGTGAA CCAGGGCATT CACCGTTTAT ATTGGCTGTG CATTGAATTG GATGACATTT 541 TCCAGGGCCA GGCTTAGTTG GGCCAAAAGA CATAGGGATG TTGAATCCAT CAATAACA Predicted gene structure (within gDNA segment 8346 to 4424): Exon 1 5547 5024 ( 524 n); cDNA 76 598 ( 523 n); score: 0.870 PPA cDNA 11 1 MATCH C08HBa0235H18.1- SGN-E354792- 0.870 524 0.876 C PGS_C08HBa0235H18.1-_SGN-E354792- (5547 5024) Alignment (genomic DNA sequence = upper lines): TGTTATTCAG ATCTTAGCCA CTTCAAACAA ACAAATGTAA AAGAAATGTG TACAAGGCAA 5488 ||||||| | |||||||||| | |||| | ||||| ||| |||||||||| | || ||| TGTTATTGAA ATCTTAGCCA CCTCAAGATA ACAAA-CTAA AAGAAATGTG GATAATACAA 134 ATTAAAGACA ATGTCCATCT TCAAAACAAA TTTAACAAAA AAGAGATTGG CTCAACTCAA 5428 | | | | ||| || || || || ||||| | ||||| ||| || ||||| AAGACAAGTA ATGAACAAAA CTCAACCATT TTGAACAAGA AAGAG-GTGG CTACACTCAT 193 GAT--TTCTA CTTAATTAAG CCACTTCAAG AGTATTTGTA GGAATCTCCA ATGGGAAATT 5370 ||| |||| ||| |||||| | |||||||| |||| ||||| || ||||||| |||||||||| GATGAATCTA CTT-ATTAAG CAACTTCAAG AGTACTTGTA GGCATCTCCA ATGGGAAATT 252 TGTTGTTTCA TTGTGAGTAG AGCCATAAGG ACAAAACATA ACCTTGTAGT CTGTAGTCCA 5310 |||||||||| |||||||||| |||||||||| ||| ||||| | |||||||| |||||||||| TGTTGTTTCA TTGTGAGTAG AGCCATAAGG ACAGAACATT ATCTTGTAGT CTGTAGTCCA 312 ACTCTGACAA GTAAAAGTAC TTGTTGGATC GTCTTGAGGA TAACTATAGG CATCGGGACA 5250 |||||||||| |||||||||| | |||||||| ||||||||| |||||||||| |||| ||||| ACTCTGACAA GTAAAAGTAC TAGTTGGATC GTCTTGAGGG TAACTATAGG CATCAGGACA 372 TCTTTGTTTG AAAAATCTTG ACAAATCGGT AGGACCACAT GGACCTTGAG TGCAACAATA 5190 |||||||||| |||||||||| |||| || || |||||||||| ||||| ||| | |||||||| TCTTTGTTTG AAAAATCTTG ACAATTCAGT AGGACCACAT GGACCGTGAT TACAACAATA 432 TTGTTGTCCT CCGAATGTAG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGAACC 5130 |||||||||| |||||||| | |||||||||| |||||||||| || ||||||| |||||||||| TTGTTGTCCT CCGAATGTTG TACAAGGGTT GTTACATCCT CCAGGTACCC TAAGTGAACC 492 AGGGCATTCA CCGTTTATAT TAGCAACACA TTGAATTGGA TGACATTTTC CCGGCCCAGG 5070 |||||||||| |||||||||| | || || |||||||||| |||||||||| | || ||||| AGGGCATTCA CCGTTTATAT TGGCTGTGCA TTGAATTGGA TGACATTTTC CAGGGCCAGG 552 GTTAGTTGGG CCGAAAGACA TAGGGATGTT GAATCCATCA ATAACA 5024 ||||||||| || ||||||| |||||||||| |||||||||| |||||| CTTAGTTGGG CCAAAAGACA TAGGGATGTT GAATCCATCA ATAACA 598 hqPGS_C08HBa0235H18.1-_SGN-E354792- (5547 5024) ******************************************************************************** EST sequence 925 +strand 513 n (File: SGN-E206137+) 1 TTTTTTTGTG AGAATTTTGA ACATCATGTG TAAGACAAAT TAAAGTACAA TATGTTATTG 61 AAATCTTAGC CACCTCAAGA TAACAAACTA AAAGAAATGT GGATAATACA AAAGACAAGT 121 AATGAACAAA ACTCAACCAT TTTGAACAAG AAAGAGGTGG CTACACTCAT GATGAATCTA 181 CTTATTAAGC AACTTCAAGA GTACTTGTAG GCATCTCCAA TGGGAAATTT GTTGTTTCAT 241 TGTGAGTAGA GCCATAAGGA CAGAACATTA TCTTGTAGTC TGTAGTCCAA CTCTGACAAG 301 TAAAAGTACT AGTTGGATCG TCTTGAGGGT AACTATAGGC ATCAGGACAT CTTTGTTTGA 361 AAAATCTTGA CAATTCAGTA GGACCACATG GACCGTGATT ACAACAATAT TGTTGTCCTC 421 CGAATGTTGT ACAAGGGTTG TTACATCCTC CAGGTACCCT AAGTGAACCA GGGCATTCAC 481 CGTTTATATT GGCTGTGCAT TGAATTGGAT GAC Predicted gene structure (within gDNA segment 8106 to 4476): Exon 1 5599 5086 ( 514 n); cDNA 3 513 ( 511 n); score: 0.833 MATCH C08HBa0235H18.1- SGN-E206137+ 0.833 514 1.002 C PGS_C08HBa0235H18.1-_SGN-E206137+ (5599 5086) Alignment (genomic DNA sequence = upper lines): TTTCAATTTA AAATTAAAAT ACCATATATA AGACAAAGCA TCGATCATAG ATTGTTATTC 5540 ||| | || || || | ||| | || ||||||| | | || | | ||||||| TTTTTGTGAG AATTTTGAAC ATCATGTGTA AGACAAATTA AAGTACA-AT A-TGTTATTG 60 AGATCTTAGC CACTTCAAAC AAACAAATGT AAAAGAAATG TGTACAAGGC AAATTAAAGA 5480 | |||||||| ||| |||| |||||| | |||||||||| || | || | ||| | | AAATCTTAGC CACCTCAAGA TAACAAA-CT AAAAGAAATG TGGATAATAC AAAAGACAAG 119 CAATGTCCAT CTTCAAAACA AATTTAACAA AAAAGAGATT GGCTCAACTC AAGAT--TTC 5422 |||| || || || || ||||| |||||| | |||| |||| | ||| || TAATGAACAA AACTCAACCA TTTTGAACAA GAAAGAG-GT GGCTACACTC ATGATGAATC 178 TACTTAATTA AGCCACTTCA AGAGTATTTG TAGGAATCTC CAATGGGAAA TTTGTTGTTT 5362 ||||| |||| ||| |||||| |||||| ||| |||| ||||| |||||||||| |||||||||| TACTT-ATTA AGCAACTTCA AGAGTACTTG TAGGCATCTC CAATGGGAAA TTTGTTGTTT 237 CATTGTGAGT AGAGCCATAA GGACAAAACA TAACCTTGTA GTCTGTAGTC CAACTCTGAC 5302 |||||||||| |||||||||| ||||| |||| | | |||||| |||||||||| |||||||||| CATTGTGAGT AGAGCCATAA GGACAGAACA TTATCTTGTA GTCTGTAGTC CAACTCTGAC 297 AAGTAAAAGT ACTTGTTGGA TCGTCTTGAG GATAACTATA GGCATCGGGA CATCTTTGTT 5242 |||||||||| ||| |||||| |||||||||| | |||||||| |||||| ||| |||||||||| AAGTAAAAGT ACTAGTTGGA TCGTCTTGAG GGTAACTATA GGCATCAGGA CATCTTTGTT 357 TGAAAAATCT TGACAAATCG GTAGGACCAC ATGGACCTTG AGTGCAACAA TATTGTTGTC 5182 |||||||||| |||||| || |||||||||| ||||||| || | | |||||| |||||||||| TGAAAAATCT TGACAATTCA GTAGGACCAC ATGGACCGTG ATTACAACAA TATTGTTGTC 417 CTCCGAATGT AGTACAAGGG TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGGCATT 5122 |||||||||| ||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| CTCCGAATGT TGTACAAGGG TTGTTACATC CTCCAGGTAC CCTAAGTGAA CCAGGGCATT 477 CACCGTTTAT ATTAGCAACA CATTGAATTG GATGAC 5086 |||||||||| ||| || |||||||||| |||||| CACCGTTTAT ATTGGCTGTG CATTGAATTG GATGAC 513 hqPGS_C08HBa0235H18.1-_SGN-E206137+ (5599 5086) ******************************************************************************** EST sequence 62 -strand 537 n (File: SGN-E351855-) 1 TTTTTTTTTT TTTTTACTCC AAATGCACTC TTGTGTGAGA ATTTTGAACA TCATGTGTAA 61 GACAAATTAA AGTACAATAT GTTATTGAAA TCTTAGCCAC CTCAAGATAA CAAACTAAAA 121 GAAATGTGGA TAATACAAAA GACAAGTAAT GAACAAAACT CAACCATTTT GAACAAGAAA 181 GAGGTGGCTA CACTCATGAT GAATCTACTT ATTAAGCAAC TTCAAGAGTA CTTGTAGGCA 241 TCTCCAATGG GAAATTTGTT GTTTCATTGT GAGTAGAGCC ATAAGGACAG AACATTATCT 301 TGTAGTCTGT AGTCCAACTC TGACAAGTAA AAGTACTAGT TGGATCGTCT TGAGGGTAAC 361 TATAGGCATC AGGACATCTT TGTTTGAAAA ATCTTGACAA TTCAGTAGGA CCACATGGAC 421 CGTGATTACA ACAATATTGT TGTCCTCCGA ATGTTGTACA AGGGTTGTTA CATCCTCCAG 481 GTACCCTAAG TGAACCAGGG CATTCACCGT TTATATTGGC TGTGCATTGA ATTGGAT Predicted gene structure (within gDNA segment 8386 to 4309): Exon 1 5547 5089 ( 459 n); cDNA 80 537 ( 458 n); score: 0.861 PPA cDNA 15 1 MATCH C08HBa0235H18.1- SGN-E351855- 0.861 459 0.855 C PGS_C08HBa0235H18.1-_SGN-E351855- (5547 5089) Alignment (genomic DNA sequence = upper lines): TGTTATTCAG ATCTTAGCCA CTTCAAACAA ACAAATGTAA AAGAAATGTG TACAAGGCAA 5488 ||||||| | |||||||||| | |||| | ||||| ||| |||||||||| | || ||| TGTTATTGAA ATCTTAGCCA CCTCAAGATA ACAAA-CTAA AAGAAATGTG GATAATACAA 138 ATTAAAGACA ATGTCCATCT TCAAAACAAA TTTAACAAAA AAGAGATTGG CTCAACTCAA 5428 | | | | ||| || || || || ||||| | ||||| ||| || ||||| AAGACAAGTA ATGAACAAAA CTCAACCATT TTGAACAAGA AAGAG-GTGG CTACACTCAT 197 GAT--TTCTA CTTAATTAAG CCACTTCAAG AGTATTTGTA GGAATCTCCA ATGGGAAATT 5370 ||| |||| ||| |||||| | |||||||| |||| ||||| || ||||||| |||||||||| GATGAATCTA CTT-ATTAAG CAACTTCAAG AGTACTTGTA GGCATCTCCA ATGGGAAATT 256 TGTTGTTTCA TTGTGAGTAG AGCCATAAGG ACAAAACATA ACCTTGTAGT CTGTAGTCCA 5310 |||||||||| |||||||||| |||||||||| ||| ||||| | |||||||| |||||||||| TGTTGTTTCA TTGTGAGTAG AGCCATAAGG ACAGAACATT ATCTTGTAGT CTGTAGTCCA 316 ACTCTGACAA GTAAAAGTAC TTGTTGGATC GTCTTGAGGA TAACTATAGG CATCGGGACA 5250 |||||||||| |||||||||| | |||||||| ||||||||| |||||||||| |||| ||||| ACTCTGACAA GTAAAAGTAC TAGTTGGATC GTCTTGAGGG TAACTATAGG CATCAGGACA 376 TCTTTGTTTG AAAAATCTTG ACAAATCGGT AGGACCACAT GGACCTTGAG TGCAACAATA 5190 |||||||||| |||||||||| |||| || || |||||||||| ||||| ||| | |||||||| TCTTTGTTTG AAAAATCTTG ACAATTCAGT AGGACCACAT GGACCGTGAT TACAACAATA 436 TTGTTGTCCT CCGAATGTAG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGAACC 5130 |||||||||| |||||||| | |||||||||| |||||||||| || ||||||| |||||||||| TTGTTGTCCT CCGAATGTTG TACAAGGGTT GTTACATCCT CCAGGTACCC TAAGTGAACC 496 AGGGCATTCA CCGTTTATAT TAGCAACACA TTGAATTGGA T 5089 |||||||||| |||||||||| | || || |||||||||| | AGGGCATTCA CCGTTTATAT TGGCTGTGCA TTGAATTGGA T 537 hqPGS_C08HBa0235H18.1-_SGN-E351855- (5547 5089) ******************************************************************************** EST sequence 24 -strand 537 n (File: SGN-E351304-) 1 TTTTTTTTTT TTTTAAACGA TACTCCAAAT GCACTCTTGT GTGAGAATTT TGAACATCAT 61 GTGTAAGACA AATTAAAGTA CAATATGTTA TTGAAATCTT AGCCACCTCA AGATAACAAA 121 CTAAAAGAAA TGTGGATAAT ACAAAAGACA AGTAATGAAC AAAACTCAAC CATTTTGAAC 181 AAGAAAGAGG TGGCTACACT CATGATGAAT CTACTTATTA AGCAACTTCA AGAGTACTTG 241 TAGGCATCTC CAATGGGAAA TTTGTTGTTT CATTGTGAGT AGAGCCATAA GGACAGAACA 301 TTATCTTGTA GTCTGTAGTC CAACTCTGAC AAGTAAAAGT ACTAGTTGGA TCGTCTTGAG 361 GGTAACTATA GGCATCAGGA CATCTTTGTT TGAAAAATCT TGACAATTCA GTAGGACCAC 421 ATGGACCGTG ATTACAACAA TATTGTTGTC CTCCGAATGT TGTACAAGGG TTGTTACATC 481 CTCCAGGTAC CCTAAGTGAA CCAGGGCATT CACCGTTTAT ATTGGCTGTG CATTGAA Predicted gene structure (within gDNA segment 8446 to 4369): Exon 1 5547 5095 ( 453 n); cDNA 86 537 ( 452 n); score: 0.859 PPA cDNA 14 1 MATCH C08HBa0235H18.1- SGN-E351304- 0.859 453 0.844 C PGS_C08HBa0235H18.1-_SGN-E351304- (5547 5095) Alignment (genomic DNA sequence = upper lines): TGTTATTCAG ATCTTAGCCA CTTCAAACAA ACAAATGTAA AAGAAATGTG TACAAGGCAA 5488 ||||||| | |||||||||| | |||| | ||||| ||| |||||||||| | || ||| TGTTATTGAA ATCTTAGCCA CCTCAAGATA ACAAA-CTAA AAGAAATGTG GATAATACAA 144 ATTAAAGACA ATGTCCATCT TCAAAACAAA TTTAACAAAA AAGAGATTGG CTCAACTCAA 5428 | | | | ||| || || || || ||||| | ||||| ||| || ||||| AAGACAAGTA ATGAACAAAA CTCAACCATT TTGAACAAGA AAGAG-GTGG CTACACTCAT 203 GAT--TTCTA CTTAATTAAG CCACTTCAAG AGTATTTGTA GGAATCTCCA ATGGGAAATT 5370 ||| |||| ||| |||||| | |||||||| |||| ||||| || ||||||| |||||||||| GATGAATCTA CTT-ATTAAG CAACTTCAAG AGTACTTGTA GGCATCTCCA ATGGGAAATT 262 TGTTGTTTCA TTGTGAGTAG AGCCATAAGG ACAAAACATA ACCTTGTAGT CTGTAGTCCA 5310 |||||||||| |||||||||| |||||||||| ||| ||||| | |||||||| |||||||||| TGTTGTTTCA TTGTGAGTAG AGCCATAAGG ACAGAACATT ATCTTGTAGT CTGTAGTCCA 322 ACTCTGACAA GTAAAAGTAC TTGTTGGATC GTCTTGAGGA TAACTATAGG CATCGGGACA 5250 |||||||||| |||||||||| | |||||||| ||||||||| |||||||||| |||| ||||| ACTCTGACAA GTAAAAGTAC TAGTTGGATC GTCTTGAGGG TAACTATAGG CATCAGGACA 382 TCTTTGTTTG AAAAATCTTG ACAAATCGGT AGGACCACAT GGACCTTGAG TGCAACAATA 5190 |||||||||| |||||||||| |||| || || |||||||||| ||||| ||| | |||||||| TCTTTGTTTG AAAAATCTTG ACAATTCAGT AGGACCACAT GGACCGTGAT TACAACAATA 442 TTGTTGTCCT CCGAATGTAG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGAACC 5130 |||||||||| |||||||| | |||||||||| |||||||||| || ||||||| |||||||||| TTGTTGTCCT CCGAATGTTG TACAAGGGTT GTTACATCCT CCAGGTACCC TAAGTGAACC 502 AGGGCATTCA CCGTTTATAT TAGCAACACA TTGAA 5095 |||||||||| |||||||||| | || || ||||| AGGGCATTCA CCGTTTATAT TGGCTGTGCA TTGAA 537 hqPGS_C08HBa0235H18.1-_SGN-E351304- (5547 5095) ******************************************************************************** EST sequence 1020 +strand 399 n (File: SGN-E543859+) 1 ATATAAGACA AAGCATCGAT CATAGATTGT TATTCAGATC TTAGCCACTT CAAACAAACA 61 AATGTAAAAG AAATGTGTAC AAGGGAAATT AAAGACAATG TCCATCTTCA AAACAAATTT 121 AACAAAAAAG AGATTGGGTC AACTCAGGAT TTCTACTTAA TGAAGCCACT TCAAGAGTAT 181 TTGTAGGAAT CTCCAATGGG AAATTTGTTG GTTCATTGTG AGGAGAGCCA TAAGGACAAA 241 ACATAACCTT GTAGGCTGTA GTCCAGCTCT GACAAGTAAA AGTACTTGTT GGATCGTCTT 301 GAGGATAACT ATAGGCATCG GGACATCTTT GTTTGAAAAA TCTTGACAAA TCGGTAGGAC 361 CACATGGACC TTGAGGGGAA CAATATTGTT GTCCTCCGA Predicted gene structure (within gDNA segment 6174 to 4566): Exon 1 5574 5176 ( 399 n); cDNA 1 399 ( 399 n); score: 0.975 MATCH C08HBa0235H18.1- SGN-E543859+ 0.975 399 1.000 C PGS_C08HBa0235H18.1-_SGN-E543859+ (5574 5176) Alignment (genomic DNA sequence = upper lines): ATATAAGACA AAGCATCGAT CATAGATTGT TATTCAGATC TTAGCCACTT CAAACAAACA 5515 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATAAGACA AAGCATCGAT CATAGATTGT TATTCAGATC TTAGCCACTT CAAACAAACA 60 AATGTAAAAG AAATGTGTAC AAGGCAAATT AAAGACAATG TCCATCTTCA AAACAAATTT 5455 |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| AATGTAAAAG AAATGTGTAC AAGGGAAATT AAAGACAATG TCCATCTTCA AAACAAATTT 120 AACAAAAAAG AGATTGGCTC AACTCAAGAT TTCTACTTAA TTAAGCCACT TCAAGAGTAT 5395 |||||||||| ||||||| || |||||| ||| |||||||||| | |||||||| |||||||||| AACAAAAAAG AGATTGGGTC AACTCAGGAT TTCTACTTAA TGAAGCCACT TCAAGAGTAT 180 TTGTAGGAAT CTCCAATGGG AAATTTGTTG TTTCATTGTG AGTAGAGCCA TAAGGACAAA 5335 |||||||||| |||||||||| |||||||||| ||||||||| || ||||||| |||||||||| TTGTAGGAAT CTCCAATGGG AAATTTGTTG GTTCATTGTG AGGAGAGCCA TAAGGACAAA 240 ACATAACCTT GTAGTCTGTA GTCCAACTCT GACAAGTAAA AGTACTTGTT GGATCGTCTT 5275 |||||||||| |||| ||||| ||||| |||| |||||||||| |||||||||| |||||||||| ACATAACCTT GTAGGCTGTA GTCCAGCTCT GACAAGTAAA AGTACTTGTT GGATCGTCTT 300 GAGGATAACT ATAGGCATCG GGACATCTTT GTTTGAAAAA TCTTGACAAA TCGGTAGGAC 5215 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGGATAACT ATAGGCATCG GGACATCTTT GTTTGAAAAA TCTTGACAAA TCGGTAGGAC 360 CACATGGACC TTGAGTGCAA CAATATTGTT GTCCTCCGA 5176 |||||||||| ||||| | || |||||||||| ||||||||| CACATGGACC TTGAGGGGAA CAATATTGTT GTCCTCCGA 399 hqPGS_C08HBa0235H18.1-_SGN-E543859+ (5574 5176) ******************************************************************************** EST sequence 389 -strand 464 n (File: SGN-E310129-) 1 ACATTGAATT GGATGACATT TTCCCGGCNC AGGGTTAGTT GGGCCGAAAG ACATAGGGAT 61 GTTGAATCCA TCAATAACAG AAATGTCCCA GAAATCTAAG TTGCTAAATT GATTCAAAGC 121 GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG CATTCCAAGA CTCCACCACA 181 ATCACCGGTC TGGCACCAAC CTCTACCAGC ACCATCAAAA TTGCAATTAG TACGACCCCA 241 AATACGTGCC ATTTTGGTGC CCGGTGGAGC CCAAAACCAC CAACTTTGAC CTCTCTCGAG 301 ACGTCGGCCA CCTCCTACGG GAGTCGCCGC TGCCCATACG GTGTATGGAC AGTTGTTATG 361 GACCTCAAAT ACACCGGAAG CATAAGTGTA AGTCACAAAG GCAAGGAGAA AGAACACTAA 421 ACAAGTTGTC AAATGACTCA TTTTAGAATA AAAGAAGAAT ATTT Predicted gene structure (within gDNA segment 9271 to 6896): Exon 1 8246 7784 ( 463 n); cDNA 2 462 ( 461 n); score: 0.914 MATCH C08HBa0235H18.1- SGN-E310129- 0.914 463 0.998 C PGS_C08HBa0235H18.1-_SGN-E310129- (8246 7784) Alignment (genomic DNA sequence = upper lines): CATTGAATTG GATGACATTT TCCAGGGCCA GGCTTAGTTG GGCCAAAAGA CATAGGGATG 8187 |||||||||| |||||||||| ||| || || || ||||||| |||| ||||| |||||||||| CATTGAATTG GATGACATTT TCCCGGCNCA GGGTTAGTTG GGCCGAAAGA CATAGGGATG 61 TTGAATCCAT CAATAACAGA AATATCCCAA AAATCTAGGT TACCAAACTG GTTCAAAGCG 8127 |||||||||| |||||||||| ||| ||||| ||||||| || | | ||| || ||||||||| TTGAATCCAT CAATAACAGA AATGTCCCAG AAATCTAAGT TGCTAAATTG ATTCAAAGCG 121 TATTCAGCTA AGGTGTTTGG TGGTTTACCC CATCCTTTGC AATCCAGGAC TCCACCACAA 8067 |||||||||| |||||||||| |||||||||| |||||||||| | |||| ||| |||||||||| TATTCAGCTA AGGTGTTTGG TGGTTTACCC CATCCTTTGC ATTCCAAGAC TCCACCACAA 181 TCACCAGTCT GGCACCAACC TCTTCCAGCA CCATCAAAGT TGCAATTAGT ACGACCCCAA 8007 ||||| |||| |||||||||| ||| |||||| |||||||| | |||||||||| |||||||||| TCACCGGTCT GGCACCAACC TCTACCAGCA CCATCAAAAT TGCAATTAGT ACGACCCCAA 241 ATACGTGCCA TTTTAGTGCC AGGTGGGGCC CAAAACCACC AACTCTGACC TCTCTCGAGA 7947 |||||||||| |||| ||||| ||||| ||| |||||||||| |||| ||||| |||||||||| ATACGTGCCA TTTTGGTGCC CGGTGGAGCC CAAAACCACC AACTTTGACC TCTCTCGAGA 301 CGTCGACCAC CTCCTACGGG GACCGCTGCC GCCCAAACGG TGTAGGGGCA GTTGTTATGG 7887 ||||| |||| |||||||||| ||| || ||||| |||| |||| || || |||||||||| CGTCGGCCAC CTCCTACGGG AGTCGCCGCT GCCCATACGG TGTATGGACA GTTGTTATGG 361 ACCTCAAATA CACCGGAACC ATAAGTGTAA GTCACAAAGG CAAGGAGAAA AAACACTAAA 7827 |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| ||||||||| ACCTCAAATA CACCGGAAGC ATAAGTGTAA GTCACAAAGG CAAGGAGAAA GAACACTAAA 421 CAAGTTGTCA AGTGACTCAT TTTAGTATAA GAAGTTGTAG GAT 7784 |||||||||| | |||||||| ||||| |||| ||| | | || CAAGTTGTCA AATGACTCAT TTTAGAATAA -AAGAAG-AA TAT 462 hqPGS_C08HBa0235H18.1-_SGN-E310129- (8246 7784) ******************************************************************************** EST sequence 81 -strand 655 n (File: SGN-E305774-) 1 GACAAGTAAA AGTACTTGTT GGATCGTCTT GAGGATAACT ATAGGCATCG GGACATCTTT 61 GTTTGAAAAA TCTTGACAAA TCGGTAGGAC CACATGGACC TTGAGTGCAA CAATATTGTT 121 GTCCTCCGAA TGTAGTACAA GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GAACCAGGGC 181 ATTCACCGTT TATATTAGCA ACACATTGAA TTGGATGACA TTTTCCCGGC CCAGGGTTAG 241 TTGGGCCGAA AGACATAGGG ATGTTGAATC CATCAATAAC AGAAATGTCC CAGAAATCTA 301 AGTTGCTAAA TTGATTCAAA GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT 361 TGCATTCCAA GACTCCACCA CAATCACCGG TCTGGCACCA ACCTCTACCA GCACCATCAA 421 AATTGCAATT AGTACGACCC CAAATACGTG CCATTTTGGT GCCCGGTGGA GCCCAAAACC 481 ACCAACTTTG ACCTCTCTCG AGACGTCGGC CACCTCCTAC GGGAGTCGCC GCTGCCCATA 541 CGGTGTATGG ACAGTTGTTA TGGACCTCAA ATACACCGGA AGCATAAGTG TAAGTCACAA 601 AGGCAAGGAG AAACAACACT AAACAAGTTG TCAAATGACT CATTATAGAA TAAAA Predicted gene structure (within gDNA segment 9059 to 7006): Exon 1 8449 7797 ( 653 n); cDNA 1 653 ( 653 n); score: 0.925 MATCH C08HBa0235H18.1- SGN-E305774- 0.925 653 0.997 C PGS_C08HBa0235H18.1-_SGN-E305774- (8449 7797) Alignment (genomic DNA sequence = upper lines): GACAAGTAAA AGTACTAGTT GGATCGTCTT GAGGGTAACT ATAGGCATCA GGACATCTTT 8390 |||||||||| |||||| ||| |||||||||| |||| ||||| ||||||||| |||||||||| GACAAGTAAA AGTACTTGTT GGATCGTCTT GAGGATAACT ATAGGCATCG GGACATCTTT 60 GTTTGAAAAA TCTTGACAAT TCAGTAGGAC CACATGGACC GTGATTACAA CAATATTGTT 8330 |||||||||| ||||||||| || ||||||| |||||||||| ||| | ||| |||||||||| GTTTGAAAAA TCTTGACAAA TCGGTAGGAC CACATGGACC TTGAGTGCAA CAATATTGTT 120 GTCCTCCGAA TGTTGTACAA GGGTTGTTAC ATCCTCCAGG TACCCTAAGT GAACCAGGGC 8270 |||||||||| ||| |||||| |||||||||| ||||||| || |||||||||| |||||||||| GTCCTCCGAA TGTAGTACAA GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GAACCAGGGC 180 ATTCACCGTT TATATTGGCT GTGCATTGAA TTGGATGACA TTTTCCAGGG CCAGGCTTAG 8210 |||||||||| |||||| || ||||||| |||||||||| |||||| || ||||| |||| ATTCACCGTT TATATTAGCA ACACATTGAA TTGGATGACA TTTTCCCGGC CCAGGGTTAG 240 TTGGGCCAAA AGACATAGGG ATGTTGAATC CATCAATAAC AGAAATATCC CAAAAATCTA 8150 ||||||| || |||||||||| |||||||||| |||||||||| |||||| ||| || ||||||| TTGGGCCGAA AGACATAGGG ATGTTGAATC CATCAATAAC AGAAATGTCC CAGAAATCTA 300 GGTTACCAAA CTGGTTCAAA GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT 8090 ||| | ||| || |||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTGCTAAA TTGATTCAAA GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT 360 TGCAATCCAG GACTCCACCA CAATCACCAG TCTGGCACCA ACCTCTTCCA GCACCATCAA 8030 |||| |||| |||||||||| |||||||| | |||||||||| |||||| ||| |||||||||| TGCATTCCAA GACTCCACCA CAATCACCGG TCTGGCACCA ACCTCTACCA GCACCATCAA 420 AGTTGCAATT AGTACGACCC CAAATACGTG CCATTTTAGT GCCAGGTGGG GCCCAAAACC 7970 | |||||||| |||||||||| |||||||||| ||||||| || ||| ||||| |||||||||| AATTGCAATT AGTACGACCC CAAATACGTG CCATTTTGGT GCCCGGTGGA GCCCAAAACC 480 ACCAACTCTG ACCTCTCTCG AGACGTCGAC CACCTCCTAC GGGGACCGCT GCCGCCCAAA 7910 ||||||| || |||||||||| |||||||| | |||||||||| ||| ||| || ||||| | ACCAACTTTG ACCTCTCTCG AGACGTCGGC CACCTCCTAC GGGAGTCGCC GCTGCCCATA 540 CGGTGTAGGG GCAGTTGTTA TGGACCTCAA ATACACCGGA ACCATAAGTG TAAGTCACAA 7850 ||||||| || ||||||||| |||||||||| |||||||||| | |||||||| |||||||||| CGGTGTATGG ACAGTTGTTA TGGACCTCAA ATACACCGGA AGCATAAGTG TAAGTCACAA 600 AGGCAAGGAG AAAAAACACT AAACAAGTTG TCAAGTGACT CATTTTAGTA TAA 7797 |||||||||| ||| |||||| |||||||||| |||| ||||| |||| ||| | ||| AGGCAAGGAG AAACAACACT AAACAAGTTG TCAAATGACT CATTATAGAA TAA 653 hqPGS_C08HBa0235H18.1-_SGN-E305774- (8449 7797) ******************************************************************************** EST sequence 427 -strand 619 n (File: SGN-E209843-) 1 TAACTATAGG CATCGGGACA TCTTTGTTTG AAAAATCTTG ACAAATCGGT AGGACCACAT 61 GGACCTTGAG TGCAACAATA TTGTTGTCCT CCGAATGTAG TACAAGGGTT GTTACATCCT 121 CCGGGTACCC TAAGTGAACC AGGGCATTCA CCGTTTATAT TAGCAACACA TTGAATTGGA 181 TGACATTTTC CCGGCCCAGG GTTAGTTGGG CCGAAAGACA TAGGGATGTT GAATCCATCA 241 ATAACAGAAA TGTCCCAGAA ATCTAAGTTG CTAAATTGAT TCAAAGCGTA TTCAGCTAAG 301 GTGTTTGGTG GTTTACCCCA TCCTTTGCAT TCCAAGACTC CACCACAATC ACCGGTCTGG 361 CACCAACCTC TACCAGCACC ATCAAAATTG CAATTAGTAC GACCCCAAAT ACGTGCCATT 421 TTGGTGCCCG GTGGAGCCCA AAACCACCAA CTTTGACCTC TCTCGAGACG TCGGCCACCT 481 CCTACGGGAG TCGCCGCTGC CCATACGGTG TATGGACAGT TGTTATGGAC CTCAAATACA 541 CCGGAAGCAT AAGTGTAAGT CACAAAGGCA AGGAGAAAGA ACACTAAACA AGTTGTCAAA 601 TGACTCATTT TAGAATAAA Predicted gene structure (within gDNA segment 9456 to 7016): Exon 1 8414 7797 ( 618 n); cDNA 1 618 ( 618 n); score: 0.926 MATCH C08HBa0235H18.1- SGN-E209843- 0.926 618 0.998 C PGS_C08HBa0235H18.1-_SGN-E209843- (8414 7797) Alignment (genomic DNA sequence = upper lines): TAACTATAGG CATCAGGACA TCTTTGTTTG AAAAATCTTG ACAATTCAGT AGGACCACAT 8355 |||||||||| |||| ||||| |||||||||| |||||||||| |||| || || |||||||||| TAACTATAGG CATCGGGACA TCTTTGTTTG AAAAATCTTG ACAAATCGGT AGGACCACAT 60 GGACCGTGAT TACAACAATA TTGTTGTCCT CCGAATGTTG TACAAGGGTT GTTACATCCT 8295 ||||| ||| | |||||||| |||||||||| |||||||| | |||||||||| |||||||||| GGACCTTGAG TGCAACAATA TTGTTGTCCT CCGAATGTAG TACAAGGGTT GTTACATCCT 120 CCAGGTACCC TAAGTGAACC AGGGCATTCA CCGTTTATAT TGGCTGTGCA TTGAATTGGA 8235 || ||||||| |||||||||| |||||||||| |||||||||| | || || |||||||||| CCGGGTACCC TAAGTGAACC AGGGCATTCA CCGTTTATAT TAGCAACACA TTGAATTGGA 180 TGACATTTTC CAGGGCCAGG CTTAGTTGGG CCAAAAGACA TAGGGATGTT GAATCCATCA 8175 |||||||||| | || ||||| ||||||||| || ||||||| |||||||||| |||||||||| TGACATTTTC CCGGCCCAGG GTTAGTTGGG CCGAAAGACA TAGGGATGTT GAATCCATCA 240 ATAACAGAAA TATCCCAAAA ATCTAGGTTA CCAAACTGGT TCAAAGCGTA TTCAGCTAAG 8115 |||||||||| | ||||| || ||||| ||| | ||| || | |||||||||| |||||||||| ATAACAGAAA TGTCCCAGAA ATCTAAGTTG CTAAATTGAT TCAAAGCGTA TTCAGCTAAG 300 GTGTTTGGTG GTTTACCCCA TCCTTTGCAA TCCAGGACTC CACCACAATC ACCAGTCTGG 8055 |||||||||| |||||||||| ||||||||| |||| ||||| |||||||||| ||| |||||| GTGTTTGGTG GTTTACCCCA TCCTTTGCAT TCCAAGACTC CACCACAATC ACCGGTCTGG 360 CACCAACCTC TTCCAGCACC ATCAAAGTTG CAATTAGTAC GACCCCAAAT ACGTGCCATT 7995 |||||||||| | |||||||| |||||| ||| |||||||||| |||||||||| |||||||||| CACCAACCTC TACCAGCACC ATCAAAATTG CAATTAGTAC GACCCCAAAT ACGTGCCATT 420 TTAGTGCCAG GTGGGGCCCA AAACCACCAA CTCTGACCTC TCTCGAGACG TCGACCACCT 7935 || ||||| | |||| ||||| |||||||||| || ||||||| |||||||||| ||| |||||| TTGGTGCCCG GTGGAGCCCA AAACCACCAA CTTTGACCTC TCTCGAGACG TCGGCCACCT 480 CCTACGGGGA CCGCTGCCGC CCAAACGGTG TAGGGGCAGT TGTTATGGAC CTCAAATACA 7875 |||||||| ||| || || ||| |||||| || || |||| |||||||||| |||||||||| CCTACGGGAG TCGCCGCTGC CCATACGGTG TATGGACAGT TGTTATGGAC CTCAAATACA 540 CCGGAACCAT AAGTGTAAGT CACAAAGGCA AGGAGAAAAA ACACTAAACA AGTTGTCAAG 7815 |||||| ||| |||||||||| |||||||||| |||||||| | |||||||||| ||||||||| CCGGAAGCAT AAGTGTAAGT CACAAAGGCA AGGAGAAAGA ACACTAAACA AGTTGTCAAA 600 TGACTCATTT TAGTATAA 7797 |||||||||| ||| |||| TGACTCATTT TAGAATAA 618 hqPGS_C08HBa0235H18.1-_SGN-E209843- (8414 7797) ******************************************************************************** EST sequence 295 -strand 597 n (File: SGN-E207039-) 1 TGTTTGAAAA AATCTTGACA AATCGGTAGG ACCACATGGA CCTTAAGTGC AACAATATTG 61 TTGTCCTCCG AATGTAGTAC AAGGGTTGTT ACATCCTCCG GGTACCCTAA GTGAACCAGG 121 GCATTCACCG TTTATATTAG CAACACATTG AATTGGATGA CATTTTCCCG GCCCAGGGTT 181 AGTTGGGCCG AAAGACATAG GGATGTTGAA TCCATCAATA ACAGAAATGT CCCAGAAATC 241 TAAGTTGCTA AATTGATTCA AAGCGTATTC AGCTAAGGTG TTTGGTGGTT TACCCCATCC 301 TTTGCATTCC AAGACTCCAC CACAATCACC GGTCTGGCAC CAACCTCTAC CAGCACCATC 361 AAAATTGCAA TTAGTACGAC CCCAAATACG TGCCATTTTG GTGCCCGGTG GAGCCCAAAA 421 CCACCAACTT TGACCTCTCT CGAGACGTCG GCCACCTCCT ACGGGAGTCG CCGCTGCCCA 481 TACGGTGTAT GGACAGTTGT TATGGACCTC AAATACACCG GAAGCATAAG TGTAAGTCAC 541 AAAGGCAAGG AGAAAGAACA CTAAACAAGT TGTCAAATGA CTCATTTTAG AATAAAA Predicted gene structure (within gDNA segment 9226 to 7006): Exon 1 8390 7797 ( 594 n); cDNA 1 595 ( 595 n); score: 0.918 MATCH C08HBa0235H18.1- SGN-E207039- 0.918 594 0.995 C PGS_C08HBa0235H18.1-_SGN-E207039- (8390 7797) Alignment (genomic DNA sequence = upper lines): TGTTTGAAA- AATCTTGACA ATTCAGTAGG ACCACATGGA CCGTGATTAC AACAATATTG 8332 ||||||||| |||||||||| | || ||||| |||||||||| || | | | | |||||||||| TGTTTGAAAA AATCTTGACA AATCGGTAGG ACCACATGGA CCTTAAGTGC AACAATATTG 60 TTGTCCTCCG AATGTTGTAC AAGGGTTGTT ACATCCTCCA GGTACCCTAA GTGAACCAGG 8272 |||||||||| ||||| |||| |||||||||| ||||||||| |||||||||| |||||||||| TTGTCCTCCG AATGTAGTAC AAGGGTTGTT ACATCCTCCG GGTACCCTAA GTGAACCAGG 120 GCATTCACCG TTTATATTGG CTGTGCATTG AATTGGATGA CATTTTCCAG GGCCAGGCTT 8212 |||||||||| |||||||| | | ||||| |||||||||| |||||||| | | ||||| || GCATTCACCG TTTATATTAG CAACACATTG AATTGGATGA CATTTTCCCG GCCCAGGGTT 180 AGTTGGGCCA AAAGACATAG GGATGTTGAA TCCATCAATA ACAGAAATAT CCCAAAAATC 8152 ||||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||| ||||| AGTTGGGCCG AAAGACATAG GGATGTTGAA TCCATCAATA ACAGAAATGT CCCAGAAATC 240 TAGGTTACCA AACTGGTTCA AAGCGTATTC AGCTAAGGTG TTTGGTGGTT TACCCCATCC 8092 || ||| | | || || |||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGTTGCTA AATTGATTCA AAGCGTATTC AGCTAAGGTG TTTGGTGGTT TACCCCATCC 300 TTTGCAATCC AGGACTCCAC CACAATCACC AGTCTGGCAC CAACCTCTTC CAGCACCATC 8032 |||||| ||| | |||||||| |||||||||| ||||||||| |||||||| | |||||||||| TTTGCATTCC AAGACTCCAC CACAATCACC GGTCTGGCAC CAACCTCTAC CAGCACCATC 360 AAAGTTGCAA TTAGTACGAC CCCAAATACG TGCCATTTTA GTGCCAGGTG GGGCCCAAAA 7972 ||| |||||| |||||||||| |||||||||| ||||||||| ||||| |||| | |||||||| AAAATTGCAA TTAGTACGAC CCCAAATACG TGCCATTTTG GTGCCCGGTG GAGCCCAAAA 420 CCACCAACTC TGACCTCTCT CGAGACGTCG ACCACCTCCT ACGGGGACCG CTGCCGCCCA 7912 ||||||||| |||||||||| |||||||||| ||||||||| ||||| || | || ||||| CCACCAACTT TGACCTCTCT CGAGACGTCG GCCACCTCCT ACGGGAGTCG CCGCTGCCCA 480 AACGGTGTAG GGGCAGTTGT TATGGACCTC AAATACACCG GAACCATAAG TGTAAGTCAC 7852 |||||||| || ||||||| |||||||||| |||||||||| ||| |||||| |||||||||| TACGGTGTAT GGACAGTTGT TATGGACCTC AAATACACCG GAAGCATAAG TGTAAGTCAC 540 AAAGGCAAGG AGAAAAAACA CTAAACAAGT TGTCAAGTGA CTCATTTTAG TATAA 7797 |||||||||| ||||| |||| |||||||||| |||||| ||| |||||||||| |||| AAAGGCAAGG AGAAAGAACA CTAAACAAGT TGTCAAATGA CTCATTTTAG AATAA 595 hqPGS_C08HBa0235H18.1-_SGN-E207039- (8390 7797) ******************************************************************************** EST sequence 327 -strand 595 n (File: SGN-E543853-) 1 TTGAAAAAAT CTTGACAAAT CGGTAGGACC ACATGACCCT TGAGTGCAAC AATATTGTTG 61 TCCTCCGAAT GTAGTACAAG GGTTGTTACA TCATCCGGGT ACCCTAAGTG AACCAGGGCA 121 TTCACCGTTT ATATTAGCAA CACATTGAAT TGGATGACAT TTTCCCGGCC CAGGGTTAGT 181 TGGGCCGAAA GACATAGGGA TGTTGAATCC ATCAATAACA GAAATGTCCC AGAAATCTAA 241 GTTGCTAAAT TGATTCAAAG CGTATTCAGC TAAGGTGTTT GGTGGTTTAC CCCATCCTTT 301 GCATTCCAAG ACTCCACCAC AATCACCGGT CTGGCACCAA CCTCTACCAG CACCATCAAA 361 ATTGCAATTA GTACGACCCC AAATACGTGC CATTTTGGTG CCCGGTGGAG CCCAAAACCA 421 CCAACTTTGA CCTCTCTCGA GACGTCGGCC ACCTCCTACG GGAGTCGCCG CTGCCCATAC 481 GGTGTATGGA CAGTTGTTAT GGACCTCAAA TACACCGGAA GCATAAGTGT AAGTCACAAA 541 GGCAAGGAGA AAGAACACTA AACAAGTTGT CAAATGACTC ATTTTAGAAT AAAAG Predicted gene structure (within gDNA segment 9412 to 6996): Exon 1 8388 7797 ( 592 n); cDNA 1 592 ( 592 n); score: 0.916 MATCH C08HBa0235H18.1- SGN-E543853- 0.916 592 0.995 C PGS_C08HBa0235H18.1-_SGN-E543853- (8388 7797) Alignment (genomic DNA sequence = upper lines): TTTGAAAAAT CTTGACAATT CAGTAGGACC ACATGGACCG TGATTACAAC AATATTGTTG 8329 || |||||| |||||||| | | |||||||| ||||| || ||| | |||| |||||||||| TTGAAAAAAT CTTGACAAAT CGGTAGGACC ACATGACCCT TGAGTGCAAC AATATTGTTG 60 TCCTCCGAAT GTTGTACAAG GGTTGTTACA TCCTCCAGGT ACCCTAAGTG AACCAGGGCA 8269 |||||||||| || ||||||| |||||||||| || ||| ||| |||||||||| |||||||||| TCCTCCGAAT GTAGTACAAG GGTTGTTACA TCATCCGGGT ACCCTAAGTG AACCAGGGCA 120 TTCACCGTTT ATATTGGCTG TGCATTGAAT TGGATGACAT TTTCCAGGGC CAGGCTTAGT 8209 |||||||||| ||||| || |||||||| |||||||||| ||||| || | |||| ||||| TTCACCGTTT ATATTAGCAA CACATTGAAT TGGATGACAT TTTCCCGGCC CAGGGTTAGT 180 TGGGCCAAAA GACATAGGGA TGTTGAATCC ATCAATAACA GAAATATCCC AAAAATCTAG 8149 |||||| ||| |||||||||| |||||||||| |||||||||| ||||| |||| | ||||||| TGGGCCGAAA GACATAGGGA TGTTGAATCC ATCAATAACA GAAATGTCCC AGAAATCTAA 240 GTTACCAAAC TGGTTCAAAG CGTATTCAGC TAAGGTGTTT GGTGGTTTAC CCCATCCTTT 8089 ||| | ||| || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGCTAAAT TGATTCAAAG CGTATTCAGC TAAGGTGTTT GGTGGTTTAC CCCATCCTTT 300 GCAATCCAGG ACTCCACCAC AATCACCAGT CTGGCACCAA CCTCTTCCAG CACCATCAAA 8029 ||| |||| | |||||||||| ||||||| || |||||||||| ||||| |||| |||||||||| GCATTCCAAG ACTCCACCAC AATCACCGGT CTGGCACCAA CCTCTACCAG CACCATCAAA 360 GTTGCAATTA GTACGACCCC AAATACGTGC CATTTTAGTG CCAGGTGGGG CCCAAAACCA 7969 ||||||||| |||||||||| |||||||||| |||||| ||| || ||||| | |||||||||| ATTGCAATTA GTACGACCCC AAATACGTGC CATTTTGGTG CCCGGTGGAG CCCAAAACCA 420 CCAACTCTGA CCTCTCTCGA GACGTCGACC ACCTCCTACG GGGACCGCTG CCGCCCAAAC 7909 |||||| ||| |||||||||| ||||||| || |||||||||| || ||| | | ||||| || CCAACTTTGA CCTCTCTCGA GACGTCGGCC ACCTCCTACG GGAGTCGCCG CTGCCCATAC 480 GGTGTAGGGG CAGTTGTTAT GGACCTCAAA TACACCGGAA CCATAAGTGT AAGTCACAAA 7849 |||||| || |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| GGTGTATGGA CAGTTGTTAT GGACCTCAAA TACACCGGAA GCATAAGTGT AAGTCACAAA 540 GGCAAGGAGA AAAAACACTA AACAAGTTGT CAAGTGACTC ATTTTAGTAT AA 7797 |||||||||| || ||||||| |||||||||| ||| |||||| ||||||| || || GGCAAGGAGA AAGAACACTA AACAAGTTGT CAAATGACTC ATTTTAGAAT AA 592 hqPGS_C08HBa0235H18.1-_SGN-E543853- (8388 7797) ******************************************************************************** EST sequence 181 -strand 528 n (File: SGN-E304108-) 1 CGAATGTAGT ACAAGGGTTG TTACATCCTC CGGGTACCCT AAGTGAACCA GGGCATTCAC 61 CGTTTATATT AGCAACACAT TGAATTGGAT GACATTTTCC CGGCCCAGGG TTAGTTGGGC 121 CGAAAGACAT AGGGATGTTG AATCCATCAA TAACAGAAAT GTCCCAGAAA TCTAAGTTGC 181 TAAATTGATT CAAAGCGTAT TCAGCTAAGG TGTTTGGTGG TTTACCCCAT CCTTTGCATT 241 CCAAGACTCC ACCACAATCA CCGGTCTGGC ACCAACCTCT ACCAGCACCA TCAAAATTGC 301 AATTAGTACG ACCCCAAATA CGTGCCATTT TGGTGCCCGG TGGAGCCCAA AACCACCAAC 361 TTTGACCTCT CTCGAGACGT CGGCCACCTC CTACGGGAGT CGCCGCTGCC CATACGGTGT 421 ATGGACAGTT GTTATGGACC TCAAATACAC CGGAAGCATA AGTGTAAGTC ACAAAGGCAA 481 GGAGAAAGAA CACTAAACAA GTTGTCAAAT GACTCATTTT AGAATAAA Predicted gene structure (within gDNA segment 9005 to 7016): Exon 1 8323 7797 ( 527 n); cDNA 1 527 ( 527 n); score: 0.924 MATCH C08HBa0235H18.1- SGN-E304108- 0.924 527 0.998 C PGS_C08HBa0235H18.1-_SGN-E304108- (8323 7797) Alignment (genomic DNA sequence = upper lines): CGAATGTTGT ACAAGGGTTG TTACATCCTC CAGGTACCCT AAGTGAACCA GGGCATTCAC 8264 ||||||| || |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| CGAATGTAGT ACAAGGGTTG TTACATCCTC CGGGTACCCT AAGTGAACCA GGGCATTCAC 60 CGTTTATATT GGCTGTGCAT TGAATTGGAT GACATTTTCC AGGGCCAGGC TTAGTTGGGC 8204 |||||||||| || ||| |||||||||| |||||||||| || ||||| |||||||||| CGTTTATATT AGCAACACAT TGAATTGGAT GACATTTTCC CGGCCCAGGG TTAGTTGGGC 120 CAAAAGACAT AGGGATGTTG AATCCATCAA TAACAGAAAT ATCCCAAAAA TCTAGGTTAC 8144 | |||||||| |||||||||| |||||||||| |||||||||| ||||| ||| |||| ||| | CGAAAGACAT AGGGATGTTG AATCCATCAA TAACAGAAAT GTCCCAGAAA TCTAAGTTGC 180 CAAACTGGTT CAAAGCGTAT TCAGCTAAGG TGTTTGGTGG TTTACCCCAT CCTTTGCAAT 8084 ||| || || |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | TAAATTGATT CAAAGCGTAT TCAGCTAAGG TGTTTGGTGG TTTACCCCAT CCTTTGCATT 240 CCAGGACTCC ACCACAATCA CCAGTCTGGC ACCAACCTCT TCCAGCACCA TCAAAGTTGC 8024 ||| |||||| |||||||||| || ||||||| |||||||||| ||||||||| ||||| |||| CCAAGACTCC ACCACAATCA CCGGTCTGGC ACCAACCTCT ACCAGCACCA TCAAAATTGC 300 AATTAGTACG ACCCCAAATA CGTGCCATTT TAGTGCCAGG TGGGGCCCAA AACCACCAAC 7964 |||||||||| |||||||||| |||||||||| | ||||| || ||| |||||| |||||||||| AATTAGTACG ACCCCAAATA CGTGCCATTT TGGTGCCCGG TGGAGCCCAA AACCACCAAC 360 TCTGACCTCT CTCGAGACGT CGACCACCTC CTACGGGGAC CGCTGCCGCC CAAACGGTGT 7904 | |||||||| |||||||||| || ||||||| ||||||| ||| || ||| || ||||||| TTTGACCTCT CTCGAGACGT CGGCCACCTC CTACGGGAGT CGCCGCTGCC CATACGGTGT 420 AGGGGCAGTT GTTATGGACC TCAAATACAC CGGAACCATA AGTGTAAGTC ACAAAGGCAA 7844 | || ||||| |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| ATGGACAGTT GTTATGGACC TCAAATACAC CGGAAGCATA AGTGTAAGTC ACAAAGGCAA 480 GGAGAAAAAA CACTAAACAA GTTGTCAAGT GACTCATTTT AGTATAA 7797 ||||||| || |||||||||| |||||||| | |||||||||| || |||| GGAGAAAGAA CACTAAACAA GTTGTCAAAT GACTCATTTT AGAATAA 527 hqPGS_C08HBa0235H18.1-_SGN-E304108- (8323 7797) ******************************************************************************** EST sequence 348 -strand 452 n (File: SGN-E310823-) 1 ACATTGAATT GGATGACATT TTCCCGGCCC AGGGTTAGTT GGGCCGAAAG ACATAGGGAT 61 GTTGAATCCA TCAATAACAG AAATGTCCCA GAAATCTAAG TTGCTAAATT GATTCAAAGC 121 GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG CATTCCAAGA CTCCACCACA 181 ATCACCGGTC TGGCACCAAC CTCTACCAGC ACCATCAAAA TTGCAATTAG TACGACCCCA 241 AATACGTGCC ATTTTGGTGC CCGGTGGAGC CCAAAACCAC CAACTTTGAC CTCTCTCGAG 301 ACGTCGGCCA CCTCCTACGG GAGTCGCCGC TGCCCATACG GTGTATGGAC AGTTGTTATG 361 GACCTCAAAT ACACCGGAAG CATAAGTGTA AGTCACAAAG GCAAGGAGAA AGAACACTAA 421 ACAAGTTGTC AAATGACTCA TTTTAGAATA AA Predicted gene structure (within gDNA segment 9271 to 7016): Exon 1 8246 7797 ( 450 n); cDNA 2 451 ( 450 n); score: 0.927 MATCH C08HBa0235H18.1- SGN-E310823- 0.927 450 0.996 C PGS_C08HBa0235H18.1-_SGN-E310823- (8246 7797) Alignment (genomic DNA sequence = upper lines): CATTGAATTG GATGACATTT TCCAGGGCCA GGCTTAGTTG GGCCAAAAGA CATAGGGATG 8187 |||||||||| |||||||||| ||| || ||| || ||||||| |||| ||||| |||||||||| CATTGAATTG GATGACATTT TCCCGGCCCA GGGTTAGTTG GGCCGAAAGA CATAGGGATG 61 TTGAATCCAT CAATAACAGA AATATCCCAA AAATCTAGGT TACCAAACTG GTTCAAAGCG 8127 |||||||||| |||||||||| ||| ||||| ||||||| || | | ||| || ||||||||| TTGAATCCAT CAATAACAGA AATGTCCCAG AAATCTAAGT TGCTAAATTG ATTCAAAGCG 121 TATTCAGCTA AGGTGTTTGG TGGTTTACCC CATCCTTTGC AATCCAGGAC TCCACCACAA 8067 |||||||||| |||||||||| |||||||||| |||||||||| | |||| ||| |||||||||| TATTCAGCTA AGGTGTTTGG TGGTTTACCC CATCCTTTGC ATTCCAAGAC TCCACCACAA 181 TCACCAGTCT GGCACCAACC TCTTCCAGCA CCATCAAAGT TGCAATTAGT ACGACCCCAA 8007 ||||| |||| |||||||||| ||| |||||| |||||||| | |||||||||| |||||||||| TCACCGGTCT GGCACCAACC TCTACCAGCA CCATCAAAAT TGCAATTAGT ACGACCCCAA 241 ATACGTGCCA TTTTAGTGCC AGGTGGGGCC CAAAACCACC AACTCTGACC TCTCTCGAGA 7947 |||||||||| |||| ||||| ||||| ||| |||||||||| |||| ||||| |||||||||| ATACGTGCCA TTTTGGTGCC CGGTGGAGCC CAAAACCACC AACTTTGACC TCTCTCGAGA 301 CGTCGACCAC CTCCTACGGG GACCGCTGCC GCCCAAACGG TGTAGGGGCA GTTGTTATGG 7887 ||||| |||| |||||||||| ||| || ||||| |||| |||| || || |||||||||| CGTCGGCCAC CTCCTACGGG AGTCGCCGCT GCCCATACGG TGTATGGACA GTTGTTATGG 361 ACCTCAAATA CACCGGAACC ATAAGTGTAA GTCACAAAGG CAAGGAGAAA AAACACTAAA 7827 |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| ||||||||| ACCTCAAATA CACCGGAAGC ATAAGTGTAA GTCACAAAGG CAAGGAGAAA GAACACTAAA 421 CAAGTTGTCA AGTGACTCAT TTTAGTATAA 7797 |||||||||| | |||||||| ||||| |||| CAAGTTGTCA AATGACTCAT TTTAGAATAA 451 hqPGS_C08HBa0235H18.1-_SGN-E310823- (8246 7797) ******************************************************************************** EST sequence 130 -strand 436 n (File: SGN-E301999-) 1 CATTTTCCCG GCCCAGGGTT AGTTGGGCCG AAAGACATAG GGATGTTGAA TCCATCAATA 61 ACAGAAATGT CCCAGAAATC TAAGTTGCTA AATTGATTCA AAGCGTATTC AGCTAAGGTG 121 TTTGGTGGTT TACCCCATCC TTTGCATTCC AAGACTCCAC CACAATCACC GGTCTGGCAC 181 CAACCTCTAC CAGCACCATC AAAATTGCAA TTAGTACGAC CCCAAATACG TGCCATTTTG 241 GTGCCCGGTG GAGCCCAAAA CCACCAACTT TGACCTCTCT CGAGACGTCG GCCACCTCTT 301 ACGGGAGTCG CCGCTGCCCA TACGGTGTAT GGACAGTTGT TATGGACCTC AAATACACCG 361 GAAGCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAGAACA CTAAACAAGT TGTCAAATGA 421 CTCATTTTAG AATAAA Predicted gene structure (within gDNA segment 9111 to 7016): Exon 1 8231 7797 ( 435 n); cDNA 1 435 ( 435 n); score: 0.922 MATCH C08HBa0235H18.1- SGN-E301999- 0.922 435 0.998 C PGS_C08HBa0235H18.1-_SGN-E301999- (8231 7797) Alignment (genomic DNA sequence = upper lines): CATTTTCCAG GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA TCCATCAATA 8172 |||||||| | | ||||| || ||||||||| |||||||||| |||||||||| |||||||||| CATTTTCCCG GCCCAGGGTT AGTTGGGCCG AAAGACATAG GGATGTTGAA TCCATCAATA 60 ACAGAAATAT CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC AGCTAAGGTG 8112 |||||||| | |||| ||||| || ||| | | || || |||| |||||||||| |||||||||| ACAGAAATGT CCCAGAAATC TAAGTTGCTA AATTGATTCA AAGCGTATTC AGCTAAGGTG 120 TTTGGTGGTT TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC AGTCTGGCAC 8052 |||||||||| |||||||||| |||||| ||| | |||||||| |||||||||| ||||||||| TTTGGTGGTT TACCCCATCC TTTGCATTCC AAGACTCCAC CACAATCACC GGTCTGGCAC 180 CAACCTCTTC CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG TGCCATTTTA 7992 |||||||| | |||||||||| ||| |||||| |||||||||| |||||||||| ||||||||| CAACCTCTAC CAGCACCATC AAAATTGCAA TTAGTACGAC CCCAAATACG TGCCATTTTG 240 GTGCCAGGTG GGGCCCAAAA CCACCAACTC TGACCTCTCT CGAGACGTCG ACCACCTCCT 7932 ||||| |||| | |||||||| ||||||||| |||||||||| |||||||||| ||||||| | GTGCCCGGTG GAGCCCAAAA CCACCAACTT TGACCTCTCT CGAGACGTCG GCCACCTCTT 300 ACGGGGACCG CTGCCGCCCA AACGGTGTAG GGGCAGTTGT TATGGACCTC AAATACACCG 7872 ||||| || | || ||||| |||||||| || ||||||| |||||||||| |||||||||| ACGGGAGTCG CCGCTGCCCA TACGGTGTAT GGACAGTTGT TATGGACCTC AAATACACCG 360 GAACCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAAAACA CTAAACAAGT TGTCAAGTGA 7812 ||| |||||| |||||||||| |||||||||| ||||| |||| |||||||||| |||||| ||| GAAGCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAGAACA CTAAACAAGT TGTCAAATGA 420 CTCATTTTAG TATAA 7797 |||||||||| |||| CTCATTTTAG AATAA 435 hqPGS_C08HBa0235H18.1-_SGN-E301999- (8231 7797) ******************************************************************************** EST sequence 246 -strand 584 n (File: SGN-E268610-) 1 GAAAAATCTT GACAAATCGG TAGGACCACA TGGACCTTGA GTGCAACAAT ATTGTTGTCC 61 TCCGAATGTA GTACAAGGGT TGTTACATCC TCCGGGTACC TTAAGTGAAC CAGGGCATTC 121 ACCGTTTATA TTAGCAACAC ATTGAATTGG ATGACATTTT CCCGGCCCAG GGTTAGTTGG 181 GCCGAAAGAC ATAGGGATGT TGAATCCATC AATAACAGAA ATGTCCCAGA AATCTAAGTT 241 GCTAAATTGA TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA 301 TTCCAAGACT CCACCACAAT CACCGGTCTG GCACCAACCT CTACCAGCAC CATCAAAATT 361 GCAATTAGTA CGACCCCAAA TACGTGCCAT TTTGGTGCCC GGTGGAGCCC AAAACCACCA 421 ACTTTGACCT CTCTCGAGAC GTCGGCCACC TCCTACGGGA GTCGCCGCTG CCCATACGGT 481 GTATGGACAG TTGTTATGGA CCTCAAATAC ACCGGAAGCA TAAGTGTAAG TCACAAAGCG 541 CAAGGAGAAA GAACACTAAA CAAGTTGTCA AATGACTCAT TTTA Predicted gene structure (within gDNA segment 9166 to 7086): Exon 1 8385 7803 ( 583 n); cDNA 1 584 ( 584 n); score: 0.919 MATCH C08HBa0235H18.1- SGN-E268610- 0.919 583 0.998 C PGS_C08HBa0235H18.1-_SGN-E268610- (8385 7803) Alignment (genomic DNA sequence = upper lines): GAAAAATCTT GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC 8326 |||||||||| ||||| || | |||||||||| |||||| ||| | ||||||| |||||||||| GAAAAATCTT GACAAATCGG TAGGACCACA TGGACCTTGA GTGCAACAAT ATTGTTGTCC 60 TCCGAATGTT GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC 8266 ||||||||| |||||||||| |||||||||| ||| |||||| ||||||||| |||||||||| TCCGAATGTA GTACAAGGGT TGTTACATCC TCCGGGTACC TTAAGTGAAC CAGGGCATTC 120 ACCGTTTATA TTGGCTGTGC ATTGAATTGG ATGACATTTT CCAGGGCCAG GCTTAGTTGG 8206 |||||||||| || || | |||||||||| |||||||||| || || |||| | |||||||| ACCGTTTATA TTAGCAACAC ATTGAATTGG ATGACATTTT CCCGGCCCAG GGTTAGTTGG 180 GCCAAAAGAC ATAGGGATGT TGAATCCATC AATAACAGAA ATATCCCAAA AATCTAGGTT 8146 ||| |||||| |||||||||| |||||||||| |||||||||| || ||||| | |||||| ||| GCCGAAAGAC ATAGGGATGT TGAATCCATC AATAACAGAA ATGTCCCAGA AATCTAAGTT 240 ACCAAACTGG TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA 8086 | ||| || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTAAATTGA TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA 300 ATCCAGGACT CCACCACAAT CACCAGTCTG GCACCAACCT CTTCCAGCAC CATCAAAGTT 8026 |||| |||| |||||||||| |||| ||||| |||||||||| || ||||||| ||||||| || TTCCAAGACT CCACCACAAT CACCGGTCTG GCACCAACCT CTACCAGCAC CATCAAAATT 360 GCAATTAGTA CGACCCCAAA TACGTGCCAT TTTAGTGCCA GGTGGGGCCC AAAACCACCA 7966 |||||||||| |||||||||| |||||||||| ||| ||||| ||||| |||| |||||||||| GCAATTAGTA CGACCCCAAA TACGTGCCAT TTTGGTGCCC GGTGGAGCCC AAAACCACCA 420 ACTCTGACCT CTCTCGAGAC GTCGACCACC TCCTACGGGG ACCGCTGCCG CCCAAACGGT 7906 ||| |||||| |||||||||| |||| ||||| ||||||||| ||| || | |||| ||||| ACTTTGACCT CTCTCGAGAC GTCGGCCACC TCCTACGGGA GTCGCCGCTG CCCATACGGT 480 GTAGGGGCAG TTGTTATGGA CCTCAAATAC ACCGGAACCA TAAGTGTAAG TCACAAAG-G 7847 ||| || ||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||| | GTATGGACAG TTGTTATGGA CCTCAAATAC ACCGGAAGCA TAAGTGTAAG TCACAAAGCG 540 CAAGGAGAAA AAACACTAAA CAAGTTGTCA AGTGACTCAT TTTA 7803 |||||||||| ||||||||| |||||||||| | |||||||| |||| CAAGGAGAAA GAACACTAAA CAAGTTGTCA AATGACTCAT TTTA 584 hqPGS_C08HBa0235H18.1-_SGN-E268610- (8385 7803) ******************************************************************************** EST sequence 90 -strand 566 n (File: SGN-E305497-) 1 CAGTAGGACC ACATGGCCCG TGATTACATC AATATTGTTG TCCTCCGAAT GTTGTACAAG 61 GGTTGTTACA TCCTCCAGGT ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTGGCTG 121 TGCATTGAAT TGGATGACAT TTTCCAGGGC CAGGCTTAGT TGGGCCAAAA GACATAGGGA 181 TGTTGAATCC ATCAATAACA GAAATATCCC AAAAATCTAG GTTACCAAAC TGGTTCAAAG 241 CGTATTCAGC TAAGGTGTTT GGTGGTTTAC CCCATCCTTT GCAATCCAGG ACTCCACCAC 301 AATCACCAGT CTGGCACCAA CCTCTTCCAG CACCATCAAA GTTGCAATTA GTACGACCCC 361 AAATACGTGC CATTTTAGTG CCAGGTGGGG CCCAAAACCA CCAACTCTGA CCTCTCTCGA 421 GACGTCGACC ACCTCCTACG GGGACCGCTG CCGCCCAAAC GGTGTAGGGG CAGTTGTTAT 481 GGACCTCAAA TACACCGGAA CCATAAGTGT AAGTCACAAA GGCAAGGAGA AAAAACACTA 541 AACAAGTTGT CAAGTGACTC ATTTTA Predicted gene structure (within gDNA segment 8978 to 7203): Exon 1 8368 7803 ( 566 n); cDNA 1 566 ( 566 n); score: 0.996 MATCH C08HBa0235H18.1- SGN-E305497- 0.996 566 1.000 C PGS_C08HBa0235H18.1-_SGN-E305497- (8368 7803) Alignment (genomic DNA sequence = upper lines): CAGTAGGACC ACATGGACCG TGATTACAAC AATATTGTTG TCCTCCGAAT GTTGTACAAG 8309 |||||||||| |||||| ||| |||||||| | |||||||||| |||||||||| |||||||||| CAGTAGGACC ACATGGCCCG TGATTACATC AATATTGTTG TCCTCCGAAT GTTGTACAAG 60 GGTTGTTACA TCCTCCAGGT ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTGGCTG 8249 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTTGTTACA TCCTCCAGGT ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTGGCTG 120 TGCATTGAAT TGGATGACAT TTTCCAGGGC CAGGCTTAGT TGGGCCAAAA GACATAGGGA 8189 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCATTGAAT TGGATGACAT TTTCCAGGGC CAGGCTTAGT TGGGCCAAAA GACATAGGGA 180 TGTTGAATCC ATCAATAACA GAAATATCCC AAAAATCTAG GTTACCAAAC TGGTTCAAAG 8129 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTGAATCC ATCAATAACA GAAATATCCC AAAAATCTAG GTTACCAAAC TGGTTCAAAG 240 CGTATTCAGC TAAGGTGTTT GGTGGTTTAC CCCATCCTTT GCAATCCAGG ACTCCACCAC 8069 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTATTCAGC TAAGGTGTTT GGTGGTTTAC CCCATCCTTT GCAATCCAGG ACTCCACCAC 300 AATCACCAGT CTGGCACCAA CCTCTTCCAG CACCATCAAA GTTGCAATTA GTACGACCCC 8009 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATCACCAGT CTGGCACCAA CCTCTTCCAG CACCATCAAA GTTGCAATTA GTACGACCCC 360 AAATACGTGC CATTTTAGTG CCAGGTGGGG CCCAAAACCA CCAACTCTGA CCTCTCTCGA 7949 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATACGTGC CATTTTAGTG CCAGGTGGGG CCCAAAACCA CCAACTCTGA CCTCTCTCGA 420 GACGTCGACC ACCTCCTACG GGGACCGCTG CCGCCCAAAC GGTGTAGGGG CAGTTGTTAT 7889 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACGTCGACC ACCTCCTACG GGGACCGCTG CCGCCCAAAC GGTGTAGGGG CAGTTGTTAT 480 GGACCTCAAA TACACCGGAA CCATAAGTGT AAGTCACAAA GGCAAGGAGA AAAAACACTA 7829 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGACCTCAAA TACACCGGAA CCATAAGTGT AAGTCACAAA GGCAAGGAGA AAAAACACTA 540 AACAAGTTGT CAAGTGACTC ATTTTA 7803 |||||||||| |||||||||| |||||| AACAAGTTGT CAAGTGACTC ATTTTA 566 hqPGS_C08HBa0235H18.1-_SGN-E305497- (8368 7803) ******************************************************************************** EST sequence 97 -strand 481 n (File: SGN-E305272-) 1 AAGTGAACCA GGGCATTCAC CGTTTATATT GGCTGTGCAT TGAATTGGAT GACATTTTCC 61 AGGGCCAGGC TTAGTTGGGC CAAAAGACAT AGGGATGTTG AATCCATCAA TAACAGAAAT 121 ATCCCAAAAA TCTAGGTTAC CAAACTGGTT CAAAGCGTAT TCAGCTAAGG TGTTTGGTGG 181 TTTACCCCAT CCTTTGCAAT CCAGGACTCC ACCACAATCA CCAGTCTGGC ACCAACCTCT 241 TCCAGCACCA TCAAAGTTGC AATTAGTACG ACCCCAAATA CGTGCCATTT TAGTGCCAGG 301 TGGGGCCCAA AACCACCAAC TCTGACCTCT CTCGAGACGT CGACCACCTC CTACGGGGAC 361 CGCTGCCGCC CAAACGGTGT AGGGGCAGTT GTTATGGACC TCAAATACAC CGGAACCATA 421 AGTGTAAGTC ACAAAGGCAA GGAGAAAAAA CACTAAACAA GTTGTCAAGT GACTCATTTT 481 A Predicted gene structure (within gDNA segment 8893 to 7203): Exon 1 8283 7803 ( 481 n); cDNA 1 481 ( 481 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E305272- 1.000 481 1.000 C PGS_C08HBa0235H18.1-_SGN-E305272- (8283 7803) Alignment (genomic DNA sequence = upper lines): AAGTGAACCA GGGCATTCAC CGTTTATATT GGCTGTGCAT TGAATTGGAT GACATTTTCC 8224 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTGAACCA GGGCATTCAC CGTTTATATT GGCTGTGCAT TGAATTGGAT GACATTTTCC 60 AGGGCCAGGC TTAGTTGGGC CAAAAGACAT AGGGATGTTG AATCCATCAA TAACAGAAAT 8164 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGCCAGGC TTAGTTGGGC CAAAAGACAT AGGGATGTTG AATCCATCAA TAACAGAAAT 120 ATCCCAAAAA TCTAGGTTAC CAAACTGGTT CAAAGCGTAT TCAGCTAAGG TGTTTGGTGG 8104 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCCCAAAAA TCTAGGTTAC CAAACTGGTT CAAAGCGTAT TCAGCTAAGG TGTTTGGTGG 180 TTTACCCCAT CCTTTGCAAT CCAGGACTCC ACCACAATCA CCAGTCTGGC ACCAACCTCT 8044 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTACCCCAT CCTTTGCAAT CCAGGACTCC ACCACAATCA CCAGTCTGGC ACCAACCTCT 240 TCCAGCACCA TCAAAGTTGC AATTAGTACG ACCCCAAATA CGTGCCATTT TAGTGCCAGG 7984 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCAGCACCA TCAAAGTTGC AATTAGTACG ACCCCAAATA CGTGCCATTT TAGTGCCAGG 300 TGGGGCCCAA AACCACCAAC TCTGACCTCT CTCGAGACGT CGACCACCTC CTACGGGGAC 7924 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGGGCCCAA AACCACCAAC TCTGACCTCT CTCGAGACGT CGACCACCTC CTACGGGGAC 360 CGCTGCCGCC CAAACGGTGT AGGGGCAGTT GTTATGGACC TCAAATACAC CGGAACCATA 7864 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTGCCGCC CAAACGGTGT AGGGGCAGTT GTTATGGACC TCAAATACAC CGGAACCATA 420 AGTGTAAGTC ACAAAGGCAA GGAGAAAAAA CACTAAACAA GTTGTCAAGT GACTCATTTT 7804 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTGTAAGTC ACAAAGGCAA GGAGAAAAAA CACTAAACAA GTTGTCAAGT GACTCATTTT 480 A 7803 | A 481 hqPGS_C08HBa0235H18.1-_SGN-E305272- (8283 7803) ******************************************************************************** EST sequence 204 -strand 429 n (File: SGN-E306238-) 1 CATTTTCCAG GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA TCCATCAATA 61 ACAGAAATAT CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC AGCTAAGGTG 121 TTTGGTGGTT TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC AGTCTGGCAC 181 CAACCTCTTC CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG TGCCATTTTA 241 GTGCCAGGTG GGGCCCAAAA CCACCAACTC TGACCTCTCT CGAGACGTCG ACCACCTCCT 301 ACGGGGACCG CTGCCGCCCA AACGGTGTAG GGGCAGTTGT TATGGACTTC AAATACACCG 361 GAACCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAAAACA CTAAACAAGT TGTCAAGTGA 421 CTCATTTTA Predicted gene structure (within gDNA segment 8841 to 7203): Exon 1 8231 7803 ( 429 n); cDNA 1 429 ( 429 n); score: 0.998 MATCH C08HBa0235H18.1- SGN-E306238- 0.998 429 1.000 C PGS_C08HBa0235H18.1-_SGN-E306238- (8231 7803) Alignment (genomic DNA sequence = upper lines): CATTTTCCAG GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA TCCATCAATA 8172 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTTTCCAG GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA TCCATCAATA 60 ACAGAAATAT CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC AGCTAAGGTG 8112 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAGAAATAT CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC AGCTAAGGTG 120 TTTGGTGGTT TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC AGTCTGGCAC 8052 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGGTGGTT TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC AGTCTGGCAC 180 CAACCTCTTC CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG TGCCATTTTA 7992 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACCTCTTC CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG TGCCATTTTA 240 GTGCCAGGTG GGGCCCAAAA CCACCAACTC TGACCTCTCT CGAGACGTCG ACCACCTCCT 7932 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGCCAGGTG GGGCCCAAAA CCACCAACTC TGACCTCTCT CGAGACGTCG ACCACCTCCT 300 ACGGGGACCG CTGCCGCCCA AACGGTGTAG GGGCAGTTGT TATGGACCTC AAATACACCG 7872 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| ACGGGGACCG CTGCCGCCCA AACGGTGTAG GGGCAGTTGT TATGGACTTC AAATACACCG 360 GAACCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAAAACA CTAAACAAGT TGTCAAGTGA 7812 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAACCATAAG TGTAAGTCAC AAAGGCAAGG AGAAAAAACA CTAAACAAGT TGTCAAGTGA 420 CTCATTTTA 7803 ||||||||| CTCATTTTA 429 hqPGS_C08HBa0235H18.1-_SGN-E306238- (8231 7803) ******************************************************************************** EST sequence 334 -strand 400 n (File: SGN-E267258-) 1 AAAAGACATA GGGATGTTGA ATCCATCAAT AACAGAAATA TCCCAAAAAT CTAGGTTACC 61 AAACTGGTTC AAAGCGTATT CAGCTAAGGT GTTTGGTGGT TTACCCCATC CTTTGCAATC 121 CAGGACTCCA CCACAATCAC CAGTCTGGCA CCAACCTCTT CCAGCACCAT CAAAGTTGCA 181 ATTAGTACGA CCCCAAATAC GTGCCATTTT AGTGCCAGGT GGGGCCCAAA ACCACCAACT 241 CTGACCTCTC TCGAGACGTC GACCACCTCC TACGGGGACC GCTGCCGCCC AAACGGTGTA 301 GGGGCAGTTG TTATGGACCT CAAATACACC GGAACCATAA GTGTAAGTCA CAAAGGCAAG 361 GAGAAAAAAC ACTAAACAAG TTGTCAAGTA ACTCATTTTA Predicted gene structure (within gDNA segment 8812 to 7104): Exon 1 8202 7803 ( 400 n); cDNA 1 400 ( 400 n); score: 0.998 MATCH C08HBa0235H18.1- SGN-E267258- 0.998 400 1.000 C PGS_C08HBa0235H18.1-_SGN-E267258- (8202 7803) Alignment (genomic DNA sequence = upper lines): AAAAGACATA GGGATGTTGA ATCCATCAAT AACAGAAATA TCCCAAAAAT CTAGGTTACC 8143 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAGACATA GGGATGTTGA ATCCATCAAT AACAGAAATA TCCCAAAAAT CTAGGTTACC 60 AAACTGGTTC AAAGCGTATT CAGCTAAGGT GTTTGGTGGT TTACCCCATC CTTTGCAATC 8083 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACTGGTTC AAAGCGTATT CAGCTAAGGT GTTTGGTGGT TTACCCCATC CTTTGCAATC 120 CAGGACTCCA CCACAATCAC CAGTCTGGCA CCAACCTCTT CCAGCACCAT CAAAGTTGCA 8023 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGGACTCCA CCACAATCAC CAGTCTGGCA CCAACCTCTT CCAGCACCAT CAAAGTTGCA 180 ATTAGTACGA CCCCAAATAC GTGCCATTTT AGTGCCAGGT GGGGCCCAAA ACCACCAACT 7963 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAGTACGA CCCCAAATAC GTGCCATTTT AGTGCCAGGT GGGGCCCAAA ACCACCAACT 240 CTGACCTCTC TCGAGACGTC GACCACCTCC TACGGGGACC GCTGCCGCCC AAACGGTGTA 7903 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGACCTCTC TCGAGACGTC GACCACCTCC TACGGGGACC GCTGCCGCCC AAACGGTGTA 300 GGGGCAGTTG TTATGGACCT CAAATACACC GGAACCATAA GTGTAAGTCA CAAAGGCAAG 7843 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGGCAGTTG TTATGGACCT CAAATACACC GGAACCATAA GTGTAAGTCA CAAAGGCAAG 360 GAGAAAAAAC ACTAAACAAG TTGTCAAGTG ACTCATTTTA 7803 |||||||||| |||||||||| ||||||||| |||||||||| GAGAAAAAAC ACTAAACAAG TTGTCAAGTA ACTCATTTTA 400 hqPGS_C08HBa0235H18.1-_SGN-E267258- (8202 7803) ******************************************************************************** EST sequence 207 -strand 542 n (File: SGN-E215146-) 1 GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 61 CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 121 TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 181 AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 241 GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 301 TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 361 CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG 421 AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA 481 AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT AGCCCATGTT 541 TG Predicted gene structure (within gDNA segment 8992 to 2876): Exon 1 8342 7804 ( 539 n); cDNA 5 540 ( 536 n); score: 0.781 MATCH C08HBa0235H18.1- SGN-E215146- 0.781 539 0.994 C PGS_C08HBa0235H18.1-_SGN-E215146- (8342 7804) Alignment (genomic DNA sequence = upper lines): CAACAATATT GTTGTCCTCC GAATGTTGTA CAAGGGTTGT TACATCCTCC AGGTACCCTA 8283 |||||||||| |||||||||| || || ||| |||||||||| |||||||||| ||||||| || CAACAATATT GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA 64 AGTGAACCAG GGCATTCACC GTTTATATTG GCTGTGCATT GAATTGGATG ACATTTTCCA 8223 || | | || | |||||||| ||||||||| || ||||| | |||||| || ||||||||| AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 124 GGGCCAGGCT TAGTTGGGCC AAAAGACATA GGGATGTTGA ATCCATCAAT AACAGAAATA 8163 | ||| | | |||||| | ||||| ||| || || || | ||||||| | | |||||| CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 184 TCCCAAAAAT CTAGGTTACC AAACTGGTTC AAAGCGTATT CAGCTAAGGT GTTTGGTGGT 8103 |||||||||| ||| ||| | |||||||| | || ||||| | | |||| ||| |||||| ||| TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT 244 TTACCCCATC CTTTGCAATC CAGGACTCCA CCACAATCAC CAGTCTGGCA CCAACCTCTT 8043 || ||||||| | | || | | ||||||| |||||||||| ||||||| || |||||| TTGCCCCATC CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG 304 CCAGCACCAT CAAAGTTGCA ATTAGTACGA CCCCAAATAC GTGCCATTTT AGTGCCAGGT 7983 || ||| ||| ||||||||| | ||||||| ||||| |||| ||||||| || ||| || CCTGCAGCAT TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC 364 GGGGCCCAAA ACCACCAACT CTGACCTCTC TCGAGACGTC GACCACCTCC TACGGGGACC 7923 || || | ||| | || |||| | |||||||| ||||||| || || || | GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC 424 GCTGCCGCCC AAACGGTGTA GGGGCAGTTG TTATGGACCT CAAATACACC GGAACCATAA 7863 | |||||||| |||||||||| || |||||| || | |||| | ||| | || | ||||| GATGCCGCCC AAACGGTGTA TGGACAGTTG TTGCGTACCT C-AAT--AGT GGCAGCATAA 481 GTGTAAGTCA CAAAGGCAAG GAGAAAAAAC ACTAAACAAG TTGTCAAGTG ACTCATTTT 7804 || ||||||| || | ||| || || | || ||| ||| |||||||| | ||| || GTATAAGTCA CACAAAGAAG GAAGAAGAGA ACAAAAGAAG ATGTCAAGTA GCCCATGTT 540 hqPGS_C08HBa0235H18.1-_SGN-E215146- (8342 7804) ******************************************************************************** EST sequence 279 -strand 535 n (File: SGN-E275948-) 1 TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 61 ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 121 TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 181 GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 241 GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 301 CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 361 CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 421 GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT AGTGGCAGCA 481 TAAGTATAAG TCACTCAAAG AAGGAAGAAG AGAACAAAAG AAGATGTCAA GTAGC Predicted gene structure (within gDNA segment 9012 to 2966): Exon 1 8348 7814 ( 535 n); cDNA 1 532 ( 532 n); score: 0.779 MATCH C08HBa0235H18.1- SGN-E275948- 0.779 535 1.000 C PGS_C08HBa0235H18.1-_SGN-E275948- (8348 7814) Alignment (genomic DNA sequence = upper lines): TGATTACAAC AATATTGTTG TCCTCCGAAT GTTGTACAAG GGTTGTTACA TCCTCCAGGT 8289 || | |||| |||||||||| |||||| || || ||||||| |||||||||| |||||||||| TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 60 ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTGGCTG TGCATTGAAT TGGATGACAT 8229 ||| |||| | | ||| || |||||| ||| |||||||| | |||| ||||| || |||||| ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 120 TTTCCAGGGC CAGGCTTAGT TGGGCCAAAA GACATAGGGA TGTTGAATCC ATCAATAACA 8169 ||||| | ||| || || |||| ||||| | ||| || | | || ||||| ||| | | | TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 180 GAAATATCCC AAAAATCTAG GTTACCAAAC TGGTTCAAAG CGTATTCAGC TAAGGTGTTT 8109 ||||| |||| ||||||||| ||| | |||| |||| ||| | |||| || || || ||||||| GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 240 GGTGGTTTAC CCCATCCTTT GCAATCCAGG ACTCCACCAC AATCACCAGT CTGGCACCAA 8049 || ||||| | ||||||| | || | | | |||||||||| |||||||||| ||| || | GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 300 CCTCTTCCAG CACCATCAAA GTTGCAATTA GTACGACCCC AAATACGTGC CATTTTAGTG 7989 ||||| || | || ||| ||| ||||||| | |||||||||| | |||||||| ||| ||||| CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 360 CCAGGTGGGG CCCAAAACCA CCAACTCTGA CCTCTCTCGA GACGTCGACC ACCTCCTACG 7929 || || | | | ||| | || |||| | || |||||||||| ||| |||| CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 420 GGGACCGCTG CCGCCCAAAC GGTGTAGGGG CAGTTGTTAT GGACCTCAAA TACACCGGAA 7869 || || || |||||||||| |||||| || |||||||| | ||||| || | | || | GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTC-AA T--AGTGGCA 477 CCATAAGTGT AAGTCACAAA GGCAAGGAGA AAAAACACTA AACAAGTTGT CAAGT 7814 ||||||| | ||||||| | ||||| || | || | || ||| ||| ||||| GCATAAGTAT AAGTCACTCA AAGAAGGAAG AAGAGAACAA AAGAAGATGT CAAGT 532 hqPGS_C08HBa0235H18.1-_SGN-E275948- (8348 7814) ******************************************************************************** EST sequence 321 -strand 531 n (File: SGN-E206874-) 1 GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 61 CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 121 TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 181 AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 241 GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 301 TCTGCCTGCA GCATTATAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 361 CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG 421 AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA 481 AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT A Predicted gene structure (within gDNA segment 8992 to 2986): Exon 1 8342 7814 ( 529 n); cDNA 5 530 ( 526 n); score: 0.783 MATCH C08HBa0235H18.1- SGN-E206874- 0.783 529 0.996 C PGS_C08HBa0235H18.1-_SGN-E206874- (8342 7814) Alignment (genomic DNA sequence = upper lines): CAACAATATT GTTGTCCTCC GAATGTTGTA CAAGGGTTGT TACATCCTCC AGGTACCCTA 8283 |||||||||| |||||||||| || || ||| |||||||||| |||||||||| ||||||| || CAACAATATT GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA 64 AGTGAACCAG GGCATTCACC GTTTATATTG GCTGTGCATT GAATTGGATG ACATTTTCCA 8223 || | | || | |||||||| ||||||||| || ||||| | |||||| || ||||||||| AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 124 GGGCCAGGCT TAGTTGGGCC AAAAGACATA GGGATGTTGA ATCCATCAAT AACAGAAATA 8163 | ||| | | |||||| | ||||| ||| || || || | ||||||| | | |||||| CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 184 TCCCAAAAAT CTAGGTTACC AAACTGGTTC AAAGCGTATT CAGCTAAGGT GTTTGGTGGT 8103 |||||||||| ||| ||| | |||||||| | || ||||| | | |||| ||| |||||| ||| TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT 244 TTACCCCATC CTTTGCAATC CAGGACTCCA CCACAATCAC CAGTCTGGCA CCAACCTCTT 8043 || ||||||| | | || | | ||||||| |||||||||| ||||||| || |||||| TTGCCCCATC CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG 304 CCAGCACCAT CAAAGTTGCA ATTAGTACGA CCCCAAATAC GTGCCATTTT AGTGCCAGGT 7983 || ||| ||| | ||||||| | ||||||| ||||| |||| ||||||| || ||| || CCTGCAGCAT TATAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC 364 GGGGCCCAAA ACCACCAACT CTGACCTCTC TCGAGACGTC GACCACCTCC TACGGGGACC 7923 || || | ||| | || |||| | |||||||| ||||||| || || || | GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC 424 GCTGCCGCCC AAACGGTGTA GGGGCAGTTG TTATGGACCT CAAATACACC GGAACCATAA 7863 | |||||||| |||||||||| || |||||| || | |||| | ||| | || | ||||| GATGCCGCCC AAACGGTGTA TGGACAGTTG TTGCGTACCT C-AAT--AGT GGCAGCATAA 481 GTGTAAGTCA CAAAGGCAAG GAGAAAAAAC ACTAAACAAG TTGTCAAGT 7814 || ||||||| || | ||| || || | || ||| ||| |||||||| GTATAAGTCA CACAAAGAAG GAAGAAGAGA ACAAAAGAAG ATGTCAAGT 530 hqPGS_C08HBa0235H18.1-_SGN-E206874- (8342 7814) ******************************************************************************** EST sequence 413 -strand 482 n (File: SGN-E279388-) 1 TCCTCCAGGT ACCCTAAGTG AACCAGGGCA TTCTCCGTAT ATATGGCCTG TGCATTGAAT 61 TGCATGGCAT TTTCCAGGGC CAGGCTTAGT AGGGCCTAAA GACATAGGGA TGTTGAATCC 121 ATCAATATCA GAAATATCCC AAAAATCTAG GTTACCAAAT TGGTTCAAAG CGTATTCAGC 181 TAAGGTGTTG GGTGGTTTAC CCCATCCATT GCAAGCCAGG ACTCCACCAC AATCACCAGT 241 CTGGCACCAA CCTCTTCCAG CACCATCAAA GTTGCAATTA GTACGACCCC AAATACGTGC 301 CATTTTAGTG CCAGGTGGGG CCCAAAACCA CCAACTCTGA CCTCTCTCGA GACGTCGACC 361 ACCTCCTACG GGGTCCGCTG CCGCCCAATC GGTGTAGGGG CAGTTGTTAT GGACCTCAAA 421 TACACCGGAA CCATAAGTGT AAGTCACAAA GGCAAGGAGA AAAAACACTA AACAAGTTGT 481 CA Predicted gene structure (within gDNA segment 8908 to 7217): Exon 1 8298 7817 ( 482 n); cDNA 1 482 ( 482 n); score: 0.969 MATCH C08HBa0235H18.1- SGN-E279388- 0.969 482 1.000 C PGS_C08HBa0235H18.1-_SGN-E279388- (8298 7817) Alignment (genomic DNA sequence = upper lines): TCCTCCAGGT ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTGGCTG TGCATTGAAT 8239 |||||||||| |||||||||| |||||||||| ||| |||| | |||| | ||| |||||||||| TCCTCCAGGT ACCCTAAGTG AACCAGGGCA TTCTCCGTAT ATATGGCCTG TGCATTGAAT 60 TGGATGACAT TTTCCAGGGC CAGGCTTAGT TGGGCCAAAA GACATAGGGA TGTTGAATCC 8179 || ||| ||| |||||||||| |||||||||| ||||| ||| |||||||||| |||||||||| TGCATGGCAT TTTCCAGGGC CAGGCTTAGT AGGGCCTAAA GACATAGGGA TGTTGAATCC 120 ATCAATAACA GAAATATCCC AAAAATCTAG GTTACCAAAC TGGTTCAAAG CGTATTCAGC 8119 ||||||| || |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| ATCAATATCA GAAATATCCC AAAAATCTAG GTTACCAAAT TGGTTCAAAG CGTATTCAGC 180 TAAGGTGTTT GGTGGTTTAC CCCATCCTTT GCAATCCAGG ACTCCACCAC AATCACCAGT 8059 ||||||||| |||||||||| ||||||| || |||| ||||| |||||||||| |||||||||| TAAGGTGTTG GGTGGTTTAC CCCATCCATT GCAAGCCAGG ACTCCACCAC AATCACCAGT 240 CTGGCACCAA CCTCTTCCAG CACCATCAAA GTTGCAATTA GTACGACCCC AAATACGTGC 7999 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGGCACCAA CCTCTTCCAG CACCATCAAA GTTGCAATTA GTACGACCCC AAATACGTGC 300 CATTTTAGTG CCAGGTGGGG CCCAAAACCA CCAACTCTGA CCTCTCTCGA GACGTCGACC 7939 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTTTAGTG CCAGGTGGGG CCCAAAACCA CCAACTCTGA CCTCTCTCGA GACGTCGACC 360 ACCTCCTACG GGGACCGCTG CCGCCCAAAC GGTGTAGGGG CAGTTGTTAT GGACCTCAAA 7879 |||||||||| ||| |||||| |||||||| | |||||||||| |||||||||| |||||||||| ACCTCCTACG GGGTCCGCTG CCGCCCAATC GGTGTAGGGG CAGTTGTTAT GGACCTCAAA 420 TACACCGGAA CCATAAGTGT AAGTCACAAA GGCAAGGAGA AAAAACACTA AACAAGTTGT 7819 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACACCGGAA CCATAAGTGT AAGTCACAAA GGCAAGGAGA AAAAACACTA AACAAGTTGT 480 CA 7817 || CA 482 hqPGS_C08HBa0235H18.1-_SGN-E279388- (8298 7817) ******************************************************************************** EST sequence 411 -strand 525 n (File: SGN-E208900-) 1 GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 61 CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 121 TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 181 AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 241 GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 301 CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 361 CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 421 GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT 481 AAGTATAAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA AGATG Predicted gene structure (within gDNA segment 9002 to 3056): Exon 1 8342 7820 ( 523 n); cDNA 6 525 ( 520 n); score: 0.782 MATCH C08HBa0235H18.1- SGN-E208900- 0.782 523 0.996 C PGS_C08HBa0235H18.1-_SGN-E208900- (8342 7820) Alignment (genomic DNA sequence = upper lines): CAACAATATT GTTGTCCTCC GAATGTTGTA CAAGGGTTGT TACATCCTCC AGGTACCCTA 8283 |||||||||| |||||||||| || || ||| |||||||||| |||||||||| ||||||| || CAACAATATT GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA 65 AGTGAACCAG GGCATTCACC GTTTATATTG GCTGTGCATT GAATTGGATG ACATTTTCCA 8223 || | | || | |||||||| ||||||||| || ||||| | |||||| || ||||||||| AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 125 GGGCCAGGCT TAGTTGGGCC AAAAGACATA GGGATGTTGA ATCCATCAAT AACAGAAATA 8163 | ||| | | |||||| | ||||| ||| || || || | ||||||| | | |||||| CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 185 TCCCAAAAAT CTAGGTTACC AAACTGGTTC AAAGCGTATT CAGCTAAGGT GTTTGGTGGT 8103 |||||||||| ||| ||| | |||||||| | || ||||| | | |||| ||| |||||| ||| TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT 245 TTACCCCATC CTTTGCAATC CAGGACTCCA CCACAATCAC CAGTCTGGCA CCAACCTCTT 8043 || ||||||| | | || | | ||||||| |||||||||| ||||||| || |||||| TTGCCCCATC CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG 305 CCAGCACCAT CAAAGTTGCA ATTAGTACGA CCCCAAATAC GTGCCATTTT AGTGCCAGGT 7983 || ||| ||| ||||||||| | ||||||| ||||| |||| ||||||| || ||| || CCTGCAGCAT TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC 365 GGGGCCCAAA ACCACCAACT CTGACCTCTC TCGAGACGTC GACCACCTCC TACGGGGACC 7923 || || | ||| | || |||| | |||||||| ||||||| || || || | GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC 425 GCTGCCGCCC AAACGGTGTA GGGGCAGTTG TTATGGACCT CAAATACACC GGAACCATAA 7863 | |||||||| |||||||||| || |||||| || | |||| | ||| | || | ||||| GATGCCGCCC AAACGGTGTA TGGACAGTTG TTGCGTACCT C-AAT--AGT GGCAGCATAA 482 GTGTAAGTCA CAAAGGCAAG GAGAAAAAAC ACTAAACAAG TTG 7820 || ||||||| || | ||| || || | || ||| ||| || GTATAAGTCA CACAAAGAAG GAAGAAGAGA ACAAAAGAAG ATG 525 hqPGS_C08HBa0235H18.1-_SGN-E208900- (8342 7820) ******************************************************************************** EST sequence 157 -strand 207 n (File: SGN-E303218-) 1 TCAAAGTTGC GTTTAGTACG ACCCCAAATA CGTGCCATTT TAGTGCCAGG TGGGGCCCAT 61 AGCCACCATC TCTGACCTCT CTCGAGAAGT CGACCACCTC CTACGGGGAC CGCTGCCGCC 121 CAAACGGTGT AGGGGCAGTT GTTATGGACC TCAAATACAC CGGAACCATA AGTGTAAGTC 181 ACAAAGGCAA GGAGAAAAAA CACTAAA Predicted gene structure (within gDNA segment 8751 to 7227): Exon 1 8033 7827 ( 207 n); cDNA 1 207 ( 207 n); score: 0.971 MATCH C08HBa0235H18.1- SGN-E303218- 0.971 207 1.000 C PGS_C08HBa0235H18.1-_SGN-E303218- (8033 7827) Alignment (genomic DNA sequence = upper lines): TCAAAGTTGC AATTAGTACG ACCCCAAATA CGTGCCATTT TAGTGCCAGG TGGGGCCCAA 7974 |||||||||| |||||||| |||||||||| |||||||||| |||||||||| ||||||||| TCAAAGTTGC GTTTAGTACG ACCCCAAATA CGTGCCATTT TAGTGCCAGG TGGGGCCCAT 60 AACCACCAAC TCTGACCTCT CTCGAGACGT CGACCACCTC CTACGGGGAC CGCTGCCGCC 7914 | |||||| | |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| AGCCACCATC TCTGACCTCT CTCGAGAAGT CGACCACCTC CTACGGGGAC CGCTGCCGCC 120 CAAACGGTGT AGGGGCAGTT GTTATGGACC TCAAATACAC CGGAACCATA AGTGTAAGTC 7854 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAACGGTGT AGGGGCAGTT GTTATGGACC TCAAATACAC CGGAACCATA AGTGTAAGTC 180 ACAAAGGCAA GGAGAAAAAA CACTAAA 7827 |||||||||| |||||||||| ||||||| ACAAAGGCAA GGAGAAAAAA CACTAAA 207 hqPGS_C08HBa0235H18.1-_SGN-E303218- (8033 7827) ******************************************************************************** EST sequence 201 -strand 495 n (File: SGN-E286425-) 1 GAATGTTGTA CAAGGGTTGT TACATCCTCC AGGTACCCTA AGTGAACCAG GGCATTCACC 61 GTTTATATTG GCTGTGCATT GAATTGGATG ACATTTTCCA GGGCCAGGCT TAGTTGGGCC 121 AAAAGACATA GGGATGTTGA ATCCATCAAT AACAGAAATA TCCCAAAAAT CTAGGTTACC 181 AAACTGGTTC AAAGCGTATT CAGCTAAGGT GTTTGGTGGT TTACCCCATC CTTTGCAATC 241 CAGGACTCCA CCACAATCAC CAGTCTGGCA CCAACCTCTT CCAGCACCAT CAAAGTTGCA 301 ATTAGTACGA CCCCAAATAC GTGCCATTTT AGTGCCAGGT GGGGCCCAAA ACCACCAACT 361 CTGACCTCTC TCGAGACGTC GACCACCTCC TACGGGGACC GCTGCCGCCC AAACGGTGTA 421 GGGGCAGTTG TTATGGACCT CAAATACACC GGAACCATAA GTGTAAGTCA CAAAGGCAAG 481 GAGAAAAAAC ACTAA Predicted gene structure (within gDNA segment 8932 to 7228): Exon 1 8322 7828 ( 495 n); cDNA 1 495 ( 495 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E286425- 1.000 495 1.000 C PGS_C08HBa0235H18.1-_SGN-E286425- (8322 7828) Alignment (genomic DNA sequence = upper lines): GAATGTTGTA CAAGGGTTGT TACATCCTCC AGGTACCCTA AGTGAACCAG GGCATTCACC 8263 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAATGTTGTA CAAGGGTTGT TACATCCTCC AGGTACCCTA AGTGAACCAG GGCATTCACC 60 GTTTATATTG GCTGTGCATT GAATTGGATG ACATTTTCCA GGGCCAGGCT TAGTTGGGCC 8203 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTATATTG GCTGTGCATT GAATTGGATG ACATTTTCCA GGGCCAGGCT TAGTTGGGCC 120 AAAAGACATA GGGATGTTGA ATCCATCAAT AACAGAAATA TCCCAAAAAT CTAGGTTACC 8143 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAGACATA GGGATGTTGA ATCCATCAAT AACAGAAATA TCCCAAAAAT CTAGGTTACC 180 AAACTGGTTC AAAGCGTATT CAGCTAAGGT GTTTGGTGGT TTACCCCATC CTTTGCAATC 8083 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACTGGTTC AAAGCGTATT CAGCTAAGGT GTTTGGTGGT TTACCCCATC CTTTGCAATC 240 CAGGACTCCA CCACAATCAC CAGTCTGGCA CCAACCTCTT CCAGCACCAT CAAAGTTGCA 8023 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGGACTCCA CCACAATCAC CAGTCTGGCA CCAACCTCTT CCAGCACCAT CAAAGTTGCA 300 ATTAGTACGA CCCCAAATAC GTGCCATTTT AGTGCCAGGT GGGGCCCAAA ACCACCAACT 7963 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAGTACGA CCCCAAATAC GTGCCATTTT AGTGCCAGGT GGGGCCCAAA ACCACCAACT 360 CTGACCTCTC TCGAGACGTC GACCACCTCC TACGGGGACC GCTGCCGCCC AAACGGTGTA 7903 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGACCTCTC TCGAGACGTC GACCACCTCC TACGGGGACC GCTGCCGCCC AAACGGTGTA 420 GGGGCAGTTG TTATGGACCT CAAATACACC GGAACCATAA GTGTAAGTCA CAAAGGCAAG 7843 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGGCAGTTG TTATGGACCT CAAATACACC GGAACCATAA GTGTAAGTCA CAAAGGCAAG 480 GAGAAAAAAC ACTAA 7828 |||||||||| ||||| GAGAAAAAAC ACTAA 495 hqPGS_C08HBa0235H18.1-_SGN-E286425- (8322 7828) ******************************************************************************** EST sequence 260 -strand 499 n (File: SGN-E335641-) 1 GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC 61 TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT 121 CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 181 ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG 241 GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT 301 CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC 361 CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC GCCTATCGGA 421 GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT GGCAGCATAA 481 GTATAAGTCA CACAAAGAA Predicted gene structure (within gDNA segment 8982 to 3296): Exon 1 8342 7851 ( 492 n); cDNA 4 492 ( 489 n); score: 0.793 MATCH C08HBa0235H18.1- SGN-E335641- 0.793 492 0.986 C PGS_C08HBa0235H18.1-_SGN-E335641- (8342 7851) Alignment (genomic DNA sequence = upper lines): CAACAATATT GTTGTCCTCC GAATGTTGTA CAAGGGTTGT TACATCCTCC AGGTACCCTA 8283 |||||||||| |||||||||| || || ||| |||||||||| |||||||||| ||||||| || CAACAATATT GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA 63 AGTGAACCAG GGCATTCACC GTTTATATTG GCTGTGCATT GAATTGGATG ACATTTTCCA 8223 || | | || | |||||||| ||||||||| || ||||| | |||||| || ||||||||| AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 123 GGGCCAGGCT TAGTTGGGCC AAAAGACATA GGGATGTTGA ATCCATCAAT AACAGAAATA 8163 | ||| | | |||||| | ||||| ||| || || || | ||||||| | | |||||| CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 183 TCCCAAAAAT CTAGGTTACC AAACTGGTTC AAAGCGTATT CAGCTAAGGT GTTTGGTGGT 8103 |||||||||| ||| ||| | |||||||| | || ||||| | | |||| ||| |||||| ||| TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT 243 TTACCCCATC CTTTGCAATC CAGGACTCCA CCACAATCAC CAGTCTGGCA CCAACCTCTT 8043 || ||||||| | | || | | ||||||| |||||||||| ||||||| || |||||| TTGCCCCATC CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG 303 CCAGCACCAT CAAAGTTGCA ATTAGTACGA CCCCAAATAC GTGCCATTTT AGTGCCAGGT 7983 || ||| ||| ||||||||| | ||||||| ||||| |||| ||||||| || ||| || CCTGCAGCAT TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC 363 GGGGCCCAAA ACCACCAACT CTGACCTCTC TCGAGACGTC GACCACCTCC TACGGGGACC 7923 || || | ||| | || |||| | |||||||| ||||||| || || || | GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC 423 GCTGCCGCCC AAACGGTGTA GGGGCAGTTG TTATGGACCT CAAATACACC GGAACCATAA 7863 | |||||||| |||||||||| || |||||| || | |||| | ||| | || | ||||| GATGCCGCCC AAACGGTGTA TGGACAGTTG TTGCGTACCT C-AAT--AGT GGCAGCATAA 480 GTGTAAGTCA CA 7851 || ||||||| || GTATAAGTCA CA 492 hqPGS_C08HBa0235H18.1-_SGN-E335641- (8342 7851) ******************************************************************************** EST sequence 432 -strand 492 n (File: SGN-E209439-) 1 GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 61 CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 121 TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 181 AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 241 GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 301 TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 361 CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG 421 AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA 481 AGTATAAGTC AC Predicted gene structure (within gDNA segment 8992 to 3376): Exon 1 8342 7852 ( 491 n); cDNA 5 492 ( 488 n); score: 0.792 MATCH C08HBa0235H18.1- SGN-E209439- 0.792 491 0.998 C PGS_C08HBa0235H18.1-_SGN-E209439- (8342 7852) Alignment (genomic DNA sequence = upper lines): CAACAATATT GTTGTCCTCC GAATGTTGTA CAAGGGTTGT TACATCCTCC AGGTACCCTA 8283 |||||||||| |||||||||| || || ||| |||||||||| |||||||||| ||||||| || CAACAATATT GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA 64 AGTGAACCAG GGCATTCACC GTTTATATTG GCTGTGCATT GAATTGGATG ACATTTTCCA 8223 || | | || | |||||||| ||||||||| || ||||| | |||||| || ||||||||| AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 124 GGGCCAGGCT TAGTTGGGCC AAAAGACATA GGGATGTTGA ATCCATCAAT AACAGAAATA 8163 | ||| | | |||||| | ||||| ||| || || || | ||||||| | | |||||| CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 184 TCCCAAAAAT CTAGGTTACC AAACTGGTTC AAAGCGTATT CAGCTAAGGT GTTTGGTGGT 8103 |||||||||| ||| ||| | |||||||| | || ||||| | | |||| ||| |||||| ||| TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT 244 TTACCCCATC CTTTGCAATC CAGGACTCCA CCACAATCAC CAGTCTGGCA CCAACCTCTT 8043 || ||||||| | | || | | ||||||| |||||||||| ||||||| || |||||| TTGCCCCATC CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG 304 CCAGCACCAT CAAAGTTGCA ATTAGTACGA CCCCAAATAC GTGCCATTTT AGTGCCAGGT 7983 || ||| ||| ||||||||| | ||||||| ||||| |||| ||||||| || ||| || CCTGCAGCAT TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC 364 GGGGCCCAAA ACCACCAACT CTGACCTCTC TCGAGACGTC GACCACCTCC TACGGGGACC 7923 || || | ||| | || |||| | |||||||| ||||||| || || || | GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC 424 GCTGCCGCCC AAACGGTGTA GGGGCAGTTG TTATGGACCT CAAATACACC GGAACCATAA 7863 | |||||||| |||||||||| || |||||| || | |||| | ||| | || | ||||| GATGCCGCCC AAACGGTGTA TGGACAGTTG TTGCGTACCT C-AAT--AGT GGCAGCATAA 481 GTGTAAGTCA C 7852 || ||||||| | GTATAAGTCA C 492 hqPGS_C08HBa0235H18.1-_SGN-E209439- (8342 7852) ******************************************************************************** EST sequence 69 -strand 644 n (File: SGN-E305583-) 1 GAGTAGAGCC ATAAGGACAG AACATTATCT TGTAGTCTGT AGTCCAACTC TGACAAGTAA 61 AAGTACTAGT TGGATCGTCT TGAGGGTAAC TATAGGCATC AGGACATCTT TGTTTGAAAA 121 ATCTTGACAA TTCAGTAGGA CCACATGGAC CGTGATTACA ACAATATTGT TGTCCTCCGA 181 ATGTTGTACA AGGGTTGTTA CATCCTCCAG GTACCCTAAG TGAACCAGGG CATTCACCGT 241 TTATATTGGC TGTGCATTGA ATTGGATGAC ATTTTCCAGG GCCAGGCTTA GTTGGGCCAA 301 AAGACATAGG GATGTTGAAT CCATCAATAA CAGAAATATC CCAAAAATCT AGGTTACCAA 361 ACTGGTTCAA AGCGTATTCA GCTAAGGTGT TTGGTGGTTT ACCCCATCCT TTGCAATCCA 421 GGACTCCACC ACAATCACCA GTCTGGCACC AACCTCTTCC AGCACCATCA AAGTTGCAAT 481 TAGTACGACC CCAAATACGT GCCATTTTAG TGCCAGGTGG GGCCCAAAAC CACCAACTCT 541 GACCTCTCTC GAGACGTCGA CCACCTCCTA CGGGGACCGC TGCCGCCCAA ACGGTGTAGG 601 GGCAGTTGTT ATGGACCTCA AATACACCGG AACCATAAGT GTAA Predicted gene structure (within gDNA segment 9110 to 7257): Exon 1 8500 7857 ( 644 n); cDNA 1 644 ( 644 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E305583- 1.000 644 1.000 C PGS_C08HBa0235H18.1-_SGN-E305583- (8500 7857) Alignment (genomic DNA sequence = upper lines): GAGTAGAGCC ATAAGGACAG AACATTATCT TGTAGTCTGT AGTCCAACTC TGACAAGTAA 8441 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGTAGAGCC ATAAGGACAG AACATTATCT TGTAGTCTGT AGTCCAACTC TGACAAGTAA 60 AAGTACTAGT TGGATCGTCT TGAGGGTAAC TATAGGCATC AGGACATCTT TGTTTGAAAA 8381 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTACTAGT TGGATCGTCT TGAGGGTAAC TATAGGCATC AGGACATCTT TGTTTGAAAA 120 ATCTTGACAA TTCAGTAGGA CCACATGGAC CGTGATTACA ACAATATTGT TGTCCTCCGA 8321 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCTTGACAA TTCAGTAGGA CCACATGGAC CGTGATTACA ACAATATTGT TGTCCTCCGA 180 ATGTTGTACA AGGGTTGTTA CATCCTCCAG GTACCCTAAG TGAACCAGGG CATTCACCGT 8261 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGTTGTACA AGGGTTGTTA CATCCTCCAG GTACCCTAAG TGAACCAGGG CATTCACCGT 240 TTATATTGGC TGTGCATTGA ATTGGATGAC ATTTTCCAGG GCCAGGCTTA GTTGGGCCAA 8201 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTATATTGGC TGTGCATTGA ATTGGATGAC ATTTTCCAGG GCCAGGCTTA GTTGGGCCAA 300 AAGACATAGG GATGTTGAAT CCATCAATAA CAGAAATATC CCAAAAATCT AGGTTACCAA 8141 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGACATAGG GATGTTGAAT CCATCAATAA CAGAAATATC CCAAAAATCT AGGTTACCAA 360 ACTGGTTCAA AGCGTATTCA GCTAAGGTGT TTGGTGGTTT ACCCCATCCT TTGCAATCCA 8081 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTGGTTCAA AGCGTATTCA GCTAAGGTGT TTGGTGGTTT ACCCCATCCT TTGCAATCCA 420 GGACTCCACC ACAATCACCA GTCTGGCACC AACCTCTTCC AGCACCATCA AAGTTGCAAT 8021 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGACTCCACC ACAATCACCA GTCTGGCACC AACCTCTTCC AGCACCATCA AAGTTGCAAT 480 TAGTACGACC CCAAATACGT GCCATTTTAG TGCCAGGTGG GGCCCAAAAC CACCAACTCT 7961 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGTACGACC CCAAATACGT GCCATTTTAG TGCCAGGTGG GGCCCAAAAC CACCAACTCT 540 GACCTCTCTC GAGACGTCGA CCACCTCCTA CGGGGACCGC TGCCGCCCAA ACGGTGTAGG 7901 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCTCTCTC GAGACGTCGA CCACCTCCTA CGGGGACCGC TGCCGCCCAA ACGGTGTAGG 600 GGCAGTTGTT ATGGACCTCA AATACACCGG AACCATAAGT GTAA 7857 |||||||||| |||||||||| |||||||||| |||||||||| |||| GGCAGTTGTT ATGGACCTCA AATACACCGG AACCATAAGT GTAA 644 hqPGS_C08HBa0235H18.1-_SGN-E305583- (8500 7857) ******************************************************************************** EST sequence 240 -strand 713 n (File: SGN-E214128-) 1 ATTTAAATGA AGAAACTCAA ATCACTTGGC CACTTCATCA GTACTGCAGG GCATCTCCAA 61 GGGGAAATTG GATCAGCACN ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA 121 CCAGGGCAAG TAAATGTGCT TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT 181 CTTTTCTTGA AAAATTTGGA CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT 241 TGTTGTCCTC CAAACGTGGT ACAAGGGTTG TTACATCCTC CAGGTACCTT AAGGGCGCGA 301 GGACATTCAC CATTTATATT GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT 361 TTTGTTGGGG CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA 421 TCTAAGTTGC TAAACTGGTC CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT 481 CCGGTACACT GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA 541 TTAAAGTTGC AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG 601 ATGACCCATG TTTGGCCTCG ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC 661 CAAACGGTGT ATGGACAGTT GTTGCGTACC TCAATAGTGG CAGCATAAGT ATA Predicted gene structure (within gDNA segment 11262 to 3436): Exon 1 8492 7858 ( 635 n); cDNA 82 713 ( 632 n); score: 0.784 MATCH C08HBa0235H18.1- SGN-E214128- 0.784 635 0.891 C PGS_C08HBa0235H18.1-_SGN-E214128- (8492 7858) Alignment (genomic DNA sequence = upper lines): CCATAAGGAC AGAACATTAT CTTGTAGTCT GTAGTCCAAC TCTGACAAGT AAAAGTACTA 8433 |||| ||||| | || | | | | |||| | ||| | | || | ||||| ||| || || CCATTAGGAC AAAAGACAAC CCTATAGTTT GTACTACCAC CAGGGCAAGT AAATGTGCTT 141 GTTGGATCGT CTTGAGGGTA ACTATAGGCA TCAGGACATC TTTGTTTGAA AAATCTTGAC 8373 || ||||||| |||| ||||| ||||| ||| || ||||||| ||| ||||| |||| | ||| GTAGGATCGT CTTGTGGGTA GCTATAAGCA TCGGGACATC TTTTCTTGAA AAATTTGGAC 201 AATTCAGTAG GACCACATGG ACCGTGATTA CAACAATATT GTTGTCCTCC GAATGTTGTA 8313 || || |||| | |||||||| ||| || | |||||||||| |||||||||| || || ||| AACTCTGTAG GGCCACATGG ACCTTGGGTG CAACAATATT GTTGTCCTCC AAACGTGGTA 261 CAAGGGTTGT TACATCCTCC AGGTACCCTA AGTGAACCAG GGCATTCACC GTTTATATTG 8253 |||||||||| |||||||||| ||||||| || || | | || | |||||||| ||||||||| CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC ATTTATATTG 321 GCTGTGCATT GAATTGGATG ACATTTTCCA GGGCCAGGCT TAGTTGGGCC AAAAGACATA 8193 || ||||| | |||||| || ||||||||| | ||| | | |||||| | ||||| ||| GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC AAAAGTCATT 381 GGGATGTTGA ATCCATCAAT AACAGAAATA TCCCAAAAAT CTAGGTTACC AAACTGGTTC 8133 || || || | ||||||| | | |||||| |||||||||| ||| ||| | |||||||| | GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT AAACTGGTCC 441 AAAGCGTATT CAGCTAAGGT GTTTGGTGGT TTACCCCATC CTTTGCAATC CAGGACTCCA 8073 || ||||| | | |||| ||| |||||| ||| || ||||||| | | || | | ||||||| AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG TAAGACTCCA 501 CCACAATCAC CAGTCTGGCA CCAACCTCTT CCAGCACCAT CAAAGTTGCA ATTAGTACGA 8013 |||||||||| ||||||| || |||||| || ||| ||| ||||||||| | ||||||| CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA ACCAGTACGA 561 CCCCAAATAC GTGCCATTTT AGTGCCAGGT GGGGCCCAAA ACCACCAACT CTGACCTCTC 7953 ||||| |||| ||||||| || ||| || || || | ||| | || |||| CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT TTGGCCTCGA 621 TCGAGACGTC GACCACCTCC TACGGGGACC GCTGCCGCCC AAACGGTGTA GGGGCAGTTG 7893 | |||||||| ||||||| || || || | | |||||||| |||||||||| || |||||| TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA TGGACAGTTG 681 TTATGGACCT CAAATACACC GGAACCATAA GTGTA 7858 || | |||| | ||| | || | ||||| || || TTGCGTACCT C-AAT--AGT GGCAGCATAA GTATA 713 hqPGS_C08HBa0235H18.1-_SGN-E214128- (8492 7858) ******************************************************************************** EST sequence 59 -strand 511 n (File: SGN-E306399-) 1 TCAGTAGGAC CACATGGACC GTGATTACAA CAATATTGTT GTCCTCCGAA TGTTGTACAA 61 GGGTTGTTAC ATCCTCCAGG TACCCTAAGT GAACCAGGGC ATTCACCGTT TATATTGGCT 121 GTGCATTGAA TTGGATGACA TTTTCCAGGG CCAGGCTTAG TTGGGCCAAA AGACATAGGG 181 ATGTTGAATC CATCAATAAC AGAAATATCC CAAAAATCTA GGTTACCAAA CTGGTTCAAA 241 GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT TGCAATCCAG GACTCCACCA 301 CAATCACCAG TCTGGCACCA ACCTCTTCCA GCACCATCAA AGTTGCAATT AGTACGACCC 361 CAAATACGTG CCATTTTAGT GCCAGGTGGG GCCCAAAACC ACCAACTCTG ACCTCTCTCG 421 AGACGTCGAC CACCTCCTAC GGGGACCGCT GCCGCCCAAA CGGTGTAGGG GCAGTTGTTA 481 TGGACCTCAA ATACACCGGA ACCATAAGTG T Predicted gene structure (within gDNA segment 8979 to 7259): Exon 1 8369 7859 ( 511 n); cDNA 1 511 ( 511 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E306399- 1.000 511 1.000 C PGS_C08HBa0235H18.1-_SGN-E306399- (8369 7859) Alignment (genomic DNA sequence = upper lines): TCAGTAGGAC CACATGGACC GTGATTACAA CAATATTGTT GTCCTCCGAA TGTTGTACAA 8310 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAGTAGGAC CACATGGACC GTGATTACAA CAATATTGTT GTCCTCCGAA TGTTGTACAA 60 GGGTTGTTAC ATCCTCCAGG TACCCTAAGT GAACCAGGGC ATTCACCGTT TATATTGGCT 8250 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGTTGTTAC ATCCTCCAGG TACCCTAAGT GAACCAGGGC ATTCACCGTT TATATTGGCT 120 GTGCATTGAA TTGGATGACA TTTTCCAGGG CCAGGCTTAG TTGGGCCAAA AGACATAGGG 8190 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGCATTGAA TTGGATGACA TTTTCCAGGG CCAGGCTTAG TTGGGCCAAA AGACATAGGG 180 ATGTTGAATC CATCAATAAC AGAAATATCC CAAAAATCTA GGTTACCAAA CTGGTTCAAA 8130 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGTTGAATC CATCAATAAC AGAAATATCC CAAAAATCTA GGTTACCAAA CTGGTTCAAA 240 GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT TGCAATCCAG GACTCCACCA 8070 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT TGCAATCCAG GACTCCACCA 300 CAATCACCAG TCTGGCACCA ACCTCTTCCA GCACCATCAA AGTTGCAATT AGTACGACCC 8010 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAATCACCAG TCTGGCACCA ACCTCTTCCA GCACCATCAA AGTTGCAATT AGTACGACCC 360 CAAATACGTG CCATTTTAGT GCCAGGTGGG GCCCAAAACC ACCAACTCTG ACCTCTCTCG 7950 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAATACGTG CCATTTTAGT GCCAGGTGGG GCCCAAAACC ACCAACTCTG ACCTCTCTCG 420 AGACGTCGAC CACCTCCTAC GGGGACCGCT GCCGCCCAAA CGGTGTAGGG GCAGTTGTTA 7890 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGACGTCGAC CACCTCCTAC GGGGACCGCT GCCGCCCAAA CGGTGTAGGG GCAGTTGTTA 480 TGGACCTCAA ATACACCGGA ACCATAAGTG T 7859 |||||||||| |||||||||| |||||||||| | TGGACCTCAA ATACACCGGA ACCATAAGTG T 511 hqPGS_C08HBa0235H18.1-_SGN-E306399- (8369 7859) ******************************************************************************** EST sequence 403 -strand 481 n (File: SGN-E311822-) 1 GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 61 CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 121 TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 181 AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 241 GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 301 TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 361 CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG 421 AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA 481 A Predicted gene structure (within gDNA segment 8992 to 3486): Exon 1 8342 7863 ( 480 n); cDNA 5 481 ( 477 n); score: 0.790 MATCH C08HBa0235H18.1- SGN-E311822- 0.790 480 0.998 C PGS_C08HBa0235H18.1-_SGN-E311822- (8342 7863) Alignment (genomic DNA sequence = upper lines): CAACAATATT GTTGTCCTCC GAATGTTGTA CAAGGGTTGT TACATCCTCC AGGTACCCTA 8283 |||||||||| |||||||||| || || ||| |||||||||| |||||||||| ||||||| || CAACAATATT GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA 64 AGTGAACCAG GGCATTCACC GTTTATATTG GCTGTGCATT GAATTGGATG ACATTTTCCA 8223 || | | || | |||||||| ||||||||| || ||||| | |||||| || ||||||||| AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 124 GGGCCAGGCT TAGTTGGGCC AAAAGACATA GGGATGTTGA ATCCATCAAT AACAGAAATA 8163 | ||| | | |||||| | ||||| ||| || || || | ||||||| | | |||||| CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 184 TCCCAAAAAT CTAGGTTACC AAACTGGTTC AAAGCGTATT CAGCTAAGGT GTTTGGTGGT 8103 |||||||||| ||| ||| | |||||||| | || ||||| | | |||| ||| |||||| ||| TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT 244 TTACCCCATC CTTTGCAATC CAGGACTCCA CCACAATCAC CAGTCTGGCA CCAACCTCTT 8043 || ||||||| | | || | | ||||||| |||||||||| ||||||| || |||||| TTGCCCCATC CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG 304 CCAGCACCAT CAAAGTTGCA ATTAGTACGA CCCCAAATAC GTGCCATTTT AGTGCCAGGT 7983 || ||| ||| ||||||||| | ||||||| ||||| |||| ||||||| || ||| || CCTGCAGCAT TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC 364 GGGGCCCAAA ACCACCAACT CTGACCTCTC TCGAGACGTC GACCACCTCC TACGGGGACC 7923 || || | ||| | || |||| | |||||||| ||||||| || || || | GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC 424 GCTGCCGCCC AAACGGTGTA GGGGCAGTTG TTATGGACCT CAAATACACC GGAACCATAA 7863 | |||||||| |||||||||| || |||||| || | |||| | ||| | || | ||||| GATGCCGCCC AAACGGTGTA TGGACAGTTG TTGCGTACCT C-AAT--AGT GGCAGCATAA 481 hqPGS_C08HBa0235H18.1-_SGN-E311822- (8342 7863) ******************************************************************************** EST sequence 280 -strand 748 n (File: SGN-E542649-) 1 GTAATGAACA AAACTCAACC ATTTTGAACA AGAAAGAGGT GGCTACACTC ATGATGAATC 61 TACTTATTAA GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC 121 ATTGTGAGTA GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA 181 AGTAAAAGTA CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT 241 GAAAAATCTT GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC 301 TCCGAATGTT GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC 361 ACCGTTTATA TTGGCTGTGC ATTGAATTGG ATGACATTTT CCAGGGCCAG GCTTAGTTGG 421 GCCAAAAGAC ATAGGGATGT TGAATCCATC AATAACAGAA ATATCCCAAA AATCTAGGTT 481 ACCAAACTGG TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA 541 ATCCAGGACT CCACCACAAT CACCAGTCTG GCACCAACCT CTTCCAGCAC CATCAAAGTT 601 GCAATTAGTA CGACCCCAAA TACGTGCCAT TTTAGTGCCA GGTGGGGCCC AAAACCACCA 661 ACTCTGACCT CTCTCGAGAC GTCGACCACC TCCTACGGGG ACCGCTGCCG CCCAAACGGT 721 GTAGGGGCAG TTGTTATGGA CCTCAAAT Predicted gene structure (within gDNA segment 9235 to 7278): Exon 1 8625 7878 ( 748 n); cDNA 1 748 ( 748 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E542649- 1.000 748 1.000 C PGS_C08HBa0235H18.1-_SGN-E542649- (8625 7878) Alignment (genomic DNA sequence = upper lines): GTAATGAACA AAACTCAACC ATTTTGAACA AGAAAGAGGT GGCTACACTC ATGATGAATC 8566 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTAATGAACA AAACTCAACC ATTTTGAACA AGAAAGAGGT GGCTACACTC ATGATGAATC 60 TACTTATTAA GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC 8506 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACTTATTAA GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC 120 ATTGTGAGTA GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA 8446 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGTGAGTA GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA 180 AGTAAAAGTA CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT 8386 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTAAAAGTA CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT 240 GAAAAATCTT GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC 8326 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAAAATCTT GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC 300 TCCGAATGTT GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC 8266 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCGAATGTT GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC 360 ACCGTTTATA TTGGCTGTGC ATTGAATTGG ATGACATTTT CCAGGGCCAG GCTTAGTTGG 8206 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCGTTTATA TTGGCTGTGC ATTGAATTGG ATGACATTTT CCAGGGCCAG GCTTAGTTGG 420 GCCAAAAGAC ATAGGGATGT TGAATCCATC AATAACAGAA ATATCCCAAA AATCTAGGTT 8146 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCAAAAGAC ATAGGGATGT TGAATCCATC AATAACAGAA ATATCCCAAA AATCTAGGTT 480 ACCAAACTGG TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA 8086 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAAACTGG TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA 540 ATCCAGGACT CCACCACAAT CACCAGTCTG GCACCAACCT CTTCCAGCAC CATCAAAGTT 8026 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCCAGGACT CCACCACAAT CACCAGTCTG GCACCAACCT CTTCCAGCAC CATCAAAGTT 600 GCAATTAGTA CGACCCCAAA TACGTGCCAT TTTAGTGCCA GGTGGGGCCC AAAACCACCA 7966 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAATTAGTA CGACCCCAAA TACGTGCCAT TTTAGTGCCA GGTGGGGCCC AAAACCACCA 660 ACTCTGACCT CTCTCGAGAC GTCGACCACC TCCTACGGGG ACCGCTGCCG CCCAAACGGT 7906 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTCTGACCT CTCTCGAGAC GTCGACCACC TCCTACGGGG ACCGCTGCCG CCCAAACGGT 720 GTAGGGGCAG TTGTTATGGA CCTCAAAT 7878 |||||||||| |||||||||| |||||||| GTAGGGGCAG TTGTTATGGA CCTCAAAT 748 hqPGS_C08HBa0235H18.1-_SGN-E542649- (8625 7878) ******************************************************************************** EST sequence 422 -strand 581 n (File: SGN-E301650-) 1 GTCCAACTCT GACAAGTAAA AGTACTAGTT GGATCGTCTT GAGGGTAACT ATAGGCATCA 61 GGACATCTTT GTTTGAAAAA TCTTGACAAT TCAGTAGGAC CACATGGACC GTGATTACAA 121 CAATATTGTT GTCCTCCGAA TGTTGTACAA GGGTTGTTAC ATCCTCCAGG TACCCTAAGT 181 GAACCAGGGC ATTCACCGTT TATATTGGCT GTGCATTGAA TTGGATGACA TTTTCCAGGG 241 CCAGGCTTAG TTGGGCCAAA AGACATAGGG ATGTTGAATC CATCAATAAC AGAAATATCC 301 CAAAAATCTA GGTTACCAAA CTGGTTCAAA GCGTATTCAG CTAAGGTGTT TGGTGGTTTA 361 CCCCATCCTT TGCAATCCAG GACTCCACCA CAATCACCAG TCTGGCACCA ACCTCTTCCA 421 GCACCATCAA AGTTGCAATT AGTACGACCC CAAATACGTG CCATTTTAGT GCCAGGTGGG 481 GCCCAAAACC ACCAACTCTG ACCTCTCTCG AGACGTCGAC CACCTCCTAC GCGGACCGCT 541 GCCGCCCAAA CGGTGTAGGG GCAGTTGTTA TGGACCTCAA A Predicted gene structure (within gDNA segment 9069 to 7279): Exon 1 8459 7879 ( 581 n); cDNA 1 581 ( 581 n); score: 0.998 MATCH C08HBa0235H18.1- SGN-E301650- 0.998 581 1.000 C PGS_C08HBa0235H18.1-_SGN-E301650- (8459 7879) Alignment (genomic DNA sequence = upper lines): GTCCAACTCT GACAAGTAAA AGTACTAGTT GGATCGTCTT GAGGGTAACT ATAGGCATCA 8400 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCCAACTCT GACAAGTAAA AGTACTAGTT GGATCGTCTT GAGGGTAACT ATAGGCATCA 60 GGACATCTTT GTTTGAAAAA TCTTGACAAT TCAGTAGGAC CACATGGACC GTGATTACAA 8340 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGACATCTTT GTTTGAAAAA TCTTGACAAT TCAGTAGGAC CACATGGACC GTGATTACAA 120 CAATATTGTT GTCCTCCGAA TGTTGTACAA GGGTTGTTAC ATCCTCCAGG TACCCTAAGT 8280 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAATATTGTT GTCCTCCGAA TGTTGTACAA GGGTTGTTAC ATCCTCCAGG TACCCTAAGT 180 GAACCAGGGC ATTCACCGTT TATATTGGCT GTGCATTGAA TTGGATGACA TTTTCCAGGG 8220 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAACCAGGGC ATTCACCGTT TATATTGGCT GTGCATTGAA TTGGATGACA TTTTCCAGGG 240 CCAGGCTTAG TTGGGCCAAA AGACATAGGG ATGTTGAATC CATCAATAAC AGAAATATCC 8160 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAGGCTTAG TTGGGCCAAA AGACATAGGG ATGTTGAATC CATCAATAAC AGAAATATCC 300 CAAAAATCTA GGTTACCAAA CTGGTTCAAA GCGTATTCAG CTAAGGTGTT TGGTGGTTTA 8100 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAAATCTA GGTTACCAAA CTGGTTCAAA GCGTATTCAG CTAAGGTGTT TGGTGGTTTA 360 CCCCATCCTT TGCAATCCAG GACTCCACCA CAATCACCAG TCTGGCACCA ACCTCTTCCA 8040 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCCATCCTT TGCAATCCAG GACTCCACCA CAATCACCAG TCTGGCACCA ACCTCTTCCA 420 GCACCATCAA AGTTGCAATT AGTACGACCC CAAATACGTG CCATTTTAGT GCCAGGTGGG 7980 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCACCATCAA AGTTGCAATT AGTACGACCC CAAATACGTG CCATTTTAGT GCCAGGTGGG 480 GCCCAAAACC ACCAACTCTG ACCTCTCTCG AGACGTCGAC CACCTCCTAC GGGGACCGCT 7920 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| GCCCAAAACC ACCAACTCTG ACCTCTCTCG AGACGTCGAC CACCTCCTAC GCGGACCGCT 540 GCCGCCCAAA CGGTGTAGGG GCAGTTGTTA TGGACCTCAA A 7879 |||||||||| |||||||||| |||||||||| |||||||||| | GCCGCCCAAA CGGTGTAGGG GCAGTTGTTA TGGACCTCAA A 581 hqPGS_C08HBa0235H18.1-_SGN-E301650- (8459 7879) ******************************************************************************** EST sequence 22 -strand 530 n (File: SGN-E336261-) 1 ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 61 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 121 TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 181 TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 241 AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 301 TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT 361 ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT 421 TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT 481 CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA Predicted gene structure (within gDNA segment 9622 to 3626): Exon 1 8409 7880 ( 530 n); cDNA 1 530 ( 530 n); score: 0.798 MATCH C08HBa0235H18.1- SGN-E336261- 0.798 530 1.000 C PGS_C08HBa0235H18.1-_SGN-E336261- (8409 7880) Alignment (genomic DNA sequence = upper lines): ATAGGCATCA GGACATCTTT GTTTGAAAAA TCTTGACAAT TCAGTAGGAC CACATGGACC 8350 ||| ||||| |||||||||| |||||||| | | ||||| || ||||| | |||||||||| ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 60 GTGATTACAA CAATATTGTT GTCCTCCGAA TGTTGTACAA GGGTTGTTAC ATCCTCCAGG 8290 || | ||| |||||||||| ||||||| || || |||||| |||||||||| |||||||||| TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 120 TACCCTAAGT GAACCAGGGC ATTCACCGTT TATATTGGCT GTGCATTGAA TTGGATGACA 8230 |||| |||| | | ||| | ||||||| || ||||||||| ||||| |||| ||| ||||| TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 180 TTTTCCAGGG CCAGGCTTAG TTGGGCCAAA AGACATAGGG ATGTTGAATC CATCAATAAC 8170 |||||| | ||| || | ||||| |||| || ||| || || || |||| |||| | | TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 240 AGAAATATCC CAAAAATCTA GGTTACCAAA CTGGTTCAAA GCGTATTCAG CTAAGGTGTT 8110 |||||| ||| |||||||||| ||| | ||| ||||| ||| ||||| || | ||| |||||| AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 300 TGGTGGTTTA CCCCATCCTT TGCAATCCAG GACTCCACCA CAATCACCAG TCTGGCACCA 8050 ||| ||||| |||||||| | || | | |||||||||| |||||||||| |||| || TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT 360 ACCTCTTCCA GCACCATCAA AGTTGCAATT AGTACGACCC CAAATACGTG CCATTTTAGT 7990 |||||| || ||| ||| || |||||||| |||||||||| || ||||||| |||| ||||| ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT 420 GCCAGGTGGG GCCCAAAACC ACCAACTCTG ACCTCTCTCG AGACGTCGAC CACCTCCTAC 7930 || || || | ||| | || |||| | | |||||||||| |||| |||| TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT 480 GGGGACCGCT GCCGCCCAAA CGGTGTAGGG GCAGTTGTTA TGGACCTCAA 7880 || || | |||||||||| ||||||| || |||||||| | ||||||| CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA 530 hqPGS_C08HBa0235H18.1-_SGN-E336261- (8409 7880) ******************************************************************************** EST sequence 117 -strand 716 n (File: SGN-E212860-) 1 AAAAATTACC AAAAAAAGAG ATGGGCTCAA CTCAAGATTT CTACTTAATT AAGCCACTCA 61 AAGAGTATTT GTAGGAATCT CCAATGGGAA ATTTGTTGTT TCATTGTGAG TAGAGCCATA 121 AGGACAAAAC ATAACCTNGT AGTCTGTAGT CCAACTCTGA CAAGTAAAAG TACTTGTTGG 181 ATCGTCTTGA GGATAACTAT AGGCATCGGG ACATCTTTGT TTGAAAAATC TTGACAAATC 241 GGTAGGACCA CATGGACCTT GAGTGCAACA ATATTGTTGT CCTCCGAATG TAGTACAAGG 301 GTTGTTACAT CCTCCGGGTA CCCTAAGTGA ACCAGGGCAT TCACCGTTTA TATTAGCAAC 361 ACATTGAATT GGATGACATT TTCCCGGCCC AGGGTTAGTT GGGCCGAAAG ACATAGGGAT 421 GTTGAATCCA TCAATAACAG AAATGTCCCA GAAATCTAAG TTGCTAAATT GATTCAAAGC 481 GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG CATTCCAAGA CTCCACCACA 541 ATCACCGGTC TGGCACCAAC CTCTACCAGC ACCATCAAAA TTGCAATTAG TACGACCCCA 601 AATACGTGCC ATTTTGGTGC CCGGTGGAGC CCAAAACCAC CAACTTTGAC CTCTCTCGAG 661 ACGTCGGCCA CCTCCTACGG GAGTCGCCGC TGCCCATACG GTGTATGGAC AGTTGT Predicted gene structure (within gDNA segment 9901 to 6842): Exon 1 8560 7892 ( 669 n); cDNA 48 716 ( 669 n); score: 0.921 MATCH C08HBa0235H18.1- SGN-E212860- 0.921 669 0.934 C PGS_C08HBa0235H18.1-_SGN-E212860- (8560 7892) Alignment (genomic DNA sequence = upper lines): ATTAAGCAAC TTCAAGAGTA CTTGTAGGCA TCTCCAATGG GAAATTTGTT GTTTCATTGT 8501 ||||||| || | ||||||| ||||||| | |||||||||| |||||||||| |||||||||| ATTAAGCCAC TCAAAGAGTA TTTGTAGGAA TCTCCAATGG GAAATTTGTT GTTTCATTGT 107 GAGTAGAGCC ATAAGGACAG AACATTATCT TGTAGTCTGT AGTCCAACTC TGACAAGTAA 8441 |||||||||| ||||||||| ||||| | || ||||||||| |||||||||| |||||||||| GAGTAGAGCC ATAAGGACAA AACATAACCT NGTAGTCTGT AGTCCAACTC TGACAAGTAA 167 AAGTACTAGT TGGATCGTCT TGAGGGTAAC TATAGGCATC AGGACATCTT TGTTTGAAAA 8381 ||||||| || |||||||||| ||||| |||| |||||||||| ||||||||| |||||||||| AAGTACTTGT TGGATCGTCT TGAGGATAAC TATAGGCATC GGGACATCTT TGTTTGAAAA 227 ATCTTGACAA TTCAGTAGGA CCACATGGAC CGTGATTACA ACAATATTGT TGTCCTCCGA 8321 |||||||||| || |||||| |||||||||| | ||| | || |||||||||| |||||||||| ATCTTGACAA ATCGGTAGGA CCACATGGAC CTTGAGTGCA ACAATATTGT TGTCCTCCGA 287 ATGTTGTACA AGGGTTGTTA CATCCTCCAG GTACCCTAAG TGAACCAGGG CATTCACCGT 8261 |||| ||||| |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| ATGTAGTACA AGGGTTGTTA CATCCTCCGG GTACCCTAAG TGAACCAGGG CATTCACCGT 347 TTATATTGGC TGTGCATTGA ATTGGATGAC ATTTTCCAGG GCCAGGCTTA GTTGGGCCAA 8201 ||||||| || |||||| |||||||||| ||||||| || ||||| ||| |||||||| | TTATATTAGC AACACATTGA ATTGGATGAC ATTTTCCCGG CCCAGGGTTA GTTGGGCCGA 407 AAGACATAGG GATGTTGAAT CCATCAATAA CAGAAATATC CCAAAAATCT AGGTTACCAA 8141 |||||||||| |||||||||| |||||||||| ||||||| || ||| |||||| | ||| | || AAGACATAGG GATGTTGAAT CCATCAATAA CAGAAATGTC CCAGAAATCT AAGTTGCTAA 467 ACTGGTTCAA AGCGTATTCA GCTAAGGTGT TTGGTGGTTT ACCCCATCCT TTGCAATCCA 8081 | || ||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| ATTGATTCAA AGCGTATTCA GCTAAGGTGT TTGGTGGTTT ACCCCATCCT TTGCATTCCA 527 GGACTCCACC ACAATCACCA GTCTGGCACC AACCTCTTCC AGCACCATCA AAGTTGCAAT 8021 ||||||||| ||||||||| |||||||||| ||||||| || |||||||||| || ||||||| AGACTCCACC ACAATCACCG GTCTGGCACC AACCTCTACC AGCACCATCA AAATTGCAAT 587 TAGTACGACC CCAAATACGT GCCATTTTAG TGCCAGGTGG GGCCCAAAAC CACCAACTCT 7961 |||||||||| |||||||||| |||||||| | |||| ||||| ||||||||| |||||||| | TAGTACGACC CCAAATACGT GCCATTTTGG TGCCCGGTGG AGCCCAAAAC CACCAACTTT 647 GACCTCTCTC GAGACGTCGA CCACCTCCTA CGGGGACCGC TGCCGCCCAA ACGGTGTAGG 7901 |||||||||| ||||||||| |||||||||| |||| ||| || ||||| |||||||| | GACCTCTCTC GAGACGTCGG CCACCTCCTA CGGGAGTCGC CGCTGCCCAT ACGGTGTATG 707 GGCAGTTGT 7892 | ||||||| GACAGTTGT 716 hqPGS_C08HBa0235H18.1-_SGN-E212860- (8560 7892) ******************************************************************************** EST sequence 212 -strand 455 n (File: SGN-E253792-) 1 TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 61 ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 121 TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 181 GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 241 GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 301 CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 361 CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 421 GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTT Predicted gene structure (within gDNA segment 9012 to 3766): Exon 1 8348 7894 ( 455 n); cDNA 1 455 ( 455 n); score: 0.793 MATCH C08HBa0235H18.1- SGN-E253792- 0.793 455 1.000 C PGS_C08HBa0235H18.1-_SGN-E253792- (8348 7894) Alignment (genomic DNA sequence = upper lines): TGATTACAAC AATATTGTTG TCCTCCGAAT GTTGTACAAG GGTTGTTACA TCCTCCAGGT 8289 || | |||| |||||||||| |||||| || || ||||||| |||||||||| |||||||||| TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 60 ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTGGCTG TGCATTGAAT TGGATGACAT 8229 ||| |||| | | ||| || |||||| ||| |||||||| | |||| ||||| || |||||| ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 120 TTTCCAGGGC CAGGCTTAGT TGGGCCAAAA GACATAGGGA TGTTGAATCC ATCAATAACA 8169 ||||| | ||| || || |||| ||||| | ||| || | | || ||||| ||| | | | TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 180 GAAATATCCC AAAAATCTAG GTTACCAAAC TGGTTCAAAG CGTATTCAGC TAAGGTGTTT 8109 ||||| |||| ||||||||| ||| | |||| |||| ||| | |||| || || || ||||||| GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 240 GGTGGTTTAC CCCATCCTTT GCAATCCAGG ACTCCACCAC AATCACCAGT CTGGCACCAA 8049 || ||||| | ||||||| | || | | | |||||||||| |||||||||| ||| || | GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 300 CCTCTTCCAG CACCATCAAA GTTGCAATTA GTACGACCCC AAATACGTGC CATTTTAGTG 7989 ||||| || | || ||| ||| ||||||| | |||||||||| | |||||||| ||| ||||| CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 360 CCAGGTGGGG CCCAAAACCA CCAACTCTGA CCTCTCTCGA GACGTCGACC ACCTCCTACG 7929 || || | | | ||| | || |||| | || |||||||||| ||| |||| CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 420 GGGACCGCTG CCGCCCAAAC GGTGTAGGGG CAGTT 7894 || || || |||||||||| |||||| || ||||| GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTT 455 hqPGS_C08HBa0235H18.1-_SGN-E253792- (8348 7894) ******************************************************************************** EST sequence 359 -strand 441 n (File: SGN-E208167-) 1 GAGTGCAACA ATATTGTTGT CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA 61 CCCTAAGTGA ACCAGGGCAT TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT 121 TTCCCGGCCC AGGGTTAGTT GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG 181 AAATGTCCCA GAAATCTAAG TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG 241 GTGGTTTACC CCATCCTTTG CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC 301 CTCTACCAGC ACCATCAAAA TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC 361 CCGGTGGAGC CCAAAACCAC CAACTTTGAC CTCTCTCGAG ACGTCGGCCA CCTCCTACGG 421 GAGTCGCCGC TGCCCATACG G Predicted gene structure (within gDNA segment 9002 to 6992): Exon 1 8347 7907 ( 441 n); cDNA 1 441 ( 441 n); score: 0.918 MATCH C08HBa0235H18.1- SGN-E208167- 0.918 441 1.000 C PGS_C08HBa0235H18.1-_SGN-E208167- (8347 7907) Alignment (genomic DNA sequence = upper lines): GATTACAACA ATATTGTTGT CCTCCGAATG TTGTACAAGG GTTGTTACAT CCTCCAGGTA 8288 || | ||||| |||||||||| |||||||||| | |||||||| |||||||||| ||||| |||| GAGTGCAACA ATATTGTTGT CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA 60 CCCTAAGTGA ACCAGGGCAT TCACCGTTTA TATTGGCTGT GCATTGAATT GGATGACATT 8228 |||||||||| |||||||||| |||||||||| |||| || ||||||||| |||||||||| CCCTAAGTGA ACCAGGGCAT TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT 120 TTCCAGGGCC AGGCTTAGTT GGGCCAAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG 8168 |||| || || ||| |||||| ||||| |||| |||||||||| |||||||||| |||||||||| TTCCCGGCCC AGGGTTAGTT GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG 180 AAATATCCCA AAAATCTAGG TTACCAAACT GGTTCAAAGC GTATTCAGCT AAGGTGTTTG 8108 |||| ||||| ||||||| | || | ||| | | |||||||| |||||||||| |||||||||| AAATGTCCCA GAAATCTAAG TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG 240 GTGGTTTACC CCATCCTTTG CAATCCAGGA CTCCACCACA ATCACCAGTC TGGCACCAAC 8048 |||||||||| |||||||||| || |||| || |||||||||| |||||| ||| |||||||||| GTGGTTTACC CCATCCTTTG CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC 300 CTCTTCCAGC ACCATCAAAG TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTAGTGC 7988 |||| ||||| ||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CTCTACCAGC ACCATCAAAA TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC 360 CAGGTGGGGC CCAAAACCAC CAACTCTGAC CTCTCTCGAG ACGTCGACCA CCTCCTACGG 7928 | ||||| || |||||||||| ||||| |||| |||||||||| |||||| ||| |||||||||| CCGGTGGAGC CCAAAACCAC CAACTTTGAC CTCTCTCGAG ACGTCGGCCA CCTCCTACGG 420 GGACCGCTGC CGCCCAAACG G 7907 | ||| || ||||| ||| | GAGTCGCCGC TGCCCATACG G 441 hqPGS_C08HBa0235H18.1-_SGN-E208167- (8347 7907) ******************************************************************************** EST sequence 67 -strand 336 n (File: SGN-E306515-) 1 TTTATATTAG CAACACATTG AATTGGATGA CATTTTCCCG GCCCAGGGTT AGTTGGGCCG 61 AAAGACATAG GGATGTTGAA TCCATCAATA ACAGAAATGT CCCAGAAATC TAAGTTGCTA 121 AATTGATTCA AAGCGTATTC AGCTAAGGTG TTTGGTGGTT TACCCCATCC TTTGCATTCC 181 AAGACTCCAC CACAATCACC GGTCTGGCAC CAACCTCTAC CAGCACCATC AAAATTGCAA 241 TTAGTACGAC CCCAAATACG TGCCATTTTG GTGCCCGGTG GAGCCCAAAA CCACCAACTT 301 TGACCTCTCT CGAGACGTCG GCCACCTCCT ACGGGA Predicted gene structure (within gDNA segment 9411 to 7182): Exon 1 8261 7927 ( 335 n); cDNA 1 335 ( 335 n); score: 0.922 MATCH C08HBa0235H18.1- SGN-E306515- 0.922 335 0.997 C PGS_C08HBa0235H18.1-_SGN-E306515- (8261 7927) Alignment (genomic DNA sequence = upper lines): TTTATATTGG CTGTGCATTG AATTGGATGA CATTTTCCAG GGCCAGGCTT AGTTGGGCCA 8202 |||||||| | | ||||| |||||||||| |||||||| | | ||||| || ||||||||| TTTATATTAG CAACACATTG AATTGGATGA CATTTTCCCG GCCCAGGGTT AGTTGGGCCG 60 AAAGACATAG GGATGTTGAA TCCATCAATA ACAGAAATAT CCCAAAAATC TAGGTTACCA 8142 |||||||||| |||||||||| |||||||||| |||||||| | |||| ||||| || ||| | | AAAGACATAG GGATGTTGAA TCCATCAATA ACAGAAATGT CCCAGAAATC TAAGTTGCTA 120 AACTGGTTCA AAGCGTATTC AGCTAAGGTG TTTGGTGGTT TACCCCATCC TTTGCAATCC 8082 || || |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| AATTGATTCA AAGCGTATTC AGCTAAGGTG TTTGGTGGTT TACCCCATCC TTTGCATTCC 180 AGGACTCCAC CACAATCACC AGTCTGGCAC CAACCTCTTC CAGCACCATC AAAGTTGCAA 8022 | |||||||| |||||||||| ||||||||| |||||||| | |||||||||| ||| |||||| AAGACTCCAC CACAATCACC GGTCTGGCAC CAACCTCTAC CAGCACCATC AAAATTGCAA 240 TTAGTACGAC CCCAAATACG TGCCATTTTA GTGCCAGGTG GGGCCCAAAA CCACCAACTC 7962 |||||||||| |||||||||| ||||||||| ||||| |||| | |||||||| ||||||||| TTAGTACGAC CCCAAATACG TGCCATTTTG GTGCCCGGTG GAGCCCAAAA CCACCAACTT 300 TGACCTCTCT CGAGACGTCG ACCACCTCCT ACGGG 7927 |||||||||| |||||||||| ||||||||| ||||| TGACCTCTCT CGAGACGTCG GCCACCTCCT ACGGG 335 hqPGS_C08HBa0235H18.1-_SGN-E306515- (8261 7927) ******************************************************************************** EST sequence 368 -strand 411 n (File: SGN-E273584-) 1 GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 61 CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 121 TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 181 AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 241 GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 301 TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 361 CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC C Predicted gene structure (within gDNA segment 8992 to 4186): Exon 1 8342 7936 ( 407 n); cDNA 5 411 ( 407 n); score: 0.799 MATCH C08HBa0235H18.1- SGN-E273584- 0.799 407 0.990 C PGS_C08HBa0235H18.1-_SGN-E273584- (8342 7936) Alignment (genomic DNA sequence = upper lines): CAACAATATT GTTGTCCTCC GAATGTTGTA CAAGGGTTGT TACATCCTCC AGGTACCCTA 8283 |||||||||| |||||||||| || || ||| |||||||||| |||||||||| ||||||| || CAACAATATT GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA 64 AGTGAACCAG GGCATTCACC GTTTATATTG GCTGTGCATT GAATTGGATG ACATTTTCCA 8223 || | | || | |||||||| ||||||||| || ||||| | |||||| || ||||||||| AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 124 GGGCCAGGCT TAGTTGGGCC AAAAGACATA GGGATGTTGA ATCCATCAAT AACAGAAATA 8163 | ||| | | |||||| | ||||| ||| || || || | ||||||| | | |||||| CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 184 TCCCAAAAAT CTAGGTTACC AAACTGGTTC AAAGCGTATT CAGCTAAGGT GTTTGGTGGT 8103 |||||||||| ||| ||| | |||||||| | || ||||| | | |||| ||| |||||| ||| TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT 244 TTACCCCATC CTTTGCAATC CAGGACTCCA CCACAATCAC CAGTCTGGCA CCAACCTCTT 8043 || ||||||| | | || | | ||||||| |||||||||| ||||||| || |||||| TTGCCCCATC CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG 304 CCAGCACCAT CAAAGTTGCA ATTAGTACGA CCCCAAATAC GTGCCATTTT AGTGCCAGGT 7983 || ||| ||| ||||||||| | ||||||| ||||| |||| ||||||| || ||| || CCTGCAGCAT TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC 364 GGGGCCCAAA ACCACCAACT CTGACCTCTC TCGAGACGTC GACCACC 7936 || || | ||| | || |||| | |||||||| ||||||| GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACC 411 hqPGS_C08HBa0235H18.1-_SGN-E273584- (8342 7936) ******************************************************************************** EST sequence 88 -strand 498 n (File: SGN-E201255-) 1 AAGTAAAAGT ACTAGTTGGA TCGTCTTGAG GGTAACTATA GGCATCAGGA CATCTTTGTT 61 TGAAAAATCT TGACAATTCA GTAGGACCAC ATGGACCGTG ATTACAACAA TATTGTTGTC 121 CTCCGAATGT TGTACAAGGG TTGTTACATC CTCCAGGTAC CCTAAGTGAA CCAGGGCATT 181 CACCGTTTAT ATTGGCTGTG CATTGAATTG GATGACATTT TCCAGGGCCA GGCTTAGTTG 241 GGCCAAAAGA CATAGGGATG TTGAATCCAT CAATAACAGA AATATCCCAA AAATCTAGGT 301 TACCAAACTG GTTCAAAGCG TATTCAGCTA AGGTGTTTGG TGGTTTACCC CATCCTTTGC 361 AATCCAGGAC TCCACCACAA TCACCAGTCT GGCACCAACC TCTTCCAGCA CCATCAAAGT 421 TGCAATTAGT ACGACCCCAA ATACGTGCCA TTTTAGTGCC AGGTGGGGCC CAAAACCACC 481 AACTCTGACC TCTCTCGA Predicted gene structure (within gDNA segment 9056 to 7349): Exon 1 8446 7949 ( 498 n); cDNA 1 498 ( 498 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E201255- 1.000 498 1.000 C PGS_C08HBa0235H18.1-_SGN-E201255- (8446 7949) Alignment (genomic DNA sequence = upper lines): AAGTAAAAGT ACTAGTTGGA TCGTCTTGAG GGTAACTATA GGCATCAGGA CATCTTTGTT 8387 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTAAAAGT ACTAGTTGGA TCGTCTTGAG GGTAACTATA GGCATCAGGA CATCTTTGTT 60 TGAAAAATCT TGACAATTCA GTAGGACCAC ATGGACCGTG ATTACAACAA TATTGTTGTC 8327 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAAAATCT TGACAATTCA GTAGGACCAC ATGGACCGTG ATTACAACAA TATTGTTGTC 120 CTCCGAATGT TGTACAAGGG TTGTTACATC CTCCAGGTAC CCTAAGTGAA CCAGGGCATT 8267 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCCGAATGT TGTACAAGGG TTGTTACATC CTCCAGGTAC CCTAAGTGAA CCAGGGCATT 180 CACCGTTTAT ATTGGCTGTG CATTGAATTG GATGACATTT TCCAGGGCCA GGCTTAGTTG 8207 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCGTTTAT ATTGGCTGTG CATTGAATTG GATGACATTT TCCAGGGCCA GGCTTAGTTG 240 GGCCAAAAGA CATAGGGATG TTGAATCCAT CAATAACAGA AATATCCCAA AAATCTAGGT 8147 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCCAAAAGA CATAGGGATG TTGAATCCAT CAATAACAGA AATATCCCAA AAATCTAGGT 300 TACCAAACTG GTTCAAAGCG TATTCAGCTA AGGTGTTTGG TGGTTTACCC CATCCTTTGC 8087 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACCAAACTG GTTCAAAGCG TATTCAGCTA AGGTGTTTGG TGGTTTACCC CATCCTTTGC 360 AATCCAGGAC TCCACCACAA TCACCAGTCT GGCACCAACC TCTTCCAGCA CCATCAAAGT 8027 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATCCAGGAC TCCACCACAA TCACCAGTCT GGCACCAACC TCTTCCAGCA CCATCAAAGT 420 TGCAATTAGT ACGACCCCAA ATACGTGCCA TTTTAGTGCC AGGTGGGGCC CAAAACCACC 7967 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCAATTAGT ACGACCCCAA ATACGTGCCA TTTTAGTGCC AGGTGGGGCC CAAAACCACC 480 AACTCTGACC TCTCTCGA 7949 |||||||||| |||||||| AACTCTGACC TCTCTCGA 498 hqPGS_C08HBa0235H18.1-_SGN-E201255- (8446 7949) ******************************************************************************** EST sequence 417 -strand 232 n (File: SGN-E290848-) 1 TGAATCCATC AATAACAGAA ATGTCCCAGA AATCTAAGTT GCTAAATTGA TTCAAAGCGT 61 ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA TTCCAAGACT CCACCACAAT 121 CACCGGTATG GCACCAACCT CTACCAGCAC CATCAAAATT GCAATTAGTA CGACCCCAAA 181 TACGTGCCAT TTTGGTGCCC GGTGGAGCCC AAAACCACCA ACTTTGACCT CT Predicted gene structure (within gDNA segment 9245 to 7273): Exon 1 8185 7954 ( 232 n); cDNA 1 232 ( 232 n); score: 0.927 MATCH C08HBa0235H18.1- SGN-E290848- 0.927 232 1.000 C PGS_C08HBa0235H18.1-_SGN-E290848- (8185 7954) Alignment (genomic DNA sequence = upper lines): TGAATCCATC AATAACAGAA ATATCCCAAA AATCTAGGTT ACCAAACTGG TTCAAAGCGT 8126 |||||||||| |||||||||| || ||||| | |||||| ||| | ||| || |||||||||| TGAATCCATC AATAACAGAA ATGTCCCAGA AATCTAAGTT GCTAAATTGA TTCAAAGCGT 60 ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA ATCCAGGACT CCACCACAAT 8066 |||||||||| |||||||||| |||||||||| |||||||||| |||| |||| |||||||||| ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA TTCCAAGACT CCACCACAAT 120 CACCAGTCTG GCACCAACCT CTTCCAGCAC CATCAAAGTT GCAATTAGTA CGACCCCAAA 8006 |||| || || |||||||||| || ||||||| ||||||| || |||||||||| |||||||||| CACCGGTATG GCACCAACCT CTACCAGCAC CATCAAAATT GCAATTAGTA CGACCCCAAA 180 TACGTGCCAT TTTAGTGCCA GGTGGGGCCC AAAACCACCA ACTCTGACCT CT 7954 |||||||||| ||| ||||| ||||| |||| |||||||||| ||| |||||| || TACGTGCCAT TTTGGTGCCC GGTGGAGCCC AAAACCACCA ACTTTGACCT CT 232 hqPGS_C08HBa0235H18.1-_SGN-E290848- (8185 7954) ******************************************************************************** EST sequence 147 -strand 511 n (File: SGN-E204787-) 1 TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 61 TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 121 CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 181 GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 241 ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 301 AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT 361 TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG 421 TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG 481 TTCCCCTCGG AGCATTGATG ACCCATGTTT G Predicted gene structure (within gDNA segment 10232 to 3826): Exon 1 8468 7960 ( 509 n); cDNA 3 511 ( 509 n); score: 0.794 MATCH C08HBa0235H18.1- SGN-E204787- 0.794 509 0.996 C PGS_C08HBa0235H18.1-_SGN-E204787- (8468 7960) Alignment (genomic DNA sequence = upper lines): TAGTCTGTAG TCCAACTCTG ACAAGTAAAA GTACTAGTTG GATCGTCTTG AGGGTAACTA 8409 |||| |||| | | || | |||||||| || || || | |||||||||| ||||| ||| TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA 62 TAGGCATCAG GACATCTTTG TTTGAAAAAT CTTGACAATT CAGTAGGACC ACATGGACCG 8349 || ||||| | ||||||||| ||||||||| | ||||| | | ||||| || ||||||||| TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT 122 TGATTACAAC AATATTGTTG TCCTCCGAAT GTTGTACAAG GGTTGTTACA TCCTCCAGGT 8289 || | |||| |||||||||| |||||| || || ||||||| |||||||||| |||||||||| TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 182 ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTGGCTG TGCATTGAAT TGGATGACAT 8229 ||| |||| | | ||| || |||||| ||| |||||||| | |||| ||||| || |||||| ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 242 TTTCCAGGGC CAGGCTTAGT TGGGCCAAAA GACATAGGGA TGTTGAATCC ATCAATAACA 8169 ||||| | ||| || || |||| ||||| | ||| || | | || ||||| ||| | | | TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 302 GAAATATCCC AAAAATCTAG GTTACCAAAC TGGTTCAAAG CGTATTCAGC TAAGGTGTTT 8109 ||||| |||| ||||||||| ||| | |||| |||| ||| | |||| || || || ||||||| GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 362 GGTGGTTTAC CCCATCCTTT GCAATCCAGG ACTCCACCAC AATCACCAGT CTGGCACCAA 8049 || ||||| | ||||||| | || | | | |||||||||| |||||||||| ||| || | GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 422 CCTCTTCCAG CACCATCAAA GTTGCAATTA GTACGACCCC AAATACGTGC CATTTTAGTG 7989 ||||| || | || ||| ||| ||||||| | |||||||||| | |||||||| ||| ||||| CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 482 CCAGGTGGGG CCCAAAACCA CCAACTCTG 7960 || || | | | ||| | || CCCCTCGGAG CATTGATGAC CCATGTTTG 511 hqPGS_C08HBa0235H18.1-_SGN-E204787- (8468 7960) ******************************************************************************** EST sequence 379 -strand 736 n (File: SGN-E357015-) 1 TAAAGTACAA TATGTTATGA AAACTTAGCC ACCTCAAGAT ACAAACTAAA AGAAATGTGG 61 ATATACAAAA GNCAAGTAAT GAACAAAACT CAACCATTTN GAACAAGAAA GAGGTGGCTA 121 CACTCATGAT GAATCTACTT ATTAAGCAAC TTCAAGAGTA CTTGTAGGCA TCTCCAATGG 181 GAAATTTGTT GTTTCATTGT GAGTAGAGCC ATAAGGACAG AACATTATCT TGTAGTCTGT 241 AGTCCAACTC TGACAAGTAA AAGTACTAGT TGGATCGTCT TGAGGGTAAC TATAGGCATC 301 AGGACATCTT TGTTTGAAAA ATCTTGACAA TTCAGTAGGA CCACATGGAC CGTGATTACA 361 ACAATATTGT TGTCCTCCGA ATGTTGTACA AGGGTTGTTA CATCCTCCAG GTACCCTAAG 421 TGAACCAGGG CATTCACCGT TTATATTGGC TGTGCATTGA ATTGGATGAC ATTTTCCAGG 481 GCCAGGCTTA GTTGGGCCAA AAGACATAGG GATGTTGAAT CCATCAATAA CAGAAATATC 541 CCAAAAATCT AGGTTACCAA ACTGGTTCAA AGCGTATTCA GCTAAGGTGT TTGGTGGTTT 601 ACCCCATCCT TTGCAATCCA GGACTCCACC ACAATCACCA GTCTGGCACC AACCTCTTCC 661 AGCACCATCA AAGTTGCAAT TAGTACGACC CCAAATACGT GCCATTTTAG TGCCAGGTGG 721 GGCCCAAAAC CACCAA Predicted gene structure (within gDNA segment 9313 to 7365): Exon 1 8703 7965 ( 739 n); cDNA 1 736 ( 736 n); score: 0.992 MATCH C08HBa0235H18.1- SGN-E357015- 0.992 739 1.004 C PGS_C08HBa0235H18.1-_SGN-E357015- (8703 7965) Alignment (genomic DNA sequence = upper lines): TAAAGTACAA TATGTTATTG AAATCTTAGC CACCTCAAGA TAACAAACTA AAAGAAATGT 8644 |||||||||| ||||||| || ||| |||||| |||||||||| | |||||||| |||||||||| TAAAGTACAA TATGTTA-TG AAAACTTAGC CACCTCAAGA T-ACAAACTA AAAGAAATGT 58 GGATAATACA AAAGACAAGT AATGAACAAA ACTCAACCAT TTTGAACAAG AAAGAGGTGG 8584 |||| ||||| |||| ||||| |||||||||| |||||||||| || ||||||| |||||||||| GGAT-ATACA AAAGNCAAGT AATGAACAAA ACTCAACCAT TTNGAACAAG AAAGAGGTGG 117 CTACACTCAT GATGAATCTA CTTATTAAGC AACTTCAAGA GTACTTGTAG GCATCTCCAA 8524 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTACACTCAT GATGAATCTA CTTATTAAGC AACTTCAAGA GTACTTGTAG GCATCTCCAA 177 TGGGAAATTT GTTGTTTCAT TGTGAGTAGA GCCATAAGGA CAGAACATTA TCTTGTAGTC 8464 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGGAAATTT GTTGTTTCAT TGTGAGTAGA GCCATAAGGA CAGAACATTA TCTTGTAGTC 237 TGTAGTCCAA CTCTGACAAG TAAAAGTACT AGTTGGATCG TCTTGAGGGT AACTATAGGC 8404 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTAGTCCAA CTCTGACAAG TAAAAGTACT AGTTGGATCG TCTTGAGGGT AACTATAGGC 297 ATCAGGACAT CTTTGTTTGA AAAATCTTGA CAATTCAGTA GGACCACATG GACCGTGATT 8344 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCAGGACAT CTTTGTTTGA AAAATCTTGA CAATTCAGTA GGACCACATG GACCGTGATT 357 ACAACAATAT TGTTGTCCTC CGAATGTTGT ACAAGGGTTG TTACATCCTC CAGGTACCCT 8284 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAACAATAT TGTTGTCCTC CGAATGTTGT ACAAGGGTTG TTACATCCTC CAGGTACCCT 417 AAGTGAACCA GGGCATTCAC CGTTTATATT GGCTGTGCAT TGAATTGGAT GACATTTTCC 8224 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTGAACCA GGGCATTCAC CGTTTATATT GGCTGTGCAT TGAATTGGAT GACATTTTCC 477 AGGGCCAGGC TTAGTTGGGC CAAAAGACAT AGGGATGTTG AATCCATCAA TAACAGAAAT 8164 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGCCAGGC TTAGTTGGGC CAAAAGACAT AGGGATGTTG AATCCATCAA TAACAGAAAT 537 ATCCCAAAAA TCTAGGTTAC CAAACTGGTT CAAAGCGTAT TCAGCTAAGG TGTTTGGTGG 8104 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCCCAAAAA TCTAGGTTAC CAAACTGGTT CAAAGCGTAT TCAGCTAAGG TGTTTGGTGG 597 TTTACCCCAT CCTTTGCAAT CCAGGACTCC ACCACAATCA CCAGTCTGGC ACCAACCTCT 8044 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTACCCCAT CCTTTGCAAT CCAGGACTCC ACCACAATCA CCAGTCTGGC ACCAACCTCT 657 TCCAGCACCA TCAAAGTTGC AATTAGTACG ACCCCAAATA CGTGCCATTT TAGTGCCAGG 7984 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCAGCACCA TCAAAGTTGC AATTAGTACG ACCCCAAATA CGTGCCATTT TAGTGCCAGG 717 TGGGGCCCAA AACCACCAA 7965 |||||||||| ||||||||| TGGGGCCCAA AACCACCAA 736 hqPGS_C08HBa0235H18.1-_SGN-E357015- (8703 7965) ******************************************************************************** EST sequence 254 -strand 499 n (File: SGN-E200099-) 1 TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 61 TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 121 CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 181 GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 241 ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 301 AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT 361 TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG 421 TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG 481 TTCCCCTCGG AGCATTGAT Predicted gene structure (within gDNA segment 10232 to 4546): Exon 1 8468 7978 ( 491 n); cDNA 3 493 ( 491 n); score: 0.809 MATCH C08HBa0235H18.1- SGN-E200099- 0.809 491 0.984 C PGS_C08HBa0235H18.1-_SGN-E200099- (8468 7978) Alignment (genomic DNA sequence = upper lines): TAGTCTGTAG TCCAACTCTG ACAAGTAAAA GTACTAGTTG GATCGTCTTG AGGGTAACTA 8409 |||| |||| | | || | |||||||| || || || | |||||||||| ||||| ||| TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA 62 TAGGCATCAG GACATCTTTG TTTGAAAAAT CTTGACAATT CAGTAGGACC ACATGGACCG 8349 || ||||| | ||||||||| ||||||||| | ||||| | | ||||| || ||||||||| TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT 122 TGATTACAAC AATATTGTTG TCCTCCGAAT GTTGTACAAG GGTTGTTACA TCCTCCAGGT 8289 || | |||| |||||||||| |||||| || || ||||||| |||||||||| |||||||||| TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 182 ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTGGCTG TGCATTGAAT TGGATGACAT 8229 ||| |||| | | ||| || |||||| ||| |||||||| | |||| ||||| || |||||| ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 242 TTTCCAGGGC CAGGCTTAGT TGGGCCAAAA GACATAGGGA TGTTGAATCC ATCAATAACA 8169 ||||| | ||| || || |||| ||||| | ||| || | | || ||||| ||| | | | TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 302 GAAATATCCC AAAAATCTAG GTTACCAAAC TGGTTCAAAG CGTATTCAGC TAAGGTGTTT 8109 ||||| |||| ||||||||| ||| | |||| |||| ||| | |||| || || || ||||||| GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 362 GGTGGTTTAC CCCATCCTTT GCAATCCAGG ACTCCACCAC AATCACCAGT CTGGCACCAA 8049 || ||||| | ||||||| | || | | | |||||||||| |||||||||| ||| || | GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 422 CCTCTTCCAG CACCATCAAA GTTGCAATTA GTACGACCCC AAATACGTGC CATTTTAGTG 7989 ||||| || | || ||| ||| ||||||| | |||||||||| | |||||||| ||| ||||| CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 482 CCAGGTGGGG C 7978 || || | | CCCCTCGGAG C 493 hqPGS_C08HBa0235H18.1-_SGN-E200099- (8468 7978) ******************************************************************************** EST sequence 397 -strand 251 n (File: SGN-E357567-) 1 ATTTTCCAGG GCCAGGCTTA GTTGGGCCAA AAGACATAGG GATGTTGAAT CCATCAATAA 61 CAGAAATATC CCAAAAATCT AGGTTACCAA ACTGGTTCAA AGCGTATTCA GCTAAGGTGT 121 TTGGTGGTTT ACCCCATCCT TTGCAATCCA GGACTCCACC ACAATCACCA GTCTGGCACC 181 AACCTCTTCC AGCACCATCA AAGTTGCAAT TAGTACGACC CCAAATACGT GCCATTTTAG 241 TGCCAGGTGG G Predicted gene structure (within gDNA segment 8840 to 7380): Exon 1 8230 7980 ( 251 n); cDNA 1 251 ( 251 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E357567- 1.000 251 1.000 C PGS_C08HBa0235H18.1-_SGN-E357567- (8230 7980) Alignment (genomic DNA sequence = upper lines): ATTTTCCAGG GCCAGGCTTA GTTGGGCCAA AAGACATAGG GATGTTGAAT CCATCAATAA 8171 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTTCCAGG GCCAGGCTTA GTTGGGCCAA AAGACATAGG GATGTTGAAT CCATCAATAA 60 CAGAAATATC CCAAAAATCT AGGTTACCAA ACTGGTTCAA AGCGTATTCA GCTAAGGTGT 8111 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGAAATATC CCAAAAATCT AGGTTACCAA ACTGGTTCAA AGCGTATTCA GCTAAGGTGT 120 TTGGTGGTTT ACCCCATCCT TTGCAATCCA GGACTCCACC ACAATCACCA GTCTGGCACC 8051 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGTGGTTT ACCCCATCCT TTGCAATCCA GGACTCCACC ACAATCACCA GTCTGGCACC 180 AACCTCTTCC AGCACCATCA AAGTTGCAAT TAGTACGACC CCAAATACGT GCCATTTTAG 7991 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACCTCTTCC AGCACCATCA AAGTTGCAAT TAGTACGACC CCAAATACGT GCCATTTTAG 240 TGCCAGGTGG G 7980 |||||||||| | TGCCAGGTGG G 251 hqPGS_C08HBa0235H18.1-_SGN-E357567- (8230 7980) ******************************************************************************** EST sequence 164 -strand 595 n (File: SGN-E295872-) 1 CACTCATGAT GAATCTACTT ATTAAGCAAC TTCAAGAGTA CTTGTAGGCA TCTCCAATGG 61 GAAATTTGTT GTTTCATTGT GAGTAGAGCC ATAAGGACAG AACATTATCT TGTAGTCTGT 121 AGTCCAACTC TGACAAGTAA AAGTACTAGT TGGATCGTCT TGAGGGTAAC TATAGGCATC 181 AGGACATCTT TGTTTGAAAA ATCTTGACAA TTCAGTAGGA CCACATGGAC CGTGATTACA 241 ACAATATTGT TGTCCTCCGA ATGTTGTACA AGGGTTGTTA CATCCTCCAG GTACCCTAAG 301 TGAACCAGGG CATTCACCGT TTATATTGGC TGTGCATTGA ATTGGATGAC ATTTTCCAGG 361 GCCAGGCTTA GTTGGGCCAA AAGACATAGG GATGTTGAAT CCATCAATAA CAGAAATATC 421 CCAAAAATCT AGGTTACCAA ACTGGTTCAA AGCGTATTCA GCTAAGGTGT TTGGTGGTTT 481 ACCCCATCCT TTGCAATCCA GGACTCCACC ACAATCACCA GTCTGGCACC AACCTCTTCC 541 AGCACCATCA AAGTTGCAAT TAGTACGACC CCAAATACGT GCCATTTTAG TGCCA Predicted gene structure (within gDNA segment 9190 to 7386): Exon 1 8580 7986 ( 595 n); cDNA 1 595 ( 595 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E295872- 1.000 595 1.000 C PGS_C08HBa0235H18.1-_SGN-E295872- (8580 7986) Alignment (genomic DNA sequence = upper lines): CACTCATGAT GAATCTACTT ATTAAGCAAC TTCAAGAGTA CTTGTAGGCA TCTCCAATGG 8521 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACTCATGAT GAATCTACTT ATTAAGCAAC TTCAAGAGTA CTTGTAGGCA TCTCCAATGG 60 GAAATTTGTT GTTTCATTGT GAGTAGAGCC ATAAGGACAG AACATTATCT TGTAGTCTGT 8461 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAATTTGTT GTTTCATTGT GAGTAGAGCC ATAAGGACAG AACATTATCT TGTAGTCTGT 120 AGTCCAACTC TGACAAGTAA AAGTACTAGT TGGATCGTCT TGAGGGTAAC TATAGGCATC 8401 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTCCAACTC TGACAAGTAA AAGTACTAGT TGGATCGTCT TGAGGGTAAC TATAGGCATC 180 AGGACATCTT TGTTTGAAAA ATCTTGACAA TTCAGTAGGA CCACATGGAC CGTGATTACA 8341 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGACATCTT TGTTTGAAAA ATCTTGACAA TTCAGTAGGA CCACATGGAC CGTGATTACA 240 ACAATATTGT TGTCCTCCGA ATGTTGTACA AGGGTTGTTA CATCCTCCAG GTACCCTAAG 8281 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAATATTGT TGTCCTCCGA ATGTTGTACA AGGGTTGTTA CATCCTCCAG GTACCCTAAG 300 TGAACCAGGG CATTCACCGT TTATATTGGC TGTGCATTGA ATTGGATGAC ATTTTCCAGG 8221 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAACCAGGG CATTCACCGT TTATATTGGC TGTGCATTGA ATTGGATGAC ATTTTCCAGG 360 GCCAGGCTTA GTTGGGCCAA AAGACATAGG GATGTTGAAT CCATCAATAA CAGAAATATC 8161 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCAGGCTTA GTTGGGCCAA AAGACATAGG GATGTTGAAT CCATCAATAA CAGAAATATC 420 CCAAAAATCT AGGTTACCAA ACTGGTTCAA AGCGTATTCA GCTAAGGTGT TTGGTGGTTT 8101 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAAAAATCT AGGTTACCAA ACTGGTTCAA AGCGTATTCA GCTAAGGTGT TTGGTGGTTT 480 ACCCCATCCT TTGCAATCCA GGACTCCACC ACAATCACCA GTCTGGCACC AACCTCTTCC 8041 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCCCATCCT TTGCAATCCA GGACTCCACC ACAATCACCA GTCTGGCACC AACCTCTTCC 540 AGCACCATCA AAGTTGCAAT TAGTACGACC CCAAATACGT GCCATTTTAG TGCCA 7986 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| AGCACCATCA AAGTTGCAAT TAGTACGACC CCAAATACGT GCCATTTTAG TGCCA 595 hqPGS_C08HBa0235H18.1-_SGN-E295872- (8580 7986) ******************************************************************************** EST sequence 96 -strand 464 n (File: SGN-E201711-) 1 GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 61 TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 121 TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 181 CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 241 GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 301 AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 361 GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 421 AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCC Predicted gene structure (within gDNA segment 10032 to 4696): Exon 1 8447 7987 ( 461 n); cDNA 4 464 ( 461 n); score: 0.824 MATCH C08HBa0235H18.1- SGN-E201711- 0.824 461 0.994 C PGS_C08HBa0235H18.1-_SGN-E201711- (8447 7987) Alignment (genomic DNA sequence = upper lines): CAAGTAAAAG TACTAGTTGG ATCGTCTTGA GGGTAACTAT AGGCATCAGG ACATCTTTGT 8388 |||||||| | | || || || ||||||||| ||||| |||| | ||||| || |||||||| CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC 63 TTGAAAAATC TTGACAATTC AGTAGGACCA CATGGACCGT GATTACAACA ATATTGTTGT 8328 ||||||||| | ||||| || ||||| ||| |||||||| | | | ||||| |||||||||| TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT 123 CCTCCGAATG TTGTACAAGG GTTGTTACAT CCTCCAGGTA CCCTAAGTGA ACCAGGGCAT 8268 ||||| || | | |||||||| |||||||||| |||||||||| || |||| | | ||| ||| CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT 183 TCACCGTTTA TATTGGCTGT GCATTGAATT GGATGACATT TTCCAGGGCC AGGCTTAGTT 8208 ||||| |||| ||||||| || ||| |||||| | ||||||| |||| | ||| || ||| TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT 243 GGGCCAAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG AAATATCCCA AAAATCTAGG 8148 ||| |||||| ||| || || || |||||| || | | || |||| ||||| |||||||| | GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG 303 TTACCAAACT GGTTCAAAGC GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG 8088 || | ||||| ||| ||| || ||| || ||| | |||||||| | ||||| || |||||| | TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA 363 CAATCCAGGA CTCCACCACA ATCACCAGTC TGGCACCAAC CTCTTCCAGC ACCATCAAAG 8028 || | | || |||||||||| |||||||||| || || || |||| || || | ||| |||| CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG 423 TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTAGTGC C 7987 |||||| || |||||||||| ||||||||| || ||||| | | TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC C 464 hqPGS_C08HBa0235H18.1-_SGN-E201711- (8447 7987) ******************************************************************************** EST sequence 257 -strand 672 n (File: SGN-E268624-) 1 ATCAATAAAG TAAAAGTGAA TATTTAAAAA ACTGAGCTAT TAAGATTTTT CATTACGGTA 61 GAGATCAGTT GACTAATTGA GGCGATTTAA AATGAAGAAA CTCAAATTCA CTTGGCCACT 121 TCATCAGTAC TTGCAGGCAT CTCCAAGGGG AAATTTGGAT CAGCAACACC ATTAGGACAA 181 AAGACAACCC TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT 241 TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG 301 CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA 361 CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA 421 ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT 481 CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG 541 GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA 601 GTCTGACATG TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT 661 GCCATCTTAG TT Predicted gene structure (within gDNA segment 12132 to 4716): Exon 1 8555 7990 ( 566 n); cDNA 115 671 ( 557 n); score: 0.800 MATCH C08HBa0235H18.1- SGN-E268624- 0.800 566 0.842 C PGS_C08HBa0235H18.1-_SGN-E268624- (8555 7990) Alignment (genomic DNA sequence = upper lines): GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA 8496 || |||||| |||||||| |||||||||| || ||||||| ||| | || | | | | GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTG--G-ATC A--G-CA--A 166 GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA 8436 | |||| || |||| || | | | | ||| | |||| | | || | || |||||| || CA-CCATTAG GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA AGTAAATGTG 225 CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT GAAAAATCTT 8376 || || |||| ||||||| || ||| ||||| ||||| |||| |||||| || ||||||| | CTTGTAGGAT CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG 285 GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC TCCGAATGTT 8316 ||||| || | |||| ||||| |||||| || | ||||||| |||||||||| ||| || || GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG 345 GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC ACCGTTTATA 8256 |||||||||| |||||||||| |||||||||| |||| | | ||| ||||| ||| |||||| GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC ACCATTTATA 405 TTGGCTGTGC ATTGAATTGG ATGACATTTT CCAGGGCCAG GCTTAGTTGG GCCAAAAGAC 8196 ||||| |||| | ||||||| ||||||||| || | || | || ||||| | |||||| | TTGGCCGTGC AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC 465 ATAGGGATGT TGAATCCATC AATAACAGAA ATATCCCAAA AATCTAGGTT ACCAAACTGG 8136 || || || | | |||||||| | | |||| || ||||||| |||||| ||| | ||||||| ATTGGAATAT TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG 525 TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA ATCCAGGACT 8076 | ||| |||| | || |||| ||||||||| ||||| |||| |||| | || | | |||| TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT 585 CCACCACAAT CACCAGTCTG GCACCAACCT CTTCCAGCAC CATCAAAGTT GCAATTAGTA 8016 |||||||||| |||||||||| || |||| || || ||| ||| |||||| |||| |||| CCACCACAAT CACCAGTCTG ACATGTACCT CTGCCTGCAG CATTAAAGTT GCAACCAGTA 645 CGACCCCAAA TACGTGCCAT TTTAGT 7990 |||||||| | |||||||||| ||||| CGACCCCATA TACGTGCCAT CTTAGT 671 hqPGS_C08HBa0235H18.1-_SGN-E268624- (8555 7990) ******************************************************************************** EST sequence 419 -strand 658 n (File: SGN-E357685-) 1 AAATGTGGAT AATACAAAAG ACAAGTAATG AACAAAACTC AACCATTTGA CNAAGAAAGA 61 GGTGGCTACA CTCATGATGA ATCTACTTAT TAAGCAACTT CAAGAGTACT TGTAGGCATC 121 TCCAATGGGA AATTTGTTGT TTCATTGTGA GTAGAGCCAT AAGGACAGAA CATTATCTTG 181 TAGTCTGTAG TCCAACTCTG ACAAGTAAAA GTACTAGTTG GATCGTCTTG AGGGTAACTA 241 TAGGCATCAG GACATCTTTG TTTGAAAAAT CTTGACAATT CAGTAGGACC ACATGGACCG 301 TGATTACAAC AATATTGTTG TCCTCCGAAT GTTGTACAAG GGTTGTTACA TCCTCCAGGT 361 ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTGGCTG TGCATTGAAT TGGATGACAT 421 TTTCCAGGGC CAGGCTTAGT TGGGCCAAAA GACATAGGGA TGTTGAATCC ATCAATAACA 481 GAAATATCCC AAAAATCTAG GTTACCAAAC TGGTTCAAAG CGTATTCAGC TAAGGTGTTT 541 GGTGGTTTAC CCCATCCTTT GCAATCCAGG ACTCCACCAC AATCACCAGT CTGGCACCAA 601 CCTCTTCCAG CACCATCAAA GTTGCAATTA GTACGACCCC AAATACGTGC CATTTTAG Predicted gene structure (within gDNA segment 9259 to 7391): Exon 1 8649 7991 ( 659 n); cDNA 1 658 ( 658 n); score: 0.995 MATCH C08HBa0235H18.1- SGN-E357685- 0.995 659 1.002 C PGS_C08HBa0235H18.1-_SGN-E357685- (8649 7991) Alignment (genomic DNA sequence = upper lines): AAATGTGGAT AATACAAAAG ACAAGTAATG AACAAAACTC AACCATTTTG AACAAGAAAG 8590 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| | ||||||| AAATGTGGAT AATACAAAAG ACAAGTAATG AACAAAACTC AACCA-TTTG ACNAAGAAAG 59 AGGTGGCTAC ACTCATGATG AATCTACTTA TTAAGCAACT TCAAGAGTAC TTGTAGGCAT 8530 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGTGGCTAC ACTCATGATG AATCTACTTA TTAAGCAACT TCAAGAGTAC TTGTAGGCAT 119 CTCCAATGGG AAATTTGTTG TTTCATTGTG AGTAGAGCCA TAAGGACAGA ACATTATCTT 8470 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCCAATGGG AAATTTGTTG TTTCATTGTG AGTAGAGCCA TAAGGACAGA ACATTATCTT 179 GTAGTCTGTA GTCCAACTCT GACAAGTAAA AGTACTAGTT GGATCGTCTT GAGGGTAACT 8410 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTAGTCTGTA GTCCAACTCT GACAAGTAAA AGTACTAGTT GGATCGTCTT GAGGGTAACT 239 ATAGGCATCA GGACATCTTT GTTTGAAAAA TCTTGACAAT TCAGTAGGAC CACATGGACC 8350 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGGCATCA GGACATCTTT GTTTGAAAAA TCTTGACAAT TCAGTAGGAC CACATGGACC 299 GTGATTACAA CAATATTGTT GTCCTCCGAA TGTTGTACAA GGGTTGTTAC ATCCTCCAGG 8290 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGATTACAA CAATATTGTT GTCCTCCGAA TGTTGTACAA GGGTTGTTAC ATCCTCCAGG 359 TACCCTAAGT GAACCAGGGC ATTCACCGTT TATATTGGCT GTGCATTGAA TTGGATGACA 8230 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACCCTAAGT GAACCAGGGC ATTCACCGTT TATATTGGCT GTGCATTGAA TTGGATGACA 419 TTTTCCAGGG CCAGGCTTAG TTGGGCCAAA AGACATAGGG ATGTTGAATC CATCAATAAC 8170 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTCCAGGG CCAGGCTTAG TTGGGCCAAA AGACATAGGG ATGTTGAATC CATCAATAAC 479 AGAAATATCC CAAAAATCTA GGTTACCAAA CTGGTTCAAA GCGTATTCAG CTAAGGTGTT 8110 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAATATCC CAAAAATCTA GGTTACCAAA CTGGTTCAAA GCGTATTCAG CTAAGGTGTT 539 TGGTGGTTTA CCCCATCCTT TGCAATCCAG GACTCCACCA CAATCACCAG TCTGGCACCA 8050 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTGGTTTA CCCCATCCTT TGCAATCCAG GACTCCACCA CAATCACCAG TCTGGCACCA 599 ACCTCTTCCA GCACCATCAA AGTTGCAATT AGTACGACCC CAAATACGTG CCATTTTAG 7991 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| ACCTCTTCCA GCACCATCAA AGTTGCAATT AGTACGACCC CAAATACGTG CCATTTTAG 658 hqPGS_C08HBa0235H18.1-_SGN-E357685- (8649 7991) ******************************************************************************** EST sequence 1019 +strand 773 n (File: SGN-E548946+) 1 TTTTTTTTTT CCGATATAAT TTCAATTTAA AATTAAAATA CCATATATAA GACAAAGCAT 61 CGATCATAGA TTGTTATTCA GATCTTAGCC ACTTCAAACA AACAAATGTA AAAGAAATGT 121 GTACAAGGCA AATTAAAGAC AATGTCCATC TTCAAAACAA ATTTAACAAA AAAGAGATTG 181 GCTCAACTCA AGATTTCTAC TTAATTAAGC CACTTCAAGA GTATTTGTAG GAATCTCCAA 241 TGGGAAATTT GTTGTTTCAT TGTGAGTAGA GCCATAAGGA CAAAACATAA CCTTGTAGTC 301 TGTAGTCCAA CTCTGACAAG TAAAAGTACT TGTTGGATCG TCTTGAGGAT AACTATAGGC 361 ATCGGGACAT CTTTGTTTGA AAAATCTTGA CAAATCGGTA GGACCACATG GACCTTGAGT 421 GCAACAATAT TGTTGTCCTC CGAATGTAGT ACAAGGGTTG TTACATCCTC CGGGTACCCT 481 AAGTGAACCA GGGCATTCAC CGTTTATATT AGCAACACAT TGAATTGGAT GACATTTTCC 541 CGGCCCAGGG TTAGTTGGGC CGAAAGACAT AGGGATGTTG AATCCATCAA TAACAGAAAT 601 GTCCCAGAAA TCTAAGTTGC TAAATTGATT CAAAGCGTAT TCAGCTAAGG TGTTTGGTGG 661 TTTACCCCAT CCTTTGCATT CCAAGACTCC ACCACAATCA CCGGTCTGGC ACCAACCTCT 721 ACCAGCACCA TCAAAATTGC AATTAGTACG ACCCCAAATA CGTGCCATTT TTG Predicted gene structure (within gDNA segment 11451 to 7363): Exon 1 8691 7993 ( 699 n); cDNA 72 771 ( 700 n); score: 0.883 PPA cDNA 10 1 MATCH C08HBa0235H18.1- SGN-E548946+ 0.883 699 0.904 C PGS_C08HBa0235H18.1-_SGN-E548946+ (8691 7993) Alignment (genomic DNA sequence = upper lines): TGTTATTGAA ATCTTAGCCA CCTCAAGATA ACAAAC-TAA AAGAAATGTG GATAATACAA 8633 ||||||| | |||||||||| | |||| | ||||| ||| |||||||||| | || ||| TGTTATTCAG ATCTTAGCCA CTTCAAACAA ACAAATGTAA AAGAAATGTG TACAAGGCAA 131 AAGACAAGTA ATGAACAAAA CTCAACCATT TTGAACAAGA AAGAGG-TGG CTACACTCAT 8574 | | | | ||| || || || || ||||| | ||||| ||| || ||||| ATTAAAGACA ATGTCCATCT TCAAAACAAA TTTAACAAAA AAGAGATTGG CTCAACTCAA 191 GATGAATCTA CTT-ATTAAG CAACTTCAAG AGTACTTGTA GGCATCTCCA ATGGGAAATT 8515 ||| |||| ||| |||||| | |||||||| |||| ||||| || ||||||| |||||||||| GAT--TTCTA CTTAATTAAG CCACTTCAAG AGTATTTGTA GGAATCTCCA ATGGGAAATT 249 TGTTGTTTCA TTGTGAGTAG AGCCATAAGG ACAGAACATT ATCTTGTAGT CTGTAGTCCA 8455 |||||||||| |||||||||| |||||||||| ||| ||||| | |||||||| |||||||||| TGTTGTTTCA TTGTGAGTAG AGCCATAAGG ACAAAACATA ACCTTGTAGT CTGTAGTCCA 309 ACTCTGACAA GTAAAAGTAC TAGTTGGATC GTCTTGAGGG TAACTATAGG CATCAGGACA 8395 |||||||||| |||||||||| | |||||||| ||||||||| |||||||||| |||| ||||| ACTCTGACAA GTAAAAGTAC TTGTTGGATC GTCTTGAGGA TAACTATAGG CATCGGGACA 369 TCTTTGTTTG AAAAATCTTG ACAATTCAGT AGGACCACAT GGACCGTGAT TACAACAATA 8335 |||||||||| |||||||||| |||| || || |||||||||| ||||| ||| | |||||||| TCTTTGTTTG AAAAATCTTG ACAAATCGGT AGGACCACAT GGACCTTGAG TGCAACAATA 429 TTGTTGTCCT CCGAATGTTG TACAAGGGTT GTTACATCCT CCAGGTACCC TAAGTGAACC 8275 |||||||||| |||||||| | |||||||||| |||||||||| || ||||||| |||||||||| TTGTTGTCCT CCGAATGTAG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGAACC 489 AGGGCATTCA CCGTTTATAT TGGCTGTGCA TTGAATTGGA TGACATTTTC CAGGGCCAGG 8215 |||||||||| |||||||||| | || || |||||||||| |||||||||| | || ||||| AGGGCATTCA CCGTTTATAT TAGCAACACA TTGAATTGGA TGACATTTTC CCGGCCCAGG 549 CTTAGTTGGG CCAAAAGACA TAGGGATGTT GAATCCATCA ATAACAGAAA TATCCCAAAA 8155 ||||||||| || ||||||| |||||||||| |||||||||| |||||||||| | ||||| || GTTAGTTGGG CCGAAAGACA TAGGGATGTT GAATCCATCA ATAACAGAAA TGTCCCAGAA 609 ATCTAGGTTA CCAAACTGGT TCAAAGCGTA TTCAGCTAAG GTGTTTGGTG GTTTACCCCA 8095 ||||| ||| | ||| || | |||||||||| |||||||||| |||||||||| |||||||||| ATCTAAGTTG CTAAATTGAT TCAAAGCGTA TTCAGCTAAG GTGTTTGGTG GTTTACCCCA 669 TCCTTTGCAA TCCAGGACTC CACCACAATC ACCAGTCTGG CACCAACCTC TTCCAGCACC 8035 ||||||||| |||| ||||| |||||||||| ||| |||||| |||||||||| | |||||||| TCCTTTGCAT TCCAAGACTC CACCACAATC ACCGGTCTGG CACCAACCTC TACCAGCACC 729 ATCAAAGTTG CAATTAGTAC GACCCCAAAT ACGTGCCATT TT 7993 |||||| ||| |||||||||| |||||||||| |||||||||| || ATCAAAATTG CAATTAGTAC GACCCCAAAT ACGTGCCATT TT 771 hqPGS_C08HBa0235H18.1-_SGN-E548946+ (8691 7993) ******************************************************************************** EST sequence 400 -strand 669 n (File: SGN-E357464-) 1 AAGATAACAA ACTAAAGAAA ATGTGGATAT TACAAAAGAC AAGTAATGAC AAAACTCAAC 61 CCATTTTGAN CAAGAAAGAG GTGGCTACAC TCATGATGAA TCTACTTATT AAGCAACTTC 121 AAGAGTACTT GTAGGCATCT CCAATGGGAA ATTTGTTGTT TCATTGTGAG TAGAGCCATA 181 AGGACAGAAC ATTATCTTGT AGTCTGTAGT CCAACTCTGA CAAGTAAAAG TACTAGTTGG 241 ATCGTCTTGA GGGTAACTAT AGGCATCAGG ACATCTTTGT TTGAAAAATC TTGACAATTC 301 AGTAGGACCA CATGGACCGT GATTACAACA ATATTGTTGT CCTCCGAATG TTGTACAAGG 361 GTTGTTACAT CCTCCAGGTA CCCTAAGTGA ACCAGGGCAT TCACCGTTTA TATTGGCTGT 421 GCATTGAATT GGATGACATT TTCCAGGGCC AGGCTTAGTT GGGCCAAAAG ACATAGGGAT 481 GTTGAATCCA TCAATAACAG AAATATCCCA AAAATCTAGG TTACCAAACT GGTTCAAAGC 541 GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG CAATCCAGGA CTCCACCACA 601 ATCACCAGTC TGGCACCAAC CTCTTCCAGC ACCATCAAAG TTGCAATTAG TACGACCCCA 661 AATACGTGC Predicted gene structure (within gDNA segment 9277 to 7399): Exon 1 8667 7999 ( 669 n); cDNA 1 669 ( 669 n); score: 0.989 MATCH C08HBa0235H18.1- SGN-E357464- 0.989 669 1.000 C PGS_C08HBa0235H18.1-_SGN-E357464- (8667 7999) Alignment (genomic DNA sequence = upper lines): AAGATAACAA ACTAAAAGAA ATGTGGATAA TACAAAAGAC AAGTAATGAA CAAAACTCAA 8608 |||||||||| |||||| || ||||||||| |||||||||| |||||||| | |||||||||| AAGATAACAA ACTAAAGAAA ATGTGGATAT TACAAAAGAC AAGTAATG-A CAAAACTCAA 59 -CCATTTTGA ACAAGAAAGA GGTGGCTACA CTCATGATGA ATCTACTTAT TAAGCAACTT 8549 ||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCATTTTGA NCAAGAAAGA GGTGGCTACA CTCATGATGA ATCTACTTAT TAAGCAACTT 119 CAAGAGTACT TGTAGGCATC TCCAATGGGA AATTTGTTGT TTCATTGTGA GTAGAGCCAT 8489 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGAGTACT TGTAGGCATC TCCAATGGGA AATTTGTTGT TTCATTGTGA GTAGAGCCAT 179 AAGGACAGAA CATTATCTTG TAGTCTGTAG TCCAACTCTG ACAAGTAAAA GTACTAGTTG 8429 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGACAGAA CATTATCTTG TAGTCTGTAG TCCAACTCTG ACAAGTAAAA GTACTAGTTG 239 GATCGTCTTG AGGGTAACTA TAGGCATCAG GACATCTTTG TTTGAAAAAT CTTGACAATT 8369 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATCGTCTTG AGGGTAACTA TAGGCATCAG GACATCTTTG TTTGAAAAAT CTTGACAATT 299 CAGTAGGACC ACATGGACCG TGATTACAAC AATATTGTTG TCCTCCGAAT GTTGTACAAG 8309 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGTAGGACC ACATGGACCG TGATTACAAC AATATTGTTG TCCTCCGAAT GTTGTACAAG 359 GGTTGTTACA TCCTCCAGGT ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTGGCTG 8249 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTTGTTACA TCCTCCAGGT ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTGGCTG 419 TGCATTGAAT TGGATGACAT TTTCCAGGGC CAGGCTTAGT TGGGCCAAAA GACATAGGGA 8189 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCATTGAAT TGGATGACAT TTTCCAGGGC CAGGCTTAGT TGGGCCAAAA GACATAGGGA 479 TGTTGAATCC ATCAATAACA GAAATATCCC AAAAATCTAG GTTACCAAAC TGGTTCAAAG 8129 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTGAATCC ATCAATAACA GAAATATCCC AAAAATCTAG GTTACCAAAC TGGTTCAAAG 539 CGTATTCAGC TAAGGTGTTT GGTGGTTTAC CCCATCCTTT GCAATCCAGG ACTCCACCAC 8069 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTATTCAGC TAAGGTGTTT GGTGGTTTAC CCCATCCTTT GCAATCCAGG ACTCCACCAC 599 AATCACCAGT CTGGCACCAA CCTCTTCCAG CACCATCAAA GTTGCAATTA GTACGACCCC 8009 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATCACCAGT CTGGCACCAA CCTCTTCCAG CACCATCAAA GTTGCAATTA GTACGACCCC 659 AAATACGTGC 7999 |||||||||| AAATACGTGC 669 hqPGS_C08HBa0235H18.1-_SGN-E357464- (8667 7999) ******************************************************************************** EST sequence 64 -strand 583 n (File: SGN-E351866-) 1 ACACTCATGA TGAATCTACT ATTNAAGCAC TTTCAAGAGT ACTTGTAGGC ATCTCCAATG 61 GGAAATTTGT TGTTTCATTG TGAGTAGAGC CATAAGGACA GAACATTATC TTGTAGTCTG 121 TAGTCCAACT CTGACAAGTA AAAGTACTAG TTGGATCGTC TTGAGGGTAA CTATAGGCAT 181 CAGGACATCT TTGTTTGAAA AATCTTGACA ATTCAGTAGG ACCACATGGA CCGTGATTAC 241 AACAATATTG TTGTCCTCCG AATGTTGTAC AAGGGTTGTT ACATCCTCCA GGTACCCTAA 301 GTGAACCAGG GCATTCACCG TTTATATTGG CTGTGCATTG AATTGGATGA CATTTTCCAG 361 GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA TCCATCAATA ACAGAAATAT 421 CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC AGCTAAGGTG TTTGGTGGTT 481 TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC AGTCTGGCAC CAACCTCTTC 541 CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG TGC Predicted gene structure (within gDNA segment 9191 to 7399): Exon 1 8581 7999 ( 583 n); cDNA 1 583 ( 583 n); score: 0.991 MATCH C08HBa0235H18.1- SGN-E351866- 0.991 583 1.000 C PGS_C08HBa0235H18.1-_SGN-E351866- (8581 7999) Alignment (genomic DNA sequence = upper lines): ACACTCATGA TGAATCTACT TATTAAGCAA CTTCAAGAGT ACTTGTAGGC ATCTCCAATG 8522 |||||||||| |||||||||| | ||||| ||||||||| |||||||||| |||||||||| ACACTCATGA TGAATCTACT ATTNAAGCAC TTTCAAGAGT ACTTGTAGGC ATCTCCAATG 60 GGAAATTTGT TGTTTCATTG TGAGTAGAGC CATAAGGACA GAACATTATC TTGTAGTCTG 8462 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAAATTTGT TGTTTCATTG TGAGTAGAGC CATAAGGACA GAACATTATC TTGTAGTCTG 120 TAGTCCAACT CTGACAAGTA AAAGTACTAG TTGGATCGTC TTGAGGGTAA CTATAGGCAT 8402 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGTCCAACT CTGACAAGTA AAAGTACTAG TTGGATCGTC TTGAGGGTAA CTATAGGCAT 180 CAGGACATCT TTGTTTGAAA AATCTTGACA ATTCAGTAGG ACCACATGGA CCGTGATTAC 8342 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGGACATCT TTGTTTGAAA AATCTTGACA ATTCAGTAGG ACCACATGGA CCGTGATTAC 240 AACAATATTG TTGTCCTCCG AATGTTGTAC AAGGGTTGTT ACATCCTCCA GGTACCCTAA 8282 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACAATATTG TTGTCCTCCG AATGTTGTAC AAGGGTTGTT ACATCCTCCA GGTACCCTAA 300 GTGAACCAGG GCATTCACCG TTTATATTGG CTGTGCATTG AATTGGATGA CATTTTCCAG 8222 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGAACCAGG GCATTCACCG TTTATATTGG CTGTGCATTG AATTGGATGA CATTTTCCAG 360 GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA TCCATCAATA ACAGAAATAT 8162 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA TCCATCAATA ACAGAAATAT 420 CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC AGCTAAGGTG TTTGGTGGTT 8102 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCAAAAATC TAGGTTACCA AACTGGTTCA AAGCGTATTC AGCTAAGGTG TTTGGTGGTT 480 TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC AGTCTGGCAC CAACCTCTTC 8042 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACCCCATCC TTTGCAATCC AGGACTCCAC CACAATCACC AGTCTGGCAC CAACCTCTTC 540 CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG TGC 7999 |||||||||| |||||||||| |||||||||| |||||||||| ||| CAGCACCATC AAAGTTGCAA TTAGTACGAC CCCAAATACG TGC 583 hqPGS_C08HBa0235H18.1-_SGN-E351866- (8581 7999) ******************************************************************************** EST sequence 557 +strand 781 n (File: SGN-E538598+) 1 TTTTTTTTTT TTTTTTTTTT TTTTTTTTTT TTTTTTTTTA ATTCAAATGC ACTGGTTGTT 61 TTATACATCT AAGACAAAAG TACACATGGA GATGTAACTC TTATTCCGGT CTTTAAGTTT 121 GTTACGAACT CTTATCAATA AAGTAAAAGT GAATATTTAA AAAACTGAGC TATTAAGATT 181 TTTCATTACG GGAGAGATCA GTTGACTAAT TGAGGCGATT TAAAATGAAG AAACTCAAAT 241 TCACTTGGCC ACTTCATCAG TACTTGCAGG CATCTCCAAG GGGAAATTTG GATCAGCAAC 301 ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT 361 TGTAGGATCG TCTTGGGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA 421 CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT 481 ACAAGGGTTG TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT 541 GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT 601 TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC 661 CAAGGCGTAC TCGGCTAGGG TGTTTTGGGG GTTTGCCCCA TCCGGTACAC TGTAAGACTC 721 CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG CAACCAGTAC 781 G Predicted gene structure (within gDNA segment 13452 to 4946): Exon 1 8555 8014 ( 542 n); cDNA 248 781 ( 534 n); score: 0.791 PPA cDNA 39 1 MATCH C08HBa0235H18.1- SGN-E538598+ 0.791 542 0.694 C PGS_C08HBa0235H18.1-_SGN-E538598+ (8555 8014) Alignment (genomic DNA sequence = upper lines): GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA 8496 || |||||| |||||||| |||||||||| || ||||||| ||| | || | | | | GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTG--G-ATC A--G-CA--A 299 GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA 8436 | |||| || |||| || | | | | ||| | |||| | | || | || |||||| || CA-CCATTAG GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA AGTAAATGTG 358 CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT GAAAAATCTT 8376 || || |||| ||||||| || ||| ||||| ||||| |||| |||||| || ||||||| | CTTGTAGGAT CGTCTTGGGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG 418 GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC TCCGAATGTT 8316 ||||| || | |||| ||||| |||||| || | ||||||| |||||||||| ||| || || GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG 478 GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC ACCGTTTATA 8256 |||||||||| |||||||||| |||||||||| |||| | | ||| ||||| ||| |||||| GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC ACCATTTATA 538 TTGGCTGTGC ATTGAATTGG ATGACATTTT CCAGGGCCAG GCTTAGTTGG GCCAAAAGAC 8196 ||||| |||| | ||||||| ||||||||| || | || | || ||||| | |||||| | TTGGCCGTGC AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC 598 ATAGGGATGT TGAATCCATC AATAACAGAA ATATCCCAAA AATCTAGGTT ACCAAACTGG 8136 || || || | | |||||||| | | |||| || ||||||| |||||| ||| | ||||||| ATTGGAATAT TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG 658 TTCAAAGCGT ATTCAGCTAA GGTG-TTTGG TGGTTTACCC CATCCTTTGC AATCCAGGAC 8077 | ||| |||| | || |||| |||| ||||| ||||| ||| ||||| | | | | | ||| TCCAAGGCGT ACTCGGCTAG GGTGTTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC 718 TCCACCACAA TCACCAGTCT GGCACCAACC TCTTCCAGCA CCATCAAAGT TGCAATTAGT 8017 |||||||||| |||||||||| | || ||| ||| || ||| ||| ||||| ||||| ||| TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT 778 ACG 8014 ||| ACG 781 hqPGS_C08HBa0235H18.1-_SGN-E538598+ (8555 8014) ******************************************************************************** EST sequence 272 -strand 736 n (File: SGN-E353136-) 1 TTTCAAATGC ACTGTTGTTT TATACATCTA AGACAAAAGT ACACATGAGA TGTAACTCTT 61 ATTCCGGTCT TTAAGTTTGT TACGAACTCT TATCAATAAA GTAAAAGTGA ATATTTAAAA 121 AACTGAGCTA TTAAGATTTT TCATTACGGT AGAGATCAGT TGACTAATTG AGGCGATTTA 181 AAATGAAGAA ACTCAAATTC ACTTGGCCAC TTCATCAGTA CTTGCAGGCA TCTCCAAGGG 241 GAAATTTGGA TCAGCAACAC CATTAGGACA AAAGACAACC CTATAGTTTG TACTACCACC 301 AGGGCAAGTA AATGTGCTTG TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT 361 TTTCTTGAAA AATTTGGACA ACTCTGTAGG GCCACATGGA CCTTGGGTGC AACAATATTG 421 TTGTCCTCCA AACGTGGTAC AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG 481 ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT 541 TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC 601 TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC 661 GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 721 AAAGTTGCAA CCAGTG Predicted gene structure (within gDNA segment 13042 to 4986): Exon 1 8555 8017 ( 539 n); cDNA 206 735 ( 530 n); score: 0.794 MATCH C08HBa0235H18.1- SGN-E353136- 0.794 539 0.732 C PGS_C08HBa0235H18.1-_SGN-E353136- (8555 8017) Alignment (genomic DNA sequence = upper lines): GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA 8496 || |||||| |||||||| |||||||||| || ||||||| ||| | || | | | | GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTG--G-ATC A--G-CA--A 257 GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA 8436 | |||| || |||| || | | | | ||| | |||| | | || | || |||||| || CA-CCATTAG GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA AGTAAATGTG 316 CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT GAAAAATCTT 8376 || || |||| ||||||| || ||| ||||| ||||| |||| |||||| || ||||||| | CTTGTAGGAT CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG 376 GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC TCCGAATGTT 8316 ||||| || | |||| ||||| |||||| || | ||||||| |||||||||| ||| || || GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG 436 GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC ACCGTTTATA 8256 |||||||||| |||||||||| |||||||||| |||| | | ||| ||||| ||| |||||| GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC ACCATTTATA 496 TTGGCTGTGC ATTGAATTGG ATGACATTTT CCAGGGCCAG GCTTAGTTGG GCCAAAAGAC 8196 ||||| |||| | ||||||| ||||||||| || | || | || ||||| | |||||| | TTGGCCGTGC AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC 556 ATAGGGATGT TGAATCCATC AATAACAGAA ATATCCCAAA AATCTAGGTT ACCAAACTGG 8136 || || || | | |||||||| | | |||| || ||||||| |||||| ||| | ||||||| ATTGGAATAT TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG 616 TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA ATCCAGGACT 8076 | ||| |||| | || |||| ||||||||| ||||| |||| |||| | || | | |||| TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT 676 CCACCACAAT CACCAGTCTG GCACCAACCT CTTCCAGCAC CATCAAAGTT GCAATTAGT 8017 |||||||||| |||||||||| || |||| || || ||| ||| |||||| |||| ||| CCACCACAAT CACCAGTCTG ACATGTACCT CTGCCTGCAG CATTAAAGTT GCAACCAGT 735 hqPGS_C08HBa0235H18.1-_SGN-E353136- (8555 8017) ******************************************************************************** EST sequence 163 -strand 426 n (File: SGN-E203547-) 1 GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 61 AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 121 CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 181 CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 241 GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 301 CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 361 TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 421 CAACCA Predicted gene structure (within gDNA segment 9972 to 5016): Exon 1 8444 8022 ( 423 n); cDNA 1 423 ( 423 n); score: 0.820 MATCH C08HBa0235H18.1- SGN-E203547- 0.820 423 0.993 C PGS_C08HBa0235H18.1-_SGN-E203547- (8444 8022) Alignment (genomic DNA sequence = upper lines): GTAAAAGTAC TAGTTGGATC GTCTTGAGGG TAACTATAGG CATCAGGACA TCTTTGTTTG 8385 ||||| || | | || ||||| |||||| ||| || ||||| | |||| ||||| ||||| ||| GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 60 AAAAATCTTG ACAATTCAGT AGGACCACAT GGACCGTGAT TACAACAATA TTGTTGTCCT 8325 |||||| | | |||| || || ||| |||||| ||||| || | |||||||| |||||||||| AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 120 CCGAATGTTG TACAAGGGTT GTTACATCCT CCAGGTACCC TAAGTGAACC AGGGCATTCA 8265 || || || | |||||||||| |||||||||| ||||||||| |||| | | ||| |||||| CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 180 CCGTTTATAT TGGCTGTGCA TTGAATTGGA TGACATTTTC CAGGGCCAGG CTTAGTTGGG 8205 || ||||||| |||| ||||| ||||||| |||||||||| | | ||| || |||||| CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 240 CCAAAAGACA TAGGGATGTT GAATCCATCA ATAACAGAAA TATCCCAAAA ATCTAGGTTA 8145 |||||| || | || || || |||||||| | | ||||| | |||||||| ||||| ||| GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 300 CCAAACTGGT TCAAAGCGTA TTCAGCTAAG GTGTTTGGTG GTTTACCCCA TCCTTTGCAA 8085 | |||||||| ||| ||||| || |||| | |||||||| | |||| ||||| ||| | || CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 360 TCCAGGACTC CACCACAATC ACCAGTCTGG CACCAACCTC TTCCAGCACC ATCAAAGTTG 8025 | | ||||| |||||||||| ||||||||| || ||||| | || ||| | || ||||||| TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 420 CAA 8022 ||| CAA 423 hqPGS_C08HBa0235H18.1-_SGN-E203547- (8444 8022) ******************************************************************************** EST sequence 38 -strand 645 n (File: SGN-E350938-) 1 AAGATAACAA ACTAAAAGAA ATGTGGATAA TACAAAAGAC AAGTAATGAA CAAAACTCAA 61 CCATTTTGAA CAAGAAAGAG GTGGCTACAC TCATGATGAA TCTACTTATT AAGCAACTTC 121 AAGAGTACTT GTAGGCATCT CCAATGGGAA ATTTGTTGTT TCATTGTGAG TAGAGCCATA 181 AGGACAGAAC ATTATCTTGT AGTCTGTAGT CCAACTCTGA CAAGTAAAAG TACTAGTTGG 241 ATCGTCTTGA GGGTAACTAT AGGCATCAGG ACATCTTTGT TTGAAAAATC TTGACAATTC 301 AGTAGGACCA CATGGACCGT GATTACAACA ATATTGTTGT CCTCCGAATG TTGTACAAGG 361 GTTGTTACAT CCTCCAGGTA CCCTAAGTGA ACCAGGGCAT TCACCGTTTA TATTGGCTGT 421 GCATTGAATT GGATGACATT TTCCAGGGCC AGGCTTAGTT GGGCCAAAAG ACATAGGGAT 481 GTTGAATCCA TCAATAACAG AAATATCCCA AAAATCTAGG TTACCAAACT GGTTCAAAGC 541 GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG CAATCCAGGA CTCCACCACA 601 ATCACCAGTC TGGCACCAAC CTCTTCCAGC ACCATCAAAG TTGCA Predicted gene structure (within gDNA segment 9277 to 7423): Exon 1 8667 8023 ( 645 n); cDNA 1 645 ( 645 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E350938- 1.000 645 1.000 C PGS_C08HBa0235H18.1-_SGN-E350938- (8667 8023) Alignment (genomic DNA sequence = upper lines): AAGATAACAA ACTAAAAGAA ATGTGGATAA TACAAAAGAC AAGTAATGAA CAAAACTCAA 8608 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGATAACAA ACTAAAAGAA ATGTGGATAA TACAAAAGAC AAGTAATGAA CAAAACTCAA 60 CCATTTTGAA CAAGAAAGAG GTGGCTACAC TCATGATGAA TCTACTTATT AAGCAACTTC 8548 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATTTTGAA CAAGAAAGAG GTGGCTACAC TCATGATGAA TCTACTTATT AAGCAACTTC 120 AAGAGTACTT GTAGGCATCT CCAATGGGAA ATTTGTTGTT TCATTGTGAG TAGAGCCATA 8488 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGAGTACTT GTAGGCATCT CCAATGGGAA ATTTGTTGTT TCATTGTGAG TAGAGCCATA 180 AGGACAGAAC ATTATCTTGT AGTCTGTAGT CCAACTCTGA CAAGTAAAAG TACTAGTTGG 8428 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGACAGAAC ATTATCTTGT AGTCTGTAGT CCAACTCTGA CAAGTAAAAG TACTAGTTGG 240 ATCGTCTTGA GGGTAACTAT AGGCATCAGG ACATCTTTGT TTGAAAAATC TTGACAATTC 8368 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCGTCTTGA GGGTAACTAT AGGCATCAGG ACATCTTTGT TTGAAAAATC TTGACAATTC 300 AGTAGGACCA CATGGACCGT GATTACAACA ATATTGTTGT CCTCCGAATG TTGTACAAGG 8308 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTAGGACCA CATGGACCGT GATTACAACA ATATTGTTGT CCTCCGAATG TTGTACAAGG 360 GTTGTTACAT CCTCCAGGTA CCCTAAGTGA ACCAGGGCAT TCACCGTTTA TATTGGCTGT 8248 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGTTACAT CCTCCAGGTA CCCTAAGTGA ACCAGGGCAT TCACCGTTTA TATTGGCTGT 420 GCATTGAATT GGATGACATT TTCCAGGGCC AGGCTTAGTT GGGCCAAAAG ACATAGGGAT 8188 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCATTGAATT GGATGACATT TTCCAGGGCC AGGCTTAGTT GGGCCAAAAG ACATAGGGAT 480 GTTGAATCCA TCAATAACAG AAATATCCCA AAAATCTAGG TTACCAAACT GGTTCAAAGC 8128 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGAATCCA TCAATAACAG AAATATCCCA AAAATCTAGG TTACCAAACT GGTTCAAAGC 540 GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG CAATCCAGGA CTCCACCACA 8068 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG CAATCCAGGA CTCCACCACA 600 ATCACCAGTC TGGCACCAAC CTCTTCCAGC ACCATCAAAG TTGCA 8023 |||||||||| |||||||||| |||||||||| |||||||||| ||||| ATCACCAGTC TGGCACCAAC CTCTTCCAGC ACCATCAAAG TTGCA 645 hqPGS_C08HBa0235H18.1-_SGN-E350938- (8667 8023) ******************************************************************************** EST sequence 63 -strand 567 n (File: SGN-E252885-) 1 ATTACGGTAG AGATCAGTTG ACTAATTGAG GCGATTTAAA ATGAAGAAAC TCAAATTCAC 61 TTGGCCACTT CATCAGTACT TGCAGGCATC TCCAAGGGGA AATTTGGATC AGCAACACCA 121 TTAGGACAAA AGACAACCCT ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA 181 GGATCGTCTT GTGGGTAGCT ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC 241 TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA 301 GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC 361 GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 421 ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 481 GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 541 CAATCACCAG TATGACATGT ACCTCTG Predicted gene structure (within gDNA segment 11622 to 5256): Exon 1 8552 8044 ( 509 n); cDNA 67 566 ( 500 n); score: 0.794 MATCH C08HBa0235H18.1- SGN-E252885- 0.794 509 0.898 C PGS_C08HBa0235H18.1-_SGN-E252885- (8552 8044) Alignment (genomic DNA sequence = upper lines): ACTTCAAGAG TACTTGTAGG CATCTCCAAT GGGAAATTTG TTGTTTCATT GTGAGTAGAG 8493 |||||| || |||||| ||| ||||||||| |||||||||| | ||| | | | | ACTTCATCAG TACTTGCAGG CATCTCCAAG GGGAAATTTG --G-ATCA-- G-CA--ACA- 117 CCATAAGGAC AGAACATTAT CTTGTAGTCT GTAGTCCAAC TCTGACAAGT AAAAGTACTA 8433 |||| ||||| | || | | | | |||| | ||| | | || | ||||| ||| || || CCATTAGGAC AAAAGACAAC CCTATAGTTT GTACTACCAC CAGGGCAAGT AAATGTGCTT 177 GTTGGATCGT CTTGAGGGTA ACTATAGGCA TCAGGACATC TTTGTTTGAA AAATCTTGAC 8373 || ||||||| |||| ||||| ||||| ||| || ||||||| ||| ||||| |||| | ||| GTAGGATCGT CTTGTGGGTA GCTATAAGCA TCGGGACATC TTTTCTTGAA AAATTTGGAC 237 AATTCAGTAG GACCACATGG ACCGTGATTA CAACAATATT GTTGTCCTCC GAATGTTGTA 8313 || || |||| | |||||||| ||| || | |||||||||| |||||||||| || || ||| AACTCTGTAG GGCCACATGG ACCTTGGGTG CAACAATATT GTTGTCCTCC AAACGTGGTA 297 CAAGGGTTGT TACATCCTCC AGGTACCCTA AGTGAACCAG GGCATTCACC GTTTATATTG 8253 |||||||||| |||||||||| ||||||| || || | | || | |||||||| ||||||||| CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC ATTTATATTG 357 GCTGTGCATT GAATTGGATG ACATTTTCCA GGGCCAGGCT TAGTTGGGCC AAAAGACATA 8193 || ||||| | |||||| || ||||||||| | ||| | | |||||| | ||||| ||| GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC AAAAGTCATT 417 GGGATGTTGA ATCCATCAAT AACAGAAATA TCCCAAAAAT CTAGGTTACC AAACTGGTTC 8133 || || || | ||||||| | | |||||| |||||||||| ||| ||| | |||||||| | GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT AAACTGGTCC 477 AAAGCGTATT CAGCTAAGGT GTTTGGTGGT TTACCCCATC CTTTGCAATC CAGGACTCCA 8073 || ||||| | | |||| ||| |||||| ||| || ||||||| | | || | | ||||||| AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG TAAGACTCCA 537 CCACAATCAC CAGTCTGGCA CCAACCTCT 8044 |||||||||| |||| || || |||||| CCACAATCAC CAGTATGACA TGTACCTCT 566 hqPGS_C08HBa0235H18.1-_SGN-E252885- (8552 8044) ******************************************************************************** EST sequence 309 -strand 389 n (File: SGN-E206738-) 1 TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT TTTCTTGAAA AATTTGGACA 61 ACTCTGTAGG GCCACATGGA CATTGGGTGC AACAATATTG TTGTCCTCCA AACGTGGTAC 121 AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG ACATTCACCA TTTATATTGC 181 CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT TGTTGGGGCA AAAGTCATTG 241 GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA AACTGGTCCA 301 AGGCGTACTC GGTTAGGGTG TTTGGGGGTT TGCCCCATCC GGTACACTGT AAGACTCCAC 361 CACAATCACC AGTGTGACAT GTACCTCTG Predicted gene structure (within gDNA segment 9842 to 5256): Exon 1 8429 8044 ( 386 n); cDNA 3 388 ( 386 n); score: 0.813 MATCH C08HBa0235H18.1- SGN-E206738- 0.813 386 0.992 C PGS_C08HBa0235H18.1-_SGN-E206738- (8429 8044) Alignment (genomic DNA sequence = upper lines): GGATCGTCTT GAGGGTAACT ATAGGCATCA GGACATCTTT GTTTGAAAAA TCTTGACAAT 8370 |||||||||| | ||||| || ||| ||||| |||||||||| |||||||| | | ||||| GGATCGTCTT GTGGGTAGCT ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC 62 TCAGTAGGAC CACATGGACC GTGATTACAA CAATATTGTT GTCCTCCGAA TGTTGTACAA 8310 || ||||| | ||||||||| || | ||| |||||||||| ||||||| || || |||||| TCTGTAGGGC CACATGGACA TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA 122 GGGTTGTTAC ATCCTCCAGG TACCCTAAGT GAACCAGGGC ATTCACCGTT TATATTGGCT 8250 |||||||||| |||||||||| |||| |||| | | ||| | ||||||| || ||||||| | GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGCCC 182 GTGCATTGAA TTGGATGACA TTTTCCAGGG CCAGGCTTAG TTGGGCCAAA AGACATAGGG 8190 ||||| |||| ||| ||||| |||||| | ||| || | ||||| |||| || ||| || GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 242 ATGTTGAATC CATCAATAAC AGAAATATCC CAAAAATCTA GGTTACCAAA CTGGTTCAAA 8130 || || |||| |||| | | |||||| ||| |||||||||| ||| | ||| ||||| ||| ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 302 GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT TGCAATCCAG GACTCCACCA 8070 ||||| || | || |||||| ||| ||||| |||||||| | || | | |||||||||| GCGTACTCGG TTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 362 CAATCACCAG TCTGGCACCA ACCTCT 8044 |||||||||| | || || |||||| CAATCACCAG TGTGACATGT ACCTCT 388 hqPGS_C08HBa0235H18.1-_SGN-E206738- (8429 8044) ******************************************************************************** EST sequence 661 +strand 734 n (File: SGN-E373165+) 1 CCTCGAGAGA ACTAGTCACG AGTTTTTTTT TTTTTTTTTT TCAATTTAAA ATTAAAATAC 61 CATATATAAG ACAAAGCATC GATCATAGAT TGTTATTCAA ATCTTAGCCA CTTCAAACAA 121 ACAAATGTAA AAAAAATGTG TACAAGGCAA ATTAAAGACA ATGTCCATCT TCAAAACAAA 181 TTTAACAAAA AAGAGATTGG CTCAACTCAA GATTTCTACT TAATTAAGCC ACTTCAAGAG 241 TATTTGTAGG AATCTCCAAT GGGAAATTTG TTGTTTCATT GTGAGTAGAG CCATAAGGAC 301 AAAACATAAC CTTGTAGTCT GTAGTCCAAC TCTGACAAGT AAAAGTACTT GTTGGATCGT 361 CTTGAGGATA ACTATAGGCA TCGGGACATC TTTGTTTGAA AAATCTTGAC AAATCGGTAG 421 GACCACATGG ACCTTGAGTG CAACAATATT GTTGTCCTCC GAATGTAGTA CAAGGGTTGT 481 TACATCCTCC GGGTACCCTA AGTGAACCAG GGCATTCACC GTTTATATTA GCAACACATT 541 GAATTGGATG ACATTTTCCC GGCCCAGGGT TAGTTGGGCC GAAAGACATA GGGATGTTGA 601 ATCCATCAAT AACAGAAATG TCCCAGAAAT CTAAGTTGCT AAATTGATTC AAAGCGTATT 661 CAGCTAAGGT GTTTGGTGGT TTACCCCATC CTTTGCATTC CAAGACTCCA CCACAATCAC 721 CGGTCTGGCA CCAA Predicted gene structure (within gDNA segment 11641 to 7322): Exon 1 10236 10229 ( 8 n); cDNA 80 87 ( 8 n); score: 0.500 Intron 1 10228 8696 (1533 n); Pd: 0.587 (s: 0), Pa: 0.000 (s: 0.77) Exon 2 8695 8049 ( 647 n); cDNA 88 734 ( 647 n); score: 0.874 PPA cDNA 41 22 MATCH C08HBa0235H18.1- SGN-E373165+ 0.874 655 0.892 C PGS_C08HBa0235H18.1-_SGN-E373165+ (10236 10229,8695 8049) Alignment (genomic DNA sequence = upper lines): CGAAAAAGGC GAACGAATTA TACAATTGCA GTGAAATACA ATTTTCTCTT GCTTTATACA 10177 ||| | CGATCATA.. .......... .......... .......... .......... .......... 87 ACAGAAGTGT ATAAATTGTG TTTATGTTTT TGTATAAAGC GAGAGAAAAA CATATATTTT 10117 .......... .......... .......... .......... .......... .......... 87 TTTCCTATAC ACTTATAATT ATGCAATATA CATACATTTT ACTTCGATTC AATTGTATGC 10057 .......... .......... .......... .......... .......... .......... 87 AAAATAAATT TTATACAAAT ATTGCAGAGA ATTATACAAT ATGCATTATA CAATTGCAGT 9997 .......... .......... .......... .......... .......... .......... 87 GAAATATGAT AGCGAATTAT ACAATTGCGG CGAAATAGGC CAGCAAATTA TACAATTGTA 9937 .......... .......... .......... .......... .......... .......... 87 TATTATAGTG AATTATACAG TTTTATGTTT GCTATGGAGC GTAATTATAC AAATTTTGCT 9877 .......... .......... .......... .......... .......... .......... 87 ATAACACACA AATATAAATT TTTTATTTGC TATATGCGAA AGTTGTCCTA AAACAATTAA 9817 .......... .......... .......... .......... .......... .......... 87 CAACATTACT CTTGAAAATA ATATTCTTTT GTCAATATAG TAAGTAATGA TGAATAATTA 9757 .......... .......... .......... .......... .......... .......... 87 TTTAACCACC AAAGTAACAT AAAAAACCCC ACTCACCAAT ATCTCCATAT ACCCCCATTT 9697 .......... .......... .......... .......... .......... .......... 87 TCTTGACTTT TTTGAGTGTA GATACACATA CGTTTTTCTT TTAATTATAT ATCCACTTGA 9637 .......... .......... .......... .......... .......... .......... 87 CACATGACAT ATTTTTTTAT AATAATGGCG TGGAGTTAAA AAGTTTACGT AATGTGAATT 9577 .......... .......... .......... .......... .......... .......... 87 TAAATTATTA AGTTAAGTTT TAAGAAAAAA AAGAGTGAAA TTATTTGAAC ATATTTTGTT 9517 .......... .......... .......... .......... .......... .......... 87 AATGATCAGT TATTTCAAAT AAAACATGAT AAATATTTTA AAATGAATTG AATATTATGG 9457 .......... .......... .......... .......... .......... .......... 87 TGCTAAGGAC TTTGCTTCTT ATTATCAGGA GTGATTGCAT AAAAGTCACG GAATATGCAC 9397 .......... .......... .......... .......... .......... .......... 87 CATAACGTGC TGAAAATATG CAAAGGGGCT GTGGTGGGAT GTTAGTTTTC AATTTTTAAT 9337 .......... .......... .......... .......... .......... .......... 87 TTGATATATC GAGTTTGAGC CATGAGAGTA AATTTCTTTT CATTATATAT AATAAGTGTT 9277 .......... .......... .......... .......... .......... .......... 87 TTGCCTTCAA AGTGAAATTT TTCGAATGCA AATTTAAATT TATCAAGCTC AATACAAATG 9217 .......... .......... .......... .......... .......... .......... 87 TTGAATATCA AGAGCATGAT TAATAGCGGA GTAATAATTT TCATTAGAGG ATTTTGAAAT 9157 .......... .......... .......... .......... .......... .......... 87 ATGAGAAAAT AAACACACTA ACAATTTAAA GAAAAAAAAA ATTCATTCAT TAATTAATCA 9097 .......... .......... .......... .......... .......... .......... 87 CTGTATATAC ATTAAAAATA ATTTTAACTA TATATAAATA AAATTAATAA TTATCTATTT 9037 .......... .......... .......... .......... .......... .......... 87 AAAAAATTGA ATAAACCCCT TAATTCTACG TGGCTCCACC TTAACCTTTG CATGAAATAT 8977 .......... .......... .......... .......... .......... .......... 87 TCTAAAAGCC GCCTACAAAA AAGATTTCCA CCTCGACTAA TTATTATGTC CTATAAAGAT 8917 .......... .......... .......... .......... .......... .......... 87 AGCTATCCTA TATAGTAATT ATAATAGTTT ATCTTGTCCC TACAATTTTA TATTTTTGAT 8857 .......... .......... .......... .......... .......... .......... 87 CTGATTACGG TAGAATGTTA TCAATACTAT TTTTCATTCC TTTTTTTGTC TAAGGTTTAA 8797 .......... .......... .......... .......... .......... .......... 87 GACTTAGATA ATTAGGAATT AAAAAGACAA AATTAAACGA TACTCCAAAT GCACTCTTGT 8737 .......... .......... .......... .......... .......... .......... 87 GTGAGAATTT TGAACATCAT GTGTAAGACA AATTAAAGTA CAATATGTTA TTGAAATCTT 8677 || ||||| || ||||||| .......... .......... .......... .......... .GAT-TGTTA TTCAAATCTT 105 AGCCACCTCA AGATAACAAA -CTAAAAGAA ATGTGGATAA TACAAAAGAC AAGTAATGAA 8618 |||||| ||| | |||||| ||||| || ||||| | || |||| | | |||| AGCCACTTCA AACAAACAAA TGTAAAAAAA ATGTGTACAA GGCAAATTAA AGACAATGTC 165 CAAAACTCAA CCATTTTGAA CAAGAAAGAG G-TGGCTACA CTCATGATGA ATCTACTT-A 8560 || || || || || ||| |||||| ||||| | |||| ||| ||||||| | CATCTTCAAA ACAAATTTAA CAAAAAAGAG ATTGGCTCAA CTCAAGAT-- TTCTACTTAA 223 TTAAGCAACT TCAAGAGTAC TTGTAGGCAT CTCCAATGGG AAATTTGTTG TTTCATTGTG 8500 |||||| ||| ||||||||| ||||||| || |||||||||| |||||||||| |||||||||| TTAAGCCACT TCAAGAGTAT TTGTAGGAAT CTCCAATGGG AAATTTGTTG TTTCATTGTG 283 AGTAGAGCCA TAAGGACAGA ACATTATCTT GTAGTCTGTA GTCCAACTCT GACAAGTAAA 8440 |||||||||| |||||||| | |||| | ||| |||||||||| |||||||||| |||||||||| AGTAGAGCCA TAAGGACAAA ACATAACCTT GTAGTCTGTA GTCCAACTCT GACAAGTAAA 343 AGTACTAGTT GGATCGTCTT GAGGGTAACT ATAGGCATCA GGACATCTTT GTTTGAAAAA 8380 |||||| ||| |||||||||| |||| ||||| ||||||||| |||||||||| |||||||||| AGTACTTGTT GGATCGTCTT GAGGATAACT ATAGGCATCG GGACATCTTT GTTTGAAAAA 403 TCTTGACAAT TCAGTAGGAC CACATGGACC GTGATTACAA CAATATTGTT GTCCTCCGAA 8320 ||||||||| || ||||||| |||||||||| ||| | ||| |||||||||| |||||||||| TCTTGACAAA TCGGTAGGAC CACATGGACC TTGAGTGCAA CAATATTGTT GTCCTCCGAA 463 TGTTGTACAA GGGTTGTTAC ATCCTCCAGG TACCCTAAGT GAACCAGGGC ATTCACCGTT 8260 ||| |||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| TGTAGTACAA GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GAACCAGGGC ATTCACCGTT 523 TATATTGGCT GTGCATTGAA TTGGATGACA TTTTCCAGGG CCAGGCTTAG TTGGGCCAAA 8200 |||||| || ||||||| |||||||||| |||||| || ||||| |||| ||||||| || TATATTAGCA ACACATTGAA TTGGATGACA TTTTCCCGGC CCAGGGTTAG TTGGGCCGAA 583 AGACATAGGG ATGTTGAATC CATCAATAAC AGAAATATCC CAAAAATCTA GGTTACCAAA 8140 |||||||||| |||||||||| |||||||||| |||||| ||| || ||||||| ||| | ||| AGACATAGGG ATGTTGAATC CATCAATAAC AGAAATGTCC CAGAAATCTA AGTTGCTAAA 643 CTGGTTCAAA GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT TGCAATCCAG 8080 || |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| |||| TTGATTCAAA GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT TGCATTCCAA 703 GACTCCACCA CAATCACCAG TCTGGCACCA A 8049 |||||||||| |||||||| | |||||||||| | GACTCCACCA CAATCACCGG TCTGGCACCA A 734 hqPGS_C08HBa0235H18.1-_SGN-E373165+ (8695 8049) ******************************************************************************** EST sequence 150 -strand 710 n (File: SGN-E373166-) 1 TTTTTTTTTT TTTTTTTCAA TTTAAAAATT AAAATCCCAT ATATAAGACA AAGCATCGAT 61 CATAGATTGT TATTCAGATC TTAGCCACTT CAAACAAACA AATGTAAAAG AAATGTGTAC 121 AAGGCAAATT AAAGACAATG TCCATCTTCA AAACAAATTT AACAAAAAAG AGATTGGCTC 181 AACTCAAGAT TTCTACTTAA TTAAGCCACT TCAAGAGTAT TTGTAGGAAT CTCCAATGGG 241 AAATTTGTTG TTTCATTGTG AGTAGAGCCA TAAGGACAAA ACATAACCTT GTAGTCTGTA 301 GTCCAACTCT GACAAGTAAA AGTACTTGTT GGATCGTCTT GAGGATAACT ATAGGCATCG 361 GGACATCTTT GTTTGAAAAA TCTTGACAAA TCGGTAGGAC CACATGGACC TTGAGTGCAA 421 CAATATTGTT GTCCTCCGAA TGTAGTACAA GGGTTGTTAC ATCCTCCGGG TACCCTAAGT 481 GAACCAGGGC ATTCACCGTT TATATTAGCA ACACATTGAA TTGGATGACA TTTTCCCGGC 541 CCAGGGTTAG TTGGGCCGAA AGACATAGGG ATGTTGAATC CATCAATAAC AGAAATGTCC 601 CAGAAATCTA AGTTGCTAAA TTGATTCAAA GCGTATTCAG CTAAGGTGTT TGGTGGTTTA 661 CCCCATCCTT TGCATTCCAA GACTCCACCA CAATCACCGG TCTGGCACCA Predicted gene structure (within gDNA segment 11421 to 7342): Exon 1 8691 8050 ( 642 n); cDNA 68 710 ( 643 n); score: 0.876 PPA cDNA 17 1 MATCH C08HBa0235H18.1- SGN-E373166- 0.876 642 0.904 C PGS_C08HBa0235H18.1-_SGN-E373166- (8691 8050) Alignment (genomic DNA sequence = upper lines): TGTTATTGAA ATCTTAGCCA CCTCAAGATA ACAAA-CTAA AAGAAATGTG GATAATACAA 8633 ||||||| | |||||||||| | |||| | ||||| ||| |||||||||| | || ||| TGTTATTCAG ATCTTAGCCA CTTCAAACAA ACAAATGTAA AAGAAATGTG TACAAGGCAA 127 AAGACAAGTA ATGAACAAAA CTCAACCATT TTGAACAAGA AAGAGGT-GG CTACACTCAT 8574 | | | | ||| || || || || ||||| | ||||| | || || ||||| ATTAAAGACA ATGTCCATCT TCAAAACAAA TTTAACAAAA AAGAGATTGG CTCAACTCAA 187 GATGAATCTA CTT-ATTAAG CAACTTCAAG AGTACTTGTA GGCATCTCCA ATGGGAAATT 8515 ||| |||| ||| |||||| | |||||||| |||| ||||| || ||||||| |||||||||| GAT--TTCTA CTTAATTAAG CCACTTCAAG AGTATTTGTA GGAATCTCCA ATGGGAAATT 245 TGTTGTTTCA TTGTGAGTAG AGCCATAAGG ACAGAACATT ATCTTGTAGT CTGTAGTCCA 8455 |||||||||| |||||||||| |||||||||| ||| ||||| | |||||||| |||||||||| TGTTGTTTCA TTGTGAGTAG AGCCATAAGG ACAAAACATA ACCTTGTAGT CTGTAGTCCA 305 ACTCTGACAA GTAAAAGTAC TAGTTGGATC GTCTTGAGGG TAACTATAGG CATCAGGACA 8395 |||||||||| |||||||||| | |||||||| ||||||||| |||||||||| |||| ||||| ACTCTGACAA GTAAAAGTAC TTGTTGGATC GTCTTGAGGA TAACTATAGG CATCGGGACA 365 TCTTTGTTTG AAAAATCTTG ACAATTCAGT AGGACCACAT GGACCGTGAT TACAACAATA 8335 |||||||||| |||||||||| |||| || || |||||||||| ||||| ||| | |||||||| TCTTTGTTTG AAAAATCTTG ACAAATCGGT AGGACCACAT GGACCTTGAG TGCAACAATA 425 TTGTTGTCCT CCGAATGTTG TACAAGGGTT GTTACATCCT CCAGGTACCC TAAGTGAACC 8275 |||||||||| |||||||| | |||||||||| |||||||||| || ||||||| |||||||||| TTGTTGTCCT CCGAATGTAG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGAACC 485 AGGGCATTCA CCGTTTATAT TGGCTGTGCA TTGAATTGGA TGACATTTTC CAGGGCCAGG 8215 |||||||||| |||||||||| | || || |||||||||| |||||||||| | || ||||| AGGGCATTCA CCGTTTATAT TAGCAACACA TTGAATTGGA TGACATTTTC CCGGCCCAGG 545 CTTAGTTGGG CCAAAAGACA TAGGGATGTT GAATCCATCA ATAACAGAAA TATCCCAAAA 8155 ||||||||| || ||||||| |||||||||| |||||||||| |||||||||| | ||||| || GTTAGTTGGG CCGAAAGACA TAGGGATGTT GAATCCATCA ATAACAGAAA TGTCCCAGAA 605 ATCTAGGTTA CCAAACTGGT TCAAAGCGTA TTCAGCTAAG GTGTTTGGTG GTTTACCCCA 8095 ||||| ||| | ||| || | |||||||||| |||||||||| |||||||||| |||||||||| ATCTAAGTTG CTAAATTGAT TCAAAGCGTA TTCAGCTAAG GTGTTTGGTG GTTTACCCCA 665 TCCTTTGCAA TCCAGGACTC CACCACAATC ACCAGTCTGG CACCA 8050 ||||||||| |||| ||||| |||||||||| ||| |||||| ||||| TCCTTTGCAT TCCAAGACTC CACCACAATC ACCGGTCTGG CACCA 710 hqPGS_C08HBa0235H18.1-_SGN-E373166- (8691 8050) ******************************************************************************** EST sequence 195 -strand 547 n (File: SGN-E291342-) 1 AAAAAAGAGA TTGGCTCAAC TCAAGATTTC TACTTAATTA AGCCACTTCA AGAGTATTTG 61 TAGGAATCTC CAATGGGAAA TTTGTTGTTT CATTGTGAGT AGAGCCATAA GGACAAAACA 121 TAACCTTGTA GTCTGTAGTC CAACTCTGAC AAGTAAAAGT ACTTGTTGGA TCGTCTTGAG 181 GATAACTATA GGCATCGGGA CATCTTTGTT TGAAAAATCT TGACAAATCG GTAGGACCAC 241 ATGGACCTTG AGTGCAACAA TATTGTTGTC CTCCGAATGT AGTACAAGGG TTGTTACATC 301 CTCCGGGTAC CCTAAGTGAA CCAGGGCATT CACCGTTTAT ATTAGCAACA CATTGAATTG 361 GATGACATTT TCCCGGCCCA GGGTTAGTTG GGCCGAAAGA CATAGGGATG TTGAATCCAT 421 CAATAACAGA AATGTCCCAG AAATCTAAGT TGCTAAATTG ATTCAAAGCG TATTCAGCTA 481 AGGTGTTTGG TGGTTTACCC CATCCTTTGC ATTCCAAGAC TCCACCACAA TCACCGGTCT 541 GGCACCA Predicted gene structure (within gDNA segment 9791 to 7342): Exon 1 8596 8050 ( 547 n); cDNA 1 547 ( 547 n); score: 0.912 MATCH C08HBa0235H18.1- SGN-E291342- 0.912 547 1.000 C PGS_C08HBa0235H18.1-_SGN-E291342- (8596 8050) Alignment (genomic DNA sequence = upper lines): AAGAAAGAG- GTGGCTACAC TCATGATGAA TCTACTT-AT TAAGCAACTT CAAGAGTACT 8539 || |||||| ||||| || ||| ||| ||||||| || ||||| |||| |||||||| | AAAAAAGAGA TTGGCTCAAC TCAAGAT--T TCTACTTAAT TAAGCCACTT CAAGAGTATT 58 TGTAGGCATC TCCAATGGGA AATTTGTTGT TTCATTGTGA GTAGAGCCAT AAGGACAGAA 8479 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || TGTAGGAATC TCCAATGGGA AATTTGTTGT TTCATTGTGA GTAGAGCCAT AAGGACAAAA 118 CATTATCTTG TAGTCTGTAG TCCAACTCTG ACAAGTAAAA GTACTAGTTG GATCGTCTTG 8419 ||| | |||| |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| CATAACCTTG TAGTCTGTAG TCCAACTCTG ACAAGTAAAA GTACTTGTTG GATCGTCTTG 178 AGGGTAACTA TAGGCATCAG GACATCTTTG TTTGAAAAAT CTTGACAATT CAGTAGGACC 8359 ||| |||||| |||||||| | |||||||||| |||||||||| |||||||| | | |||||||| AGGATAACTA TAGGCATCGG GACATCTTTG TTTGAAAAAT CTTGACAAAT CGGTAGGACC 238 ACATGGACCG TGATTACAAC AATATTGTTG TCCTCCGAAT GTTGTACAAG GGTTGTTACA 8299 ||||||||| ||| | |||| |||||||||| |||||||||| || ||||||| |||||||||| ACATGGACCT TGAGTGCAAC AATATTGTTG TCCTCCGAAT GTAGTACAAG GGTTGTTACA 298 TCCTCCAGGT ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTGGCTG TGCATTGAAT 8239 |||||| ||| |||||||||| |||||||||| |||||||||| ||||| || |||||||| TCCTCCGGGT ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTAGCAA CACATTGAAT 358 TGGATGACAT TTTCCAGGGC CAGGCTTAGT TGGGCCAAAA GACATAGGGA TGTTGAATCC 8179 |||||||||| ||||| || | |||| ||||| |||||| ||| |||||||||| |||||||||| TGGATGACAT TTTCCCGGCC CAGGGTTAGT TGGGCCGAAA GACATAGGGA TGTTGAATCC 418 ATCAATAACA GAAATATCCC AAAAATCTAG GTTACCAAAC TGGTTCAAAG CGTATTCAGC 8119 |||||||||| ||||| |||| | ||||||| ||| | ||| || ||||||| |||||||||| ATCAATAACA GAAATGTCCC AGAAATCTAA GTTGCTAAAT TGATTCAAAG CGTATTCAGC 478 TAAGGTGTTT GGTGGTTTAC CCCATCCTTT GCAATCCAGG ACTCCACCAC AATCACCAGT 8059 |||||||||| |||||||||| |||||||||| ||| |||| | |||||||||| ||||||| || TAAGGTGTTT GGTGGTTTAC CCCATCCTTT GCATTCCAAG ACTCCACCAC AATCACCGGT 538 CTGGCACCA 8050 ||||||||| CTGGCACCA 547 hqPGS_C08HBa0235H18.1-_SGN-E291342- (8596 8050) ******************************************************************************** EST sequence 425 -strand 523 n (File: SGN-E292854-) 1 GATTTCTACT TAATTAAGCC ACTTCAAGAG TATTTGTAGG AATCTCCAAT GGGAAATTTG 61 TTGTTTCATT GTGAGTAGAG CCATAAGGAC AAAACATAAC CTTGTAGTCT GTAGTCCAAC 121 TCTGACAAGT AAAAGTACTT GTTGGATCGT CTTGAGGATA ACTATAGGCA TCGGGACATC 181 TTTGTTTGAA AAATCTTGAC AAATCGGTAG GACCACATGG ACCTTGAGTG CAACAATATT 241 GTTGTCCTCC GAATGTAGTA CAAGGGTTGT TACATCCTCC GGGTACCCTA AGTGAACCAG 301 GGCATTCACC GTTTATATTA GCAACACATT GAATTGGATG ACATTTTCCC GGCCCAGGGT 361 TAGTTGGGCC GAAAGACATA GGGATGTTGA ATCCATCAAT AACAGAAATG TCCCAGAAAT 421 CTAAGTTGCT AAATTGATTC AAAGCGTATT CAGCTAAGGT GTTTGGTGGT TTACCCCATC 481 CTTTGCATTC CAAGACTCCA CCACAATCAC CGGTCTGGCA CCA Predicted gene structure (within gDNA segment 9551 to 7342): Exon 1 8567 8050 ( 518 n); cDNA 5 523 ( 519 n); score: 0.928 MATCH C08HBa0235H18.1- SGN-E292854- 0.928 518 0.990 C PGS_C08HBa0235H18.1-_SGN-E292854- (8567 8050) Alignment (genomic DNA sequence = upper lines): TCTACTT-AT TAAGCAACTT CAAGAGTACT TGTAGGCATC TCCAATGGGA AATTTGTTGT 8509 ||||||| || ||||| |||| |||||||| | |||||| ||| |||||||||| |||||||||| TCTACTTAAT TAAGCCACTT CAAGAGTATT TGTAGGAATC TCCAATGGGA AATTTGTTGT 64 TTCATTGTGA GTAGAGCCAT AAGGACAGAA CATTATCTTG TAGTCTGTAG TCCAACTCTG 8449 |||||||||| |||||||||| ||||||| || ||| | |||| |||||||||| |||||||||| TTCATTGTGA GTAGAGCCAT AAGGACAAAA CATAACCTTG TAGTCTGTAG TCCAACTCTG 124 ACAAGTAAAA GTACTAGTTG GATCGTCTTG AGGGTAACTA TAGGCATCAG GACATCTTTG 8389 |||||||||| ||||| |||| |||||||||| ||| |||||| |||||||| | |||||||||| ACAAGTAAAA GTACTTGTTG GATCGTCTTG AGGATAACTA TAGGCATCGG GACATCTTTG 184 TTTGAAAAAT CTTGACAATT CAGTAGGACC ACATGGACCG TGATTACAAC AATATTGTTG 8329 |||||||||| |||||||| | | |||||||| ||||||||| ||| | |||| |||||||||| TTTGAAAAAT CTTGACAAAT CGGTAGGACC ACATGGACCT TGAGTGCAAC AATATTGTTG 244 TCCTCCGAAT GTTGTACAAG GGTTGTTACA TCCTCCAGGT ACCCTAAGTG AACCAGGGCA 8269 |||||||||| || ||||||| |||||||||| |||||| ||| |||||||||| |||||||||| TCCTCCGAAT GTAGTACAAG GGTTGTTACA TCCTCCGGGT ACCCTAAGTG AACCAGGGCA 304 TTCACCGTTT ATATTGGCTG TGCATTGAAT TGGATGACAT TTTCCAGGGC CAGGCTTAGT 8209 |||||||||| ||||| || |||||||| |||||||||| ||||| || | |||| ||||| TTCACCGTTT ATATTAGCAA CACATTGAAT TGGATGACAT TTTCCCGGCC CAGGGTTAGT 364 TGGGCCAAAA GACATAGGGA TGTTGAATCC ATCAATAACA GAAATATCCC AAAAATCTAG 8149 |||||| ||| |||||||||| |||||||||| |||||||||| ||||| |||| | ||||||| TGGGCCGAAA GACATAGGGA TGTTGAATCC ATCAATAACA GAAATGTCCC AGAAATCTAA 424 GTTACCAAAC TGGTTCAAAG CGTATTCAGC TAAGGTGTTT GGTGGTTTAC CCCATCCTTT 8089 ||| | ||| || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGCTAAAT TGATTCAAAG CGTATTCAGC TAAGGTGTTT GGTGGTTTAC CCCATCCTTT 484 GCAATCCAGG ACTCCACCAC AATCACCAGT CTGGCACCA 8050 ||| |||| | |||||||||| ||||||| || ||||||||| GCATTCCAAG ACTCCACCAC AATCACCGGT CTGGCACCA 523 hqPGS_C08HBa0235H18.1-_SGN-E292854- (8567 8050) ******************************************************************************** EST sequence 356 -strand 494 n (File: SGN-E208399-) 1 AGTATTTGTA GGAATCTCCA ATGGGAAATT TGTTGTTTCA TTGTGAGTAG AGCCATAAGG 61 ACATAACATA ACCTTGTAGT CTGTAGTCCA ACTCTGACAA GTAAAAGTAC TTGTTGGATC 121 GTCTTGAGCA TAACTATAGG CATCGGGACA TCTTTGTTTG AAAAATCTTG ACAAATCGGT 181 AGGACCACAT GGACCTTGAG TGCAACAATA TTGTTGTCCT CCGAATGTAG TACAAGGGTT 241 GTTACATCCT CCGGGTACCC TAAGTGAACC AGGGCATTCG CCGTTTATAT TAGCAACACA 301 TTGAATTGGA TGACATTTTC CCGGCCCAGG GTTAGTTGGG CCGAAAGACA TAGGGATGTT 361 GAATCCATCA ATAACAGAAA TGTCCCAGAA ATCTAAGTTG CTAAATTGAT TCAAAGCGTA 421 TTCAGTTAAG GTGTTTGGTG GTTTACCCCA TCCTTTGCAT TCCAAGACTC CACCACAATC 481 ACCGGTCTGG CACC Predicted gene structure (within gDNA segment 9271 to 7352): Exon 1 8544 8051 ( 494 n); cDNA 1 494 ( 494 n); score: 0.925 MATCH C08HBa0235H18.1- SGN-E208399- 0.925 494 1.000 C PGS_C08HBa0235H18.1-_SGN-E208399- (8544 8051) Alignment (genomic DNA sequence = upper lines): AGTACTTGTA GGCATCTCCA ATGGGAAATT TGTTGTTTCA TTGTGAGTAG AGCCATAAGG 8485 |||| ||||| || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTATTTGTA GGAATCTCCA ATGGGAAATT TGTTGTTTCA TTGTGAGTAG AGCCATAAGG 60 ACAGAACATT ATCTTGTAGT CTGTAGTCCA ACTCTGACAA GTAAAAGTAC TAGTTGGATC 8425 ||| ||||| | |||||||| |||||||||| |||||||||| |||||||||| | |||||||| ACATAACATA ACCTTGTAGT CTGTAGTCCA ACTCTGACAA GTAAAAGTAC TTGTTGGATC 120 GTCTTGAGGG TAACTATAGG CATCAGGACA TCTTTGTTTG AAAAATCTTG ACAATTCAGT 8365 |||||||| |||||||||| |||| ||||| |||||||||| |||||||||| |||| || || GTCTTGAGCA TAACTATAGG CATCGGGACA TCTTTGTTTG AAAAATCTTG ACAAATCGGT 180 AGGACCACAT GGACCGTGAT TACAACAATA TTGTTGTCCT CCGAATGTTG TACAAGGGTT 8305 |||||||||| ||||| ||| | |||||||| |||||||||| |||||||| | |||||||||| AGGACCACAT GGACCTTGAG TGCAACAATA TTGTTGTCCT CCGAATGTAG TACAAGGGTT 240 GTTACATCCT CCAGGTACCC TAAGTGAACC AGGGCATTCA CCGTTTATAT TGGCTGTGCA 8245 |||||||||| || ||||||| |||||||||| ||||||||| |||||||||| | || || GTTACATCCT CCGGGTACCC TAAGTGAACC AGGGCATTCG CCGTTTATAT TAGCAACACA 300 TTGAATTGGA TGACATTTTC CAGGGCCAGG CTTAGTTGGG CCAAAAGACA TAGGGATGTT 8185 |||||||||| |||||||||| | || ||||| ||||||||| || ||||||| |||||||||| TTGAATTGGA TGACATTTTC CCGGCCCAGG GTTAGTTGGG CCGAAAGACA TAGGGATGTT 360 GAATCCATCA ATAACAGAAA TATCCCAAAA ATCTAGGTTA CCAAACTGGT TCAAAGCGTA 8125 |||||||||| |||||||||| | ||||| || ||||| ||| | ||| || | |||||||||| GAATCCATCA ATAACAGAAA TGTCCCAGAA ATCTAAGTTG CTAAATTGAT TCAAAGCGTA 420 TTCAGCTAAG GTGTTTGGTG GTTTACCCCA TCCTTTGCAA TCCAGGACTC CACCACAATC 8065 ||||| |||| |||||||||| |||||||||| ||||||||| |||| ||||| |||||||||| TTCAGTTAAG GTGTTTGGTG GTTTACCCCA TCCTTTGCAT TCCAAGACTC CACCACAATC 480 ACCAGTCTGG CACC 8051 ||| |||||| |||| ACCGGTCTGG CACC 494 hqPGS_C08HBa0235H18.1-_SGN-E208399- (8544 8051) ******************************************************************************** EST sequence 290 -strand 703 n (File: SGN-E274671-) 1 TTTTTTTTNT CAAATGCACT GTTGTTTTAT ACATCTAAGA CAAAAGTACA CATGAGATGT 61 AACTCTTATT CCGGTCTTTA AGTTTGTTAC GAACTCTTAT CAATAAAGTA AAAGTGAATA 121 TTTAAAAAAC TGAGCTATTA AGATTTTTCA TTACGGTAGA GATCAGTTGA CTAATTGAGG 181 CGATTTAAAA TGAAGAAACT CAAATTCACT TGGCCACTTC ATCAGTACTT GCAGGCATCT 241 CCAAGGGGAA ATTTGGATCA GCAACACCAT TAGGACAAAA GACAACCCTA TAGTTTGTAC 301 TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA TAAGCATCGG 361 GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT TGGGTGCAAC 421 AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACCTTAAGGG 481 CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC 541 TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC 601 AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC 661 CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTG Predicted gene structure (within gDNA segment 13112 to 5386): Exon 1 8555 8056 ( 500 n); cDNA 213 703 ( 491 n); score: 0.798 MATCH C08HBa0235H18.1- SGN-E274671- 0.798 500 0.711 C PGS_C08HBa0235H18.1-_SGN-E274671- (8555 8056) Alignment (genomic DNA sequence = upper lines): GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA 8496 || |||||| |||||||| |||||||||| || ||||||| ||| | || | | | | GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTG--G-ATC A--G-CA--A 264 GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA 8436 | |||| || |||| || | | | | ||| | |||| | | || | || |||||| || CA-CCATTAG GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA AGTAAATGTG 323 CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT GAAAAATCTT 8376 || || |||| ||||||| || ||| ||||| ||||| |||| |||||| || ||||||| | CTTGTAGGAT CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG 383 GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC TCCGAATGTT 8316 ||||| || | |||| ||||| |||||| || | ||||||| |||||||||| ||| || || GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG 443 GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC ACCGTTTATA 8256 |||||||||| |||||||||| |||||||||| |||| | | ||| ||||| ||| |||||| GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC ACCATTTATA 503 TTGGCTGTGC ATTGAATTGG ATGACATTTT CCAGGGCCAG GCTTAGTTGG GCCAAAAGAC 8196 ||||| |||| | ||||||| ||||||||| || | || | || ||||| | |||||| | TTGGCCGTGC AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC 563 ATAGGGATGT TGAATCCATC AATAACAGAA ATATCCCAAA AATCTAGGTT ACCAAACTGG 8136 || || || | | |||||||| | | |||| || ||||||| |||||| ||| | ||||||| ATTGGAATAT TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG 623 TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA ATCCAGGACT 8076 | ||| |||| | || |||| ||||||||| ||||| |||| |||| | || | | |||| TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT 683 CCACCACAAT CACCAGTCTG 8056 |||||||||| |||||||||| CCACCACAAT CACCAGTCTG 703 hqPGS_C08HBa0235H18.1-_SGN-E274671- (8555 8056) ******************************************************************************** EST sequence 301 -strand 652 n (File: SGN-E276802-) 1 ATGAGATGTA ACTCTTATTC CGGTCTTTAA GTTTGTTACG AACTCTTATC AATAAAGTAA 61 AAGTGAATAT TTAAAAAACT GAGCTATTAA GATTTTTCAT TACGGTAGAG ATCAGTTGAC 121 TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT GGCCACTTCA TCAGTACTTG 181 CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG ACAACCCTAT 241 AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT 301 AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 361 GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 421 CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 481 TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 541 AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 601 GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TG Predicted gene structure (within gDNA segment 12602 to 5386): Exon 1 8555 8056 ( 500 n); cDNA 162 652 ( 491 n); score: 0.798 MATCH C08HBa0235H18.1- SGN-E276802- 0.798 500 0.767 C PGS_C08HBa0235H18.1-_SGN-E276802- (8555 8056) Alignment (genomic DNA sequence = upper lines): GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA 8496 || |||||| |||||||| |||||||||| || ||||||| ||| | || | | | | GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTG--G-ATC A--G-CA--A 213 GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA 8436 | |||| || |||| || | | | | ||| | |||| | | || | || |||||| || CA-CCATTAG GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA AGTAAATGTG 272 CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT GAAAAATCTT 8376 || || |||| ||||||| || ||| ||||| ||||| |||| |||||| || ||||||| | CTTGTAGGAT CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG 332 GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC TCCGAATGTT 8316 ||||| || | |||| ||||| |||||| || | ||||||| |||||||||| ||| || || GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG 392 GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC ACCGTTTATA 8256 |||||||||| |||||||||| |||||||||| |||| | | ||| ||||| ||| |||||| GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC ACCATTTATA 452 TTGGCTGTGC ATTGAATTGG ATGACATTTT CCAGGGCCAG GCTTAGTTGG GCCAAAAGAC 8196 ||||| |||| | ||||||| ||||||||| || | || | || ||||| | |||||| | TTGGCCGTGC AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC 512 ATAGGGATGT TGAATCCATC AATAACAGAA ATATCCCAAA AATCTAGGTT ACCAAACTGG 8136 || || || | | |||||||| | | |||| || ||||||| |||||| ||| | ||||||| ATTGGAATAT TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG 572 TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA ATCCAGGACT 8076 | ||| |||| | || |||| ||||||||| ||||| |||| |||| | || | | |||| TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT 632 CCACCACAAT CACCAGTCTG 8056 |||||||||| |||||||||| CCACCACAAT CACCAGTCTG 652 hqPGS_C08HBa0235H18.1-_SGN-E276802- (8555 8056) ******************************************************************************** EST sequence 406 -strand 415 n (File: SGN-E275197-) 1 TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 61 TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 121 CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 181 GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 241 ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 301 AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT 361 TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA GTCTG Predicted gene structure (within gDNA segment 10232 to 5386): Exon 1 8468 8056 ( 413 n); cDNA 3 415 ( 413 n); score: 0.816 MATCH C08HBa0235H18.1- SGN-E275197- 0.816 413 0.995 C PGS_C08HBa0235H18.1-_SGN-E275197- (8468 8056) Alignment (genomic DNA sequence = upper lines): TAGTCTGTAG TCCAACTCTG ACAAGTAAAA GTACTAGTTG GATCGTCTTG AGGGTAACTA 8409 |||| |||| | | || | |||||||| || || || | |||||||||| ||||| ||| TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA 62 TAGGCATCAG GACATCTTTG TTTGAAAAAT CTTGACAATT CAGTAGGACC ACATGGACCG 8349 || ||||| | ||||||||| ||||||||| | ||||| | | ||||| || ||||||||| TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT 122 TGATTACAAC AATATTGTTG TCCTCCGAAT GTTGTACAAG GGTTGTTACA TCCTCCAGGT 8289 || | |||| |||||||||| |||||| || || ||||||| |||||||||| |||||||||| TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 182 ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTGGCTG TGCATTGAAT TGGATGACAT 8229 ||| |||| | | ||| || |||||| ||| |||||||| | |||| ||||| || |||||| ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 242 TTTCCAGGGC CAGGCTTAGT TGGGCCAAAA GACATAGGGA TGTTGAATCC ATCAATAACA 8169 ||||| | ||| || || |||| ||||| | ||| || | | || ||||| ||| | | | TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 302 GAAATATCCC AAAAATCTAG GTTACCAAAC TGGTTCAAAG CGTATTCAGC TAAGGTGTTT 8109 ||||| |||| ||||||||| ||| | |||| |||| ||| | |||| || || || ||||||| GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 362 GGTGGTTTAC CCCATCCTTT GCAATCCAGG ACTCCACCAC AATCACCAGT CTG 8056 || ||||| | ||||||| | || | | | |||||||||| |||||||||| ||| GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTG 415 hqPGS_C08HBa0235H18.1-_SGN-E275197- (8468 8056) ******************************************************************************** EST sequence 215 -strand 415 n (File: SGN-E206043-) 1 ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT 61 ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 121 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 181 TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 241 TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ACCAAGNAAN TATTAAATCC 301 ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 361 TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCA Predicted gene structure (within gDNA segment 10222 to 5376): Exon 1 8468 8064 ( 405 n); cDNA 2 415 ( 414 n); score: 0.759 MATCH C08HBa0235H18.1- SGN-E206043- 0.759 405 0.976 C PGS_C08HBa0235H18.1-_SGN-E206043- (8468 8064) Alignment (genomic DNA sequence = upper lines): TAGTCTGTAG TCCAACTCTG ACAAGTAAAA GTACTAGTTG GATCGTCTTG AGGGTAACTA 8409 |||| |||| | | || | |||||||| || || || | |||||||||| ||||| ||| TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA 61 TAGGCATCAG GACATCTTTG TTTGAAAAAT CTTGACAATT CAGTAGGACC ACATGGACCG 8349 || ||||| | ||||||||| ||||||||| | ||||| | | ||||| || ||||||||| TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT 121 TGATTACAAC AATATTGTTG TCCTCCGAAT GTTGTACAAG GGTTGTTACA TCCTCCAGGT 8289 || | |||| |||||||||| |||||| || || ||||||| |||||||||| |||||||||| TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 181 ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTGGCTG TGCATTGAAT TGGATGACAT 8229 ||| |||| | | ||| || |||||| ||| |||||||| | |||| ||||| || |||||| ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 241 TTTCCAGGGC CAGGCTTAGT TGGGCCAAAA GACATAGG-- ----G--A-T GTTGAATCCA 8178 ||||| | ||| || || |||| ||||| | ||| || | | | || |||||| TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA CCAAGNAANT ATTAAATCCA 301 TCAATAACAG AAATATCCCA AAAATCTAGG TTACCAAACT GGTTCAAAGC GTATTCAGCT 8118 || | | || |||| ||||| |||||||| | || | ||||| ||| ||| || ||| || ||| TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT 361 AAGGTGTTTG GTGGTTTACC CCATCCTTTG CAATCCAGGA CTCCACCACA ATCA 8064 | |||||||| | ||||| || |||||| | || | | || |||||||||| |||| AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCA 415 hqPGS_C08HBa0235H18.1-_SGN-E206043- (8468 8064) ******************************************************************************** EST sequence 363 -strand 533 n (File: SGN-E209133-) 1 GGTAGAGATC AGTTGACTAA TTGAGGCGAT TTAAAATGAA GAAACTCAAA TTCACTTGGC 61 CACTTCATCA GTACTTGCAG GCATCTCCAA GGGGAAATTT GGATCAGCAA CACCATTAGG 121 ACAAAAGACA ACCCTATAGT TTGTACTACC ACCAGGGCAA GTAAATGTGC TTGTAGGATC 181 GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG AAAAATTTGG ACAACTCTGT 241 AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT CCAAACGTGG TACAAGGGTT 301 GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA 361 ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG GCAAAAGTCA TGGAATATTA 421 AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGCGTAC 481 TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC ACC Predicted gene structure (within gDNA segment 11572 to 5546): Exon 1 8552 8071 ( 482 n); cDNA 62 533 ( 472 n); score: 0.793 MATCH C08HBa0235H18.1- SGN-E209133- 0.793 482 0.904 C PGS_C08HBa0235H18.1-_SGN-E209133- (8552 8071) Alignment (genomic DNA sequence = upper lines): ACTTCAAGAG TACTTGTAGG CATCTCCAAT GGGAAATTTG TTGTTTCATT GTGAGTAGAG 8493 |||||| || |||||| ||| ||||||||| |||||||||| | ||| | | | | ACTTCATCAG TACTTGCAGG CATCTCCAAG GGGAAATTTG --G-ATCA-- G-CA--ACA- 112 CCATAAGGAC AGAACATTAT CTTGTAGTCT GTAGTCCAAC TCTGACAAGT AAAAGTACTA 8433 |||| ||||| | || | | | | |||| | ||| | | || | ||||| ||| || || CCATTAGGAC AAAAGACAAC CCTATAGTTT GTACTACCAC CAGGGCAAGT AAATGTGCTT 172 GTTGGATCGT CTTGAGGGTA ACTATAGGCA TCAGGACATC TTTGTTTGAA AAATCTTGAC 8373 || ||||||| |||| ||||| ||||| ||| || ||||||| ||| ||||| |||| | ||| GTAGGATCGT CTTGTGGGTA GCTATAAGCA TCGGGACATC TTTTCTTGAA AAATTTGGAC 232 AATTCAGTAG GACCACATGG ACCGTGATTA CAACAATATT GTTGTCCTCC GAATGTTGTA 8313 || || |||| | |||||||| ||| || | |||||||||| |||||||||| || || ||| AACTCTGTAG GGCCACATGG ACCTTGGGTG CAACAATATT GTTGTCCTCC AAACGTGGTA 292 CAAGGGTTGT TACATCCTCC AGGTACCCTA AGTGAACCAG GGCATTCACC GTTTATATTG 8253 |||||||||| |||||||||| ||||||| || || | | || | |||||||| ||||||||| CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC ATTTATATTG 352 GCTGTGCATT GAATTGGATG ACATTTTCCA GGGCCAGGCT TAGTTGGGCC AAAAGACATA 8193 || ||||| | |||||| || ||||||||| | ||| | | |||||| | ||||| ||| GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC AAAAGTCAT- 411 GGGATGTTGA ATCCATCAAT AACAGAAATA TCCCAAAAAT CTAGGTTACC AAACTGGTTC 8133 || || || | ||||||| | | |||||| |||||||||| ||| ||| | |||||||| | GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT AAACTGGTCC 471 AAAGCGTATT CAGCTAAGGT GTTTGGTGGT TTACCCCATC CTTTGCAATC CAGGACTCCA 8073 || ||||| | | |||| ||| |||||| ||| || ||||||| | | || | | ||||||| AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG TAAGACTCCA 531 CC 8071 || CC 533 hqPGS_C08HBa0235H18.1-_SGN-E209133- (8552 8071) ******************************************************************************** EST sequence 273 -strand 652 n (File: SGN-E352998-) 1 TTTTTTTTTT TTAAGACAAA TTAAAGTACA ATATGTTATT GAAATCTTAG CCACCTCAAG 61 ATAACAAACT AAAAGAAATG TGGATAATAC AAAAGACAAG TAATGAACAA AACTCAACCA 121 TTTTGAACAA GAAAGAGGTG GCTACACTCA TGATGAATCT ACTTATTAAG CAACTTCAAG 181 AGTACTTGTA GGCATCTCCA ATGGGAAATT TGTTGTTTCA TTGTGAGTAG AGCCATAAGG 241 ACAGAACATT ATCTTGTAGT CTGTAGTCCA ACTCTGACAA GTAAAAGTAC TAGTTGGATC 301 GTCTTGAGGG TAACTATAGG CATCAGGACA TCTTTGTTTG AAAAATCTTG ACAATTCAGT 361 AGGACCACAT GGACCGTGAT TACAACAATA TTGTTGTCCT CCGAATGTTG TACAAGGGTT 421 GTTACATCCT CCAGGTACCC TAAGTGAACC AGGGCATTCA CCGTTTATAT TGGCTGTGCA 481 TTGAATTGGA TGACATTTTC CAGGGCCAGG CTTAGTTGGG CCAAAAGACA TAGGGATGTT 541 GAATCCATCA ATAACAGAAA TATCCCAAAA ATCTAGGTTA CCAAACTGGT TCAAAGCGTA 601 TTCAGCTAAG GTGTTTGGTG GTTTACCCCA TCCTTTGCAA TCCAGGACTC CA Predicted gene structure (within gDNA segment 9433 to 7473): Exon 1 8713 8073 ( 641 n); cDNA 12 652 ( 641 n); score: 1.000 PPA cDNA 11 1 MATCH C08HBa0235H18.1- SGN-E352998- 1.000 641 0.983 C PGS_C08HBa0235H18.1-_SGN-E352998- (8713 8073) Alignment (genomic DNA sequence = upper lines): TAAGACAAAT TAAAGTACAA TATGTTATTG AAATCTTAGC CACCTCAAGA TAACAAACTA 8654 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGACAAAT TAAAGTACAA TATGTTATTG AAATCTTAGC CACCTCAAGA TAACAAACTA 71 AAAGAAATGT GGATAATACA AAAGACAAGT AATGAACAAA ACTCAACCAT TTTGAACAAG 8594 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGAAATGT GGATAATACA AAAGACAAGT AATGAACAAA ACTCAACCAT TTTGAACAAG 131 AAAGAGGTGG CTACACTCAT GATGAATCTA CTTATTAAGC AACTTCAAGA GTACTTGTAG 8534 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGAGGTGG CTACACTCAT GATGAATCTA CTTATTAAGC AACTTCAAGA GTACTTGTAG 191 GCATCTCCAA TGGGAAATTT GTTGTTTCAT TGTGAGTAGA GCCATAAGGA CAGAACATTA 8474 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCATCTCCAA TGGGAAATTT GTTGTTTCAT TGTGAGTAGA GCCATAAGGA CAGAACATTA 251 TCTTGTAGTC TGTAGTCCAA CTCTGACAAG TAAAAGTACT AGTTGGATCG TCTTGAGGGT 8414 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTGTAGTC TGTAGTCCAA CTCTGACAAG TAAAAGTACT AGTTGGATCG TCTTGAGGGT 311 AACTATAGGC ATCAGGACAT CTTTGTTTGA AAAATCTTGA CAATTCAGTA GGACCACATG 8354 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACTATAGGC ATCAGGACAT CTTTGTTTGA AAAATCTTGA CAATTCAGTA GGACCACATG 371 GACCGTGATT ACAACAATAT TGTTGTCCTC CGAATGTTGT ACAAGGGTTG TTACATCCTC 8294 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCGTGATT ACAACAATAT TGTTGTCCTC CGAATGTTGT ACAAGGGTTG TTACATCCTC 431 CAGGTACCCT AAGTGAACCA GGGCATTCAC CGTTTATATT GGCTGTGCAT TGAATTGGAT 8234 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGGTACCCT AAGTGAACCA GGGCATTCAC CGTTTATATT GGCTGTGCAT TGAATTGGAT 491 GACATTTTCC AGGGCCAGGC TTAGTTGGGC CAAAAGACAT AGGGATGTTG AATCCATCAA 8174 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACATTTTCC AGGGCCAGGC TTAGTTGGGC CAAAAGACAT AGGGATGTTG AATCCATCAA 551 TAACAGAAAT ATCCCAAAAA TCTAGGTTAC CAAACTGGTT CAAAGCGTAT TCAGCTAAGG 8114 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAACAGAAAT ATCCCAAAAA TCTAGGTTAC CAAACTGGTT CAAAGCGTAT TCAGCTAAGG 611 TGTTTGGTGG TTTACCCCAT CCTTTGCAAT CCAGGACTCC A 8073 |||||||||| |||||||||| |||||||||| |||||||||| | TGTTTGGTGG TTTACCCCAT CCTTTGCAAT CCAGGACTCC A 652 hqPGS_C08HBa0235H18.1-_SGN-E352998- (8713 8073) ******************************************************************************** EST sequence 421 -strand 679 n (File: SGN-E357805-) 1 TTTTTTTTTC AAATGCACTG TGTTTTATAC ATCTAAGACA AAAGTACACA TGAGATGTAC 61 TCTTTATTCC GGTCTTTAAG TTTGTTACGA CTTCTTATCA ATAAAGTAAA AGTGAATATT 121 TAAAAAACTG AGCTATTAAG ATTTTTCATT ACGGTAGAGA TCAGTTGACT AATTGAGGCG 181 ATTTAAAATG AAGAAACTCA AATTCACTTG GCCACTTCAT CAGTACTTGC AGGCATCTCC 241 AAGGGGAAAT TTGGATCAGC AACACCATTA GGACAAAAGA CAACCCTATA GTTTGTACTA 301 CCACCAGGGC AAGTAAATGT GCTTGTAGGA TCGTCTTGTG GGTAGCTATA AGCATCGGGA 361 CATCTTTTCT TGAAAAATTT GGACAACTCT GTAGGGCCAC ATGGACCTTG GGTGCAACAA 421 TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 481 CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 541 GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 601 AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 661 CATCCGGTAC ACTGTAAGA Predicted gene structure (within gDNA segment 13092 to 5606): Exon 1 8555 8078 ( 478 n); cDNA 211 679 ( 469 n); score: 0.789 MATCH C08HBa0235H18.1- SGN-E357805- 0.789 478 0.704 C PGS_C08HBa0235H18.1-_SGN-E357805- (8555 8078) Alignment (genomic DNA sequence = upper lines): GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA 8496 || |||||| |||||||| |||||||||| || ||||||| ||| | || | | | | GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTG--G-ATC A--G-CA--A 262 GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA 8436 | |||| || |||| || | | | | ||| | |||| | | || | || |||||| || CA-CCATTAG GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA AGTAAATGTG 321 CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT GAAAAATCTT 8376 || || |||| ||||||| || ||| ||||| ||||| |||| |||||| || ||||||| | CTTGTAGGAT CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG 381 GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC TCCGAATGTT 8316 ||||| || | |||| ||||| |||||| || | ||||||| |||||||||| ||| || || GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG 441 GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC ACCGTTTATA 8256 |||||||||| |||||||||| |||||||||| |||| | | ||| ||||| ||| |||||| GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC ACCATTTATA 501 TTGGCTGTGC ATTGAATTGG ATGACATTTT CCAGGGCCAG GCTTAGTTGG GCCAAAAGAC 8196 ||||| |||| | ||||||| ||||||||| || | || | || ||||| | |||||| | TTGGCCGTGC AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC 561 ATAGGGATGT TGAATCCATC AATAACAGAA ATATCCCAAA AATCTAGGTT ACCAAACTGG 8136 || || || | | |||||||| | | |||| || ||||||| |||||| ||| | ||||||| ATTGGAATAT TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG 621 TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA ATCCAGGA 8078 | ||| |||| | || |||| ||||||||| ||||| |||| |||| | || | | || TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGA 679 hqPGS_C08HBa0235H18.1-_SGN-E357805- (8555 8078) ******************************************************************************** EST sequence 184 -strand 367 n (File: SGN-E301453-) 1 GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 61 AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 121 CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 181 CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 241 GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 301 CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 361 TGTAAGA Predicted gene structure (within gDNA segment 9972 to 5606): Exon 1 8444 8078 ( 367 n); cDNA 1 367 ( 367 n); score: 0.815 MATCH C08HBa0235H18.1- SGN-E301453- 0.815 367 1.000 C PGS_C08HBa0235H18.1-_SGN-E301453- (8444 8078) Alignment (genomic DNA sequence = upper lines): GTAAAAGTAC TAGTTGGATC GTCTTGAGGG TAACTATAGG CATCAGGACA TCTTTGTTTG 8385 ||||| || | | || ||||| |||||| ||| || ||||| | |||| ||||| ||||| ||| GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 60 AAAAATCTTG ACAATTCAGT AGGACCACAT GGACCGTGAT TACAACAATA TTGTTGTCCT 8325 |||||| | | |||| || || ||| |||||| ||||| || | |||||||| |||||||||| AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 120 CCGAATGTTG TACAAGGGTT GTTACATCCT CCAGGTACCC TAAGTGAACC AGGGCATTCA 8265 || || || | |||||||||| |||||||||| ||||||||| |||| | | ||| |||||| CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 180 CCGTTTATAT TGGCTGTGCA TTGAATTGGA TGACATTTTC CAGGGCCAGG CTTAGTTGGG 8205 || ||||||| |||| ||||| ||||||| |||||||||| | | ||| || |||||| CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 240 CCAAAAGACA TAGGGATGTT GAATCCATCA ATAACAGAAA TATCCCAAAA ATCTAGGTTA 8145 |||||| || | || || || |||||||| | | ||||| | |||||||| ||||| ||| GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 300 CCAAACTGGT TCAAAGCGTA TTCAGCTAAG GTGTTTGGTG GTTTACCCCA TCCTTTGCAA 8085 | |||||||| ||| ||||| || |||| | |||||||| | |||| ||||| ||| | || CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 360 TCCAGGA 8078 | | || TGTAAGA 367 hqPGS_C08HBa0235H18.1-_SGN-E301453- (8444 8078) ******************************************************************************** EST sequence 209 -strand 627 n (File: SGN-E206005-) 1 GCATCGATCA TAGATTGTTA TTCAGATCTT AGCCACTTCA AGCAAACAAA TGTAAAAGAA 61 ATGTGTACAA GGCAAATTAG ACACAATGTC CATCTTCAAA ACAAATTTAA CAAAACAGAG 121 ATTGGCTCAA CTCAAGATTT CTACTTAATT AAGCCACTTC AAGAGTATTT GTAGGAATCT 181 CCAATGGGAA ATTTGTTGTT TCATTGTGAG TAGAGCCATA AGGACAAAAC ATAACCTTGT 241 AGTCTGTAGT CCAACTCTGA CAAGTAAAAG TACTTGTTGG ATCGTCTTGA GGATAACTAT 301 AGGCATCGGG ACATCTTTGT TTGAAAAATC TTGACAAATC GGTAGGACCA CATGGACCTT 361 GAGTGCAACA ATATTGTTGT CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA 421 CCATAAGTGA ACCAGGGCAT TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT 481 TTCCCGGCCC AGGGTTAGTT GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG 541 AAATGTCCCA GAAATCTAAG TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG 601 GTGGTTTACC CCATCCTTTG CATTCCA Predicted gene structure (within gDNA segment 10901 to 7436): Exon 1 8691 8081 ( 611 n); cDNA 16 627 ( 612 n); score: 0.872 MATCH C08HBa0235H18.1- SGN-E206005- 0.872 611 0.974 C PGS_C08HBa0235H18.1-_SGN-E206005- (8691 8081) Alignment (genomic DNA sequence = upper lines): TGTTATTGAA ATCTTAGCCA CCTCAAGATA ACAAAC-TAA AAGAAATGTG GATAATACAA 8633 ||||||| | |||||||||| | ||||| | ||||| ||| |||||||||| | || ||| TGTTATTCAG ATCTTAGCCA CTTCAAGCAA ACAAATGTAA AAGAAATGTG TACAAGGCAA 75 AAGACAAGTA ATGAACAAAA CTCAACCATT TTGAACAAGA AAGAG-GTGG CTACACTCAT 8574 | | | | ||| || || || || ||||| | |||| ||| || ||||| ATTAGACACA ATGTCCATCT TCAAAACAAA TTTAACAAAA CAGAGATTGG CTCAACTCAA 135 GATGAATCTA CTT-ATTAAG CAACTTCAAG AGTACTTGTA GGCATCTCCA ATGGGAAATT 8515 ||| |||| ||| |||||| | |||||||| |||| ||||| || ||||||| |||||||||| GAT--TTCTA CTTAATTAAG CCACTTCAAG AGTATTTGTA GGAATCTCCA ATGGGAAATT 193 TGTTGTTTCA TTGTGAGTAG AGCCATAAGG ACAGAACATT ATCTTGTAGT CTGTAGTCCA 8455 |||||||||| |||||||||| |||||||||| ||| ||||| | |||||||| |||||||||| TGTTGTTTCA TTGTGAGTAG AGCCATAAGG ACAAAACATA ACCTTGTAGT CTGTAGTCCA 253 ACTCTGACAA GTAAAAGTAC TAGTTGGATC GTCTTGAGGG TAACTATAGG CATCAGGACA 8395 |||||||||| |||||||||| | |||||||| ||||||||| |||||||||| |||| ||||| ACTCTGACAA GTAAAAGTAC TTGTTGGATC GTCTTGAGGA TAACTATAGG CATCGGGACA 313 TCTTTGTTTG AAAAATCTTG ACAATTCAGT AGGACCACAT GGACCGTGAT TACAACAATA 8335 |||||||||| |||||||||| |||| || || |||||||||| ||||| ||| | |||||||| TCTTTGTTTG AAAAATCTTG ACAAATCGGT AGGACCACAT GGACCTTGAG TGCAACAATA 373 TTGTTGTCCT CCGAATGTTG TACAAGGGTT GTTACATCCT CCAGGTACCC TAAGTGAACC 8275 |||||||||| |||||||| | |||||||||| |||||||||| || |||||| |||||||||| TTGTTGTCCT CCGAATGTAG TACAAGGGTT GTTACATCCT CCGGGTACCA TAAGTGAACC 433 AGGGCATTCA CCGTTTATAT TGGCTGTGCA TTGAATTGGA TGACATTTTC CAGGGCCAGG 8215 |||||||||| |||||||||| | || || |||||||||| |||||||||| | || ||||| AGGGCATTCA CCGTTTATAT TAGCAACACA TTGAATTGGA TGACATTTTC CCGGCCCAGG 493 CTTAGTTGGG CCAAAAGACA TAGGGATGTT GAATCCATCA ATAACAGAAA TATCCCAAAA 8155 ||||||||| || ||||||| |||||||||| |||||||||| |||||||||| | ||||| || GTTAGTTGGG CCGAAAGACA TAGGGATGTT GAATCCATCA ATAACAGAAA TGTCCCAGAA 553 ATCTAGGTTA CCAAACTGGT TCAAAGCGTA TTCAGCTAAG GTGTTTGGTG GTTTACCCCA 8095 ||||| ||| | ||| || | |||||||||| |||||||||| |||||||||| |||||||||| ATCTAAGTTG CTAAATTGAT TCAAAGCGTA TTCAGCTAAG GTGTTTGGTG GTTTACCCCA 613 TCCTTTGCAA TCCA 8081 ||||||||| |||| TCCTTTGCAT TCCA 627 hqPGS_C08HBa0235H18.1-_SGN-E206005- (8691 8081) ******************************************************************************** EST sequence 6 -strand 591 n (File: SGN-E551414-) 1 TCAAACAAAC AAATGTAAAA GAAATGTGTA CAAGGCAAAT TAAAGACAAT GTCCATCTTC 61 AAAACAAATT TAACAAAAAA GAGATTGGCT CAACTCAAGA TTTCTACTTA ATTAAGCCAC 121 TTCAAGAGTA TTTGTAGGAA TCTCCAATGG GAAATTTGTT GTTTCATTGT GAGTAGAGCC 181 ATAAGGACAA AACATAACCT TGTAGTCTGT AGTCCAACTC TGACAAGTAA AAGTACTTGT 241 TGGATCGTCT TGAGGATAAC TATAGGCATC GGGACATCTT TGTTTGAAAA ATCTTGACAA 301 ATCGGTAGGA CCACATGGAC CTTGAGTGCA ACAATATTGT TGTCCTCCGA ATGTAGTACA 361 AGGGTTGTTA CATCCTCCGG GTACCCTAAG TGAACCAGGG CATTCACCGT TTATATTAGC 421 AACACATTGA ATTGGATGAC ATTTTCCCGG CCCAGGGTTA GTTGGGCCGA AAGACATAGG 481 GATGTTGAAT CCATCAATAA CAGAAATGTC CCAGAAATCT AAGTTGCTAA ATTGATTCAA 541 AGCGTATTCA GCTAAGGTGT TTGGTGGTTT ACCCCATCCT TTGCATTCCA A Predicted gene structure (within gDNA segment 10531 to 7426): Exon 1 8669 8081 ( 589 n); cDNA 1 590 ( 590 n); score: 0.874 MATCH C08HBa0235H18.1- SGN-E551414- 0.874 589 0.997 C PGS_C08HBa0235H18.1-_SGN-E551414- (8669 8081) Alignment (genomic DNA sequence = upper lines): TCAAGATAAC AAA-CTAAAA GAAATGTGGA TAATACAAAA GACAAGTAAT GAACAAAACT 8611 |||| ||| ||| ||||| |||||||| | || |||| | | ||| | || TCAAACAAAC AAATGTAAAA GAAATGTGTA CAAGGCAAAT TAAAGACAAT GTCCATCTTC 60 CAACCATTTT GAACAAGAAA GAG-GTGGCT ACACTCATGA TGAATCTACT T-ATTAAGCA 8553 || || || ||||| ||| ||| ||||| ||||| || | |||||| | ||||||| AAAACAAATT TAACAAAAAA GAGATTGGCT CAACTCAAGA T--TTCTACT TAATTAAGCC 118 ACTTCAAGAG TACTTGTAGG CATCTCCAAT GGGAAATTTG TTGTTTCATT GTGAGTAGAG 8493 |||||||||| || ||||||| ||||||||| |||||||||| |||||||||| |||||||||| ACTTCAAGAG TATTTGTAGG AATCTCCAAT GGGAAATTTG TTGTTTCATT GTGAGTAGAG 178 CCATAAGGAC AGAACATTAT CTTGTAGTCT GTAGTCCAAC TCTGACAAGT AAAAGTACTA 8433 |||||||||| | ||||| | |||||||||| |||||||||| |||||||||| ||||||||| CCATAAGGAC AAAACATAAC CTTGTAGTCT GTAGTCCAAC TCTGACAAGT AAAAGTACTT 238 GTTGGATCGT CTTGAGGGTA ACTATAGGCA TCAGGACATC TTTGTTTGAA AAATCTTGAC 8373 |||||||||| ||||||| || |||||||||| || ||||||| |||||||||| |||||||||| GTTGGATCGT CTTGAGGATA ACTATAGGCA TCGGGACATC TTTGTTTGAA AAATCTTGAC 298 AATTCAGTAG GACCACATGG ACCGTGATTA CAACAATATT GTTGTCCTCC GAATGTTGTA 8313 || || |||| |||||||||| ||| ||| | |||||||||| |||||||||| |||||| ||| AAATCGGTAG GACCACATGG ACCTTGAGTG CAACAATATT GTTGTCCTCC GAATGTAGTA 358 CAAGGGTTGT TACATCCTCC AGGTACCCTA AGTGAACCAG GGCATTCACC GTTTATATTG 8253 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| ||||||||| CAAGGGTTGT TACATCCTCC GGGTACCCTA AGTGAACCAG GGCATTCACC GTTTATATTA 418 GCTGTGCATT GAATTGGATG ACATTTTCCA GGGCCAGGCT TAGTTGGGCC AAAAGACATA 8193 || |||| |||||||||| ||||||||| || ||||| | |||||||||| ||||||||| GCAACACATT GAATTGGATG ACATTTTCCC GGCCCAGGGT TAGTTGGGCC GAAAGACATA 478 GGGATGTTGA ATCCATCAAT AACAGAAATA TCCCAAAAAT CTAGGTTACC AAACTGGTTC 8133 |||||||||| |||||||||| ||||||||| ||||| |||| ||| ||| | ||| || ||| GGGATGTTGA ATCCATCAAT AACAGAAATG TCCCAGAAAT CTAAGTTGCT AAATTGATTC 538 AAAGCGTATT CAGCTAAGGT GTTTGGTGGT TTACCCCATC CTTTGCAATC CA 8081 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || || AAAGCGTATT CAGCTAAGGT GTTTGGTGGT TTACCCCATC CTTTGCATTC CA 590 hqPGS_C08HBa0235H18.1-_SGN-E551414- (8669 8081) ******************************************************************************** EST sequence 275 -strand 558 n (File: SGN-E206119-) 1 AAAAGTGAAT ATTTAAAAAA CTGAGCTATT AAGATTTTTC ATTACGGTAG AGATCAGTTG 61 ACTAATTGAG GCGATTTAAA ATGAAGAAAC TCAAATTCAC TTGGCCACTT CATCAGTACT 121 TCAGGCATTC TCCAAGGGGA AATTTGGATC AGCAACACCA TTAGGACAAA AGACAACCCT 181 ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT 241 ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 301 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 361 TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 421 TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 481 AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 541 TGGGGGTTTG CCCCATCC Predicted gene structure (within gDNA segment 12022 to 5746): Exon 1 8555 8092 ( 464 n); cDNA 104 558 ( 455 n); score: 0.790 MATCH C08HBa0235H18.1- SGN-E206119- 0.790 464 0.832 C PGS_C08HBa0235H18.1-_SGN-E206119- (8555 8092) Alignment (genomic DNA sequence = upper lines): GCAACTTCAA GAGTACTTGT AGGCA-TCTC CAATGGGAAA TTTGTTGTTT CATTGTGAGT 8497 || |||||| ||||||| ||||| |||| ||| |||||| |||| | | || | | GCCACTTCAT CAGTACTT-C AGGCATTCTC CAAGGGGAAA TTTG--G-AT CA--G-CA-- 154 AGAGCCATAA GGACAGAACA TTATCTTGTA GTCTGTAGTC CAACTCTGAC AAGTAAAAGT 8437 | | |||| | ||||| || | | | | || || |||| | | || | | ||||||| || ACA-CCATTA GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT 213 ACTAGTTGGA TCGTCTTGAG GGTAACTATA GGCATCAGGA CATCTTTGTT TGAAAAATCT 8377 || || ||| |||||||| | |||| ||||| ||||| ||| ||||||| | |||||||| | GCTTGTAGGA TCGTCTTGTG GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT 273 TGACAATTCA GTAGGACCAC ATGGACCGTG ATTACAACAA TATTGTTGTC CTCCGAATGT 8317 ||||| || ||||| |||| ||||||| || | |||||| |||||||||| |||| || || GGACAACTCT GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT 333 TGTACAAGGG TTGTTACATC CTCCAGGTAC CCTAAGTGAA CCAGGGCATT CACCGTTTAT 8257 ||||||||| |||||||||| |||||||||| | |||| | | ||| |||| |||| ||||| GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT 393 ATTGGCTGTG CATTGAATTG GATGACATTT TCCAGGGCCA GGCTTAGTTG GGCCAAAAGA 8197 |||||| ||| || ||||||| |||||||| ||| | | || || |||| || |||||| ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT 453 CATAGGGATG TTGAATCCAT CAATAACAGA AATATCCCAA AAATCTAGGT TACCAAACTG 8137 ||| || || || ||||||| | | | ||| ||| |||||| ||||||| || | | |||||| CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG 513 GTTCAAAGCG TATTCAGCTA AGGTGTTTGG TGGTTTACCC CATCC 8092 || ||| ||| || || |||| ||||||||| ||||| ||| ||||| GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCC 558 hqPGS_C08HBa0235H18.1-_SGN-E206119- (8555 8092) ******************************************************************************** EST sequence 395 -strand 614 n (File: SGN-E357325-) 1 TTTTTTTTTG AGATGTAACT CTTATTCCGG TCTTTAAGTT TGTTACGCAC TCTTATCAAT 61 AAAGTAAAAG TGAATATTTA AAAAACTGAG CTATTAAGAT TTTTCATTAC GGTAGAGATC 121 AGTTGACTAA TTGAGGCGAT TTAAAATGAA GAAACTCAAA TTCACTTGGC CACTTCATCA 181 GTACTTGCAG GCATCTCCAA GGGGAAATTT GGATCAGCAA CACCATTAGG ACAAAAGACA 241 ACCCTATAGT TTGTCCTACC ACCAGGGCAA GTAAATGTGC TTGTAGGATC GTCTTGTGGG 301 TAGCTATAAG CATCGGGACA TCTTTTCTTG AAAAATATGG ACATCTCTGT AGGGCCACAT 361 GGTCCTTGGG TGCAACAATA TTGTTGTCCT CCAAACGTGG TACAAGGGTT GTTACATCCT 421 CCAGGTACCA TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA ATGAATTGCG 481 TGACATTTTC CTCCACTAGG TTTTGTTGGG GCAAAAGTCA TTGGAATATT AAATCCATCG 541 AGTAAAGAAA TGTCCCAAAA ATATAAGTTG CTAAAGTGGT CCAAGGCGTA CTCGGCTAGG 601 GTGTCTGGGG GTTT Predicted gene structure (within gDNA segment 12672 to 5836): Exon 1 8555 8101 ( 455 n); cDNA 169 614 ( 446 n); score: 0.782 MATCH C08HBa0235H18.1- SGN-E357325- 0.782 455 0.741 C PGS_C08HBa0235H18.1-_SGN-E357325- (8555 8101) Alignment (genomic DNA sequence = upper lines): GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA 8496 || |||||| |||||||| |||||||||| || ||||||| ||| | || | | | | GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTG--G-ATC A--G-CA--A 220 GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA 8436 | |||| || |||| || | | | | ||| | ||| | | || | || |||||| || CA-CCATTAG GACAAAAGAC AACCCTATAG TTTGTCCTAC CACCAGGGCA AGTAAATGTG 279 CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT GAAAAATCTT 8376 || || |||| ||||||| || ||| ||||| ||||| |||| |||||| || ||||||| | CTTGTAGGAT CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATATG 339 GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC TCCGAATGTT 8316 |||| || | |||| ||||| ||| || || | ||||||| |||||||||| ||| || || GACATCTCTG TAGGGCCACA TGGTCCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG 399 GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC ACCGTTTATA 8256 |||||||||| |||||||||| |||||||||| |||| | | ||| ||||| ||| |||||| GTACAAGGGT TGTTACATCC TCCAGGTACC ATAAGGGCGC GAGGACATTC ACCATTTATA 459 TTGGCTGTGC ATTGAATTGG ATGACATTTT CCAGGGCCAG GCTTAGTTGG GCCAAAAGAC 8196 ||||| |||| | ||||||| ||||||||| || | || | || ||||| | |||||| | TTGGCCGTGC AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC 519 ATAGGGATGT TGAATCCATC AATAACAGAA ATATCCCAAA AATCTAGGTT ACCAAACTGG 8136 || || || | | |||||||| | | |||| || ||||||| ||| || ||| | ||| ||| ATTGGAATAT TAAATCCATC GAGTAAAGAA ATGTCCCAAA AATATAAGTT GCTAAAGTGG 579 TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT GGTTT 8101 | ||| |||| | || |||| ||||| ||| ||||| TCCAAGGCGT ACTCGGCTAG GGTGTCTGGG GGTTT 614 hqPGS_C08HBa0235H18.1-_SGN-E357325- (8555 8101) ******************************************************************************** EST sequence 396 -strand 620 n (File: SGN-E357453-) 1 TTTTTTTTTT TTTGAGATGT AACTCTTATT CCGGTCTTTA AGTTTGTTAC GAACTCTTAT 61 CAATAAAGTA AAAGTGAATA TTTAAAAAAC TGAGCTATTA AGATTTTTCA TTACGGTAGA 121 GATCAGTTGA CTAATTGAGG CGATTTAAAA TGAAGAAACT CAAATTCACT TGGCCACTTC 181 ATCAGTACTT GCAGGCATCT CCAAGGGGAA ATTTGGATCA GCAACACCAT TAGGACAAAA 241 GACAACCCTA TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG 301 TGGGTAGCTA TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC 361 ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 421 TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 481 TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 541 ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 601 TAGGGTGTTT GGGGGTTTGC Predicted gene structure (within gDNA segment 13312 to 5816): Exon 1 8555 8101 ( 455 n); cDNA 173 618 ( 446 n); score: 0.796 PPA cDNA 13 1 MATCH C08HBa0235H18.1- SGN-E357453- 0.796 455 0.734 C PGS_C08HBa0235H18.1-_SGN-E357453- (8555 8101) Alignment (genomic DNA sequence = upper lines): GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA 8496 || |||||| |||||||| |||||||||| || ||||||| ||| | || | | | | GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTG--G-ATC A--G-CA--A 224 GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA 8436 | |||| || |||| || | | | | ||| | |||| | | || | || |||||| || CA-CCATTAG GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA AGTAAATGTG 283 CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT GAAAAATCTT 8376 || || |||| ||||||| || ||| ||||| ||||| |||| |||||| || ||||||| | CTTGTAGGAT CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG 343 GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC TCCGAATGTT 8316 ||||| || | |||| ||||| |||||| || | ||||||| |||||||||| ||| || || GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG 403 GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC ACCGTTTATA 8256 |||||||||| |||||||||| |||||||||| |||| | | ||| ||||| ||| |||||| GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC ACCATTTATA 463 TTGGCTGTGC ATTGAATTGG ATGACATTTT CCAGGGCCAG GCTTAGTTGG GCCAAAAGAC 8196 ||||| |||| | ||||||| ||||||||| || | || | || ||||| | |||||| | TTGGCCGTGC AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC 523 ATAGGGATGT TGAATCCATC AATAACAGAA ATATCCCAAA AATCTAGGTT ACCAAACTGG 8136 || || || | | |||||||| | | |||| || ||||||| |||||| ||| | ||||||| ATTGGAATAT TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG 583 TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT GGTTT 8101 | ||| |||| | || |||| ||||||||| ||||| TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG GGTTT 618 hqPGS_C08HBa0235H18.1-_SGN-E357453- (8555 8101) ******************************************************************************** EST sequence 224 -strand 615 n (File: SGN-E353799-) 1 TTTTTTTTTT TCACATGAGA TGTAACTCTT ATTCCGGTCT TTAAGTTTGT TACGAACTCT 61 TATCAATAAA GTAAAAGTGA ATATTTAAAA AACTGAGCTA TTAAGATTTT TCATTACGGT 121 AGAGATCAGT TGACTAATTG AGGCGATTTA AAATGAAGAA ACTCAAATTC ACTTGGCCAC 181 TTCATCAGTA CTTGCAGGCA TCTCCAAGGG GAAATTTGGA TCAGCAACAC CATTAGGACA 241 AAAGACAACC CTATAGTTTG TACTACCACC AGGGCAAGTA AATGTGCTTG TAGGATCGTC 301 TTGTGGGTAG CTATAAGCAT CGGGACATCT TTTCTTGAAA AATTTGGACA ACTCTGTAGG 361 GCCACATGGA CCTTGGGTGC AACAATATTG TTGTCCTCCA AACGTGGTAC AAGGGTTGTT 421 ACATCCTCCA GGTACCTTAA GGGCGCGAGG ACATTCACCA TTTATATTGG CCGTGCAATG 481 AATTGCGTGA CATTTTCCTC CACTAGGTTT TGTTGGGGCA AAAGTCATTG GAATATTAAA 541 TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA AACTGGTCCA AGGCGTACTC 601 GGCTAGGGTG TTTGG Predicted gene structure (within gDNA segment 12742 to 5896): Exon 1 8555 8107 ( 449 n); cDNA 176 615 ( 440 n); score: 0.795 PPA cDNA 11 1 MATCH C08HBa0235H18.1- SGN-E353799- 0.795 449 0.730 C PGS_C08HBa0235H18.1-_SGN-E353799- (8555 8107) Alignment (genomic DNA sequence = upper lines): GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA 8496 || |||||| |||||||| |||||||||| || ||||||| ||| | || | | | | GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTG--G-ATC A--G-CA--A 227 GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA 8436 | |||| || |||| || | | | | ||| | |||| | | || | || |||||| || CA-CCATTAG GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA AGTAAATGTG 286 CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT GAAAAATCTT 8376 || || |||| ||||||| || ||| ||||| ||||| |||| |||||| || ||||||| | CTTGTAGGAT CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG 346 GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC TCCGAATGTT 8316 ||||| || | |||| ||||| |||||| || | ||||||| |||||||||| ||| || || GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG 406 GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC ACCGTTTATA 8256 |||||||||| |||||||||| |||||||||| |||| | | ||| ||||| ||| |||||| GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC ACCATTTATA 466 TTGGCTGTGC ATTGAATTGG ATGACATTTT CCAGGGCCAG GCTTAGTTGG GCCAAAAGAC 8196 ||||| |||| | ||||||| ||||||||| || | || | || ||||| | |||||| | TTGGCCGTGC AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC 526 ATAGGGATGT TGAATCCATC AATAACAGAA ATATCCCAAA AATCTAGGTT ACCAAACTGG 8136 || || || | | |||||||| | | |||| || ||||||| |||||| ||| | ||||||| ATTGGAATAT TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG 586 TTCAAAGCGT ATTCAGCTAA GGTGTTTGG 8107 | ||| |||| | || |||| ||||||||| TCCAAGGCGT ACTCGGCTAG GGTGTTTGG 615 hqPGS_C08HBa0235H18.1-_SGN-E353799- (8555 8107) ******************************************************************************** EST sequence 562 +strand 606 n (File: SGN-E263405+) 1 TTTTTTTTTT TTTTTTTACA CATGAGATGT AACTCTTATT CCGGTCTTTA AGTTTGTTAC 61 GAACTCTTAT CAATAAAGTA AAAGTGAATA TTTAAAAAAC TGAGCTATTA AGATTTTTCA 121 TTACGGTAGA GATCAGTTGA CTAATTGAGG CGATTTAAAA TGAAGAAACT CAAATTCACT 181 TGGCCACTTC ATCAGTACTT GCAGGCATCT CCAAGGGGAA ATTTGGATCA GCAACACCAT 241 TAGGACAAAA GACAACCCTA TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG 301 GATCGTCTTG TGGGTAGCTA TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT 361 CTGTAGGGCC ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG 421 GGTTGTTACA TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG 481 TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 541 TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 601 CGTACT Predicted gene structure (within gDNA segment 12802 to 6046): Exon 1 8555 8125 ( 431 n); cDNA 183 604 ( 422 n); score: 0.794 PPA cDNA 17 1 MATCH C08HBa0235H18.1- SGN-E263405+ 0.794 431 0.711 C PGS_C08HBa0235H18.1-_SGN-E263405+ (8555 8125) Alignment (genomic DNA sequence = upper lines): GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA 8496 || |||||| |||||||| |||||||||| || ||||||| ||| | || | | | | GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTG--G-ATC A--G-CA--A 234 GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA 8436 | |||| || |||| || | | | | ||| | |||| | | || | || |||||| || CA-CCATTAG GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA AGTAAATGTG 293 CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT GAAAAATCTT 8376 || || |||| ||||||| || ||| ||||| ||||| |||| |||||| || ||||||| | CTTGTAGGAT CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG 353 GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC TCCGAATGTT 8316 ||||| || | |||| ||||| |||||| || | ||||||| |||||||||| ||| || || GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG 413 GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC ACCGTTTATA 8256 |||||||||| |||||||||| |||||||||| |||| | | ||| ||||| ||| |||||| GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC ACCATTTATA 473 TTGGCTGTGC ATTGAATTGG ATGACATTTT CCAGGGCCAG GCTTAGTTGG GCCAAAAGAC 8196 ||||| |||| | ||||||| ||||||||| || | || | || ||||| | |||||| | TTGGCCGTGC AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC 533 ATAGGGATGT TGAATCCATC AATAACAGAA ATATCCCAAA AATCTAGGTT ACCAAACTGG 8136 || || || | | |||||||| | | |||| || ||||||| |||||| ||| | ||||||| ATTGGAATAT TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG 593 TTCAAAGCGT A 8125 | ||| |||| | TCCAAGGCGT A 604 hqPGS_C08HBa0235H18.1-_SGN-E263405+ (8555 8125) ******************************************************************************** EST sequence 581 +strand 671 n (File: SGN-E213158+) 1 GAGAACTAGT CTCGAGTTTT TTTTTTTTTT TTTTTTTTTT TAATTCAAAT GCACTGTTGT 61 TTTATACATC TAAGACAAAA GTACACATGA GATGTAACTC TTATTCCGGT CTTTAAGTTT 121 GTTACGAACT CTTATCAATA AAGTAAAAGT GAATATTTAA AAAACTGAGC TATTAAGATT 181 TTTCATTACG GTAGAGATCA GTTGACTAAT TGAGGCGATT TAAAATGAAG AAACTCAAAT 241 TCACTTGGCC ACTTCATCAG TACTTGCAGG CATCTCCAAG GGGAAATTTG GATCAGCAAC 301 ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT 361 TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA 421 CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT 481 ACAAGGGTTG TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT 541 GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT 601 TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC 661 CAAGGCGTAC T Predicted gene structure (within gDNA segment 13452 to 6046): Exon 1 8555 8125 ( 431 n); cDNA 248 669 ( 422 n); score: 0.794 PPA cDNA 41 16 MATCH C08HBa0235H18.1- SGN-E213158+ 0.794 431 0.642 C PGS_C08HBa0235H18.1-_SGN-E213158+ (8555 8125) Alignment (genomic DNA sequence = upper lines): GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA 8496 || |||||| |||||||| |||||||||| || ||||||| ||| | || | | | | GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTG--G-ATC A--G-CA--A 299 GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA 8436 | |||| || |||| || | | | | ||| | |||| | | || | || |||||| || CA-CCATTAG GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA AGTAAATGTG 358 CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT GAAAAATCTT 8376 || || |||| ||||||| || ||| ||||| ||||| |||| |||||| || ||||||| | CTTGTAGGAT CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG 418 GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC TCCGAATGTT 8316 ||||| || | |||| ||||| |||||| || | ||||||| |||||||||| ||| || || GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG 478 GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC ACCGTTTATA 8256 |||||||||| |||||||||| |||||||||| |||| | | ||| ||||| ||| |||||| GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC ACCATTTATA 538 TTGGCTGTGC ATTGAATTGG ATGACATTTT CCAGGGCCAG GCTTAGTTGG GCCAAAAGAC 8196 ||||| |||| | ||||||| ||||||||| || | || | || ||||| | |||||| | TTGGCCGTGC AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC 598 ATAGGGATGT TGAATCCATC AATAACAGAA ATATCCCAAA AATCTAGGTT ACCAAACTGG 8136 || || || | | |||||||| | | |||| || ||||||| |||||| ||| | ||||||| ATTGGAATAT TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG 658 TTCAAAGCGT A 8125 | ||| |||| | TCCAAGGCGT A 669 hqPGS_C08HBa0235H18.1-_SGN-E213158+ (8555 8125) ******************************************************************************** EST sequence 362 -strand 283 n (File: SGN-E258498-) 1 ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 61 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 121 TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 181 TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 241 AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCG Predicted gene structure (within gDNA segment 9622 to 6096): Exon 1 8409 8127 ( 283 n); cDNA 1 283 ( 283 n); score: 0.823 MATCH C08HBa0235H18.1- SGN-E258498- 0.823 283 1.000 C PGS_C08HBa0235H18.1-_SGN-E258498- (8409 8127) Alignment (genomic DNA sequence = upper lines): ATAGGCATCA GGACATCTTT GTTTGAAAAA TCTTGACAAT TCAGTAGGAC CACATGGACC 8350 ||| ||||| |||||||||| |||||||| | | ||||| || ||||| | |||||||||| ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 60 GTGATTACAA CAATATTGTT GTCCTCCGAA TGTTGTACAA GGGTTGTTAC ATCCTCCAGG 8290 || | ||| |||||||||| ||||||| || || |||||| |||||||||| |||||||||| TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 120 TACCCTAAGT GAACCAGGGC ATTCACCGTT TATATTGGCT GTGCATTGAA TTGGATGACA 8230 |||| |||| | | ||| | ||||||| || ||||||||| ||||| |||| ||| ||||| TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 180 TTTTCCAGGG CCAGGCTTAG TTGGGCCAAA AGACATAGGG ATGTTGAATC CATCAATAAC 8170 |||||| | ||| || | ||||| |||| || ||| || || || |||| |||| | | TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 240 AGAAATATCC CAAAAATCTA GGTTACCAAA CTGGTTCAAA GCG 8127 |||||| ||| |||||||||| ||| | ||| ||||| ||| ||| AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCG 283 hqPGS_C08HBa0235H18.1-_SGN-E258498- (8409 8127) ******************************************************************************** EST sequence 193 -strand 526 n (File: SGN-E255494-) 1 AAGTAAAAGT GAATATTTAA AAAACTGAGC TATTAAGATT TTTCATTACG GTAGAGATCA 61 GTTGACTAAT TGAGGCGATT TAAAATGAAG AAACTCAAAT TCACTTGGCC ACTTCATCAG 121 TACTTGCAGG CATCTCCAAG GGGAAATTTG GATCAGCAAC ACCATTAGGA CAAAAGACAA 181 CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT TGTAGGATCG TCTTGTGGGT 241 AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA CAACTCTGTA GGGCCACATG 301 GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT ACAAGGGTTG TTACATCCTC 361 CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT GGCCGTGCAA TGAATTGCGT 421 GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT TGGAATATTA AATCCATCGA 481 CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGC Predicted gene structure (within gDNA segment 12062 to 6106): Exon 1 8555 8128 ( 428 n); cDNA 108 526 ( 419 n); score: 0.792 MATCH C08HBa0235H18.1- SGN-E255494- 0.792 428 0.814 C PGS_C08HBa0235H18.1-_SGN-E255494- (8555 8128) Alignment (genomic DNA sequence = upper lines): GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA 8496 || |||||| |||||||| |||||||||| || ||||||| ||| | || | | | | GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTG--G-ATC A--G-CA--A 159 GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA 8436 | |||| || |||| || | | | | ||| | |||| | | || | || |||||| || CA-CCATTAG GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA AGTAAATGTG 218 CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT GAAAAATCTT 8376 || || |||| ||||||| || ||| ||||| ||||| |||| |||||| || ||||||| | CTTGTAGGAT CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG 278 GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC TCCGAATGTT 8316 ||||| || | |||| ||||| |||||| || | ||||||| |||||||||| ||| || || GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG 338 GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC ACCGTTTATA 8256 |||||||||| |||||||||| |||||||||| |||| | | ||| ||||| ||| |||||| GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC ACCATTTATA 398 TTGGCTGTGC ATTGAATTGG ATGACATTTT CCAGGGCCAG GCTTAGTTGG GCCAAAAGAC 8196 ||||| |||| | ||||||| ||||||||| || | || | || ||||| | |||||| | TTGGCCGTGC AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC 458 ATAGGGATGT TGAATCCATC AATAACAGAA ATATCCCAAA AATCTAGGTT ACCAAACTGG 8136 || || || | | |||||||| | | |||| || ||||||| |||||| ||| | ||||||| ATTGGAATAT TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG 518 TTCAAAGC 8128 | ||| || TCCAAGGC 526 hqPGS_C08HBa0235H18.1-_SGN-E255494- (8555 8128) ******************************************************************************** EST sequence 268 -strand 593 n (File: SGN-E353171-) 1 TTTTTTTTTN AAGACAAATT AAAGTACAAT ATGTTATTGA AATCTTAGCC ACNTCAAGAT 61 AACAAACTAA AAGAAATGTG GATAATACAA AAGACAAGTA ATGAACAAAA CTCAACCATT 121 TTGAACAAGA AAGAGGTGGC TACACTCATG ATGAATCTAC TTATTAAGCA ACTTCAAGAG 181 TACTTGTAGG CATCTCCAAT GGGAAATTTG TTGTTTCATT GTGAGTAGAG CCATAAGGAC 241 AGAACATTAT CTTGTAGTCT GTAGTCCAAC TCTGACAAGT AAAAGTACTA GTTGGATCGT 301 CTTGAGGGTA ACTATAGGCA TCAGGACATC TTTGTTTGAA AAATCTTGAC AATTCAGTAG 361 GACCACATGG ACCGTGATTA CAACAATATT GTTGTCCTCC GAATGTTGTA CAAGGGTTGT 421 TACATCCTCC AGGTACCCTA AGTGAACCAG GGCATTCACC GTTTATATTG GCTGTGCATT 481 GAATTGGATG ACATTTTCCA GGGCCAGGCT TAGTTGGGCC AAAAGACATA GGGATGTTGA 541 ATCCATCAAT AACAGAAATA TCCCAAAAAT CTAGGTTACC AAACTGGTTC AAA Predicted gene structure (within gDNA segment 9422 to 7530): Exon 1 8712 8130 ( 583 n); cDNA 11 593 ( 583 n); score: 0.998 MATCH C08HBa0235H18.1- SGN-E353171- 0.998 583 0.983 C PGS_C08HBa0235H18.1-_SGN-E353171- (8712 8130) Alignment (genomic DNA sequence = upper lines): AAGACAAATT AAAGTACAAT ATGTTATTGA AATCTTAGCC ACCTCAAGAT AACAAACTAA 8653 |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| AAGACAAATT AAAGTACAAT ATGTTATTGA AATCTTAGCC ACNTCAAGAT AACAAACTAA 70 AAGAAATGTG GATAATACAA AAGACAAGTA ATGAACAAAA CTCAACCATT TTGAACAAGA 8593 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGAAATGTG GATAATACAA AAGACAAGTA ATGAACAAAA CTCAACCATT TTGAACAAGA 130 AAGAGGTGGC TACACTCATG ATGAATCTAC TTATTAAGCA ACTTCAAGAG TACTTGTAGG 8533 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGAGGTGGC TACACTCATG ATGAATCTAC TTATTAAGCA ACTTCAAGAG TACTTGTAGG 190 CATCTCCAAT GGGAAATTTG TTGTTTCATT GTGAGTAGAG CCATAAGGAC AGAACATTAT 8473 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCTCCAAT GGGAAATTTG TTGTTTCATT GTGAGTAGAG CCATAAGGAC AGAACATTAT 250 CTTGTAGTCT GTAGTCCAAC TCTGACAAGT AAAAGTACTA GTTGGATCGT CTTGAGGGTA 8413 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGTAGTCT GTAGTCCAAC TCTGACAAGT AAAAGTACTA GTTGGATCGT CTTGAGGGTA 310 ACTATAGGCA TCAGGACATC TTTGTTTGAA AAATCTTGAC AATTCAGTAG GACCACATGG 8353 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTATAGGCA TCAGGACATC TTTGTTTGAA AAATCTTGAC AATTCAGTAG GACCACATGG 370 ACCGTGATTA CAACAATATT GTTGTCCTCC GAATGTTGTA CAAGGGTTGT TACATCCTCC 8293 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCGTGATTA CAACAATATT GTTGTCCTCC GAATGTTGTA CAAGGGTTGT TACATCCTCC 430 AGGTACCCTA AGTGAACCAG GGCATTCACC GTTTATATTG GCTGTGCATT GAATTGGATG 8233 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGTACCCTA AGTGAACCAG GGCATTCACC GTTTATATTG GCTGTGCATT GAATTGGATG 490 ACATTTTCCA GGGCCAGGCT TAGTTGGGCC AAAAGACATA GGGATGTTGA ATCCATCAAT 8173 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATTTTCCA GGGCCAGGCT TAGTTGGGCC AAAAGACATA GGGATGTTGA ATCCATCAAT 550 AACAGAAATA TCCCAAAAAT CTAGGTTACC AAACTGGTTC AAA 8130 |||||||||| |||||||||| |||||||||| |||||||||| ||| AACAGAAATA TCCCAAAAAT CTAGGTTACC AAACTGGTTC AAA 593 hqPGS_C08HBa0235H18.1-_SGN-E353171- (8712 8130) ******************************************************************************** EST sequence 310 -strand 582 n (File: SGN-E308347-) 1 CAAAATTAAA AGTACAATAT GTTATTGAAT TCTTAACCCC CTCAAGATAC CAAACTAAAA 61 GGAAATGTGT ATTATACAAA AGACAAGTAA TGAACAAAAC TCAACCTTTT TGAACAAGAA 121 AGAGGTGGCT ACACTCATGA TGAATCTACT TATTAAGCAC CTTCAAGAGT ACTTGTAGGC 181 ATCTCCAATG GGAAATTTGT TGTTTCATTG TGAGTAGAGC CATAAGGACA GAACATTATC 241 TTGTAGTCTG TAGTCCAACT CTGACAAGTA AAAGTACTAG TTGGATCGTC TTGAGGGTAA 301 CTATAGGCAT CAGGACATCT TTGTTTGAAA AATCTTGACA ATTCAGTAGG ACCACATGGC 361 CCGTGATTAC AACAATATTG TTGTCCTCCG AATGTTGTAC AAGGGTTGTT ACATCCTCCA 421 GGTACCCTAA GTGAACCAGG GCATTCACCG TTTATATTGG CTGTGCATTG AATTGGATGA 481 CATTTTCCAG GGCCAGGCTT AGTTGGGCCA AAAGACATAG GGATGTTGAA TCCATCAATC 541 CCAGAAATAT CCCAAAAATC TAGGTTACCA AACTGGTTCA AA Predicted gene structure (within gDNA segment 9978 to 7530): Exon 1 8707 8130 ( 578 n); cDNA 4 582 ( 579 n); score: 0.973 MATCH C08HBa0235H18.1- SGN-E308347- 0.973 578 0.993 C PGS_C08HBa0235H18.1-_SGN-E308347- (8707 8130) Alignment (genomic DNA sequence = upper lines): AAATTAAAGT ACAATATGTT ATTGAAATCT TAGCCACCTC AAGATAACAA ACTAAAA-GA 8649 || | ||||| |||||||||| |||||| ||| || || |||| |||||| ||| ||||||| || AATTAAAAGT ACAATATGTT ATTGAATTCT TAACCCCCTC AAGATACCAA ACTAAAAGGA 63 AATGTGGATA ATACAAAAGA CAAGTAATGA ACAAAACTCA ACCATTTTGA ACAAGAAAGA 8589 |||||| || |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| AATGTGTATT ATACAAAAGA CAAGTAATGA ACAAAACTCA ACCTTTTTGA ACAAGAAAGA 123 GGTGGCTACA CTCATGATGA ATCTACTTAT TAAGCAACTT CAAGAGTACT TGTAGGCATC 8529 |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| GGTGGCTACA CTCATGATGA ATCTACTTAT TAAGCACCTT CAAGAGTACT TGTAGGCATC 183 TCCAATGGGA AATTTGTTGT TTCATTGTGA GTAGAGCCAT AAGGACAGAA CATTATCTTG 8469 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCAATGGGA AATTTGTTGT TTCATTGTGA GTAGAGCCAT AAGGACAGAA CATTATCTTG 243 TAGTCTGTAG TCCAACTCTG ACAAGTAAAA GTACTAGTTG GATCGTCTTG AGGGTAACTA 8409 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGTCTGTAG TCCAACTCTG ACAAGTAAAA GTACTAGTTG GATCGTCTTG AGGGTAACTA 303 TAGGCATCAG GACATCTTTG TTTGAAAAAT CTTGACAATT CAGTAGGACC ACATGGACCG 8349 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| TAGGCATCAG GACATCTTTG TTTGAAAAAT CTTGACAATT CAGTAGGACC ACATGGCCCG 363 TGATTACAAC AATATTGTTG TCCTCCGAAT GTTGTACAAG GGTTGTTACA TCCTCCAGGT 8289 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATTACAAC AATATTGTTG TCCTCCGAAT GTTGTACAAG GGTTGTTACA TCCTCCAGGT 423 ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTGGCTG TGCATTGAAT TGGATGACAT 8229 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTGGCTG TGCATTGAAT TGGATGACAT 483 TTTCCAGGGC CAGGCTTAGT TGGGCCAAAA GACATAGGGA TGTTGAATCC ATCAATAACA 8169 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| || TTTCCAGGGC CAGGCTTAGT TGGGCCAAAA GACATAGGGA TGTTGAATCC ATCAATCCCA 543 GAAATATCCC AAAAATCTAG GTTACCAAAC TGGTTCAAA 8130 |||||||||| |||||||||| |||||||||| ||||||||| GAAATATCCC AAAAATCTAG GTTACCAAAC TGGTTCAAA 582 hqPGS_C08HBa0235H18.1-_SGN-E308347- (8707 8130) ******************************************************************************** EST sequence 261 -strand 633 n (File: SGN-E274599-) 1 TTTTTTTTTT AATTCAAATG CACTGTTGTT TTATACATCT AAGACAAAAG TACACATGAG 61 ATGTAACTCT TATTCCGGTC TTTAAGTTTG TTACGAACTC TTATCAATAA AGTAAAAGTG 121 AATATTTAAA AAACTGAGCT ATTAAGATTT TTCATTACGG TAGAGATCAG TTGACTAATT 181 GAGGCGATTT AAAATGAAGA AACTCAAATT CACTTGGCCA CTTCATCAGT ACTTGCAGGC 241 ATCTCCAAGG GGAAATTTGG ATCAGCAACA CCATTAGGAC AAAAGACAAC CCTATAGTTT 301 GTACTACCAC CAGGGCAAGT AAATGTGCTT GTAGGATCGT CTTGTGGGTA GCTATAAGCA 361 TCGGGACATC TTTTCTTGAA AAATTTGGAC AACTCTGTAG GGCCACATGG ACCTTGGGTG 421 CAACAATATT GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA 481 AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 541 CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 601 TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAG Predicted gene structure (within gDNA segment 13152 to 6126): Exon 1 8555 8131 ( 425 n); cDNA 217 632 ( 416 n); score: 0.793 PPA cDNA 10 1 MATCH C08HBa0235H18.1- SGN-E274599- 0.793 425 0.671 C PGS_C08HBa0235H18.1-_SGN-E274599- (8555 8131) Alignment (genomic DNA sequence = upper lines): GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA 8496 || |||||| |||||||| |||||||||| || ||||||| ||| | || | | | | GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTG--G-ATC A--G-CA--A 268 GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA 8436 | |||| || |||| || | | | | ||| | |||| | | || | || |||||| || CA-CCATTAG GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA AGTAAATGTG 327 CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT GAAAAATCTT 8376 || || |||| ||||||| || ||| ||||| ||||| |||| |||||| || ||||||| | CTTGTAGGAT CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG 387 GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC TCCGAATGTT 8316 ||||| || | |||| ||||| |||||| || | ||||||| |||||||||| ||| || || GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG 447 GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC ACCGTTTATA 8256 |||||||||| |||||||||| |||||||||| |||| | | ||| ||||| ||| |||||| GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC ACCATTTATA 507 TTGGCTGTGC ATTGAATTGG ATGACATTTT CCAGGGCCAG GCTTAGTTGG GCCAAAAGAC 8196 ||||| |||| | ||||||| ||||||||| || | || | || ||||| | |||||| | TTGGCCGTGC AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC 567 ATAGGGATGT TGAATCCATC AATAACAGAA ATATCCCAAA AATCTAGGTT ACCAAACTGG 8136 || || || | | |||||||| | | |||| || ||||||| |||||| ||| | ||||||| ATTGGAATAT TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG 627 TTCAA 8131 | ||| TCCAA 632 hqPGS_C08HBa0235H18.1-_SGN-E274599- (8555 8131) ******************************************************************************** EST sequence 576 +strand 613 n (File: SGN-E213028+) 1 ACTAGTCTCG AGTTTTTTTT TTTTTTTTTT TTTTTTTTAC ACATGAGATG TAACTCTTAT 61 TCCGGTCTTT AAGTTTGTTA CGAACTCTTA TCAATAAAGT AAAAGTGAAT ATTTAAAAAA 121 CTGAGCTATT AAGATTTTTC ATTACGGTAG AGATCAGTTG ACTAATTGAG GCGATTTAAA 181 ATGAAGAAAC TCAAATTCAC TTGGCCACTT CATCAGTACT TGCAGGCATC TCCAAGGGGA 241 AATTTGGATC AGCAACACCA TTAGGACAAA AGACAACCCT ATAGTTTGTA CTACCACCAG 301 GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT ATAAGCATCG GGACATCTTT 361 TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT 421 GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC 481 ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG 541 TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA 601 AGTTGCTAAA CTG Predicted gene structure (within gDNA segment 13012 to 6186): Exon 1 8555 8137 ( 419 n); cDNA 204 613 ( 410 n); score: 0.792 PPA cDNA 38 12 MATCH C08HBa0235H18.1- SGN-E213028+ 0.792 419 0.684 C PGS_C08HBa0235H18.1-_SGN-E213028+ (8555 8137) Alignment (genomic DNA sequence = upper lines): GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA 8496 || |||||| |||||||| |||||||||| || ||||||| ||| | || | | | | GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTG--G-ATC A--G-CA--A 255 GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA 8436 | |||| || |||| || | | | | ||| | |||| | | || | || |||||| || CA-CCATTAG GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA AGTAAATGTG 314 CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT GAAAAATCTT 8376 || || |||| ||||||| || ||| ||||| ||||| |||| |||||| || ||||||| | CTTGTAGGAT CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG 374 GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC TCCGAATGTT 8316 ||||| || | |||| ||||| |||||| || | ||||||| |||||||||| ||| || || GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG 434 GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC ACCGTTTATA 8256 |||||||||| |||||||||| |||||||||| |||| | | ||| ||||| ||| |||||| GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC ACCATTTATA 494 TTGGCTGTGC ATTGAATTGG ATGACATTTT CCAGGGCCAG GCTTAGTTGG GCCAAAAGAC 8196 ||||| |||| | ||||||| ||||||||| || | || | || ||||| | |||||| | TTGGCCGTGC AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC 554 ATAGGGATGT TGAATCCATC AATAACAGAA ATATCCCAAA AATCTAGGTT ACCAAACTG 8137 || || || | | |||||||| | | |||| || ||||||| |||||| ||| | |||||| ATTGGAATAT TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTG 613 hqPGS_C08HBa0235H18.1-_SGN-E213028+ (8555 8137) ******************************************************************************** EST sequence 42 -strand 503 n (File: SGN-E350782-) 1 TTTTTTTTTT TTTTTTTTGA GCTATTAAGA TTTTTCATTA CGGTAGAGAT CAGTTGACTA 61 ATTGAGGCGA TTTAAAATGA AGAAACTCAA ATTCACTTGG CCACTTCATC AGTACTTGCA 121 GGCATCTCCA AGGGGAAATT TGGATCAGCA ACACCATTAG GACAAAAGAC AACCCTATAG 181 TTTGTACTAC CACCAGGGCA AGTAAATGTG CTTGTAGGAT CGTCTTGTGG GTAGCTATAA 241 GCATCGGGAC ATCTTTTCTT GAAAAATTTG GACAACTCTG TAGGGCCACA TGGACCTTGG 301 GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC 361 TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT 421 CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 481 ATGTCCCAAA AATCTAAGTT GCT Predicted gene structure (within gDNA segment 11982 to 6256): Exon 1 8555 8146 ( 410 n); cDNA 100 500 ( 401 n); score: 0.793 PPA cDNA 18 1 MATCH C08HBa0235H18.1- SGN-E350782- 0.793 410 0.815 C PGS_C08HBa0235H18.1-_SGN-E350782- (8555 8146) Alignment (genomic DNA sequence = upper lines): GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA 8496 || |||||| |||||||| |||||||||| || ||||||| ||| | || | | | | GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTG--G-ATC A--G-CA--A 151 GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA 8436 | |||| || |||| || | | | | ||| | |||| | | || | || |||||| || CA-CCATTAG GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA AGTAAATGTG 210 CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT GAAAAATCTT 8376 || || |||| ||||||| || ||| ||||| ||||| |||| |||||| || ||||||| | CTTGTAGGAT CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG 270 GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC TCCGAATGTT 8316 ||||| || | |||| ||||| |||||| || | ||||||| |||||||||| ||| || || GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG 330 GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC ACCGTTTATA 8256 |||||||||| |||||||||| |||||||||| |||| | | ||| ||||| ||| |||||| GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC ACCATTTATA 390 TTGGCTGTGC ATTGAATTGG ATGACATTTT CCAGGGCCAG GCTTAGTTGG GCCAAAAGAC 8196 ||||| |||| | ||||||| ||||||||| || | || | || ||||| | |||||| | TTGGCCGTGC AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC 450 ATAGGGATGT TGAATCCATC AATAACAGAA ATATCCCAAA AATCTAGGTT 8146 || || || | | |||||||| | | |||| || ||||||| |||||| ||| ATTGGAATAT TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT 500 hqPGS_C08HBa0235H18.1-_SGN-E350782- (8555 8146) ******************************************************************************** EST sequence 317 -strand 327 n (File: SGN-E207626-) 1 ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT 61 ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 121 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 181 TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 241 TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 301 AGAAATGTCC CAAAAATCTA AGTTGCT Predicted gene structure (within gDNA segment 10222 to 6256): Exon 1 8468 8146 ( 323 n); cDNA 2 324 ( 323 n); score: 0.814 MATCH C08HBa0235H18.1- SGN-E207626- 0.814 323 0.988 C PGS_C08HBa0235H18.1-_SGN-E207626- (8468 8146) Alignment (genomic DNA sequence = upper lines): TAGTCTGTAG TCCAACTCTG ACAAGTAAAA GTACTAGTTG GATCGTCTTG AGGGTAACTA 8409 |||| |||| | | || | |||||||| || || || | |||||||||| ||||| ||| TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA 61 TAGGCATCAG GACATCTTTG TTTGAAAAAT CTTGACAATT CAGTAGGACC ACATGGACCG 8349 || ||||| | ||||||||| ||||||||| | ||||| | | ||||| || ||||||||| TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT 121 TGATTACAAC AATATTGTTG TCCTCCGAAT GTTGTACAAG GGTTGTTACA TCCTCCAGGT 8289 || | |||| |||||||||| |||||| || || ||||||| |||||||||| |||||||||| TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 181 ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTGGCTG TGCATTGAAT TGGATGACAT 8229 ||| |||| | | ||| || |||||| ||| |||||||| | |||| ||||| || |||||| ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 241 TTTCCAGGGC CAGGCTTAGT TGGGCCAAAA GACATAGGGA TGTTGAATCC ATCAATAACA 8169 ||||| | ||| || || |||| ||||| | ||| || | | || ||||| ||| | | | TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 301 GAAATATCCC AAAAATCTAG GTT 8146 ||||| |||| ||||||||| ||| GAAATGTCCC AAAAATCTAA GTT 324 hqPGS_C08HBa0235H18.1-_SGN-E207626- (8468 8146) ******************************************************************************** EST sequence 214 -strand 264 n (File: SGN-E251433-) 1 TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT 61 TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 121 ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 181 TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 241 GAAATGTCCC AAAAATCTAA GTTG Predicted gene structure (within gDNA segment 9612 to 6276): Exon 1 8408 8146 ( 263 n); cDNA 1 263 ( 263 n); score: 0.825 MATCH C08HBa0235H18.1- SGN-E251433- 0.825 263 0.996 C PGS_C08HBa0235H18.1-_SGN-E251433- (8408 8146) Alignment (genomic DNA sequence = upper lines): TAGGCATCAG GACATCTTTG TTTGAAAAAT CTTGACAATT CAGTAGGACC ACATGGACCG 8349 || ||||| | ||||||||| ||||||||| | ||||| | | ||||| || ||||||||| TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT 60 TGATTACAAC AATATTGTTG TCCTCCGAAT GTTGTACAAG GGTTGTTACA TCCTCCAGGT 8289 || | |||| |||||||||| |||||| || || ||||||| |||||||||| |||||||||| TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 120 ACCCTAAGTG AACCAGGGCA TTCACCGTTT ATATTGGCTG TGCATTGAAT TGGATGACAT 8229 ||| |||| | | ||| || |||||| ||| |||||||| | |||| ||||| || |||||| ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 180 TTTCCAGGGC CAGGCTTAGT TGGGCCAAAA GACATAGGGA TGTTGAATCC ATCAATAACA 8169 ||||| | ||| || || |||| ||||| | ||| || | | || ||||| ||| | | | TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 240 GAAATATCCC AAAAATCTAG GTT 8146 ||||| |||| ||||||||| ||| GAAATGTCCC AAAAATCTAA GTT 263 hqPGS_C08HBa0235H18.1-_SGN-E251433- (8408 8146) ******************************************************************************** EST sequence 132 -strand 593 n (File: SGN-E302004-) 1 TTTTTTTTTT CGATCATAGA TTGTTATTCA GATCTTAGCC ACTTCAAACA AACAAATGTA 61 AAAGAAATGT GTACAAGGCA AATTAAAGAC AATGTCCATC TTCAAAACAA ATTTAACAAA 121 AAAGAGATTG GCTCAACTCA AGATTTCTAC TTAATTAAGC CACTTCAAGA GTATTTGTAG 181 GAATCTCCAA TGGGAAATTT GTTGTTTCAT TGTGAGTAGA GCCATAAGGA CAAAACATAA 241 CCTTGTAGTC TGTAGTCCAA CTCTGACAAG TAAAAGTACT TGTTGGATCG TCTTGAGGAT 301 AACTATAGGC ATCGGGACAT CTTTGTTTGA AAAATCTTGA CAAATCGGTA GGACCACATG 361 GACCTTGAGT GCAACAATAT TGTTGTCCTC CGAATGTAGT ACAAGGGTTG TTACATCCTC 421 CGGGTACCTT AAGTGAACCA GGGCATTCAC CGTTTATATT AGCAACACAT TGAATTGGAT 481 GACATTTTCC CGGCCCAGGG TTAGTTGGGC CGAAAGACAT AGGGATGTTG AATCCATCAA 541 TAACAGAAAT GTCCCAGAAA TCTAAGTTGC TCCTCGTGCC GATTCGGCAC GAG Predicted gene structure (within gDNA segment 10961 to 7134): Exon 1 8870 8854 ( 17 n); cDNA 1 17 ( 17 n); score: 0.706 Intron 1 8853 8696 ( 158 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.74) Exon 2 8695 8150 ( 546 n); cDNA 18 564 ( 547 n); score: 0.862 MATCH C08HBa0235H18.1- SGN-E302004- 0.862 563 0.949 C PGS_C08HBa0235H18.1-_SGN-E302004- (8870 8854,8695 8150) Alignment (genomic DNA sequence = upper lines): TTTATATTTT TGATCTGATT ACGGTAGAAT GTTATCAATA CTATTTTTCA TTCCTTTTTT 8811 ||| | |||| |||| TTTTTTTTTT CGATCAT... .......... .......... .......... .......... 17 TGTCTAAGGT TTAAGACTTA GATAATTAGG AATTAAAAAG ACAAAATTAA ACGATACTCC 8751 .......... .......... .......... .......... .......... .......... 17 AAATGCACTC TTGTGTGAGA ATTTTGAACA TCATGTGTAA GACAAATTAA AGTACAATAT 8691 | | .......... .......... .......... .......... .......... .....AGATT 22 GTTATTGAAA TCTTAGCCAC CTCAAGATAA CAAA-CTAAA AGAAATGTGG ATAATACAAA 8632 |||||| | | |||||||||| |||| || |||| |||| ||||||||| | || |||| GTTATTCAGA TCTTAGCCAC TTCAAACAAA CAAATGTAAA AGAAATGTGT ACAAGGCAAA 82 AGACAAGTAA TGAACAAAAC TCAACCATTT TGAACAAGAA AGAG-GTGGC TACACTCATG 8573 | | || || || || || | | ||||| || |||| |||| | ||||| | TTAAAGACAA TGTCCATCTT CAAAACAAAT TTAACAAAAA AGAGATTGGC TCAACTCAAG 142 ATGAATCTAC TTA-TTAAGC AACTTCAAGA GTACTTGTAG GCATCTCCAA TGGGAAATTT 8514 || ||||| ||| |||||| ||||||||| ||| |||||| | |||||||| |||||||||| AT--TTCTAC TTAATTAAGC CACTTCAAGA GTATTTGTAG GAATCTCCAA TGGGAAATTT 200 GTTGTTTCAT TGTGAGTAGA GCCATAAGGA CAGAACATTA TCTTGTAGTC TGTAGTCCAA 8454 |||||||||| |||||||||| |||||||||| || ||||| | ||||||||| |||||||||| GTTGTTTCAT TGTGAGTAGA GCCATAAGGA CAAAACATAA CCTTGTAGTC TGTAGTCCAA 260 CTCTGACAAG TAAAAGTACT AGTTGGATCG TCTTGAGGGT AACTATAGGC ATCAGGACAT 8394 |||||||||| |||||||||| ||||||||| |||||||| | |||||||||| ||| |||||| CTCTGACAAG TAAAAGTACT TGTTGGATCG TCTTGAGGAT AACTATAGGC ATCGGGACAT 320 CTTTGTTTGA AAAATCTTGA CAATTCAGTA GGACCACATG GACCGTGATT ACAACAATAT 8334 |||||||||| |||||||||| ||| || ||| |||||||||| |||| ||| | ||||||||| CTTTGTTTGA AAAATCTTGA CAAATCGGTA GGACCACATG GACCTTGAGT GCAACAATAT 380 TGTTGTCCTC CGAATGTTGT ACAAGGGTTG TTACATCCTC CAGGTACCCT AAGTGAACCA 8274 |||||||||| ||||||| || |||||||||| |||||||||| | |||||| | |||||||||| TGTTGTCCTC CGAATGTAGT ACAAGGGTTG TTACATCCTC CGGGTACCTT AAGTGAACCA 440 GGGCATTCAC CGTTTATATT GGCTGTGCAT TGAATTGGAT GACATTTTCC AGGGCCAGGC 8214 |||||||||| |||||||||| || ||| |||||||||| |||||||||| || ||||| GGGCATTCAC CGTTTATATT AGCAACACAT TGAATTGGAT GACATTTTCC CGGCCCAGGG 500 TTAGTTGGGC CAAAAGACAT AGGGATGTTG AATCCATCAA TAACAGAAAT ATCCCAAAAA 8154 |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| ||||| ||| TTAGTTGGGC CGAAAGACAT AGGGATGTTG AATCCATCAA TAACAGAAAT GTCCCAGAAA 560 TCTA 8150 |||| TCTA 564 hqPGS_C08HBa0235H18.1-_SGN-E302004- (8695 8150) ******************************************************************************** EST sequence 807 +strand 654 n (File: SGN-E375346+) 1 TTTTTTTTTT TTTTTTTTTT TTTTTTTTTT TTTTTTTTTA AAAAAAAAAA AAACGAAAAT 61 TCAAATGCAC TGTTGTTTTA TACATTTAAA ACAAAAGTCC ACATGAAATG TAACTTTTAT 121 TCCGGTCTTT AAGTTTGTTA CAAACTTTTA TCAATAAAGT AAAAGGGAAT ATTTAAAAAA 181 CTGAGCTATT AAAATTTTTC ATTACGGTAA AAATCAGTTG ACTAATTGAG GGGATTTAAA 241 ATGAAAAAAC TCAAATTCAC TTGGCCACTT CATCAGTACT TGCAGGCATT TCCAAGGGGA 301 AATTTGGATC AGCAACCCCT TTAGGACAAA AGACACCCCT ATAGTTTGTA CTACCACCAG 361 GGCAAGTAAA TGTGCTTGTA GGATCGTTTT GGGGGTAGCT ATAAGCATCG GGACATTTTT 421 TTTTGAAAAA TTTGGACAAC TTTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT 481 GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC 541 ATTCACCATT TATATTGGCC GGGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG 601 TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAA Predicted gene structure (within gDNA segment 13612 to 6376): Exon 1 10870 10751 ( 120 n); cDNA 141 256 ( 116 n); score: 0.608 Intron 1 10750 8563 (2188 n); Pd: 0.000 (s: 0.66), Pa: 0.000 (s: 0.80) Exon 2 8562 8156 ( 407 n); cDNA 257 654 ( 398 n); score: 0.767 PPA cDNA 39 1 MATCH C08HBa0235H18.1- SGN-E375346+ 0.731 527 0.806 C PGS_C08HBa0235H18.1-_SGN-E375346+ (10870 10751,8562 8156) Alignment (genomic DNA sequence = upper lines): CAAAATTTAT ATTTTTATTA AAAAAAATTA TATTTATAAA CGTAGAAAAT TCACTATTTT 10811 |||| ||| | || || |||| | |||||| ||| | || | | | ||| CAAACTTT-T ATCAATAAAG TAAAAGGGAA TATTTAAAAA ACT-GAGCTA TTA-AAATTT 197 TTTTTTATCA TTAACATGTT TTACATATTT TAGAGGATTA AGAGTGAAAA AGATTCTAAT 10751 || ||| | || || || || || || ||||| | | |||||| | | || ||| TTCATTACGG TAAAAATCAG TTGACTAATT GAGGGGATTT AAAATGAAAA A-ACTCAAAT 256 AACTTGTTAA CTTGATATAA TAGATTAACA AGTTGATTAT ATCGCACTCT AAAGAATAAA 10691 .......... .......... .......... .......... .......... .......... 256 ATGAATTGTC AAAAATAATA TTAATAATTT ATCGCCACTC AAAAAAATAA AAAATATTGT 10631 .......... .......... .......... .......... .......... .......... 256 AGAACGTGAC TTTATCAATA CTAATCTCTT TTAAAACAAC GATTGATTTG AACTTCACCG 10571 .......... .......... .......... .......... .......... .......... 256 AAATTGATGG AATGAAATGA CTAAATATTG TATTGGGATA AAATAATGGG ATAATTGTAT 10511 .......... .......... .......... .......... .......... .......... 256 ATAATAGCAA ACTAATAACC TAAAATAAAT GGAGTAGCTA TGATTTGATT TAATTGTGCA 10451 .......... .......... .......... .......... .......... .......... 256 CCATAGCAAA CGTTAGCCAA AGTTTGTCAG TCGCCTCTCT CTCTTTATAC ACAAAAGTGT 10391 .......... .......... .......... .......... .......... .......... 256 ATAAATTGTG TTTCTGTTTT GTATAAGCGA GAGAAAACTG TATATACACA TGCAAAAACA 10331 .......... .......... .......... .......... .......... .......... 256 TATATCTTCG TGTTATACAC TTAATTATAC AATTTACAAA TATTTTACTT CAATTCAATT 10271 .......... .......... .......... .......... .......... .......... 256 GTAGACAAAT GCAAATTTTA TACAAATATT GCAGCGAAAA AGGCGAACGA ATTATACAAT 10211 .......... .......... .......... .......... .......... .......... 256 TGCAGTGAAA TACAATTTTC TCTTGCTTTA TACAACAGAA GTGTATAAAT TGTGTTTATG 10151 .......... .......... .......... .......... .......... .......... 256 TTTTTGTATA AAGCGAGAGA AAAACATATA TTTTTTTCCT ATACACTTAT AATTATGCAA 10091 .......... .......... .......... .......... .......... .......... 256 TATACATACA TTTTACTTCG ATTCAATTGT ATGCAAAATA AATTTTATAC AAATATTGCA 10031 .......... .......... .......... .......... .......... .......... 256 GAGAATTATA CAATATGCAT TATACAATTG CAGTGAAATA TGATAGCGAA TTATACAATT 9971 .......... .......... .......... .......... .......... .......... 256 GCGGCGAAAT AGGCCAGCAA ATTATACAAT TGTATATTAT AGTGAATTAT ACAGTTTTAT 9911 .......... .......... .......... .......... .......... .......... 256 GTTTGCTATG GAGCGTAATT ATACAAATTT TGCTATAACA CACAAATATA AATTTTTTAT 9851 .......... .......... .......... .......... .......... .......... 256 TTGCTATATG CGAAAGTTGT CCTAAAACAA TTAACAACAT TACTCTTGAA AATAATATTC 9791 .......... .......... .......... .......... .......... .......... 256 TTTTGTCAAT ATAGTAAGTA ATGATGAATA ATTATTTAAC CACCAAAGTA ACATAAAAAA 9731 .......... .......... .......... .......... .......... .......... 256 CCCCACTCAC CAATATCTCC ATATACCCCC ATTTTCTTGA CTTTTTTGAG TGTAGATACA 9671 .......... .......... .......... .......... .......... .......... 256 CATACGTTTT TCTTTTAATT ATATATCCAC TTGACACATG ACATATTTTT TTATAATAAT 9611 .......... .......... .......... .......... .......... .......... 256 GGCGTGGAGT TAAAAAGTTT ACGTAATGTG AATTTAAATT ATTAAGTTAA GTTTTAAGAA 9551 .......... .......... .......... .......... .......... .......... 256 AAAAAAGAGT GAAATTATTT GAACATATTT TGTTAATGAT CAGTTATTTC AAATAAAACA 9491 .......... .......... .......... .......... .......... .......... 256 TGATAAATAT TTTAAAATGA ATTGAATATT ATGGTGCTAA GGACTTTGCT TCTTATTATC 9431 .......... .......... .......... .......... .......... .......... 256 AGGAGTGATT GCATAAAAGT CACGGAATAT GCACCATAAC GTGCTGAAAA TATGCAAAGG 9371 .......... .......... .......... .......... .......... .......... 256 GGCTGTGGTG GGATGTTAGT TTTCAATTTT TAATTTGATA TATCGAGTTT GAGCCATGAG 9311 .......... .......... .......... .......... .......... .......... 256 AGTAAATTTC TTTTCATTAT ATATAATAAG TGTTTTGCCT TCAAAGTGAA ATTTTTCGAA 9251 .......... .......... .......... .......... .......... .......... 256 TGCAAATTTA AATTTATCAA GCTCAATACA AATGTTGAAT ATCAAGAGCA TGATTAATAG 9191 .......... .......... .......... .......... .......... .......... 256 CGGAGTAATA ATTTTCATTA GAGGATTTTG AAATATGAGA AAATAAACAC ACTAACAATT 9131 .......... .......... .......... .......... .......... .......... 256 TAAAGAAAAA AAAAATTCAT TCATTAATTA ATCACTGTAT ATACATTAAA AATAATTTTA 9071 .......... .......... .......... .......... .......... .......... 256 ACTATATATA AATAAAATTA ATAATTATCT ATTTAAAAAA TTGAATAAAC CCCTTAATTC 9011 .......... .......... .......... .......... .......... .......... 256 TACGTGGCTC CACCTTAACC TTTGCATGAA ATATTCTAAA AGCCGCCTAC AAAAAAGATT 8951 .......... .......... .......... .......... .......... .......... 256 TCCACCTCGA CTAATTATTA TGTCCTATAA AGATAGCTAT CCTATATAGT AATTATAATA 8891 .......... .......... .......... .......... .......... .......... 256 GTTTATCTTG TCCCTACAAT TTTATATTTT TGATCTGATT ACGGTAGAAT GTTATCAATA 8831 .......... .......... .......... .......... .......... .......... 256 CTATTTTTCA TTCCTTTTTT TGTCTAAGGT TTAAGACTTA GATAATTAGG AATTAAAAAG 8771 .......... .......... .......... .......... .......... .......... 256 ACAAAATTAA ACGATACTCC AAATGCACTC TTGTGTGAGA ATTTTGAACA TCATGTGTAA 8711 .......... .......... .......... .......... .......... .......... 256 GACAAATTAA AGTACAATAT GTTATTGAAA TCTTAGCCAC CTCAAGATAA CAAACTAAAA 8651 .......... .......... .......... .......... .......... .......... 256 GAAATGTGGA TAATACAAAA GACAAGTAAT GAACAAAACT CAACCATTTT GAACAAGAAA 8591 .......... .......... .......... .......... .......... .......... 256 GAGGTGGCTA CACTCATGAT GAATCTACTT ATTAAGCAAC TTCAAGAGTA CTTGTAGGCA 8531 | | | || || |||| |||| |||| ||||| .......... .......... ........TC ACTTGGCCAC TTCATCAGTA CTTGCAGGCA 288 TCTCCAATGG GAAATTTGTT GTTTCATTGT GAGTAGAGCC ATAAGGACAG AACATTATCT 8471 | ||||| || |||||||| | ||| | | | || | |||||| || | | TTTCCAAGGG GAAATTTG-- G-ATCA--G- CA--ACC-CC TTTAGGACAA AAGACACCCC 339 TGTAGTCTGT AGTCCAACTC TGACAAGTAA AAGTACTAGT TGGATCGTCT TGAGGGTAAC 8411 | |||| ||| | | | || | ||||||| | || || || ||||||| | || ||||| | TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTTT TGGGGGTAGC 399 TATAGGCATC AGGACATCTT TGTTTGAAAA ATCTTGACAA TTCAGTAGGA CCACATGGAC 8351 |||| ||||| |||||| || | |||||||| || | ||||| | ||||| |||||||||| TATAAGCATC GGGACATTTT TTTTTGAAAA ATTTGGACAA CTTTGTAGGG CCACATGGAC 459 CGTGATTACA ACAATATTGT TGTCCTCCGA ATGTTGTACA AGGGTTGTTA CATCCTCCAG 8291 | || | || |||||||||| |||||||| | | || ||||| |||||||||| |||||||||| CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 519 GTACCCTAAG TGAACCAGGG CATTCACCGT TTATATTGGC TGTGCATTGA ATTGGATGAC 8231 ||||| |||| | | ||| |||||||| | |||||||||| | ||| ||| |||| |||| GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGGGCAATGA ATTGCGTGAC 579 ATTTTCCAGG GCCAGGCTTA GTTGGGCCAA AAGACATAGG GATGTTGAAT CCATCAATAA 8171 ||||||| | ||| || |||||| ||| ||| ||| || || || ||| ||||| | | ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 639 CAGAAATATC CCAAA 8156 |||||| || ||||| AAGAAATGTC CCAAA 654 hqPGS_C08HBa0235H18.1-_SGN-E375346+ (8562 8156) ******************************************************************************** EST sequence 287 -strand 605 n (File: SGN-E353161-) 1 TTTTTTTTTT TAAACGATAC TCCAAATGCA CTCTTGTGTG AGAATTTTGA ACATCATGTG 61 TAAGACAAAT TAAAGTACAA TATGTTATTG AAATCTTAGC CACCTCAAGA TAACAAACTA 121 AAAGAAATGT GGATAATACA AAAGACAAGT AATGAACAAA ACTCAACCAT TTTGAACAAG 181 AAAGAGGTGG CTACACTCAT GATGAATCTA CTTATTAAGC AACTTCAAGA GTACTTGTAG 241 GCATCTCCAA TGGGAAATTT GTTGTTTCAT TGTGAGTAGA GCCATAAGGA CAGAACATTA 301 TCTTGTAGTC TGTAGTCCAA CTCTGACAAG TAAAAGTACT AGTTGGATCG TCTTGAGGGT 361 AACTATAGGC ATCAGGACAT CTTTGTTTGA AAAATCTTGA CAATTCAGTA GGACCACATG 421 GACCGTGATT ACAACAATAT TGTTGTCCTC CGAATGTTGT ACAAGGGTTG TTACATCCTC 481 CAGGTACCCT AAGTGAACCA GGGCATTCAC CGTTTATATT GGCTGTGCAT TGAATTGGAT 541 GACATTTTCC AGGGCCAGGC TTAGTTGGGC CAAAAGACAT AGGGATGTTG AATCCATCAA 601 TAACA Predicted gene structure (within gDNA segment 9464 to 7569): Exon 1 8764 8169 ( 596 n); cDNA 10 605 ( 596 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E353161- 1.000 596 0.985 C PGS_C08HBa0235H18.1-_SGN-E353161- (8764 8169) Alignment (genomic DNA sequence = upper lines): TTAAACGATA CTCCAAATGC ACTCTTGTGT GAGAATTTTG AACATCATGT GTAAGACAAA 8705 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAAACGATA CTCCAAATGC ACTCTTGTGT GAGAATTTTG AACATCATGT GTAAGACAAA 69 TTAAAGTACA ATATGTTATT GAAATCTTAG CCACCTCAAG ATAACAAACT AAAAGAAATG 8645 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAAAGTACA ATATGTTATT GAAATCTTAG CCACCTCAAG ATAACAAACT AAAAGAAATG 129 TGGATAATAC AAAAGACAAG TAATGAACAA AACTCAACCA TTTTGAACAA GAAAGAGGTG 8585 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGATAATAC AAAAGACAAG TAATGAACAA AACTCAACCA TTTTGAACAA GAAAGAGGTG 189 GCTACACTCA TGATGAATCT ACTTATTAAG CAACTTCAAG AGTACTTGTA GGCATCTCCA 8525 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTACACTCA TGATGAATCT ACTTATTAAG CAACTTCAAG AGTACTTGTA GGCATCTCCA 249 ATGGGAAATT TGTTGTTTCA TTGTGAGTAG AGCCATAAGG ACAGAACATT ATCTTGTAGT 8465 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGGAAATT TGTTGTTTCA TTGTGAGTAG AGCCATAAGG ACAGAACATT ATCTTGTAGT 309 CTGTAGTCCA ACTCTGACAA GTAAAAGTAC TAGTTGGATC GTCTTGAGGG TAACTATAGG 8405 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTAGTCCA ACTCTGACAA GTAAAAGTAC TAGTTGGATC GTCTTGAGGG TAACTATAGG 369 CATCAGGACA TCTTTGTTTG AAAAATCTTG ACAATTCAGT AGGACCACAT GGACCGTGAT 8345 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCAGGACA TCTTTGTTTG AAAAATCTTG ACAATTCAGT AGGACCACAT GGACCGTGAT 429 TACAACAATA TTGTTGTCCT CCGAATGTTG TACAAGGGTT GTTACATCCT CCAGGTACCC 8285 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACAACAATA TTGTTGTCCT CCGAATGTTG TACAAGGGTT GTTACATCCT CCAGGTACCC 489 TAAGTGAACC AGGGCATTCA CCGTTTATAT TGGCTGTGCA TTGAATTGGA TGACATTTTC 8225 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGTGAACC AGGGCATTCA CCGTTTATAT TGGCTGTGCA TTGAATTGGA TGACATTTTC 549 CAGGGCCAGG CTTAGTTGGG CCAAAAGACA TAGGGATGTT GAATCCATCA ATAACA 8169 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| CAGGGCCAGG CTTAGTTGGG CCAAAAGACA TAGGGATGTT GAATCCATCA ATAACA 605 hqPGS_C08HBa0235H18.1-_SGN-E353161- (8764 8169) ******************************************************************************** EST sequence 339 -strand 598 n (File: SGN-E354792-) 1 TTTTTTTTTT TACTCCAAAT GCACTCTTGT GTGAGAATTT TGAACATCAT GTGTAAGACA 61 AATTAAAGTA CAATATGTTA TTGAAATCTT AGCCACCTCA AGATAACAAA CTAAAAGAAA 121 TGTGGATAAT ACAAAAGACA AGTAATGAAC AAAACTCAAC CATTTTGAAC AAGAAAGAGG 181 TGGCTACACT CATGATGAAT CTACTTATTA AGCAACTTCA AGAGTACTTG TAGGCATCTC 241 CAATGGGAAA TTTGTTGTTT CATTGTGAGT AGAGCCATAA GGACAGAACA TTATCTTGTA 301 GTCTGTAGTC CAACTCTGAC AAGTAAAAGT ACTAGTTGGA TCGTCTTGAG GGTAACTATA 361 GGCATCAGGA CATCTTTGTT TGAAAAATCT TGACAATTCA GTAGGACCAC ATGGACCGTG 421 ATTACAACAA TATTGTTGTC CTCCGAATGT TGTACAAGGG TTGTTACATC CTCCAGGTAC 481 CCTAAGTGAA CCAGGGCATT CACCGTTTAT ATTGGCTGTG CATTGAATTG GATGACATTT 541 TCCAGGGCCA GGCTTAGTTG GGCCAAAAGA CATAGGGATG TTGAATCCAT CAATAACA Predicted gene structure (within gDNA segment 9466 to 7569): Exon 1 8764 8169 ( 596 n); cDNA 3 598 ( 596 n); score: 0.990 MATCH C08HBa0235H18.1- SGN-E354792- 0.990 596 0.997 C PGS_C08HBa0235H18.1-_SGN-E354792- (8764 8169) Alignment (genomic DNA sequence = upper lines): TTAAACGATA CTCCAAATGC ACTCTTGTGT GAGAATTTTG AACATCATGT GTAAGACAAA 8705 || || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTTTTTTA CTCCAAATGC ACTCTTGTGT GAGAATTTTG AACATCATGT GTAAGACAAA 62 TTAAAGTACA ATATGTTATT GAAATCTTAG CCACCTCAAG ATAACAAACT AAAAGAAATG 8645 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAAAGTACA ATATGTTATT GAAATCTTAG CCACCTCAAG ATAACAAACT AAAAGAAATG 122 TGGATAATAC AAAAGACAAG TAATGAACAA AACTCAACCA TTTTGAACAA GAAAGAGGTG 8585 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGATAATAC AAAAGACAAG TAATGAACAA AACTCAACCA TTTTGAACAA GAAAGAGGTG 182 GCTACACTCA TGATGAATCT ACTTATTAAG CAACTTCAAG AGTACTTGTA GGCATCTCCA 8525 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTACACTCA TGATGAATCT ACTTATTAAG CAACTTCAAG AGTACTTGTA GGCATCTCCA 242 ATGGGAAATT TGTTGTTTCA TTGTGAGTAG AGCCATAAGG ACAGAACATT ATCTTGTAGT 8465 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGGAAATT TGTTGTTTCA TTGTGAGTAG AGCCATAAGG ACAGAACATT ATCTTGTAGT 302 CTGTAGTCCA ACTCTGACAA GTAAAAGTAC TAGTTGGATC GTCTTGAGGG TAACTATAGG 8405 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTAGTCCA ACTCTGACAA GTAAAAGTAC TAGTTGGATC GTCTTGAGGG TAACTATAGG 362 CATCAGGACA TCTTTGTTTG AAAAATCTTG ACAATTCAGT AGGACCACAT GGACCGTGAT 8345 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCAGGACA TCTTTGTTTG AAAAATCTTG ACAATTCAGT AGGACCACAT GGACCGTGAT 422 TACAACAATA TTGTTGTCCT CCGAATGTTG TACAAGGGTT GTTACATCCT CCAGGTACCC 8285 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACAACAATA TTGTTGTCCT CCGAATGTTG TACAAGGGTT GTTACATCCT CCAGGTACCC 482 TAAGTGAACC AGGGCATTCA CCGTTTATAT TGGCTGTGCA TTGAATTGGA TGACATTTTC 8225 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGTGAACC AGGGCATTCA CCGTTTATAT TGGCTGTGCA TTGAATTGGA TGACATTTTC 542 CAGGGCCAGG CTTAGTTGGG CCAAAAGACA TAGGGATGTT GAATCCATCA ATAACA 8169 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| CAGGGCCAGG CTTAGTTGGG CCAAAAGACA TAGGGATGTT GAATCCATCA ATAACA 598 hqPGS_C08HBa0235H18.1-_SGN-E354792- (8764 8169) ******************************************************************************** EST sequence 18 -strand 592 n (File: SGN-E351033-) 1 TTTTTTTTTT TTCAAATGCA CTGTTGTTTT ATACATCTAA GACAAAAGTA CACATGAGAT 61 GTAACTCTTA TTCCGGTCTT TAAGTTTGTT ACGAACTCTT ATCAATAAAG TAAAAGTGAA 121 TATTTAAAAA ACTGAGCTAT TAAGATTTTT CATTACGGTA GAGATCAGTT GACTAATTGA 181 GGCGATTTAA AATGAAGAAA CTCAAATTCA CTTGGCCACT TCATCAGTAC TTGCAGGCAT 241 CTCCAAGGGG AAATTTGGAT CAGCAACACC ATTAGGACAA AAGACAACCC TATAGTTTGT 301 ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC 361 GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA 421 ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG 481 GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC 541 ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AA Predicted gene structure (within gDNA segment 13732 to 6516): Exon 1 8555 8176 ( 380 n); cDNA 215 585 ( 371 n); score: 0.792 PPA cDNA 12 1 MATCH C08HBa0235H18.1- SGN-E351033- 0.792 380 0.642 C PGS_C08HBa0235H18.1-_SGN-E351033- (8555 8176) Alignment (genomic DNA sequence = upper lines): GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA 8496 || |||||| |||||||| |||||||||| || ||||||| ||| | || | | | | GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTG--G-ATC A--G-CA--A 266 GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA 8436 | |||| || |||| || | | | | ||| | |||| | | || | || |||||| || CA-CCATTAG GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA AGTAAATGTG 325 CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT GAAAAATCTT 8376 || || |||| ||||||| || ||| ||||| ||||| |||| |||||| || ||||||| | CTTGTAGGAT CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG 385 GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC TCCGAATGTT 8316 ||||| || | |||| ||||| |||||| || | ||||||| |||||||||| ||| || || GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG 445 GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC ACCGTTTATA 8256 |||||||||| |||||||||| |||||||||| |||| | | ||| ||||| ||| |||||| GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC ACCATTTATA 505 TTGGCTGTGC ATTGAATTGG ATGACATTTT CCAGGGCCAG GCTTAGTTGG GCCAAAAGAC 8196 ||||| |||| | ||||||| ||||||||| || | || | || ||||| | |||||| | TTGGCCGTGC AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC 565 ATAGGGATGT TGAATCCATC 8176 || || || | | |||||||| ATTGGAATAT TAAATCCATC 585 hqPGS_C08HBa0235H18.1-_SGN-E351033- (8555 8176) ******************************************************************************** EST sequence 361 -strand 591 n (File: SGN-E356290-) 1 TTTTTTTTTT TCAAATGCAC TGTTGTTTTA TACATCTAAG ACAAAAGTAC ACATGAGATG 61 TAACTCTTAT TCCGGTCTTT AAGTTTGTTA CGAACTCTTA TCAATAAAGT AAAAGTGAAT 121 ATTTAAAAAA CTGAGCTATT AAGATTTTTC ATTACGGTAG AGATCAGTTG ACTAATTGAG 181 GCGATTTAAA ATGAAGAAAC TCAAATTCAC TTGGCCACTT CATCAGTACT TGCAGGCATC 241 TCCAAGGGGA AATTTGGATC AGCAACACCA TTAGGACAAA AGACAACCCT ATAGTTTGTA 301 CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT ATAAGCATCG 361 GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC TTGGGTGCAA 421 CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG 481 GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA 541 CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA A Predicted gene structure (within gDNA segment 13122 to 6516): Exon 1 8555 8176 ( 380 n); cDNA 214 584 ( 371 n); score: 0.792 PPA cDNA 11 1 MATCH C08HBa0235H18.1- SGN-E356290- 0.792 380 0.643 C PGS_C08HBa0235H18.1-_SGN-E356290- (8555 8176) Alignment (genomic DNA sequence = upper lines): GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA 8496 || |||||| |||||||| |||||||||| || ||||||| ||| | || | | | | GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTG--G-ATC A--G-CA--A 265 GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA 8436 | |||| || |||| || | | | | ||| | |||| | | || | || |||||| || CA-CCATTAG GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA AGTAAATGTG 324 CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT GAAAAATCTT 8376 || || |||| ||||||| || ||| ||||| ||||| |||| |||||| || ||||||| | CTTGTAGGAT CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG 384 GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC TCCGAATGTT 8316 ||||| || | |||| ||||| |||||| || | ||||||| |||||||||| ||| || || GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG 444 GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC ACCGTTTATA 8256 |||||||||| |||||||||| |||||||||| |||| | | ||| ||||| ||| |||||| GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC ACCATTTATA 504 TTGGCTGTGC ATTGAATTGG ATGACATTTT CCAGGGCCAG GCTTAGTTGG GCCAAAAGAC 8196 ||||| |||| | ||||||| ||||||||| || | || | || ||||| | |||||| | TTGGCCGTGC AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC 564 ATAGGGATGT TGAATCCATC 8176 || || || | | |||||||| ATTGGAATAT TAAATCCATC 584 hqPGS_C08HBa0235H18.1-_SGN-E356290- (8555 8176) ******************************************************************************** EST sequence 415 -strand 346 n (File: SGN-E260107-) 1 TCATCAGTAC TGGCAGGCAT CTCCAAGGGG AAATTTGGAT CAGCAACACC ATTAGGACAA 61 AAGCCAACCT TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT 121 TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG 181 CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA 241 CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA 301 ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCA Predicted gene structure (within gDNA segment 10932 to 6776): Exon 1 8549 8195 ( 355 n); cDNA 1 346 ( 346 n); score: 0.789 MATCH C08HBa0235H18.1- SGN-E260107- 0.789 355 1.026 C PGS_C08HBa0235H18.1-_SGN-E260107- (8549 8195) Alignment (genomic DNA sequence = upper lines): TCAAGAGTAC TTGTAGGCAT CTCCAATGGG AAATTTGTTG TTTCATTGTG AGTAGAGCCA 8490 ||| ||||| | | |||||| |||||| ||| ||||||| | ||| | | | | ||| TCATCAGTAC TGGCAGGCAT CTCCAAGGGG AAATTTG--G -ATCA--G-C A--ACA-CCA 51 TAAGGACAGA ACATTATCTT GTAGTCTGTA GTCCAACTCT GACAAGTAAA AGTACTAGTT 8430 | |||||| | | | ||| |||| |||| | | || | |||||||| || || || TTAGGACAAA AGCCAACCTT ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA 111 GGATCGTCTT GAGGGTAACT ATAGGCATCA GGACATCTTT GTTTGAAAAA TCTTGACAAT 8370 |||||||||| | ||||| || ||| ||||| |||||||||| |||||||| | | ||||| GGATCGTCTT GTGGGTAGCT ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC 171 TCAGTAGGAC CACATGGACC GTGATTACAA CAATATTGTT GTCCTCCGAA TGTTGTACAA 8310 || ||||| | |||||||||| || | ||| |||||||||| ||||||| || || |||||| TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA 231 GGGTTGTTAC ATCCTCCAGG TACCCTAAGT GAACCAGGGC ATTCACCGTT TATATTGGCT 8250 |||||||||| |||||||||| |||| |||| | | ||| | ||||||| || ||||||||| GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC 291 GTGCATTGAA TTGGATGACA TTTTCCAGGG CCAGGCTTAG TTGGGCCAAA AGACA 8195 ||||| |||| ||| ||||| |||||| | ||| || | ||||| |||| || || GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCA 346 hqPGS_C08HBa0235H18.1-_SGN-E260107- (8549 8195) ******************************************************************************** EST sequence 243 -strand 555 n (File: SGN-E214114-) 1 TTTTTTTTTT TTTTTTCAAA TGCACTGTTG TTTTATACAT CTAAGACAAA AGTACACATG 61 AGATGTAACT CTTATTCCGG TCTTTAAGTT TGTTACGAAC TCTTATCAAT AAAGTAAAAG 121 TGAATATTTA AAAAACTGAG CTATTAAGAT TTTTCATTAC GGTAGAGATC AGTTGACTAA 181 TTGAGGCGAT TTAAAATGAA GAAACTCAAA TTCACTTGGC CACTTCATCA GTACTTGCAG 241 GCATCTCCAA GGGGAAATTT GGATCAGCAA CACCATTAGG ACAAAAGACA ACCCTATAGT 301 TTGTACTACC ACCAGGGCAA GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG 361 CATCGGGACA TCTTTTCTTG AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG 421 TGCAACAATA TTGTTGTCCT CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT 481 TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC 541 CTCCACTAGG TTTTG Predicted gene structure (within gDNA segment 13172 to 6926): Exon 1 8555 8212 ( 344 n); cDNA 219 553 ( 335 n); score: 0.791 PPA cDNA 16 1 MATCH C08HBa0235H18.1- SGN-E214114- 0.791 344 0.620 C PGS_C08HBa0235H18.1-_SGN-E214114- (8555 8212) Alignment (genomic DNA sequence = upper lines): GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA 8496 || |||||| |||||||| |||||||||| || ||||||| ||| | || | | | | GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTG--G-ATC A--G-CA--A 270 GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA 8436 | |||| || |||| || | | | | ||| | |||| | | || | || |||||| || CA-CCATTAG GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA AGTAAATGTG 329 CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT GAAAAATCTT 8376 || || |||| ||||||| || ||| ||||| ||||| |||| |||||| || ||||||| | CTTGTAGGAT CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG 389 GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC TCCGAATGTT 8316 ||||| || | |||| ||||| |||||| || | ||||||| |||||||||| ||| || || GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG 449 GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC ACCGTTTATA 8256 |||||||||| |||||||||| |||||||||| |||| | | ||| ||||| ||| |||||| GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC ACCATTTATA 509 TTGGCTGTGC ATTGAATTGG ATGACATTTT CCAGGGCCAG GCTT 8212 ||||| |||| | ||||||| ||||||||| || | || | || TTGGCCGTGC AATGAATTGC GTGACATTTT CCTCCACTAG GTTT 553 hqPGS_C08HBa0235H18.1-_SGN-E214114- (8555 8212) ******************************************************************************** EST sequence 365 -strand 499 n (File: SGN-E356548-) 1 TTTTTTTTTT TTACACATGA GATGTAACTC TTATTCCGGT CTTTAAGTTT GTTACGAACT 61 CTTATCAATA AAGTAAAAGT GAATATTTAA AAAACTGAGC TATTAAGATT TTTCATTACG 121 GTAGAGATCA GTTGACTAAT TGAGGCGATT TAAAATGAAG AAACTCAAAT TCACTTGGCC 181 ACTTCATCAG TACTTGCAGG CATCTCCAAG GGGAAATTTG GATCAGCAAC ACCATTAGGA 241 CAAAAGACAA CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT TGTAGGATCG 301 TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA CAACTCTGTA 361 GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT ACAAGGGTTG 421 TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT GGCCGTGCAA 481 TGAATTGCGT GACATTTTC Predicted gene structure (within gDNA segment 13962 to 7076): Exon 1 8555 8225 ( 331 n); cDNA 178 499 ( 322 n); score: 0.801 PPA cDNA 12 1 MATCH C08HBa0235H18.1- SGN-E356548- 0.801 331 0.663 C PGS_C08HBa0235H18.1-_SGN-E356548- (8555 8225) Alignment (genomic DNA sequence = upper lines): GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA 8496 || |||||| |||||||| |||||||||| || ||||||| ||| | || | | | | GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTG--G-ATC A--G-CA--A 229 GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA 8436 | |||| || |||| || | | | | ||| | |||| | | || | || |||||| || CA-CCATTAG GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA AGTAAATGTG 288 CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT GAAAAATCTT 8376 || || |||| ||||||| || ||| ||||| ||||| |||| |||||| || ||||||| | CTTGTAGGAT CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG 348 GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC TCCGAATGTT 8316 ||||| || | |||| ||||| |||||| || | ||||||| |||||||||| ||| || || GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG 408 GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC ACCGTTTATA 8256 |||||||||| |||||||||| |||||||||| |||| | | ||| ||||| ||| |||||| GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC ACCATTTATA 468 TTGGCTGTGC ATTGAATTGG ATGACATTTT C 8225 ||||| |||| | ||||||| ||||||||| | TTGGCCGTGC AATGAATTGC GTGACATTTT C 499 hqPGS_C08HBa0235H18.1-_SGN-E356548- (8555 8225) ******************************************************************************** EST sequence 926 +strand 513 n (File: SGN-E206137+) 1 TTTTTTTGTG AGAATTTTGA ACATCATGTG TAAGACAAAT TAAAGTACAA TATGTTATTG 61 AAATCTTAGC CACCTCAAGA TAACAAACTA AAAGAAATGT GGATAATACA AAAGACAAGT 121 AATGAACAAA ACTCAACCAT TTTGAACAAG AAAGAGGTGG CTACACTCAT GATGAATCTA 181 CTTATTAAGC AACTTCAAGA GTACTTGTAG GCATCTCCAA TGGGAAATTT GTTGTTTCAT 241 TGTGAGTAGA GCCATAAGGA CAGAACATTA TCTTGTAGTC TGTAGTCCAA CTCTGACAAG 301 TAAAAGTACT AGTTGGATCG TCTTGAGGGT AACTATAGGC ATCAGGACAT CTTTGTTTGA 361 AAAATCTTGA CAATTCAGTA GGACCACATG GACCGTGATT ACAACAATAT TGTTGTCCTC 421 CGAATGTTGT ACAAGGGTTG TTACATCCTC CAGGTACCCT AAGTGAACCA GGGCATTCAC 481 CGTTTATATT GGCTGTGCAT TGAATTGGAT GAC Predicted gene structure (within gDNA segment 9397 to 7621): Exon 1 8740 8231 ( 510 n); cDNA 4 513 ( 510 n); score: 0.998 MATCH C08HBa0235H18.1- SGN-E206137+ 0.998 510 0.994 C PGS_C08HBa0235H18.1-_SGN-E206137+ (8740 8231) Alignment (genomic DNA sequence = upper lines): TTGTGTGAGA ATTTTGAACA TCATGTGTAA GACAAATTAA AGTACAATAT GTTATTGAAA 8681 || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTGTGAGA ATTTTGAACA TCATGTGTAA GACAAATTAA AGTACAATAT GTTATTGAAA 63 TCTTAGCCAC CTCAAGATAA CAAACTAAAA GAAATGTGGA TAATACAAAA GACAAGTAAT 8621 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTAGCCAC CTCAAGATAA CAAACTAAAA GAAATGTGGA TAATACAAAA GACAAGTAAT 123 GAACAAAACT CAACCATTTT GAACAAGAAA GAGGTGGCTA CACTCATGAT GAATCTACTT 8561 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAACAAAACT CAACCATTTT GAACAAGAAA GAGGTGGCTA CACTCATGAT GAATCTACTT 183 ATTAAGCAAC TTCAAGAGTA CTTGTAGGCA TCTCCAATGG GAAATTTGTT GTTTCATTGT 8501 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAAGCAAC TTCAAGAGTA CTTGTAGGCA TCTCCAATGG GAAATTTGTT GTTTCATTGT 243 GAGTAGAGCC ATAAGGACAG AACATTATCT TGTAGTCTGT AGTCCAACTC TGACAAGTAA 8441 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGTAGAGCC ATAAGGACAG AACATTATCT TGTAGTCTGT AGTCCAACTC TGACAAGTAA 303 AAGTACTAGT TGGATCGTCT TGAGGGTAAC TATAGGCATC AGGACATCTT TGTTTGAAAA 8381 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTACTAGT TGGATCGTCT TGAGGGTAAC TATAGGCATC AGGACATCTT TGTTTGAAAA 363 ATCTTGACAA TTCAGTAGGA CCACATGGAC CGTGATTACA ACAATATTGT TGTCCTCCGA 8321 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCTTGACAA TTCAGTAGGA CCACATGGAC CGTGATTACA ACAATATTGT TGTCCTCCGA 423 ATGTTGTACA AGGGTTGTTA CATCCTCCAG GTACCCTAAG TGAACCAGGG CATTCACCGT 8261 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGTTGTACA AGGGTTGTTA CATCCTCCAG GTACCCTAAG TGAACCAGGG CATTCACCGT 483 TTATATTGGC TGTGCATTGA ATTGGATGAC 8231 |||||||||| |||||||||| |||||||||| TTATATTGGC TGTGCATTGA ATTGGATGAC 513 hqPGS_C08HBa0235H18.1-_SGN-E206137+ (8740 8231) ******************************************************************************** EST sequence 61 -strand 537 n (File: SGN-E351855-) 1 TTTTTTTTTT TTTTTACTCC AAATGCACTC TTGTGTGAGA ATTTTGAACA TCATGTGTAA 61 GACAAATTAA AGTACAATAT GTTATTGAAA TCTTAGCCAC CTCAAGATAA CAAACTAAAA 121 GAAATGTGGA TAATACAAAA GACAAGTAAT GAACAAAACT CAACCATTTT GAACAAGAAA 181 GAGGTGGCTA CACTCATGAT GAATCTACTT ATTAAGCAAC TTCAAGAGTA CTTGTAGGCA 241 TCTCCAATGG GAAATTTGTT GTTTCATTGT GAGTAGAGCC ATAAGGACAG AACATTATCT 301 TGTAGTCTGT AGTCCAACTC TGACAAGTAA AAGTACTAGT TGGATCGTCT TGAGGGTAAC 361 TATAGGCATC AGGACATCTT TGTTTGAAAA ATCTTGACAA TTCAGTAGGA CCACATGGAC 421 CGTGATTACA ACAATATTGT TGTCCTCCGA ATGTTGTACA AGGGTTGTTA CATCCTCCAG 481 GTACCCTAAG TGAACCAGGG CATTCACCGT TTATATTGGC TGTGCATTGA ATTGGAT Predicted gene structure (within gDNA segment 9506 to 7634): Exon 1 8753 8234 ( 520 n); cDNA 18 537 ( 520 n); score: 1.000 PPA cDNA 15 1 MATCH C08HBa0235H18.1- SGN-E351855- 1.000 520 0.968 C PGS_C08HBa0235H18.1-_SGN-E351855- (8753 8234) Alignment (genomic DNA sequence = upper lines): TCCAAATGCA CTCTTGTGTG AGAATTTTGA ACATCATGTG TAAGACAAAT TAAAGTACAA 8694 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCAAATGCA CTCTTGTGTG AGAATTTTGA ACATCATGTG TAAGACAAAT TAAAGTACAA 77 TATGTTATTG AAATCTTAGC CACCTCAAGA TAACAAACTA AAAGAAATGT GGATAATACA 8634 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATGTTATTG AAATCTTAGC CACCTCAAGA TAACAAACTA AAAGAAATGT GGATAATACA 137 AAAGACAAGT AATGAACAAA ACTCAACCAT TTTGAACAAG AAAGAGGTGG CTACACTCAT 8574 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGACAAGT AATGAACAAA ACTCAACCAT TTTGAACAAG AAAGAGGTGG CTACACTCAT 197 GATGAATCTA CTTATTAAGC AACTTCAAGA GTACTTGTAG GCATCTCCAA TGGGAAATTT 8514 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGAATCTA CTTATTAAGC AACTTCAAGA GTACTTGTAG GCATCTCCAA TGGGAAATTT 257 GTTGTTTCAT TGTGAGTAGA GCCATAAGGA CAGAACATTA TCTTGTAGTC TGTAGTCCAA 8454 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGTTTCAT TGTGAGTAGA GCCATAAGGA CAGAACATTA TCTTGTAGTC TGTAGTCCAA 317 CTCTGACAAG TAAAAGTACT AGTTGGATCG TCTTGAGGGT AACTATAGGC ATCAGGACAT 8394 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCTGACAAG TAAAAGTACT AGTTGGATCG TCTTGAGGGT AACTATAGGC ATCAGGACAT 377 CTTTGTTTGA AAAATCTTGA CAATTCAGTA GGACCACATG GACCGTGATT ACAACAATAT 8334 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTGTTTGA AAAATCTTGA CAATTCAGTA GGACCACATG GACCGTGATT ACAACAATAT 437 TGTTGTCCTC CGAATGTTGT ACAAGGGTTG TTACATCCTC CAGGTACCCT AAGTGAACCA 8274 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTGTCCTC CGAATGTTGT ACAAGGGTTG TTACATCCTC CAGGTACCCT AAGTGAACCA 497 GGGCATTCAC CGTTTATATT GGCTGTGCAT TGAATTGGAT 8234 |||||||||| |||||||||| |||||||||| |||||||||| GGGCATTCAC CGTTTATATT GGCTGTGCAT TGAATTGGAT 537 hqPGS_C08HBa0235H18.1-_SGN-E351855- (8753 8234) ******************************************************************************** EST sequence 23 -strand 537 n (File: SGN-E351304-) 1 TTTTTTTTTT TTTTAAACGA TACTCCAAAT GCACTCTTGT GTGAGAATTT TGAACATCAT 61 GTGTAAGACA AATTAAAGTA CAATATGTTA TTGAAATCTT AGCCACCTCA AGATAACAAA 121 CTAAAAGAAA TGTGGATAAT ACAAAAGACA AGTAATGAAC AAAACTCAAC CATTTTGAAC 181 AAGAAAGAGG TGGCTACACT CATGATGAAT CTACTTATTA AGCAACTTCA AGAGTACTTG 241 TAGGCATCTC CAATGGGAAA TTTGTTGTTT CATTGTGAGT AGAGCCATAA GGACAGAACA 301 TTATCTTGTA GTCTGTAGTC CAACTCTGAC AAGTAAAAGT ACTAGTTGGA TCGTCTTGAG 361 GGTAACTATA GGCATCAGGA CATCTTTGTT TGAAAAATCT TGACAATTCA GTAGGACCAC 421 ATGGACCGTG ATTACAACAA TATTGTTGTC CTCCGAATGT TGTACAAGGG TTGTTACATC 481 CTCCAGGTAC CCTAAGTGAA CCAGGGCATT CACCGTTTAT ATTGGCTGTG CATTGAA Predicted gene structure (within gDNA segment 9494 to 7640): Exon 1 8764 8240 ( 525 n); cDNA 13 537 ( 525 n); score: 1.000 PPA cDNA 12 1 MATCH C08HBa0235H18.1- SGN-E351304- 1.000 525 0.978 C PGS_C08HBa0235H18.1-_SGN-E351304- (8764 8240) Alignment (genomic DNA sequence = upper lines): TTAAACGATA CTCCAAATGC ACTCTTGTGT GAGAATTTTG AACATCATGT GTAAGACAAA 8705 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAAACGATA CTCCAAATGC ACTCTTGTGT GAGAATTTTG AACATCATGT GTAAGACAAA 72 TTAAAGTACA ATATGTTATT GAAATCTTAG CCACCTCAAG ATAACAAACT AAAAGAAATG 8645 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAAAGTACA ATATGTTATT GAAATCTTAG CCACCTCAAG ATAACAAACT AAAAGAAATG 132 TGGATAATAC AAAAGACAAG TAATGAACAA AACTCAACCA TTTTGAACAA GAAAGAGGTG 8585 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGATAATAC AAAAGACAAG TAATGAACAA AACTCAACCA TTTTGAACAA GAAAGAGGTG 192 GCTACACTCA TGATGAATCT ACTTATTAAG CAACTTCAAG AGTACTTGTA GGCATCTCCA 8525 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTACACTCA TGATGAATCT ACTTATTAAG CAACTTCAAG AGTACTTGTA GGCATCTCCA 252 ATGGGAAATT TGTTGTTTCA TTGTGAGTAG AGCCATAAGG ACAGAACATT ATCTTGTAGT 8465 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGGAAATT TGTTGTTTCA TTGTGAGTAG AGCCATAAGG ACAGAACATT ATCTTGTAGT 312 CTGTAGTCCA ACTCTGACAA GTAAAAGTAC TAGTTGGATC GTCTTGAGGG TAACTATAGG 8405 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTAGTCCA ACTCTGACAA GTAAAAGTAC TAGTTGGATC GTCTTGAGGG TAACTATAGG 372 CATCAGGACA TCTTTGTTTG AAAAATCTTG ACAATTCAGT AGGACCACAT GGACCGTGAT 8345 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCAGGACA TCTTTGTTTG AAAAATCTTG ACAATTCAGT AGGACCACAT GGACCGTGAT 432 TACAACAATA TTGTTGTCCT CCGAATGTTG TACAAGGGTT GTTACATCCT CCAGGTACCC 8285 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACAACAATA TTGTTGTCCT CCGAATGTTG TACAAGGGTT GTTACATCCT CCAGGTACCC 492 TAAGTGAACC AGGGCATTCA CCGTTTATAT TGGCTGTGCA TTGAA 8240 |||||||||| |||||||||| |||||||||| |||||||||| ||||| TAAGTGAACC AGGGCATTCA CCGTTTATAT TGGCTGTGCA TTGAA 537 hqPGS_C08HBa0235H18.1-_SGN-E351304- (8764 8240) ******************************************************************************** EST sequence 851 +strand 528 n (File: SGN-E298580+) 1 AGAACTAGTC TCGAGTTTTT TTTTTTTTTT TTTTTTTTGC AAACGCACTG TTGTTTTATA 61 CATCTAAGAC AAAAGTACAC ATGAGATGTA ACTCTTATTC CGGTCTTTAA GTTTGTTACG 121 AACTCTTATC AATAAAGTAA AAGTGAATAT TTAAAAAACT GAGCTATTAA GATTTTTCAT 181 TACGGTAGAG ATCAGTTGAC TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT 241 GGCCACTTCA TCAGTACTTG CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT 301 AGGACAAAAG ACAACCCTAT AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG 361 ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC 421 TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG 481 GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATT Predicted gene structure (within gDNA segment 13392 to 7416): Exon 1 8555 8260 ( 296 n); cDNA 242 528 ( 287 n); score: 0.791 PPA cDNA 38 15 MATCH C08HBa0235H18.1- SGN-E298580+ 0.791 296 0.561 C PGS_C08HBa0235H18.1-_SGN-E298580+ (8555 8260) Alignment (genomic DNA sequence = upper lines): GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA 8496 || |||||| |||||||| |||||||||| || ||||||| ||| | || | | | | GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTG--G-ATC A--G-CA--A 293 GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA 8436 | |||| || |||| || | | | | ||| | |||| | | || | || |||||| || CA-CCATTAG GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA AGTAAATGTG 352 CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT GAAAAATCTT 8376 || || |||| ||||||| || ||| ||||| ||||| |||| |||||| || ||||||| | CTTGTAGGAT CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG 412 GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC TCCGAATGTT 8316 ||||| || | |||| ||||| |||||| || | ||||||| |||||||||| ||| || || GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG 472 GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC ACCGTT 8260 |||||||||| |||||||||| |||||||||| |||| | | ||| ||||| ||| || GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC ACCATT 528 hqPGS_C08HBa0235H18.1-_SGN-E298580+ (8555 8260) ******************************************************************************** EST sequence 1007 +strand 486 n (File: SGN-E276361+) 1 GAGAACTAGT CTCGAGTTTT TTTTTTTTTT TTTTACACAT GAGATGTAAC TCTTATTCCG 61 GTCTTTAAGT TTGTTACGAA CTCTTATCAA TAAAGTAAAA GTGAATATTT AAAAAACTGA 121 GCTATTAAGA TTTTTCATTA CGGTAGAGAT CAGTTGACTA ATTGAGGCGA TTTAAAATGA 181 AGAAACTCAA ATTCACTTGG CCACTTCATC AGTACTTGCA GGCATCTCCA AGGGGAAATT 241 TGGATCAGCA ACACCATTAG GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA 301 AGTAAATGTG CTTGTAGGAT CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT 361 GAAAAATTTG GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC 421 TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC 481 ACCATT Predicted gene structure (within gDNA segment 12972 to 7416): Exon 1 8555 8260 ( 296 n); cDNA 200 486 ( 287 n); score: 0.791 PPA cDNA 34 16 MATCH C08HBa0235H18.1- SGN-E276361+ 0.791 296 0.609 C PGS_C08HBa0235H18.1-_SGN-E276361+ (8555 8260) Alignment (genomic DNA sequence = upper lines): GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA 8496 || |||||| |||||||| |||||||||| || ||||||| ||| | || | | | | GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTG--G-ATC A--G-CA--A 251 GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA 8436 | |||| || |||| || | | | | ||| | |||| | | || | || |||||| || CA-CCATTAG GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA AGTAAATGTG 310 CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT GAAAAATCTT 8376 || || |||| ||||||| || ||| ||||| ||||| |||| |||||| || ||||||| | CTTGTAGGAT CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG 370 GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC TCCGAATGTT 8316 ||||| || | |||| ||||| |||||| || | ||||||| |||||||||| ||| || || GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG 430 GTACAAGGGT TGTTACATCC TCCAGGTACC CTAAGTGAAC CAGGGCATTC ACCGTT 8260 |||||||||| |||||||||| |||||||||| |||| | | ||| ||||| ||| || GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC ACCATT 486 hqPGS_C08HBa0235H18.1-_SGN-E276361+ (8555 8260) ******************************************************************************** EST sequence 1021 +strand 399 n (File: SGN-E543859+) 1 ATATAAGACA AAGCATCGAT CATAGATTGT TATTCAGATC TTAGCCACTT CAAACAAACA 61 AATGTAAAAG AAATGTGTAC AAGGGAAATT AAAGACAATG TCCATCTTCA AAACAAATTT 121 AACAAAAAAG AGATTGGGTC AACTCAGGAT TTCTACTTAA TGAAGCCACT TCAAGAGTAT 181 TTGTAGGAAT CTCCAATGGG AAATTTGTTG GTTCATTGTG AGGAGAGCCA TAAGGACAAA 241 ACATAACCTT GTAGGCTGTA GTCCAGCTCT GACAAGTAAA AGTACTTGTT GGATCGTCTT 301 GAGGATAACT ATAGGCATCG GGACATCTTT GTTTGAAAAA TCTTGACAAA TCGGTAGGAC 361 CACATGGACC TTGAGGGGAA CAATATTGTT GTCCTCCGA Predicted gene structure (within gDNA segment 11713 to 7711): Exon 1 8713 8321 ( 393 n); cDNA 4 399 ( 396 n); score: 0.798 MATCH C08HBa0235H18.1- SGN-E543859+ 0.798 393 0.985 C PGS_C08HBa0235H18.1-_SGN-E543859+ (8713 8321) Alignment (genomic DNA sequence = upper lines): TAAGACAAAT TAAAGTACA- ATA-TGTTAT TGAAATCTTA GCCACCTCAA GATAACAAA- 8657 ||||||||| | | || | | |||||| | | |||||| ||||| |||| |||||| TAAGACAAAG CATCGATCAT AGATTGTTAT TCAGATCTTA GCCACTTCAA ACAAACAAAT 63 CTAAAAGAAA TGTGGATAAT ACAAAAGACA AGTAATGAAC AAAACTCAAC CATTTTGAAC 8597 ||||||||| |||| | || ||| | | |||| | | || || || ||| GTAAAAGAAA TGTGTACAAG GGAAATTAAA GACAATGTCC ATCTTCAAAA CAAATTTAAC 123 AAGAAAGAG- GTGGCTACAC TCATGATGAA TCTACTTA-T TAAGCAACTT CAAGAGTACT 8539 || |||||| ||| | || ||| ||| |||||||| | |||| |||| |||||||| | AAAAAAGAGA TTGGGTCAAC TCAGGAT--T TCTACTTAAT GAAGCCACTT CAAGAGTATT 181 TGTAGGCATC TCCAATGGGA AATTTGTTGT TTCATTGTGA GTAGAGCCAT AAGGACAGAA 8479 |||||| ||| |||||||||| ||||||||| |||||||||| | |||||||| ||||||| || TGTAGGAATC TCCAATGGGA AATTTGTTGG TTCATTGTGA GGAGAGCCAT AAGGACAAAA 241 CATTATCTTG TAGTCTGTAG TCCAACTCTG ACAAGTAAAA GTACTAGTTG GATCGTCTTG 8419 ||| | |||| ||| |||||| |||| ||||| |||||||||| ||||| |||| |||||||||| CATAACCTTG TAGGCTGTAG TCCAGCTCTG ACAAGTAAAA GTACTTGTTG GATCGTCTTG 301 AGGGTAACTA TAGGCATCAG GACATCTTTG TTTGAAAAAT CTTGACAATT CAGTAGGACC 8359 ||| |||||| |||||||| | |||||||||| |||||||||| |||||||| | | |||||||| AGGATAACTA TAGGCATCGG GACATCTTTG TTTGAAAAAT CTTGACAAAT CGGTAGGACC 361 ACATGGACCG TGATTACAAC AATATTGTTG TCCTCCGA 8321 ||||||||| ||| ||| |||||||||| |||||||| ACATGGACCT TGAGGGGAAC AATATTGTTG TCCTCCGA 399 hqPGS_C08HBa0235H18.1-_SGN-E543859+ (8713 8321) ******************************************************************************** EST sequence 1070 +strand 651 n (File: SGN-E394141+) 1 TTTTTTTTTT TTTTTTTTTT CTATCAATGT GATACTGGGG GAATATATAT ATATCTTTTT 61 AATGTTAATT AATCGAAATT GAGAAGCTGA AATTTCACCT ATAACATCAA GTATACACGT 121 TACCTATGCC CTGGTTGTTT ATAGCTGAAT TTCAAGCCCC TTTTCTTATT CTATTATTAC 181 ACCCCTAATG AAATGATTAA GGAACTTATT AAAGCAAAAC AACTAAATTC TTATTTTGCA 241 ATCTTTTCTT GTCATTCACA AGCGATAATT CTAAATCTTT TTCCTTCTCT CCATTTTATA 301 CAAGCTCTTG GGAAAATTGT ATATAATAGC AAACTAGTAA TCTAACTAAA TGGAGTAGCT 361 AGAGTTTGAT TTAATTGTGC TCCATAGCAA ACGTTAGCTA AAGTTTGTCA GGCGTCTCCC 421 TCCCAAAAAT CTCGCTCGCC ACTCTCCATT CTCGCTCGCC TATCTCGCTA TATACACAGA 481 AGTGTATAAA TTCTGTTTCT ATTTTGTATA AAGCGAGAGA AAATTGTATA TACACATGTA 541 AAAATATATA TCTTCGTGTT ATACACTTAA TTATACAAAT TACAAACATT TTACTTCAAA 601 TATTGCAAAG AAAAAGGCCA ACGAATTATA CAATTGTGAA TTATATAATT G Predicted gene structure (within gDNA segment 14707 to 8238): Exon 1 10420 10280 ( 141 n); cDNA 456 597 ( 142 n); score: 0.904 Intron 1 10279 10248 ( 32 n); Pd: 0.000 (s: 0.96), Pa: 0.000 (s: 0.88) Exon 2 10247 10207 ( 41 n); cDNA 598 636 ( 39 n); score: 0.878 Intron 2 10206 10030 ( 177 n); Pd: 0.438 (s: 0.88), Pa: 0.817 (s: 0) Exon 3 10029 10017 ( 13 n); cDNA 637 649 ( 13 n); score: 0.846 PPA cDNA 20 1 MATCH C08HBa0235H18.1- SGN-E394141+ 0.904 195 0.300 C PGS_C08HBa0235H18.1-_SGN-E394141+ (10420 10280,10247 10207,10029 10017) Alignment (genomic DNA sequence = upper lines): TCGCCTCTCT CTCTTTATAC ACAAAAGTGT ATAAATTGTG TTTCTGTTTT GTAT-AAGCG 10362 |||||| ||| | || ||||| ||| |||||| ||||||| || ||||| |||| |||| ||||| TCGCCTATCT CGCTATATAC ACAGAAGTGT ATAAATTCTG TTTCTATTTT GTATAAAGCG 515 AGAGAAAACT GTATATACAC ATGCAAAAAC ATATATCTTC GTGTTATACA CTTAATTATA 10302 |||||||| | |||||||||| ||| ||||| |||||||||| |||||||||| |||||||||| AGAGAAAATT GTATATACAC ATGTAAAAAT ATATATCTTC GTGTTATACA CTTAATTATA 575 CAATTTACAA ATATTTTACT TCAATTCAAT TGTAGACAAA TGCAAATTTT ATACAAATAT 10242 ||| |||||| | |||||||| || |||||| CAAATTACAA ACATTTTACT TC........ .......... .......... ....AAATAT 603 TGCAGCGAAA AAGGCGAACG AATTATACAA TTGCAGTGAA ATACAATTTT CTCTTGCTTT 10182 |||| |||| ||||| |||| |||||||||| ||| TGCAAAGAAA AAGGCCAACG AATTATACAA TTG--..... .......... .......... 636 ATACAACAGA AGTGTATAAA TTGTGTTTAT GTTTTTGTAT AAAGCGAGAG AAAAACATAT 10122 .......... .......... .......... .......... .......... .......... 636 ATTTTTTTCC TATACACTTA TAATTATGCA ATATACATAC ATTTTACTTC GATTCAATTG 10062 .......... .......... .......... .......... .......... .......... 636 TATGCAAAAT AAATTTTATA CAAATATTGC AGAGAATTAT ACAAT 10017 ||||||| | ||| .......... .......... .......... ..TGAATTAT ATAAT 649 hqPGS_C08HBa0235H18.1-_SGN-E394141+ (10420 10280,10247 10207,10029 10017) ******************************************************************************** EST sequence 834 +strand 605 n (File: SGN-E392605+) 1 TTTTTTTTTT TTTTTTTTTC CTATCAAATG TGATACTGTG GGAATATATA TATATATCTA 61 TAATGTTAAT TAATCGAAAT TGAGAAGCTG AAATTTCACC TATAACATCA AGTATACACG 121 TTACCTATGC CCTGGTTGTT TATAGCTGAA TTTCAAGCCC CTTTTCTTAT TCTATTATTA 181 CACCCCTAAT GAAATGATTA AGGAACTTAT TAAAGCAAAA CAACTAAATT CTTATTTTGC 241 AATCTTTTCT TGTCATTCAC AAGCGATAAT TCTAAATCTT TTTCCTTCTC TCCATTTTAT 301 ACAAGCTCTT GGGAAAATTG TATATAATAG CAAACTAGTA ATCTAACTAA ATGGAGTAGC 361 TAGAGTTTGA TTTAATTGTG CTCCATAGCA AACGTTAGCT AAAGTTTGTC AGGCGTCTCC 421 CTCCCAAAAA TCTCGCTCGC CACTCTCCAT TCTCGCTCGC CTATCTCGCT ATATACACAG 481 AAGTGTATAA ATTCTGTTTC TATTTTGTAT AAAGCGAGAG AAAATTGTAT ATACACATGT 541 AAAAATATAT ATCTTCGTGT TATACACTTA ATTATACAAA TTACAAACAT TTTACTTCAA 601 ATATT Predicted gene structure (within gDNA segment 14717 to 8708): Exon 1 10524 10410 ( 115 n); cDNA 310 423 ( 114 n); score: 0.887 Intron 1 10409 10237 ( 173 n); Pd: 0.000 (s: 0.90), Pa: 0.958 (s: 0.42) Exon 2 10236 10128 ( 109 n); cDNA 424 524 ( 101 n); score: 0.679 PPA cDNA 19 1 MATCH C08HBa0235H18.1- SGN-E392605+ 0.786 224 0.370 C PGS_C08HBa0235H18.1-_SGN-E392605+ (10524 10410,10236 10128) Alignment (genomic DNA sequence = upper lines): TGGGATAATT GTATATAATA GCAAACTAAT AACCTAAAAT AAATGGAGTA GCTATGATTT 10465 ||||| |||| |||||||||| |||||||| | || |||| | |||||||||| |||| ||| TGGGAAAATT GTATATAATA GCAAACTAGT AATCTAA-CT AAATGGAGTA GCTAGAGTTT 368 GATTTAATTG TGCACCATAG CAAACGTTAG CCAAAGTTTG TCAGTCGCCT CTCTCTCTTT 10405 |||||||||| ||| |||||| |||||||||| | |||||||| |||| || || | ||| GATTTAATTG TGCTCCATAG CAAACGTTAG CTAAAGTTTG TCAGGCGTCT CCCTC..... 423 ATACACAAAA GTGTATAAAT TGTGTTTCTG TTTTGTATAA GCGAGAGAAA ACTGTATATA 10345 .......... .......... .......... .......... .......... .......... 423 CACATGCAAA AACATATATC TTCGTGTTAT ACACTTAATT ATACAATTTA CAAATATTTT 10285 .......... .......... .......... .......... .......... .......... 423 ACTTCAATTC AATTGTAGAC AAATGCAAAT TTTATACAAA TATTGCAGCG AAAAAGGCGA 10225 | ||||| | .......... .......... .......... .......... ........CC AAAAA-TC-- 432 ACGAATTATA CAATTGCAGT GAAATACAAT TTTCTCTTGC TTTATACAAC AGAAGTGTAT 10165 || | | | || | | | |||| || | ||||| || |||||||||| TCGCTCGCCA C-TCTCCATT CTCGCTCGCC TATCTC--GC TATATAC-AC AGAAGTGTAT 488 AAATTGTGTT TATGTTTTTG TATAAAGCGA GAGAAAA 10128 ||||| |||| | | ||||| |||||||||| ||||||| AAATTCTGTT TCT-ATTTTG TATAAAGCGA GAGAAAA 524 hqPGS_C08HBa0235H18.1-_SGN-E392605+ (10524 10410,10236 10128) ******************************************************************************** EST sequence 561 +strand 680 n (File: SGN-E379427+) 1 ACTTCAAATA TTGTTCAGAA AAAGGGCAAC GAATTATACA ATTGTGAATT ATATAATTGC 61 AGTGAAATAC AATTTTCTCT AACTTTATAC AACAGAAGTG TATATATTGT GTTTTTGTTT 121 TTGTATAAAG CGAGACAAAA ACATATATAT TCTTGCCATA CACTTATAAT TATGCAATAT 181 ACATACATTT TAATTCGATT CAACGGTATG CAAAGCAAAT TTATAAAAAT ATTGCAGCGA 241 AATAAGCAGC GATTTATACG ATTGTGCATT ACACAATCGC AGTGAATGAA GATAGCGAAT 301 TATACAATTG CAGCGAAATA GGCCATCAAA TTATACAATT TAGGCCAGCG AATTATACAA 361 TTGTATATGT ATAGCGAATT ATACAGTTTT ATGTTTGCTA TGGAGCGCAA TTATGCAAAC 421 TTTGTTATAA CATACAAATA TGAATTTTTT ATTTGCTATA CGTGAAAGTT GCCCTTAATT 481 AAATGCTCCA CAGTCTATAC GAATATTTCC ATTCTTACCC GTCTTCACAC CAACTCGGCC 541 CAATTTAGTC ATCGCATTAA CAAATGCGGT TTCAAAAACT TTAGAATTAC TGGCCCACAA 601 ATTAACAGTA CCTTTAGACC TTTGGTCTGT GAACAAAACT TGATCTGATG TGAATAGGCC 661 CATTCCGTTT TGCAAGTTTT Predicted gene structure (within gDNA segment 11353 to 6556): Exon 1 10369 10207 ( 163 n); cDNA 105 266 ( 162 n); score: 0.693 Intron 1 10206 10047 ( 160 n); Pd: 0.438 (s: 0.80), Pa: 0.000 (s: 0.68) Exon 2 10046 9797 ( 250 n); cDNA 267 505 ( 239 n); score: 0.760 MATCH C08HBa0235H18.1- SGN-E379427+ 0.734 413 0.607 C PGS_C08HBa0235H18.1-_SGN-E379427+ (10369 10207,10046 9797) Alignment (genomic DNA sequence = upper lines): TATAAGCGAG AGAAAACTGT ATATACACAT GCAAAAACAT ATATCTTCGT GTTATACAC- 10311 ||| ||| ||| | | ||||||||| |||| ||| | | |||||| TATTGTGTTT TTGTTTTTGT ATAAAGCGAG ACAAAAACAT ATATATTCTT GCCATACACT 164 T-TAATTATA CAATTTACAA ATATTTTACT TCAATTCAAT TGTAGACAAA TGCAAATTTT 10252 | ||||||| |||| |||| | |||||| | || |||||| ||| |||| ||||| ||| TATAATTATG CAATATACAT ACATTTTAAT TCGATTCAAC GGTATGCAAA -GCAAA-TTT 222 ATACAAATAT TGCAGCGAAA AAGGCGAACG AATTATACAA TTGCAGTGAA ATACAATTTT 10192 ||| |||||| |||||||||| | || | || | |||||| | ||| ATAAAAATAT TGCAGCGAAA TAAGC-AGCG ATTTATACGA TTGTG..... .......... 266 CTCTTGCTTT ATACAACAGA AGTGTATAAA TTGTGTTTAT GTTTTTGTAT AAAGCGAGAG 10132 .......... .......... .......... .......... .......... .......... 266 AAAAACATAT ATTTTTTTCC TATACACTTA TAATTATGCA ATATACATAC ATTTTACTTC 10072 .......... .......... .......... .......... .......... .......... 266 GATTCAATTG TATGCAAAAT AAATTTTATA CAAATATTGC AGAGAATTAT ACAATATGCA 10012 || || | || || || |||| | | | | | .......... .......... .....CATTA CACA-ATCGC AGTGAATGA- AGATAGCGAA 299 TTATACAATT GCAGTGAAAT ATGATAGCGA ATTATACAAT TGCGGCGAAA TAGGCCAGCA 9952 |||||||||| |||| ||||| | | | | | |||||||||| | ||||||||| TTATACAATT GCAGCGAAAT AGGCCATCAA ATTATACAAT T--------- TAGGCCAGCG 350 AATTATACAA TTGTATAT-T ATAGTGAATT ATACAGTTTT ATGTTTGCTA TGGAGCGTAA 9893 |||||||||| |||||||| | |||| ||||| |||||||||| |||||||||| ||||||| || AATTATACAA TTGTATATGT ATAGCGAATT ATACAGTTTT ATGTTTGCTA TGGAGCGCAA 410 TTATACAAAT TTTGCTATAA CACACAAATA TAAATTTTTT ATTTGCTATA TGCGAAAGTT 9833 |||| |||| |||| ||||| || ||||||| | |||||||| |||||||||| | ||||||| TTATGCAAAC TTTGTTATAA CATACAAATA TGAATTTTTT ATTTGCTATA CGTGAAAGTT 470 GTCC-TAAAA CAATTAACAA CATTACTCTT GAAAATA 9797 | || ||| ||| | | || | || | |||| GCCCTTAATT AAATGCTCCA CAGT-CT-AT ACGAATA 505 hqPGS_C08HBa0235H18.1-_SGN-E379427+ (10046 9797) ******************************************************************************** EST sequence 353 -strand 612 n (File: SGN-E394609-) 1 ATTATTACAC CCCTAATGAA ATGATTAAGG AACTTATTAA AGCAAAACAA CTAAATTCTT 61 ATTTTGCAAT CTTTTCTTGT CATTCACAAG CGATAATTCT AAATCTTTTT CCTTCTCTCC 121 ATTTTATACA AGCTCTTGGG AAAATTGTAT ATAATAGCAA ACTAGTAATC TAACTAAATG 181 GAGTAGCTAG AGTTTGATTT AATTGTGCTC CATAGCAAAC GTTAGCTAAA GTTTGTCAGG 241 CGTCTCCCTC CCAAAAATCT CGCTCGCCAC TCTCCATTCT CGCTCGCCTA TCTCGCTATA 301 TACACAGAAG TGTATAAATT CTGTTTCTAT TTTGTATAAA GCGAGAGAAA ATTGTATATA 361 CACATGTAAA AATATATATC TTCGTGTTAT ACACTTAATT ATACAAATTA CAAACATTTT 421 ACTTCAAATA TTGCAGAGAA AAAGGCCAAC GAATTATACA ATTGTGAATT ATATAATTGC 481 AGTGAAATAC AATTTTCTCT AACTTTATAC AACAGAAGTG TATATATTGT GTTTTTGTTT 541 TTGTATAAAG CGAGACAAAA ACATATATAT TCTTGCCATA CACTTATAAT TATGCAATAT 601 ACATACATTT TA Predicted gene structure (within gDNA segment 12997 to 9476): Exon 1 10420 10076 ( 345 n); cDNA 284 612 ( 329 n); score: 0.845 MATCH C08HBa0235H18.1- SGN-E394609- 0.845 345 0.564 C PGS_C08HBa0235H18.1-_SGN-E394609- (10420 10076) Alignment (genomic DNA sequence = upper lines): TCGCCTCTCT CTCTTTATAC ACAAAAGTGT ATAAATTGTG TTTCTGTTTT GTATAA-GCG 10362 |||||| ||| | || ||||| ||| |||||| ||||||| || ||||| |||| |||||| ||| TCGCCTATCT CGCTATATAC ACAGAAGTGT ATAAATTCTG TTTCTATTTT GTATAAAGCG 343 AGAGAAAACT GTATATACAC ATGCAAAAAC ATATATCTTC GTGTTATACA CTTAATTATA 10302 |||||||| | |||||||||| ||| ||||| |||||||||| |||||||||| |||||||||| AGAGAAAATT GTATATACAC ATGTAAAAAT ATATATCTTC GTGTTATACA CTTAATTATA 403 CAATTTACAA ATATTTTACT TCAATTCAAT TGTAGACAAA TGCAAATTTT ATACAAATAT 10242 ||| |||||| | |||||||| |||| | || || ||| || ||| | || | || CAAATTACAA ACATTTTACT TCAAAT--AT TGCAGA-GAA ---AAAGGCC A-AC-GA-AT 454 TGCAGCGAAA AAGGCGAACG AATTATACAA TTGCAGTGAA ATACAATTTT CTCTTGCTTT 10182 | | | || | | ||||||| || |||||||||| |||||||||| |||| |||| T--A---TAC AA-TTG--TG AATTATATAA TTGCAGTGAA ATACAATTTT CTCTAACTTT 506 ATACAACAGA AGTGTATAAA TTGTGTTTAT GTTTTTGTAT AAAGCGAGAG AAAAACATAT 10122 |||||||||| |||||||| | |||||||| | |||||||||| ||||||||| |||||||||| ATACAACAGA AGTGTATATA TTGTGTTTTT GTTTTTGTAT AAAGCGAGAC AAAAACATAT 566 ATTTTTTTCC TATACACTTA TAATTATGCA ATATACATAC ATTTTA 10076 || || || | ||||||||| |||||||||| |||||||||| |||||| ATATTCTTGC CATACACTTA TAATTATGCA ATATACATAC ATTTTA 612 hqPGS_C08HBa0235H18.1-_SGN-E394609- (10420 10076) ******************************************************************************** EST sequence 538 +strand 750 n (File: SGN-E379112+) 1 TGTGGGAATA TATATATATA TATATTCCGT TAATTAGACG AAATTGAGAA GCTGAAATCT 61 CACCTATAAC ATCAAGTATA CACGTTACCT ATGCCCTGGT TGTTTATAGC TGAATTTCAA 121 GCCCCTTTTC TTATTCTATT ATTACACCCC TAATGAAATG ATTAAGGAAC TTATTAAAGC 181 AAAACAACTA AATTCTTATT TTGCAATCTT TTCTTGTCAT TCACAAGCGA TAATTCTAAA 241 TCTTTTTCCT TCTCTCCATT TTATACAAGC TCTTGGGAAA ATTGTATATA ATAGCAAACT 301 AGTAATCTAA CTAAATGGAG TAGCTAGAGT TTGATTTAAT TGTGCTCCAT AGCAAACGTT 361 AGCTAAAGTT TGTCAGGCGT CTCCCTCCCA AAAATCTCGC TCGCCACTCT CCATTCTCGC 421 TCGCCTATCT CGCTATATAC ACAGAAGTGT ATAAATTCTG TTTCTATTTT GTATAAAGCG 481 AGAGAAAATT GTATATACAC ATGTAAAAAT ATATATCTTC GTGTTATACA CTTAATTATA 541 CAAATTACAA ACATTTTACT TCAAATATTG CAGAGAAAAA GGCCAACGAA TTATACAATT 601 GTGAATTATA TAATTGCAGT GAAATACAAT TTTCTCTAAC TTTATACAAC AGAAGTGTAT 661 ATATTGTGNT TTTTGTTTTT GTATAAAGCG AGACAAAAAC ATATATATTC TTGCCATACA 721 CTTATAATTA TGCAATATAC ATACATTTTA Predicted gene structure (within gDNA segment 14357 to 9466): Exon 1 10420 10076 ( 345 n); cDNA 421 750 ( 330 n); score: 0.838 MATCH C08HBa0235H18.1- SGN-E379112+ 0.838 345 0.460 C PGS_C08HBa0235H18.1-_SGN-E379112+ (10420 10076) Alignment (genomic DNA sequence = upper lines): TCGCCTCTCT CTCTTTATAC ACAAAAGTGT ATAAATTGTG TTTCTGTTTT GTATAA-GCG 10362 |||||| ||| | || ||||| ||| |||||| ||||||| || ||||| |||| |||||| ||| TCGCCTATCT CGCTATATAC ACAGAAGTGT ATAAATTCTG TTTCTATTTT GTATAAAGCG 480 AGAGAAAACT GTATATACAC ATGCAAAAAC ATATATCTTC GTGTTATACA CTTAATTATA 10302 |||||||| | |||||||||| ||| ||||| |||||||||| |||||||||| |||||||||| AGAGAAAATT GTATATACAC ATGTAAAAAT ATATATCTTC GTGTTATACA CTTAATTATA 540 CAATTTACAA ATATTTTACT TCAATTCAAT TGTAGACAAA TGCAAATTTT ATACAAATAT 10242 ||| |||||| | |||||||| |||| | || || ||| || ||| | || | || CAAATTACAA ACATTTTACT TCAAAT--AT TGCAGA-GAA ---AAAGGCC A-AC-GA-AT 591 TGCAGCGAAA AAGGCGAACG AATTATACAA TTGCAGTGAA ATACAATTTT CTCTTGCTTT 10182 | | | || | | ||||||| || |||||||||| |||||||||| |||| |||| T--A---TAC AA-TTG--TG AATTATATAA TTGCAGTGAA ATACAATTTT CTCTAACTTT 643 ATACAACAGA AGTGTATAAA TTGTG-TTTA TGTTTTTGTA TAAAGCGAGA GAAAAACATA 10123 |||||||||| |||||||| | ||||| ||| |||||||||| |||||||||| ||||||||| ATACAACAGA AGTGTATATA TTGTGNTTTT TGTTTTTGTA TAAAGCGAGA CAAAAACATA 703 TATTTTTTTC CTATACACTT ATAATTATGC AATATACATA CATTTTA 10076 ||| || || | |||||||| |||||||||| |||||||||| ||||||| TATATTCTTG CCATACACTT ATAATTATGC AATATACATA CATTTTA 750 hqPGS_C08HBa0235H18.1-_SGN-E379112+ (10420 10076) ******************************************************************************** EST sequence 289 -strand 530 n (File: SGN-E393065-) 1 TTCACAAGCG ATAATTCTAA ATCTTTTTCC TTCTCTCCAT TTTATACAAG CTATGGGACA 61 AATTGTATAT AATAGCAAAC TAGTAATCTA ACTAAATGGA GTAGATAGAG TTAGATCTTA 121 TTGTGCTTCA TGGCAAACGT TAGCTAAAGT TGGTCAGGCG TCTGCCTCCC AAAAATCTCG 181 CTGGCCATTT TCCATTATCG CTGGCATATC TCGTTATATA CACAGAAGTG TATAGATTAT 241 GTTTATATTT TGTATAAAGC GAGAGAAAAT TGTATATACA CATGTGAAAA TATATATCTT 301 CGTGTTATAC ACTTAATTAT ACAAATTACA AACATTTTAC TTCAAATATG GCAGTGAAAA 361 AGGCCAAGGA ATTATGCAAT TGTGAATTAT ATAATTGCAG TGAAATACAA TTTTGTCTAA 421 CTTTATACAA CAGAAGTGTA TATATTGTGT TTTTGTTTTA GTATAAAGCG AGACAAAAAC 481 ATATATATTC TTGCCATGCG CTTATAATTA TGCAATATAC ATACATTTTA Predicted gene structure (within gDNA segment 13851 to 9476): Exon 1 10418 10076 ( 343 n); cDNA 204 530 ( 327 n); score: 0.809 MATCH C08HBa0235H18.1- SGN-E393065- 0.809 343 0.647 C PGS_C08HBa0235H18.1-_SGN-E393065- (10418 10076) Alignment (genomic DNA sequence = upper lines): GCCTCTCTCT CTTTATACAC AAAAGTGTAT AAATTGTGTT TCTGTTTTGT AT-AAGCGAG 10360 || | |||| | ||||||| | |||||||| | ||| |||| | | |||||| || ||||||| GCATATCTCG TTATATACAC AGAAGTGTAT AGATTATGTT TATATTTTGT ATAAAGCGAG 263 AGAAAACTGT ATATACACAT GCAAAAACAT ATATCTTCGT GTTATACACT TAATTATACA 10300 |||||| ||| |||||||||| | |||| || |||||||||| |||||||||| |||||||||| AGAAAATTGT ATATACACAT GTGAAAATAT ATATCTTCGT GTTATACACT TAATTATACA 323 ATTTACAAAT ATTTTACTTC AATTCAATTG TAGACAAATG CAAATTTTAT ACAAATATTG 10240 | ||||||| |||||||||| || | | || | | | || ||| ||| | | AATTACAAAC ATTTTACTTC AAAT--A-TG --G-C-AGTG -AAA--AAGG CCAAGGAAT- 372 CAGCGAAAAA GGCGAACGAA TTATACAATT GCAGTGAAAT ACAATTTTCT CTTGCTTTAT 10180 | | || | ||| ||||| |||| |||||||||| |||||||| | || |||||| TA-TG--CAA -TTG--TGAA TTATATAATT GCAGTGAAAT ACAATTTTGT CTAACTTTAT 426 ACAACAGAAG TGTATAAATT GTGTTTATGT TTTTGTATAA AGCGAGAGAA AAACATATAT 10120 |||||||||| |||||| ||| |||||| ||| ||| |||||| ||||||| || |||||||||| ACAACAGAAG TGTATATATT GTGTTTTTGT TTTAGTATAA AGCGAGACAA AAACATATAT 486 TTTTTTCCTA TACACTTATA ATTATGCAAT ATACATACAT TTTA 10076 || || | | | | |||||| |||||||||| |||||||||| |||| ATTCTTGCCA TGCGCTTATA ATTATGCAAT ATACATACAT TTTA 530 hqPGS_C08HBa0235H18.1-_SGN-E393065- (10418 10076) ******************************************************************************** EST sequence 292 -strand 325 n (File: SGN-E393076-) 1 CTATCTCGCT ATATACACAA AAAAAAATAA ATTCTGTTTT TATTTTGTAT AAAGCGAGAG 61 AAAATTGTAT ATACACATGT AAAAATATAT ATCTTCGTGT TATACACTTA ATTATACAAA 121 TTACAAACAT TTTACTTCAA ATATTGCAGA GAAAAAGGCC AACGAATTAT ACAATTGTGA 181 ATTATATAAT TGCAGTGAAA TACAATTTTC TCTAACTTTA TACAACAGAA GTGTATATAT 241 TGTGTTTTTG TTTTTGTATA AAGCGAGACA AAAACATATA TATTCTTGCC ATACACTTAT 301 AATTATGCAA TATACATACA TTTTA Predicted gene structure (within gDNA segment 11801 to 9476): Exon 1 10416 10076 ( 341 n); cDNA 1 325 ( 325 n); score: 0.831 MATCH C08HBa0235H18.1- SGN-E393076- 0.831 341 1.049 C PGS_C08HBa0235H18.1-_SGN-E393076- (10416 10076) Alignment (genomic DNA sequence = upper lines): CTCTCTCTCT TTATACACAA AAGTGTATAA ATTGTGTTTC TGTTTTGTAT -AAGCGAGAG 10358 || |||| || ||||||||| || |||| ||| ||||| | |||||||| ||||||||| CTATCTCGCT ATATACACAA AAAAAAATAA ATTCTGTTTT TATTTTGTAT AAAGCGAGAG 60 AAAACTGTAT ATACACATGC AAAAACATAT ATCTTCGTGT TATACACTTA ATTATACAAT 10298 |||| ||||| ||||||||| ||||| |||| |||||||||| |||||||||| ||||||||| AAAATTGTAT ATACACATGT AAAAATATAT ATCTTCGTGT TATACACTTA ATTATACAAA 120 TTACAAATAT TTTACTTCAA TTCAATTGTA GACAAATGCA AATTTTATAC AAATATTGCA 10238 ||||||| || |||||||||| | |||| | || ||| || | || | ||| | TTACAAACAT TTTACTTCAA AT--ATTGCA GAGAAA---- AAGGCCA-AC -GA-ATT--A 169 GCGAAAAAGG CGAACGAATT ATACAATTGC AGTGAAATAC AATTTTCTCT TGCTTTATAC 10178 | || | ||||| ||| |||||| |||||||||| |||||||||| |||||||| ---TACAA-T TG--TGAATT ATATAATTGC AGTGAAATAC AATTTTCTCT AACTTTATAC 223 AACAGAAGTG TATAAATTGT GTTTATGTTT TTGTATAAAG CGAGAGAAAA ACATATATTT 10118 |||||||||| |||| ||||| |||| ||||| |||||||||| ||||| |||| |||||||| | AACAGAAGTG TATATATTGT GTTTTTGTTT TTGTATAAAG CGAGACAAAA ACATATATAT 283 TTTTCCTATA CACTTATAAT TATGCAATAT ACATACATTT TA 10076 | || | ||| |||||||||| |||||||||| |||||||||| || TCTTGCCATA CACTTATAAT TATGCAATAT ACATACATTT TA 325 hqPGS_C08HBa0235H18.1-_SGN-E393076- (10416 10076) ******************************************************************************** EST sequence 291 -strand 308 n (File: SGN-E393075-) 1 AAAAAAAAAA AAACCTCTGT TTCTATTTTG TATAAAGCGA GAGAAAATTG TATATACACA 61 TGTAAAAATA TATATCTTCG TGTTATACAC TTAATTATAC AAATTACAAA CATTTTACTT 121 CAAATATTGC AGAGAAAAAG GCCAACGAAT TATACAATTG TGAATTATAT AATTGCAGTG 181 AAATACAATT TTCTCTAACT TTATACAACA GAAGTGTATA TATTGTGTTT TTGTTTTTGT 241 ATAAAGCGAG ACAAAAACAT ATATATTCTT GCCATACACT TATAATTATG CAATATACAT 301 ACATTTTA Predicted gene structure (within gDNA segment 11631 to 9476): Exon 1 10398 10076 ( 323 n); cDNA 2 308 ( 307 n); score: 0.825 MATCH C08HBa0235H18.1- SGN-E393075- 0.825 323 1.049 C PGS_C08HBa0235H18.1-_SGN-E393075- (10398 10076) Alignment (genomic DNA sequence = upper lines): AAAAGTGTAT AAATTGTGTT TCTGTTTTGT ATAA-GCGAG AGAAAACTGT ATATACACAT 10340 |||| | || | |||| ||| |||||| |||| ||||| |||||| ||| |||||||||| AAAAAAAAAA AACCTCTGTT TCTATTTTGT ATAAAGCGAG AGAAAATTGT ATATACACAT 61 GCAAAAACAT ATATCTTCGT GTTATACACT TAATTATACA ATTTACAAAT ATTTTACTTC 10280 | ||||| || |||||||||| |||||||||| |||||||||| | ||||||| |||||||||| GTAAAAATAT ATATCTTCGT GTTATACACT TAATTATACA AATTACAAAC ATTTTACTTC 121 AATTCAATTG TAGACAAATG CAAATTTTAT ACAAATATTG CAGCGAAAAA GGCGAACGAA 10220 || | |||| ||| || ||| | || | ||| | | || | ||| AAAT--ATTG CAGA-GAA-- -AAAGGCCA- AC-GA-ATTA TA-C--AATT G-----TGAA 164 TTATACAATT GCAGTGAAAT ACAATTTTCT CTTGCTTTAT ACAACAGAAG TGTATAAATT 10160 ||||| |||| |||||||||| |||||||||| || |||||| |||||||||| |||||| ||| TTATATAATT GCAGTGAAAT ACAATTTTCT CTAACTTTAT ACAACAGAAG TGTATATATT 224 GTGTTTATGT TTTTGTATAA AGCGAGAGAA AAACATATAT TTTTTTCCTA TACACTTATA 10100 |||||| ||| |||||||||| ||||||| || |||||||||| || || | | |||||||||| GTGTTTTTGT TTTTGTATAA AGCGAGACAA AAACATATAT ATTCTTGCCA TACACTTATA 284 ATTATGCAAT ATACATACAT TTTA 10076 |||||||||| |||||||||| |||| ATTATGCAAT ATACATACAT TTTA 308 hqPGS_C08HBa0235H18.1-_SGN-E393075- (10398 10076) ******************************************************************************** EST sequence 293 -strand 153 n (File: SGN-E392727-) 1 AATTGTGAAT TATATAATTG CAGTGAAATA CAATTTTCTC TAACTTTATA CAACAGAAGT 61 GTATATATTG TGTTTTAAAT TTTGTATAAA GCGTGACAAA AACATATATA TTCTTGCCAT 121 ACACTTATAA TTATGCAATA TACATACATA TTA Predicted gene structure (within gDNA segment 10973 to 9440): Exon 1 10222 10076 ( 147 n); cDNA 7 153 ( 147 n); score: 0.898 MATCH C08HBa0235H18.1- SGN-E392727- 0.898 147 0.961 C PGS_C08HBa0235H18.1-_SGN-E392727- (10222 10076) Alignment (genomic DNA sequence = upper lines): GAATTATACA ATTGCAGTGA AATACAATTT TCTCTTGCTT TATACAACAG AAGTGTATAA 10163 |||||||| | |||||||||| |||||||||| ||||| ||| |||||||||| ||||||||| GAATTATATA ATTGCAGTGA AATACAATTT TCTCTAACTT TATACAACAG AAGTGTATAT 66 ATTGTGTTTA TGTTTTTGTA TAAAGCGAGA GAAAAACATA TATTTTTTTC CTATACACTT 10103 ||||||||| ||||||| ||||||| || ||||||||| ||| || || | |||||||| ATTGTGTTTT AAATTTTGTA TAAAGCGTGA CAAAAACATA TATATTCTTG CCATACACTT 126 ATAATTATGC AATATACATA CATTTTA 10076 |||||||||| |||||||||| ||| ||| ATAATTATGC AATATACATA CATATTA 153 hqPGS_C08HBa0235H18.1-_SGN-E392727- (10222 10076) ******************************************************************************** EST sequence 56 -strand 570 n (File: SGN-E379618-) 1 GCAAAACAAC TAAATTCTTA TTTTGCAATC TTTTCTTGTC ATTCACAAGC GATAATTCTA 61 AATCTTTTTC CTTCTCTCCA TNTTATACAA GCTCTTGGGA AAATTGTATA TAATAGCAAA 121 CTAGTAATCT AACTAAATGG AGTAGCTAGA GTTTGATTTA ATTGTGCTCC ATAGCAAACG 181 TTAGCTAAAG TTTGTCAGGC GTCTCCCTCC CAAAAATCTC GCTCGCCACT CTCCATTCTC 241 GCTCGCCTAT CTCGCTATAT ACACAGAAGT GTATAAATTC TGTTTCTATT TTGTATAAAG 301 CGAGAGAAAA TTGTATATAC ACATGTAAAA ATATATATCT TCGTGTTATA CACTTAATTA 361 TACAAATTAC AAACATTTTA CTTCAAATAT TGCAGAGAAA AAGGCCAACG AATTATACAA 421 TTGTGAATTA TATAATTGCA GTGAAATACA ATTTTCTCTA ACTTTATACA ACAGAAGTGT 481 ATATATTGTG TTTTTGTTTT TGTATAAAGC GAGACAAAAA CATATATATT CTTGCCATAC 541 ACTTATAATT ATGCAATATA CATACATTTT Predicted gene structure (within gDNA segment 12587 to 9477): Exon 1 10420 10077 ( 344 n); cDNA 243 570 ( 328 n); score: 0.844 MATCH C08HBa0235H18.1- SGN-E379618- 0.844 344 0.604 C PGS_C08HBa0235H18.1-_SGN-E379618- (10420 10077) Alignment (genomic DNA sequence = upper lines): TCGCCTCTCT CTCTTTATAC ACAAAAGTGT ATAAATTGTG TTTCTGTTTT GTATAA-GCG 10362 |||||| ||| | || ||||| ||| |||||| ||||||| || ||||| |||| |||||| ||| TCGCCTATCT CGCTATATAC ACAGAAGTGT ATAAATTCTG TTTCTATTTT GTATAAAGCG 302 AGAGAAAACT GTATATACAC ATGCAAAAAC ATATATCTTC GTGTTATACA CTTAATTATA 10302 |||||||| | |||||||||| ||| ||||| |||||||||| |||||||||| |||||||||| AGAGAAAATT GTATATACAC ATGTAAAAAT ATATATCTTC GTGTTATACA CTTAATTATA 362 CAATTTACAA ATATTTTACT TCAATTCAAT TGTAGACAAA TGCAAATTTT ATACAAATAT 10242 ||| |||||| | |||||||| |||| | || || ||| || ||| | || | || CAAATTACAA ACATTTTACT TCAAAT--AT TGCAGA-GAA ---AAAGGCC A-AC-GA-AT 413 TGCAGCGAAA AAGGCGAACG AATTATACAA TTGCAGTGAA ATACAATTTT CTCTTGCTTT 10182 | | | || | | ||||||| || |||||||||| |||||||||| |||| |||| T--A---TAC AA-TTG--TG AATTATATAA TTGCAGTGAA ATACAATTTT CTCTAACTTT 465 ATACAACAGA AGTGTATAAA TTGTGTTTAT GTTTTTGTAT AAAGCGAGAG AAAAACATAT 10122 |||||||||| |||||||| | |||||||| | |||||||||| ||||||||| |||||||||| ATACAACAGA AGTGTATATA TTGTGTTTTT GTTTTTGTAT AAAGCGAGAC AAAAACATAT 525 ATTTTTTTCC TATACACTTA TAATTATGCA ATATACATAC ATTTT 10077 || || || | ||||||||| |||||||||| |||||||||| ||||| ATATTCTTGC CATACACTTA TAATTATGCA ATATACATAC ATTTT 570 hqPGS_C08HBa0235H18.1-_SGN-E379618- (10420 10077) ******************************************************************************** EST sequence 443 -strand 450 n (File: SGN-E200845-) 1 CTAGTAATCT AACTAAATGG AGTAGCTAGA GTTTGATTTA ATTGTGCTCC ATAGCAAACG 61 TTAGCTAAAG TTTGTCAGGC GTCTCCCTCC CAAAAATCTC GCTCGCCACT CTCCATTCTC 121 GCTCGCCTAT CTCGCTATAT ACACAGAAGT GTATAAATTC TGTTTCTATT TTGTATAAAG 181 CGAGAGAAAA TTGTATATAC ACATGTAAAA ATATATATCT TCGTGTTATA CACTTAATTA 241 TACAAATTAC AAACATTTTA CTTCAAATAT TGCAGAGAAA AAGGCCAACG AATTATACAA 301 TTGTGAATTA TATAATTGCA GTGAAATACA ATTTTCTCTA ACTTTATACA ACAGAAGTGT 361 ATATATTGTG TTTTTGTTTT TGTATAAAGC GAGACAAAAA CATATATATT CTTGCCATAC 421 ACTTATAATT ATGCAATATA CATACATTTT Predicted gene structure (within gDNA segment 11387 to 9477): Exon 1 10420 10077 ( 344 n); cDNA 123 450 ( 328 n); score: 0.844 MATCH C08HBa0235H18.1- SGN-E200845- 0.844 344 0.764 C PGS_C08HBa0235H18.1-_SGN-E200845- (10420 10077) Alignment (genomic DNA sequence = upper lines): TCGCCTCTCT CTCTTTATAC ACAAAAGTGT ATAAATTGTG TTTCTGTTTT GTATA-AGCG 10362 |||||| ||| | || ||||| ||| |||||| ||||||| || ||||| |||| ||||| |||| TCGCCTATCT CGCTATATAC ACAGAAGTGT ATAAATTCTG TTTCTATTTT GTATAAAGCG 182 AGAGAAAACT GTATATACAC ATGCAAAAAC ATATATCTTC GTGTTATACA CTTAATTATA 10302 |||||||| | |||||||||| ||| ||||| |||||||||| |||||||||| |||||||||| AGAGAAAATT GTATATACAC ATGTAAAAAT ATATATCTTC GTGTTATACA CTTAATTATA 242 CAATTTACAA ATATTTTACT TCAATTCAAT TGTAGACAAA TGCAAATTTT ATACAAATAT 10242 ||| |||||| | |||||||| |||| | || || ||| || ||| | || | || CAAATTACAA ACATTTTACT TCAAAT--AT TGCAGA-GAA ---AAAGGCC A-AC-GA-AT 293 TGCAGCGAAA AAGGCGAACG AATTATACAA TTGCAGTGAA ATACAATTTT CTCTTGCTTT 10182 | | | || | | ||||||| || |||||||||| |||||||||| |||| |||| T--A---TAC AA-TTG--TG AATTATATAA TTGCAGTGAA ATACAATTTT CTCTAACTTT 345 ATACAACAGA AGTGTATAAA TTGTGTTTAT GTTTTTGTAT AAAGCGAGAG AAAAACATAT 10122 |||||||||| |||||||| | |||||||| | |||||||||| ||||||||| |||||||||| ATACAACAGA AGTGTATATA TTGTGTTTTT GTTTTTGTAT AAAGCGAGAC AAAAACATAT 405 ATTTTTTTCC TATACACTTA TAATTATGCA ATATACATAC ATTTT 10077 || || || | ||||||||| |||||||||| |||||||||| ||||| ATATTCTTGC CATACACTTA TAATTATGCA ATATACATAC ATTTT 450 hqPGS_C08HBa0235H18.1-_SGN-E200845- (10420 10077) ******************************************************************************** EST sequence 1226 +strand 498 n (File: SGN-E349779+) 1 TCCAATGACT TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA TTCATTGTAC 61 GGCTAATATA AATGGTGAAT GTCCTGGTTC ACTTAGGGTA CCCGGAGGAT GTAACAATCC 121 TTGTACCACG TTCGGAGGAC AACAATATTG TTGCACACAA GGTCCATGTG GCCCTACTGA 181 TTTGTCGAGA TTTTTCAAAC AAAGATGTCC TGATGCGTAT AGCTACCCAC AAGATGATCC 241 TACTAGCACA TTTACTTGCC CTAGTGGTAG TACAAATTAT AGGGTTGTTT TTTGTCCTAA 301 TGGTGTTACT AGCCCAAATT TCCCCTTGGA GATGCCCTCA AGTGATGAAG AGGCTAAGTA 361 AAATTGAGTC ACTTTCTTTT AAATTGCTTG AAGTAGTCGA GTTATATAAT TGGCTTGTAA 421 TAAACCTAAT ATAATTACAT GAATAAAAGT CACATCATCA CAAATATGTT GTTTCGAAAA 481 ANAAAAAAAA AAAAAAAA Predicted gene structure (within gDNA segment 12334 to 10447): Exon 1 11734 11258 ( 477 n); cDNA 1 477 ( 477 n); score: 1.000 Intron 1 11257 11092 ( 166 n); Pd: 0.000 (s: 1.00), Pa: 0.000 (s: 0) Exon 2 11091 11071 ( 21 n); cDNA 478 498 ( 21 n); score: 0.810 MATCH C08HBa0235H18.1- SGN-E349779+ 1.000 498 1.000 C PGS_C08HBa0235H18.1-_SGN-E349779+ (11734 11258,11091 11071) Alignment (genomic DNA sequence = upper lines): TCCAATGACT TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA TTCATTGTAC 11675 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCAATGACT TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA TTCATTGTAC 60 GGCTAATATA AATGGTGAAT GTCCTGGTTC ACTTAGGGTA CCCGGAGGAT GTAACAATCC 11615 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCTAATATA AATGGTGAAT GTCCTGGTTC ACTTAGGGTA CCCGGAGGAT GTAACAATCC 120 TTGTACCACG TTCGGAGGAC AACAATATTG TTGCACACAA GGTCCATGTG GCCCTACTGA 11555 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTACCACG TTCGGAGGAC AACAATATTG TTGCACACAA GGTCCATGTG GCCCTACTGA 180 TTTGTCGAGA TTTTTCAAAC AAAGATGTCC TGATGCGTAT AGCTACCCAC AAGATGATCC 11495 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGTCGAGA TTTTTCAAAC AAAGATGTCC TGATGCGTAT AGCTACCCAC AAGATGATCC 240 TACTAGCACA TTTACTTGCC CTAGTGGTAG TACAAATTAT AGGGTTGTTT TTTGTCCTAA 11435 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACTAGCACA TTTACTTGCC CTAGTGGTAG TACAAATTAT AGGGTTGTTT TTTGTCCTAA 300 TGGTGTTACT AGCCCAAATT TCCCCTTGGA GATGCCCTCA AGTGATGAAG AGGCTAAGTA 11375 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTGTTACT AGCCCAAATT TCCCCTTGGA GATGCCCTCA AGTGATGAAG AGGCTAAGTA 360 AAATTGAGTC ACTTTCTTTT AAATTGCTTG AAGTAGTCGA GTTATATAAT TGGCTTGTAA 11315 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATTGAGTC ACTTTCTTTT AAATTGCTTG AAGTAGTCGA GTTATATAAT TGGCTTGTAA 420 TAAACCTAAT ATAATTACAT GAATAAAAGT CACATCATCA CAAATATGTT GTTTCGAATA 11255 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| TAAACCTAAT ATAATTACAT GAATAAAAGT CACATCATCA CAAATATGTT GTTTCGA... 477 TTATTTTATG TATATTTTGT TATTTACGTA TTAACTTGTC AAATAAAAGA ATAATATCAG 11195 .......... .......... .......... .......... .......... .......... 477 TCAGTTTAAA AACATAAAAA CTATAATATA CTGGATAAGA TAAATAAGAA CATCTCACGA 11135 .......... .......... .......... .......... .......... .......... 477 GATTATTTTA TCTCATTTTT TTATATGATA AAAGTTCCAT CACAAAATAT AAAAATAAAA 11075 |||| | ||||| |||| .......... .......... .......... .......... ...AAAANAA AAAAAAAAAA 494 TAAA 11071 ||| AAAA 498 hqPGS_C08HBa0235H18.1-_SGN-E349779+ (11734 11258,11091 11071) ******************************************************************************** EST sequence 876 +strand 487 n (File: SGN-E299150+) 1 TGGAGGGAAA TGCCATGCAA TTCATTGTTC GGCTAATATA AATGGTGAAT GTCCTGGTTC 61 ACTTAGGGTA CCCGGAGGAT GTAACAATCC TTGTACCACG TTCGGAGGAC AACAATATTG 121 TTGCACACAA GGTCCATGTG GCCCTACTGA TTTGTCGAGA TTTTTCAAAC AAAGATGTCC 181 TGATGCGTAT AGCTACCCAC AAGATGATCC TACTAGCACA TTTACTTGCC CTAGTGGTAG 241 TACAAATTAT AGGGTTGTTT TTTGTCCTAA TGGTGTTACT AGCCCAAATT TCCCCTTGGA 301 GATGCCCTCA AGTGATGAAG AGGCTAAGTA AAATTGAGTC ACTTTCTTTT AAATTGCTTG 361 AAGTAGTCGA GTTATATAAT TGGCTTGTAA TAAACCTAAT ATAATTACAT GAATAAAAGT 421 CTCATCATCA CAAATATGTT GTTTCGAATA TTATTTTATG TATATTTTGA TATTTACGTA 481 TTAACTT Predicted gene structure (within gDNA segment 12304 to 10608): Exon 1 11704 11218 ( 487 n); cDNA 1 487 ( 487 n); score: 0.994 MATCH C08HBa0235H18.1- SGN-E299150+ 0.994 487 1.000 C PGS_C08HBa0235H18.1-_SGN-E299150+ (11704 11218) Alignment (genomic DNA sequence = upper lines): TGGAGGGAAA TGCCATGCAA TTCATTGTAC GGCTAATATA AATGGTGAAT GTCCTGGTTC 11645 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| TGGAGGGAAA TGCCATGCAA TTCATTGTTC GGCTAATATA AATGGTGAAT GTCCTGGTTC 60 ACTTAGGGTA CCCGGAGGAT GTAACAATCC TTGTACCACG TTCGGAGGAC AACAATATTG 11585 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTAGGGTA CCCGGAGGAT GTAACAATCC TTGTACCACG TTCGGAGGAC AACAATATTG 120 TTGCACACAA GGTCCATGTG GCCCTACTGA TTTGTCGAGA TTTTTCAAAC AAAGATGTCC 11525 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCACACAA GGTCCATGTG GCCCTACTGA TTTGTCGAGA TTTTTCAAAC AAAGATGTCC 180 TGATGCGTAT AGCTACCCAC AAGATGATCC TACTAGCACA TTTACTTGCC CTAGTGGTAG 11465 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATGCGTAT AGCTACCCAC AAGATGATCC TACTAGCACA TTTACTTGCC CTAGTGGTAG 240 TACAAATTAT AGGGTTGTTT TTTGTCCTAA TGGTGTTACT AGCCCAAATT TCCCCTTGGA 11405 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACAAATTAT AGGGTTGTTT TTTGTCCTAA TGGTGTTACT AGCCCAAATT TCCCCTTGGA 300 GATGCCCTCA AGTGATGAAG AGGCTAAGTA AAATTGAGTC ACTTTCTTTT AAATTGCTTG 11345 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGCCCTCA AGTGATGAAG AGGCTAAGTA AAATTGAGTC ACTTTCTTTT AAATTGCTTG 360 AAGTAGTCGA GTTATATAAT TGGCTTGTAA TAAACCTAAT ATAATTACAT GAATAAAAGT 11285 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTAGTCGA GTTATATAAT TGGCTTGTAA TAAACCTAAT ATAATTACAT GAATAAAAGT 420 CACATCATCA CAAATATGTT GTTTCGAATA TTATTTTATG TATATTTTGT TATTTACGTA 11225 | |||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| CTCATCATCA CAAATATGTT GTTTCGAATA TTATTTTATG TATATTTTGA TATTTACGTA 480 TTAACTT 11218 ||||||| TTAACTT 487 hqPGS_C08HBa0235H18.1-_SGN-E299150+ (11704 11218) ******************************************************************************** EST sequence 1042 +strand 741 n (File: SGN-E355282+) 1 GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG GGGCACTAAG 61 ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG AGGTTCATGT 121 CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC ACCAAACACC 181 CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT TTCTTTAGTC 241 GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG GAAATGCCAT 301 GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG GGTACCCGGA 361 GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT ATTGTTGCAC ACAAGGTCCA 421 TGTGGCCCTA CTGATTTGTC GAGATTTTTC AAACAAAGAT GTCCTGATGC GTATAGCTAC 481 CCACAAGATG ATCCTACTAG CACATTTACT TGCCCTAGTG GTAGTACAAA TTATAGGGTT 541 GTTTTTTGTC CTAATGGTGT TACTAGCCCA AATTTCCCCT TGGAGATGCC CTCAAGTGAT 601 GAAGAGGCTA AGTAAAATTG AGTCACTTTC TTTTAAATTG CTTGAAGTAG TCGAGTTATA 661 TAATTGGCTT GTAATAAACC TAATATAATT ACATGAATAA AAGTCACATC ATCACAAATA 721 TGTTGTTTTC GANNAAAAAA A Predicted gene structure (within gDNA segment 12588 to 10521): Exon 1 11988 11258 ( 731 n); cDNA 1 732 ( 732 n); score: 0.997 MATCH C08HBa0235H18.1- SGN-E355282+ 0.997 731 0.987 C PGS_C08HBa0235H18.1-_SGN-E355282+ (11988 11258) Alignment (genomic DNA sequence = upper lines): GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG GGGCACTAAG 11929 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG GGGCACTAAG 60 ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG AGGTTCATGT 11869 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG AGGTTCATGT 120 CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC ACCAAACACC 11809 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC ACCAAACACC 180 CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT TTCTTTAGTC 11749 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT TTCTTTAGTC 240 GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG GAAATGCCAT 11689 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG GAAATGCCAT 300 GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG GGTACCCGGA 11629 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG GGTACCCGGA 360 GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT ATTGTTGCAC ACAAGGTCCA 11569 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT ATTGTTGCAC ACAAGGTCCA 420 TGTGGCCCTA CTGATTTGTC GAGATTTTTC AAACAAAGAT GTCCTGATGC GTATAGCTAC 11509 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGGCCCTA CTGATTTGTC GAGATTTTTC AAACAAAGAT GTCCTGATGC GTATAGCTAC 480 CCACAAGATG ATCCTACTAG CACATTTACT TGCCCTAGTG GTAGTACAAA TTATAGGGTT 11449 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCACAAGATG ATCCTACTAG CACATTTACT TGCCCTAGTG GTAGTACAAA TTATAGGGTT 540 GTTTTTTGTC CTAATGGTGT TACTAGCCCA AATTTCCCCT TGGAGATGCC CTCAAGTGAT 11389 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTTTTGTC CTAATGGTGT TACTAGCCCA AATTTCCCCT TGGAGATGCC CTCAAGTGAT 600 GAAGAGGCTA AGTAAAATTG AGTCACTTTC TTTTAAATTG CTTGAAGTAG TCGAGTTATA 11329 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGAGGCTA AGTAAAATTG AGTCACTTTC TTTTAAATTG CTTGAAGTAG TCGAGTTATA 660 TAATTGGCTT GTAATAAACC TAATATAATT ACATGAATAA AAGTCACATC ATCACAAATA 11269 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATTGGCTT GTAATAAACC TAATATAATT ACATGAATAA AAGTCACATC ATCACAAATA 720 TGTTG-TTTC GA 11258 ||||| |||| || TGTTGTTTTC GA 732 hqPGS_C08HBa0235H18.1-_SGN-E355282+ (11988 11258) ******************************************************************************** EST sequence 169 -strand 803 n (File: SGN-E540205-) 1 ACTTACACTT ATGCTGCCAC TTTCGAGGTA CGCAACAACT GTCCATACAC CGTCTGGGCG 61 GCGTCGACCN CAATAGGCGG TGGTCGACGT CTTGATCGAG GCCAAACATG GGTCATCAAT 121 GCACCGAGGG GCACTAAGAT GGCACGTATA TGGGGTCGTA CGAATTGCAA CTTTGATGGT 181 GCTGGTAGAG GTTCATGTCA GACTGGTGAT TGTGGTGGGG TCTTGCAATG TACCGGGTGG 241 GGCAAACCAC CAAACACCCT GGCCGAGTAC GCCTTGGACC AGTTTAGCAA CCTAGATTTC 301 TGGGACATTT CTTTAGTCGA TGGATTTAAT ATTCCAATGA CTTTCGCCCC GACCAATCCT 361 AGTGGAGGGA AATGCCATGC AATTCATTGT ACGGCTAATA TAAATGGTGA ATGTCCTGGT 421 TCACTTAGGG TACCCGGAGG ATGTAACAAT CCTTGTACCA CGTTCGGAGG ACAACAATAT 481 TGTTGCACAC AAGGTCCATG TGGCCCTACT GATTTGTCGA GATTTTTCAA ACAAAGATGT 541 CCTGATGCGT ATAGCTACCC ACAAGATGAT CCTACTAGCA CATTTACTTG CCCTAGTGGT 601 AGTACAAATT ATAGGGTTGT TTTTTGTCCT AATGGTGTTA CTAGCCCAAA TTTCCCCTTG 661 GAGATGCCCT CAAGTGATGA AGAGGCTAAG TAAAATTGAG TCACTTTCTT TTAAATTGCT 721 TGAAGTAGTC GAGTTATATA ATTGGCTTGT AATAAACCTA ATATAATTAC ATGAATAAAA 781 GTCACATCAT CACAAAAAAA AAA Predicted gene structure (within gDNA segment 12676 to 10601): Exon 1 12066 11271 ( 796 n); cDNA 1 796 ( 796 n); score: 0.999 MATCH C08HBa0235H18.1- SGN-E540205- 0.999 796 0.991 C PGS_C08HBa0235H18.1-_SGN-E540205- (12066 11271) Alignment (genomic DNA sequence = upper lines): ACTTACACTT ATGCTGCCAC TTTCGAGGTA CGCAACAACT GTCCATACAC CGTCTGGGCG 12007 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTACACTT ATGCTGCCAC TTTCGAGGTA CGCAACAACT GTCCATACAC CGTCTGGGCG 60 GCGTCGACCC CAATAGGCGG TGGTCGACGT CTTGATCGAG GCCAAACATG GGTCATCAAT 11947 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGTCGACCN CAATAGGCGG TGGTCGACGT CTTGATCGAG GCCAAACATG GGTCATCAAT 120 GCACCGAGGG GCACTAAGAT GGCACGTATA TGGGGTCGTA CGAATTGCAA CTTTGATGGT 11887 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCACCGAGGG GCACTAAGAT GGCACGTATA TGGGGTCGTA CGAATTGCAA CTTTGATGGT 180 GCTGGTAGAG GTTCATGTCA GACTGGTGAT TGTGGTGGGG TCTTGCAATG TACCGGGTGG 11827 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTGGTAGAG GTTCATGTCA GACTGGTGAT TGTGGTGGGG TCTTGCAATG TACCGGGTGG 240 GGCAAACCAC CAAACACCCT GGCCGAGTAC GCCTTGGACC AGTTTAGCAA CCTAGATTTC 11767 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCAAACCAC CAAACACCCT GGCCGAGTAC GCCTTGGACC AGTTTAGCAA CCTAGATTTC 300 TGGGACATTT CTTTAGTCGA TGGATTTAAT ATTCCAATGA CTTTCGCCCC GACCAATCCT 11707 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGGACATTT CTTTAGTCGA TGGATTTAAT ATTCCAATGA CTTTCGCCCC GACCAATCCT 360 AGTGGAGGGA AATGCCATGC AATTCATTGT ACGGCTAATA TAAATGGTGA ATGTCCTGGT 11647 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTGGAGGGA AATGCCATGC AATTCATTGT ACGGCTAATA TAAATGGTGA ATGTCCTGGT 420 TCACTTAGGG TACCCGGAGG ATGTAACAAT CCTTGTACCA CGTTCGGAGG ACAACAATAT 11587 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACTTAGGG TACCCGGAGG ATGTAACAAT CCTTGTACCA CGTTCGGAGG ACAACAATAT 480 TGTTGCACAC AAGGTCCATG TGGCCCTACT GATTTGTCGA GATTTTTCAA ACAAAGATGT 11527 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTGCACAC AAGGTCCATG TGGCCCTACT GATTTGTCGA GATTTTTCAA ACAAAGATGT 540 CCTGATGCGT ATAGCTACCC ACAAGATGAT CCTACTAGCA CATTTACTTG CCCTAGTGGT 11467 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTGATGCGT ATAGCTACCC ACAAGATGAT CCTACTAGCA CATTTACTTG CCCTAGTGGT 600 AGTACAAATT ATAGGGTTGT TTTTTGTCCT AATGGTGTTA CTAGCCCAAA TTTCCCCTTG 11407 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTACAAATT ATAGGGTTGT TTTTTGTCCT AATGGTGTTA CTAGCCCAAA TTTCCCCTTG 660 GAGATGCCCT CAAGTGATGA AGAGGCTAAG TAAAATTGAG TCACTTTCTT TTAAATTGCT 11347 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGATGCCCT CAAGTGATGA AGAGGCTAAG TAAAATTGAG TCACTTTCTT TTAAATTGCT 720 TGAAGTAGTC GAGTTATATA ATTGGCTTGT AATAAACCTA ATATAATTAC ATGAATAAAA 11287 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAGTAGTC GAGTTATATA ATTGGCTTGT AATAAACCTA ATATAATTAC ATGAATAAAA 780 GTCACATCAT CACAAA 11271 |||||||||| |||||| GTCACATCAT CACAAA 796 hqPGS_C08HBa0235H18.1-_SGN-E540205- (12066 11271) ******************************************************************************** EST sequence 111 -strand 667 n (File: SGN-E302617-) 1 GATGGCACGT ATATGGGGTC GTACGAATTG CAACTTTGAT GGTGCTGGTA GAGGTTCATG 61 TCAGACTGGT GATTGTGGTG GGGTCTTGCA ATGTACCGGG TGGGGCAAAC CACCAAACAC 121 CCTGGCCGAG TACGCCTTGG ACCAGTTTAG CAACCTAGAT TTCTGGGACA TTTCTTTAGT 181 CGATGGATTT AATATTCCAA TGACTTTCGC CCCGACCAAT CCTAGTGGAG GGAAATGCCA 241 TGCAATTCAT TGTACGGCTA ATATAAATGG TGAATGTCCT GGTTCACTTA GGGTACCCGG 301 AGGATGTAAC AATCCTTGTA CCACGTTCGG AGGACAACAA TATTGTTGCA CACAAGGTCC 361 ATGTGGCCCT ACTGATTTGT CGAGATTTTT CAAACAAAGA TGTCCTGATG CGTATAGCTA 421 CCCACAAGAT GATCCTACTA GCACATTTAC TTGCCCTAGT GGTAGTACAA ATTATAGGGT 481 TGTTTTTTGT CCTAATGGTG TTACTAGCCC AAATTTCCCC TTGGAGATGC CCTCAAGTGA 541 TGAAGAGGCT AAGTAAAATT GAGTCACTTT CTTTTAAATT GCTTGAAGTA GTCGAGTTAT 601 ATAATTGGCT TGTAATAAAC CTAATATAAT TACATGAATA AAAGTCACAT CATCACAAAA 661 AAAAAAA Predicted gene structure (within gDNA segment 12539 to 10591): Exon 1 11929 11271 ( 659 n); cDNA 1 659 ( 659 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E302617- 1.000 659 0.988 C PGS_C08HBa0235H18.1-_SGN-E302617- (11929 11271) Alignment (genomic DNA sequence = upper lines): GATGGCACGT ATATGGGGTC GTACGAATTG CAACTTTGAT GGTGCTGGTA GAGGTTCATG 11870 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGGCACGT ATATGGGGTC GTACGAATTG CAACTTTGAT GGTGCTGGTA GAGGTTCATG 60 TCAGACTGGT GATTGTGGTG GGGTCTTGCA ATGTACCGGG TGGGGCAAAC CACCAAACAC 11810 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAGACTGGT GATTGTGGTG GGGTCTTGCA ATGTACCGGG TGGGGCAAAC CACCAAACAC 120 CCTGGCCGAG TACGCCTTGG ACCAGTTTAG CAACCTAGAT TTCTGGGACA TTTCTTTAGT 11750 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTGGCCGAG TACGCCTTGG ACCAGTTTAG CAACCTAGAT TTCTGGGACA TTTCTTTAGT 180 CGATGGATTT AATATTCCAA TGACTTTCGC CCCGACCAAT CCTAGTGGAG GGAAATGCCA 11690 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGATGGATTT AATATTCCAA TGACTTTCGC CCCGACCAAT CCTAGTGGAG GGAAATGCCA 240 TGCAATTCAT TGTACGGCTA ATATAAATGG TGAATGTCCT GGTTCACTTA GGGTACCCGG 11630 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCAATTCAT TGTACGGCTA ATATAAATGG TGAATGTCCT GGTTCACTTA GGGTACCCGG 300 AGGATGTAAC AATCCTTGTA CCACGTTCGG AGGACAACAA TATTGTTGCA CACAAGGTCC 11570 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGATGTAAC AATCCTTGTA CCACGTTCGG AGGACAACAA TATTGTTGCA CACAAGGTCC 360 ATGTGGCCCT ACTGATTTGT CGAGATTTTT CAAACAAAGA TGTCCTGATG CGTATAGCTA 11510 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGTGGCCCT ACTGATTTGT CGAGATTTTT CAAACAAAGA TGTCCTGATG CGTATAGCTA 420 CCCACAAGAT GATCCTACTA GCACATTTAC TTGCCCTAGT GGTAGTACAA ATTATAGGGT 11450 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCACAAGAT GATCCTACTA GCACATTTAC TTGCCCTAGT GGTAGTACAA ATTATAGGGT 480 TGTTTTTTGT CCTAATGGTG TTACTAGCCC AAATTTCCCC TTGGAGATGC CCTCAAGTGA 11390 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTTTTTGT CCTAATGGTG TTACTAGCCC AAATTTCCCC TTGGAGATGC CCTCAAGTGA 540 TGAAGAGGCT AAGTAAAATT GAGTCACTTT CTTTTAAATT GCTTGAAGTA GTCGAGTTAT 11330 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAGAGGCT AAGTAAAATT GAGTCACTTT CTTTTAAATT GCTTGAAGTA GTCGAGTTAT 600 ATAATTGGCT TGTAATAAAC CTAATATAAT TACATGAATA AAAGTCACAT CATCACAAA 11271 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| ATAATTGGCT TGTAATAAAC CTAATATAAT TACATGAATA AAAGTCACAT CATCACAAA 659 hqPGS_C08HBa0235H18.1-_SGN-E302617- (11929 11271) ******************************************************************************** EST sequence 1215 +strand 583 n (File: SGN-E349926+) 1 GCTTGCTATG TACCGGGTGG GGCAAACCAC CAAACACCCT GGCCGAGTAC GCCTTGGACC 61 AGTTTACCAA CCTATATTTC TGGGACATTT CTTTAATCGA TGGATTTAAT ATTCCAATGA 121 CTTTCTCCCC GACCAATCCT AGTGGAGGGA AATGCCATGC AATTCATTGT ACGGCTAATA 181 TAAATGGTGA ATGTCCTGGT TCACTTATGG TACCCGGAGG ATGTAACAAT CCTTGTACCA 241 CGTTCAGATG ACAACAATAT TGTTGCACAC AAGGTCCATG TGGCCCTACT GATTTGTCTA 301 GATTTTTCAA ACAAAGATGT CCTGATGCGT ATAGCTACCC ACAAGATGAT CCTACTATCA 361 CATTTACTTG CCCTAGTGGT AGTACAAATT ATAGGGTTGT TTTTTGTCCT AATGGAGTTA 421 CTAGCCCAAA TTTCCCCTTG GAGATGCCCT CTAGTGATGA AGAGGCTAAG TAAAATTGAG 481 TCACTTTCTT TTAAAATGCT TGAAGTACAC GAGTTATATA ATTGGCTTGT AATAAACCTA 541 ATATAATTAC ATGAATAAAA GTCACGTCAT CACGAAAAAA AAA Predicted gene structure (within gDNA segment 12509 to 10492): Exon 1 11845 11271 ( 575 n); cDNA 2 576 ( 575 n); score: 0.970 MATCH C08HBa0235H18.1- SGN-E349926+ 0.970 575 0.986 C PGS_C08HBa0235H18.1-_SGN-E349926+ (11845 11271) Alignment (genomic DNA sequence = upper lines): CTTGCAATGT ACCGGGTGGG GCAAACCACC AAACACCCTG GCCGAGTACG CCTTGGACCA 11786 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGCTATGT ACCGGGTGGG GCAAACCACC AAACACCCTG GCCGAGTACG CCTTGGACCA 61 GTTTAGCAAC CTAGATTTCT GGGACATTTC TTTAGTCGAT GGATTTAATA TTCCAATGAC 11726 ||||| |||| ||| |||||| |||||||||| |||| ||||| |||||||||| |||||||||| GTTTACCAAC CTATATTTCT GGGACATTTC TTTAATCGAT GGATTTAATA TTCCAATGAC 121 TTTCGCCCCG ACCAATCCTA GTGGAGGGAA ATGCCATGCA ATTCATTGTA CGGCTAATAT 11666 |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCTCCCCG ACCAATCCTA GTGGAGGGAA ATGCCATGCA ATTCATTGTA CGGCTAATAT 181 AAATGGTGAA TGTCCTGGTT CACTTAGGGT ACCCGGAGGA TGTAACAATC CTTGTACCAC 11606 |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| AAATGGTGAA TGTCCTGGTT CACTTATGGT ACCCGGAGGA TGTAACAATC CTTGTACCAC 241 GTTCGGAGGA CAACAATATT GTTGCACACA AGGTCCATGT GGCCCTACTG ATTTGTCGAG 11546 |||| || || |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || GTTCAGATGA CAACAATATT GTTGCACACA AGGTCCATGT GGCCCTACTG ATTTGTCTAG 301 ATTTTTCAAA CAAAGATGTC CTGATGCGTA TAGCTACCCA CAAGATGATC CTACTAGCAC 11486 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| ATTTTTCAAA CAAAGATGTC CTGATGCGTA TAGCTACCCA CAAGATGATC CTACTATCAC 361 ATTTACTTGC CCTAGTGGTA GTACAAATTA TAGGGTTGTT TTTTGTCCTA ATGGTGTTAC 11426 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| ATTTACTTGC CCTAGTGGTA GTACAAATTA TAGGGTTGTT TTTTGTCCTA ATGGAGTTAC 421 TAGCCCAAAT TTCCCCTTGG AGATGCCCTC AAGTGATGAA GAGGCTAAGT AAAATTGAGT 11366 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| TAGCCCAAAT TTCCCCTTGG AGATGCCCTC TAGTGATGAA GAGGCTAAGT AAAATTGAGT 481 CACTTTCTTT TAAATTGCTT GAAGTAGTCG AGTTATATAA TTGGCTTGTA ATAAACCTAA 11306 |||||||||| |||| ||||| |||||| || |||||||||| |||||||||| |||||||||| CACTTTCTTT TAAAATGCTT GAAGTACACG AGTTATATAA TTGGCTTGTA ATAAACCTAA 541 TATAATTACA TGAATAAAAG TCACATCATC ACAAA 11271 |||||||||| |||||||||| |||| ||||| || || TATAATTACA TGAATAAAAG TCACGTCATC ACGAA 576 hqPGS_C08HBa0235H18.1-_SGN-E349926+ (11845 11271) ******************************************************************************** EST sequence 554 +strand 580 n (File: SGN-E295156+) 1 GCAATGTACC GGGTGGGGCA AACCACCAAA CACCCTGGCC GAGTACGCCT TGGACCAGTT 61 TAGCAACCTA GATTTCTGGG ACATTTCTTT AGTCGATGGA TTTAATATTC CAATGACTTT 121 CGCCCCGACC AATCCTAGTG GAGGGAAATG CCATGCAATT CATTGTACGG CTAATATAAA 181 TGGTGAATGT CCTGGTTCAC TTAGGGTACC CGGAGGATGT AACAATCCTT GTACCACGTT 241 CGGAGGACAA CAATATTGTT GCACACAAGG TCCATGTGGC CCTACTGATT TGTCGAGATT 301 TTTCAAACAA AGATGTCCTG ATGCGTATAG CTACCCACAA GATGATCCTA CTAGCACATT 361 TACTTGCCCT AGTGGTAGTA CAAATTATAG GGTTGTTTTT TGTCCTAATG GTGTTACTAG 421 CCCAAATTTC CCCTTGGAGA TGCCCTCAAG TGATGAAGAG GCTAAGTAAA ATTGAGTCAC 481 TTTCTTTTAA ATTGCTTGAA GTAGTCGAGT TATATAATTG GCTTGGNATA AACCTAATAT 541 AATTACATGA ATAAAAGTCA CATCATCACA AAAAAAAAAA Predicted gene structure (within gDNA segment 12442 to 10581): Exon 1 11842 11271 ( 572 n); cDNA 1 572 ( 572 n); score: 0.997 MATCH C08HBa0235H18.1- SGN-E295156+ 0.997 572 0.986 C PGS_C08HBa0235H18.1-_SGN-E295156+ (11842 11271) Alignment (genomic DNA sequence = upper lines): GCAATGTACC GGGTGGGGCA AACCACCAAA CACCCTGGCC GAGTACGCCT TGGACCAGTT 11783 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAATGTACC GGGTGGGGCA AACCACCAAA CACCCTGGCC GAGTACGCCT TGGACCAGTT 60 TAGCAACCTA GATTTCTGGG ACATTTCTTT AGTCGATGGA TTTAATATTC CAATGACTTT 11723 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGCAACCTA GATTTCTGGG ACATTTCTTT AGTCGATGGA TTTAATATTC CAATGACTTT 120 CGCCCCGACC AATCCTAGTG GAGGGAAATG CCATGCAATT CATTGTACGG CTAATATAAA 11663 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCCCCGACC AATCCTAGTG GAGGGAAATG CCATGCAATT CATTGTACGG CTAATATAAA 180 TGGTGAATGT CCTGGTTCAC TTAGGGTACC CGGAGGATGT AACAATCCTT GTACCACGTT 11603 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTGAATGT CCTGGTTCAC TTAGGGTACC CGGAGGATGT AACAATCCTT GTACCACGTT 240 CGGAGGACAA CAATATTGTT GCACACAAGG TCCATGTGGC CCTACTGATT TGTCGAGATT 11543 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGAGGACAA CAATATTGTT GCACACAAGG TCCATGTGGC CCTACTGATT TGTCGAGATT 300 TTTCAAACAA AGATGTCCTG ATGCGTATAG CTACCCACAA GATGATCCTA CTAGCACATT 11483 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCAAACAA AGATGTCCTG ATGCGTATAG CTACCCACAA GATGATCCTA CTAGCACATT 360 TACTTGCCCT AGTGGTAGTA CAAATTATAG GGTTGTTTTT TGTCCTAATG GTGTTACTAG 11423 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACTTGCCCT AGTGGTAGTA CAAATTATAG GGTTGTTTTT TGTCCTAATG GTGTTACTAG 420 CCCAAATTTC CCCTTGGAGA TGCCCTCAAG TGATGAAGAG GCTAAGTAAA ATTGAGTCAC 11363 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCAAATTTC CCCTTGGAGA TGCCCTCAAG TGATGAAGAG GCTAAGTAAA ATTGAGTCAC 480 TTTCTTTTAA ATTGCTTGAA GTAGTCGAGT TATATAATTG GCTTGTAATA AACCTAATAT 11303 |||||||||| |||||||||| |||||||||| |||||||||| ||||| ||| |||||||||| TTTCTTTTAA ATTGCTTGAA GTAGTCGAGT TATATAATTG GCTTGGNATA AACCTAATAT 540 AATTACATGA ATAAAAGTCA CATCATCACA AA 11271 |||||||||| |||||||||| |||||||||| || AATTACATGA ATAAAAGTCA CATCATCACA AA 572 hqPGS_C08HBa0235H18.1-_SGN-E295156+ (11842 11271) ******************************************************************************** EST sequence 1134 +strand 563 n (File: SGN-E357558+) 1 GGCAAACCAC CAAACACCCT GGCCGAGTAC GCCTTGGACC AGTTTAGCAA CCTAGATTTC 61 TGGGACATTT CTTTAGTCGA TGGATTTAAT ATTCCAATGA CTTTCGCCCC GACCAATCCT 121 AGTGGAGGGA AATGCCATGC AATTCATTGT ACGGCTAATA TAAATGGTGA ATGTCCTGGT 181 TCACTTAGGG TACCCGGAGG ATGTAACAAT CCTTGTACCA CGTTCGGAGG ACAACAATAT 241 TGTTGCACAC AAGGTCCATG TGGCCCTACT GATTTGTCGA GATTTTTCAA ACAAAGATGT 301 CCTGATGCGT ATAGCTACCC ACAAGATGAT CCTACTAGCA CATTTACTTG CCCTAGTGGT 361 AGTACAAATT ATAGGGTTGT TTTTTGTCCT AATGGTGTTA CTAGCCCAAA TTTCCCCTTG 421 GAGATGCCCT CAAGTGATGA AGAGGCTAAG TAAAATTGAG TCACTTTCTT TTAAATTGCT 481 TGAAGTAGTC GAGTTATATA ATTGGCTTGT AATAAACCTA ATATAATTAC ATGAATAAAA 541 GTCACATCAT CACAAAAAAA AAA Predicted gene structure (within gDNA segment 12426 to 10591): Exon 1 11826 11271 ( 556 n); cDNA 1 556 ( 556 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E357558+ 1.000 556 0.988 C PGS_C08HBa0235H18.1-_SGN-E357558+ (11826 11271) Alignment (genomic DNA sequence = upper lines): GGCAAACCAC CAAACACCCT GGCCGAGTAC GCCTTGGACC AGTTTAGCAA CCTAGATTTC 11767 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCAAACCAC CAAACACCCT GGCCGAGTAC GCCTTGGACC AGTTTAGCAA CCTAGATTTC 60 TGGGACATTT CTTTAGTCGA TGGATTTAAT ATTCCAATGA CTTTCGCCCC GACCAATCCT 11707 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGGACATTT CTTTAGTCGA TGGATTTAAT ATTCCAATGA CTTTCGCCCC GACCAATCCT 120 AGTGGAGGGA AATGCCATGC AATTCATTGT ACGGCTAATA TAAATGGTGA ATGTCCTGGT 11647 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTGGAGGGA AATGCCATGC AATTCATTGT ACGGCTAATA TAAATGGTGA ATGTCCTGGT 180 TCACTTAGGG TACCCGGAGG ATGTAACAAT CCTTGTACCA CGTTCGGAGG ACAACAATAT 11587 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACTTAGGG TACCCGGAGG ATGTAACAAT CCTTGTACCA CGTTCGGAGG ACAACAATAT 240 TGTTGCACAC AAGGTCCATG TGGCCCTACT GATTTGTCGA GATTTTTCAA ACAAAGATGT 11527 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTGCACAC AAGGTCCATG TGGCCCTACT GATTTGTCGA GATTTTTCAA ACAAAGATGT 300 CCTGATGCGT ATAGCTACCC ACAAGATGAT CCTACTAGCA CATTTACTTG CCCTAGTGGT 11467 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTGATGCGT ATAGCTACCC ACAAGATGAT CCTACTAGCA CATTTACTTG CCCTAGTGGT 360 AGTACAAATT ATAGGGTTGT TTTTTGTCCT AATGGTGTTA CTAGCCCAAA TTTCCCCTTG 11407 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTACAAATT ATAGGGTTGT TTTTTGTCCT AATGGTGTTA CTAGCCCAAA TTTCCCCTTG 420 GAGATGCCCT CAAGTGATGA AGAGGCTAAG TAAAATTGAG TCACTTTCTT TTAAATTGCT 11347 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGATGCCCT CAAGTGATGA AGAGGCTAAG TAAAATTGAG TCACTTTCTT TTAAATTGCT 480 TGAAGTAGTC GAGTTATATA ATTGGCTTGT AATAAACCTA ATATAATTAC ATGAATAAAA 11287 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAGTAGTC GAGTTATATA ATTGGCTTGT AATAAACCTA ATATAATTAC ATGAATAAAA 540 GTCACATCAT CACAAA 11271 |||||||||| |||||| GTCACATCAT CACAAA 556 hqPGS_C08HBa0235H18.1-_SGN-E357558+ (11826 11271) ******************************************************************************** EST sequence 1178 +strand 563 n (File: SGN-E357673+) 1 GGCAAACCAC CAAACACCCT GGCCGAGTAC GCCTTGGACC AGTTTAGCAA CCTAGATTTC 61 TGGGACATTT CTTTAGTCGA TGGATTTAAT ATTCCAATGA CTTTCGCCCC GACCAATCCT 121 AGTGGAGGGA AATGCCATGC AATTCATTGT ACGGCTAATA TAAATGGTGA ATGTCCTGGT 181 TCACTTAGGG TACCCGGAGG ATGTAACAAT CCTTGTACCA CGTTCGGAGG ACAACAATAT 241 TGTTGCACAC AAGGTCCATG TGGCCCTACT GATTTGTCGA GATTTTTCAA ACAAAGATGT 301 CCTGATGCGT ATAGCTACCC ACAAGATGAT CCTACTAGCA CATTTACTTG CCCTAGTGGT 361 AGTACAAATT ATAGGGTTGT TTTTTGTCCT AATGGTGTTA CTAGCCCAAA TTTCCCCTTG 421 GAGATGCCCT CAAGTGATGA AGAGGCTAAG TAAAATTGAG TCACTTTCTT TTAAATTGCT 481 TGAAGTAGTC GAGTTATATA ATTGGCTTGT AATAAACCTA ATATAATTAC ATGAATAAAA 541 GTCACATCAT CACAAAAAAA AAA Predicted gene structure (within gDNA segment 12426 to 10591): Exon 1 11826 11271 ( 556 n); cDNA 1 556 ( 556 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E357673+ 1.000 556 0.988 C PGS_C08HBa0235H18.1-_SGN-E357673+ (11826 11271) Alignment (genomic DNA sequence = upper lines): GGCAAACCAC CAAACACCCT GGCCGAGTAC GCCTTGGACC AGTTTAGCAA CCTAGATTTC 11767 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCAAACCAC CAAACACCCT GGCCGAGTAC GCCTTGGACC AGTTTAGCAA CCTAGATTTC 60 TGGGACATTT CTTTAGTCGA TGGATTTAAT ATTCCAATGA CTTTCGCCCC GACCAATCCT 11707 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGGACATTT CTTTAGTCGA TGGATTTAAT ATTCCAATGA CTTTCGCCCC GACCAATCCT 120 AGTGGAGGGA AATGCCATGC AATTCATTGT ACGGCTAATA TAAATGGTGA ATGTCCTGGT 11647 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTGGAGGGA AATGCCATGC AATTCATTGT ACGGCTAATA TAAATGGTGA ATGTCCTGGT 180 TCACTTAGGG TACCCGGAGG ATGTAACAAT CCTTGTACCA CGTTCGGAGG ACAACAATAT 11587 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACTTAGGG TACCCGGAGG ATGTAACAAT CCTTGTACCA CGTTCGGAGG ACAACAATAT 240 TGTTGCACAC AAGGTCCATG TGGCCCTACT GATTTGTCGA GATTTTTCAA ACAAAGATGT 11527 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTGCACAC AAGGTCCATG TGGCCCTACT GATTTGTCGA GATTTTTCAA ACAAAGATGT 300 CCTGATGCGT ATAGCTACCC ACAAGATGAT CCTACTAGCA CATTTACTTG CCCTAGTGGT 11467 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTGATGCGT ATAGCTACCC ACAAGATGAT CCTACTAGCA CATTTACTTG CCCTAGTGGT 360 AGTACAAATT ATAGGGTTGT TTTTTGTCCT AATGGTGTTA CTAGCCCAAA TTTCCCCTTG 11407 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTACAAATT ATAGGGTTGT TTTTTGTCCT AATGGTGTTA CTAGCCCAAA TTTCCCCTTG 420 GAGATGCCCT CAAGTGATGA AGAGGCTAAG TAAAATTGAG TCACTTTCTT TTAAATTGCT 11347 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGATGCCCT CAAGTGATGA AGAGGCTAAG TAAAATTGAG TCACTTTCTT TTAAATTGCT 480 TGAAGTAGTC GAGTTATATA ATTGGCTTGT AATAAACCTA ATATAATTAC ATGAATAAAA 11287 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAGTAGTC GAGTTATATA ATTGGCTTGT AATAAACCTA ATATAATTAC ATGAATAAAA 540 GTCACATCAT CACAAA 11271 |||||||||| |||||| GTCACATCAT CACAAA 556 hqPGS_C08HBa0235H18.1-_SGN-E357673+ (11826 11271) ******************************************************************************** EST sequence 940 +strand 558 n (File: SGN-E353160+) 1 AAACCACCAA ACACCCTGGC CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG 61 GACATTTCTT TAGTCGATGG ATTTAATATT CCAATGACTT TCGCCCCGAC CAATCCTAGT 121 GGAGGGAAAT GCCATGCAAT TCATTGTACG GCTAATATAA ATGGTGAATG TCCTGGTTCA 181 CTTAGGGTAC CCGGAGGATG TAACAATCCT TGTACCACGT TCGGAGGACA ACAATATTGT 241 TGCACACAAG GTCCATGTGG CCCTACTGAT TTGTCGAGAT TTTTCAAACA AAGATGTCCT 301 GATGCGTATA GCTACCCACA AGATGATCCT ACTAGCACAT TTACTTGCCC TAGTGGTAGT 361 ACAAATTATA GGGTTGTTTT TTGTCCTAAT GGTGTTACTA GCCCAAATTT CCCCTTGGAG 421 ATGCCCTCAA GTGATGAAGA GGCTAAGTAA AATTGAGTCA CTTTCTTTTT AATTGCTTGA 481 AGTAGTCGAG TTTATATAAT TGGCTTGTAA TAAACCTAAT ATAATTACAT GAATAAAAGT 541 CACATCATCA CAAAAAAA Predicted gene structure (within gDNA segment 12432 to 10621): Exon 1 11823 11271 ( 553 n); cDNA 1 554 ( 554 n); score: 0.994 MATCH C08HBa0235H18.1- SGN-E353160+ 0.994 553 0.991 C PGS_C08HBa0235H18.1-_SGN-E353160+ (11823 11271) Alignment (genomic DNA sequence = upper lines): AAACCACCAA ACACCCTGGC CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG 11764 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACCACCAA ACACCCTGGC CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG 60 GACATTTCTT TAGTCGATGG ATTTAATATT CCAATGACTT TCGCCCCGAC CAATCCTAGT 11704 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACATTTCTT TAGTCGATGG ATTTAATATT CCAATGACTT TCGCCCCGAC CAATCCTAGT 120 GGAGGGAAAT GCCATGCAAT TCATTGTACG GCTAATATAA ATGGTGAATG TCCTGGTTCA 11644 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAGGGAAAT GCCATGCAAT TCATTGTACG GCTAATATAA ATGGTGAATG TCCTGGTTCA 180 CTTAGGGTAC CCGGAGGATG TAACAATCCT TGTACCACGT TCGGAGGACA ACAATATTGT 11584 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTAGGGTAC CCGGAGGATG TAACAATCCT TGTACCACGT TCGGAGGACA ACAATATTGT 240 TGCACACAAG GTCCATGTGG CCCTACTGAT TTGTCGAGAT TTTTCAAACA AAGATGTCCT 11524 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCACACAAG GTCCATGTGG CCCTACTGAT TTGTCGAGAT TTTTCAAACA AAGATGTCCT 300 GATGCGTATA GCTACCCACA AGATGATCCT ACTAGCACAT TTACTTGCCC TAGTGGTAGT 11464 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGCGTATA GCTACCCACA AGATGATCCT ACTAGCACAT TTACTTGCCC TAGTGGTAGT 360 ACAAATTATA GGGTTGTTTT TTGTCCTAAT GGTGTTACTA GCCCAAATTT CCCCTTGGAG 11404 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAATTATA GGGTTGTTTT TTGTCCTAAT GGTGTTACTA GCCCAAATTT CCCCTTGGAG 420 ATGCCCTCAA GTGATGAAGA GGCTAAGTAA AATTGAGTCA CTTTCTTTTA AATTGCTTGA 11344 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| ATGCCCTCAA GTGATGAAGA GGCTAAGTAA AATTGAGTCA CTTTCTTTTT AATTGCTTGA 480 AGTAGTCGAG -TTATATAAT TGGCTTGTAA TAAACCTAAT ATAATTACAT GAATAAAAGT 11285 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTAGTCGAG TTTATATAAT TGGCTTGTAA TAAACCTAAT ATAATTACAT GAATAAAAGT 540 CACATCATCA CAAA 11271 |||||||||| |||| CACATCATCA CAAA 554 hqPGS_C08HBa0235H18.1-_SGN-E353160+ (11823 11271) ******************************************************************************** EST sequence 1186 +strand 561 n (File: SGN-E355505+) 1 AAACCACCAA ACACCCTGGC CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG 61 GACATTTCTT TAGTCGATGG ATTTAATATT CCAATGACTT TCGCCCCGAC CAATCCTAGT 121 GGAGGGAAAT GCCATGCAAT TCATTGTACG GCTAATATAA ATGGTGAATG TCCTGGTTCA 181 CTTAGGGTAC CCGGAGGATG TAACAATCCT TGTACCACGT TCGGAGGACA ACAATATTGT 241 TGCACACAAG GTCCATGTGG CCCTACTGAT TTGTCGAGAT TTTTCAAACA AAGATGTCCT 301 GATGCGTATA GCTACCCACA AGATGATCCT ACTAGCACAT TTACTTGCCC TAGTGGTAGT 361 ACAAATTATA GGGTTGTTTT TTGTCCTAAT GGTGTTACTA GCCCAAATTT CCCCTTGGAG 421 ATGCCCTCAA GTGATGAAGA GGCTAAGTAA AATTGAGTCA CTTTCTTTTA AATTGCTTGA 481 AGTAGTCGAG TTATATAATT GGCTTGTAAT AAACCTAATA TAATTACATG AATAAAAGTC 541 ACATCATCAC AAAAAAAAAA A Predicted gene structure (within gDNA segment 12432 to 10581): Exon 1 11823 11271 ( 553 n); cDNA 1 553 ( 553 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E355505+ 1.000 553 0.986 C PGS_C08HBa0235H18.1-_SGN-E355505+ (11823 11271) Alignment (genomic DNA sequence = upper lines): AAACCACCAA ACACCCTGGC CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG 11764 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACCACCAA ACACCCTGGC CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG 60 GACATTTCTT TAGTCGATGG ATTTAATATT CCAATGACTT TCGCCCCGAC CAATCCTAGT 11704 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACATTTCTT TAGTCGATGG ATTTAATATT CCAATGACTT TCGCCCCGAC CAATCCTAGT 120 GGAGGGAAAT GCCATGCAAT TCATTGTACG GCTAATATAA ATGGTGAATG TCCTGGTTCA 11644 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAGGGAAAT GCCATGCAAT TCATTGTACG GCTAATATAA ATGGTGAATG TCCTGGTTCA 180 CTTAGGGTAC CCGGAGGATG TAACAATCCT TGTACCACGT TCGGAGGACA ACAATATTGT 11584 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTAGGGTAC CCGGAGGATG TAACAATCCT TGTACCACGT TCGGAGGACA ACAATATTGT 240 TGCACACAAG GTCCATGTGG CCCTACTGAT TTGTCGAGAT TTTTCAAACA AAGATGTCCT 11524 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCACACAAG GTCCATGTGG CCCTACTGAT TTGTCGAGAT TTTTCAAACA AAGATGTCCT 300 GATGCGTATA GCTACCCACA AGATGATCCT ACTAGCACAT TTACTTGCCC TAGTGGTAGT 11464 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGCGTATA GCTACCCACA AGATGATCCT ACTAGCACAT TTACTTGCCC TAGTGGTAGT 360 ACAAATTATA GGGTTGTTTT TTGTCCTAAT GGTGTTACTA GCCCAAATTT CCCCTTGGAG 11404 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAATTATA GGGTTGTTTT TTGTCCTAAT GGTGTTACTA GCCCAAATTT CCCCTTGGAG 420 ATGCCCTCAA GTGATGAAGA GGCTAAGTAA AATTGAGTCA CTTTCTTTTA AATTGCTTGA 11344 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGCCCTCAA GTGATGAAGA GGCTAAGTAA AATTGAGTCA CTTTCTTTTA AATTGCTTGA 480 AGTAGTCGAG TTATATAATT GGCTTGTAAT AAACCTAATA TAATTACATG AATAAAAGTC 11284 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTAGTCGAG TTATATAATT GGCTTGTAAT AAACCTAATA TAATTACATG AATAAAAGTC 540 ACATCATCAC AAA 11271 |||||||||| ||| ACATCATCAC AAA 553 hqPGS_C08HBa0235H18.1-_SGN-E355505+ (11823 11271) ******************************************************************************** EST sequence 1196 +strand 540 n (File: SGN-E355527+) 1 GAGTACGCCT TGGACCAGTT TAGCAACCTA GATTTCTGGG ACATTTCTTT AGTCGATGGA 61 TTTAATATTC CAATGACTTT CGCCCCGACC AATCCTAGTG GAGGGAAATG CCATGCAATT 121 CATTGTACGG CTAATATAAA TGGTGAATGT CCTGGTTCAC TTAGGGTACC CGGAGGATGT 181 AACAATCCTT GTACCACGTT CGGAGGACAA CAATATTGTT GCACACAAGG TCCATGTGGC 241 CCTACTGATT TGTCGAGATT TTTCAAACAA AGATGTCCTG ATGCGTATAG CTACCCACAA 301 GATGATCCTA CTAGCACATT TACTTGCCCT AGTGGTAGTA CAAATTATAG GGTTGTTTTT 361 TGTCCTAATG GTGTTACTAG CCCAAATTTC CCCTTGGAGA TGCCCTCAAG TGATGAAGAG 421 GCTAAGTAAA ATTGAGTCAC TTTCTTTTAA ATTGCTTGAA GTAGTCGAGT TATATAATTG 481 GCTTGTAATA AACCTAATAT AATTACATGA ATAAAAGTCA CATCATCACA AAAAAAAAAA Predicted gene structure (within gDNA segment 12402 to 10581): Exon 1 11802 11271 ( 532 n); cDNA 1 532 ( 532 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E355527+ 1.000 532 0.985 C PGS_C08HBa0235H18.1-_SGN-E355527+ (11802 11271) Alignment (genomic DNA sequence = upper lines): GAGTACGCCT TGGACCAGTT TAGCAACCTA GATTTCTGGG ACATTTCTTT AGTCGATGGA 11743 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGTACGCCT TGGACCAGTT TAGCAACCTA GATTTCTGGG ACATTTCTTT AGTCGATGGA 60 TTTAATATTC CAATGACTTT CGCCCCGACC AATCCTAGTG GAGGGAAATG CCATGCAATT 11683 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTAATATTC CAATGACTTT CGCCCCGACC AATCCTAGTG GAGGGAAATG CCATGCAATT 120 CATTGTACGG CTAATATAAA TGGTGAATGT CCTGGTTCAC TTAGGGTACC CGGAGGATGT 11623 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTGTACGG CTAATATAAA TGGTGAATGT CCTGGTTCAC TTAGGGTACC CGGAGGATGT 180 AACAATCCTT GTACCACGTT CGGAGGACAA CAATATTGTT GCACACAAGG TCCATGTGGC 11563 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACAATCCTT GTACCACGTT CGGAGGACAA CAATATTGTT GCACACAAGG TCCATGTGGC 240 CCTACTGATT TGTCGAGATT TTTCAAACAA AGATGTCCTG ATGCGTATAG CTACCCACAA 11503 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTACTGATT TGTCGAGATT TTTCAAACAA AGATGTCCTG ATGCGTATAG CTACCCACAA 300 GATGATCCTA CTAGCACATT TACTTGCCCT AGTGGTAGTA CAAATTATAG GGTTGTTTTT 11443 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGATCCTA CTAGCACATT TACTTGCCCT AGTGGTAGTA CAAATTATAG GGTTGTTTTT 360 TGTCCTAATG GTGTTACTAG CCCAAATTTC CCCTTGGAGA TGCCCTCAAG TGATGAAGAG 11383 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTCCTAATG GTGTTACTAG CCCAAATTTC CCCTTGGAGA TGCCCTCAAG TGATGAAGAG 420 GCTAAGTAAA ATTGAGTCAC TTTCTTTTAA ATTGCTTGAA GTAGTCGAGT TATATAATTG 11323 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTAAGTAAA ATTGAGTCAC TTTCTTTTAA ATTGCTTGAA GTAGTCGAGT TATATAATTG 480 GCTTGTAATA AACCTAATAT AATTACATGA ATAAAAGTCA CATCATCACA AA 11271 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || GCTTGTAATA AACCTAATAT AATTACATGA ATAAAAGTCA CATCATCACA AA 532 hqPGS_C08HBa0235H18.1-_SGN-E355527+ (11802 11271) ******************************************************************************** EST sequence 473 +strand 533 n (File: SGN-E351103+) 1 GCCTTGGACC AGTTTAGCAA CCTAGATTTC TGGGACATTT CTTTAGTCGA TGGATTTAAT 61 ATTCCAATGA CTTTCGCCCC GACCAATCCT AGTGGAGGGA AATGCCATGC AATTCATTGT 121 ACGGCTAATA TAAATGGTGA ATGTCCTGGT TCACTTAGGG TACCCGGAGG ATGTAACAAT 181 CCTTGTACCA CGTTCGGAGG ACAACAATAT TGTTGCACAC AAGGTCCATG TGGCCCTACT 241 GATTTGTCGA GATTTTTCAA ACAAAGATGT CCTGATGCGT ATAGCTACCC ACAAGATGAT 301 CCTACTAGCA CATTTACTTG CCCTAGTGGT AGTACAAATT ATAGGGTTGT TTTTTGTCCT 361 AATGGTGTTA CTAGCCCAAA TTTCCCCTTG GAGATGCCCT CAAGTGATGA AGAGGCTAAG 421 TAAAATTGAG TCACTTTCTT TTAAATTGCT TGAAGTAGTC GAGTTATATA ATTGGCTTGT 481 AATAAACCTA ATATAATTAC ATGAATAAAA GTCACATCAT CACAAAAAAA AAA Predicted gene structure (within gDNA segment 12396 to 10591): Exon 1 11796 11271 ( 526 n); cDNA 1 526 ( 526 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E351103+ 1.000 526 0.987 C PGS_C08HBa0235H18.1-_SGN-E351103+ (11796 11271) Alignment (genomic DNA sequence = upper lines): GCCTTGGACC AGTTTAGCAA CCTAGATTTC TGGGACATTT CTTTAGTCGA TGGATTTAAT 11737 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCTTGGACC AGTTTAGCAA CCTAGATTTC TGGGACATTT CTTTAGTCGA TGGATTTAAT 60 ATTCCAATGA CTTTCGCCCC GACCAATCCT AGTGGAGGGA AATGCCATGC AATTCATTGT 11677 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTCCAATGA CTTTCGCCCC GACCAATCCT AGTGGAGGGA AATGCCATGC AATTCATTGT 120 ACGGCTAATA TAAATGGTGA ATGTCCTGGT TCACTTAGGG TACCCGGAGG ATGTAACAAT 11617 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACGGCTAATA TAAATGGTGA ATGTCCTGGT TCACTTAGGG TACCCGGAGG ATGTAACAAT 180 CCTTGTACCA CGTTCGGAGG ACAACAATAT TGTTGCACAC AAGGTCCATG TGGCCCTACT 11557 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTGTACCA CGTTCGGAGG ACAACAATAT TGTTGCACAC AAGGTCCATG TGGCCCTACT 240 GATTTGTCGA GATTTTTCAA ACAAAGATGT CCTGATGCGT ATAGCTACCC ACAAGATGAT 11497 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATTTGTCGA GATTTTTCAA ACAAAGATGT CCTGATGCGT ATAGCTACCC ACAAGATGAT 300 CCTACTAGCA CATTTACTTG CCCTAGTGGT AGTACAAATT ATAGGGTTGT TTTTTGTCCT 11437 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTACTAGCA CATTTACTTG CCCTAGTGGT AGTACAAATT ATAGGGTTGT TTTTTGTCCT 360 AATGGTGTTA CTAGCCCAAA TTTCCCCTTG GAGATGCCCT CAAGTGATGA AGAGGCTAAG 11377 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGGTGTTA CTAGCCCAAA TTTCCCCTTG GAGATGCCCT CAAGTGATGA AGAGGCTAAG 420 TAAAATTGAG TCACTTTCTT TTAAATTGCT TGAAGTAGTC GAGTTATATA ATTGGCTTGT 11317 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAATTGAG TCACTTTCTT TTAAATTGCT TGAAGTAGTC GAGTTATATA ATTGGCTTGT 480 AATAAACCTA ATATAATTAC ATGAATAAAA GTCACATCAT CACAAA 11271 |||||||||| |||||||||| |||||||||| |||||||||| |||||| AATAAACCTA ATATAATTAC ATGAATAAAA GTCACATCAT CACAAA 526 hqPGS_C08HBa0235H18.1-_SGN-E351103+ (11796 11271) ******************************************************************************** EST sequence 1160 +strand 533 n (File: SGN-E357512+) 1 GCCTTGGACC AGTTTAGCAA CCTAGATTTC TGGGACATTT CTCCAGTCGA TGGATTTAAT 61 ATTCCAATGA CTTTCGCCCC GACCAATCCT AGTGGAGGGA AATGCCATGC AATTCATTGT 121 ACGGCTAATA TAAATGGTGA ATGTCCTGGT TCACTTAGGG TACCCGGAGG ATGTAACAAT 181 CCTTGTACCA CGTTCGGAGG ACAACAATAT TGTTGCACAC AAGGTCCATG TGGCCCTACT 241 GATTTGTCGA GATTTTTCAA ACAAAGATGT CCTGATGCGT ATAGCTACCC ACTAGATGAT 301 CCTACTAGCA CATTTACTTG CCCTAGTGGT AGTACAAATT ATAGGGTTGT TTTTTGTCCT 361 AATGGTGTTA CTAGCCCAAA TTTCCCCTTG GAGATGCCCT CAAGTGATGA AGAGGCTAAG 421 TAAAATTGAG TCACTTTCTT TTAAATTGCT TGAAGTAGTC GAGTTATATA ATTGGCTTGT 481 AATAAACCTA ATATAATTAC ATGAATAAAA GTCACATCAT CACAAAAAAA AAA Predicted gene structure (within gDNA segment 12396 to 10591): Exon 1 11796 11271 ( 526 n); cDNA 1 526 ( 526 n); score: 0.994 MATCH C08HBa0235H18.1- SGN-E357512+ 0.994 526 0.987 C PGS_C08HBa0235H18.1-_SGN-E357512+ (11796 11271) Alignment (genomic DNA sequence = upper lines): GCCTTGGACC AGTTTAGCAA CCTAGATTTC TGGGACATTT CTTTAGTCGA TGGATTTAAT 11737 |||||||||| |||||||||| |||||||||| |||||||||| || |||||| |||||||||| GCCTTGGACC AGTTTAGCAA CCTAGATTTC TGGGACATTT CTCCAGTCGA TGGATTTAAT 60 ATTCCAATGA CTTTCGCCCC GACCAATCCT AGTGGAGGGA AATGCCATGC AATTCATTGT 11677 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTCCAATGA CTTTCGCCCC GACCAATCCT AGTGGAGGGA AATGCCATGC AATTCATTGT 120 ACGGCTAATA TAAATGGTGA ATGTCCTGGT TCACTTAGGG TACCCGGAGG ATGTAACAAT 11617 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACGGCTAATA TAAATGGTGA ATGTCCTGGT TCACTTAGGG TACCCGGAGG ATGTAACAAT 180 CCTTGTACCA CGTTCGGAGG ACAACAATAT TGTTGCACAC AAGGTCCATG TGGCCCTACT 11557 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTGTACCA CGTTCGGAGG ACAACAATAT TGTTGCACAC AAGGTCCATG TGGCCCTACT 240 GATTTGTCGA GATTTTTCAA ACAAAGATGT CCTGATGCGT ATAGCTACCC ACAAGATGAT 11497 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| GATTTGTCGA GATTTTTCAA ACAAAGATGT CCTGATGCGT ATAGCTACCC ACTAGATGAT 300 CCTACTAGCA CATTTACTTG CCCTAGTGGT AGTACAAATT ATAGGGTTGT TTTTTGTCCT 11437 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTACTAGCA CATTTACTTG CCCTAGTGGT AGTACAAATT ATAGGGTTGT TTTTTGTCCT 360 AATGGTGTTA CTAGCCCAAA TTTCCCCTTG GAGATGCCCT CAAGTGATGA AGAGGCTAAG 11377 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGGTGTTA CTAGCCCAAA TTTCCCCTTG GAGATGCCCT CAAGTGATGA AGAGGCTAAG 420 TAAAATTGAG TCACTTTCTT TTAAATTGCT TGAAGTAGTC GAGTTATATA ATTGGCTTGT 11317 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAATTGAG TCACTTTCTT TTAAATTGCT TGAAGTAGTC GAGTTATATA ATTGGCTTGT 480 AATAAACCTA ATATAATTAC ATGAATAAAA GTCACATCAT CACAAA 11271 |||||||||| |||||||||| |||||||||| |||||||||| |||||| AATAAACCTA ATATAATTAC ATGAATAAAA GTCACATCAT CACAAA 526 hqPGS_C08HBa0235H18.1-_SGN-E357512+ (11796 11271) ******************************************************************************** EST sequence 505 +strand 530 n (File: SGN-E350942+) 1 TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG ATTTAATATT 61 CCAATGACTT TCGCCCCGAC CAATCCTAGT GGAGGGAAAT GCCATGCAAT TCATTGTACG 121 GCTAATATAA ATGGTGAATG TCCTGGTTCA CTTAGGGTAC CCGGAGGATG TAACAATCCT 181 TGTACCACGT TCGGAGGACA ACAATATTGT TGCACACAAG GTCCATGTGG CCCTACTGAT 241 TTGTCGAGAT TTTTCAAACA AAGATGTCCT GATGCGTATA GCTACCCACA AGATGATCCT 301 ACTAGCACAT TTACTTGCCC TAGTGGTAGT ACAAATTATA GGGTTGTTTT TTGTCCTAAT 361 GGTGTTACTA GCCCAAATTT CCCCTTGGAG ATGCCCTCAA GTGATGAAGA GGCTAAGTAA 421 AATTGAGTCA CTTTCTTTTA AATTGCTTGA AGTAGTCGAG TTATATAATT GGCTTGTAAT 481 AAACCTAATA TAATTACATG AATAAAAGTC ACATCATCAC AAAAAAAAAA Predicted gene structure (within gDNA segment 12393 to 10591): Exon 1 11793 11271 ( 523 n); cDNA 1 523 ( 523 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E350942+ 1.000 523 0.987 C PGS_C08HBa0235H18.1-_SGN-E350942+ (11793 11271) Alignment (genomic DNA sequence = upper lines): TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG ATTTAATATT 11734 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG ATTTAATATT 60 CCAATGACTT TCGCCCCGAC CAATCCTAGT GGAGGGAAAT GCCATGCAAT TCATTGTACG 11674 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAATGACTT TCGCCCCGAC CAATCCTAGT GGAGGGAAAT GCCATGCAAT TCATTGTACG 120 GCTAATATAA ATGGTGAATG TCCTGGTTCA CTTAGGGTAC CCGGAGGATG TAACAATCCT 11614 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTAATATAA ATGGTGAATG TCCTGGTTCA CTTAGGGTAC CCGGAGGATG TAACAATCCT 180 TGTACCACGT TCGGAGGACA ACAATATTGT TGCACACAAG GTCCATGTGG CCCTACTGAT 11554 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTACCACGT TCGGAGGACA ACAATATTGT TGCACACAAG GTCCATGTGG CCCTACTGAT 240 TTGTCGAGAT TTTTCAAACA AAGATGTCCT GATGCGTATA GCTACCCACA AGATGATCCT 11494 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTCGAGAT TTTTCAAACA AAGATGTCCT GATGCGTATA GCTACCCACA AGATGATCCT 300 ACTAGCACAT TTACTTGCCC TAGTGGTAGT ACAAATTATA GGGTTGTTTT TTGTCCTAAT 11434 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTAGCACAT TTACTTGCCC TAGTGGTAGT ACAAATTATA GGGTTGTTTT TTGTCCTAAT 360 GGTGTTACTA GCCCAAATTT CCCCTTGGAG ATGCCCTCAA GTGATGAAGA GGCTAAGTAA 11374 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGTTACTA GCCCAAATTT CCCCTTGGAG ATGCCCTCAA GTGATGAAGA GGCTAAGTAA 420 AATTGAGTCA CTTTCTTTTA AATTGCTTGA AGTAGTCGAG TTATATAATT GGCTTGTAAT 11314 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTGAGTCA CTTTCTTTTA AATTGCTTGA AGTAGTCGAG TTATATAATT GGCTTGTAAT 480 AAACCTAATA TAATTACATG AATAAAAGTC ACATCATCAC AAA 11271 |||||||||| |||||||||| |||||||||| |||||||||| ||| AAACCTAATA TAATTACATG AATAAAAGTC ACATCATCAC AAA 523 hqPGS_C08HBa0235H18.1-_SGN-E350942+ (11793 11271) ******************************************************************************** EST sequence 527 +strand 521 n (File: SGN-E351796+) 1 TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG GATTTAATAT TCCAATGACT 61 TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA TTCATTGTAC GGCTAATATA 121 AATGGTGAAT GTCCTGGTTC ACTTAGGGTA CCCGGAGGAT GTAACAATCC TTGTACCACG 181 TTCGGAGGAC AACAATATTG TTGCACACAA GGTCCATGTG GCCCTACTGA TTTGTCGAGA 241 TTTTTCAAAC AAAGATGTCC TGATGCGTAT AGCTACCCAC AAGATGATCC TACTAGCACA 301 TTTACTTGCC CTAGTGGTAG TACAAATTAT AGGGTTGTTT TTTGTCCTAA TGGTGTTACT 361 AGCCCAAATT TCCCCTTGGA GATGCCCTCA AGTGATGAAG AGGCTAAGTA AAATTGAGTC 421 ACTTTCTTTT AAATTGCTTG AAGTAGTCGA GTTATATAAT TGGCTTGTAA TAAACCTAAT 481 ATAATTACAT GAATAAAAGT CACATCATCA CAAAAAAAAA A Predicted gene structure (within gDNA segment 12384 to 10591): Exon 1 11784 11271 ( 514 n); cDNA 1 514 ( 514 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E351796+ 1.000 514 0.987 C PGS_C08HBa0235H18.1-_SGN-E351796+ (11784 11271) Alignment (genomic DNA sequence = upper lines): TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG GATTTAATAT TCCAATGACT 11725 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG GATTTAATAT TCCAATGACT 60 TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA TTCATTGTAC GGCTAATATA 11665 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA TTCATTGTAC GGCTAATATA 120 AATGGTGAAT GTCCTGGTTC ACTTAGGGTA CCCGGAGGAT GTAACAATCC TTGTACCACG 11605 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGGTGAAT GTCCTGGTTC ACTTAGGGTA CCCGGAGGAT GTAACAATCC TTGTACCACG 180 TTCGGAGGAC AACAATATTG TTGCACACAA GGTCCATGTG GCCCTACTGA TTTGTCGAGA 11545 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCGGAGGAC AACAATATTG TTGCACACAA GGTCCATGTG GCCCTACTGA TTTGTCGAGA 240 TTTTTCAAAC AAAGATGTCC TGATGCGTAT AGCTACCCAC AAGATGATCC TACTAGCACA 11485 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTTCAAAC AAAGATGTCC TGATGCGTAT AGCTACCCAC AAGATGATCC TACTAGCACA 300 TTTACTTGCC CTAGTGGTAG TACAAATTAT AGGGTTGTTT TTTGTCCTAA TGGTGTTACT 11425 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTACTTGCC CTAGTGGTAG TACAAATTAT AGGGTTGTTT TTTGTCCTAA TGGTGTTACT 360 AGCCCAAATT TCCCCTTGGA GATGCCCTCA AGTGATGAAG AGGCTAAGTA AAATTGAGTC 11365 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCCAAATT TCCCCTTGGA GATGCCCTCA AGTGATGAAG AGGCTAAGTA AAATTGAGTC 420 ACTTTCTTTT AAATTGCTTG AAGTAGTCGA GTTATATAAT TGGCTTGTAA TAAACCTAAT 11305 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTTCTTTT AAATTGCTTG AAGTAGTCGA GTTATATAAT TGGCTTGTAA TAAACCTAAT 480 ATAATTACAT GAATAAAAGT CACATCATCA CAAA 11271 |||||||||| |||||||||| |||||||||| |||| ATAATTACAT GAATAAAAGT CACATCATCA CAAA 514 hqPGS_C08HBa0235H18.1-_SGN-E351796+ (11784 11271) ******************************************************************************** EST sequence 1145 +strand 335 n (File: SGN-E310110+) 1 GGACAACAAT ATTGTTGCAC ACAAGGTCCA TGTGGCCCTA CTGATTTGTC GAGATTTTTC 61 AAACAAAGAT GTCCTGATGC GTATAGCTAC CCACAAGATG ATCCTACTAG CACATTTACT 121 TGCCCTAGTG GTAGTACAAA TTATAGGGTT GTTTTTTGTC CTAATGGTGT TACTAGCCCA 181 AATTTCCCCT TGGAGATGCC CTCAAGTGAT GAAGAGGCTA AGTAAAATTG AGTCACTTTC 241 TTTTAAATTG CTTGAAGTAG TCGAGTTATA TAATTGGCTT GTAATAAACC TAATATAATT 301 ACATGAATAA AAGTCACATC ATCACAAAAA AAAAA Predicted gene structure (within gDNA segment 12198 to 10591): Exon 1 11598 11271 ( 328 n); cDNA 1 328 ( 328 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E310110+ 1.000 328 0.979 C PGS_C08HBa0235H18.1-_SGN-E310110+ (11598 11271) Alignment (genomic DNA sequence = upper lines): GGACAACAAT ATTGTTGCAC ACAAGGTCCA TGTGGCCCTA CTGATTTGTC GAGATTTTTC 11539 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGACAACAAT ATTGTTGCAC ACAAGGTCCA TGTGGCCCTA CTGATTTGTC GAGATTTTTC 60 AAACAAAGAT GTCCTGATGC GTATAGCTAC CCACAAGATG ATCCTACTAG CACATTTACT 11479 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACAAAGAT GTCCTGATGC GTATAGCTAC CCACAAGATG ATCCTACTAG CACATTTACT 120 TGCCCTAGTG GTAGTACAAA TTATAGGGTT GTTTTTTGTC CTAATGGTGT TACTAGCCCA 11419 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCCCTAGTG GTAGTACAAA TTATAGGGTT GTTTTTTGTC CTAATGGTGT TACTAGCCCA 180 AATTTCCCCT TGGAGATGCC CTCAAGTGAT GAAGAGGCTA AGTAAAATTG AGTCACTTTC 11359 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTTCCCCT TGGAGATGCC CTCAAGTGAT GAAGAGGCTA AGTAAAATTG AGTCACTTTC 240 TTTTAAATTG CTTGAAGTAG TCGAGTTATA TAATTGGCTT GTAATAAACC TAATATAATT 11299 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTAAATTG CTTGAAGTAG TCGAGTTATA TAATTGGCTT GTAATAAACC TAATATAATT 300 ACATGAATAA AAGTCACATC ATCACAAA 11271 |||||||||| |||||||||| |||||||| ACATGAATAA AAGTCACATC ATCACAAA 328 hqPGS_C08HBa0235H18.1-_SGN-E310110+ (11598 11271) ******************************************************************************** EST sequence 491 +strand 321 n (File: SGN-E350856+) 1 TTGCACACAA GGTCCATGTG GCCCTACTGA TTTGTCGAGA TTTTTCAAAC AAAGATGTCC 61 TGATGCGTAT AGCTACCCAC AAGATGATCC TACTAGCACA TTTACTTGCC CTAGTGGTAG 121 TACAAATTAT AGGGTTGTTT TTTGTCCTAA TGGTGTTACT AGCCCAAATT TCCCCTTGGA 181 GATGCCCTCA AGTGATGAAG AGGCTAAGTA AAATTGAGTC ACTTTCTTTT AAATTGCTTG 241 AAGTAGTCGA GTTATATAAT TGGCTTGTAA TAAACCTAAT ATAATTACAT GAATAAAAGT 301 CACATCATCA CAAAAAAAAA A Predicted gene structure (within gDNA segment 12184 to 10591): Exon 1 11584 11271 ( 314 n); cDNA 1 314 ( 314 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E350856+ 1.000 314 0.978 C PGS_C08HBa0235H18.1-_SGN-E350856+ (11584 11271) Alignment (genomic DNA sequence = upper lines): TTGCACACAA GGTCCATGTG GCCCTACTGA TTTGTCGAGA TTTTTCAAAC AAAGATGTCC 11525 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCACACAA GGTCCATGTG GCCCTACTGA TTTGTCGAGA TTTTTCAAAC AAAGATGTCC 60 TGATGCGTAT AGCTACCCAC AAGATGATCC TACTAGCACA TTTACTTGCC CTAGTGGTAG 11465 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATGCGTAT AGCTACCCAC AAGATGATCC TACTAGCACA TTTACTTGCC CTAGTGGTAG 120 TACAAATTAT AGGGTTGTTT TTTGTCCTAA TGGTGTTACT AGCCCAAATT TCCCCTTGGA 11405 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACAAATTAT AGGGTTGTTT TTTGTCCTAA TGGTGTTACT AGCCCAAATT TCCCCTTGGA 180 GATGCCCTCA AGTGATGAAG AGGCTAAGTA AAATTGAGTC ACTTTCTTTT AAATTGCTTG 11345 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGCCCTCA AGTGATGAAG AGGCTAAGTA AAATTGAGTC ACTTTCTTTT AAATTGCTTG 240 AAGTAGTCGA GTTATATAAT TGGCTTGTAA TAAACCTAAT ATAATTACAT GAATAAAAGT 11285 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTAGTCGA GTTATATAAT TGGCTTGTAA TAAACCTAAT ATAATTACAT GAATAAAAGT 300 CACATCATCA CAAA 11271 |||||||||| |||| CACATCATCA CAAA 314 hqPGS_C08HBa0235H18.1-_SGN-E350856+ (11584 11271) ******************************************************************************** EST sequence 233 -strand 520 n (File: SGN-E295085-) 1 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG 61 GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG 121 GGTACCCGGA GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT ATTGTTGCAC 181 ACAAGGTCCA TGTGGCCCTA CTGATTTGTC GAGATTTTTC AAACAAAGAT GTCCTGATGC 241 GTATAGCTAC CCACAAGATG ATCCTACTAG CACATTTACT TGCCCTAGTG GTAGTACAAA 301 TTATAGGGTT GTTTTTTGTC CTAATGGTGT TACTAGCCCA AATTTCCCCT TGGAGATGCC 361 CTCAAGTGAT GAAGAGGCTA AGTAAAATTG AGTCACTTTC TTTTAAATTG CTTGAAGTAG 421 TCGAGTTATA TAATTGGCTT GTAATAAACC TAATATAATT ACATGAATAA AAGTCACATC 481 ATCACAAAAA AAAAAAAAAA AAAACTCAGA CTAGTTCTCT Predicted gene structure (within gDNA segment 12368 to 10351): Exon 1 11758 11272 ( 487 n); cDNA 1 487 ( 487 n); score: 1.000 PPA cDNA 488 505 MATCH C08HBa0235H18.1- SGN-E295085- 1.000 487 0.937 C PGS_C08HBa0235H18.1-_SGN-E295085- (11758 11272) Alignment (genomic DNA sequence = upper lines): TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG 11699 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG 60 GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG 11639 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG 120 GGTACCCGGA GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT ATTGTTGCAC 11579 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTACCCGGA GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT ATTGTTGCAC 180 ACAAGGTCCA TGTGGCCCTA CTGATTTGTC GAGATTTTTC AAACAAAGAT GTCCTGATGC 11519 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAGGTCCA TGTGGCCCTA CTGATTTGTC GAGATTTTTC AAACAAAGAT GTCCTGATGC 240 GTATAGCTAC CCACAAGATG ATCCTACTAG CACATTTACT TGCCCTAGTG GTAGTACAAA 11459 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTATAGCTAC CCACAAGATG ATCCTACTAG CACATTTACT TGCCCTAGTG GTAGTACAAA 300 TTATAGGGTT GTTTTTTGTC CTAATGGTGT TACTAGCCCA AATTTCCCCT TGGAGATGCC 11399 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTATAGGGTT GTTTTTTGTC CTAATGGTGT TACTAGCCCA AATTTCCCCT TGGAGATGCC 360 CTCAAGTGAT GAAGAGGCTA AGTAAAATTG AGTCACTTTC TTTTAAATTG CTTGAAGTAG 11339 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCAAGTGAT GAAGAGGCTA AGTAAAATTG AGTCACTTTC TTTTAAATTG CTTGAAGTAG 420 TCGAGTTATA TAATTGGCTT GTAATAAACC TAATATAATT ACATGAATAA AAGTCACATC 11279 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGAGTTATA TAATTGGCTT GTAATAAACC TAATATAATT ACATGAATAA AAGTCACATC 480 ATCACAA 11272 ||||||| ATCACAA 487 hqPGS_C08HBa0235H18.1-_SGN-E295085- (11758 11272) ******************************************************************************** EST sequence 980 +strand 547 n (File: SGN-E354307+) 1 GGCAAACCAC CAAACACCCT GGCCGAGTAC GCCTTGGACC AGTTTAGCAA CCTAGATTTC 61 TGGGACATTT CTTTAGTCGA TGGATTTAAT ATTCCAATGA CTTTCGCCCC GACCAATCCT 121 AGTGGAGGGA AATGCCATGC AATTCATTGT ACGGCTAATA TAAATGGTGA ATGTCCTGGT 181 TCACTTAGGG TACCCGGAGG ATGTAACAAT CCTTGTACCA CGTTCGGAGG ACAACAATAT 241 TGTTGCACAC AAGGTCCATG TGGCCCTACT GATTTGTCGA GATTTTTCAA ACAAAGATGT 301 CCTGATGCGT ATAGCTACCC ACAAGATGAT CCTACTAGCA CATTTACTTG CCCTAGTGGT 361 AGTACAAATT ATAGGGTTGT TTTTTGTCCT AATGGTGTTA CTAGCCCAAA TTTCCCCTTG 421 GAGATGCCCT CAAGTGATGA AGAGGCTAAG TAAAATTGAG TCACTTTCTT TTAAATTGCT 481 TGAAGTAGTC GAGTTATATA ATTGGCTTGT AATAAACCTA ATATAATTAC ATGAATAAAA 541 GTCACAT Predicted gene structure (within gDNA segment 12426 to 10670): Exon 1 11826 11280 ( 547 n); cDNA 1 547 ( 547 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E354307+ 1.000 547 1.000 C PGS_C08HBa0235H18.1-_SGN-E354307+ (11826 11280) Alignment (genomic DNA sequence = upper lines): GGCAAACCAC CAAACACCCT GGCCGAGTAC GCCTTGGACC AGTTTAGCAA CCTAGATTTC 11767 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCAAACCAC CAAACACCCT GGCCGAGTAC GCCTTGGACC AGTTTAGCAA CCTAGATTTC 60 TGGGACATTT CTTTAGTCGA TGGATTTAAT ATTCCAATGA CTTTCGCCCC GACCAATCCT 11707 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGGACATTT CTTTAGTCGA TGGATTTAAT ATTCCAATGA CTTTCGCCCC GACCAATCCT 120 AGTGGAGGGA AATGCCATGC AATTCATTGT ACGGCTAATA TAAATGGTGA ATGTCCTGGT 11647 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTGGAGGGA AATGCCATGC AATTCATTGT ACGGCTAATA TAAATGGTGA ATGTCCTGGT 180 TCACTTAGGG TACCCGGAGG ATGTAACAAT CCTTGTACCA CGTTCGGAGG ACAACAATAT 11587 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACTTAGGG TACCCGGAGG ATGTAACAAT CCTTGTACCA CGTTCGGAGG ACAACAATAT 240 TGTTGCACAC AAGGTCCATG TGGCCCTACT GATTTGTCGA GATTTTTCAA ACAAAGATGT 11527 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTGCACAC AAGGTCCATG TGGCCCTACT GATTTGTCGA GATTTTTCAA ACAAAGATGT 300 CCTGATGCGT ATAGCTACCC ACAAGATGAT CCTACTAGCA CATTTACTTG CCCTAGTGGT 11467 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTGATGCGT ATAGCTACCC ACAAGATGAT CCTACTAGCA CATTTACTTG CCCTAGTGGT 360 AGTACAAATT ATAGGGTTGT TTTTTGTCCT AATGGTGTTA CTAGCCCAAA TTTCCCCTTG 11407 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTACAAATT ATAGGGTTGT TTTTTGTCCT AATGGTGTTA CTAGCCCAAA TTTCCCCTTG 420 GAGATGCCCT CAAGTGATGA AGAGGCTAAG TAAAATTGAG TCACTTTCTT TTAAATTGCT 11347 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGATGCCCT CAAGTGATGA AGAGGCTAAG TAAAATTGAG TCACTTTCTT TTAAATTGCT 480 TGAAGTAGTC GAGTTATATA ATTGGCTTGT AATAAACCTA ATATAATTAC ATGAATAAAA 11287 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAGTAGTC GAGTTATATA ATTGGCTTGT AATAAACCTA ATATAATTAC ATGAATAAAA 540 GTCACAT 11280 ||||||| GTCACAT 547 hqPGS_C08HBa0235H18.1-_SGN-E354307+ (11826 11280) ******************************************************************************** EST sequence 831 +strand 672 n (File: SGN-E352685+) 1 GGTCATCAAT GCACCGAGGG GCACTAAGAT GGCACGTATA TGGGGTCGTA CGAATTGCAA 61 CTTTGATGGT GCTGGTAGAG GTTCATGTCA GACTGGTGAT TGTGGTGGGG TCTTGCAATG 121 TACCGGGTGG GGCAAACCAC CAAACACCCT GGCCGAGTAC GCCTTGGACC AGTTTAGCAA 181 CCTAGATTTC TGGGACATTT CTTTAGTCGA TGGATTTAAT ATTCCAATGA CTTTCGCCCC 241 GACCAATCCT AGTGGAGGGA AATGCCATGC AATTCATTGT ACGGCTAATA TAAATGGTGA 301 ATGTCCTGGT TCACTTAGGG TACCCGGAGG ATGTAACAAT CCTTGTACCA CGTTCGGAGG 361 ACAACAATAT TGTTGCACAC AAGGTCCATG TGGCCCTACT GATTTGTCGA GATTTTTCAA 421 ACAAAGATGT CCTGATGCGT ATAGCTACCC ACAAGATGAT CCTACTAGCA CATTTACTTG 481 CCCTAGTGGT AGTACAAATT ATAGGGTTGT TTTTTGTCCT AATGGTGTTA CTAGCCCAAA 541 TTTCCCCTTG GAGATGCCCT CAAGTGATGA AGAGGCTAAG TAAAATTGAG TCACTTTCTT 601 TTAAATTGCT TGAAGTAGTC GAGTTATATA ATTGGCTTGT AATAAACCTA ATATAATTAC 661 ATGAATAAAA GT Predicted gene structure (within gDNA segment 12556 to 10675): Exon 1 11956 11285 ( 672 n); cDNA 1 672 ( 672 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E352685+ 1.000 672 1.000 C PGS_C08HBa0235H18.1-_SGN-E352685+ (11956 11285) Alignment (genomic DNA sequence = upper lines): GGTCATCAAT GCACCGAGGG GCACTAAGAT GGCACGTATA TGGGGTCGTA CGAATTGCAA 11897 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTCATCAAT GCACCGAGGG GCACTAAGAT GGCACGTATA TGGGGTCGTA CGAATTGCAA 60 CTTTGATGGT GCTGGTAGAG GTTCATGTCA GACTGGTGAT TGTGGTGGGG TCTTGCAATG 11837 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTGATGGT GCTGGTAGAG GTTCATGTCA GACTGGTGAT TGTGGTGGGG TCTTGCAATG 120 TACCGGGTGG GGCAAACCAC CAAACACCCT GGCCGAGTAC GCCTTGGACC AGTTTAGCAA 11777 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACCGGGTGG GGCAAACCAC CAAACACCCT GGCCGAGTAC GCCTTGGACC AGTTTAGCAA 180 CCTAGATTTC TGGGACATTT CTTTAGTCGA TGGATTTAAT ATTCCAATGA CTTTCGCCCC 11717 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTAGATTTC TGGGACATTT CTTTAGTCGA TGGATTTAAT ATTCCAATGA CTTTCGCCCC 240 GACCAATCCT AGTGGAGGGA AATGCCATGC AATTCATTGT ACGGCTAATA TAAATGGTGA 11657 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCAATCCT AGTGGAGGGA AATGCCATGC AATTCATTGT ACGGCTAATA TAAATGGTGA 300 ATGTCCTGGT TCACTTAGGG TACCCGGAGG ATGTAACAAT CCTTGTACCA CGTTCGGAGG 11597 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGTCCTGGT TCACTTAGGG TACCCGGAGG ATGTAACAAT CCTTGTACCA CGTTCGGAGG 360 ACAACAATAT TGTTGCACAC AAGGTCCATG TGGCCCTACT GATTTGTCGA GATTTTTCAA 11537 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAACAATAT TGTTGCACAC AAGGTCCATG TGGCCCTACT GATTTGTCGA GATTTTTCAA 420 ACAAAGATGT CCTGATGCGT ATAGCTACCC ACAAGATGAT CCTACTAGCA CATTTACTTG 11477 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAAGATGT CCTGATGCGT ATAGCTACCC ACAAGATGAT CCTACTAGCA CATTTACTTG 480 CCCTAGTGGT AGTACAAATT ATAGGGTTGT TTTTTGTCCT AATGGTGTTA CTAGCCCAAA 11417 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCTAGTGGT AGTACAAATT ATAGGGTTGT TTTTTGTCCT AATGGTGTTA CTAGCCCAAA 540 TTTCCCCTTG GAGATGCCCT CAAGTGATGA AGAGGCTAAG TAAAATTGAG TCACTTTCTT 11357 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCCCCTTG GAGATGCCCT CAAGTGATGA AGAGGCTAAG TAAAATTGAG TCACTTTCTT 600 TTAAATTGCT TGAAGTAGTC GAGTTATATA ATTGGCTTGT AATAAACCTA ATATAATTAC 11297 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAAATTGCT TGAAGTAGTC GAGTTATATA ATTGGCTTGT AATAAACCTA ATATAATTAC 660 ATGAATAAAA GT 11285 |||||||||| || ATGAATAAAA GT 672 hqPGS_C08HBa0235H18.1-_SGN-E352685+ (11956 11285) ******************************************************************************** EST sequence 530 +strand 787 n (File: SGN-E340366+) 1 TGAGATCTTC TTTTGTTTTC TTCCTTCTTG CTTTTGTGAC TTACACTTAT GCTGCCACTT 61 TCGAGGTACG CAACAACTGT CCATACACCG TCTGGGCGGC GTCGACCCCA ATAGGCGGTG 121 GTCGACGTCT TGATCGAGGC CAAACATGGG TCATCAATGC ACCGAGGGGC ACTAAGATGG 181 CACGTATATG GGGTCGTACG AATTGCAACT TTGATGGTGC TGGTAGAGGT TCATGTCAGA 241 CTGGTGATTG TGGTGGGGTC TTGCAATGTA CCGGGTGGGG CAAACCACCA AACACCCTGG 301 CCGAGTACGC CTTGGACCAG TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG 361 GATTTAATAT TCCAATGACT TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA 421 TTCATTGTAC GGCTAATATA AATGGTGAAT GTCCTGGTTC ACTTAGGGTA CCCGGAGGAT 481 GTAACAATCC TTGTACCACG TTCGGAGGAC AACAATATTG TTGCACACAA GGTCCATGTG 541 GCCCTACTGA TTTGTCGAGA TTTTTAAACA AAGATGTCCT GATGCGTATA GCTACCCACA 601 AGATGATCCT ACTAGCACAT TTACTTGCCC TAGTGGTAGT ACAAATTATA NGGGTTGTTT 661 TTTGTCCTAA TGGTGTTACT AGCCCAAATT TCCCCTTGGA GATGCCCTCA AGTGATGAAG 721 AGGCTAAGTA AAATTGAGTC ACTTTCTTTT AAATTGCTTG AAGTAATCGA GTTATATAAT 781 TGGCTTG Predicted gene structure (within gDNA segment 12704 to 10708): Exon 1 12104 11318 ( 787 n); cDNA 1 787 ( 787 n); score: 0.994 MATCH C08HBa0235H18.1- SGN-E340366+ 0.994 787 1.000 C PGS_C08HBa0235H18.1-_SGN-E340366+ (12104 11318) Alignment (genomic DNA sequence = upper lines): TGAGATCTTC TTTTGTTTTC TTCCTTCTTG CTTTTGTGAC TTACACTTAT GCTGCCACTT 12045 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAGATCTTC TTTTGTTTTC TTCCTTCTTG CTTTTGTGAC TTACACTTAT GCTGCCACTT 60 TCGAGGTACG CAACAACTGT CCATACACCG TCTGGGCGGC GTCGACCCCA ATAGGCGGTG 11985 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGAGGTACG CAACAACTGT CCATACACCG TCTGGGCGGC GTCGACCCCA ATAGGCGGTG 120 GTCGACGTCT TGATCGAGGC CAAACATGGG TCATCAATGC ACCGAGGGGC ACTAAGATGG 11925 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCGACGTCT TGATCGAGGC CAAACATGGG TCATCAATGC ACCGAGGGGC ACTAAGATGG 180 CACGTATATG GGGTCGTACG AATTGCAACT TTGATGGTGC TGGTAGAGGT TCATGTCAGA 11865 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACGTATATG GGGTCGTACG AATTGCAACT TTGATGGTGC TGGTAGAGGT TCATGTCAGA 240 CTGGTGATTG TGGTGGGGTC TTGCAATGTA CCGGGTGGGG CAAACCACCA AACACCCTGG 11805 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGGTGATTG TGGTGGGGTC TTGCAATGTA CCGGGTGGGG CAAACCACCA AACACCCTGG 300 CCGAGTACGC CTTGGACCAG TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG 11745 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGAGTACGC CTTGGACCAG TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG 360 GATTTAATAT TCCAATGACT TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA 11685 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATTTAATAT TCCAATGACT TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA 420 TTCATTGTAC GGCTAATATA AATGGTGAAT GTCCTGGTTC ACTTAGGGTA CCCGGAGGAT 11625 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCATTGTAC GGCTAATATA AATGGTGAAT GTCCTGGTTC ACTTAGGGTA CCCGGAGGAT 480 GTAACAATCC TTGTACCACG TTCGGAGGAC AACAATATTG TTGCACACAA GGTCCATGTG 11565 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTAACAATCC TTGTACCACG TTCGGAGGAC AACAATATTG TTGCACACAA GGTCCATGTG 540 GCCCTACTGA TTTGTCGAGA TTTTTCAAAC AAAGATGTCC TGATGCGTAT AGCTACCCAC 11505 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| GCCCTACTGA TTTGTCGAGA TTTTT-AAAC AAAGATGTCC TGATGCGTAT AGCTACCCAC 599 AAGATGATCC TACTAGCACA TTTACTTGCC CTAGTGGTAG TACAAATTAT A-GGGTTGTT 11446 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| AAGATGATCC TACTAGCACA TTTACTTGCC CTAGTGGTAG TACAAATTAT ANGGGTTGTT 659 TTTTGTCCTA ATGGTGTTAC TAGCCCAAAT TTCCCCTTGG AGATGCCCTC AAGTGATGAA 11386 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTGTCCTA ATGGTGTTAC TAGCCCAAAT TTCCCCTTGG AGATGCCCTC AAGTGATGAA 719 GAGGCTAAGT AAAATTGAGT CACTTTCTTT TAAATTGCTT GAAGTAGTCG AGTTATATAA 11326 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| GAGGCTAAGT AAAATTGAGT CACTTTCTTT TAAATTGCTT GAAGTAATCG AGTTATATAA 779 TTGGCTTG 11318 |||||||| TTGGCTTG 787 hqPGS_C08HBa0235H18.1-_SGN-E340366+ (12104 11318) ******************************************************************************** EST sequence 476 +strand 592 n (File: SGN-E351033+) 1 TTTAGTCGAT GGATTTAATA TTCCAATGAC TTTTGCCCCA ACAAAACCTA GTGGAGGAAA 61 ATGTCACGCA ATTCATTGCA CGGCCAATAT AAATGGTGAA TGTCCTCGCG CCCTTAAGGT 121 ACCTGGAGGA TGTAACAACC CTTGTACCAC GTTTGGAGGA CAACAATATT GTTGCACCCA 181 AGGTCCATGT GGCCCTACAG AGTTGTCCAA ATTTTTCAAG AAAAGATGTC CCGATGCTTA 241 TAGCTACCCA CAAGACGATC CTACAAGCAC ATTTACTTGC CCTGGTGGTA GTACAAACTA 301 TAGGGTTGTC TTTTGTCCTA ATGGTGTTGC TGATCCAAAT TTCCCCTTGG AGATGCCTGC 361 AAGTACTGAT GAAGTGGCCA AGTGAATTTG AGTTTCTTCA TTTTAAATCG CCTCAATTAG 421 TCAACTGATC TCTACCGTAA TGAAAAATCT TAATAGCTCA GTTTTTTAAA TATTCACTTT 481 TACTTTATTG ATAAGAGTTC GTAACAAACT TAAAGACCGG AATAAGAGTT ACATCTCATG 541 TGTACTTTTG TCTTAGATGT ATAAAACAAC AGTGCATTTG AAAAAAAAAA AA Predicted gene structure (within gDNA segment 12355 to 8439): Exon 1 11755 11327 ( 429 n); cDNA 1 432 ( 432 n); score: 0.857 Intron 1 11326 11167 ( 160 n); Pd: 0.000 (s: 0.70), Pa: 0.000 (s: 0.58) Exon 2 11166 11089 ( 78 n); cDNA 433 508 ( 76 n); score: 0.622 Intron 2 11088 10237 ( 852 n); Pd: 0.000 (s: 0.60), Pa: 0.958 (s: 0) Exon 3 10236 10229 ( 8 n); cDNA 509 515 ( 7 n); score: 0.625 PPA cDNA 581 592 MATCH C08HBa0235H18.1- SGN-E351033+ 0.821 515 0.870 C PGS_C08HBa0235H18.1-_SGN-E351033+ (11755 11327,11166 11089,10236 10229) Alignment (genomic DNA sequence = upper lines): TTTAGTCGAT GGATTTAATA TTCCAATGAC TTTCGCCCCG ACCAATCCTA GTGGAGGGAA 11696 |||||||||| |||||||||| |||||||||| ||| ||||| || || |||| ||||||| || TTTAGTCGAT GGATTTAATA TTCCAATGAC TTTTGCCCCA ACAAAACCTA GTGGAGGAAA 60 ATGCCATGCA ATTCATTGTA CGGCTAATAT AAATGGTGAA TGTCCTGGTT CACTTAGGGT 11636 ||| || ||| |||||||| | |||| ||||| |||||||||| |||||| | | |||| ||| ATGTCACGCA ATTCATTGCA CGGCCAATAT AAATGGTGAA TGTCCTCGCG CCCTTAAGGT 120 ACCCGGAGGA TGTAACAATC CTTGTACCAC GTTCGGAGGA CAACAATATT GTTGCACACA 11576 ||| |||||| |||||||| | |||||||||| ||| |||||| |||||||||| ||||||| || ACCTGGAGGA TGTAACAACC CTTGTACCAC GTTTGGAGGA CAACAATATT GTTGCACCCA 180 AGGTCCATGT GGCCCTACTG ATTTGTCGAG ATTTTTCAAA CAAAGATGTC CTGATGCGTA 11516 |||||||||| |||||||| | | ||||| | ||||||||| ||||||||| | ||||| || AGGTCCATGT GGCCCTACAG AGTTGTCCAA ATTTTTCAAG AAAAGATGTC CCGATGCTTA 240 TAGCTACCCA CAAGATGATC CTACTAGCAC ATTTACTTGC CCTAGTGGTA GTACAAATTA 11456 |||||||||| ||||| |||| |||| ||||| |||||||||| ||| |||||| ||||||| || TAGCTACCCA CAAGACGATC CTACAAGCAC ATTTACTTGC CCTGGTGGTA GTACAAACTA 300 TAGGGTTGTT TTTTGTCCTA ATGGTGTTAC TAGCCCAAAT TTCCCCTTGG AGATGCCCTC 11396 ||||||||| |||||||||| |||||||| | | |||||| |||||||||| ||||||| | TAGGGTTGTC TTTTGTCCTA ATGGTGTTGC TGATCCAAAT TTCCCCTTGG AGATGCCTGC 360 AAG---TGAT GAAGAGGCTA AGTAAAATTG AGTCACTTTC TTTTAAATTG CTTGAAGTAG 11339 ||| |||| |||| ||| | ||| || ||| ||| ||| |||||||| | | | || ||| AAGTACTGAT GAAGTGGCCA AGTGAATTTG AGTTTCTTCA TTTTAAATCG CCTCAATTAG 420 TCGAGTTATA TAATTGGCTT GTAATAAACC TAATATAATT ACATGAATAA AAGTCACATC 11279 || | | || | TCAACTGATC TC........ .......... .......... .......... .......... 432 ATCACAAATA TGTTGTTTCG AATATTATTT TATGTATATT TTGTTATTTA CGTATTAACT 11219 .......... .......... .......... .......... .......... .......... 432 TGTCAAATAA AAGAATAATA TCAGTCAGTT TAAAAACATA AAAACTATAA TATACTGGAT 11159 ||| | | .......... .......... .......... .......... .......... ..TACCGTA- 439 AAGATAAATA AGAACATCTC ACGAGATTAT TTTATCTCAT TT-TTTTATA TGATAAAAGT 11100 | || |||| || | ||| | ||| | || | | || ||||| |||||| ||| ATGAAAAATC TTAATAGCTC AGTTTTTTAA ATATTCACTT TTACTTTAT- TGATAAGAGT 498 TCCATCACAA AATATAAAAA TAAAATAAAT TAATCTCAAA AGTAACTAGT ACCTTAAAAT 11040 | | | |||| | T-CGTAACAA A......... .......... .......... .......... .......... 508 AATATAAAAT AAAATAATCC CATTTTATTA GAAATTATTA TCCACAATTT TAGGGCAAAG 10980 .......... .......... .......... .......... .......... .......... 508 TCAAAAGTAG ATGGAAATAT TTGTTTATAG GCGGCTCTTA GAACATTTTC AAGCTAAATG 10920 .......... .......... .......... .......... .......... .......... 508 ATGTTAGCTG CACGTGCTAC TTGACACAAT GCCAAAAGAT TAAATTGAGC AAAATTTATA 10860 .......... .......... .......... .......... .......... .......... 508 TTTTTATTAA AAAAAATTAT ATTTATAAAC GTAGAAAATT CACTATTTTT TTTTTATCAT 10800 .......... .......... .......... .......... .......... .......... 508 TAACATGTTT TACATATTTT AGAGGATTAA GAGTGAAAAA GATTCTAATA ACTTGTTAAC 10740 .......... .......... .......... .......... .......... .......... 508 TTGATATAAT AGATTAACAA GTTGATTATA TCGCACTCTA AAGAATAAAA TGAATTGTCA 10680 .......... .......... .......... .......... .......... .......... 508 AAAATAATAT TAATAATTTA TCGCCACTCA AAAAAATAAA AAATATTGTA GAACGTGACT 10620 .......... .......... .......... .......... .......... .......... 508 TTATCAATAC TAATCTCTTT TAAAACAACG ATTGATTTGA ACTTCACCGA AATTGATGGA 10560 .......... .......... .......... .......... .......... .......... 508 ATGAAATGAC TAAATATTGT ATTGGGATAA AATAATGGGA TAATTGTATA TAATAGCAAA 10500 .......... .......... .......... .......... .......... .......... 508 CTAATAACCT AAAATAAATG GAGTAGCTAT GATTTGATTT AATTGTGCAC CATAGCAAAC 10440 .......... .......... .......... .......... .......... .......... 508 GTTAGCCAAA GTTTGTCAGT CGCCTCTCTC TCTTTATACA CAAAAGTGTA TAAATTGTGT 10380 .......... .......... .......... .......... .......... .......... 508 TTCTGTTTTG TATAAGCGAG AGAAAACTGT ATATACACAT GCAAAAACAT ATATCTTCGT 10320 .......... .......... .......... .......... .......... .......... 508 GTTATACACT TAATTATACA ATTTACAAAT ATTTTACTTC AATTCAATTG TAGACAAATG 10260 .......... .......... .......... .......... .......... .......... 508 CAAATTTTAT ACAAATATTG CAGCGAAAAA G 10229 | ||| | .......... .......... ...C-TTAAA G 515 hqPGS_C08HBa0235H18.1-_SGN-E351033+ (11755 11327) ******************************************************************************** EST sequence 1081 +strand 591 n (File: SGN-E356290+) 1 TTTAGTCGAT GGATTTAATA TTCCAATGAC TTTTGCCCCA ACAAAACCTA GTGGAGGAAA 61 ATGTCACGCA ATTCATTGCA CGGCCAATAT AAATGGTGAA TGTCCTCGCG CCCTTAAGGT 121 ACCTGGAGGA TGTAACAACC CTTGTACCAC GTTTGGAGGA CAACAATATT GTTGCACCCA 181 AGGTCCATGT GGCCCTACAG AGTTGTCCAA ATTTTTCAAG AAAAGATGTC CCGATGCTTA 241 TAGCTACCCA CAAGACGATC CTACAAGCAC ATTTACTTGC CCTGGTGGTA GTACAAACTA 301 TAGGGTTGTC TTTTGTCCTA ATGGTGTTGC TGATCCAAAT TTCCCCTTGG AGATGCCTGC 361 AAGTACTGAT GAAGTGGCCA AGTGAATTTG AGTTTCTTCA TTTTAAATCG CCTCAATTAG 421 TCAACTGATC TCTACCGTAA TGAAAAATCT TAATAGCTCA GTTTTTTAAA TATTCACTTT 481 TACTTTATTG ATAAGAGTTC GTAACAAACT TAAAGACCGG AATAAGAGTT ACATCTCATG 541 TGTACTTTTG TCTTAGATGT ATAAAACAAC AGTGCATTTG AAAAAAAAAA A Predicted gene structure (within gDNA segment 12355 to 8449): Exon 1 11755 11327 ( 429 n); cDNA 1 432 ( 432 n); score: 0.857 Intron 1 11326 11167 ( 160 n); Pd: 0.000 (s: 0.70), Pa: 0.000 (s: 0.58) Exon 2 11166 11089 ( 78 n); cDNA 433 508 ( 76 n); score: 0.622 PPA cDNA 581 591 MATCH C08HBa0235H18.1- SGN-E356290+ 0.821 507 0.858 C PGS_C08HBa0235H18.1-_SGN-E356290+ (11755 11327,11166 11089) Alignment (genomic DNA sequence = upper lines): TTTAGTCGAT GGATTTAATA TTCCAATGAC TTTCGCCCCG ACCAATCCTA GTGGAGGGAA 11696 |||||||||| |||||||||| |||||||||| ||| ||||| || || |||| ||||||| || TTTAGTCGAT GGATTTAATA TTCCAATGAC TTTTGCCCCA ACAAAACCTA GTGGAGGAAA 60 ATGCCATGCA ATTCATTGTA CGGCTAATAT AAATGGTGAA TGTCCTGGTT CACTTAGGGT 11636 ||| || ||| |||||||| | |||| ||||| |||||||||| |||||| | | |||| ||| ATGTCACGCA ATTCATTGCA CGGCCAATAT AAATGGTGAA TGTCCTCGCG CCCTTAAGGT 120 ACCCGGAGGA TGTAACAATC CTTGTACCAC GTTCGGAGGA CAACAATATT GTTGCACACA 11576 ||| |||||| |||||||| | |||||||||| ||| |||||| |||||||||| ||||||| || ACCTGGAGGA TGTAACAACC CTTGTACCAC GTTTGGAGGA CAACAATATT GTTGCACCCA 180 AGGTCCATGT GGCCCTACTG ATTTGTCGAG ATTTTTCAAA CAAAGATGTC CTGATGCGTA 11516 |||||||||| |||||||| | | ||||| | ||||||||| ||||||||| | ||||| || AGGTCCATGT GGCCCTACAG AGTTGTCCAA ATTTTTCAAG AAAAGATGTC CCGATGCTTA 240 TAGCTACCCA CAAGATGATC CTACTAGCAC ATTTACTTGC CCTAGTGGTA GTACAAATTA 11456 |||||||||| ||||| |||| |||| ||||| |||||||||| ||| |||||| ||||||| || TAGCTACCCA CAAGACGATC CTACAAGCAC ATTTACTTGC CCTGGTGGTA GTACAAACTA 300 TAGGGTTGTT TTTTGTCCTA ATGGTGTTAC TAGCCCAAAT TTCCCCTTGG AGATGCCCTC 11396 ||||||||| |||||||||| |||||||| | | |||||| |||||||||| ||||||| | TAGGGTTGTC TTTTGTCCTA ATGGTGTTGC TGATCCAAAT TTCCCCTTGG AGATGCCTGC 360 AAG---TGAT GAAGAGGCTA AGTAAAATTG AGTCACTTTC TTTTAAATTG CTTGAAGTAG 11339 ||| |||| |||| ||| | ||| || ||| ||| ||| |||||||| | | | || ||| AAGTACTGAT GAAGTGGCCA AGTGAATTTG AGTTTCTTCA TTTTAAATCG CCTCAATTAG 420 TCGAGTTATA TAATTGGCTT GTAATAAACC TAATATAATT ACATGAATAA AAGTCACATC 11279 || | | || | TCAACTGATC TC........ .......... .......... .......... .......... 432 ATCACAAATA TGTTGTTTCG AATATTATTT TATGTATATT TTGTTATTTA CGTATTAACT 11219 .......... .......... .......... .......... .......... .......... 432 TGTCAAATAA AAGAATAATA TCAGTCAGTT TAAAAACATA AAAACTATAA TATACTGGAT 11159 ||| | | .......... .......... .......... .......... .......... ..TACCGTA- 439 AAGATAAATA AGAACATCTC ACGAGATTAT TTTATCTCAT TT-TTTTATA TGATAAAAGT 11100 | || |||| || | ||| | ||| | || | | || ||||| |||||| ||| ATGAAAAATC TTAATAGCTC AGTTTTTTAA ATATTCACTT TTACTTTAT- TGATAAGAGT 498 TCCATCACAA A 11089 | | | |||| | T-CGTAACAA A 508 hqPGS_C08HBa0235H18.1-_SGN-E356290+ (11755 11327) ******************************************************************************** EST sequence 1113 +strand 406 n (File: SGN-E357088+) 1 GGCCCTACAG AGTTGTCCAA ATTTTTCAAG AAAAGATGTC CCGATGCTTA TAGCTACCCA 61 CAAGACGATC CTACAAGCAC ATTTACTTGC CCTGGTGGTA GTACAAACTA TAGGGTTGTC 121 TTTTGTCCTA ATGGTGTTGC TGATCCAAAT TTCCCCTTGG AGATGCCTGC AAGTACTGAT 181 GAAGTGGCCA AGTGAATTTG AGTTTCTTCA TTTTAAATCG CCTCAATTAG TCAACTGATC 241 TCTACCGTAA TGAAAAATCT TAATAGCTCA GTTTTTTAAA TATTCACTTT TACTTTATTG 301 ATAAGAGTTC GTAACAAACT TAAAGACCGG AATAAGAGTT ACATCTCATG TGTACTTTTG 361 TCTTAGATGT ATAAAACAAC AGTGCATTTG AATTAAAAAA AAAAAA Predicted gene structure (within gDNA segment 12597 to 8399): Exon 1 11565 11327 ( 239 n); cDNA 1 242 ( 242 n); score: 0.818 Intron 1 11326 11167 ( 160 n); Pd: 0.000 (s: 0.70), Pa: 0.000 (s: 0.58) Exon 2 11166 11089 ( 78 n); cDNA 243 318 ( 76 n); score: 0.622 Intron 2 11088 10237 ( 852 n); Pd: 0.000 (s: 0.60), Pa: 0.958 (s: 0) Exon 3 10236 10229 ( 8 n); cDNA 319 325 ( 7 n); score: 0.625 PPA cDNA 395 406 MATCH C08HBa0235H18.1- SGN-E357088+ 0.770 325 0.800 C PGS_C08HBa0235H18.1-_SGN-E357088+ (11565 11327,11166 11089,10236 10229) Alignment (genomic DNA sequence = upper lines): GGCCCTACTG ATTTGTCGAG ATTTTTCAAA CAAAGATGTC CTGATGCGTA TAGCTACCCA 11506 |||||||| | | ||||| | ||||||||| ||||||||| | ||||| || |||||||||| GGCCCTACAG AGTTGTCCAA ATTTTTCAAG AAAAGATGTC CCGATGCTTA TAGCTACCCA 60 CAAGATGATC CTACTAGCAC ATTTACTTGC CCTAGTGGTA GTACAAATTA TAGGGTTGTT 11446 ||||| |||| |||| ||||| |||||||||| ||| |||||| ||||||| || ||||||||| CAAGACGATC CTACAAGCAC ATTTACTTGC CCTGGTGGTA GTACAAACTA TAGGGTTGTC 120 TTTTGTCCTA ATGGTGTTAC TAGCCCAAAT TTCCCCTTGG AGATGCCCTC AAG---TGAT 11389 |||||||||| |||||||| | | |||||| |||||||||| ||||||| | ||| |||| TTTTGTCCTA ATGGTGTTGC TGATCCAAAT TTCCCCTTGG AGATGCCTGC AAGTACTGAT 180 GAAGAGGCTA AGTAAAATTG AGTCACTTTC TTTTAAATTG CTTGAAGTAG TCGAGTTATA 11329 |||| ||| | ||| || ||| ||| ||| |||||||| | | | || ||| || | | || GAAGTGGCCA AGTGAATTTG AGTTTCTTCA TTTTAAATCG CCTCAATTAG TCAACTGATC 240 TAATTGGCTT GTAATAAACC TAATATAATT ACATGAATAA AAGTCACATC ATCACAAATA 11269 | TC........ .......... .......... .......... .......... .......... 242 TGTTGTTTCG AATATTATTT TATGTATATT TTGTTATTTA CGTATTAACT TGTCAAATAA 11209 .......... .......... .......... .......... .......... .......... 242 AAGAATAATA TCAGTCAGTT TAAAAACATA AAAACTATAA TATACTGGAT AAGATAAATA 11149 ||| | | | || |||| .......... .......... .......... .......... ..TACCGTA- ATGAAAAATC 259 AGAACATCTC ACGAGATTAT TTTATCTCAT TT-TTTTATA TGATAAAAGT TCCATCACAA 11090 || | ||| | ||| | || | | || ||||| |||||| ||| | | | |||| TTAATAGCTC AGTTTTTTAA ATATTCACTT TTACTTTAT- TGATAAGAGT T-CGTAACAA 317 AATATAAAAA TAAAATAAAT TAATCTCAAA AGTAACTAGT ACCTTAAAAT AATATAAAAT 11030 | A......... .......... .......... .......... .......... .......... 318 AAAATAATCC CATTTTATTA GAAATTATTA TCCACAATTT TAGGGCAAAG TCAAAAGTAG 10970 .......... .......... .......... .......... .......... .......... 318 ATGGAAATAT TTGTTTATAG GCGGCTCTTA GAACATTTTC AAGCTAAATG ATGTTAGCTG 10910 .......... .......... .......... .......... .......... .......... 318 CACGTGCTAC TTGACACAAT GCCAAAAGAT TAAATTGAGC AAAATTTATA TTTTTATTAA 10850 .......... .......... .......... .......... .......... .......... 318 AAAAAATTAT ATTTATAAAC GTAGAAAATT CACTATTTTT TTTTTATCAT TAACATGTTT 10790 .......... .......... .......... .......... .......... .......... 318 TACATATTTT AGAGGATTAA GAGTGAAAAA GATTCTAATA ACTTGTTAAC TTGATATAAT 10730 .......... .......... .......... .......... .......... .......... 318 AGATTAACAA GTTGATTATA TCGCACTCTA AAGAATAAAA TGAATTGTCA AAAATAATAT 10670 .......... .......... .......... .......... .......... .......... 318 TAATAATTTA TCGCCACTCA AAAAAATAAA AAATATTGTA GAACGTGACT TTATCAATAC 10610 .......... .......... .......... .......... .......... .......... 318 TAATCTCTTT TAAAACAACG ATTGATTTGA ACTTCACCGA AATTGATGGA ATGAAATGAC 10550 .......... .......... .......... .......... .......... .......... 318 TAAATATTGT ATTGGGATAA AATAATGGGA TAATTGTATA TAATAGCAAA CTAATAACCT 10490 .......... .......... .......... .......... .......... .......... 318 AAAATAAATG GAGTAGCTAT GATTTGATTT AATTGTGCAC CATAGCAAAC GTTAGCCAAA 10430 .......... .......... .......... .......... .......... .......... 318 GTTTGTCAGT CGCCTCTCTC TCTTTATACA CAAAAGTGTA TAAATTGTGT TTCTGTTTTG 10370 .......... .......... .......... .......... .......... .......... 318 TATAAGCGAG AGAAAACTGT ATATACACAT GCAAAAACAT ATATCTTCGT GTTATACACT 10310 .......... .......... .......... .......... .......... .......... 318 TAATTATACA ATTTACAAAT ATTTTACTTC AATTCAATTG TAGACAAATG CAAATTTTAT 10250 .......... .......... .......... .......... .......... .......... 318 ACAAATATTG CAGCGAAAAA G 10229 | ||| | .......... ...C-TTAAA G 325 hqPGS_C08HBa0235H18.1-_SGN-E357088+ (11565 11327) ******************************************************************************** EST sequence 789 +strand 380 n (File: SGN-E353933+) 1 AGATGTCCCG ATGCTTATAG CTACCCACAA GACGATCCTA CAAGCACATT TACTTGCCCT 61 GGTGGTAGTA CAAACTATAG GGTTGTCTTT TGTCCTAATG GTGTTGCTGA TCCAAATTTC 121 CCCTTGGAGA TGCCTGCAAG TACTGATGAA GTGGCCAAGT GAATTTGAGT TTCTTCATTT 181 TAAATCGCCT CAATTAGTCA ACTGATCTCT ACCGTAATGA AAAATCTTAA TAGCTCAGTT 241 TTTTAAATAT TCACTTTTAC TTTATTGATA AGAGTTCGTA ACAAACTTAA AGACCGGAAT 301 AAGAGTTACA TCTCATGTGT ACTTTTGTCT TAGATGTATA AAACAACAGT GCATTTGAAT 361 TAAAAAAAAA AAAAAAAAAA Predicted gene structure (within gDNA segment 12267 to 8329): Exon 1 11532 11327 ( 206 n); cDNA 1 209 ( 209 n); score: 0.818 Intron 1 11326 11167 ( 160 n); Pd: 0.000 (s: 0.70), Pa: 0.000 (s: 0.58) Exon 2 11166 11089 ( 78 n); cDNA 210 285 ( 76 n); score: 0.622 Intron 2 11088 10237 ( 852 n); Pd: 0.000 (s: 0.60), Pa: 0.958 (s: 0) Exon 3 10236 10229 ( 8 n); cDNA 286 292 ( 7 n); score: 0.625 PPA cDNA 362 380 MATCH C08HBa0235H18.1- SGN-E353933+ 0.764 292 0.768 C PGS_C08HBa0235H18.1-_SGN-E353933+ (11532 11327,11166 11089,10236 10229) Alignment (genomic DNA sequence = upper lines): AGATGTCCTG ATGCGTATAG CTACCCACAA GATGATCCTA CTAGCACATT TACTTGCCCT 11473 |||||||| | |||| ||||| |||||||||| || ||||||| | |||||||| |||||||||| AGATGTCCCG ATGCTTATAG CTACCCACAA GACGATCCTA CAAGCACATT TACTTGCCCT 60 AGTGGTAGTA CAAATTATAG GGTTGTTTTT TGTCCTAATG GTGTTACTAG CCCAAATTTC 11413 ||||||||| |||| ||||| |||||| ||| |||||||||| ||||| || ||||||||| GGTGGTAGTA CAAACTATAG GGTTGTCTTT TGTCCTAATG GTGTTGCTGA TCCAAATTTC 120 CCCTTGGAGA TGCCCTCAAG ---TGATGAA GAGGCTAAGT AAAATTGAGT CACTTTCTTT 11356 |||||||||| |||| |||| ||||||| | ||| |||| || |||||| ||| ||| CCCTTGGAGA TGCCTGCAAG TACTGATGAA GTGGCCAAGT GAATTTGAGT TTCTTCATTT 180 TAAATTGCTT GAAGTAGTCG AGTTATATAA TTGGCTTGTA ATAAACCTAA TATAATTACA 11296 ||||| || | || ||||| | | || | TAAATCGCCT CAATTAGTCA ACTGATCTC. .......... .......... .......... 209 TGAATAAAAG TCACATCATC ACAAATATGT TGTTTCGAAT ATTATTTTAT GTATATTTTG 11236 .......... .......... .......... .......... .......... .......... 209 TTATTTACGT ATTAACTTGT CAAATAAAAG AATAATATCA GTCAGTTTAA AAACATAAAA 11176 .......... .......... .......... .......... .......... .......... 209 ACTATAATAT ACTGGATAAG ATAAATAAGA ACATCTCACG AGATTATTTT ATCTCATTT- 11117 | || | | | | | |||| | | | |||| ||| | || | ||| .........T ACCGTA-ATG AAAAATCTTA ATAGCTCAGT TTTTTAAATA TTCACTTTTA 259 TTTTATATGA TAAAAGTTCC ATCACAAAAT ATAAAAATAA AATAAATTAA TCTCAAAAGT 11057 ||||| ||| ||| |||| | | ||||| CTTTAT-TGA TAAGAGTT-C GTAACAAA.. .......... .......... .......... 285 AACTAGTACC TTAAAATAAT ATAAAATAAA ATAATCCCAT TTTATTAGAA ATTATTATCC 10997 .......... .......... .......... .......... .......... .......... 285 ACAATTTTAG GGCAAAGTCA AAAGTAGATG GAAATATTTG TTTATAGGCG GCTCTTAGAA 10937 .......... .......... .......... .......... .......... .......... 285 CATTTTCAAG CTAAATGATG TTAGCTGCAC GTGCTACTTG ACACAATGCC AAAAGATTAA 10877 .......... .......... .......... .......... .......... .......... 285 ATTGAGCAAA ATTTATATTT TTATTAAAAA AAATTATATT TATAAACGTA GAAAATTCAC 10817 .......... .......... .......... .......... .......... .......... 285 TATTTTTTTT TTATCATTAA CATGTTTTAC ATATTTTAGA GGATTAAGAG TGAAAAAGAT 10757 .......... .......... .......... .......... .......... .......... 285 TCTAATAACT TGTTAACTTG ATATAATAGA TTAACAAGTT GATTATATCG CACTCTAAAG 10697 .......... .......... .......... .......... .......... .......... 285 AATAAAATGA ATTGTCAAAA ATAATATTAA TAATTTATCG CCACTCAAAA AAATAAAAAA 10637 .......... .......... .......... .......... .......... .......... 285 TATTGTAGAA CGTGACTTTA TCAATACTAA TCTCTTTTAA AACAACGATT GATTTGAACT 10577 .......... .......... .......... .......... .......... .......... 285 TCACCGAAAT TGATGGAATG AAATGACTAA ATATTGTATT GGGATAAAAT AATGGGATAA 10517 .......... .......... .......... .......... .......... .......... 285 TTGTATATAA TAGCAAACTA ATAACCTAAA ATAAATGGAG TAGCTATGAT TTGATTTAAT 10457 .......... .......... .......... .......... .......... .......... 285 TGTGCACCAT AGCAAACGTT AGCCAAAGTT TGTCAGTCGC CTCTCTCTCT TTATACACAA 10397 .......... .......... .......... .......... .......... .......... 285 AAGTGTATAA ATTGTGTTTC TGTTTTGTAT AAGCGAGAGA AAACTGTATA TACACATGCA 10337 .......... .......... .......... .......... .......... .......... 285 AAAACATATA TCTTCGTGTT ATACACTTAA TTATACAATT TACAAATATT TTACTTCAAT 10277 .......... .......... .......... .......... .......... .......... 285 TCAATTGTAG ACAAATGCAA ATTTTATACA AATATTGCAG CGAAAAAG 10229 | |||| .......... .......... .......... .......... C-TTAAAG 292 hqPGS_C08HBa0235H18.1-_SGN-E353933+ (11532 11327) ******************************************************************************** EST sequence 558 +strand 722 n (File: SGN-E538599+) 1 CGTATATGGG GTCGTACTGG TTGCAACTTT AATGCTGCAG GCAGAGGTAC ATGTCAGACT 61 GGTGATTGTG GTGGAGTCTT ACAGTGTACC GGATGGGGCA AACCCCCAAA CACCCTAGCC 121 GAGTACGCCT TGGACCAGTT TAGCAACTTA GATTTTTGGG ACATTTCTTT AGTCGATGGA 181 TTTAATATTC CAATGACTTT TGCCCCAACA AAACCTAGTG GAGGAAAATG TCACGCAATT 241 CATTGCACGG CCAATATAAA TGGTGAATGT CCTCGCGCCC TTAAGGTACC TGGAGGATGT 301 AACAACCCTT GTACCACGTT TGGAGGACAA CAATATTGTT GCACCCAAGG TCCATGTGGC 361 CCTACAGAGT TGTCCAAATT TTTCAAGAAA AGATGTCCCG ATGCTTATAG CTACCCACAA 421 GACGATCCTA CAAGCACATT TACTTGCCCT GGTGGTAGTA CAAACTATAG GGTTGTCTTT 481 TGTCCTAATG GTGTTGCTGA TCCAAATTTC CCCTTGGAGA TGCCTGCAAG TACTGATGAA 541 GTGGCCAAGT GAATTTGAGT TTCTTCATTT TAAATCGCCT CAATTAGTCA ACTGATCTCT 601 ACCGTAATGA AAAATCTTAA TAGCTCAGTT TTTTAAATAT TCACTTTTAC TTTATTGATA 661 AGAGTTCGTA ACAAACTTAA AGAACCGGAA TAAGAGTTAC ATCTCATGTG TACTTTTGTC 721 TT Predicted gene structure (within gDNA segment 13575 to 8809): Exon 1 11922 11328 ( 595 n); cDNA 1 598 ( 598 n); score: 0.871 Intron 1 11327 10445 ( 883 n); Pd: 0.000 (s: 0.72), Pa: 0.122 (s: 0) Exon 2 10444 10430 ( 15 n); cDNA 599 613 ( 15 n); score: 0.600 MATCH C08HBa0235H18.1- SGN-E538599+ 0.871 610 0.845 C PGS_C08HBa0235H18.1-_SGN-E538599+ (11922 11328,10444 10430) Alignment (genomic DNA sequence = upper lines): CGTATATGGG GTCGTACGAA TTGCAACTTT GATGGTGCTG GTAGAGGTTC ATGTCAGACT 11863 |||||||||| ||||||| |||||||||| ||| ||| | | |||||| | |||||||||| CGTATATGGG GTCGTACTGG TTGCAACTTT AATGCTGCAG GCAGAGGTAC ATGTCAGACT 60 GGTGATTGTG GTGGGGTCTT GCAATGTACC GGGTGGGGCA AACCACCAAA CACCCTGGCC 11803 |||||||||| |||| ||||| || |||||| || ||||||| |||| ||||| |||||| ||| GGTGATTGTG GTGGAGTCTT ACAGTGTACC GGATGGGGCA AACCCCCAAA CACCCTAGCC 120 GAGTACGCCT TGGACCAGTT TAGCAACCTA GATTTCTGGG ACATTTCTTT AGTCGATGGA 11743 |||||||||| |||||||||| ||||||| || ||||| |||| |||||||||| |||||||||| GAGTACGCCT TGGACCAGTT TAGCAACTTA GATTTTTGGG ACATTTCTTT AGTCGATGGA 180 TTTAATATTC CAATGACTTT CGCCCCGACC AATCCTAGTG GAGGGAAATG CCATGCAATT 11683 |||||||||| |||||||||| ||||| || || ||||||| |||| ||||| || |||||| TTTAATATTC CAATGACTTT TGCCCCAACA AAACCTAGTG GAGGAAAATG TCACGCAATT 240 CATTGTACGG CTAATATAAA TGGTGAATGT CCTGGTTCAC TTAGGGTACC CGGAGGATGT 11623 ||||| |||| | |||||||| |||||||||| ||| | | | ||| |||||| ||||||||| CATTGCACGG CCAATATAAA TGGTGAATGT CCTCGCGCCC TTAAGGTACC TGGAGGATGT 300 AACAATCCTT GTACCACGTT CGGAGGACAA CAATATTGTT GCACACAAGG TCCATGTGGC 11563 ||||| |||| |||||||||| ||||||||| |||||||||| |||| ||||| |||||||||| AACAACCCTT GTACCACGTT TGGAGGACAA CAATATTGTT GCACCCAAGG TCCATGTGGC 360 CCTACTGATT TGTCGAGATT TTTCAAACAA AGATGTCCTG ATGCGTATAG CTACCCACAA 11503 ||||| || | |||| | ||| |||||| || |||||||| | |||| ||||| |||||||||| CCTACAGAGT TGTCCAAATT TTTCAAGAAA AGATGTCCCG ATGCTTATAG CTACCCACAA 420 GATGATCCTA CTAGCACATT TACTTGCCCT AGTGGTAGTA CAAATTATAG GGTTGTTTTT 11443 || ||||||| | |||||||| |||||||||| ||||||||| |||| ||||| |||||| ||| GACGATCCTA CAAGCACATT TACTTGCCCT GGTGGTAGTA CAAACTATAG GGTTGTCTTT 480 TGTCCTAATG GTGTTACTAG CCCAAATTTC CCCTTGGAGA TGCCCTCAAG ---TGATGAA 11386 |||||||||| ||||| || ||||||||| |||||||||| |||| |||| ||||||| TGTCCTAATG GTGTTGCTGA TCCAAATTTC CCCTTGGAGA TGCCTGCAAG TACTGATGAA 540 GAGGCTAAGT AAAATTGAGT CACTTTCTTT TAAATTGCTT GAAGTAGTCG AGTTATATAA 11326 | ||| |||| || |||||| ||| ||| ||||| || | || ||||| | | || | GTGGCCAAGT GAATTTGAGT TTCTTCATTT TAAATCGCCT CAATTAGTCA ACTGATCT.. 598 TTGGCTTGTA ATAAACCTAA TATAATTACA TGAATAAAAG TCACATCATC ACAAATATGT 11266 .......... .......... .......... .......... .......... .......... 598 TGTTTCGAAT ATTATTTTAT GTATATTTTG TTATTTACGT ATTAACTTGT CAAATAAAAG 11206 .......... .......... .......... .......... .......... .......... 598 AATAATATCA GTCAGTTTAA AAACATAAAA ACTATAATAT ACTGGATAAG ATAAATAAGA 11146 .......... .......... .......... .......... .......... .......... 598 ACATCTCACG AGATTATTTT ATCTCATTTT TTTATATGAT AAAAGTTCCA TCACAAAATA 11086 .......... .......... .......... .......... .......... .......... 598 TAAAAATAAA ATAAATTAAT CTCAAAAGTA ACTAGTACCT TAAAATAATA TAAAATAAAA 11026 .......... .......... .......... .......... .......... .......... 598 TAATCCCATT TTATTAGAAA TTATTATCCA CAATTTTAGG GCAAAGTCAA AAGTAGATGG 10966 .......... .......... .......... .......... .......... .......... 598 AAATATTTGT TTATAGGCGG CTCTTAGAAC ATTTTCAAGC TAAATGATGT TAGCTGCACG 10906 .......... .......... .......... .......... .......... .......... 598 TGCTACTTGA CACAATGCCA AAAGATTAAA TTGAGCAAAA TTTATATTTT TATTAAAAAA 10846 .......... .......... .......... .......... .......... .......... 598 AATTATATTT ATAAACGTAG AAAATTCACT ATTTTTTTTT TATCATTAAC ATGTTTTACA 10786 .......... .......... .......... .......... .......... .......... 598 TATTTTAGAG GATTAAGAGT GAAAAAGATT CTAATAACTT GTTAACTTGA TATAATAGAT 10726 .......... .......... .......... .......... .......... .......... 598 TAACAAGTTG ATTATATCGC ACTCTAAAGA ATAAAATGAA TTGTCAAAAA TAATATTAAT 10666 .......... .......... .......... .......... .......... .......... 598 AATTTATCGC CACTCAAAAA AATAAAAAAT ATTGTAGAAC GTGACTTTAT CAATACTAAT 10606 .......... .......... .......... .......... .......... .......... 598 CTCTTTTAAA ACAACGATTG ATTTGAACTT CACCGAAATT GATGGAATGA AATGACTAAA 10546 .......... .......... .......... .......... .......... .......... 598 TATTGTATTG GGATAAAATA ATGGGATAAT TGTATATAAT AGCAAACTAA TAACCTAAAA 10486 .......... .......... .......... .......... .......... .......... 598 TAAATGGAGT AGCTATGATT TGATTTAATT GTGCACCATA GCAAACGTTA GCCAAA 10430 | | ||| | ||| .......... .......... .......... .......... .CTACCGTAA TGAAAA 613 hqPGS_C08HBa0235H18.1-_SGN-E538599+ (11922 11328) ******************************************************************************** EST sequence 918 +strand 736 n (File: SGN-E353136+) 1 CACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT CAGACTGGTG ATTGTGGTGG 61 AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC CTAGCCGAGT ACGCCTTGGA 121 CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC GATGGATTTA ATATTCCAAT 181 GACTTTTGCC CCAACAAAAC CTAGTGGAGG AAAATGTCAC GCAATTCATT GCACGGCCAA 241 TATAAATGGT GAATGTCCTC GCGCCCTTAA GGTACCTGGA GGATGTAACA ACCCTTGTAC 301 CACGTTTGGA GGACAACAAT ATTGTTGCAC CCAAGGTCCA TGTGGCCCTA CAGAGTTGTC 361 CAAATTTTTC AAGAAAAGAT GTCCCGATGC TTATAGCTAC CCACAAGACG ATCCTACAAG 421 CACATTTACT TGCCCTGGTG GTAGTACAAA CTATAGGGTT GTCTTTTGTC CTAATGGTGT 481 TGCTGATCCA AATTTCCCCT TGGAGATGCC TGCAAGTACT GATGAAGTGG CCAAGTGAAT 541 TTGAGTTTCT TCATTTTAAA TCGCCTCAAT TAGTCAACTG ATCTCTACCG TAATGAAAAA 601 TCTTAATAGC TCAGTTTTTT AAATATTCAC TTTTACTTTA TTGATAAGAG TTCGTAACAA 661 ACTTAAAGAC CGGAATAAGA GTTACATCTC ATGTGTACTT TTGTCTTAGA TGTATAAAAC 721 AACAGTGCAT TTGAAA Predicted gene structure (within gDNA segment 13435 to 8529): Exon 1 11907 11328 ( 580 n); cDNA 2 584 ( 583 n); score: 0.868 Intron 1 11327 10445 ( 883 n); Pd: 0.000 (s: 0.72), Pa: 0.122 (s: 0) Exon 2 10444 10430 ( 15 n); cDNA 585 599 ( 15 n); score: 0.600 MATCH C08HBa0235H18.1- SGN-E353136+ 0.868 595 0.808 C PGS_C08HBa0235H18.1-_SGN-E353136+ (11907 11328,10444 10430) Alignment (genomic DNA sequence = upper lines): ACGAATTGCA ACTTTGATGG TGCTGGTAGA GGTTCATGTC AGACTGGTGA TTGTGGTGGG 11848 || ||||| ||||| ||| ||| || ||| ||| |||||| |||||||||| ||||||||| ACTGGTTGCA ACTTTAATGC TGCAGGCAGA GGTACATGTC AGACTGGTGA TTGTGGTGGA 61 GTCTTGCAAT GTACCGGGTG GGGCAAACCA CCAAACACCC TGGCCGAGTA CGCCTTGGAC 11788 ||||| || | ||||||| || ||||||||| |||||||||| | |||||||| |||||||||| GTCTTACAGT GTACCGGATG GGGCAAACCC CCAAACACCC TAGCCGAGTA CGCCTTGGAC 121 CAGTTTAGCA ACCTAGATTT CTGGGACATT TCTTTAGTCG ATGGATTTAA TATTCCAATG 11728 |||||||||| || ||||||| ||||||||| |||||||||| |||||||||| |||||||||| CAGTTTAGCA ACTTAGATTT TTGGGACATT TCTTTAGTCG ATGGATTTAA TATTCCAATG 181 ACTTTCGCCC CGACCAATCC TAGTGGAGGG AAATGCCATG CAATTCATTG TACGGCTAAT 11668 ||||| |||| | || || || ||||||||| ||||| || | |||||||||| ||||| ||| ACTTTTGCCC CAACAAAACC TAGTGGAGGA AAATGTCACG CAATTCATTG CACGGCCAAT 241 ATAAATGGTG AATGTCCTGG TTCACTTAGG GTACCCGGAG GATGTAACAA TCCTTGTACC 11608 |||||||||| |||||||| | | |||| | ||||| |||| |||||||||| ||||||||| ATAAATGGTG AATGTCCTCG CGCCCTTAAG GTACCTGGAG GATGTAACAA CCCTTGTACC 301 ACGTTCGGAG GACAACAATA TTGTTGCACA CAAGGTCCAT GTGGCCCTAC TGATTTGTCG 11548 ||||| |||| |||||||||| ||||||||| |||||||||| |||||||||| || ||||| ACGTTTGGAG GACAACAATA TTGTTGCACC CAAGGTCCAT GTGGCCCTAC AGAGTTGTCC 361 AGATTTTTCA AACAAAGATG TCCTGATGCG TATAGCTACC CACAAGATGA TCCTACTAGC 11488 | |||||||| | ||||||| ||| ||||| |||||||||| ||||||| || |||||| ||| AAATTTTTCA AGAAAAGATG TCCCGATGCT TATAGCTACC CACAAGACGA TCCTACAAGC 421 ACATTTACTT GCCCTAGTGG TAGTACAAAT TATAGGGTTG TTTTTTGTCC TAATGGTGTT 11428 |||||||||| ||||| |||| ||||||||| |||||||||| | |||||||| |||||||||| ACATTTACTT GCCCTGGTGG TAGTACAAAC TATAGGGTTG TCTTTTGTCC TAATGGTGTT 481 ACTAGCCCAA ATTTCCCCTT GGAGATGCCC TCAAG---TG ATGAAGAGGC TAAGTAAAAT 11371 || |||| |||||||||| ||||||||| |||| || |||||| ||| |||| || | GCTGATCCAA ATTTCCCCTT GGAGATGCCT GCAAGTACTG ATGAAGTGGC CAAGTGAATT 541 TGAGTCACTT TCTTTTAAAT TGCTTGAAGT AGTCGAGTTA TATAATTGGC TTGTAATAAA 11311 ||||| ||| |||||||| || | || | |||| | | | | | TGAGTTTCTT CATTTTAAAT CGCCTCAATT AGTCAACTGA TCT....... .......... 584 CCTAATATAA TTACATGAAT AAAAGTCACA TCATCACAAA TATGTTGTTT CGAATATTAT 11251 .......... .......... .......... .......... .......... .......... 584 TTTATGTATA TTTTGTTATT TACGTATTAA CTTGTCAAAT AAAAGAATAA TATCAGTCAG 11191 .......... .......... .......... .......... .......... .......... 584 TTTAAAAACA TAAAAACTAT AATATACTGG ATAAGATAAA TAAGAACATC TCACGAGATT 11131 .......... .......... .......... .......... .......... .......... 584 ATTTTATCTC ATTTTTTTAT ATGATAAAAG TTCCATCACA AAATATAAAA ATAAAATAAA 11071 .......... .......... .......... .......... .......... .......... 584 TTAATCTCAA AAGTAACTAG TACCTTAAAA TAATATAAAA TAAAATAATC CCATTTTATT 11011 .......... .......... .......... .......... .......... .......... 584 AGAAATTATT ATCCACAATT TTAGGGCAAA GTCAAAAGTA GATGGAAATA TTTGTTTATA 10951 .......... .......... .......... .......... .......... .......... 584 GGCGGCTCTT AGAACATTTT CAAGCTAAAT GATGTTAGCT GCACGTGCTA CTTGACACAA 10891 .......... .......... .......... .......... .......... .......... 584 TGCCAAAAGA TTAAATTGAG CAAAATTTAT ATTTTTATTA AAAAAAATTA TATTTATAAA 10831 .......... .......... .......... .......... .......... .......... 584 CGTAGAAAAT TCACTATTTT TTTTTTATCA TTAACATGTT TTACATATTT TAGAGGATTA 10771 .......... .......... .......... .......... .......... .......... 584 AGAGTGAAAA AGATTCTAAT AACTTGTTAA CTTGATATAA TAGATTAACA AGTTGATTAT 10711 .......... .......... .......... .......... .......... .......... 584 ATCGCACTCT AAAGAATAAA ATGAATTGTC AAAAATAATA TTAATAATTT ATCGCCACTC 10651 .......... .......... .......... .......... .......... .......... 584 AAAAAAATAA AAAATATTGT AGAACGTGAC TTTATCAATA CTAATCTCTT TTAAAACAAC 10591 .......... .......... .......... .......... .......... .......... 584 GATTGATTTG AACTTCACCG AAATTGATGG AATGAAATGA CTAAATATTG TATTGGGATA 10531 .......... .......... .......... .......... .......... .......... 584 AAATAATGGG ATAATTGTAT ATAATAGCAA ACTAATAACC TAAAATAAAT GGAGTAGCTA 10471 .......... .......... .......... .......... .......... .......... 584 TGATTTGATT TAATTGTGCA CCATAGCAAA CGTTAGCCAA A 10430 | | ||| | || | .......... .......... ......CTAC CGTAATGAAA A 599 hqPGS_C08HBa0235H18.1-_SGN-E353136+ (11907 11328) ******************************************************************************** EST sequence 964 +strand 652 n (File: SGN-E276802+) 1 CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC 61 CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC 121 GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG AAAATGTCAC 181 GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA GGTACCTGGA 241 GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC CCAAGGTCCA 301 TGTGGCCCTA CAGAGTTGTC CAAATTTTTC AAGAAAAGAT GTCCCGATGC TTATAGCTAC 361 CCACAAGACG ATCCTACAAG CACATTTACT TGCCCTGGTG GTAGTACAAA CTATAGGGTT 421 GTCTTTTGTC CTAATGGTGT TGCTGATCCA AATTTCCCCT TGGAGATGCC TGCAAGTACT 481 GATGAAGTGG CCAAGTGAAT TTGAGTTTCT TCATTTTAAA TCGCCTCAAT TAGTCAACTG 541 ATCTCTACCG TAATGAAAAA TCTTAATAGC TCAGTTTTTT AAATATTCAC TTTTACTTTA 601 TTGATAAGAG TTCGTAACAA ACTTAAAGAC CGGAATAAGA GTTACATCTC AT Predicted gene structure (within gDNA segment 13035 to 8969): Exon 1 11868 11328 ( 541 n); cDNA 1 544 ( 544 n); score: 0.873 Intron 1 11327 10445 ( 883 n); Pd: 0.000 (s: 0.72), Pa: 0.122 (s: 0) Exon 2 10444 10430 ( 15 n); cDNA 545 559 ( 15 n); score: 0.600 MATCH C08HBa0235H18.1- SGN-E276802+ 0.873 556 0.853 C PGS_C08HBa0235H18.1-_SGN-E276802+ (11868 11328,10444 10430) Alignment (genomic DNA sequence = upper lines): CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC ACCAAACACC 11809 |||||||||| |||||||||| ||||| || |||||||| | |||||||||| ||||||||| CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC 60 CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT TTCTTTAGTC 11749 || ||||||| |||||||||| |||||||||| ||| |||||| | |||||||| |||||||||| CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC 120 GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG GAAATGCCAT 11689 |||||||||| |||||||||| |||||| ||| || || || | |||||||||| ||||| || GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG AAAATGTCAC 180 GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG GGTACCCGGA 11629 |||||||||| | ||||| || |||||||||| ||||||||| | | |||| |||||| ||| GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA GGTACCTGGA 240 GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT ATTGTTGCAC ACAAGGTCCA 11569 |||||||||| | |||||||| |||||| ||| |||||||||| |||||||||| ||||||||| GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC CCAAGGTCCA 300 TGTGGCCCTA CTGATTTGTC GAGATTTTTC AAACAAAGAT GTCCTGATGC GTATAGCTAC 11509 |||||||||| | || ||||| | ||||||| || |||||| |||| ||||| ||||||||| TGTGGCCCTA CAGAGTTGTC CAAATTTTTC AAGAAAAGAT GTCCCGATGC TTATAGCTAC 360 CCACAAGATG ATCCTACTAG CACATTTACT TGCCCTAGTG GTAGTACAAA TTATAGGGTT 11449 |||||||| | ||||||| || |||||||||| |||||| ||| |||||||||| ||||||||| CCACAAGACG ATCCTACAAG CACATTTACT TGCCCTGGTG GTAGTACAAA CTATAGGGTT 420 GTTTTTTGTC CTAATGGTGT TACTAGCCCA AATTTCCCCT TGGAGATGCC CTCAAG---T 11392 || ||||||| |||||||||| | || ||| |||||||||| |||||||||| |||| | GTCTTTTGTC CTAATGGTGT TGCTGATCCA AATTTCCCCT TGGAGATGCC TGCAAGTACT 480 GATGAAGAGG CTAAGTAAAA TTGAGTCACT TTCTTTTAAA TTGCTTGAAG TAGTCGAGTT 11332 ||||||| || | |||| || |||||| || | ||||||| | || | || ||||| | | GATGAAGTGG CCAAGTGAAT TTGAGTTTCT TCATTTTAAA TCGCCTCAAT TAGTCAACTG 540 ATATAATTGG CTTGTAATAA ACCTAATATA ATTACATGAA TAAAAGTCAC ATCATCACAA 11272 || | ATCT...... .......... .......... .......... .......... .......... 544 ATATGTTGTT TCGAATATTA TTTTATGTAT ATTTTGTTAT TTACGTATTA ACTTGTCAAA 11212 .......... .......... .......... .......... .......... .......... 544 TAAAAGAATA ATATCAGTCA GTTTAAAAAC ATAAAAACTA TAATATACTG GATAAGATAA 11152 .......... .......... .......... .......... .......... .......... 544 ATAAGAACAT CTCACGAGAT TATTTTATCT CATTTTTTTA TATGATAAAA GTTCCATCAC 11092 .......... .......... .......... .......... .......... .......... 544 AAAATATAAA AATAAAATAA ATTAATCTCA AAAGTAACTA GTACCTTAAA ATAATATAAA 11032 .......... .......... .......... .......... .......... .......... 544 ATAAAATAAT CCCATTTTAT TAGAAATTAT TATCCACAAT TTTAGGGCAA AGTCAAAAGT 10972 .......... .......... .......... .......... .......... .......... 544 AGATGGAAAT ATTTGTTTAT AGGCGGCTCT TAGAACATTT TCAAGCTAAA TGATGTTAGC 10912 .......... .......... .......... .......... .......... .......... 544 TGCACGTGCT ACTTGACACA ATGCCAAAAG ATTAAATTGA GCAAAATTTA TATTTTTATT 10852 .......... .......... .......... .......... .......... .......... 544 AAAAAAAATT ATATTTATAA ACGTAGAAAA TTCACTATTT TTTTTTTATC ATTAACATGT 10792 .......... .......... .......... .......... .......... .......... 544 TTTACATATT TTAGAGGATT AAGAGTGAAA AAGATTCTAA TAACTTGTTA ACTTGATATA 10732 .......... .......... .......... .......... .......... .......... 544 ATAGATTAAC AAGTTGATTA TATCGCACTC TAAAGAATAA AATGAATTGT CAAAAATAAT 10672 .......... .......... .......... .......... .......... .......... 544 ATTAATAATT TATCGCCACT CAAAAAAATA AAAAATATTG TAGAACGTGA CTTTATCAAT 10612 .......... .......... .......... .......... .......... .......... 544 ACTAATCTCT TTTAAAACAA CGATTGATTT GAACTTCACC GAAATTGATG GAATGAAATG 10552 .......... .......... .......... .......... .......... .......... 544 ACTAAATATT GTATTGGGAT AAAATAATGG GATAATTGTA TATAATAGCA AACTAATAAC 10492 .......... .......... .......... .......... .......... .......... 544 CTAAAATAAA TGGAGTAGCT ATGATTTGAT TTAATTGTGC ACCATAGCAA ACGTTAGCCA 10432 | | ||| | | .......... .......... .......... .......... .......CTA CCGTAATGAA 557 AA 10430 || AA 559 hqPGS_C08HBa0235H18.1-_SGN-E276802+ (11868 11328) ******************************************************************************** EST sequence 1182 +strand 679 n (File: SGN-E357805+) 1 TCTTACAGTG TACCGGATGG GGCAAACCCC CAAACACCCT AGCCGAGTAC GCCTTGGACC 61 AGTTTAGCAA CTTAGATTTT TGGGACATTT CTTTAGTCGA TGGATTTAAT ATTCCAATGA 121 CTTTTGCCCC AACAAAACCT AGTGGAGGAA AATGTCACGC AATTCATTGC ACGGCCAATA 181 TAAATGGTGA ATGTCCTCGC GCCCTTAAGG TACCTGGAGG ATGTAACAAC CCTTGTACCA 241 CGTTTGGAGG ACAACAATAT TGTTGCACCC AAGGTCCATG TGGCCCTACA GAGTTGTCCA 301 AATTTTTCAA GAAAAGATGT CCCGATGCTT ATAGCTACCC ACAAGACGAT CCTACAAGCA 361 CATTTACTTG CCCTGGTGGT AGTACAAACT ATAGGGTTGT CTTTTGTCCT AATGGTGTTG 421 CTGATCCAAA TTTCCCCTTG GAGATGCCTG CAAGTACTGA TGAAGTGGCC AAGTGAATTT 481 GAGTTTCTTC ATTTTAAATC GCCTCAATTA GTCAACTGAT CTCTACCGTA ATGAAAAATC 541 TTAATAGCTC AGTTTTTTAA ATATTCACTT TTACTTTATT GATAAGAAGT CGTAACAAAC 601 TTAAAGACCG GAATAAAGAG TACATCTCAT GTGTACTTTT GTCTTAGATG TATAAAACAC 661 AGTGCATTTG AAAAAAAAA Predicted gene structure (within gDNA segment 12815 to 8479): Exon 1 11846 11328 ( 519 n); cDNA 1 522 ( 522 n); score: 0.870 Intron 1 11327 10445 ( 883 n); Pd: 0.000 (s: 0.72), Pa: 0.122 (s: 0) Exon 2 10444 10430 ( 15 n); cDNA 523 537 ( 15 n); score: 0.600 MATCH C08HBa0235H18.1- SGN-E357805+ 0.870 534 0.786 C PGS_C08HBa0235H18.1-_SGN-E357805+ (11846 11328,10444 10430) Alignment (genomic DNA sequence = upper lines): TCTTGCAATG TACCGGGTGG GGCAAACCAC CAAACACCCT GGCCGAGTAC GCCTTGGACC 11787 |||| || || |||||| ||| |||||||| | |||||||||| ||||||||| |||||||||| TCTTACAGTG TACCGGATGG GGCAAACCCC CAAACACCCT AGCCGAGTAC GCCTTGGACC 60 AGTTTAGCAA CCTAGATTTC TGGGACATTT CTTTAGTCGA TGGATTTAAT ATTCCAATGA 11727 |||||||||| | ||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTTAGCAA CTTAGATTTT TGGGACATTT CTTTAGTCGA TGGATTTAAT ATTCCAATGA 120 CTTTCGCCCC GACCAATCCT AGTGGAGGGA AATGCCATGC AATTCATTGT ACGGCTAATA 11667 |||| ||||| || || ||| |||||||| | |||| || || ||||||||| ||||| |||| CTTTTGCCCC AACAAAACCT AGTGGAGGAA AATGTCACGC AATTCATTGC ACGGCCAATA 180 TAAATGGTGA ATGTCCTGGT TCACTTAGGG TACCCGGAGG ATGTAACAAT CCTTGTACCA 11607 |||||||||| ||||||| | | |||| || |||| ||||| ||||||||| |||||||||| TAAATGGTGA ATGTCCTCGC GCCCTTAAGG TACCTGGAGG ATGTAACAAC CCTTGTACCA 240 CGTTCGGAGG ACAACAATAT TGTTGCACAC AAGGTCCATG TGGCCCTACT GATTTGTCGA 11547 |||| ||||| |||||||||| |||||||| | |||||||||| ||||||||| || ||||| | CGTTTGGAGG ACAACAATAT TGTTGCACCC AAGGTCCATG TGGCCCTACA GAGTTGTCCA 300 GATTTTTCAA ACAAAGATGT CCTGATGCGT ATAGCTACCC ACAAGATGAT CCTACTAGCA 11487 ||||||||| |||||||| || ||||| | |||||||||| |||||| ||| ||||| |||| AATTTTTCAA GAAAAGATGT CCCGATGCTT ATAGCTACCC ACAAGACGAT CCTACAAGCA 360 CATTTACTTG CCCTAGTGGT AGTACAAATT ATAGGGTTGT TTTTTGTCCT AATGGTGTTA 11427 |||||||||| |||| ||||| |||||||| | |||||||||| ||||||||| ||||||||| CATTTACTTG CCCTGGTGGT AGTACAAACT ATAGGGTTGT CTTTTGTCCT AATGGTGTTG 420 CTAGCCCAAA TTTCCCCTTG GAGATGCCCT CAAG---TGA TGAAGAGGCT AAGTAAAATT 11370 || ||||| |||||||||| |||||||| |||| ||| ||||| ||| |||| || || CTGATCCAAA TTTCCCCTTG GAGATGCCTG CAAGTACTGA TGAAGTGGCC AAGTGAATTT 480 GAGTCACTTT CTTTTAAATT GCTTGAAGTA GTCGAGTTAT ATAATTGGCT TGTAATAAAC 11310 |||| ||| |||||||| || | || || ||| | | || | GAGTTTCTTC ATTTTAAATC GCCTCAATTA GTCAACTGAT CT........ .......... 522 CTAATATAAT TACATGAATA AAAGTCACAT CATCACAAAT ATGTTGTTTC GAATATTATT 11250 .......... .......... .......... .......... .......... .......... 522 TTATGTATAT TTTGTTATTT ACGTATTAAC TTGTCAAATA AAAGAATAAT ATCAGTCAGT 11190 .......... .......... .......... .......... .......... .......... 522 TTAAAAACAT AAAAACTATA ATATACTGGA TAAGATAAAT AAGAACATCT CACGAGATTA 11130 .......... .......... .......... .......... .......... .......... 522 TTTTATCTCA TTTTTTTATA TGATAAAAGT TCCATCACAA AATATAAAAA TAAAATAAAT 11070 .......... .......... .......... .......... .......... .......... 522 TAATCTCAAA AGTAACTAGT ACCTTAAAAT AATATAAAAT AAAATAATCC CATTTTATTA 11010 .......... .......... .......... .......... .......... .......... 522 GAAATTATTA TCCACAATTT TAGGGCAAAG TCAAAAGTAG ATGGAAATAT TTGTTTATAG 10950 .......... .......... .......... .......... .......... .......... 522 GCGGCTCTTA GAACATTTTC AAGCTAAATG ATGTTAGCTG CACGTGCTAC TTGACACAAT 10890 .......... .......... .......... .......... .......... .......... 522 GCCAAAAGAT TAAATTGAGC AAAATTTATA TTTTTATTAA AAAAAATTAT ATTTATAAAC 10830 .......... .......... .......... .......... .......... .......... 522 GTAGAAAATT CACTATTTTT TTTTTATCAT TAACATGTTT TACATATTTT AGAGGATTAA 10770 .......... .......... .......... .......... .......... .......... 522 GAGTGAAAAA GATTCTAATA ACTTGTTAAC TTGATATAAT AGATTAACAA GTTGATTATA 10710 .......... .......... .......... .......... .......... .......... 522 TCGCACTCTA AAGAATAAAA TGAATTGTCA AAAATAATAT TAATAATTTA TCGCCACTCA 10650 .......... .......... .......... .......... .......... .......... 522 AAAAAATAAA AAATATTGTA GAACGTGACT TTATCAATAC TAATCTCTTT TAAAACAACG 10590 .......... .......... .......... .......... .......... .......... 522 ATTGATTTGA ACTTCACCGA AATTGATGGA ATGAAATGAC TAAATATTGT ATTGGGATAA 10530 .......... .......... .......... .......... .......... .......... 522 AATAATGGGA TAATTGTATA TAATAGCAAA CTAATAACCT AAAATAAATG GAGTAGCTAT 10470 .......... .......... .......... .......... .......... .......... 522 GATTTGATTT AATTGTGCAC CATAGCAAAC GTTAGCCAAA 10430 | | | || | ||| .......... .......... .....CTACC GTAATGAAAA 537 hqPGS_C08HBa0235H18.1-_SGN-E357805+ (11846 11328) ******************************************************************************** EST sequence 1142 +strand 620 n (File: SGN-E357453+) 1 GCAAACCCCC AAACACCCTA GCCGAGTACG CCTTGGACCA GTTTAGCAAC TTAGATTTTT 61 GGGACATTTC TTTAGTCGAT GGATTTAATA TTCCAATGAC TTTTGCCCCA ACAAAACCTA 121 GTGGAGGAAA ATGTCACGCA ATTCATTGCA CGGCCAATAT AAATGGTGAA TGTCCTCGCG 181 CCCTTAAGGT ACCTGGAGGA TGTAACAACC CTTGTACCAC GTTTGGAGGA CAACAATATT 241 GTTGCACCCA AGGTCCATGT GGCCCTACAG AGTTGTCCAA ATTTTTCAAG AAAAGATGTC 301 CCGATGCTTA TAGCTACCCA CAAGACGATC CTACAAGCAC ATTTACTTGC CCTGGTGGTA 361 GTACAAACTA TAGGGTTGTC TTTTGTCCTA ATGGTGTTGC TGATCCAAAT TTCCCCTTGG 421 AGATGCCTGC AAGTACTGAT GAAGTGGCCA AGTGAATTTG AGTTTCTTCA TTTTAAATCG 481 CCTCAATTAG TCAACTGATC TCTACCGTAA TGAAAAATCT TAATAGCTCA GTTTTTTAAA 541 TATTCACTTT TACTTTATTG ATAAGAGTTC GTAACAAACT TAAAGACCGG AATAAGAGTT 601 ACATCTCAAA AAAAAAAAAA Predicted gene structure (within gDNA segment 12605 to 8859): Exon 1 11825 11328 ( 498 n); cDNA 1 501 ( 501 n); score: 0.870 Intron 1 11327 10445 ( 883 n); Pd: 0.000 (s: 0.72), Pa: 0.122 (s: 0) Exon 2 10444 10430 ( 15 n); cDNA 502 516 ( 15 n); score: 0.600 PPA cDNA 608 620 MATCH C08HBa0235H18.1- SGN-E357453+ 0.870 513 0.827 C PGS_C08HBa0235H18.1-_SGN-E357453+ (11825 11328,10444 10430) Alignment (genomic DNA sequence = upper lines): GCAAACCACC AAACACCCTG GCCGAGTACG CCTTGGACCA GTTTAGCAAC CTAGATTTCT 11766 ||||||| || ||||||||| |||||||||| |||||||||| |||||||||| ||||||| | GCAAACCCCC AAACACCCTA GCCGAGTACG CCTTGGACCA GTTTAGCAAC TTAGATTTTT 60 GGGACATTTC TTTAGTCGAT GGATTTAATA TTCCAATGAC TTTCGCCCCG ACCAATCCTA 11706 |||||||||| |||||||||| |||||||||| |||||||||| ||| ||||| || || |||| GGGACATTTC TTTAGTCGAT GGATTTAATA TTCCAATGAC TTTTGCCCCA ACAAAACCTA 120 GTGGAGGGAA ATGCCATGCA ATTCATTGTA CGGCTAATAT AAATGGTGAA TGTCCTGGTT 11646 ||||||| || ||| || ||| |||||||| | |||| ||||| |||||||||| |||||| | GTGGAGGAAA ATGTCACGCA ATTCATTGCA CGGCCAATAT AAATGGTGAA TGTCCTCGCG 180 CACTTAGGGT ACCCGGAGGA TGTAACAATC CTTGTACCAC GTTCGGAGGA CAACAATATT 11586 | |||| ||| ||| |||||| |||||||| | |||||||||| ||| |||||| |||||||||| CCCTTAAGGT ACCTGGAGGA TGTAACAACC CTTGTACCAC GTTTGGAGGA CAACAATATT 240 GTTGCACACA AGGTCCATGT GGCCCTACTG ATTTGTCGAG ATTTTTCAAA CAAAGATGTC 11526 ||||||| || |||||||||| |||||||| | | ||||| | ||||||||| ||||||||| GTTGCACCCA AGGTCCATGT GGCCCTACAG AGTTGTCCAA ATTTTTCAAG AAAAGATGTC 300 CTGATGCGTA TAGCTACCCA CAAGATGATC CTACTAGCAC ATTTACTTGC CCTAGTGGTA 11466 | ||||| || |||||||||| ||||| |||| |||| ||||| |||||||||| ||| |||||| CCGATGCTTA TAGCTACCCA CAAGACGATC CTACAAGCAC ATTTACTTGC CCTGGTGGTA 360 GTACAAATTA TAGGGTTGTT TTTTGTCCTA ATGGTGTTAC TAGCCCAAAT TTCCCCTTGG 11406 ||||||| || ||||||||| |||||||||| |||||||| | | |||||| |||||||||| GTACAAACTA TAGGGTTGTC TTTTGTCCTA ATGGTGTTGC TGATCCAAAT TTCCCCTTGG 420 AGATGCCCTC AAG---TGAT GAAGAGGCTA AGTAAAATTG AGTCACTTTC TTTTAAATTG 11349 ||||||| | ||| |||| |||| ||| | ||| || ||| ||| ||| |||||||| | AGATGCCTGC AAGTACTGAT GAAGTGGCCA AGTGAATTTG AGTTTCTTCA TTTTAAATCG 480 CTTGAAGTAG TCGAGTTATA TAATTGGCTT GTAATAAACC TAATATAATT ACATGAATAA 11289 | | || ||| || | | || | CCTCAATTAG TCAACTGATC T......... .......... .......... .......... 501 AAGTCACATC ATCACAAATA TGTTGTTTCG AATATTATTT TATGTATATT TTGTTATTTA 11229 .......... .......... .......... .......... .......... .......... 501 CGTATTAACT TGTCAAATAA AAGAATAATA TCAGTCAGTT TAAAAACATA AAAACTATAA 11169 .......... .......... .......... .......... .......... .......... 501 TATACTGGAT AAGATAAATA AGAACATCTC ACGAGATTAT TTTATCTCAT TTTTTTATAT 11109 .......... .......... .......... .......... .......... .......... 501 GATAAAAGTT CCATCACAAA ATATAAAAAT AAAATAAATT AATCTCAAAA GTAACTAGTA 11049 .......... .......... .......... .......... .......... .......... 501 CCTTAAAATA ATATAAAATA AAATAATCCC ATTTTATTAG AAATTATTAT CCACAATTTT 10989 .......... .......... .......... .......... .......... .......... 501 AGGGCAAAGT CAAAAGTAGA TGGAAATATT TGTTTATAGG CGGCTCTTAG AACATTTTCA 10929 .......... .......... .......... .......... .......... .......... 501 AGCTAAATGA TGTTAGCTGC ACGTGCTACT TGACACAATG CCAAAAGATT AAATTGAGCA 10869 .......... .......... .......... .......... .......... .......... 501 AAATTTATAT TTTTATTAAA AAAAATTATA TTTATAAACG TAGAAAATTC ACTATTTTTT 10809 .......... .......... .......... .......... .......... .......... 501 TTTTATCATT AACATGTTTT ACATATTTTA GAGGATTAAG AGTGAAAAAG ATTCTAATAA 10749 .......... .......... .......... .......... .......... .......... 501 CTTGTTAACT TGATATAATA GATTAACAAG TTGATTATAT CGCACTCTAA AGAATAAAAT 10689 .......... .......... .......... .......... .......... .......... 501 GAATTGTCAA AAATAATATT AATAATTTAT CGCCACTCAA AAAAATAAAA AATATTGTAG 10629 .......... .......... .......... .......... .......... .......... 501 AACGTGACTT TATCAATACT AATCTCTTTT AAAACAACGA TTGATTTGAA CTTCACCGAA 10569 .......... .......... .......... .......... .......... .......... 501 ATTGATGGAA TGAAATGACT AAATATTGTA TTGGGATAAA ATAATGGGAT AATTGTATAT 10509 .......... .......... .......... .......... .......... .......... 501 AATAGCAAAC TAATAACCTA AAATAAATGG AGTAGCTATG ATTTGATTTA ATTGTGCACC 10449 .......... .......... .......... .......... .......... .......... 501 ATAGCAAACG TTAGCCAAA 10430 | | || | | ||| ....CTACCG TAATGAAAA 516 hqPGS_C08HBa0235H18.1-_SGN-E357453+ (11825 11328) ******************************************************************************** EST sequence 815 +strand 615 n (File: SGN-E353799+) 1 CCAAACACCC TAGCCGAGTA CGCCTTGGAC CAGTTTAGCA ACTTAGATTT TTGGGACATT 61 TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTTGCCC CAACAAAACC TAGTGGAGGA 121 AAATGTCACG CAATTCATTG CACGGCCAAT ATAAATGGTG AATGTCCTCG CGCCCTTAAG 181 GTACCTGGAG GATGTAACAA CCCTTGTACC ACGTTTGGAG GACAACAATA TTGTTGCACC 241 CAAGGTCCAT GTGGCCCTAC AGAGTTGTCC AAATTTTTCA AGAAAAGATG TCCCGATGCT 301 TATAGCTACC CACAAGACGA TCCTACAAGC ACATTTACTT GCCCTGGTGG TAGTACAAAC 361 TATAGGGTTG TCTTTTGTCC TAATGGTGTT GCTGATCCAA ATTTCCCCTT GGAGATGCCT 421 GCAAGTACTG ATGAAGTGGC CAAGTGAATT TGAGTTTCTT CATTTTAAAT CGCCTCAATT 481 AGTCAACTGA TCTCTACCGT AATGAAAAAT CTTAATAGCT CAGTTTTTTA AATATTCACT 541 TTTACTTTAT TGATAAGAGT TCGTAACAAA CTTAAAGACC GGAATAAGAG TTACATCTCA 601 TGTGAAAAAA AAAAA Predicted gene structure (within gDNA segment 12525 to 8829): Exon 1 11817 11328 ( 490 n); cDNA 1 493 ( 493 n); score: 0.870 Intron 1 11327 10445 ( 883 n); Pd: 0.000 (s: 0.72), Pa: 0.122 (s: 0) Exon 2 10444 10430 ( 15 n); cDNA 494 508 ( 15 n); score: 0.600 PPA cDNA 605 615 MATCH C08HBa0235H18.1- SGN-E353799+ 0.870 505 0.821 C PGS_C08HBa0235H18.1-_SGN-E353799+ (11817 11328,10444 10430) Alignment (genomic DNA sequence = upper lines): CCAAACACCC TGGCCGAGTA CGCCTTGGAC CAGTTTAGCA ACCTAGATTT CTGGGACATT 11758 |||||||||| | |||||||| |||||||||| |||||||||| || ||||||| ||||||||| CCAAACACCC TAGCCGAGTA CGCCTTGGAC CAGTTTAGCA ACTTAGATTT TTGGGACATT 60 TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTCGCCC CGACCAATCC TAGTGGAGGG 11698 |||||||||| |||||||||| |||||||||| ||||| |||| | || || || ||||||||| TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTTGCCC CAACAAAACC TAGTGGAGGA 120 AAATGCCATG CAATTCATTG TACGGCTAAT ATAAATGGTG AATGTCCTGG TTCACTTAGG 11638 ||||| || | |||||||||| ||||| ||| |||||||||| |||||||| | | |||| | AAATGTCACG CAATTCATTG CACGGCCAAT ATAAATGGTG AATGTCCTCG CGCCCTTAAG 180 GTACCCGGAG GATGTAACAA TCCTTGTACC ACGTTCGGAG GACAACAATA TTGTTGCACA 11578 ||||| |||| |||||||||| ||||||||| ||||| |||| |||||||||| ||||||||| GTACCTGGAG GATGTAACAA CCCTTGTACC ACGTTTGGAG GACAACAATA TTGTTGCACC 240 CAAGGTCCAT GTGGCCCTAC TGATTTGTCG AGATTTTTCA AACAAAGATG TCCTGATGCG 11518 |||||||||| |||||||||| || ||||| | |||||||| | ||||||| ||| ||||| CAAGGTCCAT GTGGCCCTAC AGAGTTGTCC AAATTTTTCA AGAAAAGATG TCCCGATGCT 300 TATAGCTACC CACAAGATGA TCCTACTAGC ACATTTACTT GCCCTAGTGG TAGTACAAAT 11458 |||||||||| ||||||| || |||||| ||| |||||||||| ||||| |||| ||||||||| TATAGCTACC CACAAGACGA TCCTACAAGC ACATTTACTT GCCCTGGTGG TAGTACAAAC 360 TATAGGGTTG TTTTTTGTCC TAATGGTGTT ACTAGCCCAA ATTTCCCCTT GGAGATGCCC 11398 |||||||||| | |||||||| |||||||||| || |||| |||||||||| ||||||||| TATAGGGTTG TCTTTTGTCC TAATGGTGTT GCTGATCCAA ATTTCCCCTT GGAGATGCCT 420 TCAAG---TG ATGAAGAGGC TAAGTAAAAT TGAGTCACTT TCTTTTAAAT TGCTTGAAGT 11341 |||| || |||||| ||| |||| || | ||||| ||| |||||||| || | || | GCAAGTACTG ATGAAGTGGC CAAGTGAATT TGAGTTTCTT CATTTTAAAT CGCCTCAATT 480 AGTCGAGTTA TATAATTGGC TTGTAATAAA CCTAATATAA TTACATGAAT AAAAGTCACA 11281 |||| | | | | | AGTCAACTGA TCT....... .......... .......... .......... .......... 493 TCATCACAAA TATGTTGTTT CGAATATTAT TTTATGTATA TTTTGTTATT TACGTATTAA 11221 .......... .......... .......... .......... .......... .......... 493 CTTGTCAAAT AAAAGAATAA TATCAGTCAG TTTAAAAACA TAAAAACTAT AATATACTGG 11161 .......... .......... .......... .......... .......... .......... 493 ATAAGATAAA TAAGAACATC TCACGAGATT ATTTTATCTC ATTTTTTTAT ATGATAAAAG 11101 .......... .......... .......... .......... .......... .......... 493 TTCCATCACA AAATATAAAA ATAAAATAAA TTAATCTCAA AAGTAACTAG TACCTTAAAA 11041 .......... .......... .......... .......... .......... .......... 493 TAATATAAAA TAAAATAATC CCATTTTATT AGAAATTATT ATCCACAATT TTAGGGCAAA 10981 .......... .......... .......... .......... .......... .......... 493 GTCAAAAGTA GATGGAAATA TTTGTTTATA GGCGGCTCTT AGAACATTTT CAAGCTAAAT 10921 .......... .......... .......... .......... .......... .......... 493 GATGTTAGCT GCACGTGCTA CTTGACACAA TGCCAAAAGA TTAAATTGAG CAAAATTTAT 10861 .......... .......... .......... .......... .......... .......... 493 ATTTTTATTA AAAAAAATTA TATTTATAAA CGTAGAAAAT TCACTATTTT TTTTTTATCA 10801 .......... .......... .......... .......... .......... .......... 493 TTAACATGTT TTACATATTT TAGAGGATTA AGAGTGAAAA AGATTCTAAT AACTTGTTAA 10741 .......... .......... .......... .......... .......... .......... 493 CTTGATATAA TAGATTAACA AGTTGATTAT ATCGCACTCT AAAGAATAAA ATGAATTGTC 10681 .......... .......... .......... .......... .......... .......... 493 AAAAATAATA TTAATAATTT ATCGCCACTC AAAAAAATAA AAAATATTGT AGAACGTGAC 10621 .......... .......... .......... .......... .......... .......... 493 TTTATCAATA CTAATCTCTT TTAAAACAAC GATTGATTTG AACTTCACCG AAATTGATGG 10561 .......... .......... .......... .......... .......... .......... 493 AATGAAATGA CTAAATATTG TATTGGGATA AAATAATGGG ATAATTGTAT ATAATAGCAA 10501 .......... .......... .......... .......... .......... .......... 493 ACTAATAACC TAAAATAAAT GGAGTAGCTA TGATTTGATT TAATTGTGCA CCATAGCAAA 10441 | | .......... .......... .......... .......... .......... ......CTAC 497 CGTTAGCCAA A 10430 ||| | || | CGTAATGAAA A 508 hqPGS_C08HBa0235H18.1-_SGN-E353799+ (11817 11328) ******************************************************************************** EST sequence 80 -strand 606 n (File: SGN-E263405-) 1 AGTACGCCTT GGACCAGTTT AGCAACTTAG ATTTTTGGGA CATTTCTTTA GTCGATGGAT 61 TTAATATTCC AATGACTTTT GCCCCAACAA AACCTAGTGG AGGAAAATGT CACGCAATTC 121 ATTGCACGGC CAATATAAAT GGTGAATGTC CTCGCGCCCT TAAGGTACCT GGAGGATGTA 181 ACAACCCTTG TACCACGTTT GGAGGACAAC AATATTGTTG CACCCAAGGT CCATGTGGCC 241 CTACAGAGTT GTCCAAATTT TTCAAGAAAA GATGTCCCGA TGCTTATAGC TACCCACAAG 301 ACGATCCTAC AAGCACATTT ACTTGCCCTG GTGGTAGTAC AAACTATAGG GTTGTCTTTT 361 GTCCTAATGG TGTTGCTGAT CCAAATTTCC CCTTGGAGAT GCCTGCAAGT ACTGATGAAG 421 TGGCCAAGTG AATTTGAGTT TCTTCATTTT AAATCGCCTC AATTAGTCAA CTGATCTCTA 481 CCGTAATGAA AAATCTTAAT AGCTCAGTTT TTTAAATATT CACTTTTACT TTATTGATAA 541 GAGTTCGTAA CAAACTTAAA GACCGGAATA AGAGTTACAT CTCATGTGTA AAAAAAAAAA 601 AAAAAA Predicted gene structure (within gDNA segment 12411 to 8769): Exon 1 11801 11328 ( 474 n); cDNA 1 477 ( 477 n); score: 0.868 Intron 1 11327 10445 ( 883 n); Pd: 0.000 (s: 0.72), Pa: 0.122 (s: 0) Exon 2 10444 10430 ( 15 n); cDNA 478 492 ( 15 n); score: 0.600 PPA cDNA 590 606 MATCH C08HBa0235H18.1- SGN-E263405- 0.868 489 0.807 C PGS_C08HBa0235H18.1-_SGN-E263405- (11801 11328,10444 10430) Alignment (genomic DNA sequence = upper lines): AGTACGCCTT GGACCAGTTT AGCAACCTAG ATTTCTGGGA CATTTCTTTA GTCGATGGAT 11742 |||||||||| |||||||||| |||||| ||| |||| ||||| |||||||||| |||||||||| AGTACGCCTT GGACCAGTTT AGCAACTTAG ATTTTTGGGA CATTTCTTTA GTCGATGGAT 60 TTAATATTCC AATGACTTTC GCCCCGACCA ATCCTAGTGG AGGGAAATGC CATGCAATTC 11682 |||||||||| ||||||||| ||||| || | | |||||||| ||| ||||| || ||||||| TTAATATTCC AATGACTTTT GCCCCAACAA AACCTAGTGG AGGAAAATGT CACGCAATTC 120 ATTGTACGGC TAATATAAAT GGTGAATGTC CTGGTTCACT TAGGGTACCC GGAGGATGTA 11622 |||| ||||| ||||||||| |||||||||| || | | || || |||||| |||||||||| ATTGCACGGC CAATATAAAT GGTGAATGTC CTCGCGCCCT TAAGGTACCT GGAGGATGTA 180 ACAATCCTTG TACCACGTTC GGAGGACAAC AATATTGTTG CACACAAGGT CCATGTGGCC 11562 |||| ||||| ||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| ACAACCCTTG TACCACGTTT GGAGGACAAC AATATTGTTG CACCCAAGGT CCATGTGGCC 240 CTACTGATTT GTCGAGATTT TTCAAACAAA GATGTCCTGA TGCGTATAGC TACCCACAAG 11502 |||| || || ||| | |||| ||||| ||| ||||||| || ||| |||||| |||||||||| CTACAGAGTT GTCCAAATTT TTCAAGAAAA GATGTCCCGA TGCTTATAGC TACCCACAAG 300 ATGATCCTAC TAGCACATTT ACTTGCCCTA GTGGTAGTAC AAATTATAGG GTTGTTTTTT 11442 | |||||||| ||||||||| ||||||||| |||||||||| ||| |||||| ||||| |||| ACGATCCTAC AAGCACATTT ACTTGCCCTG GTGGTAGTAC AAACTATAGG GTTGTCTTTT 360 GTCCTAATGG TGTTACTAGC CCAAATTTCC CCTTGGAGAT GCCCTCAAG- --TGATGAAG 11385 |||||||||| |||| || |||||||||| |||||||||| ||| |||| |||||||| GTCCTAATGG TGTTGCTGAT CCAAATTTCC CCTTGGAGAT GCCTGCAAGT ACTGATGAAG 420 AGGCTAAGTA AAATTGAGTC ACTTTCTTTT AAATTGCTTG AAGTAGTCGA GTTATATAAT 11325 ||| |||| || |||||| ||| |||| |||| || | || ||||| | | || | TGGCCAAGTG AATTTGAGTT TCTTCATTTT AAATCGCCTC AATTAGTCAA CTGATCT... 477 TGGCTTGTAA TAAACCTAAT ATAATTACAT GAATAAAAGT CACATCATCA CAAATATGTT 11265 .......... .......... .......... .......... .......... .......... 477 GTTTCGAATA TTATTTTATG TATATTTTGT TATTTACGTA TTAACTTGTC AAATAAAAGA 11205 .......... .......... .......... .......... .......... .......... 477 ATAATATCAG TCAGTTTAAA AACATAAAAA CTATAATATA CTGGATAAGA TAAATAAGAA 11145 .......... .......... .......... .......... .......... .......... 477 CATCTCACGA GATTATTTTA TCTCATTTTT TTATATGATA AAAGTTCCAT CACAAAATAT 11085 .......... .......... .......... .......... .......... .......... 477 AAAAATAAAA TAAATTAATC TCAAAAGTAA CTAGTACCTT AAAATAATAT AAAATAAAAT 11025 .......... .......... .......... .......... .......... .......... 477 AATCCCATTT TATTAGAAAT TATTATCCAC AATTTTAGGG CAAAGTCAAA AGTAGATGGA 10965 .......... .......... .......... .......... .......... .......... 477 AATATTTGTT TATAGGCGGC TCTTAGAACA TTTTCAAGCT AAATGATGTT AGCTGCACGT 10905 .......... .......... .......... .......... .......... .......... 477 GCTACTTGAC ACAATGCCAA AAGATTAAAT TGAGCAAAAT TTATATTTTT ATTAAAAAAA 10845 .......... .......... .......... .......... .......... .......... 477 ATTATATTTA TAAACGTAGA AAATTCACTA TTTTTTTTTT ATCATTAACA TGTTTTACAT 10785 .......... .......... .......... .......... .......... .......... 477 ATTTTAGAGG ATTAAGAGTG AAAAAGATTC TAATAACTTG TTAACTTGAT ATAATAGATT 10725 .......... .......... .......... .......... .......... .......... 477 AACAAGTTGA TTATATCGCA CTCTAAAGAA TAAAATGAAT TGTCAAAAAT AATATTAATA 10665 .......... .......... .......... .......... .......... .......... 477 ATTTATCGCC ACTCAAAAAA ATAAAAAATA TTGTAGAACG TGACTTTATC AATACTAATC 10605 .......... .......... .......... .......... .......... .......... 477 TCTTTTAAAA CAACGATTGA TTTGAACTTC ACCGAAATTG ATGGAATGAA ATGACTAAAT 10545 .......... .......... .......... .......... .......... .......... 477 ATTGTATTGG GATAAAATAA TGGGATAATT GTATATAATA GCAAACTAAT AACCTAAAAT 10485 .......... .......... .......... .......... .......... .......... 477 AAATGGAGTA GCTATGATTT GATTTAATTG TGCACCATAG CAAACGTTAG CCAAA 10430 | | ||| | ||| .......... .......... .......... .......... CTACCGTAAT GAAAA 492 hqPGS_C08HBa0235H18.1-_SGN-E263405- (11801 11328) ******************************************************************************** EST sequence 94 -strand 613 n (File: SGN-E213028-) 1 CAGTTTAGCA ACTTAGATTT TTGGGACATT TCTTTAGTCG ATGGATTTAA TATTCCAATG 61 ACTTTTGCCC CAACAAAACC TAGTGGAGGA AAATGTCACG CAATTCATTG CACGGCCAAT 121 ATAAATGGTG AATGTCCTCG CGCCCTTAAG GTACCTGGAG GATGTAACAA CCCTTGTACC 181 ACGTTTGGAG GACAACAATA TTGTTGCACC CAAGGTCCAT GTGGCCCTAC AGAGTTGTCC 241 AAATTTTTCA AGAAAAGATG TCCCGATGCT TATAGCTACC CACAAGACGA TCCTACAAGC 301 ACATTTACTT GCCCTGGTGG TAGTACAAAC TATAGGGTTG TCTTTTGTCC TAATGGTGTT 361 GCTGATCCAA ATTTCCCCTT GGAGATGCCT GCAAGTACTG ATGAAGTGGC CAAGTGAATT 421 TGAGTTTCTT CATTTTAAAT CGCCTCAATT AGTCAACTGA TCTCTACCGT AATGAAAAAT 481 CTTAATAGCT CAGTTTTTTA AATATTCACT TTTACTTTAT TGATAAGAGT TCGTAACAAA 541 CTTAAAGACC GGAATAAGAG TTACATCTCA TGTGTAAAAA AAAAAAAAAA AAAAAAAAAA 601 ACTCGAGACT AGT Predicted gene structure (within gDNA segment 12586 to 8559): Exon 1 11787 11328 ( 460 n); cDNA 1 463 ( 463 n); score: 0.864 Intron 1 11327 10445 ( 883 n); Pd: 0.000 (s: 0.72), Pa: 0.122 (s: 0) Exon 2 10444 10430 ( 15 n); cDNA 464 478 ( 15 n); score: 0.600 PPA cDNA 576 602 MATCH C08HBa0235H18.1- SGN-E213028- 0.864 475 0.775 C PGS_C08HBa0235H18.1-_SGN-E213028- (11787 11328,10444 10430) Alignment (genomic DNA sequence = upper lines): CAGTTTAGCA ACCTAGATTT CTGGGACATT TCTTTAGTCG ATGGATTTAA TATTCCAATG 11728 |||||||||| || ||||||| ||||||||| |||||||||| |||||||||| |||||||||| CAGTTTAGCA ACTTAGATTT TTGGGACATT TCTTTAGTCG ATGGATTTAA TATTCCAATG 60 ACTTTCGCCC CGACCAATCC TAGTGGAGGG AAATGCCATG CAATTCATTG TACGGCTAAT 11668 ||||| |||| | || || || ||||||||| ||||| || | |||||||||| ||||| ||| ACTTTTGCCC CAACAAAACC TAGTGGAGGA AAATGTCACG CAATTCATTG CACGGCCAAT 120 ATAAATGGTG AATGTCCTGG TTCACTTAGG GTACCCGGAG GATGTAACAA TCCTTGTACC 11608 |||||||||| |||||||| | | |||| | ||||| |||| |||||||||| ||||||||| ATAAATGGTG AATGTCCTCG CGCCCTTAAG GTACCTGGAG GATGTAACAA CCCTTGTACC 180 ACGTTCGGAG GACAACAATA TTGTTGCACA CAAGGTCCAT GTGGCCCTAC TGATTTGTCG 11548 ||||| |||| |||||||||| ||||||||| |||||||||| |||||||||| || ||||| ACGTTTGGAG GACAACAATA TTGTTGCACC CAAGGTCCAT GTGGCCCTAC AGAGTTGTCC 240 AGATTTTTCA AACAAAGATG TCCTGATGCG TATAGCTACC CACAAGATGA TCCTACTAGC 11488 | |||||||| | ||||||| ||| ||||| |||||||||| ||||||| || |||||| ||| AAATTTTTCA AGAAAAGATG TCCCGATGCT TATAGCTACC CACAAGACGA TCCTACAAGC 300 ACATTTACTT GCCCTAGTGG TAGTACAAAT TATAGGGTTG TTTTTTGTCC TAATGGTGTT 11428 |||||||||| ||||| |||| ||||||||| |||||||||| | |||||||| |||||||||| ACATTTACTT GCCCTGGTGG TAGTACAAAC TATAGGGTTG TCTTTTGTCC TAATGGTGTT 360 ACTAGCCCAA ATTTCCCCTT GGAGATGCCC TCAAG---TG ATGAAGAGGC TAAGTAAAAT 11371 || |||| |||||||||| ||||||||| |||| || |||||| ||| |||| || | GCTGATCCAA ATTTCCCCTT GGAGATGCCT GCAAGTACTG ATGAAGTGGC CAAGTGAATT 420 TGAGTCACTT TCTTTTAAAT TGCTTGAAGT AGTCGAGTTA TATAATTGGC TTGTAATAAA 11311 ||||| ||| |||||||| || | || | |||| | | | | | TGAGTTTCTT CATTTTAAAT CGCCTCAATT AGTCAACTGA TCT....... .......... 463 CCTAATATAA TTACATGAAT AAAAGTCACA TCATCACAAA TATGTTGTTT CGAATATTAT 11251 .......... .......... .......... .......... .......... .......... 463 TTTATGTATA TTTTGTTATT TACGTATTAA CTTGTCAAAT AAAAGAATAA TATCAGTCAG 11191 .......... .......... .......... .......... .......... .......... 463 TTTAAAAACA TAAAAACTAT AATATACTGG ATAAGATAAA TAAGAACATC TCACGAGATT 11131 .......... .......... .......... .......... .......... .......... 463 ATTTTATCTC ATTTTTTTAT ATGATAAAAG TTCCATCACA AAATATAAAA ATAAAATAAA 11071 .......... .......... .......... .......... .......... .......... 463 TTAATCTCAA AAGTAACTAG TACCTTAAAA TAATATAAAA TAAAATAATC CCATTTTATT 11011 .......... .......... .......... .......... .......... .......... 463 AGAAATTATT ATCCACAATT TTAGGGCAAA GTCAAAAGTA GATGGAAATA TTTGTTTATA 10951 .......... .......... .......... .......... .......... .......... 463 GGCGGCTCTT AGAACATTTT CAAGCTAAAT GATGTTAGCT GCACGTGCTA CTTGACACAA 10891 .......... .......... .......... .......... .......... .......... 463 TGCCAAAAGA TTAAATTGAG CAAAATTTAT ATTTTTATTA AAAAAAATTA TATTTATAAA 10831 .......... .......... .......... .......... .......... .......... 463 CGTAGAAAAT TCACTATTTT TTTTTTATCA TTAACATGTT TTACATATTT TAGAGGATTA 10771 .......... .......... .......... .......... .......... .......... 463 AGAGTGAAAA AGATTCTAAT AACTTGTTAA CTTGATATAA TAGATTAACA AGTTGATTAT 10711 .......... .......... .......... .......... .......... .......... 463 ATCGCACTCT AAAGAATAAA ATGAATTGTC AAAAATAATA TTAATAATTT ATCGCCACTC 10651 .......... .......... .......... .......... .......... .......... 463 AAAAAAATAA AAAATATTGT AGAACGTGAC TTTATCAATA CTAATCTCTT TTAAAACAAC 10591 .......... .......... .......... .......... .......... .......... 463 GATTGATTTG AACTTCACCG AAATTGATGG AATGAAATGA CTAAATATTG TATTGGGATA 10531 .......... .......... .......... .......... .......... .......... 463 AAATAATGGG ATAATTGTAT ATAATAGCAA ACTAATAACC TAAAATAAAT GGAGTAGCTA 10471 .......... .......... .......... .......... .......... .......... 463 TGATTTGATT TAATTGTGCA CCATAGCAAA CGTTAGCCAA A 10430 | | ||| | || | .......... .......... ......CTAC CGTAATGAAA A 478 hqPGS_C08HBa0235H18.1-_SGN-E213028- (11787 11328) ******************************************************************************** EST sequence 1097 +strand 499 n (File: SGN-E356548+) 1 GAAAATGTCA CGCAATTCAT TGCACGGCCA ATATAAATGG TGAATGTCCT CGCGCCCTTA 61 AGGTACCTGG AGGATGTAAC AACCCTTGTA CCACGTTTGG AGGACAACAA TATTGTTGCA 121 CCCAAGGTCC ATGTGGCCCT ACAGAGTTGT CCAAATTTTT CAAGAAAAGA TGTCCCGATG 181 CTTATAGCTA CCCACAAGAC GATCCTACAA GCACATTTAC TTGCCCTGGT GGTAGTACAA 241 ACTATAGGGT TGTCTTTTGT CCTAATGGTG TTGCTGATCC AAATTTCCCC TTGGAGATGC 301 CTGCAAGTAC TGATGAAGTG GCCAAGTGAA TTTGAGTTTC TTCATTTTAA ATCGCCTCAA 361 TTAGTCAACT GATCTCTACC GTAATGAAAA ATCTTAATAG CTCAGTTTTT TAAATATTCA 421 CTTTTACTTT ATTGATAAGA GTTCGTAACA AACTTAAAGA CCGGAATAAG AGTTACATCT 481 CATGTGTAAA AAAAAAAAA Predicted gene structure (within gDNA segment 13181 to 8809): Exon 1 11697 11328 ( 370 n); cDNA 3 375 ( 373 n); score: 0.850 Intron 1 11327 10445 ( 883 n); Pd: 0.000 (s: 0.72), Pa: 0.122 (s: 0) Exon 2 10444 10430 ( 15 n); cDNA 376 390 ( 15 n); score: 0.600 PPA cDNA 488 499 MATCH C08HBa0235H18.1- SGN-E356548+ 0.850 385 0.772 C PGS_C08HBa0235H18.1-_SGN-E356548+ (11697 11328,10444 10430) Alignment (genomic DNA sequence = upper lines): AAATGCCATG CAATTCATTG TACGGCTAAT ATAAATGGTG AATGTCCTGG TTCACTTAGG 11638 ||||| || | |||||||||| ||||| ||| |||||||||| |||||||| | | |||| | AAATGTCACG CAATTCATTG CACGGCCAAT ATAAATGGTG AATGTCCTCG CGCCCTTAAG 62 GTACCCGGAG GATGTAACAA TCCTTGTACC ACGTTCGGAG GACAACAATA TTGTTGCACA 11578 ||||| |||| |||||||||| ||||||||| ||||| |||| |||||||||| ||||||||| GTACCTGGAG GATGTAACAA CCCTTGTACC ACGTTTGGAG GACAACAATA TTGTTGCACC 122 CAAGGTCCAT GTGGCCCTAC TGATTTGTCG AGATTTTTCA AACAAAGATG TCCTGATGCG 11518 |||||||||| |||||||||| || ||||| | |||||||| | ||||||| ||| ||||| CAAGGTCCAT GTGGCCCTAC AGAGTTGTCC AAATTTTTCA AGAAAAGATG TCCCGATGCT 182 TATAGCTACC CACAAGATGA TCCTACTAGC ACATTTACTT GCCCTAGTGG TAGTACAAAT 11458 |||||||||| ||||||| || |||||| ||| |||||||||| ||||| |||| ||||||||| TATAGCTACC CACAAGACGA TCCTACAAGC ACATTTACTT GCCCTGGTGG TAGTACAAAC 242 TATAGGGTTG TTTTTTGTCC TAATGGTGTT ACTAGCCCAA ATTTCCCCTT GGAGATGCCC 11398 |||||||||| | |||||||| |||||||||| || |||| |||||||||| ||||||||| TATAGGGTTG TCTTTTGTCC TAATGGTGTT GCTGATCCAA ATTTCCCCTT GGAGATGCCT 302 TCAAG---TG ATGAAGAGGC TAAGTAAAAT TGAGTCACTT TCTTTTAAAT TGCTTGAAGT 11341 |||| || |||||| ||| |||| || | ||||| ||| |||||||| || | || | GCAAGTACTG ATGAAGTGGC CAAGTGAATT TGAGTTTCTT CATTTTAAAT CGCCTCAATT 362 AGTCGAGTTA TATAATTGGC TTGTAATAAA CCTAATATAA TTACATGAAT AAAAGTCACA 11281 |||| | | | | | AGTCAACTGA TCT....... .......... .......... .......... .......... 375 TCATCACAAA TATGTTGTTT CGAATATTAT TTTATGTATA TTTTGTTATT TACGTATTAA 11221 .......... .......... .......... .......... .......... .......... 375 CTTGTCAAAT AAAAGAATAA TATCAGTCAG TTTAAAAACA TAAAAACTAT AATATACTGG 11161 .......... .......... .......... .......... .......... .......... 375 ATAAGATAAA TAAGAACATC TCACGAGATT ATTTTATCTC ATTTTTTTAT ATGATAAAAG 11101 .......... .......... .......... .......... .......... .......... 375 TTCCATCACA AAATATAAAA ATAAAATAAA TTAATCTCAA AAGTAACTAG TACCTTAAAA 11041 .......... .......... .......... .......... .......... .......... 375 TAATATAAAA TAAAATAATC CCATTTTATT AGAAATTATT ATCCACAATT TTAGGGCAAA 10981 .......... .......... .......... .......... .......... .......... 375 GTCAAAAGTA GATGGAAATA TTTGTTTATA GGCGGCTCTT AGAACATTTT CAAGCTAAAT 10921 .......... .......... .......... .......... .......... .......... 375 GATGTTAGCT GCACGTGCTA CTTGACACAA TGCCAAAAGA TTAAATTGAG CAAAATTTAT 10861 .......... .......... .......... .......... .......... .......... 375 ATTTTTATTA AAAAAAATTA TATTTATAAA CGTAGAAAAT TCACTATTTT TTTTTTATCA 10801 .......... .......... .......... .......... .......... .......... 375 TTAACATGTT TTACATATTT TAGAGGATTA AGAGTGAAAA AGATTCTAAT AACTTGTTAA 10741 .......... .......... .......... .......... .......... .......... 375 CTTGATATAA TAGATTAACA AGTTGATTAT ATCGCACTCT AAAGAATAAA ATGAATTGTC 10681 .......... .......... .......... .......... .......... .......... 375 AAAAATAATA TTAATAATTT ATCGCCACTC AAAAAAATAA AAAATATTGT AGAACGTGAC 10621 .......... .......... .......... .......... .......... .......... 375 TTTATCAATA CTAATCTCTT TTAAAACAAC GATTGATTTG AACTTCACCG AAATTGATGG 10561 .......... .......... .......... .......... .......... .......... 375 AATGAAATGA CTAAATATTG TATTGGGATA AAATAATGGG ATAATTGTAT ATAATAGCAA 10501 .......... .......... .......... .......... .......... .......... 375 ACTAATAACC TAAAATAAAT GGAGTAGCTA TGATTTGATT TAATTGTGCA CCATAGCAAA 10441 | | .......... .......... .......... .......... .......... ......CTAC 379 CGTTAGCCAA A 10430 ||| | || | CGTAATGAAA A 390 hqPGS_C08HBa0235H18.1-_SGN-E356548+ (11697 11328) ******************************************************************************** EST sequence 324 -strand 486 n (File: SGN-E276361-) 1 AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT GTAACAACCC TTGTACCACG 61 TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG GCCCTACAGA GTTGTCCAAA 121 TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC AAGACGATCC TACAAGCACA 181 TTTACTTGCC CTGGTGGTAG TACAAACTAT AGGGTTGTCT TTTGTCCTAA TGGTGTTGCT 241 GATCCAAATT TCCCCTTGGA GATGCCTGCA AGTACTGATG AAGTGGCCAA GTGAATTTGA 301 GTTTCTTCAT TTTAAATCGC CTCAATTAGT CAACTGATCT CTACCGTAAT GAAAAATCTT 361 AATAGCTCAG TTTTTTAAAT ATTCACTTTT ACTTTATTGA TAAGAGTTCG TAACAAACTT 421 AAAGACCGGA ATAAGAGTTA CATCTCATGT GTAAAAAAAA AAAAAAAAAA CTCGAGACTA 481 GTTCTC Predicted gene structure (within gDNA segment 12841 to 8599): Exon 1 11664 11328 ( 337 n); cDNA 1 340 ( 340 n); score: 0.847 Intron 1 11327 10445 ( 883 n); Pd: 0.000 (s: 0.72), Pa: 0.122 (s: 0) Exon 2 10444 10430 ( 15 n); cDNA 341 355 ( 15 n); score: 0.600 PPA cDNA 453 471 MATCH C08HBa0235H18.1- SGN-E276361- 0.847 352 0.724 C PGS_C08HBa0235H18.1-_SGN-E276361- (11664 11328,10444 10430) Alignment (genomic DNA sequence = upper lines): AATGGTGAAT GTCCTGGTTC ACTTAGGGTA CCCGGAGGAT GTAACAATCC TTGTACCACG 11605 |||||||||| ||||| | | |||| |||| || ||||||| ||||||| || |||||||||| AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT GTAACAACCC TTGTACCACG 60 TTCGGAGGAC AACAATATTG TTGCACACAA GGTCCATGTG GCCCTACTGA TTTGTCGAGA 11545 || ||||||| |||||||||| |||||| ||| |||||||||| ||||||| || ||||| | | TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG GCCCTACAGA GTTGTCCAAA 120 TTTTTCAAAC AAAGATGTCC TGATGCGTAT AGCTACCCAC AAGATGATCC TACTAGCACA 11485 |||||||| |||||||||| ||||| ||| |||||||||| |||| ||||| ||| |||||| TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC AAGACGATCC TACAAGCACA 180 TTTACTTGCC CTAGTGGTAG TACAAATTAT AGGGTTGTTT TTTGTCCTAA TGGTGTTACT 11425 |||||||||| || ||||||| |||||| ||| |||||||| | |||||||||| ||||||| || TTTACTTGCC CTGGTGGTAG TACAAACTAT AGGGTTGTCT TTTGTCCTAA TGGTGTTGCT 240 AGCCCAAATT TCCCCTTGGA GATGCCCTCA AG---TGATG AAGAGGCTAA GTAAAATTGA 11368 ||||||| |||||||||| |||||| || || ||||| ||| ||| || || || |||| GATCCAAATT TCCCCTTGGA GATGCCTGCA AGTACTGATG AAGTGGCCAA GTGAATTTGA 300 GTCACTTTCT TTTAAATTGC TTGAAGTAGT CGAGTTATAT AATTGGCTTG TAATAAACCT 11308 || ||| | ||||||| || | || |||| | | | || | GTTTCTTCAT TTTAAATCGC CTCAATTAGT CAACTGATCT .......... .......... 340 AATATAATTA CATGAATAAA AGTCACATCA TCACAAATAT GTTGTTTCGA ATATTATTTT 11248 .......... .......... .......... .......... .......... .......... 340 ATGTATATTT TGTTATTTAC GTATTAACTT GTCAAATAAA AGAATAATAT CAGTCAGTTT 11188 .......... .......... .......... .......... .......... .......... 340 AAAAACATAA AAACTATAAT ATACTGGATA AGATAAATAA GAACATCTCA CGAGATTATT 11128 .......... .......... .......... .......... .......... .......... 340 TTATCTCATT TTTTTATATG ATAAAAGTTC CATCACAAAA TATAAAAATA AAATAAATTA 11068 .......... .......... .......... .......... .......... .......... 340 ATCTCAAAAG TAACTAGTAC CTTAAAATAA TATAAAATAA AATAATCCCA TTTTATTAGA 11008 .......... .......... .......... .......... .......... .......... 340 AATTATTATC CACAATTTTA GGGCAAAGTC AAAAGTAGAT GGAAATATTT GTTTATAGGC 10948 .......... .......... .......... .......... .......... .......... 340 GGCTCTTAGA ACATTTTCAA GCTAAATGAT GTTAGCTGCA CGTGCTACTT GACACAATGC 10888 .......... .......... .......... .......... .......... .......... 340 CAAAAGATTA AATTGAGCAA AATTTATATT TTTATTAAAA AAAATTATAT TTATAAACGT 10828 .......... .......... .......... .......... .......... .......... 340 AGAAAATTCA CTATTTTTTT TTTATCATTA ACATGTTTTA CATATTTTAG AGGATTAAGA 10768 .......... .......... .......... .......... .......... .......... 340 GTGAAAAAGA TTCTAATAAC TTGTTAACTT GATATAATAG ATTAACAAGT TGATTATATC 10708 .......... .......... .......... .......... .......... .......... 340 GCACTCTAAA GAATAAAATG AATTGTCAAA AATAATATTA ATAATTTATC GCCACTCAAA 10648 .......... .......... .......... .......... .......... .......... 340 AAAATAAAAA ATATTGTAGA ACGTGACTTT ATCAATACTA ATCTCTTTTA AAACAACGAT 10588 .......... .......... .......... .......... .......... .......... 340 TGATTTGAAC TTCACCGAAA TTGATGGAAT GAAATGACTA AATATTGTAT TGGGATAAAA 10528 .......... .......... .......... .......... .......... .......... 340 TAATGGGATA ATTGTATATA ATAGCAAACT AATAACCTAA AATAAATGGA GTAGCTATGA 10468 .......... .......... .......... .......... .......... .......... 340 TTTGATTTAA TTGTGCACCA TAGCAAACGT TAGCCAAA 10430 | | ||| | ||| .......... .......... ...CTACCGT AATGAAAA 355 hqPGS_C08HBa0235H18.1-_SGN-E276361- (11664 11328) ******************************************************************************** EST sequence 127 -strand 431 n (File: SGN-E261117-) 1 GATGTACCAA CCCTTGTACC ACGTTTGGAG GACAACAATA TTGTTGCACC CAAGGTCCAT 61 GTGGCCCTAC AGAGTTGTCC AAATTTTTCA AGAAAAGATG TCCCGATGCT TATAGCTACC 121 CACAAGCCGA TCCTACAAGC ACATTTACTT GCCCTGGTGG TAGTACAAAC TATAGGGTTG 181 TCTTTTGTCC TAATGGTGTT GCTGATCCAA ATTTCCCCTT GGAGATGCCT GCAAGTTCTG 241 ATGAAGTGGC CAAGTGAATT TGAGTTTCTT CATTTTAAAT CGCCTCAATT AGTCAACTGA 301 TCTCTACCGT AATGAAAAAT CTTAATAGCT CAGTTTTTTA AATATTCACT TTTACTTTAT 361 TGATAAGAGT TCGTAACAAA CTTAAAGACC GGAATAAGAG TTACATCTCA TGGTAAAAAA 421 AAAAAAAAAA A Predicted gene structure (within gDNA segment 12471 to 8779): Exon 1 11627 11328 ( 300 n); cDNA 1 303 ( 303 n); score: 0.842 Intron 1 11327 10445 ( 883 n); Pd: 0.000 (s: 0.72), Pa: 0.122 (s: 0) Exon 2 10444 10430 ( 15 n); cDNA 304 318 ( 15 n); score: 0.600 PPA cDNA 415 431 MATCH C08HBa0235H18.1- SGN-E261117- 0.842 315 0.731 C PGS_C08HBa0235H18.1-_SGN-E261117- (11627 11328,10444 10430) Alignment (genomic DNA sequence = upper lines): GATGTAACAA TCCTTGTACC ACGTTCGGAG GACAACAATA TTGTTGCACA CAAGGTCCAT 11568 |||||| ||| ||||||||| ||||| |||| |||||||||| ||||||||| |||||||||| GATGTACCAA CCCTTGTACC ACGTTTGGAG GACAACAATA TTGTTGCACC CAAGGTCCAT 60 GTGGCCCTAC TGATTTGTCG AGATTTTTCA AACAAAGATG TCCTGATGCG TATAGCTACC 11508 |||||||||| || ||||| | |||||||| | ||||||| ||| ||||| |||||||||| GTGGCCCTAC AGAGTTGTCC AAATTTTTCA AGAAAAGATG TCCCGATGCT TATAGCTACC 120 CACAAGATGA TCCTACTAGC ACATTTACTT GCCCTAGTGG TAGTACAAAT TATAGGGTTG 11448 |||||| || |||||| ||| |||||||||| ||||| |||| ||||||||| |||||||||| CACAAGCCGA TCCTACAAGC ACATTTACTT GCCCTGGTGG TAGTACAAAC TATAGGGTTG 180 TTTTTTGTCC TAATGGTGTT ACTAGCCCAA ATTTCCCCTT GGAGATGCCC TCAAG---TG 11391 | |||||||| |||||||||| || |||| |||||||||| ||||||||| |||| || TCTTTTGTCC TAATGGTGTT GCTGATCCAA ATTTCCCCTT GGAGATGCCT GCAAGTTCTG 240 ATGAAGAGGC TAAGTAAAAT TGAGTCACTT TCTTTTAAAT TGCTTGAAGT AGTCGAGTTA 11331 |||||| ||| |||| || | ||||| ||| |||||||| || | || | |||| | | | ATGAAGTGGC CAAGTGAATT TGAGTTTCTT CATTTTAAAT CGCCTCAATT AGTCAACTGA 300 TATAATTGGC TTGTAATAAA CCTAATATAA TTACATGAAT AAAAGTCACA TCATCACAAA 11271 | | TCT....... .......... .......... .......... .......... .......... 303 TATGTTGTTT CGAATATTAT TTTATGTATA TTTTGTTATT TACGTATTAA CTTGTCAAAT 11211 .......... .......... .......... .......... .......... .......... 303 AAAAGAATAA TATCAGTCAG TTTAAAAACA TAAAAACTAT AATATACTGG ATAAGATAAA 11151 .......... .......... .......... .......... .......... .......... 303 TAAGAACATC TCACGAGATT ATTTTATCTC ATTTTTTTAT ATGATAAAAG TTCCATCACA 11091 .......... .......... .......... .......... .......... .......... 303 AAATATAAAA ATAAAATAAA TTAATCTCAA AAGTAACTAG TACCTTAAAA TAATATAAAA 11031 .......... .......... .......... .......... .......... .......... 303 TAAAATAATC CCATTTTATT AGAAATTATT ATCCACAATT TTAGGGCAAA GTCAAAAGTA 10971 .......... .......... .......... .......... .......... .......... 303 GATGGAAATA TTTGTTTATA GGCGGCTCTT AGAACATTTT CAAGCTAAAT GATGTTAGCT 10911 .......... .......... .......... .......... .......... .......... 303 GCACGTGCTA CTTGACACAA TGCCAAAAGA TTAAATTGAG CAAAATTTAT ATTTTTATTA 10851 .......... .......... .......... .......... .......... .......... 303 AAAAAAATTA TATTTATAAA CGTAGAAAAT TCACTATTTT TTTTTTATCA TTAACATGTT 10791 .......... .......... .......... .......... .......... .......... 303 TTACATATTT TAGAGGATTA AGAGTGAAAA AGATTCTAAT AACTTGTTAA CTTGATATAA 10731 .......... .......... .......... .......... .......... .......... 303 TAGATTAACA AGTTGATTAT ATCGCACTCT AAAGAATAAA ATGAATTGTC AAAAATAATA 10671 .......... .......... .......... .......... .......... .......... 303 TTAATAATTT ATCGCCACTC AAAAAAATAA AAAATATTGT AGAACGTGAC TTTATCAATA 10611 .......... .......... .......... .......... .......... .......... 303 CTAATCTCTT TTAAAACAAC GATTGATTTG AACTTCACCG AAATTGATGG AATGAAATGA 10551 .......... .......... .......... .......... .......... .......... 303 CTAAATATTG TATTGGGATA AAATAATGGG ATAATTGTAT ATAATAGCAA ACTAATAACC 10491 .......... .......... .......... .......... .......... .......... 303 TAAAATAAAT GGAGTAGCTA TGATTTGATT TAATTGTGCA CCATAGCAAA CGTTAGCCAA 10431 | | ||| | || .......... .......... .......... .......... ......CTAC CGTAATGAAA 317 A 10430 | A 318 hqPGS_C08HBa0235H18.1-_SGN-E261117- (11627 11328) ******************************************************************************** EST sequence 495 +strand 730 n (File: SGN-E210719+) 1 CGAGGGGAAC TAAGATGGCA CGTATATGGG GTCGTACTGG TTGCAACTTT AATGCTGCAG 61 GCAGAGGTAC ATGTCATACT GGTGATTGTG GTGGAGTCTT ACAGTGTACC GGATGGGGCA 121 AACCCCCAAA CACCCTAGCC GAGTACGCCT TGGACCAGTT TAGCAACTTA GATTTTTGGG 181 ACATTTCTTT AGTCGATGGA TTTAATATTC CAATGACTTT TGCCCCAACA AAACCTAGTG 241 GAGGAAAATG TCACGCAATT CATTGCACGG CCAATATAAA TGGTGAATGT CCTCGCGCCC 301 TTAAGGTACC TGGAGGATGT AACAACCCTT GTACCACGTT TGGAGGACAA CAATATTGTT 361 GCACCCAAGG TCCATGTGGC CCTACAGAGT TGTCCAAATT TTTCAAGAAA AGATGTCCCG 421 ATGCTTATAG CTACCCACAA GACGATCCTA CAAGCACATT TACTTGCCCT GGTGGTAGTA 481 CAAACTATAG GGTTGTCTTT TGTCCTAATG GTGTTGCTGA TCCAAATTTC CCCTTGGAGA 541 TGCCTGCAAG TACTGATGAA GTGGCCAAGT GAATTTGAGT TTCTTCATTT TAAATCGCCT 601 CAATTAGTCA ACTGATCTCT ACCGTAATGA AAGATCTTAA TAGCTCAGTT TTTTAAATAT 661 TCACTTTTAC TTTATTGATA AGAGTTCGTA GCAAACTTAA AGACCGGAAT AAGAGTTACA 721 TCTCAAAAAA Predicted gene structure (within gDNA segment 13775 to 8929): Exon 1 11942 11330 ( 613 n); cDNA 1 616 ( 616 n); score: 0.874 MATCH C08HBa0235H18.1- SGN-E210719+ 0.874 613 0.840 C PGS_C08HBa0235H18.1-_SGN-E210719+ (11942 11330) Alignment (genomic DNA sequence = upper lines): CGAGGGGCAC TAAGATGGCA CGTATATGGG GTCGTACGAA TTGCAACTTT GATGGTGCTG 11883 ||||||| || |||||||||| |||||||||| ||||||| |||||||||| ||| ||| | CGAGGGGAAC TAAGATGGCA CGTATATGGG GTCGTACTGG TTGCAACTTT AATGCTGCAG 60 GTAGAGGTTC ATGTCAGACT GGTGATTGTG GTGGGGTCTT GCAATGTACC GGGTGGGGCA 11823 | |||||| | |||||| ||| |||||||||| |||| ||||| || |||||| || ||||||| GCAGAGGTAC ATGTCATACT GGTGATTGTG GTGGAGTCTT ACAGTGTACC GGATGGGGCA 120 AACCACCAAA CACCCTGGCC GAGTACGCCT TGGACCAGTT TAGCAACCTA GATTTCTGGG 11763 |||| ||||| |||||| ||| |||||||||| |||||||||| ||||||| || ||||| |||| AACCCCCAAA CACCCTAGCC GAGTACGCCT TGGACCAGTT TAGCAACTTA GATTTTTGGG 180 ACATTTCTTT AGTCGATGGA TTTAATATTC CAATGACTTT CGCCCCGACC AATCCTAGTG 11703 |||||||||| |||||||||| |||||||||| |||||||||| ||||| || || ||||||| ACATTTCTTT AGTCGATGGA TTTAATATTC CAATGACTTT TGCCCCAACA AAACCTAGTG 240 GAGGGAAATG CCATGCAATT CATTGTACGG CTAATATAAA TGGTGAATGT CCTGGTTCAC 11643 |||| ||||| || |||||| ||||| |||| | |||||||| |||||||||| ||| | | | GAGGAAAATG TCACGCAATT CATTGCACGG CCAATATAAA TGGTGAATGT CCTCGCGCCC 300 TTAGGGTACC CGGAGGATGT AACAATCCTT GTACCACGTT CGGAGGACAA CAATATTGTT 11583 ||| |||||| ||||||||| ||||| |||| |||||||||| ||||||||| |||||||||| TTAAGGTACC TGGAGGATGT AACAACCCTT GTACCACGTT TGGAGGACAA CAATATTGTT 360 GCACACAAGG TCCATGTGGC CCTACTGATT TGTCGAGATT TTTCAAACAA AGATGTCCTG 11523 |||| ||||| |||||||||| ||||| || | |||| | ||| |||||| || |||||||| | GCACCCAAGG TCCATGTGGC CCTACAGAGT TGTCCAAATT TTTCAAGAAA AGATGTCCCG 420 ATGCGTATAG CTACCCACAA GATGATCCTA CTAGCACATT TACTTGCCCT AGTGGTAGTA 11463 |||| ||||| |||||||||| || ||||||| | |||||||| |||||||||| ||||||||| ATGCTTATAG CTACCCACAA GACGATCCTA CAAGCACATT TACTTGCCCT GGTGGTAGTA 480 CAAATTATAG GGTTGTTTTT TGTCCTAATG GTGTTACTAG CCCAAATTTC CCCTTGGAGA 11403 |||| ||||| |||||| ||| |||||||||| ||||| || ||||||||| |||||||||| CAAACTATAG GGTTGTCTTT TGTCCTAATG GTGTTGCTGA TCCAAATTTC CCCTTGGAGA 540 TGCCCTCAAG ---TGATGAA GAGGCTAAGT AAAATTGAGT CACTTTCTTT TAAATTGCTT 11346 |||| |||| ||||||| | ||| |||| || |||||| ||| ||| ||||| || | TGCCTGCAAG TACTGATGAA GTGGCCAAGT GAATTTGAGT TTCTTCATTT TAAATCGCCT 600 GAAGTAGTCG AGTTAT 11330 || ||||| | | || CAATTAGTCA ACTGAT 616 hqPGS_C08HBa0235H18.1-_SGN-E210719+ (11942 11330) ******************************************************************************** EST sequence 501 +strand 712 n (File: SGN-E210726+) 1 CGAGGGGAAC TAAGATGGCA CGTATATGGG GTCGTACTGG TTGCAACTTT AATGCTGCAG 61 GCAGAGGTAC ATGTCAGACT GGTGATTGTG GTGGAGTCTT ACAGTGTACC GGATGGGGCA 121 AACCCCCAAA CACCCTAGCC GAGTACGCCT TGGACCAGTT TAGCAACTTA GATTTTTGGG 181 ACATTTCTTT AGTCGATGGA TTTAATATTC CAATGACTTT TGCCCCAACA AAACCTAGTG 241 GAGGAAAATG TCACGCAATT CATTGCACGG CCAATATAAA TGGTGAATGT CCTCGCGCCC 301 TTAAGGTACC TGGAGGATGT AACAACCCTT GTACCACGTT TGGAGGACAA CAATATTGTT 361 GCACCCAAGG TCCATGTGGC CCTACAGAGT TGTCCAAATT TTTCAAGAAA AGATGTCCCG 421 ATGCTTATAG CTACCCACAA GACGATCCTA CAAGCACATT TACTTGCCCT GGTGGTAGTA 481 CAAACTATAG GGTTGTCTTT TGTCCTAATG GTGTTGCTGA TCCAAATTTC CCCTTGGAGA 541 TGCCTGCAAG TACTGATGAA GTGGCCAAGT GAATTTGAGT TTCTTCATTT TAAATCGCCT 601 CAATTAGTCA ACTGATCTCT ACCGTAATGA AAAATCTTAA TAGCTCAGTT TTTTAAATAT 661 TCACTTTTAC TTTATTGATA AGAGTTCGTA ACAAACTTAA AGAACCGGAA TA Predicted gene structure (within gDNA segment 13775 to 9109): Exon 1 11942 11330 ( 613 n); cDNA 1 616 ( 616 n); score: 0.875 MATCH C08HBa0235H18.1- SGN-E210726+ 0.875 613 0.861 C PGS_C08HBa0235H18.1-_SGN-E210726+ (11942 11330) Alignment (genomic DNA sequence = upper lines): CGAGGGGCAC TAAGATGGCA CGTATATGGG GTCGTACGAA TTGCAACTTT GATGGTGCTG 11883 ||||||| || |||||||||| |||||||||| ||||||| |||||||||| ||| ||| | CGAGGGGAAC TAAGATGGCA CGTATATGGG GTCGTACTGG TTGCAACTTT AATGCTGCAG 60 GTAGAGGTTC ATGTCAGACT GGTGATTGTG GTGGGGTCTT GCAATGTACC GGGTGGGGCA 11823 | |||||| | |||||||||| |||||||||| |||| ||||| || |||||| || ||||||| GCAGAGGTAC ATGTCAGACT GGTGATTGTG GTGGAGTCTT ACAGTGTACC GGATGGGGCA 120 AACCACCAAA CACCCTGGCC GAGTACGCCT TGGACCAGTT TAGCAACCTA GATTTCTGGG 11763 |||| ||||| |||||| ||| |||||||||| |||||||||| ||||||| || ||||| |||| AACCCCCAAA CACCCTAGCC GAGTACGCCT TGGACCAGTT TAGCAACTTA GATTTTTGGG 180 ACATTTCTTT AGTCGATGGA TTTAATATTC CAATGACTTT CGCCCCGACC AATCCTAGTG 11703 |||||||||| |||||||||| |||||||||| |||||||||| ||||| || || ||||||| ACATTTCTTT AGTCGATGGA TTTAATATTC CAATGACTTT TGCCCCAACA AAACCTAGTG 240 GAGGGAAATG CCATGCAATT CATTGTACGG CTAATATAAA TGGTGAATGT CCTGGTTCAC 11643 |||| ||||| || |||||| ||||| |||| | |||||||| |||||||||| ||| | | | GAGGAAAATG TCACGCAATT CATTGCACGG CCAATATAAA TGGTGAATGT CCTCGCGCCC 300 TTAGGGTACC CGGAGGATGT AACAATCCTT GTACCACGTT CGGAGGACAA CAATATTGTT 11583 ||| |||||| ||||||||| ||||| |||| |||||||||| ||||||||| |||||||||| TTAAGGTACC TGGAGGATGT AACAACCCTT GTACCACGTT TGGAGGACAA CAATATTGTT 360 GCACACAAGG TCCATGTGGC CCTACTGATT TGTCGAGATT TTTCAAACAA AGATGTCCTG 11523 |||| ||||| |||||||||| ||||| || | |||| | ||| |||||| || |||||||| | GCACCCAAGG TCCATGTGGC CCTACAGAGT TGTCCAAATT TTTCAAGAAA AGATGTCCCG 420 ATGCGTATAG CTACCCACAA GATGATCCTA CTAGCACATT TACTTGCCCT AGTGGTAGTA 11463 |||| ||||| |||||||||| || ||||||| | |||||||| |||||||||| ||||||||| ATGCTTATAG CTACCCACAA GACGATCCTA CAAGCACATT TACTTGCCCT GGTGGTAGTA 480 CAAATTATAG GGTTGTTTTT TGTCCTAATG GTGTTACTAG CCCAAATTTC CCCTTGGAGA 11403 |||| ||||| |||||| ||| |||||||||| ||||| || ||||||||| |||||||||| CAAACTATAG GGTTGTCTTT TGTCCTAATG GTGTTGCTGA TCCAAATTTC CCCTTGGAGA 540 TGCCCTCAAG ---TGATGAA GAGGCTAAGT AAAATTGAGT CACTTTCTTT TAAATTGCTT 11346 |||| |||| ||||||| | ||| |||| || |||||| ||| ||| ||||| || | TGCCTGCAAG TACTGATGAA GTGGCCAAGT GAATTTGAGT TTCTTCATTT TAAATCGCCT 600 GAAGTAGTCG AGTTAT 11330 || ||||| | | || CAATTAGTCA ACTGAT 616 hqPGS_C08HBa0235H18.1-_SGN-E210726+ (11942 11330) ******************************************************************************** EST sequence 76 -strand 781 n (File: SGN-E538598-) 1 CGTACTGGTT GCAACTTTAA TGCTGCAGGC AGAGGTACAT GTCAGACTGG TGATTGTGGT 61 GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAAAC ACCCTAGCCG AGTACGCCTT 121 GGACCAGTTT AGCAACTTAG ATTTTTGGGA CATTTCTTTA GTCGATGGAT TTAATATTCC 181 AATGACTTTT GCCCCAACAA AACCTAGTGG AGGAAAATGT CACGCAATTC ATTGCACGGC 241 CAATATAAAT GGTGAATGTC CTCGCGCCCT TAAGGTACCT GGAGGATGTA ACAACCCTTG 301 TACCACGTTT GGAGGACAAC AATATTGTTG CACCCAAGGT CCATGTGGCC CTACAGAGTT 361 GTCCAAATTT TTCAAGAAAA GATGTCCCGA TGCTTATAGC TACCCCCAAG ACGATCCTAC 421 AAGCACATTT ACTTGCCCTG GTGGTAGTAC AAACTATAGG GTTGTCTTTT GTCCTAATGG 481 TGTTGCTGAT CCAAATTTCC CCTTGGAGAT GCCTGCAAGT ACTGATGAAG TGGCCAAGTG 541 AATTTGAGTT TCTTCATTTT AAATCGCCTC AATTAGTCAA CTGATCTCTC CCGTAATGAA 601 AAATCTTAAT AGCTCAGTTT TTTAAATATT CACTTTTACT TTATTGATAA GAGTTCGTAA 661 CAAACTTAAA GACCGGAATA AGAGTTACAT CTCCATGTGT ACTTTTGTCT TAGATGTATA 721 AAACAACCAG TGCATTTGAA TTAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA 781 A Predicted gene structure (within gDNA segment 13475 to 7519): Exon 1 11910 11330 ( 581 n); cDNA 1 585 ( 585 n); score: 0.864 Intron 1 11329 11170 ( 160 n); Pd: 0.000 (s: 0.74), Pa: 0.000 (s: 0.52) Exon 2 11169 11078 ( 92 n); cDNA 586 674 ( 89 n); score: 0.592 Intron 2 11077 10237 ( 841 n); Pd: 0.000 (s: 0.64), Pa: 0.958 (s: 0) Exon 3 10236 10229 ( 8 n); cDNA 675 682 ( 8 n); score: 0.750 Intron 3 10228 8306 (1923 n); Pd: 0.587 (s: 0), Pa: 0.000 (s: 0) Exon 4 8305 8292 ( 14 n); cDNA 683 695 ( 13 n); score: 0.857 PPA cDNA 743 781 MATCH C08HBa0235H18.1- SGN-E538598- 0.827 695 0.890 C PGS_C08HBa0235H18.1-_SGN-E538598- (11910 11330,11169 11078,10236 10229,8305 8292) Alignment (genomic DNA sequence = upper lines): CGTACGAATT GCAACTTTGA TGGTGCTGGT AGAGGTTCAT GTCAGACTGG TGATTGTGGT 11851 ||||| || |||||||| | || ||| || |||||| ||| |||||||||| |||||||||| CGTACTGGTT GCAACTTTAA TGCTGCAGGC AGAGGTACAT GTCAGACTGG TGATTGTGGT 60 GGGGTCTTGC AATGTACCGG GTGGGGCAAA CCACCAA-AC ACCCTGGCCG AGTACGCCTT 11792 || ||||| | | |||||||| ||||||||| || |||| || ||||| |||| |||||||||| GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAAAC ACCCTAGCCG AGTACGCCTT 120 GGACCAGTTT AGCAACCTAG ATTTCTGGGA CATTTCTTTA GTCGATGGAT TTAATATTCC 11732 |||||||||| |||||| ||| |||| ||||| |||||||||| |||||||||| |||||||||| GGACCAGTTT AGCAACTTAG ATTTTTGGGA CATTTCTTTA GTCGATGGAT TTAATATTCC 180 AATGACTTTC GCCCCGACCA ATCCTAGTGG AGGGAAATGC CATGCAATTC ATTGTACGGC 11672 ||||||||| ||||| || | | |||||||| ||| ||||| || ||||||| |||| ||||| AATGACTTTT GCCCCAACAA AACCTAGTGG AGGAAAATGT CACGCAATTC ATTGCACGGC 240 TAATATAAAT GGTGAATGTC CTGGTTCACT TAGGGTACCC GGAGGATGTA ACAATCCTTG 11612 ||||||||| |||||||||| || | | || || |||||| |||||||||| |||| ||||| CAATATAAAT GGTGAATGTC CTCGCGCCCT TAAGGTACCT GGAGGATGTA ACAACCCTTG 300 TACCACGTTC GGAGGACAAC AATATTGTTG CACACAAGGT CCATGTGGCC CTACTGATTT 11552 ||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| |||| || || TACCACGTTT GGAGGACAAC AATATTGTTG CACCCAAGGT CCATGTGGCC CTACAGAGTT 360 GTCGAGATTT TTCAAACAAA GATGTCCTGA TGCGTATAGC TACCCACAAG ATGATCCTAC 11492 ||| | |||| ||||| ||| ||||||| || ||| |||||| ||||| |||| | |||||||| GTCCAAATTT TTCAAGAAAA GATGTCCCGA TGCTTATAGC TACCCCCAAG ACGATCCTAC 420 TAGCACATTT ACTTGCCCTA GTGGTAGTAC AAATTATAGG GTTGTTTTTT GTCCTAATGG 11432 ||||||||| ||||||||| |||||||||| ||| |||||| ||||| |||| |||||||||| AAGCACATTT ACTTGCCCTG GTGGTAGTAC AAACTATAGG GTTGTCTTTT GTCCTAATGG 480 TGTTACTAGC CCAAATTTCC CCTTGGAGAT GCCCTCAAG- --TGATGAAG AGGCTAAGTA 11375 |||| || |||||||||| |||||||||| ||| |||| |||||||| ||| |||| TGTTGCTGAT CCAAATTTCC CCTTGGAGAT GCCTGCAAGT ACTGATGAAG TGGCCAAGTG 540 AAATTGAGTC ACTTTCTTTT AAATTGCTTG AAGTAGTCGA GTTATATAAT TGGCTTGTAA 11315 || |||||| ||| |||| |||| || | || ||||| | | || AATTTGAGTT TCTTCATTTT AAATCGCCTC AATTAGTCAA CTGAT..... .......... 585 TAAACCTAAT ATAATTACAT GAATAAAAGT CACATCATCA CAAATATGTT GTTTCGAATA 11255 .......... .......... .......... .......... .......... .......... 585 TTATTTTATG TATATTTTGT TATTTACGTA TTAACTTGTC AAATAAAAGA ATAATATCAG 11195 .......... .......... .......... .......... .......... .......... 585 TCAGTTTAAA AACATAAAAA CTATAATATA CTGGATAAGA TAAATAAGAA CATCTCACGA 11135 | | | | | | || |||| || | |||| .......... .......... .....CTCTC CCGTA-ATGA AAAATCTTAA TAGCTCAGTT 619 GATTATTTTA TCTCATTT-T TTTATATGAT AAAAGTTCCA TCACAAAATA TAAAAATAAA 11076 ||| | || | ||| ||||| |||| || |||| | | ||||| | |||| | TTTTAAATAT TCACTTTTAC TTTAT-TGAT AAGAGTT-CG TAACAAACT- TAAAGACC.. 674 ATAAATTAAT CTCAAAAGTA ACTAGTACCT TAAAATAATA TAAAATAAAA TAATCCCATT 11016 .......... .......... .......... .......... .......... .......... 674 TTATTAGAAA TTATTATCCA CAATTTTAGG GCAAAGTCAA AAGTAGATGG AAATATTTGT 10956 .......... .......... .......... .......... .......... .......... 674 TTATAGGCGG CTCTTAGAAC ATTTTCAAGC TAAATGATGT TAGCTGCACG TGCTACTTGA 10896 .......... .......... .......... .......... .......... .......... 674 CACAATGCCA AAAGATTAAA TTGAGCAAAA TTTATATTTT TATTAAAAAA AATTATATTT 10836 .......... .......... .......... .......... .......... .......... 674 ATAAACGTAG AAAATTCACT ATTTTTTTTT TATCATTAAC ATGTTTTACA TATTTTAGAG 10776 .......... .......... .......... .......... .......... .......... 674 GATTAAGAGT GAAAAAGATT CTAATAACTT GTTAACTTGA TATAATAGAT TAACAAGTTG 10716 .......... .......... .......... .......... .......... .......... 674 ATTATATCGC ACTCTAAAGA ATAAAATGAA TTGTCAAAAA TAATATTAAT AATTTATCGC 10656 .......... .......... .......... .......... .......... .......... 674 CACTCAAAAA AATAAAAAAT ATTGTAGAAC GTGACTTTAT CAATACTAAT CTCTTTTAAA 10596 .......... .......... .......... .......... .......... .......... 674 ACAACGATTG ATTTGAACTT CACCGAAATT GATGGAATGA AATGACTAAA TATTGTATTG 10536 .......... .......... .......... .......... .......... .......... 674 GGATAAAATA ATGGGATAAT TGTATATAAT AGCAAACTAA TAACCTAAAA TAAATGGAGT 10476 .......... .......... .......... .......... .......... .......... 674 AGCTATGATT TGATTTAATT GTGCACCATA GCAAACGTTA GCCAAAGTTT GTCAGTCGCC 10416 .......... .......... .......... .......... .......... .......... 674 TCTCTCTCTT TATACACAAA AGTGTATAAA TTGTGTTTCT GTTTTGTATA AGCGAGAGAA 10356 .......... .......... .......... .......... .......... .......... 674 AACTGTATAT ACACATGCAA AAACATATAT CTTCGTGTTA TACACTTAAT TATACAATTT 10296 .......... .......... .......... .......... .......... .......... 674 ACAAATATTT TACTTCAATT CAATTGTAGA CAAATGCAAA TTTTATACAA ATATTGCAGC 10236 .......... .......... .......... .......... .......... .........G 675 GAAAAAGGCG AACGAATTAT ACAATTGCAG TGAAATACAA TTTTCTCTTG CTTTATACAA 10176 ||| ||| GAATAAG... .......... .......... .......... .......... .......... 682 CAGAAGTGTA TAAATTGTGT TTATGTTTTT GTATAAAGCG AGAGAAAAAC ATATATTTTT 10116 .......... .......... .......... .......... .......... .......... 682 TTCCTATACA CTTATAATTA TGCAATATAC ATACATTTTA CTTCGATTCA ATTGTATGCA 10056 .......... .......... .......... .......... .......... .......... 682 AAATAAATTT TATACAAATA TTGCAGAGAA TTATACAATA TGCATTATAC AATTGCAGTG 9996 .......... .......... .......... .......... .......... .......... 682 AAATATGATA GCGAATTATA CAATTGCGGC GAAATAGGCC AGCAAATTAT ACAATTGTAT 9936 .......... .......... .......... .......... .......... .......... 682 ATTATAGTGA ATTATACAGT TTTATGTTTG CTATGGAGCG TAATTATACA AATTTTGCTA 9876 .......... .......... .......... .......... .......... .......... 682 TAACACACAA ATATAAATTT TTTATTTGCT ATATGCGAAA GTTGTCCTAA AACAATTAAC 9816 .......... .......... .......... .......... .......... .......... 682 AACATTACTC TTGAAAATAA TATTCTTTTG TCAATATAGT AAGTAATGAT GAATAATTAT 9756 .......... .......... .......... .......... .......... .......... 682 TTAACCACCA AAGTAACATA AAAAACCCCA CTCACCAATA TCTCCATATA CCCCCATTTT 9696 .......... .......... .......... .......... .......... .......... 682 CTTGACTTTT TTGAGTGTAG ATACACATAC GTTTTTCTTT TAATTATATA TCCACTTGAC 9636 .......... .......... .......... .......... .......... .......... 682 ACATGACATA TTTTTTTATA ATAATGGCGT GGAGTTAAAA AGTTTACGTA ATGTGAATTT 9576 .......... .......... .......... .......... .......... .......... 682 AAATTATTAA GTTAAGTTTT AAGAAAAAAA AGAGTGAAAT TATTTGAACA TATTTTGTTA 9516 .......... .......... .......... .......... .......... .......... 682 ATGATCAGTT ATTTCAAATA AAACATGATA AATATTTTAA AATGAATTGA ATATTATGGT 9456 .......... .......... .......... .......... .......... .......... 682 GCTAAGGACT TTGCTTCTTA TTATCAGGAG TGATTGCATA AAAGTCACGG AATATGCACC 9396 .......... .......... .......... .......... .......... .......... 682 ATAACGTGCT GAAAATATGC AAAGGGGCTG TGGTGGGATG TTAGTTTTCA ATTTTTAATT 9336 .......... .......... .......... .......... .......... .......... 682 TGATATATCG AGTTTGAGCC ATGAGAGTAA ATTTCTTTTC ATTATATATA ATAAGTGTTT 9276 .......... .......... .......... .......... .......... .......... 682 TGCCTTCAAA GTGAAATTTT TCGAATGCAA ATTTAAATTT ATCAAGCTCA ATACAAATGT 9216 .......... .......... .......... .......... .......... .......... 682 TGAATATCAA GAGCATGATT AATAGCGGAG TAATAATTTT CATTAGAGGA TTTTGAAATA 9156 .......... .......... .......... .......... .......... .......... 682 TGAGAAAATA AACACACTAA CAATTTAAAG AAAAAAAAAA TTCATTCATT AATTAATCAC 9096 .......... .......... .......... .......... .......... .......... 682 TGTATATACA TTAAAAATAA TTTTAACTAT ATATAAATAA AATTAATAAT TATCTATTTA 9036 .......... .......... .......... .......... .......... .......... 682 AAAAATTGAA TAAACCCCTT AATTCTACGT GGCTCCACCT TAACCTTTGC ATGAAATATT 8976 .......... .......... .......... .......... .......... .......... 682 CTAAAAGCCG CCTACAAAAA AGATTTCCAC CTCGACTAAT TATTATGTCC TATAAAGATA 8916 .......... .......... .......... .......... .......... .......... 682 GCTATCCTAT ATAGTAATTA TAATAGTTTA TCTTGTCCCT ACAATTTTAT ATTTTTGATC 8856 .......... .......... .......... .......... .......... .......... 682 TGATTACGGT AGAATGTTAT CAATACTATT TTTCATTCCT TTTTTTGTCT AAGGTTTAAG 8796 .......... .......... .......... .......... .......... .......... 682 ACTTAGATAA TTAGGAATTA AAAAGACAAA ATTAAACGAT ACTCCAAATG CACTCTTGTG 8736 .......... .......... .......... .......... .......... .......... 682 TGAGAATTTT GAACATCATG TGTAAGACAA ATTAAAGTAC AATATGTTAT TGAAATCTTA 8676 .......... .......... .......... .......... .......... .......... 682 GCCACCTCAA GATAACAAAC TAAAAGAAAT GTGGATAATA CAAAAGACAA GTAATGAACA 8616 .......... .......... .......... .......... .......... .......... 682 AAACTCAACC ATTTTGAACA AGAAAGAGGT GGCTACACTC ATGATGAATC TACTTATTAA 8556 .......... .......... .......... .......... .......... .......... 682 GCAACTTCAA GAGTACTTGT AGGCATCTCC AATGGGAAAT TTGTTGTTTC ATTGTGAGTA 8496 .......... .......... .......... .......... .......... .......... 682 GAGCCATAAG GACAGAACAT TATCTTGTAG TCTGTAGTCC AACTCTGACA AGTAAAAGTA 8436 .......... .......... .......... .......... .......... .......... 682 CTAGTTGGAT CGTCTTGAGG GTAACTATAG GCATCAGGAC ATCTTTGTTT GAAAAATCTT 8376 .......... .......... .......... .......... .......... .......... 682 GACAATTCAG TAGGACCACA TGGACCGTGA TTACAACAAT ATTGTTGTCC TCCGAATGTT 8316 .......... .......... .......... .......... .......... .......... 682 GTACAAGGGT TGTTACATCC TCCA 8292 ||||||| | |||| .......... AGTTACAT-C TCCA 695 hqPGS_C08HBa0235H18.1-_SGN-E538598- (11910 11330) ******************************************************************************** EST sequence 945 +strand 703 n (File: SGN-E274671+) 1 CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC 61 CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC 121 GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG AAAATGTCAC 181 GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA GGTACCTGGA 241 GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC CCAAGGTCCA 301 TGTGGCCCTA CAGAGTTGTC CAAATTTTTC AAGAAAAGAT GTCCCGATGC TTATAGCTAC 361 CCACAAGACG ATCCTACAAG CACATTTACT TGCCCTGGTG GTAGTACAAA CTATAGGGTT 421 GTCTTTTGTC CTAATGGTGT TGCTGATCCA AATTTCCCCT TGGAGATGCC TGCAAGTACT 481 GATGAAGTGG CCAAGTGAAT TTGAGTTTCT TCATTTTAAA TCGCCTCAAT TAGTCAACTG 541 ATCTCTACCG TAATGAAAAA TCTTAATAGC TCAGTTTTTT AAATATTCAC TTTTACTTTA 601 TTGATAAGAG TTCGTAACAA ACTTAAAGAC CGGAATAAGA GTTACATCTC ATGTGTACTT 661 TTGTCTTAGA TGTATAAAAC AACAGTGCAT TTGANAAAAA AAA Predicted gene structure (within gDNA segment 13035 to 8459): Exon 1 11868 11330 ( 539 n); cDNA 1 542 ( 542 n); score: 0.875 Intron 1 11329 11170 ( 160 n); Pd: 0.000 (s: 0.74), Pa: 0.000 (s: 0.54) Exon 2 11169 11089 ( 81 n); cDNA 543 621 ( 79 n); score: 0.611 MATCH C08HBa0235H18.1- SGN-E274671+ 0.840 620 0.882 C PGS_C08HBa0235H18.1-_SGN-E274671+ (11868 11330,11169 11089) Alignment (genomic DNA sequence = upper lines): CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC ACCAAACACC 11809 |||||||||| |||||||||| ||||| || |||||||| | |||||||||| ||||||||| CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC 60 CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT TTCTTTAGTC 11749 || ||||||| |||||||||| |||||||||| ||| |||||| | |||||||| |||||||||| CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC 120 GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG GAAATGCCAT 11689 |||||||||| |||||||||| |||||| ||| || || || | |||||||||| ||||| || GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG AAAATGTCAC 180 GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG GGTACCCGGA 11629 |||||||||| | ||||| || |||||||||| ||||||||| | | |||| |||||| ||| GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA GGTACCTGGA 240 GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT ATTGTTGCAC ACAAGGTCCA 11569 |||||||||| | |||||||| |||||| ||| |||||||||| |||||||||| ||||||||| GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC CCAAGGTCCA 300 TGTGGCCCTA CTGATTTGTC GAGATTTTTC AAACAAAGAT GTCCTGATGC GTATAGCTAC 11509 |||||||||| | || ||||| | ||||||| || |||||| |||| ||||| ||||||||| TGTGGCCCTA CAGAGTTGTC CAAATTTTTC AAGAAAAGAT GTCCCGATGC TTATAGCTAC 360 CCACAAGATG ATCCTACTAG CACATTTACT TGCCCTAGTG GTAGTACAAA TTATAGGGTT 11449 |||||||| | ||||||| || |||||||||| |||||| ||| |||||||||| ||||||||| CCACAAGACG ATCCTACAAG CACATTTACT TGCCCTGGTG GTAGTACAAA CTATAGGGTT 420 GTTTTTTGTC CTAATGGTGT TACTAGCCCA AATTTCCCCT TGGAGATGCC CTCAAG---T 11392 || ||||||| |||||||||| | || ||| |||||||||| |||||||||| |||| | GTCTTTTGTC CTAATGGTGT TGCTGATCCA AATTTCCCCT TGGAGATGCC TGCAAGTACT 480 GATGAAGAGG CTAAGTAAAA TTGAGTCACT TTCTTTTAAA TTGCTTGAAG TAGTCGAGTT 11332 ||||||| || | |||| || |||||| || | ||||||| | || | || ||||| | | GATGAAGTGG CCAAGTGAAT TTGAGTTTCT TCATTTTAAA TCGCCTCAAT TAGTCAACTG 540 ATATAATTGG CTTGTAATAA ACCTAATATA ATTACATGAA TAAAAGTCAC ATCATCACAA 11272 || AT........ .......... .......... .......... .......... .......... 542 ATATGTTGTT TCGAATATTA TTTTATGTAT ATTTTGTTAT TTACGTATTA ACTTGTCAAA 11212 .......... .......... .......... .......... .......... .......... 542 TAAAAGAATA ATATCAGTCA GTTTAAAAAC ATAAAAACTA TAATATACTG GATAAGATAA 11152 | ||| | | | || || .......... .......... .......... .......... ..CTCTACCG TA-ATGAAAA 559 ATAAGAACAT CTCACGAGAT TATTTTATCT CATTT-TTTT ATATGATAAA AGTTCCATCA 11093 || || | |||| | || | || | ||| ||| || |||||| |||| | | | ATCTTAATAG CTCAGTTTTT TAAATATTCA CTTTTACTTT AT-TGATAAG AGTT-CGTAA 617 CAAA 11089 |||| CAAA 621 hqPGS_C08HBa0235H18.1-_SGN-E274671+ (11868 11330) ******************************************************************************** EST sequence 1084 +strand 536 n (File: SGN-E398465+) 1 GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC CGAATACGCC 61 TTGGACCAGT TTAGCAACTT AAATTTTTGG GACATTTCTT TAGTCGATGG ATTTAATATT 121 CCAATGACTT TTGCCCCGTC AAAACCTATT GGAGGAAAAT GTCACGCGAT TCATTGCACG 181 GCCAATATAA GTGGTGAATG TCCTCTCGCC CTTAGGGTAC CTGGAGGATG TACCGGCCCT 241 TGTACCACGT TTGGAGGACA AGAATATTGT TGCACCCAAG GTCCATGTGG CCCTACATAG 301 TTGTCCAAAT TTTTCAAGAA AAGATGTCCC GATGCTTATA GCTACCCACA ATACTATCCT 361 ACAGGCGCAT TTACTTGCCC TGGTGGTAGT ACTAACTATA GGGTTGTCTT TTGTCCTACT 421 GGTGTTGCTG ATCCTGATTT CCCCTTGGAG ATGCCTGCAA GTACTGATGA AGTGGCGAAG 481 TGAATTTGAG TTTCTTCATT TTAAATCACC TCAATTAGTC AACTGATCTC TACCGT Predicted gene structure (within gDNA segment 12939 to 7063): Exon 1 11853 11330 ( 524 n); cDNA 1 527 ( 527 n); score: 0.835 MATCH C08HBa0235H18.1- SGN-E398465+ 0.835 524 0.978 C PGS_C08HBa0235H18.1-_SGN-E398465+ (11853 11330) Alignment (genomic DNA sequence = upper lines): GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA ACACCCTGGC CGAGTACGCC 11794 ||||| |||| | || ||||| ||| |||||| ||||| |||| ||||||| || ||| |||||| GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC CGAATACGCC 60 TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG ATTTAATATT 11734 |||||||||| |||||||| | | |||| ||| |||||||||| |||||||||| |||||||||| TTGGACCAGT TTAGCAACTT AAATTTTTGG GACATTTCTT TAGTCGATGG ATTTAATATT 120 CCAATGACTT TCGCCCCGAC CAATCCTAGT GGAGGGAAAT GCCATGCAAT TCATTGTACG 11674 |||||||||| | |||||| | || |||| | ||||| |||| | || || || |||||| ||| CCAATGACTT TTGCCCCGTC AAAACCTATT GGAGGAAAAT GTCACGCGAT TCATTGCACG 180 GCTAATATAA ATGGTGAATG TCCTGGTTCA CTTAGGGTAC CCGGAGGATG TAACAATCCT 11614 || ||||||| ||||||||| |||| | |||||||||| | |||||||| || | ||| GCCAATATAA GTGGTGAATG TCCTCTCGCC CTTAGGGTAC CTGGAGGATG TACCGGCCCT 240 TGTACCACGT TCGGAGGACA ACAATATTGT TGCACACAAG GTCCATGTGG CCCTACTGAT 11554 |||||||||| | |||||||| | |||||||| ||||| |||| |||||||||| |||||| | TGTACCACGT TTGGAGGACA AGAATATTGT TGCACCCAAG GTCCATGTGG CCCTACATAG 300 TTGTCGAGAT TTTTCAAACA AAGATGTCCT GATGCGTATA GCTACCCACA AGATGATCCT 11494 ||||| | || ||||||| | ||||||||| ||||| |||| |||||||||| | | ||||| TTGTCCAAAT TTTTCAAGAA AAGATGTCCC GATGCTTATA GCTACCCACA ATACTATCCT 360 ACTAGCACAT TTACTTGCCC TAGTGGTAGT ACAAATTATA GGGTTGTTTT TTGTCCTAAT 11434 || || ||| |||||||||| | |||||||| || || |||| ||||||| || |||||||| | ACAGGCGCAT TTACTTGCCC TGGTGGTAGT ACTAACTATA GGGTTGTCTT TTGTCCTACT 420 GGTGTTACTA GCCCAAATTT CCCCTTGGAG ATGCCCTCAA G---TGATGA AGAGGCTAAG 11377 |||||| || || |||| |||||||||| ||||| ||| | |||||| || ||| ||| GGTGTTGCTG ATCCTGATTT CCCCTTGGAG ATGCCTGCAA GTACTGATGA AGTGGCGAAG 480 TAAAATTGAG TCACTTTCTT TTAAATTGCT TGAAGTAGTC GAGTTAT 11330 | || ||||| | ||| || |||||| | | || ||||| | | || TGAATTTGAG TTTCTTCATT TTAAATCACC TCAATTAGTC AACTGAT 527 hqPGS_C08HBa0235H18.1-_SGN-E398465+ (11853 11330) ******************************************************************************** EST sequence 251 -strand 665 n (File: SGN-E390304-) 1 CCTAGCCGAG TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA TTTCTTTAGT 61 CGATGGATTT AATATTTCAA AGACTTTTGC CCCAACAAAA CCTAGTGGAG GAAAATGTCA 121 CGCAATTCAT TGCACGGCCA ATATAAATGG TGAATGTCCT CGCGCCCTTA AGGTACCTGG 181 AGGATGTAAC AACCCCTGTA CCACGTTTGG AGGACAACAA TATTGTTGCA CCCAAGGTCC 241 ATGTGGCCCT ACAGAGTTGT CCAAATTTTT CAAGAAAAGA TGTCCCGATG GTTATAGCTA 301 CCCCCAAGAC GATCCTACAA GCACATTTAC TTGCCCTGGT GGTAGTACAA AATATAGGGT 361 TGTTTTTTGT CCTAATGGGG TTGGTGATCC AAATTTCCCC TTGGAGATGC CTGCAAGTAC 421 TGATGAAGTG GCCAAGTGAA TTTGAGTTTT TTCATTTTAA ATTGCCTCAA TTAGTCAACT 481 GATTTTTACC GTAATGAAAA ATTTTAATAG CTCAGTTTTT TAAATATTCA CTTTTACTTT 541 ATTGATAAGA GTTTGTAACA AACTTAAAGA CCGGAATAAG AGTTACATTT CATGTGTACT 601 TTTGTTTTAG ATGTATAAAA CAACAGTGCA TTTGGAAAAA AAAAAAAAAA AAAAAAAAAA 661 AAAAA Predicted gene structure (within gDNA segment 12455 to 8259): Exon 1 11809 11330 ( 480 n); cDNA 1 483 ( 483 n); score: 0.857 Intron 1 11329 11170 ( 160 n); Pd: 0.000 (s: 0.74), Pa: 0.000 (s: 0.54) Exon 2 11169 11078 ( 92 n); cDNA 484 572 ( 89 n); score: 0.592 Intron 2 11077 10237 ( 841 n); Pd: 0.000 (s: 0.62), Pa: 0.958 (s: 0) Exon 3 10236 10229 ( 8 n); cDNA 573 580 ( 8 n); score: 0.750 PPA cDNA 636 665 MATCH C08HBa0235H18.1- SGN-E390304- 0.815 580 0.872 C PGS_C08HBa0235H18.1-_SGN-E390304- (11809 11330,11169 11078,10236 10229) Alignment (genomic DNA sequence = upper lines): CCTGGCCGAG TACGCCTTGG ACCAGTTTAG CAACCTAGAT TTCTGGGACA TTTCTTTAGT 11750 ||| |||||| |||||||||| |||||||||| |||| ||||| || ||||||| |||||||||| CCTAGCCGAG TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA TTTCTTTAGT 60 CGATGGATTT AATATTCCAA TGACTTTCGC CCCGACCAAT CCTAGTGGAG GGAAATGCCA 11690 |||||||||| |||||| ||| |||||| || ||| || || |||||||||| | ||||| || CGATGGATTT AATATTTCAA AGACTTTTGC CCCAACAAAA CCTAGTGGAG GAAAATGTCA 120 TGCAATTCAT TGTACGGCTA ATATAAATGG TGAATGTCCT GGTTCACTTA GGGTACCCGG 11630 ||||||||| || ||||| | |||||||||| |||||||||| | | |||| |||||| || CGCAATTCAT TGCACGGCCA ATATAAATGG TGAATGTCCT CGCGCCCTTA AGGTACCTGG 180 AGGATGTAAC AATCCTTGTA CCACGTTCGG AGGACAACAA TATTGTTGCA CACAAGGTCC 11570 |||||||||| || || |||| ||||||| || |||||||||| |||||||||| | |||||||| AGGATGTAAC AACCCCTGTA CCACGTTTGG AGGACAACAA TATTGTTGCA CCCAAGGTCC 240 ATGTGGCCCT ACTGATTTGT CGAGATTTTT CAAACAAAGA TGTCCTGATG CGTATAGCTA 11510 |||||||||| || || |||| | | |||||| ||| ||||| ||||| |||| |||||||| ATGTGGCCCT ACAGAGTTGT CCAAATTTTT CAAGAAAAGA TGTCCCGATG GTTATAGCTA 300 CCCACAAGAT GATCCTACTA GCACATTTAC TTGCCCTAGT GGTAGTACAA ATTATAGGGT 11450 ||| ||||| |||||||| | |||||||||| ||||||| || |||||||||| | |||||||| CCCCCAAGAC GATCCTACAA GCACATTTAC TTGCCCTGGT GGTAGTACAA AATATAGGGT 360 TGTTTTTTGT CCTAATGGTG TTACTAGCCC AAATTTCCCC TTGGAGATGC CCTCAAG--- 11393 |||||||||| |||||||| | || | || |||||||||| |||||||||| | |||| TGTTTTTTGT CCTAATGGGG TTGGTGATCC AAATTTCCCC TTGGAGATGC CTGCAAGTAC 420 TGATGAAGAG GCTAAGTAAA ATTGAGTCAC TTTCTTTTAA ATTGCTTGAA GTAGTCGAGT 11333 |||||||| | || |||| || |||||| || |||||| ||||| | || ||||| | | TGATGAAGTG GCCAAGTGAA TTTGAGTTTT TTCATTTTAA ATTGCCTCAA TTAGTCAACT 480 TATATAATTG GCTTGTAATA AACCTAATAT AATTACATGA ATAAAAGTCA CATCATCACA 11273 || GAT....... .......... .......... .......... .......... .......... 483 AATATGTTGT TTCGAATATT ATTTTATGTA TATTTTGTTA TTTACGTATT AACTTGTCAA 11213 .......... .......... .......... .......... .......... .......... 483 ATAAAAGAAT AATATCAGTC AGTTTAAAAA CATAAAAACT ATAATATACT GGATAAGATA 11153 | ||| | | | || | .......... .......... .......... .......... ...TTTTACC GTA-ATGAAA 499 AATAAGAACA TCTCACGAGA TTATTTTATC TCATTT-TTT TATATGATAA AAGTTCCATC 11094 ||| || | |||| ||| | || | ||| || ||| |||||| |||| | AATTTTAATA GCTCAGTTTT TTAAATATTC ACTTTTACTT TAT-TGATAA GAGTT-TGTA 557 ACAAAATATA AAAATAAAAT AAATTAATCT CAAAAGTAAC TAGTACCTTA AAATAATATA 11034 ||||| | || || | ACAAACT-TA AAGACC.... .......... .......... .......... .......... 572 AAATAAAATA ATCCCATTTT ATTAGAAATT ATTATCCACA ATTTTAGGGC AAAGTCAAAA 10974 .......... .......... .......... .......... .......... .......... 572 GTAGATGGAA ATATTTGTTT ATAGGCGGCT CTTAGAACAT TTTCAAGCTA AATGATGTTA 10914 .......... .......... .......... .......... .......... .......... 572 GCTGCACGTG CTACTTGACA CAATGCCAAA AGATTAAATT GAGCAAAATT TATATTTTTA 10854 .......... .......... .......... .......... .......... .......... 572 TTAAAAAAAA TTATATTTAT AAACGTAGAA AATTCACTAT TTTTTTTTTA TCATTAACAT 10794 .......... .......... .......... .......... .......... .......... 572 GTTTTACATA TTTTAGAGGA TTAAGAGTGA AAAAGATTCT AATAACTTGT TAACTTGATA 10734 .......... .......... .......... .......... .......... .......... 572 TAATAGATTA ACAAGTTGAT TATATCGCAC TCTAAAGAAT AAAATGAATT GTCAAAAATA 10674 .......... .......... .......... .......... .......... .......... 572 ATATTAATAA TTTATCGCCA CTCAAAAAAA TAAAAAATAT TGTAGAACGT GACTTTATCA 10614 .......... .......... .......... .......... .......... .......... 572 ATACTAATCT CTTTTAAAAC AACGATTGAT TTGAACTTCA CCGAAATTGA TGGAATGAAA 10554 .......... .......... .......... .......... .......... .......... 572 TGACTAAATA TTGTATTGGG ATAAAATAAT GGGATAATTG TATATAATAG CAAACTAATA 10494 .......... .......... .......... .......... .......... .......... 572 ACCTAAAATA AATGGAGTAG CTATGATTTG ATTTAATTGT GCACCATAGC AAACGTTAGC 10434 .......... .......... .......... .......... .......... .......... 572 CAAAGTTTGT CAGTCGCCTC TCTCTCTTTA TACACAAAAG TGTATAAATT GTGTTTCTGT 10374 .......... .......... .......... .......... .......... .......... 572 TTTGTATAAG CGAGAGAAAA CTGTATATAC ACATGCAAAA ACATATATCT TCGTGTTATA 10314 .......... .......... .......... .......... .......... .......... 572 CACTTAATTA TACAATTTAC AAATATTTTA CTTCAATTCA ATTGTAGACA AATGCAAATT 10254 .......... .......... .......... .......... .......... .......... 572 TTATACAAAT ATTGCAGCGA AAAAG 10229 || | ||| .......... .......GGA ATAAG 580 hqPGS_C08HBa0235H18.1-_SGN-E390304- (11809 11330) ******************************************************************************** EST sequence 101 -strand 671 n (File: SGN-E213158-) 1 AGTACGCCTT GGACCAGTTT AGCAACTTAG ATTTTTGGGA CATTTCTTTA GTCGATGGAT 61 TTAATATTCC AATGACTTTT GCCCCAACAA AACCTAGTGG AGGAAAATGT CACGCAATTC 121 ATTGCACGGC CAATATAAAT GGTGAATGTC CTCGCGCCCT TAAGGTACCT GGAGGATGTA 181 ACAACCCTTG TACCACGTTT GGAGGACAAC AATATTGTTG CACCCAAGGT CCATGTGGCC 241 CTACAGAGTT GTCCAAATTT TTCAAGAAAA GATGTCCCGA TGCTTATAGC TACCCACAAG 301 ACGATCCTAC AAGCACATTT ACTTGCCCTG GTGGTAGTAC AAACTATAGG GTTGTCTTTT 361 GTCCTAATGG TGTTGCTGAT CCAAATTTCC CCTTGGAGAT GCCTGCAAGT ACTGATGAAG 421 TGGCCAAGTG AATTTGAGTT TCTTCATTTT AAATCGCCTC AATTAGTCAA CTGATCTCTA 481 CCGTAATGAA AAATCTTAAT AGCTCAGTTT TTTAAATATT CACTTTTACT TTATTGATAA 541 GAGTTCGTAA CAAACTTAAA GACCGGAATA AGAGTTACAT CTCATGTGTA CTTTTGTCTT 601 AGATGTATAA AACAACAGTG CATTTGAATT AAAAAAAAAA AAAAAAAAAA AAAAACTCGA 661 GACTAGTTCT C Predicted gene structure (within gDNA segment 12411 to 8119): Exon 1 11801 11330 ( 472 n); cDNA 1 475 ( 475 n); score: 0.870 Intron 1 11329 11170 ( 160 n); Pd: 0.000 (s: 0.74), Pa: 0.000 (s: 0.54) Exon 2 11169 11078 ( 92 n); cDNA 476 564 ( 89 n); score: 0.603 Intron 2 11077 10237 ( 841 n); Pd: 0.000 (s: 0.64), Pa: 0.958 (s: 0) Exon 3 10236 10229 ( 8 n); cDNA 565 572 ( 8 n); score: 0.750 PPA cDNA 631 656 MATCH C08HBa0235H18.1- SGN-E213158- 0.826 572 0.852 C PGS_C08HBa0235H18.1-_SGN-E213158- (11801 11330,11169 11078,10236 10229) Alignment (genomic DNA sequence = upper lines): AGTACGCCTT GGACCAGTTT AGCAACCTAG ATTTCTGGGA CATTTCTTTA GTCGATGGAT 11742 |||||||||| |||||||||| |||||| ||| |||| ||||| |||||||||| |||||||||| AGTACGCCTT GGACCAGTTT AGCAACTTAG ATTTTTGGGA CATTTCTTTA GTCGATGGAT 60 TTAATATTCC AATGACTTTC GCCCCGACCA ATCCTAGTGG AGGGAAATGC CATGCAATTC 11682 |||||||||| ||||||||| ||||| || | | |||||||| ||| ||||| || ||||||| TTAATATTCC AATGACTTTT GCCCCAACAA AACCTAGTGG AGGAAAATGT CACGCAATTC 120 ATTGTACGGC TAATATAAAT GGTGAATGTC CTGGTTCACT TAGGGTACCC GGAGGATGTA 11622 |||| ||||| ||||||||| |||||||||| || | | || || |||||| |||||||||| ATTGCACGGC CAATATAAAT GGTGAATGTC CTCGCGCCCT TAAGGTACCT GGAGGATGTA 180 ACAATCCTTG TACCACGTTC GGAGGACAAC AATATTGTTG CACACAAGGT CCATGTGGCC 11562 |||| ||||| ||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| ACAACCCTTG TACCACGTTT GGAGGACAAC AATATTGTTG CACCCAAGGT CCATGTGGCC 240 CTACTGATTT GTCGAGATTT TTCAAACAAA GATGTCCTGA TGCGTATAGC TACCCACAAG 11502 |||| || || ||| | |||| ||||| ||| ||||||| || ||| |||||| |||||||||| CTACAGAGTT GTCCAAATTT TTCAAGAAAA GATGTCCCGA TGCTTATAGC TACCCACAAG 300 ATGATCCTAC TAGCACATTT ACTTGCCCTA GTGGTAGTAC AAATTATAGG GTTGTTTTTT 11442 | |||||||| ||||||||| ||||||||| |||||||||| ||| |||||| ||||| |||| ACGATCCTAC AAGCACATTT ACTTGCCCTG GTGGTAGTAC AAACTATAGG GTTGTCTTTT 360 GTCCTAATGG TGTTACTAGC CCAAATTTCC CCTTGGAGAT GCCCTCAAG- --TGATGAAG 11385 |||||||||| |||| || |||||||||| |||||||||| ||| |||| |||||||| GTCCTAATGG TGTTGCTGAT CCAAATTTCC CCTTGGAGAT GCCTGCAAGT ACTGATGAAG 420 AGGCTAAGTA AAATTGAGTC ACTTTCTTTT AAATTGCTTG AAGTAGTCGA GTTATATAAT 11325 ||| |||| || |||||| ||| |||| |||| || | || ||||| | | || TGGCCAAGTG AATTTGAGTT TCTTCATTTT AAATCGCCTC AATTAGTCAA CTGAT..... 475 TGGCTTGTAA TAAACCTAAT ATAATTACAT GAATAAAAGT CACATCATCA CAAATATGTT 11265 .......... .......... .......... .......... .......... .......... 475 GTTTCGAATA TTATTTTATG TATATTTTGT TATTTACGTA TTAACTTGTC AAATAAAAGA 11205 .......... .......... .......... .......... .......... .......... 475 ATAATATCAG TCAGTTTAAA AACATAAAAA CTATAATATA CTGGATAAGA TAAATAAGAA 11145 | || | | | | || |||| || .......... .......... .......... .....CTCTA CCGTA-ATGA AAAATCTTAA 499 CATCTCACGA GATTATTTTA TCTCATTT-T TTTATATGAT AAAAGTTCCA TCACAAAATA 11086 | |||| ||| | || | ||| ||||| |||| || |||| | | ||||| | TAGCTCAGTT TTTTAAATAT TCACTTTTAC TTTAT-TGAT AAGAGTT-CG TAACAAACT- 556 TAAAAATAAA ATAAATTAAT CTCAAAAGTA ACTAGTACCT TAAAATAATA TAAAATAAAA 11026 |||| | TAAAGACC.. .......... .......... .......... .......... .......... 564 TAATCCCATT TTATTAGAAA TTATTATCCA CAATTTTAGG GCAAAGTCAA AAGTAGATGG 10966 .......... .......... .......... .......... .......... .......... 564 AAATATTTGT TTATAGGCGG CTCTTAGAAC ATTTTCAAGC TAAATGATGT TAGCTGCACG 10906 .......... .......... .......... .......... .......... .......... 564 TGCTACTTGA CACAATGCCA AAAGATTAAA TTGAGCAAAA TTTATATTTT TATTAAAAAA 10846 .......... .......... .......... .......... .......... .......... 564 AATTATATTT ATAAACGTAG AAAATTCACT ATTTTTTTTT TATCATTAAC ATGTTTTACA 10786 .......... .......... .......... .......... .......... .......... 564 TATTTTAGAG GATTAAGAGT GAAAAAGATT CTAATAACTT GTTAACTTGA TATAATAGAT 10726 .......... .......... .......... .......... .......... .......... 564 TAACAAGTTG ATTATATCGC ACTCTAAAGA ATAAAATGAA TTGTCAAAAA TAATATTAAT 10666 .......... .......... .......... .......... .......... .......... 564 AATTTATCGC CACTCAAAAA AATAAAAAAT ATTGTAGAAC GTGACTTTAT CAATACTAAT 10606 .......... .......... .......... .......... .......... .......... 564 CTCTTTTAAA ACAACGATTG ATTTGAACTT CACCGAAATT GATGGAATGA AATGACTAAA 10546 .......... .......... .......... .......... .......... .......... 564 TATTGTATTG GGATAAAATA ATGGGATAAT TGTATATAAT AGCAAACTAA TAACCTAAAA 10486 .......... .......... .......... .......... .......... .......... 564 TAAATGGAGT AGCTATGATT TGATTTAATT GTGCACCATA GCAAACGTTA GCCAAAGTTT 10426 .......... .......... .......... .......... .......... .......... 564 GTCAGTCGCC TCTCTCTCTT TATACACAAA AGTGTATAAA TTGTGTTTCT GTTTTGTATA 10366 .......... .......... .......... .......... .......... .......... 564 AGCGAGAGAA AACTGTATAT ACACATGCAA AAACATATAT CTTCGTGTTA TACACTTAAT 10306 .......... .......... .......... .......... .......... .......... 564 TATACAATTT ACAAATATTT TACTTCAATT CAATTGTAGA CAAATGCAAA TTTTATACAA 10246 .......... .......... .......... .......... .......... .......... 564 ATATTGCAGC GAAAAAG 10229 ||| ||| .........G GAATAAG 572 hqPGS_C08HBa0235H18.1-_SGN-E213158- (11801 11330) ******************************************************************************** EST sequence 907 +strand 633 n (File: SGN-E274599+) 1 CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG GATTTAATAT 61 TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA TTCATTGCAC 121 GGCCAATATA AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT GTAACAACCC 181 TTGTACCACG TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG GCCCTACAGA 241 GTTGTCCAAA TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC AAGACGATCC 301 TACAAGCACA TTTACTTGCC CTGGTGGTAG TACAAACTAT AGGGTTGTCT TTTGTCCTAA 361 TGGTGTTGCT GATCCAAATT TCCCCTTGGA GATGCCTGCA AGTACTGATG AAGTGGCCAA 421 GTGAATTTGA GTTTCTTCAT TTTAAATCGC CTCAATTAGT CAACTGATCT CTACCGTAAT 481 GAAAAATCTT AATAGCTCAG TTTTTTAAAT ATTCACTTTT ACTTTATTGA TAAGAGTTCG 541 TAACAAACTT AAAGACCGGA ATAAGAGTTA CATCTCATGT GTACTTTTGT CTTAGATGTA 601 TAAAACAACA GTGCATTTGA ATTAAAAAAA AAA Predicted gene structure (within gDNA segment 12394 to 8419): Exon 1 11794 11330 ( 465 n); cDNA 1 468 ( 468 n); score: 0.868 Intron 1 11329 11170 ( 160 n); Pd: 0.000 (s: 0.74), Pa: 0.000 (s: 0.54) Exon 2 11169 11089 ( 81 n); cDNA 469 547 ( 79 n); score: 0.611 Intron 2 11088 10237 ( 852 n); Pd: 0.000 (s: 0.60), Pa: 0.958 (s: 0) Exon 3 10236 10229 ( 8 n); cDNA 548 554 ( 7 n); score: 0.625 PPA cDNA 624 633 MATCH C08HBa0235H18.1- SGN-E274599+ 0.830 554 0.875 C PGS_C08HBa0235H18.1-_SGN-E274599+ (11794 11330,11169 11089,10236 10229) Alignment (genomic DNA sequence = upper lines): CTTGGACCAG TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG GATTTAATAT 11735 |||||||||| ||||||||| ||||||| || |||||||||| |||||||||| |||||||||| CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG GATTTAATAT 60 TCCAATGACT TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA TTCATTGTAC 11675 |||||||||| || ||||| | | || ||||| |||||| ||| || || |||| ||||||| || TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA TTCATTGCAC 120 GGCTAATATA AATGGTGAAT GTCCTGGTTC ACTTAGGGTA CCCGGAGGAT GTAACAATCC 11615 ||| |||||| |||||||||| ||||| | | |||| |||| || ||||||| ||||||| || GGCCAATATA AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT GTAACAACCC 180 TTGTACCACG TTCGGAGGAC AACAATATTG TTGCACACAA GGTCCATGTG GCCCTACTGA 11555 |||||||||| || ||||||| |||||||||| |||||| ||| |||||||||| ||||||| || TTGTACCACG TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG GCCCTACAGA 240 TTTGTCGAGA TTTTTCAAAC AAAGATGTCC TGATGCGTAT AGCTACCCAC AAGATGATCC 11495 ||||| | | |||||||| |||||||||| ||||| ||| |||||||||| |||| ||||| GTTGTCCAAA TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC AAGACGATCC 300 TACTAGCACA TTTACTTGCC CTAGTGGTAG TACAAATTAT AGGGTTGTTT TTTGTCCTAA 11435 ||| |||||| |||||||||| || ||||||| |||||| ||| |||||||| | |||||||||| TACAAGCACA TTTACTTGCC CTGGTGGTAG TACAAACTAT AGGGTTGTCT TTTGTCCTAA 360 TGGTGTTACT AGCCCAAATT TCCCCTTGGA GATGCCCTCA AG---TGATG AAGAGGCTAA 11378 ||||||| || ||||||| |||||||||| |||||| || || ||||| ||| ||| || TGGTGTTGCT GATCCAAATT TCCCCTTGGA GATGCCTGCA AGTACTGATG AAGTGGCCAA 420 GTAAAATTGA GTCACTTTCT TTTAAATTGC TTGAAGTAGT CGAGTTATAT AATTGGCTTG 11318 || || |||| || ||| | ||||||| || | || |||| | | | || GTGAATTTGA GTTTCTTCAT TTTAAATCGC CTCAATTAGT CAACTGAT.. .......... 468 TAATAAACCT AATATAATTA CATGAATAAA AGTCACATCA TCACAAATAT GTTGTTTCGA 11258 .......... .......... .......... .......... .......... .......... 468 ATATTATTTT ATGTATATTT TGTTATTTAC GTATTAACTT GTCAAATAAA AGAATAATAT 11198 .......... .......... .......... .......... .......... .......... 468 CAGTCAGTTT AAAAACATAA AAACTATAAT ATACTGGATA AGATAAATAA GAACATCTCA 11138 | ||| | | | || |||| || | |||| .......... .......... ........CT CTACCGTA-A TGAAAAATCT TAATAGCTCA 499 CGAGATTATT TTATCTCATT T-TTTTATAT GATAAAAGTT CCATCACAAA ATATAAAAAT 11079 ||| | || | || | ||||| | ||||| |||| | | ||||| GTTTTTTAAA TATTCACTTT TACTTTAT-T GATAAGAGTT -CGTAACAAA .......... 547 AAAATAAATT AATCTCAAAA GTAACTAGTA CCTTAAAATA ATATAAAATA AAATAATCCC 11019 .......... .......... .......... .......... .......... .......... 547 ATTTTATTAG AAATTATTAT CCACAATTTT AGGGCAAAGT CAAAAGTAGA TGGAAATATT 10959 .......... .......... .......... .......... .......... .......... 547 TGTTTATAGG CGGCTCTTAG AACATTTTCA AGCTAAATGA TGTTAGCTGC ACGTGCTACT 10899 .......... .......... .......... .......... .......... .......... 547 TGACACAATG CCAAAAGATT AAATTGAGCA AAATTTATAT TTTTATTAAA AAAAATTATA 10839 .......... .......... .......... .......... .......... .......... 547 TTTATAAACG TAGAAAATTC ACTATTTTTT TTTTATCATT AACATGTTTT ACATATTTTA 10779 .......... .......... .......... .......... .......... .......... 547 GAGGATTAAG AGTGAAAAAG ATTCTAATAA CTTGTTAACT TGATATAATA GATTAACAAG 10719 .......... .......... .......... .......... .......... .......... 547 TTGATTATAT CGCACTCTAA AGAATAAAAT GAATTGTCAA AAATAATATT AATAATTTAT 10659 .......... .......... .......... .......... .......... .......... 547 CGCCACTCAA AAAAATAAAA AATATTGTAG AACGTGACTT TATCAATACT AATCTCTTTT 10599 .......... .......... .......... .......... .......... .......... 547 AAAACAACGA TTGATTTGAA CTTCACCGAA ATTGATGGAA TGAAATGACT AAATATTGTA 10539 .......... .......... .......... .......... .......... .......... 547 TTGGGATAAA ATAATGGGAT AATTGTATAT AATAGCAAAC TAATAACCTA AAATAAATGG 10479 .......... .......... .......... .......... .......... .......... 547 AGTAGCTATG ATTTGATTTA ATTGTGCACC ATAGCAAACG TTAGCCAAAG TTTGTCAGTC 10419 .......... .......... .......... .......... .......... .......... 547 GCCTCTCTCT CTTTATACAC AAAAGTGTAT AAATTGTGTT TCTGTTTTGT ATAAGCGAGA 10359 .......... .......... .......... .......... .......... .......... 547 GAAAACTGTA TATACACATG CAAAAACATA TATCTTCGTG TTATACACTT AATTATACAA 10299 .......... .......... .......... .......... .......... .......... 547 TTTACAAATA TTTTACTTCA ATTCAATTGT AGACAAATGC AAATTTTATA CAAATATTGC 10239 .......... .......... .......... .......... .......... .......... 547 AGCGAAAAAG 10229 | |||| ..C-TTAAAG 554 hqPGS_C08HBa0235H18.1-_SGN-E274599+ (11794 11330) ******************************************************************************** EST sequence 220 -strand 654 n (File: SGN-E375346-) 1 TTTGGGACAT TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC 61 CTAGTGGAGG AAAATGTCAC GCAATTCATT GCCCGGCCAA TATAAATGGT GAATGTCCTC 121 GCGCCCTTAA GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT 181 ATTGTTGCAC CCAAGGTCCA TGTGGCCCTA CAAAGTTGTC CAAATTTTTC AAAAAAAAAT 241 GTCCCGATGC TTATAGCTAC CCCCAAAACG ATCCTACAAG CACATTTACT TGCCCTGGTG 301 GTAGTACAAA CTATAGGGGT GTCTTTTGTC CTAAAGGGGT TGCTGATCCA AATTTCCCCT 361 TGGAAATGCC TGCAAGTACT GATGAAGTGG CCAAGTGAAT TTGAGTTTTT TCATTTTAAA 421 TCCCCTCAAT TAGTCAACTG ATTTTTACCG TAATGAAAAA TTTTAATAGC TCAGTTTTTT 481 AAATATTCCC TTTTACTTTA TTGATAAAAG TTTGTAACAA ACTTAAAGAC CGGAATAAAA 541 GTTACATTTC ATGTGGACTT TTGTTTTAAA TGTATAAAAC AACAGTGCAT TTGAATTTTC 601 GTTTTTTTTT TTTTTAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAA Predicted gene structure (within gDNA segment 12396 to 6528): Exon 1 11766 11330 ( 437 n); cDNA 3 442 ( 440 n); score: 0.841 Intron 1 11329 11170 ( 160 n); Pd: 0.000 (s: 0.70), Pa: 0.000 (s: 0.54) Exon 2 11169 11079 ( 91 n); cDNA 443 530 ( 88 n); score: 0.610 Intron 2 11078 10237 ( 842 n); Pd: 0.000 (s: 0.66), Pa: 0.958 (s: 0) Exon 3 10236 10232 ( 5 n); cDNA 531 535 ( 5 n); score: 0.800 PPA cDNA 616 654 MATCH C08HBa0235H18.1- SGN-E375346- 0.801 533 0.815 C PGS_C08HBa0235H18.1-_SGN-E375346- (11766 11330,11169 11079,10236 10232) Alignment (genomic DNA sequence = upper lines): TGGGACATTT CTTTAGTCGA TGGATTTAAT ATTCCAATGA CTTTCGCCCC GACCAATCCT 11707 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| || || ||| TGGGACATTT CTTTAGTCGA TGGATTTAAT ATTCCAATGA CTTTTGCCCC AACAAAACCT 62 AGTGGAGGGA AATGCCATGC AATTCATTGT ACGGCTAATA TAAATGGTGA ATGTCCTGGT 11647 |||||||| | |||| || || ||||||||| |||| |||| |||||||||| ||||||| | AGTGGAGGAA AATGTCACGC AATTCATTGC CCGGCCAATA TAAATGGTGA ATGTCCTCGC 122 TCACTTAGGG TACCCGGAGG ATGTAACAAT CCTTGTACCA CGTTCGGAGG ACAACAATAT 11587 | |||| || |||| ||||| ||||||||| |||||||||| |||| ||||| |||||||||| GCCCTTAAGG TACCTGGAGG ATGTAACAAC CCTTGTACCA CGTTTGGAGG ACAACAATAT 182 TGTTGCACAC AAGGTCCATG TGGCCCTACT GATTTGTCGA GATTTTTCAA ACAAAGATGT 11527 |||||||| | |||||||||| ||||||||| | ||||| | ||||||||| | ||| |||| TGTTGCACCC AAGGTCCATG TGGCCCTACA AAGTTGTCCA AATTTTTCAA AAAAAAATGT 242 CCTGATGCGT ATAGCTACCC ACAAGATGAT CCTACTAGCA CATTTACTTG CCCTAGTGGT 11467 || ||||| | |||||||||| ||| | ||| ||||| |||| |||||||||| |||| ||||| CCCGATGCTT ATAGCTACCC CCAAAACGAT CCTACAAGCA CATTTACTTG CCCTGGTGGT 302 AGTACAAATT ATAGGGTTGT TTTTTGTCCT AATGGTGTTA CTAGCCCAAA TTTCCCCTTG 11407 |||||||| | |||||| ||| ||||||||| || || ||| || ||||| |||||||||| AGTACAAACT ATAGGGGTGT CTTTTGTCCT AAAGGGGTTG CTGATCCAAA TTTCCCCTTG 362 GAGATGCCCT CAAG---TGA TGAAGAGGCT AAGTAAAATT GAGTCACTTT CTTTTAAATT 11350 || ||||| |||| ||| ||||| ||| |||| || || |||| || |||||||| GAAATGCCTG CAAGTACTGA TGAAGTGGCC AAGTGAATTT GAGTTTTTTC ATTTTAAATC 422 GCTTGAAGTA GTCGAGTTAT ATAATTGGCT TGTAATAAAC CTAATATAAT TACATGAATA 11290 | | || || ||| | | || CCCTCAATTA GTCAACTGAT .......... .......... .......... .......... 442 AAAGTCACAT CATCACAAAT ATGTTGTTTC GAATATTATT TTATGTATAT TTTGTTATTT 11230 .......... .......... .......... .......... .......... .......... 442 ACGTATTAAC TTGTCAAATA AAAGAATAAT ATCAGTCAGT TTAAAAACAT AAAAACTATA 11170 .......... .......... .......... .......... .......... .......... 442 ATATACTGGA TAAGATAAAT AAGAACATCT CACGAGATTA TTTTATCTCA TTT-TTTTAT 11111 | ||| | | | || |||| || | || || ||| | || | ||| ||||| TTTTACCGTA -ATGAAAAAT TTTAATAGCT CAGTTTTTTA AATATTCCCT TTTACTTTAT 501 ATGATAAAAG TTCCATCACA AAATATAAAA ATAAAATAAA TTAATCTCAA AAGTAACTAG 11051 ||||||||| || | ||| || | |||| | -TGATAAAAG TT-TGTAACA AACT-TAAAG AC........ .......... .......... 530 TACCTTAAAA TAATATAAAA TAAAATAATC CCATTTTATT AGAAATTATT ATCCACAATT 10991 .......... .......... .......... .......... .......... .......... 530 TTAGGGCAAA GTCAAAAGTA GATGGAAATA TTTGTTTATA GGCGGCTCTT AGAACATTTT 10931 .......... .......... .......... .......... .......... .......... 530 CAAGCTAAAT GATGTTAGCT GCACGTGCTA CTTGACACAA TGCCAAAAGA TTAAATTGAG 10871 .......... .......... .......... .......... .......... .......... 530 CAAAATTTAT ATTTTTATTA AAAAAAATTA TATTTATAAA CGTAGAAAAT TCACTATTTT 10811 .......... .......... .......... .......... .......... .......... 530 TTTTTTATCA TTAACATGTT TTACATATTT TAGAGGATTA AGAGTGAAAA AGATTCTAAT 10751 .......... .......... .......... .......... .......... .......... 530 AACTTGTTAA CTTGATATAA TAGATTAACA AGTTGATTAT ATCGCACTCT AAAGAATAAA 10691 .......... .......... .......... .......... .......... .......... 530 ATGAATTGTC AAAAATAATA TTAATAATTT ATCGCCACTC AAAAAAATAA AAAATATTGT 10631 .......... .......... .......... .......... .......... .......... 530 AGAACGTGAC TTTATCAATA CTAATCTCTT TTAAAACAAC GATTGATTTG AACTTCACCG 10571 .......... .......... .......... .......... .......... .......... 530 AAATTGATGG AATGAAATGA CTAAATATTG TATTGGGATA AAATAATGGG ATAATTGTAT 10511 .......... .......... .......... .......... .......... .......... 530 ATAATAGCAA ACTAATAACC TAAAATAAAT GGAGTAGCTA TGATTTGATT TAATTGTGCA 10451 .......... .......... .......... .......... .......... .......... 530 CCATAGCAAA CGTTAGCCAA AGTTTGTCAG TCGCCTCTCT CTCTTTATAC ACAAAAGTGT 10391 .......... .......... .......... .......... .......... .......... 530 ATAAATTGTG TTTCTGTTTT GTATAAGCGA GAGAAAACTG TATATACACA TGCAAAAACA 10331 .......... .......... .......... .......... .......... .......... 530 TATATCTTCG TGTTATACAC TTAATTATAC AATTTACAAA TATTTTACTT CAATTCAATT 10271 .......... .......... .......... .......... .......... .......... 530 GTAGACAAAT GCAAATTTTA TACAAATATT GCAGCGAAA 10232 || || .......... .......... .......... ....CGGAA 535 hqPGS_C08HBa0235H18.1-_SGN-E375346- (11766 11330) ******************************************************************************** EST sequence 783 +strand 589 n (File: SGN-E254748+) 1 ACTTTTGCCC CAACAAAACC TAGTGGAGGA AAATGTCACG CAATTCATTG CACGGCCAAT 61 ATAAATGGTG AATGTCCTCG CGCCCTTAAA GTACCTGGAG GATGTAACAA CCCTTGTACC 121 ACGTTTGGAG GACAACAATA TTGTTGCACC CAAGGTCCAT GTGGCCCTAC AGAGTTGTCC 181 AAATTTTTCA AGAAAAGATG TCCCGATGCT TATAGCTACC CACAAGACGA TCCTACAAGC 241 ACATTTACTT GCCCTGGTGG TAGTACAAAC TATAGGGTTG TCTTTTGTCC TAATGGTGTT 301 GCTGATCCAA ATTTCCCCTT GGAGATGCCT GCAAGTACTG ATGAAGTGGC CAAGTGAATT 361 TGAGTTTCTT CATTTTAAAT CGCCTCAATT AGTCAACTGA TCTCTACCGT AATGAAAAAT 421 CTTAATAGCT CAGTTTTTTA AATATTCACT TTTACTTTAT TGATAAGAGT TCGTAACAAA 481 CTTAAAGACC GGAATAAGAG TTACATCTCA TGTGTACTTT TGTCTTAGAT GTATAAAACA 541 ACAGTGCATT TGAATTAAAN AAAAAAAAAN AAAAANAAAA AAAAAAAAA Predicted gene structure (within gDNA segment 13461 to 8189): Exon 1 11727 11330 ( 398 n); cDNA 1 401 ( 401 n); score: 0.848 Intron 1 11329 11170 ( 160 n); Pd: 0.000 (s: 0.74), Pa: 0.000 (s: 0.54) Exon 2 11169 11078 ( 92 n); cDNA 402 490 ( 89 n); score: 0.603 Intron 2 11077 10237 ( 841 n); Pd: 0.000 (s: 0.64), Pa: 0.958 (s: 0) Exon 3 10236 10229 ( 8 n); cDNA 491 498 ( 8 n); score: 0.750 PPA cDNA 557 569 MATCH C08HBa0235H18.1- SGN-E254748+ 0.802 498 0.846 C PGS_C08HBa0235H18.1-_SGN-E254748+ (11727 11330,11169 11078,10236 10229) Alignment (genomic DNA sequence = upper lines): ACTTTCGCCC CGACCAATCC TAGTGGAGGG AAATGCCATG CAATTCATTG TACGGCTAAT 11668 ||||| |||| | || || || ||||||||| ||||| || | |||||||||| ||||| ||| ACTTTTGCCC CAACAAAACC TAGTGGAGGA AAATGTCACG CAATTCATTG CACGGCCAAT 60 ATAAATGGTG AATGTCCTGG TTCACTTAGG GTACCCGGAG GATGTAACAA TCCTTGTACC 11608 |||||||||| |||||||| | | |||| ||||| |||| |||||||||| ||||||||| ATAAATGGTG AATGTCCTCG CGCCCTTAAA GTACCTGGAG GATGTAACAA CCCTTGTACC 120 ACGTTCGGAG GACAACAATA TTGTTGCACA CAAGGTCCAT GTGGCCCTAC TGATTTGTCG 11548 ||||| |||| |||||||||| ||||||||| |||||||||| |||||||||| || ||||| ACGTTTGGAG GACAACAATA TTGTTGCACC CAAGGTCCAT GTGGCCCTAC AGAGTTGTCC 180 AGATTTTTCA AACAAAGATG TCCTGATGCG TATAGCTACC CACAAGATGA TCCTACTAGC 11488 | |||||||| | ||||||| ||| ||||| |||||||||| ||||||| || |||||| ||| AAATTTTTCA AGAAAAGATG TCCCGATGCT TATAGCTACC CACAAGACGA TCCTACAAGC 240 ACATTTACTT GCCCTAGTGG TAGTACAAAT TATAGGGTTG TTTTTTGTCC TAATGGTGTT 11428 |||||||||| ||||| |||| ||||||||| |||||||||| | |||||||| |||||||||| ACATTTACTT GCCCTGGTGG TAGTACAAAC TATAGGGTTG TCTTTTGTCC TAATGGTGTT 300 ACTAGCCCAA ATTTCCCCTT GGAGATGCCC TCAAG---TG ATGAAGAGGC TAAGTAAAAT 11371 || |||| |||||||||| ||||||||| |||| || |||||| ||| |||| || | GCTGATCCAA ATTTCCCCTT GGAGATGCCT GCAAGTACTG ATGAAGTGGC CAAGTGAATT 360 TGAGTCACTT TCTTTTAAAT TGCTTGAAGT AGTCGAGTTA TATAATTGGC TTGTAATAAA 11311 ||||| ||| |||||||| || | || | |||| | | | | TGAGTTTCTT CATTTTAAAT CGCCTCAATT AGTCAACTGA T......... .......... 401 CCTAATATAA TTACATGAAT AAAAGTCACA TCATCACAAA TATGTTGTTT CGAATATTAT 11251 .......... .......... .......... .......... .......... .......... 401 TTTATGTATA TTTTGTTATT TACGTATTAA CTTGTCAAAT AAAAGAATAA TATCAGTCAG 11191 .......... .......... .......... .......... .......... .......... 401 TTTAAAAACA TAAAAACTAT AATATACTGG ATAAGATAAA TAAGAACATC TCACGAGATT 11131 | ||| | | | || ||| | || | | ||| || .......... .......... .CTCTACCGT A-ATGAAAAA TCTTAATAGC TCAGTTTTTT 439 ATTTTATCTC ATTT-TTTTA TATGATAAAA GTTCCATCAC AAAATATAAA AATAAAATAA 11072 | | || | ||| |||| | |||||| | ||| | | || ||| | |||| | AAATATTCAC TTTTACTTTA T-TGATAAGA GTT-CGTAAC AAACT-TAAA GACC...... 490 ATTAATCTCA AAAGTAACTA GTACCTTAAA ATAATATAAA ATAAAATAAT CCCATTTTAT 11012 .......... .......... .......... .......... .......... .......... 490 TAGAAATTAT TATCCACAAT TTTAGGGCAA AGTCAAAAGT AGATGGAAAT ATTTGTTTAT 10952 .......... .......... .......... .......... .......... .......... 490 AGGCGGCTCT TAGAACATTT TCAAGCTAAA TGATGTTAGC TGCACGTGCT ACTTGACACA 10892 .......... .......... .......... .......... .......... .......... 490 ATGCCAAAAG ATTAAATTGA GCAAAATTTA TATTTTTATT AAAAAAAATT ATATTTATAA 10832 .......... .......... .......... .......... .......... .......... 490 ACGTAGAAAA TTCACTATTT TTTTTTTATC ATTAACATGT TTTACATATT TTAGAGGATT 10772 .......... .......... .......... .......... .......... .......... 490 AAGAGTGAAA AAGATTCTAA TAACTTGTTA ACTTGATATA ATAGATTAAC AAGTTGATTA 10712 .......... .......... .......... .......... .......... .......... 490 TATCGCACTC TAAAGAATAA AATGAATTGT CAAAAATAAT ATTAATAATT TATCGCCACT 10652 .......... .......... .......... .......... .......... .......... 490 CAAAAAAATA AAAAATATTG TAGAACGTGA CTTTATCAAT ACTAATCTCT TTTAAAACAA 10592 .......... .......... .......... .......... .......... .......... 490 CGATTGATTT GAACTTCACC GAAATTGATG GAATGAAATG ACTAAATATT GTATTGGGAT 10532 .......... .......... .......... .......... .......... .......... 490 AAAATAATGG GATAATTGTA TATAATAGCA AACTAATAAC CTAAAATAAA TGGAGTAGCT 10472 .......... .......... .......... .......... .......... .......... 490 ATGATTTGAT TTAATTGTGC ACCATAGCAA ACGTTAGCCA AAGTTTGTCA GTCGCCTCTC 10412 .......... .......... .......... .......... .......... .......... 490 TCTCTTTATA CACAAAAGTG TATAAATTGT GTTTCTGTTT TGTATAAGCG AGAGAAAACT 10352 .......... .......... .......... .......... .......... .......... 490 GTATATACAC ATGCAAAAAC ATATATCTTC GTGTTATACA CTTAATTATA CAATTTACAA 10292 .......... .......... .......... .......... .......... .......... 490 ATATTTTACT TCAATTCAAT TGTAGACAAA TGCAAATTTT ATACAAATAT TGCAGCGAAA 10232 ||| .......... .......... .......... .......... .......... .....GGAAT 495 AAG 10229 ||| AAG 498 hqPGS_C08HBa0235H18.1-_SGN-E254748+ (11727 11330) ******************************************************************************** EST sequence 861 +strand 555 n (File: SGN-E214114+) 1 CAAAACCTAG TGGAGGAAAA TGTCACGCAA TTCATTGCAC GGCCAATATA AATGGTGAAT 61 GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT GTAACAACCC TTGTACCACG TTTGGAGGAC 121 AACAATATTG TTGCACCCAA GGTCCATGTG GCCCTACAGA GTTGTCCAAA TTTTTCAAGA 181 AAAGATGTCC CGATGCTTAT AGCTACCCAC AAGACGATCC TACAAGCACA TTTACTTGCC 241 CTGGTGGTAG TACAAACTAT AGGGTTGTCT TTTGTCCTAA TGGTGTTGCT GATCCAAATT 301 TCCCCTTGGA GATGCCTGCA AGTACTGATG AAGTGGCCAA GTGAATTTGA GTTTCTTCAT 361 TTTAAATCGC CTCAATTAGT CAACTGATCT CTACCGTAAT GAAAAATCTT AATAGCTCAG 421 TTTTTTAAAT ATTCACTTTT ACTTTATTGA TAAGAGTTCG TAACAAACTT AAAGACCGGA 481 ATAAGAGTTA CATCTCATGT GTACTTTTGT CTTAGATGTA TAAAACAACA GTGCATTTGA 541 AAAAAAAAAA AAAAA Predicted gene structure (within gDNA segment 13331 to 8399): Exon 1 11712 11330 ( 383 n); cDNA 3 388 ( 386 n); score: 0.852 Intron 1 11329 11170 ( 160 n); Pd: 0.000 (s: 0.74), Pa: 0.000 (s: 0.54) Exon 2 11169 11089 ( 81 n); cDNA 389 467 ( 79 n); score: 0.611 Intron 2 11088 10237 ( 852 n); Pd: 0.000 (s: 0.60), Pa: 0.958 (s: 0) Exon 3 10236 10229 ( 8 n); cDNA 468 474 ( 7 n); score: 0.625 PPA cDNA 540 555 MATCH C08HBa0235H18.1- SGN-E214114+ 0.810 472 0.850 C PGS_C08HBa0235H18.1-_SGN-E214114+ (11712 11330,11169 11089,10236 10229) Alignment (genomic DNA sequence = upper lines): AATCCTAGTG GAGGGAAATG CCATGCAATT CATTGTACGG CTAATATAAA TGGTGAATGT 11653 || ||||||| |||| ||||| || |||||| ||||| |||| | |||||||| |||||||||| AAACCTAGTG GAGGAAAATG TCACGCAATT CATTGCACGG CCAATATAAA TGGTGAATGT 62 CCTGGTTCAC TTAGGGTACC CGGAGGATGT AACAATCCTT GTACCACGTT CGGAGGACAA 11593 ||| | | | ||| |||||| ||||||||| ||||| |||| |||||||||| ||||||||| CCTCGCGCCC TTAAGGTACC TGGAGGATGT AACAACCCTT GTACCACGTT TGGAGGACAA 122 CAATATTGTT GCACACAAGG TCCATGTGGC CCTACTGATT TGTCGAGATT TTTCAAACAA 11533 |||||||||| |||| ||||| |||||||||| ||||| || | |||| | ||| |||||| || CAATATTGTT GCACCCAAGG TCCATGTGGC CCTACAGAGT TGTCCAAATT TTTCAAGAAA 182 AGATGTCCTG ATGCGTATAG CTACCCACAA GATGATCCTA CTAGCACATT TACTTGCCCT 11473 |||||||| | |||| ||||| |||||||||| || ||||||| | |||||||| |||||||||| AGATGTCCCG ATGCTTATAG CTACCCACAA GACGATCCTA CAAGCACATT TACTTGCCCT 242 AGTGGTAGTA CAAATTATAG GGTTGTTTTT TGTCCTAATG GTGTTACTAG CCCAAATTTC 11413 ||||||||| |||| ||||| |||||| ||| |||||||||| ||||| || ||||||||| GGTGGTAGTA CAAACTATAG GGTTGTCTTT TGTCCTAATG GTGTTGCTGA TCCAAATTTC 302 CCCTTGGAGA TGCCCTCAAG ---TGATGAA GAGGCTAAGT AAAATTGAGT CACTTTCTTT 11356 |||||||||| |||| |||| ||||||| | ||| |||| || |||||| ||| ||| CCCTTGGAGA TGCCTGCAAG TACTGATGAA GTGGCCAAGT GAATTTGAGT TTCTTCATTT 362 TAAATTGCTT GAAGTAGTCG AGTTATATAA TTGGCTTGTA ATAAACCTAA TATAATTACA 11296 ||||| || | || ||||| | | || TAAATCGCCT CAATTAGTCA ACTGAT.... .......... .......... .......... 388 TGAATAAAAG TCACATCATC ACAAATATGT TGTTTCGAAT ATTATTTTAT GTATATTTTG 11236 .......... .......... .......... .......... .......... .......... 388 TTATTTACGT ATTAACTTGT CAAATAAAAG AATAATATCA GTCAGTTTAA AAACATAAAA 11176 .......... .......... .......... .......... .......... .......... 388 ACTATAATAT ACTGGATAAG ATAAATAAGA ACATCTCACG AGATTATTTT ATCTCATTT- 11117 | | || | | | | | |||| | | | |||| ||| | || | ||| ......CTCT ACCGTA-ATG AAAAATCTTA ATAGCTCAGT TTTTTAAATA TTCACTTTTA 441 TTTTATATGA TAAAAGTTCC ATCACAAAAT ATAAAAATAA AATAAATTAA TCTCAAAAGT 11057 ||||| ||| ||| |||| | | ||||| CTTTAT-TGA TAAGAGTT-C GTAACAAA.. .......... .......... .......... 467 AACTAGTACC TTAAAATAAT ATAAAATAAA ATAATCCCAT TTTATTAGAA ATTATTATCC 10997 .......... .......... .......... .......... .......... .......... 467 ACAATTTTAG GGCAAAGTCA AAAGTAGATG GAAATATTTG TTTATAGGCG GCTCTTAGAA 10937 .......... .......... .......... .......... .......... .......... 467 CATTTTCAAG CTAAATGATG TTAGCTGCAC GTGCTACTTG ACACAATGCC AAAAGATTAA 10877 .......... .......... .......... .......... .......... .......... 467 ATTGAGCAAA ATTTATATTT TTATTAAAAA AAATTATATT TATAAACGTA GAAAATTCAC 10817 .......... .......... .......... .......... .......... .......... 467 TATTTTTTTT TTATCATTAA CATGTTTTAC ATATTTTAGA GGATTAAGAG TGAAAAAGAT 10757 .......... .......... .......... .......... .......... .......... 467 TCTAATAACT TGTTAACTTG ATATAATAGA TTAACAAGTT GATTATATCG CACTCTAAAG 10697 .......... .......... .......... .......... .......... .......... 467 AATAAAATGA ATTGTCAAAA ATAATATTAA TAATTTATCG CCACTCAAAA AAATAAAAAA 10637 .......... .......... .......... .......... .......... .......... 467 TATTGTAGAA CGTGACTTTA TCAATACTAA TCTCTTTTAA AACAACGATT GATTTGAACT 10577 .......... .......... .......... .......... .......... .......... 467 TCACCGAAAT TGATGGAATG AAATGACTAA ATATTGTATT GGGATAAAAT AATGGGATAA 10517 .......... .......... .......... .......... .......... .......... 467 TTGTATATAA TAGCAAACTA ATAACCTAAA ATAAATGGAG TAGCTATGAT TTGATTTAAT 10457 .......... .......... .......... .......... .......... .......... 467 TGTGCACCAT AGCAAACGTT AGCCAAAGTT TGTCAGTCGC CTCTCTCTCT TTATACACAA 10397 .......... .......... .......... .......... .......... .......... 467 AAGTGTATAA ATTGTGTTTC TGTTTTGTAT AAGCGAGAGA AAACTGTATA TACACATGCA 10337 .......... .......... .......... .......... .......... .......... 467 AAAACATATA TCTTCGTGTT ATACACTTAA TTATACAATT TACAAATATT TTACTTCAAT 10277 .......... .......... .......... .......... .......... .......... 467 TCAATTGTAG ACAAATGCAA ATTTTATACA AATATTGCAG CGAAAAAG 10229 | |||| .......... .......... .......... .......... C-TTAAAG 474 hqPGS_C08HBa0235H18.1-_SGN-E214114+ (11712 11330) ******************************************************************************** EST sequence 238 -strand 528 n (File: SGN-E298580-) 1 AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT GTAACAACCC TTGTACCACG 61 TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG GCCCTACAGA GTTGTCCAAA 121 TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC AAGACGATCC TACAAGCACA 181 TTTACTTGCC CTGGTGGTAG TACAAACTAT AGGGTTGTCT TTTGTCCTAA TGGTGTTGCT 241 GATCCAAATT TCCCCTTGGA GATGCCTGCA AGTACTGATG AAGTGGCCAA GTGAATTTGA 301 GTTTCTTCAT TTTAAATCGC CTCAATTAGT CAACTGATCT CTACCGTAAT GAAAAATCTT 361 AATAGCTCAG TTTTTTAAAT ATTCACTTTT ACTTTATTGA TAAGAGTTCG TAACAAACTT 421 AAAGACCGGA ATAAGAGTTA CATCTCATGT GTACTTTTGT CTTAGATGTA TAAAACAACA 481 GTGCGTTTGC AAAAAAAAAA AAAAAAAAAA AAACTCGAGA CTAGTTCT Predicted gene structure (within gDNA segment 12841 to 8179): Exon 1 11664 11330 ( 335 n); cDNA 1 338 ( 338 n); score: 0.849 Intron 1 11329 11170 ( 160 n); Pd: 0.000 (s: 0.74), Pa: 0.000 (s: 0.54) Exon 2 11169 11078 ( 92 n); cDNA 339 427 ( 89 n); score: 0.603 Intron 2 11077 10237 ( 841 n); Pd: 0.000 (s: 0.64), Pa: 0.958 (s: 0) Exon 3 10236 10229 ( 8 n); cDNA 428 435 ( 8 n); score: 0.750 PPA cDNA 491 514 MATCH C08HBa0235H18.1- SGN-E298580- 0.796 435 0.824 C PGS_C08HBa0235H18.1-_SGN-E298580- (11664 11330,11169 11078,10236 10229) Alignment (genomic DNA sequence = upper lines): AATGGTGAAT GTCCTGGTTC ACTTAGGGTA CCCGGAGGAT GTAACAATCC TTGTACCACG 11605 |||||||||| ||||| | | |||| |||| || ||||||| ||||||| || |||||||||| AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT GTAACAACCC TTGTACCACG 60 TTCGGAGGAC AACAATATTG TTGCACACAA GGTCCATGTG GCCCTACTGA TTTGTCGAGA 11545 || ||||||| |||||||||| |||||| ||| |||||||||| ||||||| || ||||| | | TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG GCCCTACAGA GTTGTCCAAA 120 TTTTTCAAAC AAAGATGTCC TGATGCGTAT AGCTACCCAC AAGATGATCC TACTAGCACA 11485 |||||||| |||||||||| ||||| ||| |||||||||| |||| ||||| ||| |||||| TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC AAGACGATCC TACAAGCACA 180 TTTACTTGCC CTAGTGGTAG TACAAATTAT AGGGTTGTTT TTTGTCCTAA TGGTGTTACT 11425 |||||||||| || ||||||| |||||| ||| |||||||| | |||||||||| ||||||| || TTTACTTGCC CTGGTGGTAG TACAAACTAT AGGGTTGTCT TTTGTCCTAA TGGTGTTGCT 240 AGCCCAAATT TCCCCTTGGA GATGCCCTCA AG---TGATG AAGAGGCTAA GTAAAATTGA 11368 ||||||| |||||||||| |||||| || || ||||| ||| ||| || || || |||| GATCCAAATT TCCCCTTGGA GATGCCTGCA AGTACTGATG AAGTGGCCAA GTGAATTTGA 300 GTCACTTTCT TTTAAATTGC TTGAAGTAGT CGAGTTATAT AATTGGCTTG TAATAAACCT 11308 || ||| | ||||||| || | || |||| | | | || GTTTCTTCAT TTTAAATCGC CTCAATTAGT CAACTGAT.. .......... .......... 338 AATATAATTA CATGAATAAA AGTCACATCA TCACAAATAT GTTGTTTCGA ATATTATTTT 11248 .......... .......... .......... .......... .......... .......... 338 ATGTATATTT TGTTATTTAC GTATTAACTT GTCAAATAAA AGAATAATAT CAGTCAGTTT 11188 .......... .......... .......... .......... .......... .......... 338 AAAAACATAA AAACTATAAT ATACTGGATA AGATAAATAA GAACATCTCA CGAGATTATT 11128 | ||| | | | || |||| || | |||| ||| .......... ........CT CTACCGTA-A TGAAAAATCT TAATAGCTCA GTTTTTTAAA 379 TTATCTCATT T-TTTTATAT GATAAAAGTT CCATCACAAA ATATAAAAAT AAAATAAATT 11069 | || | || | ||||| | ||||| |||| | | ||||| | |||| | TATTCACTTT TACTTTAT-T GATAAGAGTT -CGTAACAAA CT-TAAAGAC C......... 427 AATCTCAAAA GTAACTAGTA CCTTAAAATA ATATAAAATA AAATAATCCC ATTTTATTAG 11009 .......... .......... .......... .......... .......... .......... 427 AAATTATTAT CCACAATTTT AGGGCAAAGT CAAAAGTAGA TGGAAATATT TGTTTATAGG 10949 .......... .......... .......... .......... .......... .......... 427 CGGCTCTTAG AACATTTTCA AGCTAAATGA TGTTAGCTGC ACGTGCTACT TGACACAATG 10889 .......... .......... .......... .......... .......... .......... 427 CCAAAAGATT AAATTGAGCA AAATTTATAT TTTTATTAAA AAAAATTATA TTTATAAACG 10829 .......... .......... .......... .......... .......... .......... 427 TAGAAAATTC ACTATTTTTT TTTTATCATT AACATGTTTT ACATATTTTA GAGGATTAAG 10769 .......... .......... .......... .......... .......... .......... 427 AGTGAAAAAG ATTCTAATAA CTTGTTAACT TGATATAATA GATTAACAAG TTGATTATAT 10709 .......... .......... .......... .......... .......... .......... 427 CGCACTCTAA AGAATAAAAT GAATTGTCAA AAATAATATT AATAATTTAT CGCCACTCAA 10649 .......... .......... .......... .......... .......... .......... 427 AAAAATAAAA AATATTGTAG AACGTGACTT TATCAATACT AATCTCTTTT AAAACAACGA 10589 .......... .......... .......... .......... .......... .......... 427 TTGATTTGAA CTTCACCGAA ATTGATGGAA TGAAATGACT AAATATTGTA TTGGGATAAA 10529 .......... .......... .......... .......... .......... .......... 427 ATAATGGGAT AATTGTATAT AATAGCAAAC TAATAACCTA AAATAAATGG AGTAGCTATG 10469 .......... .......... .......... .......... .......... .......... 427 ATTTGATTTA ATTGTGCACC ATAGCAAACG TTAGCCAAAG TTTGTCAGTC GCCTCTCTCT 10409 .......... .......... .......... .......... .......... .......... 427 CTTTATACAC AAAAGTGTAT AAATTGTGTT TCTGTTTTGT ATAAGCGAGA GAAAACTGTA 10349 .......... .......... .......... .......... .......... .......... 427 TATACACATG CAAAAACATA TATCTTCGTG TTATACACTT AATTATACAA TTTACAAATA 10289 .......... .......... .......... .......... .......... .......... 427 TTTTACTTCA ATTCAATTGT AGACAAATGC AAATTTTATA CAAATATTGC AGCGAAAAAG 10229 ||| ||| .......... .......... .......... .......... .......... ..GGAATAAG 435 hqPGS_C08HBa0235H18.1-_SGN-E298580- (11664 11330) ******************************************************************************** EST sequence 1065 +strand 451 n (File: SGN-E349554+) 1 AACAATATTG TTGCACCCAA GGTCCATGTG GCCCTACAGA GTTGTCCAAA TTTTTCAAGA 61 AAAGATGTCC CGATGCTTAT AGCTACCCAC AAGACGATCC TACAAGCACA TTTACTTGCC 121 CTGGTGGTAG TACAAACTAT AGGGTTGTCT TTTGTCCTAA TGGTGTTGCT GATCCAAATT 181 TCCCCTTGGA GATGCCTGCA AGTACTGATG AAGTGGCCAA GTGAATTTGA GTTTCTTCAT 241 TTTAAATCGC CTCAATTAGT CAACTGATCT CTACCGTAAT GAAAAATCTT AATAGCTCAG 301 TTTTTTAAAT ATTCACTTTT ACTTTATTGA TAAGAGTTCG TAACAAACTT AAAGACCGGA 361 ATAAGAGTTA CATCTCATGT GTACTTTTGT CTTAGATGTA TAAAACAACA GTGCATTTGA 421 AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA A Predicted gene structure (within gDNA segment 12194 to 8239): Exon 1 11594 11330 ( 265 n); cDNA 1 268 ( 268 n); score: 0.840 Intron 1 11329 11170 ( 160 n); Pd: 0.000 (s: 0.74), Pa: 0.000 (s: 0.54) Exon 2 11169 11078 ( 92 n); cDNA 269 357 ( 89 n); score: 0.603 Intron 2 11077 10237 ( 841 n); Pd: 0.000 (s: 0.64), Pa: 0.958 (s: 0) Exon 3 10236 10229 ( 8 n); cDNA 358 365 ( 8 n); score: 0.750 PPA cDNA 420 451 MATCH C08HBa0235H18.1- SGN-E349554+ 0.779 365 0.809 C PGS_C08HBa0235H18.1-_SGN-E349554+ (11594 11330,11169 11078,10236 10229) Alignment (genomic DNA sequence = upper lines): AACAATATTG TTGCACACAA GGTCCATGTG GCCCTACTGA TTTGTCGAGA TTTTTCAAAC 11535 |||||||||| |||||| ||| |||||||||| ||||||| || ||||| | | |||||||| AACAATATTG TTGCACCCAA GGTCCATGTG GCCCTACAGA GTTGTCCAAA TTTTTCAAGA 60 AAAGATGTCC TGATGCGTAT AGCTACCCAC AAGATGATCC TACTAGCACA TTTACTTGCC 11475 |||||||||| ||||| ||| |||||||||| |||| ||||| ||| |||||| |||||||||| AAAGATGTCC CGATGCTTAT AGCTACCCAC AAGACGATCC TACAAGCACA TTTACTTGCC 120 CTAGTGGTAG TACAAATTAT AGGGTTGTTT TTTGTCCTAA TGGTGTTACT AGCCCAAATT 11415 || ||||||| |||||| ||| |||||||| | |||||||||| ||||||| || ||||||| CTGGTGGTAG TACAAACTAT AGGGTTGTCT TTTGTCCTAA TGGTGTTGCT GATCCAAATT 180 TCCCCTTGGA GATGCCCTCA AG---TGATG AAGAGGCTAA GTAAAATTGA GTCACTTTCT 11358 |||||||||| |||||| || || ||||| ||| ||| || || || |||| || ||| | TCCCCTTGGA GATGCCTGCA AGTACTGATG AAGTGGCCAA GTGAATTTGA GTTTCTTCAT 240 TTTAAATTGC TTGAAGTAGT CGAGTTATAT AATTGGCTTG TAATAAACCT AATATAATTA 11298 ||||||| || | || |||| | | | || TTTAAATCGC CTCAATTAGT CAACTGAT.. .......... .......... .......... 268 CATGAATAAA AGTCACATCA TCACAAATAT GTTGTTTCGA ATATTATTTT ATGTATATTT 11238 .......... .......... .......... .......... .......... .......... 268 TGTTATTTAC GTATTAACTT GTCAAATAAA AGAATAATAT CAGTCAGTTT AAAAACATAA 11178 .......... .......... .......... .......... .......... .......... 268 AAACTATAAT ATACTGGATA AGATAAATAA GAACATCTCA CGAGATTATT TTATCTCATT 11118 | ||| | | | || |||| || | |||| ||| | || | || ........CT CTACCGTA-A TGAAAAATCT TAATAGCTCA GTTTTTTAAA TATTCACTTT 319 T-TTTTATAT GATAAAAGTT CCATCACAAA ATATAAAAAT AAAATAAATT AATCTCAAAA 11059 | ||||| | ||||| |||| | | ||||| | |||| | TACTTTAT-T GATAAGAGTT -CGTAACAAA CT-TAAAGAC C......... .......... 357 GTAACTAGTA CCTTAAAATA ATATAAAATA AAATAATCCC ATTTTATTAG AAATTATTAT 10999 .......... .......... .......... .......... .......... .......... 357 CCACAATTTT AGGGCAAAGT CAAAAGTAGA TGGAAATATT TGTTTATAGG CGGCTCTTAG 10939 .......... .......... .......... .......... .......... .......... 357 AACATTTTCA AGCTAAATGA TGTTAGCTGC ACGTGCTACT TGACACAATG CCAAAAGATT 10879 .......... .......... .......... .......... .......... .......... 357 AAATTGAGCA AAATTTATAT TTTTATTAAA AAAAATTATA TTTATAAACG TAGAAAATTC 10819 .......... .......... .......... .......... .......... .......... 357 ACTATTTTTT TTTTATCATT AACATGTTTT ACATATTTTA GAGGATTAAG AGTGAAAAAG 10759 .......... .......... .......... .......... .......... .......... 357 ATTCTAATAA CTTGTTAACT TGATATAATA GATTAACAAG TTGATTATAT CGCACTCTAA 10699 .......... .......... .......... .......... .......... .......... 357 AGAATAAAAT GAATTGTCAA AAATAATATT AATAATTTAT CGCCACTCAA AAAAATAAAA 10639 .......... .......... .......... .......... .......... .......... 357 AATATTGTAG AACGTGACTT TATCAATACT AATCTCTTTT AAAACAACGA TTGATTTGAA 10579 .......... .......... .......... .......... .......... .......... 357 CTTCACCGAA ATTGATGGAA TGAAATGACT AAATATTGTA TTGGGATAAA ATAATGGGAT 10519 .......... .......... .......... .......... .......... .......... 357 AATTGTATAT AATAGCAAAC TAATAACCTA AAATAAATGG AGTAGCTATG ATTTGATTTA 10459 .......... .......... .......... .......... .......... .......... 357 ATTGTGCACC ATAGCAAACG TTAGCCAAAG TTTGTCAGTC GCCTCTCTCT CTTTATACAC 10399 .......... .......... .......... .......... .......... .......... 357 AAAAGTGTAT AAATTGTGTT TCTGTTTTGT ATAAGCGAGA GAAAACTGTA TATACACATG 10339 .......... .......... .......... .......... .......... .......... 357 CAAAAACATA TATCTTCGTG TTATACACTT AATTATACAA TTTACAAATA TTTTACTTCA 10279 .......... .......... .......... .......... .......... .......... 357 ATTCAATTGT AGACAAATGC AAATTTTATA CAAATATTGC AGCGAAAAAG 10229 ||| ||| .......... .......... .......... .......... ..GGAATAAG 365 hqPGS_C08HBa0235H18.1-_SGN-E349554+ (11594 11330) ******************************************************************************** EST sequence 536 +strand 399 n (File: SGN-E351888+) 1 TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC AAGACGATCC TACAAGCACA 61 TTTACTTGCC CTGGTGGTAG TACAAACTAT AGGGTTGTCT TTTGTCCTAA TGGTGTTGCT 121 GATCCAAATT TCCCCTTGGA GATGCCTGCA AGTACTGATG AAGTGGCCAA GTGAATTTGA 181 GTTTCTTCAT TTTAAATCGC CTCAATTAGT CAACTGATCT CTACCGTAAT GAAAAATCTT 241 AATAGCTCAG TTTTTTAAAT ATTCACTTTT ACTTTATTGA TAAGAGTTCG TAACAAACTT 301 AAAGACCGGA ATAAGAGTTA CATCTCATGT GTACTTTTGT CTTAGATGTA TAAAACAACA 361 GTGCATTTGA AAAANANAAA AAAAAAAAAA AAAAAAAAA Predicted gene structure (within gDNA segment 12387 to 8259): Exon 1 11544 11330 ( 215 n); cDNA 1 218 ( 218 n); score: 0.826 Intron 1 11329 11170 ( 160 n); Pd: 0.000 (s: 0.74), Pa: 0.000 (s: 0.54) Exon 2 11169 11078 ( 92 n); cDNA 219 307 ( 89 n); score: 0.603 Intron 2 11077 10237 ( 841 n); Pd: 0.000 (s: 0.64), Pa: 0.958 (s: 0) Exon 3 10236 10229 ( 8 n); cDNA 308 315 ( 8 n); score: 0.750 PPA cDNA 378 399 MATCH C08HBa0235H18.1- SGN-E351888+ 0.759 315 0.789 C PGS_C08HBa0235H18.1-_SGN-E351888+ (11544 11330,11169 11078,10236 10229) Alignment (genomic DNA sequence = upper lines): TTTTTCAAAC AAAGATGTCC TGATGCGTAT AGCTACCCAC AAGATGATCC TACTAGCACA 11485 |||||||| |||||||||| ||||| ||| |||||||||| |||| ||||| ||| |||||| TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC AAGACGATCC TACAAGCACA 60 TTTACTTGCC CTAGTGGTAG TACAAATTAT AGGGTTGTTT TTTGTCCTAA TGGTGTTACT 11425 |||||||||| || ||||||| |||||| ||| |||||||| | |||||||||| ||||||| || TTTACTTGCC CTGGTGGTAG TACAAACTAT AGGGTTGTCT TTTGTCCTAA TGGTGTTGCT 120 AGCCCAAATT TCCCCTTGGA GATGCCCTCA AG---TGATG AAGAGGCTAA GTAAAATTGA 11368 ||||||| |||||||||| |||||| || || ||||| ||| ||| || || || |||| GATCCAAATT TCCCCTTGGA GATGCCTGCA AGTACTGATG AAGTGGCCAA GTGAATTTGA 180 GTCACTTTCT TTTAAATTGC TTGAAGTAGT CGAGTTATAT AATTGGCTTG TAATAAACCT 11308 || ||| | ||||||| || | || |||| | | | || GTTTCTTCAT TTTAAATCGC CTCAATTAGT CAACTGAT.. .......... .......... 218 AATATAATTA CATGAATAAA AGTCACATCA TCACAAATAT GTTGTTTCGA ATATTATTTT 11248 .......... .......... .......... .......... .......... .......... 218 ATGTATATTT TGTTATTTAC GTATTAACTT GTCAAATAAA AGAATAATAT CAGTCAGTTT 11188 .......... .......... .......... .......... .......... .......... 218 AAAAACATAA AAACTATAAT ATACTGGATA AGATAAATAA GAACATCTCA CGAGATTATT 11128 | ||| | | | || |||| || | |||| ||| .......... ........CT CTACCGTA-A TGAAAAATCT TAATAGCTCA GTTTTTTAAA 259 TTATCTCATT T-TTTTATAT GATAAAAGTT CCATCACAAA ATATAAAAAT AAAATAAATT 11069 | || | || | ||||| | ||||| |||| | | ||||| | |||| | TATTCACTTT TACTTTAT-T GATAAGAGTT -CGTAACAAA CT-TAAAGAC C......... 307 AATCTCAAAA GTAACTAGTA CCTTAAAATA ATATAAAATA AAATAATCCC ATTTTATTAG 11009 .......... .......... .......... .......... .......... .......... 307 AAATTATTAT CCACAATTTT AGGGCAAAGT CAAAAGTAGA TGGAAATATT TGTTTATAGG 10949 .......... .......... .......... .......... .......... .......... 307 CGGCTCTTAG AACATTTTCA AGCTAAATGA TGTTAGCTGC ACGTGCTACT TGACACAATG 10889 .......... .......... .......... .......... .......... .......... 307 CCAAAAGATT AAATTGAGCA AAATTTATAT TTTTATTAAA AAAAATTATA TTTATAAACG 10829 .......... .......... .......... .......... .......... .......... 307 TAGAAAATTC ACTATTTTTT TTTTATCATT AACATGTTTT ACATATTTTA GAGGATTAAG 10769 .......... .......... .......... .......... .......... .......... 307 AGTGAAAAAG ATTCTAATAA CTTGTTAACT TGATATAATA GATTAACAAG TTGATTATAT 10709 .......... .......... .......... .......... .......... .......... 307 CGCACTCTAA AGAATAAAAT GAATTGTCAA AAATAATATT AATAATTTAT CGCCACTCAA 10649 .......... .......... .......... .......... .......... .......... 307 AAAAATAAAA AATATTGTAG AACGTGACTT TATCAATACT AATCTCTTTT AAAACAACGA 10589 .......... .......... .......... .......... .......... .......... 307 TTGATTTGAA CTTCACCGAA ATTGATGGAA TGAAATGACT AAATATTGTA TTGGGATAAA 10529 .......... .......... .......... .......... .......... .......... 307 ATAATGGGAT AATTGTATAT AATAGCAAAC TAATAACCTA AAATAAATGG AGTAGCTATG 10469 .......... .......... .......... .......... .......... .......... 307 ATTTGATTTA ATTGTGCACC ATAGCAAACG TTAGCCAAAG TTTGTCAGTC GCCTCTCTCT 10409 .......... .......... .......... .......... .......... .......... 307 CTTTATACAC AAAAGTGTAT AAATTGTGTT TCTGTTTTGT ATAAGCGAGA GAAAACTGTA 10349 .......... .......... .......... .......... .......... .......... 307 TATACACATG CAAAAACATA TATCTTCGTG TTATACACTT AATTATACAA TTTACAAATA 10289 .......... .......... .......... .......... .......... .......... 307 TTTTACTTCA ATTCAATTGT AGACAAATGC AAATTTTATA CAAATATTGC AGCGAAAAAG 10229 ||| ||| .......... .......... .......... .......... .......... ..GGAATAAG 315 hqPGS_C08HBa0235H18.1-_SGN-E351888+ (11544 11330) ******************************************************************************** EST sequence 859 +strand 399 n (File: SGN-E351415+) 1 TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC AAGACGATCC TACAAGCACA 61 TTTACTTGCC CTGGTGGTAG TACAAACTAT AGGGTTGTCT TTTGTCCTAA TGGTGTTGCT 121 GATCCAAATT TCCCCTTGGA GATGCCTGCA AGTACTGATG AAGTGGCCAA GTGAATTTGA 181 GTTTCTTCAT TTTAAATCGC CTCAATTAGT CAACTGATCT CTACCGTAAT GAAAAATCTT 241 AATAGCTCAG TTTTTTAAAT ATTCACTTTT ACTTTATTGA TAAGAGTTCG TAACAAACTT 301 AAAGACCGGA ATAAGAGTTA CATCTCATGT GTACTTTTGT CTTAGATGTA TAAAACAACA 361 GTGCATTTGA AAAAAAAAAA AAAAAAAAAA AAAAAAAAA Predicted gene structure (within gDNA segment 12387 to 8259): Exon 1 11544 11330 ( 215 n); cDNA 1 218 ( 218 n); score: 0.826 Intron 1 11329 11170 ( 160 n); Pd: 0.000 (s: 0.74), Pa: 0.000 (s: 0.54) Exon 2 11169 11078 ( 92 n); cDNA 219 307 ( 89 n); score: 0.603 Intron 2 11077 10237 ( 841 n); Pd: 0.000 (s: 0.64), Pa: 0.958 (s: 0) Exon 3 10236 10229 ( 8 n); cDNA 308 315 ( 8 n); score: 0.750 PPA cDNA 370 399 MATCH C08HBa0235H18.1- SGN-E351415+ 0.759 315 0.789 C PGS_C08HBa0235H18.1-_SGN-E351415+ (11544 11330,11169 11078,10236 10229) Alignment (genomic DNA sequence = upper lines): TTTTTCAAAC AAAGATGTCC TGATGCGTAT AGCTACCCAC AAGATGATCC TACTAGCACA 11485 |||||||| |||||||||| ||||| ||| |||||||||| |||| ||||| ||| |||||| TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC AAGACGATCC TACAAGCACA 60 TTTACTTGCC CTAGTGGTAG TACAAATTAT AGGGTTGTTT TTTGTCCTAA TGGTGTTACT 11425 |||||||||| || ||||||| |||||| ||| |||||||| | |||||||||| ||||||| || TTTACTTGCC CTGGTGGTAG TACAAACTAT AGGGTTGTCT TTTGTCCTAA TGGTGTTGCT 120 AGCCCAAATT TCCCCTTGGA GATGCCCTCA AG---TGATG AAGAGGCTAA GTAAAATTGA 11368 ||||||| |||||||||| |||||| || || ||||| ||| ||| || || || |||| GATCCAAATT TCCCCTTGGA GATGCCTGCA AGTACTGATG AAGTGGCCAA GTGAATTTGA 180 GTCACTTTCT TTTAAATTGC TTGAAGTAGT CGAGTTATAT AATTGGCTTG TAATAAACCT 11308 || ||| | ||||||| || | || |||| | | | || GTTTCTTCAT TTTAAATCGC CTCAATTAGT CAACTGAT.. .......... .......... 218 AATATAATTA CATGAATAAA AGTCACATCA TCACAAATAT GTTGTTTCGA ATATTATTTT 11248 .......... .......... .......... .......... .......... .......... 218 ATGTATATTT TGTTATTTAC GTATTAACTT GTCAAATAAA AGAATAATAT CAGTCAGTTT 11188 .......... .......... .......... .......... .......... .......... 218 AAAAACATAA AAACTATAAT ATACTGGATA AGATAAATAA GAACATCTCA CGAGATTATT 11128 | ||| | | | || |||| || | |||| ||| .......... ........CT CTACCGTA-A TGAAAAATCT TAATAGCTCA GTTTTTTAAA 259 TTATCTCATT T-TTTTATAT GATAAAAGTT CCATCACAAA ATATAAAAAT AAAATAAATT 11069 | || | || | ||||| | ||||| |||| | | ||||| | |||| | TATTCACTTT TACTTTAT-T GATAAGAGTT -CGTAACAAA CT-TAAAGAC C......... 307 AATCTCAAAA GTAACTAGTA CCTTAAAATA ATATAAAATA AAATAATCCC ATTTTATTAG 11009 .......... .......... .......... .......... .......... .......... 307 AAATTATTAT CCACAATTTT AGGGCAAAGT CAAAAGTAGA TGGAAATATT TGTTTATAGG 10949 .......... .......... .......... .......... .......... .......... 307 CGGCTCTTAG AACATTTTCA AGCTAAATGA TGTTAGCTGC ACGTGCTACT TGACACAATG 10889 .......... .......... .......... .......... .......... .......... 307 CCAAAAGATT AAATTGAGCA AAATTTATAT TTTTATTAAA AAAAATTATA TTTATAAACG 10829 .......... .......... .......... .......... .......... .......... 307 TAGAAAATTC ACTATTTTTT TTTTATCATT AACATGTTTT ACATATTTTA GAGGATTAAG 10769 .......... .......... .......... .......... .......... .......... 307 AGTGAAAAAG ATTCTAATAA CTTGTTAACT TGATATAATA GATTAACAAG TTGATTATAT 10709 .......... .......... .......... .......... .......... .......... 307 CGCACTCTAA AGAATAAAAT GAATTGTCAA AAATAATATT AATAATTTAT CGCCACTCAA 10649 .......... .......... .......... .......... .......... .......... 307 AAAAATAAAA AATATTGTAG AACGTGACTT TATCAATACT AATCTCTTTT AAAACAACGA 10589 .......... .......... .......... .......... .......... .......... 307 TTGATTTGAA CTTCACCGAA ATTGATGGAA TGAAATGACT AAATATTGTA TTGGGATAAA 10529 .......... .......... .......... .......... .......... .......... 307 ATAATGGGAT AATTGTATAT AATAGCAAAC TAATAACCTA AAATAAATGG AGTAGCTATG 10469 .......... .......... .......... .......... .......... .......... 307 ATTTGATTTA ATTGTGCACC ATAGCAAACG TTAGCCAAAG TTTGTCAGTC GCCTCTCTCT 10409 .......... .......... .......... .......... .......... .......... 307 CTTTATACAC AAAAGTGTAT AAATTGTGTT TCTGTTTTGT ATAAGCGAGA GAAAACTGTA 10349 .......... .......... .......... .......... .......... .......... 307 TATACACATG CAAAAACATA TATCTTCGTG TTATACACTT AATTATACAA TTTACAAATA 10289 .......... .......... .......... .......... .......... .......... 307 TTTTACTTCA ATTCAATTGT AGACAAATGC AAATTTTATA CAAATATTGC AGCGAAAAAG 10229 ||| ||| .......... .......... .......... .......... .......... ..GGAATAAG 315 hqPGS_C08HBa0235H18.1-_SGN-E351415+ (11544 11330) ******************************************************************************** EST sequence 900 +strand 399 n (File: SGN-E352177+) 1 TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC AAGACGATCC TACAAGCACA 61 TTTACTTGCC CTGGTGGTAG TACAAACTAT AGGGTTGTCT TTTGTCCTAA TGGTGTTGCT 121 GATCCAAATT TCCCCTTGGA GATGCCTGCA AGTACTGATG AAGTGGCCAA GTGAATTTGA 181 GTTTCTTCAT TTTAAATCGC CTCAATTAGT CAACTGATCT CTACCGTAAT GAAAAATCTT 241 AATAGCTCAG TTTTTTAAAT ATTCACTTTT ACTTTATTGA TAAGAATTCG TAACAAACTT 301 AAAGAACGGA ATAAGAATTA CATCTCATGG GGACTTTTGG CCTAAAAGGA TAAAACAACA 361 GTGCATTTGG AAAAAAAANN AAAAAAAAAA AAAANAAAA Predicted gene structure (within gDNA segment 12387 to 8259): Exon 1 11544 11330 ( 215 n); cDNA 1 218 ( 218 n); score: 0.826 Intron 1 11329 11170 ( 160 n); Pd: 0.000 (s: 0.74), Pa: 0.000 (s: 0.54) Exon 2 11169 11079 ( 91 n); cDNA 219 307 ( 89 n); score: 0.588 Intron 2 11078 10237 ( 842 n); Pd: 0.000 (s: 0.62), Pa: 0.958 (s: 0) Exon 3 10236 10229 ( 8 n); cDNA 308 315 ( 8 n); score: 0.750 PPA cDNA 381 399 MATCH C08HBa0235H18.1- SGN-E352177+ 0.755 314 0.787 C PGS_C08HBa0235H18.1-_SGN-E352177+ (11544 11330,11169 11079,10236 10229) Alignment (genomic DNA sequence = upper lines): TTTTTCAAAC AAAGATGTCC TGATGCGTAT AGCTACCCAC AAGATGATCC TACTAGCACA 11485 |||||||| |||||||||| ||||| ||| |||||||||| |||| ||||| ||| |||||| TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC AAGACGATCC TACAAGCACA 60 TTTACTTGCC CTAGTGGTAG TACAAATTAT AGGGTTGTTT TTTGTCCTAA TGGTGTTACT 11425 |||||||||| || ||||||| |||||| ||| |||||||| | |||||||||| ||||||| || TTTACTTGCC CTGGTGGTAG TACAAACTAT AGGGTTGTCT TTTGTCCTAA TGGTGTTGCT 120 AGCCCAAATT TCCCCTTGGA GATGCCCTCA AG---TGATG AAGAGGCTAA GTAAAATTGA 11368 ||||||| |||||||||| |||||| || || ||||| ||| ||| || || || |||| GATCCAAATT TCCCCTTGGA GATGCCTGCA AGTACTGATG AAGTGGCCAA GTGAATTTGA 180 GTCACTTTCT TTTAAATTGC TTGAAGTAGT CGAGTTATAT AATTGGCTTG TAATAAACCT 11308 || ||| | ||||||| || | || |||| | | | || GTTTCTTCAT TTTAAATCGC CTCAATTAGT CAACTGAT.. .......... .......... 218 AATATAATTA CATGAATAAA AGTCACATCA TCACAAATAT GTTGTTTCGA ATATTATTTT 11248 .......... .......... .......... .......... .......... .......... 218 ATGTATATTT TGTTATTTAC GTATTAACTT GTCAAATAAA AGAATAATAT CAGTCAGTTT 11188 .......... .......... .......... .......... .......... .......... 218 AAAAACATAA AAACTATAAT ATACTGGATA AGATAAATAA GAACATCTCA CGAGATTATT 11128 | ||| | | | || |||| || | |||| ||| .......... ........CT CTACCGTA-A TGAAAAATCT TAATAGCTCA GTTTTTTAAA 259 TTATCTCATT T-TTTTATAT GATAAAAGTT CCATCACAAA ATATAAAAAT AAAATAAATT 11069 | || | || | ||||| | ||||| | || | | ||||| | || || TATTCACTTT TACTTTAT-T GATAAGAATT -CGTAACAAA CTTAAAGAAC .......... 307 AATCTCAAAA GTAACTAGTA CCTTAAAATA ATATAAAATA AAATAATCCC ATTTTATTAG 11009 .......... .......... .......... .......... .......... .......... 307 AAATTATTAT CCACAATTTT AGGGCAAAGT CAAAAGTAGA TGGAAATATT TGTTTATAGG 10949 .......... .......... .......... .......... .......... .......... 307 CGGCTCTTAG AACATTTTCA AGCTAAATGA TGTTAGCTGC ACGTGCTACT TGACACAATG 10889 .......... .......... .......... .......... .......... .......... 307 CCAAAAGATT AAATTGAGCA AAATTTATAT TTTTATTAAA AAAAATTATA TTTATAAACG 10829 .......... .......... .......... .......... .......... .......... 307 TAGAAAATTC ACTATTTTTT TTTTATCATT AACATGTTTT ACATATTTTA GAGGATTAAG 10769 .......... .......... .......... .......... .......... .......... 307 AGTGAAAAAG ATTCTAATAA CTTGTTAACT TGATATAATA GATTAACAAG TTGATTATAT 10709 .......... .......... .......... .......... .......... .......... 307 CGCACTCTAA AGAATAAAAT GAATTGTCAA AAATAATATT AATAATTTAT CGCCACTCAA 10649 .......... .......... .......... .......... .......... .......... 307 AAAAATAAAA AATATTGTAG AACGTGACTT TATCAATACT AATCTCTTTT AAAACAACGA 10589 .......... .......... .......... .......... .......... .......... 307 TTGATTTGAA CTTCACCGAA ATTGATGGAA TGAAATGACT AAATATTGTA TTGGGATAAA 10529 .......... .......... .......... .......... .......... .......... 307 ATAATGGGAT AATTGTATAT AATAGCAAAC TAATAACCTA AAATAAATGG AGTAGCTATG 10469 .......... .......... .......... .......... .......... .......... 307 ATTTGATTTA ATTGTGCACC ATAGCAAACG TTAGCCAAAG TTTGTCAGTC GCCTCTCTCT 10409 .......... .......... .......... .......... .......... .......... 307 CTTTATACAC AAAAGTGTAT AAATTGTGTT TCTGTTTTGT ATAAGCGAGA GAAAACTGTA 10349 .......... .......... .......... .......... .......... .......... 307 TATACACATG CAAAAACATA TATCTTCGTG TTATACACTT AATTATACAA TTTACAAATA 10289 .......... .......... .......... .......... .......... .......... 307 TTTTACTTCA ATTCAATTGT AGACAAATGC AAATTTTATA CAAATATTGC AGCGAAAAAG 10229 ||| ||| .......... .......... .......... .......... .......... ..GGAATAAG 315 hqPGS_C08HBa0235H18.1-_SGN-E352177+ (11544 11330) ******************************************************************************** EST sequence 902 +strand 399 n (File: SGN-E351985+) 1 TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC AAGACGATCC TACAAGCACA 61 TTTACTTGCC CTGGTGGTAG TACAAACTAT AGGGTTGTCT TTTGTCCTAA TGGTGTTGCT 121 GATCCAAATT TCCCCTTGGA GATGCCTGCA AGTACTGATG AAGTGGCCAA GTGAATTTGA 181 GTTTCTTCAT TTTAAATCGC CTCAATTAGT CAACTGATCT CTACCGTAAT GAAAAATCTT 241 AATAGCTCAG TTTTTTAAAT ATTCACTTTT ACTTTATTGA TAAGAGTTCG TAACAAACTT 301 AAAGACCGGA ATAAGAGTTA CATCTCATGT GTACTTTTGT CTTAGATGTA TAAAACAACA 361 GTGCATTTGN NNNNNAAAAA AAAAAAAAAA AAAAAAAAA Predicted gene structure (within gDNA segment 12387 to 8259): Exon 1 11544 11330 ( 215 n); cDNA 1 218 ( 218 n); score: 0.826 Intron 1 11329 11170 ( 160 n); Pd: 0.000 (s: 0.74), Pa: 0.000 (s: 0.54) Exon 2 11169 11078 ( 92 n); cDNA 219 307 ( 89 n); score: 0.603 Intron 2 11077 10237 ( 841 n); Pd: 0.000 (s: 0.64), Pa: 0.958 (s: 0) Exon 3 10236 10229 ( 8 n); cDNA 308 315 ( 8 n); score: 0.750 PPA cDNA 376 399 MATCH C08HBa0235H18.1- SGN-E351985+ 0.759 315 0.789 C PGS_C08HBa0235H18.1-_SGN-E351985+ (11544 11330,11169 11078,10236 10229) Alignment (genomic DNA sequence = upper lines): TTTTTCAAAC AAAGATGTCC TGATGCGTAT AGCTACCCAC AAGATGATCC TACTAGCACA 11485 |||||||| |||||||||| ||||| ||| |||||||||| |||| ||||| ||| |||||| TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC AAGACGATCC TACAAGCACA 60 TTTACTTGCC CTAGTGGTAG TACAAATTAT AGGGTTGTTT TTTGTCCTAA TGGTGTTACT 11425 |||||||||| || ||||||| |||||| ||| |||||||| | |||||||||| ||||||| || TTTACTTGCC CTGGTGGTAG TACAAACTAT AGGGTTGTCT TTTGTCCTAA TGGTGTTGCT 120 AGCCCAAATT TCCCCTTGGA GATGCCCTCA AG---TGATG AAGAGGCTAA GTAAAATTGA 11368 ||||||| |||||||||| |||||| || || ||||| ||| ||| || || || |||| GATCCAAATT TCCCCTTGGA GATGCCTGCA AGTACTGATG AAGTGGCCAA GTGAATTTGA 180 GTCACTTTCT TTTAAATTGC TTGAAGTAGT CGAGTTATAT AATTGGCTTG TAATAAACCT 11308 || ||| | ||||||| || | || |||| | | | || GTTTCTTCAT TTTAAATCGC CTCAATTAGT CAACTGAT.. .......... .......... 218 AATATAATTA CATGAATAAA AGTCACATCA TCACAAATAT GTTGTTTCGA ATATTATTTT 11248 .......... .......... .......... .......... .......... .......... 218 ATGTATATTT TGTTATTTAC GTATTAACTT GTCAAATAAA AGAATAATAT CAGTCAGTTT 11188 .......... .......... .......... .......... .......... .......... 218 AAAAACATAA AAACTATAAT ATACTGGATA AGATAAATAA GAACATCTCA CGAGATTATT 11128 | ||| | | | || |||| || | |||| ||| .......... ........CT CTACCGTA-A TGAAAAATCT TAATAGCTCA GTTTTTTAAA 259 TTATCTCATT T-TTTTATAT GATAAAAGTT CCATCACAAA ATATAAAAAT AAAATAAATT 11069 | || | || | ||||| | ||||| |||| | | ||||| | |||| | TATTCACTTT TACTTTAT-T GATAAGAGTT -CGTAACAAA CT-TAAAGAC C......... 307 AATCTCAAAA GTAACTAGTA CCTTAAAATA ATATAAAATA AAATAATCCC ATTTTATTAG 11009 .......... .......... .......... .......... .......... .......... 307 AAATTATTAT CCACAATTTT AGGGCAAAGT CAAAAGTAGA TGGAAATATT TGTTTATAGG 10949 .......... .......... .......... .......... .......... .......... 307 CGGCTCTTAG AACATTTTCA AGCTAAATGA TGTTAGCTGC ACGTGCTACT TGACACAATG 10889 .......... .......... .......... .......... .......... .......... 307 CCAAAAGATT AAATTGAGCA AAATTTATAT TTTTATTAAA AAAAATTATA TTTATAAACG 10829 .......... .......... .......... .......... .......... .......... 307 TAGAAAATTC ACTATTTTTT TTTTATCATT AACATGTTTT ACATATTTTA GAGGATTAAG 10769 .......... .......... .......... .......... .......... .......... 307 AGTGAAAAAG ATTCTAATAA CTTGTTAACT TGATATAATA GATTAACAAG TTGATTATAT 10709 .......... .......... .......... .......... .......... .......... 307 CGCACTCTAA AGAATAAAAT GAATTGTCAA AAATAATATT AATAATTTAT CGCCACTCAA 10649 .......... .......... .......... .......... .......... .......... 307 AAAAATAAAA AATATTGTAG AACGTGACTT TATCAATACT AATCTCTTTT AAAACAACGA 10589 .......... .......... .......... .......... .......... .......... 307 TTGATTTGAA CTTCACCGAA ATTGATGGAA TGAAATGACT AAATATTGTA TTGGGATAAA 10529 .......... .......... .......... .......... .......... .......... 307 ATAATGGGAT AATTGTATAT AATAGCAAAC TAATAACCTA AAATAAATGG AGTAGCTATG 10469 .......... .......... .......... .......... .......... .......... 307 ATTTGATTTA ATTGTGCACC ATAGCAAACG TTAGCCAAAG TTTGTCAGTC GCCTCTCTCT 10409 .......... .......... .......... .......... .......... .......... 307 CTTTATACAC AAAAGTGTAT AAATTGTGTT TCTGTTTTGT ATAAGCGAGA GAAAACTGTA 10349 .......... .......... .......... .......... .......... .......... 307 TATACACATG CAAAAACATA TATCTTCGTG TTATACACTT AATTATACAA TTTACAAATA 10289 .......... .......... .......... .......... .......... .......... 307 TTTTACTTCA ATTCAATTGT AGACAAATGC AAATTTTATA CAAATATTGC AGCGAAAAAG 10229 ||| ||| .......... .......... .......... .......... .......... ..GGAATAAG 315 hqPGS_C08HBa0235H18.1-_SGN-E351985+ (11544 11330) ******************************************************************************** EST sequence 516 +strand 713 n (File: SGN-E210944+) 1 TCAATCGAGG CCAAACATGG GTCATCAATG CTCCGAGGGG AACTAAGATG GCACGTATAT 61 GGGGTCGTAC TGGTTGCAAC TTTAATGCTG CAGGCAGAGG TACATGTCAG ACTGGTGATT 121 GTGGTGGAGT CTTACAGTGT ACCGGATGGG GCAAACCCCC AAACACCCTA GCCGAGTACG 181 CCTTGGACCA GTTTAGCAAC TTAGATTTTT GGGACATTTC TTTAGTCGAT GGATTTAATA 241 TTCCAATGAC TTTTGCCCCA ACAAAACCTA GTGGAGGAAA ATGTCACGCA ATTCATTGCA 301 CGGCCAATAT AAATGGTGAA TGTCCTCGCG CCCTTAAGGT ACCTGGAGGA TGTAACAACC 361 CTTGTACCAC GTTTGGAGGA CAACAATATT GTTGCACCCA AGGTCCATGT GGCCCTACAG 421 AGTTGTCCAA ATTTTTCAAG AAAAGATGTC CCGATGCTTA TAGCTACCCA CAAGACGATC 481 CTACAAGCAC ATTTACTTGC CCTGGTGGTA GTACAAACTA TAGGGTTGTC TTTTGTCCTA 541 ATGGTGTTGC TGATCCAAAT TTCCCCTTGG AGATGCCTGC AAGTACTGAT GAAGTGGCCA 601 AGTGAATTTG AGTTTCTTCA TTTTAAATCG CCTCAATTAG TCAACTGATC TCTACCGTAA 661 TGAAAAATCT TAATAGCTCA GTTTTTTAAA TATTCACTTT TACTTTATTG ATA Predicted gene structure (within gDNA segment 12602 to 9429): Exon 1 11972 11337 ( 636 n); cDNA 4 642 ( 639 n); score: 0.883 MATCH C08HBa0235H18.1- SGN-E210944+ 0.883 636 0.892 C PGS_C08HBa0235H18.1-_SGN-E210944+ (11972 11337) Alignment (genomic DNA sequence = upper lines): ATCGAGGCCA AACATGGGTC ATCAATGCAC CGAGGGGCAC TAAGATGGCA CGTATATGGG 11913 |||||||||| |||||||||| |||||||| | ||||||| || |||||||||| |||||||||| ATCGAGGCCA AACATGGGTC ATCAATGCTC CGAGGGGAAC TAAGATGGCA CGTATATGGG 63 GTCGTACGAA TTGCAACTTT GATGGTGCTG GTAGAGGTTC ATGTCAGACT GGTGATTGTG 11853 ||||||| |||||||||| ||| ||| | | |||||| | |||||||||| |||||||||| GTCGTACTGG TTGCAACTTT AATGCTGCAG GCAGAGGTAC ATGTCAGACT GGTGATTGTG 123 GTGGGGTCTT GCAATGTACC GGGTGGGGCA AACCACCAAA CACCCTGGCC GAGTACGCCT 11793 |||| ||||| || |||||| || ||||||| |||| ||||| |||||| ||| |||||||||| GTGGAGTCTT ACAGTGTACC GGATGGGGCA AACCCCCAAA CACCCTAGCC GAGTACGCCT 183 TGGACCAGTT TAGCAACCTA GATTTCTGGG ACATTTCTTT AGTCGATGGA TTTAATATTC 11733 |||||||||| ||||||| || ||||| |||| |||||||||| |||||||||| |||||||||| TGGACCAGTT TAGCAACTTA GATTTTTGGG ACATTTCTTT AGTCGATGGA TTTAATATTC 243 CAATGACTTT CGCCCCGACC AATCCTAGTG GAGGGAAATG CCATGCAATT CATTGTACGG 11673 |||||||||| ||||| || || ||||||| |||| ||||| || |||||| ||||| |||| CAATGACTTT TGCCCCAACA AAACCTAGTG GAGGAAAATG TCACGCAATT CATTGCACGG 303 CTAATATAAA TGGTGAATGT CCTGGTTCAC TTAGGGTACC CGGAGGATGT AACAATCCTT 11613 | |||||||| |||||||||| ||| | | | ||| |||||| ||||||||| ||||| |||| CCAATATAAA TGGTGAATGT CCTCGCGCCC TTAAGGTACC TGGAGGATGT AACAACCCTT 363 GTACCACGTT CGGAGGACAA CAATATTGTT GCACACAAGG TCCATGTGGC CCTACTGATT 11553 |||||||||| ||||||||| |||||||||| |||| ||||| |||||||||| ||||| || | GTACCACGTT TGGAGGACAA CAATATTGTT GCACCCAAGG TCCATGTGGC CCTACAGAGT 423 TGTCGAGATT TTTCAAACAA AGATGTCCTG ATGCGTATAG CTACCCACAA GATGATCCTA 11493 |||| | ||| |||||| || |||||||| | |||| ||||| |||||||||| || ||||||| TGTCCAAATT TTTCAAGAAA AGATGTCCCG ATGCTTATAG CTACCCACAA GACGATCCTA 483 CTAGCACATT TACTTGCCCT AGTGGTAGTA CAAATTATAG GGTTGTTTTT TGTCCTAATG 11433 | |||||||| |||||||||| ||||||||| |||| ||||| |||||| ||| |||||||||| CAAGCACATT TACTTGCCCT GGTGGTAGTA CAAACTATAG GGTTGTCTTT TGTCCTAATG 543 GTGTTACTAG CCCAAATTTC CCCTTGGAGA TGCCCTCAAG ---TGATGAA GAGGCTAAGT 11376 ||||| || ||||||||| |||||||||| |||| |||| ||||||| | ||| |||| GTGTTGCTGA TCCAAATTTC CCCTTGGAGA TGCCTGCAAG TACTGATGAA GTGGCCAAGT 603 AAAATTGAGT CACTTTCTTT TAAATTGCTT GAAGTAGTC 11337 || |||||| ||| ||| ||||| || | || ||||| GAATTTGAGT TTCTTCATTT TAAATCGCCT CAATTAGTC 642 hqPGS_C08HBa0235H18.1-_SGN-E210944+ (11972 11337) ******************************************************************************** EST sequence 808 +strand 697 n (File: SGN-E375347+) 1 CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG CACGTATATG GGGTCGTACT 61 GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA CTGGTGATTG TGGTGGAGTC 121 TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG CCGAGTACGC CTTGGACCAG 181 TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG GATTTAATAT TCCAATGACT 241 TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA TTCATTGCAC GGCCAATATA 301 AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT GTAACAACCC TTGTACCACG 361 TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG GCCCTACAGA GTTGTCCAAA 421 TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC AAGACGATCC TACAAGCACA 481 TTTACTTGCC CTGGTGGTAG TACAAACTAT AGGGTTGTCT TTTGTCCTAA TGGTGTTGCT 541 GATCCAAATT TCCCCTTGGA GATGCCTGCA AGTACTGATG AAGTGGCCAA GTGAATTTGA 601 GTTTCTTCAT TTTAAATCGC CTCAATTAGT CAACTGATCT CTACCGTAAT GAAAAATCTT 661 AATAGCTCAG TTTTTTAAAT ATTCACTTTT ACTTTAT Predicted gene structure (within gDNA segment 12564 to 9479): Exon 1 11964 11337 ( 628 n); cDNA 1 631 ( 631 n); score: 0.881 MATCH C08HBa0235H18.1- SGN-E375347+ 0.881 628 0.901 C PGS_C08HBa0235H18.1-_SGN-E375347+ (11964 11337) Alignment (genomic DNA sequence = upper lines): CAAACATGGG TCATCAATGC ACCGAGGGGC ACTAAGATGG CACGTATATG GGGTCGTACG 11905 |||||||||| |||||||||| |||||||| |||||||||| |||||||||| ||||||||| CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG CACGTATATG GGGTCGTACT 60 AATTGCAACT TTGATGGTGC TGGTAGAGGT TCATGTCAGA CTGGTGATTG TGGTGGGGTC 11845 |||||||| || ||| ||| || |||||| ||||||||| |||||||||| |||||| ||| GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA CTGGTGATTG TGGTGGAGTC 120 TTGCAATGTA CCGGGTGGGG CAAACCACCA AACACCCTGG CCGAGTACGC CTTGGACCAG 11785 || || |||| |||| ||||| |||||| ||| |||||||| | |||||||||| |||||||||| TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG CCGAGTACGC CTTGGACCAG 180 TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG GATTTAATAT TCCAATGACT 11725 ||||||||| ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG GATTTAATAT TCCAATGACT 240 TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA TTCATTGTAC GGCTAATATA 11665 || ||||| | | || ||||| |||||| ||| || || |||| ||||||| || ||| |||||| TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA TTCATTGCAC GGCCAATATA 300 AATGGTGAAT GTCCTGGTTC ACTTAGGGTA CCCGGAGGAT GTAACAATCC TTGTACCACG 11605 |||||||||| ||||| | | |||| |||| || ||||||| ||||||| || |||||||||| AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT GTAACAACCC TTGTACCACG 360 TTCGGAGGAC AACAATATTG TTGCACACAA GGTCCATGTG GCCCTACTGA TTTGTCGAGA 11545 || ||||||| |||||||||| |||||| ||| |||||||||| ||||||| || ||||| | | TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG GCCCTACAGA GTTGTCCAAA 420 TTTTTCAAAC AAAGATGTCC TGATGCGTAT AGCTACCCAC AAGATGATCC TACTAGCACA 11485 |||||||| |||||||||| ||||| ||| |||||||||| |||| ||||| ||| |||||| TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC AAGACGATCC TACAAGCACA 480 TTTACTTGCC CTAGTGGTAG TACAAATTAT AGGGTTGTTT TTTGTCCTAA TGGTGTTACT 11425 |||||||||| || ||||||| |||||| ||| |||||||| | |||||||||| ||||||| || TTTACTTGCC CTGGTGGTAG TACAAACTAT AGGGTTGTCT TTTGTCCTAA TGGTGTTGCT 540 AGCCCAAATT TCCCCTTGGA GATGCCCTCA AG---TGATG AAGAGGCTAA GTAAAATTGA 11368 ||||||| |||||||||| |||||| || || ||||| ||| ||| || || || |||| GATCCAAATT TCCCCTTGGA GATGCCTGCA AGTACTGATG AAGTGGCCAA GTGAATTTGA 600 GTCACTTTCT TTTAAATTGC TTGAAGTAGT C 11337 || ||| | ||||||| || | || |||| | GTTTCTTCAT TTTAAATCGC CTCAATTAGT C 631 hqPGS_C08HBa0235H18.1-_SGN-E375347+ (11964 11337) ******************************************************************************** EST sequence 893 +strand 672 n (File: SGN-E268624+) 1 AACTAAGATG GCACGTATAT GGGGTCGTAC TGGTTGCAAC TTTAATGCTG CAGGCAGAGG 61 TACATGTCAG ACTGGTGATT GTGGTGGAGT CTTACAGTGT ACCGGATGGG GCAAACCCCC 121 AAACACCCTA GCCGAGTACG CCTTGGACCA GTTTAGCAAC TTAGATTTTT GGGACATTTC 181 TTTAGTCGAT GGATTTAATA TTCCAATGAC TTTTGCCCCA ACAAAACCTA GTGGAGGAAA 241 ATGTCACGCA ATTCATTGCA CGGCCAATAT AAATGGTGAA TGTCCTCGCG CCCTTAAGGT 301 ACCTGGAGGA TGTAACAACC CTTGTACCAC GTTTGGAGGA CAACAATATT GTTGCACCCA 361 AGGTCCATGT GGCCCTACAG AGTTGTCCAA ATTTTTCAAG AAAAGATGTC CCGATGCTTA 421 TAGCTACCCA CAAGACGATC CTACAAGCAC ATTTACTTGC CCTGGTGGTA GTACAAACTA 481 TAGGGTTGTC TTTTGTCCTA ATGGTGTTGC TGATCCAAAT TTCCCCTTGG AGATGCCTGC 541 AAGTACTGAT GAAGTGGCCA AGTGAATTTG AGTTTCTTCA TTTTAAATCG CCTCAATTAG 601 TCAACTGATC TCTACCGTAA TGAAAAATCT TAATAGCTCA GTTTTTTAAA TATTCACTTT 661 TACTTTATTG AT Predicted gene structure (within gDNA segment 13705 to 9439): Exon 1 11934 11337 ( 598 n); cDNA 2 602 ( 601 n); score: 0.879 MATCH C08HBa0235H18.1- SGN-E268624+ 0.879 598 0.890 C PGS_C08HBa0235H18.1-_SGN-E268624+ (11934 11337) Alignment (genomic DNA sequence = upper lines): ACTAAGATGG CACGTATATG GGGTCGTACG AATTGCAACT TTGATGGTGC TGGTAGAGGT 11875 |||||||||| |||||||||| ||||||||| |||||||| || ||| ||| || |||||| ACTAAGATGG CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT 61 TCATGTCAGA CTGGTGATTG TGGTGGGGTC TTGCAATGTA CCGGGTGGGG CAAACCACCA 11815 ||||||||| |||||||||| |||||| ||| || || |||| |||| ||||| |||||| ||| ACATGTCAGA CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA 121 AACACCCTGG CCGAGTACGC CTTGGACCAG TTTAGCAACC TAGATTTCTG GGACATTTCT 11755 |||||||| | |||||||||| |||||||||| ||||||||| ||||||| || |||||||||| AACACCCTAG CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT 181 TTAGTCGATG GATTTAATAT TCCAATGACT TTCGCCCCGA CCAATCCTAG TGGAGGGAAA 11695 |||||||||| |||||||||| |||||||||| || ||||| | | || ||||| |||||| ||| TTAGTCGATG GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA 241 TGCCATGCAA TTCATTGTAC GGCTAATATA AATGGTGAAT GTCCTGGTTC ACTTAGGGTA 11635 || || |||| ||||||| || ||| |||||| |||||||||| ||||| | | |||| |||| TGTCACGCAA TTCATTGCAC GGCCAATATA AATGGTGAAT GTCCTCGCGC CCTTAAGGTA 301 CCCGGAGGAT GTAACAATCC TTGTACCACG TTCGGAGGAC AACAATATTG TTGCACACAA 11575 || ||||||| ||||||| || |||||||||| || ||||||| |||||||||| |||||| ||| CCTGGAGGAT GTAACAACCC TTGTACCACG TTTGGAGGAC AACAATATTG TTGCACCCAA 361 GGTCCATGTG GCCCTACTGA TTTGTCGAGA TTTTTCAAAC AAAGATGTCC TGATGCGTAT 11515 |||||||||| ||||||| || ||||| | | |||||||| |||||||||| ||||| ||| GGTCCATGTG GCCCTACAGA GTTGTCCAAA TTTTTCAAGA AAAGATGTCC CGATGCTTAT 421 AGCTACCCAC AAGATGATCC TACTAGCACA TTTACTTGCC CTAGTGGTAG TACAAATTAT 11455 |||||||||| |||| ||||| ||| |||||| |||||||||| || ||||||| |||||| ||| AGCTACCCAC AAGACGATCC TACAAGCACA TTTACTTGCC CTGGTGGTAG TACAAACTAT 481 AGGGTTGTTT TTTGTCCTAA TGGTGTTACT AGCCCAAATT TCCCCTTGGA GATGCCCTCA 11395 |||||||| | |||||||||| ||||||| || ||||||| |||||||||| |||||| || AGGGTTGTCT TTTGTCCTAA TGGTGTTGCT GATCCAAATT TCCCCTTGGA GATGCCTGCA 541 AG---TGATG AAGAGGCTAA GTAAAATTGA GTCACTTTCT TTTAAATTGC TTGAAGTAGT 11338 || ||||| ||| ||| || || || |||| || ||| | ||||||| || | || |||| AGTACTGATG AAGTGGCCAA GTGAATTTGA GTTTCTTCAT TTTAAATCGC CTCAATTAGT 601 C 11337 | C 602 hqPGS_C08HBa0235H18.1-_SGN-E268624+ (11934 11337) ******************************************************************************** EST sequence 922 +strand 558 n (File: SGN-E206119+) 1 GGATGGGGCA AACCCCCAAA CACCCTAGCC GAGTACGCCT TGGACCAGTT TAGCAACTTA 61 GATTTTTGGG ACATTTCTTT AGTCGATGGA TTTAATATTC CAATGACTTT TGCCCCAACA 121 AAACCTAGTG GAGGAAAATG TCACGCAATT CATTGCACGG CCAATATAAA TGGTGAATGT 181 CCTCGCGCCC TTAAGGTACC TGGAGGATGT AACAACCCTT GTACCACGTT TGGAGGACAA 241 CAATATTGTT GCACCCAAGG TCCATGTGGC CCTACAGAGT TGTCCAAATT TTTCAAGAAA 301 AGATGTCCCG ATGCTTATAG CTACCCACAA GACGATCCTA CAAGCACATT TACTTGCCCT 361 GGTGGTAGTA CAAACTATAG GGTTGTCTTT TGTCCTAATG GTGTTGCTGA TCCAAATTTC 421 CCCTTGGAGA ATGCCTGAAG TACTGATGAA GTGGCCAAGT GAATTTGAGT TTCTTCATTT 481 TAAATCGCCT CAATTAGTCA ACTGATCTCT ACCGTAATGA AAAATCTTAA TAGCTCAGTT 541 TTTTAAATAT TCACTTTT Predicted gene structure (within gDNA segment 12675 to 9513): Exon 1 11832 11337 ( 496 n); cDNA 1 499 ( 499 n); score: 0.872 MATCH C08HBa0235H18.1- SGN-E206119+ 0.872 496 0.889 C PGS_C08HBa0235H18.1-_SGN-E206119+ (11832 11337) Alignment (genomic DNA sequence = upper lines): GGGTGGGGCA AACCACCAAA CACCCTGGCC GAGTACGCCT TGGACCAGTT TAGCAACCTA 11773 || ||||||| |||| ||||| |||||| ||| |||||||||| |||||||||| ||||||| || GGATGGGGCA AACCCCCAAA CACCCTAGCC GAGTACGCCT TGGACCAGTT TAGCAACTTA 60 GATTTCTGGG ACATTTCTTT AGTCGATGGA TTTAATATTC CAATGACTTT CGCCCCGACC 11713 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| || GATTTTTGGG ACATTTCTTT AGTCGATGGA TTTAATATTC CAATGACTTT TGCCCCAACA 120 AATCCTAGTG GAGGGAAATG CCATGCAATT CATTGTACGG CTAATATAAA TGGTGAATGT 11653 || ||||||| |||| ||||| || |||||| ||||| |||| | |||||||| |||||||||| AAACCTAGTG GAGGAAAATG TCACGCAATT CATTGCACGG CCAATATAAA TGGTGAATGT 180 CCTGGTTCAC TTAGGGTACC CGGAGGATGT AACAATCCTT GTACCACGTT CGGAGGACAA 11593 ||| | | | ||| |||||| ||||||||| ||||| |||| |||||||||| ||||||||| CCTCGCGCCC TTAAGGTACC TGGAGGATGT AACAACCCTT GTACCACGTT TGGAGGACAA 240 CAATATTGTT GCACACAAGG TCCATGTGGC CCTACTGATT TGTCGAGATT TTTCAAACAA 11533 |||||||||| |||| ||||| |||||||||| ||||| || | |||| | ||| |||||| || CAATATTGTT GCACCCAAGG TCCATGTGGC CCTACAGAGT TGTCCAAATT TTTCAAGAAA 300 AGATGTCCTG ATGCGTATAG CTACCCACAA GATGATCCTA CTAGCACATT TACTTGCCCT 11473 |||||||| | |||| ||||| |||||||||| || ||||||| | |||||||| |||||||||| AGATGTCCCG ATGCTTATAG CTACCCACAA GACGATCCTA CAAGCACATT TACTTGCCCT 360 AGTGGTAGTA CAAATTATAG GGTTGTTTTT TGTCCTAATG GTGTTACTAG CCCAAATTTC 11413 ||||||||| |||| ||||| |||||| ||| |||||||||| ||||| || ||||||||| GGTGGTAGTA CAAACTATAG GGTTGTCTTT TGTCCTAATG GTGTTGCTGA TCCAAATTTC 420 CCCTTGGAG- ATGCCCTCA- -AGTGATGAA GAGGCTAAGT AAAATTGAGT CACTTTCTTT 11356 ||||||||| ||||| | | ||||||| | ||| |||| || |||||| ||| ||| CCCTTGGAGA ATGCCTGAAG TACTGATGAA GTGGCCAAGT GAATTTGAGT TTCTTCATTT 480 TAAATTGCTT GAAGTAGTC 11337 ||||| || | || ||||| TAAATCGCCT CAATTAGTC 499 hqPGS_C08HBa0235H18.1-_SGN-E206119+ (11832 11337) ******************************************************************************** EST sequence 745 +strand 526 n (File: SGN-E255494+) 1 GCCTTGGACC AGTTTAGCAA CTTAGATTTT TGGGACATTT CTTTAGTCGA TGGATTTAAT 61 ATTCCAATGA CTTTTGCCCC AACAAAACCT AGTGGAGGAA AATGTCACGC AATTCATTGC 121 ACGGCCAATA TAAATGGTGA ATGTCCTCGC GCCCTTAAGG TACCTGGAGG ATGTAACAAC 181 CCTTGTACCA CGTTTGGAGG ACAACAATAT TGTTGCACCC AAGGTCCATG TGGCCCTACA 241 GAGTTGTCCA AATTTTTCAA GAAAAGATGT CCCGATGCTT ATAGCTACCC ACAAGACGAT 301 CCTACAAGCA CATTTACTTG CCCTGGTGGT AGTACAAACT ATAGGGTTGT CTTTTGTCCT 361 AATGGTGTTG CTGATCCAAA TTTCCCCTTG GAGATGCCTG CAAGTACTGA TGAAGTGGCC 421 AAGTGAATTT GAGTTTCTTC ATTTTAAATC GCCTCAATTA GTCAACTGAT CTCTACCGTA 481 ATGAAAAATC TTAATAGCTC AGTTTTTTAA ATATTCACTT TTACTT Predicted gene structure (within gDNA segment 12396 to 9509): Exon 1 11796 11337 ( 460 n); cDNA 1 463 ( 463 n); score: 0.873 MATCH C08HBa0235H18.1- SGN-E255494+ 0.873 460 0.875 C PGS_C08HBa0235H18.1-_SGN-E255494+ (11796 11337) Alignment (genomic DNA sequence = upper lines): GCCTTGGACC AGTTTAGCAA CCTAGATTTC TGGGACATTT CTTTAGTCGA TGGATTTAAT 11737 |||||||||| |||||||||| | ||||||| |||||||||| |||||||||| |||||||||| GCCTTGGACC AGTTTAGCAA CTTAGATTTT TGGGACATTT CTTTAGTCGA TGGATTTAAT 60 ATTCCAATGA CTTTCGCCCC GACCAATCCT AGTGGAGGGA AATGCCATGC AATTCATTGT 11677 |||||||||| |||| ||||| || || ||| |||||||| | |||| || || ||||||||| ATTCCAATGA CTTTTGCCCC AACAAAACCT AGTGGAGGAA AATGTCACGC AATTCATTGC 120 ACGGCTAATA TAAATGGTGA ATGTCCTGGT TCACTTAGGG TACCCGGAGG ATGTAACAAT 11617 ||||| |||| |||||||||| ||||||| | | |||| || |||| ||||| ||||||||| ACGGCCAATA TAAATGGTGA ATGTCCTCGC GCCCTTAAGG TACCTGGAGG ATGTAACAAC 180 CCTTGTACCA CGTTCGGAGG ACAACAATAT TGTTGCACAC AAGGTCCATG TGGCCCTACT 11557 |||||||||| |||| ||||| |||||||||| |||||||| | |||||||||| ||||||||| CCTTGTACCA CGTTTGGAGG ACAACAATAT TGTTGCACCC AAGGTCCATG TGGCCCTACA 240 GATTTGTCGA GATTTTTCAA ACAAAGATGT CCTGATGCGT ATAGCTACCC ACAAGATGAT 11497 || ||||| | ||||||||| |||||||| || ||||| | |||||||||| |||||| ||| GAGTTGTCCA AATTTTTCAA GAAAAGATGT CCCGATGCTT ATAGCTACCC ACAAGACGAT 300 CCTACTAGCA CATTTACTTG CCCTAGTGGT AGTACAAATT ATAGGGTTGT TTTTTGTCCT 11437 ||||| |||| |||||||||| |||| ||||| |||||||| | |||||||||| ||||||||| CCTACAAGCA CATTTACTTG CCCTGGTGGT AGTACAAACT ATAGGGTTGT CTTTTGTCCT 360 AATGGTGTTA CTAGCCCAAA TTTCCCCTTG GAGATGCCCT CAAG---TGA TGAAGAGGCT 11380 ||||||||| || ||||| |||||||||| |||||||| |||| ||| ||||| ||| AATGGTGTTG CTGATCCAAA TTTCCCCTTG GAGATGCCTG CAAGTACTGA TGAAGTGGCC 420 AAGTAAAATT GAGTCACTTT CTTTTAAATT GCTTGAAGTA GTC 11337 |||| || || |||| ||| |||||||| || | || || ||| AAGTGAATTT GAGTTTCTTC ATTTTAAATC GCCTCAATTA GTC 463 hqPGS_C08HBa0235H18.1-_SGN-E255494+ (11796 11337) ******************************************************************************** EST sequence 498 +strand 709 n (File: SGN-E350897+) 1 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 61 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 121 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 181 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 241 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 301 AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 361 GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC 421 CCAAGGTCCA TGTGGCCCTA CAGAGTTGTC CAAATTTTTC AAGAAAAGAT GTCCCGATGC 481 TTATAGCTAC CCACAAGACG ATCCTACAAG CACATTTACT TGCCCCTGGT GGTAGTACAA 541 ACTATAGGGT TGTCTTTTGT CCTAATGGGT GTGCTGATCC CNAATTCCCC TTGAGATGCC 601 TGCAAGTACT GATGAAGTGG CCAAGTGAAA TTGNNAGTTC TCATTTTAAT CGCCTCATTA 661 GTCAACTGAT CTCTACCGTA ATGAAAATCT TTATAGCTCA GTTTTTTAA Predicted gene structure (within gDNA segment 12634 to 9024): Exon 1 11997 11383 ( 615 n); cDNA 2 617 ( 616 n); score: 0.882 Intron 1 11382 10237 (1146 n); Pd: 0.747 (s: 0.68), Pa: 0.958 (s: 0) Exon 2 10236 10229 ( 8 n); cDNA 618 625 ( 8 n); score: 0.500 Intron 2 10228 9998 ( 231 n); Pd: 0.587 (s: 0), Pa: 0.983 (s: 0) Exon 3 9997 9992 ( 6 n); cDNA 626 631 ( 6 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E350897+ 0.882 629 0.887 C PGS_C08HBa0235H18.1-_SGN-E350897+ (11997 11383,10236 10229,9997 9992) Alignment (genomic DNA sequence = upper lines): CCAATAGGCG GTGGTCGACG TCTTGATCGA GGCCAAACAT GGGTCATCAA TGCACCGAGG 11938 || ||||||| |||||||||| ||| ||||| |||||||||| |||||||||| ||| |||||| CCGATAGGCG GTGGTCGACG TCTCAATCGA GGCCAAACAT GGGTCATCAA TGCTCCGAGG 61 GGCACTAAGA TGGCACGTAT ATGGGGTCGT ACGAATTGCA ACTTTGATGG TGCTGGTAGA 11878 || ||||||| |||||||||| |||||||||| || ||||| ||||| ||| ||| || ||| GGAACTAAGA TGGCACGTAT ATGGGGTCGT ACTGGTTGCA ACTTTAATGC TGCAGGCAGA 121 GGTTCATGTC AGACTGGTGA TTGTGGTGGG GTCTTGCAAT GTACCGGGTG GGGCAAACCA 11818 ||| |||||| |||||||||| ||||||||| ||||| || | ||||||| || ||||||||| GGTACATGTC AGACTGGTGA TTGTGGTGGA GTCTTACAGT GTACCGGATG GGGCAAACCC 181 CCAAACACCC TGGCCGAGTA CGCCTTGGAC CAGTTTAGCA ACCTAGATTT CTGGGACATT 11758 |||||||||| | |||||||| |||||||||| |||||||||| || ||||||| ||||||||| CCAAACACCC TAGCCGAGTA CGCCTTGGAC CAGTTTAGCA ACTTAGATTT TTGGGACATT 241 TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTCGCCC CGACCAATCC TAGTGGAGGG 11698 |||||||||| |||||||||| |||||||||| ||||| |||| | || || || ||||||||| TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTTGCCC CAACAAAACC TAGTGGAGGA 301 AAATGCCATG CAATTCATTG TACGGCTAAT ATAAATGGTG AATGTCCTGG TTCACTTAGG 11638 ||||| || | |||||||||| ||||| ||| |||||||||| |||||||| | | |||| | AAATGTCACG CAATTCATTG CACGGCCAAT ATAAATGGTG AATGTCCTCG CGCCCTTAAG 361 GTACCCGGAG GATGTAACAA TCCTTGTACC ACGTTCGGAG GACAACAATA TTGTTGCACA 11578 ||||| |||| |||||||||| ||||||||| ||||| |||| |||||||||| ||||||||| GTACCTGGAG GATGTAACAA CCCTTGTACC ACGTTTGGAG GACAACAATA TTGTTGCACC 421 CAAGGTCCAT GTGGCCCTAC TGATTTGTCG AGATTTTTCA AACAAAGATG TCCTGATGCG 11518 |||||||||| |||||||||| || ||||| | |||||||| | ||||||| ||| ||||| CAAGGTCCAT GTGGCCCTAC AGAGTTGTCC AAATTTTTCA AGAAAAGATG TCCCGATGCT 481 TATAGCTACC CACAAGATGA TCCTACTAGC ACATTTACTT G-CCCTAGTG GTAGTACAAA 11459 |||||||||| ||||||| || |||||| ||| |||||||||| | |||| ||| |||||||||| TATAGCTACC CACAAGACGA TCCTACAAGC ACATTTACTT GCCCCTGGTG GTAGTACAAA 541 TTATAGGGTT GTTTTTTGTC CTAAT-GGTG TTACTAGCCC AAATTTCCCC TTGGAGATGC 11400 ||||||||| || ||||||| ||||| |||| | | ||| || |||||| || ||||||| CTATAGGGTT GTCTTTTGTC CTAATGGGTG TGCTGATCCC NAA-TTCCCC TT-GAGATGC 599 CCTCAAGTGA TGAAG-AGGC TAAGTAAAAT TGAGTCACTT TCTTTTAAAT TGCTTGAAGT 11341 | ||||| ||| | || CTGCAAGTAC TGATGAAG.. .......... .......... .......... .......... 617 AGTCGAGTTA TATAATTGGC TTGTAATAAA CCTAATATAA TTACATGAAT AAAAGTCACA 11281 .......... .......... .......... .......... .......... .......... 617 TCATCACAAA TATGTTGTTT CGAATATTAT TTTATGTATA TTTTGTTATT TACGTATTAA 11221 .......... .......... .......... .......... .......... .......... 617 CTTGTCAAAT AAAAGAATAA TATCAGTCAG TTTAAAAACA TAAAAACTAT AATATACTGG 11161 .......... .......... .......... .......... .......... .......... 617 ATAAGATAAA TAAGAACATC TCACGAGATT ATTTTATCTC ATTTTTTTAT ATGATAAAAG 11101 .......... .......... .......... .......... .......... .......... 617 TTCCATCACA AAATATAAAA ATAAAATAAA TTAATCTCAA AAGTAACTAG TACCTTAAAA 11041 .......... .......... .......... .......... .......... .......... 617 TAATATAAAA TAAAATAATC CCATTTTATT AGAAATTATT ATCCACAATT TTAGGGCAAA 10981 .......... .......... .......... .......... .......... .......... 617 GTCAAAAGTA GATGGAAATA TTTGTTTATA GGCGGCTCTT AGAACATTTT CAAGCTAAAT 10921 .......... .......... .......... .......... .......... .......... 617 GATGTTAGCT GCACGTGCTA CTTGACACAA TGCCAAAAGA TTAAATTGAG CAAAATTTAT 10861 .......... .......... .......... .......... .......... .......... 617 ATTTTTATTA AAAAAAATTA TATTTATAAA CGTAGAAAAT TCACTATTTT TTTTTTATCA 10801 .......... .......... .......... .......... .......... .......... 617 TTAACATGTT TTACATATTT TAGAGGATTA AGAGTGAAAA AGATTCTAAT AACTTGTTAA 10741 .......... .......... .......... .......... .......... .......... 617 CTTGATATAA TAGATTAACA AGTTGATTAT ATCGCACTCT AAAGAATAAA ATGAATTGTC 10681 .......... .......... .......... .......... .......... .......... 617 AAAAATAATA TTAATAATTT ATCGCCACTC AAAAAAATAA AAAATATTGT AGAACGTGAC 10621 .......... .......... .......... .......... .......... .......... 617 TTTATCAATA CTAATCTCTT TTAAAACAAC GATTGATTTG AACTTCACCG AAATTGATGG 10561 .......... .......... .......... .......... .......... .......... 617 AATGAAATGA CTAAATATTG TATTGGGATA AAATAATGGG ATAATTGTAT ATAATAGCAA 10501 .......... .......... .......... .......... .......... .......... 617 ACTAATAACC TAAAATAAAT GGAGTAGCTA TGATTTGATT TAATTGTGCA CCATAGCAAA 10441 .......... .......... .......... .......... .......... .......... 617 CGTTAGCCAA AGTTTGTCAG TCGCCTCTCT CTCTTTATAC ACAAAAGTGT ATAAATTGTG 10381 .......... .......... .......... .......... .......... .......... 617 TTTCTGTTTT GTATAAGCGA GAGAAAACTG TATATACACA TGCAAAAACA TATATCTTCG 10321 .......... .......... .......... .......... .......... .......... 617 TGTTATACAC TTAATTATAC AATTTACAAA TATTTTACTT CAATTCAATT GTAGACAAAT 10261 .......... .......... .......... .......... .......... .......... 617 GCAAATTTTA TACAAATATT GCAGCGAAAA AGGCGAACGA ATTATACAAT TGCAGTGAAA 10201 | | || .......... .......... ....TGGCCA AG........ .......... .......... 625 TACAATTTTC TCTTGCTTTA TACAACAGAA GTGTATAAAT TGTGTTTATG TTTTTGTATA 10141 .......... .......... .......... .......... .......... .......... 625 AAGCGAGAGA AAAACATATA TTTTTTTCCT ATACACTTAT AATTATGCAA TATACATACA 10081 .......... .......... .......... .......... .......... .......... 625 TTTTACTTCG ATTCAATTGT ATGCAAAATA AATTTTATAC AAATATTGCA GAGAATTATA 10021 .......... .......... .......... .......... .......... .......... 625 CAATATGCAT TATACAATTG CAGTGAAAT 9992 |||||| .......... .......... ...TGAAAT 631 hqPGS_C08HBa0235H18.1-_SGN-E350897+ (11997 11383) ******************************************************************************** EST sequence 1208 +strand 805 n (File: SGN-E260562+) 1 AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 61 TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 121 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 181 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 241 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 301 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 361 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 421 AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 481 GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC 541 CCAAGGTCCA TGTGGCCCTA CAGAGTTGTC CAAATTTTTC AAGAAAAGAT GTCCCGATGC 601 TTATAGCTAC CCACAAGACG ATCCTACAAG CACATTTACT TGCCCTGGTG GTAGTACAAA 661 CTATAGGGTT GTCTTTTGTC CTAATGGTGT TGCTGATCCA AATTTCCCCT TGGAGATGCC 721 CTGCAGTACT GATGAAGTGG CCNAGTGAAT TTGAGTTTTC TCATTTTAAT CGCCCTCATT 781 AGTCACTGAT CTCTACCGTA ATGAA Predicted gene structure (within gDNA segment 13834 to 9957): Exon 1 12118 11384 ( 735 n); cDNA 1 735 ( 735 n); score: 0.898 MATCH C08HBa0235H18.1- SGN-E260562+ 0.898 735 0.913 C PGS_C08HBa0235H18.1-_SGN-E260562+ (12118 11384) Alignment (genomic DNA sequence = upper lines): AAACATGGCC TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG TGACTTACAC 12059 |||||||| | ||||||| || |||||||||| | ||||| | ||| || || ||||||| || AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 60 TTATGCTGCC ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG CGGCGTCGAC 11999 |||||||||| ||| | |||| |||||||||| |||||||||| ||||| |||| |||| ||||| TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 120 CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG 11939 || |||||| |||||||||| |||| |||| |||||||||| |||||||||| |||| ||||| TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 180 GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG 11879 ||| |||||| |||||||||| |||||||||| ||| |||| |||||| ||| ||| || || GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 240 AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC 11819 |||| ||||| |||||||||| |||||||||| ||||| || |||||||| | |||||||||| AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 300 ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT 11759 ||||||||| || ||||||| |||||||||| |||||||||| ||| |||||| | |||||||| CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 360 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG 11699 |||||||||| |||||||||| |||||||||| |||||| ||| || || || | |||||||||| TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 420 GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG 11639 ||||| || |||||||||| | ||||| || |||||||||| ||||||||| | | |||| AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 480 GGTACCCGGA GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT ATTGTTGCAC 11579 |||||| ||| |||||||||| | |||||||| |||||| ||| |||||||||| |||||||||| GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC 540 ACAAGGTCCA TGTGGCCCTA CTGATTTGTC GAGATTTTTC AAACAAAGAT GTCCTGATGC 11519 ||||||||| |||||||||| | || ||||| | ||||||| || |||||| |||| ||||| CCAAGGTCCA TGTGGCCCTA CAGAGTTGTC CAAATTTTTC AAGAAAAGAT GTCCCGATGC 600 GTATAGCTAC CCACAAGATG ATCCTACTAG CACATTTACT TGCCCTAGTG GTAGTACAAA 11459 ||||||||| |||||||| | ||||||| || |||||||||| |||||| ||| |||||||||| TTATAGCTAC CCACAAGACG ATCCTACAAG CACATTTACT TGCCCTGGTG GTAGTACAAA 660 TTATAGGGTT GTTTTTTGTC CTAATGGTGT TACTAGCCCA AATTTCCCCT TGGAGATGCC 11399 ||||||||| || ||||||| |||||||||| | || ||| |||||||||| |||||||||| CTATAGGGTT GTCTTTTGTC CTAATGGTGT TGCTGATCCA AATTTCCCCT TGGAGATGCC 720 CTCAAGTGAT GAAGA 11384 || ||| | || || CTGCAGTACT GATGA 735 hqPGS_C08HBa0235H18.1-_SGN-E260562+ (12118 11384) ******************************************************************************** EST sequence 484 +strand 786 n (File: SGN-E210798+) 1 TGACATCTTC TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 61 TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 121 GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 181 CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 241 CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 301 CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG 361 GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 421 TTCATTGCAC GGCCAATATA AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT 481 GTAACAACCC TTGTACCACG TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG 541 GCCCTACAGA GTTGTCCAAA TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC 601 AAGACGATCC TACAAGCACA TTTACTTGCC CNTGGTGGTA GTACAAACTA TAGGGTTGTC 661 TTTTGTCCTA ATGGTGTTGC TGATCCAAAT TTCCCCTTGG AGATGCCTGC AAGTACTGAT 721 GAAGTGGCCA AGTGAATTTG AGTTTCTTCA TTTTAAATCG CCCTCATTAG TCAACTGATC 781 TCTACC Predicted gene structure (within gDNA segment 13694 to 9999): Exon 1 12104 11384 ( 721 n); cDNA 1 722 ( 722 n); score: 0.894 MATCH C08HBa0235H18.1- SGN-E210798+ 0.894 721 0.917 C PGS_C08HBa0235H18.1-_SGN-E210798+ (12104 11384) Alignment (genomic DNA sequence = upper lines): TGAGATCTTC TTTTGTTTTC TTCCTTCTTG CTTTTGTGAC TTACACTTAT GCTGCCACTT 12045 ||| |||||| ||||||| || ||| | ||| || |||||| ||| |||||| ||||||||| TGACATCTTC TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 60 TCGAGGTACG CAACAACTGT CCATACACCG TCTGGGCGGC GTCGACCCCA ATAGGCGGTG 11985 | |||||||| |||||||||| |||||||||| | |||||||| ||||| || |||||||||| TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 120 GTCGACGTCT TGATCGAGGC CAAACATGGG TCATCAATGC ACCGAGGGGC ACTAAGATGG 11925 |||||||||| |||||||| |||||||||| |||||||||| |||||||| |||||||||| GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 180 CACGTATATG GGGTCGTACG AATTGCAACT TTGATGGTGC TGGTAGAGGT TCATGTCAGA 11865 |||||||||| ||||||||| |||||||| || ||| ||| || |||||| ||||||||| CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 240 CTGGTGATTG TGGTGGGGTC TTGCAATGTA CCGGGTGGGG CAAACCACCA AACACCCTGG 11805 |||||||||| |||||| ||| || || |||| |||| ||||| |||||| ||| |||||||| | CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 300 CCGAGTACGC CTTGGACCAG TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG 11745 |||||||||| |||||||||| ||||||||| ||||||| || |||||||||| |||||||||| CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG 360 GATTTAATAT TCCAATGACT TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA 11685 |||||||||| |||||||||| || ||||| | | || ||||| |||||| ||| || || |||| GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 420 TTCATTGTAC GGCTAATATA AATGGTGAAT GTCCTGGTTC ACTTAGGGTA CCCGGAGGAT 11625 ||||||| || ||| |||||| |||||||||| ||||| | | |||| |||| || ||||||| TTCATTGCAC GGCCAATATA AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT 480 GTAACAATCC TTGTACCACG TTCGGAGGAC AACAATATTG TTGCACACAA GGTCCATGTG 11565 ||||||| || |||||||||| || ||||||| |||||||||| |||||| ||| |||||||||| GTAACAACCC TTGTACCACG TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG 540 GCCCTACTGA TTTGTCGAGA TTTTTCAAAC AAAGATGTCC TGATGCGTAT AGCTACCCAC 11505 ||||||| || ||||| | | |||||||| |||||||||| ||||| ||| |||||||||| GCCCTACAGA GTTGTCCAAA TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC 600 AAGATGATCC TACTAGCACA TTTACTTGCC C-TAGTGGTA GTACAAATTA TAGGGTTGTT 11446 |||| ||||| ||| |||||| |||||||||| | | |||||| ||||||| || ||||||||| AAGACGATCC TACAAGCACA TTTACTTGCC CNTGGTGGTA GTACAAACTA TAGGGTTGTC 660 TTTTGTCCTA ATGGTGTTAC TAGCCCAAAT TTCCCCTTGG AGATGCCCTC AAGTGATGAA 11386 |||||||||| |||||||| | | |||||| |||||||||| ||||||| | |||| ||| TTTTGTCCTA ATGGTGTTGC TGATCCAAAT TTCCCCTTGG AGATGCCTGC AAGTACTGAT 720 GA 11384 || GA 722 hqPGS_C08HBa0235H18.1-_SGN-E210798+ (12104 11384) ******************************************************************************** EST sequence 533 +strand 710 n (File: SGN-E263607+) 1 TTTGTTCTCT TCTTCCTTCT TTGTGTGACT TATACTTATG CTGCCACTAT TGAGGTACGC 61 AACAACTGTC CATACACCGT TTGGGCGGCA TCGACTCCGA TAGGCGGTGG TCGACGTCTC 121 AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC ACGTATATGG 181 GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC TGGTGATTGT 241 GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC CGAGTACGCC 301 TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG ATTTAATATT 361 CCAATGACTT TTGCCCCAAC AAAACCTAGT GGAGGAAAAT GTCACGCAAT TCATTGCACG 421 GCCAATATAA ATGGTGAATG TCCTCGCGCC CTTAAGGTAC CTGGAGGATG TAACAACCCT 481 TGTACCACGT TTGGAGGACA ACAATATTGT TGCACCCAAG GTCCATGTGG CCCTACAGAG 541 TTGTCCAAAT TTTTCAAGAA AAGATGTCCC GATGCTTATA GCTACCCACA AGACGATCCT 601 ACAAGCACAT TTACTTGCCC TGGTGGTAGT ACAAACTATA NGGTTGTCTT TTGTCCTAAT 661 GGTGTTGCTG ATCCAAATTT CCCCTTGGAG ATGCCTGCAA GTACTGATGA Predicted gene structure (within gDNA segment 13584 to 10639): Exon 1 12093 11384 ( 710 n); cDNA 1 710 ( 710 n); score: 0.896 MATCH C08HBa0235H18.1- SGN-E263607+ 0.896 710 1.000 C PGS_C08HBa0235H18.1-_SGN-E263607+ (12093 11384) Alignment (genomic DNA sequence = upper lines): TTTGTTTTCT TCCTTCTTGC TTTTGTGACT TACACTTATG CTGCCACTTT CGAGGTACGC 12034 |||||| ||| || | ||| || ||||||| || ||||||| |||||||| | ||||||||| TTTGTTCTCT TCTTCCTTCT TTGTGTGACT TATACTTATG CTGCCACTAT TGAGGTACGC 60 AACAACTGTC CATACACCGT CTGGGCGGCG TCGACCCCAA TAGGCGGTGG TCGACGTCTT 11974 |||||||||| |||||||||| |||||||| ||||| || | |||||||||| ||||||||| AACAACTGTC CATACACCGT TTGGGCGGCA TCGACTCCGA TAGGCGGTGG TCGACGTCTC 120 GATCGAGGCC AAACATGGGT CATCAATGCA CCGAGGGGCA CTAAGATGGC ACGTATATGG 11914 ||||||||| |||||||||| ||||||||| |||||||| | |||||||||| |||||||||| AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC ACGTATATGG 180 GGTCGTACGA ATTGCAACTT TGATGGTGCT GGTAGAGGTT CATGTCAGAC TGGTGATTGT 11854 |||||||| ||||||||| | ||| ||| || |||||| |||||||||| |||||||||| GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC TGGTGATTGT 240 GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA ACACCCTGGC CGAGTACGCC 11794 ||||| |||| | || ||||| ||| |||||| ||||| |||| ||||||| || |||||||||| GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC CGAGTACGCC 300 TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG ATTTAATATT 11734 |||||||||| |||||||| | |||||| ||| |||||||||| |||||||||| |||||||||| TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG ATTTAATATT 360 CCAATGACTT TCGCCCCGAC CAATCCTAGT GGAGGGAAAT GCCATGCAAT TCATTGTACG 11674 |||||||||| | ||||| || || |||||| ||||| |||| | || ||||| |||||| ||| CCAATGACTT TTGCCCCAAC AAAACCTAGT GGAGGAAAAT GTCACGCAAT TCATTGCACG 420 GCTAATATAA ATGGTGAATG TCCTGGTTCA CTTAGGGTAC CCGGAGGATG TAACAATCCT 11614 || ||||||| |||||||||| |||| | | |||| ||||| | |||||||| |||||| ||| GCCAATATAA ATGGTGAATG TCCTCGCGCC CTTAAGGTAC CTGGAGGATG TAACAACCCT 480 TGTACCACGT TCGGAGGACA ACAATATTGT TGCACACAAG GTCCATGTGG CCCTACTGAT 11554 |||||||||| | |||||||| |||||||||| ||||| |||| |||||||||| |||||| || TGTACCACGT TTGGAGGACA ACAATATTGT TGCACCCAAG GTCCATGTGG CCCTACAGAG 540 TTGTCGAGAT TTTTCAAACA AAGATGTCCT GATGCGTATA GCTACCCACA AGATGATCCT 11494 ||||| | || ||||||| | ||||||||| ||||| |||| |||||||||| ||| |||||| TTGTCCAAAT TTTTCAAGAA AAGATGTCCC GATGCTTATA GCTACCCACA AGACGATCCT 600 ACTAGCACAT TTACTTGCCC TAGTGGTAGT ACAAATTATA GGGTTGTTTT TTGTCCTAAT 11434 || ||||||| |||||||||| | |||||||| ||||| |||| |||||| || |||||||||| ACAAGCACAT TTACTTGCCC TGGTGGTAGT ACAAACTATA NGGTTGTCTT TTGTCCTAAT 660 GGTGTTACTA GCCCAAATTT CCCCTTGGAG ATGCCCTCAA GTGATGAAGA 11384 |||||| || |||||||| |||||||||| ||||| ||| || ||| || GGTGTTGCTG ATCCAAATTT CCCCTTGGAG ATGCCTGCAA GTACTGATGA 710 hqPGS_C08HBa0235H18.1-_SGN-E263607+ (12093 11384) ******************************************************************************** EST sequence 852 +strand 713 n (File: SGN-E214128+) 1 TATACTTATG CTGCCACTAT TGAGGTACGC AACAACTGTC CATACACCGT TTGGGCGGCA 61 TCGACTCCGA TAGGCGGTGG TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT 121 CCGAGGGGAA CTAAGATGGC ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA 181 GGCAGAGGTA CATGTCAGAC TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC 241 AAACCCCCAA ACACCCTAGC CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG 301 GACATTTCTT TAGTCGATGG ATTTAATATT CCAATGACTT TTGCCCCAAC AAAACCTAGT 361 GGAGGAAAAT GTCACGCAAT TCATTGCACG GCCAATATAA ATGGTGAATG TCCTCGCGCC 421 CTTAAGGTAC CTGGAGGATG TAACAACCCT TGTACCACGT TTGGAGGACA ACAATATTGT 481 TGCACCCAAG GTCCATGTGG CCCTACAGAG TTGTCCAAAT TTTTCAAGAA AAGATGTCCC 541 GATGCTTATA GCTACCCACA AGACGATCCT ACAAGCACAT TTACTTGCCC TGGTGGTAGT 601 ACAAACTATA GGGTTGTCTT TTGTCCTAAT GGTNGTGCTG ATCCAATTTC CCCTTGGAGA 661 TGCCCTGCAG TACTGATGAA GTGGCCAAGT GATTTGAGTT TCTTCATTTA AAT Predicted gene structure (within gDNA segment 13284 to 9643): Exon 1 12063 11384 ( 680 n); cDNA 1 679 ( 679 n); score: 0.897 MATCH C08HBa0235H18.1- SGN-E214128+ 0.897 680 0.954 C PGS_C08HBa0235H18.1-_SGN-E214128+ (12063 11384) Alignment (genomic DNA sequence = upper lines): TACACTTATG CTGCCACTTT CGAGGTACGC AACAACTGTC CATACACCGT CTGGGCGGCG 12004 || ||||||| |||||||| | ||||||||| |||||||||| |||||||||| |||||||| TATACTTATG CTGCCACTAT TGAGGTACGC AACAACTGTC CATACACCGT TTGGGCGGCA 60 TCGACCCCAA TAGGCGGTGG TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA 11944 ||||| || | |||||||||| ||||||||| ||||||||| |||||||||| ||||||||| TCGACTCCGA TAGGCGGTGG TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT 120 CCGAGGGGCA CTAAGATGGC ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT 11884 |||||||| | |||||||||| |||||||||| |||||||| ||||||||| | ||| ||| CCGAGGGGAA CTAAGATGGC ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA 180 GGTAGAGGTT CATGTCAGAC TGGTGATTGT GGTGGGGTCT TGCAATGTAC CGGGTGGGGC 11824 || |||||| |||||||||| |||||||||| ||||| |||| | || ||||| ||| |||||| GGCAGAGGTA CATGTCAGAC TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC 240 AAACCACCAA ACACCCTGGC CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG 11764 ||||| |||| ||||||| || |||||||||| |||||||||| |||||||| | |||||| ||| AAACCCCCAA ACACCCTAGC CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG 300 GACATTTCTT TAGTCGATGG ATTTAATATT CCAATGACTT TCGCCCCGAC CAATCCTAGT 11704 |||||||||| |||||||||| |||||||||| |||||||||| | ||||| || || |||||| GACATTTCTT TAGTCGATGG ATTTAATATT CCAATGACTT TTGCCCCAAC AAAACCTAGT 360 GGAGGGAAAT GCCATGCAAT TCATTGTACG GCTAATATAA ATGGTGAATG TCCTGGTTCA 11644 ||||| |||| | || ||||| |||||| ||| || ||||||| |||||||||| |||| | | GGAGGAAAAT GTCACGCAAT TCATTGCACG GCCAATATAA ATGGTGAATG TCCTCGCGCC 420 CTTAGGGTAC CCGGAGGATG TAACAATCCT TGTACCACGT TCGGAGGACA ACAATATTGT 11584 |||| ||||| | |||||||| |||||| ||| |||||||||| | |||||||| |||||||||| CTTAAGGTAC CTGGAGGATG TAACAACCCT TGTACCACGT TTGGAGGACA ACAATATTGT 480 TGCACACAAG GTCCATGTGG CCCTACTGAT TTGTCGAGAT TTTTCAAACA AAGATGTCCT 11524 ||||| |||| |||||||||| |||||| || ||||| | || ||||||| | ||||||||| TGCACCCAAG GTCCATGTGG CCCTACAGAG TTGTCCAAAT TTTTCAAGAA AAGATGTCCC 540 GATGCGTATA GCTACCCACA AGATGATCCT ACTAGCACAT TTACTTGCCC TAGTGGTAGT 11464 ||||| |||| |||||||||| ||| |||||| || ||||||| |||||||||| | |||||||| GATGCTTATA GCTACCCACA AGACGATCCT ACAAGCACAT TTACTTGCCC TGGTGGTAGT 600 ACAAATTATA GGGTTGTTTT TTGTCCTAAT GGTGTTACTA GCCCAAATTT CCCCTTGGAG 11404 ||||| |||| ||||||| || |||||||||| ||| | || | | ||||| |||||||||| ACAAACTATA GGGTTGTCTT TTGTCCTAAT GGTNGTGCT- GATCCAATTT CCCCTTGGAG 659 ATGCCCTCAA GTGATGAAGA 11384 ||||||| | || ||| || ATGCCCTGCA GTACTGATGA 679 hqPGS_C08HBa0235H18.1-_SGN-E214128+ (12063 11384) ******************************************************************************** EST sequence 539 +strand 750 n (File: SGN-E263617+) 1 ACTTATGCTG CCACTATTGA GGTACGCAAC AACTGTCCAT ACACCGTTTG GGCGGCATCG 61 ACTCCGATAG GCGGTGGTCG ACGTCTCAAT CGAGGCCAAA CATGGGTCAT CAATGCTCCG 121 AGGGGAACTA AGATGGCACG TATATGGGGT CGTACTGGTT GCAACTTTAA TGCTGCAGGC 181 AGAGGTACAT GTCAGACTGG TGATTGTGGT GGAGTCTTAC AGTGTACCGG ATGGGGCAAA 241 CCCCCAAACA CCCTAGCCGA GTACGCCTTG GACCAGTTTA GCAACTTAGA TTTTTGGGAC 301 ATTTCTTTAG TCGATGGATT TAATATTCCA ATGACTTTTG CCCCAACAAA ACCTAGTGGA 361 GGAAAATGTC ACGCAATTCA TTGCACGGCC AATATAAATG GTGAATGTCC TCGCGCCCTT 421 AAGGTACCTG GAGGATGTAA CAACCCTTGT ACCACGTTTG GAGGACAACA ATATTGTTGC 481 ACCCAAGGTC CATGTGGCCC TACAGAGTTG TCCAAATTTT TCAAGAAAAG ATGTCCCGAT 541 GCTTATAGCT ACCCACAAGA CGATCCTACA AGCACATTTA CTTGCCCTGG TGGTAGTACA 601 AACTATAGGG TTGTCTTTTG TCCTAATGGT GTTGCTGATC CAAATTTCCC CTTGGAGATG 661 CCTGCAAGTA CTGATGAAGT GGCCAAGTGA ATTTGAGTTT CTTCATTTTA AATCGCCTNC 721 ATTAGTCAAC TGATCTCTAC CGTAATGAAA Predicted gene structure (within gDNA segment 13254 to 9909): Exon 1 12060 11384 ( 677 n); cDNA 1 677 ( 677 n); score: 0.903 MATCH C08HBa0235H18.1- SGN-E263617+ 0.903 677 0.903 C PGS_C08HBa0235H18.1-_SGN-E263617+ (12060 11384) Alignment (genomic DNA sequence = upper lines): ACTTATGCTG CCACTTTCGA GGTACGCAAC AACTGTCCAT ACACCGTCTG GGCGGCGTCG 12001 |||||||||| ||||| | || |||||||||| |||||||||| ||||||| || |||||| ||| ACTTATGCTG CCACTATTGA GGTACGCAAC AACTGTCCAT ACACCGTTTG GGCGGCATCG 60 ACCCCAATAG GCGGTGGTCG ACGTCTTGAT CGAGGCCAAA CATGGGTCAT CAATGCACCG 11941 || || |||| |||||||||| |||||| || |||||||||| |||||||||| |||||| ||| ACTCCGATAG GCGGTGGTCG ACGTCTCAAT CGAGGCCAAA CATGGGTCAT CAATGCTCCG 120 AGGGGCACTA AGATGGCACG TATATGGGGT CGTACGAATT GCAACTTTGA TGGTGCTGGT 11881 ||||| |||| |||||||||| |||||||||| ||||| || |||||||| | || ||| || AGGGGAACTA AGATGGCACG TATATGGGGT CGTACTGGTT GCAACTTTAA TGCTGCAGGC 180 AGAGGTTCAT GTCAGACTGG TGATTGTGGT GGGGTCTTGC AATGTACCGG GTGGGGCAAA 11821 |||||| ||| |||||||||| |||||||||| || ||||| | | |||||||| ||||||||| AGAGGTACAT GTCAGACTGG TGATTGTGGT GGAGTCTTAC AGTGTACCGG ATGGGGCAAA 240 CCACCAAACA CCCTGGCCGA GTACGCCTTG GACCAGTTTA GCAACCTAGA TTTCTGGGAC 11761 || ||||||| |||| ||||| |||||||||| |||||||||| ||||| |||| ||| |||||| CCCCCAAACA CCCTAGCCGA GTACGCCTTG GACCAGTTTA GCAACTTAGA TTTTTGGGAC 300 ATTTCTTTAG TCGATGGATT TAATATTCCA ATGACTTTCG CCCCGACCAA TCCTAGTGGA 11701 |||||||||| |||||||||| |||||||||| |||||||| | |||| || || ||||||||| ATTTCTTTAG TCGATGGATT TAATATTCCA ATGACTTTTG CCCCAACAAA ACCTAGTGGA 360 GGGAAATGCC ATGCAATTCA TTGTACGGCT AATATAAATG GTGAATGTCC TGGTTCACTT 11641 || ||||| | | |||||||| ||| ||||| |||||||||| |||||||||| | | | ||| GGAAAATGTC ACGCAATTCA TTGCACGGCC AATATAAATG GTGAATGTCC TCGCGCCCTT 420 AGGGTACCCG GAGGATGTAA CAATCCTTGT ACCACGTTCG GAGGACAACA ATATTGTTGC 11581 | |||||| | |||||||||| ||| |||||| |||||||| | |||||||||| |||||||||| AAGGTACCTG GAGGATGTAA CAACCCTTGT ACCACGTTTG GAGGACAACA ATATTGTTGC 480 ACACAAGGTC CATGTGGCCC TACTGATTTG TCGAGATTTT TCAAACAAAG ATGTCCTGAT 11521 || ||||||| |||||||||| ||| || ||| || | ||||| |||| |||| |||||| ||| ACCCAAGGTC CATGTGGCCC TACAGAGTTG TCCAAATTTT TCAAGAAAAG ATGTCCCGAT 540 GCGTATAGCT ACCCACAAGA TGATCCTACT AGCACATTTA CTTGCCCTAG TGGTAGTACA 11461 || ||||||| |||||||||| |||||||| |||||||||| |||||||| | |||||||||| GCTTATAGCT ACCCACAAGA CGATCCTACA AGCACATTTA CTTGCCCTGG TGGTAGTACA 600 AATTATAGGG TTGTTTTTTG TCCTAATGGT GTTACTAGCC CAAATTTCCC CTTGGAGATG 11401 || ||||||| |||| ||||| |||||||||| ||| || | |||||||||| |||||||||| AACTATAGGG TTGTCTTTTG TCCTAATGGT GTTGCTGATC CAAATTTCCC CTTGGAGATG 660 CCCTCAAGTG ATGAAGA 11384 || ||||| ||| || CCTGCAAGTA CTGATGA 677 hqPGS_C08HBa0235H18.1-_SGN-E263617+ (12060 11384) ******************************************************************************** EST sequence 682 +strand 753 n (File: SGN-E212205+) 1 TATGCTGCCA CTATTGAGGT ACGCAACAAC TGTCCATACA CCGTTTGGGC GGCATCGACT 61 CCGATAGGCG GTGGTCGACG TCTCAATCGA GGCCAAACAT GGGTCATCAA TGCTCCGAGG 121 GGAACTAAGA TGGCACGTAT ATGGGGTCGT ACTGGTTGCA ACTTTAATGC TGCAGGCAGA 181 GGTACATGTC AGACTGGTGA TTGTGGTGGA GTCTTACAGT GTACCGGATG GGGCAAACCC 241 CCAAACACCC TAGCCGAGTA CGCCTTGGAC CAGTTTAGCA ACTTAGATTT TTGGGACATT 301 TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTTGCCC CAACAAAACC TAGTGGAGGA 361 AAATGTCACG CAATTCATTG CACGGCCAAT ATAAATGGTG AATGTCCTCG CGCCCTTAAG 421 GTACCTGGAG GATGTAACAA CCCTTGTACC ACGTTTGGAG GACAACAATA TTGTTGCACC 481 CAAGGTCCAT GTGGCCCTAC AGAGTTGTCC AAATTTTTCA AGAAAAGATG TCCCGATGCT 541 TATAGCTACC CACAAGACGA TCCTACAAGC ACATTTACTT GCCCNTGGTG GTAGTACAAA 601 CTATAGGGTT GTCTTTTGTC CTAATGGTGT TGCTGATCCA AATTTCCCCT TGGAGATGCC 661 TGCAAGTACT GATGAAGTGG CCAAGTGAAT TTGAGTTTCT TCATTTAAAT CGCCTCAATT 721 AGTCAACTGA TCTCTACCGT AATGAAAATC TTA Predicted gene structure (within gDNA segment 13224 to 9859): Exon 1 12057 11384 ( 674 n); cDNA 1 675 ( 675 n); score: 0.898 MATCH C08HBa0235H18.1- SGN-E212205+ 0.898 674 0.895 C PGS_C08HBa0235H18.1-_SGN-E212205+ (12057 11384) Alignment (genomic DNA sequence = upper lines): TATGCTGCCA CTTTCGAGGT ACGCAACAAC TGTCCATACA CCGTCTGGGC GGCGTCGACC 11998 |||||||||| || | ||||| |||||||||| |||||||||| |||| ||||| ||| ||||| TATGCTGCCA CTATTGAGGT ACGCAACAAC TGTCCATACA CCGTTTGGGC GGCATCGACT 60 CCAATAGGCG GTGGTCGACG TCTTGATCGA GGCCAAACAT GGGTCATCAA TGCACCGAGG 11938 || ||||||| |||||||||| ||| ||||| |||||||||| |||||||||| ||| |||||| CCGATAGGCG GTGGTCGACG TCTCAATCGA GGCCAAACAT GGGTCATCAA TGCTCCGAGG 120 GGCACTAAGA TGGCACGTAT ATGGGGTCGT ACGAATTGCA ACTTTGATGG TGCTGGTAGA 11878 || ||||||| |||||||||| |||||||||| || ||||| ||||| ||| ||| || ||| GGAACTAAGA TGGCACGTAT ATGGGGTCGT ACTGGTTGCA ACTTTAATGC TGCAGGCAGA 180 GGTTCATGTC AGACTGGTGA TTGTGGTGGG GTCTTGCAAT GTACCGGGTG GGGCAAACCA 11818 ||| |||||| |||||||||| ||||||||| ||||| || | ||||||| || ||||||||| GGTACATGTC AGACTGGTGA TTGTGGTGGA GTCTTACAGT GTACCGGATG GGGCAAACCC 240 CCAAACACCC TGGCCGAGTA CGCCTTGGAC CAGTTTAGCA ACCTAGATTT CTGGGACATT 11758 |||||||||| | |||||||| |||||||||| |||||||||| || ||||||| ||||||||| CCAAACACCC TAGCCGAGTA CGCCTTGGAC CAGTTTAGCA ACTTAGATTT TTGGGACATT 300 TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTCGCCC CGACCAATCC TAGTGGAGGG 11698 |||||||||| |||||||||| |||||||||| ||||| |||| | || || || ||||||||| TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTTGCCC CAACAAAACC TAGTGGAGGA 360 AAATGCCATG CAATTCATTG TACGGCTAAT ATAAATGGTG AATGTCCTGG TTCACTTAGG 11638 ||||| || | |||||||||| ||||| ||| |||||||||| |||||||| | | |||| | AAATGTCACG CAATTCATTG CACGGCCAAT ATAAATGGTG AATGTCCTCG CGCCCTTAAG 420 GTACCCGGAG GATGTAACAA TCCTTGTACC ACGTTCGGAG GACAACAATA TTGTTGCACA 11578 ||||| |||| |||||||||| ||||||||| ||||| |||| |||||||||| ||||||||| GTACCTGGAG GATGTAACAA CCCTTGTACC ACGTTTGGAG GACAACAATA TTGTTGCACC 480 CAAGGTCCAT GTGGCCCTAC TGATTTGTCG AGATTTTTCA AACAAAGATG TCCTGATGCG 11518 |||||||||| |||||||||| || ||||| | |||||||| | ||||||| ||| ||||| CAAGGTCCAT GTGGCCCTAC AGAGTTGTCC AAATTTTTCA AGAAAAGATG TCCCGATGCT 540 TATAGCTACC CACAAGATGA TCCTACTAGC ACATTTACTT GCCC-TAGTG GTAGTACAAA 11459 |||||||||| ||||||| || |||||| ||| |||||||||| |||| | ||| |||||||||| TATAGCTACC CACAAGACGA TCCTACAAGC ACATTTACTT GCCCNTGGTG GTAGTACAAA 600 TTATAGGGTT GTTTTTTGTC CTAATGGTGT TACTAGCCCA AATTTCCCCT TGGAGATGCC 11399 ||||||||| || ||||||| |||||||||| | || ||| |||||||||| |||||||||| CTATAGGGTT GTCTTTTGTC CTAATGGTGT TGCTGATCCA AATTTCCCCT TGGAGATGCC 660 CTCAAGTGAT GAAGA 11384 ||||| | || || TGCAAGTACT GATGA 675 hqPGS_C08HBa0235H18.1-_SGN-E212205+ (12057 11384) ******************************************************************************** EST sequence 696 +strand 726 n (File: SGN-E213837+) 1 ATTGAGGTAC GCAACAACTG TCCATACACC GTTTGGGCGG CATCGACTCC GATAGGCGGT 61 GGTCGACGTC TCAATCGAGG CCAAACATGG GTCATCAATG CTCCGAGGGG AACTAAGATG 121 GCACGTATAT GGGGTCGTAC TGGTTGCAAC TTTAATGCTG CAGGCAGAGG TACATGTCAG 181 ACTGGTGATT GTGGTGGAGT CTTACAGTGT ACCGGATGGG GCAAACCCCC AAACACCCTA 241 GCCGAGTACG CCTTGGACCA GTTTAGCAAC TTAGATTTTT GGGACATTTC TTTAGTCGAT 301 GGATTTAATA TTCCAATGAC TTTTGCCCCA ACAAAACCTA GTGGAGGAAA ATGTCACGCA 361 ATTCATTGCA CGGCCAATAT AAATGGTGAA TGTCCTCGCG CCCTTAAGGT ACCTGGAGGA 421 TGTAACAACC CTTGTACCAC GTTTGGAGGA CAACAATATT GTTGCACCCA AGGTCCATGT 481 GGCCCTACAG AGTTGTCCAA ATTTTTCAAG AAAAGATGTC CCGATGCTTA TAGCTACCCA 541 CAAGACGATC CTACAAGCAC ATTTACTTGC CCTGGTGGTA GTACAAACTA TANGGTTGTC 601 TTTTGTCCTA ATGGTGTTGC TGATCCAAAT TTCCCCTTGG AGATGCCTGC AAGTACTGAT 661 GAAGTGGCCA AGTGAATTTG AGTTTCTTCA TTTTAAATCG CCTNCATTAG TCAACTGATC 721 TCTACC Predicted gene structure (within gDNA segment 13104 to 9999): Exon 1 12042 11384 ( 659 n); cDNA 4 662 ( 659 n); score: 0.901 MATCH C08HBa0235H18.1- SGN-E213837+ 0.901 659 0.908 C PGS_C08HBa0235H18.1-_SGN-E213837+ (12042 11384) Alignment (genomic DNA sequence = upper lines): GAGGTACGCA ACAACTGTCC ATACACCGTC TGGGCGGCGT CGACCCCAAT AGGCGGTGGT 11983 |||||||||| |||||||||| ||||||||| |||||||| | |||| || || |||||||||| GAGGTACGCA ACAACTGTCC ATACACCGTT TGGGCGGCAT CGACTCCGAT AGGCGGTGGT 63 CGACGTCTTG ATCGAGGCCA AACATGGGTC ATCAATGCAC CGAGGGGCAC TAAGATGGCA 11923 |||||||| |||||||||| |||||||||| |||||||| | ||||||| || |||||||||| CGACGTCTCA ATCGAGGCCA AACATGGGTC ATCAATGCTC CGAGGGGAAC TAAGATGGCA 123 CGTATATGGG GTCGTACGAA TTGCAACTTT GATGGTGCTG GTAGAGGTTC ATGTCAGACT 11863 |||||||||| ||||||| |||||||||| ||| ||| | | |||||| | |||||||||| CGTATATGGG GTCGTACTGG TTGCAACTTT AATGCTGCAG GCAGAGGTAC ATGTCAGACT 183 GGTGATTGTG GTGGGGTCTT GCAATGTACC GGGTGGGGCA AACCACCAAA CACCCTGGCC 11803 |||||||||| |||| ||||| || |||||| || ||||||| |||| ||||| |||||| ||| GGTGATTGTG GTGGAGTCTT ACAGTGTACC GGATGGGGCA AACCCCCAAA CACCCTAGCC 243 GAGTACGCCT TGGACCAGTT TAGCAACCTA GATTTCTGGG ACATTTCTTT AGTCGATGGA 11743 |||||||||| |||||||||| ||||||| || ||||| |||| |||||||||| |||||||||| GAGTACGCCT TGGACCAGTT TAGCAACTTA GATTTTTGGG ACATTTCTTT AGTCGATGGA 303 TTTAATATTC CAATGACTTT CGCCCCGACC AATCCTAGTG GAGGGAAATG CCATGCAATT 11683 |||||||||| |||||||||| ||||| || || ||||||| |||| ||||| || |||||| TTTAATATTC CAATGACTTT TGCCCCAACA AAACCTAGTG GAGGAAAATG TCACGCAATT 363 CATTGTACGG CTAATATAAA TGGTGAATGT CCTGGTTCAC TTAGGGTACC CGGAGGATGT 11623 ||||| |||| | |||||||| |||||||||| ||| | | | ||| |||||| ||||||||| CATTGCACGG CCAATATAAA TGGTGAATGT CCTCGCGCCC TTAAGGTACC TGGAGGATGT 423 AACAATCCTT GTACCACGTT CGGAGGACAA CAATATTGTT GCACACAAGG TCCATGTGGC 11563 ||||| |||| |||||||||| ||||||||| |||||||||| |||| ||||| |||||||||| AACAACCCTT GTACCACGTT TGGAGGACAA CAATATTGTT GCACCCAAGG TCCATGTGGC 483 CCTACTGATT TGTCGAGATT TTTCAAACAA AGATGTCCTG ATGCGTATAG CTACCCACAA 11503 ||||| || | |||| | ||| |||||| || |||||||| | |||| ||||| |||||||||| CCTACAGAGT TGTCCAAATT TTTCAAGAAA AGATGTCCCG ATGCTTATAG CTACCCACAA 543 GATGATCCTA CTAGCACATT TACTTGCCCT AGTGGTAGTA CAAATTATAG GGTTGTTTTT 11443 || ||||||| | |||||||| |||||||||| ||||||||| |||| |||| |||||| ||| GACGATCCTA CAAGCACATT TACTTGCCCT GGTGGTAGTA CAAACTATAN GGTTGTCTTT 603 TGTCCTAATG GTGTTACTAG CCCAAATTTC CCCTTGGAGA TGCCCTCAAG TGATGAAGA 11384 |||||||||| ||||| || ||||||||| |||||||||| |||| |||| | ||| || TGTCCTAATG GTGTTGCTGA TCCAAATTTC CCCTTGGAGA TGCCTGCAAG TACTGATGA 662 hqPGS_C08HBa0235H18.1-_SGN-E213837+ (12042 11384) ******************************************************************************** EST sequence 652 +strand 654 n (File: SGN-E212616+) 1 ATCAATGCTC CGAGGGGAAC TAAGATGGCA CGTATATGGG GTCGTACTGG TTGCAACTTT 61 AATGCTGCAG GCAGAGGTAC ATGTCAGACT GGTGATTGTG GTGGAGTCTT ACAGTGTACC 121 GGATGGGGCA AACCCCCAAA CACCCTAGCC GAGTACGCCT TGGACCAGTT TAGCAACTTA 181 GATTTTTGGG ACATTTCTTT AGTCGATGGA TTTAATATTC CAATGACTTT TGCCCCAACA 241 AAACCTAGTG GAGGAAAATG TCACGCAATT CATTGCACGG CCAATATAAA TGGTGAATGT 301 CCTCGCGCCC TTAAGGTACC TGGAGGATGT AACAACCCTT GTACCACGTT TGGAGGACAA 361 CAATATTGTT GCACCCAAGG TCCATGTGGC CCTACAGAGT TGTCCAAATT TTTCAAGAAA 421 AGATGTCCCG ATGCTTATAG CTACCCACAA GACGATCCTA CAAGCACATT TACTTGCCCT 481 GGTGGTAGTA CAAACTATAG GGTTGTCTTT TGTCCTAATG GTGTTGCTGA TCCAATTTCC 541 CCTTGGAGAT GCCTGCAAGT ACTGATGAAG TGGCCAAGTG AATTTGAGTT TCTTCATTTT 601 AAATCGCCTC AATTAGTCAA CTGATCTCTA CCCGTAATGA AAATCTTAAT AGCT Predicted gene structure (within gDNA segment 13875 to 9779): Exon 1 11952 11384 ( 569 n); cDNA 1 568 ( 568 n); score: 0.896 MATCH C08HBa0235H18.1- SGN-E212616+ 0.896 569 0.870 C PGS_C08HBa0235H18.1-_SGN-E212616+ (11952 11384) Alignment (genomic DNA sequence = upper lines): ATCAATGCAC CGAGGGGCAC TAAGATGGCA CGTATATGGG GTCGTACGAA TTGCAACTTT 11893 |||||||| | ||||||| || |||||||||| |||||||||| ||||||| |||||||||| ATCAATGCTC CGAGGGGAAC TAAGATGGCA CGTATATGGG GTCGTACTGG TTGCAACTTT 60 GATGGTGCTG GTAGAGGTTC ATGTCAGACT GGTGATTGTG GTGGGGTCTT GCAATGTACC 11833 ||| ||| | | |||||| | |||||||||| |||||||||| |||| ||||| || |||||| AATGCTGCAG GCAGAGGTAC ATGTCAGACT GGTGATTGTG GTGGAGTCTT ACAGTGTACC 120 GGGTGGGGCA AACCACCAAA CACCCTGGCC GAGTACGCCT TGGACCAGTT TAGCAACCTA 11773 || ||||||| |||| ||||| |||||| ||| |||||||||| |||||||||| ||||||| || GGATGGGGCA AACCCCCAAA CACCCTAGCC GAGTACGCCT TGGACCAGTT TAGCAACTTA 180 GATTTCTGGG ACATTTCTTT AGTCGATGGA TTTAATATTC CAATGACTTT CGCCCCGACC 11713 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| || GATTTTTGGG ACATTTCTTT AGTCGATGGA TTTAATATTC CAATGACTTT TGCCCCAACA 240 AATCCTAGTG GAGGGAAATG CCATGCAATT CATTGTACGG CTAATATAAA TGGTGAATGT 11653 || ||||||| |||| ||||| || |||||| ||||| |||| | |||||||| |||||||||| AAACCTAGTG GAGGAAAATG TCACGCAATT CATTGCACGG CCAATATAAA TGGTGAATGT 300 CCTGGTTCAC TTAGGGTACC CGGAGGATGT AACAATCCTT GTACCACGTT CGGAGGACAA 11593 ||| | | | ||| |||||| ||||||||| ||||| |||| |||||||||| ||||||||| CCTCGCGCCC TTAAGGTACC TGGAGGATGT AACAACCCTT GTACCACGTT TGGAGGACAA 360 CAATATTGTT GCACACAAGG TCCATGTGGC CCTACTGATT TGTCGAGATT TTTCAAACAA 11533 |||||||||| |||| ||||| |||||||||| ||||| || | |||| | ||| |||||| || CAATATTGTT GCACCCAAGG TCCATGTGGC CCTACAGAGT TGTCCAAATT TTTCAAGAAA 420 AGATGTCCTG ATGCGTATAG CTACCCACAA GATGATCCTA CTAGCACATT TACTTGCCCT 11473 |||||||| | |||| ||||| |||||||||| || ||||||| | |||||||| |||||||||| AGATGTCCCG ATGCTTATAG CTACCCACAA GACGATCCTA CAAGCACATT TACTTGCCCT 480 AGTGGTAGTA CAAATTATAG GGTTGTTTTT TGTCCTAATG GTGTTACTAG CCCAAATTTC 11413 ||||||||| |||| ||||| |||||| ||| |||||||||| ||||| || | | |||||| GGTGGTAGTA CAAACTATAG GGTTGTCTTT TGTCCTAATG GTGTTGCT-G ATCCAATTTC 539 CCCTTGGAGA TGCCCTCAAG TGATGAAGA 11384 |||||||||| |||| |||| | ||| || CCCTTGGAGA TGCCTGCAAG TACTGATGA 568 hqPGS_C08HBa0235H18.1-_SGN-E212616+ (11952 11384) ******************************************************************************** EST sequence 545 +strand 567 n (File: SGN-E252885+) 1 CAGAGGTACA TGTCATACTG GTGATTGTGG TGGAGTCTTA CAGTGTACCG GATGGGGCAA 61 ACCCCCAAAC ACCCTAGCCG AGTACGCCTT GGACCAGTTT AGCAACTTAG ATTTTTGGGA 121 CATTTCTTTA GTCGATGGAT TTAATATTCC AATGACTTTT GCCCCAACAA AACCTAGTGG 181 AGGAAAATGT CACGCAATTC ATTGCACGGC CAATATAAAT GGTGAATGTC CTCGCGCCCT 241 TAAGGTACCT GGAGGATGTA ACAACCCTTG TACCACGTTT GGAGGACAAC AATATTGTTG 301 CACCCAAGGT CCATGTGGCC CTACAGAGTT GTCCAAATTT TTCAAGAAAA GATGTCCCGA 361 TGCTTATAGC TACCCACAAG ACGATCCTAC AAGCACATTT ACTTGCCCTG GTGGTAGTAC 421 AAACTATAGG GTTGTCTTTT GTCCTAATGG TGTTGCTGAT CCAAATTTCC CCTTGGAGAT 481 GCCTGCAAGT ACTGATGAAG TGGCCAAGTG AATTTGAGTT TCTTCATTTT AAATCGCCTC 541 AATTAGTCAA CTGATCTCTA CCGTAAT Predicted gene structure (within gDNA segment 13165 to 9949): Exon 1 11880 11384 ( 497 n); cDNA 2 498 ( 497 n); score: 0.899 MATCH C08HBa0235H18.1- SGN-E252885+ 0.899 497 0.877 C PGS_C08HBa0235H18.1-_SGN-E252885+ (11880 11384) Alignment (genomic DNA sequence = upper lines): AGAGGTTCAT GTCAGACTGG TGATTGTGGT GGGGTCTTGC AATGTACCGG GTGGGGCAAA 11821 |||||| ||| |||| ||||| |||||||||| || ||||| | | |||||||| ||||||||| AGAGGTACAT GTCATACTGG TGATTGTGGT GGAGTCTTAC AGTGTACCGG ATGGGGCAAA 61 CCACCAAACA CCCTGGCCGA GTACGCCTTG GACCAGTTTA GCAACCTAGA TTTCTGGGAC 11761 || ||||||| |||| ||||| |||||||||| |||||||||| ||||| |||| ||| |||||| CCCCCAAACA CCCTAGCCGA GTACGCCTTG GACCAGTTTA GCAACTTAGA TTTTTGGGAC 121 ATTTCTTTAG TCGATGGATT TAATATTCCA ATGACTTTCG CCCCGACCAA TCCTAGTGGA 11701 |||||||||| |||||||||| |||||||||| |||||||| | |||| || || ||||||||| ATTTCTTTAG TCGATGGATT TAATATTCCA ATGACTTTTG CCCCAACAAA ACCTAGTGGA 181 GGGAAATGCC ATGCAATTCA TTGTACGGCT AATATAAATG GTGAATGTCC TGGTTCACTT 11641 || ||||| | | |||||||| ||| ||||| |||||||||| |||||||||| | | | ||| GGAAAATGTC ACGCAATTCA TTGCACGGCC AATATAAATG GTGAATGTCC TCGCGCCCTT 241 AGGGTACCCG GAGGATGTAA CAATCCTTGT ACCACGTTCG GAGGACAACA ATATTGTTGC 11581 | |||||| | |||||||||| ||| |||||| |||||||| | |||||||||| |||||||||| AAGGTACCTG GAGGATGTAA CAACCCTTGT ACCACGTTTG GAGGACAACA ATATTGTTGC 301 ACACAAGGTC CATGTGGCCC TACTGATTTG TCGAGATTTT TCAAACAAAG ATGTCCTGAT 11521 || ||||||| |||||||||| ||| || ||| || | ||||| |||| |||| |||||| ||| ACCCAAGGTC CATGTGGCCC TACAGAGTTG TCCAAATTTT TCAAGAAAAG ATGTCCCGAT 361 GCGTATAGCT ACCCACAAGA TGATCCTACT AGCACATTTA CTTGCCCTAG TGGTAGTACA 11461 || ||||||| |||||||||| |||||||| |||||||||| |||||||| | |||||||||| GCTTATAGCT ACCCACAAGA CGATCCTACA AGCACATTTA CTTGCCCTGG TGGTAGTACA 421 AATTATAGGG TTGTTTTTTG TCCTAATGGT GTTACTAGCC CAAATTTCCC CTTGGAGATG 11401 || ||||||| |||| ||||| |||||||||| ||| || | |||||||||| |||||||||| AACTATAGGG TTGTCTTTTG TCCTAATGGT GTTGCTGATC CAAATTTCCC CTTGGAGATG 481 CCCTCAAGTG ATGAAGA 11384 || ||||| ||| || CCTGCAAGTA CTGATGA 498 hqPGS_C08HBa0235H18.1-_SGN-E252885+ (11880 11384) ******************************************************************************** EST sequence 1094 +strand 533 n (File: SGN-E209133+) 1 GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC CGAGTACGCC 61 TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG ATTTAATATT 121 CCATGACTTT TGCCCCAACA AAACCTAGTG GAGGAAAATG TCACGCAATT CATTGCACGG 181 CCAATATAAA TGGTGAATGT CCTCGCGCCC TTAAGGTACC TGGAGGATGT AACAACCCTT 241 GTACCACGTT TGGAGGACAA CAATATTGTT GCACCCAAGG TCCATGTGGC CCTACAGAGT 301 TGTCCAAATT TTTCAAGAAA AGATGTCCCG ATGCTTATAG CTACCCACAA GACGATCCTA 361 CAAGCACATT TACTTGCCCT GGTGGTAGTA CAAACTATAG GGTTGTCTTT TGTCCTAATG 421 GTGTTGCTGA TCCAAATTTC CCCTTGGAGA TGCCTGCAAG TACTGATGAA GTGGCCAAGT 481 GAATTTGAGT TTCTTCATTT TAAATCGCCT CAATTAGTCA ACTGATCTCT ACC Predicted gene structure (within gDNA segment 12885 to 9999): Exon 1 11853 11384 ( 470 n); cDNA 1 469 ( 469 n); score: 0.896 MATCH C08HBa0235H18.1- SGN-E209133+ 0.896 470 0.882 C PGS_C08HBa0235H18.1-_SGN-E209133+ (11853 11384) Alignment (genomic DNA sequence = upper lines): GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA ACACCCTGGC CGAGTACGCC 11794 ||||| |||| | || ||||| ||| |||||| ||||| |||| ||||||| || |||||||||| GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC CGAGTACGCC 60 TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG ATTTAATATT 11734 |||||||||| |||||||| | |||||| ||| |||||||||| |||||||||| |||||||||| TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG ATTTAATATT 120 CCAATGACTT TCGCCCCGAC CAATCCTAGT GGAGGGAAAT GCCATGCAAT TCATTGTACG 11674 || ||||||| | ||||| || || |||||| ||||| |||| | || ||||| |||||| ||| CC-ATGACTT TTGCCCCAAC AAAACCTAGT GGAGGAAAAT GTCACGCAAT TCATTGCACG 179 GCTAATATAA ATGGTGAATG TCCTGGTTCA CTTAGGGTAC CCGGAGGATG TAACAATCCT 11614 || ||||||| |||||||||| |||| | | |||| ||||| | |||||||| |||||| ||| GCCAATATAA ATGGTGAATG TCCTCGCGCC CTTAAGGTAC CTGGAGGATG TAACAACCCT 239 TGTACCACGT TCGGAGGACA ACAATATTGT TGCACACAAG GTCCATGTGG CCCTACTGAT 11554 |||||||||| | |||||||| |||||||||| ||||| |||| |||||||||| |||||| || TGTACCACGT TTGGAGGACA ACAATATTGT TGCACCCAAG GTCCATGTGG CCCTACAGAG 299 TTGTCGAGAT TTTTCAAACA AAGATGTCCT GATGCGTATA GCTACCCACA AGATGATCCT 11494 ||||| | || ||||||| | ||||||||| ||||| |||| |||||||||| ||| |||||| TTGTCCAAAT TTTTCAAGAA AAGATGTCCC GATGCTTATA GCTACCCACA AGACGATCCT 359 ACTAGCACAT TTACTTGCCC TAGTGGTAGT ACAAATTATA GGGTTGTTTT TTGTCCTAAT 11434 || ||||||| |||||||||| | |||||||| ||||| |||| ||||||| || |||||||||| ACAAGCACAT TTACTTGCCC TGGTGGTAGT ACAAACTATA GGGTTGTCTT TTGTCCTAAT 419 GGTGTTACTA GCCCAAATTT CCCCTTGGAG ATGCCCTCAA GTGATGAAGA 11384 |||||| || |||||||| |||||||||| ||||| ||| || ||| || GGTGTTGCTG ATCCAAATTT CCCCTTGGAG ATGCCTGCAA GTACTGATGA 469 hqPGS_C08HBa0235H18.1-_SGN-E209133+ (11853 11384) ******************************************************************************** EST sequence 513 +strand 503 n (File: SGN-E350782+) 1 AGCAACTTAG ATTTTTGGGA CATTTCTTTA GTCGATGGAT TTAATATTCC AATGACTTTT 61 GCCCCAACAA AACCTAGTGG AGGAAAATGT CACGCAATTC ATTGCACGGC CAATATAAAT 121 GGTGAATGTC CTCGCGCCCT TAAGGTACCT GGAGGATGTA ACAACCCTTG TACCACGTTT 181 GGAGGACAAC AATATTGTTG CACCCAAGGT CCATGTGGCC CTACAGAGTT GTCCAAATTT 241 TTCAAGAAAA GATGTCCCGA TGCTTATAGC TACCCACAAG ACGATCCTAC AAGCACATTT 301 ACTTGCCCTG GTGGTAGTAC AAACTATAGG GTTGTCTTTT GTCCTAATGG TGTTGCTGAT 361 CCAAATTTCC CCTTGGAGAT GCCTGCAAGT ACTGATGAAG TGGCCAAGTG AATTTGAGTT 421 TCTTCATTTT AAATCGCCTC AATTAGTCAA CTGATCTCTA CCGTAATGAA AAATCTTAAT 481 AGCTCAAAAA AAAAAAAAAA AAA Predicted gene structure (within gDNA segment 12516 to 9589): Exon 1 11781 11384 ( 398 n); cDNA 1 398 ( 398 n); score: 0.894 PPA cDNA 486 503 MATCH C08HBa0235H18.1- SGN-E350782+ 0.894 398 0.791 C PGS_C08HBa0235H18.1-_SGN-E350782+ (11781 11384) Alignment (genomic DNA sequence = upper lines): AGCAACCTAG ATTTCTGGGA CATTTCTTTA GTCGATGGAT TTAATATTCC AATGACTTTC 11722 |||||| ||| |||| ||||| |||||||||| |||||||||| |||||||||| ||||||||| AGCAACTTAG ATTTTTGGGA CATTTCTTTA GTCGATGGAT TTAATATTCC AATGACTTTT 60 GCCCCGACCA ATCCTAGTGG AGGGAAATGC CATGCAATTC ATTGTACGGC TAATATAAAT 11662 ||||| || | | |||||||| ||| ||||| || ||||||| |||| ||||| ||||||||| GCCCCAACAA AACCTAGTGG AGGAAAATGT CACGCAATTC ATTGCACGGC CAATATAAAT 120 GGTGAATGTC CTGGTTCACT TAGGGTACCC GGAGGATGTA ACAATCCTTG TACCACGTTC 11602 |||||||||| || | | || || |||||| |||||||||| |||| ||||| ||||||||| GGTGAATGTC CTCGCGCCCT TAAGGTACCT GGAGGATGTA ACAACCCTTG TACCACGTTT 180 GGAGGACAAC AATATTGTTG CACACAAGGT CCATGTGGCC CTACTGATTT GTCGAGATTT 11542 |||||||||| |||||||||| ||| |||||| |||||||||| |||| || || ||| | |||| GGAGGACAAC AATATTGTTG CACCCAAGGT CCATGTGGCC CTACAGAGTT GTCCAAATTT 240 TTCAAACAAA GATGTCCTGA TGCGTATAGC TACCCACAAG ATGATCCTAC TAGCACATTT 11482 ||||| ||| ||||||| || ||| |||||| |||||||||| | |||||||| ||||||||| TTCAAGAAAA GATGTCCCGA TGCTTATAGC TACCCACAAG ACGATCCTAC AAGCACATTT 300 ACTTGCCCTA GTGGTAGTAC AAATTATAGG GTTGTTTTTT GTCCTAATGG TGTTACTAGC 11422 ||||||||| |||||||||| ||| |||||| ||||| |||| |||||||||| |||| || ACTTGCCCTG GTGGTAGTAC AAACTATAGG GTTGTCTTTT GTCCTAATGG TGTTGCTGAT 360 CCAAATTTCC CCTTGGAGAT GCCCTCAAGT GATGAAGA 11384 |||||||||| |||||||||| ||| ||||| ||| || CCAAATTTCC CCTTGGAGAT GCCTGCAAGT ACTGATGA 398 hqPGS_C08HBa0235H18.1-_SGN-E350782+ (11781 11384) ******************************************************************************** EST sequence 1175 +strand 346 n (File: SGN-E260107+) 1 TGACTTTTGC CCCAACAAAA CCTAGTGGAG GAAAATGTCA CGCAATTCAT TGCACGGCCA 61 ATATAAATGG TGAATGTCCT CGCGCCCTTA AGGTACCTGG AGGATGTAAC AACCCTTGTA 121 CCACGTTTGG AGGACAACAA TATTGTTGCA CCCAAGGTCC ATGTGGCCCT ACAGAGTTGT 181 CCAAATTTTT CAAGAAAAGA TGTCCCGATG CTTATAGCTA CCCACAAGAC GATCCTACAA 241 GCACATTTAC TTGCCCTGGT GGTAGTACAA ACTATAAGGT TGGCTTTTGT CCTAATGGTG 301 TTGCTGATCC AAATTTCCCC TTGGAGATGC CTGCCAGTAC TGATGA Predicted gene structure (within gDNA segment 13481 to 10639): Exon 1 11729 11384 ( 346 n); cDNA 1 346 ( 346 n); score: 0.876 MATCH C08HBa0235H18.1- SGN-E260107+ 0.876 346 1.000 C PGS_C08HBa0235H18.1-_SGN-E260107+ (11729 11384) Alignment (genomic DNA sequence = upper lines): TGACTTTCGC CCCGACCAAT CCTAGTGGAG GGAAATGCCA TGCAATTCAT TGTACGGCTA 11670 ||||||| || ||| || || |||||||||| | ||||| || ||||||||| || ||||| | TGACTTTTGC CCCAACAAAA CCTAGTGGAG GAAAATGTCA CGCAATTCAT TGCACGGCCA 60 ATATAAATGG TGAATGTCCT GGTTCACTTA GGGTACCCGG AGGATGTAAC AATCCTTGTA 11610 |||||||||| |||||||||| | | |||| |||||| || |||||||||| || ||||||| ATATAAATGG TGAATGTCCT CGCGCCCTTA AGGTACCTGG AGGATGTAAC AACCCTTGTA 120 CCACGTTCGG AGGACAACAA TATTGTTGCA CACAAGGTCC ATGTGGCCCT ACTGATTTGT 11550 ||||||| || |||||||||| |||||||||| | |||||||| |||||||||| || || |||| CCACGTTTGG AGGACAACAA TATTGTTGCA CCCAAGGTCC ATGTGGCCCT ACAGAGTTGT 180 CGAGATTTTT CAAACAAAGA TGTCCTGATG CGTATAGCTA CCCACAAGAT GATCCTACTA 11490 | | |||||| ||| ||||| ||||| |||| | |||||||| ||||||||| |||||||| | CCAAATTTTT CAAGAAAAGA TGTCCCGATG CTTATAGCTA CCCACAAGAC GATCCTACAA 240 GCACATTTAC TTGCCCTAGT GGTAGTACAA ATTATAGGGT TGTTTTTTGT CCTAATGGTG 11430 |||||||||| ||||||| || |||||||||| | |||| ||| || |||||| |||||||||| GCACATTTAC TTGCCCTGGT GGTAGTACAA ACTATAAGGT TGGCTTTTGT CCTAATGGTG 300 TTACTAGCCC AAATTTCCCC TTGGAGATGC CCTCAAGTGA TGAAGA 11384 || || || |||||||||| |||||||||| | | ||| ||| || TTGCTGATCC AAATTTCCCC TTGGAGATGC CTGCCAGTAC TGATGA 346 hqPGS_C08HBa0235H18.1-_SGN-E260107+ (11729 11384) ******************************************************************************** EST sequence 519 +strand 719 n (File: SGN-E210966+) 1 TGACATCTTC TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 61 TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 121 GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 181 CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 241 CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 301 CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG 361 GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 421 TTCATTGCAC GGCCAATATA AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT 481 GTAACAACCC TTGTACCACG TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG 541 GCCCTACAGA GTTGTCCAAA TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC 601 AAGACGATCC TACAAGCACA TTTACTTGCC CTGGTGGTAG TACAAACTAT AGGGTTGTCT 661 TTTGTCCTAA TGGTNGTGCT GATCCAAATT TCCCTTGGAG ATGCCCTGCA GTACTGATG Predicted gene structure (within gDNA segment 13694 to 9993): Exon 1 12104 11387 ( 718 n); cDNA 1 717 ( 717 n); score: 0.894 MATCH C08HBa0235H18.1- SGN-E210966+ 0.894 718 0.999 C PGS_C08HBa0235H18.1-_SGN-E210966+ (12104 11387) Alignment (genomic DNA sequence = upper lines): TGAGATCTTC TTTTGTTTTC TTCCTTCTTG CTTTTGTGAC TTACACTTAT GCTGCCACTT 12045 ||| |||||| ||||||| || ||| | ||| || |||||| ||| |||||| ||||||||| TGACATCTTC TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 60 TCGAGGTACG CAACAACTGT CCATACACCG TCTGGGCGGC GTCGACCCCA ATAGGCGGTG 11985 | |||||||| |||||||||| |||||||||| | |||||||| ||||| || |||||||||| TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 120 GTCGACGTCT TGATCGAGGC CAAACATGGG TCATCAATGC ACCGAGGGGC ACTAAGATGG 11925 |||||||||| |||||||| |||||||||| |||||||||| |||||||| |||||||||| GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 180 CACGTATATG GGGTCGTACG AATTGCAACT TTGATGGTGC TGGTAGAGGT TCATGTCAGA 11865 |||||||||| ||||||||| |||||||| || ||| ||| || |||||| ||||||||| CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 240 CTGGTGATTG TGGTGGGGTC TTGCAATGTA CCGGGTGGGG CAAACCACCA AACACCCTGG 11805 |||||||||| |||||| ||| || || |||| |||| ||||| |||||| ||| |||||||| | CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 300 CCGAGTACGC CTTGGACCAG TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG 11745 |||||||||| |||||||||| ||||||||| ||||||| || |||||||||| |||||||||| CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG 360 GATTTAATAT TCCAATGACT TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA 11685 |||||||||| |||||||||| || ||||| | | || ||||| |||||| ||| || || |||| GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 420 TTCATTGTAC GGCTAATATA AATGGTGAAT GTCCTGGTTC ACTTAGGGTA CCCGGAGGAT 11625 ||||||| || ||| |||||| |||||||||| ||||| | | |||| |||| || ||||||| TTCATTGCAC GGCCAATATA AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT 480 GTAACAATCC TTGTACCACG TTCGGAGGAC AACAATATTG TTGCACACAA GGTCCATGTG 11565 ||||||| || |||||||||| || ||||||| |||||||||| |||||| ||| |||||||||| GTAACAACCC TTGTACCACG TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG 540 GCCCTACTGA TTTGTCGAGA TTTTTCAAAC AAAGATGTCC TGATGCGTAT AGCTACCCAC 11505 ||||||| || ||||| | | |||||||| |||||||||| ||||| ||| |||||||||| GCCCTACAGA GTTGTCCAAA TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC 600 AAGATGATCC TACTAGCACA TTTACTTGCC CTAGTGGTAG TACAAATTAT AGGGTTGTTT 11445 |||| ||||| ||| |||||| |||||||||| || ||||||| |||||| ||| |||||||| | AAGACGATCC TACAAGCACA TTTACTTGCC CTGGTGGTAG TACAAACTAT AGGGTTGTCT 660 TTTGTCCTAA TGGTGTTACT AGCCCAAATT TCCCCTTGGA GATGCCCTCA AGTGATGA 11387 |||||||||| |||| | || ||||||| | |||||||| |||||||| ||| ||| TTTGTCCTAA TGGTNGTGCT GATCCAAATT T-CCCTTGGA GATGCCCTGC AGTACTGA 717 hqPGS_C08HBa0235H18.1-_SGN-E210966+ (12104 11387) ******************************************************************************** EST sequence 1131 +strand 645 n (File: SGN-E258673+) 1 AACTGTCCAT ACACCGTTTG GGCGGCATCG ACTCCGATAG GCGGTGGTCG ACGTCTCAAT 61 CGAGGCCAAA CATGGGTCAT CAATGCTCCG AGGGGAACTA AGATGGCACG TATATGGGGT 121 CGTACTGGTT GCAACTTTAA TGCTGCAGGC AGAGGTACAT GTCAGACTGG TGATTGTGGT 181 GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAACA CCCTAGCCGA GTACGCCTTG 241 GACCAGTTTA GCAACTTAGA TTTTTGGGAC ATTTCTTTAG TCGATGGATT TAATATTCCA 301 ATGACTTTTG CCCCAACAAA ACCTAGTGGA GGAAAATGTC ACGCAATTCA TTGCACGGCC 361 AATATAAATG GTGAATGTCC TCGCGCCCTT AAGGTACCTG GAGGATGTAA CAACCCTTGT 421 ACCACGTTTG GAGGACAACA ATATTGTTGC ACCCAAGGTC CATGTGGCCC TACAGAGTTG 481 TCCAAATTTT TCAAGAAAAG ATGTCCCGAT GCTTATAGCT ACCCACAAGA CGATCCTACA 541 AGCACATTTA CTTGCCCTGG TGGTAGTACA AACTATAGGG TTGTTTTTTG TCCTAATGGT 601 GTTGCTGATC CAAATTTCCC CTTGGAGATG CCTGCAAGTA CTGAT Predicted gene structure (within gDNA segment 12954 to 10659): Exon 1 12030 11387 ( 644 n); cDNA 1 644 ( 644 n); score: 0.904 MATCH C08HBa0235H18.1- SGN-E258673+ 0.904 644 0.998 C PGS_C08HBa0235H18.1-_SGN-E258673+ (12030 11387) Alignment (genomic DNA sequence = upper lines): AACTGTCCAT ACACCGTCTG GGCGGCGTCG ACCCCAATAG GCGGTGGTCG ACGTCTTGAT 11971 |||||||||| ||||||| || |||||| ||| || || |||| |||||||||| |||||| || AACTGTCCAT ACACCGTTTG GGCGGCATCG ACTCCGATAG GCGGTGGTCG ACGTCTCAAT 60 CGAGGCCAAA CATGGGTCAT CAATGCACCG AGGGGCACTA AGATGGCACG TATATGGGGT 11911 |||||||||| |||||||||| |||||| ||| ||||| |||| |||||||||| |||||||||| CGAGGCCAAA CATGGGTCAT CAATGCTCCG AGGGGAACTA AGATGGCACG TATATGGGGT 120 CGTACGAATT GCAACTTTGA TGGTGCTGGT AGAGGTTCAT GTCAGACTGG TGATTGTGGT 11851 ||||| || |||||||| | || ||| || |||||| ||| |||||||||| |||||||||| CGTACTGGTT GCAACTTTAA TGCTGCAGGC AGAGGTACAT GTCAGACTGG TGATTGTGGT 180 GGGGTCTTGC AATGTACCGG GTGGGGCAAA CCACCAAACA CCCTGGCCGA GTACGCCTTG 11791 || ||||| | | |||||||| ||||||||| || ||||||| |||| ||||| |||||||||| GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAACA CCCTAGCCGA GTACGCCTTG 240 GACCAGTTTA GCAACCTAGA TTTCTGGGAC ATTTCTTTAG TCGATGGATT TAATATTCCA 11731 |||||||||| ||||| |||| ||| |||||| |||||||||| |||||||||| |||||||||| GACCAGTTTA GCAACTTAGA TTTTTGGGAC ATTTCTTTAG TCGATGGATT TAATATTCCA 300 ATGACTTTCG CCCCGACCAA TCCTAGTGGA GGGAAATGCC ATGCAATTCA TTGTACGGCT 11671 |||||||| | |||| || || ||||||||| || ||||| | | |||||||| ||| ||||| ATGACTTTTG CCCCAACAAA ACCTAGTGGA GGAAAATGTC ACGCAATTCA TTGCACGGCC 360 AATATAAATG GTGAATGTCC TGGTTCACTT AGGGTACCCG GAGGATGTAA CAATCCTTGT 11611 |||||||||| |||||||||| | | | ||| | |||||| | |||||||||| ||| |||||| AATATAAATG GTGAATGTCC TCGCGCCCTT AAGGTACCTG GAGGATGTAA CAACCCTTGT 420 ACCACGTTCG GAGGACAACA ATATTGTTGC ACACAAGGTC CATGTGGCCC TACTGATTTG 11551 |||||||| | |||||||||| |||||||||| || ||||||| |||||||||| ||| || ||| ACCACGTTTG GAGGACAACA ATATTGTTGC ACCCAAGGTC CATGTGGCCC TACAGAGTTG 480 TCGAGATTTT TCAAACAAAG ATGTCCTGAT GCGTATAGCT ACCCACAAGA TGATCCTACT 11491 || | ||||| |||| |||| |||||| ||| || ||||||| |||||||||| |||||||| TCCAAATTTT TCAAGAAAAG ATGTCCCGAT GCTTATAGCT ACCCACAAGA CGATCCTACA 540 AGCACATTTA CTTGCCCTAG TGGTAGTACA AATTATAGGG TTGTTTTTTG TCCTAATGGT 11431 |||||||||| |||||||| | |||||||||| || ||||||| |||||||||| |||||||||| AGCACATTTA CTTGCCCTGG TGGTAGTACA AACTATAGGG TTGTTTTTTG TCCTAATGGT 600 GTTACTAGCC CAAATTTCCC CTTGGAGATG CCCTCAAGTG ATGA 11387 ||| || | |||||||||| |||||||||| || ||||| ||| GTTGCTGATC CAAATTTCCC CTTGGAGATG CCTGCAAGTA CTGA 644 hqPGS_C08HBa0235H18.1-_SGN-E258673+ (12030 11387) ******************************************************************************** EST sequence 469 +strand 577 n (File: SGN-E211610+) 1 CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG CACGTATATG GGGTCGTACT 61 GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA CTGGTGATTG TGGTGGAGTC 121 TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG CCGAGTACGC CTTGGACCAG 181 TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG GATTTAATAT TCCAATGACT 241 TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA TTCATTGCAC GGCCAATATA 301 AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT GTAACAACCC TTGTACCACG 361 TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG GCCCTACAGA GTTGTCCAAA 421 TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC AAGACGATCC TACAAGCACA 481 TTTACTTGCC CTGGTGGTAG TACAAACTAT AAGGTTGTCT TTTGTCCTAA TGGTGTTGCT 541 GATCCAAATT TCCCCTTGGA GATGCCTGCA AGTACTG Predicted gene structure (within gDNA segment 12564 to 10679): Exon 1 11964 11388 ( 577 n); cDNA 1 577 ( 577 n); score: 0.899 MATCH C08HBa0235H18.1- SGN-E211610+ 0.899 577 1.000 C PGS_C08HBa0235H18.1-_SGN-E211610+ (11964 11388) Alignment (genomic DNA sequence = upper lines): CAAACATGGG TCATCAATGC ACCGAGGGGC ACTAAGATGG CACGTATATG GGGTCGTACG 11905 |||||||||| |||||||||| |||||||| |||||||||| |||||||||| ||||||||| CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG CACGTATATG GGGTCGTACT 60 AATTGCAACT TTGATGGTGC TGGTAGAGGT TCATGTCAGA CTGGTGATTG TGGTGGGGTC 11845 |||||||| || ||| ||| || |||||| ||||||||| |||||||||| |||||| ||| GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA CTGGTGATTG TGGTGGAGTC 120 TTGCAATGTA CCGGGTGGGG CAAACCACCA AACACCCTGG CCGAGTACGC CTTGGACCAG 11785 || || |||| |||| ||||| |||||| ||| |||||||| | |||||||||| |||||||||| TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG CCGAGTACGC CTTGGACCAG 180 TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG GATTTAATAT TCCAATGACT 11725 ||||||||| ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG GATTTAATAT TCCAATGACT 240 TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA TTCATTGTAC GGCTAATATA 11665 || ||||| | | || ||||| |||||| ||| || || |||| ||||||| || ||| |||||| TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA TTCATTGCAC GGCCAATATA 300 AATGGTGAAT GTCCTGGTTC ACTTAGGGTA CCCGGAGGAT GTAACAATCC TTGTACCACG 11605 |||||||||| ||||| | | |||| |||| || ||||||| ||||||| || |||||||||| AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT GTAACAACCC TTGTACCACG 360 TTCGGAGGAC AACAATATTG TTGCACACAA GGTCCATGTG GCCCTACTGA TTTGTCGAGA 11545 || ||||||| |||||||||| |||||| ||| |||||||||| ||||||| || ||||| | | TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG GCCCTACAGA GTTGTCCAAA 420 TTTTTCAAAC AAAGATGTCC TGATGCGTAT AGCTACCCAC AAGATGATCC TACTAGCACA 11485 |||||||| |||||||||| ||||| ||| |||||||||| |||| ||||| ||| |||||| TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC AAGACGATCC TACAAGCACA 480 TTTACTTGCC CTAGTGGTAG TACAAATTAT AGGGTTGTTT TTTGTCCTAA TGGTGTTACT 11425 |||||||||| || ||||||| |||||| ||| | |||||| | |||||||||| ||||||| || TTTACTTGCC CTGGTGGTAG TACAAACTAT AAGGTTGTCT TTTGTCCTAA TGGTGTTGCT 540 AGCCCAAATT TCCCCTTGGA GATGCCCTCA AGTGATG 11388 ||||||| |||||||||| |||||| || ||| || GATCCAAATT TCCCCTTGGA GATGCCTGCA AGTACTG 577 hqPGS_C08HBa0235H18.1-_SGN-E211610+ (11964 11388) ******************************************************************************** EST sequence 701 +strand 703 n (File: SGN-E213606+) 1 TGACATCTTC TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 61 TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 121 GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 181 CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 241 CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 301 CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG 361 GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 421 TTCATTGCAC GGCCAATATA AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT 481 GTAACAACCC TTGTACCACG TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG 541 GCCCTACAGA GTTGTCCAAA TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC 601 AAGACGATCC TACAAGCACA TTTACTTGCC CTGGTGGTAG TACAAACTAT AGGGTTGTCT 661 TTTGTCCTAA TGGTGTTGCT GATCCAAATT TCCCCTTGGA AAT Predicted gene structure (within gDNA segment 13694 to 10765): Exon 1 12104 11402 ( 703 n); cDNA 1 703 ( 703 n); score: 0.900 MATCH C08HBa0235H18.1- SGN-E213606+ 0.900 703 1.000 C PGS_C08HBa0235H18.1-_SGN-E213606+ (12104 11402) Alignment (genomic DNA sequence = upper lines): TGAGATCTTC TTTTGTTTTC TTCCTTCTTG CTTTTGTGAC TTACACTTAT GCTGCCACTT 12045 ||| |||||| ||||||| || ||| | ||| || |||||| ||| |||||| ||||||||| TGACATCTTC TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 60 TCGAGGTACG CAACAACTGT CCATACACCG TCTGGGCGGC GTCGACCCCA ATAGGCGGTG 11985 | |||||||| |||||||||| |||||||||| | |||||||| ||||| || |||||||||| TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 120 GTCGACGTCT TGATCGAGGC CAAACATGGG TCATCAATGC ACCGAGGGGC ACTAAGATGG 11925 |||||||||| |||||||| |||||||||| |||||||||| |||||||| |||||||||| GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 180 CACGTATATG GGGTCGTACG AATTGCAACT TTGATGGTGC TGGTAGAGGT TCATGTCAGA 11865 |||||||||| ||||||||| |||||||| || ||| ||| || |||||| ||||||||| CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 240 CTGGTGATTG TGGTGGGGTC TTGCAATGTA CCGGGTGGGG CAAACCACCA AACACCCTGG 11805 |||||||||| |||||| ||| || || |||| |||| ||||| |||||| ||| |||||||| | CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 300 CCGAGTACGC CTTGGACCAG TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG 11745 |||||||||| |||||||||| ||||||||| ||||||| || |||||||||| |||||||||| CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG 360 GATTTAATAT TCCAATGACT TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA 11685 |||||||||| |||||||||| || ||||| | | || ||||| |||||| ||| || || |||| GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 420 TTCATTGTAC GGCTAATATA AATGGTGAAT GTCCTGGTTC ACTTAGGGTA CCCGGAGGAT 11625 ||||||| || ||| |||||| |||||||||| ||||| | | |||| |||| || ||||||| TTCATTGCAC GGCCAATATA AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT 480 GTAACAATCC TTGTACCACG TTCGGAGGAC AACAATATTG TTGCACACAA GGTCCATGTG 11565 ||||||| || |||||||||| || ||||||| |||||||||| |||||| ||| |||||||||| GTAACAACCC TTGTACCACG TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG 540 GCCCTACTGA TTTGTCGAGA TTTTTCAAAC AAAGATGTCC TGATGCGTAT AGCTACCCAC 11505 ||||||| || ||||| | | |||||||| |||||||||| ||||| ||| |||||||||| GCCCTACAGA GTTGTCCAAA TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC 600 AAGATGATCC TACTAGCACA TTTACTTGCC CTAGTGGTAG TACAAATTAT AGGGTTGTTT 11445 |||| ||||| ||| |||||| |||||||||| || ||||||| |||||| ||| |||||||| | AAGACGATCC TACAAGCACA TTTACTTGCC CTGGTGGTAG TACAAACTAT AGGGTTGTCT 660 TTTGTCCTAA TGGTGTTACT AGCCCAAATT TCCCCTTGGA GAT 11402 |||||||||| ||||||| || ||||||| |||||||||| || TTTGTCCTAA TGGTGTTGCT GATCCAAATT TCCCCTTGGA AAT 703 hqPGS_C08HBa0235H18.1-_SGN-E213606+ (12104 11402) ******************************************************************************** EST sequence 570 +strand 652 n (File: SGN-E213536+) 1 TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 61 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 121 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 181 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 241 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 301 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 361 AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 421 GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC 481 CCAAGGTCCA TGTGGCCCTA CAGAGTTGTC CAAATTTTTC AAGAAAAGAT GTCCCGATGC 541 TTATAGCTAC CCACAAGACG ATCCTACAAG CACATTTACT TGCCCTGGTG GTAGTACAAA 601 CTATANGGTT GTCTTTTGTC CTAATGGTGT TGCTGATCCA AATTTCCCTT GG Predicted gene structure (within gDNA segment 13234 to 10203): Exon 1 12058 11406 ( 653 n); cDNA 1 652 ( 652 n); score: 0.904 MATCH C08HBa0235H18.1- SGN-E213536+ 0.904 653 1.002 C PGS_C08HBa0235H18.1-_SGN-E213536+ (12058 11406) Alignment (genomic DNA sequence = upper lines): TTATGCTGCC ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG CGGCGTCGAC 11999 |||||||||| ||| | |||| |||||||||| |||||||||| ||||| |||| |||| ||||| TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 60 CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG 11939 || |||||| |||||||||| |||| |||| |||||||||| |||||||||| |||| ||||| TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 120 GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG 11879 ||| |||||| |||||||||| |||||||||| ||| |||| |||||| ||| ||| || || GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 180 AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC 11819 |||| ||||| |||||||||| |||||||||| ||||| || |||||||| | |||||||||| AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 240 ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT 11759 ||||||||| || ||||||| |||||||||| |||||||||| ||| |||||| | |||||||| CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 300 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG 11699 |||||||||| |||||||||| |||||||||| |||||| ||| || || || | |||||||||| TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 360 GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG 11639 ||||| || |||||||||| | ||||| || |||||||||| ||||||||| | | |||| AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 420 GGTACCCGGA GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT ATTGTTGCAC 11579 |||||| ||| |||||||||| | |||||||| |||||| ||| |||||||||| |||||||||| GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC 480 ACAAGGTCCA TGTGGCCCTA CTGATTTGTC GAGATTTTTC AAACAAAGAT GTCCTGATGC 11519 ||||||||| |||||||||| | || ||||| | ||||||| || |||||| |||| ||||| CCAAGGTCCA TGTGGCCCTA CAGAGTTGTC CAAATTTTTC AAGAAAAGAT GTCCCGATGC 540 GTATAGCTAC CCACAAGATG ATCCTACTAG CACATTTACT TGCCCTAGTG GTAGTACAAA 11459 ||||||||| |||||||| | ||||||| || |||||||||| |||||| ||| |||||||||| TTATAGCTAC CCACAAGACG ATCCTACAAG CACATTTACT TGCCCTGGTG GTAGTACAAA 600 TTATAGGGTT GTTTTTTGTC CTAATGGTGT TACTAGCCCA AATTTCCCCT TGG 11406 |||| |||| || ||||||| |||||||||| | || ||| ||||| |||| ||| CTATANGGTT GTCTTTTGTC CTAATGGTGT TGCTGATCCA AATTT-CCCT TGG 652 hqPGS_C08HBa0235H18.1-_SGN-E213536+ (12058 11406) ******************************************************************************** EST sequence 713 +strand 643 n (File: SGN-E213897+) 1 CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA CTCCGATAGG 61 CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA GGGGAACTAA 121 GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA GAGGTACATG 181 TCAGACTGGT GATTGTGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC CCCCAAACAC 241 CCTAGCCGAG TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA TTTCTTTAGT 301 CGATGGATTT AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG GAAAATGTCA 361 CGCAATTCAT TGCACGGCCA ATATAAATGG TGAATGTCCT CGCGCCCTTA AGGTACCTGG 421 AGGATGTAAC AACCCTTGTA CCACGTTTGG AGGACAACAA TATTGTTGCA CCCAAGGTCC 481 ATGTGGCCCT ACAGAGTTGT CCAAATTTTT CAAGAAAAGA TGTCCCGATG CTTATAGCTA 541 CCCACAAGAC GATCCTACAA GCACATTTAC TTGCCCCTGG TGGTAGTACA AACTATANGG 601 NTGTCTTTTG TCCTAATGGT GTTGCTGATT CAAATTTCCC CTT Predicted gene structure (within gDNA segment 13144 to 10194): Exon 1 12049 11408 ( 642 n); cDNA 1 643 ( 643 n); score: 0.896 MATCH C08HBa0235H18.1- SGN-E213897+ 0.896 642 0.998 C PGS_C08HBa0235H18.1-_SGN-E213897+ (12049 11408) Alignment (genomic DNA sequence = upper lines): CACTTTCGAG GTACGCAACA ACTGTCCATA CACCGTCTGG GCGGCGTCGA CCCCAATAGG 11990 |||| | ||| |||||||||| |||||||||| |||||| ||| ||||| |||| | || ||||| CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA CTCCGATAGG 60 CGGTGGTCGA CGTCTTGATC GAGGCCAAAC ATGGGTCATC AATGCACCGA GGGGCACTAA 11930 |||||||||| ||||| ||| |||||||||| |||||||||| ||||| |||| |||| ||||| CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA GGGGAACTAA 120 GATGGCACGT ATATGGGGTC GTACGAATTG CAACTTTGAT GGTGCTGGTA GAGGTTCATG 11870 |||||||||| |||||||||| |||| ||| ||||||| || | ||| || | ||||| |||| GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA GAGGTACATG 180 TCAGACTGGT GATTGTGGTG GGGTCTTGCA ATGTACCGGG TGGGGCAAAC CACCAAACAC 11810 |||||||||| |||||||||| | ||||| || |||||||| |||||||||| | |||||||| TCAGACTGGT GATTGTGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC CCCCAAACAC 240 CCTGGCCGAG TACGCCTTGG ACCAGTTTAG CAACCTAGAT TTCTGGGACA TTTCTTTAGT 11750 ||| |||||| |||||||||| |||||||||| |||| ||||| || ||||||| |||||||||| CCTAGCCGAG TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA TTTCTTTAGT 300 CGATGGATTT AATATTCCAA TGACTTTCGC CCCGACCAAT CCTAGTGGAG GGAAATGCCA 11690 |||||||||| |||||||||| ||||||| || ||| || || |||||||||| | ||||| || CGATGGATTT AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG GAAAATGTCA 360 TGCAATTCAT TGTACGGCTA ATATAAATGG TGAATGTCCT GGTTCACTTA GGGTACCCGG 11630 ||||||||| || ||||| | |||||||||| |||||||||| | | |||| |||||| || CGCAATTCAT TGCACGGCCA ATATAAATGG TGAATGTCCT CGCGCCCTTA AGGTACCTGG 420 AGGATGTAAC AATCCTTGTA CCACGTTCGG AGGACAACAA TATTGTTGCA CACAAGGTCC 11570 |||||||||| || ||||||| ||||||| || |||||||||| |||||||||| | |||||||| AGGATGTAAC AACCCTTGTA CCACGTTTGG AGGACAACAA TATTGTTGCA CCCAAGGTCC 480 ATGTGGCCCT ACTGATTTGT CGAGATTTTT CAAACAAAGA TGTCCTGATG CGTATAGCTA 11510 |||||||||| || || |||| | | |||||| ||| ||||| ||||| |||| | |||||||| ATGTGGCCCT ACAGAGTTGT CCAAATTTTT CAAGAAAAGA TGTCCCGATG CTTATAGCTA 540 CCCACAAGAT GATCCTACTA GCACATTTAC TTG-CCCTAG TGGTAGTACA AATTATAGGG 11451 ||||||||| |||||||| | |||||||||| ||| |||| | |||||||||| || |||| || CCCACAAGAC GATCCTACAA GCACATTTAC TTGCCCCTGG TGGTAGTACA AACTATANGG 600 TTGTTTTTTG TCCTAATGGT GTTACTAGCC CAAATTTCCC CTT 11408 ||| ||||| |||||||||| ||| || |||||||||| ||| NTGTCTTTTG TCCTAATGGT GTTGCTGATT CAAATTTCCC CTT 643 hqPGS_C08HBa0235H18.1-_SGN-E213897+ (12049 11408) ******************************************************************************** EST sequence 592 +strand 704 n (File: SGN-E212978+) 1 AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 61 TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 121 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 181 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 241 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 301 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 361 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 421 AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 481 GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC 541 CCAAGGTCCA TGTGGCCCTA CAGAGTTGTC CAAATTTTTC AAGAAAAGAT GTCCCGATGC 601 TTATAGCTAC CCACAAGACG ATCCTACAAG CACATTTACT TGCCCTGGTG GTAGTCAAAC 661 TATAGGGTTG TCTTTTGTCC TAATGGTGTT GCTGATCAAA TTTC Predicted gene structure (within gDNA segment 13834 to 10283): Exon 1 12118 11413 ( 706 n); cDNA 1 704 ( 704 n); score: 0.899 MATCH C08HBa0235H18.1- SGN-E212978+ 0.899 706 1.003 C PGS_C08HBa0235H18.1-_SGN-E212978+ (12118 11413) Alignment (genomic DNA sequence = upper lines): AAACATGGCC TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG TGACTTACAC 12059 |||||||| | ||||||| || |||||||||| | ||||| | ||| || || ||||||| || AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 60 TTATGCTGCC ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG CGGCGTCGAC 11999 |||||||||| ||| | |||| |||||||||| |||||||||| ||||| |||| |||| ||||| TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 120 CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG 11939 || |||||| |||||||||| |||| |||| |||||||||| |||||||||| |||| ||||| TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 180 GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG 11879 ||| |||||| |||||||||| |||||||||| ||| |||| |||||| ||| ||| || || GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 240 AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC 11819 |||| ||||| |||||||||| |||||||||| ||||| || |||||||| | |||||||||| AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 300 ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT 11759 ||||||||| || ||||||| |||||||||| |||||||||| ||| |||||| | |||||||| CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 360 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG 11699 |||||||||| |||||||||| |||||||||| |||||| ||| || || || | |||||||||| TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 420 GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG 11639 ||||| || |||||||||| | ||||| || |||||||||| ||||||||| | | |||| AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 480 GGTACCCGGA GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT ATTGTTGCAC 11579 |||||| ||| |||||||||| | |||||||| |||||| ||| |||||||||| |||||||||| GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC 540 ACAAGGTCCA TGTGGCCCTA CTGATTTGTC GAGATTTTTC AAACAAAGAT GTCCTGATGC 11519 ||||||||| |||||||||| | || ||||| | ||||||| || |||||| |||| ||||| CCAAGGTCCA TGTGGCCCTA CAGAGTTGTC CAAATTTTTC AAGAAAAGAT GTCCCGATGC 600 GTATAGCTAC CCACAAGATG ATCCTACTAG CACATTTACT TGCCCTAGTG GTAGTACAAA 11459 ||||||||| |||||||| | ||||||| || |||||||||| |||||| ||| ||||| |||| TTATAGCTAC CCACAAGACG ATCCTACAAG CACATTTACT TGCCCTGGTG GTAGT-CAAA 659 TTATAGGGTT GTTTTTTGTC CTAATGGTGT TACTAGCCCA AATTTC 11413 ||||||||| || ||||||| |||||||||| | || | || |||||| CTATAGGGTT GTCTTTTGTC CTAATGGTGT TGCT-GATCA AATTTC 704 hqPGS_C08HBa0235H18.1-_SGN-E212978+ (12118 11413) ******************************************************************************** EST sequence 753 +strand 547 n (File: SGN-E291342+) 1 TGGTGCCAGA CCGGTGATTG TGGTGGAGTC TTGGAATGCA AAGGATGGGG TAAACCACCA 61 AACACCTTAG CTGAATACGC TTTGAATCAA TTTAGCAACT TAGATTTCTG GGACATTTCT 121 GTTATTGATG GATTCAACAT CCCTATGTCT TTCGGCCCAA CTAACCCTGG GCCGGGAAAA 181 TGTCATCCAA TTCAATGTGT TGCTAATATA AACGGTGAAT GCCCTGGTTC ACTTAGGGTA 241 CCCGGAGGAT GTAACAACCC TTGTACTACA TTCGGAGGAC AACAATATTG TTGCACTCAA 301 GGTCCATGTG GTCCTACCGA TTTGTCAAGA TTTTTCAAAC AAAGATGTCC CGATGCCTAT 361 AGTTATCCTC AAGACGATCC AACAAGTACT TTTACTTGTC AGAGTTGGAC TACAGACTAC 421 AAGGTTATGT TTTGTCCTTA TGGCTCTACT CACAATGAAA CAACAAATTT CCCATTGGAG 481 ATTCCTACAA ATACTCTTGA AGTGGCTTAA TTAAGTAGAA ATCTTGAGTT GAGCCAATCT 541 CTTTTTT Predicted gene structure (within gDNA segment 14472 to 8459): Exon 1 11871 11418 ( 454 n); cDNA 4 455 ( 452 n); score: 0.822 Intron 1 11417 10237 (1181 n); Pd: 0.000 (s: 0.70), Pa: 0.958 (s: 0) Exon 2 10236 10232 ( 5 n); cDNA 456 460 ( 5 n); score: 0.800 MATCH C08HBa0235H18.1- SGN-E291342+ 0.822 459 0.839 C PGS_C08HBa0235H18.1-_SGN-E291342+ (11871 11418,10236 10232) Alignment (genomic DNA sequence = upper lines): TGTCAGACTG GTGATTGTGG TGGGGTCTTG CAATGTACCG GGTGGGGCAA ACCACCAAAC 11812 || ||||| | |||||||||| ||| |||||| |||| | | | ||||| || |||||||||| TGCCAGACCG GTGATTGTGG TGGAGTCTTG GAATGCAAAG GATGGGGTAA ACCACCAAAC 63 ACCCTGGCCG AGTACGCCTT GGACCAGTTT AGCAACCTAG ATTTCTGGGA CATTTCTTTA 11752 ||| | || | | ||||| || | | || ||| |||||| ||| |||||||||| ||||||| | ACCTTAGCTG AATACGCTTT GAATCAATTT AGCAACTTAG ATTTCTGGGA CATTTCTGTT 123 GTCGATGGAT TTAATATTCC AATGACTTTC GCCCCGACCA ATCCTAGTGG AGGGAAATGC 11692 | ||||||| | || || || ||| ||||| | ||| || | | ||| | || ||||| ATTGATGGAT TCAACATCCC TATGTCTTTC GGCCCAACTA ACCCTGGGCC GGGAAAATGT 183 CATGCAATTC ATTGTACGGC TAATATAAAT GGTGAATGTC CTGGTTCACT TAGGGTACCC 11632 ||| |||||| | ||| || ||||||||| |||||||| | |||||||||| |||||||||| CATCCAATTC AATGTGTTGC TAATATAAAC GGTGAATGCC CTGGTTCACT TAGGGTACCC 243 GGAGGATGTA ACAATCCTTG TACCACGTTC GGAGGACAAC AATATTGTTG CACACAAGGT 11572 |||||||||| |||| ||||| ||| || ||| |||||||||| |||||||||| ||| |||||| GGAGGATGTA ACAACCCTTG TACTACATTC GGAGGACAAC AATATTGTTG CACTCAAGGT 303 CCATGTGGCC CTACTGATTT GTCGAGATTT TTCAAACAAA GATGTCCTGA TGCGTATAGC 11512 |||||||| | |||| ||||| ||| |||||| |||||||||| ||||||| || ||| ||||| CCATGTGGTC CTACCGATTT GTCAAGATTT TTCAAACAAA GATGTCCCGA TGCCTATAGT 363 TACCCACAAG ATGATCCTAC TAGCACATTT ACTTGCCCTA GTGGTAGTAC AAATTATAGG 11452 || || |||| | ||||| || || || ||| ||||| | | || | | ||| | | || | | TATCCTCAAG ACGATCCAAC AAGTACTTTT ACTTGTCAGA GTTGGACTAC AGACTACAAG 423 GTTGTTTTTT GTCCTAATGG TGTTACTAGC CCAAATTTCC CCTTGGAGAT GCCCTCAAGT 11392 ||| | |||| ||||| |||| |||| | ||| GTTATGTTTT GTCCTTATGG CTCTACT--C ACAA...... .......... .......... 455 GATGAAGAGG CTAAGTAAAA TTGAGTCACT TTCTTTTAAA TTGCTTGAAG TAGTCGAGTT 11332 .......... .......... .......... .......... .......... .......... 455 ATATAATTGG CTTGTAATAA ACCTAATATA ATTACATGAA TAAAAGTCAC ATCATCACAA 11272 .......... .......... .......... .......... .......... .......... 455 ATATGTTGTT TCGAATATTA TTTTATGTAT ATTTTGTTAT TTACGTATTA ACTTGTCAAA 11212 .......... .......... .......... .......... .......... .......... 455 TAAAAGAATA ATATCAGTCA GTTTAAAAAC ATAAAAACTA TAATATACTG GATAAGATAA 11152 .......... .......... .......... .......... .......... .......... 455 ATAAGAACAT CTCACGAGAT TATTTTATCT CATTTTTTTA TATGATAAAA GTTCCATCAC 11092 .......... .......... .......... .......... .......... .......... 455 AAAATATAAA AATAAAATAA ATTAATCTCA AAAGTAACTA GTACCTTAAA ATAATATAAA 11032 .......... .......... .......... .......... .......... .......... 455 ATAAAATAAT CCCATTTTAT TAGAAATTAT TATCCACAAT TTTAGGGCAA AGTCAAAAGT 10972 .......... .......... .......... .......... .......... .......... 455 AGATGGAAAT ATTTGTTTAT AGGCGGCTCT TAGAACATTT TCAAGCTAAA TGATGTTAGC 10912 .......... .......... .......... .......... .......... .......... 455 TGCACGTGCT ACTTGACACA ATGCCAAAAG ATTAAATTGA GCAAAATTTA TATTTTTATT 10852 .......... .......... .......... .......... .......... .......... 455 AAAAAAAATT ATATTTATAA ACGTAGAAAA TTCACTATTT TTTTTTTATC ATTAACATGT 10792 .......... .......... .......... .......... .......... .......... 455 TTTACATATT TTAGAGGATT AAGAGTGAAA AAGATTCTAA TAACTTGTTA ACTTGATATA 10732 .......... .......... .......... .......... .......... .......... 455 ATAGATTAAC AAGTTGATTA TATCGCACTC TAAAGAATAA AATGAATTGT CAAAAATAAT 10672 .......... .......... .......... .......... .......... .......... 455 ATTAATAATT TATCGCCACT CAAAAAAATA AAAAATATTG TAGAACGTGA CTTTATCAAT 10612 .......... .......... .......... .......... .......... .......... 455 ACTAATCTCT TTTAAAACAA CGATTGATTT GAACTTCACC GAAATTGATG GAATGAAATG 10552 .......... .......... .......... .......... .......... .......... 455 ACTAAATATT GTATTGGGAT AAAATAATGG GATAATTGTA TATAATAGCA AACTAATAAC 10492 .......... .......... .......... .......... .......... .......... 455 CTAAAATAAA TGGAGTAGCT ATGATTTGAT TTAATTGTGC ACCATAGCAA ACGTTAGCCA 10432 .......... .......... .......... .......... .......... .......... 455 AAGTTTGTCA GTCGCCTCTC TCTCTTTATA CACAAAAGTG TATAAATTGT GTTTCTGTTT 10372 .......... .......... .......... .......... .......... .......... 455 TGTATAAGCG AGAGAAAACT GTATATACAC ATGCAAAAAC ATATATCTTC GTGTTATACA 10312 .......... .......... .......... .......... .......... .......... 455 CTTAATTATA CAATTTACAA ATATTTTACT TCAATTCAAT TGTAGACAAA TGCAAATTTT 10252 .......... .......... .......... .......... .......... .......... 455 ATACAAATAT TGCAGCGAAA 10232 |||| .......... .....TGAAA 460 hqPGS_C08HBa0235H18.1-_SGN-E291342+ (11871 11418) ******************************************************************************** EST sequence 600 +strand 716 n (File: SGN-E212860+) 1 ACAACTGTCC ATACACCGTA TGGGCAGCGG CGACTCCCGT AGGAGGTGGC CGACGTCTCG 61 AGAGAGGTCA AAGTTGGTGG TTTTGGGCTC CACCGGGCAC CAAAATGGCA CGTATTTGGG 121 GTCGTACTAA TTGCAATTTT GATGGTGCTG GTAGAGGTTG GTGCCAGACC GGTGATTGTG 181 GTGGAGTCTT GGAATGCAAA GGATGGGGTA AACCACCAAA CACCTTAGCT GAATACGCTT 241 TGAATCAATT TAGCAACTTA GATTTCTGGG ACATTTCTGT TATTGATGGA TTCAACATCC 301 CTATGTCTTT CGGCCCAACT AACCCTGGGC CGGGAAAATG TCATCCAATT CAATGTGTTG 361 CTAATATAAA CGGTGAATGC CCTGGTTCAC TTAGGGTACC CGGAGGATGT AACAACCCTT 421 GTACTACATT CGGAGGACAA CAATATTGTT GCACTCAAGG TCCATGTGGT CCTACCGATT 481 TGTCAAGATT TTTCAAACAA AGATGTCCCG ATGCCTATAG TTATCCTCAA GACGATCCAA 541 CAAGTACTTT TACTTGTCAG AGTTGGACTA CAGACTACNA GGTTATGTTT TGTCCTTATG 601 GCTCTACTCA CAATGAAACA ACAAATTTCC CATTGGAGAT TCCTACAAAT ACTCTTTGAG 661 TGGCTTAATT AAGTAGAAAT CTTGAGTTGA GCCCATCTCT TTTTTTGGTA ATTTTT Predicted gene structure (within gDNA segment 16052 to 8349): Exon 1 12032 11424 ( 609 n); cDNA 1 609 ( 609 n); score: 0.814 Intron 1 11423 10237 (1187 n); Pd: 0.000 (s: 0.68), Pa: 0.958 (s: 0) Exon 2 10236 10209 ( 28 n); cDNA 610 635 ( 26 n); score: 0.607 MATCH C08HBa0235H18.1- SGN-E212860+ 0.814 637 0.890 C PGS_C08HBa0235H18.1-_SGN-E212860+ (12032 11424,10236 10209) Alignment (genomic DNA sequence = upper lines): ACAACTGTCC ATACACCGTC TGGGCGGCGT CGACCCCAAT AGGCGGTGGT CGACGTCTTG 11973 |||||||||| ||||||||| ||||| ||| |||| || | ||| ||||| |||||||| | ACAACTGTCC ATACACCGTA TGGGCAGCGG CGACTCCCGT AGGAGGTGGC CGACGTCTCG 60 ATCGAGGCCA AACATGGGTC ATCAATGCAC CGAGGGGCAC TAAGATGGCA CGTATATGGG 11913 | |||| || || ||| | || | | |||||| || |||||| ||||| |||| AGAGAGGTCA AAGTTGGTGG TTTTGGGCTC CACCGGGCAC CAAAATGGCA CGTATTTGGG 120 GTCGTACGAA TTGCAACTTT GATGGTGCTG GTAGAGGTTC ATGTCAGACT GGTGATTGTG 11853 ||||||| || |||||| ||| |||||||||| ||||||||| || ||||| |||||||||| GTCGTACTAA TTGCAATTTT GATGGTGCTG GTAGAGGTTG GTGCCAGACC GGTGATTGTG 180 GTGGGGTCTT GCAATGTACC GGGTGGGGCA AACCACCAAA CACCCTGGCC GAGTACGCCT 11793 |||| ||||| | |||| | || ||||| | |||||||||| |||| | || || ||||| | GTGGAGTCTT GGAATGCAAA GGATGGGGTA AACCACCAAA CACCTTAGCT GAATACGCTT 240 TGGACCAGTT TAGCAACCTA GATTTCTGGG ACATTTCTTT AGTCGATGGA TTTAATATTC 11733 || | || || ||||||| || |||||||||| |||||||| | | |||||| || || || | TGAATCAATT TAGCAACTTA GATTTCTGGG ACATTTCTGT TATTGATGGA TTCAACATCC 300 CAATGACTTT CGCCCCGACC AATCCTAGTG GAGGGAAATG CCATGCAATT CATTGTACGG 11673 | ||| |||| || ||| || || ||| | || ||||| ||| ||||| || ||| | CTATGTCTTT CGGCCCAACT AACCCTGGGC CGGGAAAATG TCATCCAATT CAATGTGTTG 360 CTAATATAAA TGGTGAATGT CCTGGTTCAC TTAGGGTACC CGGAGGATGT AACAATCCTT 11613 |||||||||| |||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CTAATATAAA CGGTGAATGC CCTGGTTCAC TTAGGGTACC CGGAGGATGT AACAACCCTT 420 GTACCACGTT CGGAGGACAA CAATATTGTT GCACACAAGG TCCATGTGGC CCTACTGATT 11553 |||| || || |||||||||| |||||||||| |||| ||||| ||||||||| ||||| |||| GTACTACATT CGGAGGACAA CAATATTGTT GCACTCAAGG TCCATGTGGT CCTACCGATT 480 TGTCGAGATT TTTCAAACAA AGATGTCCTG ATGCGTATAG CTACCCACAA GATGATCCTA 11493 |||| ||||| |||||||||| |||||||| | |||| ||||| || || ||| || ||||| | TGTCAAGATT TTTCAAACAA AGATGTCCCG ATGCCTATAG TTATCCTCAA GACGATCCAA 540 CTAGCACATT TACTTGCCCT AGTGGTAGTA CAAATTATAG GGTTGTTTTT TGTCCTAATG 11433 | || || || |||||| | ||| | | || || | || |||| | ||| |||||| ||| CAAGTACTTT TACTTGTCAG AGTTGGACTA CAGACTACNA GGTTATGTTT TGTCCTTATG 600 GTGTTACTAG CCCAAATTTC CCCTTGGAGA TGCCCTCAAG TGATGAAGAG GCTAAGTAAA 11373 | |||| GCTCTACTC. .......... .......... .......... .......... .......... 609 ATTGAGTCAC TTTCTTTTAA ATTGCTTGAA GTAGTCGAGT TATATAATTG GCTTGTAATA 11313 .......... .......... .......... .......... .......... .......... 609 AACCTAATAT AATTACATGA ATAAAAGTCA CATCATCACA AATATGTTGT TTCGAATATT 11253 .......... .......... .......... .......... .......... .......... 609 ATTTTATGTA TATTTTGTTA TTTACGTATT AACTTGTCAA ATAAAAGAAT AATATCAGTC 11193 .......... .......... .......... .......... .......... .......... 609 AGTTTAAAAA CATAAAAACT ATAATATACT GGATAAGATA AATAAGAACA TCTCACGAGA 11133 .......... .......... .......... .......... .......... .......... 609 TTATTTTATC TCATTTTTTT ATATGATAAA AGTTCCATCA CAAAATATAA AAATAAAATA 11073 .......... .......... .......... .......... .......... .......... 609 AATTAATCTC AAAAGTAACT AGTACCTTAA AATAATATAA AATAAAATAA TCCCATTTTA 11013 .......... .......... .......... .......... .......... .......... 609 TTAGAAATTA TTATCCACAA TTTTAGGGCA AAGTCAAAAG TAGATGGAAA TATTTGTTTA 10953 .......... .......... .......... .......... .......... .......... 609 TAGGCGGCTC TTAGAACATT TTCAAGCTAA ATGATGTTAG CTGCACGTGC TACTTGACAC 10893 .......... .......... .......... .......... .......... .......... 609 AATGCCAAAA GATTAAATTG AGCAAAATTT ATATTTTTAT TAAAAAAAAT TATATTTATA 10833 .......... .......... .......... .......... .......... .......... 609 AACGTAGAAA ATTCACTATT TTTTTTTTAT CATTAACATG TTTTACATAT TTTAGAGGAT 10773 .......... .......... .......... .......... .......... .......... 609 TAAGAGTGAA AAAGATTCTA ATAACTTGTT AACTTGATAT AATAGATTAA CAAGTTGATT 10713 .......... .......... .......... .......... .......... .......... 609 ATATCGCACT CTAAAGAATA AAATGAATTG TCAAAAATAA TATTAATAAT TTATCGCCAC 10653 .......... .......... .......... .......... .......... .......... 609 TCAAAAAAAT AAAAAATATT GTAGAACGTG ACTTTATCAA TACTAATCTC TTTTAAAACA 10593 .......... .......... .......... .......... .......... .......... 609 ACGATTGATT TGAACTTCAC CGAAATTGAT GGAATGAAAT GACTAAATAT TGTATTGGGA 10533 .......... .......... .......... .......... .......... .......... 609 TAAAATAATG GGATAATTGT ATATAATAGC AAACTAATAA CCTAAAATAA ATGGAGTAGC 10473 .......... .......... .......... .......... .......... .......... 609 TATGATTTGA TTTAATTGTG CACCATAGCA AACGTTAGCC AAAGTTTGTC AGTCGCCTCT 10413 .......... .......... .......... .......... .......... .......... 609 CTCTCTTTAT ACACAAAAGT GTATAAATTG TGTTTCTGTT TTGTATAAGC GAGAGAAAAC 10353 .......... .......... .......... .......... .......... .......... 609 TGTATATACA CATGCAAAAA CATATATCTT CGTGTTATAC ACTTAATTAT ACAATTTACA 10293 .......... .......... .......... .......... .......... .......... 609 AATATTTTAC TTCAATTCAA TTGTAGACAA ATGCAAATTT TATACAAATA TTGCAGCGAA 10233 || .......... .......... .......... .......... .......... ......ACAA 613 AAAGGCGAAC GAATTATACA ATTG 10209 | | ||| |||| | | |||| TGAAAC-AAC AAATT-TCCC ATTG 635 hqPGS_C08HBa0235H18.1-_SGN-E212860+ (12032 11424) ******************************************************************************** EST sequence 1120 +strand 736 n (File: SGN-E357015+) 1 TTGGTGGTTT TGGGCCCCAC CTGGCACTAA AATGGCACGT ATTTGGGGTC GTACTAATTG 61 CAACTTTGAT GGTGCTGGAA GAGGTTGGTG CCAGACTGGT GATTGTGGTG GAGTCCTGGA 121 TTGCAAAGGA TGGGGTAAAC CACCAAACAC CTTAGCTGAA TACGCTTTGA ACCAGTTTGG 181 TAACCTAGAT TTTTGGGATA TTTCTGTTAT TGATGGATTC AACATCCCTA TGTCTTTTGG 241 CCCAACTAAG CCTGGCCCTG GAAAATGTCA TCCAATTCAA TGCACAGCCA ATATAAACGG 301 TGAATGCCCT GGTTCACTTA GGGTACCTGG AGGATGTAAC AACCCTTGTA CAACATTCGG 361 AGGACAACAA TATTGTTGTA ATCACGGTCC ATGTGGTCCT ACTGAATTGT CAAGATTTTT 421 CAAACAAAGA TGTCCTGATG CCTATAGTTA CCCTCAAGAC GATCCAACTA GTACTTTTAC 481 TTGTCAGAGT TGGACTACAG ACTACAAGAT AATGTTCTGT CCTTATGGCT CTACTCACAA 541 TGAAACAACA AATTTCCCAT TGGAGATGCC TACAAGTACT CTTGAAGTTG CTTAATAAGT 601 AGATTCATCA TGAGTGTAGC CACCTCTTTC TTGTTCNAAA TGGTTGAGTT TTGTTCATTA 661 CTTGNCTTTT GTATATCCAC ATTTCTTTTA GTTTGTATCT TGAGGTGGCT AAGTTTTCAT 721 AACATATTGT ACTTTA Predicted gene structure (within gDNA segment 17761 to 9105): Exon 1 11958 11424 ( 535 n); cDNA 2 536 ( 535 n); score: 0.804 Intron 1 11423 10237 (1187 n); Pd: 0.000 (s: 0.64), Pa: 0.958 (s: 0) Exon 2 10236 10209 ( 28 n); cDNA 537 562 ( 26 n); score: 0.607 MATCH C08HBa0235H18.1- SGN-E357015+ 0.804 563 0.765 C PGS_C08HBa0235H18.1-_SGN-E357015+ (11958 11424,10236 10209) Alignment (genomic DNA sequence = upper lines): TGGGTCATCA ATGCACCGAG GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC 11899 ||| | || || |||||||| |||||||||| | |||||||| ||| |||||| TGGTGGTTTT GGGCCCCACC TGGCACTAAA ATGGCACGTA TTTGGGGTCG TACTAATTGC 61 AACTTTGATG GTGCTGGTAG AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA 11839 |||||||||| ||||||| || ||||| || |||||||||| |||||||||| ||| || | AACTTTGATG GTGCTGGAAG AGGTTGGTGC CAGACTGGTG ATTGTGGTGG AGTCCTGGAT 121 TGTACCGGGT GGGGCAAACC ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC 11779 || | || | |||| ||||| |||||||||| | || || | |||| ||| | ||||||| | TGCAAAGGAT GGGGTAAACC ACCAAACACC TTAGCTGAAT ACGCTTTGAA CCAGTTTGGT 181 AACCTAGATT TCTGGGACAT TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC 11719 |||||||||| | ||||| || |||| | | |||||||| | | || || || | |||| | | AACCTAGATT TTTGGGATAT TTCTGTTATT GATGGATTCA ACATCCCTAT GTCTTTTGGC 241 CCGACCAATC CTAGTGGAGG GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAATGGT 11659 || || || | || | || ||||| ||| ||||||| | | || || || |||||| ||| CCAACTAAGC CTGGCCCTGG AAAATGTCAT CCAATTCAAT GCACAGCCAA TATAAACGGT 301 GAATGTCCTG GTTCACTTAG GGTACCCGGA GGATGTAACA ATCCTTGTAC CACGTTCGGA 11599 ||||| |||| |||||||||| |||||| ||| |||||||||| | |||||||| || |||||| GAATGCCCTG GTTCACTTAG GGTACCTGGA GGATGTAACA ACCCTTGTAC AACATTCGGA 361 GGACAACAAT ATTGTTGCAC ACAAGGTCCA TGTGGCCCTA CTGATTTGTC GAGATTTTTC 11539 |||||||||| ||||||| | || |||||| ||||| |||| |||| ||||| ||||||||| GGACAACAAT ATTGTTGTAA TCACGGTCCA TGTGGTCCTA CTGAATTGTC AAGATTTTTC 421 AAACAAAGAT GTCCTGATGC GTATAGCTAC CCACAAGATG ATCCTACTAG CACATTTACT 11479 |||||||||| |||||||||| ||||| ||| || ||||| | |||| ||||| || |||||| AAACAAAGAT GTCCTGATGC CTATAGTTAC CCTCAAGACG ATCCAACTAG TACTTTTACT 481 TGCCCTAGTG GTAGTACAAA TTATAGGGTT GTTTTTTGTC CTAATGGTGT TACTAGCCCA 11419 || | ||| | | |||| | || | | | | || |||| || |||| |||| TGTCAGAGTT GGACTACAGA CTACAAGATA ATGTTCTGTC CTTATGGCTC TACTC..... 536 AATTTCCCCT TGGAGATGCC CTCAAGTGAT GAAGAGGCTA AGTAAAATTG AGTCACTTTC 11359 .......... .......... .......... .......... .......... .......... 536 TTTTAAATTG CTTGAAGTAG TCGAGTTATA TAATTGGCTT GTAATAAACC TAATATAATT 11299 .......... .......... .......... .......... .......... .......... 536 ACATGAATAA AAGTCACATC ATCACAAATA TGTTGTTTCG AATATTATTT TATGTATATT 11239 .......... .......... .......... .......... .......... .......... 536 TTGTTATTTA CGTATTAACT TGTCAAATAA AAGAATAATA TCAGTCAGTT TAAAAACATA 11179 .......... .......... .......... .......... .......... .......... 536 AAAACTATAA TATACTGGAT AAGATAAATA AGAACATCTC ACGAGATTAT TTTATCTCAT 11119 .......... .......... .......... .......... .......... .......... 536 TTTTTTATAT GATAAAAGTT CCATCACAAA ATATAAAAAT AAAATAAATT AATCTCAAAA 11059 .......... .......... .......... .......... .......... .......... 536 GTAACTAGTA CCTTAAAATA ATATAAAATA AAATAATCCC ATTTTATTAG AAATTATTAT 10999 .......... .......... .......... .......... .......... .......... 536 CCACAATTTT AGGGCAAAGT CAAAAGTAGA TGGAAATATT TGTTTATAGG CGGCTCTTAG 10939 .......... .......... .......... .......... .......... .......... 536 AACATTTTCA AGCTAAATGA TGTTAGCTGC ACGTGCTACT TGACACAATG CCAAAAGATT 10879 .......... .......... .......... .......... .......... .......... 536 AAATTGAGCA AAATTTATAT TTTTATTAAA AAAAATTATA TTTATAAACG TAGAAAATTC 10819 .......... .......... .......... .......... .......... .......... 536 ACTATTTTTT TTTTATCATT AACATGTTTT ACATATTTTA GAGGATTAAG AGTGAAAAAG 10759 .......... .......... .......... .......... .......... .......... 536 ATTCTAATAA CTTGTTAACT TGATATAATA GATTAACAAG TTGATTATAT CGCACTCTAA 10699 .......... .......... .......... .......... .......... .......... 536 AGAATAAAAT GAATTGTCAA AAATAATATT AATAATTTAT CGCCACTCAA AAAAATAAAA 10639 .......... .......... .......... .......... .......... .......... 536 AATATTGTAG AACGTGACTT TATCAATACT AATCTCTTTT AAAACAACGA TTGATTTGAA 10579 .......... .......... .......... .......... .......... .......... 536 CTTCACCGAA ATTGATGGAA TGAAATGACT AAATATTGTA TTGGGATAAA ATAATGGGAT 10519 .......... .......... .......... .......... .......... .......... 536 AATTGTATAT AATAGCAAAC TAATAACCTA AAATAAATGG AGTAGCTATG ATTTGATTTA 10459 .......... .......... .......... .......... .......... .......... 536 ATTGTGCACC ATAGCAAACG TTAGCCAAAG TTTGTCAGTC GCCTCTCTCT CTTTATACAC 10399 .......... .......... .......... .......... .......... .......... 536 AAAAGTGTAT AAATTGTGTT TCTGTTTTGT ATAAGCGAGA GAAAACTGTA TATACACATG 10339 .......... .......... .......... .......... .......... .......... 536 CAAAAACATA TATCTTCGTG TTATACACTT AATTATACAA TTTACAAATA TTTTACTTCA 10279 .......... .......... .......... .......... .......... .......... 536 ATTCAATTGT AGACAAATGC AAATTTTATA CAAATATTGC AGCGAAAAAG GCGAACGAAT 10219 || | | ||| ||| .......... .......... .......... .......... ..ACAATGAA AC-AACAAAT 553 TATACAATTG 10209 | | | |||| T-TCCCATTG 562 hqPGS_C08HBa0235H18.1-_SGN-E357015+ (11958 11424) ******************************************************************************** EST sequence 1181 +strand 658 n (File: SGN-E357685+) 1 CTAAAATGGC ACGTATTTGG GGTCGTACTA ATTGCAACTT TGATGGTGCT GGAAGAGGTT 61 GGTGCCAGAC TGGTGATTGT GGTGGAGTCC TGGATTGCAA AGGATGGGGT AAACCACCAA 121 ACACCTTAGC TGAATACGCT TTGAACCAGT TTGGTAACCT AGATTTTTGG GATATTTCTG 181 TTATTGATGG ATTCAACATC CCTATGTCTT TTGGCCCAAC TAAGCCTGGC CCTGGAAAAT 241 GTCATCCAAT TCAATGCACA GCCAATATAA ACGGTGAATG CCCTGGTTCA CTTAGGGTAC 301 CTGGAGGATG TAACAACCCT TGTACAACAT TCGGAGGACA ACAATATTGT TGTAATCACG 361 GTCCATGTGG TCCTACTGAA TTGTCAAGAT TTTTCAAACA AAGATGTCCT GATGCCTATA 421 GTTACCCTCA AGACGATCCA ACTAGTACTT TTACTTGTCA GAGTTGGACT ACAGACTACA 481 AGATAATGTT CTGTCCTTAT GGCTCTACTC ACAATGAAAC AACAAATTTC CCATTGGAGA 541 TGCCTACAAG TACTCTTGAA GTTGCTTAAT AAGTAGATTC ATCATGAGTG TAGCCACCTC 601 TTTCTTNGTC AAATGGTTGA GTTTTGTTCA TTACTTGTCT TTTGTATTAT CCACATTT Predicted gene structure (within gDNA segment 17501 to 9025): Exon 1 11933 11424 ( 510 n); cDNA 1 510 ( 510 n); score: 0.820 Intron 1 11423 10237 (1187 n); Pd: 0.000 (s: 0.64), Pa: 0.958 (s: 0) Exon 2 10236 10209 ( 28 n); cDNA 511 536 ( 26 n); score: 0.607 MATCH C08HBa0235H18.1- SGN-E357685+ 0.820 538 0.818 C PGS_C08HBa0235H18.1-_SGN-E357685+ (11933 11424,10236 10209) Alignment (genomic DNA sequence = upper lines): CTAAGATGGC ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT GGTAGAGGTT 11874 |||| ||||| |||||| ||| |||||||| | |||||||||| |||||||||| || ||||||| CTAAAATGGC ACGTATTTGG GGTCGTACTA ATTGCAACTT TGATGGTGCT GGAAGAGGTT 60 CATGTCAGAC TGGTGATTGT GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA 11814 || ||||| |||||||||| ||||| ||| || | || | || ||||| |||||||||| GGTGCCAGAC TGGTGATTGT GGTGGAGTCC TGGATTGCAA AGGATGGGGT AAACCACCAA 120 ACACCCTGGC CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT 11754 ||||| | || || ||||| ||| |||||| || | ||||| |||||| ||| || |||||| ACACCTTAGC TGAATACGCT TTGAACCAGT TTGGTAACCT AGATTTTTGG GATATTTCTG 180 TAGTCGATGG ATTTAATATT CCAATGACTT TCGCCCCGAC CAATCCTAGT GGAGGGAAAT 11694 | | ||||| ||| || || || ||| ||| | | ||| || || ||| | || |||| TTATTGATGG ATTCAACATC CCTATGTCTT TTGGCCCAAC TAAGCCTGGC CCTGGAAAAT 240 GCCATGCAAT TCATTGTACG GCTAATATAA ATGGTGAATG TCCTGGTTCA CTTAGGGTAC 11634 | ||| |||| ||| || || || ||||||| | |||||||| ||||||||| |||||||||| GTCATCCAAT TCAATGCACA GCCAATATAA ACGGTGAATG CCCTGGTTCA CTTAGGGTAC 300 CCGGAGGATG TAACAATCCT TGTACCACGT TCGGAGGACA ACAATATTGT TGCACACAAG 11574 | |||||||| |||||| ||| ||||| || | |||||||||| |||||||||| || | || | CTGGAGGATG TAACAACCCT TGTACAACAT TCGGAGGACA ACAATATTGT TGTAATCACG 360 GTCCATGTGG CCCTACTGAT TTGTCGAGAT TTTTCAAACA AAGATGTCCT GATGCGTATA 11514 |||||||||| |||||||| ||||| |||| |||||||||| |||||||||| ||||| |||| GTCCATGTGG TCCTACTGAA TTGTCAAGAT TTTTCAAACA AAGATGTCCT GATGCCTATA 420 GCTACCCACA AGATGATCCT ACTAGCACAT TTACTTGCCC TAGTGGTAGT ACAAATTATA 11454 | ||||| || ||| ||||| ||||| || | ||||||| | ||| | | | ||| | || | GTTACCCTCA AGACGATCCA ACTAGTACTT TTACTTGTCA GAGTTGGACT ACAGACTACA 480 GGGTTGTTTT TTGTCCTAAT GGTGTTACTA GCCCAAATTT CCCCTTGGAG ATGCCCTCAA 11394 | | | || |||||| || || |||| AGATAATGTT CTGTCCTTAT GGCTCTACTC .......... .......... .......... 510 GTGATGAAGA GGCTAAGTAA AATTGAGTCA CTTTCTTTTA AATTGCTTGA AGTAGTCGAG 11334 .......... .......... .......... .......... .......... .......... 510 TTATATAATT GGCTTGTAAT AAACCTAATA TAATTACATG AATAAAAGTC ACATCATCAC 11274 .......... .......... .......... .......... .......... .......... 510 AAATATGTTG TTTCGAATAT TATTTTATGT ATATTTTGTT ATTTACGTAT TAACTTGTCA 11214 .......... .......... .......... .......... .......... .......... 510 AATAAAAGAA TAATATCAGT CAGTTTAAAA ACATAAAAAC TATAATATAC TGGATAAGAT 11154 .......... .......... .......... .......... .......... .......... 510 AAATAAGAAC ATCTCACGAG ATTATTTTAT CTCATTTTTT TATATGATAA AAGTTCCATC 11094 .......... .......... .......... .......... .......... .......... 510 ACAAAATATA AAAATAAAAT AAATTAATCT CAAAAGTAAC TAGTACCTTA AAATAATATA 11034 .......... .......... .......... .......... .......... .......... 510 AAATAAAATA ATCCCATTTT ATTAGAAATT ATTATCCACA ATTTTAGGGC AAAGTCAAAA 10974 .......... .......... .......... .......... .......... .......... 510 GTAGATGGAA ATATTTGTTT ATAGGCGGCT CTTAGAACAT TTTCAAGCTA AATGATGTTA 10914 .......... .......... .......... .......... .......... .......... 510 GCTGCACGTG CTACTTGACA CAATGCCAAA AGATTAAATT GAGCAAAATT TATATTTTTA 10854 .......... .......... .......... .......... .......... .......... 510 TTAAAAAAAA TTATATTTAT AAACGTAGAA AATTCACTAT TTTTTTTTTA TCATTAACAT 10794 .......... .......... .......... .......... .......... .......... 510 GTTTTACATA TTTTAGAGGA TTAAGAGTGA AAAAGATTCT AATAACTTGT TAACTTGATA 10734 .......... .......... .......... .......... .......... .......... 510 TAATAGATTA ACAAGTTGAT TATATCGCAC TCTAAAGAAT AAAATGAATT GTCAAAAATA 10674 .......... .......... .......... .......... .......... .......... 510 ATATTAATAA TTTATCGCCA CTCAAAAAAA TAAAAAATAT TGTAGAACGT GACTTTATCA 10614 .......... .......... .......... .......... .......... .......... 510 ATACTAATCT CTTTTAAAAC AACGATTGAT TTGAACTTCA CCGAAATTGA TGGAATGAAA 10554 .......... .......... .......... .......... .......... .......... 510 TGACTAAATA TTGTATTGGG ATAAAATAAT GGGATAATTG TATATAATAG CAAACTAATA 10494 .......... .......... .......... .......... .......... .......... 510 ACCTAAAATA AATGGAGTAG CTATGATTTG ATTTAATTGT GCACCATAGC AAACGTTAGC 10434 .......... .......... .......... .......... .......... .......... 510 CAAAGTTTGT CAGTCGCCTC TCTCTCTTTA TACACAAAAG TGTATAAATT GTGTTTCTGT 10374 .......... .......... .......... .......... .......... .......... 510 TTTGTATAAG CGAGAGAAAA CTGTATATAC ACATGCAAAA ACATATATCT TCGTGTTATA 10314 .......... .......... .......... .......... .......... .......... 510 CACTTAATTA TACAATTTAC AAATATTTTA CTTCAATTCA ATTGTAGACA AATGCAAATT 10254 .......... .......... .......... .......... .......... .......... 510 TTATACAAAT ATTGCAGCGA AAAAGGCGAA CGAATTATAC AATTG 10209 | | | | || | |||| | | |||| .......... .......ACA ATGAAAC-AA CAAATT-TCC CATTG 536 hqPGS_C08HBa0235H18.1-_SGN-E357685+ (11933 11424) ******************************************************************************** EST sequence 330 -strand 773 n (File: SGN-E548946-) 1 CAAAAATGGC ACGTATTTGG GGTCGTACTA ATTGCAATTT TGATGGTGCT GGTAGAGGTT 61 GGTGCCAGAC CGGTGATTGT GGTGGAGTCT TGGAATGCAA AGGATGGGGT AAACCACCAA 121 ACACCTTAGC TGAATACGCT TTGAATCAAT TTAGCAACTT AGATTTCTGG GACATTTCTG 181 TTATTGATGG ATTCAACATC CCTATGTCTT TCGGCCCAAC TAACCCTGGG CCGGGAAAAT 241 GTCATCCAAT TCAATGTGTT GCTAATATAA ACGGTGAATG CCCTGGTTCA CTTAGGGTAC 301 CCGGAGGATG TAACAACCCT TGTACTACAT TCGGAGGACA ACAATATTGT TGCACTCAAG 361 GTCCATGTGG TCCTACCGAT TTGTCAAGAT TTTTCAAACA AAGATGTCCC GATGCCTATA 421 GTTATCCTCA AGACGATCCA ACAAGTACTT TTACTTGTCA GAGTTGGACT ACAGACTACA 481 AGGTTATGTT TTGTCCTTAT GGCTCTACTC ACAATGAAAC AACAAATTTC CCATTGGAGA 541 TTCCTACAAA TACTCTTGAA GTGGCTTAAT TAAGTAGAAA TCTTGAGTTG AGCCAATCTC 601 TTTTTTGTTA AATTTGTTTT GAAGATGGAC ATTGTCTTTA ATTTGCCTTG TACACATTTC 661 TTTTACATTT GTTTGTTTGA AGTGGCTAAG ATCTGAATAA CAATCTATGA TCGATGCTTT 721 GTCTTATATA TGGTATTTTA ATTTTAAATT GAAATTATAT CGGAAAAAAA AAA Predicted gene structure (within gDNA segment 15072 to 6799): Exon 1 11931 11424 ( 508 n); cDNA 3 510 ( 508 n); score: 0.833 Intron 1 11423 10237 (1187 n); Pd: 0.000 (s: 0.70), Pa: 0.958 (s: 0) Exon 2 10236 10209 ( 28 n); cDNA 511 536 ( 26 n); score: 0.607 PPA cDNA 764 773 MATCH C08HBa0235H18.1- SGN-E548946- 0.833 536 0.693 C PGS_C08HBa0235H18.1-_SGN-E548946- (11931 11424,10236 10209) Alignment (genomic DNA sequence = upper lines): AAGATGGCAC GTATATGGGG TCGTACGAAT TGCAACTTTG ATGGTGCTGG TAGAGGTTCA 11872 || ||||||| |||| ||||| |||||| ||| ||||| |||| |||||||||| |||||||| AAAATGGCAC GTATTTGGGG TCGTACTAAT TGCAATTTTG ATGGTGCTGG TAGAGGTTGG 62 TGTCAGACTG GTGATTGTGG TGGGGTCTTG CAATGTACCG GGTGGGGCAA ACCACCAAAC 11812 || ||||| | |||||||||| ||| |||||| |||| | | | ||||| || |||||||||| TGCCAGACCG GTGATTGTGG TGGAGTCTTG GAATGCAAAG GATGGGGTAA ACCACCAAAC 122 ACCCTGGCCG AGTACGCCTT GGACCAGTTT AGCAACCTAG ATTTCTGGGA CATTTCTTTA 11752 ||| | || | | ||||| || | | || ||| |||||| ||| |||||||||| ||||||| | ACCTTAGCTG AATACGCTTT GAATCAATTT AGCAACTTAG ATTTCTGGGA CATTTCTGTT 182 GTCGATGGAT TTAATATTCC AATGACTTTC GCCCCGACCA ATCCTAGTGG AGGGAAATGC 11692 | ||||||| | || || || ||| ||||| | ||| || | | ||| | || ||||| ATTGATGGAT TCAACATCCC TATGTCTTTC GGCCCAACTA ACCCTGGGCC GGGAAAATGT 242 CATGCAATTC ATTGTACGGC TAATATAAAT GGTGAATGTC CTGGTTCACT TAGGGTACCC 11632 ||| |||||| | ||| || ||||||||| |||||||| | |||||||||| |||||||||| CATCCAATTC AATGTGTTGC TAATATAAAC GGTGAATGCC CTGGTTCACT TAGGGTACCC 302 GGAGGATGTA ACAATCCTTG TACCACGTTC GGAGGACAAC AATATTGTTG CACACAAGGT 11572 |||||||||| |||| ||||| ||| || ||| |||||||||| |||||||||| ||| |||||| GGAGGATGTA ACAACCCTTG TACTACATTC GGAGGACAAC AATATTGTTG CACTCAAGGT 362 CCATGTGGCC CTACTGATTT GTCGAGATTT TTCAAACAAA GATGTCCTGA TGCGTATAGC 11512 |||||||| | |||| ||||| ||| |||||| |||||||||| ||||||| || ||| ||||| CCATGTGGTC CTACCGATTT GTCAAGATTT TTCAAACAAA GATGTCCCGA TGCCTATAGT 422 TACCCACAAG ATGATCCTAC TAGCACATTT ACTTGCCCTA GTGGTAGTAC AAATTATAGG 11452 || || |||| | ||||| || || || ||| ||||| | | || | | ||| | | || | | TATCCTCAAG ACGATCCAAC AAGTACTTTT ACTTGTCAGA GTTGGACTAC AGACTACAAG 482 GTTGTTTTTT GTCCTAATGG TGTTACTAGC CCAAATTTCC CCTTGGAGAT GCCCTCAAGT 11392 ||| | |||| ||||| |||| |||| GTTATGTTTT GTCCTTATGG CTCTACTC.. .......... .......... .......... 510 GATGAAGAGG CTAAGTAAAA TTGAGTCACT TTCTTTTAAA TTGCTTGAAG TAGTCGAGTT 11332 .......... .......... .......... .......... .......... .......... 510 ATATAATTGG CTTGTAATAA ACCTAATATA ATTACATGAA TAAAAGTCAC ATCATCACAA 11272 .......... .......... .......... .......... .......... .......... 510 ATATGTTGTT TCGAATATTA TTTTATGTAT ATTTTGTTAT TTACGTATTA ACTTGTCAAA 11212 .......... .......... .......... .......... .......... .......... 510 TAAAAGAATA ATATCAGTCA GTTTAAAAAC ATAAAAACTA TAATATACTG GATAAGATAA 11152 .......... .......... .......... .......... .......... .......... 510 ATAAGAACAT CTCACGAGAT TATTTTATCT CATTTTTTTA TATGATAAAA GTTCCATCAC 11092 .......... .......... .......... .......... .......... .......... 510 AAAATATAAA AATAAAATAA ATTAATCTCA AAAGTAACTA GTACCTTAAA ATAATATAAA 11032 .......... .......... .......... .......... .......... .......... 510 ATAAAATAAT CCCATTTTAT TAGAAATTAT TATCCACAAT TTTAGGGCAA AGTCAAAAGT 10972 .......... .......... .......... .......... .......... .......... 510 AGATGGAAAT ATTTGTTTAT AGGCGGCTCT TAGAACATTT TCAAGCTAAA TGATGTTAGC 10912 .......... .......... .......... .......... .......... .......... 510 TGCACGTGCT ACTTGACACA ATGCCAAAAG ATTAAATTGA GCAAAATTTA TATTTTTATT 10852 .......... .......... .......... .......... .......... .......... 510 AAAAAAAATT ATATTTATAA ACGTAGAAAA TTCACTATTT TTTTTTTATC ATTAACATGT 10792 .......... .......... .......... .......... .......... .......... 510 TTTACATATT TTAGAGGATT AAGAGTGAAA AAGATTCTAA TAACTTGTTA ACTTGATATA 10732 .......... .......... .......... .......... .......... .......... 510 ATAGATTAAC AAGTTGATTA TATCGCACTC TAAAGAATAA AATGAATTGT CAAAAATAAT 10672 .......... .......... .......... .......... .......... .......... 510 ATTAATAATT TATCGCCACT CAAAAAAATA AAAAATATTG TAGAACGTGA CTTTATCAAT 10612 .......... .......... .......... .......... .......... .......... 510 ACTAATCTCT TTTAAAACAA CGATTGATTT GAACTTCACC GAAATTGATG GAATGAAATG 10552 .......... .......... .......... .......... .......... .......... 510 ACTAAATATT GTATTGGGAT AAAATAATGG GATAATTGTA TATAATAGCA AACTAATAAC 10492 .......... .......... .......... .......... .......... .......... 510 CTAAAATAAA TGGAGTAGCT ATGATTTGAT TTAATTGTGC ACCATAGCAA ACGTTAGCCA 10432 .......... .......... .......... .......... .......... .......... 510 AAGTTTGTCA GTCGCCTCTC TCTCTTTATA CACAAAAGTG TATAAATTGT GTTTCTGTTT 10372 .......... .......... .......... .......... .......... .......... 510 TGTATAAGCG AGAGAAAACT GTATATACAC ATGCAAAAAC ATATATCTTC GTGTTATACA 10312 .......... .......... .......... .......... .......... .......... 510 CTTAATTATA CAATTTACAA ATATTTTACT TCAATTCAAT TGTAGACAAA TGCAAATTTT 10252 .......... .......... .......... .......... .......... .......... 510 ATACAAATAT TGCAGCGAAA AAGGCGAACG AATTATACAA TTG 10209 || | | ||| |||| | | | ||| .......... .....ACAAT GAAAC-AACA AATT-TCCCA TTG 536 hqPGS_C08HBa0235H18.1-_SGN-E548946- (11931 11424) ******************************************************************************** EST sequence 1153 +strand 669 n (File: SGN-E357464+) 1 GCACGTATTT GGGGTCGTAC TAATTGCAAC TTTGATGGTG CTGGAAGAGG TTGGTGCCAG 61 ACTGGTGATT GTGGTGGAGT CCTGGATTGC AAAGGATGGG GTAAACCACC AAACACCTTA 121 GCTGAATACG CTTTGAACCA GTTTGGTAAC CTAGATTTTT GGGATATTTC TGTTATTGAT 181 GGATTCAACA TCCCTATGTC TTTTGGCCCA ACTAAGCCTG GCCCTGGAAA ATGTCATCCA 241 ATTCAATGCA CAGCCAATAT AAACGGTGAA TGCCCTGGTT CACTTAGGGT ACCTGGAGGA 301 TGTAACAACC CTTGTACAAC ATTCGGAGGA CAACAATATT GTTGTAATCA CGGTCCATGT 361 GGTCCTACTG AATTGTCAAG ATTTTTCAAA CAAAGATGTC CTGATGCCTA TAGTTACCCT 421 CAAGACGATC CAACTAGTAC TTTTACTTGT CAGAGTTGGA CTACAGACTA CAAGATAATG 481 TTCTGTCCTT ATGGCTCTAC TCACAATGAA ACAACAAATT TCCCATTGGA GATGCCTACA 541 AGTACTCTTG AAGTTGCTTA ATAAGTAGAT TCATCATGAG TGTAGCCACC TCTTTCTTGN 601 TCAAAATGGG TTGAGTTTTG TCATTACTTG TCTTTTGTAA TATCCACATT TTCTTTAGTT 661 TGTTATCTT Predicted gene structure (within gDNA segment 17421 to 9435): Exon 1 11925 11424 ( 502 n); cDNA 1 502 ( 502 n); score: 0.819 Intron 1 11423 10237 (1187 n); Pd: 0.000 (s: 0.64), Pa: 0.958 (s: 0) Exon 2 10236 10209 ( 28 n); cDNA 503 528 ( 26 n); score: 0.607 MATCH C08HBa0235H18.1- SGN-E357464+ 0.819 530 0.792 C PGS_C08HBa0235H18.1-_SGN-E357464+ (11925 11424,10236 10209) Alignment (genomic DNA sequence = upper lines): GCACGTATAT GGGGTCGTAC GAATTGCAAC TTTGATGGTG CTGGTAGAGG TTCATGTCAG 11866 |||||||| | |||||||||| ||||||||| |||||||||| |||| ||||| || || ||| GCACGTATTT GGGGTCGTAC TAATTGCAAC TTTGATGGTG CTGGAAGAGG TTGGTGCCAG 60 ACTGGTGATT GTGGTGGGGT CTTGCAATGT ACCGGGTGGG GCAAACCACC AAACACCCTG 11806 |||||||||| ||||||| || | || | || | || |||| | |||||||| ||||||| | ACTGGTGATT GTGGTGGAGT CCTGGATTGC AAAGGATGGG GTAAACCACC AAACACCTTA 120 GCCGAGTACG CCTTGGACCA GTTTAGCAAC CTAGATTTCT GGGACATTTC TTTAGTCGAT 11746 || || |||| | ||| |||| |||| | ||| |||||||| | |||| ||||| | | | ||| GCTGAATACG CTTTGAACCA GTTTGGTAAC CTAGATTTTT GGGATATTTC TGTTATTGAT 180 GGATTTAATA TTCCAATGAC TTTCGCCCCG ACCAATCCTA GTGGAGGGAA ATGCCATGCA 11686 ||||| || | | || ||| | ||| | ||| || || ||| | || || ||| ||| || GGATTCAACA TCCCTATGTC TTTTGGCCCA ACTAAGCCTG GCCCTGGAAA ATGTCATCCA 240 ATTCATTGTA CGGCTAATAT AAATGGTGAA TGTCCTGGTT CACTTAGGGT ACCCGGAGGA 11626 ||||| || | | || ||||| ||| |||||| || ||||||| |||||||||| ||| |||||| ATTCAATGCA CAGCCAATAT AAACGGTGAA TGCCCTGGTT CACTTAGGGT ACCTGGAGGA 300 TGTAACAATC CTTGTACCAC GTTCGGAGGA CAACAATATT GTTGCACACA AGGTCCATGT 11566 |||||||| | ||||||| || ||||||||| |||||||||| |||| | || ||||||||| TGTAACAACC CTTGTACAAC ATTCGGAGGA CAACAATATT GTTGTAATCA CGGTCCATGT 360 GGCCCTACTG ATTTGTCGAG ATTTTTCAAA CAAAGATGTC CTGATGCGTA TAGCTACCCA 11506 || ||||||| | ||||| || |||||||||| |||||||||| ||||||| || ||| ||||| GGTCCTACTG AATTGTCAAG ATTTTTCAAA CAAAGATGTC CTGATGCCTA TAGTTACCCT 420 CAAGATGATC CTACTAGCAC ATTTACTTGC CCTAGTGGTA GTACAAATTA TAGGGTTGTT 11446 ||||| |||| | ||||| || |||||||| | ||| | | |||| | || | | | | CAAGACGATC CAACTAGTAC TTTTACTTGT CAGAGTTGGA CTACAGACTA CAAGATAATG 480 TTTTGTCCTA ATGGTGTTAC TAGCCCAAAT TTCCCCTTGG AGATGCCCTC AAGTGATGAA 11386 || |||||| |||| ||| | TTCTGTCCTT ATGGCTCTAC TC........ .......... .......... .......... 502 GAGGCTAAGT AAAATTGAGT CACTTTCTTT TAAATTGCTT GAAGTAGTCG AGTTATATAA 11326 .......... .......... .......... .......... .......... .......... 502 TTGGCTTGTA ATAAACCTAA TATAATTACA TGAATAAAAG TCACATCATC ACAAATATGT 11266 .......... .......... .......... .......... .......... .......... 502 TGTTTCGAAT ATTATTTTAT GTATATTTTG TTATTTACGT ATTAACTTGT CAAATAAAAG 11206 .......... .......... .......... .......... .......... .......... 502 AATAATATCA GTCAGTTTAA AAACATAAAA ACTATAATAT ACTGGATAAG ATAAATAAGA 11146 .......... .......... .......... .......... .......... .......... 502 ACATCTCACG AGATTATTTT ATCTCATTTT TTTATATGAT AAAAGTTCCA TCACAAAATA 11086 .......... .......... .......... .......... .......... .......... 502 TAAAAATAAA ATAAATTAAT CTCAAAAGTA ACTAGTACCT TAAAATAATA TAAAATAAAA 11026 .......... .......... .......... .......... .......... .......... 502 TAATCCCATT TTATTAGAAA TTATTATCCA CAATTTTAGG GCAAAGTCAA AAGTAGATGG 10966 .......... .......... .......... .......... .......... .......... 502 AAATATTTGT TTATAGGCGG CTCTTAGAAC ATTTTCAAGC TAAATGATGT TAGCTGCACG 10906 .......... .......... .......... .......... .......... .......... 502 TGCTACTTGA CACAATGCCA AAAGATTAAA TTGAGCAAAA TTTATATTTT TATTAAAAAA 10846 .......... .......... .......... .......... .......... .......... 502 AATTATATTT ATAAACGTAG AAAATTCACT ATTTTTTTTT TATCATTAAC ATGTTTTACA 10786 .......... .......... .......... .......... .......... .......... 502 TATTTTAGAG GATTAAGAGT GAAAAAGATT CTAATAACTT GTTAACTTGA TATAATAGAT 10726 .......... .......... .......... .......... .......... .......... 502 TAACAAGTTG ATTATATCGC ACTCTAAAGA ATAAAATGAA TTGTCAAAAA TAATATTAAT 10666 .......... .......... .......... .......... .......... .......... 502 AATTTATCGC CACTCAAAAA AATAAAAAAT ATTGTAGAAC GTGACTTTAT CAATACTAAT 10606 .......... .......... .......... .......... .......... .......... 502 CTCTTTTAAA ACAACGATTG ATTTGAACTT CACCGAAATT GATGGAATGA AATGACTAAA 10546 .......... .......... .......... .......... .......... .......... 502 TATTGTATTG GGATAAAATA ATGGGATAAT TGTATATAAT AGCAAACTAA TAACCTAAAA 10486 .......... .......... .......... .......... .......... .......... 502 TAAATGGAGT AGCTATGATT TGATTTAATT GTGCACCATA GCAAACGTTA GCCAAAGTTT 10426 .......... .......... .......... .......... .......... .......... 502 GTCAGTCGCC TCTCTCTCTT TATACACAAA AGTGTATAAA TTGTGTTTCT GTTTTGTATA 10366 .......... .......... .......... .......... .......... .......... 502 AGCGAGAGAA AACTGTATAT ACACATGCAA AAACATATAT CTTCGTGTTA TACACTTAAT 10306 .......... .......... .......... .......... .......... .......... 502 TATACAATTT ACAAATATTT TACTTCAATT CAATTGTAGA CAAATGCAAA TTTTATACAA 10246 .......... .......... .......... .......... .......... .......... 502 ATATTGCAGC GAAAAAGGCG AACGAATTAT ACAATTG 10209 || | | ||| |||| | | |||| .........A CAATGAAAC- AACAAATT-T CCCATTG 528 hqPGS_C08HBa0235H18.1-_SGN-E357464+ (11925 11424) ******************************************************************************** EST sequence 508 +strand 645 n (File: SGN-E350938+) 1 TGCAACTTTG ATGGTGCTGG AAGAGGTTGG TGCCAGACTG GTGATTGTGG TGGAGTCCTG 61 GATTGCAAAG GATGGGGTAA ACCACCAAAC ACCTTAGCTG AATACGCTTT GAACCAGTTT 121 GGTAACCTAG ATTTTTGGGA TATTTCTGTT ATTGATGGAT TCAACATCCC TATGTCTTTT 181 GGCCCAACTA AGCCTGGCCC TGGAAAATGT CATCCAATTC AATGCACAGC CAATATAAAC 241 GGTGAATGCC CTGGTTCACT TAGGGTACCT GGAGGATGTA ACAACCCTTG TACAACATTC 301 GGAGGACAAC AATATTGTTG TAATCACGGT CCATGTGGTC CTACTGAATT GTCAAGATTT 361 TTCAAACAAA GATGTCCTGA TGCCTATAGT TACCCTCAAG ACGATCCAAC TAGTACTTTT 421 ACTTGTCAGA GTTGGACTAC AGACTACAAG ATAATGTTCT GTCCTTATGG CTCTACTCAC 481 AATGAAACAA CAAATTTCCC ATTGGAGATG CCTACAAGTA CTCTTGAAGT TGCTTAATAA 541 GTAGATTCAT CATGAGTGTA GCCACCTCTT TCTTGTTCAA AATGGTTGAG TTTTGTTCAT 601 TACTTGTCTT TTGTATTATC CACATTTCTT TTAGTTTGTT ATCTT Predicted gene structure (within gDNA segment 17181 to 9435): Exon 1 11901 11424 ( 478 n); cDNA 1 478 ( 478 n); score: 0.814 Intron 1 11423 10237 (1187 n); Pd: 0.000 (s: 0.64), Pa: 0.958 (s: 0) Exon 2 10236 10209 ( 28 n); cDNA 479 504 ( 26 n); score: 0.607 MATCH C08HBa0235H18.1- SGN-E350938+ 0.814 506 0.784 C PGS_C08HBa0235H18.1-_SGN-E350938+ (11901 11424,10236 10209) Alignment (genomic DNA sequence = upper lines): TGCAACTTTG ATGGTGCTGG TAGAGGTTCA TGTCAGACTG GTGATTGTGG TGGGGTCTTG 11842 |||||||||| |||||||||| ||||||| || ||||||| |||||||||| ||| ||| || TGCAACTTTG ATGGTGCTGG AAGAGGTTGG TGCCAGACTG GTGATTGTGG TGGAGTCCTG 60 CAATGTACCG GGTGGGGCAA ACCACCAAAC ACCCTGGCCG AGTACGCCTT GGACCAGTTT 11782 | || | | | ||||| || |||||||||| ||| | || | | ||||| || | |||||||| GATTGCAAAG GATGGGGTAA ACCACCAAAC ACCTTAGCTG AATACGCTTT GAACCAGTTT 120 AGCAACCTAG ATTTCTGGGA CATTTCTTTA GTCGATGGAT TTAATATTCC AATGACTTTC 11722 | ||||||| |||| ||||| |||||| | | ||||||| | || || || ||| |||| GGTAACCTAG ATTTTTGGGA TATTTCTGTT ATTGATGGAT TCAACATCCC TATGTCTTTT 180 GCCCCGACCA ATCCTAGTGG AGGGAAATGC CATGCAATTC ATTGTACGGC TAATATAAAT 11662 | ||| || | | ||| | || ||||| ||| |||||| | || || || |||||||| GGCCCAACTA AGCCTGGCCC TGGAAAATGT CATCCAATTC AATGCACAGC CAATATAAAC 240 GGTGAATGTC CTGGTTCACT TAGGGTACCC GGAGGATGTA ACAATCCTTG TACCACGTTC 11602 |||||||| | |||||||||| ||||||||| |||||||||| |||| ||||| ||| || ||| GGTGAATGCC CTGGTTCACT TAGGGTACCT GGAGGATGTA ACAACCCTTG TACAACATTC 300 GGAGGACAAC AATATTGTTG CACACAAGGT CCATGTGGCC CTACTGATTT GTCGAGATTT 11542 |||||||||| |||||||||| | || ||| |||||||| | ||||||| || ||| |||||| GGAGGACAAC AATATTGTTG TAATCACGGT CCATGTGGTC CTACTGAATT GTCAAGATTT 360 TTCAAACAAA GATGTCCTGA TGCGTATAGC TACCCACAAG ATGATCCTAC TAGCACATTT 11482 |||||||||| |||||||||| ||| ||||| ||||| |||| | ||||| || ||| || ||| TTCAAACAAA GATGTCCTGA TGCCTATAGT TACCCTCAAG ACGATCCAAC TAGTACTTTT 420 ACTTGCCCTA GTGGTAGTAC AAATTATAGG GTTGTTTTTT GTCCTAATGG TGTTACTAGC 11422 ||||| | | || | | ||| | | || | | | | || | ||||| |||| |||| ACTTGTCAGA GTTGGACTAC AGACTACAAG ATAATGTTCT GTCCTTATGG CTCTACTC.. 478 CCAAATTTCC CCTTGGAGAT GCCCTCAAGT GATGAAGAGG CTAAGTAAAA TTGAGTCACT 11362 .......... .......... .......... .......... .......... .......... 478 TTCTTTTAAA TTGCTTGAAG TAGTCGAGTT ATATAATTGG CTTGTAATAA ACCTAATATA 11302 .......... .......... .......... .......... .......... .......... 478 ATTACATGAA TAAAAGTCAC ATCATCACAA ATATGTTGTT TCGAATATTA TTTTATGTAT 11242 .......... .......... .......... .......... .......... .......... 478 ATTTTGTTAT TTACGTATTA ACTTGTCAAA TAAAAGAATA ATATCAGTCA GTTTAAAAAC 11182 .......... .......... .......... .......... .......... .......... 478 ATAAAAACTA TAATATACTG GATAAGATAA ATAAGAACAT CTCACGAGAT TATTTTATCT 11122 .......... .......... .......... .......... .......... .......... 478 CATTTTTTTA TATGATAAAA GTTCCATCAC AAAATATAAA AATAAAATAA ATTAATCTCA 11062 .......... .......... .......... .......... .......... .......... 478 AAAGTAACTA GTACCTTAAA ATAATATAAA ATAAAATAAT CCCATTTTAT TAGAAATTAT 11002 .......... .......... .......... .......... .......... .......... 478 TATCCACAAT TTTAGGGCAA AGTCAAAAGT AGATGGAAAT ATTTGTTTAT AGGCGGCTCT 10942 .......... .......... .......... .......... .......... .......... 478 TAGAACATTT TCAAGCTAAA TGATGTTAGC TGCACGTGCT ACTTGACACA ATGCCAAAAG 10882 .......... .......... .......... .......... .......... .......... 478 ATTAAATTGA GCAAAATTTA TATTTTTATT AAAAAAAATT ATATTTATAA ACGTAGAAAA 10822 .......... .......... .......... .......... .......... .......... 478 TTCACTATTT TTTTTTTATC ATTAACATGT TTTACATATT TTAGAGGATT AAGAGTGAAA 10762 .......... .......... .......... .......... .......... .......... 478 AAGATTCTAA TAACTTGTTA ACTTGATATA ATAGATTAAC AAGTTGATTA TATCGCACTC 10702 .......... .......... .......... .......... .......... .......... 478 TAAAGAATAA AATGAATTGT CAAAAATAAT ATTAATAATT TATCGCCACT CAAAAAAATA 10642 .......... .......... .......... .......... .......... .......... 478 AAAAATATTG TAGAACGTGA CTTTATCAAT ACTAATCTCT TTTAAAACAA CGATTGATTT 10582 .......... .......... .......... .......... .......... .......... 478 GAACTTCACC GAAATTGATG GAATGAAATG ACTAAATATT GTATTGGGAT AAAATAATGG 10522 .......... .......... .......... .......... .......... .......... 478 GATAATTGTA TATAATAGCA AACTAATAAC CTAAAATAAA TGGAGTAGCT ATGATTTGAT 10462 .......... .......... .......... .......... .......... .......... 478 TTAATTGTGC ACCATAGCAA ACGTTAGCCA AAGTTTGTCA GTCGCCTCTC TCTCTTTATA 10402 .......... .......... .......... .......... .......... .......... 478 CACAAAAGTG TATAAATTGT GTTTCTGTTT TGTATAAGCG AGAGAAAACT GTATATACAC 10342 .......... .......... .......... .......... .......... .......... 478 ATGCAAAAAC ATATATCTTC GTGTTATACA CTTAATTATA CAATTTACAA ATATTTTACT 10282 .......... .......... .......... .......... .......... .......... 478 TCAATTCAAT TGTAGACAAA TGCAAATTTT ATACAAATAT TGCAGCGAAA AAGGCGAACG 10222 || | | ||| .......... .......... .......... .......... .....ACAAT GAAAC-AACA 492 AATTATACAA TTG 10209 |||| | | | ||| AATT-TCCCA TTG 504 hqPGS_C08HBa0235H18.1-_SGN-E350938+ (11901 11424) ******************************************************************************** EST sequence 662 +strand 710 n (File: SGN-E373166+) 1 TGGTGCCAGA CCGGTGATTG TGGTGGAGTC TTGGAATGCA AAGGATGGGG TAAACCACCA 61 AACACCTTAG CTGAATACGC TTTGAATCAA TTTAGCAACT TAGATTTCTG GGACATTTCT 121 GTTATTGATG GATTCAACAT CCCTATGTCT TTCGGCCCAA CTAACCCTGG GCCGGGAAAA 181 TGTCATCCAA TTCAATGTGT TGCTAATATA AACGGTGAAT GCCCTGGTTC ACTTAGGGTA 241 CCCGGAGGAT GTAACAACCC TTGTACTACA TTCGGAGGAC AACAATATTG TTGCACTCAA 301 GGTCCATGTG GTCCTACCGA TTTGTCAAGA TTTTTCAAAC AAAGATGTCC CGATGCCTAT 361 AGTTATCCTC AAGACGATCC AACAAGTACT TTTACTTGTC AGAGTTGGAC TACAGACTAC 421 AAGGTTATGT TTTGTCCTTA TGGCTCTACT CACAATGAAA CAACAAATTT CCCATTGGAG 481 ATTCCTACAA ATACTCTTGA AGTGGCTTAA TTAAGTAGAA ATCTTGAGTT GAGCCAATCT 541 CTTTTTTGTT AAATTTGTTT TGAAGATGGA CATTGTCTTT AATTTGCCTT GTACACATTT 601 CTTTTACATT TGTTTGTTTG AAGTGGCTAA GATCTGAATA ACAATCTATG ATCGATGCTT 661 TGTCTTATAT ATGGGATTTT AATTTTTAAA TTGAAAAAAA AAAAAAAAAA Predicted gene structure (within gDNA segment 14472 to 6829): Exon 1 11871 11424 ( 448 n); cDNA 4 451 ( 448 n); score: 0.824 Intron 1 11423 10237 (1187 n); Pd: 0.000 (s: 0.70), Pa: 0.958 (s: 0) Exon 2 10236 10209 ( 28 n); cDNA 452 477 ( 26 n); score: 0.607 PPA cDNA 694 710 MATCH C08HBa0235H18.1- SGN-E373166+ 0.824 476 0.670 C PGS_C08HBa0235H18.1-_SGN-E373166+ (11871 11424,10236 10209) Alignment (genomic DNA sequence = upper lines): TGTCAGACTG GTGATTGTGG TGGGGTCTTG CAATGTACCG GGTGGGGCAA ACCACCAAAC 11812 || ||||| | |||||||||| ||| |||||| |||| | | | ||||| || |||||||||| TGCCAGACCG GTGATTGTGG TGGAGTCTTG GAATGCAAAG GATGGGGTAA ACCACCAAAC 63 ACCCTGGCCG AGTACGCCTT GGACCAGTTT AGCAACCTAG ATTTCTGGGA CATTTCTTTA 11752 ||| | || | | ||||| || | | || ||| |||||| ||| |||||||||| ||||||| | ACCTTAGCTG AATACGCTTT GAATCAATTT AGCAACTTAG ATTTCTGGGA CATTTCTGTT 123 GTCGATGGAT TTAATATTCC AATGACTTTC GCCCCGACCA ATCCTAGTGG AGGGAAATGC 11692 | ||||||| | || || || ||| ||||| | ||| || | | ||| | || ||||| ATTGATGGAT TCAACATCCC TATGTCTTTC GGCCCAACTA ACCCTGGGCC GGGAAAATGT 183 CATGCAATTC ATTGTACGGC TAATATAAAT GGTGAATGTC CTGGTTCACT TAGGGTACCC 11632 ||| |||||| | ||| || ||||||||| |||||||| | |||||||||| |||||||||| CATCCAATTC AATGTGTTGC TAATATAAAC GGTGAATGCC CTGGTTCACT TAGGGTACCC 243 GGAGGATGTA ACAATCCTTG TACCACGTTC GGAGGACAAC AATATTGTTG CACACAAGGT 11572 |||||||||| |||| ||||| ||| || ||| |||||||||| |||||||||| ||| |||||| GGAGGATGTA ACAACCCTTG TACTACATTC GGAGGACAAC AATATTGTTG CACTCAAGGT 303 CCATGTGGCC CTACTGATTT GTCGAGATTT TTCAAACAAA GATGTCCTGA TGCGTATAGC 11512 |||||||| | |||| ||||| ||| |||||| |||||||||| ||||||| || ||| ||||| CCATGTGGTC CTACCGATTT GTCAAGATTT TTCAAACAAA GATGTCCCGA TGCCTATAGT 363 TACCCACAAG ATGATCCTAC TAGCACATTT ACTTGCCCTA GTGGTAGTAC AAATTATAGG 11452 || || |||| | ||||| || || || ||| ||||| | | || | | ||| | | || | | TATCCTCAAG ACGATCCAAC AAGTACTTTT ACTTGTCAGA GTTGGACTAC AGACTACAAG 423 GTTGTTTTTT GTCCTAATGG TGTTACTAGC CCAAATTTCC CCTTGGAGAT GCCCTCAAGT 11392 ||| | |||| ||||| |||| |||| GTTATGTTTT GTCCTTATGG CTCTACTC.. .......... .......... .......... 451 GATGAAGAGG CTAAGTAAAA TTGAGTCACT TTCTTTTAAA TTGCTTGAAG TAGTCGAGTT 11332 .......... .......... .......... .......... .......... .......... 451 ATATAATTGG CTTGTAATAA ACCTAATATA ATTACATGAA TAAAAGTCAC ATCATCACAA 11272 .......... .......... .......... .......... .......... .......... 451 ATATGTTGTT TCGAATATTA TTTTATGTAT ATTTTGTTAT TTACGTATTA ACTTGTCAAA 11212 .......... .......... .......... .......... .......... .......... 451 TAAAAGAATA ATATCAGTCA GTTTAAAAAC ATAAAAACTA TAATATACTG GATAAGATAA 11152 .......... .......... .......... .......... .......... .......... 451 ATAAGAACAT CTCACGAGAT TATTTTATCT CATTTTTTTA TATGATAAAA GTTCCATCAC 11092 .......... .......... .......... .......... .......... .......... 451 AAAATATAAA AATAAAATAA ATTAATCTCA AAAGTAACTA GTACCTTAAA ATAATATAAA 11032 .......... .......... .......... .......... .......... .......... 451 ATAAAATAAT CCCATTTTAT TAGAAATTAT TATCCACAAT TTTAGGGCAA AGTCAAAAGT 10972 .......... .......... .......... .......... .......... .......... 451 AGATGGAAAT ATTTGTTTAT AGGCGGCTCT TAGAACATTT TCAAGCTAAA TGATGTTAGC 10912 .......... .......... .......... .......... .......... .......... 451 TGCACGTGCT ACTTGACACA ATGCCAAAAG ATTAAATTGA GCAAAATTTA TATTTTTATT 10852 .......... .......... .......... .......... .......... .......... 451 AAAAAAAATT ATATTTATAA ACGTAGAAAA TTCACTATTT TTTTTTTATC ATTAACATGT 10792 .......... .......... .......... .......... .......... .......... 451 TTTACATATT TTAGAGGATT AAGAGTGAAA AAGATTCTAA TAACTTGTTA ACTTGATATA 10732 .......... .......... .......... .......... .......... .......... 451 ATAGATTAAC AAGTTGATTA TATCGCACTC TAAAGAATAA AATGAATTGT CAAAAATAAT 10672 .......... .......... .......... .......... .......... .......... 451 ATTAATAATT TATCGCCACT CAAAAAAATA AAAAATATTG TAGAACGTGA CTTTATCAAT 10612 .......... .......... .......... .......... .......... .......... 451 ACTAATCTCT TTTAAAACAA CGATTGATTT GAACTTCACC GAAATTGATG GAATGAAATG 10552 .......... .......... .......... .......... .......... .......... 451 ACTAAATATT GTATTGGGAT AAAATAATGG GATAATTGTA TATAATAGCA AACTAATAAC 10492 .......... .......... .......... .......... .......... .......... 451 CTAAAATAAA TGGAGTAGCT ATGATTTGAT TTAATTGTGC ACCATAGCAA ACGTTAGCCA 10432 .......... .......... .......... .......... .......... .......... 451 AAGTTTGTCA GTCGCCTCTC TCTCTTTATA CACAAAAGTG TATAAATTGT GTTTCTGTTT 10372 .......... .......... .......... .......... .......... .......... 451 TGTATAAGCG AGAGAAAACT GTATATACAC ATGCAAAAAC ATATATCTTC GTGTTATACA 10312 .......... .......... .......... .......... .......... .......... 451 CTTAATTATA CAATTTACAA ATATTTTACT TCAATTCAAT TGTAGACAAA TGCAAATTTT 10252 .......... .......... .......... .......... .......... .......... 451 ATACAAATAT TGCAGCGAAA AAGGCGAACG AATTATACAA TTG 10209 || | | ||| |||| | | | ||| .......... .....ACAAT GAAAC-AACA AATT-TCCCA TTG 477 hqPGS_C08HBa0235H18.1-_SGN-E373166+ (11871 11424) ******************************************************************************** EST sequence 450 +strand 591 n (File: SGN-E551414+) 1 TTGGAATGCA AAGGATGGGG TAAACCACCA AACACCTTAG CTGAATACGC TTTGAATCAA 61 TTTAGCAACT TAGATTTCTG GGACATTTCT GTTATTGATG GATTCAACAT CCCTATGTCT 121 TTCGGCCCAA CTAACCCTGG GCCGGGAAAA TGTCATCCAA TTCAATGTGT TGCTAATATA 181 AACGGTGAAT GCCCTGGTTC ACTTAGGGTA CCCGGAGGAT GTAACAACCC TTGTACTACA 241 TTCGGAGGAC AACAATATTG TTGCACTCAA GGTCCATGTG GTCCTACCGA TTTGTCAAGA 301 TTTTTCAAAC AAAGATGTCC CGATGCCTAT AGTTATCCTC AAGACGATCC AACAAGTACT 361 TTTACTTGTC AGAGTTGGAC TACAGACTAC AAGGTTATGT TTTGTCCTTA TGGCTCTACT 421 CACAATGAAA CAACAAATTT CCCATTGGAG ATTCCTACAA ATACTCTTGA AGTGGCTTAA 481 TTAAGTAGAA ATCTTGAGTT GAGCCAATCT CTTTTTTGTT AAATTTGTTT TGAAGATGGA 541 CATTGTCTTT AATTTGCCTT GTACACATTT CTTTTACATT TGTTTGTTTG A Predicted gene structure (within gDNA segment 14172 to 7719): Exon 1 11844 11424 ( 421 n); cDNA 1 421 ( 421 n); score: 0.819 Intron 1 11423 10237 (1187 n); Pd: 0.000 (s: 0.70), Pa: 0.958 (s: 0) Exon 2 10236 10209 ( 28 n); cDNA 422 447 ( 26 n); score: 0.607 MATCH C08HBa0235H18.1- SGN-E551414+ 0.819 449 0.760 C PGS_C08HBa0235H18.1-_SGN-E551414+ (11844 11424,10236 10209) Alignment (genomic DNA sequence = upper lines): TTGCAATGTA CCGGGTGGGG CAAACCACCA AACACCCTGG CCGAGTACGC CTTGGACCAG 11785 ||| |||| | || ||||| ||||||||| |||||| | | | || ||||| ||| | || TTGGAATGCA AAGGATGGGG TAAACCACCA AACACCTTAG CTGAATACGC TTTGAATCAA 60 TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG GATTTAATAT TCCAATGACT 11725 ||||||||| |||||||||| |||||||||| | | |||| |||| || || || ||| || TTTAGCAACT TAGATTTCTG GGACATTTCT GTTATTGATG GATTCAACAT CCCTATGTCT 120 TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA TTCATTGTAC GGCTAATATA 11665 |||| ||| | | || ||| | || ||| || ||| ||| |||| ||| ||||||||| TTCGGCCCAA CTAACCCTGG GCCGGGAAAA TGTCATCCAA TTCAATGTGT TGCTAATATA 180 AATGGTGAAT GTCCTGGTTC ACTTAGGGTA CCCGGAGGAT GTAACAATCC TTGTACCACG 11605 || ||||||| | |||||||| |||||||||| |||||||||| ||||||| || |||||| || AACGGTGAAT GCCCTGGTTC ACTTAGGGTA CCCGGAGGAT GTAACAACCC TTGTACTACA 240 TTCGGAGGAC AACAATATTG TTGCACACAA GGTCCATGTG GCCCTACTGA TTTGTCGAGA 11545 |||||||||| |||||||||| |||||| ||| |||||||||| | ||||| || |||||| ||| TTCGGAGGAC AACAATATTG TTGCACTCAA GGTCCATGTG GTCCTACCGA TTTGTCAAGA 300 TTTTTCAAAC AAAGATGTCC TGATGCGTAT AGCTACCCAC AAGATGATCC TACTAGCACA 11485 |||||||||| |||||||||| ||||| ||| || || || | |||| ||||| || || || TTTTTCAAAC AAAGATGTCC CGATGCCTAT AGTTATCCTC AAGACGATCC AACAAGTACT 360 TTTACTTGCC CTAGTGGTAG TACAAATTAT AGGGTTGTTT TTTGTCCTAA TGGTGTTACT 11425 |||||||| | ||| | | |||| | || | |||| | | |||||||| | ||| |||| TTTACTTGTC AGAGTTGGAC TACAGACTAC AAGGTTATGT TTTGTCCTTA TGGCTCTACT 420 AGCCCAAATT TCCCCTTGGA GATGCCCTCA AGTGATGAAG AGGCTAAGTA AAATTGAGTC 11365 C......... .......... .......... .......... .......... .......... 421 ACTTTCTTTT AAATTGCTTG AAGTAGTCGA GTTATATAAT TGGCTTGTAA TAAACCTAAT 11305 .......... .......... .......... .......... .......... .......... 421 ATAATTACAT GAATAAAAGT CACATCATCA CAAATATGTT GTTTCGAATA TTATTTTATG 11245 .......... .......... .......... .......... .......... .......... 421 TATATTTTGT TATTTACGTA TTAACTTGTC AAATAAAAGA ATAATATCAG TCAGTTTAAA 11185 .......... .......... .......... .......... .......... .......... 421 AACATAAAAA CTATAATATA CTGGATAAGA TAAATAAGAA CATCTCACGA GATTATTTTA 11125 .......... .......... .......... .......... .......... .......... 421 TCTCATTTTT TTATATGATA AAAGTTCCAT CACAAAATAT AAAAATAAAA TAAATTAATC 11065 .......... .......... .......... .......... .......... .......... 421 TCAAAAGTAA CTAGTACCTT AAAATAATAT AAAATAAAAT AATCCCATTT TATTAGAAAT 11005 .......... .......... .......... .......... .......... .......... 421 TATTATCCAC AATTTTAGGG CAAAGTCAAA AGTAGATGGA AATATTTGTT TATAGGCGGC 10945 .......... .......... .......... .......... .......... .......... 421 TCTTAGAACA TTTTCAAGCT AAATGATGTT AGCTGCACGT GCTACTTGAC ACAATGCCAA 10885 .......... .......... .......... .......... .......... .......... 421 AAGATTAAAT TGAGCAAAAT TTATATTTTT ATTAAAAAAA ATTATATTTA TAAACGTAGA 10825 .......... .......... .......... .......... .......... .......... 421 AAATTCACTA TTTTTTTTTT ATCATTAACA TGTTTTACAT ATTTTAGAGG ATTAAGAGTG 10765 .......... .......... .......... .......... .......... .......... 421 AAAAAGATTC TAATAACTTG TTAACTTGAT ATAATAGATT AACAAGTTGA TTATATCGCA 10705 .......... .......... .......... .......... .......... .......... 421 CTCTAAAGAA TAAAATGAAT TGTCAAAAAT AATATTAATA ATTTATCGCC ACTCAAAAAA 10645 .......... .......... .......... .......... .......... .......... 421 ATAAAAAATA TTGTAGAACG TGACTTTATC AATACTAATC TCTTTTAAAA CAACGATTGA 10585 .......... .......... .......... .......... .......... .......... 421 TTTGAACTTC ACCGAAATTG ATGGAATGAA ATGACTAAAT ATTGTATTGG GATAAAATAA 10525 .......... .......... .......... .......... .......... .......... 421 TGGGATAATT GTATATAATA GCAAACTAAT AACCTAAAAT AAATGGAGTA GCTATGATTT 10465 .......... .......... .......... .......... .......... .......... 421 GATTTAATTG TGCACCATAG CAAACGTTAG CCAAAGTTTG TCAGTCGCCT CTCTCTCTTT 10405 .......... .......... .......... .......... .......... .......... 421 ATACACAAAA GTGTATAAAT TGTGTTTCTG TTTTGTATAA GCGAGAGAAA ACTGTATATA 10345 .......... .......... .......... .......... .......... .......... 421 CACATGCAAA AACATATATC TTCGTGTTAT ACACTTAATT ATACAATTTA CAAATATTTT 10285 .......... .......... .......... .......... .......... .......... 421 ACTTCAATTC AATTGTAGAC AAATGCAAAT TTTATACAAA TATTGCAGCG AAAAAGGCGA 10225 || | | | .......... .......... .......... .......... ........AC AATGAAAC-A 432 ACGAATTATA CAATTG 10209 || |||| | | |||| ACAAATT-TC CCATTG 447 hqPGS_C08HBa0235H18.1-_SGN-E551414+ (11844 11424) ******************************************************************************** EST sequence 914 +strand 593 n (File: SGN-E353171+) 1 TTTGAACCAG TTTGGTAACC TAGATTTTTG GGATATTTCT GTTATTGATG GATTCAACAT 61 CCCTATGTCT TTTGGCCCAA CTAAGCCTGG CCCTGGAAAA TGTCATCCAA TTCAATGCAC 121 AGCCAATATA AACGGTGAAT GCCCTGGTTC ACTTAGGGTA CCTGGAGGAT GTAACAACCC 181 TTGTACAACA TTCGGAGGAC AACAATATTG TTGTAATCAC GGTCCATGTG GTCCTACTGA 241 ATTGTCAAGA TTTTTCAAAC AAAGATGTCC TGATGCCTAT AGTTACCCTC AAGACGATCC 301 AACTAGTACT TTTACTTGTC AGAGTTGGAC TACAGACTAC AAGATAATGT TCTGTCCTTA 361 TGGCTCTACT CACAATGAAA CAACAAATTT CCCATTGGAG ATGCCTACAA GTACTCTTGA 421 AGTTGCTTAA TAAGTAGATT CATCATGAGT GTAGCCACCT CTTTCTTGTT CAAAATGGTT 481 GAGTTTTGTT CATTACTTGT CTTTTGTATT ATCCACATTT CTTTTAGTTT GTTATCTTGA 541 NGTGGCTAAG ATTTCAATAA CATATTGTAC TTTAATTTGT CTTNAAAAAA AAA Predicted gene structure (within gDNA segment 16111 to 9485): Exon 1 11793 11424 ( 370 n); cDNA 2 371 ( 370 n); score: 0.808 Intron 1 11423 10237 (1187 n); Pd: 0.000 (s: 0.64), Pa: 0.958 (s: 0) Exon 2 10236 10209 ( 28 n); cDNA 372 397 ( 26 n); score: 0.607 MATCH C08HBa0235H18.1- SGN-E353171+ 0.808 398 0.671 C PGS_C08HBa0235H18.1-_SGN-E353171+ (11793 11424,10236 10209) Alignment (genomic DNA sequence = upper lines): TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG ATTTAATATT 11734 ||| |||||| || | ||||| |||||| ||| || |||||| | | ||||| ||| || || TTGAACCAGT TTGGTAACCT AGATTTTTGG GATATTTCTG TTATTGATGG ATTCAACATC 61 CCAATGACTT TCGCCCCGAC CAATCCTAGT GGAGGGAAAT GCCATGCAAT TCATTGTACG 11674 || ||| ||| | | ||| || || ||| | || |||| | ||| |||| ||| || || CCTATGTCTT TTGGCCCAAC TAAGCCTGGC CCTGGAAAAT GTCATCCAAT TCAATGCACA 121 GCTAATATAA ATGGTGAATG TCCTGGTTCA CTTAGGGTAC CCGGAGGATG TAACAATCCT 11614 || ||||||| | |||||||| ||||||||| |||||||||| | |||||||| |||||| ||| GCCAATATAA ACGGTGAATG CCCTGGTTCA CTTAGGGTAC CTGGAGGATG TAACAACCCT 181 TGTACCACGT TCGGAGGACA ACAATATTGT TGCACACAAG GTCCATGTGG CCCTACTGAT 11554 ||||| || | |||||||||| |||||||||| || | || | |||||||||| |||||||| TGTACAACAT TCGGAGGACA ACAATATTGT TGTAATCACG GTCCATGTGG TCCTACTGAA 241 TTGTCGAGAT TTTTCAAACA AAGATGTCCT GATGCGTATA GCTACCCACA AGATGATCCT 11494 ||||| |||| |||||||||| |||||||||| ||||| |||| | ||||| || ||| ||||| TTGTCAAGAT TTTTCAAACA AAGATGTCCT GATGCCTATA GTTACCCTCA AGACGATCCA 301 ACTAGCACAT TTACTTGCCC TAGTGGTAGT ACAAATTATA GGGTTGTTTT TTGTCCTAAT 11434 ||||| || | ||||||| | ||| | | | ||| | || | | | | || |||||| || ACTAGTACTT TTACTTGTCA GAGTTGGACT ACAGACTACA AGATAATGTT CTGTCCTTAT 361 GGTGTTACTA GCCCAAATTT CCCCTTGGAG ATGCCCTCAA GTGATGAAGA GGCTAAGTAA 11374 || |||| GGCTCTACTC .......... .......... .......... .......... .......... 371 AATTGAGTCA CTTTCTTTTA AATTGCTTGA AGTAGTCGAG TTATATAATT GGCTTGTAAT 11314 .......... .......... .......... .......... .......... .......... 371 AAACCTAATA TAATTACATG AATAAAAGTC ACATCATCAC AAATATGTTG TTTCGAATAT 11254 .......... .......... .......... .......... .......... .......... 371 TATTTTATGT ATATTTTGTT ATTTACGTAT TAACTTGTCA AATAAAAGAA TAATATCAGT 11194 .......... .......... .......... .......... .......... .......... 371 CAGTTTAAAA ACATAAAAAC TATAATATAC TGGATAAGAT AAATAAGAAC ATCTCACGAG 11134 .......... .......... .......... .......... .......... .......... 371 ATTATTTTAT CTCATTTTTT TATATGATAA AAGTTCCATC ACAAAATATA AAAATAAAAT 11074 .......... .......... .......... .......... .......... .......... 371 AAATTAATCT CAAAAGTAAC TAGTACCTTA AAATAATATA AAATAAAATA ATCCCATTTT 11014 .......... .......... .......... .......... .......... .......... 371 ATTAGAAATT ATTATCCACA ATTTTAGGGC AAAGTCAAAA GTAGATGGAA ATATTTGTTT 10954 .......... .......... .......... .......... .......... .......... 371 ATAGGCGGCT CTTAGAACAT TTTCAAGCTA AATGATGTTA GCTGCACGTG CTACTTGACA 10894 .......... .......... .......... .......... .......... .......... 371 CAATGCCAAA AGATTAAATT GAGCAAAATT TATATTTTTA TTAAAAAAAA TTATATTTAT 10834 .......... .......... .......... .......... .......... .......... 371 AAACGTAGAA AATTCACTAT TTTTTTTTTA TCATTAACAT GTTTTACATA TTTTAGAGGA 10774 .......... .......... .......... .......... .......... .......... 371 TTAAGAGTGA AAAAGATTCT AATAACTTGT TAACTTGATA TAATAGATTA ACAAGTTGAT 10714 .......... .......... .......... .......... .......... .......... 371 TATATCGCAC TCTAAAGAAT AAAATGAATT GTCAAAAATA ATATTAATAA TTTATCGCCA 10654 .......... .......... .......... .......... .......... .......... 371 CTCAAAAAAA TAAAAAATAT TGTAGAACGT GACTTTATCA ATACTAATCT CTTTTAAAAC 10594 .......... .......... .......... .......... .......... .......... 371 AACGATTGAT TTGAACTTCA CCGAAATTGA TGGAATGAAA TGACTAAATA TTGTATTGGG 10534 .......... .......... .......... .......... .......... .......... 371 ATAAAATAAT GGGATAATTG TATATAATAG CAAACTAATA ACCTAAAATA AATGGAGTAG 10474 .......... .......... .......... .......... .......... .......... 371 CTATGATTTG ATTTAATTGT GCACCATAGC AAACGTTAGC CAAAGTTTGT CAGTCGCCTC 10414 .......... .......... .......... .......... .......... .......... 371 TCTCTCTTTA TACACAAAAG TGTATAAATT GTGTTTCTGT TTTGTATAAG CGAGAGAAAA 10354 .......... .......... .......... .......... .......... .......... 371 CTGTATATAC ACATGCAAAA ACATATATCT TCGTGTTATA CACTTAATTA TACAATTTAC 10294 .......... .......... .......... .......... .......... .......... 371 AAATATTTTA CTTCAATTCA ATTGTAGACA AATGCAAATT TTATACAAAT ATTGCAGCGA 10234 | .......... .......... .......... .......... .......... .......ACA 374 AAAAGGCGAA CGAATTATAC AATTG 10209 | | | || | |||| | | |||| ATGAAAC-AA CAAATT-TCC CATTG 397 hqPGS_C08HBa0235H18.1-_SGN-E353171+ (11793 11424) ******************************************************************************** EST sequence 979 +strand 582 n (File: SGN-E308347+) 1 TTTGAACCAG TTTGGTAACC TAGATTTTTG GGATATTTCT GGGATTGATG GATTCAACAT 61 CCCTATGTCT TTTGGCCCAA CTAAGCCTGG CCCTGGAAAA TGTCATCCAA TTCAATGCAC 121 AGCCAATATA AACGGTGAAT GCCCTGGTTC ACTTAGGGTA CCTGGAGGAT GTAACAACCC 181 TTGTACAACA TTCGGAGGAC AACAATATTG TTGTAATCAC GGGCCATGTG GTCCTACTGA 241 ATTGTCAAGA TTTTTCAAAC AAAGATGTCC TGATGCCTAT AGTTACCCTC AAGACGATCC 301 AACTAGTACT TTTACTTGTC AGAGTTGGAC TACAGACTAC AAGATAATGT TCTGTCCTTA 361 TGGCTCTACT CACAATGAAA CAACAAATTT CCCATTGGAG ATGCCTACAA GTACTCTTGA 421 AGGTGCTTAA TAAGTAGATT CATCATGAGT GTAGCCACCT CTTTCTTGTT CAAAAAGGTT 481 GAGTTTTGTT CATTACTTGT CTTTTGTATA ATACACATTT CCTTTTAGTT TGGTATCTTG 541 AGGGGGTTAA GAATTCAATA ACATATTGTA CTTTTAATTT TG Predicted gene structure (within gDNA segment 16111 to 9595): Exon 1 11793 11424 ( 370 n); cDNA 2 371 ( 370 n); score: 0.803 Intron 1 11423 10237 (1187 n); Pd: 0.000 (s: 0.64), Pa: 0.958 (s: 0) Exon 2 10236 10209 ( 28 n); cDNA 372 397 ( 26 n); score: 0.607 MATCH C08HBa0235H18.1- SGN-E308347+ 0.803 398 0.684 C PGS_C08HBa0235H18.1-_SGN-E308347+ (11793 11424,10236 10209) Alignment (genomic DNA sequence = upper lines): TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG ATTTAATATT 11734 ||| |||||| || | ||||| |||||| ||| || |||||| | ||||| ||| || || TTGAACCAGT TTGGTAACCT AGATTTTTGG GATATTTCTG GGATTGATGG ATTCAACATC 61 CCAATGACTT TCGCCCCGAC CAATCCTAGT GGAGGGAAAT GCCATGCAAT TCATTGTACG 11674 || ||| ||| | | ||| || || ||| | || |||| | ||| |||| ||| || || CCTATGTCTT TTGGCCCAAC TAAGCCTGGC CCTGGAAAAT GTCATCCAAT TCAATGCACA 121 GCTAATATAA ATGGTGAATG TCCTGGTTCA CTTAGGGTAC CCGGAGGATG TAACAATCCT 11614 || ||||||| | |||||||| ||||||||| |||||||||| | |||||||| |||||| ||| GCCAATATAA ACGGTGAATG CCCTGGTTCA CTTAGGGTAC CTGGAGGATG TAACAACCCT 181 TGTACCACGT TCGGAGGACA ACAATATTGT TGCACACAAG GTCCATGTGG CCCTACTGAT 11554 ||||| || | |||||||||| |||||||||| || | || | | |||||||| |||||||| TGTACAACAT TCGGAGGACA ACAATATTGT TGTAATCACG GGCCATGTGG TCCTACTGAA 241 TTGTCGAGAT TTTTCAAACA AAGATGTCCT GATGCGTATA GCTACCCACA AGATGATCCT 11494 ||||| |||| |||||||||| |||||||||| ||||| |||| | ||||| || ||| ||||| TTGTCAAGAT TTTTCAAACA AAGATGTCCT GATGCCTATA GTTACCCTCA AGACGATCCA 301 ACTAGCACAT TTACTTGCCC TAGTGGTAGT ACAAATTATA GGGTTGTTTT TTGTCCTAAT 11434 ||||| || | ||||||| | ||| | | | ||| | || | | | | || |||||| || ACTAGTACTT TTACTTGTCA GAGTTGGACT ACAGACTACA AGATAATGTT CTGTCCTTAT 361 GGTGTTACTA GCCCAAATTT CCCCTTGGAG ATGCCCTCAA GTGATGAAGA GGCTAAGTAA 11374 || |||| GGCTCTACTC .......... .......... .......... .......... .......... 371 AATTGAGTCA CTTTCTTTTA AATTGCTTGA AGTAGTCGAG TTATATAATT GGCTTGTAAT 11314 .......... .......... .......... .......... .......... .......... 371 AAACCTAATA TAATTACATG AATAAAAGTC ACATCATCAC AAATATGTTG TTTCGAATAT 11254 .......... .......... .......... .......... .......... .......... 371 TATTTTATGT ATATTTTGTT ATTTACGTAT TAACTTGTCA AATAAAAGAA TAATATCAGT 11194 .......... .......... .......... .......... .......... .......... 371 CAGTTTAAAA ACATAAAAAC TATAATATAC TGGATAAGAT AAATAAGAAC ATCTCACGAG 11134 .......... .......... .......... .......... .......... .......... 371 ATTATTTTAT CTCATTTTTT TATATGATAA AAGTTCCATC ACAAAATATA AAAATAAAAT 11074 .......... .......... .......... .......... .......... .......... 371 AAATTAATCT CAAAAGTAAC TAGTACCTTA AAATAATATA AAATAAAATA ATCCCATTTT 11014 .......... .......... .......... .......... .......... .......... 371 ATTAGAAATT ATTATCCACA ATTTTAGGGC AAAGTCAAAA GTAGATGGAA ATATTTGTTT 10954 .......... .......... .......... .......... .......... .......... 371 ATAGGCGGCT CTTAGAACAT TTTCAAGCTA AATGATGTTA GCTGCACGTG CTACTTGACA 10894 .......... .......... .......... .......... .......... .......... 371 CAATGCCAAA AGATTAAATT GAGCAAAATT TATATTTTTA TTAAAAAAAA TTATATTTAT 10834 .......... .......... .......... .......... .......... .......... 371 AAACGTAGAA AATTCACTAT TTTTTTTTTA TCATTAACAT GTTTTACATA TTTTAGAGGA 10774 .......... .......... .......... .......... .......... .......... 371 TTAAGAGTGA AAAAGATTCT AATAACTTGT TAACTTGATA TAATAGATTA ACAAGTTGAT 10714 .......... .......... .......... .......... .......... .......... 371 TATATCGCAC TCTAAAGAAT AAAATGAATT GTCAAAAATA ATATTAATAA TTTATCGCCA 10654 .......... .......... .......... .......... .......... .......... 371 CTCAAAAAAA TAAAAAATAT TGTAGAACGT GACTTTATCA ATACTAATCT CTTTTAAAAC 10594 .......... .......... .......... .......... .......... .......... 371 AACGATTGAT TTGAACTTCA CCGAAATTGA TGGAATGAAA TGACTAAATA TTGTATTGGG 10534 .......... .......... .......... .......... .......... .......... 371 ATAAAATAAT GGGATAATTG TATATAATAG CAAACTAATA ACCTAAAATA AATGGAGTAG 10474 .......... .......... .......... .......... .......... .......... 371 CTATGATTTG ATTTAATTGT GCACCATAGC AAACGTTAGC CAAAGTTTGT CAGTCGCCTC 10414 .......... .......... .......... .......... .......... .......... 371 TCTCTCTTTA TACACAAAAG TGTATAAATT GTGTTTCTGT TTTGTATAAG CGAGAGAAAA 10354 .......... .......... .......... .......... .......... .......... 371 CTGTATATAC ACATGCAAAA ACATATATCT TCGTGTTATA CACTTAATTA TACAATTTAC 10294 .......... .......... .......... .......... .......... .......... 371 AAATATTTTA CTTCAATTCA ATTGTAGACA AATGCAAATT TTATACAAAT ATTGCAGCGA 10234 | .......... .......... .......... .......... .......... .......ACA 374 AAAAGGCGAA CGAATTATAC AATTG 10209 | | | || | |||| | | |||| ATGAAAC-AA CAAATT-TCC CATTG 397 hqPGS_C08HBa0235H18.1-_SGN-E308347+ (11793 11424) ******************************************************************************** EST sequence 943 +strand 605 n (File: SGN-E353161+) 1 TGTTATTGAT GGATTCAACA TCCCTATGTC TTTTGGCCCA ACTAAGCCTG GCCCTGGAAA 61 ATGTCATCCA ATTCAATGCA CAGCCAATAT AAACGGTGAA TGCCCTGGTT CACTTAGGGT 121 ACCTGGAGGA TGTAACAACC CTTGTACAAC ATTCGGAGGA CAACAATATT GTTGTAATCA 181 CGGTCCATGT GGTCCTACTG AATTGTCAAG ATTTTTCAAA CAAAGATGTC CTGATGCCTA 241 TAGTTACCCT CAAGACGATC CAACTAGTAC TTTTACTTGT CAGAGTTGGA CTACAGACTA 301 CAAGATAATG TTCTGTCCTT ATGGCTCTAC TCACAATGAA ACAACAAATT TCCCATTGGA 361 GATGCCTACA AGTACTCTTG AAGTTGCTTA ATAAGTAGAT TCATCATGAG TGTAGCCACC 421 TCTTTCTTGT TCAAAATGGT TGAGTTTTGT TCATTACTTG TCTTTTGTAT TATCCACATT 481 TCTTTTAGTT TGTTATCTTG AGGTGGCTAA GATTTCAATA ACATATTGTA CTTTAATTTG 541 TCTTACACAT GATGTTCAAA ATTCTCACAC AAGAGTGCAT TTGGAGTATC GTTTAAAAAA 601 AAAAA Predicted gene structure (within gDNA segment 15721 to 8975): Exon 1 11748 11424 ( 325 n); cDNA 8 332 ( 325 n); score: 0.809 Intron 1 11423 10237 (1187 n); Pd: 0.000 (s: 0.64), Pa: 0.958 (s: 0) Exon 2 10236 10209 ( 28 n); cDNA 333 358 ( 26 n); score: 0.607 PPA cDNA 595 605 MATCH C08HBa0235H18.1- SGN-E353161+ 0.809 353 0.583 C PGS_C08HBa0235H18.1-_SGN-E353161+ (11748 11424,10236 10209) Alignment (genomic DNA sequence = upper lines): GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG GAAATGCCAT 11689 |||||||| | | || || || | |||| | | || || || | || | || ||||| ||| GATGGATTCA ACATCCCTAT GTCTTTTGGC CCAACTAAGC CTGGCCCTGG AAAATGTCAT 67 GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG GGTACCCGGA 11629 ||||||| | | || || || |||||| ||| ||||| |||| |||||||||| |||||| ||| CCAATTCAAT GCACAGCCAA TATAAACGGT GAATGCCCTG GTTCACTTAG GGTACCTGGA 127 GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT ATTGTTGCAC ACAAGGTCCA 11569 |||||||||| | |||||||| || |||||| |||||||||| ||||||| | || |||||| GGATGTAACA ACCCTTGTAC AACATTCGGA GGACAACAAT ATTGTTGTAA TCACGGTCCA 187 TGTGGCCCTA CTGATTTGTC GAGATTTTTC AAACAAAGAT GTCCTGATGC GTATAGCTAC 11509 ||||| |||| |||| ||||| ||||||||| |||||||||| |||||||||| ||||| ||| TGTGGTCCTA CTGAATTGTC AAGATTTTTC AAACAAAGAT GTCCTGATGC CTATAGTTAC 247 CCACAAGATG ATCCTACTAG CACATTTACT TGCCCTAGTG GTAGTACAAA TTATAGGGTT 11449 || ||||| | |||| ||||| || |||||| || | ||| | | |||| | || | | | CCTCAAGACG ATCCAACTAG TACTTTTACT TGTCAGAGTT GGACTACAGA CTACAAGATA 307 GTTTTTTGTC CTAATGGTGT TACTAGCCCA AATTTCCCCT TGGAGATGCC CTCAAGTGAT 11389 | || |||| || |||| |||| ATGTTCTGTC CTTATGGCTC TACTC..... .......... .......... .......... 332 GAAGAGGCTA AGTAAAATTG AGTCACTTTC TTTTAAATTG CTTGAAGTAG TCGAGTTATA 11329 .......... .......... .......... .......... .......... .......... 332 TAATTGGCTT GTAATAAACC TAATATAATT ACATGAATAA AAGTCACATC ATCACAAATA 11269 .......... .......... .......... .......... .......... .......... 332 TGTTGTTTCG AATATTATTT TATGTATATT TTGTTATTTA CGTATTAACT TGTCAAATAA 11209 .......... .......... .......... .......... .......... .......... 332 AAGAATAATA TCAGTCAGTT TAAAAACATA AAAACTATAA TATACTGGAT AAGATAAATA 11149 .......... .......... .......... .......... .......... .......... 332 AGAACATCTC ACGAGATTAT TTTATCTCAT TTTTTTATAT GATAAAAGTT CCATCACAAA 11089 .......... .......... .......... .......... .......... .......... 332 ATATAAAAAT AAAATAAATT AATCTCAAAA GTAACTAGTA CCTTAAAATA ATATAAAATA 11029 .......... .......... .......... .......... .......... .......... 332 AAATAATCCC ATTTTATTAG AAATTATTAT CCACAATTTT AGGGCAAAGT CAAAAGTAGA 10969 .......... .......... .......... .......... .......... .......... 332 TGGAAATATT TGTTTATAGG CGGCTCTTAG AACATTTTCA AGCTAAATGA TGTTAGCTGC 10909 .......... .......... .......... .......... .......... .......... 332 ACGTGCTACT TGACACAATG CCAAAAGATT AAATTGAGCA AAATTTATAT TTTTATTAAA 10849 .......... .......... .......... .......... .......... .......... 332 AAAAATTATA TTTATAAACG TAGAAAATTC ACTATTTTTT TTTTATCATT AACATGTTTT 10789 .......... .......... .......... .......... .......... .......... 332 ACATATTTTA GAGGATTAAG AGTGAAAAAG ATTCTAATAA CTTGTTAACT TGATATAATA 10729 .......... .......... .......... .......... .......... .......... 332 GATTAACAAG TTGATTATAT CGCACTCTAA AGAATAAAAT GAATTGTCAA AAATAATATT 10669 .......... .......... .......... .......... .......... .......... 332 AATAATTTAT CGCCACTCAA AAAAATAAAA AATATTGTAG AACGTGACTT TATCAATACT 10609 .......... .......... .......... .......... .......... .......... 332 AATCTCTTTT AAAACAACGA TTGATTTGAA CTTCACCGAA ATTGATGGAA TGAAATGACT 10549 .......... .......... .......... .......... .......... .......... 332 AAATATTGTA TTGGGATAAA ATAATGGGAT AATTGTATAT AATAGCAAAC TAATAACCTA 10489 .......... .......... .......... .......... .......... .......... 332 AAATAAATGG AGTAGCTATG ATTTGATTTA ATTGTGCACC ATAGCAAACG TTAGCCAAAG 10429 .......... .......... .......... .......... .......... .......... 332 TTTGTCAGTC GCCTCTCTCT CTTTATACAC AAAAGTGTAT AAATTGTGTT TCTGTTTTGT 10369 .......... .......... .......... .......... .......... .......... 332 ATAAGCGAGA GAAAACTGTA TATACACATG CAAAAACATA TATCTTCGTG TTATACACTT 10309 .......... .......... .......... .......... .......... .......... 332 AATTATACAA TTTACAAATA TTTTACTTCA ATTCAATTGT AGACAAATGC AAATTTTATA 10249 .......... .......... .......... .......... .......... .......... 332 CAAATATTGC AGCGAAAAAG GCGAACGAAT TATACAATTG 10209 || | | ||| ||| | | | |||| .......... ..ACAATGAA AC-AACAAAT T-TCCCATTG 358 hqPGS_C08HBa0235H18.1-_SGN-E353161+ (11748 11424) ******************************************************************************** EST sequence 1045 +strand 598 n (File: SGN-E354792+) 1 TGTTATTGAT GGATTCAACA TCCCTATGTC TTTTGGCCCA ACTAAGCCTG GCCCTGGAAA 61 ATGTCATCCA ATTCAATGCA CAGCCAATAT AAACGGTGAA TGCCCTGGTT CACTTAGGGT 121 ACCTGGAGGA TGTAACAACC CTTGTACAAC ATTCGGAGGA CAACAATATT GTTGTAATCA 181 CGGTCCATGT GGTCCTACTG AATTGTCAAG ATTTTTCAAA CAAAGATGTC CTGATGCCTA 241 TAGTTACCCT CAAGACGATC CAACTAGTAC TTTTACTTGT CAGAGTTGGA CTACAGACTA 301 CAAGATAATG TTCTGTCCTT ATGGCTCTAC TCACAATGAA ACAACAAATT TCCCATTGGA 361 GATGCCTACA AGTACTCTTG AAGTTGCTTA ATAAGTAGAT TCATCATGAG TGTAGCCACC 421 TCTTTCTTGT TCAAAATGGT TGAGTTTTGT TCATTACTTG TCTTTTGTAT TATCCACATT 481 TCTTTTAGTT TGTTATCTTG AGGTGGCTAA GATTTCAATA ACATATTGTA CTTTAATTTG 541 TCTTACACAT GATGTTCAAA ATTCTCACAC AAGAGTGCAT TTGGAGTAAA AAAAAAAA Predicted gene structure (within gDNA segment 15721 to 9045): Exon 1 11748 11424 ( 325 n); cDNA 8 332 ( 325 n); score: 0.809 Intron 1 11423 10237 (1187 n); Pd: 0.000 (s: 0.64), Pa: 0.958 (s: 0) Exon 2 10236 10209 ( 28 n); cDNA 333 358 ( 26 n); score: 0.607 PPA cDNA 588 598 MATCH C08HBa0235H18.1- SGN-E354792+ 0.809 353 0.590 C PGS_C08HBa0235H18.1-_SGN-E354792+ (11748 11424,10236 10209) Alignment (genomic DNA sequence = upper lines): GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG GAAATGCCAT 11689 |||||||| | | || || || | |||| | | || || || | || | || ||||| ||| GATGGATTCA ACATCCCTAT GTCTTTTGGC CCAACTAAGC CTGGCCCTGG AAAATGTCAT 67 GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG GGTACCCGGA 11629 ||||||| | | || || || |||||| ||| ||||| |||| |||||||||| |||||| ||| CCAATTCAAT GCACAGCCAA TATAAACGGT GAATGCCCTG GTTCACTTAG GGTACCTGGA 127 GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT ATTGTTGCAC ACAAGGTCCA 11569 |||||||||| | |||||||| || |||||| |||||||||| ||||||| | || |||||| GGATGTAACA ACCCTTGTAC AACATTCGGA GGACAACAAT ATTGTTGTAA TCACGGTCCA 187 TGTGGCCCTA CTGATTTGTC GAGATTTTTC AAACAAAGAT GTCCTGATGC GTATAGCTAC 11509 ||||| |||| |||| ||||| ||||||||| |||||||||| |||||||||| ||||| ||| TGTGGTCCTA CTGAATTGTC AAGATTTTTC AAACAAAGAT GTCCTGATGC CTATAGTTAC 247 CCACAAGATG ATCCTACTAG CACATTTACT TGCCCTAGTG GTAGTACAAA TTATAGGGTT 11449 || ||||| | |||| ||||| || |||||| || | ||| | | |||| | || | | | CCTCAAGACG ATCCAACTAG TACTTTTACT TGTCAGAGTT GGACTACAGA CTACAAGATA 307 GTTTTTTGTC CTAATGGTGT TACTAGCCCA AATTTCCCCT TGGAGATGCC CTCAAGTGAT 11389 | || |||| || |||| |||| ATGTTCTGTC CTTATGGCTC TACTC..... .......... .......... .......... 332 GAAGAGGCTA AGTAAAATTG AGTCACTTTC TTTTAAATTG CTTGAAGTAG TCGAGTTATA 11329 .......... .......... .......... .......... .......... .......... 332 TAATTGGCTT GTAATAAACC TAATATAATT ACATGAATAA AAGTCACATC ATCACAAATA 11269 .......... .......... .......... .......... .......... .......... 332 TGTTGTTTCG AATATTATTT TATGTATATT TTGTTATTTA CGTATTAACT TGTCAAATAA 11209 .......... .......... .......... .......... .......... .......... 332 AAGAATAATA TCAGTCAGTT TAAAAACATA AAAACTATAA TATACTGGAT AAGATAAATA 11149 .......... .......... .......... .......... .......... .......... 332 AGAACATCTC ACGAGATTAT TTTATCTCAT TTTTTTATAT GATAAAAGTT CCATCACAAA 11089 .......... .......... .......... .......... .......... .......... 332 ATATAAAAAT AAAATAAATT AATCTCAAAA GTAACTAGTA CCTTAAAATA ATATAAAATA 11029 .......... .......... .......... .......... .......... .......... 332 AAATAATCCC ATTTTATTAG AAATTATTAT CCACAATTTT AGGGCAAAGT CAAAAGTAGA 10969 .......... .......... .......... .......... .......... .......... 332 TGGAAATATT TGTTTATAGG CGGCTCTTAG AACATTTTCA AGCTAAATGA TGTTAGCTGC 10909 .......... .......... .......... .......... .......... .......... 332 ACGTGCTACT TGACACAATG CCAAAAGATT AAATTGAGCA AAATTTATAT TTTTATTAAA 10849 .......... .......... .......... .......... .......... .......... 332 AAAAATTATA TTTATAAACG TAGAAAATTC ACTATTTTTT TTTTATCATT AACATGTTTT 10789 .......... .......... .......... .......... .......... .......... 332 ACATATTTTA GAGGATTAAG AGTGAAAAAG ATTCTAATAA CTTGTTAACT TGATATAATA 10729 .......... .......... .......... .......... .......... .......... 332 GATTAACAAG TTGATTATAT CGCACTCTAA AGAATAAAAT GAATTGTCAA AAATAATATT 10669 .......... .......... .......... .......... .......... .......... 332 AATAATTTAT CGCCACTCAA AAAAATAAAA AATATTGTAG AACGTGACTT TATCAATACT 10609 .......... .......... .......... .......... .......... .......... 332 AATCTCTTTT AAAACAACGA TTGATTTGAA CTTCACCGAA ATTGATGGAA TGAAATGACT 10549 .......... .......... .......... .......... .......... .......... 332 AAATATTGTA TTGGGATAAA ATAATGGGAT AATTGTATAT AATAGCAAAC TAATAACCTA 10489 .......... .......... .......... .......... .......... .......... 332 AAATAAATGG AGTAGCTATG ATTTGATTTA ATTGTGCACC ATAGCAAACG TTAGCCAAAG 10429 .......... .......... .......... .......... .......... .......... 332 TTTGTCAGTC GCCTCTCTCT CTTTATACAC AAAAGTGTAT AAATTGTGTT TCTGTTTTGT 10369 .......... .......... .......... .......... .......... .......... 332 ATAAGCGAGA GAAAACTGTA TATACACATG CAAAAACATA TATCTTCGTG TTATACACTT 10309 .......... .......... .......... .......... .......... .......... 332 AATTATACAA TTTACAAATA TTTTACTTCA ATTCAATTGT AGACAAATGC AAATTTTATA 10249 .......... .......... .......... .......... .......... .......... 332 CAAATATTGC AGCGAAAAAG GCGAACGAAT TATACAATTG 10209 || | | ||| ||| | | | |||| .......... ..ACAATGAA AC-AACAAAT T-TCCCATTG 358 hqPGS_C08HBa0235H18.1-_SGN-E354792+ (11748 11424) ******************************************************************************** EST sequence 277 -strand 513 n (File: SGN-E206137-) 1 GTCATCCAAT TCAATGCACA GCCAATATAA ACGGTGAATG CCCTGGTTCA CTTAGGGTAC 61 CTGGAGGATG TAACAACCCT TGTACAACAT TCGGAGGACA ACAATATTGT TGTAATCACG 121 GTCCATGTGG TCCTACTGAA TTGTCAAGAT TTTTCAAACA AAGATGTCCT GATGCCTATA 181 GTTACCCTCA AGACGATCCA ACTAGTACTT TTACTTGTCA GAGTTGGACT ACAGACTACA 241 AGATAATGTT CTGTCCTTAT GGCTCTACTC ACAATGAAAC AACAAATTTC CCATTGGAGA 301 TGCCTACAAG TACTCTTGAA GTTGCTTAAT AAGTAGATTC ATCATGAGTG TAGCCACCTC 361 TTTCTTGTTC AAAATGGTTG AGTTTTGTTC ATTACTTGTC TTTTGTATTA TCCACATTTC 421 TTTTAGTTTG TTATCTTGAG GTGGCTAAGA TTTCAATAAC ATATTGTACT TTAATTTGTC 481 TTACACATGA TGTTCAAAAT TCTCACAAAA AAA Predicted gene structure (within gDNA segment 15111 to 9285): Exon 1 11691 11424 ( 268 n); cDNA 3 270 ( 268 n); score: 0.832 Intron 1 11423 10237 (1187 n); Pd: 0.000 (s: 0.64), Pa: 0.958 (s: 0) Exon 2 10236 10209 ( 28 n); cDNA 271 296 ( 26 n); score: 0.607 MATCH C08HBa0235H18.1- SGN-E206137- 0.832 296 0.577 C PGS_C08HBa0235H18.1-_SGN-E206137- (11691 11424,10236 10209) Alignment (genomic DNA sequence = upper lines): CATGCAATTC ATTGTACGGC TAATATAAAT GGTGAATGTC CTGGTTCACT TAGGGTACCC 11632 ||| |||||| | || || || |||||||| |||||||| | |||||||||| ||||||||| CATCCAATTC AATGCACAGC CAATATAAAC GGTGAATGCC CTGGTTCACT TAGGGTACCT 62 GGAGGATGTA ACAATCCTTG TACCACGTTC GGAGGACAAC AATATTGTTG CACACAAGGT 11572 |||||||||| |||| ||||| ||| || ||| |||||||||| |||||||||| | || ||| GGAGGATGTA ACAACCCTTG TACAACATTC GGAGGACAAC AATATTGTTG TAATCACGGT 122 CCATGTGGCC CTACTGATTT GTCGAGATTT TTCAAACAAA GATGTCCTGA TGCGTATAGC 11512 |||||||| | ||||||| || ||| |||||| |||||||||| |||||||||| ||| ||||| CCATGTGGTC CTACTGAATT GTCAAGATTT TTCAAACAAA GATGTCCTGA TGCCTATAGT 182 TACCCACAAG ATGATCCTAC TAGCACATTT ACTTGCCCTA GTGGTAGTAC AAATTATAGG 11452 ||||| |||| | ||||| || ||| || ||| ||||| | | || | | ||| | | || | | TACCCTCAAG ACGATCCAAC TAGTACTTTT ACTTGTCAGA GTTGGACTAC AGACTACAAG 242 GTTGTTTTTT GTCCTAATGG TGTTACTAGC CCAAATTTCC CCTTGGAGAT GCCCTCAAGT 11392 | | || | ||||| |||| |||| ATAATGTTCT GTCCTTATGG CTCTACTC.. .......... .......... .......... 270 GATGAAGAGG CTAAGTAAAA TTGAGTCACT TTCTTTTAAA TTGCTTGAAG TAGTCGAGTT 11332 .......... .......... .......... .......... .......... .......... 270 ATATAATTGG CTTGTAATAA ACCTAATATA ATTACATGAA TAAAAGTCAC ATCATCACAA 11272 .......... .......... .......... .......... .......... .......... 270 ATATGTTGTT TCGAATATTA TTTTATGTAT ATTTTGTTAT TTACGTATTA ACTTGTCAAA 11212 .......... .......... .......... .......... .......... .......... 270 TAAAAGAATA ATATCAGTCA GTTTAAAAAC ATAAAAACTA TAATATACTG GATAAGATAA 11152 .......... .......... .......... .......... .......... .......... 270 ATAAGAACAT CTCACGAGAT TATTTTATCT CATTTTTTTA TATGATAAAA GTTCCATCAC 11092 .......... .......... .......... .......... .......... .......... 270 AAAATATAAA AATAAAATAA ATTAATCTCA AAAGTAACTA GTACCTTAAA ATAATATAAA 11032 .......... .......... .......... .......... .......... .......... 270 ATAAAATAAT CCCATTTTAT TAGAAATTAT TATCCACAAT TTTAGGGCAA AGTCAAAAGT 10972 .......... .......... .......... .......... .......... .......... 270 AGATGGAAAT ATTTGTTTAT AGGCGGCTCT TAGAACATTT TCAAGCTAAA TGATGTTAGC 10912 .......... .......... .......... .......... .......... .......... 270 TGCACGTGCT ACTTGACACA ATGCCAAAAG ATTAAATTGA GCAAAATTTA TATTTTTATT 10852 .......... .......... .......... .......... .......... .......... 270 AAAAAAAATT ATATTTATAA ACGTAGAAAA TTCACTATTT TTTTTTTATC ATTAACATGT 10792 .......... .......... .......... .......... .......... .......... 270 TTTACATATT TTAGAGGATT AAGAGTGAAA AAGATTCTAA TAACTTGTTA ACTTGATATA 10732 .......... .......... .......... .......... .......... .......... 270 ATAGATTAAC AAGTTGATTA TATCGCACTC TAAAGAATAA AATGAATTGT CAAAAATAAT 10672 .......... .......... .......... .......... .......... .......... 270 ATTAATAATT TATCGCCACT CAAAAAAATA AAAAATATTG TAGAACGTGA CTTTATCAAT 10612 .......... .......... .......... .......... .......... .......... 270 ACTAATCTCT TTTAAAACAA CGATTGATTT GAACTTCACC GAAATTGATG GAATGAAATG 10552 .......... .......... .......... .......... .......... .......... 270 ACTAAATATT GTATTGGGAT AAAATAATGG GATAATTGTA TATAATAGCA AACTAATAAC 10492 .......... .......... .......... .......... .......... .......... 270 CTAAAATAAA TGGAGTAGCT ATGATTTGAT TTAATTGTGC ACCATAGCAA ACGTTAGCCA 10432 .......... .......... .......... .......... .......... .......... 270 AAGTTTGTCA GTCGCCTCTC TCTCTTTATA CACAAAAGTG TATAAATTGT GTTTCTGTTT 10372 .......... .......... .......... .......... .......... .......... 270 TGTATAAGCG AGAGAAAACT GTATATACAC ATGCAAAAAC ATATATCTTC GTGTTATACA 10312 .......... .......... .......... .......... .......... .......... 270 CTTAATTATA CAATTTACAA ATATTTTACT TCAATTCAAT TGTAGACAAA TGCAAATTTT 10252 .......... .......... .......... .......... .......... .......... 270 ATACAAATAT TGCAGCGAAA AAGGCGAACG AATTATACAA TTG 10209 || | | ||| |||| | | | ||| .......... .....ACAAT GAAAC-AACA AATT-TCCCA TTG 296 hqPGS_C08HBa0235H18.1-_SGN-E206137- (11691 11424) ******************************************************************************** EST sequence 543 +strand 537 n (File: SGN-E351855+) 1 ATCCAATTCA ATGCACAGCC AATATAAACG GTGAATGCCC TGGTTCACTT AGGGTACCTG 61 GAGGATGTAA CAACCCTTGT ACAACATTCG GAGGACAACA ATATTGTTGT AATCACGGTC 121 CATGTGGTCC TACTGAATTG TCAAGATTTT TCAAACAAAG ATGTCCTGAT GCCTATAGTT 181 ACCCTCAAGA CGATCCAACT AGTACTTTTA CTTGTCAGAG TTGGACTACA GACTACAAGA 241 TAATGTTCTG TCCTTATGGC TCTACTCACA ATGAAACAAC AAATTTCCCA TTGGAGATGC 301 CTACAAGTAC TCTTGAAGTT GCTTAATAAG TAGATTCATC ATGAGTGTAG CCACCTCTTT 361 CTTGTTCAAA ATGGTTGAGT TTTGTTCATT ACTTGTCTTT TGTATTATCC ACATTTCTTT 421 TAGTTTGTTA TCTTGAGGTG GCTAAGATTT CAATAACATA TTGTACTTTA ATTTGTCTTA 481 CACATGATGT TCAAAATTCT CACACAAGAG TGCATTTGGA GTAAAAAAAA AAAAAAA Predicted gene structure (within gDNA segment 15071 to 9005): Exon 1 11690 11424 ( 267 n); cDNA 1 267 ( 267 n); score: 0.831 Intron 1 11423 10237 (1187 n); Pd: 0.000 (s: 0.64), Pa: 0.958 (s: 0) Exon 2 10236 10209 ( 28 n); cDNA 268 293 ( 26 n); score: 0.607 PPA cDNA 523 537 MATCH C08HBa0235H18.1- SGN-E351855+ 0.831 295 0.549 C PGS_C08HBa0235H18.1-_SGN-E351855+ (11690 11424,10236 10209) Alignment (genomic DNA sequence = upper lines): ATGCAATTCA TTGTACGGCT AATATAAATG GTGAATGTCC TGGTTCACTT AGGGTACCCG 11631 || ||||||| || || || |||||||| | ||||||| || |||||||||| |||||||| | ATCCAATTCA ATGCACAGCC AATATAAACG GTGAATGCCC TGGTTCACTT AGGGTACCTG 60 GAGGATGTAA CAATCCTTGT ACCACGTTCG GAGGACAACA ATATTGTTGC ACACAAGGTC 11571 |||||||||| ||| |||||| || || |||| |||||||||| ||||||||| | || |||| GAGGATGTAA CAACCCTTGT ACAACATTCG GAGGACAACA ATATTGTTGT AATCACGGTC 120 CATGTGGCCC TACTGATTTG TCGAGATTTT TCAAACAAAG ATGTCCTGAT GCGTATAGCT 11511 ||||||| || |||||| ||| || ||||||| |||||||||| |||||||||| || ||||| | CATGTGGTCC TACTGAATTG TCAAGATTTT TCAAACAAAG ATGTCCTGAT GCCTATAGTT 180 ACCCACAAGA TGATCCTACT AGCACATTTA CTTGCCCTAG TGGTAGTACA AATTATAGGG 11451 |||| ||||| ||||| ||| || || |||| |||| | || | | | |||| | || | | ACCCTCAAGA CGATCCAACT AGTACTTTTA CTTGTCAGAG TTGGACTACA GACTACAAGA 240 TTGTTTTTTG TCCTAATGGT GTTACTAGCC CAAATTTCCC CTTGGAGATG CCCTCAAGTG 11391 | | || || |||| |||| |||| TAATGTTCTG TCCTTATGGC TCTACTC... .......... .......... .......... 267 ATGAAGAGGC TAAGTAAAAT TGAGTCACTT TCTTTTAAAT TGCTTGAAGT AGTCGAGTTA 11331 .......... .......... .......... .......... .......... .......... 267 TATAATTGGC TTGTAATAAA CCTAATATAA TTACATGAAT AAAAGTCACA TCATCACAAA 11271 .......... .......... .......... .......... .......... .......... 267 TATGTTGTTT CGAATATTAT TTTATGTATA TTTTGTTATT TACGTATTAA CTTGTCAAAT 11211 .......... .......... .......... .......... .......... .......... 267 AAAAGAATAA TATCAGTCAG TTTAAAAACA TAAAAACTAT AATATACTGG ATAAGATAAA 11151 .......... .......... .......... .......... .......... .......... 267 TAAGAACATC TCACGAGATT ATTTTATCTC ATTTTTTTAT ATGATAAAAG TTCCATCACA 11091 .......... .......... .......... .......... .......... .......... 267 AAATATAAAA ATAAAATAAA TTAATCTCAA AAGTAACTAG TACCTTAAAA TAATATAAAA 11031 .......... .......... .......... .......... .......... .......... 267 TAAAATAATC CCATTTTATT AGAAATTATT ATCCACAATT TTAGGGCAAA GTCAAAAGTA 10971 .......... .......... .......... .......... .......... .......... 267 GATGGAAATA TTTGTTTATA GGCGGCTCTT AGAACATTTT CAAGCTAAAT GATGTTAGCT 10911 .......... .......... .......... .......... .......... .......... 267 GCACGTGCTA CTTGACACAA TGCCAAAAGA TTAAATTGAG CAAAATTTAT ATTTTTATTA 10851 .......... .......... .......... .......... .......... .......... 267 AAAAAAATTA TATTTATAAA CGTAGAAAAT TCACTATTTT TTTTTTATCA TTAACATGTT 10791 .......... .......... .......... .......... .......... .......... 267 TTACATATTT TAGAGGATTA AGAGTGAAAA AGATTCTAAT AACTTGTTAA CTTGATATAA 10731 .......... .......... .......... .......... .......... .......... 267 TAGATTAACA AGTTGATTAT ATCGCACTCT AAAGAATAAA ATGAATTGTC AAAAATAATA 10671 .......... .......... .......... .......... .......... .......... 267 TTAATAATTT ATCGCCACTC AAAAAAATAA AAAATATTGT AGAACGTGAC TTTATCAATA 10611 .......... .......... .......... .......... .......... .......... 267 CTAATCTCTT TTAAAACAAC GATTGATTTG AACTTCACCG AAATTGATGG AATGAAATGA 10551 .......... .......... .......... .......... .......... .......... 267 CTAAATATTG TATTGGGATA AAATAATGGG ATAATTGTAT ATAATAGCAA ACTAATAACC 10491 .......... .......... .......... .......... .......... .......... 267 TAAAATAAAT GGAGTAGCTA TGATTTGATT TAATTGTGCA CCATAGCAAA CGTTAGCCAA 10431 .......... .......... .......... .......... .......... .......... 267 AGTTTGTCAG TCGCCTCTCT CTCTTTATAC ACAAAAGTGT ATAAATTGTG TTTCTGTTTT 10371 .......... .......... .......... .......... .......... .......... 267 GTATAAGCGA GAGAAAACTG TATATACACA TGCAAAAACA TATATCTTCG TGTTATACAC 10311 .......... .......... .......... .......... .......... .......... 267 TTAATTATAC AATTTACAAA TATTTTACTT CAATTCAATT GTAGACAAAT GCAAATTTTA 10251 .......... .......... .......... .......... .......... .......... 267 TACAAATATT GCAGCGAAAA AGGCGAACGA ATTATACAAT TG 10209 || | | ||| | ||| | | || || .......... ....ACAATG AAAC-AACAA ATT-TCCCAT TG 293 hqPGS_C08HBa0235H18.1-_SGN-E351855+ (11690 11424) ******************************************************************************** EST sequence 483 +strand 537 n (File: SGN-E351304+) 1 TTCAATGCAC AGCCAATATA AACGGTGAAT GCCCTGGTTC ACTTAGGGTA CCTGGAGGAT 61 GTAACAACCC TTGTACAACA TTCGGAGGAC AACAATATTG TTGTAATCAC GGTCCATGTG 121 GTCCTACTGA ATTGTCAAGA TTTTTCAAAC AAAGATGTCC TGATGCCTAT AGTTACCCTC 181 AAGACGATCC AACTAGTACT TTTACTTGTC AGAGTTGGAC TACAGACTAC AAGATAATGT 241 TCTGTCCTTA TGGCTCTACT CACAATGAAA CAACAAATTT CCCATTGGAG ATGCCTACAA 301 GTACTCTTGA AGTTGCTTAA TAAGTAGATT CATCATGAGT GTAGCCACCT CTTTCTTGTT 361 CAAAATGGTT GAGTTTTGTT CATTACTTGT CTTTTGTATT ATCCACATTT CTTTTAGTTT 421 GTTATCTTGA GGTGGCTAAG ATTTCAATAA CATATTGTAC TTTAATTTGT CTTACACATG 481 ATGTTCAAAA TTCTCACACA AGAGTGCATT TGGAGTATCG TTTAAAAAAA AAAAAAA Predicted gene structure (within gDNA segment 15011 to 8945): Exon 1 11684 11424 ( 261 n); cDNA 1 261 ( 261 n); score: 0.831 Intron 1 11423 10237 (1187 n); Pd: 0.000 (s: 0.64), Pa: 0.958 (s: 0) Exon 2 10236 10209 ( 28 n); cDNA 262 287 ( 26 n); score: 0.607 PPA cDNA 524 537 MATCH C08HBa0235H18.1- SGN-E351304+ 0.831 289 0.538 C PGS_C08HBa0235H18.1-_SGN-E351304+ (11684 11424,10236 10209) Alignment (genomic DNA sequence = upper lines): TTCATTGTAC GGCTAATATA AATGGTGAAT GTCCTGGTTC ACTTAGGGTA CCCGGAGGAT 11625 |||| || || || |||||| || ||||||| | |||||||| |||||||||| || ||||||| TTCAATGCAC AGCCAATATA AACGGTGAAT GCCCTGGTTC ACTTAGGGTA CCTGGAGGAT 60 GTAACAATCC TTGTACCACG TTCGGAGGAC AACAATATTG TTGCACACAA GGTCCATGTG 11565 ||||||| || |||||| || |||||||||| |||||||||| ||| | || |||||||||| GTAACAACCC TTGTACAACA TTCGGAGGAC AACAATATTG TTGTAATCAC GGTCCATGTG 120 GCCCTACTGA TTTGTCGAGA TTTTTCAAAC AAAGATGTCC TGATGCGTAT AGCTACCCAC 11505 | |||||||| ||||| ||| |||||||||| |||||||||| |||||| ||| || ||||| | GTCCTACTGA ATTGTCAAGA TTTTTCAAAC AAAGATGTCC TGATGCCTAT AGTTACCCTC 180 AAGATGATCC TACTAGCACA TTTACTTGCC CTAGTGGTAG TACAAATTAT AGGGTTGTTT 11445 |||| ||||| ||||| || |||||||| | ||| | | |||| | || | | | | | AAGACGATCC AACTAGTACT TTTACTTGTC AGAGTTGGAC TACAGACTAC AAGATAATGT 240 TTTGTCCTAA TGGTGTTACT AGCCCAAATT TCCCCTTGGA GATGCCCTCA AGTGATGAAG 11385 | |||||| | ||| |||| TCTGTCCTTA TGGCTCTACT C......... .......... .......... .......... 261 AGGCTAAGTA AAATTGAGTC ACTTTCTTTT AAATTGCTTG AAGTAGTCGA GTTATATAAT 11325 .......... .......... .......... .......... .......... .......... 261 TGGCTTGTAA TAAACCTAAT ATAATTACAT GAATAAAAGT CACATCATCA CAAATATGTT 11265 .......... .......... .......... .......... .......... .......... 261 GTTTCGAATA TTATTTTATG TATATTTTGT TATTTACGTA TTAACTTGTC AAATAAAAGA 11205 .......... .......... .......... .......... .......... .......... 261 ATAATATCAG TCAGTTTAAA AACATAAAAA CTATAATATA CTGGATAAGA TAAATAAGAA 11145 .......... .......... .......... .......... .......... .......... 261 CATCTCACGA GATTATTTTA TCTCATTTTT TTATATGATA AAAGTTCCAT CACAAAATAT 11085 .......... .......... .......... .......... .......... .......... 261 AAAAATAAAA TAAATTAATC TCAAAAGTAA CTAGTACCTT AAAATAATAT AAAATAAAAT 11025 .......... .......... .......... .......... .......... .......... 261 AATCCCATTT TATTAGAAAT TATTATCCAC AATTTTAGGG CAAAGTCAAA AGTAGATGGA 10965 .......... .......... .......... .......... .......... .......... 261 AATATTTGTT TATAGGCGGC TCTTAGAACA TTTTCAAGCT AAATGATGTT AGCTGCACGT 10905 .......... .......... .......... .......... .......... .......... 261 GCTACTTGAC ACAATGCCAA AAGATTAAAT TGAGCAAAAT TTATATTTTT ATTAAAAAAA 10845 .......... .......... .......... .......... .......... .......... 261 ATTATATTTA TAAACGTAGA AAATTCACTA TTTTTTTTTT ATCATTAACA TGTTTTACAT 10785 .......... .......... .......... .......... .......... .......... 261 ATTTTAGAGG ATTAAGAGTG AAAAAGATTC TAATAACTTG TTAACTTGAT ATAATAGATT 10725 .......... .......... .......... .......... .......... .......... 261 AACAAGTTGA TTATATCGCA CTCTAAAGAA TAAAATGAAT TGTCAAAAAT AATATTAATA 10665 .......... .......... .......... .......... .......... .......... 261 ATTTATCGCC ACTCAAAAAA ATAAAAAATA TTGTAGAACG TGACTTTATC AATACTAATC 10605 .......... .......... .......... .......... .......... .......... 261 TCTTTTAAAA CAACGATTGA TTTGAACTTC ACCGAAATTG ATGGAATGAA ATGACTAAAT 10545 .......... .......... .......... .......... .......... .......... 261 ATTGTATTGG GATAAAATAA TGGGATAATT GTATATAATA GCAAACTAAT AACCTAAAAT 10485 .......... .......... .......... .......... .......... .......... 261 AAATGGAGTA GCTATGATTT GATTTAATTG TGCACCATAG CAAACGTTAG CCAAAGTTTG 10425 .......... .......... .......... .......... .......... .......... 261 TCAGTCGCCT CTCTCTCTTT ATACACAAAA GTGTATAAAT TGTGTTTCTG TTTTGTATAA 10365 .......... .......... .......... .......... .......... .......... 261 GCGAGAGAAA ACTGTATATA CACATGCAAA AACATATATC TTCGTGTTAT ACACTTAATT 10305 .......... .......... .......... .......... .......... .......... 261 ATACAATTTA CAAATATTTT ACTTCAATTC AATTGTAGAC AAATGCAAAT TTTATACAAA 10245 .......... .......... .......... .......... .......... .......... 261 TATTGCAGCG AAAAAGGCGA ACGAATTATA CAATTG 10209 || | | | || |||| | | |||| ........AC AATGAAAC-A ACAAATT-TC CCATTG 287 hqPGS_C08HBa0235H18.1-_SGN-E351304+ (11684 11424) ******************************************************************************** EST sequence 621 +strand 683 n (File: SGN-E212433+) 1 TGACATCTTC TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 61 TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 121 GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 181 CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 241 CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 301 CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG 361 GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 421 TTCATTGCAC GGCCAATATA AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT 481 GTAACAACCC TTGTACCACG TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG 541 GCCCTACAGA GTTGTCCAAA TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC 601 AAGACGATCC TACAAGCACA TTTACTTGCC CTGGTGGTAG TACAAACTAT AGGGNTGTCT 661 TTTGTCCTAA TGGTGTTGCT GAT Predicted gene structure (within gDNA segment 13694 to 10353): Exon 1 12104 11425 ( 680 n); cDNA 1 680 ( 680 n); score: 0.901 MATCH C08HBa0235H18.1- SGN-E212433+ 0.901 680 0.996 C PGS_C08HBa0235H18.1-_SGN-E212433+ (12104 11425) Alignment (genomic DNA sequence = upper lines): TGAGATCTTC TTTTGTTTTC TTCCTTCTTG CTTTTGTGAC TTACACTTAT GCTGCCACTT 12045 ||| |||||| ||||||| || ||| | ||| || |||||| ||| |||||| ||||||||| TGACATCTTC TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 60 TCGAGGTACG CAACAACTGT CCATACACCG TCTGGGCGGC GTCGACCCCA ATAGGCGGTG 11985 | |||||||| |||||||||| |||||||||| | |||||||| ||||| || |||||||||| TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 120 GTCGACGTCT TGATCGAGGC CAAACATGGG TCATCAATGC ACCGAGGGGC ACTAAGATGG 11925 |||||||||| |||||||| |||||||||| |||||||||| |||||||| |||||||||| GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 180 CACGTATATG GGGTCGTACG AATTGCAACT TTGATGGTGC TGGTAGAGGT TCATGTCAGA 11865 |||||||||| ||||||||| |||||||| || ||| ||| || |||||| ||||||||| CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 240 CTGGTGATTG TGGTGGGGTC TTGCAATGTA CCGGGTGGGG CAAACCACCA AACACCCTGG 11805 |||||||||| |||||| ||| || || |||| |||| ||||| |||||| ||| |||||||| | CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 300 CCGAGTACGC CTTGGACCAG TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG 11745 |||||||||| |||||||||| ||||||||| ||||||| || |||||||||| |||||||||| CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG 360 GATTTAATAT TCCAATGACT TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA 11685 |||||||||| |||||||||| || ||||| | | || ||||| |||||| ||| || || |||| GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 420 TTCATTGTAC GGCTAATATA AATGGTGAAT GTCCTGGTTC ACTTAGGGTA CCCGGAGGAT 11625 ||||||| || ||| |||||| |||||||||| ||||| | | |||| |||| || ||||||| TTCATTGCAC GGCCAATATA AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT 480 GTAACAATCC TTGTACCACG TTCGGAGGAC AACAATATTG TTGCACACAA GGTCCATGTG 11565 ||||||| || |||||||||| || ||||||| |||||||||| |||||| ||| |||||||||| GTAACAACCC TTGTACCACG TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG 540 GCCCTACTGA TTTGTCGAGA TTTTTCAAAC AAAGATGTCC TGATGCGTAT AGCTACCCAC 11505 ||||||| || ||||| | | |||||||| |||||||||| ||||| ||| |||||||||| GCCCTACAGA GTTGTCCAAA TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC 600 AAGATGATCC TACTAGCACA TTTACTTGCC CTAGTGGTAG TACAAATTAT AGGGTTGTTT 11445 |||| ||||| ||| |||||| |||||||||| || ||||||| |||||| ||| |||| ||| | AAGACGATCC TACAAGCACA TTTACTTGCC CTGGTGGTAG TACAAACTAT AGGGNTGTCT 660 TTTGTCCTAA TGGTGTTACT 11425 |||||||||| ||||||| || TTTGTCCTAA TGGTGTTGCT 680 hqPGS_C08HBa0235H18.1-_SGN-E212433+ (12104 11425) ******************************************************************************** EST sequence 931 +strand 748 n (File: SGN-E542649+) 1 ATTTGAGGTC CATAACAACT GCCCCTACAC CGTTTGGGCG GCAGCGGTCC CCGTAGGAGG 61 TGGTCGACGT CTCGAGAGAG GTCAGAGTTG GTGGTTTTGG GCCCCACCTG GCACTAAAAT 121 GGCACGTATT TGGGGTCGTA CTAATTGCAA CTTTGATGGT GCTGGAAGAG GTTGGTGCCA 181 GACTGGTGAT TGTGGTGGAG TCCTGGATTG CAAAGGATGG GGTAAACCAC CAAACACCTT 241 AGCTGAATAC GCTTTGAACC AGTTTGGTAA CCTAGATTTT TGGGATATTT CTGTTATTGA 301 TGGATTCAAC ATCCCTATGT CTTTTGGCCC AACTAAGCCT GGCCCTGGAA AATGTCATCC 361 AATTCAATGC ACAGCCAATA TAAACGGTGA ATGCCCTGGT TCACTTAGGG TACCTGGAGG 421 ATGTAACAAC CCTTGTACAA CATTCGGAGG ACAACAATAT TGTTGTAATC ACGGTCCATG 481 TGGTCCTACT GAATTGTCAA GATTTTTCAA ACAAAGATGT CCTGATGCCT ATAGTTACCC 541 TCAAGACGAT CCAACTAGTA CTTTTACTTG TCAGAGTTGG ACTACAGACT ACAAGATAAT 601 GTTCTGTCCT TATGGCTCTA CTCACAATGA AACAACAAAT TTCCCATTGG AGATGCCTAC 661 AAGTACTCTT GAAGTTGCTT AATAAGTAGA TTCATCATGA GTGTAGCCAC CTCTTTCTTG 721 TTCAAAATGG TTGAGTTTTG TTCATTAC Predicted gene structure (within gDNA segment 18631 to 10455): Exon 1 12045 11425 ( 621 n); cDNA 2 622 ( 621 n); score: 0.799 MATCH C08HBa0235H18.1- SGN-E542649+ 0.799 621 0.830 C PGS_C08HBa0235H18.1-_SGN-E542649+ (12045 11425) Alignment (genomic DNA sequence = upper lines): TTCGAGGTAC GCAACAACTG TCCATACACC GTCTGGGCGG CGTCGACCCC AATAGGCGGT 11986 || ||||| | |||||||| || |||||| || ||||||| | || ||| |||| ||| TTTGAGGTCC ATAACAACTG CCCCTACACC GTTTGGGCGG CAGCGGTCCC CGTAGGAGGT 61 GGTCGACGTC TTGATCGAGG CCAAACATGG GTCATCAATG CACCGAGGGG CACTAAGATG 11926 |||||||||| | || |||| || | ||| | | | || || |||||| ||| GGTCGACGTC TCGAGAGAGG TCAGAGTTGG TGGTTTTGGG CCCCACCTGG CACTAAAATG 121 GCACGTATAT GGGGTCGTAC GAATTGCAAC TTTGATGGTG CTGGTAGAGG TTCATGTCAG 11866 |||||||| | |||||||||| ||||||||| |||||||||| |||| ||||| || || ||| GCACGTATTT GGGGTCGTAC TAATTGCAAC TTTGATGGTG CTGGAAGAGG TTGGTGCCAG 181 ACTGGTGATT GTGGTGGGGT CTTGCAATGT ACCGGGTGGG GCAAACCACC AAACACCCTG 11806 |||||||||| ||||||| || | || | || | || |||| | |||||||| ||||||| | ACTGGTGATT GTGGTGGAGT CCTGGATTGC AAAGGATGGG GTAAACCACC AAACACCTTA 241 GCCGAGTACG CCTTGGACCA GTTTAGCAAC CTAGATTTCT GGGACATTTC TTTAGTCGAT 11746 || || |||| | ||| |||| |||| | ||| |||||||| | |||| ||||| | | | ||| GCTGAATACG CTTTGAACCA GTTTGGTAAC CTAGATTTTT GGGATATTTC TGTTATTGAT 301 GGATTTAATA TTCCAATGAC TTTCGCCCCG ACCAATCCTA GTGGAGGGAA ATGCCATGCA 11686 ||||| || | | || ||| | ||| | ||| || || ||| | || || ||| ||| || GGATTCAACA TCCCTATGTC TTTTGGCCCA ACTAAGCCTG GCCCTGGAAA ATGTCATCCA 361 ATTCATTGTA CGGCTAATAT AAATGGTGAA TGTCCTGGTT CACTTAGGGT ACCCGGAGGA 11626 ||||| || | | || ||||| ||| |||||| || ||||||| |||||||||| ||| |||||| ATTCAATGCA CAGCCAATAT AAACGGTGAA TGCCCTGGTT CACTTAGGGT ACCTGGAGGA 421 TGTAACAATC CTTGTACCAC GTTCGGAGGA CAACAATATT GTTGCACACA AGGTCCATGT 11566 |||||||| | ||||||| || ||||||||| |||||||||| |||| | || ||||||||| TGTAACAACC CTTGTACAAC ATTCGGAGGA CAACAATATT GTTGTAATCA CGGTCCATGT 481 GGCCCTACTG ATTTGTCGAG ATTTTTCAAA CAAAGATGTC CTGATGCGTA TAGCTACCCA 11506 || ||||||| | ||||| || |||||||||| |||||||||| ||||||| || ||| ||||| GGTCCTACTG AATTGTCAAG ATTTTTCAAA CAAAGATGTC CTGATGCCTA TAGTTACCCT 541 CAAGATGATC CTACTAGCAC ATTTACTTGC CCTAGTGGTA GTACAAATTA TAGGGTTGTT 11446 ||||| |||| | ||||| || |||||||| | ||| | | |||| | || | | | | CAAGACGATC CAACTAGTAC TTTTACTTGT CAGAGTTGGA CTACAGACTA CAAGATAATG 601 TTTTGTCCTA ATGGTGTTAC T 11425 || |||||| |||| ||| | TTCTGTCCTT ATGGCTCTAC T 622 hqPGS_C08HBa0235H18.1-_SGN-E542649+ (12045 11425) ******************************************************************************** EST sequence 689 +strand 595 n (File: SGN-E295872+) 1 TGGCACTAAA ATGGCACGTA TTTGGGGTCG TACTAATTGC AACTTTGATG GTGCTGGAAG 61 AGGTTGGTGC CAGACTGGTG ATTGTGGTGG AGTCCTGGAT TGCAAAGGAT GGGGTAAACC 121 ACCAAACACC TTAGCTGAAT ACGCTTTGAA CCAGTTTGGT AACCTAGATT TTTGGGATAT 181 TTCTGTTATT GATGGATTCA ACATCCCTAT GTCTTTTGGC CCAACTAAGC CTGGCCCTGG 241 AAAATGTCAT CCAATTCAAT GCACAGCCAA TATAAACGGT GAATGCCCTG GTTCACTTAG 301 GGTACCTGGA GGATGTAACA ACCCTTGTAC AACATTCGGA GGACAACAAT ATTGTTGTAA 361 TCACGGTCCA TGTGGTCCTA CTGAATTGTC AAGATTTTTC AAACAAAGAT GTCCTGATGC 421 CTATAGTTAC CCTCAAGACG ATCCAACTAG TACTTTTACT TGTCAGAGTT GGACTACAGA 481 CTACAAGATA ATGTTCTGTC CTTATGGCTC TACTCACAAT GAAACAACAA ATTTCCCATT 541 GGAGATGCCT ACAAGTACTC TTGAAGTTGC TTAATAAGTA GATTCATCAT GAGTG Predicted gene structure (within gDNA segment 17551 to 10305): Exon 1 11937 11425 ( 513 n); cDNA 2 514 ( 513 n); score: 0.823 MATCH C08HBa0235H18.1- SGN-E295872+ 0.823 513 0.862 C PGS_C08HBa0235H18.1-_SGN-E295872+ (11937 11425) Alignment (genomic DNA sequence = upper lines): GGCACTAAGA TGGCACGTAT ATGGGGTCGT ACGAATTGCA ACTTTGATGG TGCTGGTAGA 11878 |||||||| | |||||||||| ||||||||| || ||||||| |||||||||| |||||| ||| GGCACTAAAA TGGCACGTAT TTGGGGTCGT ACTAATTGCA ACTTTGATGG TGCTGGAAGA 61 GGTTCATGTC AGACTGGTGA TTGTGGTGGG GTCTTGCAAT GTACCGGGTG GGGCAAACCA 11818 |||| || | |||||||||| ||||||||| ||| || | | | | || || ||| |||||| GGTTGGTGCC AGACTGGTGA TTGTGGTGGA GTCCTGGATT GCAAAGGATG GGGTAAACCA 121 CCAAACACCC TGGCCGAGTA CGCCTTGGAC CAGTTTAGCA ACCTAGATTT CTGGGACATT 11758 ||||||||| | || || || ||| ||| || |||||| | | |||||||||| ||||| ||| CCAAACACCT TAGCTGAATA CGCTTTGAAC CAGTTTGGTA ACCTAGATTT TTGGGATATT 181 TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTCGCCC CGACCAATCC TAGTGGAGGG 11698 ||| | | | ||||||| || || || ||| |||| | || | || || || | | || TCTGTTATTG ATGGATTCAA CATCCCTATG TCTTTTGGCC CAACTAAGCC TGGCCCTGGA 241 AAATGCCATG CAATTCATTG TACGGCTAAT ATAAATGGTG AATGTCCTGG TTCACTTAGG 11638 ||||| ||| ||||||| || || || ||| ||||| |||| |||| ||||| |||||||||| AAATGTCATC CAATTCAATG CACAGCCAAT ATAAACGGTG AATGCCCTGG TTCACTTAGG 301 GTACCCGGAG GATGTAACAA TCCTTGTACC ACGTTCGGAG GACAACAATA TTGTTGCACA 11578 ||||| |||| |||||||||| |||||||| || ||||||| |||||||||| |||||| | GTACCTGGAG GATGTAACAA CCCTTGTACA ACATTCGGAG GACAACAATA TTGTTGTAAT 361 CAAGGTCCAT GTGGCCCTAC TGATTTGTCG AGATTTTTCA AACAAAGATG TCCTGATGCG 11518 || ||||||| |||| ||||| ||| ||||| |||||||||| |||||||||| ||||||||| CACGGTCCAT GTGGTCCTAC TGAATTGTCA AGATTTTTCA AACAAAGATG TCCTGATGCC 421 TATAGCTACC CACAAGATGA TCCTACTAGC ACATTTACTT GCCCTAGTGG TAGTACAAAT 11458 ||||| |||| | ||||| || ||| ||||| || ||||||| | | ||| | | |||| | TATAGTTACC CTCAAGACGA TCCAACTAGT ACTTTTACTT GTCAGAGTTG GACTACAGAC 481 TATAGGGTTG TTTTTTGTCC TAATGGTGTT ACT 11425 || | | | | || ||||| | |||| | ||| TACAAGATAA TGTTCTGTCC TTATGGCTCT ACT 514 hqPGS_C08HBa0235H18.1-_SGN-E295872+ (11937 11425) ******************************************************************************** EST sequence 544 +strand 583 n (File: SGN-E351866+) 1 GCACGTATTT GGGGTCGTAC TAATTGCAAC TTTGATGGTG CTGGAAGAGG TTGGTGCCAG 61 ACTGGTGATT GTGGTGGAGT CCTGGATTGC AAAGGATGGG GTAAACCACC AAACACCTTA 121 GCTGAATACG CTTTGAACCA GTTTGGTAAC CTAGATTTTT GGGATATTTC TGTTATTGAT 181 GGATTCAACA TCCCTATGTC TTTTGGCCCA ACTAAGCCTG GCCCTGGAAA ATGTCATCCA 241 ATTCAATGCA CAGCCAATAT AAACGGTGAA TGCCCTGGTT CACTTAGGGT ACCTGGAGGA 301 TGTAACAACC CTTGTACAAC ATTCGGAGGA CAACAATATT GTTGTAATCA CGGTCCATGT 361 GGTCCTACTG AATTGTCAAG ATTTTTCAAA CAAAGATGTC CTGATGCCTA TAGTTACCCT 421 CAAGACGATC CAACTAGTAC TTTTACTTGT CAGAGTTGGA CTACAGACTA CAAGATAATG 481 TTCTGTCCTT ATGGCTCTAC TCACAATGAA ACAACAAATT TCCCATTGGA GATGCCTACA 541 AGTACTCTTG AAAGTGCTTN AATAGTAGAT TCATCATGAG TGT Predicted gene structure (within gDNA segment 17421 to 10295): Exon 1 11925 11425 ( 501 n); cDNA 1 501 ( 501 n); score: 0.820 MATCH C08HBa0235H18.1- SGN-E351866+ 0.820 501 0.859 C PGS_C08HBa0235H18.1-_SGN-E351866+ (11925 11425) Alignment (genomic DNA sequence = upper lines): GCACGTATAT GGGGTCGTAC GAATTGCAAC TTTGATGGTG CTGGTAGAGG TTCATGTCAG 11866 |||||||| | |||||||||| ||||||||| |||||||||| |||| ||||| || || ||| GCACGTATTT GGGGTCGTAC TAATTGCAAC TTTGATGGTG CTGGAAGAGG TTGGTGCCAG 60 ACTGGTGATT GTGGTGGGGT CTTGCAATGT ACCGGGTGGG GCAAACCACC AAACACCCTG 11806 |||||||||| ||||||| || | || | || | || |||| | |||||||| ||||||| | ACTGGTGATT GTGGTGGAGT CCTGGATTGC AAAGGATGGG GTAAACCACC AAACACCTTA 120 GCCGAGTACG CCTTGGACCA GTTTAGCAAC CTAGATTTCT GGGACATTTC TTTAGTCGAT 11746 || || |||| | ||| |||| |||| | ||| |||||||| | |||| ||||| | | | ||| GCTGAATACG CTTTGAACCA GTTTGGTAAC CTAGATTTTT GGGATATTTC TGTTATTGAT 180 GGATTTAATA TTCCAATGAC TTTCGCCCCG ACCAATCCTA GTGGAGGGAA ATGCCATGCA 11686 ||||| || | | || ||| | ||| | ||| || || ||| | || || ||| ||| || GGATTCAACA TCCCTATGTC TTTTGGCCCA ACTAAGCCTG GCCCTGGAAA ATGTCATCCA 240 ATTCATTGTA CGGCTAATAT AAATGGTGAA TGTCCTGGTT CACTTAGGGT ACCCGGAGGA 11626 ||||| || | | || ||||| ||| |||||| || ||||||| |||||||||| ||| |||||| ATTCAATGCA CAGCCAATAT AAACGGTGAA TGCCCTGGTT CACTTAGGGT ACCTGGAGGA 300 TGTAACAATC CTTGTACCAC GTTCGGAGGA CAACAATATT GTTGCACACA AGGTCCATGT 11566 |||||||| | ||||||| || ||||||||| |||||||||| |||| | || ||||||||| TGTAACAACC CTTGTACAAC ATTCGGAGGA CAACAATATT GTTGTAATCA CGGTCCATGT 360 GGCCCTACTG ATTTGTCGAG ATTTTTCAAA CAAAGATGTC CTGATGCGTA TAGCTACCCA 11506 || ||||||| | ||||| || |||||||||| |||||||||| ||||||| || ||| ||||| GGTCCTACTG AATTGTCAAG ATTTTTCAAA CAAAGATGTC CTGATGCCTA TAGTTACCCT 420 CAAGATGATC CTACTAGCAC ATTTACTTGC CCTAGTGGTA GTACAAATTA TAGGGTTGTT 11446 ||||| |||| | ||||| || |||||||| | ||| | | |||| | || | | | | CAAGACGATC CAACTAGTAC TTTTACTTGT CAGAGTTGGA CTACAGACTA CAAGATAATG 480 TTTTGTCCTA ATGGTGTTAC T 11425 || |||||| |||| ||| | TTCTGTCCTT ATGGCTCTAC T 501 hqPGS_C08HBa0235H18.1-_SGN-E351866+ (11925 11425) ******************************************************************************** EST sequence 149 -strand 734 n (File: SGN-E373165-) 1 TTGGTGCCAG ACCGGTGATT GTGGTGGAGT CTTGGAATGC AAAGGATGGG GTAAACCACC 61 AAACACCTTA GCTGAATACG CTTTGAATCA ATTTAGCAAC TTAGATTTCT GGGACATTTC 121 TGTTATTGAT GGATTCAACA TCCCTATGTC TTTCGGCCCA ACTAACCCTG GGCCGGGAAA 181 ATGTCATCCA ATTCAATGTG TTGCTAATAT AAACGGTGAA TGCCCTGGTT CACTTAGGGT 241 ACCCGGAGGA TGTAACAACC CTTGTACTAC ATTCGGAGGA CAACAATATT GTTGCACTCA 301 AGGTCCATGT GGTCCTACCG ATTTGTCAAG ATTTTTCAAA CAAAGATGTC CCGATGCCTA 361 TAGTTATCCT CAAGACGATC CAACAAGTAC TTTTACTTGT CAGAGTTGGA CTACAGACTA 421 CAAGGTTATG TTTTGTCCTT ATGGCTCTAC TCACAATGAA ACAACAAATT TCCCATTGGA 481 GATTCCTACA AATACTCTTG AAGTGGCTTA ATTAAGTAGA AATCTTGAGT TGAGCCAATC 541 TCTTTTTTGT TAAATTTGTT TTGAAGATGG ACATTGTCTT TAATTTGCCT TGTACACATT 601 TTTTTTACAT TTGTTTGTTT GAAGTGGCTA AGATTTGAAT AACAATCTAT GATCGATGCT 661 TTGTCTTATA TATGGTATTT TAATTTTAAA TTGAAAAAAA AAAAAAAAAA AACTCGTGAC 721 TAGTTCTCTC GAGG Predicted gene structure (within gDNA segment 14492 to 6609): Exon 1 11875 11425 ( 451 n); cDNA 1 451 ( 451 n); score: 0.823 PPA cDNA 694 713 MATCH C08HBa0235H18.1- SGN-E373165- 0.823 451 0.614 C PGS_C08HBa0235H18.1-_SGN-E373165- (11875 11425) Alignment (genomic DNA sequence = upper lines): TTCATGTCAG ACTGGTGATT GTGGTGGGGT CTTGCAATGT ACCGGGTGGG GCAAACCACC 11816 || || ||| || ||||||| ||||||| || |||| |||| | || |||| | |||||||| TTGGTGCCAG ACCGGTGATT GTGGTGGAGT CTTGGAATGC AAAGGATGGG GTAAACCACC 60 AAACACCCTG GCCGAGTACG CCTTGGACCA GTTTAGCAAC CTAGATTTCT GGGACATTTC 11756 ||||||| | || || |||| | ||| | || ||||||||| ||||||||| |||||||||| AAACACCTTA GCTGAATACG CTTTGAATCA ATTTAGCAAC TTAGATTTCT GGGACATTTC 120 TTTAGTCGAT GGATTTAATA TTCCAATGAC TTTCGCCCCG ACCAATCCTA GTGGAGGGAA 11696 | | | ||| ||||| || | | || ||| | ||||| ||| || || ||| | || || TGTTATTGAT GGATTCAACA TCCCTATGTC TTTCGGCCCA ACTAACCCTG GGCCGGGAAA 180 ATGCCATGCA ATTCATTGTA CGGCTAATAT AAATGGTGAA TGTCCTGGTT CACTTAGGGT 11636 ||| ||| || ||||| ||| |||||||| ||| |||||| || ||||||| |||||||||| ATGTCATCCA ATTCAATGTG TTGCTAATAT AAACGGTGAA TGCCCTGGTT CACTTAGGGT 240 ACCCGGAGGA TGTAACAATC CTTGTACCAC GTTCGGAGGA CAACAATATT GTTGCACACA 11576 |||||||||| |||||||| | ||||||| || ||||||||| |||||||||| ||||||| || ACCCGGAGGA TGTAACAACC CTTGTACTAC ATTCGGAGGA CAACAATATT GTTGCACTCA 300 AGGTCCATGT GGCCCTACTG ATTTGTCGAG ATTTTTCAAA CAAAGATGTC CTGATGCGTA 11516 |||||||||| || ||||| | ||||||| || |||||||||| |||||||||| | ||||| || AGGTCCATGT GGTCCTACCG ATTTGTCAAG ATTTTTCAAA CAAAGATGTC CCGATGCCTA 360 TAGCTACCCA CAAGATGATC CTACTAGCAC ATTTACTTGC CCTAGTGGTA GTACAAATTA 11456 ||| || || ||||| |||| | || || || |||||||| | ||| | | |||| | || TAGTTATCCT CAAGACGATC CAACAAGTAC TTTTACTTGT CAGAGTTGGA CTACAGACTA 420 TAGGGTTGTT TTTTGTCCTA ATGGTGTTAC T 11425 | |||| | ||||||||| |||| ||| | CAAGGTTATG TTTTGTCCTT ATGGCTCTAC T 451 hqPGS_C08HBa0235H18.1-_SGN-E373165- (11875 11425) ******************************************************************************** EST sequence 921 -strand 652 n (File: SGN-E352998-) 1 TTTTTTTTTT TTAAGACAAA TTAAAGTACA ATATGTTATT GAAATCTTAG CCACCTCAAG 61 ATAACAAACT AAAAGAAATG TGGATAATAC AAAAGACAAG TAATGAACAA AACTCAACCA 121 TTTTGAACAA GAAAGAGGTG GCTACACTCA TGATGAATCT ACTTATTAAG CAACTTCAAG 181 AGTACTTGTA GGCATCTCCA ATGGGAAATT TGTTGTTTCA TTGTGAGTAG AGCCATAAGG 241 ACAGAACATT ATCTTGTAGT CTGTAGTCCA ACTCTGACAA GTAAAAGTAC TAGTTGGATC 301 GTCTTGAGGG TAACTATAGG CATCAGGACA TCTTTGTTTG AAAAATCTTG ACAATTCAGT 361 AGGACCACAT GGACCGTGAT TACAACAATA TTGTTGTCCT CCGAATGTTG TACAAGGGTT 421 GTTACATCCT CCAGGTACCC TAAGTGAACC AGGGCATTCA CCGTTTATAT TGGCTGTGCA 481 TTGAATTGGA TGACATTTTC CAGGGCCAGG CTTAGTTGGG CCAAAAGACA TAGGGATGTT 541 GAATCCATCA ATAACAGAAA TATCCCAAAA ATCTAGGTTA CCAAACTGGT TCAAAGCGTA 601 TTCAGCTAAG GTGTTTGGTG GTTTACCCCA TCCTTTGCAA TCCAGGACTC CA Predicted gene structure (within gDNA segment 9465 to 16681): Exon 1 11425 11851 ( 427 n); cDNA 226 652 ( 427 n); score: 0.803 PPA cDNA 12 1 MATCH C08HBa0235H18.1+ SGN-E352998- 0.803 427 0.655 C PGS_C08HBa0235H18.1+_SGN-E352998- (11425 11851) Alignment (genomic DNA sequence = upper lines): AGTAACACCA TTAGGACAAA AAACAACCCT ATAATTTGTA CTACCACTAG GGCAAGTAAA 11484 |||| ||| | |||||| | | | | | | || | |||| | | ||| | |||||||| AGTAGAGCCA TAAGGACAGA ACATTATCTT GTAGTCTGTA GTCCAACTCT GACAAGTAAA 285 TGTGCTAGTA GGATCATCTT GTGGGTAGCT ATACGCATCA GGACATCTTT GTTTGAAAAA 11544 || ||||| ||||| |||| | ||||| || ||| |||||| |||||||||| |||||||||| AGTACTAGTT GGATCGTCTT GAGGGTAACT ATAGGCATCA GGACATCTTT GTTTGAAAAA 345 TCTCGACAAA TCAGTAGGGC CACATGGACC TTGTGTGCAA CAATATTGTT GTCCTCCGAA 11604 ||| ||||| |||||||| | |||||||||| || | ||| |||||||||| |||||||||| TCTTGACAAT TCAGTAGGAC CACATGGACC GTGATTACAA CAATATTGTT GTCCTCCGAA 405 CGTGGTACAA GGATTGTTAC ATCCTCCGGG TACCCTAAGT GAACCAGGAC ATTCACCATT 11664 || |||||| || ||||||| ||||||| || |||||||||| |||||||| | ||||||| || TGTTGTACAA GGGTTGTTAC ATCCTCCAGG TACCCTAAGT GAACCAGGGC ATTCACCGTT 465 TATATTAGCC GTACAATGAA TTGCATGGCA TTTCCCTCCA CTAGGATTGG TCGGGGCGAA 11724 |||||| || || || |||| ||| ||| || ||| || | ||| || | | ||| | || TATATTGGCT GTGCATTGAA TTGGATGACA TTTTCCAGGG CCAGGCTTAG TTGGGCCAAA 525 AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAGAAATCTA GGTTGCTAAA 11784 || ||| || || || |||| |||| | | |||||| ||| || ||||||| |||| | ||| AGACATAGGG ATGTTGAATC CATCAATAAC AGAAATATCC CAAAAATCTA GGTTACCAAA 585 CTGGTCCAAG GCGTACTCGG CCAGGGTGTT TGGTGGTTTG CCCCACCCGG TACATTGCAA 11844 ||||| ||| ||||| || | | | |||||| ||||||||| ||||| || | || | || CTGGTTCAAA GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT TGCAATCCAG 645 GACCCCA 11851 ||| ||| GACTCCA 652 hqPGS_C08HBa0235H18.1+_SGN-E352998- (11425 11851) ******************************************************************************** EST sequence 1073 +strand 494 n (File: SGN-E208399+) 1 GGTGCCAGAC CGGTGATTGT GGTGGAGTCT TGGAATGCAA AGGATGGGGT AAACCACCAA 61 ACACCTTAAC TGAATACGCT TTGAATCAAT TTAGCAACTT AGATTTCTGG GACATTTCTG 121 TTATTGATGG ATTCAACATC CCTATGTCTT TCGGCCCAAC TAACCCTGGG CCGGGAAAAT 181 GTCATCCAAT TCAATGTGTT GCTAATATAA ACGGCGAATG CCCTGGTTCA CTTAGGGTAC 241 CCGGAGGATG TAACAACCCT TGTACTACAT TCGGAGGACA ACAATATTGT TGCACTCAAG 301 GTCCATGTGG TCCTACCGAT TTGTCAAGAT TTTTCAAACA AAGATGTCCC GATGCCTATA 361 GTTATGCTCA AGACGATCCA ACAAGTACTT TTACTTGTCA GAGTTGGACT ACAGACTACA 421 AGGTTATGTT ATGTCCTTAT GGCTCTACTC ACAATGAAAC AACAAATTTC CCATTGGAGA 481 TTCCTACAAA TACT Predicted gene structure (within gDNA segment 14462 to 8979): Exon 1 11871 11433 ( 439 n); cDNA 3 441 ( 439 n); score: 0.820 MATCH C08HBa0235H18.1- SGN-E208399+ 0.820 439 0.889 C PGS_C08HBa0235H18.1-_SGN-E208399+ (11871 11433) Alignment (genomic DNA sequence = upper lines): TGTCAGACTG GTGATTGTGG TGGGGTCTTG CAATGTACCG GGTGGGGCAA ACCACCAAAC 11812 || ||||| | |||||||||| ||| |||||| |||| | | | ||||| || |||||||||| TGCCAGACCG GTGATTGTGG TGGAGTCTTG GAATGCAAAG GATGGGGTAA ACCACCAAAC 62 ACCCTGGCCG AGTACGCCTT GGACCAGTTT AGCAACCTAG ATTTCTGGGA CATTTCTTTA 11752 ||| | | | | ||||| || | | || ||| |||||| ||| |||||||||| ||||||| | ACCTTAACTG AATACGCTTT GAATCAATTT AGCAACTTAG ATTTCTGGGA CATTTCTGTT 122 GTCGATGGAT TTAATATTCC AATGACTTTC GCCCCGACCA ATCCTAGTGG AGGGAAATGC 11692 | ||||||| | || || || ||| ||||| | ||| || | | ||| | || ||||| ATTGATGGAT TCAACATCCC TATGTCTTTC GGCCCAACTA ACCCTGGGCC GGGAAAATGT 182 CATGCAATTC ATTGTACGGC TAATATAAAT GGTGAATGTC CTGGTTCACT TAGGGTACCC 11632 ||| |||||| | ||| || ||||||||| || ||||| | |||||||||| |||||||||| CATCCAATTC AATGTGTTGC TAATATAAAC GGCGAATGCC CTGGTTCACT TAGGGTACCC 242 GGAGGATGTA ACAATCCTTG TACCACGTTC GGAGGACAAC AATATTGTTG CACACAAGGT 11572 |||||||||| |||| ||||| ||| || ||| |||||||||| |||||||||| ||| |||||| GGAGGATGTA ACAACCCTTG TACTACATTC GGAGGACAAC AATATTGTTG CACTCAAGGT 302 CCATGTGGCC CTACTGATTT GTCGAGATTT TTCAAACAAA GATGTCCTGA TGCGTATAGC 11512 |||||||| | |||| ||||| ||| |||||| |||||||||| ||||||| || ||| ||||| CCATGTGGTC CTACCGATTT GTCAAGATTT TTCAAACAAA GATGTCCCGA TGCCTATAGT 362 TACCCACAAG ATGATCCTAC TAGCACATTT ACTTGCCCTA GTGGTAGTAC AAATTATAGG 11452 || | |||| | ||||| || || || ||| ||||| | | || | | ||| | | || | | TATGCTCAAG ACGATCCAAC AAGTACTTTT ACTTGTCAGA GTTGGACTAC AGACTACAAG 422 GTTGTTTTTT GTCCTAATG 11433 ||| | || | ||||| ||| GTTATGTTAT GTCCTTATG 441 hqPGS_C08HBa0235H18.1-_SGN-E208399+ (11871 11433) ******************************************************************************** EST sequence 1189 +strand 523 n (File: SGN-E292854+) 1 TGGTGCCAGA CCGGTGATTG TGGTGGAGTC TTGGAATGCA AAGGATGGGG TAAACCACCA 61 AACACCTTAG CTGAATACGC TTTGAATCAA TTTAGCAACT TAGATTTCTG GGACATTTCT 121 GTTATTGATG GATTCAACAT CCCTATGTCT TTCGGCCCAA CTAACCCTGG GCCGGGAAAA 181 TGTCATCCAA TTCAATGTGT TGCTAATATA AACGGTGAAT GCCCTGGTTC ACTTAGGGTA 241 CCCGGAGGAT GTAACAACCC TTGTACTACA TTCGGAGGAC AACAATATTG TTGCACTCAA 301 GGTCCATGTG GTCCTACCGA TTTGTCAAGA TTTTTCAAAC AAAGATGTCC CGATGCCTAT 361 AGTTATCCTC AAGACGATCC AACAAGTACT TTTACTTGTC AGAGTTGGAC TACAGACTAC 421 AAGGTTATGT TTTGTCCTTA TGGCTCTACT CACAATGAAA CAACAAATTT CCCATTGGAG 481 ATTCCTACAA ATACTCTTGA AGTGGCTTAA TTAAGTAGAA ATC Predicted gene structure (within gDNA segment 14472 to 8699): Exon 1 11871 11433 ( 439 n); cDNA 4 442 ( 439 n); score: 0.829 MATCH C08HBa0235H18.1- SGN-E292854+ 0.829 439 0.839 C PGS_C08HBa0235H18.1-_SGN-E292854+ (11871 11433) Alignment (genomic DNA sequence = upper lines): TGTCAGACTG GTGATTGTGG TGGGGTCTTG CAATGTACCG GGTGGGGCAA ACCACCAAAC 11812 || ||||| | |||||||||| ||| |||||| |||| | | | ||||| || |||||||||| TGCCAGACCG GTGATTGTGG TGGAGTCTTG GAATGCAAAG GATGGGGTAA ACCACCAAAC 63 ACCCTGGCCG AGTACGCCTT GGACCAGTTT AGCAACCTAG ATTTCTGGGA CATTTCTTTA 11752 ||| | || | | ||||| || | | || ||| |||||| ||| |||||||||| ||||||| | ACCTTAGCTG AATACGCTTT GAATCAATTT AGCAACTTAG ATTTCTGGGA CATTTCTGTT 123 GTCGATGGAT TTAATATTCC AATGACTTTC GCCCCGACCA ATCCTAGTGG AGGGAAATGC 11692 | ||||||| | || || || ||| ||||| | ||| || | | ||| | || ||||| ATTGATGGAT TCAACATCCC TATGTCTTTC GGCCCAACTA ACCCTGGGCC GGGAAAATGT 183 CATGCAATTC ATTGTACGGC TAATATAAAT GGTGAATGTC CTGGTTCACT TAGGGTACCC 11632 ||| |||||| | ||| || ||||||||| |||||||| | |||||||||| |||||||||| CATCCAATTC AATGTGTTGC TAATATAAAC GGTGAATGCC CTGGTTCACT TAGGGTACCC 243 GGAGGATGTA ACAATCCTTG TACCACGTTC GGAGGACAAC AATATTGTTG CACACAAGGT 11572 |||||||||| |||| ||||| ||| || ||| |||||||||| |||||||||| ||| |||||| GGAGGATGTA ACAACCCTTG TACTACATTC GGAGGACAAC AATATTGTTG CACTCAAGGT 303 CCATGTGGCC CTACTGATTT GTCGAGATTT TTCAAACAAA GATGTCCTGA TGCGTATAGC 11512 |||||||| | |||| ||||| ||| |||||| |||||||||| ||||||| || ||| ||||| CCATGTGGTC CTACCGATTT GTCAAGATTT TTCAAACAAA GATGTCCCGA TGCCTATAGT 363 TACCCACAAG ATGATCCTAC TAGCACATTT ACTTGCCCTA GTGGTAGTAC AAATTATAGG 11452 || || |||| | ||||| || || || ||| ||||| | | || | | ||| | | || | | TATCCTCAAG ACGATCCAAC AAGTACTTTT ACTTGTCAGA GTTGGACTAC AGACTACAAG 423 GTTGTTTTTT GTCCTAATG 11433 ||| | |||| ||||| ||| GTTATGTTTT GTCCTTATG 442 hqPGS_C08HBa0235H18.1-_SGN-E292854+ (11871 11433) ******************************************************************************** EST sequence 959 +strand 550 n (File: SGN-E256630+) 1 GCGACGTCTC AATCGAAGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 61 ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA AGCAGAGGTA CATGTCAGAC 121 TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTATC 181 CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 241 ATTTAATATT CCAATGACTT TTGCCCCAAC AAAACCTAGT GGAGGAAAAT GTCACGCAAT 301 TCATTGCACG GCCAATATAA ATGGTGAATG TCCTCGCGCC CTTAAGGTAC CTGGAGGATG 361 TAACAACCCT TGTACCACGT TTGGAGGACA ACAATATTGT TGCACCCAAA GTCCATGTGG 421 CCCTACAGAG TTGTCCAAAT TTTTCAAGAA AAGATGTCCC GATGCTTATA GCTACCCACA 481 AGACGATCCT ACAAGCACAT TTACTTGCCC TGGTGGTAGT ACAAACTATA GGGTTGTCTT 541 TTGTCCTAAT Predicted gene structure (within gDNA segment 12736 to 10473): Exon 1 11982 11434 ( 549 n); cDNA 2 550 ( 549 n); score: 0.900 MATCH C08HBa0235H18.1- SGN-E256630+ 0.900 549 0.998 C PGS_C08HBa0235H18.1-_SGN-E256630+ (11982 11434) Alignment (genomic DNA sequence = upper lines): CGACGTCTTG ATCGAGGCCA AACATGGGTC ATCAATGCAC CGAGGGGCAC TAAGATGGCA 11923 |||||||| ||||| |||| |||||||||| |||||||| | ||||||| || |||||||||| CGACGTCTCA ATCGAAGCCA AACATGGGTC ATCAATGCTC CGAGGGGAAC TAAGATGGCA 61 CGTATATGGG GTCGTACGAA TTGCAACTTT GATGGTGCTG GTAGAGGTTC ATGTCAGACT 11863 |||||||||| ||||||| |||||||||| ||| ||| | |||||| | |||||||||| CGTATATGGG GTCGTACTGG TTGCAACTTT AATGCTGCAA GCAGAGGTAC ATGTCAGACT 121 GGTGATTGTG GTGGGGTCTT GCAATGTACC GGGTGGGGCA AACCACCAAA CACCCTGGCC 11803 |||||||||| |||| ||||| || |||||| || ||||||| |||| ||||| |||||| || GGTGATTGTG GTGGAGTCTT ACAGTGTACC GGATGGGGCA AACCCCCAAA CACCCTATCC 181 GAGTACGCCT TGGACCAGTT TAGCAACCTA GATTTCTGGG ACATTTCTTT AGTCGATGGA 11743 |||||||||| |||||||||| ||||||| || ||||| |||| |||||||||| |||||||||| GAGTACGCCT TGGACCAGTT TAGCAACTTA GATTTTTGGG ACATTTCTTT AGTCGATGGA 241 TTTAATATTC CAATGACTTT CGCCCCGACC AATCCTAGTG GAGGGAAATG CCATGCAATT 11683 |||||||||| |||||||||| ||||| || || ||||||| |||| ||||| || |||||| TTTAATATTC CAATGACTTT TGCCCCAACA AAACCTAGTG GAGGAAAATG TCACGCAATT 301 CATTGTACGG CTAATATAAA TGGTGAATGT CCTGGTTCAC TTAGGGTACC CGGAGGATGT 11623 ||||| |||| | |||||||| |||||||||| ||| | | | ||| |||||| ||||||||| CATTGCACGG CCAATATAAA TGGTGAATGT CCTCGCGCCC TTAAGGTACC TGGAGGATGT 361 AACAATCCTT GTACCACGTT CGGAGGACAA CAATATTGTT GCACACAAGG TCCATGTGGC 11563 ||||| |||| |||||||||| ||||||||| |||||||||| |||| ||| | |||||||||| AACAACCCTT GTACCACGTT TGGAGGACAA CAATATTGTT GCACCCAAAG TCCATGTGGC 421 CCTACTGATT TGTCGAGATT TTTCAAACAA AGATGTCCTG ATGCGTATAG CTACCCACAA 11503 ||||| || | |||| | ||| |||||| || |||||||| | |||| ||||| |||||||||| CCTACAGAGT TGTCCAAATT TTTCAAGAAA AGATGTCCCG ATGCTTATAG CTACCCACAA 481 GATGATCCTA CTAGCACATT TACTTGCCCT AGTGGTAGTA CAAATTATAG GGTTGTTTTT 11443 || ||||||| | |||||||| |||||||||| ||||||||| |||| ||||| |||||| ||| GACGATCCTA CAAGCACATT TACTTGCCCT GGTGGTAGTA CAAACTATAG GGTTGTCTTT 541 TGTCCTAAT 11434 ||||||||| TGTCCTAAT 550 hqPGS_C08HBa0235H18.1-_SGN-E256630+ (11982 11434) ******************************************************************************** EST sequence 882 +strand 353 n (File: SGN-E337179+) 1 TATGCCCTAG TCCACTTAGG GTACCCGGAG GATGTAACAA CCCTTGTACC ACGTTCGGAG 61 GACAACAATA TTGTTGTACT CAAGGCCCAT GTGGTCCTAC AAAATTTTCG AGATTTTTCA 121 AACAAAGGTG CCCTAATGCG TATAGCTACC CTCAAGATGA TCCTACTAGC TTATTCACTT 181 GCCCTAGTGG TAGTACAAAT TATAGGGTTG TTTTTTGCCC ATAATTGATG CCACAATAAA 241 GCATATTTTG CTACAAATTG AATGGTATGA AAAAATTACC AAAATAATAA GCATCTTAAA 301 CGGTCTGCTT NNAAAAAAAA AAAAAAAAAG AACAAAAAAA AAAAAAAAAA AAA Predicted gene structure (within gDNA segment 12365 to 9471): Exon 1 11656 11436 ( 221 n); cDNA 2 221 ( 220 n); score: 0.905 Intron 1 11435 10445 ( 991 n); Pd: 0.000 (s: 0.94), Pa: 0.122 (s: 0) Exon 2 10444 10430 ( 15 n); cDNA 222 235 ( 14 n); score: 0.600 Intron 2 10429 10267 ( 163 n); Pd: 0.885 (s: 0), Pa: 0.960 (s: 0) Exon 3 10266 10252 ( 15 n); cDNA 236 249 ( 14 n); score: 0.800 PPA cDNA 313 332 MATCH C08HBa0235H18.1- SGN-E337179+ 0.905 251 0.711 C PGS_C08HBa0235H18.1-_SGN-E337179+ (11656 11436,10444 10430,10266 10252) Alignment (genomic DNA sequence = upper lines): ATGTCCTGGT TCACTTAGGG TACCCGGAGG ATGTAACAAT CCTTGTACCA CGTTCGGAGG 11597 ||| ||| || ||||||||| |||||||||| ||||||||| |||||||||| |||||||||| ATGCCCTAGT CCACTTAGGG TACCCGGAGG ATGTAACAAC CCTTGTACCA CGTTCGGAGG 61 ACAACAATAT TGTTGCACAC AAGGTCCATG TGGCCCTACT GATTTGTCGA GATTTTTCAA 11537 |||||||||| ||||| || | |||| ||||| ||| ||||| | || |||| |||||||||| ACAACAATAT TGTTGTACTC AAGGCCCATG TGGTCCTACA AAATTTTCGA GATTTTTCAA 121 ACAAAGATGT CCTGATGCGT ATAGCTACCC ACAAGATGAT CCTACTAGCA CATTTACTTG 11477 |||||| || ||| |||||| |||||||||| ||||||||| ||||||||| ||| ||||| ACAAAGGTGC CCTAATGCGT ATAGCTACCC TCAAGATGAT CCTACTAGCT TATTCACTTG 181 CCCTAGTGGT AGTACAAATT ATAGGGTTGT TTTTTGTCCT AATGGTGTTA CTAGCCCAAA 11417 |||||||||| |||||||||| |||||||||| |||||| || | CCCTAGTGGT AGTACAAATT ATAGGGTTGT TTTTTG-CCC A......... .......... 221 TTTCCCCTTG GAGATGCCCT CAAGTGATGA AGAGGCTAAG TAAAATTGAG TCACTTTCTT 11357 .......... .......... .......... .......... .......... .......... 221 TTAAATTGCT TGAAGTAGTC GAGTTATATA ATTGGCTTGT AATAAACCTA ATATAATTAC 11297 .......... .......... .......... .......... .......... .......... 221 ATGAATAAAA GTCACATCAT CACAAATATG TTGTTTCGAA TATTATTTTA TGTATATTTT 11237 .......... .......... .......... .......... .......... .......... 221 GTTATTTACG TATTAACTTG TCAAATAAAA GAATAATATC AGTCAGTTTA AAAACATAAA 11177 .......... .......... .......... .......... .......... .......... 221 AACTATAATA TACTGGATAA GATAAATAAG AACATCTCAC GAGATTATTT TATCTCATTT 11117 .......... .......... .......... .......... .......... .......... 221 TTTTATATGA TAAAAGTTCC ATCACAAAAT ATAAAAATAA AATAAATTAA TCTCAAAAGT 11057 .......... .......... .......... .......... .......... .......... 221 AACTAGTACC TTAAAATAAT ATAAAATAAA ATAATCCCAT TTTATTAGAA ATTATTATCC 10997 .......... .......... .......... .......... .......... .......... 221 ACAATTTTAG GGCAAAGTCA AAAGTAGATG GAAATATTTG TTTATAGGCG GCTCTTAGAA 10937 .......... .......... .......... .......... .......... .......... 221 CATTTTCAAG CTAAATGATG TTAGCTGCAC GTGCTACTTG ACACAATGCC AAAAGATTAA 10877 .......... .......... .......... .......... .......... .......... 221 ATTGAGCAAA ATTTATATTT TTATTAAAAA AAATTATATT TATAAACGTA GAAAATTCAC 10817 .......... .......... .......... .......... .......... .......... 221 TATTTTTTTT TTATCATTAA CATGTTTTAC ATATTTTAGA GGATTAAGAG TGAAAAAGAT 10757 .......... .......... .......... .......... .......... .......... 221 TCTAATAACT TGTTAACTTG ATATAATAGA TTAACAAGTT GATTATATCG CACTCTAAAG 10697 .......... .......... .......... .......... .......... .......... 221 AATAAAATGA ATTGTCAAAA ATAATATTAA TAATTTATCG CCACTCAAAA AAATAAAAAA 10637 .......... .......... .......... .......... .......... .......... 221 TATTGTAGAA CGTGACTTTA TCAATACTAA TCTCTTTTAA AACAACGATT GATTTGAACT 10577 .......... .......... .......... .......... .......... .......... 221 TCACCGAAAT TGATGGAATG AAATGACTAA ATATTGTATT GGGATAAAAT AATGGGATAA 10517 .......... .......... .......... .......... .......... .......... 221 TTGTATATAA TAGCAAACTA ATAACCTAAA ATAAATGGAG TAGCTATGAT TTGATTTAAT 10457 .......... .......... .......... .......... .......... .......... 221 TGTGCACCAT AGCAAACGTT AGCCAAAGTT TGTCAGTCGC CTCTCTCTCT TTATACACAA 10397 || | | |||| | .......... ..TAATTGAT -GCCACA... .......... .......... .......... 235 AAGTGTATAA ATTGTGTTTC TGTTTTGTAT AAGCGAGAGA AAACTGTATA TACACATGCA 10337 .......... .......... .......... .......... .......... .......... 235 AAAACATATA TCTTCGTGTT ATACACTTAA TTATACAATT TACAAATATT TTACTTCAAT 10277 .......... .......... .......... .......... .......... .......... 235 TCAATTGTAG ACAAATGCAA ATTTT 10252 | ||| ||| ||||| .......... ATAAA-GCAT ATTTT 249 hqPGS_C08HBa0235H18.1-_SGN-E337179+ (11656 11436) ******************************************************************************** EST sequence 655 +strand 511 n (File: SGN-E204787+) 1 CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG CACGTATATG GGGTCGTACT 61 GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA CTGGTGATTG TGGTGGAGTC 121 TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG CCGAGTACGC CTTGGACCAG 181 TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG GATTTAATAT TCCAATGACT 241 TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA TTCATTGCAC GGCCAATATA 301 AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT GTAACAACCC TTGTACCACG 361 TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG GCCCTACAGA GTTGTCCAAA 421 TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC AAGACGATCC TACAAGCACA 481 TTTACTTGCC CTGGTGGTAG TACAAACTAT A Predicted gene structure (within gDNA segment 12564 to 10673): Exon 1 11964 11454 ( 511 n); cDNA 1 511 ( 511 n); score: 0.906 MATCH C08HBa0235H18.1- SGN-E204787+ 0.906 511 1.000 C PGS_C08HBa0235H18.1-_SGN-E204787+ (11964 11454) Alignment (genomic DNA sequence = upper lines): CAAACATGGG TCATCAATGC ACCGAGGGGC ACTAAGATGG CACGTATATG GGGTCGTACG 11905 |||||||||| |||||||||| |||||||| |||||||||| |||||||||| ||||||||| CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG CACGTATATG GGGTCGTACT 60 AATTGCAACT TTGATGGTGC TGGTAGAGGT TCATGTCAGA CTGGTGATTG TGGTGGGGTC 11845 |||||||| || ||| ||| || |||||| ||||||||| |||||||||| |||||| ||| GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA CTGGTGATTG TGGTGGAGTC 120 TTGCAATGTA CCGGGTGGGG CAAACCACCA AACACCCTGG CCGAGTACGC CTTGGACCAG 11785 || || |||| |||| ||||| |||||| ||| |||||||| | |||||||||| |||||||||| TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG CCGAGTACGC CTTGGACCAG 180 TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG GATTTAATAT TCCAATGACT 11725 ||||||||| ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG GATTTAATAT TCCAATGACT 240 TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA TTCATTGTAC GGCTAATATA 11665 || ||||| | | || ||||| |||||| ||| || || |||| ||||||| || ||| |||||| TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA TTCATTGCAC GGCCAATATA 300 AATGGTGAAT GTCCTGGTTC ACTTAGGGTA CCCGGAGGAT GTAACAATCC TTGTACCACG 11605 |||||||||| ||||| | | |||| |||| || ||||||| ||||||| || |||||||||| AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT GTAACAACCC TTGTACCACG 360 TTCGGAGGAC AACAATATTG TTGCACACAA GGTCCATGTG GCCCTACTGA TTTGTCGAGA 11545 || ||||||| |||||||||| |||||| ||| |||||||||| ||||||| || ||||| | | TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG GCCCTACAGA GTTGTCCAAA 420 TTTTTCAAAC AAAGATGTCC TGATGCGTAT AGCTACCCAC AAGATGATCC TACTAGCACA 11485 |||||||| |||||||||| ||||| ||| |||||||||| |||| ||||| ||| |||||| TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC AAGACGATCC TACAAGCACA 480 TTTACTTGCC CTAGTGGTAG TACAAATTAT A 11454 |||||||||| || ||||||| |||||| ||| | TTTACTTGCC CTGGTGGTAG TACAAACTAT A 511 hqPGS_C08HBa0235H18.1-_SGN-E204787+ (11964 11454) ******************************************************************************** EST sequence 878 +strand 499 n (File: SGN-E200099+) 1 ATCAATGCTC CGAGGGGAAC TAAGATGGCA CGTATATGGG GTCGTACTGG TTGCAACTTT 61 AATGCTGCAG GCAGAGGTAC ATGTCAGACT GGTGATTGTG GTGGAGTCTT ACAGTGTACC 121 GGATGGGGCA AACCCCCAAA CACCCTAGCC GAGTACGCCT TGGACCAGTT TAGCAACTTA 181 GATTTTTGGG ACATTTCTTT AGTCGATGGA TTTAATATTC CAATGACTTT TGCCCCAACA 241 AAACCTAGTG GAGGAAAATG TCACGCAATT CATTGCACGG CCAATATAAA TGGTGAATGT 301 CCTCGCGCCC TTAAGGTACC TGGAGGATGT AACAACCCTT GTACCACGTT TGGAGGACAA 361 CAATATTGTT GCACCCAAGG TCCATGTGGC CCTACAGAGT TGTCCAAATT TTTCAAGAAA 421 AGATGTCCCG ATGCTTATAG CTACCCACAA GACGATCCTA CAAGCACATT TACTTGCCCT 481 GGTGGTAGTA CAAACTATA Predicted gene structure (within gDNA segment 13875 to 10673): Exon 1 11952 11454 ( 499 n); cDNA 1 499 ( 499 n); score: 0.904 MATCH C08HBa0235H18.1- SGN-E200099+ 0.904 499 1.000 C PGS_C08HBa0235H18.1-_SGN-E200099+ (11952 11454) Alignment (genomic DNA sequence = upper lines): ATCAATGCAC CGAGGGGCAC TAAGATGGCA CGTATATGGG GTCGTACGAA TTGCAACTTT 11893 |||||||| | ||||||| || |||||||||| |||||||||| ||||||| |||||||||| ATCAATGCTC CGAGGGGAAC TAAGATGGCA CGTATATGGG GTCGTACTGG TTGCAACTTT 60 GATGGTGCTG GTAGAGGTTC ATGTCAGACT GGTGATTGTG GTGGGGTCTT GCAATGTACC 11833 ||| ||| | | |||||| | |||||||||| |||||||||| |||| ||||| || |||||| AATGCTGCAG GCAGAGGTAC ATGTCAGACT GGTGATTGTG GTGGAGTCTT ACAGTGTACC 120 GGGTGGGGCA AACCACCAAA CACCCTGGCC GAGTACGCCT TGGACCAGTT TAGCAACCTA 11773 || ||||||| |||| ||||| |||||| ||| |||||||||| |||||||||| ||||||| || GGATGGGGCA AACCCCCAAA CACCCTAGCC GAGTACGCCT TGGACCAGTT TAGCAACTTA 180 GATTTCTGGG ACATTTCTTT AGTCGATGGA TTTAATATTC CAATGACTTT CGCCCCGACC 11713 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| || GATTTTTGGG ACATTTCTTT AGTCGATGGA TTTAATATTC CAATGACTTT TGCCCCAACA 240 AATCCTAGTG GAGGGAAATG CCATGCAATT CATTGTACGG CTAATATAAA TGGTGAATGT 11653 || ||||||| |||| ||||| || |||||| ||||| |||| | |||||||| |||||||||| AAACCTAGTG GAGGAAAATG TCACGCAATT CATTGCACGG CCAATATAAA TGGTGAATGT 300 CCTGGTTCAC TTAGGGTACC CGGAGGATGT AACAATCCTT GTACCACGTT CGGAGGACAA 11593 ||| | | | ||| |||||| ||||||||| ||||| |||| |||||||||| ||||||||| CCTCGCGCCC TTAAGGTACC TGGAGGATGT AACAACCCTT GTACCACGTT TGGAGGACAA 360 CAATATTGTT GCACACAAGG TCCATGTGGC CCTACTGATT TGTCGAGATT TTTCAAACAA 11533 |||||||||| |||| ||||| |||||||||| ||||| || | |||| | ||| |||||| || CAATATTGTT GCACCCAAGG TCCATGTGGC CCTACAGAGT TGTCCAAATT TTTCAAGAAA 420 AGATGTCCTG ATGCGTATAG CTACCCACAA GATGATCCTA CTAGCACATT TACTTGCCCT 11473 |||||||| | |||| ||||| |||||||||| || ||||||| | |||||||| |||||||||| AGATGTCCCG ATGCTTATAG CTACCCACAA GACGATCCTA CAAGCACATT TACTTGCCCT 480 AGTGGTAGTA CAAATTATA 11454 ||||||||| |||| |||| GGTGGTAGTA CAAACTATA 499 hqPGS_C08HBa0235H18.1-_SGN-E200099+ (11952 11454) ******************************************************************************** EST sequence 1163 +strand 415 n (File: SGN-E275197+) 1 CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC 61 CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC 121 GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG AAAATGTCAC 181 GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA GGTACCTGGA 241 GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC CCAAGGTCCA 301 TGTGGCCCTA CAGAGTTGTC CAAATTTTTC AAGAAAAGAT GTCCCGATGC TTATAGCTAC 361 CCACAAGACG ATCCTACAAG CACATTTACT TGCCCTGGTG GTAGTACAAA CTATA Predicted gene structure (within gDNA segment 13035 to 10673): Exon 1 11868 11454 ( 415 n); cDNA 1 415 ( 415 n); score: 0.908 MATCH C08HBa0235H18.1- SGN-E275197+ 0.908 415 1.000 C PGS_C08HBa0235H18.1-_SGN-E275197+ (11868 11454) Alignment (genomic DNA sequence = upper lines): CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC ACCAAACACC 11809 |||||||||| |||||||||| ||||| || |||||||| | |||||||||| ||||||||| CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC 60 CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT TTCTTTAGTC 11749 || ||||||| |||||||||| |||||||||| ||| |||||| | |||||||| |||||||||| CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC 120 GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG GAAATGCCAT 11689 |||||||||| |||||||||| |||||| ||| || || || | |||||||||| ||||| || GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG AAAATGTCAC 180 GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG GGTACCCGGA 11629 |||||||||| | ||||| || |||||||||| ||||||||| | | |||| |||||| ||| GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA GGTACCTGGA 240 GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT ATTGTTGCAC ACAAGGTCCA 11569 |||||||||| | |||||||| |||||| ||| |||||||||| |||||||||| ||||||||| GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC CCAAGGTCCA 300 TGTGGCCCTA CTGATTTGTC GAGATTTTTC AAACAAAGAT GTCCTGATGC GTATAGCTAC 11509 |||||||||| | || ||||| | ||||||| || |||||| |||| ||||| ||||||||| TGTGGCCCTA CAGAGTTGTC CAAATTTTTC AAGAAAAGAT GTCCCGATGC TTATAGCTAC 360 CCACAAGATG ATCCTACTAG CACATTTACT TGCCCTAGTG GTAGTACAAA TTATA 11454 |||||||| | ||||||| || |||||||||| |||||| ||| |||||||||| |||| CCACAAGACG ATCCTACAAG CACATTTACT TGCCCTGGTG GTAGTACAAA CTATA 415 hqPGS_C08HBa0235H18.1-_SGN-E275197+ (11868 11454) ******************************************************************************** EST sequence 678 +strand 597 n (File: SGN-E253886+) 1 GCCACTATTG AGGTACGCAA CAACTGTCCA TACACCGTTT GGGCGGCATC GACTCCGATA 61 GGCGGTGGTC GACGTCTCAA TCGAGGCCAA ACATGGGTCA TCAATGCTCC GAGGGGAACT 121 AATATGGCAC GTATATGGGG TCGTACTGGT TGCAACTTTA ATGCTGCAGG CAGAGGTACA 181 TGTCAGACTG GTGATTGTGG TGGAGTCTTA CAGTGTACCG GATGGGGCAA ACCCCCAAAC 241 ACCCTAGCCG AGTACGCCTT GGACCAGTTT AGCAACTTAG ATTTTTGGGA CATTTCTTTA 301 GTCGATGGAT TTAATATTCC AATGACTTTT GCCCCAACAA AACCTAATGG AGGAAAATGT 361 CACGCAATTC ATTGCACGGC CAATATAAAT GGTGAATGTC CTCGCGCCCT TAAGGTACCT 421 GGAGGATGTA ACAACCCTTG TACCACGTTT GGAGGACAAC AATATTGTTG CACCCAAGGT 481 CCATGTGGCC CTACAGAGTT GTGCAAATTC TTCAAGAAAA GATGTCCCGA TGCTTATAGC 541 TACCCACAAG ACGATCCTAC AAGCACATTT ACTTGCCCTG GTGGTAGTAC AAACTAT Predicted gene structure (within gDNA segment 13164 to 10683): Exon 1 12051 11455 ( 597 n); cDNA 1 597 ( 597 n); score: 0.899 MATCH C08HBa0235H18.1- SGN-E253886+ 0.899 597 1.000 C PGS_C08HBa0235H18.1-_SGN-E253886+ (12051 11455) Alignment (genomic DNA sequence = upper lines): GCCACTTTCG AGGTACGCAA CAACTGTCCA TACACCGTCT GGGCGGCGTC GACCCCAATA 11992 |||||| | | |||||||||| |||||||||| |||||||| | ||||||| || ||| || ||| GCCACTATTG AGGTACGCAA CAACTGTCCA TACACCGTTT GGGCGGCATC GACTCCGATA 60 GGCGGTGGTC GACGTCTTGA TCGAGGCCAA ACATGGGTCA TCAATGCACC GAGGGGCACT 11932 |||||||||| ||||||| | |||||||||| |||||||||| ||||||| || |||||| ||| GGCGGTGGTC GACGTCTCAA TCGAGGCCAA ACATGGGTCA TCAATGCTCC GAGGGGAACT 120 AAGATGGCAC GTATATGGGG TCGTACGAAT TGCAACTTTG ATGGTGCTGG TAGAGGTTCA 11872 || ||||||| |||||||||| |||||| | ||||||||| ||| ||| || |||||| || AATATGGCAC GTATATGGGG TCGTACTGGT TGCAACTTTA ATGCTGCAGG CAGAGGTACA 180 TGTCAGACTG GTGATTGTGG TGGGGTCTTG CAATGTACCG GGTGGGGCAA ACCACCAAAC 11812 |||||||||| |||||||||| ||| ||||| || ||||||| | |||||||| ||| |||||| TGTCAGACTG GTGATTGTGG TGGAGTCTTA CAGTGTACCG GATGGGGCAA ACCCCCAAAC 240 ACCCTGGCCG AGTACGCCTT GGACCAGTTT AGCAACCTAG ATTTCTGGGA CATTTCTTTA 11752 ||||| |||| |||||||||| |||||||||| |||||| ||| |||| ||||| |||||||||| ACCCTAGCCG AGTACGCCTT GGACCAGTTT AGCAACTTAG ATTTTTGGGA CATTTCTTTA 300 GTCGATGGAT TTAATATTCC AATGACTTTC GCCCCGACCA ATCCTAGTGG AGGGAAATGC 11692 |||||||||| |||||||||| ||||||||| ||||| || | | |||| ||| ||| ||||| GTCGATGGAT TTAATATTCC AATGACTTTT GCCCCAACAA AACCTAATGG AGGAAAATGT 360 CATGCAATTC ATTGTACGGC TAATATAAAT GGTGAATGTC CTGGTTCACT TAGGGTACCC 11632 || ||||||| |||| ||||| ||||||||| |||||||||| || | | || || |||||| CACGCAATTC ATTGCACGGC CAATATAAAT GGTGAATGTC CTCGCGCCCT TAAGGTACCT 420 GGAGGATGTA ACAATCCTTG TACCACGTTC GGAGGACAAC AATATTGTTG CACACAAGGT 11572 |||||||||| |||| ||||| ||||||||| |||||||||| |||||||||| ||| |||||| GGAGGATGTA ACAACCCTTG TACCACGTTT GGAGGACAAC AATATTGTTG CACCCAAGGT 480 CCATGTGGCC CTACTGATTT GTCGAGATTT TTCAAACAAA GATGTCCTGA TGCGTATAGC 11512 |||||||||| |||| || || || | ||| ||||| ||| ||||||| || ||| |||||| CCATGTGGCC CTACAGAGTT GTGCAAATTC TTCAAGAAAA GATGTCCCGA TGCTTATAGC 540 TACCCACAAG ATGATCCTAC TAGCACATTT ACTTGCCCTA GTGGTAGTAC AAATTAT 11455 |||||||||| | |||||||| ||||||||| ||||||||| |||||||||| ||| ||| TACCCACAAG ACGATCCTAC AAGCACATTT ACTTGCCCTG GTGGTAGTAC AAACTAT 597 hqPGS_C08HBa0235H18.1-_SGN-E253886+ (12051 11455) ******************************************************************************** EST sequence 794 +strand 415 n (File: SGN-E206043+) 1 TGATTGTGGT GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAACA CCCTAGCCGA 61 GTACGCCTTG GACCAGTTTA GCAACTTAGA TTTTTGGGAC ATTTCTTTAG TCGATGGATT 121 TAATANTTNC TTGGTTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG GAAAATGTCA 181 CGCAATTCAT TGCACGGCCA ATATAAATGG TGAATGTCCT CGCGCCCTTA AGGTACCTGG 241 AGGATGTAAC AACCCTTGTA CCACGTTTGG AGGACAACAA TATTGTTGCA CCCAAGGTCC 301 ATGTGGCCCT ACAGAGTTGT CCAAATTTTT CAAGAAAAGA TGTCCCGATG CTTATAGCTA 361 CCCACAAGAC GATCCTACAA GCACATTTAC TTGCCCTGGT GGTAGTACAA ACTAT Predicted gene structure (within gDNA segment 12955 to 10683): Exon 1 11860 11455 ( 406 n); cDNA 1 415 ( 415 n); score: 0.851 MATCH C08HBa0235H18.1- SGN-E206043+ 0.851 406 0.978 C PGS_C08HBa0235H18.1-_SGN-E206043+ (11860 11455) Alignment (genomic DNA sequence = upper lines): TGATTGTGGT GGGGTCTTGC AATGTACCGG GTGGGGCAAA CCACCAAACA CCCTGGCCGA 11801 |||||||||| || ||||| | | |||||||| ||||||||| || ||||||| |||| ||||| TGATTGTGGT GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAACA CCCTAGCCGA 60 GTACGCCTTG GACCAGTTTA GCAACCTAGA TTTCTGGGAC ATTTCTTTAG TCGATGGATT 11741 |||||||||| |||||||||| ||||| |||| ||| |||||| |||||||||| |||||||||| GTACGCCTTG GACCAGTTTA GCAACTTAGA TTTTTGGGAC ATTTCTTTAG TCGATGGATT 120 TAATA----- ----TTCCAA TGACTTTCGC CCCGACCAAT CCTAGTGGAG GGAAATGCCA 11690 ||||| |||||| ||||||| || ||| || || |||||||||| | ||||| || TAATANTTNC TTGGTTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG GAAAATGTCA 180 TGCAATTCAT TGTACGGCTA ATATAAATGG TGAATGTCCT GGTTCACTTA GGGTACCCGG 11630 ||||||||| || ||||| | |||||||||| |||||||||| | | |||| |||||| || CGCAATTCAT TGCACGGCCA ATATAAATGG TGAATGTCCT CGCGCCCTTA AGGTACCTGG 240 AGGATGTAAC AATCCTTGTA CCACGTTCGG AGGACAACAA TATTGTTGCA CACAAGGTCC 11570 |||||||||| || ||||||| ||||||| || |||||||||| |||||||||| | |||||||| AGGATGTAAC AACCCTTGTA CCACGTTTGG AGGACAACAA TATTGTTGCA CCCAAGGTCC 300 ATGTGGCCCT ACTGATTTGT CGAGATTTTT CAAACAAAGA TGTCCTGATG CGTATAGCTA 11510 |||||||||| || || |||| | | |||||| ||| ||||| ||||| |||| | |||||||| ATGTGGCCCT ACAGAGTTGT CCAAATTTTT CAAGAAAAGA TGTCCCGATG CTTATAGCTA 360 CCCACAAGAT GATCCTACTA GCACATTTAC TTGCCCTAGT GGTAGTACAA ATTAT 11455 ||||||||| |||||||| | |||||||||| ||||||| || |||||||||| | ||| CCCACAAGAC GATCCTACAA GCACATTTAC TTGCCCTGGT GGTAGTACAA ACTAT 415 hqPGS_C08HBa0235H18.1-_SGN-E206043+ (11860 11455) ******************************************************************************** EST sequence 996 +strand 327 n (File: SGN-E207626+) 1 AGCAACTTAG ATTTTTGGGA CATTTCTTTA GTCGATGGAT TTAATATTCC AATGACTTTT 61 GCCCCAACAA AACCTAGTGG AGGAAAATGT CACGCAATTC ATTGCACGGC CAATATAAAT 121 GGTGAATGTC CTCGCGCCCT TAAGGTACCT GGAGGATGTA ACAACCCTTG TACCACGTTT 181 GGAGGACAAC AATATTGTTG CACCCAAGGT CCATGTGGCC CTACAGAGTT GTCCAAATTT 241 TTCAAGAAAA GATGTCCCGA TGCTTATAGC TACCCACAAG ACGATCCTAC AAGCACATTT 301 ACTTGCCCTG GTGGTAGTAC AAACTAT Predicted gene structure (within gDNA segment 12516 to 10683): Exon 1 11781 11455 ( 327 n); cDNA 1 327 ( 327 n); score: 0.902 MATCH C08HBa0235H18.1- SGN-E207626+ 0.902 327 1.000 C PGS_C08HBa0235H18.1-_SGN-E207626+ (11781 11455) Alignment (genomic DNA sequence = upper lines): AGCAACCTAG ATTTCTGGGA CATTTCTTTA GTCGATGGAT TTAATATTCC AATGACTTTC 11722 |||||| ||| |||| ||||| |||||||||| |||||||||| |||||||||| ||||||||| AGCAACTTAG ATTTTTGGGA CATTTCTTTA GTCGATGGAT TTAATATTCC AATGACTTTT 60 GCCCCGACCA ATCCTAGTGG AGGGAAATGC CATGCAATTC ATTGTACGGC TAATATAAAT 11662 ||||| || | | |||||||| ||| ||||| || ||||||| |||| ||||| ||||||||| GCCCCAACAA AACCTAGTGG AGGAAAATGT CACGCAATTC ATTGCACGGC CAATATAAAT 120 GGTGAATGTC CTGGTTCACT TAGGGTACCC GGAGGATGTA ACAATCCTTG TACCACGTTC 11602 |||||||||| || | | || || |||||| |||||||||| |||| ||||| ||||||||| GGTGAATGTC CTCGCGCCCT TAAGGTACCT GGAGGATGTA ACAACCCTTG TACCACGTTT 180 GGAGGACAAC AATATTGTTG CACACAAGGT CCATGTGGCC CTACTGATTT GTCGAGATTT 11542 |||||||||| |||||||||| ||| |||||| |||||||||| |||| || || ||| | |||| GGAGGACAAC AATATTGTTG CACCCAAGGT CCATGTGGCC CTACAGAGTT GTCCAAATTT 240 TTCAAACAAA GATGTCCTGA TGCGTATAGC TACCCACAAG ATGATCCTAC TAGCACATTT 11482 ||||| ||| ||||||| || ||| |||||| |||||||||| | |||||||| ||||||||| TTCAAGAAAA GATGTCCCGA TGCTTATAGC TACCCACAAG ACGATCCTAC AAGCACATTT 300 ACTTGCCCTA GTGGTAGTAC AAATTAT 11455 ||||||||| |||||||||| ||| ||| ACTTGCCCTG GTGGTAGTAC AAACTAT 327 hqPGS_C08HBa0235H18.1-_SGN-E207626+ (11781 11455) ******************************************************************************** EST sequence 596 +strand 598 n (File: SGN-E253452+) 1 CTGCCACTAT TGAGGTACGC AACAACTGTC CATACACCGT TTGGGCGGCA TCGACTCCGA 61 TAGGCGGTGG TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA 121 CTAAGATGGC ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA 181 CATGTCAGAC TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA 241 ACACCCTAGC CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT 301 TAGTCGATGG ATTTAATATT CCAATGACTT TTGCCCCAAC AAAACCTAGT GGAGGAAAAT 361 GTCACGCAAT TCATTGCACG GCCAATATAA ATGGTGAATG TCCTCGCGCC CTTAAGGTAC 421 CTGGAGGATG TAACAACCCT TGTACCACGT TTGGAGGACA ACAATATTGT TGCACCCAAG 481 GTCCATGTGG CCCTACAGAG TTGTCCAAAT TTTTCAAGAA AAGATGTCCC GATGCTTATA 541 GCTACCCACA AGACGATCCT ACAAGCACAT TTACTTGCCC TGGTGGTAGT ACAAACTA Predicted gene structure (within gDNA segment 13184 to 10693): Exon 1 12053 11456 ( 598 n); cDNA 1 598 ( 598 n); score: 0.906 MATCH C08HBa0235H18.1- SGN-E253452+ 0.906 598 1.000 C PGS_C08HBa0235H18.1-_SGN-E253452+ (12053 11456) Alignment (genomic DNA sequence = upper lines): CTGCCACTTT CGAGGTACGC AACAACTGTC CATACACCGT CTGGGCGGCG TCGACCCCAA 11994 |||||||| | ||||||||| |||||||||| |||||||||| |||||||| ||||| || | CTGCCACTAT TGAGGTACGC AACAACTGTC CATACACCGT TTGGGCGGCA TCGACTCCGA 60 TAGGCGGTGG TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA CCGAGGGGCA 11934 |||||||||| ||||||||| ||||||||| |||||||||| ||||||||| |||||||| | TAGGCGGTGG TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA 120 CTAAGATGGC ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT GGTAGAGGTT 11874 |||||||||| |||||||||| |||||||| ||||||||| | ||| ||| || |||||| CTAAGATGGC ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA 180 CATGTCAGAC TGGTGATTGT GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA 11814 |||||||||| |||||||||| ||||| |||| | || ||||| ||| |||||| ||||| |||| CATGTCAGAC TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA 240 ACACCCTGGC CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT 11754 ||||||| || |||||||||| |||||||||| |||||||| | |||||| ||| |||||||||| ACACCCTAGC CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT 300 TAGTCGATGG ATTTAATATT CCAATGACTT TCGCCCCGAC CAATCCTAGT GGAGGGAAAT 11694 |||||||||| |||||||||| |||||||||| | ||||| || || |||||| ||||| |||| TAGTCGATGG ATTTAATATT CCAATGACTT TTGCCCCAAC AAAACCTAGT GGAGGAAAAT 360 GCCATGCAAT TCATTGTACG GCTAATATAA ATGGTGAATG TCCTGGTTCA CTTAGGGTAC 11634 | || ||||| |||||| ||| || ||||||| |||||||||| |||| | | |||| ||||| GTCACGCAAT TCATTGCACG GCCAATATAA ATGGTGAATG TCCTCGCGCC CTTAAGGTAC 420 CCGGAGGATG TAACAATCCT TGTACCACGT TCGGAGGACA ACAATATTGT TGCACACAAG 11574 | |||||||| |||||| ||| |||||||||| | |||||||| |||||||||| ||||| |||| CTGGAGGATG TAACAACCCT TGTACCACGT TTGGAGGACA ACAATATTGT TGCACCCAAG 480 GTCCATGTGG CCCTACTGAT TTGTCGAGAT TTTTCAAACA AAGATGTCCT GATGCGTATA 11514 |||||||||| |||||| || ||||| | || ||||||| | ||||||||| ||||| |||| GTCCATGTGG CCCTACAGAG TTGTCCAAAT TTTTCAAGAA AAGATGTCCC GATGCTTATA 540 GCTACCCACA AGATGATCCT ACTAGCACAT TTACTTGCCC TAGTGGTAGT ACAAATTA 11456 |||||||||| ||| |||||| || ||||||| |||||||||| | |||||||| ||||| || GCTACCCACA AGACGATCCT ACAAGCACAT TTACTTGCCC TGGTGGTAGT ACAAACTA 598 hqPGS_C08HBa0235H18.1-_SGN-E253452+ (12053 11456) ******************************************************************************** EST sequence 967 +strand 645 n (File: SGN-E276677+) 1 CATCTTCTTT TGTTCTCTTC TTCCTTCTTT GTGTGACTTA TACTTATGCT GCCACTATTG 61 AGGTACGCAA CAACTGTCCA TACACCGTTT GGGCGGCATC GACTCCGATA GGCGGTGGTC 121 GACGTCTCAA TCGAGGCCAA ACATGGGTCA TCAATGCTCC GAGGGGAACT AAGATGGCAC 181 GTATATGGGG TCGTACTGGT TGCAACTTTA ATGCTGCAGG CAGAGGTACA TGTCAGACTG 241 GTGATTGTGG TGGAGTCTTA CAGTGTACCG GATGGGGCAA ACCCCCAAAC ACCCTAGCCG 301 AGTACGCCTT GGACCAGTTT AGCAACTTAG ATTTTTGGGA CATTTCTTTA GTCGATGGAT 361 TTAATATTCC AATGACTTTT GCCCCAACAA AACCTAGTGG AGGAAAATGT CACGCAATTC 421 ATTGCACGGC CAATATAAAT GGTGAATGTC CTCGCGCCCT TAAGGTACCT GGAGGATGTA 481 ACAACCCTTG TACCACGTTT GGAGGACAAC AATATTGTTG CACCCAAGGT CCATGTGGCC 541 CTACAGAGTT GTCCAAATTT TTCAAGAAAA GATGTCCCGA TGCTTATAGC TACCCACAAG 601 ACGATCCTAC AAGCACATTT ACTTGCCCTG GTGGTAGTAC AAACT Predicted gene structure (within gDNA segment 13664 to 10703): Exon 1 12100 11459 ( 642 n); cDNA 2 643 ( 642 n); score: 0.903 MATCH C08HBa0235H18.1- SGN-E276677+ 0.903 642 0.995 C PGS_C08HBa0235H18.1-_SGN-E276677+ (12100 11459) Alignment (genomic DNA sequence = upper lines): ATCTTCTTTT GTTTTCTTCC TTCTTGCTTT TGTGACTTAC ACTTATGCTG CCACTTTCGA 12041 |||||||||| ||| ||||| | ||| || ||||||||| |||||||||| ||||| | || ATCTTCTTTT GTTCTCTTCT TCCTTCTTTG TGTGACTTAT ACTTATGCTG CCACTATTGA 61 GGTACGCAAC AACTGTCCAT ACACCGTCTG GGCGGCGTCG ACCCCAATAG GCGGTGGTCG 11981 |||||||||| |||||||||| ||||||| || |||||| ||| || || |||| |||||||||| GGTACGCAAC AACTGTCCAT ACACCGTTTG GGCGGCATCG ACTCCGATAG GCGGTGGTCG 121 ACGTCTTGAT CGAGGCCAAA CATGGGTCAT CAATGCACCG AGGGGCACTA AGATGGCACG 11921 |||||| || |||||||||| |||||||||| |||||| ||| ||||| |||| |||||||||| ACGTCTCAAT CGAGGCCAAA CATGGGTCAT CAATGCTCCG AGGGGAACTA AGATGGCACG 181 TATATGGGGT CGTACGAATT GCAACTTTGA TGGTGCTGGT AGAGGTTCAT GTCAGACTGG 11861 |||||||||| ||||| || |||||||| | || ||| || |||||| ||| |||||||||| TATATGGGGT CGTACTGGTT GCAACTTTAA TGCTGCAGGC AGAGGTACAT GTCAGACTGG 241 TGATTGTGGT GGGGTCTTGC AATGTACCGG GTGGGGCAAA CCACCAAACA CCCTGGCCGA 11801 |||||||||| || ||||| | | |||||||| ||||||||| || ||||||| |||| ||||| TGATTGTGGT GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAACA CCCTAGCCGA 301 GTACGCCTTG GACCAGTTTA GCAACCTAGA TTTCTGGGAC ATTTCTTTAG TCGATGGATT 11741 |||||||||| |||||||||| ||||| |||| ||| |||||| |||||||||| |||||||||| GTACGCCTTG GACCAGTTTA GCAACTTAGA TTTTTGGGAC ATTTCTTTAG TCGATGGATT 361 TAATATTCCA ATGACTTTCG CCCCGACCAA TCCTAGTGGA GGGAAATGCC ATGCAATTCA 11681 |||||||||| |||||||| | |||| || || ||||||||| || ||||| | | |||||||| TAATATTCCA ATGACTTTTG CCCCAACAAA ACCTAGTGGA GGAAAATGTC ACGCAATTCA 421 TTGTACGGCT AATATAAATG GTGAATGTCC TGGTTCACTT AGGGTACCCG GAGGATGTAA 11621 ||| ||||| |||||||||| |||||||||| | | | ||| | |||||| | |||||||||| TTGCACGGCC AATATAAATG GTGAATGTCC TCGCGCCCTT AAGGTACCTG GAGGATGTAA 481 CAATCCTTGT ACCACGTTCG GAGGACAACA ATATTGTTGC ACACAAGGTC CATGTGGCCC 11561 ||| |||||| |||||||| | |||||||||| |||||||||| || ||||||| |||||||||| CAACCCTTGT ACCACGTTTG GAGGACAACA ATATTGTTGC ACCCAAGGTC CATGTGGCCC 541 TACTGATTTG TCGAGATTTT TCAAACAAAG ATGTCCTGAT GCGTATAGCT ACCCACAAGA 11501 ||| || ||| || | ||||| |||| |||| |||||| ||| || ||||||| |||||||||| TACAGAGTTG TCCAAATTTT TCAAGAAAAG ATGTCCCGAT GCTTATAGCT ACCCACAAGA 601 TGATCCTACT AGCACATTTA CTTGCCCTAG TGGTAGTACA AA 11459 |||||||| |||||||||| |||||||| | |||||||||| || CGATCCTACA AGCACATTTA CTTGCCCTGG TGGTAGTACA AA 643 hqPGS_C08HBa0235H18.1-_SGN-E276677+ (12100 11459) ******************************************************************************** EST sequence 1127 +strand 645 n (File: SGN-E209968+) 1 CATCTTCTTT TGTTCTCTTC TTCCTTCTTT GTGTGACTTA TACTTATGCT GCCACTATTG 61 AGGTACGCAA CAACTGTCCA TACACCGTTT GGGCGGCATC GACTCCGATA GGCGGTGGTC 121 GACGTCTCAA TCGAGGCCAA ACATGGGTCA TCAATGCTCC GAGGGGAACT AAGATGGCAC 181 GTATATGGGG TCGTACTGGT TGCAACTTTA ATGCTGCAGG CAGAGGTACA TGTCAGACTG 241 GTGATTGTGG TGGAGTCTTA CAGTGTACCG GATGGGGCAA ACCCCCAAAC ACCCTAGCCG 301 AGTACGCCTT GGACCAGTTT AGCAACTTAG ATTTTTGGGA CATTTCTTTA GTCGATGGAT 361 TTAATATTCC AATGACTTTT GCCCCAACAA AACCTAGTGG AGGAAAATGT CACGCAATTC 421 ATTGCACGGC CAATATAAAT GGTGAATGTC CTCGCGCCCT TAAGGTACCT GGAGGATGTA 481 ACAACCCTTG TACCACGTTT GGAGGACAAC AATATTGTTG CACCCAAGGT CCATGTGGCC 541 CTACAGAGTT GTCCAAATTT TTCAAGAAAA GATGTCCCGA TGCTTATAGC TACCCACAAG 601 ACGATCCTAC AAGCACATTT ACTTGCCCTG GTGGTAGTAC AAACT Predicted gene structure (within gDNA segment 13664 to 10703): Exon 1 12100 11459 ( 642 n); cDNA 2 643 ( 642 n); score: 0.903 MATCH C08HBa0235H18.1- SGN-E209968+ 0.903 642 0.995 C PGS_C08HBa0235H18.1-_SGN-E209968+ (12100 11459) Alignment (genomic DNA sequence = upper lines): ATCTTCTTTT GTTTTCTTCC TTCTTGCTTT TGTGACTTAC ACTTATGCTG CCACTTTCGA 12041 |||||||||| ||| ||||| | ||| || ||||||||| |||||||||| ||||| | || ATCTTCTTTT GTTCTCTTCT TCCTTCTTTG TGTGACTTAT ACTTATGCTG CCACTATTGA 61 GGTACGCAAC AACTGTCCAT ACACCGTCTG GGCGGCGTCG ACCCCAATAG GCGGTGGTCG 11981 |||||||||| |||||||||| ||||||| || |||||| ||| || || |||| |||||||||| GGTACGCAAC AACTGTCCAT ACACCGTTTG GGCGGCATCG ACTCCGATAG GCGGTGGTCG 121 ACGTCTTGAT CGAGGCCAAA CATGGGTCAT CAATGCACCG AGGGGCACTA AGATGGCACG 11921 |||||| || |||||||||| |||||||||| |||||| ||| ||||| |||| |||||||||| ACGTCTCAAT CGAGGCCAAA CATGGGTCAT CAATGCTCCG AGGGGAACTA AGATGGCACG 181 TATATGGGGT CGTACGAATT GCAACTTTGA TGGTGCTGGT AGAGGTTCAT GTCAGACTGG 11861 |||||||||| ||||| || |||||||| | || ||| || |||||| ||| |||||||||| TATATGGGGT CGTACTGGTT GCAACTTTAA TGCTGCAGGC AGAGGTACAT GTCAGACTGG 241 TGATTGTGGT GGGGTCTTGC AATGTACCGG GTGGGGCAAA CCACCAAACA CCCTGGCCGA 11801 |||||||||| || ||||| | | |||||||| ||||||||| || ||||||| |||| ||||| TGATTGTGGT GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAACA CCCTAGCCGA 301 GTACGCCTTG GACCAGTTTA GCAACCTAGA TTTCTGGGAC ATTTCTTTAG TCGATGGATT 11741 |||||||||| |||||||||| ||||| |||| ||| |||||| |||||||||| |||||||||| GTACGCCTTG GACCAGTTTA GCAACTTAGA TTTTTGGGAC ATTTCTTTAG TCGATGGATT 361 TAATATTCCA ATGACTTTCG CCCCGACCAA TCCTAGTGGA GGGAAATGCC ATGCAATTCA 11681 |||||||||| |||||||| | |||| || || ||||||||| || ||||| | | |||||||| TAATATTCCA ATGACTTTTG CCCCAACAAA ACCTAGTGGA GGAAAATGTC ACGCAATTCA 421 TTGTACGGCT AATATAAATG GTGAATGTCC TGGTTCACTT AGGGTACCCG GAGGATGTAA 11621 ||| ||||| |||||||||| |||||||||| | | | ||| | |||||| | |||||||||| TTGCACGGCC AATATAAATG GTGAATGTCC TCGCGCCCTT AAGGTACCTG GAGGATGTAA 481 CAATCCTTGT ACCACGTTCG GAGGACAACA ATATTGTTGC ACACAAGGTC CATGTGGCCC 11561 ||| |||||| |||||||| | |||||||||| |||||||||| || ||||||| |||||||||| CAACCCTTGT ACCACGTTTG GAGGACAACA ATATTGTTGC ACCCAAGGTC CATGTGGCCC 541 TACTGATTTG TCGAGATTTT TCAAACAAAG ATGTCCTGAT GCGTATAGCT ACCCACAAGA 11501 ||| || ||| || | ||||| |||| |||| |||||| ||| || ||||||| |||||||||| TACAGAGTTG TCCAAATTTT TCAAGAAAAG ATGTCCCGAT GCTTATAGCT ACCCACAAGA 601 TGATCCTACT AGCACATTTA CTTGCCCTAG TGGTAGTACA AA 11459 |||||||| |||||||||| |||||||| | |||||||||| || CGATCCTACA AGCACATTTA CTTGCCCTGG TGGTAGTACA AA 643 hqPGS_C08HBa0235H18.1-_SGN-E209968+ (12100 11459) ******************************************************************************** EST sequence 669 +strand 595 n (File: SGN-E254383+) 1 GCCACTATTG AGGTACGCAA CAACTGTCCA TACACCGTTT GGGCGGCATC GACTCCGATA 61 GGCGGTGGTC GACGTCTCAA TCGAGGCCAA ACATGGGTCA TCAATGCTCC GAGGGGAACT 121 AAGATGGCAC GTATATGGGG TCGTACTGGT TGCAACTTTA ATGCTGCAGG CAGAGGTACA 181 TGTCAGACTG GTGATTGTGG TGGAGTCTTA CAGTGTACCG GATGGGGCAA ACCCCCAAAC 241 ACCCTAGCCG AGTACGCCTT GGACCAGTTT AGCAACTTAG ATTTTTGGGA CATTTCTTTA 301 GTCGATGGAT TTAATATTCC AATGACTTTT GCCCCAACAA AACCTAGTGG AGGAAAATGT 361 CACGCAATTC ATTGCACGGC CAATATAAAT GGTGAATGTC CTCGCGCCCT TAAGGTACCT 421 GGAGGATGTA ACAACCCTTG TACCACGTTT GGAGGACAAC AATATTGTTG CACCCAAGGT 481 CCATGTGGCC CTACAGAGTT GTCCAAATTT TTCAAGAAAA GATGTCCCGA TGCTTATAGC 541 TACCCACAAG ACGATCCTAC AAGCACATTT ACTTGCCCTG GTGGTAGTAC AAACT Predicted gene structure (within gDNA segment 13164 to 10703): Exon 1 12051 11459 ( 593 n); cDNA 1 593 ( 593 n); score: 0.907 MATCH C08HBa0235H18.1- SGN-E254383+ 0.907 593 0.997 C PGS_C08HBa0235H18.1-_SGN-E254383+ (12051 11459) Alignment (genomic DNA sequence = upper lines): GCCACTTTCG AGGTACGCAA CAACTGTCCA TACACCGTCT GGGCGGCGTC GACCCCAATA 11992 |||||| | | |||||||||| |||||||||| |||||||| | ||||||| || ||| || ||| GCCACTATTG AGGTACGCAA CAACTGTCCA TACACCGTTT GGGCGGCATC GACTCCGATA 60 GGCGGTGGTC GACGTCTTGA TCGAGGCCAA ACATGGGTCA TCAATGCACC GAGGGGCACT 11932 |||||||||| ||||||| | |||||||||| |||||||||| ||||||| || |||||| ||| GGCGGTGGTC GACGTCTCAA TCGAGGCCAA ACATGGGTCA TCAATGCTCC GAGGGGAACT 120 AAGATGGCAC GTATATGGGG TCGTACGAAT TGCAACTTTG ATGGTGCTGG TAGAGGTTCA 11872 |||||||||| |||||||||| |||||| | ||||||||| ||| ||| || |||||| || AAGATGGCAC GTATATGGGG TCGTACTGGT TGCAACTTTA ATGCTGCAGG CAGAGGTACA 180 TGTCAGACTG GTGATTGTGG TGGGGTCTTG CAATGTACCG GGTGGGGCAA ACCACCAAAC 11812 |||||||||| |||||||||| ||| ||||| || ||||||| | |||||||| ||| |||||| TGTCAGACTG GTGATTGTGG TGGAGTCTTA CAGTGTACCG GATGGGGCAA ACCCCCAAAC 240 ACCCTGGCCG AGTACGCCTT GGACCAGTTT AGCAACCTAG ATTTCTGGGA CATTTCTTTA 11752 ||||| |||| |||||||||| |||||||||| |||||| ||| |||| ||||| |||||||||| ACCCTAGCCG AGTACGCCTT GGACCAGTTT AGCAACTTAG ATTTTTGGGA CATTTCTTTA 300 GTCGATGGAT TTAATATTCC AATGACTTTC GCCCCGACCA ATCCTAGTGG AGGGAAATGC 11692 |||||||||| |||||||||| ||||||||| ||||| || | | |||||||| ||| ||||| GTCGATGGAT TTAATATTCC AATGACTTTT GCCCCAACAA AACCTAGTGG AGGAAAATGT 360 CATGCAATTC ATTGTACGGC TAATATAAAT GGTGAATGTC CTGGTTCACT TAGGGTACCC 11632 || ||||||| |||| ||||| ||||||||| |||||||||| || | | || || |||||| CACGCAATTC ATTGCACGGC CAATATAAAT GGTGAATGTC CTCGCGCCCT TAAGGTACCT 420 GGAGGATGTA ACAATCCTTG TACCACGTTC GGAGGACAAC AATATTGTTG CACACAAGGT 11572 |||||||||| |||| ||||| ||||||||| |||||||||| |||||||||| ||| |||||| GGAGGATGTA ACAACCCTTG TACCACGTTT GGAGGACAAC AATATTGTTG CACCCAAGGT 480 CCATGTGGCC CTACTGATTT GTCGAGATTT TTCAAACAAA GATGTCCTGA TGCGTATAGC 11512 |||||||||| |||| || || ||| | |||| ||||| ||| ||||||| || ||| |||||| CCATGTGGCC CTACAGAGTT GTCCAAATTT TTCAAGAAAA GATGTCCCGA TGCTTATAGC 540 TACCCACAAG ATGATCCTAC TAGCACATTT ACTTGCCCTA GTGGTAGTAC AAA 11459 |||||||||| | |||||||| ||||||||| ||||||||| |||||||||| ||| TACCCACAAG ACGATCCTAC AAGCACATTT ACTTGCCCTG GTGGTAGTAC AAA 593 hqPGS_C08HBa0235H18.1-_SGN-E254383+ (12051 11459) ******************************************************************************** EST sequence 633 +strand 602 n (File: SGN-E303865+) 1 TTATACTTAT GCTGCCACTA TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC 61 ATCGACTCCG ATAGGCGGTG GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC 121 TCCGAGGGGA ACTAAGATGG CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC 181 AGGCAGAGGT ACATGTCAGA CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG 241 CAAACCCCCA AACACCCTAG CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG 301 GGACATTTCT TTAGTCGATG GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG 361 TGGAGGAAAA TGTCACGCAA TTCATTGCAC GGCCAATATA AATGGTGAAT GTCCTCGCGC 421 CCTTAAGGTA NCCTGGAGGA TGTAACAACC CTTGTACCAC GTTTGGAGGA CAACAATATT 481 GTTGCACCCA AGGTCCATGT GGCCCTACAG AGTTGTCCAA ATTTTTCAAG AAAAGATGTC 541 CCGATGCTTA TAGCTACCCA CAAGACGATC CTACAAGCAC ATTTACTTGC CCTGGTGGTA 601 GT Predicted gene structure (within gDNA segment 13294 to 10773): Exon 1 12064 11464 ( 601 n); cDNA 1 602 ( 602 n); score: 0.903 MATCH C08HBa0235H18.1- SGN-E303865+ 0.903 601 0.998 C PGS_C08HBa0235H18.1-_SGN-E303865+ (12064 11464) Alignment (genomic DNA sequence = upper lines): TTACACTTAT GCTGCCACTT TCGAGGTACG CAACAACTGT CCATACACCG TCTGGGCGGC 12005 ||| |||||| ||||||||| | |||||||| |||||||||| |||||||||| | |||||||| TTATACTTAT GCTGCCACTA TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC 60 GTCGACCCCA ATAGGCGGTG GTCGACGTCT TGATCGAGGC CAAACATGGG TCATCAATGC 11945 ||||| || |||||||||| |||||||||| |||||||| |||||||||| |||||||||| ATCGACTCCG ATAGGCGGTG GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC 120 ACCGAGGGGC ACTAAGATGG CACGTATATG GGGTCGTACG AATTGCAACT TTGATGGTGC 11885 |||||||| |||||||||| |||||||||| ||||||||| |||||||| || ||| ||| TCCGAGGGGA ACTAAGATGG CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC 180 TGGTAGAGGT TCATGTCAGA CTGGTGATTG TGGTGGGGTC TTGCAATGTA CCGGGTGGGG 11825 || |||||| ||||||||| |||||||||| |||||| ||| || || |||| |||| ||||| AGGCAGAGGT ACATGTCAGA CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG 240 CAAACCACCA AACACCCTGG CCGAGTACGC CTTGGACCAG TTTAGCAACC TAGATTTCTG 11765 |||||| ||| |||||||| | |||||||||| |||||||||| ||||||||| ||||||| || CAAACCCCCA AACACCCTAG CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG 300 GGACATTTCT TTAGTCGATG GATTTAATAT TCCAATGACT TTCGCCCCGA CCAATCCTAG 11705 |||||||||| |||||||||| |||||||||| |||||||||| || ||||| | | || ||||| GGACATTTCT TTAGTCGATG GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG 360 TGGAGGGAAA TGCCATGCAA TTCATTGTAC GGCTAATATA AATGGTGAAT GTCCTGGTTC 11645 |||||| ||| || || |||| ||||||| || ||| |||||| |||||||||| ||||| | | TGGAGGAAAA TGTCACGCAA TTCATTGCAC GGCCAATATA AATGGTGAAT GTCCTCGCGC 420 ACTTAGGGTA CCC-GGAGGA TGTAACAATC CTTGTACCAC GTTCGGAGGA CAACAATATT 11586 |||| |||| || |||||| |||||||| | |||||||||| ||| |||||| |||||||||| CCTTAAGGTA NCCTGGAGGA TGTAACAACC CTTGTACCAC GTTTGGAGGA CAACAATATT 480 GTTGCACACA AGGTCCATGT GGCCCTACTG ATTTGTCGAG ATTTTTCAAA CAAAGATGTC 11526 ||||||| || |||||||||| |||||||| | | ||||| | ||||||||| ||||||||| GTTGCACCCA AGGTCCATGT GGCCCTACAG AGTTGTCCAA ATTTTTCAAG AAAAGATGTC 540 CTGATGCGTA TAGCTACCCA CAAGATGATC CTACTAGCAC ATTTACTTGC CCTAGTGGTA 11466 | ||||| || |||||||||| ||||| |||| |||| ||||| |||||||||| ||| |||||| CCGATGCTTA TAGCTACCCA CAAGACGATC CTACAAGCAC ATTTACTTGC CCTGGTGGTA 600 GT 11464 || GT 602 hqPGS_C08HBa0235H18.1-_SGN-E303865+ (12064 11464) ******************************************************************************** EST sequence 1221 +strand 646 n (File: SGN-E294134+) 1 AAACATGGCC TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG TGACTTACAC 61 TTATGCTGCC ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG CGGCGTCGAC 121 CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG 181 GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG 241 AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC 301 ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT 361 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG 421 GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG 481 GGTACCCGGA GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT ATTGTTGCAC 541 ACAAGGTCCA TGTGGCCCTA CTGATTTGGC GAGATTTTTC AAACAAAGAT GTCCTGATGC 601 GTATAGCTAC CCACAAGATG ATCCTACTAG CACATTTACT TGCCCT Predicted gene structure (within gDNA segment 12718 to 10863): Exon 1 12118 11473 ( 646 n); cDNA 1 646 ( 646 n); score: 0.998 MATCH C08HBa0235H18.1- SGN-E294134+ 0.998 646 1.000 C PGS_C08HBa0235H18.1-_SGN-E294134+ (12118 11473) Alignment (genomic DNA sequence = upper lines): AAACATGGCC TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG TGACTTACAC 12059 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACATGGCC TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG TGACTTACAC 60 TTATGCTGCC ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG CGGCGTCGAC 11999 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTATGCTGCC ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG CGGCGTCGAC 120 CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG 11939 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG 180 GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG 11879 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG 240 AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC 11819 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC 300 ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT 11759 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT 360 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG 11699 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG 420 GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG 11639 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG 480 GGTACCCGGA GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT ATTGTTGCAC 11579 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTACCCGGA GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT ATTGTTGCAC 540 ACAAGGTCCA TGTGGCCCTA CTGATTTGTC GAGATTTTTC AAACAAAGAT GTCCTGATGC 11519 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| ACAAGGTCCA TGTGGCCCTA CTGATTTGGC GAGATTTTTC AAACAAAGAT GTCCTGATGC 600 GTATAGCTAC CCACAAGATG ATCCTACTAG CACATTTACT TGCCCT 11473 |||||||||| |||||||||| |||||||||| |||||||||| |||||| GTATAGCTAC CCACAAGATG ATCCTACTAG CACATTTACT TGCCCT 646 hqPGS_C08HBa0235H18.1-_SGN-E294134+ (12118 11473) ******************************************************************************** EST sequence 586 +strand 632 n (File: SGN-E302616+) 1 TGAGATCTTC TTTTGTTTTC TTCCTTCTTG CTTTTGTGAC TTACACTTAT GCTGCCACTT 61 TCGAGGTACG CAACAACTGT CCATACACCG TCTGGGCGGC GTCGACCCCA ATAGGCGGTG 121 GTCGACGTCT TGATCGAGGC CAAACATGGG TCATCAATGC ACCGAGGGGC ACTAAGATGG 181 CACGTATATG GGGTCGTACG AATTGCAACT TTGATGGTGC TGGTAGAGGT TCATGTCAGA 241 CTGGTGATTG TGGTGGGGTC TTGCAATGTA CCGGGTGGGG CAAACCACCA AACACCCTGG 301 CCGAGTACGC CTTGGACCAG TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG 361 GATTTAATAT TCCAATGACT TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA 421 TTCATTGTAC GGCTAATATA AATGGTGAAT GTCCTGGTTC ACTTAGGGTA CCCGGAGGAT 481 GTAACAATCC TTGTACCACG TTCGGAGGAC AACAATATTG TTGCACACAA GGTCCATGTG 541 GCCCTACTGA TTTGTCGGGA TTGTGCAAAC AGAGATGTCC TGATGCGTAT AGCTACCCAC 601 AGGATGATCC TACTAGCACA TTTACTTGCC CT Predicted gene structure (within gDNA segment 12704 to 10863): Exon 1 12104 11473 ( 632 n); cDNA 1 632 ( 632 n); score: 0.992 MATCH C08HBa0235H18.1- SGN-E302616+ 0.992 632 1.000 C PGS_C08HBa0235H18.1-_SGN-E302616+ (12104 11473) Alignment (genomic DNA sequence = upper lines): TGAGATCTTC TTTTGTTTTC TTCCTTCTTG CTTTTGTGAC TTACACTTAT GCTGCCACTT 12045 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAGATCTTC TTTTGTTTTC TTCCTTCTTG CTTTTGTGAC TTACACTTAT GCTGCCACTT 60 TCGAGGTACG CAACAACTGT CCATACACCG TCTGGGCGGC GTCGACCCCA ATAGGCGGTG 11985 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGAGGTACG CAACAACTGT CCATACACCG TCTGGGCGGC GTCGACCCCA ATAGGCGGTG 120 GTCGACGTCT TGATCGAGGC CAAACATGGG TCATCAATGC ACCGAGGGGC ACTAAGATGG 11925 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCGACGTCT TGATCGAGGC CAAACATGGG TCATCAATGC ACCGAGGGGC ACTAAGATGG 180 CACGTATATG GGGTCGTACG AATTGCAACT TTGATGGTGC TGGTAGAGGT TCATGTCAGA 11865 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACGTATATG GGGTCGTACG AATTGCAACT TTGATGGTGC TGGTAGAGGT TCATGTCAGA 240 CTGGTGATTG TGGTGGGGTC TTGCAATGTA CCGGGTGGGG CAAACCACCA AACACCCTGG 11805 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGGTGATTG TGGTGGGGTC TTGCAATGTA CCGGGTGGGG CAAACCACCA AACACCCTGG 300 CCGAGTACGC CTTGGACCAG TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG 11745 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGAGTACGC CTTGGACCAG TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG 360 GATTTAATAT TCCAATGACT TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA 11685 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATTTAATAT TCCAATGACT TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA 420 TTCATTGTAC GGCTAATATA AATGGTGAAT GTCCTGGTTC ACTTAGGGTA CCCGGAGGAT 11625 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCATTGTAC GGCTAATATA AATGGTGAAT GTCCTGGTTC ACTTAGGGTA CCCGGAGGAT 480 GTAACAATCC TTGTACCACG TTCGGAGGAC AACAATATTG TTGCACACAA GGTCCATGTG 11565 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTAACAATCC TTGTACCACG TTCGGAGGAC AACAATATTG TTGCACACAA GGTCCATGTG 540 GCCCTACTGA TTTGTCGAGA TTTTTCAAAC AAAGATGTCC TGATGCGTAT AGCTACCCAC 11505 |||||||||| ||||||| || || | ||||| | |||||||| |||||||||| |||||||||| GCCCTACTGA TTTGTCGGGA TTGTGCAAAC AGAGATGTCC TGATGCGTAT AGCTACCCAC 600 AAGATGATCC TACTAGCACA TTTACTTGCC CT 11473 | |||||||| |||||||||| |||||||||| || AGGATGATCC TACTAGCACA TTTACTTGCC CT 632 hqPGS_C08HBa0235H18.1-_SGN-E302616+ (12104 11473) ******************************************************************************** EST sequence 797 +strand 632 n (File: SGN-E251623+) 1 TGACATCTTC TTTTGGTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 61 TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 121 GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 181 CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 241 CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 301 CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG 361 GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 421 TTCATTGCAC GGCCAATATA AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT 481 GTAACAACCC TTGTACCACG TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG 541 GCCCTACAGA GTTGTCCAAA TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC 601 AAGACGATCC TACAAGCACA TTTACTTGCC CT Predicted gene structure (within gDNA segment 13694 to 10863): Exon 1 12104 11473 ( 632 n); cDNA 1 632 ( 632 n); score: 0.900 MATCH C08HBa0235H18.1- SGN-E251623+ 0.900 632 1.000 C PGS_C08HBa0235H18.1-_SGN-E251623+ (12104 11473) Alignment (genomic DNA sequence = upper lines): TGAGATCTTC TTTTGTTTTC TTCCTTCTTG CTTTTGTGAC TTACACTTAT GCTGCCACTT 12045 ||| |||||| ||||| | || ||| | ||| || |||||| ||| |||||| ||||||||| TGACATCTTC TTTTGGTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 60 TCGAGGTACG CAACAACTGT CCATACACCG TCTGGGCGGC GTCGACCCCA ATAGGCGGTG 11985 | |||||||| |||||||||| |||||||||| | |||||||| ||||| || |||||||||| TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 120 GTCGACGTCT TGATCGAGGC CAAACATGGG TCATCAATGC ACCGAGGGGC ACTAAGATGG 11925 |||||||||| |||||||| |||||||||| |||||||||| |||||||| |||||||||| GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 180 CACGTATATG GGGTCGTACG AATTGCAACT TTGATGGTGC TGGTAGAGGT TCATGTCAGA 11865 |||||||||| ||||||||| |||||||| || ||| ||| || |||||| ||||||||| CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 240 CTGGTGATTG TGGTGGGGTC TTGCAATGTA CCGGGTGGGG CAAACCACCA AACACCCTGG 11805 |||||||||| |||||| ||| || || |||| |||| ||||| |||||| ||| |||||||| | CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 300 CCGAGTACGC CTTGGACCAG TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG 11745 |||||||||| |||||||||| ||||||||| ||||||| || |||||||||| |||||||||| CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG 360 GATTTAATAT TCCAATGACT TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA 11685 |||||||||| |||||||||| || ||||| | | || ||||| |||||| ||| || || |||| GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 420 TTCATTGTAC GGCTAATATA AATGGTGAAT GTCCTGGTTC ACTTAGGGTA CCCGGAGGAT 11625 ||||||| || ||| |||||| |||||||||| ||||| | | |||| |||| || ||||||| TTCATTGCAC GGCCAATATA AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT 480 GTAACAATCC TTGTACCACG TTCGGAGGAC AACAATATTG TTGCACACAA GGTCCATGTG 11565 ||||||| || |||||||||| || ||||||| |||||||||| |||||| ||| |||||||||| GTAACAACCC TTGTACCACG TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG 540 GCCCTACTGA TTTGTCGAGA TTTTTCAAAC AAAGATGTCC TGATGCGTAT AGCTACCCAC 11505 ||||||| || ||||| | | |||||||| |||||||||| ||||| ||| |||||||||| GCCCTACAGA GTTGTCCAAA TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC 600 AAGATGATCC TACTAGCACA TTTACTTGCC CT 11473 |||| ||||| ||| |||||| |||||||||| || AAGACGATCC TACAAGCACA TTTACTTGCC CT 632 hqPGS_C08HBa0235H18.1-_SGN-E251623+ (12104 11473) ******************************************************************************** EST sequence 972 +strand 611 n (File: SGN-E256710+) 1 TCTTCCTTCT TTGTGTGACT TATACTTATG CTGCCACTAT TGAGGTACGC AACAACTGTC 61 CATACACCGT TTGGGCGGCA TCGACTCCGA TAGGCGGTGG TCGACGTCTC AATCGAGGCC 121 AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC ACGTATATGG GGTCGTACTG 181 GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC TGGTGATTGT GGTGGAGTCT 241 TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC CGAGTACGCC TTGGACCAGT 301 TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG ATTTAATATT CCAATGACTT 361 TTGCCCCAAC AAAACCTAGT GGAGGAAAAT GTCACGCAAT TCATTGCACG GCCAATATAA 421 ATGGTGAATG TCCTCGCGCC CTTAAGGTAC CTGGAGGATG TAACAACCCT TGTACCACGT 481 TTGGAGGACA ACAATATTGT TGCACCCAAG GTCCATGTGG CCCTACAGAG TTGTCCAAAT 541 TTTTCAAGAA AAGATGTCCC GATGCTTATA GCTACCCACA AGACGATCCT ACAAGCACAT 601 TTACTTGCCC T Predicted gene structure (within gDNA segment 13484 to 10863): Exon 1 12083 11473 ( 611 n); cDNA 1 611 ( 611 n); score: 0.902 MATCH C08HBa0235H18.1- SGN-E256710+ 0.902 611 1.000 C PGS_C08HBa0235H18.1-_SGN-E256710+ (12083 11473) Alignment (genomic DNA sequence = upper lines): TCCTTCTTGC TTTTGTGACT TACACTTATG CTGCCACTTT CGAGGTACGC AACAACTGTC 12024 || | ||| || ||||||| || ||||||| |||||||| | ||||||||| |||||||||| TCTTCCTTCT TTGTGTGACT TATACTTATG CTGCCACTAT TGAGGTACGC AACAACTGTC 60 CATACACCGT CTGGGCGGCG TCGACCCCAA TAGGCGGTGG TCGACGTCTT GATCGAGGCC 11964 |||||||||| |||||||| ||||| || | |||||||||| ||||||||| ||||||||| CATACACCGT TTGGGCGGCA TCGACTCCGA TAGGCGGTGG TCGACGTCTC AATCGAGGCC 120 AAACATGGGT CATCAATGCA CCGAGGGGCA CTAAGATGGC ACGTATATGG GGTCGTACGA 11904 |||||||||| ||||||||| |||||||| | |||||||||| |||||||||| |||||||| AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC ACGTATATGG GGTCGTACTG 180 ATTGCAACTT TGATGGTGCT GGTAGAGGTT CATGTCAGAC TGGTGATTGT GGTGGGGTCT 11844 ||||||||| | ||| ||| || |||||| |||||||||| |||||||||| ||||| |||| GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC TGGTGATTGT GGTGGAGTCT 240 TGCAATGTAC CGGGTGGGGC AAACCACCAA ACACCCTGGC CGAGTACGCC TTGGACCAGT 11784 | || ||||| ||| |||||| ||||| |||| ||||||| || |||||||||| |||||||||| TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC CGAGTACGCC TTGGACCAGT 300 TTAGCAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG ATTTAATATT CCAATGACTT 11724 |||||||| | |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG ATTTAATATT CCAATGACTT 360 TCGCCCCGAC CAATCCTAGT GGAGGGAAAT GCCATGCAAT TCATTGTACG GCTAATATAA 11664 | ||||| || || |||||| ||||| |||| | || ||||| |||||| ||| || ||||||| TTGCCCCAAC AAAACCTAGT GGAGGAAAAT GTCACGCAAT TCATTGCACG GCCAATATAA 420 ATGGTGAATG TCCTGGTTCA CTTAGGGTAC CCGGAGGATG TAACAATCCT TGTACCACGT 11604 |||||||||| |||| | | |||| ||||| | |||||||| |||||| ||| |||||||||| ATGGTGAATG TCCTCGCGCC CTTAAGGTAC CTGGAGGATG TAACAACCCT TGTACCACGT 480 TCGGAGGACA ACAATATTGT TGCACACAAG GTCCATGTGG CCCTACTGAT TTGTCGAGAT 11544 | |||||||| |||||||||| ||||| |||| |||||||||| |||||| || ||||| | || TTGGAGGACA ACAATATTGT TGCACCCAAG GTCCATGTGG CCCTACAGAG TTGTCCAAAT 540 TTTTCAAACA AAGATGTCCT GATGCGTATA GCTACCCACA AGATGATCCT ACTAGCACAT 11484 ||||||| | ||||||||| ||||| |||| |||||||||| ||| |||||| || ||||||| TTTTCAAGAA AAGATGTCCC GATGCTTATA GCTACCCACA AGACGATCCT ACAAGCACAT 600 TTACTTGCCC T 11473 |||||||||| | TTACTTGCCC T 611 hqPGS_C08HBa0235H18.1-_SGN-E256710+ (12083 11473) ******************************************************************************** EST sequence 748 +strand 659 n (File: SGN-E214263+) 1 AAAATAGTTC CACAAACATG GCCTACTTGA GATCTTCTTT TGTTTTCTTC CTTCTTGCTT 61 TTGTGACTTA CACTTATGCT GCCACTTTCG AGGTACGCAA CAACTGTCCA TACACCGTCT 121 GGGCGGCGTC GACCCCAATA GGCGGTGGTC GACGTCTTGA TCGAGGCCAA ACATGGGTCA 181 TCAATGCACC GAGGGGCACT AAGATGGCAC GTATATGGGG TCGTACGAAT TGCAACTTTG 241 ATGGTGCTGG TAGAGGTTCA TGTCAGACTG GTGATTGTGG TGGGGTCTTG CAATGTACCG 301 GGTGGGGCAA ACCACCAAAC ACCCTGGCCG AGTACGCCTT GGACCAGTTT AGCAACCTAG 361 ATTTCTGGGA CATTTCTTTA GTCGATGGAT TTAATATTCC AATGACTTTC GCCCCGACCA 421 ATCCTAGTGG AGGGAAATGC CATGCAATTC ATTGTACGGC TAATATAAAT GGTGAATGTC 481 CTGGTTCACT TANGGTACCC GGAGGATGTA ACAATCCTTG TACCACGTTC GGAGGACAAC 541 AATATTGTTG CACACAAGGT CCATGTGGCC CTACTGATTT GTCGAGATTT TCAAACAAAG 601 ATGTCCTGAT GCGTATAGCT ACCCACAAGA TGATCCTACT AGCACATTTA CTTGCCCCT Predicted gene structure (within gDNA segment 12731 to 10844): Exon 1 12131 11474 ( 658 n); cDNA 1 657 ( 657 n); score: 0.997 MATCH C08HBa0235H18.1- SGN-E214263+ 0.997 658 0.998 C PGS_C08HBa0235H18.1-_SGN-E214263+ (12131 11474) Alignment (genomic DNA sequence = upper lines): AAAATAGTTC CACAAACATG GCCTACTTGA GATCTTCTTT TGTTTTCTTC CTTCTTGCTT 12072 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAATAGTTC CACAAACATG GCCTACTTGA GATCTTCTTT TGTTTTCTTC CTTCTTGCTT 60 TTGTGACTTA CACTTATGCT GCCACTTTCG AGGTACGCAA CAACTGTCCA TACACCGTCT 12012 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTGACTTA CACTTATGCT GCCACTTTCG AGGTACGCAA CAACTGTCCA TACACCGTCT 120 GGGCGGCGTC GACCCCAATA GGCGGTGGTC GACGTCTTGA TCGAGGCCAA ACATGGGTCA 11952 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGCGGCGTC GACCCCAATA GGCGGTGGTC GACGTCTTGA TCGAGGCCAA ACATGGGTCA 180 TCAATGCACC GAGGGGCACT AAGATGGCAC GTATATGGGG TCGTACGAAT TGCAACTTTG 11892 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAATGCACC GAGGGGCACT AAGATGGCAC GTATATGGGG TCGTACGAAT TGCAACTTTG 240 ATGGTGCTGG TAGAGGTTCA TGTCAGACTG GTGATTGTGG TGGGGTCTTG CAATGTACCG 11832 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGTGCTGG TAGAGGTTCA TGTCAGACTG GTGATTGTGG TGGGGTCTTG CAATGTACCG 300 GGTGGGGCAA ACCACCAAAC ACCCTGGCCG AGTACGCCTT GGACCAGTTT AGCAACCTAG 11772 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGGGGCAA ACCACCAAAC ACCCTGGCCG AGTACGCCTT GGACCAGTTT AGCAACCTAG 360 ATTTCTGGGA CATTTCTTTA GTCGATGGAT TTAATATTCC AATGACTTTC GCCCCGACCA 11712 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTCTGGGA CATTTCTTTA GTCGATGGAT TTAATATTCC AATGACTTTC GCCCCGACCA 420 ATCCTAGTGG AGGGAAATGC CATGCAATTC ATTGTACGGC TAATATAAAT GGTGAATGTC 11652 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCCTAGTGG AGGGAAATGC CATGCAATTC ATTGTACGGC TAATATAAAT GGTGAATGTC 480 CTGGTTCACT TAGGGTACCC GGAGGATGTA ACAATCCTTG TACCACGTTC GGAGGACAAC 11592 |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGGTTCACT TANGGTACCC GGAGGATGTA ACAATCCTTG TACCACGTTC GGAGGACAAC 540 AATATTGTTG CACACAAGGT CCATGTGGCC CTACTGATTT GTCGAGATTT TTCAAACAAA 11532 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| AATATTGTTG CACACAAGGT CCATGTGGCC CTACTGATTT GTCGAGA-TT TTCAAACAAA 599 GATGTCCTGA TGCGTATAGC TACCCACAAG ATGATCCTAC TAGCACATTT ACTTGCCC 11474 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| GATGTCCTGA TGCGTATAGC TACCCACAAG ATGATCCTAC TAGCACATTT ACTTGCCC 657 hqPGS_C08HBa0235H18.1-_SGN-E214263+ (12131 11474) ******************************************************************************** EST sequence 453 +strand 645 n (File: SGN-E211803+) 1 AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 61 TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 121 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 181 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 241 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 301 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 361 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 421 AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 481 GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC 541 CCAAGGTCCA TGTGGCCCTA CAGAGTTGTC CAAATTTTTC AAGAAAAGAT GTCCCGATGC 601 TTATAGCTAC CCACNAGACG ATCCTACNAG CACATTTACT TGCCC Predicted gene structure (within gDNA segment 13834 to 10108): Exon 1 12118 11474 ( 645 n); cDNA 1 645 ( 645 n); score: 0.901 MATCH C08HBa0235H18.1- SGN-E211803+ 0.901 645 1.000 C PGS_C08HBa0235H18.1-_SGN-E211803+ (12118 11474) Alignment (genomic DNA sequence = upper lines): AAACATGGCC TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG TGACTTACAC 12059 |||||||| | ||||||| || |||||||||| | ||||| | ||| || || ||||||| || AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 60 TTATGCTGCC ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG CGGCGTCGAC 11999 |||||||||| ||| | |||| |||||||||| |||||||||| ||||| |||| |||| ||||| TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 120 CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG 11939 || |||||| |||||||||| |||| |||| |||||||||| |||||||||| |||| ||||| TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 180 GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG 11879 ||| |||||| |||||||||| |||||||||| ||| |||| |||||| ||| ||| || || GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 240 AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC 11819 |||| ||||| |||||||||| |||||||||| ||||| || |||||||| | |||||||||| AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 300 ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT 11759 ||||||||| || ||||||| |||||||||| |||||||||| ||| |||||| | |||||||| CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 360 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG 11699 |||||||||| |||||||||| |||||||||| |||||| ||| || || || | |||||||||| TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 420 GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG 11639 ||||| || |||||||||| | ||||| || |||||||||| ||||||||| | | |||| AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 480 GGTACCCGGA GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT ATTGTTGCAC 11579 |||||| ||| |||||||||| | |||||||| |||||| ||| |||||||||| |||||||||| GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC 540 ACAAGGTCCA TGTGGCCCTA CTGATTTGTC GAGATTTTTC AAACAAAGAT GTCCTGATGC 11519 ||||||||| |||||||||| | || ||||| | ||||||| || |||||| |||| ||||| CCAAGGTCCA TGTGGCCCTA CAGAGTTGTC CAAATTTTTC AAGAAAAGAT GTCCCGATGC 600 GTATAGCTAC CCACAAGATG ATCCTACTAG CACATTTACT TGCCC 11474 ||||||||| |||| ||| | ||||||| || |||||||||| ||||| TTATAGCTAC CCACNAGACG ATCCTACNAG CACATTTACT TGCCC 645 hqPGS_C08HBa0235H18.1-_SGN-E211803+ (12118 11474) ******************************************************************************** EST sequence 523 +strand 636 n (File: SGN-E211072+) 1 CTACTTGACA TCTTCTTTTG TTCTCTTCTT CCTTCTTTGT GTGACTTATA CTTATGCTGC 61 CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA CTCCGATAGG 121 CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA GGGGAACTAA 181 GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA GAGGTACATG 241 TCAGACTGGT GATTGTGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC CCCCAAACAC 301 CCTAGCCGAG TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA TTTCTTTAGT 361 CGATGGATTT AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG GAAAATGTCA 421 CGCAATTCAT TGCACGGCCA ATATAAATGG TGAATGTCCT CGCGCCCTTA AGGTACCTGG 481 AGGATGTAAC AACCCTTGTA CCACGTTTGG AGGACAACAA TATTGTTGCA CCCAAGGTCC 541 ATGTGGCCCT ACAGAGTTGT CCAAATTTTT CAAGAAAAGA TGTCCCGATG CTTATAGCTA 601 CCCACAAGAC GATCCTACAA GCACATTTAC TTGCCC Predicted gene structure (within gDNA segment 13744 to 10864): Exon 1 12109 11474 ( 636 n); cDNA 1 636 ( 636 n); score: 0.903 MATCH C08HBa0235H18.1- SGN-E211072+ 0.903 636 1.000 C PGS_C08HBa0235H18.1-_SGN-E211072+ (12109 11474) Alignment (genomic DNA sequence = upper lines): CTACTTGAGA TCTTCTTTTG TTTTCTTCCT TCTTGCTTTT GTGACTTACA CTTATGCTGC 12050 |||||||| | |||||||||| || ||||| | ||| || | |||||||| | |||||||||| CTACTTGACA TCTTCTTTTG TTCTCTTCTT CCTTCTTTGT GTGACTTATA CTTATGCTGC 60 CACTTTCGAG GTACGCAACA ACTGTCCATA CACCGTCTGG GCGGCGTCGA CCCCAATAGG 11990 |||| | ||| |||||||||| |||||||||| |||||| ||| ||||| |||| | || ||||| CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA CTCCGATAGG 120 CGGTGGTCGA CGTCTTGATC GAGGCCAAAC ATGGGTCATC AATGCACCGA GGGGCACTAA 11930 |||||||||| ||||| ||| |||||||||| |||||||||| ||||| |||| |||| ||||| CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA GGGGAACTAA 180 GATGGCACGT ATATGGGGTC GTACGAATTG CAACTTTGAT GGTGCTGGTA GAGGTTCATG 11870 |||||||||| |||||||||| |||| ||| ||||||| || | ||| || | ||||| |||| GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA GAGGTACATG 240 TCAGACTGGT GATTGTGGTG GGGTCTTGCA ATGTACCGGG TGGGGCAAAC CACCAAACAC 11810 |||||||||| |||||||||| | ||||| || |||||||| |||||||||| | |||||||| TCAGACTGGT GATTGTGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC CCCCAAACAC 300 CCTGGCCGAG TACGCCTTGG ACCAGTTTAG CAACCTAGAT TTCTGGGACA TTTCTTTAGT 11750 ||| |||||| |||||||||| |||||||||| |||| ||||| || ||||||| |||||||||| CCTAGCCGAG TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA TTTCTTTAGT 360 CGATGGATTT AATATTCCAA TGACTTTCGC CCCGACCAAT CCTAGTGGAG GGAAATGCCA 11690 |||||||||| |||||||||| ||||||| || ||| || || |||||||||| | ||||| || CGATGGATTT AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG GAAAATGTCA 420 TGCAATTCAT TGTACGGCTA ATATAAATGG TGAATGTCCT GGTTCACTTA GGGTACCCGG 11630 ||||||||| || ||||| | |||||||||| |||||||||| | | |||| |||||| || CGCAATTCAT TGCACGGCCA ATATAAATGG TGAATGTCCT CGCGCCCTTA AGGTACCTGG 480 AGGATGTAAC AATCCTTGTA CCACGTTCGG AGGACAACAA TATTGTTGCA CACAAGGTCC 11570 |||||||||| || ||||||| ||||||| || |||||||||| |||||||||| | |||||||| AGGATGTAAC AACCCTTGTA CCACGTTTGG AGGACAACAA TATTGTTGCA CCCAAGGTCC 540 ATGTGGCCCT ACTGATTTGT CGAGATTTTT CAAACAAAGA TGTCCTGATG CGTATAGCTA 11510 |||||||||| || || |||| | | |||||| ||| ||||| ||||| |||| | |||||||| ATGTGGCCCT ACAGAGTTGT CCAAATTTTT CAAGAAAAGA TGTCCCGATG CTTATAGCTA 600 CCCACAAGAT GATCCTACTA GCACATTTAC TTGCCC 11474 ||||||||| |||||||| | |||||||||| |||||| CCCACAAGAC GATCCTACAA GCACATTTAC TTGCCC 636 hqPGS_C08HBa0235H18.1-_SGN-E211072+ (12109 11474) ******************************************************************************** EST sequence 582 +strand 630 n (File: SGN-E213091+) 1 TGACATCTTC TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 61 TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 121 GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 181 CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 241 CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 301 CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG 361 GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 421 TTCATTGCAC GGCCAATATA AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT 481 GTAACAACCC TTGTACCACG TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG 541 GCCCTACAGA GTTGTCCAAA TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC 601 AGACGATCCT ACNAGCACAT TTACTTGCCC Predicted gene structure (within gDNA segment 13694 to 10118): Exon 1 12104 11474 ( 631 n); cDNA 1 630 ( 630 n); score: 0.900 MATCH C08HBa0235H18.1- SGN-E213091+ 0.900 631 1.002 C PGS_C08HBa0235H18.1-_SGN-E213091+ (12104 11474) Alignment (genomic DNA sequence = upper lines): TGAGATCTTC TTTTGTTTTC TTCCTTCTTG CTTTTGTGAC TTACACTTAT GCTGCCACTT 12045 ||| |||||| ||||||| || ||| | ||| || |||||| ||| |||||| ||||||||| TGACATCTTC TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 60 TCGAGGTACG CAACAACTGT CCATACACCG TCTGGGCGGC GTCGACCCCA ATAGGCGGTG 11985 | |||||||| |||||||||| |||||||||| | |||||||| ||||| || |||||||||| TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 120 GTCGACGTCT TGATCGAGGC CAAACATGGG TCATCAATGC ACCGAGGGGC ACTAAGATGG 11925 |||||||||| |||||||| |||||||||| |||||||||| |||||||| |||||||||| GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 180 CACGTATATG GGGTCGTACG AATTGCAACT TTGATGGTGC TGGTAGAGGT TCATGTCAGA 11865 |||||||||| ||||||||| |||||||| || ||| ||| || |||||| ||||||||| CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 240 CTGGTGATTG TGGTGGGGTC TTGCAATGTA CCGGGTGGGG CAAACCACCA AACACCCTGG 11805 |||||||||| |||||| ||| || || |||| |||| ||||| |||||| ||| |||||||| | CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 300 CCGAGTACGC CTTGGACCAG TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG 11745 |||||||||| |||||||||| ||||||||| ||||||| || |||||||||| |||||||||| CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG 360 GATTTAATAT TCCAATGACT TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA 11685 |||||||||| |||||||||| || ||||| | | || ||||| |||||| ||| || || |||| GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 420 TTCATTGTAC GGCTAATATA AATGGTGAAT GTCCTGGTTC ACTTAGGGTA CCCGGAGGAT 11625 ||||||| || ||| |||||| |||||||||| ||||| | | |||| |||| || ||||||| TTCATTGCAC GGCCAATATA AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT 480 GTAACAATCC TTGTACCACG TTCGGAGGAC AACAATATTG TTGCACACAA GGTCCATGTG 11565 ||||||| || |||||||||| || ||||||| |||||||||| |||||| ||| |||||||||| GTAACAACCC TTGTACCACG TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG 540 GCCCTACTGA TTTGTCGAGA TTTTTCAAAC AAAGATGTCC TGATGCGTAT AGCTACCCAC 11505 ||||||| || ||||| | | |||||||| |||||||||| ||||| ||| |||||||||| GCCCTACAGA GTTGTCCAAA TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC 600 AAGATGATCC TACTAGCACA TTTACTTGCC C 11474 ||| ||||| ||| |||||| |||||||||| | -AGACGATCC TACNAGCACA TTTACTTGCC C 630 hqPGS_C08HBa0235H18.1-_SGN-E213091+ (12104 11474) ******************************************************************************** EST sequence 464 +strand 617 n (File: SGN-E211417+) 1 GTTCTCTTCT TCCTTCTTTG TGTGACTTAT ACTTATGCTG CCACTATTGA TTTACGCAAC 61 AACTGTCCAT ACACCGTTTG GGCGGCATCG ACTCCGATAG GCGGTGGTCG ACGTCTCAAT 121 CGAGGCCAAA CATGGGTCAT CAATGCTCCG AGGGGAACTA AGATGGCACG TATATGGGGT 181 CGTACTGGTT GCAACTTTAA TGCTGCAGGC AGAGGTACAT GTCAGACTGG TGATTGTGGT 241 GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAACA CCCTAGCCGA GTACGCCTTG 301 GACCAGTTTA GCAACTTAGA TTTTTGGGAC ATTTCTTTAG TCGATGGATT TAATATTCCA 361 ATGACTTTTG CCCCAACAAA ACCTAGTGGA GGAAAATGTC ACGCAATTCA TTGCACGGCC 421 AATATAAATG GTGAATGTCC TCGCGCCCTT AAGGTACCTG GAGGATGTAA CAACCCTTGT 481 ACCACGTTTG GAGGACAACA ATATTGTTGC ACCCAAGGAT CATGTGGCCC TACAGAGTTG 541 TCCAAATTTT TCAAGAATAG ATGTCCCGAT GCTTATAGCT ACCCACAAGA CGATCCCTAC 601 AGCACATTTA CTTGCCC Predicted gene structure (within gDNA segment 13554 to 10864): Exon 1 12090 11474 ( 617 n); cDNA 1 617 ( 617 n); score: 0.888 MATCH C08HBa0235H18.1- SGN-E211417+ 0.888 617 1.000 C PGS_C08HBa0235H18.1-_SGN-E211417+ (12090 11474) Alignment (genomic DNA sequence = upper lines): GTTTTCTTCC TTCTTGCTTT TGTGACTTAC ACTTATGCTG CCACTTTCGA GGTACGCAAC 12031 ||| ||||| | ||| || ||||||||| |||||||||| ||||| | || |||||||| GTTCTCTTCT TCCTTCTTTG TGTGACTTAT ACTTATGCTG CCACTATTGA TTTACGCAAC 60 AACTGTCCAT ACACCGTCTG GGCGGCGTCG ACCCCAATAG GCGGTGGTCG ACGTCTTGAT 11971 |||||||||| ||||||| || |||||| ||| || || |||| |||||||||| |||||| || AACTGTCCAT ACACCGTTTG GGCGGCATCG ACTCCGATAG GCGGTGGTCG ACGTCTCAAT 120 CGAGGCCAAA CATGGGTCAT CAATGCACCG AGGGGCACTA AGATGGCACG TATATGGGGT 11911 |||||||||| |||||||||| |||||| ||| ||||| |||| |||||||||| |||||||||| CGAGGCCAAA CATGGGTCAT CAATGCTCCG AGGGGAACTA AGATGGCACG TATATGGGGT 180 CGTACGAATT GCAACTTTGA TGGTGCTGGT AGAGGTTCAT GTCAGACTGG TGATTGTGGT 11851 ||||| || |||||||| | || ||| || |||||| ||| |||||||||| |||||||||| CGTACTGGTT GCAACTTTAA TGCTGCAGGC AGAGGTACAT GTCAGACTGG TGATTGTGGT 240 GGGGTCTTGC AATGTACCGG GTGGGGCAAA CCACCAAACA CCCTGGCCGA GTACGCCTTG 11791 || ||||| | | |||||||| ||||||||| || ||||||| |||| ||||| |||||||||| GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAACA CCCTAGCCGA GTACGCCTTG 300 GACCAGTTTA GCAACCTAGA TTTCTGGGAC ATTTCTTTAG TCGATGGATT TAATATTCCA 11731 |||||||||| ||||| |||| ||| |||||| |||||||||| |||||||||| |||||||||| GACCAGTTTA GCAACTTAGA TTTTTGGGAC ATTTCTTTAG TCGATGGATT TAATATTCCA 360 ATGACTTTCG CCCCGACCAA TCCTAGTGGA GGGAAATGCC ATGCAATTCA TTGTACGGCT 11671 |||||||| | |||| || || ||||||||| || ||||| | | |||||||| ||| ||||| ATGACTTTTG CCCCAACAAA ACCTAGTGGA GGAAAATGTC ACGCAATTCA TTGCACGGCC 420 AATATAAATG GTGAATGTCC TGGTTCACTT AGGGTACCCG GAGGATGTAA CAATCCTTGT 11611 |||||||||| |||||||||| | | | ||| | |||||| | |||||||||| ||| |||||| AATATAAATG GTGAATGTCC TCGCGCCCTT AAGGTACCTG GAGGATGTAA CAACCCTTGT 480 ACCACGTTCG GAGGACAACA ATATTGTTGC ACACAAGGTC CATGTGGCCC TACTGATTTG 11551 |||||||| | |||||||||| |||||||||| || ||||| |||||||||| ||| || ||| ACCACGTTTG GAGGACAACA ATATTGTTGC ACCCAAGGAT CATGTGGCCC TACAGAGTTG 540 TCGAGATTTT TCAAACAAAG ATGTCCTGAT GCGTATAGCT ACCCACAAGA TGATCCTACT 11491 || | ||||| |||| | || |||||| ||| || ||||||| |||||||||| ||||| TCCAAATTTT TCAAGAATAG ATGTCCCGAT GCTTATAGCT ACCCACAAGA CGATCCCTAC 600 AGCACATTTA CTTGCCC 11474 |||||||||| ||||||| AGCACATTTA CTTGCCC 617 hqPGS_C08HBa0235H18.1-_SGN-E211417+ (12090 11474) ******************************************************************************** EST sequence 577 +strand 464 n (File: SGN-E201711+) 1 GGAACTAAGA TGGCACGTAT ATGGGGTCGT ACTGGTTGCA ACTTTAATGC TGCAGGCAGA 61 GGTACATGTC AGACTGGTGA TTGTGGTGGA GTCTTACAGT GTACCGGATG GGGCAAACCC 121 CCAAACACCC TAGCCGAGTA CGCCTTGGAC CAGTTTAGCA ACTTAGATTT TTGGGACATT 181 TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTTGCCC CAACAAAACC TAGTGGAGGA 241 AAATGTCACG CAATTCATTG CACGGCCAAT ATAAATGGTG AATGTCCTCG CGCCCTTAAG 301 GTACCTGGAG GATGTAACAA CCCTTGTACC ACGTTTGGAG GACAACAATA TTGTTGCACC 361 CAAGGTCCAT GTGGCCCTAC AGAGTTGTCC AAATTTTTCA AGAAAAGATG TCCCGATGCT 421 TATAGCTACC CACAAGACGA TCCTACAAGC ACATTTACTT GCCC Predicted gene structure (within gDNA segment 13725 to 10864): Exon 1 11937 11474 ( 464 n); cDNA 1 464 ( 464 n); score: 0.903 MATCH C08HBa0235H18.1- SGN-E201711+ 0.903 464 1.000 C PGS_C08HBa0235H18.1-_SGN-E201711+ (11937 11474) Alignment (genomic DNA sequence = upper lines): GGCACTAAGA TGGCACGTAT ATGGGGTCGT ACGAATTGCA ACTTTGATGG TGCTGGTAGA 11878 || ||||||| |||||||||| |||||||||| || ||||| ||||| ||| ||| || ||| GGAACTAAGA TGGCACGTAT ATGGGGTCGT ACTGGTTGCA ACTTTAATGC TGCAGGCAGA 60 GGTTCATGTC AGACTGGTGA TTGTGGTGGG GTCTTGCAAT GTACCGGGTG GGGCAAACCA 11818 ||| |||||| |||||||||| ||||||||| ||||| || | ||||||| || ||||||||| GGTACATGTC AGACTGGTGA TTGTGGTGGA GTCTTACAGT GTACCGGATG GGGCAAACCC 120 CCAAACACCC TGGCCGAGTA CGCCTTGGAC CAGTTTAGCA ACCTAGATTT CTGGGACATT 11758 |||||||||| | |||||||| |||||||||| |||||||||| || ||||||| ||||||||| CCAAACACCC TAGCCGAGTA CGCCTTGGAC CAGTTTAGCA ACTTAGATTT TTGGGACATT 180 TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTCGCCC CGACCAATCC TAGTGGAGGG 11698 |||||||||| |||||||||| |||||||||| ||||| |||| | || || || ||||||||| TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTTGCCC CAACAAAACC TAGTGGAGGA 240 AAATGCCATG CAATTCATTG TACGGCTAAT ATAAATGGTG AATGTCCTGG TTCACTTAGG 11638 ||||| || | |||||||||| ||||| ||| |||||||||| |||||||| | | |||| | AAATGTCACG CAATTCATTG CACGGCCAAT ATAAATGGTG AATGTCCTCG CGCCCTTAAG 300 GTACCCGGAG GATGTAACAA TCCTTGTACC ACGTTCGGAG GACAACAATA TTGTTGCACA 11578 ||||| |||| |||||||||| ||||||||| ||||| |||| |||||||||| ||||||||| GTACCTGGAG GATGTAACAA CCCTTGTACC ACGTTTGGAG GACAACAATA TTGTTGCACC 360 CAAGGTCCAT GTGGCCCTAC TGATTTGTCG AGATTTTTCA AACAAAGATG TCCTGATGCG 11518 |||||||||| |||||||||| || ||||| | |||||||| | ||||||| ||| ||||| CAAGGTCCAT GTGGCCCTAC AGAGTTGTCC AAATTTTTCA AGAAAAGATG TCCCGATGCT 420 TATAGCTACC CACAAGATGA TCCTACTAGC ACATTTACTT GCCC 11474 |||||||||| ||||||| || |||||| ||| |||||||||| |||| TATAGCTACC CACAAGACGA TCCTACAAGC ACATTTACTT GCCC 464 hqPGS_C08HBa0235H18.1-_SGN-E201711+ (11937 11474) ******************************************************************************** EST sequence 615 +strand 639 n (File: SGN-E335205+) 1 TGGCCTACTT GAGATCTTCT TTTGTTTTCT TCCTTCTTGC TTTTGTGACT TACACTTATG 61 CTGCCACTTT CGAGGTACGC AACAACTGTC CATACACCGT CTGGGCGGCG TCGACCCCAA 121 TAGGCGGTGG TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA CCGAGGGGCA 181 CTAAGATGGC ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT GGTAGAGGTT 241 CATGTCAGAC TGGTGATTGT GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA 301 ACACCCTGGC CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT 361 TAGTCGATGG ATTTAATATT CCAATGACTT TCGCCCCGAC CAATCCTAGT GGAGGGAAAT 421 GCCATGCAAT TCATTGTACG GCTAATATAA ATGGTGAATG TCCTGGTTCA CTTAGGGTAC 481 CCGGAGGATG TAACAATCCT TGTACCACGT TCGGAGGACA ACAATATTGT TGCACACAAG 541 GTCCATGTGG CCCTACTGAT TTGTCGAGAT TTTTCAAACA AAGATGTCCT GATGCGTATA 601 GCTACCCACA AGATGATCCT ACTAACACAT TTACTTGCC Predicted gene structure (within gDNA segment 12713 to 10730): Exon 1 12113 11475 ( 639 n); cDNA 1 639 ( 639 n); score: 0.998 MATCH C08HBa0235H18.1- SGN-E335205+ 0.998 639 1.000 C PGS_C08HBa0235H18.1-_SGN-E335205+ (12113 11475) Alignment (genomic DNA sequence = upper lines): TGGCCTACTT GAGATCTTCT TTTGTTTTCT TCCTTCTTGC TTTTGTGACT TACACTTATG 12054 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGCCTACTT GAGATCTTCT TTTGTTTTCT TCCTTCTTGC TTTTGTGACT TACACTTATG 60 CTGCCACTTT CGAGGTACGC AACAACTGTC CATACACCGT CTGGGCGGCG TCGACCCCAA 11994 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGCCACTTT CGAGGTACGC AACAACTGTC CATACACCGT CTGGGCGGCG TCGACCCCAA 120 TAGGCGGTGG TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA CCGAGGGGCA 11934 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGGCGGTGG TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA CCGAGGGGCA 180 CTAAGATGGC ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT GGTAGAGGTT 11874 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAAGATGGC ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT GGTAGAGGTT 240 CATGTCAGAC TGGTGATTGT GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA 11814 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGTCAGAC TGGTGATTGT GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA 300 ACACCCTGGC CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT 11754 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACACCCTGGC CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT 360 TAGTCGATGG ATTTAATATT CCAATGACTT TCGCCCCGAC CAATCCTAGT GGAGGGAAAT 11694 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGTCGATGG ATTTAATATT CCAATGACTT TCGCCCCGAC CAATCCTAGT GGAGGGAAAT 420 GCCATGCAAT TCATTGTACG GCTAATATAA ATGGTGAATG TCCTGGTTCA CTTAGGGTAC 11634 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCATGCAAT TCATTGTACG GCTAATATAA ATGGTGAATG TCCTGGTTCA CTTAGGGTAC 480 CCGGAGGATG TAACAATCCT TGTACCACGT TCGGAGGACA ACAATATTGT TGCACACAAG 11574 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGGAGGATG TAACAATCCT TGTACCACGT TCGGAGGACA ACAATATTGT TGCACACAAG 540 GTCCATGTGG CCCTACTGAT TTGTCGAGAT TTTTCAAACA AAGATGTCCT GATGCGTATA 11514 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCCATGTGG CCCTACTGAT TTGTCGAGAT TTTTCAAACA AAGATGTCCT GATGCGTATA 600 GCTACCCACA AGATGATCCT ACTAGCACAT TTACTTGCC 11475 |||||||||| |||||||||| |||| ||||| ||||||||| GCTACCCACA AGATGATCCT ACTAACACAT TTACTTGCC 639 hqPGS_C08HBa0235H18.1-_SGN-E335205+ (12113 11475) ******************************************************************************** EST sequence 563 +strand 655 n (File: SGN-E305774+) 1 TTTTATTCTA TAATGAGTCA TTTGACAACT TGTTTAGTGT TGTTTCTCCT TGCCTTTGTG 61 ACTTACACTT ATGCTTCCGG TGTATTTGAG GTCCATAACA ACTGTCCATA CACCGTATGG 121 GCAGCGGCGA CTCCCGTAGG AGGTGGCCGA CGTCTCGAGA GAGGTCAAAG TTGGTGGTTT 181 TGGGCTCCAC CGGGCACCAA AATGGCACGT ATTTGGGGTC GTACTAATTG CAATTTTGAT 241 GGTGCTGGTA GAGGTTGGTG CCAGACCGGT GATTGTGGTG GAGTCTTGGA ATGCAAAGGA 301 TGGGGTAAAC CACCAAACAC CTTAGCTGAA TACGCTTTGA ATCAATTTAG CAACTTAGAT 361 TTCTGGGACA TTTCTGTTAT TGATGGATTC AACATCCCTA TGTCTTTCGG CCCAACTAAC 421 CCTGGGCCGG GAAAATGTCA TCCAATTCAA TGTGTTGCTA ATATAAACGG TGAATGCCCT 481 GGTTCACTTA GGGTACCCGG AGGATGTAAC AACCCTTGTA CTACATTCGG AGGACAACAA 541 TATTGTTGCA CTCAAGGTCC ATGTGGTCCT ACCGATTTGT CAAGATTTTT CAAACAAAGA 601 TGTCCCGATG CCTATAGTTA TCCTCAAGAC GATCCAACAA GTACTTTTAC TTGTC Predicted gene structure (within gDNA segment 17022 to 9929): Exon 1 12124 11477 ( 648 n); cDNA 3 653 ( 651 n); score: 0.800 MATCH C08HBa0235H18.1- SGN-E305774+ 0.800 648 0.989 C PGS_C08HBa0235H18.1-_SGN-E305774+ (12124 11477) Alignment (genomic DNA sequence = upper lines): TTCCACAAAC ATGGCCTACT TGAGATCTTC TTTTGTTTTC TTCCTTCTTG CTTTTGTGAC 12065 || | | ||| | | ||| | ||| ||| || || || || |||| | |||||||| TTATTCTATA ATGAGTCATT TGACAACTTG TTTAGTGTTG TTTCTCCTTG CCTTTGTGAC 62 TTACACTTAT GCTGCC--AC T-TTCGAGGT ACGCAACAAC TGTCCATACA CCGTCTGGGC 12008 |||||||||| ||| || | || ||||| | |||||| |||||||||| |||| ||||| TTACACTTAT GCTTCCGGTG TATTTGAGGT CCATAACAAC TGTCCATACA CCGTATGGGC 122 GGCGTCGACC CCAATAGGCG GTGGTCGACG TCTTGATCGA GGCCAAACAT GGGTCATCAA 11948 ||| |||| || |||| | |||| ||||| ||| || || || |||| | || | AGCGGCGACT CCCGTAGGAG GTGGCCGACG TCTCGAGAGA GGTCAAAGTT GGTGGTTTTG 182 TGCACCGAGG GGCACTAAGA TGGCACGTAT ATGGGGTCGT ACGAATTGCA ACTTTGATGG 11888 || || | ||||| || | |||||||||| ||||||||| || ||||||| | |||||||| GGCTCCACCG GGCACCAAAA TGGCACGTAT TTGGGGTCGT ACTAATTGCA ATTTTGATGG 242 TGCTGGTAGA GGTTCATGTC AGACTGGTGA TTGTGGTGGG GTCTTGCAAT GTACCGGGTG 11828 |||||||||| |||| || | |||| ||||| ||||||||| |||||| ||| | | || || TGCTGGTAGA GGTTGGTGCC AGACCGGTGA TTGTGGTGGA GTCTTGGAAT GCAAAGGATG 302 GGGCAAACCA CCAAACACCC TGGCCGAGTA CGCCTTGGAC CAGTTTAGCA ACCTAGATTT 11768 ||| |||||| ||||||||| | || || || ||| ||| | || ||||||| || ||||||| GGGTAAACCA CCAAACACCT TAGCTGAATA CGCTTTGAAT CAATTTAGCA ACTTAGATTT 362 CTGGGACATT TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTCGCCC CGACCAATCC 11708 |||||||||| ||| | | | ||||||| || || || ||| |||||| || | || || || CTGGGACATT TCTGTTATTG ATGGATTCAA CATCCCTATG TCTTTCGGCC CAACTAACCC 422 TAGTGGAGGG AAATGCCATG CAATTCATTG TACGGCTAAT ATAAATGGTG AATGTCCTGG 11648 | | || ||||| ||| ||||||| || | |||||| ||||| |||| |||| ||||| TGGGCCGGGA AAATGTCATC CAATTCAATG TGTTGCTAAT ATAAACGGTG AATGCCCTGG 482 TTCACTTAGG GTACCCGGAG GATGTAACAA TCCTTGTACC ACGTTCGGAG GACAACAATA 11588 |||||||||| |||||||||| |||||||||| |||||||| || ||||||| |||||||||| TTCACTTAGG GTACCCGGAG GATGTAACAA CCCTTGTACT ACATTCGGAG GACAACAATA 542 TTGTTGCACA CAAGGTCCAT GTGGCCCTAC TGATTTGTCG AGATTTTTCA AACAAAGATG 11528 ||||||||| |||||||||| |||| ||||| |||||||| |||||||||| |||||||||| TTGTTGCACT CAAGGTCCAT GTGGTCCTAC CGATTTGTCA AGATTTTTCA AACAAAGATG 602 TCCTGATGCG TATAGCTACC CACAAGATGA TCCTACTAGC ACATTTACTT G 11477 ||| ||||| ||||| || | | ||||| || ||| || || || ||||||| | TCCCGATGCC TATAGTTATC CTCAAGACGA TCCAACAAGT ACTTTTACTT G 653 hqPGS_C08HBa0235H18.1-_SGN-E305774+ (12124 11477) ******************************************************************************** EST sequence 641 +strand 642 n (File: SGN-E212383+) 1 AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 61 TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 121 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 181 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 241 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 301 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 361 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 421 AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 481 GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC 541 CCAAGGTCCA TGTGGCCCTA CAGAGTTGTC CAAATTTTTC AAGAAAAGAT GTCCCGATGC 601 TTATAGCTAC CCACAAGACG ATCCCTACAG CACATTTACT TG Predicted gene structure (within gDNA segment 13834 to 10138): Exon 1 12118 11477 ( 642 n); cDNA 1 642 ( 642 n); score: 0.897 MATCH C08HBa0235H18.1- SGN-E212383+ 0.897 642 1.000 C PGS_C08HBa0235H18.1-_SGN-E212383+ (12118 11477) Alignment (genomic DNA sequence = upper lines): AAACATGGCC TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG TGACTTACAC 12059 |||||||| | ||||||| || |||||||||| | ||||| | ||| || || ||||||| || AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 60 TTATGCTGCC ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG CGGCGTCGAC 11999 |||||||||| ||| | |||| |||||||||| |||||||||| ||||| |||| |||| ||||| TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 120 CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG 11939 || |||||| |||||||||| |||| |||| |||||||||| |||||||||| |||| ||||| TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 180 GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG 11879 ||| |||||| |||||||||| |||||||||| ||| |||| |||||| ||| ||| || || GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 240 AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC 11819 |||| ||||| |||||||||| |||||||||| ||||| || |||||||| | |||||||||| AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 300 ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT 11759 ||||||||| || ||||||| |||||||||| |||||||||| ||| |||||| | |||||||| CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 360 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG 11699 |||||||||| |||||||||| |||||||||| |||||| ||| || || || | |||||||||| TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 420 GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG 11639 ||||| || |||||||||| | ||||| || |||||||||| ||||||||| | | |||| AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 480 GGTACCCGGA GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT ATTGTTGCAC 11579 |||||| ||| |||||||||| | |||||||| |||||| ||| |||||||||| |||||||||| GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC 540 ACAAGGTCCA TGTGGCCCTA CTGATTTGTC GAGATTTTTC AAACAAAGAT GTCCTGATGC 11519 ||||||||| |||||||||| | || ||||| | ||||||| || |||||| |||| ||||| CCAAGGTCCA TGTGGCCCTA CAGAGTTGTC CAAATTTTTC AAGAAAAGAT GTCCCGATGC 600 GTATAGCTAC CCACAAGATG ATCCTACTAG CACATTTACT TG 11477 ||||||||| |||||||| | |||| || |||||||||| || TTATAGCTAC CCACAAGACG ATCCCTACAG CACATTTACT TG 642 hqPGS_C08HBa0235H18.1-_SGN-E212383+ (12118 11477) ******************************************************************************** EST sequence 602 +strand 594 n (File: SGN-E303485+) 1 TGTGACTTAT ACTTATGCTG CCACTATTGA GGTACGCAAC AACTGTCCAT ACACCGTTTG 61 GGCGGGATCG ACTCCCATAG GCGGTGGTCG ACGTCTCAAT CGAGGCCAAA CATGGGTCAT 121 CAATGCTCCG AGGGGAACTA AAATGGCACG TATATGGGGT CGTACTGGTT GCAACTTTAA 181 TGCTGCAGGC AGAGGTACAT GTCAGACTGG TGATTGTGGT GGAGTCTTAC AGTGTACCGG 241 ATGGGGCAAA CCCCCAAACA CCCTATCCGA GTACGCCTTG GACCAGTTTA GCAACTTAGA 301 TTTTTGGGAC ATTTCTTTAG TCGATGGATT TAATATTCCA ATGACTTTTG CCCCAACAAA 361 ACCTAGTGGA GGAAAATGTC ACGCAATTCA TTGCACGGCC AATATAAATG GTGAATGTCC 421 TCGCGCCCTT AAGGTACCTG GAGGATGTAA CAACCCTTGT ACCACGTTTG GAGGACAACA 481 ATATTGTTGC ACCCAAGGTC CATGTGGCCC TACAGAGTTG TCCAAATTTT TCAAGAAAAG 541 ATGTCCCGAT GCTTATAGCT ACCCACAAGA CGATCCTACA AGCACATTTA CTTG Predicted gene structure (within gDNA segment 13354 to 10138): Exon 1 12070 11477 ( 594 n); cDNA 1 594 ( 594 n); score: 0.902 MATCH C08HBa0235H18.1- SGN-E303485+ 0.902 594 1.000 C PGS_C08HBa0235H18.1-_SGN-E303485+ (12070 11477) Alignment (genomic DNA sequence = upper lines): TGTGACTTAC ACTTATGCTG CCACTTTCGA GGTACGCAAC AACTGTCCAT ACACCGTCTG 12011 ||||||||| |||||||||| ||||| | || |||||||||| |||||||||| ||||||| || TGTGACTTAT ACTTATGCTG CCACTATTGA GGTACGCAAC AACTGTCCAT ACACCGTTTG 60 GGCGGCGTCG ACCCCAATAG GCGGTGGTCG ACGTCTTGAT CGAGGCCAAA CATGGGTCAT 11951 ||||| ||| || || |||| |||||||||| |||||| || |||||||||| |||||||||| GGCGGGATCG ACTCCCATAG GCGGTGGTCG ACGTCTCAAT CGAGGCCAAA CATGGGTCAT 120 CAATGCACCG AGGGGCACTA AGATGGCACG TATATGGGGT CGTACGAATT GCAACTTTGA 11891 |||||| ||| ||||| |||| | |||||||| |||||||||| ||||| || |||||||| | CAATGCTCCG AGGGGAACTA AAATGGCACG TATATGGGGT CGTACTGGTT GCAACTTTAA 180 TGGTGCTGGT AGAGGTTCAT GTCAGACTGG TGATTGTGGT GGGGTCTTGC AATGTACCGG 11831 || ||| || |||||| ||| |||||||||| |||||||||| || ||||| | | |||||||| TGCTGCAGGC AGAGGTACAT GTCAGACTGG TGATTGTGGT GGAGTCTTAC AGTGTACCGG 240 GTGGGGCAAA CCACCAAACA CCCTGGCCGA GTACGCCTTG GACCAGTTTA GCAACCTAGA 11771 ||||||||| || ||||||| |||| |||| |||||||||| |||||||||| ||||| |||| ATGGGGCAAA CCCCCAAACA CCCTATCCGA GTACGCCTTG GACCAGTTTA GCAACTTAGA 300 TTTCTGGGAC ATTTCTTTAG TCGATGGATT TAATATTCCA ATGACTTTCG CCCCGACCAA 11711 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||| | |||| || || TTTTTGGGAC ATTTCTTTAG TCGATGGATT TAATATTCCA ATGACTTTTG CCCCAACAAA 360 TCCTAGTGGA GGGAAATGCC ATGCAATTCA TTGTACGGCT AATATAAATG GTGAATGTCC 11651 ||||||||| || ||||| | | |||||||| ||| ||||| |||||||||| |||||||||| ACCTAGTGGA GGAAAATGTC ACGCAATTCA TTGCACGGCC AATATAAATG GTGAATGTCC 420 TGGTTCACTT AGGGTACCCG GAGGATGTAA CAATCCTTGT ACCACGTTCG GAGGACAACA 11591 | | | ||| | |||||| | |||||||||| ||| |||||| |||||||| | |||||||||| TCGCGCCCTT AAGGTACCTG GAGGATGTAA CAACCCTTGT ACCACGTTTG GAGGACAACA 480 ATATTGTTGC ACACAAGGTC CATGTGGCCC TACTGATTTG TCGAGATTTT TCAAACAAAG 11531 |||||||||| || ||||||| |||||||||| ||| || ||| || | ||||| |||| |||| ATATTGTTGC ACCCAAGGTC CATGTGGCCC TACAGAGTTG TCCAAATTTT TCAAGAAAAG 540 ATGTCCTGAT GCGTATAGCT ACCCACAAGA TGATCCTACT AGCACATTTA CTTG 11477 |||||| ||| || ||||||| |||||||||| |||||||| |||||||||| |||| ATGTCCCGAT GCTTATAGCT ACCCACAAGA CGATCCTACA AGCACATTTA CTTG 594 hqPGS_C08HBa0235H18.1-_SGN-E303485+ (12070 11477) ******************************************************************************** EST sequence 936 +strand 629 n (File: SGN-E276027+) 1 TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC TTATGCTGCC 61 ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC TCCGATAGGC 121 GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG 181 ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT 241 CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC 301 CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC 361 GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG AAAATGTCAC 421 GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA GGTACCTGGA 481 GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC CCAAGGTCCA 541 TGTGGCCCTA CAGAGTTGTC CAAATTTTTC AAGAAAAGAT GTCCCGATGC TTATAGCTAC 601 CCACAAGACG ATCCTACAAG CACATTTAC Predicted gene structure (within gDNA segment 13734 to 10168): Exon 1 12108 11480 ( 629 n); cDNA 1 629 ( 629 n); score: 0.901 MATCH C08HBa0235H18.1- SGN-E276027+ 0.901 629 1.000 C PGS_C08HBa0235H18.1-_SGN-E276027+ (12108 11480) Alignment (genomic DNA sequence = upper lines): TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG TGACTTACAC TTATGCTGCC 12049 ||||||| || |||||||||| | ||||| | ||| || || ||||||| || |||||||||| TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC TTATGCTGCC 60 ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG CGGCGTCGAC CCCAATAGGC 11989 ||| | |||| |||||||||| |||||||||| ||||| |||| |||| ||||| || |||||| ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC TCCGATAGGC 120 GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG GGGCACTAAG 11929 |||||||||| |||| |||| |||||||||| |||||||||| |||| ||||| ||| |||||| GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG 180 ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG AGGTTCATGT 11869 |||||||||| |||||||||| ||| |||| |||||| ||| ||| || || |||| ||||| ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT 240 CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC ACCAAACACC 11809 |||||||||| |||||||||| ||||| || |||||||| | |||||||||| ||||||||| CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC 300 CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT TTCTTTAGTC 11749 || ||||||| |||||||||| |||||||||| ||| |||||| | |||||||| |||||||||| CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC 360 GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG GAAATGCCAT 11689 |||||||||| |||||||||| |||||| ||| || || || | |||||||||| ||||| || GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG AAAATGTCAC 420 GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG GGTACCCGGA 11629 |||||||||| | ||||| || |||||||||| ||||||||| | | |||| |||||| ||| GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA GGTACCTGGA 480 GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT ATTGTTGCAC ACAAGGTCCA 11569 |||||||||| | |||||||| |||||| ||| |||||||||| |||||||||| ||||||||| GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC CCAAGGTCCA 540 TGTGGCCCTA CTGATTTGTC GAGATTTTTC AAACAAAGAT GTCCTGATGC GTATAGCTAC 11509 |||||||||| | || ||||| | ||||||| || |||||| |||| ||||| ||||||||| TGTGGCCCTA CAGAGTTGTC CAAATTTTTC AAGAAAAGAT GTCCCGATGC TTATAGCTAC 600 CCACAAGATG ATCCTACTAG CACATTTAC 11480 |||||||| | ||||||| || ||||||||| CCACAAGACG ATCCTACAAG CACATTTAC 629 hqPGS_C08HBa0235H18.1-_SGN-E276027+ (12108 11480) ******************************************************************************** EST sequence 844 +strand 624 n (File: SGN-E307742+) 1 GACATCTTCT TTTGTTCTCT TCTTCCTTCT TTGTGTGACT TATACTTATG CTGCCACTAT 61 TGAGGTACGC AACAACTGTC CATACACCGT TTGGGCGGCA TCGACTCCGA TAGGCGGTGG 121 TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 181 ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 241 TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 301 CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 361 ATTTAATATT CCAATGACTT TTGCCCCAAC AAAACCTAGT GGAGGAAAAT GTCACGCAAT 421 TCATTGCACG GCCAATATAA ATGGTGAATG TCCTCGCGCC CTTAAGGTAC CTGGAGGATG 481 TAACAACCCT TGTACCACGT TTGGAGGACA ACAATATTGT TGCACCCAAG GTCCATGTGG 541 CCCTACAGAG TTGTCCAAAT TTTTCAAGAA AAGATGTCCC GATGCTTATA GCTACCCACA 601 AGACGATCCT ACAAGCACAT TTAC Predicted gene structure (within gDNA segment 13684 to 10168): Exon 1 12103 11480 ( 624 n); cDNA 1 624 ( 624 n); score: 0.901 MATCH C08HBa0235H18.1- SGN-E307742+ 0.901 624 1.000 C PGS_C08HBa0235H18.1-_SGN-E307742+ (12103 11480) Alignment (genomic DNA sequence = upper lines): GAGATCTTCT TTTGTTTTCT TCCTTCTTGC TTTTGTGACT TACACTTATG CTGCCACTTT 12044 || ||||||| |||||| ||| || | ||| || ||||||| || ||||||| |||||||| | GACATCTTCT TTTGTTCTCT TCTTCCTTCT TTGTGTGACT TATACTTATG CTGCCACTAT 60 CGAGGTACGC AACAACTGTC CATACACCGT CTGGGCGGCG TCGACCCCAA TAGGCGGTGG 11984 ||||||||| |||||||||| |||||||||| |||||||| ||||| || | |||||||||| TGAGGTACGC AACAACTGTC CATACACCGT TTGGGCGGCA TCGACTCCGA TAGGCGGTGG 120 TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA CCGAGGGGCA CTAAGATGGC 11924 ||||||||| ||||||||| |||||||||| ||||||||| |||||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 180 ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT GGTAGAGGTT CATGTCAGAC 11864 |||||||||| |||||||| ||||||||| | ||| ||| || |||||| |||||||||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 240 TGGTGATTGT GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA ACACCCTGGC 11804 |||||||||| ||||| |||| | || ||||| ||| |||||| ||||| |||| ||||||| || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 300 CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 11744 |||||||||| |||||||||| |||||||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 360 ATTTAATATT CCAATGACTT TCGCCCCGAC CAATCCTAGT GGAGGGAAAT GCCATGCAAT 11684 |||||||||| |||||||||| | ||||| || || |||||| ||||| |||| | || ||||| ATTTAATATT CCAATGACTT TTGCCCCAAC AAAACCTAGT GGAGGAAAAT GTCACGCAAT 420 TCATTGTACG GCTAATATAA ATGGTGAATG TCCTGGTTCA CTTAGGGTAC CCGGAGGATG 11624 |||||| ||| || ||||||| |||||||||| |||| | | |||| ||||| | |||||||| TCATTGCACG GCCAATATAA ATGGTGAATG TCCTCGCGCC CTTAAGGTAC CTGGAGGATG 480 TAACAATCCT TGTACCACGT TCGGAGGACA ACAATATTGT TGCACACAAG GTCCATGTGG 11564 |||||| ||| |||||||||| | |||||||| |||||||||| ||||| |||| |||||||||| TAACAACCCT TGTACCACGT TTGGAGGACA ACAATATTGT TGCACCCAAG GTCCATGTGG 540 CCCTACTGAT TTGTCGAGAT TTTTCAAACA AAGATGTCCT GATGCGTATA GCTACCCACA 11504 |||||| || ||||| | || ||||||| | ||||||||| ||||| |||| |||||||||| CCCTACAGAG TTGTCCAAAT TTTTCAAGAA AAGATGTCCC GATGCTTATA GCTACCCACA 600 AGATGATCCT ACTAGCACAT TTAC 11480 ||| |||||| || ||||||| |||| AGACGATCCT ACAAGCACAT TTAC 624 hqPGS_C08HBa0235H18.1-_SGN-E307742+ (12103 11480) ******************************************************************************** EST sequence 737 +strand 604 n (File: SGN-E255554+) 1 TCTTCCTTCT TTGTGTGACT TATACTTATG CTGCCACTAT TGAGGTACGC AACAACTGTC 61 CATACACCGT TTGGGCGGCA TCGACTCCGA TAGGCGGTGG TCGACGTCTC AATCGAGGCC 121 AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC ACGTATATGG GGTCGTACTG 181 GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC TGGTGATTGT GGTGGAGTCT 241 TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC CGAGTACGCC TTGGACCAGT 301 TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG ATTTAATATT CCAATGACTT 361 TTGCCCCAAC AAAACCTAGT GGAGGAAAAT GTCACGCAAT TCATTGCACG GCCAATATAA 421 ATGGTGAATG TCCTCGCGCC CTTAAGGTAC CTGGAGGATG TAACAACCCT TGTACCACGT 481 TTGGAGGACA ACAATATTGT TGCACCCAAG GTCCATGTGG CCCTACAGAG TTGTCCAAAT 541 TTTTCAAGAA AAGATGTCCC GATGCTTATA GCTACCCACA AGACGATCCT ACAAGCACAT 601 TTAC Predicted gene structure (within gDNA segment 13484 to 10168): Exon 1 12083 11480 ( 604 n); cDNA 1 604 ( 604 n); score: 0.901 MATCH C08HBa0235H18.1- SGN-E255554+ 0.901 604 1.000 C PGS_C08HBa0235H18.1-_SGN-E255554+ (12083 11480) Alignment (genomic DNA sequence = upper lines): TCCTTCTTGC TTTTGTGACT TACACTTATG CTGCCACTTT CGAGGTACGC AACAACTGTC 12024 || | ||| || ||||||| || ||||||| |||||||| | ||||||||| |||||||||| TCTTCCTTCT TTGTGTGACT TATACTTATG CTGCCACTAT TGAGGTACGC AACAACTGTC 60 CATACACCGT CTGGGCGGCG TCGACCCCAA TAGGCGGTGG TCGACGTCTT GATCGAGGCC 11964 |||||||||| |||||||| ||||| || | |||||||||| ||||||||| ||||||||| CATACACCGT TTGGGCGGCA TCGACTCCGA TAGGCGGTGG TCGACGTCTC AATCGAGGCC 120 AAACATGGGT CATCAATGCA CCGAGGGGCA CTAAGATGGC ACGTATATGG GGTCGTACGA 11904 |||||||||| ||||||||| |||||||| | |||||||||| |||||||||| |||||||| AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC ACGTATATGG GGTCGTACTG 180 ATTGCAACTT TGATGGTGCT GGTAGAGGTT CATGTCAGAC TGGTGATTGT GGTGGGGTCT 11844 ||||||||| | ||| ||| || |||||| |||||||||| |||||||||| ||||| |||| GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC TGGTGATTGT GGTGGAGTCT 240 TGCAATGTAC CGGGTGGGGC AAACCACCAA ACACCCTGGC CGAGTACGCC TTGGACCAGT 11784 | || ||||| ||| |||||| ||||| |||| ||||||| || |||||||||| |||||||||| TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC CGAGTACGCC TTGGACCAGT 300 TTAGCAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG ATTTAATATT CCAATGACTT 11724 |||||||| | |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG ATTTAATATT CCAATGACTT 360 TCGCCCCGAC CAATCCTAGT GGAGGGAAAT GCCATGCAAT TCATTGTACG GCTAATATAA 11664 | ||||| || || |||||| ||||| |||| | || ||||| |||||| ||| || ||||||| TTGCCCCAAC AAAACCTAGT GGAGGAAAAT GTCACGCAAT TCATTGCACG GCCAATATAA 420 ATGGTGAATG TCCTGGTTCA CTTAGGGTAC CCGGAGGATG TAACAATCCT TGTACCACGT 11604 |||||||||| |||| | | |||| ||||| | |||||||| |||||| ||| |||||||||| ATGGTGAATG TCCTCGCGCC CTTAAGGTAC CTGGAGGATG TAACAACCCT TGTACCACGT 480 TCGGAGGACA ACAATATTGT TGCACACAAG GTCCATGTGG CCCTACTGAT TTGTCGAGAT 11544 | |||||||| |||||||||| ||||| |||| |||||||||| |||||| || ||||| | || TTGGAGGACA ACAATATTGT TGCACCCAAG GTCCATGTGG CCCTACAGAG TTGTCCAAAT 540 TTTTCAAACA AAGATGTCCT GATGCGTATA GCTACCCACA AGATGATCCT ACTAGCACAT 11484 ||||||| | ||||||||| ||||| |||| |||||||||| ||| |||||| || ||||||| TTTTCAAGAA AAGATGTCCC GATGCTTATA GCTACCCACA AGACGATCCT ACAAGCACAT 600 TTAC 11480 |||| TTAC 604 hqPGS_C08HBa0235H18.1-_SGN-E255554+ (12083 11480) ******************************************************************************** EST sequence 686 +strand 426 n (File: SGN-E203547+) 1 TGGTTGCAAC TTTAATGCTG CAGGCAGAGG TACATGTCAG ACTGGTGATT GTGGTGGAGT 61 CTTACAGTGT ACCGGATGGG GCAAACCCCC AAACACCCTA GCCGAGTACG CCTTGGACCA 121 GTTTAGCAAC TTAGATTTTT GGGACATTTC TTTAGTCGAT GGATTTAATA TTCCAATGAC 181 TTTTGCCCCA ACAAAACCTA GTGGAGGAAA ATGTCACGCA ATTCATTGCA CGGCCAATAT 241 AAATGGTGAA TGTCCTCGCG CCCTTAAGGT ACCTGGAGGA TGTAACAACC CTTGTACCAC 301 GTTTGGAGGA CAACAATATT GTTGCACCCA AGGTCCATGT GGCCCTACAG AGTTGTCCAA 361 ATTTTTCAAG AAAAGATGTC CCGATGCTTA TAGCTACCCA CAAGACGATC CTACAAGCAC 421 ATTTAC Predicted gene structure (within gDNA segment 13405 to 10168): Exon 1 11902 11480 ( 423 n); cDNA 4 426 ( 423 n); score: 0.903 MATCH C08HBa0235H18.1- SGN-E203547+ 0.903 423 0.993 C PGS_C08HBa0235H18.1-_SGN-E203547+ (11902 11480) Alignment (genomic DNA sequence = upper lines): TTGCAACTTT GATGGTGCTG GTAGAGGTTC ATGTCAGACT GGTGATTGTG GTGGGGTCTT 11843 |||||||||| ||| ||| | | |||||| | |||||||||| |||||||||| |||| ||||| TTGCAACTTT AATGCTGCAG GCAGAGGTAC ATGTCAGACT GGTGATTGTG GTGGAGTCTT 63 GCAATGTACC GGGTGGGGCA AACCACCAAA CACCCTGGCC GAGTACGCCT TGGACCAGTT 11783 || |||||| || ||||||| |||| ||||| |||||| ||| |||||||||| |||||||||| ACAGTGTACC GGATGGGGCA AACCCCCAAA CACCCTAGCC GAGTACGCCT TGGACCAGTT 123 TAGCAACCTA GATTTCTGGG ACATTTCTTT AGTCGATGGA TTTAATATTC CAATGACTTT 11723 ||||||| || ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| TAGCAACTTA GATTTTTGGG ACATTTCTTT AGTCGATGGA TTTAATATTC CAATGACTTT 183 CGCCCCGACC AATCCTAGTG GAGGGAAATG CCATGCAATT CATTGTACGG CTAATATAAA 11663 ||||| || || ||||||| |||| ||||| || |||||| ||||| |||| | |||||||| TGCCCCAACA AAACCTAGTG GAGGAAAATG TCACGCAATT CATTGCACGG CCAATATAAA 243 TGGTGAATGT CCTGGTTCAC TTAGGGTACC CGGAGGATGT AACAATCCTT GTACCACGTT 11603 |||||||||| ||| | | | ||| |||||| ||||||||| ||||| |||| |||||||||| TGGTGAATGT CCTCGCGCCC TTAAGGTACC TGGAGGATGT AACAACCCTT GTACCACGTT 303 CGGAGGACAA CAATATTGTT GCACACAAGG TCCATGTGGC CCTACTGATT TGTCGAGATT 11543 ||||||||| |||||||||| |||| ||||| |||||||||| ||||| || | |||| | ||| TGGAGGACAA CAATATTGTT GCACCCAAGG TCCATGTGGC CCTACAGAGT TGTCCAAATT 363 TTTCAAACAA AGATGTCCTG ATGCGTATAG CTACCCACAA GATGATCCTA CTAGCACATT 11483 |||||| || |||||||| | |||| ||||| |||||||||| || ||||||| | |||||||| TTTCAAGAAA AGATGTCCCG ATGCTTATAG CTACCCACAA GACGATCCTA CAAGCACATT 423 TAC 11480 ||| TAC 426 hqPGS_C08HBa0235H18.1-_SGN-E203547+ (11902 11480) ******************************************************************************** EST sequence 723 +strand 367 n (File: SGN-E301453+) 1 TCTTACAGTG TACCGGATGG GGCAAACCCC CAAACACCCT AGCCGAGTAC GCCTTGGACC 61 AGTTTAGCAA CTTAGATTTT TGGGACATTT CTTTAGTCGA TGGATTTAAT ATTCCAATGA 121 CTTTTGCCCC AACAAAACCT AGTGGAGGAA AATGTCACGC AATTCATTGC ACGGCCAATA 181 TAAATGGTGA ATGTCCTCGC GCCCTTAAGG TACCTGGAGG ATGTAACAAC CCTTGTACCA 241 CGTTTGGAGG ACAACAATAT TGTTGCACCC AAGGTCCATG TGGCCCTACA GAGTTGTCCA 301 AATTTTTCAA GAAAAGATGT CCCGATGCTT ATAGCTACCC ACAAGACGAT CCTACAAGCA 361 CATTTAC Predicted gene structure (within gDNA segment 12815 to 10168): Exon 1 11846 11480 ( 367 n); cDNA 1 367 ( 367 n); score: 0.905 MATCH C08HBa0235H18.1- SGN-E301453+ 0.905 367 1.000 C PGS_C08HBa0235H18.1-_SGN-E301453+ (11846 11480) Alignment (genomic DNA sequence = upper lines): TCTTGCAATG TACCGGGTGG GGCAAACCAC CAAACACCCT GGCCGAGTAC GCCTTGGACC 11787 |||| || || |||||| ||| |||||||| | |||||||||| ||||||||| |||||||||| TCTTACAGTG TACCGGATGG GGCAAACCCC CAAACACCCT AGCCGAGTAC GCCTTGGACC 60 AGTTTAGCAA CCTAGATTTC TGGGACATTT CTTTAGTCGA TGGATTTAAT ATTCCAATGA 11727 |||||||||| | ||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTTAGCAA CTTAGATTTT TGGGACATTT CTTTAGTCGA TGGATTTAAT ATTCCAATGA 120 CTTTCGCCCC GACCAATCCT AGTGGAGGGA AATGCCATGC AATTCATTGT ACGGCTAATA 11667 |||| ||||| || || ||| |||||||| | |||| || || ||||||||| ||||| |||| CTTTTGCCCC AACAAAACCT AGTGGAGGAA AATGTCACGC AATTCATTGC ACGGCCAATA 180 TAAATGGTGA ATGTCCTGGT TCACTTAGGG TACCCGGAGG ATGTAACAAT CCTTGTACCA 11607 |||||||||| ||||||| | | |||| || |||| ||||| ||||||||| |||||||||| TAAATGGTGA ATGTCCTCGC GCCCTTAAGG TACCTGGAGG ATGTAACAAC CCTTGTACCA 240 CGTTCGGAGG ACAACAATAT TGTTGCACAC AAGGTCCATG TGGCCCTACT GATTTGTCGA 11547 |||| ||||| |||||||||| |||||||| | |||||||||| ||||||||| || ||||| | CGTTTGGAGG ACAACAATAT TGTTGCACCC AAGGTCCATG TGGCCCTACA GAGTTGTCCA 300 GATTTTTCAA ACAAAGATGT CCTGATGCGT ATAGCTACCC ACAAGATGAT CCTACTAGCA 11487 ||||||||| |||||||| || ||||| | |||||||||| |||||| ||| ||||| |||| AATTTTTCAA GAAAAGATGT CCCGATGCTT ATAGCTACCC ACAAGACGAT CCTACAAGCA 360 CATTTAC 11480 ||||||| CATTTAC 367 hqPGS_C08HBa0235H18.1-_SGN-E301453+ (11846 11480) ******************************************************************************** EST sequence 999 +strand 463 n (File: SGN-E354546+) 1 TCATCAATGC ACCGAGGGGC ACTAAGATGG CACGTATATG GGGTCGTACG AATTGCAACT 61 TTGATGGTGC TGGTAGAGGT TCATGTCAGA CTGGTGATTG TGGTGGGGTC TTGCAATGTA 121 CCGGGTGGGG CAAACCACCA AACACCCTGG CCGAGTACGC CTTGGACCAG TTTAGCAACC 181 TAGATTTCTG GGACATTTCT TTAGTCGATG GATTTAATAT TCCAATGACT TTCGCCCCGA 241 CCAATCCTAG TGGAGGGAAA TGCCATGCAA TTCATTGTAC GGCTAATATA AATGGTGAAT 301 GTCCTGGTTC ACTTAGGGTA CCCCGGAGGA TGTAACAATC CTTGTACCAC GTTCGGAGGA 361 CAACAATATT GTTGCACACA AGGTCCATGT GGCCCTACTG ATTTGTCGAG ATTTTTCAAA 421 CAAGATGTCC TGATGCGTAT AGCTACCCAC AGATGATCCT ACT Predicted gene structure (within gDNA segment 12554 to 10774): Exon 1 11954 11491 ( 464 n); cDNA 1 463 ( 463 n); score: 0.990 MATCH C08HBa0235H18.1- SGN-E354546+ 0.990 464 1.002 C PGS_C08HBa0235H18.1-_SGN-E354546+ (11954 11491) Alignment (genomic DNA sequence = upper lines): TCATCAATGC ACCGAGGGGC ACTAAGATGG CACGTATATG GGGTCGTACG AATTGCAACT 11895 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCATCAATGC ACCGAGGGGC ACTAAGATGG CACGTATATG GGGTCGTACG AATTGCAACT 60 TTGATGGTGC TGGTAGAGGT TCATGTCAGA CTGGTGATTG TGGTGGGGTC TTGCAATGTA 11835 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATGGTGC TGGTAGAGGT TCATGTCAGA CTGGTGATTG TGGTGGGGTC TTGCAATGTA 120 CCGGGTGGGG CAAACCACCA AACACCCTGG CCGAGTACGC CTTGGACCAG TTTAGCAACC 11775 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGGGTGGGG CAAACCACCA AACACCCTGG CCGAGTACGC CTTGGACCAG TTTAGCAACC 180 TAGATTTCTG GGACATTTCT TTAGTCGATG GATTTAATAT TCCAATGACT TTCGCCCCGA 11715 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGATTTCTG GGACATTTCT TTAGTCGATG GATTTAATAT TCCAATGACT TTCGCCCCGA 240 CCAATCCTAG TGGAGGGAAA TGCCATGCAA TTCATTGTAC GGCTAATATA AATGGTGAAT 11655 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAATCCTAG TGGAGGGAAA TGCCATGCAA TTCATTGTAC GGCTAATATA AATGGTGAAT 300 GTCCTGGTTC ACTTAGGGTA -CCCGGAGGA TGTAACAATC CTTGTACCAC GTTCGGAGGA 11596 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| GTCCTGGTTC ACTTAGGGTA CCCCGGAGGA TGTAACAATC CTTGTACCAC GTTCGGAGGA 360 CAACAATATT GTTGCACACA AGGTCCATGT GGCCCTACTG ATTTGTCGAG ATTTTTCAAA 11536 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACAATATT GTTGCACACA AGGTCCATGT GGCCCTACTG ATTTGTCGAG ATTTTTCAAA 420 CAAAGATGTC CTGATGCGTA TAGCTACCCA CAAGATGATC CTACT 11491 | |||||||| |||||||||| |||||||||| | |||||||| ||||| C-AAGATGTC CTGATGCGTA TAGCTACCCA C-AGATGATC CTACT 463 hqPGS_C08HBa0235H18.1-_SGN-E354546+ (11954 11491) ******************************************************************************** EST sequence 976 +strand 389 n (File: SGN-E206738+) 1 CAGAGGTACA TGTCACACTG GTGATTGTGG TGGAGTCTTA CAGTGTACCG GATGGGGCAA 61 ACCCCCAAAC ACCCTAACCG AGTACGCCTT GGACCAGTTT AGCAACTTAG ATTTTTGGGA 121 CATTTCTTTA GTCGATGGAT TTAATATTCC AATGACTTTT GCCCCAACAA AACCTAGTGG 181 AGGAAAATGT CACGCAATTC ATTGCACGGG CAATATAAAT GGTGAATGTC CTCGCGCCCT 241 TAAGGTACCT GGAGGATGTA ACAACCCTTG TACCACGTTT GGAGGACAAC AATATTGTTG 301 CACCCAATGT CCATGTGGCC CTACAGAGTT GTCCAAATTT TTCAAGAAAA GATGTCCCGA 361 TGCTTATAGC TACCCACAAG ACGATCCTA Predicted gene structure (within gDNA segment 13174 to 10298): Exon 1 11880 11493 ( 388 n); cDNA 2 389 ( 388 n); score: 0.897 MATCH C08HBa0235H18.1- SGN-E206738+ 0.897 388 0.997 C PGS_C08HBa0235H18.1-_SGN-E206738+ (11880 11493) Alignment (genomic DNA sequence = upper lines): AGAGGTTCAT GTCAGACTGG TGATTGTGGT GGGGTCTTGC AATGTACCGG GTGGGGCAAA 11821 |||||| ||| |||| ||||| |||||||||| || ||||| | | |||||||| ||||||||| AGAGGTACAT GTCACACTGG TGATTGTGGT GGAGTCTTAC AGTGTACCGG ATGGGGCAAA 61 CCACCAAACA CCCTGGCCGA GTACGCCTTG GACCAGTTTA GCAACCTAGA TTTCTGGGAC 11761 || ||||||| |||| |||| |||||||||| |||||||||| ||||| |||| ||| |||||| CCCCCAAACA CCCTAACCGA GTACGCCTTG GACCAGTTTA GCAACTTAGA TTTTTGGGAC 121 ATTTCTTTAG TCGATGGATT TAATATTCCA ATGACTTTCG CCCCGACCAA TCCTAGTGGA 11701 |||||||||| |||||||||| |||||||||| |||||||| | |||| || || ||||||||| ATTTCTTTAG TCGATGGATT TAATATTCCA ATGACTTTTG CCCCAACAAA ACCTAGTGGA 181 GGGAAATGCC ATGCAATTCA TTGTACGGCT AATATAAATG GTGAATGTCC TGGTTCACTT 11641 || ||||| | | |||||||| ||| |||| |||||||||| |||||||||| | | | ||| GGAAAATGTC ACGCAATTCA TTGCACGGGC AATATAAATG GTGAATGTCC TCGCGCCCTT 241 AGGGTACCCG GAGGATGTAA CAATCCTTGT ACCACGTTCG GAGGACAACA ATATTGTTGC 11581 | |||||| | |||||||||| ||| |||||| |||||||| | |||||||||| |||||||||| AAGGTACCTG GAGGATGTAA CAACCCTTGT ACCACGTTTG GAGGACAACA ATATTGTTGC 301 ACACAAGGTC CATGTGGCCC TACTGATTTG TCGAGATTTT TCAAACAAAG ATGTCCTGAT 11521 || ||| ||| |||||||||| ||| || ||| || | ||||| |||| |||| |||||| ||| ACCCAATGTC CATGTGGCCC TACAGAGTTG TCCAAATTTT TCAAGAAAAG ATGTCCCGAT 361 GCGTATAGCT ACCCACAAGA TGATCCTA 11493 || ||||||| |||||||||| ||||||| GCTTATAGCT ACCCACAAGA CGATCCTA 389 hqPGS_C08HBa0235H18.1-_SGN-E206738+ (11880 11493) ******************************************************************************** EST sequence 1191 +strand 619 n (File: SGN-E209843+) 1 TTTATTCTAA AATGAGTCAT TTGACAACTT GTTTAGTGTT CTTTCTCCTT GCCTTTGTGA 61 CTTACACTTA TGCTTCCGGT GTATTTGAGG TCCATAACAA CTGTCCATAC ACCGTATGGG 121 CAGCGGCGAC TCCCGTAGGA GGTGGCCGAC GTCTCGAGAG AGGTCAAAGT TGGTGGTTTT 181 GGGCTCCACC GGGCACCAAA ATGGCACGTA TTTGGGGTCG TACTAATTGC AATTTTGATG 241 GTGCTGGTAG AGGTTGGTGC CAGACCGGTG ATTGTGGTGG AGTCTTGGAA TGCAAAGGAT 301 GGGGTAAACC ACCAAACACC TTAGCTGAAT ACGCTTTGAA TCAATTTAGC AACTTAGATT 361 TCTGGGACAT TTCTGTTATT GATGGATTCA ACATCCCTAT GTCTTTCGGC CCAACTAACC 421 CTGGGCCGGG AAAATGTCAT CCAATTCAAT GTGTTGCTAA TATAAACGGT GAATGCCCTG 481 GTTCACTTAG GGTACCCGGA GGATGTAACA ACCCTTGTAC TACATTCGGA GGACAACAAT 541 ATTGTTGCAC TCAAGGTCCA TGTGGTCCTA CCGATTTGTC AAGATTTTTC AAACAAAGAT 601 GTCCCGATGC CTATAGTTA Predicted gene structure (within gDNA segment 17012 to 10279): Exon 1 12124 11510 ( 615 n); cDNA 2 619 ( 618 n); score: 0.804 MATCH C08HBa0235H18.1- SGN-E209843+ 0.804 615 0.994 C PGS_C08HBa0235H18.1-_SGN-E209843+ (12124 11510) Alignment (genomic DNA sequence = upper lines): TTCCACAAAC ATGGCCTACT TGAGATCTTC TTTTGTTTTC TTCCTTCTTG CTTTTGTGAC 12065 || | || ||| | | ||| | ||| ||| || ||| || || |||| | |||||||| TTATTCTAAA ATGAGTCATT TGACAACTTG TTTAGTGTTC TTTCTCCTTG CCTTTGTGAC 61 TTACACTTAT GCTGCCACT- T-T-CGAGGT ACGCAACAAC TGTCCATACA CCGTCTGGGC 12008 |||||||||| ||| || | | | ||||| | |||||| |||||||||| |||| ||||| TTACACTTAT GCTTCCGGTG TATTTGAGGT CCATAACAAC TGTCCATACA CCGTATGGGC 121 GGCGTCGACC CCAATAGGCG GTGGTCGACG TCTTGATCGA GGCCAAACAT GGGTCATCAA 11948 ||| |||| || |||| | |||| ||||| ||| || || || |||| | || | AGCGGCGACT CCCGTAGGAG GTGGCCGACG TCTCGAGAGA GGTCAAAGTT GGTGGTTTTG 181 TGCACCGAGG GGCACTAAGA TGGCACGTAT ATGGGGTCGT ACGAATTGCA ACTTTGATGG 11888 || || | ||||| || | |||||||||| ||||||||| || ||||||| | |||||||| GGCTCCACCG GGCACCAAAA TGGCACGTAT TTGGGGTCGT ACTAATTGCA ATTTTGATGG 241 TGCTGGTAGA GGTTCATGTC AGACTGGTGA TTGTGGTGGG GTCTTGCAAT GTACCGGGTG 11828 |||||||||| |||| || | |||| ||||| ||||||||| |||||| ||| | | || || TGCTGGTAGA GGTTGGTGCC AGACCGGTGA TTGTGGTGGA GTCTTGGAAT GCAAAGGATG 301 GGGCAAACCA CCAAACACCC TGGCCGAGTA CGCCTTGGAC CAGTTTAGCA ACCTAGATTT 11768 ||| |||||| ||||||||| | || || || ||| ||| | || ||||||| || ||||||| GGGTAAACCA CCAAACACCT TAGCTGAATA CGCTTTGAAT CAATTTAGCA ACTTAGATTT 361 CTGGGACATT TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTCGCCC CGACCAATCC 11708 |||||||||| ||| | | | ||||||| || || || ||| |||||| || | || || || CTGGGACATT TCTGTTATTG ATGGATTCAA CATCCCTATG TCTTTCGGCC CAACTAACCC 421 TAGTGGAGGG AAATGCCATG CAATTCATTG TACGGCTAAT ATAAATGGTG AATGTCCTGG 11648 | | || ||||| ||| ||||||| || | |||||| ||||| |||| |||| ||||| TGGGCCGGGA AAATGTCATC CAATTCAATG TGTTGCTAAT ATAAACGGTG AATGCCCTGG 481 TTCACTTAGG GTACCCGGAG GATGTAACAA TCCTTGTACC ACGTTCGGAG GACAACAATA 11588 |||||||||| |||||||||| |||||||||| |||||||| || ||||||| |||||||||| TTCACTTAGG GTACCCGGAG GATGTAACAA CCCTTGTACT ACATTCGGAG GACAACAATA 541 TTGTTGCACA CAAGGTCCAT GTGGCCCTAC TGATTTGTCG AGATTTTTCA AACAAAGATG 11528 ||||||||| |||||||||| |||| ||||| |||||||| |||||||||| |||||||||| TTGTTGCACT CAAGGTCCAT GTGGTCCTAC CGATTTGTCA AGATTTTTCA AACAAAGATG 601 TCCTGATGCG TATAGCTA 11510 ||| ||||| ||||| || TCCCGATGCC TATAGTTA 619 hqPGS_C08HBa0235H18.1-_SGN-E209843+ (12124 11510) ******************************************************************************** EST sequence 479 +strand 530 n (File: SGN-E336261+) 1 TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 61 GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 121 CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 181 CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 241 CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG 301 GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 361 TTCATTGCAC GGCCAATATA AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT 421 GTAACAACCC TTGTACCACG TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG 481 GCCCTACAGA GTTGTCCAAA TTTTTCAAGA AAAGATGTCC CGATGCTTAT Predicted gene structure (within gDNA segment 13094 to 10518): Exon 1 12042 11515 ( 528 n); cDNA 3 530 ( 528 n); score: 0.905 MATCH C08HBa0235H18.1- SGN-E336261+ 0.905 528 0.996 C PGS_C08HBa0235H18.1-_SGN-E336261+ (12042 11515) Alignment (genomic DNA sequence = upper lines): GAGGTACGCA ACAACTGTCC ATACACCGTC TGGGCGGCGT CGACCCCAAT AGGCGGTGGT 11983 |||||||||| |||||||||| ||||||||| |||||||| | |||| || || |||||||||| GAGGTACGCA ACAACTGTCC ATACACCGTT TGGGCGGCAT CGACTCCGAT AGGCGGTGGT 62 CGACGTCTTG ATCGAGGCCA AACATGGGTC ATCAATGCAC CGAGGGGCAC TAAGATGGCA 11923 |||||||| |||||||||| |||||||||| |||||||| | ||||||| || |||||||||| CGACGTCTCA ATCGAGGCCA AACATGGGTC ATCAATGCTC CGAGGGGAAC TAAGATGGCA 122 CGTATATGGG GTCGTACGAA TTGCAACTTT GATGGTGCTG GTAGAGGTTC ATGTCAGACT 11863 |||||||||| ||||||| |||||||||| ||| ||| | | |||||| | |||||||||| CGTATATGGG GTCGTACTGG TTGCAACTTT AATGCTGCAG GCAGAGGTAC ATGTCAGACT 182 GGTGATTGTG GTGGGGTCTT GCAATGTACC GGGTGGGGCA AACCACCAAA CACCCTGGCC 11803 |||||||||| |||| ||||| || |||||| || ||||||| |||| ||||| |||||| ||| GGTGATTGTG GTGGAGTCTT ACAGTGTACC GGATGGGGCA AACCCCCAAA CACCCTAGCC 242 GAGTACGCCT TGGACCAGTT TAGCAACCTA GATTTCTGGG ACATTTCTTT AGTCGATGGA 11743 |||||||||| |||||||||| ||||||| || ||||| |||| |||||||||| |||||||||| GAGTACGCCT TGGACCAGTT TAGCAACTTA GATTTTTGGG ACATTTCTTT AGTCGATGGA 302 TTTAATATTC CAATGACTTT CGCCCCGACC AATCCTAGTG GAGGGAAATG CCATGCAATT 11683 |||||||||| |||||||||| ||||| || || ||||||| |||| ||||| || |||||| TTTAATATTC CAATGACTTT TGCCCCAACA AAACCTAGTG GAGGAAAATG TCACGCAATT 362 CATTGTACGG CTAATATAAA TGGTGAATGT CCTGGTTCAC TTAGGGTACC CGGAGGATGT 11623 ||||| |||| | |||||||| |||||||||| ||| | | | ||| |||||| ||||||||| CATTGCACGG CCAATATAAA TGGTGAATGT CCTCGCGCCC TTAAGGTACC TGGAGGATGT 422 AACAATCCTT GTACCACGTT CGGAGGACAA CAATATTGTT GCACACAAGG TCCATGTGGC 11563 ||||| |||| |||||||||| ||||||||| |||||||||| |||| ||||| |||||||||| AACAACCCTT GTACCACGTT TGGAGGACAA CAATATTGTT GCACCCAAGG TCCATGTGGC 482 CCTACTGATT TGTCGAGATT TTTCAAACAA AGATGTCCTG ATGCGTAT 11515 ||||| || | |||| | ||| |||||| || |||||||| | |||| ||| CCTACAGAGT TGTCCAAATT TTTCAAGAAA AGATGTCCCG ATGCTTAT 530 hqPGS_C08HBa0235H18.1-_SGN-E336261+ (12042 11515) ******************************************************************************** EST sequence 1089 +strand 283 n (File: SGN-E258498+) 1 CGCCTTGGAC CAGTTTAGCA ACTTAGATTT TTGGGACATT TCTTTAGTCG ATGGATTTAA 61 TATTCCAATG ACTTTTGCCC CAACAAAACC TAGTGGAGGA AAATGTCACG CAATTCATTG 121 CACGGCCAAT ATAAATGGTG AATGTCCTCG CGCCCTTAAG GTACCTGGAG GATGTAACAA 181 CCCTTGTACC ACGTTTGGAG GACAACAATA TTGTTGCACC CAAGGTCCAT GTGGCCCTAC 241 AGAGTTGTCC AAATTTTTCA AGAAAAGATG TCCCGATGCT TAT Predicted gene structure (within gDNA segment 12397 to 10518): Exon 1 11797 11515 ( 283 n); cDNA 1 283 ( 283 n); score: 0.901 MATCH C08HBa0235H18.1- SGN-E258498+ 0.901 283 1.000 C PGS_C08HBa0235H18.1-_SGN-E258498+ (11797 11515) Alignment (genomic DNA sequence = upper lines): CGCCTTGGAC CAGTTTAGCA ACCTAGATTT CTGGGACATT TCTTTAGTCG ATGGATTTAA 11738 |||||||||| |||||||||| || ||||||| ||||||||| |||||||||| |||||||||| CGCCTTGGAC CAGTTTAGCA ACTTAGATTT TTGGGACATT TCTTTAGTCG ATGGATTTAA 60 TATTCCAATG ACTTTCGCCC CGACCAATCC TAGTGGAGGG AAATGCCATG CAATTCATTG 11678 |||||||||| ||||| |||| | || || || ||||||||| ||||| || | |||||||||| TATTCCAATG ACTTTTGCCC CAACAAAACC TAGTGGAGGA AAATGTCACG CAATTCATTG 120 TACGGCTAAT ATAAATGGTG AATGTCCTGG TTCACTTAGG GTACCCGGAG GATGTAACAA 11618 ||||| ||| |||||||||| |||||||| | | |||| | ||||| |||| |||||||||| CACGGCCAAT ATAAATGGTG AATGTCCTCG CGCCCTTAAG GTACCTGGAG GATGTAACAA 180 TCCTTGTACC ACGTTCGGAG GACAACAATA TTGTTGCACA CAAGGTCCAT GTGGCCCTAC 11558 ||||||||| ||||| |||| |||||||||| ||||||||| |||||||||| |||||||||| CCCTTGTACC ACGTTTGGAG GACAACAATA TTGTTGCACC CAAGGTCCAT GTGGCCCTAC 240 TGATTTGTCG AGATTTTTCA AACAAAGATG TCCTGATGCG TAT 11515 || ||||| | |||||||| | ||||||| ||| ||||| ||| AGAGTTGTCC AAATTTTTCA AGAAAAGATG TCCCGATGCT TAT 283 hqPGS_C08HBa0235H18.1-_SGN-E258498+ (11797 11515) ******************************************************************************** EST sequence 786 +strand 264 n (File: SGN-E251433+) 1 CAACTTAGAT TTTTGGGACA TTTCTTTAGT CGATGGATTT AATATTCCAA TGACTTTTGC 61 CCCAACAAAA CCTAGTGGAG GAAAATGTCA CGCAATTCAT TGCACGGCCA ATATAAATGG 121 TGAATGTCCT CGCGCCCTTA AGGTACCTGG AGGATGTAAC AACCCTTGTA CCACGTTTGG 181 AGGACAACAA TATTGTTGCA CCCAAGGTCC ATGTGGCCCT ACAGAGTTGT CCAAATTTTT 241 CAAGAAAAGA TGTCCCGATG CTTA Predicted gene structure (within gDNA segment 12496 to 10528): Exon 1 11779 11516 ( 264 n); cDNA 1 264 ( 264 n); score: 0.894 MATCH C08HBa0235H18.1- SGN-E251433+ 0.894 264 1.000 C PGS_C08HBa0235H18.1-_SGN-E251433+ (11779 11516) Alignment (genomic DNA sequence = upper lines): CAACCTAGAT TTCTGGGACA TTTCTTTAGT CGATGGATTT AATATTCCAA TGACTTTCGC 11720 |||| ||||| || ||||||| |||||||||| |||||||||| |||||||||| ||||||| || CAACTTAGAT TTTTGGGACA TTTCTTTAGT CGATGGATTT AATATTCCAA TGACTTTTGC 60 CCCGACCAAT CCTAGTGGAG GGAAATGCCA TGCAATTCAT TGTACGGCTA ATATAAATGG 11660 ||| || || |||||||||| | ||||| || ||||||||| || ||||| | |||||||||| CCCAACAAAA CCTAGTGGAG GAAAATGTCA CGCAATTCAT TGCACGGCCA ATATAAATGG 120 TGAATGTCCT GGTTCACTTA GGGTACCCGG AGGATGTAAC AATCCTTGTA CCACGTTCGG 11600 |||||||||| | | |||| |||||| || |||||||||| || ||||||| ||||||| || TGAATGTCCT CGCGCCCTTA AGGTACCTGG AGGATGTAAC AACCCTTGTA CCACGTTTGG 180 AGGACAACAA TATTGTTGCA CACAAGGTCC ATGTGGCCCT ACTGATTTGT CGAGATTTTT 11540 |||||||||| |||||||||| | |||||||| |||||||||| || || |||| | | |||||| AGGACAACAA TATTGTTGCA CCCAAGGTCC ATGTGGCCCT ACAGAGTTGT CCAAATTTTT 240 CAAACAAAGA TGTCCTGATG CGTA 11516 ||| ||||| ||||| |||| | || CAAGAAAAGA TGTCCCGATG CTTA 264 hqPGS_C08HBa0235H18.1-_SGN-E251433+ (11779 11516) ******************************************************************************** EST sequence 458 +strand 583 n (File: SGN-E211899+) 1 TCTTCTTTTG TTCTCTTCTT CCTTCTTTGT GTGACTTATA CTTATGCTGC CACTATTGAG 61 GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA CTCCGATAGG CGGTGGTCGA 121 CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA GGGGAACTAA GATGGCACGT 181 ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA GAGGTACATG TCAGACTGGT 241 GATTGTGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC CCCCAAACAC CCTAGCCGAG 301 TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA TTTCTTTAGT CGATGGATTT 361 AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG GAAAATGTCA CGCAATTCAT 421 TGCACGGCCA ATATAAATGG TGAATGTCCT CGCGCCCTTA AGGTACCTGG AGGATGTAAC 481 AACCCTTGTA CCACGTTTGG AGGACNACAA TATTGTTGCA CCCAAAGTCC ATGTGGCCCT 541 ACAGAGTTGT CCAAATTTTT CAAGAAAAGA TGTCCCGATG CTT Predicted gene structure (within gDNA segment 13644 to 9053): Exon 1 12099 11519 ( 581 n); cDNA 1 581 ( 581 n); score: 0.897 MATCH C08HBa0235H18.1- SGN-E211899+ 0.897 581 0.997 C PGS_C08HBa0235H18.1-_SGN-E211899+ (12099 11519) Alignment (genomic DNA sequence = upper lines): TCTTCTTTTG TTTTCTTCCT TCTTGCTTTT GTGACTTACA CTTATGCTGC CACTTTCGAG 12040 |||||||||| || ||||| | ||| || | |||||||| | |||||||||| |||| | ||| TCTTCTTTTG TTCTCTTCTT CCTTCTTTGT GTGACTTATA CTTATGCTGC CACTATTGAG 60 GTACGCAACA ACTGTCCATA CACCGTCTGG GCGGCGTCGA CCCCAATAGG CGGTGGTCGA 11980 |||||||||| |||||||||| |||||| ||| ||||| |||| | || ||||| |||||||||| GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA CTCCGATAGG CGGTGGTCGA 120 CGTCTTGATC GAGGCCAAAC ATGGGTCATC AATGCACCGA GGGGCACTAA GATGGCACGT 11920 ||||| ||| |||||||||| |||||||||| ||||| |||| |||| ||||| |||||||||| CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA GGGGAACTAA GATGGCACGT 180 ATATGGGGTC GTACGAATTG CAACTTTGAT GGTGCTGGTA GAGGTTCATG TCAGACTGGT 11860 |||||||||| |||| ||| ||||||| || | ||| || | ||||| |||| |||||||||| ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA GAGGTACATG TCAGACTGGT 240 GATTGTGGTG GGGTCTTGCA ATGTACCGGG TGGGGCAAAC CACCAAACAC CCTGGCCGAG 11800 |||||||||| | ||||| || |||||||| |||||||||| | |||||||| ||| |||||| GATTGTGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC CCCCAAACAC CCTAGCCGAG 300 TACGCCTTGG ACCAGTTTAG CAACCTAGAT TTCTGGGACA TTTCTTTAGT CGATGGATTT 11740 |||||||||| |||||||||| |||| ||||| || ||||||| |||||||||| |||||||||| TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA TTTCTTTAGT CGATGGATTT 360 AATATTCCAA TGACTTTCGC CCCGACCAAT CCTAGTGGAG GGAAATGCCA TGCAATTCAT 11680 |||||||||| ||||||| || ||| || || |||||||||| | ||||| || ||||||||| AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG GAAAATGTCA CGCAATTCAT 420 TGTACGGCTA ATATAAATGG TGAATGTCCT GGTTCACTTA GGGTACCCGG AGGATGTAAC 11620 || ||||| | |||||||||| |||||||||| | | |||| |||||| || |||||||||| TGCACGGCCA ATATAAATGG TGAATGTCCT CGCGCCCTTA AGGTACCTGG AGGATGTAAC 480 AATCCTTGTA CCACGTTCGG AGGACAACAA TATTGTTGCA CACAAGGTCC ATGTGGCCCT 11560 || ||||||| ||||||| || ||||| |||| |||||||||| | ||| |||| |||||||||| AACCCTTGTA CCACGTTTGG AGGACNACAA TATTGTTGCA CCCAAAGTCC ATGTGGCCCT 540 ACTGATTTGT CGAGATTTTT CAAACAAAGA TGTCCTGATG C 11519 || || |||| | | |||||| ||| ||||| ||||| |||| | ACAGAGTTGT CCAAATTTTT CAAGAAAAGA TGTCCCGATG C 581 hqPGS_C08HBa0235H18.1-_SGN-E211899+ (12099 11519) ******************************************************************************** EST sequence 952 +strand 597 n (File: SGN-E207039+) 1 TTTTATTCTA AAATGAGTCA TTTGACAACT TGTTTAGTGT TCTTTCTCCT TGCCTTTGTG 61 ACTTACACTT ATGCTTCCGG TGTATTTGAG GTCCATAACA ACTGTCCATA CACCGTATGG 121 GCAGCGGCGA CTCCCGTAGG AGGTGGCCGA CGTCTCGAGA GAGGTCAAAG TTGGTGGTTT 181 TGGGCTCCAC CGGGCACCAA AATGGCACGT ATTTGGGGTC GTACTAATTG CAATTTTGAT 241 GGTGCTGGTA GAGGTTGGTG CCAGACCGGT GATTGTGGTG GAGTCTTGGA ATGCAAAGGA 301 TGGGGTAAAC CACCAAACAC CTTAGCTGAA TACGCTTTGA ATCAATTTAG CAACTTAGAT 361 TTCTGGGACA TTTCTGTTAT TGATGGATTC AACATCCCTA TGTCTTTCGG CCCAACTAAC 421 CCTGGGCCGG GAAAATGTCA TCCAATTCAA TGTGTTGCTA ATATAAACGG TGAATGCCCT 481 GGTTCACTTA GGGTACCCGG AGGATGTAAC AACCCTTGTA CTACATTCGG AGGACAACAA 541 TATTGTTGCA CTTAAGGTCC ATGTGGTCCT ACCGATTTGT CAAGATTTTT TCAAACA Predicted gene structure (within gDNA segment 17022 to 10509): Exon 1 12124 11534 ( 591 n); cDNA 3 597 ( 595 n); score: 0.795 MATCH C08HBa0235H18.1- SGN-E207039+ 0.795 591 0.990 C PGS_C08HBa0235H18.1-_SGN-E207039+ (12124 11534) Alignment (genomic DNA sequence = upper lines): TTCCACAAAC ATGGCCTACT TGAGATCTTC TTTTGTTTTC TTCCTTCTTG CTTTTGTGAC 12065 || | || ||| | | ||| | ||| ||| || ||| || || |||| | |||||||| TTATTCTAAA ATGAGTCATT TGACAACTTG TTTAGTGTTC TTTCTCCTTG CCTTTGTGAC 62 TTACACTTAT GCTGCCACT- T-T-CGAGGT ACGCAACAAC TGTCCATACA CCGTCTGGGC 12008 |||||||||| ||| || | | | ||||| | |||||| |||||||||| |||| ||||| TTACACTTAT GCTTCCGGTG TATTTGAGGT CCATAACAAC TGTCCATACA CCGTATGGGC 122 GGCGTCGACC CCAATAGGCG GTGGTCGACG TCTTGATCGA GGCCAAACAT GGGTCATCAA 11948 ||| |||| || |||| | |||| ||||| ||| || || || |||| | || | AGCGGCGACT CCCGTAGGAG GTGGCCGACG TCTCGAGAGA GGTCAAAGTT GGTGGTTTTG 182 TGCACCGAGG GGCACTAAGA TGGCACGTAT ATGGGGTCGT ACGAATTGCA ACTTTGATGG 11888 || || | ||||| || | |||||||||| ||||||||| || ||||||| | |||||||| GGCTCCACCG GGCACCAAAA TGGCACGTAT TTGGGGTCGT ACTAATTGCA ATTTTGATGG 242 TGCTGGTAGA GGTTCATGTC AGACTGGTGA TTGTGGTGGG GTCTTGCAAT GTACCGGGTG 11828 |||||||||| |||| || | |||| ||||| ||||||||| |||||| ||| | | || || TGCTGGTAGA GGTTGGTGCC AGACCGGTGA TTGTGGTGGA GTCTTGGAAT GCAAAGGATG 302 GGGCAAACCA CCAAACACCC TGGCCGAGTA CGCCTTGGAC CAGTTTAGCA ACCTAGATTT 11768 ||| |||||| ||||||||| | || || || ||| ||| | || ||||||| || ||||||| GGGTAAACCA CCAAACACCT TAGCTGAATA CGCTTTGAAT CAATTTAGCA ACTTAGATTT 362 CTGGGACATT TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTCGCCC CGACCAATCC 11708 |||||||||| ||| | | | ||||||| || || || ||| |||||| || | || || || CTGGGACATT TCTGTTATTG ATGGATTCAA CATCCCTATG TCTTTCGGCC CAACTAACCC 422 TAGTGGAGGG AAATGCCATG CAATTCATTG TACGGCTAAT ATAAATGGTG AATGTCCTGG 11648 | | || ||||| ||| ||||||| || | |||||| ||||| |||| |||| ||||| TGGGCCGGGA AAATGTCATC CAATTCAATG TGTTGCTAAT ATAAACGGTG AATGCCCTGG 482 TTCACTTAGG GTACCCGGAG GATGTAACAA TCCTTGTACC ACGTTCGGAG GACAACAATA 11588 |||||||||| |||||||||| |||||||||| |||||||| || ||||||| |||||||||| TTCACTTAGG GTACCCGGAG GATGTAACAA CCCTTGTACT ACATTCGGAG GACAACAATA 542 TTGTTGCACA CAAGGTCCAT GTGGCCCTAC TGATTTGTCG AGA-TTTTTC AAACA 11534 ||||||||| ||||||||| |||| ||||| |||||||| ||| |||||| ||||| TTGTTGCACT TAAGGTCCAT GTGGTCCTAC CGATTTGTCA AGATTTTTTC AAACA 597 hqPGS_C08HBa0235H18.1-_SGN-E207039+ (12124 11534) ******************************************************************************** EST sequence 1108 +strand 561 n (File: SGN-E273742+) 1 AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 61 TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 121 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 181 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 241 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 301 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 361 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 421 AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 481 GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC 541 CCAAGGTCCA TGTGGCCCTA C Predicted gene structure (within gDNA segment 13834 to 10948): Exon 1 12118 11558 ( 561 n); cDNA 1 561 ( 561 n); score: 0.906 MATCH C08HBa0235H18.1- SGN-E273742+ 0.906 561 1.000 C PGS_C08HBa0235H18.1-_SGN-E273742+ (12118 11558) Alignment (genomic DNA sequence = upper lines): AAACATGGCC TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG TGACTTACAC 12059 |||||||| | ||||||| || |||||||||| | ||||| | ||| || || ||||||| || AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 60 TTATGCTGCC ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG CGGCGTCGAC 11999 |||||||||| ||| | |||| |||||||||| |||||||||| ||||| |||| |||| ||||| TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 120 CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG 11939 || |||||| |||||||||| |||| |||| |||||||||| |||||||||| |||| ||||| TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 180 GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG 11879 ||| |||||| |||||||||| |||||||||| ||| |||| |||||| ||| ||| || || GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 240 AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC 11819 |||| ||||| |||||||||| |||||||||| ||||| || |||||||| | |||||||||| AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 300 ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT 11759 ||||||||| || ||||||| |||||||||| |||||||||| ||| |||||| | |||||||| CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 360 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG 11699 |||||||||| |||||||||| |||||||||| |||||| ||| || || || | |||||||||| TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 420 GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG 11639 ||||| || |||||||||| | ||||| || |||||||||| ||||||||| | | |||| AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 480 GGTACCCGGA GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT ATTGTTGCAC 11579 |||||| ||| |||||||||| | |||||||| |||||| ||| |||||||||| |||||||||| GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC 540 ACAAGGTCCA TGTGGCCCTA C 11558 ||||||||| |||||||||| | CCAAGGTCCA TGTGGCCCTA C 561 hqPGS_C08HBa0235H18.1-_SGN-E273742+ (12118 11558) ******************************************************************************** EST sequence 1061 +strand 551 n (File: SGN-E210488+) 1 ACATGGGCTA CTTGACATCT TCTTTTGTTC TCTTCTTCCT TCTTTGTGTG ACTTATACTT 61 ATGCTGCCAC TATTGAGGTA CGCAACAACT GTCCATACAC CGTTTGGGCG GCATCGACTC 121 CGATAGGCGG TGGTCGACGT CTCAATCGAG GCCAAACATG GGTCATCAAT GCTCCGAGGG 181 GAACTAAGAT GGCACGTATA TGGGGTCGTA CTGGTTGCAA CTTTAATGCT GCAGGCAGAG 241 GTACATGTCA GACTGGTGAT TGTGGTGGAG TCTTACAGTG TACCGGATGG GGCAAACCCC 301 CAAACACCCT AGCCGAGTAC GCCTTGGACC AGTTTAGCAA CTTAGATTTT TGGGACATTT 361 CTTTAGTCGA TGGATTTAAT ATTCCAATGA CTTTTGCCCC AACAAAACCT AGTGGAGGAA 421 AATGTCACGC AATTCATTGC ACGGCCAATA TAAATGGTGA ATGTCCTCGC GCCCTTAAGG 481 TACCTGGAGG ATGTAACAAC CCTTGTACCA CGTTTGGAGG ACAACAATAT TGTTGCACCC 541 AAGGTCCATG T Predicted gene structure (within gDNA segment 13814 to 9543): Exon 1 12116 11566 ( 551 n); cDNA 1 551 ( 551 n); score: 0.904 MATCH C08HBa0235H18.1- SGN-E210488+ 0.904 551 1.000 C PGS_C08HBa0235H18.1-_SGN-E210488+ (12116 11566) Alignment (genomic DNA sequence = upper lines): ACATGGCCTA CTTGAGATCT TCTTTTGTTT TCTTCCTTCT TGCTTTTGTG ACTTACACTT 12057 |||||| ||| ||||| |||| ||||||||| ||||| | || | || |||| ||||| |||| ACATGGGCTA CTTGACATCT TCTTTTGTTC TCTTCTTCCT TCTTTGTGTG ACTTATACTT 60 ATGCTGCCAC TTTCGAGGTA CGCAACAACT GTCCATACAC CGTCTGGGCG GCGTCGACCC 11997 |||||||||| | | |||||| |||||||||| |||||||||| ||| |||||| || ||||| | ATGCTGCCAC TATTGAGGTA CGCAACAACT GTCCATACAC CGTTTGGGCG GCATCGACTC 120 CAATAGGCGG TGGTCGACGT CTTGATCGAG GCCAAACATG GGTCATCAAT GCACCGAGGG 11937 | |||||||| |||||||||| || |||||| |||||||||| |||||||||| || ||||||| CGATAGGCGG TGGTCGACGT CTCAATCGAG GCCAAACATG GGTCATCAAT GCTCCGAGGG 180 GCACTAAGAT GGCACGTATA TGGGGTCGTA CGAATTGCAA CTTTGATGGT GCTGGTAGAG 11877 | |||||||| |||||||||| |||||||||| | |||||| |||| ||| | || || |||| GAACTAAGAT GGCACGTATA TGGGGTCGTA CTGGTTGCAA CTTTAATGCT GCAGGCAGAG 240 GTTCATGTCA GACTGGTGAT TGTGGTGGGG TCTTGCAATG TACCGGGTGG GGCAAACCAC 11817 || ||||||| |||||||||| |||||||| | |||| || || |||||| ||| |||||||| | GTACATGTCA GACTGGTGAT TGTGGTGGAG TCTTACAGTG TACCGGATGG GGCAAACCCC 300 CAAACACCCT GGCCGAGTAC GCCTTGGACC AGTTTAGCAA CCTAGATTTC TGGGACATTT 11757 |||||||||| ||||||||| |||||||||| |||||||||| | ||||||| |||||||||| CAAACACCCT AGCCGAGTAC GCCTTGGACC AGTTTAGCAA CTTAGATTTT TGGGACATTT 360 CTTTAGTCGA TGGATTTAAT ATTCCAATGA CTTTCGCCCC GACCAATCCT AGTGGAGGGA 11697 |||||||||| |||||||||| |||||||||| |||| ||||| || || ||| |||||||| | CTTTAGTCGA TGGATTTAAT ATTCCAATGA CTTTTGCCCC AACAAAACCT AGTGGAGGAA 420 AATGCCATGC AATTCATTGT ACGGCTAATA TAAATGGTGA ATGTCCTGGT TCACTTAGGG 11637 |||| || || ||||||||| ||||| |||| |||||||||| ||||||| | | |||| || AATGTCACGC AATTCATTGC ACGGCCAATA TAAATGGTGA ATGTCCTCGC GCCCTTAAGG 480 TACCCGGAGG ATGTAACAAT CCTTGTACCA CGTTCGGAGG ACAACAATAT TGTTGCACAC 11577 |||| ||||| ||||||||| |||||||||| |||| ||||| |||||||||| |||||||| | TACCTGGAGG ATGTAACAAC CCTTGTACCA CGTTTGGAGG ACAACAATAT TGTTGCACCC 540 AAGGTCCATG T 11566 |||||||||| | AAGGTCCATG T 551 hqPGS_C08HBa0235H18.1-_SGN-E210488+ (12116 11566) ******************************************************************************** EST sequence 932 +strand 538 n (File: SGN-E206152+) 1 GACATCTTCT TTTGTTCTCT TCTTCCTTCT TTGTGTGACT TATACTTATG CTGCCACTAT 61 TGAGGTACGC AACAACTGTC CATACACCGT TTGGGCGGCA TCGACTCCGA TAGGCGGTGG 121 TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 181 ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 241 TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 301 CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 361 ATTTAATATT CCAATGACTT TTGCCCCAAC AAAACCTAGT GGAGGAAAAT GTCACGCAAT 421 TCATTGCACG GCCAATATAA ATGGTGAATG TCCTCGCGCC CTTAAGGTAC CTGGAGGATG 481 TAACAACCCT TGTACCACGT TTGGAGGACA ACAATATTGT TGCACCCAAG GTCCATGT Predicted gene structure (within gDNA segment 13684 to 9543): Exon 1 12103 11566 ( 538 n); cDNA 1 538 ( 538 n); score: 0.903 MATCH C08HBa0235H18.1- SGN-E206152+ 0.903 538 1.000 C PGS_C08HBa0235H18.1-_SGN-E206152+ (12103 11566) Alignment (genomic DNA sequence = upper lines): GAGATCTTCT TTTGTTTTCT TCCTTCTTGC TTTTGTGACT TACACTTATG CTGCCACTTT 12044 || ||||||| |||||| ||| || | ||| || ||||||| || ||||||| |||||||| | GACATCTTCT TTTGTTCTCT TCTTCCTTCT TTGTGTGACT TATACTTATG CTGCCACTAT 60 CGAGGTACGC AACAACTGTC CATACACCGT CTGGGCGGCG TCGACCCCAA TAGGCGGTGG 11984 ||||||||| |||||||||| |||||||||| |||||||| ||||| || | |||||||||| TGAGGTACGC AACAACTGTC CATACACCGT TTGGGCGGCA TCGACTCCGA TAGGCGGTGG 120 TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA CCGAGGGGCA CTAAGATGGC 11924 ||||||||| ||||||||| |||||||||| ||||||||| |||||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 180 ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT GGTAGAGGTT CATGTCAGAC 11864 |||||||||| |||||||| ||||||||| | ||| ||| || |||||| |||||||||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 240 TGGTGATTGT GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA ACACCCTGGC 11804 |||||||||| ||||| |||| | || ||||| ||| |||||| ||||| |||| ||||||| || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 300 CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 11744 |||||||||| |||||||||| |||||||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 360 ATTTAATATT CCAATGACTT TCGCCCCGAC CAATCCTAGT GGAGGGAAAT GCCATGCAAT 11684 |||||||||| |||||||||| | ||||| || || |||||| ||||| |||| | || ||||| ATTTAATATT CCAATGACTT TTGCCCCAAC AAAACCTAGT GGAGGAAAAT GTCACGCAAT 420 TCATTGTACG GCTAATATAA ATGGTGAATG TCCTGGTTCA CTTAGGGTAC CCGGAGGATG 11624 |||||| ||| || ||||||| |||||||||| |||| | | |||| ||||| | |||||||| TCATTGCACG GCCAATATAA ATGGTGAATG TCCTCGCGCC CTTAAGGTAC CTGGAGGATG 480 TAACAATCCT TGTACCACGT TCGGAGGACA ACAATATTGT TGCACACAAG GTCCATGT 11566 |||||| ||| |||||||||| | |||||||| |||||||||| ||||| |||| |||||||| TAACAACCCT TGTACCACGT TTGGAGGACA ACAATATTGT TGCACCCAAG GTCCATGT 538 hqPGS_C08HBa0235H18.1-_SGN-E206152+ (12103 11566) ******************************************************************************** EST sequence 1116 +strand 534 n (File: SGN-E288509+) 1 TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC TTATGCTGCC 61 ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC TCCGATAGGC 121 GGTGGTCGAC GTCTCAGTCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG 181 ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT 241 CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC 301 CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC 361 GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG AAAATGTCAC 421 GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCCTAA GGTACCTGGA 481 GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC CCAA Predicted gene structure (within gDNA segment 13734 to 9633): Exon 1 12108 11575 ( 534 n); cDNA 1 534 ( 534 n); score: 0.899 MATCH C08HBa0235H18.1- SGN-E288509+ 0.899 534 1.000 C PGS_C08HBa0235H18.1-_SGN-E288509+ (12108 11575) Alignment (genomic DNA sequence = upper lines): TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG TGACTTACAC TTATGCTGCC 12049 ||||||| || |||||||||| | ||||| | ||| || || ||||||| || |||||||||| TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC TTATGCTGCC 60 ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG CGGCGTCGAC CCCAATAGGC 11989 ||| | |||| |||||||||| |||||||||| ||||| |||| |||| ||||| || |||||| ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC TCCGATAGGC 120 GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG GGGCACTAAG 11929 |||||||||| |||| ||| |||||||||| |||||||||| |||| ||||| ||| |||||| GGTGGTCGAC GTCTCAGTCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG 180 ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG AGGTTCATGT 11869 |||||||||| |||||||||| ||| |||| |||||| ||| ||| || || |||| ||||| ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT 240 CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC ACCAAACACC 11809 |||||||||| |||||||||| ||||| || |||||||| | |||||||||| ||||||||| CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC 300 CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT TTCTTTAGTC 11749 || ||||||| |||||||||| |||||||||| ||| |||||| | |||||||| |||||||||| CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC 360 GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG GAAATGCCAT 11689 |||||||||| |||||||||| |||||| ||| || || || | |||||||||| ||||| || GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG AAAATGTCAC 420 GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG GGTACCCGGA 11629 |||||||||| | ||||| || |||||||||| ||||||||| | | | || |||||| ||| GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCCTAA GGTACCTGGA 480 GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT ATTGTTGCAC ACAA 11575 |||||||||| | |||||||| |||||| ||| |||||||||| |||||||||| ||| GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC CCAA 534 hqPGS_C08HBa0235H18.1-_SGN-E288509+ (12108 11575) ******************************************************************************** EST sequence 927 +strand 535 n (File: SGN-E275948+) 1 GCTACTTGAC ATCTTCTTTT GTTCTCTTCT TCCTTCTTTG AGTGACTTAT ACTTATGCTG 61 CCACTATTGA GGTACGCAAC AACTGTCCAT ACACCGTTTG GGCGGCATCG ACTCCGATAG 121 GCGGTGGTCG ACGTCTCAAT CGAGGCCAAA CATGGGTCAT CAATGCTCCG AGGGGAACTA 181 AGATGGCACG TATATGGGGT CGTACTGGTT GCAACTTTAA TGCTGCAGGC AGAGGTACAT 241 GTCAGACTGG TGATTGTGGT GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAACA 301 CCCTAGCCGA GTACGCCTTG GACCAGTTTA GCAACTTAGA TTTTTGGGAC ATTTCTTTAG 361 TCGATGGATT TAATATTCCA ATGACTTTTG CCCCAACAAA ACCTAGTGGA GGAAAATGTC 421 ACGCAATTCA TTGCACGGCC AATATAAATG GTGAATGTCC TCGCGCCCTT AAGGTACCTG 481 GAGGATGTAA CAACCCTTGT ACCACGTTTG GAGGACAACA ATATTGTTGC ACCCA Predicted gene structure (within gDNA segment 13754 to 9643): Exon 1 12109 11576 ( 534 n); cDNA 2 535 ( 534 n); score: 0.901 MATCH C08HBa0235H18.1- SGN-E275948+ 0.901 534 0.998 C PGS_C08HBa0235H18.1-_SGN-E275948+ (12109 11576) Alignment (genomic DNA sequence = upper lines): CTACTTGAGA TCTTCTTTTG TTTTCTTCCT TCTTGCTTTT GTGACTTACA CTTATGCTGC 12050 |||||||| | |||||||||| || ||||| | ||| || |||||||| | |||||||||| CTACTTGACA TCTTCTTTTG TTCTCTTCTT CCTTCTTTGA GTGACTTATA CTTATGCTGC 61 CACTTTCGAG GTACGCAACA ACTGTCCATA CACCGTCTGG GCGGCGTCGA CCCCAATAGG 11990 |||| | ||| |||||||||| |||||||||| |||||| ||| ||||| |||| | || ||||| CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA CTCCGATAGG 121 CGGTGGTCGA CGTCTTGATC GAGGCCAAAC ATGGGTCATC AATGCACCGA GGGGCACTAA 11930 |||||||||| ||||| ||| |||||||||| |||||||||| ||||| |||| |||| ||||| CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA GGGGAACTAA 181 GATGGCACGT ATATGGGGTC GTACGAATTG CAACTTTGAT GGTGCTGGTA GAGGTTCATG 11870 |||||||||| |||||||||| |||| ||| ||||||| || | ||| || | ||||| |||| GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA GAGGTACATG 241 TCAGACTGGT GATTGTGGTG GGGTCTTGCA ATGTACCGGG TGGGGCAAAC CACCAAACAC 11810 |||||||||| |||||||||| | ||||| || |||||||| |||||||||| | |||||||| TCAGACTGGT GATTGTGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC CCCCAAACAC 301 CCTGGCCGAG TACGCCTTGG ACCAGTTTAG CAACCTAGAT TTCTGGGACA TTTCTTTAGT 11750 ||| |||||| |||||||||| |||||||||| |||| ||||| || ||||||| |||||||||| CCTAGCCGAG TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA TTTCTTTAGT 361 CGATGGATTT AATATTCCAA TGACTTTCGC CCCGACCAAT CCTAGTGGAG GGAAATGCCA 11690 |||||||||| |||||||||| ||||||| || ||| || || |||||||||| | ||||| || CGATGGATTT AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG GAAAATGTCA 421 TGCAATTCAT TGTACGGCTA ATATAAATGG TGAATGTCCT GGTTCACTTA GGGTACCCGG 11630 ||||||||| || ||||| | |||||||||| |||||||||| | | |||| |||||| || CGCAATTCAT TGCACGGCCA ATATAAATGG TGAATGTCCT CGCGCCCTTA AGGTACCTGG 481 AGGATGTAAC AATCCTTGTA CCACGTTCGG AGGACAACAA TATTGTTGCA CACA 11576 |||||||||| || ||||||| ||||||| || |||||||||| |||||||||| | || AGGATGTAAC AACCCTTGTA CCACGTTTGG AGGACAACAA TATTGTTGCA CCCA 535 hqPGS_C08HBa0235H18.1-_SGN-E275948+ (12109 11576) ******************************************************************************** EST sequence 777 +strand 455 n (File: SGN-E253792+) 1 AACTGTCCAT ACACCGTTTG GGCGGCATCG ACTCCGATAG GCGGTGGTCG ACGTCTCAAT 61 CGAGGCCAAA CATGGGTCAT CAATGCTCCG AGGGGAACTA AGATGGCACG TATATGGGGT 121 CGTACTGGTT GCAACTTTAA TGCTGCAGGC AGAGGTACAT GTCAGACTGG TGATTGTGGT 181 GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAACA CCCTAGCCGA GTACGCCTTG 241 GACCAGTTTA GCAACTTAGA TTTTTGGGAC ATTTCTTTAG TCGATGGATT TAATATTCCA 301 ATGACTTTTG CCCCAACAAA ACCTAGTGGA GGAAAATGTC ACGCAATTCA TTGCACGGCC 361 AATATAAATG GTGAATGTCC TCGCGCCCTT AAGGTACCTG GAGGATGTAA CAACCCTTGT 421 ACCACGTTTG GAGGACAACA ATATTGTTGC ACCCA Predicted gene structure (within gDNA segment 12954 to 9643): Exon 1 12030 11576 ( 455 n); cDNA 1 455 ( 455 n); score: 0.908 MATCH C08HBa0235H18.1- SGN-E253792+ 0.908 455 1.000 C PGS_C08HBa0235H18.1-_SGN-E253792+ (12030 11576) Alignment (genomic DNA sequence = upper lines): AACTGTCCAT ACACCGTCTG GGCGGCGTCG ACCCCAATAG GCGGTGGTCG ACGTCTTGAT 11971 |||||||||| ||||||| || |||||| ||| || || |||| |||||||||| |||||| || AACTGTCCAT ACACCGTTTG GGCGGCATCG ACTCCGATAG GCGGTGGTCG ACGTCTCAAT 60 CGAGGCCAAA CATGGGTCAT CAATGCACCG AGGGGCACTA AGATGGCACG TATATGGGGT 11911 |||||||||| |||||||||| |||||| ||| ||||| |||| |||||||||| |||||||||| CGAGGCCAAA CATGGGTCAT CAATGCTCCG AGGGGAACTA AGATGGCACG TATATGGGGT 120 CGTACGAATT GCAACTTTGA TGGTGCTGGT AGAGGTTCAT GTCAGACTGG TGATTGTGGT 11851 ||||| || |||||||| | || ||| || |||||| ||| |||||||||| |||||||||| CGTACTGGTT GCAACTTTAA TGCTGCAGGC AGAGGTACAT GTCAGACTGG TGATTGTGGT 180 GGGGTCTTGC AATGTACCGG GTGGGGCAAA CCACCAAACA CCCTGGCCGA GTACGCCTTG 11791 || ||||| | | |||||||| ||||||||| || ||||||| |||| ||||| |||||||||| GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAACA CCCTAGCCGA GTACGCCTTG 240 GACCAGTTTA GCAACCTAGA TTTCTGGGAC ATTTCTTTAG TCGATGGATT TAATATTCCA 11731 |||||||||| ||||| |||| ||| |||||| |||||||||| |||||||||| |||||||||| GACCAGTTTA GCAACTTAGA TTTTTGGGAC ATTTCTTTAG TCGATGGATT TAATATTCCA 300 ATGACTTTCG CCCCGACCAA TCCTAGTGGA GGGAAATGCC ATGCAATTCA TTGTACGGCT 11671 |||||||| | |||| || || ||||||||| || ||||| | | |||||||| ||| ||||| ATGACTTTTG CCCCAACAAA ACCTAGTGGA GGAAAATGTC ACGCAATTCA TTGCACGGCC 360 AATATAAATG GTGAATGTCC TGGTTCACTT AGGGTACCCG GAGGATGTAA CAATCCTTGT 11611 |||||||||| |||||||||| | | | ||| | |||||| | |||||||||| ||| |||||| AATATAAATG GTGAATGTCC TCGCGCCCTT AAGGTACCTG GAGGATGTAA CAACCCTTGT 420 ACCACGTTCG GAGGACAACA ATATTGTTGC ACACA 11576 |||||||| | |||||||||| |||||||||| || || ACCACGTTTG GAGGACAACA ATATTGTTGC ACCCA 455 hqPGS_C08HBa0235H18.1-_SGN-E253792+ (12030 11576) ******************************************************************************** EST sequence 760 +strand 473 n (File: SGN-E334899+) 1 CCACTTTCGA GGTACGCAAC AACTGTCCAT ACACCGTCTG GGCGGCGTCG ACCCCAATAG 61 GCGGTGGTCG ACGTCTTGAT CGAGGCCAAA CATGGGTCAT CAATGCACCG AGGGGCACTA 121 AGATGGCACG TATATGGGGT CGTACGAATT GCAACTTTGA TGGTGCTGGT AGAGGTTCAT 181 GTCAGACTGG TGATTGTGGT GGGGTCTTGC AATGTACCGG GTGGGGCAAA CCACCAAACA 241 CCCTGGCCGA GTACGCCTTG GACCAGTTTA GCAACCTAGA TTTCTGGGAC ATTTCTTTAG 301 TCGATGGATT TAATATTCCA ATGACTTTCG CCCCGACCAA TCCTAGTGGA GGGAAATGCC 361 ATGCAATTCA TTGTACGGCT AATATAAATG GTGAATGTCC TGGTTCACTT AGGGTGCCCG 421 GAGGATGTAA CAATCCTTGT ACCACGTTCG GAGGACAACA ATATTGTTGC ACA Predicted gene structure (within gDNA segment 12650 to 10968): Exon 1 12050 11578 ( 473 n); cDNA 1 473 ( 473 n); score: 0.998 MATCH C08HBa0235H18.1- SGN-E334899+ 0.998 473 1.000 C PGS_C08HBa0235H18.1-_SGN-E334899+ (12050 11578) Alignment (genomic DNA sequence = upper lines): CCACTTTCGA GGTACGCAAC AACTGTCCAT ACACCGTCTG GGCGGCGTCG ACCCCAATAG 11991 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCACTTTCGA GGTACGCAAC AACTGTCCAT ACACCGTCTG GGCGGCGTCG ACCCCAATAG 60 GCGGTGGTCG ACGTCTTGAT CGAGGCCAAA CATGGGTCAT CAATGCACCG AGGGGCACTA 11931 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGGTGGTCG ACGTCTTGAT CGAGGCCAAA CATGGGTCAT CAATGCACCG AGGGGCACTA 120 AGATGGCACG TATATGGGGT CGTACGAATT GCAACTTTGA TGGTGCTGGT AGAGGTTCAT 11871 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATGGCACG TATATGGGGT CGTACGAATT GCAACTTTGA TGGTGCTGGT AGAGGTTCAT 180 GTCAGACTGG TGATTGTGGT GGGGTCTTGC AATGTACCGG GTGGGGCAAA CCACCAAACA 11811 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCAGACTGG TGATTGTGGT GGGGTCTTGC AATGTACCGG GTGGGGCAAA CCACCAAACA 240 CCCTGGCCGA GTACGCCTTG GACCAGTTTA GCAACCTAGA TTTCTGGGAC ATTTCTTTAG 11751 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCTGGCCGA GTACGCCTTG GACCAGTTTA GCAACCTAGA TTTCTGGGAC ATTTCTTTAG 300 TCGATGGATT TAATATTCCA ATGACTTTCG CCCCGACCAA TCCTAGTGGA GGGAAATGCC 11691 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGATGGATT TAATATTCCA ATGACTTTCG CCCCGACCAA TCCTAGTGGA GGGAAATGCC 360 ATGCAATTCA TTGTACGGCT AATATAAATG GTGAATGTCC TGGTTCACTT AGGGTACCCG 11631 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| ATGCAATTCA TTGTACGGCT AATATAAATG GTGAATGTCC TGGTTCACTT AGGGTGCCCG 420 GAGGATGTAA CAATCCTTGT ACCACGTTCG GAGGACAACA ATATTGTTGC ACA 11578 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| GAGGATGTAA CAATCCTTGT ACCACGTTCG GAGGACAACA ATATTGTTGC ACA 473 hqPGS_C08HBa0235H18.1-_SGN-E334899+ (12050 11578) ******************************************************************************** EST sequence 768 +strand 542 n (File: SGN-E215146+) 1 CAAACATGGG CTACTTGACA TCTTCTTTTG TTCTCTTCTT CCTTCTTTGT GTGACTTATA 61 CTTATGCTGC CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA 121 CTCCGATAGG CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA 181 GGGGAACTAA GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA 241 GAGGTACATG TCAGACTGGT GATTGTGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC 301 CCCCAAACAC CCTAGCCGAG TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA 361 TTTCTTTAGT CGATGGATTT AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG 421 GAAAATGTCA CGCAATTCAT TGCACGGCCA ATATAAATGG TGAATGTCCT CGCGCCCTTA 481 AGGTACCTGG AGGATGTAAC AACCCTTGTA CCACGTTTGG AGGACAACAA TATTGTTGCA 541 CC Predicted gene structure (within gDNA segment 13844 to 9663): Exon 1 12119 11579 ( 541 n); cDNA 1 541 ( 541 n); score: 0.904 MATCH C08HBa0235H18.1- SGN-E215146+ 0.904 541 0.998 C PGS_C08HBa0235H18.1-_SGN-E215146+ (12119 11579) Alignment (genomic DNA sequence = upper lines): CAAACATGGC CTACTTGAGA TCTTCTTTTG TTTTCTTCCT TCTTGCTTTT GTGACTTACA 12060 ||||||||| |||||||| | |||||||||| || ||||| | ||| || | |||||||| | CAAACATGGG CTACTTGACA TCTTCTTTTG TTCTCTTCTT CCTTCTTTGT GTGACTTATA 60 CTTATGCTGC CACTTTCGAG GTACGCAACA ACTGTCCATA CACCGTCTGG GCGGCGTCGA 12000 |||||||||| |||| | ||| |||||||||| |||||||||| |||||| ||| ||||| |||| CTTATGCTGC CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA 120 CCCCAATAGG CGGTGGTCGA CGTCTTGATC GAGGCCAAAC ATGGGTCATC AATGCACCGA 11940 | || ||||| |||||||||| ||||| ||| |||||||||| |||||||||| ||||| |||| CTCCGATAGG CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA 180 GGGGCACTAA GATGGCACGT ATATGGGGTC GTACGAATTG CAACTTTGAT GGTGCTGGTA 11880 |||| ||||| |||||||||| |||||||||| |||| ||| ||||||| || | ||| || | GGGGAACTAA GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA 240 GAGGTTCATG TCAGACTGGT GATTGTGGTG GGGTCTTGCA ATGTACCGGG TGGGGCAAAC 11820 ||||| |||| |||||||||| |||||||||| | ||||| || |||||||| |||||||||| GAGGTACATG TCAGACTGGT GATTGTGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC 300 CACCAAACAC CCTGGCCGAG TACGCCTTGG ACCAGTTTAG CAACCTAGAT TTCTGGGACA 11760 | |||||||| ||| |||||| |||||||||| |||||||||| |||| ||||| || ||||||| CCCCAAACAC CCTAGCCGAG TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA 360 TTTCTTTAGT CGATGGATTT AATATTCCAA TGACTTTCGC CCCGACCAAT CCTAGTGGAG 11700 |||||||||| |||||||||| |||||||||| ||||||| || ||| || || |||||||||| TTTCTTTAGT CGATGGATTT AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG 420 GGAAATGCCA TGCAATTCAT TGTACGGCTA ATATAAATGG TGAATGTCCT GGTTCACTTA 11640 | ||||| || ||||||||| || ||||| | |||||||||| |||||||||| | | |||| GAAAATGTCA CGCAATTCAT TGCACGGCCA ATATAAATGG TGAATGTCCT CGCGCCCTTA 480 GGGTACCCGG AGGATGTAAC AATCCTTGTA CCACGTTCGG AGGACAACAA TATTGTTGCA 11580 |||||| || |||||||||| || ||||||| ||||||| || |||||||||| |||||||||| AGGTACCTGG AGGATGTAAC AACCCTTGTA CCACGTTTGG AGGACAACAA TATTGTTGCA 540 C 11579 | C 541 hqPGS_C08HBa0235H18.1-_SGN-E215146+ (12119 11579) ******************************************************************************** EST sequence 1003 +strand 531 n (File: SGN-E206874+) 1 TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC TTATGCTGCC 61 ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC TCCGATAGGC 121 GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG 181 ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTATAATG CTGCAGGCAG AGGTACATGT 241 CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC 301 CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC 361 GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG AAAATGTCAC 421 GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA GGTACCTGGA 481 GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC C Predicted gene structure (within gDNA segment 13734 to 9663): Exon 1 12108 11579 ( 530 n); cDNA 1 530 ( 530 n); score: 0.902 MATCH C08HBa0235H18.1- SGN-E206874+ 0.902 530 0.998 C PGS_C08HBa0235H18.1-_SGN-E206874+ (12108 11579) Alignment (genomic DNA sequence = upper lines): TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG TGACTTACAC TTATGCTGCC 12049 ||||||| || |||||||||| | ||||| | ||| || || ||||||| || |||||||||| TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC TTATGCTGCC 60 ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG CGGCGTCGAC CCCAATAGGC 11989 ||| | |||| |||||||||| |||||||||| ||||| |||| |||| ||||| || |||||| ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC TCCGATAGGC 120 GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG GGGCACTAAG 11929 |||||||||| |||| |||| |||||||||| |||||||||| |||| ||||| ||| |||||| GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG 180 ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG AGGTTCATGT 11869 |||||||||| |||||||||| ||| |||| |||| | ||| ||| || || |||| ||||| ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTATAATG CTGCAGGCAG AGGTACATGT 240 CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC ACCAAACACC 11809 |||||||||| |||||||||| ||||| || |||||||| | |||||||||| ||||||||| CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC 300 CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT TTCTTTAGTC 11749 || ||||||| |||||||||| |||||||||| ||| |||||| | |||||||| |||||||||| CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC 360 GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG GAAATGCCAT 11689 |||||||||| |||||||||| |||||| ||| || || || | |||||||||| ||||| || GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG AAAATGTCAC 420 GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG GGTACCCGGA 11629 |||||||||| | ||||| || |||||||||| ||||||||| | | |||| |||||| ||| GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA GGTACCTGGA 480 GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT ATTGTTGCAC 11579 |||||||||| | |||||||| |||||| ||| |||||||||| |||||||||| GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC 530 hqPGS_C08HBa0235H18.1-_SGN-E206874+ (12108 11579) ******************************************************************************** EST sequence 1170 +strand 525 n (File: SGN-E208900+) 1 CATCTTCTTT TGTTCTCTTC TTCCTTCTTT GTGTGACTTA TACTTATGCT GCCACTATTG 61 AGGTACGCAA CAACTGTCCA TACACCGTTT GGGCGGCATC GACTCCGATA GGCGGTGGTC 121 GACGTCTCAA TCGAGGCCAA ACATGGGTCA TCAATGCTCC GAGGGGAACT AAGATGGCAC 181 GTATATGGGG TCGTACTGGT TGCAACTTTA ATGCTGCAGG CAGAGGTACA TGTCAGACTG 241 GTGATTGTGG TGGAGTCTTA CAGTGTACCG GATGGGGCAA ACCCCCAAAC ACCCTAGCCG 301 AGTACGCCTT GGACCAGTTT AGCAACTTAG ATTTTTGGGA CATTTCTTTA GTCGATGGAT 361 TTAATATTCC AATGACTTTT GCCCCAACAA AACCTAGTGG AGGAAAATGT CACGCAATTC 421 ATTGCACGGC CAATATAAAT GGTGAATGTC CTCGCGCCCT TAAGGTACCT GGAGGATGTA 481 ACAACCCTTG TACCACGTTT GGAGGACAAC AATATTGTTG CACCC Predicted gene structure (within gDNA segment 13664 to 9653): Exon 1 12100 11579 ( 522 n); cDNA 2 523 ( 522 n); score: 0.904 MATCH C08HBa0235H18.1- SGN-E208900+ 0.904 522 0.994 C PGS_C08HBa0235H18.1-_SGN-E208900+ (12100 11579) Alignment (genomic DNA sequence = upper lines): ATCTTCTTTT GTTTTCTTCC TTCTTGCTTT TGTGACTTAC ACTTATGCTG CCACTTTCGA 12041 |||||||||| ||| ||||| | ||| || ||||||||| |||||||||| ||||| | || ATCTTCTTTT GTTCTCTTCT TCCTTCTTTG TGTGACTTAT ACTTATGCTG CCACTATTGA 61 GGTACGCAAC AACTGTCCAT ACACCGTCTG GGCGGCGTCG ACCCCAATAG GCGGTGGTCG 11981 |||||||||| |||||||||| ||||||| || |||||| ||| || || |||| |||||||||| GGTACGCAAC AACTGTCCAT ACACCGTTTG GGCGGCATCG ACTCCGATAG GCGGTGGTCG 121 ACGTCTTGAT CGAGGCCAAA CATGGGTCAT CAATGCACCG AGGGGCACTA AGATGGCACG 11921 |||||| || |||||||||| |||||||||| |||||| ||| ||||| |||| |||||||||| ACGTCTCAAT CGAGGCCAAA CATGGGTCAT CAATGCTCCG AGGGGAACTA AGATGGCACG 181 TATATGGGGT CGTACGAATT GCAACTTTGA TGGTGCTGGT AGAGGTTCAT GTCAGACTGG 11861 |||||||||| ||||| || |||||||| | || ||| || |||||| ||| |||||||||| TATATGGGGT CGTACTGGTT GCAACTTTAA TGCTGCAGGC AGAGGTACAT GTCAGACTGG 241 TGATTGTGGT GGGGTCTTGC AATGTACCGG GTGGGGCAAA CCACCAAACA CCCTGGCCGA 11801 |||||||||| || ||||| | | |||||||| ||||||||| || ||||||| |||| ||||| TGATTGTGGT GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAACA CCCTAGCCGA 301 GTACGCCTTG GACCAGTTTA GCAACCTAGA TTTCTGGGAC ATTTCTTTAG TCGATGGATT 11741 |||||||||| |||||||||| ||||| |||| ||| |||||| |||||||||| |||||||||| GTACGCCTTG GACCAGTTTA GCAACTTAGA TTTTTGGGAC ATTTCTTTAG TCGATGGATT 361 TAATATTCCA ATGACTTTCG CCCCGACCAA TCCTAGTGGA GGGAAATGCC ATGCAATTCA 11681 |||||||||| |||||||| | |||| || || ||||||||| || ||||| | | |||||||| TAATATTCCA ATGACTTTTG CCCCAACAAA ACCTAGTGGA GGAAAATGTC ACGCAATTCA 421 TTGTACGGCT AATATAAATG GTGAATGTCC TGGTTCACTT AGGGTACCCG GAGGATGTAA 11621 ||| ||||| |||||||||| |||||||||| | | | ||| | |||||| | |||||||||| TTGCACGGCC AATATAAATG GTGAATGTCC TCGCGCCCTT AAGGTACCTG GAGGATGTAA 481 CAATCCTTGT ACCACGTTCG GAGGACAACA ATATTGTTGC AC 11579 ||| |||||| |||||||| | |||||||||| |||||||||| || CAACCCTTGT ACCACGTTTG GAGGACAACA ATATTGTTGC AC 523 hqPGS_C08HBa0235H18.1-_SGN-E208900+ (12100 11579) ******************************************************************************** EST sequence 896 +strand 499 n (File: SGN-E335641+) 1 TTCTTTGTGT GACTTATACT TATGCTGCCA CTATTGAGGT ACGCAACAAC TGTCCATACA 61 CCGTTTGGGC GGCATCGACT CCGATAGGCG GTGGTCGACG TCTCAATCGA GGCCAAACAT 121 GGGTCATCAA TGCTCCGAGG GGAACTAAGA TGGCACGTAT ATGGGGTCGT ACTGGTTGCA 181 ACTTTAATGC TGCAGGCAGA GGTACATGTC AGACTGGTGA TTGTGGTGGA GTCTTACAGT 241 GTACCGGATG GGGCAAACCC CCAAACACCC TAGCCGAGTA CGCCTTGGAC CAGTTTAGCA 301 ACTTAGATTT TTGGGACATT TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTTGCCC 361 CAACAAAACC TAGTGGAGGA AAATGTCACG CAATTCATTG CACGGCCAAT ATAAATGGTG 421 AATGTCCTCG CGCCCTTAAG GTACCTGGAG GATGTAACAA CCCTTGTACC ACGTTTGGAG 481 GACAACAATA TTGTTGCAC Predicted gene structure (within gDNA segment 13424 to 9673): Exon 1 12077 11579 ( 499 n); cDNA 1 499 ( 499 n); score: 0.906 MATCH C08HBa0235H18.1- SGN-E335641+ 0.906 499 1.000 C PGS_C08HBa0235H18.1-_SGN-E335641+ (12077 11579) Alignment (genomic DNA sequence = upper lines): TTGCTTTTGT GACTTACACT TATGCTGCCA CTTTCGAGGT ACGCAACAAC TGTCCATACA 12018 || || ||| |||||| ||| |||||||||| || | ||||| |||||||||| |||||||||| TTCTTTGTGT GACTTATACT TATGCTGCCA CTATTGAGGT ACGCAACAAC TGTCCATACA 60 CCGTCTGGGC GGCGTCGACC CCAATAGGCG GTGGTCGACG TCTTGATCGA GGCCAAACAT 11958 |||| ||||| ||| ||||| || ||||||| |||||||||| ||| ||||| |||||||||| CCGTTTGGGC GGCATCGACT CCGATAGGCG GTGGTCGACG TCTCAATCGA GGCCAAACAT 120 GGGTCATCAA TGCACCGAGG GGCACTAAGA TGGCACGTAT ATGGGGTCGT ACGAATTGCA 11898 |||||||||| ||| |||||| || ||||||| |||||||||| |||||||||| || ||||| GGGTCATCAA TGCTCCGAGG GGAACTAAGA TGGCACGTAT ATGGGGTCGT ACTGGTTGCA 180 ACTTTGATGG TGCTGGTAGA GGTTCATGTC AGACTGGTGA TTGTGGTGGG GTCTTGCAAT 11838 ||||| ||| ||| || ||| ||| |||||| |||||||||| ||||||||| ||||| || | ACTTTAATGC TGCAGGCAGA GGTACATGTC AGACTGGTGA TTGTGGTGGA GTCTTACAGT 240 GTACCGGGTG GGGCAAACCA CCAAACACCC TGGCCGAGTA CGCCTTGGAC CAGTTTAGCA 11778 ||||||| || ||||||||| |||||||||| | |||||||| |||||||||| |||||||||| GTACCGGATG GGGCAAACCC CCAAACACCC TAGCCGAGTA CGCCTTGGAC CAGTTTAGCA 300 ACCTAGATTT CTGGGACATT TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTCGCCC 11718 || ||||||| ||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| ACTTAGATTT TTGGGACATT TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTTGCCC 360 CGACCAATCC TAGTGGAGGG AAATGCCATG CAATTCATTG TACGGCTAAT ATAAATGGTG 11658 | || || || ||||||||| ||||| || | |||||||||| ||||| ||| |||||||||| CAACAAAACC TAGTGGAGGA AAATGTCACG CAATTCATTG CACGGCCAAT ATAAATGGTG 420 AATGTCCTGG TTCACTTAGG GTACCCGGAG GATGTAACAA TCCTTGTACC ACGTTCGGAG 11598 |||||||| | | |||| | ||||| |||| |||||||||| ||||||||| ||||| |||| AATGTCCTCG CGCCCTTAAG GTACCTGGAG GATGTAACAA CCCTTGTACC ACGTTTGGAG 480 GACAACAATA TTGTTGCAC 11579 |||||||||| ||||||||| GACAACAATA TTGTTGCAC 499 hqPGS_C08HBa0235H18.1-_SGN-E335641+ (12077 11579) ******************************************************************************** EST sequence 1199 +strand 492 n (File: SGN-E209439+) 1 GTGACTTATA CTTATGCTGC CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG 61 GCGGCATCGA CTCCGATAGG CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC 121 AATGCTCCGA GGGGAACTAA GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT 181 GCTGCAGGCA GAGGTACATG TCAGACTGGT GATTGTGGTG GAGTCTTACA GTGTACCGGA 241 TGGGGCAAAC CCCCAAACAC CCTAGCCGAG TACGCCTTGG ACCAGTTTAG CAACTTAGAT 301 TTTTGGGACA TTTCTTTAGT CGATGGATTT AATATTCCAA TGACTTTTGC CCCAACAAAA 361 CCTAGTGGAG GAAAATGTCA CGCAATTCAT TGCACGGCCA ATATAAATGG TGAATGTCCT 421 CGCGCCCTTA AGGTACCTGG AGGATGTAAC AACCCTTGTA CCACGTTTGG AGGACAACAA 481 TATTGTTGCA CC Predicted gene structure (within gDNA segment 13344 to 9663): Exon 1 12069 11579 ( 491 n); cDNA 1 491 ( 491 n); score: 0.910 MATCH C08HBa0235H18.1- SGN-E209439+ 0.910 491 0.998 C PGS_C08HBa0235H18.1-_SGN-E209439+ (12069 11579) Alignment (genomic DNA sequence = upper lines): GTGACTTACA CTTATGCTGC CACTTTCGAG GTACGCAACA ACTGTCCATA CACCGTCTGG 12010 |||||||| | |||||||||| |||| | ||| |||||||||| |||||||||| |||||| ||| GTGACTTATA CTTATGCTGC CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG 60 GCGGCGTCGA CCCCAATAGG CGGTGGTCGA CGTCTTGATC GAGGCCAAAC ATGGGTCATC 11950 ||||| |||| | || ||||| |||||||||| ||||| ||| |||||||||| |||||||||| GCGGCATCGA CTCCGATAGG CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC 120 AATGCACCGA GGGGCACTAA GATGGCACGT ATATGGGGTC GTACGAATTG CAACTTTGAT 11890 ||||| |||| |||| ||||| |||||||||| |||||||||| |||| ||| ||||||| || AATGCTCCGA GGGGAACTAA GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT 180 GGTGCTGGTA GAGGTTCATG TCAGACTGGT GATTGTGGTG GGGTCTTGCA ATGTACCGGG 11830 | ||| || | ||||| |||| |||||||||| |||||||||| | ||||| || |||||||| GCTGCAGGCA GAGGTACATG TCAGACTGGT GATTGTGGTG GAGTCTTACA GTGTACCGGA 240 TGGGGCAAAC CACCAAACAC CCTGGCCGAG TACGCCTTGG ACCAGTTTAG CAACCTAGAT 11770 |||||||||| | |||||||| ||| |||||| |||||||||| |||||||||| |||| ||||| TGGGGCAAAC CCCCAAACAC CCTAGCCGAG TACGCCTTGG ACCAGTTTAG CAACTTAGAT 300 TTCTGGGACA TTTCTTTAGT CGATGGATTT AATATTCCAA TGACTTTCGC CCCGACCAAT 11710 || ||||||| |||||||||| |||||||||| |||||||||| ||||||| || ||| || || TTTTGGGACA TTTCTTTAGT CGATGGATTT AATATTCCAA TGACTTTTGC CCCAACAAAA 360 CCTAGTGGAG GGAAATGCCA TGCAATTCAT TGTACGGCTA ATATAAATGG TGAATGTCCT 11650 |||||||||| | ||||| || ||||||||| || ||||| | |||||||||| |||||||||| CCTAGTGGAG GAAAATGTCA CGCAATTCAT TGCACGGCCA ATATAAATGG TGAATGTCCT 420 GGTTCACTTA GGGTACCCGG AGGATGTAAC AATCCTTGTA CCACGTTCGG AGGACAACAA 11590 | | |||| |||||| || |||||||||| || ||||||| ||||||| || |||||||||| CGCGCCCTTA AGGTACCTGG AGGATGTAAC AACCCTTGTA CCACGTTTGG AGGACAACAA 480 TATTGTTGCA C 11579 |||||||||| | TATTGTTGCA C 491 hqPGS_C08HBa0235H18.1-_SGN-E209439+ (12069 11579) ******************************************************************************** EST sequence 1156 +strand 481 n (File: SGN-E311822+) 1 TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 61 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 121 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 181 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 241 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 301 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 361 AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 421 GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC 481 C Predicted gene structure (within gDNA segment 13234 to 9663): Exon 1 12058 11579 ( 480 n); cDNA 1 480 ( 480 n); score: 0.910 MATCH C08HBa0235H18.1- SGN-E311822+ 0.910 480 0.998 C PGS_C08HBa0235H18.1-_SGN-E311822+ (12058 11579) Alignment (genomic DNA sequence = upper lines): TTATGCTGCC ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG CGGCGTCGAC 11999 |||||||||| ||| | |||| |||||||||| |||||||||| ||||| |||| |||| ||||| TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 60 CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG 11939 || |||||| |||||||||| |||| |||| |||||||||| |||||||||| |||| ||||| TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 120 GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG 11879 ||| |||||| |||||||||| |||||||||| ||| |||| |||||| ||| ||| || || GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 180 AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC 11819 |||| ||||| |||||||||| |||||||||| ||||| || |||||||| | |||||||||| AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 240 ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT 11759 ||||||||| || ||||||| |||||||||| |||||||||| ||| |||||| | |||||||| CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 300 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG 11699 |||||||||| |||||||||| |||||||||| |||||| ||| || || || | |||||||||| TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 360 GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG 11639 ||||| || |||||||||| | ||||| || |||||||||| ||||||||| | | |||| AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 420 GGTACCCGGA GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT ATTGTTGCAC 11579 |||||| ||| |||||||||| | |||||||| |||||| ||| |||||||||| |||||||||| GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC 480 hqPGS_C08HBa0235H18.1-_SGN-E311822+ (12058 11579) ******************************************************************************** EST sequence 1078 +strand 441 n (File: SGN-E208167+) 1 CCGTATGGGC AGCGGCGACT CCCGTAGGAG GTGGCCGACG TCTCGAGAGA GGTCAAAGTT 61 GGTGGTTTTG GGCTCCACCG GGCACCAAAA TGGCACGTAT TTGGGGTCGT ACTAATTGCA 121 ATTTTGATGG TGCTGGTAGA GGTTGGTGCC AGACCGGTGA TTGTGGTGGA GTCTTGGAAT 181 GCAAAGGATG GGGTAAACCA CCAAACACCT TAGCTGAATA CGCTTTGAAT CAATTTAGCA 241 ACTTAGATTT CTGGGACATT TCTGTTATTG ATGGATTCAA CATCCCTATG TCTTTCGGCC 301 CAACTAACCC TGGGCCGGGA AAATGTCATC CAATTCAATG TGTTGCTAAT ATAAACGGTG 361 AATGCCCTGG TTCACTTAGG GTACCCGGAG GATGTAACAA CCCTTGTACT ACATTCGGAG 421 GACAACAATA TTGTTGCACT C Predicted gene structure (within gDNA segment 15902 to 10949): Exon 1 12017 11579 ( 439 n); cDNA 1 439 ( 439 n); score: 0.815 MATCH C08HBa0235H18.1- SGN-E208167+ 0.815 439 0.995 C PGS_C08HBa0235H18.1-_SGN-E208167+ (12017 11579) Alignment (genomic DNA sequence = upper lines): CCGTCTGGGC GGCGTCGACC CCAATAGGCG GTGGTCGACG TCTTGATCGA GGCCAAACAT 11958 |||| ||||| ||| |||| || |||| | |||| ||||| ||| || || || |||| | CCGTATGGGC AGCGGCGACT CCCGTAGGAG GTGGCCGACG TCTCGAGAGA GGTCAAAGTT 60 GGGTCATCAA TGCACCGAGG GGCACTAAGA TGGCACGTAT ATGGGGTCGT ACGAATTGCA 11898 || | || || | ||||| || | |||||||||| ||||||||| || ||||||| GGTGGTTTTG GGCTCCACCG GGCACCAAAA TGGCACGTAT TTGGGGTCGT ACTAATTGCA 120 ACTTTGATGG TGCTGGTAGA GGTTCATGTC AGACTGGTGA TTGTGGTGGG GTCTTGCAAT 11838 | |||||||| |||||||||| |||| || | |||| ||||| ||||||||| |||||| ||| ATTTTGATGG TGCTGGTAGA GGTTGGTGCC AGACCGGTGA TTGTGGTGGA GTCTTGGAAT 180 GTACCGGGTG GGGCAAACCA CCAAACACCC TGGCCGAGTA CGCCTTGGAC CAGTTTAGCA 11778 | | || || ||| |||||| ||||||||| | || || || ||| ||| | || ||||||| GCAAAGGATG GGGTAAACCA CCAAACACCT TAGCTGAATA CGCTTTGAAT CAATTTAGCA 240 ACCTAGATTT CTGGGACATT TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTCGCCC 11718 || ||||||| |||||||||| ||| | | | ||||||| || || || ||| |||||| || ACTTAGATTT CTGGGACATT TCTGTTATTG ATGGATTCAA CATCCCTATG TCTTTCGGCC 300 CGACCAATCC TAGTGGAGGG AAATGCCATG CAATTCATTG TACGGCTAAT ATAAATGGTG 11658 | || || || | | || ||||| ||| ||||||| || | |||||| ||||| |||| CAACTAACCC TGGGCCGGGA AAATGTCATC CAATTCAATG TGTTGCTAAT ATAAACGGTG 360 AATGTCCTGG TTCACTTAGG GTACCCGGAG GATGTAACAA TCCTTGTACC ACGTTCGGAG 11598 |||| ||||| |||||||||| |||||||||| |||||||||| |||||||| || ||||||| AATGCCCTGG TTCACTTAGG GTACCCGGAG GATGTAACAA CCCTTGTACT ACATTCGGAG 420 GACAACAATA TTGTTGCAC 11579 |||||||||| ||||||||| GACAACAATA TTGTTGCAC 439 hqPGS_C08HBa0235H18.1-_SGN-E208167+ (12017 11579) ******************************************************************************** EST sequence 1101 +strand 411 n (File: SGN-E273584+) 1 GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG 61 ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT 121 CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC 181 CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC 241 GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG AAAATGTCAC 301 GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA GGTACCTGGA 361 GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC C Predicted gene structure (within gDNA segment 12732 to 9663): Exon 1 11988 11579 ( 410 n); cDNA 1 410 ( 410 n); score: 0.910 MATCH C08HBa0235H18.1- SGN-E273584+ 0.910 410 0.998 C PGS_C08HBa0235H18.1-_SGN-E273584+ (11988 11579) Alignment (genomic DNA sequence = upper lines): GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG GGGCACTAAG 11929 |||||||||| |||| |||| |||||||||| |||||||||| |||| ||||| ||| |||||| GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG 60 ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG AGGTTCATGT 11869 |||||||||| |||||||||| ||| |||| |||||| ||| ||| || || |||| ||||| ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT 120 CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC ACCAAACACC 11809 |||||||||| |||||||||| ||||| || |||||||| | |||||||||| ||||||||| CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC 180 CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT TTCTTTAGTC 11749 || ||||||| |||||||||| |||||||||| ||| |||||| | |||||||| |||||||||| CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC 240 GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG GAAATGCCAT 11689 |||||||||| |||||||||| |||||| ||| || || || | |||||||||| ||||| || GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG AAAATGTCAC 300 GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG GGTACCCGGA 11629 |||||||||| | ||||| || |||||||||| ||||||||| | | |||| |||||| ||| GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA GGTACCTGGA 360 GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT ATTGTTGCAC 11579 |||||||||| | |||||||| |||||| ||| |||||||||| |||||||||| GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC 410 hqPGS_C08HBa0235H18.1-_SGN-E273584+ (11988 11579) ******************************************************************************** EST sequence 690 +strand 534 n (File: SGN-E250262+) 1 AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 61 TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 121 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 181 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 241 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 301 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 361 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 421 AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 481 GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTG Predicted gene structure (within gDNA segment 13834 to 9733): Exon 1 12118 11585 ( 534 n); cDNA 1 534 ( 534 n); score: 0.903 MATCH C08HBa0235H18.1- SGN-E250262+ 0.903 534 1.000 C PGS_C08HBa0235H18.1-_SGN-E250262+ (12118 11585) Alignment (genomic DNA sequence = upper lines): AAACATGGCC TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG TGACTTACAC 12059 |||||||| | ||||||| || |||||||||| | ||||| | ||| || || ||||||| || AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 60 TTATGCTGCC ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG CGGCGTCGAC 11999 |||||||||| ||| | |||| |||||||||| |||||||||| ||||| |||| |||| ||||| TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 120 CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG 11939 || |||||| |||||||||| |||| |||| |||||||||| |||||||||| |||| ||||| TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 180 GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG 11879 ||| |||||| |||||||||| |||||||||| ||| |||| |||||| ||| ||| || || GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 240 AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC 11819 |||| ||||| |||||||||| |||||||||| ||||| || |||||||| | |||||||||| AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 300 ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT 11759 ||||||||| || ||||||| |||||||||| |||||||||| ||| |||||| | |||||||| CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 360 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG 11699 |||||||||| |||||||||| |||||||||| |||||| ||| || || || | |||||||||| TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 420 GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG 11639 ||||| || |||||||||| | ||||| || |||||||||| ||||||||| | | |||| AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 480 GGTACCCGGA GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT ATTG 11585 |||||| ||| |||||||||| | |||||||| |||||| ||| |||||||||| |||| GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTG 534 hqPGS_C08HBa0235H18.1-_SGN-E250262+ (12118 11585) ******************************************************************************** EST sequence 992 +strand 516 n (File: SGN-E274937+) 1 CATCTTCTTT TGTTCTCTTC TTCCTTCTTT GTGTGACTTA TACTTATGCT GCCACTATTG 61 AGGTACGCAA CAACTGTCCA TACACCGTTT GGGCGGCATC GACTCCGATA GGCGGTGGTC 121 GACGTCTCAA TCGAGGCCAA ACATGGGTCA TCAATGCTCC GAGGGGAACT AAGATGGCAC 181 GTATATGGGG TCGTACTGGT TGCAACTTTA ATGCTGCAGG CAGAGGTACA TGTCAGACTG 241 GTGATTGTGG TGGAGTCTTA CAGTGTACCG GATGGGGCAA ACCCCCAAAC ACCCTAGCCG 301 AGTACGCCTT GGACCAGTTT AGCAACTTAG ATTTTTGGGA CATTTCTTTA GTCGATGGAT 361 TTAATATTCC AATGACTTTT GCCCCAACAA AACCTAGTGG AGGAAAATGT CACGCAATTC 421 ATTGCACGGC CAATATAAAT GGTGAATGTC CTCGCGCCCT TAAGGTACCT GGAGGATGTA 481 ACAACCCTTG TACCACGTTT GGAGGACAAC AATATT Predicted gene structure (within gDNA segment 13664 to 9743): Exon 1 12100 11586 ( 515 n); cDNA 2 516 ( 515 n); score: 0.903 MATCH C08HBa0235H18.1- SGN-E274937+ 0.903 515 0.998 C PGS_C08HBa0235H18.1-_SGN-E274937+ (12100 11586) Alignment (genomic DNA sequence = upper lines): ATCTTCTTTT GTTTTCTTCC TTCTTGCTTT TGTGACTTAC ACTTATGCTG CCACTTTCGA 12041 |||||||||| ||| ||||| | ||| || ||||||||| |||||||||| ||||| | || ATCTTCTTTT GTTCTCTTCT TCCTTCTTTG TGTGACTTAT ACTTATGCTG CCACTATTGA 61 GGTACGCAAC AACTGTCCAT ACACCGTCTG GGCGGCGTCG ACCCCAATAG GCGGTGGTCG 11981 |||||||||| |||||||||| ||||||| || |||||| ||| || || |||| |||||||||| GGTACGCAAC AACTGTCCAT ACACCGTTTG GGCGGCATCG ACTCCGATAG GCGGTGGTCG 121 ACGTCTTGAT CGAGGCCAAA CATGGGTCAT CAATGCACCG AGGGGCACTA AGATGGCACG 11921 |||||| || |||||||||| |||||||||| |||||| ||| ||||| |||| |||||||||| ACGTCTCAAT CGAGGCCAAA CATGGGTCAT CAATGCTCCG AGGGGAACTA AGATGGCACG 181 TATATGGGGT CGTACGAATT GCAACTTTGA TGGTGCTGGT AGAGGTTCAT GTCAGACTGG 11861 |||||||||| ||||| || |||||||| | || ||| || |||||| ||| |||||||||| TATATGGGGT CGTACTGGTT GCAACTTTAA TGCTGCAGGC AGAGGTACAT GTCAGACTGG 241 TGATTGTGGT GGGGTCTTGC AATGTACCGG GTGGGGCAAA CCACCAAACA CCCTGGCCGA 11801 |||||||||| || ||||| | | |||||||| ||||||||| || ||||||| |||| ||||| TGATTGTGGT GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAACA CCCTAGCCGA 301 GTACGCCTTG GACCAGTTTA GCAACCTAGA TTTCTGGGAC ATTTCTTTAG TCGATGGATT 11741 |||||||||| |||||||||| ||||| |||| ||| |||||| |||||||||| |||||||||| GTACGCCTTG GACCAGTTTA GCAACTTAGA TTTTTGGGAC ATTTCTTTAG TCGATGGATT 361 TAATATTCCA ATGACTTTCG CCCCGACCAA TCCTAGTGGA GGGAAATGCC ATGCAATTCA 11681 |||||||||| |||||||| | |||| || || ||||||||| || ||||| | | |||||||| TAATATTCCA ATGACTTTTG CCCCAACAAA ACCTAGTGGA GGAAAATGTC ACGCAATTCA 421 TTGTACGGCT AATATAAATG GTGAATGTCC TGGTTCACTT AGGGTACCCG GAGGATGTAA 11621 ||| ||||| |||||||||| |||||||||| | | | ||| | |||||| | |||||||||| TTGCACGGCC AATATAAATG GTGAATGTCC TCGCGCCCTT AAGGTACCTG GAGGATGTAA 481 CAATCCTTGT ACCACGTTCG GAGGACAACA ATATT 11586 ||| |||||| |||||||| | |||||||||| ||||| CAACCCTTGT ACCACGTTTG GAGGACAACA ATATT 516 hqPGS_C08HBa0235H18.1-_SGN-E274937+ (12100 11586) ******************************************************************************** EST sequence 729 +strand 390 n (File: SGN-E205109+) 1 TCAATAAAGG CCAATCATGG GTCATCAATG CTCCGAGGGG AACTAAGATG GCACGTATAT 61 GGGGTCGTAC TGGTTGCAAC TTTAATGCTG CAGGCAGAGG TACATGTCAG ACTGGTGATT 121 GTGGTGGAGT CTTACAGTGT ACCGGATGGG GCAAACCCCC AAACACCCTA GCCGAGTACG 181 CCTTGGACCA GTTTAGCAAC TTAGATTTTT GGGACATTTC TTTAGTCGAT GGATTTAATA 241 TTCCAATGAC TTTTGCCCCA ACAAAACCTA GTGGAGGAAA ATGTCACGCA ATTCATTGCA 301 CGGCCAATAT AAATGGTGAA TGTACTCGCG CCCTTAATGT ACCTGGAGGA TGTAACAACC 361 CTTGTACCAC GTTTGGAGGA CAACAATATT Predicted gene structure (within gDNA segment 12710 to 9743): Exon 1 11972 11586 ( 387 n); cDNA 4 390 ( 387 n); score: 0.897 MATCH C08HBa0235H18.1- SGN-E205109+ 0.897 387 0.992 C PGS_C08HBa0235H18.1-_SGN-E205109+ (11972 11586) Alignment (genomic DNA sequence = upper lines): ATCGAGGCCA AACATGGGTC ATCAATGCAC CGAGGGGCAC TAAGATGGCA CGTATATGGG 11913 || |||||| | |||||||| |||||||| | ||||||| || |||||||||| |||||||||| ATAAAGGCCA ATCATGGGTC ATCAATGCTC CGAGGGGAAC TAAGATGGCA CGTATATGGG 63 GTCGTACGAA TTGCAACTTT GATGGTGCTG GTAGAGGTTC ATGTCAGACT GGTGATTGTG 11853 ||||||| |||||||||| ||| ||| | | |||||| | |||||||||| |||||||||| GTCGTACTGG TTGCAACTTT AATGCTGCAG GCAGAGGTAC ATGTCAGACT GGTGATTGTG 123 GTGGGGTCTT GCAATGTACC GGGTGGGGCA AACCACCAAA CACCCTGGCC GAGTACGCCT 11793 |||| ||||| || |||||| || ||||||| |||| ||||| |||||| ||| |||||||||| GTGGAGTCTT ACAGTGTACC GGATGGGGCA AACCCCCAAA CACCCTAGCC GAGTACGCCT 183 TGGACCAGTT TAGCAACCTA GATTTCTGGG ACATTTCTTT AGTCGATGGA TTTAATATTC 11733 |||||||||| ||||||| || ||||| |||| |||||||||| |||||||||| |||||||||| TGGACCAGTT TAGCAACTTA GATTTTTGGG ACATTTCTTT AGTCGATGGA TTTAATATTC 243 CAATGACTTT CGCCCCGACC AATCCTAGTG GAGGGAAATG CCATGCAATT CATTGTACGG 11673 |||||||||| ||||| || || ||||||| |||| ||||| || |||||| ||||| |||| CAATGACTTT TGCCCCAACA AAACCTAGTG GAGGAAAATG TCACGCAATT CATTGCACGG 303 CTAATATAAA TGGTGAATGT CCTGGTTCAC TTAGGGTACC CGGAGGATGT AACAATCCTT 11613 | |||||||| |||||||||| || | | | ||| ||||| ||||||||| ||||| |||| CCAATATAAA TGGTGAATGT ACTCGCGCCC TTAATGTACC TGGAGGATGT AACAACCCTT 363 GTACCACGTT CGGAGGACAA CAATATT 11586 |||||||||| ||||||||| ||||||| GTACCACGTT TGGAGGACAA CAATATT 390 hqPGS_C08HBa0235H18.1-_SGN-E205109+ (11972 11586) ******************************************************************************** EST sequence 1046 +strand 530 n (File: SGN-E275676+) 1 AACATGGGCT ACTTGACATC TTCTTTTGTT CTCTTCTTCC TTCTTTGTGT GACTTATACT 61 TATGCTGCCA CTATTGAGGT ACGCAACAAC TGTCCATACA CCGTTTGGGC GGCATCGACT 121 CCGATAGGCG GTGGTCGACG TCTCAATCGA GGCCAAACAT GGGTCATCAA TGCTCCGAGG 181 GGAACTAAGA TGGCACGTAT ATGGGGTCGT ACTGGTTGCA ACTTTAATGC TGCAGGCAGA 241 GGTACATGTC AGACTGGTGA TTGTGGTGGA GTCTTACAGT GTACCGGATG GGGCAAACCC 301 CCAAACACCC TAGCCGAGTA CGCCTTGGAC CAGTTTAGCA ACTTAGATTT TTGGGACATT 361 TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTTGCCC CAACAAAACC TAGTGGAGGA 421 AAATGTCACG CAATTCATTG CACGGCCAAT ATAAATGGTG AATGTCCTCG CGCCCTTAAG 481 GTACCTGGAG GATGTAACAA CCCTTGTACC ACGTTTGGAG GACAACAATA Predicted gene structure (within gDNA segment 13824 to 9763): Exon 1 12117 11588 ( 530 n); cDNA 1 530 ( 530 n); score: 0.902 MATCH C08HBa0235H18.1- SGN-E275676+ 0.902 530 1.000 C PGS_C08HBa0235H18.1-_SGN-E275676+ (12117 11588) Alignment (genomic DNA sequence = upper lines): AACATGGCCT ACTTGAGATC TTCTTTTGTT TTCTTCCTTC TTGCTTTTGT GACTTACACT 12058 ||||||| || |||||| ||| |||||||||| ||||| | | || || ||| |||||| ||| AACATGGGCT ACTTGACATC TTCTTTTGTT CTCTTCTTCC TTCTTTGTGT GACTTATACT 60 TATGCTGCCA CTTTCGAGGT ACGCAACAAC TGTCCATACA CCGTCTGGGC GGCGTCGACC 11998 |||||||||| || | ||||| |||||||||| |||||||||| |||| ||||| ||| ||||| TATGCTGCCA CTATTGAGGT ACGCAACAAC TGTCCATACA CCGTTTGGGC GGCATCGACT 120 CCAATAGGCG GTGGTCGACG TCTTGATCGA GGCCAAACAT GGGTCATCAA TGCACCGAGG 11938 || ||||||| |||||||||| ||| ||||| |||||||||| |||||||||| ||| |||||| CCGATAGGCG GTGGTCGACG TCTCAATCGA GGCCAAACAT GGGTCATCAA TGCTCCGAGG 180 GGCACTAAGA TGGCACGTAT ATGGGGTCGT ACGAATTGCA ACTTTGATGG TGCTGGTAGA 11878 || ||||||| |||||||||| |||||||||| || ||||| ||||| ||| ||| || ||| GGAACTAAGA TGGCACGTAT ATGGGGTCGT ACTGGTTGCA ACTTTAATGC TGCAGGCAGA 240 GGTTCATGTC AGACTGGTGA TTGTGGTGGG GTCTTGCAAT GTACCGGGTG GGGCAAACCA 11818 ||| |||||| |||||||||| ||||||||| ||||| || | ||||||| || ||||||||| GGTACATGTC AGACTGGTGA TTGTGGTGGA GTCTTACAGT GTACCGGATG GGGCAAACCC 300 CCAAACACCC TGGCCGAGTA CGCCTTGGAC CAGTTTAGCA ACCTAGATTT CTGGGACATT 11758 |||||||||| | |||||||| |||||||||| |||||||||| || ||||||| ||||||||| CCAAACACCC TAGCCGAGTA CGCCTTGGAC CAGTTTAGCA ACTTAGATTT TTGGGACATT 360 TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTCGCCC CGACCAATCC TAGTGGAGGG 11698 |||||||||| |||||||||| |||||||||| ||||| |||| | || || || ||||||||| TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTTGCCC CAACAAAACC TAGTGGAGGA 420 AAATGCCATG CAATTCATTG TACGGCTAAT ATAAATGGTG AATGTCCTGG TTCACTTAGG 11638 ||||| || | |||||||||| ||||| ||| |||||||||| |||||||| | | |||| | AAATGTCACG CAATTCATTG CACGGCCAAT ATAAATGGTG AATGTCCTCG CGCCCTTAAG 480 GTACCCGGAG GATGTAACAA TCCTTGTACC ACGTTCGGAG GACAACAATA 11588 ||||| |||| |||||||||| ||||||||| ||||| |||| |||||||||| GTACCTGGAG GATGTAACAA CCCTTGTACC ACGTTTGGAG GACAACAATA 530 hqPGS_C08HBa0235H18.1-_SGN-E275676+ (12117 11588) ******************************************************************************** EST sequence 984 +strand 521 n (File: SGN-E274932+) 1 TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC TTATGCTGCC 61 ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC TCCGATAGGC 121 GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG 181 ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT 241 CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC 301 CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC 361 GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG AAAATGTCAC 421 GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA GGTACCTGGA 481 GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT A Predicted gene structure (within gDNA segment 13734 to 9763): Exon 1 12108 11588 ( 521 n); cDNA 1 521 ( 521 n); score: 0.902 MATCH C08HBa0235H18.1- SGN-E274932+ 0.902 521 1.000 C PGS_C08HBa0235H18.1-_SGN-E274932+ (12108 11588) Alignment (genomic DNA sequence = upper lines): TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG TGACTTACAC TTATGCTGCC 12049 ||||||| || |||||||||| | ||||| | ||| || || ||||||| || |||||||||| TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC TTATGCTGCC 60 ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG CGGCGTCGAC CCCAATAGGC 11989 ||| | |||| |||||||||| |||||||||| ||||| |||| |||| ||||| || |||||| ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC TCCGATAGGC 120 GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG GGGCACTAAG 11929 |||||||||| |||| |||| |||||||||| |||||||||| |||| ||||| ||| |||||| GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG 180 ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG AGGTTCATGT 11869 |||||||||| |||||||||| ||| |||| |||||| ||| ||| || || |||| ||||| ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT 240 CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC ACCAAACACC 11809 |||||||||| |||||||||| ||||| || |||||||| | |||||||||| ||||||||| CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC 300 CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT TTCTTTAGTC 11749 || ||||||| |||||||||| |||||||||| ||| |||||| | |||||||| |||||||||| CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC 360 GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG GAAATGCCAT 11689 |||||||||| |||||||||| |||||| ||| || || || | |||||||||| ||||| || GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG AAAATGTCAC 420 GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG GGTACCCGGA 11629 |||||||||| | ||||| || |||||||||| ||||||||| | | |||| |||||| ||| GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA GGTACCTGGA 480 GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT A 11588 |||||||||| | |||||||| |||||| ||| |||||||||| | GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT A 521 hqPGS_C08HBa0235H18.1-_SGN-E274932+ (12108 11588) ******************************************************************************** EST sequence 772 +strand 506 n (File: SGN-E252003+) 1 TTTGTTCTCT TCTTCCTTCT TTGTGTGACT TATACTTATG CTGCCACTAT TGAGGTACGC 61 AACAACTGTC CATACACCGT TTGGGCGGCA TCGACTCCGA TAGGCGGTGG TCGACGTCTC 121 AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC ACGTATATGG 181 GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC TGGTGATTGT 241 GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC CGAGTACGCC 301 TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG ATTTAATATT 361 CCAATGACTT TTGCCCCAAC AAAACCTAGT GGAGGAAAAT GTCACGCAAT TCATTGCACG 421 GCCAATATAA ATGGTGAATG TCCTCGCGCC CTTAAGGTAC CTGGAGGATG TAACAACCCT 481 TGTACCACGT TTGGAGGACA ACAATA Predicted gene structure (within gDNA segment 13584 to 9763): Exon 1 12093 11588 ( 506 n); cDNA 1 506 ( 506 n); score: 0.901 MATCH C08HBa0235H18.1- SGN-E252003+ 0.901 506 1.000 C PGS_C08HBa0235H18.1-_SGN-E252003+ (12093 11588) Alignment (genomic DNA sequence = upper lines): TTTGTTTTCT TCCTTCTTGC TTTTGTGACT TACACTTATG CTGCCACTTT CGAGGTACGC 12034 |||||| ||| || | ||| || ||||||| || ||||||| |||||||| | ||||||||| TTTGTTCTCT TCTTCCTTCT TTGTGTGACT TATACTTATG CTGCCACTAT TGAGGTACGC 60 AACAACTGTC CATACACCGT CTGGGCGGCG TCGACCCCAA TAGGCGGTGG TCGACGTCTT 11974 |||||||||| |||||||||| |||||||| ||||| || | |||||||||| ||||||||| AACAACTGTC CATACACCGT TTGGGCGGCA TCGACTCCGA TAGGCGGTGG TCGACGTCTC 120 GATCGAGGCC AAACATGGGT CATCAATGCA CCGAGGGGCA CTAAGATGGC ACGTATATGG 11914 ||||||||| |||||||||| ||||||||| |||||||| | |||||||||| |||||||||| AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC ACGTATATGG 180 GGTCGTACGA ATTGCAACTT TGATGGTGCT GGTAGAGGTT CATGTCAGAC TGGTGATTGT 11854 |||||||| ||||||||| | ||| ||| || |||||| |||||||||| |||||||||| GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC TGGTGATTGT 240 GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA ACACCCTGGC CGAGTACGCC 11794 ||||| |||| | || ||||| ||| |||||| ||||| |||| ||||||| || |||||||||| GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC CGAGTACGCC 300 TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG ATTTAATATT 11734 |||||||||| |||||||| | |||||| ||| |||||||||| |||||||||| |||||||||| TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG ATTTAATATT 360 CCAATGACTT TCGCCCCGAC CAATCCTAGT GGAGGGAAAT GCCATGCAAT TCATTGTACG 11674 |||||||||| | ||||| || || |||||| ||||| |||| | || ||||| |||||| ||| CCAATGACTT TTGCCCCAAC AAAACCTAGT GGAGGAAAAT GTCACGCAAT TCATTGCACG 420 GCTAATATAA ATGGTGAATG TCCTGGTTCA CTTAGGGTAC CCGGAGGATG TAACAATCCT 11614 || ||||||| |||||||||| |||| | | |||| ||||| | |||||||| |||||| ||| GCCAATATAA ATGGTGAATG TCCTCGCGCC CTTAAGGTAC CTGGAGGATG TAACAACCCT 480 TGTACCACGT TCGGAGGACA ACAATA 11588 |||||||||| | |||||||| |||||| TGTACCACGT TTGGAGGACA ACAATA 506 hqPGS_C08HBa0235H18.1-_SGN-E252003+ (12093 11588) ******************************************************************************** EST sequence 628 +strand 418 n (File: SGN-E204875+) 1 CATCGACTCC GATAGGCGGT GGTCGACGTC TCAATCGAGG CCAAACATGG GTCATCAATG 61 CTCCGAGGGG AACTAAGATG GCACGTATAT GGGGTCGTAC TGGTTGCAAC TTTAATGCTG 121 CAGGCAGAGG TACATGTCAG ACTGGTGATT GTGGTGGAGT CTTACAGTGT ACCGGATGGG 181 GCAAACCCCC AAACACCCTA GCCGAGTACG CCTTGGACCA GTTTAGCAAC TTAGATTTTT 241 GGGACATTTC TTTAGTCGAT GGATTTAATA TTCCAATGAC TTTTGCCCCA ACAAAACCTA 301 GTGGAGGAAA ATGTCACGCA ATTCATTGCA CGGCCAATAT AAATGGTGAA TGTCCTCGCG 361 CCCTTAATGT ACCTGGAGGA TGTAACAACC CTTGTACCAC GTTTGGAGGA CAACAATA Predicted gene structure (within gDNA segment 12704 to 9763): Exon 1 12003 11588 ( 416 n); cDNA 3 418 ( 416 n); score: 0.904 MATCH C08HBa0235H18.1- SGN-E204875+ 0.904 416 0.995 C PGS_C08HBa0235H18.1-_SGN-E204875+ (12003 11588) Alignment (genomic DNA sequence = upper lines): TCGACCCCAA TAGGCGGTGG TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA 11944 ||||| || | |||||||||| ||||||||| ||||||||| |||||||||| ||||||||| TCGACTCCGA TAGGCGGTGG TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT 62 CCGAGGGGCA CTAAGATGGC ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT 11884 |||||||| | |||||||||| |||||||||| |||||||| ||||||||| | ||| ||| CCGAGGGGAA CTAAGATGGC ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA 122 GGTAGAGGTT CATGTCAGAC TGGTGATTGT GGTGGGGTCT TGCAATGTAC CGGGTGGGGC 11824 || |||||| |||||||||| |||||||||| ||||| |||| | || ||||| ||| |||||| GGCAGAGGTA CATGTCAGAC TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC 182 AAACCACCAA ACACCCTGGC CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG 11764 ||||| |||| ||||||| || |||||||||| |||||||||| |||||||| | |||||| ||| AAACCCCCAA ACACCCTAGC CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG 242 GACATTTCTT TAGTCGATGG ATTTAATATT CCAATGACTT TCGCCCCGAC CAATCCTAGT 11704 |||||||||| |||||||||| |||||||||| |||||||||| | ||||| || || |||||| GACATTTCTT TAGTCGATGG ATTTAATATT CCAATGACTT TTGCCCCAAC AAAACCTAGT 302 GGAGGGAAAT GCCATGCAAT TCATTGTACG GCTAATATAA ATGGTGAATG TCCTGGTTCA 11644 ||||| |||| | || ||||| |||||| ||| || ||||||| |||||||||| |||| | | GGAGGAAAAT GTCACGCAAT TCATTGCACG GCCAATATAA ATGGTGAATG TCCTCGCGCC 362 CTTAGGGTAC CCGGAGGATG TAACAATCCT TGTACCACGT TCGGAGGACA ACAATA 11588 |||| |||| | |||||||| |||||| ||| |||||||||| | |||||||| |||||| CTTAATGTAC CTGGAGGATG TAACAACCCT TGTACCACGT TTGGAGGACA ACAATA 418 hqPGS_C08HBa0235H18.1-_SGN-E204875+ (12003 11588) ******************************************************************************** EST sequence 1092 +strand 266 n (File: SGN-E209055+) 1 GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC CGAGTACGCC 61 TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG ATTTAATATT 121 CCAATGACTT TTGCCCCAAC AAAACCTAGT GGAGGAAAAT GTCACGCAAT TCATTGCACG 181 GCCAATATAA ATGGTGAATG TCCTCGCGCC CTTAAGGTAC CTGGAGGATG TAACAACCCT 241 TGTACCACGT TTGGAGGACA ACAATA Predicted gene structure (within gDNA segment 12885 to 9763): Exon 1 11853 11588 ( 266 n); cDNA 1 266 ( 266 n); score: 0.906 MATCH C08HBa0235H18.1- SGN-E209055+ 0.906 266 1.000 C PGS_C08HBa0235H18.1-_SGN-E209055+ (11853 11588) Alignment (genomic DNA sequence = upper lines): GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA ACACCCTGGC CGAGTACGCC 11794 ||||| |||| | || ||||| ||| |||||| ||||| |||| ||||||| || |||||||||| GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC CGAGTACGCC 60 TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG ATTTAATATT 11734 |||||||||| |||||||| | |||||| ||| |||||||||| |||||||||| |||||||||| TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG ATTTAATATT 120 CCAATGACTT TCGCCCCGAC CAATCCTAGT GGAGGGAAAT GCCATGCAAT TCATTGTACG 11674 |||||||||| | ||||| || || |||||| ||||| |||| | || ||||| |||||| ||| CCAATGACTT TTGCCCCAAC AAAACCTAGT GGAGGAAAAT GTCACGCAAT TCATTGCACG 180 GCTAATATAA ATGGTGAATG TCCTGGTTCA CTTAGGGTAC CCGGAGGATG TAACAATCCT 11614 || ||||||| |||||||||| |||| | | |||| ||||| | |||||||| |||||| ||| GCCAATATAA ATGGTGAATG TCCTCGCGCC CTTAAGGTAC CTGGAGGATG TAACAACCCT 240 TGTACCACGT TCGGAGGACA ACAATA 11588 |||||||||| | |||||||| |||||| TGTACCACGT TTGGAGGACA ACAATA 266 hqPGS_C08HBa0235H18.1-_SGN-E209055+ (11853 11588) ******************************************************************************** EST sequence 1034 +strand 467 n (File: SGN-E266663+) 1 TATGCTGCCA CTATTGAGGT ACTTATACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 61 TCCTATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 121 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 181 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG CGTACCGGAT GGGGCAAACC 241 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 301 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 361 AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 421 AGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAAC Predicted gene structure (within gDNA segment 13234 to 9803): Exon 1 12057 11592 ( 466 n); cDNA 1 467 ( 467 n); score: 0.894 MATCH C08HBa0235H18.1- SGN-E266663+ 0.894 466 0.998 C PGS_C08HBa0235H18.1-_SGN-E266663+ (12057 11592) Alignment (genomic DNA sequence = upper lines): TATGCTGCCA CTTTCGAGGT ACGCA-ACAA CTGTCCATAC ACCGTCTGGG CGGCGTCGAC 11999 |||||||||| || | ||||| || | |||| |||||||||| ||||| |||| |||| ||||| TATGCTGCCA CTATTGAGGT ACTTATACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 60 CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG 11939 || |||||| |||||||||| |||| |||| |||||||||| |||||||||| |||| ||||| TCCTATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 120 GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG 11879 ||| |||||| |||||||||| |||||||||| ||| |||| |||||| ||| ||| || || GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 180 AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC 11819 |||| ||||| |||||||||| |||||||||| ||||| || ||||||| | |||||||||| AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG CGTACCGGAT GGGGCAAACC 240 ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT 11759 ||||||||| || ||||||| |||||||||| |||||||||| ||| |||||| | |||||||| CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 300 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG 11699 |||||||||| |||||||||| |||||||||| |||||| ||| || || || | |||||||||| TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 360 GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG 11639 ||||| || |||||||||| | ||||| || |||||||||| ||||||||| | | |||| AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 420 GGTACCCGGA GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAAC 11592 ||||| ||| |||||||||| | |||||||| |||||| ||| ||||||| AGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAAC 467 hqPGS_C08HBa0235H18.1-_SGN-E266663+ (12057 11592) ******************************************************************************** EST sequence 1010 +strand 524 n (File: SGN-E246947+) 1 AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 61 TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 121 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 181 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 241 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 301 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 361 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 421 AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 481 GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGAC Predicted gene structure (within gDNA segment 13834 to 9833): Exon 1 12118 11595 ( 524 n); cDNA 1 524 ( 524 n); score: 0.901 MATCH C08HBa0235H18.1- SGN-E246947+ 0.901 524 1.000 C PGS_C08HBa0235H18.1-_SGN-E246947+ (12118 11595) Alignment (genomic DNA sequence = upper lines): AAACATGGCC TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG TGACTTACAC 12059 |||||||| | ||||||| || |||||||||| | ||||| | ||| || || ||||||| || AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 60 TTATGCTGCC ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG CGGCGTCGAC 11999 |||||||||| ||| | |||| |||||||||| |||||||||| ||||| |||| |||| ||||| TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 120 CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG 11939 || |||||| |||||||||| |||| |||| |||||||||| |||||||||| |||| ||||| TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 180 GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG 11879 ||| |||||| |||||||||| |||||||||| ||| |||| |||||| ||| ||| || || GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 240 AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC 11819 |||| ||||| |||||||||| |||||||||| ||||| || |||||||| | |||||||||| AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 300 ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT 11759 ||||||||| || ||||||| |||||||||| |||||||||| ||| |||||| | |||||||| CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 360 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG 11699 |||||||||| |||||||||| |||||||||| |||||| ||| || || || | |||||||||| TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 420 GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG 11639 ||||| || |||||||||| | ||||| || |||||||||| ||||||||| | | |||| AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 480 GGTACCCGGA GGATGTAACA ATCCTTGTAC CACGTTCGGA GGAC 11595 |||||| ||| |||||||||| | |||||||| |||||| ||| |||| GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGAC 524 hqPGS_C08HBa0235H18.1-_SGN-E246947+ (12118 11595) ******************************************************************************** EST sequence 1030 +strand 350 n (File: SGN-E275799+) 1 TGCTCCGAGG GGAACTAAGA TGGCACGTAT ATGGGGTCGT ACTGGTTGCA ACTTTAATGC 61 TGCAGGCAGA GGTACATGTC AGACTGGTGA TTGTGGTGGA GTCTTACAGT GTACCGGATG 121 GGGCAAACCC CCAAACACCC TAGCCGAGTA CGCCTTGGAC CAGTTTAGCA ACTTAGATTT 181 TTGGGACATT TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTTGCCC CAACAAAACC 241 TAGTGGAGGA AAATGTCACG CAATTCATTG CACGGCCAAT ATAAATGGTG AATGTCCTCG 301 CGCCCTTAAA GTACCTGGAG GATGTAACAA CCCTTGTACC ACGTTTGGAG Predicted gene structure (within gDNA segment 13825 to 9863): Exon 1 11947 11598 ( 350 n); cDNA 1 350 ( 350 n); score: 0.897 MATCH C08HBa0235H18.1- SGN-E275799+ 0.897 350 1.000 C PGS_C08HBa0235H18.1-_SGN-E275799+ (11947 11598) Alignment (genomic DNA sequence = upper lines): TGCACCGAGG GGCACTAAGA TGGCACGTAT ATGGGGTCGT ACGAATTGCA ACTTTGATGG 11888 ||| |||||| || ||||||| |||||||||| |||||||||| || ||||| ||||| ||| TGCTCCGAGG GGAACTAAGA TGGCACGTAT ATGGGGTCGT ACTGGTTGCA ACTTTAATGC 60 TGCTGGTAGA GGTTCATGTC AGACTGGTGA TTGTGGTGGG GTCTTGCAAT GTACCGGGTG 11828 ||| || ||| ||| |||||| |||||||||| ||||||||| ||||| || | ||||||| || TGCAGGCAGA GGTACATGTC AGACTGGTGA TTGTGGTGGA GTCTTACAGT GTACCGGATG 120 GGGCAAACCA CCAAACACCC TGGCCGAGTA CGCCTTGGAC CAGTTTAGCA ACCTAGATTT 11768 ||||||||| |||||||||| | |||||||| |||||||||| |||||||||| || ||||||| GGGCAAACCC CCAAACACCC TAGCCGAGTA CGCCTTGGAC CAGTTTAGCA ACTTAGATTT 180 CTGGGACATT TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTCGCCC CGACCAATCC 11708 ||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| | || || || TTGGGACATT TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTTGCCC CAACAAAACC 240 TAGTGGAGGG AAATGCCATG CAATTCATTG TACGGCTAAT ATAAATGGTG AATGTCCTGG 11648 ||||||||| ||||| || | |||||||||| ||||| ||| |||||||||| |||||||| | TAGTGGAGGA AAATGTCACG CAATTCATTG CACGGCCAAT ATAAATGGTG AATGTCCTCG 300 TTCACTTAGG GTACCCGGAG GATGTAACAA TCCTTGTACC ACGTTCGGAG 11598 | |||| ||||| |||| |||||||||| ||||||||| ||||| |||| CGCCCTTAAA GTACCTGGAG GATGTAACAA CCCTTGTACC ACGTTTGGAG 350 hqPGS_C08HBa0235H18.1-_SGN-E275799+ (11947 11598) ******************************************************************************** EST sequence 764 +strand 518 n (File: SGN-E214938+) 1 CAAACATGGG CTACTTGACA TCTTCTTTTG TTCTCTTCTT CCTTCTTTGT GTGACTTATA 61 CTTATGCTGC CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA 121 CTCCGATAGG CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA 181 GGGGAACTAA GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA 241 GAGGTACATG TCAGACTGGT GATTGTGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC 301 CCCCAAACAC CCTAGCCGAG TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA 361 TTTCTTTAGT CGATGGATTT AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG 421 GAAAATGTCA CGCAATTCAT TGCACGGCCA ATATAAATGG TGAATGTCCT CGCGCCCTTA 481 AGGTACCTGG AGGATGTAAC AACCCTTGTA CCACGTTT Predicted gene structure (within gDNA segment 13844 to 9903): Exon 1 12119 11603 ( 517 n); cDNA 1 517 ( 517 n); score: 0.901 MATCH C08HBa0235H18.1- SGN-E214938+ 0.901 517 0.998 C PGS_C08HBa0235H18.1-_SGN-E214938+ (12119 11603) Alignment (genomic DNA sequence = upper lines): CAAACATGGC CTACTTGAGA TCTTCTTTTG TTTTCTTCCT TCTTGCTTTT GTGACTTACA 12060 ||||||||| |||||||| | |||||||||| || ||||| | ||| || | |||||||| | CAAACATGGG CTACTTGACA TCTTCTTTTG TTCTCTTCTT CCTTCTTTGT GTGACTTATA 60 CTTATGCTGC CACTTTCGAG GTACGCAACA ACTGTCCATA CACCGTCTGG GCGGCGTCGA 12000 |||||||||| |||| | ||| |||||||||| |||||||||| |||||| ||| ||||| |||| CTTATGCTGC CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA 120 CCCCAATAGG CGGTGGTCGA CGTCTTGATC GAGGCCAAAC ATGGGTCATC AATGCACCGA 11940 | || ||||| |||||||||| ||||| ||| |||||||||| |||||||||| ||||| |||| CTCCGATAGG CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA 180 GGGGCACTAA GATGGCACGT ATATGGGGTC GTACGAATTG CAACTTTGAT GGTGCTGGTA 11880 |||| ||||| |||||||||| |||||||||| |||| ||| ||||||| || | ||| || | GGGGAACTAA GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA 240 GAGGTTCATG TCAGACTGGT GATTGTGGTG GGGTCTTGCA ATGTACCGGG TGGGGCAAAC 11820 ||||| |||| |||||||||| |||||||||| | ||||| || |||||||| |||||||||| GAGGTACATG TCAGACTGGT GATTGTGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC 300 CACCAAACAC CCTGGCCGAG TACGCCTTGG ACCAGTTTAG CAACCTAGAT TTCTGGGACA 11760 | |||||||| ||| |||||| |||||||||| |||||||||| |||| ||||| || ||||||| CCCCAAACAC CCTAGCCGAG TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA 360 TTTCTTTAGT CGATGGATTT AATATTCCAA TGACTTTCGC CCCGACCAAT CCTAGTGGAG 11700 |||||||||| |||||||||| |||||||||| ||||||| || ||| || || |||||||||| TTTCTTTAGT CGATGGATTT AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG 420 GGAAATGCCA TGCAATTCAT TGTACGGCTA ATATAAATGG TGAATGTCCT GGTTCACTTA 11640 | ||||| || ||||||||| || ||||| | |||||||||| |||||||||| | | |||| GAAAATGTCA CGCAATTCAT TGCACGGCCA ATATAAATGG TGAATGTCCT CGCGCCCTTA 480 GGGTACCCGG AGGATGTAAC AATCCTTGTA CCACGTT 11603 |||||| || |||||||||| || ||||||| ||||||| AGGTACCTGG AGGATGTAAC AACCCTTGTA CCACGTT 517 hqPGS_C08HBa0235H18.1-_SGN-E214938+ (12119 11603) ******************************************************************************** EST sequence 673 +strand 457 n (File: SGN-E203662+) 1 TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 61 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 121 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 181 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 241 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 301 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 361 AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 421 GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTT Predicted gene structure (within gDNA segment 13234 to 9903): Exon 1 12058 11603 ( 456 n); cDNA 1 456 ( 456 n); score: 0.908 MATCH C08HBa0235H18.1- SGN-E203662+ 0.908 456 0.998 C PGS_C08HBa0235H18.1-_SGN-E203662+ (12058 11603) Alignment (genomic DNA sequence = upper lines): TTATGCTGCC ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG CGGCGTCGAC 11999 |||||||||| ||| | |||| |||||||||| |||||||||| ||||| |||| |||| ||||| TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 60 CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG 11939 || |||||| |||||||||| |||| |||| |||||||||| |||||||||| |||| ||||| TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 120 GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG 11879 ||| |||||| |||||||||| |||||||||| ||| |||| |||||| ||| ||| || || GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 180 AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC 11819 |||| ||||| |||||||||| |||||||||| ||||| || |||||||| | |||||||||| AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 240 ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT 11759 ||||||||| || ||||||| |||||||||| |||||||||| ||| |||||| | |||||||| CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 300 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG 11699 |||||||||| |||||||||| |||||||||| |||||| ||| || || || | |||||||||| TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 360 GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG 11639 ||||| || |||||||||| | ||||| || |||||||||| ||||||||| | | |||| AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 420 GGTACCCGGA GGATGTAACA ATCCTTGTAC CACGTT 11603 |||||| ||| |||||||||| | |||||||| |||||| GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTT 456 hqPGS_C08HBa0235H18.1-_SGN-E203662+ (12058 11603) ******************************************************************************** EST sequence 664 +strand 490 n (File: SGN-E204618+) 1 CATCTTCTTT TGTTCTGTTC TTCCTTCTTT GTGTGACTTA TACTTATGCT GCCACTATTG 61 AGGTACGCAA CAACTGTCCA TACACCGTTT GGGCGGCATC GACTCCGATA GGCGGTGGTC 121 GACGTCTCAA TCGAGGCCAA ACATGGGTCA TCAATGCTCC GAGGGGAACT AAGATGGCAC 181 GTATATGGGG TCGTACTGGT TGCAACTTTA ATGCTGCAGG CAGAGGTACA TGTCAAACTG 241 GTGATTGTGG AGGAGTCTTA CAGTGTACCG GATGGGGCAA ACCCCCAAAC ACCCTAGCCG 301 AGTACGCCTT GGACCAGTTT AGCAACTTAG ATTTTTGGGA CATTTCTTTA GTCGATGGAT 361 TTAATATTCC AATGACTTTT GCCCCAACAA AACCTAGTGG AGGAAAATGT CACGCAATTC 421 ATTGCACGGG CAATATAAAT GGTGAATGTC CTCGCGCCCT TAAGGTACCT GGAGGATGTA 481 ACAACCCTTG Predicted gene structure (within gDNA segment 13664 to 10003): Exon 1 12100 11612 ( 489 n); cDNA 2 490 ( 489 n); score: 0.892 MATCH C08HBa0235H18.1- SGN-E204618+ 0.892 489 0.998 C PGS_C08HBa0235H18.1-_SGN-E204618+ (12100 11612) Alignment (genomic DNA sequence = upper lines): ATCTTCTTTT GTTTTCTTCC TTCTTGCTTT TGTGACTTAC ACTTATGCTG CCACTTTCGA 12041 |||||||||| ||| | ||| | ||| || ||||||||| |||||||||| ||||| | || ATCTTCTTTT GTTCTGTTCT TCCTTCTTTG TGTGACTTAT ACTTATGCTG CCACTATTGA 61 GGTACGCAAC AACTGTCCAT ACACCGTCTG GGCGGCGTCG ACCCCAATAG GCGGTGGTCG 11981 |||||||||| |||||||||| ||||||| || |||||| ||| || || |||| |||||||||| GGTACGCAAC AACTGTCCAT ACACCGTTTG GGCGGCATCG ACTCCGATAG GCGGTGGTCG 121 ACGTCTTGAT CGAGGCCAAA CATGGGTCAT CAATGCACCG AGGGGCACTA AGATGGCACG 11921 |||||| || |||||||||| |||||||||| |||||| ||| ||||| |||| |||||||||| ACGTCTCAAT CGAGGCCAAA CATGGGTCAT CAATGCTCCG AGGGGAACTA AGATGGCACG 181 TATATGGGGT CGTACGAATT GCAACTTTGA TGGTGCTGGT AGAGGTTCAT GTCAGACTGG 11861 |||||||||| ||||| || |||||||| | || ||| || |||||| ||| |||| ||||| TATATGGGGT CGTACTGGTT GCAACTTTAA TGCTGCAGGC AGAGGTACAT GTCAAACTGG 241 TGATTGTGGT GGGGTCTTGC AATGTACCGG GTGGGGCAAA CCACCAAACA CCCTGGCCGA 11801 ||||||||| || ||||| | | |||||||| ||||||||| || ||||||| |||| ||||| TGATTGTGGA GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAACA CCCTAGCCGA 301 GTACGCCTTG GACCAGTTTA GCAACCTAGA TTTCTGGGAC ATTTCTTTAG TCGATGGATT 11741 |||||||||| |||||||||| ||||| |||| ||| |||||| |||||||||| |||||||||| GTACGCCTTG GACCAGTTTA GCAACTTAGA TTTTTGGGAC ATTTCTTTAG TCGATGGATT 361 TAATATTCCA ATGACTTTCG CCCCGACCAA TCCTAGTGGA GGGAAATGCC ATGCAATTCA 11681 |||||||||| |||||||| | |||| || || ||||||||| || ||||| | | |||||||| TAATATTCCA ATGACTTTTG CCCCAACAAA ACCTAGTGGA GGAAAATGTC ACGCAATTCA 421 TTGTACGGCT AATATAAATG GTGAATGTCC TGGTTCACTT AGGGTACCCG GAGGATGTAA 11621 ||| |||| |||||||||| |||||||||| | | | ||| | |||||| | |||||||||| TTGCACGGGC AATATAAATG GTGAATGTCC TCGCGCCCTT AAGGTACCTG GAGGATGTAA 481 CAATCCTTG 11612 ||| ||||| CAACCCTTG 490 hqPGS_C08HBa0235H18.1-_SGN-E204618+ (12100 11612) ******************************************************************************** EST sequence 841 +strand 467 n (File: SGN-E202224+) 1 CTTCTTTGTG TGACTTATAC TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC 61 ACCGTTTGGG CGGCATCTAC TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA 121 TGGGTCATCA ATGCTCCGAG GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC 181 AACTTTAATG CTGCAGGCAG AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG 241 TGTACCGGAT GGGGCAAACC CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC 301 AACTTAGATT TTTGGGACAT TTCTTTAGTC CATGGATTTA ATATTGCAAT GACTTTTGCC 361 CCAACAAAAC CTAGTGGAGG AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT 421 GAATGTCCTC GCGCCCTTAA AGGACCTGGA GGATGTAACA ACCCTTG Predicted gene structure (within gDNA segment 13434 to 9769): Exon 1 12078 11612 ( 467 n); cDNA 1 467 ( 467 n); score: 0.891 MATCH C08HBa0235H18.1- SGN-E202224+ 0.891 467 1.000 C PGS_C08HBa0235H18.1-_SGN-E202224+ (12078 11612) Alignment (genomic DNA sequence = upper lines): CTTGCTTTTG TGACTTACAC TTATGCTGCC ACTTTCGAGG TACGCAACAA CTGTCCATAC 12019 ||| || || ||||||| || |||||||||| ||| | |||| |||||||||| |||||||||| CTTCTTTGTG TGACTTATAC TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC 60 ACCGTCTGGG CGGCGTCGAC CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA 11959 ||||| |||| |||| || || || |||||| |||||||||| |||| |||| |||||||||| ACCGTTTGGG CGGCATCTAC TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA 120 TGGGTCATCA ATGCACCGAG GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC 11899 |||||||||| |||| ||||| ||| |||||| |||||||||| |||||||||| ||| |||| TGGGTCATCA ATGCTCCGAG GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC 180 AACTTTGATG GTGCTGGTAG AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA 11839 |||||| ||| ||| || || |||| ||||| |||||||||| |||||||||| ||||| || AACTTTAATG CTGCAGGCAG AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG 240 TGTACCGGGT GGGGCAAACC ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC 11779 |||||||| | |||||||||| ||||||||| || ||||||| |||||||||| |||||||||| TGTACCGGAT GGGGCAAACC CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC 300 AACCTAGATT TCTGGGACAT TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC 11719 ||| |||||| | |||||||| |||||||||| ||||||||| ||||| |||| |||||| ||| AACTTAGATT TTTGGGACAT TTCTTTAGTC CATGGATTTA ATATTGCAAT GACTTTTGCC 360 CCGACCAATC CTAGTGGAGG GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAATGGT 11659 || || || | |||||||||| ||||| || |||||||||| | ||||| || |||||||||| CCAACAAAAC CTAGTGGAGG AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT 420 GAATGTCCTG GTTCACTTAG GGTACCCGGA GGATGTAACA ATCCTTG 11612 ||||||||| | | |||| | ||| ||| |||||||||| | ||||| GAATGTCCTC GCGCCCTTAA AGGACCTGGA GGATGTAACA ACCCTTG 467 hqPGS_C08HBa0235H18.1-_SGN-E202224+ (12078 11612) ******************************************************************************** EST sequence 855 +strand 436 n (File: SGN-E206535+) 1 CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA CTCCGATAGG 61 CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA GGGGAACTAA 121 GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA GAGGTACATG 181 TCAGACTGGT GATTGTGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC CCCCAAACAC 241 CCTAGCCGAG TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA TTTCTTTAGT 301 CGATGGATTT AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG GAAAATGTCA 361 CGCAATTCAT TGCACGGCCA ATATAAATGG TGAATGTCCT CGCGCCCTTA AGGTACCTGG 421 AGGATGTAAC AACCCT Predicted gene structure (within gDNA segment 13144 to 10023): Exon 1 12049 11614 ( 436 n); cDNA 1 436 ( 436 n); score: 0.904 MATCH C08HBa0235H18.1- SGN-E206535+ 0.904 436 1.000 C PGS_C08HBa0235H18.1-_SGN-E206535+ (12049 11614) Alignment (genomic DNA sequence = upper lines): CACTTTCGAG GTACGCAACA ACTGTCCATA CACCGTCTGG GCGGCGTCGA CCCCAATAGG 11990 |||| | ||| |||||||||| |||||||||| |||||| ||| ||||| |||| | || ||||| CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA CTCCGATAGG 60 CGGTGGTCGA CGTCTTGATC GAGGCCAAAC ATGGGTCATC AATGCACCGA GGGGCACTAA 11930 |||||||||| ||||| ||| |||||||||| |||||||||| ||||| |||| |||| ||||| CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA GGGGAACTAA 120 GATGGCACGT ATATGGGGTC GTACGAATTG CAACTTTGAT GGTGCTGGTA GAGGTTCATG 11870 |||||||||| |||||||||| |||| ||| ||||||| || | ||| || | ||||| |||| GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA GAGGTACATG 180 TCAGACTGGT GATTGTGGTG GGGTCTTGCA ATGTACCGGG TGGGGCAAAC CACCAAACAC 11810 |||||||||| |||||||||| | ||||| || |||||||| |||||||||| | |||||||| TCAGACTGGT GATTGTGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC CCCCAAACAC 240 CCTGGCCGAG TACGCCTTGG ACCAGTTTAG CAACCTAGAT TTCTGGGACA TTTCTTTAGT 11750 ||| |||||| |||||||||| |||||||||| |||| ||||| || ||||||| |||||||||| CCTAGCCGAG TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA TTTCTTTAGT 300 CGATGGATTT AATATTCCAA TGACTTTCGC CCCGACCAAT CCTAGTGGAG GGAAATGCCA 11690 |||||||||| |||||||||| ||||||| || ||| || || |||||||||| | ||||| || CGATGGATTT AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG GAAAATGTCA 360 TGCAATTCAT TGTACGGCTA ATATAAATGG TGAATGTCCT GGTTCACTTA GGGTACCCGG 11630 ||||||||| || ||||| | |||||||||| |||||||||| | | |||| |||||| || CGCAATTCAT TGCACGGCCA ATATAAATGG TGAATGTCCT CGCGCCCTTA AGGTACCTGG 420 AGGATGTAAC AATCCT 11614 |||||||||| || ||| AGGATGTAAC AACCCT 436 hqPGS_C08HBa0235H18.1-_SGN-E206535+ (12049 11614) ******************************************************************************** EST sequence 915 +strand 502 n (File: SGN-E274566+) 1 CATGGCCTAC TAGACATCTT CTTTTGGTCT CTTCTTCCTT CTTTGGGTGA CTTATACTTA 61 TGCTGCCACT ATTGAGGTAC ACAACAACTG TCCATACACC GTTTGGGCGG CATCGACTCC 121 GATAGGCGGT GGTCGACGTC TCAATCGAGG CCAAACATGG GTCATCAATG CTCCGAGGGG 181 AACTAAGATG GCACGTATAT GGGGTCGGAC TGGTTGCAAC TTTAATGCTG CAGGCAGAGG 241 TACATGTCAC ACTGGTGATT GTGGTGGAGT CTTACAGTGT ACCGGATGGG GCAAACCCCC 301 AAACACCCTA GCCGAGTACG CCTTGGACCA GTTGAGCAAC TTACATTTTT GGGACATTAC 361 TTTAGCCGAT GGATTTAATA TTCCAATGAC TTTTGCCCCA ACAAAACCTA GTGGAAGGAA 421 AATGTCACGC AATTCATTGC ACGGCCAATA TAAATGGTGA ATGTCCTCGC GCCCTTAAGG 481 TACCTGGAGG ATGTAACAAC CC Predicted gene structure (within gDNA segment 13804 to 8349): Exon 1 12115 11615 ( 501 n); cDNA 1 502 ( 502 n); score: 0.875 MATCH C08HBa0235H18.1- SGN-E274566+ 0.875 501 0.998 C PGS_C08HBa0235H18.1-_SGN-E274566+ (12115 11615) Alignment (genomic DNA sequence = upper lines): CATGGCCTAC TTGAGATCTT CTTTTGTTTT CTTCCTTCTT GCTTTTGTGA CTTACACTTA 12056 |||||||||| | || ||||| |||||| | | |||| | ||| || |||| |||| ||||| CATGGCCTAC TAGACATCTT CTTTTGGTCT CTTCTTCCTT CTTTGGGTGA CTTATACTTA 60 TGCTGCCACT TTCGAGGTAC GCAACAACTG TCCATACACC GTCTGGGCGG CGTCGACCCC 11996 |||||||||| | ||||||| ||||||||| |||||||||| || ||||||| | ||||| || TGCTGCCACT ATTGAGGTAC ACAACAACTG TCCATACACC GTTTGGGCGG CATCGACTCC 120 AATAGGCGGT GGTCGACGTC TTGATCGAGG CCAAACATGG GTCATCAATG CACCGAGGGG 11936 ||||||||| |||||||||| | ||||||| |||||||||| |||||||||| | |||||||| GATAGGCGGT GGTCGACGTC TCAATCGAGG CCAAACATGG GTCATCAATG CTCCGAGGGG 180 CACTAAGATG GCACGTATAT GGGGTCGTAC GAATTGCAAC TTTGATGGTG CTGGTAGAGG 11876 ||||||||| |||||||||| ||||||| || ||||||| ||| ||| || | || ||||| AACTAAGATG GCACGTATAT GGGGTCGGAC TGGTTGCAAC TTTAATGCTG CAGGCAGAGG 240 TTCATGTCAG ACTGGTGATT GTGGTGGGGT CTTGCAATGT ACCGGGTGGG GCAAACCACC 11816 | ||||||| |||||||||| ||||||| || ||| || ||| ||||| |||| ||||||| || TACATGTCAC ACTGGTGATT GTGGTGGAGT CTTACAGTGT ACCGGATGGG GCAAACCCCC 300 AAACACCCTG GCCGAGTACG CCTTGGACCA GTTTAGCAAC CTAGATTTCT GGGACATTTC 11756 ||||||||| |||||||||| |||||||||| ||| |||||| || |||| | |||||||| | AAACACCCTA GCCGAGTACG CCTTGGACCA GTTGAGCAAC TTACATTTTT GGGACATTAC 360 TTTAGTCGAT GGATTTAATA TTCCAATGAC TTTCGCCCCG ACCAATCCTA GTGG-AGGGA 11697 ||||| |||| |||||||||| |||||||||| ||| ||||| || || |||| |||| ||| | TTTAGCCGAT GGATTTAATA TTCCAATGAC TTTTGCCCCA ACAAAACCTA GTGGAAGGAA 420 AATGCCATGC AATTCATTGT ACGGCTAATA TAAATGGTGA ATGTCCTGGT TCACTTAGGG 11637 |||| || || ||||||||| ||||| |||| |||||||||| ||||||| | | |||| || AATGTCACGC AATTCATTGC ACGGCCAATA TAAATGGTGA ATGTCCTCGC GCCCTTAAGG 480 TACCCGGAGG ATGTAACAAT CC 11615 |||| ||||| ||||||||| || TACCTGGAGG ATGTAACAAC CC 502 hqPGS_C08HBa0235H18.1-_SGN-E274566+ (12115 11615) ******************************************************************************** EST sequence 1204 +strand 487 n (File: SGN-E209259+) 1 CATCTTCTTT TGTTCTCTTC TTCCTTCTTT GTGTGACTTA TACTTATGCT GCCACTATTG 61 AGGTACGCAA CAACTGTCCA TACACCGTTT GGGCGGCATC GACTCCGATA GGCGGTGGTC 121 GACGTCTCAA TCGAGGCCAA ACATGGGTCA TCAATGCTCC GAGGGGAACT AAGATGGCAC 181 GTATATGGGG TCGTACTGGT TGCAACTTTA ATGCTGCAGG CAGAGGTACA TGTCAGACTG 241 GTGATTGTGG TGGAGTCTTA CAGTGTACCG GATGGGGCAA ACCCCCAAAC ACCCTAGCCG 301 AGTACGCCTT GGACCAGTTT AGCAACTTAG ATTTTTGGGA CATTTCTTTA GTCGATGGAT 361 TTAATATTCC AATGACTTTT GCCCCAACAA AACCTAGTGG AGGAAAATGT CACGCAATTC 421 ATTGCACGGC CAATATAAAT GGTGAATGTC CTCGCGCCCT TAAGGTACCT GGAGGATGTA 481 ACAACCC Predicted gene structure (within gDNA segment 13664 to 10033): Exon 1 12100 11615 ( 486 n); cDNA 2 487 ( 486 n); score: 0.899 MATCH C08HBa0235H18.1- SGN-E209259+ 0.899 486 0.998 C PGS_C08HBa0235H18.1-_SGN-E209259+ (12100 11615) Alignment (genomic DNA sequence = upper lines): ATCTTCTTTT GTTTTCTTCC TTCTTGCTTT TGTGACTTAC ACTTATGCTG CCACTTTCGA 12041 |||||||||| ||| ||||| | ||| || ||||||||| |||||||||| ||||| | || ATCTTCTTTT GTTCTCTTCT TCCTTCTTTG TGTGACTTAT ACTTATGCTG CCACTATTGA 61 GGTACGCAAC AACTGTCCAT ACACCGTCTG GGCGGCGTCG ACCCCAATAG GCGGTGGTCG 11981 |||||||||| |||||||||| ||||||| || |||||| ||| || || |||| |||||||||| GGTACGCAAC AACTGTCCAT ACACCGTTTG GGCGGCATCG ACTCCGATAG GCGGTGGTCG 121 ACGTCTTGAT CGAGGCCAAA CATGGGTCAT CAATGCACCG AGGGGCACTA AGATGGCACG 11921 |||||| || |||||||||| |||||||||| |||||| ||| ||||| |||| |||||||||| ACGTCTCAAT CGAGGCCAAA CATGGGTCAT CAATGCTCCG AGGGGAACTA AGATGGCACG 181 TATATGGGGT CGTACGAATT GCAACTTTGA TGGTGCTGGT AGAGGTTCAT GTCAGACTGG 11861 |||||||||| ||||| || |||||||| | || ||| || |||||| ||| |||||||||| TATATGGGGT CGTACTGGTT GCAACTTTAA TGCTGCAGGC AGAGGTACAT GTCAGACTGG 241 TGATTGTGGT GGGGTCTTGC AATGTACCGG GTGGGGCAAA CCACCAAACA CCCTGGCCGA 11801 |||||||||| || ||||| | | |||||||| ||||||||| || ||||||| |||| ||||| TGATTGTGGT GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAACA CCCTAGCCGA 301 GTACGCCTTG GACCAGTTTA GCAACCTAGA TTTCTGGGAC ATTTCTTTAG TCGATGGATT 11741 |||||||||| |||||||||| ||||| |||| ||| |||||| |||||||||| |||||||||| GTACGCCTTG GACCAGTTTA GCAACTTAGA TTTTTGGGAC ATTTCTTTAG TCGATGGATT 361 TAATATTCCA ATGACTTTCG CCCCGACCAA TCCTAGTGGA GGGAAATGCC ATGCAATTCA 11681 |||||||||| |||||||| | |||| || || ||||||||| || ||||| | | |||||||| TAATATTCCA ATGACTTTTG CCCCAACAAA ACCTAGTGGA GGAAAATGTC ACGCAATTCA 421 TTGTACGGCT AATATAAATG GTGAATGTCC TGGTTCACTT AGGGTACCCG GAGGATGTAA 11621 ||| ||||| |||||||||| |||||||||| | | | ||| | |||||| | |||||||||| TTGCACGGCC AATATAAATG GTGAATGTCC TCGCGCCCTT AAGGTACCTG GAGGATGTAA 481 CAATCC 11615 ||| || CAACCC 487 hqPGS_C08HBa0235H18.1-_SGN-E209259+ (12100 11615) ******************************************************************************** EST sequence 948 +strand 513 n (File: SGN-E207077+) 1 AATAGTTCCA CAAACATGGC CTACTTGAGA TCTTCTTTTG TTTTCTTCCT TCTTGCTTTT 61 GTGACTTACA CTTATGCTGC CACTTTCGAG GTACGCAACA ACTGTCCATA CACCGTCTGG 121 GCGGCGTCGA CCCCAATAGG CGGTGGTCGA CGTCTTGATC GAGGCCAAAC ATGGGTCATC 181 AATGCACCGA GGGGCACTAA GATGGCACGT ATATGGGGTC GTACGAATTG CAACTTTGAT 241 GGTGCTGGTA GAGGTTCATG TCAGACTGGT GATTGTGGTG GGGTCTTGCA ATGTACCGGG 301 TGGGGCAAAC CACCAAACAC CCTGGCCGAG TACGCCTTGG ACCAGTTTAG CAACCTAGAT 361 TTCTGGGACA TTTCTTTAGT CGATGGATTT AATATTCCAA TGACTTTCGC CCCGACCAAT 421 CCTAGTGGAG GGAAATGCCA TGCAATTCAT TGTACGGCTA ATATAAATGG TGAATGTCCT 481 GGTTCACNTT AGGGTACCCG GAGATGTAAC AAT Predicted gene structure (within gDNA segment 12729 to 10773): Exon 1 12129 11617 ( 513 n); cDNA 1 513 ( 513 n); score: 0.993 MATCH C08HBa0235H18.1- SGN-E207077+ 0.993 513 1.000 C PGS_C08HBa0235H18.1-_SGN-E207077+ (12129 11617) Alignment (genomic DNA sequence = upper lines): AATAGTTCCA CAAACATGGC CTACTTGAGA TCTTCTTTTG TTTTCTTCCT TCTTGCTTTT 12070 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATAGTTCCA CAAACATGGC CTACTTGAGA TCTTCTTTTG TTTTCTTCCT TCTTGCTTTT 60 GTGACTTACA CTTATGCTGC CACTTTCGAG GTACGCAACA ACTGTCCATA CACCGTCTGG 12010 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGACTTACA CTTATGCTGC CACTTTCGAG GTACGCAACA ACTGTCCATA CACCGTCTGG 120 GCGGCGTCGA CCCCAATAGG CGGTGGTCGA CGTCTTGATC GAGGCCAAAC ATGGGTCATC 11950 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGGCGTCGA CCCCAATAGG CGGTGGTCGA CGTCTTGATC GAGGCCAAAC ATGGGTCATC 180 AATGCACCGA GGGGCACTAA GATGGCACGT ATATGGGGTC GTACGAATTG CAACTTTGAT 11890 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGCACCGA GGGGCACTAA GATGGCACGT ATATGGGGTC GTACGAATTG CAACTTTGAT 240 GGTGCTGGTA GAGGTTCATG TCAGACTGGT GATTGTGGTG GGGTCTTGCA ATGTACCGGG 11830 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGCTGGTA GAGGTTCATG TCAGACTGGT GATTGTGGTG GGGTCTTGCA ATGTACCGGG 300 TGGGGCAAAC CACCAAACAC CCTGGCCGAG TACGCCTTGG ACCAGTTTAG CAACCTAGAT 11770 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGGGCAAAC CACCAAACAC CCTGGCCGAG TACGCCTTGG ACCAGTTTAG CAACCTAGAT 360 TTCTGGGACA TTTCTTTAGT CGATGGATTT AATATTCCAA TGACTTTCGC CCCGACCAAT 11710 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTGGGACA TTTCTTTAGT CGATGGATTT AATATTCCAA TGACTTTCGC CCCGACCAAT 420 CCTAGTGGAG GGAAATGCCA TGCAATTCAT TGTACGGCTA ATATAAATGG TGAATGTCCT 11650 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTAGTGGAG GGAAATGCCA TGCAATTCAT TGTACGGCTA ATATAAATGG TGAATGTCCT 480 GGTTCAC-TT AGGGTACCCG GAGGATGTAA CAAT 11617 ||||||| || |||||||||| || ||||||| |||| GGTTCACNTT AGGGTACCCG GA-GATGTAA CAAT 513 hqPGS_C08HBa0235H18.1-_SGN-E207077+ (12129 11617) ******************************************************************************** EST sequence 827 +strand 493 n (File: SGN-E205594+) 1 CTACTTGACA TCTTCTTTTG TTCTCTTCTT CCTTCTTTGT GTGACTGGTG CTTATGCTGC 61 CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCAA CTCCGATAGG 121 CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA GGGGAACTAA 181 GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA GAGGTACATG 241 TCAGACTGGT GATTGTGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC CCCCAAACAC 301 CCTAGCCGAG TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA TTTCTTTAGT 361 CGATGGATTT AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAATGGAG GAAAATGTCA 421 CGCAATTCAT TGCACGGCCA ATATAAATGG TGAATGTCCT CGCGCCCTTA AGGTACCTGG 481 AGGATGTAAC AAC Predicted gene structure (within gDNA segment 13744 to 8406): Exon 1 12109 11618 ( 492 n); cDNA 1 492 ( 492 n); score: 0.890 MATCH C08HBa0235H18.1- SGN-E205594+ 0.890 492 0.998 C PGS_C08HBa0235H18.1-_SGN-E205594+ (12109 11618) Alignment (genomic DNA sequence = upper lines): CTACTTGAGA TCTTCTTTTG TTTTCTTCCT TCTTGCTTTT GTGACTTACA CTTATGCTGC 12050 |||||||| | |||||||||| || ||||| | ||| || | |||||| |||||||||| CTACTTGACA TCTTCTTTTG TTCTCTTCTT CCTTCTTTGT GTGACTGGTG CTTATGCTGC 60 CACTTTCGAG GTACGCAACA ACTGTCCATA CACCGTCTGG GCGGCGTCGA CCCCAATAGG 11990 |||| | ||| |||||||||| |||||||||| |||||| ||| ||||| || | | || ||||| CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCAA CTCCGATAGG 120 CGGTGGTCGA CGTCTTGATC GAGGCCAAAC ATGGGTCATC AATGCACCGA GGGGCACTAA 11930 |||||||||| ||||| ||| |||||||||| |||||||||| ||||| |||| |||| ||||| CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA GGGGAACTAA 180 GATGGCACGT ATATGGGGTC GTACGAATTG CAACTTTGAT GGTGCTGGTA GAGGTTCATG 11870 |||||||||| |||||||||| |||| ||| ||||||| || | ||| || | ||||| |||| GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA GAGGTACATG 240 TCAGACTGGT GATTGTGGTG GGGTCTTGCA ATGTACCGGG TGGGGCAAAC CACCAAACAC 11810 |||||||||| |||||||||| | ||||| || |||||||| |||||||||| | |||||||| TCAGACTGGT GATTGTGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC CCCCAAACAC 300 CCTGGCCGAG TACGCCTTGG ACCAGTTTAG CAACCTAGAT TTCTGGGACA TTTCTTTAGT 11750 ||| |||||| |||||||||| |||||||||| |||| ||||| || ||||||| |||||||||| CCTAGCCGAG TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA TTTCTTTAGT 360 CGATGGATTT AATATTCCAA TGACTTTCGC CCCGACCAAT CCTAGTGGAG GGAAATGCCA 11690 |||||||||| |||||||||| ||||||| || ||| || || |||| ||||| | ||||| || CGATGGATTT AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAATGGAG GAAAATGTCA 420 TGCAATTCAT TGTACGGCTA ATATAAATGG TGAATGTCCT GGTTCACTTA GGGTACCCGG 11630 ||||||||| || ||||| | |||||||||| |||||||||| | | |||| |||||| || CGCAATTCAT TGCACGGCCA ATATAAATGG TGAATGTCCT CGCGCCCTTA AGGTACCTGG 480 AGGATGTAAC AA 11618 |||||||||| || AGGATGTAAC AA 492 hqPGS_C08HBa0235H18.1-_SGN-E205594+ (12109 11618) ******************************************************************************** EST sequence 889 +strand 455 n (File: SGN-E205290+) 1 GTGTGACTTA TACTTATGCT GCCACTATTG AGGTACGCAA CAACTGTGGA TACACCGTTT 61 GGGCGGCATC GACTCCGATA GGCGGTGGTC GACGTCTCAA TCGAGGCCAA ACATGGGTCA 121 TCAATGCTCC GAGGGGAACT AAGATGGCAC GTATATGGGG TCGTACTGGT TGCAACTTTA 181 ATGCTGCAGG CAGAGGTACA TGTCAGACTG GTGATTGTGG TGGAGTCTTA CAGTGTACCG 241 GATGGGGCAA ACCCCCAAAC ACCCTAGCCG AGTACGCCTT GGACCAGTTT AGCAACTTAG 301 ATTTTTGGGA CATTTCTTTA GTCGATGGAT TTAATATTCC AATGACTTTT GCCCCAACAA 361 AACCTAGTGG AGGAAAATGT CACGCAATTC ATTGCACGGC CAATATAAAT GGTGAATGTC 421 CTCGCGCCCT TAAGGTACCT GGAGGATGTA ACAAC Predicted gene structure (within gDNA segment 13364 to 10053): Exon 1 12070 11618 ( 453 n); cDNA 2 454 ( 453 n); score: 0.903 MATCH C08HBa0235H18.1- SGN-E205290+ 0.903 453 0.996 C PGS_C08HBa0235H18.1-_SGN-E205290+ (12070 11618) Alignment (genomic DNA sequence = upper lines): TGTGACTTAC ACTTATGCTG CCACTTTCGA GGTACGCAAC AACTGTCCAT ACACCGTCTG 12011 ||||||||| |||||||||| ||||| | || |||||||||| |||||| || ||||||| || TGTGACTTAT ACTTATGCTG CCACTATTGA GGTACGCAAC AACTGTGGAT ACACCGTTTG 61 GGCGGCGTCG ACCCCAATAG GCGGTGGTCG ACGTCTTGAT CGAGGCCAAA CATGGGTCAT 11951 |||||| ||| || || |||| |||||||||| |||||| || |||||||||| |||||||||| GGCGGCATCG ACTCCGATAG GCGGTGGTCG ACGTCTCAAT CGAGGCCAAA CATGGGTCAT 121 CAATGCACCG AGGGGCACTA AGATGGCACG TATATGGGGT CGTACGAATT GCAACTTTGA 11891 |||||| ||| ||||| |||| |||||||||| |||||||||| ||||| || |||||||| | CAATGCTCCG AGGGGAACTA AGATGGCACG TATATGGGGT CGTACTGGTT GCAACTTTAA 181 TGGTGCTGGT AGAGGTTCAT GTCAGACTGG TGATTGTGGT GGGGTCTTGC AATGTACCGG 11831 || ||| || |||||| ||| |||||||||| |||||||||| || ||||| | | |||||||| TGCTGCAGGC AGAGGTACAT GTCAGACTGG TGATTGTGGT GGAGTCTTAC AGTGTACCGG 241 GTGGGGCAAA CCACCAAACA CCCTGGCCGA GTACGCCTTG GACCAGTTTA GCAACCTAGA 11771 ||||||||| || ||||||| |||| ||||| |||||||||| |||||||||| ||||| |||| ATGGGGCAAA CCCCCAAACA CCCTAGCCGA GTACGCCTTG GACCAGTTTA GCAACTTAGA 301 TTTCTGGGAC ATTTCTTTAG TCGATGGATT TAATATTCCA ATGACTTTCG CCCCGACCAA 11711 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||| | |||| || || TTTTTGGGAC ATTTCTTTAG TCGATGGATT TAATATTCCA ATGACTTTTG CCCCAACAAA 361 TCCTAGTGGA GGGAAATGCC ATGCAATTCA TTGTACGGCT AATATAAATG GTGAATGTCC 11651 ||||||||| || ||||| | | |||||||| ||| ||||| |||||||||| |||||||||| ACCTAGTGGA GGAAAATGTC ACGCAATTCA TTGCACGGCC AATATAAATG GTGAATGTCC 421 TGGTTCACTT AGGGTACCCG GAGGATGTAA CAA 11618 | | | ||| | |||||| | |||||||||| ||| TCGCGCCCTT AAGGTACCTG GAGGATGTAA CAA 454 hqPGS_C08HBa0235H18.1-_SGN-E205290+ (12070 11618) ******************************************************************************** EST sequence 509 +strand 474 n (File: SGN-E250954+) 1 TTTGTTCTCT TCTTCCTTCT TTGTGTGACT TATACTTACT ATCGCACTAT TGAGGTACGC 61 AACAACTGTC CATACACCGT TTGGGCGGCA TCGACTCCGA TAGGCGGTGG TCGACGTCTC 121 AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC ACGTATATGG 181 GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC TGGTGATTGT 241 GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC CGAGTACGCC 301 TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG ATTTAATATT 361 CCAATGACTT TTGCCCCAAC AAAACCTAGT GGAGGAAAAT GTCACGCAAT TCATTGCACG 421 GCCAATATAA ATGGTGAATG TCCTCGCGCC CTTAAGGTAC CTGGAGGATG TAAA Predicted gene structure (within gDNA segment 13584 to 10083): Exon 1 12093 11621 ( 473 n); cDNA 1 473 ( 473 n); score: 0.888 MATCH C08HBa0235H18.1- SGN-E250954+ 0.888 473 0.998 C PGS_C08HBa0235H18.1-_SGN-E250954+ (12093 11621) Alignment (genomic DNA sequence = upper lines): TTTGTTTTCT TCCTTCTTGC TTTTGTGACT TACACTTATG CTGCCACTTT CGAGGTACGC 12034 |||||| ||| || | ||| || ||||||| || ||||| | |||| | ||||||||| TTTGTTCTCT TCTTCCTTCT TTGTGTGACT TATACTTACT ATCGCACTAT TGAGGTACGC 60 AACAACTGTC CATACACCGT CTGGGCGGCG TCGACCCCAA TAGGCGGTGG TCGACGTCTT 11974 |||||||||| |||||||||| |||||||| ||||| || | |||||||||| ||||||||| AACAACTGTC CATACACCGT TTGGGCGGCA TCGACTCCGA TAGGCGGTGG TCGACGTCTC 120 GATCGAGGCC AAACATGGGT CATCAATGCA CCGAGGGGCA CTAAGATGGC ACGTATATGG 11914 ||||||||| |||||||||| ||||||||| |||||||| | |||||||||| |||||||||| AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC ACGTATATGG 180 GGTCGTACGA ATTGCAACTT TGATGGTGCT GGTAGAGGTT CATGTCAGAC TGGTGATTGT 11854 |||||||| ||||||||| | ||| ||| || |||||| |||||||||| |||||||||| GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC TGGTGATTGT 240 GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA ACACCCTGGC CGAGTACGCC 11794 ||||| |||| | || ||||| ||| |||||| ||||| |||| ||||||| || |||||||||| GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC CGAGTACGCC 300 TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG ATTTAATATT 11734 |||||||||| |||||||| | |||||| ||| |||||||||| |||||||||| |||||||||| TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG ATTTAATATT 360 CCAATGACTT TCGCCCCGAC CAATCCTAGT GGAGGGAAAT GCCATGCAAT TCATTGTACG 11674 |||||||||| | ||||| || || |||||| ||||| |||| | || ||||| |||||| ||| CCAATGACTT TTGCCCCAAC AAAACCTAGT GGAGGAAAAT GTCACGCAAT TCATTGCACG 420 GCTAATATAA ATGGTGAATG TCCTGGTTCA CTTAGGGTAC CCGGAGGATG TAA 11621 || ||||||| |||||||||| |||| | | |||| ||||| | |||||||| ||| GCCAATATAA ATGGTGAATG TCCTCGCGCC CTTAAGGTAC CTGGAGGATG TAA 473 hqPGS_C08HBa0235H18.1-_SGN-E250954+ (12093 11621) ******************************************************************************** EST sequence 566 +strand 391 n (File: SGN-E201143+) 1 AACTGTCCAT ACACCGCTTG GGCGGCATCG ACTCCGATAG GCGGTGGTCG ACGTCTCAAT 61 CGAGGCCAAA CATGGGTCAT CAATGCTCCG AGGGGAACTA AGATGGCACG TATATGGGGT 121 CGTACTGGTT GCAACTTTAA TGCTGCAGGC AGAGGTACAT GTCAGACTGG TGATTGTGGT 181 GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAACA CCCTAGCCGA GTACGCCTTG 241 GACCAGTTTA GCAACTTAGA TTTTTGGGAC ATTTCTTTAG TCGATGGATT TAATATTCCA 301 ATGACTTTTG CCCCAACAAA ACCTAGTGGA GGAAAATGTC ACGCAATTCA TTGCACGGCC 361 AATATAAATG GTGAATGTCC TCGCGCCCTT A Predicted gene structure (within gDNA segment 12954 to 10283): Exon 1 12030 11640 ( 391 n); cDNA 1 391 ( 391 n); score: 0.903 MATCH C08HBa0235H18.1- SGN-E201143+ 0.903 391 1.000 C PGS_C08HBa0235H18.1-_SGN-E201143+ (12030 11640) Alignment (genomic DNA sequence = upper lines): AACTGTCCAT ACACCGTCTG GGCGGCGTCG ACCCCAATAG GCGGTGGTCG ACGTCTTGAT 11971 |||||||||| |||||| || |||||| ||| || || |||| |||||||||| |||||| || AACTGTCCAT ACACCGCTTG GGCGGCATCG ACTCCGATAG GCGGTGGTCG ACGTCTCAAT 60 CGAGGCCAAA CATGGGTCAT CAATGCACCG AGGGGCACTA AGATGGCACG TATATGGGGT 11911 |||||||||| |||||||||| |||||| ||| ||||| |||| |||||||||| |||||||||| CGAGGCCAAA CATGGGTCAT CAATGCTCCG AGGGGAACTA AGATGGCACG TATATGGGGT 120 CGTACGAATT GCAACTTTGA TGGTGCTGGT AGAGGTTCAT GTCAGACTGG TGATTGTGGT 11851 ||||| || |||||||| | || ||| || |||||| ||| |||||||||| |||||||||| CGTACTGGTT GCAACTTTAA TGCTGCAGGC AGAGGTACAT GTCAGACTGG TGATTGTGGT 180 GGGGTCTTGC AATGTACCGG GTGGGGCAAA CCACCAAACA CCCTGGCCGA GTACGCCTTG 11791 || ||||| | | |||||||| ||||||||| || ||||||| |||| ||||| |||||||||| GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAACA CCCTAGCCGA GTACGCCTTG 240 GACCAGTTTA GCAACCTAGA TTTCTGGGAC ATTTCTTTAG TCGATGGATT TAATATTCCA 11731 |||||||||| ||||| |||| ||| |||||| |||||||||| |||||||||| |||||||||| GACCAGTTTA GCAACTTAGA TTTTTGGGAC ATTTCTTTAG TCGATGGATT TAATATTCCA 300 ATGACTTTCG CCCCGACCAA TCCTAGTGGA GGGAAATGCC ATGCAATTCA TTGTACGGCT 11671 |||||||| | |||| || || ||||||||| || ||||| | | |||||||| ||| ||||| ATGACTTTTG CCCCAACAAA ACCTAGTGGA GGAAAATGTC ACGCAATTCA TTGCACGGCC 360 AATATAAATG GTGAATGTCC TGGTTCACTT A 11640 |||||||||| |||||||||| | | | ||| | AATATAAATG GTGAATGTCC TCGCGCCCTT A 391 hqPGS_C08HBa0235H18.1-_SGN-E201143+ (12030 11640) ******************************************************************************** EST sequence 733 +strand 491 n (File: SGN-E205046+) 1 AAAATAGTTC CACAAACATG GCCTACTTGA GATCTTCTGT TGTTTTCTTC CTTCTTGCTT 61 TTGTGACTTA CACTTATGCT GCCACTTTCG AGGTACGCAA CAACTGTCCA TACACCGTCT 121 GGGCGGCGTC GACCCCAATA GGCGGTGGTC GACGTCTTGA TCGAGGCCAA ACATGGGTCA 181 TCAATGCACC GAGGGGCACT AAGATGGCAC GTATATGGGG TCGTACGAAT TGCAACTTTG 241 ATGGTGCTGG TAGAGGTTCA TGTCAGACTG GTGATTGTGG TGGGGTCTTG CAATGTACCG 301 GGTGGGGCAA ACCACCAAAC ACCCTGGCCG AGTACGCCTT GGACCAGTTT AGCAACCTAG 361 ATTTCTGGGA CATTTCTTTA GTCGATGGAT TTAATATTCC AATGACTTTC GCCCCGACCA 421 ATCCTAGTGG AGGGAAATGC CATGCAATTC ATTGTACGGC TAATATAAAT GGTGAATGTC 481 CTGGTTCACT T Predicted gene structure (within gDNA segment 12731 to 11031): Exon 1 12131 11641 ( 491 n); cDNA 1 491 ( 491 n); score: 0.998 MATCH C08HBa0235H18.1- SGN-E205046+ 0.998 491 1.000 C PGS_C08HBa0235H18.1-_SGN-E205046+ (12131 11641) Alignment (genomic DNA sequence = upper lines): AAAATAGTTC CACAAACATG GCCTACTTGA GATCTTCTTT TGTTTTCTTC CTTCTTGCTT 12072 |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| AAAATAGTTC CACAAACATG GCCTACTTGA GATCTTCTGT TGTTTTCTTC CTTCTTGCTT 60 TTGTGACTTA CACTTATGCT GCCACTTTCG AGGTACGCAA CAACTGTCCA TACACCGTCT 12012 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTGACTTA CACTTATGCT GCCACTTTCG AGGTACGCAA CAACTGTCCA TACACCGTCT 120 GGGCGGCGTC GACCCCAATA GGCGGTGGTC GACGTCTTGA TCGAGGCCAA ACATGGGTCA 11952 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGCGGCGTC GACCCCAATA GGCGGTGGTC GACGTCTTGA TCGAGGCCAA ACATGGGTCA 180 TCAATGCACC GAGGGGCACT AAGATGGCAC GTATATGGGG TCGTACGAAT TGCAACTTTG 11892 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAATGCACC GAGGGGCACT AAGATGGCAC GTATATGGGG TCGTACGAAT TGCAACTTTG 240 ATGGTGCTGG TAGAGGTTCA TGTCAGACTG GTGATTGTGG TGGGGTCTTG CAATGTACCG 11832 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGTGCTGG TAGAGGTTCA TGTCAGACTG GTGATTGTGG TGGGGTCTTG CAATGTACCG 300 GGTGGGGCAA ACCACCAAAC ACCCTGGCCG AGTACGCCTT GGACCAGTTT AGCAACCTAG 11772 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGGGGCAA ACCACCAAAC ACCCTGGCCG AGTACGCCTT GGACCAGTTT AGCAACCTAG 360 ATTTCTGGGA CATTTCTTTA GTCGATGGAT TTAATATTCC AATGACTTTC GCCCCGACCA 11712 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTCTGGGA CATTTCTTTA GTCGATGGAT TTAATATTCC AATGACTTTC GCCCCGACCA 420 ATCCTAGTGG AGGGAAATGC CATGCAATTC ATTGTACGGC TAATATAAAT GGTGAATGTC 11652 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCCTAGTGG AGGGAAATGC CATGCAATTC ATTGTACGGC TAATATAAAT GGTGAATGTC 480 CTGGTTCACT T 11641 |||||||||| | CTGGTTCACT T 491 hqPGS_C08HBa0235H18.1-_SGN-E205046+ (12131 11641) ******************************************************************************** EST sequence 818 +strand 477 n (File: SGN-E202164+) 1 AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 61 TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 121 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 181 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 241 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 301 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 361 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 421 AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCT Predicted gene structure (within gDNA segment 13834 to 10303): Exon 1 12118 11642 ( 477 n); cDNA 1 477 ( 477 n); score: 0.899 MATCH C08HBa0235H18.1- SGN-E202164+ 0.899 477 1.000 C PGS_C08HBa0235H18.1-_SGN-E202164+ (12118 11642) Alignment (genomic DNA sequence = upper lines): AAACATGGCC TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG TGACTTACAC 12059 |||||||| | ||||||| || |||||||||| | ||||| | ||| || || ||||||| || AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 60 TTATGCTGCC ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG CGGCGTCGAC 11999 |||||||||| ||| | |||| |||||||||| |||||||||| ||||| |||| |||| ||||| TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 120 CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG 11939 || |||||| |||||||||| |||| |||| |||||||||| |||||||||| |||| ||||| TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 180 GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG 11879 ||| |||||| |||||||||| |||||||||| ||| |||| |||||| ||| ||| || || GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 240 AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC 11819 |||| ||||| |||||||||| |||||||||| ||||| || |||||||| | |||||||||| AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 300 ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT 11759 ||||||||| || ||||||| |||||||||| |||||||||| ||| |||||| | |||||||| CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 360 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG 11699 |||||||||| |||||||||| |||||||||| |||||| ||| || || || | |||||||||| TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 420 GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACT 11642 ||||| || |||||||||| | ||||| || |||||||||| ||||||||| | | || AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCT 477 hqPGS_C08HBa0235H18.1-_SGN-E202164+ (12118 11642) ******************************************************************************** EST sequence 607 +strand 463 n (File: SGN-E264072+) 1 TGACATCTTC TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 61 TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 121 GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 181 CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 241 CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 301 CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG 361 GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 421 TTCATTGCAC GGCCAATATA AATGGTGAAT GTCCTCGCGC CCT Predicted gene structure (within gDNA segment 13694 to 10303): Exon 1 12104 11642 ( 463 n); cDNA 1 463 ( 463 n); score: 0.898 MATCH C08HBa0235H18.1- SGN-E264072+ 0.898 463 1.000 C PGS_C08HBa0235H18.1-_SGN-E264072+ (12104 11642) Alignment (genomic DNA sequence = upper lines): TGAGATCTTC TTTTGTTTTC TTCCTTCTTG CTTTTGTGAC TTACACTTAT GCTGCCACTT 12045 ||| |||||| ||||||| || ||| | ||| || |||||| ||| |||||| ||||||||| TGACATCTTC TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 60 TCGAGGTACG CAACAACTGT CCATACACCG TCTGGGCGGC GTCGACCCCA ATAGGCGGTG 11985 | |||||||| |||||||||| |||||||||| | |||||||| ||||| || |||||||||| TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 120 GTCGACGTCT TGATCGAGGC CAAACATGGG TCATCAATGC ACCGAGGGGC ACTAAGATGG 11925 |||||||||| |||||||| |||||||||| |||||||||| |||||||| |||||||||| GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 180 CACGTATATG GGGTCGTACG AATTGCAACT TTGATGGTGC TGGTAGAGGT TCATGTCAGA 11865 |||||||||| ||||||||| |||||||| || ||| ||| || |||||| ||||||||| CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 240 CTGGTGATTG TGGTGGGGTC TTGCAATGTA CCGGGTGGGG CAAACCACCA AACACCCTGG 11805 |||||||||| |||||| ||| || || |||| |||| ||||| |||||| ||| |||||||| | CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 300 CCGAGTACGC CTTGGACCAG TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG 11745 |||||||||| |||||||||| ||||||||| ||||||| || |||||||||| |||||||||| CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG 360 GATTTAATAT TCCAATGACT TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA 11685 |||||||||| |||||||||| || ||||| | | || ||||| |||||| ||| || || |||| GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 420 TTCATTGTAC GGCTAATATA AATGGTGAAT GTCCTGGTTC ACT 11642 ||||||| || ||| |||||| |||||||||| ||||| | | || TTCATTGCAC GGCCAATATA AATGGTGAAT GTCCTCGCGC CCT 463 hqPGS_C08HBa0235H18.1-_SGN-E264072+ (12104 11642) ******************************************************************************** EST sequence 548 +strand 477 n (File: SGN-E202521+) 1 ATAGTTCCAC AAACATGGCC TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG 61 TGACTTACAC TTATGCTGCC ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG 121 CGGCGTCGAC CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA 181 ATGCACCGAG GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG 241 GTGCTGGTAG AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT 301 GGGGCAAACC ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT 361 TCTGGGACAT TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC 421 CTAGTGGAGG GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTC Predicted gene structure (within gDNA segment 12728 to 11042): Exon 1 12128 11652 ( 477 n); cDNA 1 477 ( 477 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E202521+ 1.000 477 1.000 C PGS_C08HBa0235H18.1-_SGN-E202521+ (12128 11652) Alignment (genomic DNA sequence = upper lines): ATAGTTCCAC AAACATGGCC TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG 12069 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGTTCCAC AAACATGGCC TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG 60 TGACTTACAC TTATGCTGCC ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG 12009 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACTTACAC TTATGCTGCC ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG 120 CGGCGTCGAC CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA 11949 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGCGTCGAC CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA 180 ATGCACCGAG GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG 11889 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGCACCGAG GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG 240 GTGCTGGTAG AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT 11829 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGCTGGTAG AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT 300 GGGGCAAACC ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT 11769 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGGCAAACC ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT 360 TCTGGGACAT TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC 11709 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTGGGACAT TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC 420 CTAGTGGAGG GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTC 11652 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| CTAGTGGAGG GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTC 477 hqPGS_C08HBa0235H18.1-_SGN-E202521+ (12128 11652) ******************************************************************************** EST sequence 835 +strand 447 n (File: SGN-E203940+) 1 TCTTCTTTTG CTCTCTTCTT CCTTGTTTGT GTGACTTATA CTTATGCTGC CACTATTGAA 61 GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA CTCCGATAGG CGGTGGTCGA 121 CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA GGGGAACTAA GATGGCACGT 181 ATATGGGGTC GTACTGGATG CAACTTTAAT GCTGCAGGCA GAGGTACATG TCAGACTGGT 241 GATTGCGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC CCCCAAACAC CCTAGCCGAG 301 TACACCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA TTTCTTTAGT CGATGGATTT 361 AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG GAAAATGTCA CGCAATTCAT 421 TGCACGGTCA ATATAAATGG TGAATGT Predicted gene structure (within gDNA segment 13644 to 10413): Exon 1 12099 11653 ( 447 n); cDNA 1 447 ( 447 n); score: 0.895 MATCH C08HBa0235H18.1- SGN-E203940+ 0.895 447 1.000 C PGS_C08HBa0235H18.1-_SGN-E203940+ (12099 11653) Alignment (genomic DNA sequence = upper lines): TCTTCTTTTG TTTTCTTCCT TCTTGCTTTT GTGACTTACA CTTATGCTGC CACTTTCGAG 12040 |||||||||| | ||||| | |||| || | |||||||| | |||||||||| |||| | || TCTTCTTTTG CTCTCTTCTT CCTTGTTTGT GTGACTTATA CTTATGCTGC CACTATTGAA 60 GTACGCAACA ACTGTCCATA CACCGTCTGG GCGGCGTCGA CCCCAATAGG CGGTGGTCGA 11980 |||||||||| |||||||||| |||||| ||| ||||| |||| | || ||||| |||||||||| GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA CTCCGATAGG CGGTGGTCGA 120 CGTCTTGATC GAGGCCAAAC ATGGGTCATC AATGCACCGA GGGGCACTAA GATGGCACGT 11920 ||||| ||| |||||||||| |||||||||| ||||| |||| |||| ||||| |||||||||| CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA GGGGAACTAA GATGGCACGT 180 ATATGGGGTC GTACGAATTG CAACTTTGAT GGTGCTGGTA GAGGTTCATG TCAGACTGGT 11860 |||||||||| |||| || ||||||| || | ||| || | ||||| |||| |||||||||| ATATGGGGTC GTACTGGATG CAACTTTAAT GCTGCAGGCA GAGGTACATG TCAGACTGGT 240 GATTGTGGTG GGGTCTTGCA ATGTACCGGG TGGGGCAAAC CACCAAACAC CCTGGCCGAG 11800 ||||| |||| | ||||| || |||||||| |||||||||| | |||||||| ||| |||||| GATTGCGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC CCCCAAACAC CCTAGCCGAG 300 TACGCCTTGG ACCAGTTTAG CAACCTAGAT TTCTGGGACA TTTCTTTAGT CGATGGATTT 11740 ||| |||||| |||||||||| |||| ||||| || ||||||| |||||||||| |||||||||| TACACCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA TTTCTTTAGT CGATGGATTT 360 AATATTCCAA TGACTTTCGC CCCGACCAAT CCTAGTGGAG GGAAATGCCA TGCAATTCAT 11680 |||||||||| ||||||| || ||| || || |||||||||| | ||||| || ||||||||| AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG GAAAATGTCA CGCAATTCAT 420 TGTACGGCTA ATATAAATGG TGAATGT 11653 || |||| | |||||||||| ||||||| TGCACGGTCA ATATAAATGG TGAATGT 447 hqPGS_C08HBa0235H18.1-_SGN-E203940+ (12099 11653) ******************************************************************************** EST sequence 705 +strand 421 n (File: SGN-E205056+) 1 TTCCTTCTTT GTGTGACTTA TACTTATGCT GCCACTATTG AGGTACGCAA CAACTGTCCA 61 TACACCGTTT GGGCGGCATC GACTCCGATA GGCGGTGGTC GACGTCTCAA TCGAGGCCAA 121 ACATGGGTCA TCAATGCTCC GAGGGGAACT AAGATGGCAC GTATATGGGG TCGTACTGGT 181 TGCAACTTTA ATGCTGCAGG CAGAGGTACA TGTCAGACTG GTGATTGTGG TGGAGTCTTA 241 CAGTGTACCG GATGGGGCAA ACCCCCAAAC ACCCTAGCCG AGTACGCCTT GGACCAGTTT 301 AGCAACTTAG ATTTTTGGGA CATTTCTTTA GTCGATGGAT TTAATATTCC AATGACTTTT 361 GCCCCAACAA AACCTAGTGG AGGAAAATGT CACGCAATTC ATTGCACGGC CAATATAAAT 421 G Predicted gene structure (within gDNA segment 13464 to 10493): Exon 1 12078 11661 ( 418 n); cDNA 4 421 ( 418 n); score: 0.907 MATCH C08HBa0235H18.1- SGN-E205056+ 0.907 418 0.993 C PGS_C08HBa0235H18.1-_SGN-E205056+ (12078 11661) Alignment (genomic DNA sequence = upper lines): CTTGCTTTTG TGACTTACAC TTATGCTGCC ACTTTCGAGG TACGCAACAA CTGTCCATAC 12019 ||| || || ||||||| || |||||||||| ||| | |||| |||||||||| |||||||||| CTTCTTTGTG TGACTTATAC TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC 63 ACCGTCTGGG CGGCGTCGAC CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA 11959 ||||| |||| |||| ||||| || |||||| |||||||||| |||| |||| |||||||||| ACCGTTTGGG CGGCATCGAC TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA 123 TGGGTCATCA ATGCACCGAG GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC 11899 |||||||||| |||| ||||| ||| |||||| |||||||||| |||||||||| ||| |||| TGGGTCATCA ATGCTCCGAG GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC 183 AACTTTGATG GTGCTGGTAG AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA 11839 |||||| ||| ||| || || |||| ||||| |||||||||| |||||||||| ||||| || AACTTTAATG CTGCAGGCAG AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG 243 TGTACCGGGT GGGGCAAACC ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC 11779 |||||||| | |||||||||| ||||||||| || ||||||| |||||||||| |||||||||| TGTACCGGAT GGGGCAAACC CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC 303 AACCTAGATT TCTGGGACAT TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC 11719 ||| |||||| | |||||||| |||||||||| |||||||||| |||||||||| |||||| ||| AACTTAGATT TTTGGGACAT TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC 363 CCGACCAATC CTAGTGGAGG GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAATG 11661 || || || | |||||||||| ||||| || |||||||||| | ||||| || |||||||| CCAACAAAAC CTAGTGGAGG AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATG 421 hqPGS_C08HBa0235H18.1-_SGN-E205056+ (12078 11661) ******************************************************************************** EST sequence 955 +strand 389 n (File: SGN-E207079+) 1 CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA CTCCGATAGG 61 CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA GGGGAACTAA 121 GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA GAGGTACATG 181 TCAGACTGGT GATTGTGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC CCCCAAACAC 241 CCTAGCCGAG TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA TTTCTTTAGT 301 CGATGGATTT AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG GAAAATGTCA 361 CGCAATTCAT TGCACGGCCA ATATAAATG Predicted gene structure (within gDNA segment 13144 to 10493): Exon 1 12049 11661 ( 389 n); cDNA 1 389 ( 389 n); score: 0.910 MATCH C08HBa0235H18.1- SGN-E207079+ 0.910 389 1.000 C PGS_C08HBa0235H18.1-_SGN-E207079+ (12049 11661) Alignment (genomic DNA sequence = upper lines): CACTTTCGAG GTACGCAACA ACTGTCCATA CACCGTCTGG GCGGCGTCGA CCCCAATAGG 11990 |||| | ||| |||||||||| |||||||||| |||||| ||| ||||| |||| | || ||||| CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA CTCCGATAGG 60 CGGTGGTCGA CGTCTTGATC GAGGCCAAAC ATGGGTCATC AATGCACCGA GGGGCACTAA 11930 |||||||||| ||||| ||| |||||||||| |||||||||| ||||| |||| |||| ||||| CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA GGGGAACTAA 120 GATGGCACGT ATATGGGGTC GTACGAATTG CAACTTTGAT GGTGCTGGTA GAGGTTCATG 11870 |||||||||| |||||||||| |||| ||| ||||||| || | ||| || | ||||| |||| GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA GAGGTACATG 180 TCAGACTGGT GATTGTGGTG GGGTCTTGCA ATGTACCGGG TGGGGCAAAC CACCAAACAC 11810 |||||||||| |||||||||| | ||||| || |||||||| |||||||||| | |||||||| TCAGACTGGT GATTGTGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC CCCCAAACAC 240 CCTGGCCGAG TACGCCTTGG ACCAGTTTAG CAACCTAGAT TTCTGGGACA TTTCTTTAGT 11750 ||| |||||| |||||||||| |||||||||| |||| ||||| || ||||||| |||||||||| CCTAGCCGAG TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA TTTCTTTAGT 300 CGATGGATTT AATATTCCAA TGACTTTCGC CCCGACCAAT CCTAGTGGAG GGAAATGCCA 11690 |||||||||| |||||||||| ||||||| || ||| || || |||||||||| | ||||| || CGATGGATTT AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG GAAAATGTCA 360 TGCAATTCAT TGTACGGCTA ATATAAATG 11661 ||||||||| || ||||| | ||||||||| CGCAATTCAT TGCACGGCCA ATATAAATG 389 hqPGS_C08HBa0235H18.1-_SGN-E207079+ (12049 11661) ******************************************************************************** EST sequence 1026 +strand 467 n (File: SGN-E208115+) 1 ATAGTTCCAC AAACATGGCC TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG 61 TGACTTACAC TTATGCTGCC ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG 121 CGGCGTCGAC CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA 181 ATGCACCGAG GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG 241 GTGCTGGTAG AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT 301 GGGGCAAACC ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT 361 TCTGGGACAT TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC 421 CTAGTGGAGG GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAAT Predicted gene structure (within gDNA segment 12728 to 11052): Exon 1 12128 11662 ( 467 n); cDNA 1 467 ( 467 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E208115+ 1.000 467 1.000 C PGS_C08HBa0235H18.1-_SGN-E208115+ (12128 11662) Alignment (genomic DNA sequence = upper lines): ATAGTTCCAC AAACATGGCC TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG 12069 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGTTCCAC AAACATGGCC TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG 60 TGACTTACAC TTATGCTGCC ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG 12009 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACTTACAC TTATGCTGCC ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG 120 CGGCGTCGAC CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA 11949 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGCGTCGAC CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA 180 ATGCACCGAG GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG 11889 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGCACCGAG GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG 240 GTGCTGGTAG AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT 11829 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGCTGGTAG AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT 300 GGGGCAAACC ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT 11769 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGGCAAACC ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT 360 TCTGGGACAT TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC 11709 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTGGGACAT TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC 420 CTAGTGGAGG GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAAT 11662 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| CTAGTGGAGG GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAAT 467 hqPGS_C08HBa0235H18.1-_SGN-E208115+ (12128 11662) ******************************************************************************** EST sequence 719 +strand 457 n (File: SGN-E205100+) 1 AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 61 TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 121 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 181 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 241 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 301 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 361 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 421 AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAAT Predicted gene structure (within gDNA segment 13834 to 10503): Exon 1 12118 11662 ( 457 n); cDNA 1 457 ( 457 n); score: 0.904 MATCH C08HBa0235H18.1- SGN-E205100+ 0.904 457 1.000 C PGS_C08HBa0235H18.1-_SGN-E205100+ (12118 11662) Alignment (genomic DNA sequence = upper lines): AAACATGGCC TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG TGACTTACAC 12059 |||||||| | ||||||| || |||||||||| | ||||| | ||| || || ||||||| || AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 60 TTATGCTGCC ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG CGGCGTCGAC 11999 |||||||||| ||| | |||| |||||||||| |||||||||| ||||| |||| |||| ||||| TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 120 CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG 11939 || |||||| |||||||||| |||| |||| |||||||||| |||||||||| |||| ||||| TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 180 GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG 11879 ||| |||||| |||||||||| |||||||||| ||| |||| |||||| ||| ||| || || GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 240 AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC 11819 |||| ||||| |||||||||| |||||||||| ||||| || |||||||| | |||||||||| AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 300 ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT 11759 ||||||||| || ||||||| |||||||||| |||||||||| ||| |||||| | |||||||| CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 360 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG 11699 |||||||||| |||||||||| |||||||||| |||||| ||| || || || | |||||||||| TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 420 GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAAT 11662 ||||| || |||||||||| | ||||| || ||||||| AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAAT 457 hqPGS_C08HBa0235H18.1-_SGN-E205100+ (12118 11662) ******************************************************************************** EST sequence 1074 +strand 444 n (File: SGN-E208277+) 1 AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 61 TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 121 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 181 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 241 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 301 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 361 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 421 AAAATGTCAC GCAATTCATT GCAC Predicted gene structure (within gDNA segment 13834 to 10633): Exon 1 12118 11675 ( 444 n); cDNA 1 444 ( 444 n); score: 0.903 MATCH C08HBa0235H18.1- SGN-E208277+ 0.903 444 1.000 C PGS_C08HBa0235H18.1-_SGN-E208277+ (12118 11675) Alignment (genomic DNA sequence = upper lines): AAACATGGCC TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG TGACTTACAC 12059 |||||||| | ||||||| || |||||||||| | ||||| | ||| || || ||||||| || AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 60 TTATGCTGCC ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG CGGCGTCGAC 11999 |||||||||| ||| | |||| |||||||||| |||||||||| ||||| |||| |||| ||||| TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 120 CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG 11939 || |||||| |||||||||| |||| |||| |||||||||| |||||||||| |||| ||||| TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 180 GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG 11879 ||| |||||| |||||||||| |||||||||| ||| |||| |||||| ||| ||| || || GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 240 AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC 11819 |||| ||||| |||||||||| |||||||||| ||||| || |||||||| | |||||||||| AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 300 ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT 11759 ||||||||| || ||||||| |||||||||| |||||||||| ||| |||||| | |||||||| CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 360 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG 11699 |||||||||| |||||||||| |||||||||| |||||| ||| || || || | |||||||||| TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 420 GAAATGCCAT GCAATTCATT GTAC 11675 ||||| || |||||||||| | || AAAATGTCAC GCAATTCATT GCAC 444 hqPGS_C08HBa0235H18.1-_SGN-E208277+ (12118 11675) ******************************************************************************** EST sequence 1022 +strand 425 n (File: SGN-E276456+) 1 TCTTCTTTTG TTCTCTTCTT CCTTCTTTGT GTGACTTATA CTTATGCTGC CACTATTGAG 61 GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA CTCCGATAGG CGGTGGTCGA 121 CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA GGGGAACTAA GATGGCACGT 181 ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA GAGGTACATG TCAGACTGGT 241 GATTGTGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC CCCCAAACAC CCTAGCCGAG 301 TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA TTTCTTTAGT CGATGGATTT 361 AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG GAAAATGTCA CGCAATTCAT 421 TGCAC Predicted gene structure (within gDNA segment 13644 to 10633): Exon 1 12099 11675 ( 425 n); cDNA 1 425 ( 425 n); score: 0.904 MATCH C08HBa0235H18.1- SGN-E276456+ 0.904 425 1.000 C PGS_C08HBa0235H18.1-_SGN-E276456+ (12099 11675) Alignment (genomic DNA sequence = upper lines): TCTTCTTTTG TTTTCTTCCT TCTTGCTTTT GTGACTTACA CTTATGCTGC CACTTTCGAG 12040 |||||||||| || ||||| | ||| || | |||||||| | |||||||||| |||| | ||| TCTTCTTTTG TTCTCTTCTT CCTTCTTTGT GTGACTTATA CTTATGCTGC CACTATTGAG 60 GTACGCAACA ACTGTCCATA CACCGTCTGG GCGGCGTCGA CCCCAATAGG CGGTGGTCGA 11980 |||||||||| |||||||||| |||||| ||| ||||| |||| | || ||||| |||||||||| GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA CTCCGATAGG CGGTGGTCGA 120 CGTCTTGATC GAGGCCAAAC ATGGGTCATC AATGCACCGA GGGGCACTAA GATGGCACGT 11920 ||||| ||| |||||||||| |||||||||| ||||| |||| |||| ||||| |||||||||| CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA GGGGAACTAA GATGGCACGT 180 ATATGGGGTC GTACGAATTG CAACTTTGAT GGTGCTGGTA GAGGTTCATG TCAGACTGGT 11860 |||||||||| |||| ||| ||||||| || | ||| || | ||||| |||| |||||||||| ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA GAGGTACATG TCAGACTGGT 240 GATTGTGGTG GGGTCTTGCA ATGTACCGGG TGGGGCAAAC CACCAAACAC CCTGGCCGAG 11800 |||||||||| | ||||| || |||||||| |||||||||| | |||||||| ||| |||||| GATTGTGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC CCCCAAACAC CCTAGCCGAG 300 TACGCCTTGG ACCAGTTTAG CAACCTAGAT TTCTGGGACA TTTCTTTAGT CGATGGATTT 11740 |||||||||| |||||||||| |||| ||||| || ||||||| |||||||||| |||||||||| TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA TTTCTTTAGT CGATGGATTT 360 AATATTCCAA TGACTTTCGC CCCGACCAAT CCTAGTGGAG GGAAATGCCA TGCAATTCAT 11680 |||||||||| ||||||| || ||| || || |||||||||| | ||||| || ||||||||| AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG GAAAATGTCA CGCAATTCAT 420 TGTAC 11675 || || TGCAC 425 hqPGS_C08HBa0235H18.1-_SGN-E276456+ (12099 11675) ******************************************************************************** EST sequence 1230 +strand 445 n (File: SGN-E200871+) 1 ACAAACATGG GCTACTTGAC ATCTTCTTTT GTTCTCTTCT TCCTTCTTTG TGTGACTTAT 61 ACTTATGCTG CCACTATTGA GGTACGCAAC AACTGTCCAT ACACCGTTTG GGCGGCATCG 121 ACTCCGATAG GCGGTGGTCG ACGTCTCAAT CGAGGCCAAA CATGGGTCAT CAATGCTCCG 181 AGGGGAACTA AGATGGCACG TATATGGGGT CGTACTGGTT GCAACTTTAA TGCTGCAGGC 241 AGAGGTACAT GTCAGACTGG TGATTGTGGT GGAGTCTTAC AGTGTACCGG ATGGGGCAAA 301 CCCCCAAACA CCCTAGCCGA GTACGCCTTG GACCAGTTTA GCAACTTAGA TTTTTGGGAC 361 ATTTCTTTAG TCGATGGATT TAATATTCCA ATGACTTTTG CCCCAACAAA ACCTAGTGGA 421 GGAAAATGTC ACGCAATTCA TTGCA Predicted gene structure (within gDNA segment 13854 to 10643): Exon 1 12120 11678 ( 443 n); cDNA 1 443 ( 443 n); score: 0.905 MATCH C08HBa0235H18.1- SGN-E200871+ 0.905 443 0.996 C PGS_C08HBa0235H18.1-_SGN-E200871+ (12120 11678) Alignment (genomic DNA sequence = upper lines): ACAAACATGG CCTACTTGAG ATCTTCTTTT GTTTTCTTCC TTCTTGCTTT TGTGACTTAC 12061 |||||||||| |||||||| |||||||||| ||| ||||| | ||| || ||||||||| ACAAACATGG GCTACTTGAC ATCTTCTTTT GTTCTCTTCT TCCTTCTTTG TGTGACTTAT 60 ACTTATGCTG CCACTTTCGA GGTACGCAAC AACTGTCCAT ACACCGTCTG GGCGGCGTCG 12001 |||||||||| ||||| | || |||||||||| |||||||||| ||||||| || |||||| ||| ACTTATGCTG CCACTATTGA GGTACGCAAC AACTGTCCAT ACACCGTTTG GGCGGCATCG 120 ACCCCAATAG GCGGTGGTCG ACGTCTTGAT CGAGGCCAAA CATGGGTCAT CAATGCACCG 11941 || || |||| |||||||||| |||||| || |||||||||| |||||||||| |||||| ||| ACTCCGATAG GCGGTGGTCG ACGTCTCAAT CGAGGCCAAA CATGGGTCAT CAATGCTCCG 180 AGGGGCACTA AGATGGCACG TATATGGGGT CGTACGAATT GCAACTTTGA TGGTGCTGGT 11881 ||||| |||| |||||||||| |||||||||| ||||| || |||||||| | || ||| || AGGGGAACTA AGATGGCACG TATATGGGGT CGTACTGGTT GCAACTTTAA TGCTGCAGGC 240 AGAGGTTCAT GTCAGACTGG TGATTGTGGT GGGGTCTTGC AATGTACCGG GTGGGGCAAA 11821 |||||| ||| |||||||||| |||||||||| || ||||| | | |||||||| ||||||||| AGAGGTACAT GTCAGACTGG TGATTGTGGT GGAGTCTTAC AGTGTACCGG ATGGGGCAAA 300 CCACCAAACA CCCTGGCCGA GTACGCCTTG GACCAGTTTA GCAACCTAGA TTTCTGGGAC 11761 || ||||||| |||| ||||| |||||||||| |||||||||| ||||| |||| ||| |||||| CCCCCAAACA CCCTAGCCGA GTACGCCTTG GACCAGTTTA GCAACTTAGA TTTTTGGGAC 360 ATTTCTTTAG TCGATGGATT TAATATTCCA ATGACTTTCG CCCCGACCAA TCCTAGTGGA 11701 |||||||||| |||||||||| |||||||||| |||||||| | |||| || || ||||||||| ATTTCTTTAG TCGATGGATT TAATATTCCA ATGACTTTTG CCCCAACAAA ACCTAGTGGA 420 GGGAAATGCC ATGCAATTCA TTG 11678 || ||||| | | |||||||| ||| GGAAAATGTC ACGCAATTCA TTG 443 hqPGS_C08HBa0235H18.1-_SGN-E200871+ (12120 11678) ******************************************************************************** EST sequence 866 +strand 433 n (File: SGN-E200039+) 1 TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC TTATGCTGCC 61 ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC TCCGATAGGC 121 GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG 181 ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT 241 CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC 301 CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC 361 GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG AAAATGTCAC 421 GCAATTCATT GCA Predicted gene structure (within gDNA segment 13734 to 10643): Exon 1 12108 11678 ( 431 n); cDNA 1 431 ( 431 n); score: 0.905 MATCH C08HBa0235H18.1- SGN-E200039+ 0.905 431 0.995 C PGS_C08HBa0235H18.1-_SGN-E200039+ (12108 11678) Alignment (genomic DNA sequence = upper lines): TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG TGACTTACAC TTATGCTGCC 12049 ||||||| || |||||||||| | ||||| | ||| || || ||||||| || |||||||||| TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC TTATGCTGCC 60 ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG CGGCGTCGAC CCCAATAGGC 11989 ||| | |||| |||||||||| |||||||||| ||||| |||| |||| ||||| || |||||| ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC TCCGATAGGC 120 GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG GGGCACTAAG 11929 |||||||||| |||| |||| |||||||||| |||||||||| |||| ||||| ||| |||||| GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG 180 ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG AGGTTCATGT 11869 |||||||||| |||||||||| ||| |||| |||||| ||| ||| || || |||| ||||| ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT 240 CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC ACCAAACACC 11809 |||||||||| |||||||||| ||||| || |||||||| | |||||||||| ||||||||| CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC 300 CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT TTCTTTAGTC 11749 || ||||||| |||||||||| |||||||||| ||| |||||| | |||||||| |||||||||| CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC 360 GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG GAAATGCCAT 11689 |||||||||| |||||||||| |||||| ||| || || || | |||||||||| ||||| || GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG AAAATGTCAC 420 GCAATTCATT G 11678 |||||||||| | GCAATTCATT G 431 hqPGS_C08HBa0235H18.1-_SGN-E200039+ (12108 11678) ******************************************************************************** EST sequence 1053 +strand 429 n (File: SGN-E210426+) 1 TGACATCTTC TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 61 TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 121 GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 181 CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 241 CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 301 CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG 361 GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 421 TTCATTGCA Predicted gene structure (within gDNA segment 13694 to 10643): Exon 1 12104 11678 ( 427 n); cDNA 1 427 ( 427 n); score: 0.904 MATCH C08HBa0235H18.1- SGN-E210426+ 0.904 427 0.995 C PGS_C08HBa0235H18.1-_SGN-E210426+ (12104 11678) Alignment (genomic DNA sequence = upper lines): TGAGATCTTC TTTTGTTTTC TTCCTTCTTG CTTTTGTGAC TTACACTTAT GCTGCCACTT 12045 ||| |||||| ||||||| || ||| | ||| || |||||| ||| |||||| ||||||||| TGACATCTTC TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 60 TCGAGGTACG CAACAACTGT CCATACACCG TCTGGGCGGC GTCGACCCCA ATAGGCGGTG 11985 | |||||||| |||||||||| |||||||||| | |||||||| ||||| || |||||||||| TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 120 GTCGACGTCT TGATCGAGGC CAAACATGGG TCATCAATGC ACCGAGGGGC ACTAAGATGG 11925 |||||||||| |||||||| |||||||||| |||||||||| |||||||| |||||||||| GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 180 CACGTATATG GGGTCGTACG AATTGCAACT TTGATGGTGC TGGTAGAGGT TCATGTCAGA 11865 |||||||||| ||||||||| |||||||| || ||| ||| || |||||| ||||||||| CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 240 CTGGTGATTG TGGTGGGGTC TTGCAATGTA CCGGGTGGGG CAAACCACCA AACACCCTGG 11805 |||||||||| |||||| ||| || || |||| |||| ||||| |||||| ||| |||||||| | CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 300 CCGAGTACGC CTTGGACCAG TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG 11745 |||||||||| |||||||||| ||||||||| ||||||| || |||||||||| |||||||||| CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG 360 GATTTAATAT TCCAATGACT TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA 11685 |||||||||| |||||||||| || ||||| | | || ||||| |||||| ||| || || |||| GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 420 TTCATTG 11678 ||||||| TTCATTG 427 hqPGS_C08HBa0235H18.1-_SGN-E210426+ (12104 11678) ******************************************************************************** EST sequence 637 +strand 419 n (File: SGN-E338892+) 1 TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA TTGAGGTACG 61 CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG GTCGACGTCT 121 CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG CACGTATATG 181 GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA CTGGTGATTG 241 TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG CCGAGTACGC 301 CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG GATTTAATAT 361 TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA TTCATTGCA Predicted gene structure (within gDNA segment 13594 to 10643): Exon 1 12094 11678 ( 417 n); cDNA 1 417 ( 417 n); score: 0.904 MATCH C08HBa0235H18.1- SGN-E338892+ 0.904 417 0.995 C PGS_C08HBa0235H18.1-_SGN-E338892+ (12094 11678) Alignment (genomic DNA sequence = upper lines): TTTTGTTTTC TTCCTTCTTG CTTTTGTGAC TTACACTTAT GCTGCCACTT TCGAGGTACG 12035 ||||||| || ||| | ||| || |||||| ||| |||||| ||||||||| | |||||||| TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA TTGAGGTACG 60 CAACAACTGT CCATACACCG TCTGGGCGGC GTCGACCCCA ATAGGCGGTG GTCGACGTCT 11975 |||||||||| |||||||||| | |||||||| ||||| || |||||||||| |||||||||| CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG GTCGACGTCT 120 TGATCGAGGC CAAACATGGG TCATCAATGC ACCGAGGGGC ACTAAGATGG CACGTATATG 11915 |||||||| |||||||||| |||||||||| |||||||| |||||||||| |||||||||| CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG CACGTATATG 180 GGGTCGTACG AATTGCAACT TTGATGGTGC TGGTAGAGGT TCATGTCAGA CTGGTGATTG 11855 ||||||||| |||||||| || ||| ||| || |||||| ||||||||| |||||||||| GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA CTGGTGATTG 240 TGGTGGGGTC TTGCAATGTA CCGGGTGGGG CAAACCACCA AACACCCTGG CCGAGTACGC 11795 |||||| ||| || || |||| |||| ||||| |||||| ||| |||||||| | |||||||||| TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG CCGAGTACGC 300 CTTGGACCAG TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG GATTTAATAT 11735 |||||||||| ||||||||| ||||||| || |||||||||| |||||||||| |||||||||| CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG GATTTAATAT 360 TCCAATGACT TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA TTCATTG 11678 |||||||||| || ||||| | | || ||||| |||||| ||| || || |||| ||||||| TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA TTCATTG 417 hqPGS_C08HBa0235H18.1-_SGN-E338892+ (12094 11678) ******************************************************************************** EST sequence 910 +strand 426 n (File: SGN-E256174+) 1 TGACATCTTC TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 61 TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 121 GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 181 CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC ATGCAGAGGT ACATGTCAGA 241 CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 301 CCGAGTACGC CTTGGACCAG TTTAGCAACT TATATTTTTG GGACATTTCT TTAGTCGATG 361 GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 421 TTCATT Predicted gene structure (within gDNA segment 13694 to 10673): Exon 1 12104 11679 ( 426 n); cDNA 1 426 ( 426 n); score: 0.899 MATCH C08HBa0235H18.1- SGN-E256174+ 0.899 426 1.000 C PGS_C08HBa0235H18.1-_SGN-E256174+ (12104 11679) Alignment (genomic DNA sequence = upper lines): TGAGATCTTC TTTTGTTTTC TTCCTTCTTG CTTTTGTGAC TTACACTTAT GCTGCCACTT 12045 ||| |||||| ||||||| || ||| | ||| || |||||| ||| |||||| ||||||||| TGACATCTTC TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 60 TCGAGGTACG CAACAACTGT CCATACACCG TCTGGGCGGC GTCGACCCCA ATAGGCGGTG 11985 | |||||||| |||||||||| |||||||||| | |||||||| ||||| || |||||||||| TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 120 GTCGACGTCT TGATCGAGGC CAAACATGGG TCATCAATGC ACCGAGGGGC ACTAAGATGG 11925 |||||||||| |||||||| |||||||||| |||||||||| |||||||| |||||||||| GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 180 CACGTATATG GGGTCGTACG AATTGCAACT TTGATGGTGC TGGTAGAGGT TCATGTCAGA 11865 |||||||||| ||||||||| |||||||| || ||| ||| | |||||| ||||||||| CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC ATGCAGAGGT ACATGTCAGA 240 CTGGTGATTG TGGTGGGGTC TTGCAATGTA CCGGGTGGGG CAAACCACCA AACACCCTGG 11805 |||||||||| |||||| ||| || || |||| |||| ||||| |||||| ||| |||||||| | CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 300 CCGAGTACGC CTTGGACCAG TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG 11745 |||||||||| |||||||||| ||||||||| || |||| || |||||||||| |||||||||| CCGAGTACGC CTTGGACCAG TTTAGCAACT TATATTTTTG GGACATTTCT TTAGTCGATG 360 GATTTAATAT TCCAATGACT TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA 11685 |||||||||| |||||||||| || ||||| | | || ||||| |||||| ||| || || |||| GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 420 TTCATT 11679 |||||| TTCATT 426 hqPGS_C08HBa0235H18.1-_SGN-E256174+ (12104 11679) ******************************************************************************** EST sequence 1166 +strand 410 n (File: SGN-E208827+) 1 TCTCTTCTTC CTTCTTTGTG TGACTTATAC TTATGCTGCC ACTATTGAGG TACGCAACAA 61 CTGTCCATAC ACCGTTTGGG CGGCATCGAC TCCGATAGGC GGTGGTCGAC GTCTCAATCG 121 AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG ATGGCACGTA TATGGGGTCG 181 TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT CAGACTGGTG ATTGTGGTGG 241 AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC CTAGCCGAGT ACGCCTTGGA 301 CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC GATGGATTTA ATATTCCAAT 361 GACTTTTGCC CCAACAAAAC CTAGTGGAGG AAAATGTCAC GCAATTCATT Predicted gene structure (within gDNA segment 13534 to 10673): Exon 1 12086 11679 ( 408 n); cDNA 3 410 ( 408 n); score: 0.904 MATCH C08HBa0235H18.1- SGN-E208827+ 0.904 408 0.995 C PGS_C08HBa0235H18.1-_SGN-E208827+ (12086 11679) Alignment (genomic DNA sequence = upper lines): TCTTCCTTCT TGCTTTTGTG ACTTACACTT ATGCTGCCAC TTTCGAGGTA CGCAACAACT 12027 ||||| | || | || |||| ||||| |||| |||||||||| | | |||||| |||||||||| TCTTCTTCCT TCTTTGTGTG ACTTATACTT ATGCTGCCAC TATTGAGGTA CGCAACAACT 62 GTCCATACAC CGTCTGGGCG GCGTCGACCC CAATAGGCGG TGGTCGACGT CTTGATCGAG 11967 |||||||||| ||| |||||| || ||||| | | |||||||| |||||||||| || |||||| GTCCATACAC CGTTTGGGCG GCATCGACTC CGATAGGCGG TGGTCGACGT CTCAATCGAG 122 GCCAAACATG GGTCATCAAT GCACCGAGGG GCACTAAGAT GGCACGTATA TGGGGTCGTA 11907 |||||||||| |||||||||| || ||||||| | |||||||| |||||||||| |||||||||| GCCAAACATG GGTCATCAAT GCTCCGAGGG GAACTAAGAT GGCACGTATA TGGGGTCGTA 182 CGAATTGCAA CTTTGATGGT GCTGGTAGAG GTTCATGTCA GACTGGTGAT TGTGGTGGGG 11847 | |||||| |||| ||| | || || |||| || ||||||| |||||||||| |||||||| | CTGGTTGCAA CTTTAATGCT GCAGGCAGAG GTACATGTCA GACTGGTGAT TGTGGTGGAG 242 TCTTGCAATG TACCGGGTGG GGCAAACCAC CAAACACCCT GGCCGAGTAC GCCTTGGACC 11787 |||| || || |||||| ||| |||||||| | |||||||||| ||||||||| |||||||||| TCTTACAGTG TACCGGATGG GGCAAACCCC CAAACACCCT AGCCGAGTAC GCCTTGGACC 302 AGTTTAGCAA CCTAGATTTC TGGGACATTT CTTTAGTCGA TGGATTTAAT ATTCCAATGA 11727 |||||||||| | ||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTTAGCAA CTTAGATTTT TGGGACATTT CTTTAGTCGA TGGATTTAAT ATTCCAATGA 362 CTTTCGCCCC GACCAATCCT AGTGGAGGGA AATGCCATGC AATTCATT 11679 |||| ||||| || || ||| |||||||| | |||| || || |||||||| CTTTTGCCCC AACAAAACCT AGTGGAGGAA AATGTCACGC AATTCATT 410 hqPGS_C08HBa0235H18.1-_SGN-E208827+ (12086 11679) ******************************************************************************** EST sequence 988 +strand 431 n (File: SGN-E207769+) 1 AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 61 TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 121 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 181 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 241 AGGTACATGT CACACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 301 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 361 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 421 AAAATGTCAC G Predicted gene structure (within gDNA segment 13834 to 10763): Exon 1 12118 11690 ( 429 n); cDNA 1 429 ( 429 n); score: 0.902 MATCH C08HBa0235H18.1- SGN-E207769+ 0.902 429 0.995 C PGS_C08HBa0235H18.1-_SGN-E207769+ (12118 11690) Alignment (genomic DNA sequence = upper lines): AAACATGGCC TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG TGACTTACAC 12059 |||||||| | ||||||| || |||||||||| | ||||| | ||| || || ||||||| || AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 60 TTATGCTGCC ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG CGGCGTCGAC 11999 |||||||||| ||| | |||| |||||||||| |||||||||| ||||| |||| |||| ||||| TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 120 CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG 11939 || |||||| |||||||||| |||| |||| |||||||||| |||||||||| |||| ||||| TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 180 GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG 11879 ||| |||||| |||||||||| |||||||||| ||| |||| |||||| ||| ||| || || GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 240 AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC 11819 |||| ||||| || ||||||| |||||||||| ||||| || |||||||| | |||||||||| AGGTACATGT CACACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 300 ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT 11759 ||||||||| || ||||||| |||||||||| |||||||||| ||| |||||| | |||||||| CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 360 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG 11699 |||||||||| |||||||||| |||||||||| |||||| ||| || || || | |||||||||| TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 420 GAAATGCCA 11690 ||||| || AAAATGTCA 429 hqPGS_C08HBa0235H18.1-_SGN-E207769+ (12118 11690) ******************************************************************************** EST sequence 1149 +strand 418 n (File: SGN-E201442+) 1 TTGACATCTT CTTTTGTTCT CTTCTTCCTT CTTTGTGTGA CTTATACTTA TGCTGCCACT 61 ATTGAGGTAC GCAACAACTG TCCATACACC GTTTGGGCGG CATCGACTCC GATAGGCGGT 121 GGTCGACGTC TCAATCGAGG CCAAACATGG GTCATCAATG CTCCGAGGGG AACTAAGATG 181 GCACGTATAT GGGGTCGTAC TGGTTGCAAC TTTAATGCTG CAGGCAGAGG TACATGTCAG 241 ACTGGTGATT GTGGTGGAGT CTTACAGTGT ACCGGATGGG GCAAACCCCC AAACACCCTA 301 GCCGAGTACG CCTTGGACCA GTTTAGCAAC TTAGATTTTT GGGACATTTC TTTAGTCGAT 361 GGATTTAATA TTCCAATGAC TTTTGCCCCA ACAAAACCTA GTGGAGGAAA ATGTCACG Predicted gene structure (within gDNA segment 13704 to 10763): Exon 1 12105 11690 ( 416 n); cDNA 1 416 ( 416 n); score: 0.904 MATCH C08HBa0235H18.1- SGN-E201442+ 0.904 416 0.995 C PGS_C08HBa0235H18.1-_SGN-E201442+ (12105 11690) Alignment (genomic DNA sequence = upper lines): TTGAGATCTT CTTTTGTTTT CTTCCTTCTT GCTTTTGTGA CTTACACTTA TGCTGCCACT 12046 |||| ||||| |||||||| | |||| | ||| || ||||| |||| ||||| |||||||||| TTGACATCTT CTTTTGTTCT CTTCTTCCTT CTTTGTGTGA CTTATACTTA TGCTGCCACT 60 TTCGAGGTAC GCAACAACTG TCCATACACC GTCTGGGCGG CGTCGACCCC AATAGGCGGT 11986 | ||||||| |||||||||| |||||||||| || ||||||| | ||||| || ||||||||| ATTGAGGTAC GCAACAACTG TCCATACACC GTTTGGGCGG CATCGACTCC GATAGGCGGT 120 GGTCGACGTC TTGATCGAGG CCAAACATGG GTCATCAATG CACCGAGGGG CACTAAGATG 11926 |||||||||| | ||||||| |||||||||| |||||||||| | |||||||| ||||||||| GGTCGACGTC TCAATCGAGG CCAAACATGG GTCATCAATG CTCCGAGGGG AACTAAGATG 180 GCACGTATAT GGGGTCGTAC GAATTGCAAC TTTGATGGTG CTGGTAGAGG TTCATGTCAG 11866 |||||||||| |||||||||| ||||||| ||| ||| || | || ||||| | |||||||| GCACGTATAT GGGGTCGTAC TGGTTGCAAC TTTAATGCTG CAGGCAGAGG TACATGTCAG 240 ACTGGTGATT GTGGTGGGGT CTTGCAATGT ACCGGGTGGG GCAAACCACC AAACACCCTG 11806 |||||||||| ||||||| || ||| || ||| ||||| |||| ||||||| || ||||||||| ACTGGTGATT GTGGTGGAGT CTTACAGTGT ACCGGATGGG GCAAACCCCC AAACACCCTA 300 GCCGAGTACG CCTTGGACCA GTTTAGCAAC CTAGATTTCT GGGACATTTC TTTAGTCGAT 11746 |||||||||| |||||||||| |||||||||| ||||||| | |||||||||| |||||||||| GCCGAGTACG CCTTGGACCA GTTTAGCAAC TTAGATTTTT GGGACATTTC TTTAGTCGAT 360 GGATTTAATA TTCCAATGAC TTTCGCCCCG ACCAATCCTA GTGGAGGGAA ATGCCA 11690 |||||||||| |||||||||| ||| ||||| || || |||| ||||||| || ||| || GGATTTAATA TTCCAATGAC TTTTGCCCCA ACAAAACCTA GTGGAGGAAA ATGTCA 416 hqPGS_C08HBa0235H18.1-_SGN-E201442+ (12105 11690) ******************************************************************************** EST sequence 822 +strand 413 n (File: SGN-E336913+) 1 AGGCTTCTTT TGTTCTCTTC TTCCTTCTTT GTGTGACTTA TACTTATGCT GCCACTATTG 61 AGGTACGCAA CAACTGTCCA TACACCGTTT GGGCGGCATC GACTCCGATA GGCGGTGGTC 121 GACGTCTCAA TCGAGGCCAA ACATGGGTCA TCAATGCTCC GAGGGGAACT AAGATGGCAC 181 GTATATGGGG TCGTACTGGT TGCAACTTTA ATGCTGCAGG CAGAGGTACA TGTCAGACTG 241 GTGATTGTGG TGGAGTCTTA CAGTGTACCG GATGGGGCAA ACCCCCAAAC ACCCTAGCCG 301 AGTACGCCTT GGACCAGTTT AGCAACTTAG ATTTTTGGGA CATTTCTTTA GTCGATGGAT 361 TTAATATTCC AATGACTTTT GCCCCAACAA AACCTAGTGG AGGAAAATGT CAC Predicted gene structure (within gDNA segment 13664 to 10773): Exon 1 12098 11690 ( 409 n); cDNA 4 412 ( 409 n); score: 0.905 MATCH C08HBa0235H18.1- SGN-E336913+ 0.905 409 0.990 C PGS_C08HBa0235H18.1-_SGN-E336913+ (12098 11690) Alignment (genomic DNA sequence = upper lines): CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG TGACTTACAC TTATGCTGCC ACTTTCGAGG 12039 |||||||||| | ||||| | ||| || || ||||||| || |||||||||| ||| | |||| CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC TTATGCTGCC ACTATTGAGG 63 TACGCAACAA CTGTCCATAC ACCGTCTGGG CGGCGTCGAC CCCAATAGGC GGTGGTCGAC 11979 |||||||||| |||||||||| ||||| |||| |||| ||||| || |||||| |||||||||| TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC TCCGATAGGC GGTGGTCGAC 123 GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG GGGCACTAAG ATGGCACGTA 11919 |||| |||| |||||||||| |||||||||| |||| ||||| ||| |||||| |||||||||| GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG ATGGCACGTA 183 TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG AGGTTCATGT CAGACTGGTG 11859 |||||||||| ||| |||| |||||| ||| ||| || || |||| ||||| |||||||||| TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT CAGACTGGTG 243 ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC ACCAAACACC CTGGCCGAGT 11799 |||||||||| ||||| || |||||||| | |||||||||| ||||||||| || ||||||| ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC CTAGCCGAGT 303 ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT TTCTTTAGTC GATGGATTTA 11739 |||||||||| |||||||||| ||| |||||| | |||||||| |||||||||| |||||||||| ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC GATGGATTTA 363 ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG GAAATGCCA 11690 |||||||||| |||||| ||| || || || | |||||||||| ||||| || ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG AAAATGTCA 412 hqPGS_C08HBa0235H18.1-_SGN-E336913+ (12098 11690) ******************************************************************************** EST sequence 886 +strand 335 n (File: SGN-E200631+) 1 CACTATTGAG TACCAACAAC TGTCCATACA CCGTTGGGCG GCATCACTCG ATAGGCGGGG 61 TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAATGGCA 121 CGTATATGGG GTCGTACTGG TTGCAACTTT AATGCTGCAG GCAGAGGTAC ATGTCAGACT 181 GGTGATTGGG TGGAGTCTTA CAGTGTACCG GATGGGGCAA ACCCCCAAAC ACCCTAGCCG 241 AGTACGCCTT GGACCAGTTT AGCAACTTAG ATTTTTGGGA CATTTCTTTA GTCGATGGAT 301 TTAATATTCC AATGACTTTT GCCCCAACAA AACCT Predicted gene structure (within gDNA segment 13282 to 10953): Exon 1 12049 11707 ( 343 n); cDNA 1 335 ( 335 n); score: 0.892 MATCH C08HBa0235H18.1- SGN-E200631+ 0.892 343 1.024 C PGS_C08HBa0235H18.1-_SGN-E200631+ (12049 11707) Alignment (genomic DNA sequence = upper lines): CACTTTCGAG GTACGCAACA ACTGTCCATA CACCGTCTGG GCGGCGTCGA CCCCAATAGG 11990 |||| | || |||| ||||| |||||||||| |||||| ||| ||||| || | | | ||||| CACTATTGA- GTAC-CAACA ACTGTCCATA CACCGT-TGG GCGGCATC-A -CTCGATAGG 55 CGGTGGTCGA CGTCTTGATC GAGGCCAAAC ATGGGTCATC AATGCACCGA GGGGCACTAA 11930 ||| |||||| ||||| ||| |||||||||| |||||||||| ||||| |||| |||| ||||| CGG-GGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA GGGGAACTAA 114 GATGGCACGT ATATGGGGTC GTACGAATTG CAACTTTGAT GGTGCTGGTA GAGGTTCATG 11870 ||||||||| |||||||||| |||| ||| ||||||| || | ||| || | ||||| |||| -ATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA GAGGTACATG 173 TCAGACTGGT GATTGTGGTG GGGTCTTGCA ATGTACCGGG TGGGGCAAAC CACCAAACAC 11810 |||||||||| ||||| |||| | ||||| || |||||||| |||||||||| | |||||||| TCAGACTGGT GATTG-GGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC CCCCAAACAC 232 CCTGGCCGAG TACGCCTTGG ACCAGTTTAG CAACCTAGAT TTCTGGGACA TTTCTTTAGT 11750 ||| |||||| |||||||||| |||||||||| |||| ||||| || ||||||| |||||||||| CCTAGCCGAG TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA TTTCTTTAGT 292 CGATGGATTT AATATTCCAA TGACTTTCGC CCCGACCAAT CCT 11707 |||||||||| |||||||||| ||||||| || ||| || || ||| CGATGGATTT AATATTCCAA TGACTTTTGC CCCAACAAAA CCT 335 hqPGS_C08HBa0235H18.1-_SGN-E200631+ (12049 11707) ******************************************************************************** EST sequence 709 +strand 395 n (File: SGN-E204939+) 1 TTGACATCTT CTTTTGTTCT CTTCTTCCTT CTTTGTGTGA CTTATACTTA TGCTGCCACT 61 ATTGAGGTAC GCAACAACTG TCCATACACC GTTTGGGCGG CATCGACTCC GATAGGCGGT 121 GGTCGACGTC TCAATCGAGG CCAAACATGG GTCATCAATG CTCCGAGGGG AACTAAGATG 181 GCACGTATAT GGGGTCGTAC TGGTTGCAAC TTTAATGCTG CAGGCAGAGG TACATGTCAG 241 ACTGGTGATT GTGGTGGAGT CTTACAGTGT ACCGGATGGG GCAAACCCCC AAACACCCTA 301 GCCGAGTACG CCTTGGACCA GTTTAGCAAC TTAGATTTTT GGGACATTTC TTTAGTCGAT 361 GGATTTAATA TTCCAATGAC TTTTGCCCCA ACAAA Predicted gene structure (within gDNA segment 13704 to 10993): Exon 1 12105 11711 ( 395 n); cDNA 1 395 ( 395 n); score: 0.906 MATCH C08HBa0235H18.1- SGN-E204939+ 0.906 395 1.000 C PGS_C08HBa0235H18.1-_SGN-E204939+ (12105 11711) Alignment (genomic DNA sequence = upper lines): TTGAGATCTT CTTTTGTTTT CTTCCTTCTT GCTTTTGTGA CTTACACTTA TGCTGCCACT 12046 |||| ||||| |||||||| | |||| | ||| || ||||| |||| ||||| |||||||||| TTGACATCTT CTTTTGTTCT CTTCTTCCTT CTTTGTGTGA CTTATACTTA TGCTGCCACT 60 TTCGAGGTAC GCAACAACTG TCCATACACC GTCTGGGCGG CGTCGACCCC AATAGGCGGT 11986 | ||||||| |||||||||| |||||||||| || ||||||| | ||||| || ||||||||| ATTGAGGTAC GCAACAACTG TCCATACACC GTTTGGGCGG CATCGACTCC GATAGGCGGT 120 GGTCGACGTC TTGATCGAGG CCAAACATGG GTCATCAATG CACCGAGGGG CACTAAGATG 11926 |||||||||| | ||||||| |||||||||| |||||||||| | |||||||| ||||||||| GGTCGACGTC TCAATCGAGG CCAAACATGG GTCATCAATG CTCCGAGGGG AACTAAGATG 180 GCACGTATAT GGGGTCGTAC GAATTGCAAC TTTGATGGTG CTGGTAGAGG TTCATGTCAG 11866 |||||||||| |||||||||| ||||||| ||| ||| || | || ||||| | |||||||| GCACGTATAT GGGGTCGTAC TGGTTGCAAC TTTAATGCTG CAGGCAGAGG TACATGTCAG 240 ACTGGTGATT GTGGTGGGGT CTTGCAATGT ACCGGGTGGG GCAAACCACC AAACACCCTG 11806 |||||||||| ||||||| || ||| || ||| ||||| |||| ||||||| || ||||||||| ACTGGTGATT GTGGTGGAGT CTTACAGTGT ACCGGATGGG GCAAACCCCC AAACACCCTA 300 GCCGAGTACG CCTTGGACCA GTTTAGCAAC CTAGATTTCT GGGACATTTC TTTAGTCGAT 11746 |||||||||| |||||||||| |||||||||| ||||||| | |||||||||| |||||||||| GCCGAGTACG CCTTGGACCA GTTTAGCAAC TTAGATTTTT GGGACATTTC TTTAGTCGAT 360 GGATTTAATA TTCCAATGAC TTTCGCCCCG ACCAA 11711 |||||||||| |||||||||| ||| ||||| || || GGATTTAATA TTCCAATGAC TTTTGCCCCA ACAAA 395 hqPGS_C08HBa0235H18.1-_SGN-E204939+ (12105 11711) ******************************************************************************** EST sequence 1137 +strand 390 n (File: SGN-E210135+) 1 CATCTTCTTT TGTTCTCTTC TTCCTTCTTT GTGTGACTTA TACTTATGCT GCCACTATTG 61 AGGTACGCAA CAACTGTCCA TACACCGTTT GGGCGGCATC GACTCCGATA GGCGGTGGTC 121 GACGTCTCAA TCGAGGCCAA ACATGGGTCA TCAATGCTCC GAGGGGAACT AAGATGGCAC 181 GTATATGGGG TCGTACTGGT TGCAACTTTA ATGCTGCAGG CAGAGGTACA TGTCAGACTG 241 GTGATTGTGG TGGAGTCTTA CAGTGTACCG GATGGGGCAA ACCCCCAAAC ACCCTAACCG 301 AGTACGCCTT GGACCAGCTT AGCAACTTAT ATTTTTGGGA CATTTCTTTA GTCGATGGAT 361 TTAATATTCC AATGACTTTT GCCCCAACAA Predicted gene structure (within gDNA segment 13664 to 11003): Exon 1 12100 11714 ( 387 n); cDNA 2 388 ( 387 n); score: 0.902 MATCH C08HBa0235H18.1- SGN-E210135+ 0.902 387 0.992 C PGS_C08HBa0235H18.1-_SGN-E210135+ (12100 11714) Alignment (genomic DNA sequence = upper lines): ATCTTCTTTT GTTTTCTTCC TTCTTGCTTT TGTGACTTAC ACTTATGCTG CCACTTTCGA 12041 |||||||||| ||| ||||| | ||| || ||||||||| |||||||||| ||||| | || ATCTTCTTTT GTTCTCTTCT TCCTTCTTTG TGTGACTTAT ACTTATGCTG CCACTATTGA 61 GGTACGCAAC AACTGTCCAT ACACCGTCTG GGCGGCGTCG ACCCCAATAG GCGGTGGTCG 11981 |||||||||| |||||||||| ||||||| || |||||| ||| || || |||| |||||||||| GGTACGCAAC AACTGTCCAT ACACCGTTTG GGCGGCATCG ACTCCGATAG GCGGTGGTCG 121 ACGTCTTGAT CGAGGCCAAA CATGGGTCAT CAATGCACCG AGGGGCACTA AGATGGCACG 11921 |||||| || |||||||||| |||||||||| |||||| ||| ||||| |||| |||||||||| ACGTCTCAAT CGAGGCCAAA CATGGGTCAT CAATGCTCCG AGGGGAACTA AGATGGCACG 181 TATATGGGGT CGTACGAATT GCAACTTTGA TGGTGCTGGT AGAGGTTCAT GTCAGACTGG 11861 |||||||||| ||||| || |||||||| | || ||| || |||||| ||| |||||||||| TATATGGGGT CGTACTGGTT GCAACTTTAA TGCTGCAGGC AGAGGTACAT GTCAGACTGG 241 TGATTGTGGT GGGGTCTTGC AATGTACCGG GTGGGGCAAA CCACCAAACA CCCTGGCCGA 11801 |||||||||| || ||||| | | |||||||| ||||||||| || ||||||| |||| |||| TGATTGTGGT GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAACA CCCTAACCGA 301 GTACGCCTTG GACCAGTTTA GCAACCTAGA TTTCTGGGAC ATTTCTTTAG TCGATGGATT 11741 |||||||||| |||||| ||| ||||| || | ||| |||||| |||||||||| |||||||||| GTACGCCTTG GACCAGCTTA GCAACTTATA TTTTTGGGAC ATTTCTTTAG TCGATGGATT 361 TAATATTCCA ATGACTTTCG CCCCGAC 11714 |||||||||| |||||||| | |||| || TAATATTCCA ATGACTTTTG CCCCAAC 388 hqPGS_C08HBa0235H18.1-_SGN-E210135+ (12100 11714) ******************************************************************************** EST sequence 741 +strand 349 n (File: SGN-E278209+) 1 TACACTTATG CTGCCACTTT CGAGGTACGC AACAACTGTC CATACACCGT CTGGGCGGCG 61 TCGACCCCAA TAGGCGGTGG TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA 121 CCGAGGGGCA CTAAGATGGC ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT 181 GGTAGAGGTT CATGTCAGAC TGGTGATTGT GGGGGGGGTC TTGCAATGTA CCGGGTGGGG 241 CAAACCACCA AACACCCTGG CCGAGTACGC CTTGGACCAG TTTAGCAACC TAGATTTCTG 301 GGACATTTCT TTAGTCGATG GATTTAATAT TCCAATGACT TTCGCCCCG Predicted gene structure (within gDNA segment 12663 to 11106): Exon 1 12063 11716 ( 348 n); cDNA 1 349 ( 349 n); score: 0.990 MATCH C08HBa0235H18.1- SGN-E278209+ 0.990 348 0.997 C PGS_C08HBa0235H18.1-_SGN-E278209+ (12063 11716) Alignment (genomic DNA sequence = upper lines): TACACTTATG CTGCCACTTT CGAGGTACGC AACAACTGTC CATACACCGT CTGGGCGGCG 12004 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACACTTATG CTGCCACTTT CGAGGTACGC AACAACTGTC CATACACCGT CTGGGCGGCG 60 TCGACCCCAA TAGGCGGTGG TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA 11944 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGACCCCAA TAGGCGGTGG TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA 120 CCGAGGGGCA CTAAGATGGC ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT 11884 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGAGGGGCA CTAAGATGGC ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT 180 GGTAGAGGTT CATGTCAGAC TGGTGATTGT -GGTGGGGTC TTGCAATGTA CCGGGTGGGG 11825 |||||||||| |||||||||| |||||||||| || |||||| |||||||||| |||||||||| GGTAGAGGTT CATGTCAGAC TGGTGATTGT GGGGGGGGTC TTGCAATGTA CCGGGTGGGG 240 CAAACCACCA AACACCCTGG CCGAGTACGC CTTGGACCAG TTTAGCAACC TAGATTTCTG 11765 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAACCACCA AACACCCTGG CCGAGTACGC CTTGGACCAG TTTAGCAACC TAGATTTCTG 300 GGACATTTCT TTAGTCGATG GATTTAATAT TCCAATGACT TTCGCCCCG 11716 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| GGACATTTCT TTAGTCGATG GATTTAATAT TCCAATGACT TTCGCCCCG 349 hqPGS_C08HBa0235H18.1-_SGN-E278209+ (12063 11716) ******************************************************************************** EST sequence 1057 +strand 265 n (File: SGN-E210564+) 1 GCGGTGGTCG ACGTCTCAAT CGAGGCCAAA CATGGGTCAT CAATGCTCCG AGGGGAACTA 61 AGATGGCACG TATATGGGGT CGTACTGGTT GCAACTTTAA TGCTGCAGGC AGAGGTACAT 121 GTCAGACTGG TGATTGTGGT GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAACA 181 CCCTAGCCGA GTACGCCTTG GACCAGTTTA GCAACTTAGA TTTTTGGGAC ATTTCTTTAG 241 TCGATGGATT TAATATTCCA ATGAC Predicted gene structure (within gDNA segment 12590 to 11116): Exon 1 11990 11726 ( 265 n); cDNA 1 265 ( 265 n); score: 0.925 MATCH C08HBa0235H18.1- SGN-E210564+ 0.925 265 1.000 C PGS_C08HBa0235H18.1-_SGN-E210564+ (11990 11726) Alignment (genomic DNA sequence = upper lines): GCGGTGGTCG ACGTCTTGAT CGAGGCCAAA CATGGGTCAT CAATGCACCG AGGGGCACTA 11931 |||||||||| |||||| || |||||||||| |||||||||| |||||| ||| ||||| |||| GCGGTGGTCG ACGTCTCAAT CGAGGCCAAA CATGGGTCAT CAATGCTCCG AGGGGAACTA 60 AGATGGCACG TATATGGGGT CGTACGAATT GCAACTTTGA TGGTGCTGGT AGAGGTTCAT 11871 |||||||||| |||||||||| ||||| || |||||||| | || ||| || |||||| ||| AGATGGCACG TATATGGGGT CGTACTGGTT GCAACTTTAA TGCTGCAGGC AGAGGTACAT 120 GTCAGACTGG TGATTGTGGT GGGGTCTTGC AATGTACCGG GTGGGGCAAA CCACCAAACA 11811 |||||||||| |||||||||| || ||||| | | |||||||| ||||||||| || ||||||| GTCAGACTGG TGATTGTGGT GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAACA 180 CCCTGGCCGA GTACGCCTTG GACCAGTTTA GCAACCTAGA TTTCTGGGAC ATTTCTTTAG 11751 |||| ||||| |||||||||| |||||||||| ||||| |||| ||| |||||| |||||||||| CCCTAGCCGA GTACGCCTTG GACCAGTTTA GCAACTTAGA TTTTTGGGAC ATTTCTTTAG 240 TCGATGGATT TAATATTCCA ATGAC 11726 |||||||||| |||||||||| ||||| TCGATGGATT TAATATTCCA ATGAC 265 hqPGS_C08HBa0235H18.1-_SGN-E210564+ (11990 11726) ******************************************************************************** EST sequence 645 +strand 386 n (File: SGN-E338707+) 1 CGGCACGAGG GCTACTTGAC ATCTTCTTTT GTTCTCTTCT TCCTTCTTTG TGTGACTTAT 61 ACTTATGCTG CCACTATTGA GGTACGCAAC AACTGTCCAT ACACCGTTTG GGCGGCATCG 121 ACTCCGATAG GCGGTGGTCG ACGTCTCAAT CGAGGCCAAA CATGGGTCAT CAATGCTCCG 181 AGGGGAACTA AGATGGCACG TATATGGGGT CGTACTGGTT GCAACTTTAA TGCTGCAGGC 241 AGAGGTACAT GTCAGACTGG TGATTGTGGT GGAGTCTTAC AGTGTACCGG ATGGGGCAAA 301 CCCCCAAACA CCCTAGCCGA GTACGCCTTG GACCAGTTTA GCAACTTAGA TTTTTGGGAC 361 ATTTCTTTAG TCGATGGATT TAATAT Predicted gene structure (within gDNA segment 13854 to 11125): Exon 1 12116 11735 ( 382 n); cDNA 5 386 ( 382 n); score: 0.903 MATCH C08HBa0235H18.1- SGN-E338707+ 0.903 382 0.990 C PGS_C08HBa0235H18.1-_SGN-E338707+ (12116 11735) Alignment (genomic DNA sequence = upper lines): ACATGGCCTA CTTGAGATCT TCTTTTGTTT TCTTCCTTCT TGCTTTTGTG ACTTACACTT 12057 || || ||| ||||| |||| ||||||||| ||||| | || | || |||| ||||| |||| ACGAGGGCTA CTTGACATCT TCTTTTGTTC TCTTCTTCCT TCTTTGTGTG ACTTATACTT 64 ATGCTGCCAC TTTCGAGGTA CGCAACAACT GTCCATACAC CGTCTGGGCG GCGTCGACCC 11997 |||||||||| | | |||||| |||||||||| |||||||||| ||| |||||| || ||||| | ATGCTGCCAC TATTGAGGTA CGCAACAACT GTCCATACAC CGTTTGGGCG GCATCGACTC 124 CAATAGGCGG TGGTCGACGT CTTGATCGAG GCCAAACATG GGTCATCAAT GCACCGAGGG 11937 | |||||||| |||||||||| || |||||| |||||||||| |||||||||| || ||||||| CGATAGGCGG TGGTCGACGT CTCAATCGAG GCCAAACATG GGTCATCAAT GCTCCGAGGG 184 GCACTAAGAT GGCACGTATA TGGGGTCGTA CGAATTGCAA CTTTGATGGT GCTGGTAGAG 11877 | |||||||| |||||||||| |||||||||| | |||||| |||| ||| | || || |||| GAACTAAGAT GGCACGTATA TGGGGTCGTA CTGGTTGCAA CTTTAATGCT GCAGGCAGAG 244 GTTCATGTCA GACTGGTGAT TGTGGTGGGG TCTTGCAATG TACCGGGTGG GGCAAACCAC 11817 || ||||||| |||||||||| |||||||| | |||| || || |||||| ||| |||||||| | GTACATGTCA GACTGGTGAT TGTGGTGGAG TCTTACAGTG TACCGGATGG GGCAAACCCC 304 CAAACACCCT GGCCGAGTAC GCCTTGGACC AGTTTAGCAA CCTAGATTTC TGGGACATTT 11757 |||||||||| ||||||||| |||||||||| |||||||||| | ||||||| |||||||||| CAAACACCCT AGCCGAGTAC GCCTTGGACC AGTTTAGCAA CTTAGATTTT TGGGACATTT 364 CTTTAGTCGA TGGATTTAAT AT 11735 |||||||||| |||||||||| || CTTTAGTCGA TGGATTTAAT AT 386 hqPGS_C08HBa0235H18.1-_SGN-E338707+ (12116 11735) ******************************************************************************** EST sequence 611 +strand 379 n (File: SGN-E337746+) 1 TGGCCTACTT GAGATCTTCT TTTGTTTTCT TCCTTCTTGC TTTTGTGACT TACACTTATG 61 CTGCCACTTT CGAGGTACGC AACAACTGTC CATACACCGT CTGGGCGGCG TCGACCCCAA 121 TAGGCGGTGG TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA CCGAGGGGCA 181 CTAAGATGGC ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT GGTAGAGGTT 241 CATGTCATAC TGGTGATTGT GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA 301 ACACCCTTGC CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT 361 TAGTCGATGG ATTTAATAT Predicted gene structure (within gDNA segment 12713 to 11125): Exon 1 12113 11735 ( 379 n); cDNA 1 379 ( 379 n); score: 0.995 MATCH C08HBa0235H18.1- SGN-E337746+ 0.995 379 1.000 C PGS_C08HBa0235H18.1-_SGN-E337746+ (12113 11735) Alignment (genomic DNA sequence = upper lines): TGGCCTACTT GAGATCTTCT TTTGTTTTCT TCCTTCTTGC TTTTGTGACT TACACTTATG 12054 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGCCTACTT GAGATCTTCT TTTGTTTTCT TCCTTCTTGC TTTTGTGACT TACACTTATG 60 CTGCCACTTT CGAGGTACGC AACAACTGTC CATACACCGT CTGGGCGGCG TCGACCCCAA 11994 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGCCACTTT CGAGGTACGC AACAACTGTC CATACACCGT CTGGGCGGCG TCGACCCCAA 120 TAGGCGGTGG TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA CCGAGGGGCA 11934 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGGCGGTGG TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA CCGAGGGGCA 180 CTAAGATGGC ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT GGTAGAGGTT 11874 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAAGATGGC ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT GGTAGAGGTT 240 CATGTCAGAC TGGTGATTGT GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA 11814 ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGTCATAC TGGTGATTGT GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA 300 ACACCCTGGC CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT 11754 ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACACCCTTGC CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT 360 TAGTCGATGG ATTTAATAT 11735 |||||||||| ||||||||| TAGTCGATGG ATTTAATAT 379 hqPGS_C08HBa0235H18.1-_SGN-E337746+ (12113 11735) ******************************************************************************** EST sequence 811 +strand 358 n (File: SGN-E336810+) 1 TTTTGTTCTC TTCTTCCTTC TTTGGGTGAC TTATACTTAT GCTGCCACTA TTGAGGTACG 61 CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG GTCGACGTCT 121 CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG CACGTATATG 181 GGGTCGTACT GGTTGCAACT TTAATGCTGC AAGCAGAGGT ACATGTCAGA CTGGTGATTG 241 TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG CCGAGTACGC 301 CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG GATTTAAT Predicted gene structure (within gDNA segment 13594 to 11127): Exon 1 12094 11737 ( 358 n); cDNA 1 358 ( 358 n); score: 0.902 MATCH C08HBa0235H18.1- SGN-E336810+ 0.902 358 1.000 C PGS_C08HBa0235H18.1-_SGN-E336810+ (12094 11737) Alignment (genomic DNA sequence = upper lines): TTTTGTTTTC TTCCTTCTTG CTTTTGTGAC TTACACTTAT GCTGCCACTT TCGAGGTACG 12035 ||||||| || ||| | ||| || ||||| ||| |||||| ||||||||| | |||||||| TTTTGTTCTC TTCTTCCTTC TTTGGGTGAC TTATACTTAT GCTGCCACTA TTGAGGTACG 60 CAACAACTGT CCATACACCG TCTGGGCGGC GTCGACCCCA ATAGGCGGTG GTCGACGTCT 11975 |||||||||| |||||||||| | |||||||| ||||| || |||||||||| |||||||||| CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG GTCGACGTCT 120 TGATCGAGGC CAAACATGGG TCATCAATGC ACCGAGGGGC ACTAAGATGG CACGTATATG 11915 |||||||| |||||||||| |||||||||| |||||||| |||||||||| |||||||||| CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG CACGTATATG 180 GGGTCGTACG AATTGCAACT TTGATGGTGC TGGTAGAGGT TCATGTCAGA CTGGTGATTG 11855 ||||||||| |||||||| || ||| ||| | |||||| ||||||||| |||||||||| GGGTCGTACT GGTTGCAACT TTAATGCTGC AAGCAGAGGT ACATGTCAGA CTGGTGATTG 240 TGGTGGGGTC TTGCAATGTA CCGGGTGGGG CAAACCACCA AACACCCTGG CCGAGTACGC 11795 |||||| ||| || || |||| |||| ||||| |||||| ||| |||||||| | |||||||||| TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG CCGAGTACGC 300 CTTGGACCAG TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG GATTTAAT 11737 |||||||||| ||||||||| ||||||| || |||||||||| |||||||||| |||||||| CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG GATTTAAT 358 hqPGS_C08HBa0235H18.1-_SGN-E336810+ (12094 11737) ******************************************************************************** EST sequence 904 +strand 362 n (File: SGN-E200826+) 1 TGACATCTTA TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 61 TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 121 GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 181 CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 241 CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 301 CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG 361 GA Predicted gene structure (within gDNA segment 13694 to 11133): Exon 1 12104 11743 ( 362 n); cDNA 1 362 ( 362 n); score: 0.903 MATCH C08HBa0235H18.1- SGN-E200826+ 0.903 362 1.000 C PGS_C08HBa0235H18.1-_SGN-E200826+ (12104 11743) Alignment (genomic DNA sequence = upper lines): TGAGATCTTC TTTTGTTTTC TTCCTTCTTG CTTTTGTGAC TTACACTTAT GCTGCCACTT 12045 ||| ||||| ||||||| || ||| | ||| || |||||| ||| |||||| ||||||||| TGACATCTTA TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 60 TCGAGGTACG CAACAACTGT CCATACACCG TCTGGGCGGC GTCGACCCCA ATAGGCGGTG 11985 | |||||||| |||||||||| |||||||||| | |||||||| ||||| || |||||||||| TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 120 GTCGACGTCT TGATCGAGGC CAAACATGGG TCATCAATGC ACCGAGGGGC ACTAAGATGG 11925 |||||||||| |||||||| |||||||||| |||||||||| |||||||| |||||||||| GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 180 CACGTATATG GGGTCGTACG AATTGCAACT TTGATGGTGC TGGTAGAGGT TCATGTCAGA 11865 |||||||||| ||||||||| |||||||| || ||| ||| || |||||| ||||||||| CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 240 CTGGTGATTG TGGTGGGGTC TTGCAATGTA CCGGGTGGGG CAAACCACCA AACACCCTGG 11805 |||||||||| |||||| ||| || || |||| |||| ||||| |||||| ||| |||||||| | CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 300 CCGAGTACGC CTTGGACCAG TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG 11745 |||||||||| |||||||||| ||||||||| ||||||| || |||||||||| |||||||||| CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG 360 GA 11743 || GA 362 hqPGS_C08HBa0235H18.1-_SGN-E200826+ (12104 11743) ******************************************************************************** EST sequence 801 +strand 313 n (File: SGN-E205710+) 1 TGACATCTTC TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTGTACTTAT GCTGCCACTA 61 TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 121 GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 181 CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 241 CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 301 CCGAGTACGC CTT Predicted gene structure (within gDNA segment 13694 to 10156): Exon 1 12104 11792 ( 313 n); cDNA 1 313 ( 313 n); score: 0.895 MATCH C08HBa0235H18.1- SGN-E205710+ 0.895 313 1.000 C PGS_C08HBa0235H18.1-_SGN-E205710+ (12104 11792) Alignment (genomic DNA sequence = upper lines): TGAGATCTTC TTTTGTTTTC TTCCTTCTTG CTTTTGTGAC TTACACTTAT GCTGCCACTT 12045 ||| |||||| ||||||| || ||| | ||| || |||||| || |||||| ||||||||| TGACATCTTC TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTGTACTTAT GCTGCCACTA 60 TCGAGGTACG CAACAACTGT CCATACACCG TCTGGGCGGC GTCGACCCCA ATAGGCGGTG 11985 | |||||||| |||||||||| |||||||||| | |||||||| ||||| || |||||||||| TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 120 GTCGACGTCT TGATCGAGGC CAAACATGGG TCATCAATGC ACCGAGGGGC ACTAAGATGG 11925 |||||||||| |||||||| |||||||||| |||||||||| |||||||| |||||||||| GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 180 CACGTATATG GGGTCGTACG AATTGCAACT TTGATGGTGC TGGTAGAGGT TCATGTCAGA 11865 |||||||||| ||||||||| |||||||| || ||| ||| || |||||| ||||||||| CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 240 CTGGTGATTG TGGTGGGGTC TTGCAATGTA CCGGGTGGGG CAAACCACCA AACACCCTGG 11805 |||||||||| |||||| ||| || || |||| |||| ||||| |||||| ||| |||||||| | CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 300 CCGAGTACGC CTT 11792 |||||||||| ||| CCGAGTACGC CTT 313 hqPGS_C08HBa0235H18.1-_SGN-E205710+ (12104 11792) ******************************************************************************** EST sequence 804 +strand 299 n (File: SGN-E205598+) 1 TGACATCTTC TTTTGTTCTC TTCTTCCTTC TGTGTGTGAC TGAGACTTAT GCTGCCACTA 61 TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 121 GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 181 CACGTATATG GGGTCGGACT GGATGCAACT TTAATGCTGC AAGCAGAGGT ACATGTCAGA 241 CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTA Predicted gene structure (within gDNA segment 13694 to 10269): Exon 1 12104 11807 ( 298 n); cDNA 1 298 ( 298 n); score: 0.879 MATCH C08HBa0235H18.1- SGN-E205598+ 0.879 298 0.997 C PGS_C08HBa0235H18.1-_SGN-E205598+ (12104 11807) Alignment (genomic DNA sequence = upper lines): TGAGATCTTC TTTTGTTTTC TTCCTTCTTG CTTTTGTGAC TTACACTTAT GCTGCCACTT 12045 ||| |||||| ||||||| || ||| | ||| | |||||| | | |||||| ||||||||| TGACATCTTC TTTTGTTCTC TTCTTCCTTC TGTGTGTGAC TGAGACTTAT GCTGCCACTA 60 TCGAGGTACG CAACAACTGT CCATACACCG TCTGGGCGGC GTCGACCCCA ATAGGCGGTG 11985 | |||||||| |||||||||| |||||||||| | |||||||| ||||| || |||||||||| TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 120 GTCGACGTCT TGATCGAGGC CAAACATGGG TCATCAATGC ACCGAGGGGC ACTAAGATGG 11925 |||||||||| |||||||| |||||||||| |||||||||| |||||||| |||||||||| GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 180 CACGTATATG GGGTCGTACG AATTGCAACT TTGATGGTGC TGGTAGAGGT TCATGTCAGA 11865 |||||||||| |||||| || ||||||| || ||| ||| | |||||| ||||||||| CACGTATATG GGGTCGGACT GGATGCAACT TTAATGCTGC AAGCAGAGGT ACATGTCAGA 240 CTGGTGATTG TGGTGGGGTC TTGCAATGTA CCGGGTGGGG CAAACCACCA AACACCCT 11807 |||||||||| |||||| ||| || || |||| |||| ||||| |||||| ||| |||||||| CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCT 298 hqPGS_C08HBa0235H18.1-_SGN-E205598+ (12104 11807) ******************************************************************************** EST sequence 1211 +strand 296 n (File: SGN-E209515+) 1 TTGACATCTT CTTTTGTTCT CTTCTTCCTT CTTTGTGTGA CTTATACTTA TGCTGCCACT 61 ATTGAGGTAC GCAACAACTG TCCATACACC GTTTGGGCGG CATCGACTCC GATAGGCGGT 121 GGTCGACGTC TCAATCGAGG CCAAACATGG GTCATCAATG CTCCGAGGGG AACTAACATG 181 GCACGTATAT GGGGTCGTAC TGGGTGCAAC TTTAATGCTG CAGGCAGAGG TACATGTCAG 241 ACTGGTGATT GTGGTGGAGT CTTACAGTGA ACCGGATGGG GCAAACCCCC AAACAC Predicted gene structure (within gDNA segment 13704 to 10336): Exon 1 12105 11810 ( 296 n); cDNA 1 296 ( 296 n); score: 0.885 MATCH C08HBa0235H18.1- SGN-E209515+ 0.885 296 1.000 C PGS_C08HBa0235H18.1-_SGN-E209515+ (12105 11810) Alignment (genomic DNA sequence = upper lines): TTGAGATCTT CTTTTGTTTT CTTCCTTCTT GCTTTTGTGA CTTACACTTA TGCTGCCACT 12046 |||| ||||| |||||||| | |||| | ||| || ||||| |||| ||||| |||||||||| TTGACATCTT CTTTTGTTCT CTTCTTCCTT CTTTGTGTGA CTTATACTTA TGCTGCCACT 60 TTCGAGGTAC GCAACAACTG TCCATACACC GTCTGGGCGG CGTCGACCCC AATAGGCGGT 11986 | ||||||| |||||||||| |||||||||| || ||||||| | ||||| || ||||||||| ATTGAGGTAC GCAACAACTG TCCATACACC GTTTGGGCGG CATCGACTCC GATAGGCGGT 120 GGTCGACGTC TTGATCGAGG CCAAACATGG GTCATCAATG CACCGAGGGG CACTAAGATG 11926 |||||||||| | ||||||| |||||||||| |||||||||| | |||||||| ||||| ||| GGTCGACGTC TCAATCGAGG CCAAACATGG GTCATCAATG CTCCGAGGGG AACTAACATG 180 GCACGTATAT GGGGTCGTAC GAATTGCAAC TTTGATGGTG CTGGTAGAGG TTCATGTCAG 11866 |||||||||| |||||||||| |||||| ||| ||| || | || ||||| | |||||||| GCACGTATAT GGGGTCGTAC TGGGTGCAAC TTTAATGCTG CAGGCAGAGG TACATGTCAG 240 ACTGGTGATT GTGGTGGGGT CTTGCAATGT ACCGGGTGGG GCAAACCACC AAACAC 11810 |||||||||| ||||||| || ||| || || ||||| |||| ||||||| || |||||| ACTGGTGATT GTGGTGGAGT CTTACAGTGA ACCGGATGGG GCAAACCCCC AAACAC 296 hqPGS_C08HBa0235H18.1-_SGN-E209515+ (12105 11810) ******************************************************************************** EST sequence 1218 +strand 289 n (File: SGN-E249666+) 1 TGACATCTTC TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 61 TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 121 GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 181 CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 241 CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCC Predicted gene structure (within gDNA segment 13694 to 10396): Exon 1 12104 11816 ( 289 n); cDNA 1 289 ( 289 n); score: 0.893 MATCH C08HBa0235H18.1- SGN-E249666+ 0.893 289 1.000 C PGS_C08HBa0235H18.1-_SGN-E249666+ (12104 11816) Alignment (genomic DNA sequence = upper lines): TGAGATCTTC TTTTGTTTTC TTCCTTCTTG CTTTTGTGAC TTACACTTAT GCTGCCACTT 12045 ||| |||||| ||||||| || ||| | ||| || |||||| ||| |||||| ||||||||| TGACATCTTC TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 60 TCGAGGTACG CAACAACTGT CCATACACCG TCTGGGCGGC GTCGACCCCA ATAGGCGGTG 11985 | |||||||| |||||||||| |||||||||| | |||||||| ||||| || |||||||||| TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 120 GTCGACGTCT TGATCGAGGC CAAACATGGG TCATCAATGC ACCGAGGGGC ACTAAGATGG 11925 |||||||||| |||||||| |||||||||| |||||||||| |||||||| |||||||||| GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 180 CACGTATATG GGGTCGTACG AATTGCAACT TTGATGGTGC TGGTAGAGGT TCATGTCAGA 11865 |||||||||| ||||||||| |||||||| || ||| ||| || |||||| ||||||||| CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 240 CTGGTGATTG TGGTGGGGTC TTGCAATGTA CCGGGTGGGG CAAACCACC 11816 |||||||||| |||||| ||| || || |||| |||| ||||| |||||| || CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCC 289 hqPGS_C08HBa0235H18.1-_SGN-E249666+ (12104 11816) ******************************************************************************** EST sequence 873 +strand 291 n (File: SGN-E390089+) 1 CAAACATGGG CTACTTGACA TCTTCTTTTG TTCTCTTCTT CCTTCTTTGT GTGACTTATA 61 CTTATGCTGC CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA 121 CTCCGATAGG CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA 181 GGGGAACTAA GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA 241 GAGGTACATG TCAGACTGGT GATTGTGGTG GAGTCTTACA GTGTACCGGA T Predicted gene structure (within gDNA segment 13844 to 10526): Exon 1 12119 11831 ( 289 n); cDNA 1 289 ( 289 n); score: 0.896 MATCH C08HBa0235H18.1- SGN-E390089+ 0.896 289 0.993 C PGS_C08HBa0235H18.1-_SGN-E390089+ (12119 11831) Alignment (genomic DNA sequence = upper lines): CAAACATGGC CTACTTGAGA TCTTCTTTTG TTTTCTTCCT TCTTGCTTTT GTGACTTACA 12060 ||||||||| |||||||| | |||||||||| || ||||| | ||| || | |||||||| | CAAACATGGG CTACTTGACA TCTTCTTTTG TTCTCTTCTT CCTTCTTTGT GTGACTTATA 60 CTTATGCTGC CACTTTCGAG GTACGCAACA ACTGTCCATA CACCGTCTGG GCGGCGTCGA 12000 |||||||||| |||| | ||| |||||||||| |||||||||| |||||| ||| ||||| |||| CTTATGCTGC CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA 120 CCCCAATAGG CGGTGGTCGA CGTCTTGATC GAGGCCAAAC ATGGGTCATC AATGCACCGA 11940 | || ||||| |||||||||| ||||| ||| |||||||||| |||||||||| ||||| |||| CTCCGATAGG CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA 180 GGGGCACTAA GATGGCACGT ATATGGGGTC GTACGAATTG CAACTTTGAT GGTGCTGGTA 11880 |||| ||||| |||||||||| |||||||||| |||| ||| ||||||| || | ||| || | GGGGAACTAA GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA 240 GAGGTTCATG TCAGACTGGT GATTGTGGTG GGGTCTTGCA ATGTACCGG 11831 ||||| |||| |||||||||| |||||||||| | ||||| || |||||||| GAGGTACATG TCAGACTGGT GATTGTGGTG GAGTCTTACA GTGTACCGG 289 hqPGS_C08HBa0235H18.1-_SGN-E390089+ (12119 11831) ******************************************************************************** EST sequence 625 +strand 213 n (File: SGN-E335140+) 1 AACCTGTCCA TAACCGTTTG GGCGGCATCG ACTCCGATAG GCGGTGGTCG ACGTCTCAAT 61 CGAGGCCAAA CCATGGGTCA TCAATGCTCC GAGGGGAACT AAGATGGCAC GTATATGGGG 121 TCGTACCTGG TTGCAACTTT AATGCTGCAG GCAGAGGTAC ATGTCAGACT GGTGATTGTG 181 GTGGAGTCTT ACAGTGTACC CGNCNATGGG GCA Predicted gene structure (within gDNA segment 12954 to 10426): Exon 1 12028 11833 ( 196 n); cDNA 4 200 ( 197 n); score: 0.872 MATCH C08HBa0235H18.1- SGN-E335140+ 0.872 196 0.920 C PGS_C08HBa0235H18.1-_SGN-E335140+ (12028 11833) Alignment (genomic DNA sequence = upper lines): CTGTCCATAC ACCGTCTGGG CGGCGTCGAC CCCAATAGGC GGTGGTCGAC GTCTTGATCG 11969 ||||||||| ||||| |||| |||| ||||| || |||||| |||||||||| |||| |||| CTGTCCATA- ACCGTTTGGG CGGCATCGAC TCCGATAGGC GGTGGTCGAC GTCTCAATCG 62 AGGCCAAA-C ATGGGTCATC AATGCACCGA GGGGCACTAA GATGGCACGT ATATGGGGTC 11910 |||||||| | |||||||||| ||||| |||| |||| ||||| |||||||||| |||||||||| AGGCCAAACC ATGGGTCATC AATGCTCCGA GGGGAACTAA GATGGCACGT ATATGGGGTC 122 GTA-CGAATT GCAACTTTGA TGGTGCTGGT AGAGGTTCAT GTCAGACTGG TGATTGTGGT 11851 ||| | || |||||||| | || ||| || |||||| ||| |||||||||| |||||||||| GTACCTGGTT GCAACTTTAA TGCTGCAGGC AGAGGTACAT GTCAGACTGG TGATTGTGGT 182 GGGGTCTTGC AATGTACC 11833 || ||||| | | |||||| GGAGTCTTAC AGTGTACC 200 hqPGS_C08HBa0235H18.1-_SGN-E335140+ (12028 11833) ******************************************************************************** EST sequence 649 +strand 255 n (File: SGN-E264435+) 1 TCTTTTGTTC TCTTCTTCCT TCTTTGTGTG ACTTATACTT ATGCTGCCAC TATTGAGGTA 61 CGCAACAACT GTCCATACAC CGTTTGGGCG GCATCGACTC CGATAGGCGG TGGTCGACGT 121 CTCAATCGAG GCCAAACATG GGTCATCAAT GCTCCGAGGG GAACTAAGAT GGCACGTATA 181 TGGGGTCGTA CTGGTTGCAA CTTTAATGCT GCAGGCAGAG GTACATGTCA GACTGGTGAT 241 TGTGGTGGAG TCTTA Predicted gene structure (within gDNA segment 13614 to 10656): Exon 1 12096 11843 ( 254 n); cDNA 1 254 ( 254 n); score: 0.898 MATCH C08HBa0235H18.1- SGN-E264435+ 0.898 254 0.996 C PGS_C08HBa0235H18.1-_SGN-E264435+ (12096 11843) Alignment (genomic DNA sequence = upper lines): TCTTTTGTTT TCTTCCTTCT TGCTTTTGTG ACTTACACTT ATGCTGCCAC TTTCGAGGTA 12037 ||||||||| ||||| | || | || |||| ||||| |||| |||||||||| | | |||||| TCTTTTGTTC TCTTCTTCCT TCTTTGTGTG ACTTATACTT ATGCTGCCAC TATTGAGGTA 60 CGCAACAACT GTCCATACAC CGTCTGGGCG GCGTCGACCC CAATAGGCGG TGGTCGACGT 11977 |||||||||| |||||||||| ||| |||||| || ||||| | | |||||||| |||||||||| CGCAACAACT GTCCATACAC CGTTTGGGCG GCATCGACTC CGATAGGCGG TGGTCGACGT 120 CTTGATCGAG GCCAAACATG GGTCATCAAT GCACCGAGGG GCACTAAGAT GGCACGTATA 11917 || |||||| |||||||||| |||||||||| || ||||||| | |||||||| |||||||||| CTCAATCGAG GCCAAACATG GGTCATCAAT GCTCCGAGGG GAACTAAGAT GGCACGTATA 180 TGGGGTCGTA CGAATTGCAA CTTTGATGGT GCTGGTAGAG GTTCATGTCA GACTGGTGAT 11857 |||||||||| | |||||| |||| ||| | || || |||| || ||||||| |||||||||| TGGGGTCGTA CTGGTTGCAA CTTTAATGCT GCAGGCAGAG GTACATGTCA GACTGGTGAT 240 TGTGGTGGGG TCTT 11843 |||||||| | |||| TGTGGTGGAG TCTT 254 hqPGS_C08HBa0235H18.1-_SGN-E264435+ (12096 11843) ******************************************************************************** EST sequence 848 +strand 193 n (File: SGN-E335797+) 1 CTTATGCTGC CACTTTCGAG GTACGCAACA ACTGTCCATA CACCGTCTGG GCGGCGTCGA 61 CCCCAATAGG CGGTGGTCGA CGTCTTGATC GAGGCCAAAC ATGGGTCATC AATGCACCGA 121 GGGGCACTAA GATGGCACGT ATATGGGGTC GTACGAATTG CAACTTTGAT GGTGCTGGGT 181 AGAGTTCATG TCA Predicted gene structure (within gDNA segment 12659 to 11122): Exon 1 12059 11867 ( 193 n); cDNA 1 193 ( 193 n); score: 0.982 MATCH C08HBa0235H18.1- SGN-E335797+ 0.982 193 1.000 C PGS_C08HBa0235H18.1-_SGN-E335797+ (12059 11867) Alignment (genomic DNA sequence = upper lines): CTTATGCTGC CACTTTCGAG GTACGCAACA ACTGTCCATA CACCGTCTGG GCGGCGTCGA 12000 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTATGCTGC CACTTTCGAG GTACGCAACA ACTGTCCATA CACCGTCTGG GCGGCGTCGA 60 CCCCAATAGG CGGTGGTCGA CGTCTTGATC GAGGCCAAAC ATGGGTCATC AATGCACCGA 11940 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCCAATAGG CGGTGGTCGA CGTCTTGATC GAGGCCAAAC ATGGGTCATC AATGCACCGA 120 GGGGCACTAA GATGGCACGT ATATGGGGTC GTACGAATTG CAACTTTGAT GGTGCT-GGT 11881 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| GGGGCACTAA GATGGCACGT ATATGGGGTC GTACGAATTG CAACTTTGAT GGTGCTGGGT 180 AGAGGTTCAT GTCA 11867 ||| |||||| |||| AGA-GTTCAT GTCA 193 hqPGS_C08HBa0235H18.1-_SGN-E335797+ (12059 11867) ******************************************************************************** EST sequence 726 +strand 260 n (File: SGN-E255362+) 1 GGCTGCAGGC AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTGTGTG 61 TGACGTTATA CTTATGCTGC CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG 121 GCGGCATCGA CTCCGATAGG CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC 181 AATGCTCCGA GGGGAACTAA GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT 241 GCTGCAGGCA GAGGTACATG Predicted gene structure (within gDNA segment 13944 to 10936): Exon 1 12118 11870 ( 249 n); cDNA 11 260 ( 250 n); score: 0.878 MATCH C08HBa0235H18.1- SGN-E255362+ 0.878 249 0.958 C PGS_C08HBa0235H18.1-_SGN-E255362+ (12118 11870) Alignment (genomic DNA sequence = upper lines): AAACATGGCC TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG TGAC-TTACA 12060 |||||||| | ||||||| || |||||||||| | ||||| | ||| | || |||| ||| | AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTGTGTG TGACGTTATA 70 CTTATGCTGC CACTTTCGAG GTACGCAACA ACTGTCCATA CACCGTCTGG GCGGCGTCGA 12000 |||||||||| |||| | ||| |||||||||| |||||||||| |||||| ||| ||||| |||| CTTATGCTGC CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA 130 CCCCAATAGG CGGTGGTCGA CGTCTTGATC GAGGCCAAAC ATGGGTCATC AATGCACCGA 11940 | || ||||| |||||||||| ||||| ||| |||||||||| |||||||||| ||||| |||| CTCCGATAGG CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA 190 GGGGCACTAA GATGGCACGT ATATGGGGTC GTACGAATTG CAACTTTGAT GGTGCTGGTA 11880 |||| ||||| |||||||||| |||||||||| |||| ||| ||||||| || | ||| || | GGGGAACTAA GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA 250 GAGGTTCATG 11870 ||||| |||| GAGGTACATG 260 hqPGS_C08HBa0235H18.1-_SGN-E255362+ (12118 11870) ******************************************************************************** EST sequence 870 +strand 221 n (File: SGN-E200076+) 1 TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC TTATGCTGCC 61 ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC TCCGATAGGC 121 GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG 181 ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG C Predicted gene structure (within gDNA segment 13734 to 11116): Exon 1 12108 11889 ( 220 n); cDNA 1 220 ( 220 n); score: 0.900 MATCH C08HBa0235H18.1- SGN-E200076+ 0.900 220 0.995 C PGS_C08HBa0235H18.1-_SGN-E200076+ (12108 11889) Alignment (genomic DNA sequence = upper lines): TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG TGACTTACAC TTATGCTGCC 12049 ||||||| || |||||||||| | ||||| | ||| || || ||||||| || |||||||||| TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC TTATGCTGCC 60 ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG CGGCGTCGAC CCCAATAGGC 11989 ||| | |||| |||||||||| |||||||||| ||||| |||| |||| ||||| || |||||| ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC TCCGATAGGC 120 GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG GGGCACTAAG 11929 |||||||||| |||| |||| |||||||||| |||||||||| |||| ||||| ||| |||||| GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG 180 ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG 11889 |||||||||| |||||||||| ||| |||| |||||| ||| ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG 220 hqPGS_C08HBa0235H18.1-_SGN-E200076+ (12108 11889) ******************************************************************************** EST sequence 344 +strand 449 n (File: SGN-E270562+) 1 TTTTTTTTTT TTGTTGCAAA CAATCACAAT ATGCAATTGT TTTTATCATC TAAGTCCTTT 61 GGAATATAAT GTAACAATCG ATGGATAATG TAATAGCTAT TGAAAACAAG TTATAAACTG 121 CAGTATAAAG AAATTGAAGC ACAAGACTTT CTTCTAGATG AAAATTTTTT TTAATCATAA 181 AGAACAAAAT CTCAAATTAT GTATATCACG TAACTAAACT CTAAATAAAT AATTAATTCA 241 ACGTACATTA AAATATAAAT AAGTAACTTA AATTTAAACT TTAAAATAAA ATAGAAGAGA 301 ACTCATTGCC TATTGTTTTA TCGAAAAAGG TGATTTTCGA AAAGAGTTTG TTTTTAGACT 361 TTTAGGAGTC GCCACTTAAT TTTTAAGAAA AATCAAGAAA ACTTCGTTTC TAAACAACTT 421 AAACAGAAAA ATTGTTTTGA AACATTTTA Predicted gene structure (within gDNA segment 12160 to 17371): Exon 1 13447 13493 ( 47 n); cDNA 152 197 ( 46 n); score: 0.723 Intron 1 13494 14664 (1171 n); Pd: 0.000 (s: 0.72), Pa: 0.000 (s: 0.58) Exon 2 14665 14721 ( 57 n); cDNA 198 253 ( 56 n); score: 0.579 Intron 2 14722 15938 (1217 n); Pd: 0.935 (s: 0.56), Pa: 0.000 (s: 0.58) Exon 3 15939 15987 ( 49 n); cDNA 254 302 ( 49 n); score: 0.582 Intron 3 15988 16609 ( 622 n); Pd: 0.000 (s: 0.58), Pa: 0.764 (s: 0.80) Exon 4 16610 16761 ( 152 n); cDNA 303 449 ( 147 n); score: 0.928 PPA cDNA 15 1 MATCH C08HBa0235H18.1+ SGN-E270562+ 0.833 305 0.679 C PGS_C08HBa0235H18.1+_SGN-E270562+ (13447 13493,14665 14721,15939 15987,16610 16761) Alignment (genomic DNA sequence = upper lines): TTCTAAAAGT TATTTTTTTT TTAAAAAAAA AGAACGATAA TTCAAATGCA CTGTTGTTTT 13506 ||||| | | | |||||| |||| | || ||||| | | |||||| TTCTAGATG- AAAATTTTTT TTAATCATAA AGAACAAAAT CTCAAAT... .......... 197 ATACATCTAA GACAAAAGTA CACATGAGAT GTAACTCTTA TTCCGGTCTT TAAGTTTGTT 13566 .......... .......... .......... .......... .......... .......... 197 ACGAACTCTT ATCAATAAAG TAAAAGTGAA TATTTAAAAA ACTGAGCTAT TAAGATTTTT 13626 .......... .......... .......... .......... .......... .......... 197 CATTACGGTA GAGATCAGTT GACTAATTGA GGCGATTTAA AATGAAGAAA CTCAAATTCA 13686 .......... .......... .......... .......... .......... .......... 197 CTTGGCCACT TCATCAGTAC TTGCAGGCAT CTCCAAGGGG AAATTTGGAT CAGCAACACC 13746 .......... .......... .......... .......... .......... .......... 197 ATTAGGACAA AAGACAACCC TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT 13806 .......... .......... .......... .......... .......... .......... 197 AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA 13866 .......... .......... .......... .......... .......... .......... 197 CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA 13926 .......... .......... .......... .......... .......... .......... 197 AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC 13986 .......... .......... .......... .......... .......... .......... 197 CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG 14046 .......... .......... .......... .......... .......... .......... 197 AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA 14106 .......... .......... .......... .......... .......... .......... 197 GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC 14166 .......... .......... .......... .......... .......... .......... 197 ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC 14226 .......... .......... .......... .......... .......... .......... 197 CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG ACCCATGTTT GGCCTCGATT 14286 .......... .......... .......... .......... .......... .......... 197 GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA ACGGTGTATG GACAGTTGTT 14346 .......... .......... .......... .......... .......... .......... 197 GCGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACACAA AGAAGGAAGA AGAGAACAAA 14406 .......... .......... .......... .......... .......... .......... 197 AGAAGATGTC AAGTAGCCCA TGTTTGTTGA AATGTATATA TGAGGATAAC TTATTTGAAA 14466 .......... .......... .......... .......... .......... .......... 197 GCACTTTATA TAGGGGTGTG GCGGCTTTTG GCACTATGTA TATTAATCAT AAATAACAAT 14526 .......... .......... .......... .......... .......... .......... 197 ATCATATTTG ACAAAAAACG AATAATATTA AAATACGATA TAGTAAAGTG GAGGTGAAAA 14586 .......... .......... .......... .......... .......... .......... 197 AAGAAAAAAT GTATAAGAGC CGCCTAATAA ATAATAATTT TATAAATATA GTACAAGTTC 14646 .......... .......... .......... .......... .......... .......... 197 ACTTTATTTG GTGACAACTT TGTAACGTGA CGGAACTTAT TTCTCAAAAT AAATATTATT 14706 | |||| | | || |||| | ||| || | | | | ||| .......... ........TA TGTA-TATCA CGTAACTAAA CTCTAAATAA ATAATTAATT 238 TAAAAAAAAA AAACAGCATC TTTCGTGACC AAAGTTTCTT TCTATATTTA TCAATTCCAT 14766 || | | || | CAACGTACAT TAAAA..... .......... .......... .......... .......... 253 TTTTTTTACT TTGACAGTAT TTTGTATACG TTTAAACATA AAAATTAGGT TTTTCATATT 14826 .......... .......... .......... .......... .......... .......... 253 ACTCGTATGG ATCGATTAAT TTCAAATATA CAAATCAATT CGATTAACTA TTATATACAG 14886 .......... .......... .......... .......... .......... .......... 253 TGGAAATGAT GTTTATGTGA CTCGTAATTG ATATTTTAAG CGATCAGAAT ATTTTAATGC 14946 .......... .......... .......... .......... .......... .......... 253 ATATCTATTA AGAAAATACC TATTGATGCA AAAGTCAACA AAATTATTTA ATTTATTTAT 15006 .......... .......... .......... .......... .......... .......... 253 TTTACGATCG AAGCATGAAT ACATTTACTA ATTAAAGTAA ATTGGGAGGA ATTGATGGAC 15066 .......... .......... .......... .......... .......... .......... 253 GAGTCATCAA GCTTATCAAA TGTCAATCAA CATTAAAATA ATGTTAGTTT ATGGCTGCTT 15126 .......... .......... .......... .......... .......... .......... 253 TTAAATGAAC AAGTGGATCA TGTACAATTG AGTAAAAAAT ATCTCCTATA AATATATATA 15186 .......... .......... .......... .......... .......... .......... 253 TCCCTCTAAA ACCAAATAAC ATAACACACA AATATAAACT TTAGATTCTT AAAAACAAAG 15246 .......... .......... .......... .......... .......... .......... 253 CTGAATTATA TGGAGGCAAA TAAGTCTATG GTGAAGTTGG TTGCTTTCTT GATAATTCTT 15306 .......... .......... .......... .......... .......... .......... 253 GTATCATCAT GTAATTAATT GACCATTTAT TTCTACTTTA TTAAATTTAT TCACATTTCT 15366 .......... .......... .......... .......... .......... .......... 253 TATTTTTATT TGTTAAAAGA AATTGATTAA TTATGTAAAT TATTTATGAA CAGGCTTTCA 15426 .......... .......... .......... .......... .......... .......... 253 ATCTCTCACT GCTCAAGATT TGGAAATCGA AGTTAGCGAT GGCTTAAATG TATTGCAAGT 15486 .......... .......... .......... .......... .......... .......... 253 ACATGATGTG TCTCAATCTT TTTGTCCAGG TTTGGTTTTT ATCTCTACCG TCCTTTTTGG 15546 .......... .......... .......... .......... .......... .......... 253 ATATATATAC ACGTACGACG TCCAACTAAA TCTAAATAAA TTTTTGGATC GAATCTTAGG 15606 .......... .......... .......... .......... .......... .......... 253 TCGATTATCA GGGTAATATC TATAGATTCG AGTGTTGGGG TTGAGGTCAT ATCCCAATTT 15666 .......... .......... .......... .......... .......... .......... 253 AAATGTCATG TTTCGAGTTG GGAGTTAGGG TCAGGTACTA GGTTAAATCC CATGCTCGGA 15726 .......... .......... .......... .......... .......... .......... 253 TACTGAGTCT GTTGTCGAGT TATGTCCTAA TTCACGTGTC GAAATCGAGT TCCGAATGAA 15786 .......... .......... .......... .......... .......... .......... 253 TTTTCGATCA GAAACTATTT TCCTACTCTC TAGCCAAATA TAAAAGATAT TTTCTAAAAA 15846 .......... .......... .......... .......... .......... .......... 253 ATATTTTCCT TCGTAGCAAA CACACCATAA TTAATTATTT TTTTCTCATA TAAAATAACT 15906 .......... .......... .......... .......... .......... .......... 253 TTTGATTCAT AGTTTTTTAG TCAATGCTCT TTTATAAATA A-TTAGTTGT ATTTTTTTTT 15965 |||||||| | | | || |||| || .......... .......... .......... ..TATAAATA AGTAACTTAA ATTTAAACTT 281 TATAAATTAT AGGTGTGACA AAGGAAAGTT GGCCAGAACT TCTTGGAACA CCAGCTAAGT 16025 || |||| | | || | | TA-AAATAAA ATAGAAGAGA AC........ .......... .......... .......... 302 TTGCAAAGCA AATAATTCAA AAGGAAAATC CAAAATTAAC AAATGTTGAA ACTCTACTGA 16085 .......... .......... .......... .......... .......... .......... 302 ATGGTTCAGC TTTTACAGAA GATTTGAGAT GCAATAGAGT TCGTCTTTTT GTAAATTTAT 16145 .......... .......... .......... .......... .......... .......... 302 TGGACATTGT TGTACAAACT CCCAAAGTTG GTTGAACAAA ATTAATTGAT GTTATATCAT 16205 .......... .......... .......... .......... .......... .......... 302 ATGTATCTAG CCTCCACAAA AATAAATTGG AGATGTATGG TTAAAATTTC CACTATATTT 16265 .......... .......... .......... .......... .......... .......... 302 GGTGATAAAT AAATGTGGCT TTTAATATTA ATATGATTTT TGTTATATAT ACAATTACTT 16325 .......... .......... .......... .......... .......... .......... 302 CTACTATATA CCAGTGAAAT CTCATTAGCA TTGGGAAGGT GTTACGTACG CAACCTTATC 16385 .......... .......... .......... .......... .......... .......... 302 TTATGCTAAC TATCATCAGG GCGGTCTTAA CGCTATGCAA CTAAAGGGGG GTGGGGGGTA 16445 .......... .......... .......... .......... .......... .......... 302 TTTCTAAGAA AAAATTAATT ATAAATGTTA TTTTAAAAAT AATTATATGT ACTATGAGTG 16505 .......... .......... .......... .......... .......... .......... 302 GTATGATTTC TACAAGGAAA TTGCATATAT AATGAGTATA TCATCTCAAT TGTGACTTTG 16565 .......... .......... .......... .......... .......... .......... 302 ATGAAAAGTT CTGACTTTTA AGAAAATTTT GTCTTTTATG AAAGATAGTG ACATTTGTTT 16625 | || | |||||| .......... .......... .......... .......... ....TCATTG CCTATTGTTT 318 TATCGAAAAA GGGTGGTGAT TTTCGAAAAG AGTTTGTTTT TAGACTTTTA GGAGTCGCCA 16685 |||||||||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| TATCGAAAAA ----GGTGAT TTTCGAAAAG AGTTTGTTTT TAGACTTTTA GGAGTCGCCA 374 CTTAATTTTT AAGAAAAATC AAGAAAACTT CGTTTCTAAA CAACTTAAAC AGAAAAAATT 16745 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| CTTAATTTTT AAGAAAAATC AAGAAAACTT CGTTTCTAAA CAACTTAAAC AG-AAAAATT 433 GTTTTGAAAC ATTTTA 16761 |||||||||| |||||| GTTTTGAAAC ATTTTA 449 hqPGS_C08HBa0235H18.1+_SGN-E270562+ (13447 13493,14665 14721,15939 15987,16610 16761) ******************************************************************************** EST sequence 219 +strand 654 n (File: SGN-E375346+) 1 TTTTTTTTTT TTTTTTTTTT TTTTTTTTTT TTTTTTTTTA AAAAAAAAAA AAACGAAAAT 61 TCAAATGCAC TGTTGTTTTA TACATTTAAA ACAAAAGTCC ACATGAAATG TAACTTTTAT 121 TCCGGTCTTT AAGTTTGTTA CAAACTTTTA TCAATAAAGT AAAAGGGAAT ATTTAAAAAA 181 CTGAGCTATT AAAATTTTTC ATTACGGTAA AAATCAGTTG ACTAATTGAG GGGATTTAAA 241 ATGAAAAAAC TCAAATTCAC TTGGCCACTT CATCAGTACT TGCAGGCATT TCCAAGGGGA 301 AATTTGGATC AGCAACCCCT TTAGGACAAA AGACACCCCT ATAGTTTGTA CTACCACCAG 361 GGCAAGTAAA TGTGCTTGTA GGATCGTTTT GGGGGTAGCT ATAAGCATCG GGACATTTTT 421 TTTTGAAAAA TTTGGACAAC TTTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT 481 GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC 541 ATTCACCATT TATATTGGCC GGGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG 601 TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAA Predicted gene structure (within gDNA segment 11784 to 14691): Exon 1 13456 14081 ( 626 n); cDNA 29 654 ( 626 n); score: 0.955 PPA cDNA 28 1 MATCH C08HBa0235H18.1+ SGN-E375346+ 0.955 626 0.957 C PGS_C08HBa0235H18.1+_SGN-E375346+ (13456 14081) Alignment (genomic DNA sequence = upper lines): TTATTTTTTT TTTAAAAAAA AAGAACGATA ATTCAAATGC ACTGTTGTTT TATACATCTA 13515 || ||||||| | ||||||| || ||||| | |||||||||| |||||||||| ||||||| || TTTTTTTTTT TAAAAAAAAA AAAAACGAAA ATTCAAATGC ACTGTTGTTT TATACATTTA 88 AGACAAAAGT ACACATGAGA TGTAACTCTT ATTCCGGTCT TTAAGTTTGT TACGAACTCT 13575 | |||||||| ||||||| | ||||||| || |||||||||| |||||||||| ||| |||| | AAACAAAAGT CCACATGAAA TGTAACTTTT ATTCCGGTCT TTAAGTTTGT TACAAACTTT 148 TATCAATAAA GTAAAAGTGA ATATTTAAAA AACTGAGCTA TTAAGATTTT TCATTACGGT 13635 |||||||||| ||||||| || |||||||||| |||||||||| |||| ||||| |||||||||| TATCAATAAA GTAAAAGGGA ATATTTAAAA AACTGAGCTA TTAAAATTTT TCATTACGGT 208 AGAGATCAGT TGACTAATTG AGGCGATTTA AAATGAAGAA ACTCAAATTC ACTTGGCCAC 13695 | | |||||| |||||||||| ||| |||||| ||||||| || |||||||||| |||||||||| AAAAATCAGT TGACTAATTG AGGGGATTTA AAATGAAAAA ACTCAAATTC ACTTGGCCAC 268 TTCATCAGTA CTTGCAGGCA TCTCCAAGGG GAAATTTGGA TCAGCAACAC CATTAGGACA 13755 |||||||||| |||||||||| | |||||||| |||||||||| |||||||| | | |||||||| TTCATCAGTA CTTGCAGGCA TTTCCAAGGG GAAATTTGGA TCAGCAACCC CTTTAGGACA 328 AAAGACAACC CTATAGTTTG TACTACCACC AGGGCAAGTA AATGTGCTTG TAGGATCGTC 13815 ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| AAAGACACCC CTATAGTTTG TACTACCACC AGGGCAAGTA AATGTGCTTG TAGGATCGTT 388 TTGTGGGTAG CTATAAGCAT CGGGACATCT TTTCTTGAAA AATTTGGACA ACTCTGTAGG 13875 ||| |||||| |||||||||| |||||||| | ||| |||||| |||||||||| ||| |||||| TTGGGGGTAG CTATAAGCAT CGGGACATTT TTTTTTGAAA AATTTGGACA ACTTTGTAGG 448 GCCACATGGA CCTTGGGTGC AACAATATTG TTGTCCTCCA AACGTGGTAC AAGGGTTGTT 13935 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCACATGGA CCTTGGGTGC AACAATATTG TTGTCCTCCA AACGTGGTAC AAGGGTTGTT 508 ACATCCTCCA GGTACCTTAA GGGCGCGAGG ACATTCACCA TTTATATTGG CCGTGCAATG 13995 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| ACATCCTCCA GGTACCTTAA GGGCGCGAGG ACATTCACCA TTTATATTGG CCGGGCAATG 568 AATTGCGTGA CATTTTCCTC CACTAGGTTT TGTTGGGGCA AAAGTCATTG GAATATTAAA 14055 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTGCGTGA CATTTTCCTC CACTAGGTTT TGTTGGGGCA AAAGTCATTG GAATATTAAA 628 TCCATCGACT AAAGAAATGT CCCAAA 14081 |||||||||| |||||||||| |||||| TCCATCGACT AAAGAAATGT CCCAAA 654 hqPGS_C08HBa0235H18.1+_SGN-E375346+ (13456 14081) ******************************************************************************** EST sequence 75 +strand 781 n (File: SGN-E538598+) 1 TTTTTTTTTT TTTTTTTTTT TTTTTTTTTT TTTTTTTTTA ATTCAAATGC ACTGGTTGTT 61 TTATACATCT AAGACAAAAG TACACATGGA GATGTAACTC TTATTCCGGT CTTTAAGTTT 121 GTTACGAACT CTTATCAATA AAGTAAAAGT GAATATTTAA AAAACTGAGC TATTAAGATT 181 TTTCATTACG GGAGAGATCA GTTGACTAAT TGAGGCGATT TAAAATGAAG AAACTCAAAT 241 TCACTTGGCC ACTTCATCAG TACTTGCAGG CATCTCCAAG GGGAAATTTG GATCAGCAAC 301 ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT 361 TGTAGGATCG TCTTGGGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA 421 CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT 481 ACAAGGGTTG TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT 541 GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT 601 TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC 661 CAAGGCGTAC TCGGCTAGGG TGTTTTGGGG GTTTGCCCCA TCCGGTACAC TGTAAGACTC 721 CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG CAACCAGTAC 781 G Predicted gene structure (within gDNA segment 12504 to 14833): Exon 1 13484 14223 ( 740 n); cDNA 39 781 ( 743 n); score: 0.987 PPA cDNA 38 1 MATCH C08HBa0235H18.1+ SGN-E538598+ 0.987 740 0.948 C PGS_C08HBa0235H18.1+_SGN-E538598+ (13484 14223) Alignment (genomic DNA sequence = upper lines): TAATTCAAAT GCACT-GTTG TTTTATACAT CTAAGACAAA AGTACACAT- GAGATGTAAC 13541 |||||||||| ||||| |||| |||||||||| |||||||||| ||||||||| |||||||||| TAATTCAAAT GCACTGGTTG TTTTATACAT CTAAGACAAA AGTACACATG GAGATGTAAC 98 TCTTATTCCG GTCTTTAAGT TTGTTACGAA CTCTTATCAA TAAAGTAAAA GTGAATATTT 13601 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTATTCCG GTCTTTAAGT TTGTTACGAA CTCTTATCAA TAAAGTAAAA GTGAATATTT 158 AAAAAACTGA GCTATTAAGA TTTTTCATTA CGGTAGAGAT CAGTTGACTA ATTGAGGCGA 13661 |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| AAAAAACTGA GCTATTAAGA TTTTTCATTA CGGGAGAGAT CAGTTGACTA ATTGAGGCGA 218 TTTAAAATGA AGAAACTCAA ATTCACTTGG CCACTTCATC AGTACTTGCA GGCATCTCCA 13721 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTAAAATGA AGAAACTCAA ATTCACTTGG CCACTTCATC AGTACTTGCA GGCATCTCCA 278 AGGGGAAATT TGGATCAGCA ACACCATTAG GACAAAAGAC AACCCTATAG TTTGTACTAC 13781 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGGAAATT TGGATCAGCA ACACCATTAG GACAAAAGAC AACCCTATAG TTTGTACTAC 338 CACCAGGGCA AGTAAATGTG CTTGTAGGAT CGTCTTGTGG GTAGCTATAA GCATCGGGAC 13841 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| CACCAGGGCA AGTAAATGTG CTTGTAGGAT CGTCTTGGGG GTAGCTATAA GCATCGGGAC 398 ATCTTTTCTT GAAAAATTTG GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT 13901 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCTTTTCTT GAAAAATTTG GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT 458 ATTGTTGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC 13961 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGTTGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC 518 GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT CCTCCACTAG 14021 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT CCTCCACTAG 578 GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA ATGTCCCAAA 14081 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA ATGTCCCAAA 638 AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTG-TTTGG GGGTTTGCCC 14140 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTTGG GGGTTTGCCC 698 CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 14200 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 758 GCATTAAAGT TGCAACCAGT ACG 14223 |||||||||| |||||||||| ||| GCATTAAAGT TGCAACCAGT ACG 781 hqPGS_C08HBa0235H18.1+_SGN-E538598+ (13484 14223) ******************************************************************************** EST sequence 100 +strand 671 n (File: SGN-E213158+) 1 GAGAACTAGT CTCGAGTTTT TTTTTTTTTT TTTTTTTTTT TAATTCAAAT GCACTGTTGT 61 TTTATACATC TAAGACAAAA GTACACATGA GATGTAACTC TTATTCCGGT CTTTAAGTTT 121 GTTACGAACT CTTATCAATA AAGTAAAAGT GAATATTTAA AAAACTGAGC TATTAAGATT 181 TTTCATTACG GTAGAGATCA GTTGACTAAT TGAGGCGATT TAAAATGAAG AAACTCAAAT 241 TCACTTGGCC ACTTCATCAG TACTTGCAGG CATCTCCAAG GGGAAATTTG GATCAGCAAC 301 ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT 361 TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA 421 CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT 481 ACAAGGGTTG TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT 541 GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT 601 TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC 661 CAAGGCGTAC T Predicted gene structure (within gDNA segment 12484 to 14724): Exon 1 13484 14114 ( 631 n); cDNA 41 671 ( 631 n); score: 1.000 PPA cDNA 40 16 MATCH C08HBa0235H18.1+ SGN-E213158+ 1.000 631 0.940 C PGS_C08HBa0235H18.1+_SGN-E213158+ (13484 14114) Alignment (genomic DNA sequence = upper lines): TAATTCAAAT GCACTGTTGT TTTATACATC TAAGACAAAA GTACACATGA GATGTAACTC 13543 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATTCAAAT GCACTGTTGT TTTATACATC TAAGACAAAA GTACACATGA GATGTAACTC 100 TTATTCCGGT CTTTAAGTTT GTTACGAACT CTTATCAATA AAGTAAAAGT GAATATTTAA 13603 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTATTCCGGT CTTTAAGTTT GTTACGAACT CTTATCAATA AAGTAAAAGT GAATATTTAA 160 AAAACTGAGC TATTAAGATT TTTCATTACG GTAGAGATCA GTTGACTAAT TGAGGCGATT 13663 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAACTGAGC TATTAAGATT TTTCATTACG GTAGAGATCA GTTGACTAAT TGAGGCGATT 220 TAAAATGAAG AAACTCAAAT TCACTTGGCC ACTTCATCAG TACTTGCAGG CATCTCCAAG 13723 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAATGAAG AAACTCAAAT TCACTTGGCC ACTTCATCAG TACTTGCAGG CATCTCCAAG 280 GGGAAATTTG GATCAGCAAC ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA 13783 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGAAATTTG GATCAGCAAC ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA 340 CCAGGGCAAG TAAATGTGCT TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT 13843 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAGGGCAAG TAAATGTGCT TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT 400 CTTTTCTTGA AAAATTTGGA CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT 13903 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTTCTTGA AAAATTTGGA CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT 460 TGTTGTCCTC CAAACGTGGT ACAAGGGTTG TTACATCCTC CAGGTACCTT AAGGGCGCGA 13963 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTGTCCTC CAAACGTGGT ACAAGGGTTG TTACATCCTC CAGGTACCTT AAGGGCGCGA 520 GGACATTCAC CATTTATATT GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT 14023 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGACATTCAC CATTTATATT GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT 580 TTTGTTGGGG CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA 14083 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGTTGGGG CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA 640 TCTAAGTTGC TAAACTGGTC CAAGGCGTAC T 14114 |||||||||| |||||||||| |||||||||| | TCTAAGTTGC TAAACTGGTC CAAGGCGTAC T 671 hqPGS_C08HBa0235H18.1+_SGN-E213158+ (13484 14114) ******************************************************************************** EST sequence 908 -strand 633 n (File: SGN-E274599-) 1 TTTTTTTTTT AATTCAAATG CACTGTTGTT TTATACATCT AAGACAAAAG TACACATGAG 61 ATGTAACTCT TATTCCGGTC TTTAAGTTTG TTACGAACTC TTATCAATAA AGTAAAAGTG 121 AATATTTAAA AAACTGAGCT ATTAAGATTT TTCATTACGG TAGAGATCAG TTGACTAATT 181 GAGGCGATTT AAAATGAAGA AACTCAAATT CACTTGGCCA CTTCATCAGT ACTTGCAGGC 241 ATCTCCAAGG GGAAATTTGG ATCAGCAACA CCATTAGGAC AAAAGACAAC CCTATAGTTT 301 GTACTACCAC CAGGGCAAGT AAATGTGCTT GTAGGATCGT CTTGTGGGTA GCTATAAGCA 361 TCGGGACATC TTTTCTTGAA AAATTTGGAC AACTCTGTAG GGCCACATGG ACCTTGGGTG 421 CAACAATATT GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA 481 AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 541 CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 601 TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAG Predicted gene structure (within gDNA segment 12784 to 14707): Exon 1 13484 14107 ( 624 n); cDNA 10 633 ( 624 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E274599- 1.000 624 0.986 C PGS_C08HBa0235H18.1+_SGN-E274599- (13484 14107) Alignment (genomic DNA sequence = upper lines): TAATTCAAAT GCACTGTTGT TTTATACATC TAAGACAAAA GTACACATGA GATGTAACTC 13543 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATTCAAAT GCACTGTTGT TTTATACATC TAAGACAAAA GTACACATGA GATGTAACTC 69 TTATTCCGGT CTTTAAGTTT GTTACGAACT CTTATCAATA AAGTAAAAGT GAATATTTAA 13603 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTATTCCGGT CTTTAAGTTT GTTACGAACT CTTATCAATA AAGTAAAAGT GAATATTTAA 129 AAAACTGAGC TATTAAGATT TTTCATTACG GTAGAGATCA GTTGACTAAT TGAGGCGATT 13663 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAACTGAGC TATTAAGATT TTTCATTACG GTAGAGATCA GTTGACTAAT TGAGGCGATT 189 TAAAATGAAG AAACTCAAAT TCACTTGGCC ACTTCATCAG TACTTGCAGG CATCTCCAAG 13723 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAATGAAG AAACTCAAAT TCACTTGGCC ACTTCATCAG TACTTGCAGG CATCTCCAAG 249 GGGAAATTTG GATCAGCAAC ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA 13783 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGAAATTTG GATCAGCAAC ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA 309 CCAGGGCAAG TAAATGTGCT TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT 13843 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAGGGCAAG TAAATGTGCT TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT 369 CTTTTCTTGA AAAATTTGGA CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT 13903 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTTCTTGA AAAATTTGGA CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT 429 TGTTGTCCTC CAAACGTGGT ACAAGGGTTG TTACATCCTC CAGGTACCTT AAGGGCGCGA 13963 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTGTCCTC CAAACGTGGT ACAAGGGTTG TTACATCCTC CAGGTACCTT AAGGGCGCGA 489 GGACATTCAC CATTTATATT GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT 14023 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGACATTCAC CATTTATATT GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT 549 TTTGTTGGGG CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA 14083 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGTTGGGG CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA 609 TCTAAGTTGC TAAACTGGTC CAAG 14107 |||||||||| |||||||||| |||| TCTAAGTTGC TAAACTGGTC CAAG 633 hqPGS_C08HBa0235H18.1+_SGN-E274599- (13484 14107) ******************************************************************************** EST sequence 784 -strand 589 n (File: SGN-E254748-) 1 TTTTTTTTTT TTTNTTTTTN TTTTTTTTTN TTTAATTCAA ATGCACTGTT GTTTTATACA 61 TCTAAGACAA AAGTACACAT GAGATGTAAC TCTTATTCCG GTCTTTAAGT TTGTTACGAA 121 CTCTTATCAA TAAAGTAAAA GTGAATATTT AAAAAACTGA GCTATTAAGA TTTTTCATTA 181 CGGTAGAGAT CAGTTGACTA ATTGAGGCGA TTTAAAATGA AGAAACTCAA ATTCACTTGG 241 CCACTTCATC AGTACTTGCA GGCATCTCCA AGGGGAAATT TGGATCAGCA ACACCATTAG 301 GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA AGTAAATGTG CTTGTAGGAT 361 CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG GACAACTCTG 421 TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT 481 TGTTACATCC TCCAGGTACT TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC 541 AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGT Predicted gene structure (within gDNA segment 12554 to 14640): Exon 1 13484 14040 ( 557 n); cDNA 33 589 ( 557 n); score: 0.998 PPA cDNA 32 21 MATCH C08HBa0235H18.1+ SGN-E254748- 0.998 557 0.946 C PGS_C08HBa0235H18.1+_SGN-E254748- (13484 14040) Alignment (genomic DNA sequence = upper lines): TAATTCAAAT GCACTGTTGT TTTATACATC TAAGACAAAA GTACACATGA GATGTAACTC 13543 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATTCAAAT GCACTGTTGT TTTATACATC TAAGACAAAA GTACACATGA GATGTAACTC 92 TTATTCCGGT CTTTAAGTTT GTTACGAACT CTTATCAATA AAGTAAAAGT GAATATTTAA 13603 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTATTCCGGT CTTTAAGTTT GTTACGAACT CTTATCAATA AAGTAAAAGT GAATATTTAA 152 AAAACTGAGC TATTAAGATT TTTCATTACG GTAGAGATCA GTTGACTAAT TGAGGCGATT 13663 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAACTGAGC TATTAAGATT TTTCATTACG GTAGAGATCA GTTGACTAAT TGAGGCGATT 212 TAAAATGAAG AAACTCAAAT TCACTTGGCC ACTTCATCAG TACTTGCAGG CATCTCCAAG 13723 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAATGAAG AAACTCAAAT TCACTTGGCC ACTTCATCAG TACTTGCAGG CATCTCCAAG 272 GGGAAATTTG GATCAGCAAC ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA 13783 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGAAATTTG GATCAGCAAC ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA 332 CCAGGGCAAG TAAATGTGCT TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT 13843 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAGGGCAAG TAAATGTGCT TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT 392 CTTTTCTTGA AAAATTTGGA CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT 13903 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTTCTTGA AAAATTTGGA CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT 452 TGTTGTCCTC CAAACGTGGT ACAAGGGTTG TTACATCCTC CAGGTACCTT AAGGGCGCGA 13963 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| TGTTGTCCTC CAAACGTGGT ACAAGGGTTG TTACATCCTC CAGGTACTTT AAGGGCGCGA 512 GGACATTCAC CATTTATATT GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT 14023 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGACATTCAC CATTTATATT GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT 572 TTTGTTGGGG CAAAAGT 14040 |||||||||| ||||||| TTTGTTGGGG CAAAAGT 589 hqPGS_C08HBa0235H18.1+_SGN-E254748- (13484 14040) ******************************************************************************** EST sequence 1114 -strand 406 n (File: SGN-E357088-) 1 TTTTTTTTTT TTAATTCAAA TGCACTGTTG TTTTATACAT CTAAGACAAA AGTACACATG 61 AGATGTAACT CTTATTCCGG TCTTTAAGTT TGTTACGAAC TCTTATCAAT AAAGTAAAAG 121 TGAATATTTA AAAAACTGAG CTATTAAGAT TTTTCATTAC GGTAGAGATC AGTTGACTAA 181 TTGAGGCGAT TTAAAATGAA GAAACTCAAA TTCACTTGGC CACTTCATCA GTACTTGCAG 241 GCATCTCCAA GGGGAAATTT GGATCAGCAA CACCATTAGG ACAAAAGACA ACCCTATAGT 301 TTGTACTACC ACCAGGGCAA GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG 361 CATCGGGACA TCTTTTCTTG AAAAATTTGG ACAACTCTGT AGGGCC Predicted gene structure (within gDNA segment 12764 to 14478): Exon 1 13484 13878 ( 395 n); cDNA 12 406 ( 395 n); score: 1.000 PPA cDNA 11 1 MATCH C08HBa0235H18.1+ SGN-E357088- 1.000 395 0.973 C PGS_C08HBa0235H18.1+_SGN-E357088- (13484 13878) Alignment (genomic DNA sequence = upper lines): TAATTCAAAT GCACTGTTGT TTTATACATC TAAGACAAAA GTACACATGA GATGTAACTC 13543 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATTCAAAT GCACTGTTGT TTTATACATC TAAGACAAAA GTACACATGA GATGTAACTC 71 TTATTCCGGT CTTTAAGTTT GTTACGAACT CTTATCAATA AAGTAAAAGT GAATATTTAA 13603 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTATTCCGGT CTTTAAGTTT GTTACGAACT CTTATCAATA AAGTAAAAGT GAATATTTAA 131 AAAACTGAGC TATTAAGATT TTTCATTACG GTAGAGATCA GTTGACTAAT TGAGGCGATT 13663 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAACTGAGC TATTAAGATT TTTCATTACG GTAGAGATCA GTTGACTAAT TGAGGCGATT 191 TAAAATGAAG AAACTCAAAT TCACTTGGCC ACTTCATCAG TACTTGCAGG CATCTCCAAG 13723 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAATGAAG AAACTCAAAT TCACTTGGCC ACTTCATCAG TACTTGCAGG CATCTCCAAG 251 GGGAAATTTG GATCAGCAAC ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA 13783 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGAAATTTG GATCAGCAAC ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA 311 CCAGGGCAAG TAAATGTGCT TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT 13843 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAGGGCAAG TAAATGTGCT TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT 371 CTTTTCTTGA AAAATTTGGA CAACTCTGTA GGGCC 13878 |||||||||| |||||||||| |||||||||| ||||| CTTTTCTTGA AAAATTTGGA CAACTCTGTA GGGCC 406 hqPGS_C08HBa0235H18.1+_SGN-E357088- (13484 13878) ******************************************************************************** EST sequence 790 -strand 380 n (File: SGN-E353933-) 1 TTTTTTTTTT TTTTTTTTTA ATTCAAATGC ACTGTTGTTT TATACATCTA AGACAAAAGT 61 ACACATGAGA TGTAACTCTT ATTCCGGTCT TTAAGTTTGT TACGAACTCT TATCAATAAA 121 GTAAAAGTGA ATATTTAAAA AACTGAGCTA TTAAGATTTT TCATTACGGT AGAGATCAGT 181 TGACTAATTG AGGCGATTTA AAATGAAGAA ACTCAAATTC ACTTGGCCAC TTCATCAGTA 241 CTTGCAGGCA TCTCCAAGGG GAAATTTGGA TCAGCAACAC CATTAGGACA AAAGACAACC 301 CTATAGTTTG TACTACCACC AGGGCAAGTA AATGTGCTTG TAGGATCGTC TTGTGGGTAG 361 CTATAAGCAT CGGGACATCT Predicted gene structure (within gDNA segment 12694 to 14445): Exon 1 13484 13845 ( 362 n); cDNA 19 380 ( 362 n); score: 1.000 PPA cDNA 18 1 MATCH C08HBa0235H18.1+ SGN-E353933- 1.000 362 0.953 C PGS_C08HBa0235H18.1+_SGN-E353933- (13484 13845) Alignment (genomic DNA sequence = upper lines): TAATTCAAAT GCACTGTTGT TTTATACATC TAAGACAAAA GTACACATGA GATGTAACTC 13543 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATTCAAAT GCACTGTTGT TTTATACATC TAAGACAAAA GTACACATGA GATGTAACTC 78 TTATTCCGGT CTTTAAGTTT GTTACGAACT CTTATCAATA AAGTAAAAGT GAATATTTAA 13603 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTATTCCGGT CTTTAAGTTT GTTACGAACT CTTATCAATA AAGTAAAAGT GAATATTTAA 138 AAAACTGAGC TATTAAGATT TTTCATTACG GTAGAGATCA GTTGACTAAT TGAGGCGATT 13663 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAACTGAGC TATTAAGATT TTTCATTACG GTAGAGATCA GTTGACTAAT TGAGGCGATT 198 TAAAATGAAG AAACTCAAAT TCACTTGGCC ACTTCATCAG TACTTGCAGG CATCTCCAAG 13723 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAATGAAG AAACTCAAAT TCACTTGGCC ACTTCATCAG TACTTGCAGG CATCTCCAAG 258 GGGAAATTTG GATCAGCAAC ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA 13783 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGAAATTTG GATCAGCAAC ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA 318 CCAGGGCAAG TAAATGTGCT TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT 13843 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAGGGCAAG TAAATGTGCT TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT 378 CT 13845 || CT 380 hqPGS_C08HBa0235H18.1+_SGN-E353933- (13484 13845) ******************************************************************************** EST sequence 919 -strand 736 n (File: SGN-E353136-) 1 TTTCAAATGC ACTGTTGTTT TATACATCTA AGACAAAAGT ACACATGAGA TGTAACTCTT 61 ATTCCGGTCT TTAAGTTTGT TACGAACTCT TATCAATAAA GTAAAAGTGA ATATTTAAAA 121 AACTGAGCTA TTAAGATTTT TCATTACGGT AGAGATCAGT TGACTAATTG AGGCGATTTA 181 AAATGAAGAA ACTCAAATTC ACTTGGCCAC TTCATCAGTA CTTGCAGGCA TCTCCAAGGG 241 GAAATTTGGA TCAGCAACAC CATTAGGACA AAAGACAACC CTATAGTTTG TACTACCACC 301 AGGGCAAGTA AATGTGCTTG TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT 361 TTTCTTGAAA AATTTGGACA ACTCTGTAGG GCCACATGGA CCTTGGGTGC AACAATATTG 421 TTGTCCTCCA AACGTGGTAC AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG 481 ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT 541 TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC 601 TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC 661 GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 721 AAAGTTGCAA CCAGTG Predicted gene structure (within gDNA segment 12867 to 14830): Exon 1 13487 14220 ( 734 n); cDNA 2 735 ( 734 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E353136- 1.000 734 0.997 C PGS_C08HBa0235H18.1+_SGN-E353136- (13487 14220) Alignment (genomic DNA sequence = upper lines): TTCAAATGCA CTGTTGTTTT ATACATCTAA GACAAAAGTA CACATGAGAT GTAACTCTTA 13546 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCAAATGCA CTGTTGTTTT ATACATCTAA GACAAAAGTA CACATGAGAT GTAACTCTTA 61 TTCCGGTCTT TAAGTTTGTT ACGAACTCTT ATCAATAAAG TAAAAGTGAA TATTTAAAAA 13606 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCGGTCTT TAAGTTTGTT ACGAACTCTT ATCAATAAAG TAAAAGTGAA TATTTAAAAA 121 ACTGAGCTAT TAAGATTTTT CATTACGGTA GAGATCAGTT GACTAATTGA GGCGATTTAA 13666 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTGAGCTAT TAAGATTTTT CATTACGGTA GAGATCAGTT GACTAATTGA GGCGATTTAA 181 AATGAAGAAA CTCAAATTCA CTTGGCCACT TCATCAGTAC TTGCAGGCAT CTCCAAGGGG 13726 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGAAGAAA CTCAAATTCA CTTGGCCACT TCATCAGTAC TTGCAGGCAT CTCCAAGGGG 241 AAATTTGGAT CAGCAACACC ATTAGGACAA AAGACAACCC TATAGTTTGT ACTACCACCA 13786 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATTTGGAT CAGCAACACC ATTAGGACAA AAGACAACCC TATAGTTTGT ACTACCACCA 301 GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 13846 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 361 TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 13906 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 421 TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 13966 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 481 CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 14026 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 541 GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 14086 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 601 AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 14146 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 661 GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 14206 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 721 AAGTTGCAAC CAGT 14220 |||||||||| |||| AAGTTGCAAC CAGT 735 hqPGS_C08HBa0235H18.1+_SGN-E353136- (13487 14220) ******************************************************************************** EST sequence 1183 -strand 679 n (File: SGN-E357805-) 1 TTTTTTTTTC AAATGCACTG TGTTTTATAC ATCTAAGACA AAAGTACACA TGAGATGTAC 61 TCTTTATTCC GGTCTTTAAG TTTGTTACGA CTTCTTATCA ATAAAGTAAA AGTGAATATT 121 TAAAAAACTG AGCTATTAAG ATTTTTCATT ACGGTAGAGA TCAGTTGACT AATTGAGGCG 181 ATTTAAAATG AAGAAACTCA AATTCACTTG GCCACTTCAT CAGTACTTGC AGGCATCTCC 241 AAGGGGAAAT TTGGATCAGC AACACCATTA GGACAAAAGA CAACCCTATA GTTTGTACTA 301 CCACCAGGGC AAGTAAATGT GCTTGTAGGA TCGTCTTGTG GGTAGCTATA AGCATCGGGA 361 CATCTTTTCT TGAAAAATTT GGACAACTCT GTAGGGCCAC ATGGACCTTG GGTGCAACAA 421 TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 481 CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 541 GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 601 AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 661 CATCCGGTAC ACTGTAAGA Predicted gene structure (within gDNA segment 12691 to 14759): Exon 1 13487 14159 ( 673 n); cDNA 8 679 ( 672 n); score: 0.990 MATCH C08HBa0235H18.1+ SGN-E357805- 0.990 673 0.991 C PGS_C08HBa0235H18.1+_SGN-E357805- (13487 14159) Alignment (genomic DNA sequence = upper lines): TTCAAATGCA CTGTTGTTTT ATACATCTAA GACAAAAGTA CACATGAGAT GTAACTCTTA 13546 |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| ||| ||| TTCAAATGCA CTG-TGTTTT ATACATCTAA GACAAAAGTA CACATGAGAT GTACTCTTTA 66 TTCCGGTCTT TAAGTTTGTT ACGAACTCTT ATCAATAAAG TAAAAGTGAA TATTTAAAAA 13606 |||||||||| |||||||||| |||| |||| |||||||||| |||||||||| |||||||||| TTCCGGTCTT TAAGTTTGTT ACGACTTCTT ATCAATAAAG TAAAAGTGAA TATTTAAAAA 126 ACTGAGCTAT TAAGATTTTT CATTACGGTA GAGATCAGTT GACTAATTGA GGCGATTTAA 13666 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTGAGCTAT TAAGATTTTT CATTACGGTA GAGATCAGTT GACTAATTGA GGCGATTTAA 186 AATGAAGAAA CTCAAATTCA CTTGGCCACT TCATCAGTAC TTGCAGGCAT CTCCAAGGGG 13726 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGAAGAAA CTCAAATTCA CTTGGCCACT TCATCAGTAC TTGCAGGCAT CTCCAAGGGG 246 AAATTTGGAT CAGCAACACC ATTAGGACAA AAGACAACCC TATAGTTTGT ACTACCACCA 13786 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATTTGGAT CAGCAACACC ATTAGGACAA AAGACAACCC TATAGTTTGT ACTACCACCA 306 GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 13846 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 366 TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 13906 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 426 TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 13966 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 486 CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 14026 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 546 GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 14086 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 606 AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 14146 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 666 GTACACTGTA AGA 14159 |||||||||| ||| GTACACTGTA AGA 679 hqPGS_C08HBa0235H18.1+_SGN-E357805- (13487 14159) ******************************************************************************** EST sequence 1082 -strand 591 n (File: SGN-E356290-) 1 TTTTTTTTTT TCAAATGCAC TGTTGTTTTA TACATCTAAG ACAAAAGTAC ACATGAGATG 61 TAACTCTTAT TCCGGTCTTT AAGTTTGTTA CGAACTCTTA TCAATAAAGT AAAAGTGAAT 121 ATTTAAAAAA CTGAGCTATT AAGATTTTTC ATTACGGTAG AGATCAGTTG ACTAATTGAG 181 GCGATTTAAA ATGAAGAAAC TCAAATTCAC TTGGCCACTT CATCAGTACT TGCAGGCATC 241 TCCAAGGGGA AATTTGGATC AGCAACACCA TTAGGACAAA AGACAACCCT ATAGTTTGTA 301 CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT ATAAGCATCG 361 GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC TTGGGTGCAA 421 CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG 481 GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA 541 CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA A Predicted gene structure (within gDNA segment 12787 to 14668): Exon 1 13487 14068 ( 582 n); cDNA 10 591 ( 582 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E356290- 1.000 582 0.985 C PGS_C08HBa0235H18.1+_SGN-E356290- (13487 14068) Alignment (genomic DNA sequence = upper lines): TTCAAATGCA CTGTTGTTTT ATACATCTAA GACAAAAGTA CACATGAGAT GTAACTCTTA 13546 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCAAATGCA CTGTTGTTTT ATACATCTAA GACAAAAGTA CACATGAGAT GTAACTCTTA 69 TTCCGGTCTT TAAGTTTGTT ACGAACTCTT ATCAATAAAG TAAAAGTGAA TATTTAAAAA 13606 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCGGTCTT TAAGTTTGTT ACGAACTCTT ATCAATAAAG TAAAAGTGAA TATTTAAAAA 129 ACTGAGCTAT TAAGATTTTT CATTACGGTA GAGATCAGTT GACTAATTGA GGCGATTTAA 13666 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTGAGCTAT TAAGATTTTT CATTACGGTA GAGATCAGTT GACTAATTGA GGCGATTTAA 189 AATGAAGAAA CTCAAATTCA CTTGGCCACT TCATCAGTAC TTGCAGGCAT CTCCAAGGGG 13726 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGAAGAAA CTCAAATTCA CTTGGCCACT TCATCAGTAC TTGCAGGCAT CTCCAAGGGG 249 AAATTTGGAT CAGCAACACC ATTAGGACAA AAGACAACCC TATAGTTTGT ACTACCACCA 13786 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATTTGGAT CAGCAACACC ATTAGGACAA AAGACAACCC TATAGTTTGT ACTACCACCA 309 GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 13846 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 369 TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 13906 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 429 TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 13966 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 489 CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 14026 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 549 GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AA 14068 |||||||||| |||||||||| |||||||||| |||||||||| || GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AA 591 hqPGS_C08HBa0235H18.1+_SGN-E356290- (13487 14068) ******************************************************************************** EST sequence 477 -strand 592 n (File: SGN-E351033-) 1 TTTTTTTTTT TTCAAATGCA CTGTTGTTTT ATACATCTAA GACAAAAGTA CACATGAGAT 61 GTAACTCTTA TTCCGGTCTT TAAGTTTGTT ACGAACTCTT ATCAATAAAG TAAAAGTGAA 121 TATTTAAAAA ACTGAGCTAT TAAGATTTTT CATTACGGTA GAGATCAGTT GACTAATTGA 181 GGCGATTTAA AATGAAGAAA CTCAAATTCA CTTGGCCACT TCATCAGTAC TTGCAGGCAT 241 CTCCAAGGGG AAATTTGGAT CAGCAACACC ATTAGGACAA AAGACAACCC TATAGTTTGT 301 ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC 361 GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA 421 ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG 481 GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC 541 ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AA Predicted gene structure (within gDNA segment 12777 to 14668): Exon 1 13407 13416 ( 10 n); cDNA 1 10 ( 10 n); score: 0.900 Intron 1 13417 13486 ( 70 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 1.00) Exon 2 13487 14068 ( 582 n); cDNA 11 592 ( 582 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E351033- 1.000 592 1.000 C PGS_C08HBa0235H18.1+_SGN-E351033- (13407 13416,13487 14068) Alignment (genomic DNA sequence = upper lines): TTTTTTGTTT GTTTATTGGT CTAATTTAGG CTTAATACTT TTCTAAAAGT TATTTTTTTT 13466 |||||| ||| TTTTTTTTTT .......... .......... .......... .......... .......... 10 TTAAAAAAAA AGAACGATAA TTCAAATGCA CTGTTGTTTT ATACATCTAA GACAAAAGTA 13526 |||||||||| |||||||||| |||||||||| |||||||||| .......... .......... TTCAAATGCA CTGTTGTTTT ATACATCTAA GACAAAAGTA 50 CACATGAGAT GTAACTCTTA TTCCGGTCTT TAAGTTTGTT ACGAACTCTT ATCAATAAAG 13586 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACATGAGAT GTAACTCTTA TTCCGGTCTT TAAGTTTGTT ACGAACTCTT ATCAATAAAG 110 TAAAAGTGAA TATTTAAAAA ACTGAGCTAT TAAGATTTTT CATTACGGTA GAGATCAGTT 13646 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAAGTGAA TATTTAAAAA ACTGAGCTAT TAAGATTTTT CATTACGGTA GAGATCAGTT 170 GACTAATTGA GGCGATTTAA AATGAAGAAA CTCAAATTCA CTTGGCCACT TCATCAGTAC 13706 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACTAATTGA GGCGATTTAA AATGAAGAAA CTCAAATTCA CTTGGCCACT TCATCAGTAC 230 TTGCAGGCAT CTCCAAGGGG AAATTTGGAT CAGCAACACC ATTAGGACAA AAGACAACCC 13766 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCAGGCAT CTCCAAGGGG AAATTTGGAT CAGCAACACC ATTAGGACAA AAGACAACCC 290 TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 13826 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 350 TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 13886 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 410 CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 13946 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 470 GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 14006 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 530 ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 14066 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 590 AA 14068 || AA 592 hqPGS_C08HBa0235H18.1+_SGN-E351033- (13487 14068) ******************************************************************************** EST sequence 862 -strand 555 n (File: SGN-E214114-) 1 TTTTTTTTTT TTTTTTCAAA TGCACTGTTG TTTTATACAT CTAAGACAAA AGTACACATG 61 AGATGTAACT CTTATTCCGG TCTTTAAGTT TGTTACGAAC TCTTATCAAT AAAGTAAAAG 121 TGAATATTTA AAAAACTGAG CTATTAAGAT TTTTCATTAC GGTAGAGATC AGTTGACTAA 181 TTGAGGCGAT TTAAAATGAA GAAACTCAAA TTCACTTGGC CACTTCATCA GTACTTGCAG 241 GCATCTCCAA GGGGAAATTT GGATCAGCAA CACCATTAGG ACAAAAGACA ACCCTATAGT 301 TTGTACTACC ACCAGGGCAA GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG 361 CATCGGGACA TCTTTTCTTG AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG 421 TGCAACAATA TTGTTGTCCT CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT 481 TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC 541 CTCCACTAGG TTTTG Predicted gene structure (within gDNA segment 12737 to 14627): Exon 1 13407 13420 ( 14 n); cDNA 1 14 ( 14 n); score: 0.857 Intron 1 13421 13486 ( 66 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 1.00) Exon 2 13487 14027 ( 541 n); cDNA 15 555 ( 541 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E214114- 1.000 555 1.000 C PGS_C08HBa0235H18.1+_SGN-E214114- (13407 13420,13487 14027) Alignment (genomic DNA sequence = upper lines): TTTTTTGTTT GTTTATTGGT CTAATTTAGG CTTAATACTT TTCTAAAAGT TATTTTTTTT 13466 |||||| ||| ||| TTTTTTTTTT TTTT...... .......... .......... .......... .......... 14 TTAAAAAAAA AGAACGATAA TTCAAATGCA CTGTTGTTTT ATACATCTAA GACAAAAGTA 13526 |||||||||| |||||||||| |||||||||| |||||||||| .......... .......... TTCAAATGCA CTGTTGTTTT ATACATCTAA GACAAAAGTA 54 CACATGAGAT GTAACTCTTA TTCCGGTCTT TAAGTTTGTT ACGAACTCTT ATCAATAAAG 13586 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACATGAGAT GTAACTCTTA TTCCGGTCTT TAAGTTTGTT ACGAACTCTT ATCAATAAAG 114 TAAAAGTGAA TATTTAAAAA ACTGAGCTAT TAAGATTTTT CATTACGGTA GAGATCAGTT 13646 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAAGTGAA TATTTAAAAA ACTGAGCTAT TAAGATTTTT CATTACGGTA GAGATCAGTT 174 GACTAATTGA GGCGATTTAA AATGAAGAAA CTCAAATTCA CTTGGCCACT TCATCAGTAC 13706 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACTAATTGA GGCGATTTAA AATGAAGAAA CTCAAATTCA CTTGGCCACT TCATCAGTAC 234 TTGCAGGCAT CTCCAAGGGG AAATTTGGAT CAGCAACACC ATTAGGACAA AAGACAACCC 13766 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCAGGCAT CTCCAAGGGG AAATTTGGAT CAGCAACACC ATTAGGACAA AAGACAACCC 294 TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 13826 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 354 TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 13886 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 414 CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 13946 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 474 GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 14006 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 534 ATTTTCCTCC ACTAGGTTTT G 14027 |||||||||| |||||||||| | ATTTTCCTCC ACTAGGTTTT G 555 hqPGS_C08HBa0235H18.1+_SGN-E214114- (13487 14027) ******************************************************************************** EST sequence 1066 -strand 451 n (File: SGN-E349554-) 1 TTTTTTTTTT TTTTTTTTTT TTTTTTTTTT TTCAAATGCA CTGTTGTTTT ATACATCTAA 61 GACAAAAGTA CACATGAGAT GTAACTCTTA TTCCGGTCTT TAAGTTTGTT ACGAACTCTT 121 ATCAATAAAG TAAAAGTGAA TATTTAAAAA ACTGAGCTAT TAAGATTTTT CATTACGGTA 181 GAGATCAGTT GACTAATTGA GGCGATTTAA AATGAAGAAA CTCAAATTCA CTTGGCCACT 241 TCATCAGTAC TTGCAGGCAT CTCCAAGGGG AAATTTGGAT CAGCAACACC ATTAGGACAA 301 AAGACAACCC TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT 361 TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG 421 CCACATGGAC CTTGGGTGCA ACAATATTGT T Predicted gene structure (within gDNA segment 12577 to 14507): Exon 1 13487 13907 ( 421 n); cDNA 31 451 ( 421 n); score: 1.000 PPA cDNA 30 1 MATCH C08HBa0235H18.1+ SGN-E349554- 1.000 421 0.933 C PGS_C08HBa0235H18.1+_SGN-E349554- (13487 13907) Alignment (genomic DNA sequence = upper lines): TTCAAATGCA CTGTTGTTTT ATACATCTAA GACAAAAGTA CACATGAGAT GTAACTCTTA 13546 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCAAATGCA CTGTTGTTTT ATACATCTAA GACAAAAGTA CACATGAGAT GTAACTCTTA 90 TTCCGGTCTT TAAGTTTGTT ACGAACTCTT ATCAATAAAG TAAAAGTGAA TATTTAAAAA 13606 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCGGTCTT TAAGTTTGTT ACGAACTCTT ATCAATAAAG TAAAAGTGAA TATTTAAAAA 150 ACTGAGCTAT TAAGATTTTT CATTACGGTA GAGATCAGTT GACTAATTGA GGCGATTTAA 13666 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTGAGCTAT TAAGATTTTT CATTACGGTA GAGATCAGTT GACTAATTGA GGCGATTTAA 210 AATGAAGAAA CTCAAATTCA CTTGGCCACT TCATCAGTAC TTGCAGGCAT CTCCAAGGGG 13726 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGAAGAAA CTCAAATTCA CTTGGCCACT TCATCAGTAC TTGCAGGCAT CTCCAAGGGG 270 AAATTTGGAT CAGCAACACC ATTAGGACAA AAGACAACCC TATAGTTTGT ACTACCACCA 13786 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATTTGGAT CAGCAACACC ATTAGGACAA AAGACAACCC TATAGTTTGT ACTACCACCA 330 GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 13846 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 390 TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 13906 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 450 T 13907 | T 451 hqPGS_C08HBa0235H18.1+_SGN-E349554- (13487 13907) ******************************************************************************** EST sequence 860 -strand 399 n (File: SGN-E351415-) 1 TTTTTTTTTT TTTTTTTTTT TTTTTTTTTT CAAATGCACT GTTGTTTTAT ACATCTAAGA 61 CAAAAGTACA CATGAGATGT AACTCTTATT CCGGTCTTTA AGTTTGTTAC GAACTCTTAT 121 CAATAAAGTA AAAGTGAATA TTTAAAAAAC TGAGCTATTA AGATTTTTCA TTACGGTAGA 181 GATCAGTTGA CTAATTGAGG CGATTTAAAA TGAAGAAACT CAAATTCACT TGGCCACTTC 241 ATCAGTACTT GCAGGCATCT CCAAGGGGAA ATTTGGATCA GCAACACCAT TAGGACAAAA 301 GACAACCCTA TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG 361 TGGGTAGCTA TAAGCATCGG GACATCTTTT CTTGAAAAA Predicted gene structure (within gDNA segment 12597 to 14457): Exon 1 13487 13857 ( 371 n); cDNA 29 399 ( 371 n); score: 1.000 PPA cDNA 28 1 MATCH C08HBa0235H18.1+ SGN-E351415- 1.000 371 0.930 C PGS_C08HBa0235H18.1+_SGN-E351415- (13487 13857) Alignment (genomic DNA sequence = upper lines): TTCAAATGCA CTGTTGTTTT ATACATCTAA GACAAAAGTA CACATGAGAT GTAACTCTTA 13546 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCAAATGCA CTGTTGTTTT ATACATCTAA GACAAAAGTA CACATGAGAT GTAACTCTTA 88 TTCCGGTCTT TAAGTTTGTT ACGAACTCTT ATCAATAAAG TAAAAGTGAA TATTTAAAAA 13606 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCGGTCTT TAAGTTTGTT ACGAACTCTT ATCAATAAAG TAAAAGTGAA TATTTAAAAA 148 ACTGAGCTAT TAAGATTTTT CATTACGGTA GAGATCAGTT GACTAATTGA GGCGATTTAA 13666 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTGAGCTAT TAAGATTTTT CATTACGGTA GAGATCAGTT GACTAATTGA GGCGATTTAA 208 AATGAAGAAA CTCAAATTCA CTTGGCCACT TCATCAGTAC TTGCAGGCAT CTCCAAGGGG 13726 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGAAGAAA CTCAAATTCA CTTGGCCACT TCATCAGTAC TTGCAGGCAT CTCCAAGGGG 268 AAATTTGGAT CAGCAACACC ATTAGGACAA AAGACAACCC TATAGTTTGT ACTACCACCA 13786 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATTTGGAT CAGCAACACC ATTAGGACAA AAGACAACCC TATAGTTTGT ACTACCACCA 328 GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 13846 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 388 TTCTTGAAAA A 13857 |||||||||| | TTCTTGAAAA A 399 hqPGS_C08HBa0235H18.1+_SGN-E351415- (13487 13857) ******************************************************************************** EST sequence 537 -strand 399 n (File: SGN-E351888-) 1 TTTTTTTTTT TTTTTTTTTT TTNTNTTTTT CAAATGCACT GTTGTTTTAT ACATCTAAGA 61 CAAAAGTACA CATGAGATGT AACTCTTATT CCGGTCTTTA AGTTTGTTAC GAACTCTTAT 121 CAATAAAGTA AAAGTGAATA TTTAAAAAAC TGAGCTATTA AGATTTTTCA TTACGGTAGA 181 GATCAGTTGA CTAATTGAGG CGATTTAAAA TGAAGAAACT CAAATTCACT TGGCCACTTC 241 ATCAGTACTT GCAGGCATCT CCAAGGGGAA ATTTGGATCA GCAACACCAT TAGGACAAAA 301 GACAACCCTA TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG 361 TGGGTAGCTA TAAGCATCGG GACATCTTTT CTTGAAAAA Predicted gene structure (within gDNA segment 12597 to 14457): Exon 1 13487 13857 ( 371 n); cDNA 29 399 ( 371 n); score: 1.000 PPA cDNA 22 1 MATCH C08HBa0235H18.1+ SGN-E351888- 1.000 371 0.930 C PGS_C08HBa0235H18.1+_SGN-E351888- (13487 13857) Alignment (genomic DNA sequence = upper lines): TTCAAATGCA CTGTTGTTTT ATACATCTAA GACAAAAGTA CACATGAGAT GTAACTCTTA 13546 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCAAATGCA CTGTTGTTTT ATACATCTAA GACAAAAGTA CACATGAGAT GTAACTCTTA 88 TTCCGGTCTT TAAGTTTGTT ACGAACTCTT ATCAATAAAG TAAAAGTGAA TATTTAAAAA 13606 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCGGTCTT TAAGTTTGTT ACGAACTCTT ATCAATAAAG TAAAAGTGAA TATTTAAAAA 148 ACTGAGCTAT TAAGATTTTT CATTACGGTA GAGATCAGTT GACTAATTGA GGCGATTTAA 13666 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTGAGCTAT TAAGATTTTT CATTACGGTA GAGATCAGTT GACTAATTGA GGCGATTTAA 208 AATGAAGAAA CTCAAATTCA CTTGGCCACT TCATCAGTAC TTGCAGGCAT CTCCAAGGGG 13726 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGAAGAAA CTCAAATTCA CTTGGCCACT TCATCAGTAC TTGCAGGCAT CTCCAAGGGG 268 AAATTTGGAT CAGCAACACC ATTAGGACAA AAGACAACCC TATAGTTTGT ACTACCACCA 13786 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATTTGGAT CAGCAACACC ATTAGGACAA AAGACAACCC TATAGTTTGT ACTACCACCA 328 GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 13846 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 388 TTCTTGAAAA A 13857 |||||||||| | TTCTTGAAAA A 399 hqPGS_C08HBa0235H18.1+_SGN-E351888- (13487 13857) ******************************************************************************** EST sequence 946 -strand 703 n (File: SGN-E274671-) 1 TTTTTTTTNT CAAATGCACT GTTGTTTTAT ACATCTAAGA CAAAAGTACA CATGAGATGT 61 AACTCTTATT CCGGTCTTTA AGTTTGTTAC GAACTCTTAT CAATAAAGTA AAAGTGAATA 121 TTTAAAAAAC TGAGCTATTA AGATTTTTCA TTACGGTAGA GATCAGTTGA CTAATTGAGG 181 CGATTTAAAA TGAAGAAACT CAAATTCACT TGGCCACTTC ATCAGTACTT GCAGGCATCT 241 CCAAGGGGAA ATTTGGATCA GCAACACCAT TAGGACAAAA GACAACCCTA TAGTTTGTAC 301 TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA TAAGCATCGG 361 GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT TGGGTGCAAC 421 AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACCTTAAGGG 481 CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC 541 TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC 601 AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC 661 CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTG Predicted gene structure (within gDNA segment 12788 to 14781): Exon 1 13488 14181 ( 694 n); cDNA 10 703 ( 694 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E274671- 1.000 694 0.987 C PGS_C08HBa0235H18.1+_SGN-E274671- (13488 14181) Alignment (genomic DNA sequence = upper lines): TCAAATGCAC TGTTGTTTTA TACATCTAAG ACAAAAGTAC ACATGAGATG TAACTCTTAT 13547 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAATGCAC TGTTGTTTTA TACATCTAAG ACAAAAGTAC ACATGAGATG TAACTCTTAT 69 TCCGGTCTTT AAGTTTGTTA CGAACTCTTA TCAATAAAGT AAAAGTGAAT ATTTAAAAAA 13607 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCGGTCTTT AAGTTTGTTA CGAACTCTTA TCAATAAAGT AAAAGTGAAT ATTTAAAAAA 129 CTGAGCTATT AAGATTTTTC ATTACGGTAG AGATCAGTTG ACTAATTGAG GCGATTTAAA 13667 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGAGCTATT AAGATTTTTC ATTACGGTAG AGATCAGTTG ACTAATTGAG GCGATTTAAA 189 ATGAAGAAAC TCAAATTCAC TTGGCCACTT CATCAGTACT TGCAGGCATC TCCAAGGGGA 13727 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGAAGAAAC TCAAATTCAC TTGGCCACTT CATCAGTACT TGCAGGCATC TCCAAGGGGA 249 AATTTGGATC AGCAACACCA TTAGGACAAA AGACAACCCT ATAGTTTGTA CTACCACCAG 13787 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTTGGATC AGCAACACCA TTAGGACAAA AGACAACCCT ATAGTTTGTA CTACCACCAG 309 GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT ATAAGCATCG GGACATCTTT 13847 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT ATAAGCATCG GGACATCTTT 369 TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT 13907 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT 429 GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC 13967 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC 489 ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG 14027 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG 549 TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA 14087 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA 609 AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG 14147 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG 669 TACACTGTAA GACTCCACCA CAATCACCAG TCTG 14181 |||||||||| |||||||||| |||||||||| |||| TACACTGTAA GACTCCACCA CAATCACCAG TCTG 703 hqPGS_C08HBa0235H18.1+_SGN-E274671- (13488 14181) ******************************************************************************** EST sequence 250 +strand 665 n (File: SGN-E390304+) 1 TTTTTTTTTT TTTTTTTTTT TTTTTTTTTT CCAAATGCAC TGTTGTTTTA TACATCTAAA 61 ACAAAAGTAC ACATGAAATG TAACTCTTAT TCCGGTCTTT AAGTTTGTTA CAAACTCTTA 121 TCAATAAAGT AAAAGTGAAT ATTTAAAAAA CTGAGCTATT AAAATTTTTC ATTACGGTAA 181 AAATCAGTTG ACTAATTGAG GCAATTTAAA ATGAAAAAAC TCAAATTCAC TTGGCCACTT 241 CATCAGTACT TGCAGGCATC TCCAAGGGGA AATTTGGATC ACCAACCCCA TTAGGACAAA 301 AAACAACCCT ATATTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT 361 GGGGGTAGCT ATAACCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC 421 CACATGGACC TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAG GGGTTGTTAC 481 ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA 541 TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCTTTGAA ATATTAAATC 601 CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG 661 CTAGG Predicted gene structure (within gDNA segment 12579 to 14732): Exon 1 13489 14122 ( 634 n); cDNA 32 665 ( 634 n); score: 0.973 PPA cDNA 30 1 MATCH C08HBa0235H18.1+ SGN-E390304+ 0.973 634 0.953 C PGS_C08HBa0235H18.1+_SGN-E390304+ (13489 14122) Alignment (genomic DNA sequence = upper lines): CAAATGCACT GTTGTTTTAT ACATCTAAGA CAAAAGTACA CATGAGATGT AACTCTTATT 13548 |||||||||| |||||||||| |||||||| | |||||||||| ||||| |||| |||||||||| CAAATGCACT GTTGTTTTAT ACATCTAAAA CAAAAGTACA CATGAAATGT AACTCTTATT 91 CCGGTCTTTA AGTTTGTTAC GAACTCTTAT CAATAAAGTA AAAGTGAATA TTTAAAAAAC 13608 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| CCGGTCTTTA AGTTTGTTAC AAACTCTTAT CAATAAAGTA AAAGTGAATA TTTAAAAAAC 151 TGAGCTATTA AGATTTTTCA TTACGGTAGA GATCAGTTGA CTAATTGAGG CGATTTAAAA 13668 |||||||||| | |||||||| |||||||| | ||||||||| |||||||||| | |||||||| TGAGCTATTA AAATTTTTCA TTACGGTAAA AATCAGTTGA CTAATTGAGG CAATTTAAAA 211 TGAAGAAACT CAAATTCACT TGGCCACTTC ATCAGTACTT GCAGGCATCT CCAAGGGGAA 13728 |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAAAAACT CAAATTCACT TGGCCACTTC ATCAGTACTT GCAGGCATCT CCAAGGGGAA 271 ATTTGGATCA GCAACACCAT TAGGACAAAA GACAACCCTA TAGTTTGTAC TACCACCAGG 13788 |||||||||| |||| |||| |||||||||| ||||||||| || ||||||| |||||||||| ATTTGGATCA CCAACCCCAT TAGGACAAAA AACAACCCTA TATTTTGTAC TACCACCAGG 331 GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA TAAGCATCGG GACATCTTTT 13848 |||||||||| |||||||||| |||||||||| ||||||||| ||| |||||| |||||||||| GCAAGTAAAT GTGCTTGTAG GATCGTCTTG GGGGTAGCTA TAACCATCGG GACATCTTTT 391 CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT TGGGTGCAAC AATATTGTTG 13908 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT TGGGTGCAAC AATATTGTTG 451 TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACCTTAAGGG CGCGAGGACA 13968 |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| TCCTCCAAAC GTGGTACAGG GGTTGTTACA TCCTCCAGGT ACCTTAAGGG CGCGAGGACA 511 TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT 14028 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT 571 TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA 14088 |||||||||| ||| ||| || |||||||||| |||||||||| |||||||||| |||||||||| TGGGGCAAAA GTCTTTGAAA TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA 631 GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGG 14122 |||||||||| |||||||||| |||||||||| |||| GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGG 665 hqPGS_C08HBa0235H18.1+_SGN-E390304+ (13489 14122) ******************************************************************************** EST sequence 237 +strand 528 n (File: SGN-E298580+) 1 AGAACTAGTC TCGAGTTTTT TTTTTTTTTT TTTTTTTTGC AAACGCACTG TTGTTTTATA 61 CATCTAAGAC AAAAGTACAC ATGAGATGTA ACTCTTATTC CGGTCTTTAA GTTTGTTACG 121 AACTCTTATC AATAAAGTAA AAGTGAATAT TTAAAAAACT GAGCTATTAA GATTTTTCAT 181 TACGGTAGAG ATCAGTTGAC TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT 241 GGCCACTTCA TCAGTACTTG CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT 301 AGGACAAAAG ACAACCCTAT AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG 361 ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC 421 TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG 481 GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATT Predicted gene structure (within gDNA segment 12454 to 14587): Exon 1 13489 13977 ( 489 n); cDNA 40 528 ( 489 n); score: 0.998 PPA cDNA 38 15 MATCH C08HBa0235H18.1+ SGN-E298580+ 0.998 489 0.926 C PGS_C08HBa0235H18.1+_SGN-E298580+ (13489 13977) Alignment (genomic DNA sequence = upper lines): CAAATGCACT GTTGTTTTAT ACATCTAAGA CAAAAGTACA CATGAGATGT AACTCTTATT 13548 |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAACGCACT GTTGTTTTAT ACATCTAAGA CAAAAGTACA CATGAGATGT AACTCTTATT 99 CCGGTCTTTA AGTTTGTTAC GAACTCTTAT CAATAAAGTA AAAGTGAATA TTTAAAAAAC 13608 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGGTCTTTA AGTTTGTTAC GAACTCTTAT CAATAAAGTA AAAGTGAATA TTTAAAAAAC 159 TGAGCTATTA AGATTTTTCA TTACGGTAGA GATCAGTTGA CTAATTGAGG CGATTTAAAA 13668 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAGCTATTA AGATTTTTCA TTACGGTAGA GATCAGTTGA CTAATTGAGG CGATTTAAAA 219 TGAAGAAACT CAAATTCACT TGGCCACTTC ATCAGTACTT GCAGGCATCT CCAAGGGGAA 13728 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAGAAACT CAAATTCACT TGGCCACTTC ATCAGTACTT GCAGGCATCT CCAAGGGGAA 279 ATTTGGATCA GCAACACCAT TAGGACAAAA GACAACCCTA TAGTTTGTAC TACCACCAGG 13788 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTGGATCA GCAACACCAT TAGGACAAAA GACAACCCTA TAGTTTGTAC TACCACCAGG 339 GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA TAAGCATCGG GACATCTTTT 13848 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA TAAGCATCGG GACATCTTTT 399 CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT TGGGTGCAAC AATATTGTTG 13908 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT TGGGTGCAAC AATATTGTTG 459 TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACCTTAAGGG CGCGAGGACA 13968 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACCTTAAGGG CGCGAGGACA 519 TTCACCATT 13977 ||||||||| TTCACCATT 528 hqPGS_C08HBa0235H18.1+_SGN-E298580+ (13489 13977) ******************************************************************************** EST sequence 901 -strand 399 n (File: SGN-E352177-) 1 TTTTNTTTTT TTTTTTTTTN NTTTTTTTTC CAAATGCACT GTTGTTTTAT CCTTTTAGGC 61 CAAAAGTCCC CATGAGATGT AATTCTTATT CCGTTCTTTA AGTTTGTTAC GAATTCTTAT 121 CAATAAAGTA AAAGTGAATA TTTAAAAAAC TGAGCTATTA AGATTTTTCA TTACGGTAGA 181 GATCAGTTGA CTAATTGAGG CGATTTAAAA TGAAGAAACT CAAATTCACT TGGCCACTTC 241 ATCAGTACTT GCAGGCATCT CCAAGGGGAA ATTTGGATCA GCAACACCAT TAGGACAAAA 301 GACAACCCTA TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG 361 TGGGTAGCTA TAAGCATCGG GACATCTTTT CTTGAAAAA Predicted gene structure (within gDNA segment 12003 to 14457): Exon 1 13489 13857 ( 369 n); cDNA 31 399 ( 369 n); score: 0.973 PPA cDNA 19 1 MATCH C08HBa0235H18.1+ SGN-E352177- 0.973 369 0.925 C PGS_C08HBa0235H18.1+_SGN-E352177- (13489 13857) Alignment (genomic DNA sequence = upper lines): CAAATGCACT GTTGTTTTAT ACATCTAAGA CAAAAGTACA CATGAGATGT AACTCTTATT 13548 |||||||||| |||||||||| | | || | ||||||| | |||||||||| || ||||||| CAAATGCACT GTTGTTTTAT CCTTTTAGGC CAAAAGTCCC CATGAGATGT AATTCTTATT 90 CCGGTCTTTA AGTTTGTTAC GAACTCTTAT CAATAAAGTA AAAGTGAATA TTTAAAAAAC 13608 ||| |||||| |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| CCGTTCTTTA AGTTTGTTAC GAATTCTTAT CAATAAAGTA AAAGTGAATA TTTAAAAAAC 150 TGAGCTATTA AGATTTTTCA TTACGGTAGA GATCAGTTGA CTAATTGAGG CGATTTAAAA 13668 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAGCTATTA AGATTTTTCA TTACGGTAGA GATCAGTTGA CTAATTGAGG CGATTTAAAA 210 TGAAGAAACT CAAATTCACT TGGCCACTTC ATCAGTACTT GCAGGCATCT CCAAGGGGAA 13728 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAGAAACT CAAATTCACT TGGCCACTTC ATCAGTACTT GCAGGCATCT CCAAGGGGAA 270 ATTTGGATCA GCAACACCAT TAGGACAAAA GACAACCCTA TAGTTTGTAC TACCACCAGG 13788 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTGGATCA GCAACACCAT TAGGACAAAA GACAACCCTA TAGTTTGTAC TACCACCAGG 330 GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA TAAGCATCGG GACATCTTTT 13848 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA TAAGCATCGG GACATCTTTT 390 CTTGAAAAA 13857 ||||||||| CTTGAAAAA 399 hqPGS_C08HBa0235H18.1+_SGN-E352177- (13489 13857) ******************************************************************************** EST sequence 903 -strand 399 n (File: SGN-E351985-) 1 TTTTTTTTTT TTTTTTTTTT TTTTNNNNNN CAAATGCACT GTTGTTTTAT ACATCTAAGA 61 CAAAAGTACA CATGAGATGT AACTCTTATT CCGGTCTTTA AGTTTGTTAC GAACTCTTAT 121 CAATAAAGTA AAAGTGAATA TTTAAAAAAC TGAGCTATTA AGATTTTTCA TTACGGTAGA 181 GATCAGTTGA CTAATTGAGG CGATTTAAAA TGAAGAAACT CAAATTCACT TGGCCACTTC 241 ATCAGTACTT GCAGGCATCT CCAAGGGGAA ATTTGGATCA GCAACACCAT TAGGACAAAA 301 GACAACCCTA TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG 361 TGGGTAGCTA TAAGCATCGG GACATCTTTT CTTGAAAAA Predicted gene structure (within gDNA segment 12579 to 14457): Exon 1 13489 13857 ( 369 n); cDNA 31 399 ( 369 n); score: 1.000 PPA cDNA 24 1 MATCH C08HBa0235H18.1+ SGN-E351985- 1.000 369 0.925 C PGS_C08HBa0235H18.1+_SGN-E351985- (13489 13857) Alignment (genomic DNA sequence = upper lines): CAAATGCACT GTTGTTTTAT ACATCTAAGA CAAAAGTACA CATGAGATGT AACTCTTATT 13548 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAATGCACT GTTGTTTTAT ACATCTAAGA CAAAAGTACA CATGAGATGT AACTCTTATT 90 CCGGTCTTTA AGTTTGTTAC GAACTCTTAT CAATAAAGTA AAAGTGAATA TTTAAAAAAC 13608 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGGTCTTTA AGTTTGTTAC GAACTCTTAT CAATAAAGTA AAAGTGAATA TTTAAAAAAC 150 TGAGCTATTA AGATTTTTCA TTACGGTAGA GATCAGTTGA CTAATTGAGG CGATTTAAAA 13668 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAGCTATTA AGATTTTTCA TTACGGTAGA GATCAGTTGA CTAATTGAGG CGATTTAAAA 210 TGAAGAAACT CAAATTCACT TGGCCACTTC ATCAGTACTT GCAGGCATCT CCAAGGGGAA 13728 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAGAAACT CAAATTCACT TGGCCACTTC ATCAGTACTT GCAGGCATCT CCAAGGGGAA 270 ATTTGGATCA GCAACACCAT TAGGACAAAA GACAACCCTA TAGTTTGTAC TACCACCAGG 13788 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTGGATCA GCAACACCAT TAGGACAAAA GACAACCCTA TAGTTTGTAC TACCACCAGG 330 GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA TAAGCATCGG GACATCTTTT 13848 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA TAAGCATCGG GACATCTTTT 390 CTTGAAAAA 13857 ||||||||| CTTGAAAAA 399 hqPGS_C08HBa0235H18.1+_SGN-E351985- (13489 13857) ******************************************************************************** EST sequence 559 -strand 722 n (File: SGN-E538599-) 1 AAGACAAAAG TACACATGAG ATGTAACTCT TATTCCGGTT CTTTAAGTTT GTTACGAACT 61 CTTATCAATA AAGTAAAAGT GAATATTTAA AAAACTGAGC TATTAAGATT TTTCATTACG 121 GTAGAGATCA GTTGACTAAT TGAGGCGATT TAAAATGAAG AAACTCAAAT TCACTTGGCC 181 ACTTCATCAG TACTTGCAGG CATCTCCAAG GGGAAATTTG GATCAGCAAC ACCATTAGGA 241 CAAAAGACAA CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT TGTAGGATCG 301 TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA CAACTCTGTA 361 GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT ACAAGGGTTG 421 TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT GGCCGTGCAA 481 TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT TGGAATATTA 541 AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGCGTAC 601 TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC ACCACAATCA 661 CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG ACCCCATATA 721 CG Predicted gene structure (within gDNA segment 12905 to 14835): Exon 1 13515 14235 ( 721 n); cDNA 1 722 ( 722 n); score: 0.997 MATCH C08HBa0235H18.1+ SGN-E538599- 0.997 721 0.999 C PGS_C08HBa0235H18.1+_SGN-E538599- (13515 14235) Alignment (genomic DNA sequence = upper lines): AAGACAAAAG TACACATGAG ATGTAACTCT TATTCCGG-T CTTTAAGTTT GTTACGAACT 13573 |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| AAGACAAAAG TACACATGAG ATGTAACTCT TATTCCGGTT CTTTAAGTTT GTTACGAACT 60 CTTATCAATA AAGTAAAAGT GAATATTTAA AAAACTGAGC TATTAAGATT TTTCATTACG 13633 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTATCAATA AAGTAAAAGT GAATATTTAA AAAACTGAGC TATTAAGATT TTTCATTACG 120 GTAGAGATCA GTTGACTAAT TGAGGCGATT TAAAATGAAG AAACTCAAAT TCACTTGGCC 13693 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTAGAGATCA GTTGACTAAT TGAGGCGATT TAAAATGAAG AAACTCAAAT TCACTTGGCC 180 ACTTCATCAG TACTTGCAGG CATCTCCAAG GGGAAATTTG GATCAGCAAC ACCATTAGGA 13753 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTCATCAG TACTTGCAGG CATCTCCAAG GGGAAATTTG GATCAGCAAC ACCATTAGGA 240 CAAAAGACAA CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT TGTAGGATCG 13813 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAAGACAA CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT TGTAGGATCG 300 TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA CAACTCTGTA 13873 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA CAACTCTGTA 360 GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT ACAAGGGTTG 13933 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT ACAAGGGTTG 420 TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT GGCCGTGCAA 13993 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT GGCCGTGCAA 480 TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT TGGAATATTA 14053 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT TGGAATATTA 540 AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGCGTAC 14113 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGCGTAC 600 TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC ACCACAATCA 14173 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC ACCACAATCA 660 CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG ACCCCATATA 14233 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG ACCCCATATA 720 CG 14235 || CG 722 hqPGS_C08HBa0235H18.1+_SGN-E538599- (13515 14235) ******************************************************************************** EST sequence 79 +strand 606 n (File: SGN-E263405+) 1 TTTTTTTTTT TTTTTTTACA CATGAGATGT AACTCTTATT CCGGTCTTTA AGTTTGTTAC 61 GAACTCTTAT CAATAAAGTA AAAGTGAATA TTTAAAAAAC TGAGCTATTA AGATTTTTCA 121 TTACGGTAGA GATCAGTTGA CTAATTGAGG CGATTTAAAA TGAAGAAACT CAAATTCACT 181 TGGCCACTTC ATCAGTACTT GCAGGCATCT CCAAGGGGAA ATTTGGATCA GCAACACCAT 241 TAGGACAAAA GACAACCCTA TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG 301 GATCGTCTTG TGGGTAGCTA TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT 361 CTGTAGGGCC ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG 421 GGTTGTTACA TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG 481 TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 541 TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 601 CGTACT Predicted gene structure (within gDNA segment 12765 to 14724): Exon 1 13525 14114 ( 590 n); cDNA 17 606 ( 590 n); score: 1.000 PPA cDNA 16 1 MATCH C08HBa0235H18.1+ SGN-E263405+ 1.000 590 0.974 C PGS_C08HBa0235H18.1+_SGN-E263405+ (13525 14114) Alignment (genomic DNA sequence = upper lines): TACACATGAG ATGTAACTCT TATTCCGGTC TTTAAGTTTG TTACGAACTC TTATCAATAA 13584 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACACATGAG ATGTAACTCT TATTCCGGTC TTTAAGTTTG TTACGAACTC TTATCAATAA 76 AGTAAAAGTG AATATTTAAA AAACTGAGCT ATTAAGATTT TTCATTACGG TAGAGATCAG 13644 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTAAAAGTG AATATTTAAA AAACTGAGCT ATTAAGATTT TTCATTACGG TAGAGATCAG 136 TTGACTAATT GAGGCGATTT AAAATGAAGA AACTCAAATT CACTTGGCCA CTTCATCAGT 13704 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGACTAATT GAGGCGATTT AAAATGAAGA AACTCAAATT CACTTGGCCA CTTCATCAGT 196 ACTTGCAGGC ATCTCCAAGG GGAAATTTGG ATCAGCAACA CCATTAGGAC AAAAGACAAC 13764 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTGCAGGC ATCTCCAAGG GGAAATTTGG ATCAGCAACA CCATTAGGAC AAAAGACAAC 256 CCTATAGTTT GTACTACCAC CAGGGCAAGT AAATGTGCTT GTAGGATCGT CTTGTGGGTA 13824 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTATAGTTT GTACTACCAC CAGGGCAAGT AAATGTGCTT GTAGGATCGT CTTGTGGGTA 316 GCTATAAGCA TCGGGACATC TTTTCTTGAA AAATTTGGAC AACTCTGTAG GGCCACATGG 13884 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTATAAGCA TCGGGACATC TTTTCTTGAA AAATTTGGAC AACTCTGTAG GGCCACATGG 376 ACCTTGGGTG CAACAATATT GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC 13944 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTTGGGTG CAACAATATT GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC 436 AGGTACCTTA AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG 14004 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGTACCTTA AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG 496 ACATTTTCCT CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC 14064 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATTTTCCT CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC 556 TAAAGAAATG TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT 14114 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAGAAATG TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT 606 hqPGS_C08HBa0235H18.1+_SGN-E263405+ (13525 14114) ******************************************************************************** EST sequence 93 +strand 613 n (File: SGN-E213028+) 1 ACTAGTCTCG AGTTTTTTTT TTTTTTTTTT TTTTTTTTAC ACATGAGATG TAACTCTTAT 61 TCCGGTCTTT AAGTTTGTTA CGAACTCTTA TCAATAAAGT AAAAGTGAAT ATTTAAAAAA 121 CTGAGCTATT AAGATTTTTC ATTACGGTAG AGATCAGTTG ACTAATTGAG GCGATTTAAA 181 ATGAAGAAAC TCAAATTCAC TTGGCCACTT CATCAGTACT TGCAGGCATC TCCAAGGGGA 241 AATTTGGATC AGCAACACCA TTAGGACAAA AGACAACCCT ATAGTTTGTA CTACCACCAG 301 GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT ATAAGCATCG GGACATCTTT 361 TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT 421 GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC 481 ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG 541 TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA 601 AGTTGCTAAA CTG Predicted gene structure (within gDNA segment 12555 to 14710): Exon 1 13525 14100 ( 576 n); cDNA 38 613 ( 576 n); score: 1.000 PPA cDNA 37 12 MATCH C08HBa0235H18.1+ SGN-E213028+ 1.000 576 0.940 C PGS_C08HBa0235H18.1+_SGN-E213028+ (13525 14100) Alignment (genomic DNA sequence = upper lines): TACACATGAG ATGTAACTCT TATTCCGGTC TTTAAGTTTG TTACGAACTC TTATCAATAA 13584 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACACATGAG ATGTAACTCT TATTCCGGTC TTTAAGTTTG TTACGAACTC TTATCAATAA 97 AGTAAAAGTG AATATTTAAA AAACTGAGCT ATTAAGATTT TTCATTACGG TAGAGATCAG 13644 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTAAAAGTG AATATTTAAA AAACTGAGCT ATTAAGATTT TTCATTACGG TAGAGATCAG 157 TTGACTAATT GAGGCGATTT AAAATGAAGA AACTCAAATT CACTTGGCCA CTTCATCAGT 13704 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGACTAATT GAGGCGATTT AAAATGAAGA AACTCAAATT CACTTGGCCA CTTCATCAGT 217 ACTTGCAGGC ATCTCCAAGG GGAAATTTGG ATCAGCAACA CCATTAGGAC AAAAGACAAC 13764 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTGCAGGC ATCTCCAAGG GGAAATTTGG ATCAGCAACA CCATTAGGAC AAAAGACAAC 277 CCTATAGTTT GTACTACCAC CAGGGCAAGT AAATGTGCTT GTAGGATCGT CTTGTGGGTA 13824 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTATAGTTT GTACTACCAC CAGGGCAAGT AAATGTGCTT GTAGGATCGT CTTGTGGGTA 337 GCTATAAGCA TCGGGACATC TTTTCTTGAA AAATTTGGAC AACTCTGTAG GGCCACATGG 13884 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTATAAGCA TCGGGACATC TTTTCTTGAA AAATTTGGAC AACTCTGTAG GGCCACATGG 397 ACCTTGGGTG CAACAATATT GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC 13944 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTTGGGTG CAACAATATT GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC 457 AGGTACCTTA AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG 14004 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGTACCTTA AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG 517 ACATTTTCCT CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC 14064 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATTTTCCT CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC 577 TAAAGAAATG TCCCAAAAAT CTAAGTTGCT AAACTG 14100 |||||||||| |||||||||| |||||||||| |||||| TAAAGAAATG TCCCAAAAAT CTAAGTTGCT AAACTG 613 hqPGS_C08HBa0235H18.1+_SGN-E213028+ (13525 14100) ******************************************************************************** EST sequence 1098 -strand 499 n (File: SGN-E356548-) 1 TTTTTTTTTT TTACACATGA GATGTAACTC TTATTCCGGT CTTTAAGTTT GTTACGAACT 61 CTTATCAATA AAGTAAAAGT GAATATTTAA AAAACTGAGC TATTAAGATT TTTCATTACG 121 GTAGAGATCA GTTGACTAAT TGAGGCGATT TAAAATGAAG AAACTCAAAT TCACTTGGCC 181 ACTTCATCAG TACTTGCAGG CATCTCCAAG GGGAAATTTG GATCAGCAAC ACCATTAGGA 241 CAAAAGACAA CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT TGTAGGATCG 301 TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA CAACTCTGTA 361 GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT ACAAGGGTTG 421 TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT GGCCGTGCAA 481 TGAATTGCGT GACATTTTC Predicted gene structure (within gDNA segment 12805 to 14612): Exon 1 13525 14012 ( 488 n); cDNA 12 499 ( 488 n); score: 1.000 PPA cDNA 11 1 MATCH C08HBa0235H18.1+ SGN-E356548- 1.000 488 0.978 C PGS_C08HBa0235H18.1+_SGN-E356548- (13525 14012) Alignment (genomic DNA sequence = upper lines): TACACATGAG ATGTAACTCT TATTCCGGTC TTTAAGTTTG TTACGAACTC TTATCAATAA 13584 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACACATGAG ATGTAACTCT TATTCCGGTC TTTAAGTTTG TTACGAACTC TTATCAATAA 71 AGTAAAAGTG AATATTTAAA AAACTGAGCT ATTAAGATTT TTCATTACGG TAGAGATCAG 13644 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTAAAAGTG AATATTTAAA AAACTGAGCT ATTAAGATTT TTCATTACGG TAGAGATCAG 131 TTGACTAATT GAGGCGATTT AAAATGAAGA AACTCAAATT CACTTGGCCA CTTCATCAGT 13704 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGACTAATT GAGGCGATTT AAAATGAAGA AACTCAAATT CACTTGGCCA CTTCATCAGT 191 ACTTGCAGGC ATCTCCAAGG GGAAATTTGG ATCAGCAACA CCATTAGGAC AAAAGACAAC 13764 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTGCAGGC ATCTCCAAGG GGAAATTTGG ATCAGCAACA CCATTAGGAC AAAAGACAAC 251 CCTATAGTTT GTACTACCAC CAGGGCAAGT AAATGTGCTT GTAGGATCGT CTTGTGGGTA 13824 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTATAGTTT GTACTACCAC CAGGGCAAGT AAATGTGCTT GTAGGATCGT CTTGTGGGTA 311 GCTATAAGCA TCGGGACATC TTTTCTTGAA AAATTTGGAC AACTCTGTAG GGCCACATGG 13884 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTATAAGCA TCGGGACATC TTTTCTTGAA AAATTTGGAC AACTCTGTAG GGCCACATGG 371 ACCTTGGGTG CAACAATATT GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC 13944 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTTGGGTG CAACAATATT GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC 431 AGGTACCTTA AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG 14004 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGTACCTTA AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG 491 ACATTTTC 14012 |||||||| ACATTTTC 499 hqPGS_C08HBa0235H18.1+_SGN-E356548- (13525 14012) ******************************************************************************** EST sequence 323 +strand 486 n (File: SGN-E276361+) 1 GAGAACTAGT CTCGAGTTTT TTTTTTTTTT TTTTACACAT GAGATGTAAC TCTTATTCCG 61 GTCTTTAAGT TTGTTACGAA CTCTTATCAA TAAAGTAAAA GTGAATATTT AAAAAACTGA 121 GCTATTAAGA TTTTTCATTA CGGTAGAGAT CAGTTGACTA ATTGAGGCGA TTTAAAATGA 181 AGAAACTCAA ATTCACTTGG CCACTTCATC AGTACTTGCA GGCATCTCCA AGGGGAAATT 241 TGGATCAGCA ACACCATTAG GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA 301 AGTAAATGTG CTTGTAGGAT CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT 361 GAAAAATTTG GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC 421 TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC 481 ACCATT Predicted gene structure (within gDNA segment 12595 to 14587): Exon 1 13525 13977 ( 453 n); cDNA 34 486 ( 453 n); score: 1.000 PPA cDNA 33 16 MATCH C08HBa0235H18.1+ SGN-E276361+ 1.000 453 0.932 C PGS_C08HBa0235H18.1+_SGN-E276361+ (13525 13977) Alignment (genomic DNA sequence = upper lines): TACACATGAG ATGTAACTCT TATTCCGGTC TTTAAGTTTG TTACGAACTC TTATCAATAA 13584 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACACATGAG ATGTAACTCT TATTCCGGTC TTTAAGTTTG TTACGAACTC TTATCAATAA 93 AGTAAAAGTG AATATTTAAA AAACTGAGCT ATTAAGATTT TTCATTACGG TAGAGATCAG 13644 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTAAAAGTG AATATTTAAA AAACTGAGCT ATTAAGATTT TTCATTACGG TAGAGATCAG 153 TTGACTAATT GAGGCGATTT AAAATGAAGA AACTCAAATT CACTTGGCCA CTTCATCAGT 13704 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGACTAATT GAGGCGATTT AAAATGAAGA AACTCAAATT CACTTGGCCA CTTCATCAGT 213 ACTTGCAGGC ATCTCCAAGG GGAAATTTGG ATCAGCAACA CCATTAGGAC AAAAGACAAC 13764 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTGCAGGC ATCTCCAAGG GGAAATTTGG ATCAGCAACA CCATTAGGAC AAAAGACAAC 273 CCTATAGTTT GTACTACCAC CAGGGCAAGT AAATGTGCTT GTAGGATCGT CTTGTGGGTA 13824 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTATAGTTT GTACTACCAC CAGGGCAAGT AAATGTGCTT GTAGGATCGT CTTGTGGGTA 333 GCTATAAGCA TCGGGACATC TTTTCTTGAA AAATTTGGAC AACTCTGTAG GGCCACATGG 13884 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTATAAGCA TCGGGACATC TTTTCTTGAA AAATTTGGAC AACTCTGTAG GGCCACATGG 393 ACCTTGGGTG CAACAATATT GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC 13944 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTTGGGTG CAACAATATT GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC 453 AGGTACCTTA AGGGCGCGAG GACATTCACC ATT 13977 |||||||||| |||||||||| |||||||||| ||| AGGTACCTTA AGGGCGCGAG GACATTCACC ATT 486 hqPGS_C08HBa0235H18.1+_SGN-E276361+ (13525 13977) ******************************************************************************** EST sequence 816 -strand 615 n (File: SGN-E353799-) 1 TTTTTTTTTT TCACATGAGA TGTAACTCTT ATTCCGGTCT TTAAGTTTGT TACGAACTCT 61 TATCAATAAA GTAAAAGTGA ATATTTAAAA AACTGAGCTA TTAAGATTTT TCATTACGGT 121 AGAGATCAGT TGACTAATTG AGGCGATTTA AAATGAAGAA ACTCAAATTC ACTTGGCCAC 181 TTCATCAGTA CTTGCAGGCA TCTCCAAGGG GAAATTTGGA TCAGCAACAC CATTAGGACA 241 AAAGACAACC CTATAGTTTG TACTACCACC AGGGCAAGTA AATGTGCTTG TAGGATCGTC 301 TTGTGGGTAG CTATAAGCAT CGGGACATCT TTTCTTGAAA AATTTGGACA ACTCTGTAGG 361 GCCACATGGA CCTTGGGTGC AACAATATTG TTGTCCTCCA AACGTGGTAC AAGGGTTGTT 421 ACATCCTCCA GGTACCTTAA GGGCGCGAGG ACATTCACCA TTTATATTGG CCGTGCAATG 481 AATTGCGTGA CATTTTCCTC CACTAGGTTT TGTTGGGGCA AAAGTCATTG GAATATTAAA 541 TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA AACTGGTCCA AGGCGTACTC 601 GGCTAGGGTG TTTGG Predicted gene structure (within gDNA segment 12807 to 14730): Exon 1 13527 14130 ( 604 n); cDNA 12 615 ( 604 n); score: 1.000 PPA cDNA 11 1 MATCH C08HBa0235H18.1+ SGN-E353799- 1.000 604 0.982 C PGS_C08HBa0235H18.1+_SGN-E353799- (13527 14130) Alignment (genomic DNA sequence = upper lines): CACATGAGAT GTAACTCTTA TTCCGGTCTT TAAGTTTGTT ACGAACTCTT ATCAATAAAG 13586 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACATGAGAT GTAACTCTTA TTCCGGTCTT TAAGTTTGTT ACGAACTCTT ATCAATAAAG 71 TAAAAGTGAA TATTTAAAAA ACTGAGCTAT TAAGATTTTT CATTACGGTA GAGATCAGTT 13646 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAAGTGAA TATTTAAAAA ACTGAGCTAT TAAGATTTTT CATTACGGTA GAGATCAGTT 131 GACTAATTGA GGCGATTTAA AATGAAGAAA CTCAAATTCA CTTGGCCACT TCATCAGTAC 13706 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACTAATTGA GGCGATTTAA AATGAAGAAA CTCAAATTCA CTTGGCCACT TCATCAGTAC 191 TTGCAGGCAT CTCCAAGGGG AAATTTGGAT CAGCAACACC ATTAGGACAA AAGACAACCC 13766 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCAGGCAT CTCCAAGGGG AAATTTGGAT CAGCAACACC ATTAGGACAA AAGACAACCC 251 TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 13826 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 311 TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 13886 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 371 CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 13946 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 431 GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 14006 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 491 ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 14066 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 551 AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT 14126 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT 611 TTGG 14130 |||| TTGG 615 hqPGS_C08HBa0235H18.1+_SGN-E353799- (13527 14130) ******************************************************************************** EST sequence 965 -strand 652 n (File: SGN-E276802-) 1 ATGAGATGTA ACTCTTATTC CGGTCTTTAA GTTTGTTACG AACTCTTATC AATAAAGTAA 61 AAGTGAATAT TTAAAAAACT GAGCTATTAA GATTTTTCAT TACGGTAGAG ATCAGTTGAC 121 TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT GGCCACTTCA TCAGTACTTG 181 CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG ACAACCCTAT 241 AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT 301 AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 361 GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 421 CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 481 TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 541 AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 601 GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TG Predicted gene structure (within gDNA segment 12920 to 14781): Exon 1 13530 14181 ( 652 n); cDNA 1 652 ( 652 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E276802- 1.000 652 1.000 C PGS_C08HBa0235H18.1+_SGN-E276802- (13530 14181) Alignment (genomic DNA sequence = upper lines): ATGAGATGTA ACTCTTATTC CGGTCTTTAA GTTTGTTACG AACTCTTATC AATAAAGTAA 13589 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGAGATGTA ACTCTTATTC CGGTCTTTAA GTTTGTTACG AACTCTTATC AATAAAGTAA 60 AAGTGAATAT TTAAAAAACT GAGCTATTAA GATTTTTCAT TACGGTAGAG ATCAGTTGAC 13649 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTGAATAT TTAAAAAACT GAGCTATTAA GATTTTTCAT TACGGTAGAG ATCAGTTGAC 120 TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT GGCCACTTCA TCAGTACTTG 13709 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT GGCCACTTCA TCAGTACTTG 180 CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG ACAACCCTAT 13769 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG ACAACCCTAT 240 AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT 13829 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT 300 AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 13889 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 360 GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 13949 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 420 CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 14009 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 480 TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 14069 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 540 AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 14129 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 600 GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TG 14181 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TG 652 hqPGS_C08HBa0235H18.1+_SGN-E276802- (13530 14181) ******************************************************************************** EST sequence 126 +strand 431 n (File: SGN-E261117+) 1 TTTTTTTTTT TTTTTTTACC ATGAGATGTA ACTCTTATTC CGGTCTTTAA GTTTGTTACG 61 AACTCTTATC AATAAAGTAA AAGTGAATAT TTAAAAAACT GAGCTATTAA GATTTTTCAT 121 TACGGTAGAG ATCAGTTGAC TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT 181 GGCCACTTCA TCAGAACTTG CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT 241 AGGACAAAAG ACAACCCTAT AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG 301 ATCGGCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC 361 TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG 421 GTTGGTACAT C Predicted gene structure (within gDNA segment 12739 to 14613): Exon 1 13530 13940 ( 411 n); cDNA 21 431 ( 411 n); score: 0.993 PPA cDNA 17 1 MATCH C08HBa0235H18.1+ SGN-E261117+ 0.993 411 0.954 C PGS_C08HBa0235H18.1+_SGN-E261117+ (13530 13940) Alignment (genomic DNA sequence = upper lines): ATGAGATGTA ACTCTTATTC CGGTCTTTAA GTTTGTTACG AACTCTTATC AATAAAGTAA 13589 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGAGATGTA ACTCTTATTC CGGTCTTTAA GTTTGTTACG AACTCTTATC AATAAAGTAA 80 AAGTGAATAT TTAAAAAACT GAGCTATTAA GATTTTTCAT TACGGTAGAG ATCAGTTGAC 13649 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTGAATAT TTAAAAAACT GAGCTATTAA GATTTTTCAT TACGGTAGAG ATCAGTTGAC 140 TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT GGCCACTTCA TCAGTACTTG 13709 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT GGCCACTTCA TCAGAACTTG 200 CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG ACAACCCTAT 13769 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG ACAACCCTAT 260 AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT 13829 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGGCTTGT GGGTAGCTAT 320 AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 13889 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 380 GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT C 13940 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| | GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGGTACAT C 431 hqPGS_C08HBa0235H18.1+_SGN-E261117+ (13530 13940) ******************************************************************************** EST sequence 496 -strand 730 n (File: SGN-E210719-) 1 TTTTTTGAGA TGTAACTCTT ATTCCGGTCT TTAAGTTTGC TACGAACTCT TATCAATAAA 61 GTAAAAGTGA ATATTTAAAA AACTGAGCTA TTAAGATCTT TCATTACGGT AGAGATCAGT 121 TGACTAATTG AGGCGATTTA AAATGAAGAA ACTCAAATTC ACTTGGCCAC TTCATCAGTA 181 CTTGCAGGCA TCTCCAAGGG GAAATTTGGA TCAGCAACAC CATTAGGACA AAAGACAACC 241 CTATAGTTTG TACTACCACC AGGGCAAGTA AATGTGCTTG TAGGATCGTC TTGTGGGTAG 301 CTATAAGCAT CGGGACATCT TTTCTTGAAA AATTTGGACA ACTCTGTAGG GCCACATGGA 361 CCTTGGGTGC AACAATATTG TTGTCCTCCA AACGTGGTAC AAGGGTTGTT ACATCCTCCA 421 GGTACCTTAA GGGCGCGAGG ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA 481 CATTTTCCTC CACTAGGTTT TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT 541 AAAGAAATGT CCCAAAAATC TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG 601 TTTGGGGGTT TGCCCCATCC GGTACACTGT AAGACTCCAC CACAATCACC AGTATGACAT 661 GTACCTCTGC CTGCAGCATT AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA 721 GTTCCCCTCG Predicted gene structure (within gDNA segment 12871 to 14855): Exon 1 13531 14255 ( 725 n); cDNA 6 730 ( 725 n); score: 0.996 MATCH C08HBa0235H18.1+ SGN-E210719- 0.996 725 0.993 C PGS_C08HBa0235H18.1+_SGN-E210719- (13531 14255) Alignment (genomic DNA sequence = upper lines): TGAGATGTAA CTCTTATTCC GGTCTTTAAG TTTGTTACGA ACTCTTATCA ATAAAGTAAA 13590 |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| TGAGATGTAA CTCTTATTCC GGTCTTTAAG TTTGCTACGA ACTCTTATCA ATAAAGTAAA 65 AGTGAATATT TAAAAAACTG AGCTATTAAG ATTTTTCATT ACGGTAGAGA TCAGTTGACT 13650 |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| AGTGAATATT TAAAAAACTG AGCTATTAAG ATCTTTCATT ACGGTAGAGA TCAGTTGACT 125 AATTGAGGCG ATTTAAAATG AAGAAACTCA AATTCACTTG GCCACTTCAT CAGTACTTGC 13710 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTGAGGCG ATTTAAAATG AAGAAACTCA AATTCACTTG GCCACTTCAT CAGTACTTGC 185 AGGCATCTCC AAGGGGAAAT TTGGATCAGC AACACCATTA GGACAAAAGA CAACCCTATA 13770 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGCATCTCC AAGGGGAAAT TTGGATCAGC AACACCATTA GGACAAAAGA CAACCCTATA 245 GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA TCGTCTTGTG GGTAGCTATA 13830 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA TCGTCTTGTG GGTAGCTATA 305 AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT GTAGGGCCAC ATGGACCTTG 13890 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT GTAGGGCCAC ATGGACCTTG 365 GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 13950 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 425 CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 14010 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 485 TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 14070 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 545 AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 14130 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 605 GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 14190 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTAT GACATGTACC 665 TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 14250 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 725 CCTCG 14255 ||||| CCTCG 730 hqPGS_C08HBa0235H18.1+_SGN-E210719- (13531 14255) ******************************************************************************** EST sequence 1143 -strand 620 n (File: SGN-E357453-) 1 TTTTTTTTTT TTTGAGATGT AACTCTTATT CCGGTCTTTA AGTTTGTTAC GAACTCTTAT 61 CAATAAAGTA AAAGTGAATA TTTAAAAAAC TGAGCTATTA AGATTTTTCA TTACGGTAGA 121 GATCAGTTGA CTAATTGAGG CGATTTAAAA TGAAGAAACT CAAATTCACT TGGCCACTTC 181 ATCAGTACTT GCAGGCATCT CCAAGGGGAA ATTTGGATCA GCAACACCAT TAGGACAAAA 241 GACAACCCTA TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG 301 TGGGTAGCTA TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC 361 ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 421 TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 481 TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 541 ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 601 TAGGGTGTTT GGGGGTTTGC Predicted gene structure (within gDNA segment 12801 to 14738): Exon 1 13531 14138 ( 608 n); cDNA 13 620 ( 608 n); score: 1.000 PPA cDNA 12 1 MATCH C08HBa0235H18.1+ SGN-E357453- 1.000 608 0.981 C PGS_C08HBa0235H18.1+_SGN-E357453- (13531 14138) Alignment (genomic DNA sequence = upper lines): TGAGATGTAA CTCTTATTCC GGTCTTTAAG TTTGTTACGA ACTCTTATCA ATAAAGTAAA 13590 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAGATGTAA CTCTTATTCC GGTCTTTAAG TTTGTTACGA ACTCTTATCA ATAAAGTAAA 72 AGTGAATATT TAAAAAACTG AGCTATTAAG ATTTTTCATT ACGGTAGAGA TCAGTTGACT 13650 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTGAATATT TAAAAAACTG AGCTATTAAG ATTTTTCATT ACGGTAGAGA TCAGTTGACT 132 AATTGAGGCG ATTTAAAATG AAGAAACTCA AATTCACTTG GCCACTTCAT CAGTACTTGC 13710 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTGAGGCG ATTTAAAATG AAGAAACTCA AATTCACTTG GCCACTTCAT CAGTACTTGC 192 AGGCATCTCC AAGGGGAAAT TTGGATCAGC AACACCATTA GGACAAAAGA CAACCCTATA 13770 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGCATCTCC AAGGGGAAAT TTGGATCAGC AACACCATTA GGACAAAAGA CAACCCTATA 252 GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA TCGTCTTGTG GGTAGCTATA 13830 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA TCGTCTTGTG GGTAGCTATA 312 AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT GTAGGGCCAC ATGGACCTTG 13890 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT GTAGGGCCAC ATGGACCTTG 372 GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 13950 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 432 CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 14010 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 492 TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 14070 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 552 AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 14130 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 612 GGGTTTGC 14138 |||||||| GGGTTTGC 620 hqPGS_C08HBa0235H18.1+_SGN-E357453- (13531 14138) ******************************************************************************** EST sequence 1141 -strand 614 n (File: SGN-E357325-) 1 TTTTTTTTTG AGATGTAACT CTTATTCCGG TCTTTAAGTT TGTTACGCAC TCTTATCAAT 61 AAAGTAAAAG TGAATATTTA AAAAACTGAG CTATTAAGAT TTTTCATTAC GGTAGAGATC 121 AGTTGACTAA TTGAGGCGAT TTAAAATGAA GAAACTCAAA TTCACTTGGC CACTTCATCA 181 GTACTTGCAG GCATCTCCAA GGGGAAATTT GGATCAGCAA CACCATTAGG ACAAAAGACA 241 ACCCTATAGT TTGTCCTACC ACCAGGGCAA GTAAATGTGC TTGTAGGATC GTCTTGTGGG 301 TAGCTATAAG CATCGGGACA TCTTTTCTTG AAAAATATGG ACATCTCTGT AGGGCCACAT 361 GGTCCTTGGG TGCAACAATA TTGTTGTCCT CCAAACGTGG TACAAGGGTT GTTACATCCT 421 CCAGGTACCA TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA ATGAATTGCG 481 TGACATTTTC CTCCACTAGG TTTTGTTGGG GCAAAAGTCA TTGGAATATT AAATCCATCG 541 AGTAAAGAAA TGTCCCAAAA ATATAAGTTG CTAAAGTGGT CCAAGGCGTA CTCGGCTAGG 601 GTGTCTGGGG GTTT Predicted gene structure (within gDNA segment 8899 to 15177): Exon 1 13531 14136 ( 606 n); cDNA 9 614 ( 606 n); score: 0.983 MATCH C08HBa0235H18.1+ SGN-E357325- 0.983 606 0.987 C PGS_C08HBa0235H18.1+_SGN-E357325- (13531 14136) Alignment (genomic DNA sequence = upper lines): TGAGATGTAA CTCTTATTCC GGTCTTTAAG TTTGTTACGA ACTCTTATCA ATAAAGTAAA 13590 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| TGAGATGTAA CTCTTATTCC GGTCTTTAAG TTTGTTACGC ACTCTTATCA ATAAAGTAAA 68 AGTGAATATT TAAAAAACTG AGCTATTAAG ATTTTTCATT ACGGTAGAGA TCAGTTGACT 13650 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTGAATATT TAAAAAACTG AGCTATTAAG ATTTTTCATT ACGGTAGAGA TCAGTTGACT 128 AATTGAGGCG ATTTAAAATG AAGAAACTCA AATTCACTTG GCCACTTCAT CAGTACTTGC 13710 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTGAGGCG ATTTAAAATG AAGAAACTCA AATTCACTTG GCCACTTCAT CAGTACTTGC 188 AGGCATCTCC AAGGGGAAAT TTGGATCAGC AACACCATTA GGACAAAAGA CAACCCTATA 13770 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGCATCTCC AAGGGGAAAT TTGGATCAGC AACACCATTA GGACAAAAGA CAACCCTATA 248 GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA TCGTCTTGTG GGTAGCTATA 13830 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTGTCCTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA TCGTCTTGTG GGTAGCTATA 308 AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT GTAGGGCCAC ATGGACCTTG 13890 |||||||||| |||||||||| |||||||| | ||||| |||| |||||||||| |||| ||||| AGCATCGGGA CATCTTTTCT TGAAAAATAT GGACATCTCT GTAGGGCCAC ATGGTCCTTG 368 GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 13950 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 428 CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 14010 | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 488 TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 14070 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGAGTAAAGA 548 AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 14130 |||||||||| |||| ||||| ||||||| || |||||||||| |||||||||| |||||| ||| AATGTCCCAA AAATATAAGT TGCTAAAGTG GTCCAAGGCG TACTCGGCTA GGGTGTCTGG 608 GGGTTT 14136 |||||| GGGTTT 614 hqPGS_C08HBa0235H18.1+_SGN-E357325- (13531 14136) ******************************************************************************** EST sequence 963 -strand 201 n (File: SGN-E353478-) 1 TTTTTTTTTT TCCGGTCTTT AAGTTTGTTA CGAACTCTTA TCAATAAAGT AAAAGTGAAT 61 ATTTAAAAAA CTGAGCTATT AAGATTTTTC ATTACGGTAG AGATCAGTTG ACTAATTGAG 121 GCGATTTAAA ATGAAGAAAC TCAAATTCAC TTGGCCACTT CATCAGTACT TGCAGGCATC 181 TCCAAGGGGA AATTTGGATC A Predicted gene structure (within gDNA segment 12847 to 14338): Exon 1 13544 13738 ( 195 n); cDNA 7 201 ( 195 n); score: 0.995 MATCH C08HBa0235H18.1+ SGN-E353478- 0.995 195 0.970 C PGS_C08HBa0235H18.1+_SGN-E353478- (13544 13738) Alignment (genomic DNA sequence = upper lines): TTATTCCGGT CTTTAAGTTT GTTACGAACT CTTATCAATA AAGTAAAAGT GAATATTTAA 13603 || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTTCCGGT CTTTAAGTTT GTTACGAACT CTTATCAATA AAGTAAAAGT GAATATTTAA 66 AAAACTGAGC TATTAAGATT TTTCATTACG GTAGAGATCA GTTGACTAAT TGAGGCGATT 13663 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAACTGAGC TATTAAGATT TTTCATTACG GTAGAGATCA GTTGACTAAT TGAGGCGATT 126 TAAAATGAAG AAACTCAAAT TCACTTGGCC ACTTCATCAG TACTTGCAGG CATCTCCAAG 13723 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAATGAAG AAACTCAAAT TCACTTGGCC ACTTCATCAG TACTTGCAGG CATCTCCAAG 186 GGGAAATTTG GATCA 13738 |||||||||| ||||| GGGAAATTTG GATCA 201 hqPGS_C08HBa0235H18.1+_SGN-E353478- (13544 13738) ******************************************************************************** EST sequence 502 -strand 712 n (File: SGN-E210726-) 1 TATTCCGGTT CTTTAAGTTT GTTACGAACT CTTATCAATA AAGTAAAAGT GAATATTTAA 61 AAAACTGAGC TATTAAGATT TTTCATTACG GTAGAGATCA GTTGACTAAT TGAGGCGATT 121 TAAAATGAAG AAACTCAAAT TCACTTGGCC ACTTCATCAG TACTTGCAGG CATCTCCAAG 181 GGGAAATTTG GATCAGCAAC ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA 241 CCAGGGCAAG TAAATGTGCT TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT 301 CTTTTCTTGA AAAATTTGGA CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT 361 TGTTGTCCTC CAAACGTGGT ACAAGGGTTG TTACATCCTC CAGGTACCTT AAGGGCGCGA 421 GGACATTCAC CATTTATATT GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT 481 TTTGTTGGGG CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA 541 TCTAAGTTGC TAAACTGGTC CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT 601 CCGGTACACT GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA 661 TTAAAGTTGC AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT CG Predicted gene structure (within gDNA segment 12853 to 14855): Exon 1 13545 14255 ( 711 n); cDNA 1 712 ( 712 n); score: 0.996 MATCH C08HBa0235H18.1+ SGN-E210726- 0.996 711 0.999 C PGS_C08HBa0235H18.1+_SGN-E210726- (13545 14255) Alignment (genomic DNA sequence = upper lines): TATTCCGG-T CTTTAAGTTT GTTACGAACT CTTATCAATA AAGTAAAAGT GAATATTTAA 13603 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATTCCGGTT CTTTAAGTTT GTTACGAACT CTTATCAATA AAGTAAAAGT GAATATTTAA 60 AAAACTGAGC TATTAAGATT TTTCATTACG GTAGAGATCA GTTGACTAAT TGAGGCGATT 13663 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAACTGAGC TATTAAGATT TTTCATTACG GTAGAGATCA GTTGACTAAT TGAGGCGATT 120 TAAAATGAAG AAACTCAAAT TCACTTGGCC ACTTCATCAG TACTTGCAGG CATCTCCAAG 13723 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAATGAAG AAACTCAAAT TCACTTGGCC ACTTCATCAG TACTTGCAGG CATCTCCAAG 180 GGGAAATTTG GATCAGCAAC ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA 13783 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGAAATTTG GATCAGCAAC ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA 240 CCAGGGCAAG TAAATGTGCT TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT 13843 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAGGGCAAG TAAATGTGCT TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT 300 CTTTTCTTGA AAAATTTGGA CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT 13903 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTTCTTGA AAAATTTGGA CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT 360 TGTTGTCCTC CAAACGTGGT ACAAGGGTTG TTACATCCTC CAGGTACCTT AAGGGCGCGA 13963 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTGTCCTC CAAACGTGGT ACAAGGGTTG TTACATCCTC CAGGTACCTT AAGGGCGCGA 420 GGACATTCAC CATTTATATT GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT 14023 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGACATTCAC CATTTATATT GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT 480 TTTGTTGGGG CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA 14083 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGTTGGGG CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA 540 TCTAAGTTGC TAAACTGGTC CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT 14143 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTAAGTTGC TAAACTGGTC CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT 600 CCGGTACACT GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA 14203 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGGTACACT GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA 660 TTAAAGTTGC AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT CG 14255 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || TTAAAGTTGC AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT CG 712 hqPGS_C08HBa0235H18.1+_SGN-E210726- (13545 14255) ******************************************************************************** EST sequence 517 -strand 713 n (File: SGN-E210944-) 1 TATCAATAAA GTAAAAGTGA ATATTTAAAA AACTGAGCTA TTAAGATTTT TCATTACGGT 61 AGAGATCAGT TGACTAATTG AGGCGATTTA AAATGAAGAA ACTCAAATTC ACTTGGCCAC 121 TTCATCAGTA CTTGCAGGCA TCTCCAAGGG GAAATTTGGA TCAGCAACAC CATTAGGACA 181 AAAGACAACC CTATAGTTTG TACTACCACC AGGGCAAGTA AATGTGCTTG TAGGATCGTC 241 TTGTGGGTAG CTATAAGCAT CGGGACATCT TTTCTTGAAA AATTTGGACA ACTCTGTAGG 301 GCCACATGGA CCTTGGGTGC AACAATATTG TTGTCCTCCA AACGTGGTAC AAGGGTTGTT 361 ACATCCTCCA GGTACCTTAA GGGCGCGAGG ACATTCACCA TTTATATTGG CCGTGCAATG 421 AATTGCGTGA CATTTTCCTC CACTAGGTTT TGTTGGGGCA AAAGTCATTG GAATATTAAA 481 TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA AACTGGTCCA AGGCGTACTC 541 GGCTAGGGTG TTTGGGGGTT TGCCCCATCC GGTACACTGT AAGACTCCAC CACAATCACC 601 AGTCTGACAT GTACCTCTGC CTGCAGCATT AAAGTTGCAA CCAGTACGAC CCCATATACG 661 TGCCATCTTA GTTCCCCTCG GAGCATTGAT GACCCATGTT TGGCCTCGAT TGA Predicted gene structure (within gDNA segment 12966 to 14888): Exon 1 13576 14288 ( 713 n); cDNA 1 713 ( 713 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E210944- 1.000 713 1.000 C PGS_C08HBa0235H18.1+_SGN-E210944- (13576 14288) Alignment (genomic DNA sequence = upper lines): TATCAATAAA GTAAAAGTGA ATATTTAAAA AACTGAGCTA TTAAGATTTT TCATTACGGT 13635 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATCAATAAA GTAAAAGTGA ATATTTAAAA AACTGAGCTA TTAAGATTTT TCATTACGGT 60 AGAGATCAGT TGACTAATTG AGGCGATTTA AAATGAAGAA ACTCAAATTC ACTTGGCCAC 13695 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAGATCAGT TGACTAATTG AGGCGATTTA AAATGAAGAA ACTCAAATTC ACTTGGCCAC 120 TTCATCAGTA CTTGCAGGCA TCTCCAAGGG GAAATTTGGA TCAGCAACAC CATTAGGACA 13755 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCATCAGTA CTTGCAGGCA TCTCCAAGGG GAAATTTGGA TCAGCAACAC CATTAGGACA 180 AAAGACAACC CTATAGTTTG TACTACCACC AGGGCAAGTA AATGTGCTTG TAGGATCGTC 13815 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGACAACC CTATAGTTTG TACTACCACC AGGGCAAGTA AATGTGCTTG TAGGATCGTC 240 TTGTGGGTAG CTATAAGCAT CGGGACATCT TTTCTTGAAA AATTTGGACA ACTCTGTAGG 13875 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTGGGTAG CTATAAGCAT CGGGACATCT TTTCTTGAAA AATTTGGACA ACTCTGTAGG 300 GCCACATGGA CCTTGGGTGC AACAATATTG TTGTCCTCCA AACGTGGTAC AAGGGTTGTT 13935 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCACATGGA CCTTGGGTGC AACAATATTG TTGTCCTCCA AACGTGGTAC AAGGGTTGTT 360 ACATCCTCCA GGTACCTTAA GGGCGCGAGG ACATTCACCA TTTATATTGG CCGTGCAATG 13995 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATCCTCCA GGTACCTTAA GGGCGCGAGG ACATTCACCA TTTATATTGG CCGTGCAATG 420 AATTGCGTGA CATTTTCCTC CACTAGGTTT TGTTGGGGCA AAAGTCATTG GAATATTAAA 14055 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTGCGTGA CATTTTCCTC CACTAGGTTT TGTTGGGGCA AAAGTCATTG GAATATTAAA 480 TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA AACTGGTCCA AGGCGTACTC 14115 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA AACTGGTCCA AGGCGTACTC 540 GGCTAGGGTG TTTGGGGGTT TGCCCCATCC GGTACACTGT AAGACTCCAC CACAATCACC 14175 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCTAGGGTG TTTGGGGGTT TGCCCCATCC GGTACACTGT AAGACTCCAC CACAATCACC 600 AGTCTGACAT GTACCTCTGC CTGCAGCATT AAAGTTGCAA CCAGTACGAC CCCATATACG 14235 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTCTGACAT GTACCTCTGC CTGCAGCATT AAAGTTGCAA CCAGTACGAC CCCATATACG 660 TGCCATCTTA GTTCCCCTCG GAGCATTGAT GACCCATGTT TGGCCTCGAT TGA 14288 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| TGCCATCTTA GTTCCCCTCG GAGCATTGAT GACCCATGTT TGGCCTCGAT TGA 713 hqPGS_C08HBa0235H18.1+_SGN-E210944- (13576 14288) ******************************************************************************** EST sequence 894 -strand 672 n (File: SGN-E268624-) 1 ATCAATAAAG TAAAAGTGAA TATTTAAAAA ACTGAGCTAT TAAGATTTTT CATTACGGTA 61 GAGATCAGTT GACTAATTGA GGCGATTTAA AATGAAGAAA CTCAAATTCA CTTGGCCACT 121 TCATCAGTAC TTGCAGGCAT CTCCAAGGGG AAATTTGGAT CAGCAACACC ATTAGGACAA 181 AAGACAACCC TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT 241 TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG 301 CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA 361 CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA 421 ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT 481 CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG 541 GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA 601 GTCTGACATG TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT 661 GCCATCTTAG TT Predicted gene structure (within gDNA segment 12967 to 14848): Exon 1 13577 14248 ( 672 n); cDNA 1 672 ( 672 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E268624- 1.000 672 1.000 C PGS_C08HBa0235H18.1+_SGN-E268624- (13577 14248) Alignment (genomic DNA sequence = upper lines): ATCAATAAAG TAAAAGTGAA TATTTAAAAA ACTGAGCTAT TAAGATTTTT CATTACGGTA 13636 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCAATAAAG TAAAAGTGAA TATTTAAAAA ACTGAGCTAT TAAGATTTTT CATTACGGTA 60 GAGATCAGTT GACTAATTGA GGCGATTTAA AATGAAGAAA CTCAAATTCA CTTGGCCACT 13696 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGATCAGTT GACTAATTGA GGCGATTTAA AATGAAGAAA CTCAAATTCA CTTGGCCACT 120 TCATCAGTAC TTGCAGGCAT CTCCAAGGGG AAATTTGGAT CAGCAACACC ATTAGGACAA 13756 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCATCAGTAC TTGCAGGCAT CTCCAAGGGG AAATTTGGAT CAGCAACACC ATTAGGACAA 180 AAGACAACCC TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT 13816 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGACAACCC TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT 240 TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG 13876 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG 300 CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA 13936 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA 360 CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA 13996 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA 420 ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT 14056 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT 480 CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG 14116 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG 540 GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA 14176 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA 600 GTCTGACATG TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT 14236 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCTGACATG TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT 660 GCCATCTTAG TT 14248 |||||||||| || GCCATCTTAG TT 672 hqPGS_C08HBa0235H18.1+_SGN-E268624- (13577 14248) ******************************************************************************** EST sequence 809 -strand 697 n (File: SGN-E375347-) 1 ATAAAGTAAA AGTGAATATT TAAAAAACTG AGCTATTAAG ATTTTTCATT ACGGTAGAGA 61 TCAGTTGACT AATTGAGGCG ATTTAAAATG AAGAAACTCA AATTCACTTG GCCACTTCAT 121 CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTGGATCAGC AACACCATTA GGACAAAAGA 181 CAACCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA TCGTCTTGTG 241 GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT GTAGGGCCAC 301 ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC 361 CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG 421 CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT 481 CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA 541 GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT 601 GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA 661 TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTG Predicted gene structure (within gDNA segment 12971 to 14877): Exon 1 13581 14277 ( 697 n); cDNA 1 697 ( 697 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E375347- 1.000 697 1.000 C PGS_C08HBa0235H18.1+_SGN-E375347- (13581 14277) Alignment (genomic DNA sequence = upper lines): ATAAAGTAAA AGTGAATATT TAAAAAACTG AGCTATTAAG ATTTTTCATT ACGGTAGAGA 13640 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAAAGTAAA AGTGAATATT TAAAAAACTG AGCTATTAAG ATTTTTCATT ACGGTAGAGA 60 TCAGTTGACT AATTGAGGCG ATTTAAAATG AAGAAACTCA AATTCACTTG GCCACTTCAT 13700 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAGTTGACT AATTGAGGCG ATTTAAAATG AAGAAACTCA AATTCACTTG GCCACTTCAT 120 CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTGGATCAGC AACACCATTA GGACAAAAGA 13760 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTGGATCAGC AACACCATTA GGACAAAAGA 180 CAACCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA TCGTCTTGTG 13820 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA TCGTCTTGTG 240 GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT GTAGGGCCAC 13880 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT GTAGGGCCAC 300 ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC 13940 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC 360 CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG 14000 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG 420 CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT 14060 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT 480 CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA 14120 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA 540 GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT 14180 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT 600 GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA 14240 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA 660 TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTG 14277 |||||||||| |||||||||| |||||||||| ||||||| TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTG 697 hqPGS_C08HBa0235H18.1+_SGN-E375347- (13581 14277) ******************************************************************************** EST sequence 746 -strand 526 n (File: SGN-E255494-) 1 AAGTAAAAGT GAATATTTAA AAAACTGAGC TATTAAGATT TTTCATTACG GTAGAGATCA 61 GTTGACTAAT TGAGGCGATT TAAAATGAAG AAACTCAAAT TCACTTGGCC ACTTCATCAG 121 TACTTGCAGG CATCTCCAAG GGGAAATTTG GATCAGCAAC ACCATTAGGA CAAAAGACAA 181 CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT TGTAGGATCG TCTTGTGGGT 241 AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA CAACTCTGTA GGGCCACATG 301 GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT ACAAGGGTTG TTACATCCTC 361 CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT GGCCGTGCAA TGAATTGCGT 421 GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT TGGAATATTA AATCCATCGA 481 CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGC Predicted gene structure (within gDNA segment 12974 to 14709): Exon 1 13584 14109 ( 526 n); cDNA 1 526 ( 526 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E255494- 1.000 526 1.000 C PGS_C08HBa0235H18.1+_SGN-E255494- (13584 14109) Alignment (genomic DNA sequence = upper lines): AAGTAAAAGT GAATATTTAA AAAACTGAGC TATTAAGATT TTTCATTACG GTAGAGATCA 13643 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTAAAAGT GAATATTTAA AAAACTGAGC TATTAAGATT TTTCATTACG GTAGAGATCA 60 GTTGACTAAT TGAGGCGATT TAAAATGAAG AAACTCAAAT TCACTTGGCC ACTTCATCAG 13703 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGACTAAT TGAGGCGATT TAAAATGAAG AAACTCAAAT TCACTTGGCC ACTTCATCAG 120 TACTTGCAGG CATCTCCAAG GGGAAATTTG GATCAGCAAC ACCATTAGGA CAAAAGACAA 13763 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACTTGCAGG CATCTCCAAG GGGAAATTTG GATCAGCAAC ACCATTAGGA CAAAAGACAA 180 CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT TGTAGGATCG TCTTGTGGGT 13823 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT TGTAGGATCG TCTTGTGGGT 240 AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA CAACTCTGTA GGGCCACATG 13883 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA CAACTCTGTA GGGCCACATG 300 GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT ACAAGGGTTG TTACATCCTC 13943 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT ACAAGGGTTG TTACATCCTC 360 CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT GGCCGTGCAA TGAATTGCGT 14003 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT GGCCGTGCAA TGAATTGCGT 420 GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT TGGAATATTA AATCCATCGA 14063 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT TGGAATATTA AATCCATCGA 480 CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGC 14109 |||||||||| |||||||||| |||||||||| |||||||||| |||||| CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGC 526 hqPGS_C08HBa0235H18.1+_SGN-E255494- (13584 14109) ******************************************************************************** EST sequence 923 -strand 558 n (File: SGN-E206119-) 1 AAAAGTGAAT ATTTAAAAAA CTGAGCTATT AAGATTTTTC ATTACGGTAG AGATCAGTTG 61 ACTAATTGAG GCGATTTAAA ATGAAGAAAC TCAAATTCAC TTGGCCACTT CATCAGTACT 121 TCAGGCATTC TCCAAGGGGA AATTTGGATC AGCAACACCA TTAGGACAAA AGACAACCCT 181 ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT 241 ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 301 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 361 TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 421 TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 481 AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 541 TGGGGGTTTG CCCCATCC Predicted gene structure (within gDNA segment 12978 to 14745): Exon 1 13588 14145 ( 558 n); cDNA 1 558 ( 558 n); score: 0.994 MATCH C08HBa0235H18.1+ SGN-E206119- 0.994 558 1.000 C PGS_C08HBa0235H18.1+_SGN-E206119- (13588 14145) Alignment (genomic DNA sequence = upper lines): AAAAGTGAAT ATTTAAAAAA CTGAGCTATT AAGATTTTTC ATTACGGTAG AGATCAGTTG 13647 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAGTGAAT ATTTAAAAAA CTGAGCTATT AAGATTTTTC ATTACGGTAG AGATCAGTTG 60 ACTAATTGAG GCGATTTAAA ATGAAGAAAC TCAAATTCAC TTGGCCACTT CATCAGTACT 13707 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTAATTGAG GCGATTTAAA ATGAAGAAAC TCAAATTCAC TTGGCCACTT CATCAGTACT 120 TGCAGGCA-T CTCCAAGGGG AAATTTGGAT CAGCAACACC ATTAGGACAA AAGACAACCC 13766 | |||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| T-CAGGCATT CTCCAAGGGG AAATTTGGAT CAGCAACACC ATTAGGACAA AAGACAACCC 179 TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 13826 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 239 TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 13886 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 299 CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 13946 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 359 GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 14006 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 419 ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 14066 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 479 AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT 14126 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT 539 TTGGGGGTTT GCCCCATCC 14145 |||||||||| ||||||||| TTGGGGGTTT GCCCCATCC 558 hqPGS_C08HBa0235H18.1+_SGN-E206119- (13588 14145) ******************************************************************************** EST sequence 1087 -strand 579 n (File: SGN-E396772-) 1 AAAGGGAATA TTAAAAAAAC TGAGCTATTA AGATTTTTCA TTACGGTAGA GATCAGTTGA 61 CTAATTGAGG CGATTTAAAA TGAAGAAACT CAAATTCACT TGGCCACTTC ATCAGTACTT 121 GCAGGCATCT CCAAGGGGAA ATTTGGATCA GCAACACCAT TAGGACAAAA GACAACCCTA 181 TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA 241 TAAGCATCGG GACATATTTT CTTGAAAAAT TTGGACAACT ATGTAGGGCC ACATGGACCT 301 TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGCCGTTACA TCCTCCCGGT 361 ACCCTATGGG CGCGCGGACA TTCACCATTT ATATCGGCCG TGCAATGAAT TGCGTGACAT 421 TTTCCTCCAA TAGGTTATGA CGGGGCAAAA GTCAATGGAT TATCAAATCC ATCGCCTGAA 481 GAAATCTTCC TCAAATTTAA GTTGATAAAT TGGTGCAAGG GGTATTCGGC TACGGTGTAA 541 GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCA Predicted gene structure (within gDNA segment 12862 to 14767): Exon 1 13589 14167 ( 579 n); cDNA 1 579 ( 579 n); score: 0.943 MATCH C08HBa0235H18.1+ SGN-E396772- 0.943 579 1.000 C PGS_C08HBa0235H18.1+_SGN-E396772- (13589 14167) Alignment (genomic DNA sequence = upper lines): AAAGTGAATA TTTAAAAAAC TGAGCTATTA AGATTTTTCA TTACGGTAGA GATCAGTTGA 13648 |||| ||||| || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGGGAATA TTAAAAAAAC TGAGCTATTA AGATTTTTCA TTACGGTAGA GATCAGTTGA 60 CTAATTGAGG CGATTTAAAA TGAAGAAACT CAAATTCACT TGGCCACTTC ATCAGTACTT 13708 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAATTGAGG CGATTTAAAA TGAAGAAACT CAAATTCACT TGGCCACTTC ATCAGTACTT 120 GCAGGCATCT CCAAGGGGAA ATTTGGATCA GCAACACCAT TAGGACAAAA GACAACCCTA 13768 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGGCATCT CCAAGGGGAA ATTTGGATCA GCAACACCAT TAGGACAAAA GACAACCCTA 180 TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA 13828 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA 240 TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT 13888 |||||||||| ||||| |||| |||||||||| |||||||||| ||||||||| |||||||||| TAAGCATCGG GACATATTTT CTTGAAAAAT TTGGACAACT ATGTAGGGCC ACATGGACCT 300 TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 13948 |||||||||| |||||||||| |||||||||| |||||||||| || |||||| |||||| ||| TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGCCGTTACA TCCTCCCGGT 360 ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 14008 ||| || ||| |||| ||||| |||||||||| |||| ||||| |||||||||| |||||||||| ACCCTATGGG CGCGCGGACA TTCACCATTT ATATCGGCCG TGCAATGAAT TGCGTGACAT 420 TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 14068 ||||||||| |||||| || ||||||||| |||| |||| ||| |||||| |||| || || TTTCCTCCAA TAGGTTATGA CGGGGCAAAA GTCAATGGAT TATCAAATCC ATCGCCTGAA 480 GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 14128 ||||| | || |||| ||| |||| |||| |||| ||||| ||| ||||| || ||||| GAAATCTTCC TCAAATTTAA GTTGATAAAT TGGTGCAAGG GGTATTCGGC TACGGTGTAA 540 GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCA 14167 |||||||||| |||||||||| |||||||||| ||||||||| GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCA 579 hqPGS_C08HBa0235H18.1+_SGN-E396772- (13589 14167) ******************************************************************************** EST sequence 499 -strand 709 n (File: SGN-E350897-) 1 TTAAAAAACT GAGCTATAAA GATTTTCATT ACGGTAGAGA TCAGTTGACT AATGAGGCGA 61 TTAAAATGAG AACTNNCAAT TTCACTTGGC CACTTCATCA GTACTTGCAG GCATCTCAAG 121 GGGAATTNGG GATCAGCACA CCCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA 181 CCAGGGGCAA GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA 241 TCTTTTCTTG AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA 301 TTGTTGTCCT CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG 361 AGGACATTCA CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG 421 TTTTGTTGGG GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA 481 ATCTAAGTTG CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA 541 TCCGGTACAC TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC 601 ATTAAAGTTG CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC TCGGAGCATT 661 GATGACCCAT GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGA Predicted gene structure (within gDNA segment 12990 to 14911): Exon 1 13600 14311 ( 712 n); cDNA 1 709 ( 709 n); score: 0.971 MATCH C08HBa0235H18.1+ SGN-E350897- 0.971 712 1.004 C PGS_C08HBa0235H18.1+_SGN-E350897- (13600 14311) Alignment (genomic DNA sequence = upper lines): TTAAAAAACT GAGCTATTAA GATTTTTCAT TACGGTAGAG ATCAGTTGAC TAATTGAGGC 13659 |||||||||| ||||||| || || ||||||| |||||||||| |||||||||| ||| |||||| TTAAAAAACT GAGCTATAAA GA-TTTTCAT TACGGTAGAG ATCAGTTGAC TAA-TGAGGC 58 GATTTAAAAT GAAGAAACTC AAATTCACTT GGCCACTTCA TCAGTACTTG CAGGCATCTC 13719 || ||||||| || | | || ||||||| |||||||||| |||||||||| ||||||||| GA-TTAAAAT GAGAACTNNC AATTTCACTT GGCCACTTCA TCAGTACTTG CAGGCATCT- 116 CAAGGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG ACAACCCTAT AGTTTGTACT 13779 ||||||||| | ||||||| || ||||| |||||||||| |||||||||| |||||||||| CAAGGGGAAT TNGGGATCAG CACACCCATT AGGACAAAAG ACAACCCTAT AGTTTGTACT 176 ACCACCA-GG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA TAAGCATCGG 13838 ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCACCAGGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA TAAGCATCGG 236 GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT TGGGTGCAAC 13898 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT TGGGTGCAAC 296 AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACCTTAAGGG 13958 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACCTTAAGGG 356 CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC 14018 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC 416 TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC 14078 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC 476 AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC 14138 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC 536 CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG 14198 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG 596 CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG 14258 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG 656 CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC GGA 14311 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC GGA 709 hqPGS_C08HBa0235H18.1+_SGN-E350897- (13600 14311) ******************************************************************************** EST sequence 514 -strand 503 n (File: SGN-E350782-) 1 TTTTTTTTTT TTTTTTTTGA GCTATTAAGA TTTTTCATTA CGGTAGAGAT CAGTTGACTA 61 ATTGAGGCGA TTTAAAATGA AGAAACTCAA ATTCACTTGG CCACTTCATC AGTACTTGCA 121 GGCATCTCCA AGGGGAAATT TGGATCAGCA ACACCATTAG GACAAAAGAC AACCCTATAG 181 TTTGTACTAC CACCAGGGCA AGTAAATGTG CTTGTAGGAT CGTCTTGTGG GTAGCTATAA 241 GCATCGGGAC ATCTTTTCTT GAAAAATTTG GACAACTCTG TAGGGCCACA TGGACCTTGG 301 GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC 361 TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT 421 CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 481 ATGTCCCAAA AATCTAAGTT GCT Predicted gene structure (within gDNA segment 12829 to 14694): Exon 1 13609 14094 ( 486 n); cDNA 18 503 ( 486 n); score: 1.000 PPA cDNA 17 1 MATCH C08HBa0235H18.1+ SGN-E350782- 1.000 486 0.966 C PGS_C08HBa0235H18.1+_SGN-E350782- (13609 14094) Alignment (genomic DNA sequence = upper lines): TGAGCTATTA AGATTTTTCA TTACGGTAGA GATCAGTTGA CTAATTGAGG CGATTTAAAA 13668 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAGCTATTA AGATTTTTCA TTACGGTAGA GATCAGTTGA CTAATTGAGG CGATTTAAAA 77 TGAAGAAACT CAAATTCACT TGGCCACTTC ATCAGTACTT GCAGGCATCT CCAAGGGGAA 13728 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAGAAACT CAAATTCACT TGGCCACTTC ATCAGTACTT GCAGGCATCT CCAAGGGGAA 137 ATTTGGATCA GCAACACCAT TAGGACAAAA GACAACCCTA TAGTTTGTAC TACCACCAGG 13788 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTGGATCA GCAACACCAT TAGGACAAAA GACAACCCTA TAGTTTGTAC TACCACCAGG 197 GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA TAAGCATCGG GACATCTTTT 13848 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA TAAGCATCGG GACATCTTTT 257 CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT TGGGTGCAAC AATATTGTTG 13908 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT TGGGTGCAAC AATATTGTTG 317 TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACCTTAAGGG CGCGAGGACA 13968 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACCTTAAGGG CGCGAGGACA 377 TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT 14028 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT 437 TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA 14088 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA 497 GTTGCT 14094 |||||| GTTGCT 503 hqPGS_C08HBa0235H18.1+_SGN-E350782- (13609 14094) ******************************************************************************** EST sequence 653 -strand 654 n (File: SGN-E212616-) 1 AGCTATTAAG ATTTTCATTA CGGGTAGAGA TCAGTTGACT AATTGAGGCG ATTTAAAATG 61 AAGAAACTCA AATTCACTTG GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT 121 TGGATCAGCA ACACCATTAG GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA 181 AGTAAATGTG CTTGTAGGAT CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT 241 GAAAAATTTG GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC 301 TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC 361 ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG 421 GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT 481 GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG GGTTTGCCCC ATCCGGTACA 541 CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT CTGCCTGCAG CATTAAAGTT 601 GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC CTCGGAGCAT TGAT Predicted gene structure (within gDNA segment 12803 to 14865): Exon 1 13611 14265 ( 655 n); cDNA 1 654 ( 654 n); score: 0.993 MATCH C08HBa0235H18.1+ SGN-E212616- 0.993 655 1.002 C PGS_C08HBa0235H18.1+_SGN-E212616- (13611 14265) Alignment (genomic DNA sequence = upper lines): AGCTATTAAG ATTTTTCATT ACG-GTAGAG ATCAGTTGAC TAATTGAGGC GATTTAAAAT 13669 |||||||||| | |||||||| ||| |||||| |||||||||| |||||||||| |||||||||| AGCTATTAAG A-TTTTCATT ACGGGTAGAG ATCAGTTGAC TAATTGAGGC GATTTAAAAT 59 GAAGAAACTC AAATTCACTT GGCCACTTCA TCAGTACTTG CAGGCATCTC CAAGGGGAAA 13729 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGAAACTC AAATTCACTT GGCCACTTCA TCAGTACTTG CAGGCATCTC CAAGGGGAAA 119 TTTGGATCAG CAACACCATT AGGACAAAAG ACAACCCTAT AGTTTGTACT ACCACCAGGG 13789 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| -TTGGATCAG CAACACCATT AGGACAAAAG ACAACCCTAT AGTTTGTACT ACCACCAGGG 178 CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC 13849 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC 238 TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT 13909 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT 298 CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT 13969 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT 358 TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT 14029 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT 418 GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG 14089 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG 478 TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA 14149 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA 538 CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG 14209 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG 598 TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGAT 14265 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGAT 654 hqPGS_C08HBa0235H18.1+_SGN-E212616- (13611 14265) ******************************************************************************** EST sequence 683 -strand 753 n (File: SGN-E212205-) 1 TAAGATTTTC ATTACGGTAG AGATCAGTTG ACTAATTGAG GCGATTTAAA TGAAGAAACT 61 CAAATTCACT TGGCCACTTC ATCAGTACTT GCAGGCATCT CCAAGGGGAA ATTTGGATCA 121 GCAACACCAT TAGGACAAAA GACAACCCTA TAGTTTGTAC TACCACCANG GGCAAGTAAA 181 TGTGCTTGTA GGATCGTCTT GTGGGTAGCT ATAAGCATCG GGACATCTTT TCTTGAAAAA 241 TTTGGACAAC TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT GTCCTCCAAA 301 CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT 361 TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA 421 AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA 481 CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA 541 GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC 601 AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG 661 GCCTCGATTG AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG 721 ACAGTTGTTG CGTACCTCAA TAGTGGCAGC ATA Predicted gene structure (within gDNA segment 12963 to 14970): Exon 1 13617 14370 ( 754 n); cDNA 1 753 ( 753 n); score: 0.994 MATCH C08HBa0235H18.1+ SGN-E212205- 0.994 754 1.001 C PGS_C08HBa0235H18.1+_SGN-E212205- (13617 14370) Alignment (genomic DNA sequence = upper lines): TAAGATTTTT CATTACGGTA GAGATCAGTT GACTAATTGA GGCGATTTAA AATGAAGAAA 13676 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| TAAGA-TTTT CATTACGGTA GAGATCAGTT GACTAATTGA GGCGATTT-A AATGAAGAAA 58 CTCAAATTCA CTTGGCCACT TCATCAGTAC TTGCAGGCAT CTCCAAGGGG AAATTTGGAT 13736 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCAAATTCA CTTGGCCACT TCATCAGTAC TTGCAGGCAT CTCCAAGGGG AAATTTGGAT 118 CAGCAACACC ATTAGGACAA AAGACAACCC TATAGTTTGT ACTACCACCA -GGGCAAGTA 13795 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| CAGCAACACC ATTAGGACAA AAGACAACCC TATAGTTTGT ACTACCACCA NGGGCAAGTA 178 AATGTGCTTG TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT TTTCTTGAAA 13855 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGTGCTTG TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT TTTCTTGAAA 238 AATTTGGACA ACTCTGTAGG GCCACATGGA CCTTGGGTGC AACAATATTG TTGTCCTCCA 13915 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTTGGACA ACTCTGTAGG GCCACATGGA CCTTGGGTGC AACAATATTG TTGTCCTCCA 298 AACGTGGTAC AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG ACATTCACCA 13975 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACGTGGTAC AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG ACATTCACCA 358 TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT TGTTGGGGCA 14035 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT TGTTGGGGCA 418 AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA 14095 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA 478 AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC GGTACACTGT 14155 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC GGTACACTGT 538 AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT AAAGTTGCAA 14215 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT AAAGTTGCAA 598 CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT GACCCATGTT 14275 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT GACCCATGTT 658 TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA AACGGTGTAT 14335 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA AACGGTGTAT 718 GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATA 14370 |||||||||| |||||||||| |||||||||| ||||| GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATA 753 hqPGS_C08HBa0235H18.1+_SGN-E212205- (13617 14370) ******************************************************************************** EST sequence 540 -strand 750 n (File: SGN-E263617-) 1 TTTCATTACG GTAGAGATCA GTTGACTAAT GNAGGCGATT TAAAATGAAG AAACTCAAAT 61 TCACTTGGCC ACTTCATCAG TACTTGCAGG CATCTCCAAG GGGAAATTTG GATCAGCAAC 121 ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT 181 TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA 241 CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT 301 ACAAGGGTTG TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT 361 GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT 421 TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC 481 CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC 541 ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG 601 ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG TTTGGCCTCG 661 ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT ATGGACAGTT 721 GTTGCGTACC TCAATAGTGG CAGCATAAGT Predicted gene structure (within gDNA segment 13014 to 14973): Exon 1 13624 14373 ( 750 n); cDNA 1 750 ( 750 n); score: 0.997 MATCH C08HBa0235H18.1+ SGN-E263617- 0.997 750 1.000 C PGS_C08HBa0235H18.1+_SGN-E263617- (13624 14373) Alignment (genomic DNA sequence = upper lines): TTTCATTACG GTAGAGATCA GTTGACTAAT TGAGGCGATT TAAAATGAAG AAACTCAAAT 13683 |||||||||| |||||||||| |||||||||| |||||||| |||||||||| |||||||||| TTTCATTACG GTAGAGATCA GTTGACTAAT GNAGGCGATT TAAAATGAAG AAACTCAAAT 60 TCACTTGGCC ACTTCATCAG TACTTGCAGG CATCTCCAAG GGGAAATTTG GATCAGCAAC 13743 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACTTGGCC ACTTCATCAG TACTTGCAGG CATCTCCAAG GGGAAATTTG GATCAGCAAC 120 ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT 13803 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT 180 TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA 13863 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA 240 CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT 13923 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT 300 ACAAGGGTTG TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT 13983 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAGGGTTG TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT 360 GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT 14043 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT 420 TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC 14103 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC 480 CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC 14163 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC 540 ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG 14223 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG 600 ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG TTTGGCCTCG 14283 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG TTTGGCCTCG 660 ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT ATGGACAGTT 14343 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT ATGGACAGTT 720 GTTGCGTACC TCAATAGTGG CAGCATAAGT 14373 |||||||||| |||||||||| |||||||||| GTTGCGTACC TCAATAGTGG CAGCATAAGT 750 hqPGS_C08HBa0235H18.1+_SGN-E263617- (13624 14373) ******************************************************************************** EST sequence 1209 -strand 805 n (File: SGN-E260562-) 1 TTCATTACGG TAGAGATCAG TGACTAATGA GGGCGATTAA AATGAGAAAA CTCAAATTCA 61 CTNGGCCACT TCATCAGTAC TGCAGGGCAT CTCCAAGGGG AAATTTGGAT CAGCAACACC 121 ATTAGGACAA AAGACAACCC TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT 181 AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA 241 CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA 301 AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC 361 CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG 421 AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA 481 GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC 541 ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC 601 CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG ACCCATGTTT GGCCTCGATT 661 GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA ACGGTGTATG GACAGTTGTT 721 GCGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACACAA AGAAGGAAGA AGAGAACAAA 781 AGAAGATGTC AAGTAGCCCA TGTTT Predicted gene structure (within gDNA segment 12252 to 15031): Exon 1 13625 14431 ( 807 n); cDNA 1 805 ( 805 n); score: 0.986 MATCH C08HBa0235H18.1+ SGN-E260562- 0.986 807 1.002 C PGS_C08HBa0235H18.1+_SGN-E260562- (13625 14431) Alignment (genomic DNA sequence = upper lines): TTCATTACGG TAGAGATCAG TTGACTAATT GAGGCGATTT AAAATGAAGA AACTCAAATT 13684 |||||||||| |||||||||| |||||||| ||||| || ||||||| | |||||||||| TTCATTACGG TAGAGATCAG -TGACTAATG AGGGCGA-TT AAAATGAGAA AACTCAAATT 58 CACTTGGCCA CTTCATCAGT ACTTGCA-GG CATCTCCAAG GGGAAATTTG GATCAGCAAC 13743 |||| ||||| |||||||||| || |||| || |||||||||| |||||||||| |||||||||| CACTNGGCCA CTTCATCAGT AC-TGCAGGG CATCTCCAAG GGGAAATTTG GATCAGCAAC 117 ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT 13803 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT 177 TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA 13863 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA 237 CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT 13923 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT 297 ACAAGGGTTG TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT 13983 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAGGGTTG TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT 357 GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT 14043 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT 417 TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC 14103 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC 477 CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC 14163 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC 537 ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG 14223 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG 597 ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG TTTGGCCTCG 14283 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG TTTGGCCTCG 657 ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT ATGGACAGTT 14343 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT ATGGACAGTT 717 GTTGCGTACC TCAATAGTGG CAGCATAAGT ATAAGTCACA CAAAGAAGGA AGAAGAGAAC 14403 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGCGTACC TCAATAGTGG CAGCATAAGT ATAAGTCACA CAAAGAAGGA AGAAGAGAAC 777 AAAAGAAGAT GTCAAGTAGC CCATGTTT 14431 |||||||||| |||||||||| |||||||| AAAAGAAGAT GTCAAGTAGC CCATGTTT 805 hqPGS_C08HBa0235H18.1+_SGN-E260562- (13625 14431) ******************************************************************************** EST sequence 546 -strand 567 n (File: SGN-E252885-) 1 ATTACGGTAG AGATCAGTTG ACTAATTGAG GCGATTTAAA ATGAAGAAAC TCAAATTCAC 61 TTGGCCACTT CATCAGTACT TGCAGGCATC TCCAAGGGGA AATTTGGATC AGCAACACCA 121 TTAGGACAAA AGACAACCCT ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA 181 GGATCGTCTT GTGGGTAGCT ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC 241 TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA 301 GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC 361 GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 421 ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 481 GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 541 CAATCACCAG TATGACATGT ACCTCTG Predicted gene structure (within gDNA segment 13018 to 14938): Exon 1 13628 14194 ( 567 n); cDNA 1 567 ( 567 n); score: 0.998 MATCH C08HBa0235H18.1+ SGN-E252885- 0.998 567 1.000 C PGS_C08HBa0235H18.1+_SGN-E252885- (13628 14194) Alignment (genomic DNA sequence = upper lines): ATTACGGTAG AGATCAGTTG ACTAATTGAG GCGATTTAAA ATGAAGAAAC TCAAATTCAC 13687 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTACGGTAG AGATCAGTTG ACTAATTGAG GCGATTTAAA ATGAAGAAAC TCAAATTCAC 60 TTGGCCACTT CATCAGTACT TGCAGGCATC TCCAAGGGGA AATTTGGATC AGCAACACCA 13747 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGCCACTT CATCAGTACT TGCAGGCATC TCCAAGGGGA AATTTGGATC AGCAACACCA 120 TTAGGACAAA AGACAACCCT ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA 13807 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAGGACAAA AGACAACCCT ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA 180 GGATCGTCTT GTGGGTAGCT ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC 13867 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGATCGTCTT GTGGGTAGCT ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC 240 TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA 13927 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA 300 GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC 13987 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC 360 GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 14047 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 420 ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 14107 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 480 GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 14167 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 540 CAATCACCAG TCTGACATGT ACCTCTG 14194 |||||||||| | |||||||| ||||||| CAATCACCAG TATGACATGT ACCTCTG 567 hqPGS_C08HBa0235H18.1+_SGN-E252885- (13628 14194) ******************************************************************************** EST sequence 1085 -strand 536 n (File: SGN-E398465-) 1 ACGGTAGAGA TCAGTTGACT AATTGAGGTG ATTTAAAATG AAGAAACTCA AATTCACTTC 61 GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT CAGGATCAGC AACACCAGTA 121 GGACAAAAGA CAACCCTATA GTTAGTACTA CCACCAGGGC AAGTAAATGC GCCTGTAGGA 181 TAGTATTGTG GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTAT 241 GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTCTTGTC CTCCAAACGT GGTACAAGGG 301 CCGGTACATC CTCCAGGTAC CCTAAGGGCG AGAGGACATT CACCACTTAT ATTGGCCGTG 361 CAATGAATCG CGTGACATTT TCCTCCAATA GGTTTTGACG GGGCAAAAGT CATTGGAATA 421 TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATTTAAGT TGCTAAACTG GTCCAAGGCG 481 TATTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACC Predicted gene structure (within gDNA segment 13021 to 14766): Exon 1 13631 14166 ( 536 n); cDNA 1 536 ( 536 n); score: 0.955 MATCH C08HBa0235H18.1+ SGN-E398465- 0.955 536 1.000 C PGS_C08HBa0235H18.1+_SGN-E398465- (13631 14166) Alignment (genomic DNA sequence = upper lines): ACGGTAGAGA TCAGTTGACT AATTGAGGCG ATTTAAAATG AAGAAACTCA AATTCACTTG 13690 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| ||||||||| ACGGTAGAGA TCAGTTGACT AATTGAGGTG ATTTAAAATG AAGAAACTCA AATTCACTTC 60 GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTGGATCAGC AACACCATTA 13750 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| ||||||| || GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT CAGGATCAGC AACACCAGTA 120 GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA 13810 |||||||||| |||||||||| ||| |||||| |||||||||| ||||||||| || ||||||| GGACAAAAGA CAACCCTATA GTTAGTACTA CCACCAGGGC AAGTAAATGC GCCTGTAGGA 180 TCGTCTTGTG GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT 13870 | || ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | TAGTATTGTG GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTAT 240 GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 13930 |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTCTTGTC CTCCAAACGT GGTACAAGGG 300 TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 13990 | |||||| |||||||||| | |||||||| ||||||||| ||||| |||| |||||||||| CCGGTACATC CTCCAGGTAC CCTAAGGGCG AGAGGACATT CACCACTTAT ATTGGCCGTG 360 CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 14050 |||||||| | |||||||||| ||||||| || ||||||| | |||||||||| |||||||||| CAATGAATCG CGTGACATTT TCCTCCAATA GGTTTTGACG GGGCAAAAGT CATTGGAATA 420 TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 14110 |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATTTAAGT TGCTAAACTG GTCCAAGGCG 480 TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACC 14166 || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| TATTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACC 536 hqPGS_C08HBa0235H18.1+_SGN-E398465- (13631 14166) ******************************************************************************** EST sequence 485 -strand 786 n (File: SGN-E210798-) 1 GGTAGAGATC AGTTGACTAA TGAGGGCGAT TTAAAATGAA GAAACTCAAA TTCACTTGGC 61 CACTTCATCA GTACTTGCAG GCATCTCCAA GGGGAAATTT GGATCAGCAA CACCATTAGG 121 ACAAAAGACA ACCCTATAGT TTGTACTACC ACCANGGGCA AGTAAATGTG CTTGTAGGAT 181 CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG GACAACTCTG 241 TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT 301 TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC 361 AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT 421 TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT 481 ACTCGGCTAG GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT 541 CACCAGTCTG ACATGTACCT CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA 601 TACGTGCCAT CTTAGTTCCC CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC 661 GTCGACCACC GCCTATCGGA GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA 721 CCTCAATAGT GGCAGCATAA GTATAAGTCA CACAAAGAAG GAAGAAGAGA ACAAAAGAAG 781 ATGTCA Predicted gene structure (within gDNA segment 13023 to 15017): Exon 1 13633 14417 ( 785 n); cDNA 1 786 ( 786 n); score: 0.993 MATCH C08HBa0235H18.1+ SGN-E210798- 0.993 785 0.999 C PGS_C08HBa0235H18.1+_SGN-E210798- (13633 14417) Alignment (genomic DNA sequence = upper lines): GGTAGAGATC AGTTGACTAA TTGAGGCGAT TTAAAATGAA GAAACTCAAA TTCACTTGGC 13692 |||||||||| |||||||||| | |||||| |||||||||| |||||||||| |||||||||| GGTAGAGATC AGTTGACTAA TGAGGGCGAT TTAAAATGAA GAAACTCAAA TTCACTTGGC 60 CACTTCATCA GTACTTGCAG GCATCTCCAA GGGGAAATTT GGATCAGCAA CACCATTAGG 13752 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACTTCATCA GTACTTGCAG GCATCTCCAA GGGGAAATTT GGATCAGCAA CACCATTAGG 120 ACAAAAGACA ACCCTATAGT TTGTACTACC ACCA-GGGCA AGTAAATGTG CTTGTAGGAT 13811 |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| ACAAAAGACA ACCCTATAGT TTGTACTACC ACCANGGGCA AGTAAATGTG CTTGTAGGAT 180 CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG GACAACTCTG 13871 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG GACAACTCTG 240 TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT 13931 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT 300 TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC 13991 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC 360 AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT 14051 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT 420 TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT 14111 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT 480 ACTCGGCTAG GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT 14171 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTCGGCTAG GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT 540 CACCAGTCTG ACATGTACCT CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA 14231 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCAGTCTG ACATGTACCT CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA 600 TACGTGCCAT CTTAGTTCCC CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC 14291 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACGTGCCAT CTTAGTTCCC CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC 660 GTCGACCACC GCCTATCGGA GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA 14351 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCGACCACC GCCTATCGGA GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA 720 CCTCAATAGT GGCAGCATAA GTATAAGTCA CACAAAGAAG GAAGAAGAGA ACAAAAGAAG 14411 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCAATAGT GGCAGCATAA GTATAAGTCA CACAAAGAAG GAAGAAGAGA ACAAAAGAAG 780 ATGTCA 14417 |||||| ATGTCA 786 hqPGS_C08HBa0235H18.1+_SGN-E210798- (13633 14417) ******************************************************************************** EST sequence 697 -strand 726 n (File: SGN-E213837-) 1 GGTAGAGATC AGTTGACTAA TGNAGGCGAT TTAAAATGAA GAAACTCAAA TTCACTTGGC 61 CACTTCATCA GTACTTGCAG GCATCTCCAA GGGGAAATTT GGATCAGCAA CACCATTAGG 121 ACAAAAGACA ACCNTATAGT TTGTACTACC ACCAGGGCAA GTAAATGTGC TTGTAGGATC 181 GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG AAAAATTTGG ACAACTCTGT 241 AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT CCAAACGTGG TACAAGGGTT 301 GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA 361 ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG GCAAAAGTCA TTGGAATATT 421 AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG CTAAACTGGT CCAAGGCGTA 481 CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC TGTAAGACTC CACCACAATC 541 ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG CAACCAGTAC GACCCCATAT 601 ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG 661 TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG TATGGACAGT TGTTGCGTAC 721 CTCAAT Predicted gene structure (within gDNA segment 13023 to 14958): Exon 1 13633 14358 ( 726 n); cDNA 1 726 ( 726 n); score: 0.996 MATCH C08HBa0235H18.1+ SGN-E213837- 0.996 726 1.000 C PGS_C08HBa0235H18.1+_SGN-E213837- (13633 14358) Alignment (genomic DNA sequence = upper lines): GGTAGAGATC AGTTGACTAA TTGAGGCGAT TTAAAATGAA GAAACTCAAA TTCACTTGGC 13692 |||||||||| |||||||||| | ||||||| |||||||||| |||||||||| |||||||||| GGTAGAGATC AGTTGACTAA TGNAGGCGAT TTAAAATGAA GAAACTCAAA TTCACTTGGC 60 CACTTCATCA GTACTTGCAG GCATCTCCAA GGGGAAATTT GGATCAGCAA CACCATTAGG 13752 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACTTCATCA GTACTTGCAG GCATCTCCAA GGGGAAATTT GGATCAGCAA CACCATTAGG 120 ACAAAAGACA ACCCTATAGT TTGTACTACC ACCAGGGCAA GTAAATGTGC TTGTAGGATC 13812 |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAAAGACA ACCNTATAGT TTGTACTACC ACCAGGGCAA GTAAATGTGC TTGTAGGATC 180 GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG AAAAATTTGG ACAACTCTGT 13872 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG AAAAATTTGG ACAACTCTGT 240 AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT CCAAACGTGG TACAAGGGTT 13932 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT CCAAACGTGG TACAAGGGTT 300 GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA 13992 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA 360 ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG GCAAAAGTCA TTGGAATATT 14052 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG GCAAAAGTCA TTGGAATATT 420 AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG CTAAACTGGT CCAAGGCGTA 14112 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG CTAAACTGGT CCAAGGCGTA 480 CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC TGTAAGACTC CACCACAATC 14172 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC TGTAAGACTC CACCACAATC 540 ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG CAACCAGTAC GACCCCATAT 14232 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG CAACCAGTAC GACCCCATAT 600 ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG 14292 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG 660 TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG TATGGACAGT TGTTGCGTAC 14352 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG TATGGACAGT TGTTGCGTAC 720 CTCAAT 14358 |||||| CTCAAT 726 hqPGS_C08HBa0235H18.1+_SGN-E213837- (13633 14358) ******************************************************************************** EST sequence 1095 -strand 533 n (File: SGN-E209133-) 1 GGTAGAGATC AGTTGACTAA TTGAGGCGAT TTAAAATGAA GAAACTCAAA TTCACTTGGC 61 CACTTCATCA GTACTTGCAG GCATCTCCAA GGGGAAATTT GGATCAGCAA CACCATTAGG 121 ACAAAAGACA ACCCTATAGT TTGTACTACC ACCAGGGCAA GTAAATGTGC TTGTAGGATC 181 GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG AAAAATTTGG ACAACTCTGT 241 AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT CCAAACGTGG TACAAGGGTT 301 GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA 361 ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG GCAAAAGTCA TGGAATATTA 421 AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGCGTAC 481 TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC ACC Predicted gene structure (within gDNA segment 13023 to 14766): Exon 1 13633 14166 ( 534 n); cDNA 1 533 ( 533 n); score: 0.998 MATCH C08HBa0235H18.1+ SGN-E209133- 0.998 534 1.002 C PGS_C08HBa0235H18.1+_SGN-E209133- (13633 14166) Alignment (genomic DNA sequence = upper lines): GGTAGAGATC AGTTGACTAA TTGAGGCGAT TTAAAATGAA GAAACTCAAA TTCACTTGGC 13692 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTAGAGATC AGTTGACTAA TTGAGGCGAT TTAAAATGAA GAAACTCAAA TTCACTTGGC 60 CACTTCATCA GTACTTGCAG GCATCTCCAA GGGGAAATTT GGATCAGCAA CACCATTAGG 13752 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACTTCATCA GTACTTGCAG GCATCTCCAA GGGGAAATTT GGATCAGCAA CACCATTAGG 120 ACAAAAGACA ACCCTATAGT TTGTACTACC ACCAGGGCAA GTAAATGTGC TTGTAGGATC 13812 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAAAGACA ACCCTATAGT TTGTACTACC ACCAGGGCAA GTAAATGTGC TTGTAGGATC 180 GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG AAAAATTTGG ACAACTCTGT 13872 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG AAAAATTTGG ACAACTCTGT 240 AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT CCAAACGTGG TACAAGGGTT 13932 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT CCAAACGTGG TACAAGGGTT 300 GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA 13992 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA 360 ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG GCAAAAGTCA TTGGAATATT 14052 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG GCAAAAGTCA -TGGAATATT 419 AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG CTAAACTGGT CCAAGGCGTA 14112 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG CTAAACTGGT CCAAGGCGTA 479 CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC TGTAAGACTC CACC 14166 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC TGTAAGACTC CACC 533 hqPGS_C08HBa0235H18.1+_SGN-E209133- (13633 14166) ******************************************************************************** EST sequence 168 +strand 803 n (File: SGN-E540205+) 1 TTTTTTTTTT GTGATGATGT GACTTTTATT CATGTAATTA TATTAGGTTT ATTACAAGCC 61 AATTATATAA CTCGACTACT TCAAGCAATT TAAAAGAAAG TGACTCAATT TTACTTAGCC 121 TCTTCATCAC TTGAGGGCAT CTCCAAGGGG AAATTTGGGC TAGTAACACC ATTAGGACAA 181 AAAACAACCC TATAATTTGT ACTACCACTA GGGCAAGTAA ATGTGCTAGT AGGATCATCT 241 TGTGGGTAGC TATACGCATC AGGACATCTT TGTTTGAAAA ATCTCGACAA ATCAGTAGGG 301 CCACATGGAC CTTGTGTGCA ACAATATTGT TGTCCTCCGA ACGTGGTACA AGGATTGTTA 361 CATCCTCCGG GTACCCTAAG TGAACCAGGA CATTCACCAT TTATATTAGC CGTACAATGA 421 ATTGCATGGC ATTTCCCTCC ACTAGGATTG GTCGGGGCGA AAGTCATTGG AATATTAAAT 481 CCATCGACTA AAGAAATGTC CCAGAAATCT AGGTTGCTAA ACTGGTCCAA GGCGTACTCG 541 GCCAGGGTGT TTGGTGGTTT GCCCCACCCG GTACATTGCA AGACCCCACC ACAATCACCA 601 GTCTGACATG AACCTCTACC AGCACCATCA AAGTTGCAAT TCGTACGACC CCATATACGT 661 GCCATCTTAG TGCCCCTCGG TGCATTGATG ACCCATGTTT GGCCTCGATC AAGACGTCGA 721 CCACCGCCTA TTGNGGTCGA CGCCGCCCAG ACGGTGTATG GACAGTTGTT GCGTACCTCG 781 AAAGTGGCAG CATAAGTGTA AGT Predicted gene structure (within gDNA segment 11762 to 15637): Exon 1 13640 14379 ( 740 n); cDNA 67 803 ( 737 n); score: 0.888 PPA cDNA 12 1 MATCH C08HBa0235H18.1+ SGN-E540205+ 0.888 740 0.922 C PGS_C08HBa0235H18.1+_SGN-E540205+ (13640 14379) Alignment (genomic DNA sequence = upper lines): ATCAGTTGAC TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT GGCCACTTCA 13699 || | | ||| || || | || |||||||| ||| |||| || || |||| ||| ||||| ATAACTCGAC TACTTCAAGC AATTTAAAAG AAAGTGACTC AATTTTACTT AGCCTCTTCA 126 TCAGTACTTG CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG 13759 || ||||| |||||||| |||||||||| ||||| || ||||||||| ||||||||| TC---ACTTG AGGGCATCTC CAAGGGGAAA TTTGGGCTAG TAACACCATT AGGACAAAAA 183 ACAACCCTAT AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT 13819 |||||||||| | |||||||| ||||| |||| |||||||||| |||| ||||| ||| |||||| ACAACCCTAT AATTTGTACT ACCACTAGGG CAAGTAAATG TGCTAGTAGG ATCATCTTGT 243 GGGTAGCTAT AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA 13879 |||||||||| | ||||| || |||||||| ||||||||| | ||||| || ||||||||| GGGTAGCTAT ACGCATCAGG ACATCTTTGT TTGAAAAATC TCGACAAATC AGTAGGGCCA 303 CATGGACCTT GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT 13939 |||||||||| | |||||||| |||||||||| ||||| |||| |||||||||| ||||||||| CATGGACCTT GTGTGCAACA ATATTGTTGT CCTCCGAACG TGGTACAAGG ATTGTTACAT 363 CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT 13999 ||||| |||| || |||| | | ||||||| |||||||||| |||| ||||| ||||||||| CCTCCGGGTA CCCTAAGTGA ACCAGGACAT TCACCATTTA TATTAGCCGT ACAATGAATT 423 GCGTGACATT TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA 14059 || || |||| | |||||||| ||| || || ||||| |||| |||||||||| |||||||||| GCATGGCATT TCCCTCCACT AGGATTGGTC GGGGCGAAAG TCATTGGAAT ATTAAATCCA 483 TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT 14119 |||||||||| |||||||||| ||||||| | |||||||||| |||||||||| ||||||||| TCGACTAAAG AAATGTCCCA GAAATCTAGG TTGCTAAACT GGTCCAAGGC GTACTCGGCC 543 AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC 14179 |||||||||| | |||||||| ||| |||||| || || |||| | |||||||| |||||||||| AGGGTGTTTG GTGGTTTGCC CCACCCGGTA CATTGCAAGA CCCCACCACA ATCACCAGTC 603 TGACATGTAC CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC 14239 ||||||| || |||| || || | ||| |||| |||||| | |||||||||| |||||||||| TGACATGAAC CTCTACCAGC ACCATCAAAG TTGCAATTCG TACGACCCCA TATACGTGCC 663 ATCTTAGTTC CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA 14299 |||||||| | ||||||| || |||||||||| |||||||||| |||||| || |||||||||| ATCTTAGTGC CCCTCGGTGC ATTGATGACC CATGTTTGGC CTCGATCAAG ACGTCGACCA 723 CCGCCTATCG GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA 14359 |||||||| | ||||| || |||||| ||| |||||||||| |||||||||| |||||| | | CCGCCTATTG NGGTCGACGC CGCCCAGACG GTGTATGGAC AGTTGTTGCG TACCTCGAAA 783 GTGGCAGCAT AAGTATAAGT 14379 |||||||||| |||| ||||| GTGGCAGCAT AAGTGTAAGT 803 hqPGS_C08HBa0235H18.1+_SGN-E540205+ (13640 14379) ******************************************************************************** EST sequence 1043 -strand 741 n (File: SGN-E355282-) 1 TTTTTTTNNT CGAAAACAAC ATATTTGTGA TGATGTGACT TTTATTCATG TAATTATATT 61 AGGTTTATTA CAAGCCAATT ATATAACTCG ACTACTTCAA GCAATTTAAA AGAAAGTGAC 121 TCAATTTTAC TTAGCCTCTT CATCACTTGA GGGCATCTCC AAGGGGAAAT TTGGGCTAGT 181 AACACCATTA GGACAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTAAATGT 241 GCTAGTAGGA TCATCTTGTG GGTAGCTATA CGCATCAGGA CATCTTTGTT TGAAAAATCT 301 CGACAAATCA GTAGGGCCAC ATGGACCTTG TGTGCAACAA TATTGTTGTC CTCCGAACGT 361 GGTACAAGGA TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGACATT CACCATTTAT 421 ATTAGCCGTA CAATGAATTG CATGGCATTT CCCTCCACTA GGATTGGTCG GGGCGAAAGT 481 CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAG AAATCTAGGT TGCTAAACTG 541 GTCCAAGGCG TACTCGGCCA GGGTGTTTGG TGGTTTGCCC CACCCGGTAC ATTGCAAGAC 601 CCCACCACAA TCACCAGTCT GACATGAACC TCTACCAGCA CCATCAAAGT TGCAATTCGT 661 ACGACCCCAT ATACGTGCCA TCTTAGTGCC CCTCGGTGCA TTGATGACCC ATGTTTGGCC 721 TCGATCAAGA CGTCGACCAC C Predicted gene structure (within gDNA segment 11592 to 15045): Exon 1 13640 14301 ( 662 n); cDNA 83 741 ( 659 n); score: 0.887 MATCH C08HBa0235H18.1+ SGN-E355282- 0.887 662 0.893 C PGS_C08HBa0235H18.1+_SGN-E355282- (13640 14301) Alignment (genomic DNA sequence = upper lines): ATCAGTTGAC TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT GGCCACTTCA 13699 || | | ||| || || | || |||||||| ||| |||| || || |||| ||| ||||| ATAACTCGAC TACTTCAAGC AATTTAAAAG AAAGTGACTC AATTTTACTT AGCCTCTTCA 142 TCAGTACTTG CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG 13759 || ||||| |||||||| |||||||||| ||||| || ||||||||| ||||||||| TC---ACTTG AGGGCATCTC CAAGGGGAAA TTTGGGCTAG TAACACCATT AGGACAAAAA 199 ACAACCCTAT AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT 13819 |||||||||| | |||||||| ||||| |||| |||||||||| |||| ||||| ||| |||||| ACAACCCTAT AATTTGTACT ACCACTAGGG CAAGTAAATG TGCTAGTAGG ATCATCTTGT 259 GGGTAGCTAT AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA 13879 |||||||||| | ||||| || |||||||| ||||||||| | ||||| || ||||||||| GGGTAGCTAT ACGCATCAGG ACATCTTTGT TTGAAAAATC TCGACAAATC AGTAGGGCCA 319 CATGGACCTT GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT 13939 |||||||||| | |||||||| |||||||||| ||||| |||| |||||||||| ||||||||| CATGGACCTT GTGTGCAACA ATATTGTTGT CCTCCGAACG TGGTACAAGG ATTGTTACAT 379 CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT 13999 ||||| |||| || |||| | | ||||||| |||||||||| |||| ||||| ||||||||| CCTCCGGGTA CCCTAAGTGA ACCAGGACAT TCACCATTTA TATTAGCCGT ACAATGAATT 439 GCGTGACATT TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA 14059 || || |||| | |||||||| ||| || || ||||| |||| |||||||||| |||||||||| GCATGGCATT TCCCTCCACT AGGATTGGTC GGGGCGAAAG TCATTGGAAT ATTAAATCCA 499 TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT 14119 |||||||||| |||||||||| ||||||| | |||||||||| |||||||||| ||||||||| TCGACTAAAG AAATGTCCCA GAAATCTAGG TTGCTAAACT GGTCCAAGGC GTACTCGGCC 559 AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC 14179 |||||||||| | |||||||| ||| |||||| || || |||| | |||||||| |||||||||| AGGGTGTTTG GTGGTTTGCC CCACCCGGTA CATTGCAAGA CCCCACCACA ATCACCAGTC 619 TGACATGTAC CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC 14239 ||||||| || |||| || || | ||| |||| |||||| | |||||||||| |||||||||| TGACATGAAC CTCTACCAGC ACCATCAAAG TTGCAATTCG TACGACCCCA TATACGTGCC 679 ATCTTAGTTC CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA 14299 |||||||| | ||||||| || |||||||||| |||||||||| |||||| || |||||||||| ATCTTAGTGC CCCTCGGTGC ATTGATGACC CATGTTTGGC CTCGATCAAG ACGTCGACCA 739 CC 14301 || CC 741 hqPGS_C08HBa0235H18.1+_SGN-E355282- (13640 14301) ******************************************************************************** EST sequence 832 -strand 672 n (File: SGN-E352685-) 1 ACTTTTATTC ATGTAATTAT ATTAGGTTTA TTACAAGCCA ATTATATAAC TCGACTACTT 61 CAAGCAATTT AAAAGAAAGT GACTCAATTT TACTTAGCCT CTTCATCACT TGAGGGCATC 121 TCCAAGGGGA AATTTGGGCT AGTAACACCA TTAGGACAAA AAACAACCCT ATAATTTGTA 181 CTACCACTAG GGCAAGTAAA TGTGCTAGTA GGATCATCTT GTGGGTAGCT ATACGCATCA 241 GGACATCTTT GTTTGAAAAA TCTCGACAAA TCAGTAGGGC CACATGGACC TTGTGTGCAA 301 CAATATTGTT GTCCTCCGAA CGTGGTACAA GGATTGTTAC ATCCTCCGGG TACCCTAAGT 361 GAACCAGGAC ATTCACCATT TATATTAGCC GTACAATGAA TTGCATGGCA TTTCCCTCCA 421 CTAGGATTGG TCGGGGCGAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC 481 CAGAAATCTA GGTTGCTAAA CTGGTCCAAG GCGTACTCGG CCAGGGTGTT TGGTGGTTTG 541 CCCCACCCGG TACATTGCAA GACCCCACCA CAATCACCAG TCTGACATGA ACCTCTACCA 601 GCACCATCAA AGTTGCAATT CGTACGACCC CATATACGTG CCATCTTAGT GCCCCTCGGT 661 GCATTGATGA CC Predicted gene structure (within gDNA segment 11962 to 16228): Exon 1 13640 14269 ( 630 n); cDNA 46 672 ( 627 n); score: 0.884 MATCH C08HBa0235H18.1+ SGN-E352685- 0.884 630 0.938 C PGS_C08HBa0235H18.1+_SGN-E352685- (13640 14269) Alignment (genomic DNA sequence = upper lines): ATCAGTTGAC TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT GGCCACTTCA 13699 || | | ||| || || | || |||||||| ||| |||| || || |||| ||| ||||| ATAACTCGAC TACTTCAAGC AATTTAAAAG AAAGTGACTC AATTTTACTT AGCCTCTTCA 105 TCAGTACTTG CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG 13759 || ||||| |||||||| |||||||||| ||||| || ||||||||| ||||||||| TC---ACTTG AGGGCATCTC CAAGGGGAAA TTTGGGCTAG TAACACCATT AGGACAAAAA 162 ACAACCCTAT AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT 13819 |||||||||| | |||||||| ||||| |||| |||||||||| |||| ||||| ||| |||||| ACAACCCTAT AATTTGTACT ACCACTAGGG CAAGTAAATG TGCTAGTAGG ATCATCTTGT 222 GGGTAGCTAT AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA 13879 |||||||||| | ||||| || |||||||| ||||||||| | ||||| || ||||||||| GGGTAGCTAT ACGCATCAGG ACATCTTTGT TTGAAAAATC TCGACAAATC AGTAGGGCCA 282 CATGGACCTT GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT 13939 |||||||||| | |||||||| |||||||||| ||||| |||| |||||||||| ||||||||| CATGGACCTT GTGTGCAACA ATATTGTTGT CCTCCGAACG TGGTACAAGG ATTGTTACAT 342 CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT 13999 ||||| |||| || |||| | | ||||||| |||||||||| |||| ||||| ||||||||| CCTCCGGGTA CCCTAAGTGA ACCAGGACAT TCACCATTTA TATTAGCCGT ACAATGAATT 402 GCGTGACATT TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA 14059 || || |||| | |||||||| ||| || || ||||| |||| |||||||||| |||||||||| GCATGGCATT TCCCTCCACT AGGATTGGTC GGGGCGAAAG TCATTGGAAT ATTAAATCCA 462 TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT 14119 |||||||||| |||||||||| ||||||| | |||||||||| |||||||||| ||||||||| TCGACTAAAG AAATGTCCCA GAAATCTAGG TTGCTAAACT GGTCCAAGGC GTACTCGGCC 522 AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC 14179 |||||||||| | |||||||| ||| |||||| || || |||| | |||||||| |||||||||| AGGGTGTTTG GTGGTTTGCC CCACCCGGTA CATTGCAAGA CCCCACCACA ATCACCAGTC 582 TGACATGTAC CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC 14239 ||||||| || |||| || || | ||| |||| |||||| | |||||||||| |||||||||| TGACATGAAC CTCTACCAGC ACCATCAAAG TTGCAATTCG TACGACCCCA TATACGTGCC 642 ATCTTAGTTC CCCTCGGAGC ATTGATGACC 14269 |||||||| | ||||||| || |||||||||| ATCTTAGTGC CCCTCGGTGC ATTGATGACC 672 hqPGS_C08HBa0235H18.1+_SGN-E352685- (13640 14269) ******************************************************************************** EST sequence 110 +strand 667 n (File: SGN-E302617+) 1 TTTTTTTTTT TGTGATGATG TGACTTTTAT TCATGTAATT ATATTAGGTT TATTACAAGC 61 CAATTATATA ACTCGACTAC TTCAAGCAAT TTAAAAGAAA GTGACTCAAT TTTACTTAGC 121 CTCTTCATCA CTTGAGGGCA TCTCCAAGGG GAAATTTGGG CTAGTAACAC CATTAGGACA 181 AAAAACAACC CTATAATTTG TACTACCACT AGGGCAAGTA AATGTGCTAG TAGGATCATC 241 TTGTGGGTAG CTATACGCAT CAGGACATCT TTGTTTGAAA AATCTCGACA AATCAGTAGG 301 GCCACATGGA CCTTGTGTGC AACAATATTG TTGTCCTCCG AACGTGGTAC AAGGATTGTT 361 ACATCCTCCG GGTACCCTAA GTGAACCAGG ACATTCACCA TTTATATTAG CCGTACAATG 421 AATTGCATGG CATTTCCCTC CACTAGGATT GGTCGGGGCG AAAGTCATTG GAATATTAAA 481 TCCATCGACT AAAGAAATGT CCCAGAAATC TAGGTTGCTA AACTGGTCCA AGGCGTACTC 541 GGCCAGGGTG TTTGGTGGTT TGCCCCACCC GGTACATTGC AAGACCCCAC CACAATCACC 601 AGTCTGACAT GAACCTCTAC CAGCACCATC AAAGTTGCAA TTCGTACGAC CCCATATACG 661 TGCCATC Predicted gene structure (within gDNA segment 11752 to 15968): Exon 1 13640 14242 ( 603 n); cDNA 68 667 ( 600 n); score: 0.882 PPA cDNA 13 1 MATCH C08HBa0235H18.1+ SGN-E302617+ 0.882 603 0.904 C PGS_C08HBa0235H18.1+_SGN-E302617+ (13640 14242) Alignment (genomic DNA sequence = upper lines): ATCAGTTGAC TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT GGCCACTTCA 13699 || | | ||| || || | || |||||||| ||| |||| || || |||| ||| ||||| ATAACTCGAC TACTTCAAGC AATTTAAAAG AAAGTGACTC AATTTTACTT AGCCTCTTCA 127 TCAGTACTTG CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG 13759 || ||||| |||||||| |||||||||| ||||| || ||||||||| ||||||||| TC---ACTTG AGGGCATCTC CAAGGGGAAA TTTGGGCTAG TAACACCATT AGGACAAAAA 184 ACAACCCTAT AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT 13819 |||||||||| | |||||||| ||||| |||| |||||||||| |||| ||||| ||| |||||| ACAACCCTAT AATTTGTACT ACCACTAGGG CAAGTAAATG TGCTAGTAGG ATCATCTTGT 244 GGGTAGCTAT AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA 13879 |||||||||| | ||||| || |||||||| ||||||||| | ||||| || ||||||||| GGGTAGCTAT ACGCATCAGG ACATCTTTGT TTGAAAAATC TCGACAAATC AGTAGGGCCA 304 CATGGACCTT GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT 13939 |||||||||| | |||||||| |||||||||| ||||| |||| |||||||||| ||||||||| CATGGACCTT GTGTGCAACA ATATTGTTGT CCTCCGAACG TGGTACAAGG ATTGTTACAT 364 CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT 13999 ||||| |||| || |||| | | ||||||| |||||||||| |||| ||||| ||||||||| CCTCCGGGTA CCCTAAGTGA ACCAGGACAT TCACCATTTA TATTAGCCGT ACAATGAATT 424 GCGTGACATT TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA 14059 || || |||| | |||||||| ||| || || ||||| |||| |||||||||| |||||||||| GCATGGCATT TCCCTCCACT AGGATTGGTC GGGGCGAAAG TCATTGGAAT ATTAAATCCA 484 TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT 14119 |||||||||| |||||||||| ||||||| | |||||||||| |||||||||| ||||||||| TCGACTAAAG AAATGTCCCA GAAATCTAGG TTGCTAAACT GGTCCAAGGC GTACTCGGCC 544 AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC 14179 |||||||||| | |||||||| ||| |||||| || || |||| | |||||||| |||||||||| AGGGTGTTTG GTGGTTTGCC CCACCCGGTA CATTGCAAGA CCCCACCACA ATCACCAGTC 604 TGACATGTAC CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC 14239 ||||||| || |||| || || | ||| |||| |||||| | |||||||||| |||||||||| TGACATGAAC CTCTACCAGC ACCATCAAAG TTGCAATTCG TACGACCCCA TATACGTGCC 664 ATC 14242 ||| ATC 667 hqPGS_C08HBa0235H18.1+_SGN-E302617+ (13640 14242) ******************************************************************************** EST sequence 555 -strand 580 n (File: SGN-E295156-) 1 TTTTTTTTTT TGTGATGATG TGACTTTTAT TCATGTAATT ATATTAGGTT TATNCCAAGC 61 CAATTATATA ACTCGACTAC TTCAAGCAAT TTAAAAGAAA GTGACTCAAT TTTACTTAGC 121 CTCTTCATCA CTTGAGGGCA TCTCCAAGGG GAAATTTGGG CTAGTAACAC CATTAGGACA 181 AAAAACAACC CTATAATTTG TACTACCACT AGGGCAAGTA AATGTGCTAG TAGGATCATC 241 TTGTGGGTAG CTATACGCAT CAGGACATCT TTGTTTGAAA AATCTCGACA AATCAGTAGG 301 GCCACATGGA CCTTGTGTGC AACAATATTG TTGTCCTCCG AACGTGGTAC AAGGATTGTT 361 ACATCCTCCG GGTACCCTAA GTGAACCAGG ACATTCACCA TTTATATTAG CCGTACAATG 421 AATTGCATGG CATTTCCCTC CACTAGGATT GGTCGGGGCG AAAGTCATTG GAATATTAAA 481 TCCATCGACT AAAGAAATGT CCCAGAAATC TAGGTTGCTA AACTGGTCCA AGGCGTACTC 541 GGCCAGGGTG TTTGGTGGTT TGCCCCACCC GGTACATTGC Predicted gene structure (within gDNA segment 11742 to 15088): Exon 1 13640 14151 ( 512 n); cDNA 68 576 ( 509 n); score: 0.883 PPA cDNA 13 1 MATCH C08HBa0235H18.1+ SGN-E295156- 0.883 512 0.883 C PGS_C08HBa0235H18.1+_SGN-E295156- (13640 14151) Alignment (genomic DNA sequence = upper lines): ATCAGTTGAC TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT GGCCACTTCA 13699 || | | ||| || || | || |||||||| ||| |||| || || |||| ||| ||||| ATAACTCGAC TACTTCAAGC AATTTAAAAG AAAGTGACTC AATTTTACTT AGCCTCTTCA 127 TCAGTACTTG CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG 13759 || ||||| |||||||| |||||||||| ||||| || ||||||||| ||||||||| TC---ACTTG AGGGCATCTC CAAGGGGAAA TTTGGGCTAG TAACACCATT AGGACAAAAA 184 ACAACCCTAT AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT 13819 |||||||||| | |||||||| ||||| |||| |||||||||| |||| ||||| ||| |||||| ACAACCCTAT AATTTGTACT ACCACTAGGG CAAGTAAATG TGCTAGTAGG ATCATCTTGT 244 GGGTAGCTAT AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA 13879 |||||||||| | ||||| || |||||||| ||||||||| | ||||| || ||||||||| GGGTAGCTAT ACGCATCAGG ACATCTTTGT TTGAAAAATC TCGACAAATC AGTAGGGCCA 304 CATGGACCTT GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT 13939 |||||||||| | |||||||| |||||||||| ||||| |||| |||||||||| ||||||||| CATGGACCTT GTGTGCAACA ATATTGTTGT CCTCCGAACG TGGTACAAGG ATTGTTACAT 364 CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT 13999 ||||| |||| || |||| | | ||||||| |||||||||| |||| ||||| ||||||||| CCTCCGGGTA CCCTAAGTGA ACCAGGACAT TCACCATTTA TATTAGCCGT ACAATGAATT 424 GCGTGACATT TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA 14059 || || |||| | |||||||| ||| || || ||||| |||| |||||||||| |||||||||| GCATGGCATT TCCCTCCACT AGGATTGGTC GGGGCGAAAG TCATTGGAAT ATTAAATCCA 484 TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT 14119 |||||||||| |||||||||| ||||||| | |||||||||| |||||||||| ||||||||| TCGACTAAAG AAATGTCCCA GAAATCTAGG TTGCTAAACT GGTCCAAGGC GTACTCGGCC 544 AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CA 14151 |||||||||| | |||||||| ||| |||||| || AGGGTGTTTG GTGGTTTGCC CCACCCGGTA CA 576 hqPGS_C08HBa0235H18.1+_SGN-E295156- (13640 14151) ******************************************************************************** EST sequence 1179 -strand 563 n (File: SGN-E357673-) 1 TTTTTTTTTT GTGATGATGT GACTTTTATT CATGTAATTA TATTAGGTTT ATTACAAGCC 61 AATTATATAA CTCGACTACT TCAAGCAATT TAAAAGAAAG TGACTCAATT TTACTTAGCC 121 TCTTCATCAC TTGAGGGCAT CTCCAAGGGG AAATTTGGGC TAGTAACACC ATTAGGACAA 181 AAAACAACCC TATAATTTGT ACTACCACTA GGGCAAGTAA ATGTGCTAGT AGGATCATCT 241 TGTGGGTAGC TATACGCATC AGGACATCTT TGTTTGAAAA ATCTCGACAA ATCAGTAGGG 301 CCACATGGAC CTTGTGTGCA ACAATATTGT TGTCCTCCGA ACGTGGTACA AGGATTGTTA 361 CATCCTCCGG GTACCCTAAG TGAACCAGGA CATTCACCAT TTATATTAGC CGTACAATGA 421 ATTGCATGGC ATTTCCCTCC ACTAGGATTG GTCGGGGCGA AAGTCATTGG AATATTAAAT 481 CCATCGACTA AAGAAATGTC CCAGAAATCT AGGTTGCTAA ACTGGTCCAA GGCGTACTCG 541 GCCAGGGTGT TTGGTGGTTT GCC Predicted gene structure (within gDNA segment 11752 to 14928): Exon 1 13640 14139 ( 500 n); cDNA 67 563 ( 497 n); score: 0.882 PPA cDNA 12 1 MATCH C08HBa0235H18.1+ SGN-E357673- 0.882 500 0.888 C PGS_C08HBa0235H18.1+_SGN-E357673- (13640 14139) Alignment (genomic DNA sequence = upper lines): ATCAGTTGAC TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT GGCCACTTCA 13699 || | | ||| || || | || |||||||| ||| |||| || || |||| ||| ||||| ATAACTCGAC TACTTCAAGC AATTTAAAAG AAAGTGACTC AATTTTACTT AGCCTCTTCA 126 TCAGTACTTG CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG 13759 || ||||| |||||||| |||||||||| ||||| || ||||||||| ||||||||| TC---ACTTG AGGGCATCTC CAAGGGGAAA TTTGGGCTAG TAACACCATT AGGACAAAAA 183 ACAACCCTAT AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT 13819 |||||||||| | |||||||| ||||| |||| |||||||||| |||| ||||| ||| |||||| ACAACCCTAT AATTTGTACT ACCACTAGGG CAAGTAAATG TGCTAGTAGG ATCATCTTGT 243 GGGTAGCTAT AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA 13879 |||||||||| | ||||| || |||||||| ||||||||| | ||||| || ||||||||| GGGTAGCTAT ACGCATCAGG ACATCTTTGT TTGAAAAATC TCGACAAATC AGTAGGGCCA 303 CATGGACCTT GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT 13939 |||||||||| | |||||||| |||||||||| ||||| |||| |||||||||| ||||||||| CATGGACCTT GTGTGCAACA ATATTGTTGT CCTCCGAACG TGGTACAAGG ATTGTTACAT 363 CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT 13999 ||||| |||| || |||| | | ||||||| |||||||||| |||| ||||| ||||||||| CCTCCGGGTA CCCTAAGTGA ACCAGGACAT TCACCATTTA TATTAGCCGT ACAATGAATT 423 GCGTGACATT TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA 14059 || || |||| | |||||||| ||| || || ||||| |||| |||||||||| |||||||||| GCATGGCATT TCCCTCCACT AGGATTGGTC GGGGCGAAAG TCATTGGAAT ATTAAATCCA 483 TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT 14119 |||||||||| |||||||||| ||||||| | |||||||||| |||||||||| ||||||||| TCGACTAAAG AAATGTCCCA GAAATCTAGG TTGCTAAACT GGTCCAAGGC GTACTCGGCC 543 AGGGTGTTTG GGGGTTTGCC 14139 |||||||||| | |||||||| AGGGTGTTTG GTGGTTTGCC 563 hqPGS_C08HBa0235H18.1+_SGN-E357673- (13640 14139) ******************************************************************************** EST sequence 981 -strand 547 n (File: SGN-E354307-) 1 ATGTGACTTT TATTCATGTA ATTATATTAG GTTTATTACA AGCCAATTAT ATAACTCGAC 61 TACTTCAAGC AATTTAAAAG AAAGTGACTC AATTTTACTT AGCCTCTTCA TCACTTGAGG 121 GCATCTCCAA GGGGAAATTT GGGCTAGTAA CACCATTAGG ACAAAAAACA ACCCTATAAT 181 TTGTACTACC ACTAGGGCAA GTAAATGTGC TAGTAGGATC ATCTTGTGGG TAGCTATACG 241 CATCAGGACA TCTTTGTTTG AAAAATCTCG ACAAATCAGT AGGGCCACAT GGACCTTGTG 301 TGCAACAATA TTGTTGTCCT CCGAACGTGG TACAAGGATT GTTACATCCT CCGGGTACCC 361 TAAGTGAACC AGGACATTCA CCATTTATAT TAGCCGTACA ATGAATTGCA TGGCATTTCC 421 CTCCACTAGG ATTGGTCGGG GCGAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA 481 TGTCCCAGAA ATCTAGGTTG CTAAACTGGT CCAAGGCGTA CTCGGCCAGG GTGTTTGGTG 541 GTTTGCC Predicted gene structure (within gDNA segment 11912 to 14928): Exon 1 13640 14139 ( 500 n); cDNA 51 547 ( 497 n); score: 0.882 MATCH C08HBa0235H18.1+ SGN-E354307- 0.882 500 0.914 C PGS_C08HBa0235H18.1+_SGN-E354307- (13640 14139) Alignment (genomic DNA sequence = upper lines): ATCAGTTGAC TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT GGCCACTTCA 13699 || | | ||| || || | || |||||||| ||| |||| || || |||| ||| ||||| ATAACTCGAC TACTTCAAGC AATTTAAAAG AAAGTGACTC AATTTTACTT AGCCTCTTCA 110 TCAGTACTTG CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG 13759 ||| |||| |||||||| |||||||||| ||||| || ||||||||| ||||||||| TCA---CTTG AGGGCATCTC CAAGGGGAAA TTTGGGCTAG TAACACCATT AGGACAAAAA 167 ACAACCCTAT AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT 13819 |||||||||| | |||||||| ||||| |||| |||||||||| |||| ||||| ||| |||||| ACAACCCTAT AATTTGTACT ACCACTAGGG CAAGTAAATG TGCTAGTAGG ATCATCTTGT 227 GGGTAGCTAT AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA 13879 |||||||||| | ||||| || |||||||| ||||||||| | ||||| || ||||||||| GGGTAGCTAT ACGCATCAGG ACATCTTTGT TTGAAAAATC TCGACAAATC AGTAGGGCCA 287 CATGGACCTT GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT 13939 |||||||||| | |||||||| |||||||||| ||||| |||| |||||||||| ||||||||| CATGGACCTT GTGTGCAACA ATATTGTTGT CCTCCGAACG TGGTACAAGG ATTGTTACAT 347 CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT 13999 ||||| |||| || |||| | | ||||||| |||||||||| |||| ||||| ||||||||| CCTCCGGGTA CCCTAAGTGA ACCAGGACAT TCACCATTTA TATTAGCCGT ACAATGAATT 407 GCGTGACATT TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA 14059 || || |||| | |||||||| ||| || || ||||| |||| |||||||||| |||||||||| GCATGGCATT TCCCTCCACT AGGATTGGTC GGGGCGAAAG TCATTGGAAT ATTAAATCCA 467 TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT 14119 |||||||||| |||||||||| ||||||| | |||||||||| |||||||||| ||||||||| TCGACTAAAG AAATGTCCCA GAAATCTAGG TTGCTAAACT GGTCCAAGGC GTACTCGGCC 527 AGGGTGTTTG GGGGTTTGCC 14139 |||||||||| | |||||||| AGGGTGTTTG GTGGTTTGCC 547 hqPGS_C08HBa0235H18.1+_SGN-E354307- (13640 14139) ******************************************************************************** EST sequence 1135 -strand 563 n (File: SGN-E357558-) 1 TTTTTTTTTT GTGATGATGT GACTTTTATT CATGTAATTA TATTAGGTTT ATTACAAGCC 61 AATTATATAA CTCGACTACT TCAAGCAATT TAAAAGAAAG TGACTCAATT TTACTTAGCC 121 TCTTCATCAC TTGAGGGCAT CTCCAAGGGG AAATTTGGGC TAGTAACACC ATTAGGACAA 181 AAAACAACCC TATAATTTGT ACTACCACTA GGGCAAGTAA ATGTGCTAGT AGGATCATCT 241 TGTGGGTAGC TATACGCATC AGGACATCTT TGTTTGAAAA ATCTCGACAA ATCAGTAGGG 301 CCACATGGAC CTTGTGTGCA ACAATATTGT TGTCCTCCGA ACGTGGTACA AGGATTGTTA 361 CATCCTCCGG GTACCCTAAG TGAACCAGGA CATTCACCAT TTATATTAGC CGTACAATGA 421 ATTGCATGGC ATTTCCCTCC ACTAGGATTG GTCGGGGCGA AAGTCATTGG AATATTAAAT 481 CCATCGACTA AAGAAATGTC CCAGAAATCT AGGTTGCTAA ACTGGTCCAA GGCGTACTCG 541 GCCAGGGTGT TTGGTGGTTT GCC Predicted gene structure (within gDNA segment 11752 to 14928): Exon 1 13640 14139 ( 500 n); cDNA 67 563 ( 497 n); score: 0.882 PPA cDNA 12 1 MATCH C08HBa0235H18.1+ SGN-E357558- 0.882 500 0.888 C PGS_C08HBa0235H18.1+_SGN-E357558- (13640 14139) Alignment (genomic DNA sequence = upper lines): ATCAGTTGAC TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT GGCCACTTCA 13699 || | | ||| || || | || |||||||| ||| |||| || || |||| ||| ||||| ATAACTCGAC TACTTCAAGC AATTTAAAAG AAAGTGACTC AATTTTACTT AGCCTCTTCA 126 TCAGTACTTG CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG 13759 || ||||| |||||||| |||||||||| ||||| || ||||||||| ||||||||| TC---ACTTG AGGGCATCTC CAAGGGGAAA TTTGGGCTAG TAACACCATT AGGACAAAAA 183 ACAACCCTAT AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT 13819 |||||||||| | |||||||| ||||| |||| |||||||||| |||| ||||| ||| |||||| ACAACCCTAT AATTTGTACT ACCACTAGGG CAAGTAAATG TGCTAGTAGG ATCATCTTGT 243 GGGTAGCTAT AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA 13879 |||||||||| | ||||| || |||||||| ||||||||| | ||||| || ||||||||| GGGTAGCTAT ACGCATCAGG ACATCTTTGT TTGAAAAATC TCGACAAATC AGTAGGGCCA 303 CATGGACCTT GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT 13939 |||||||||| | |||||||| |||||||||| ||||| |||| |||||||||| ||||||||| CATGGACCTT GTGTGCAACA ATATTGTTGT CCTCCGAACG TGGTACAAGG ATTGTTACAT 363 CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT 13999 ||||| |||| || |||| | | ||||||| |||||||||| |||| ||||| ||||||||| CCTCCGGGTA CCCTAAGTGA ACCAGGACAT TCACCATTTA TATTAGCCGT ACAATGAATT 423 GCGTGACATT TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA 14059 || || |||| | |||||||| ||| || || ||||| |||| |||||||||| |||||||||| GCATGGCATT TCCCTCCACT AGGATTGGTC GGGGCGAAAG TCATTGGAAT ATTAAATCCA 483 TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT 14119 |||||||||| |||||||||| ||||||| | |||||||||| |||||||||| ||||||||| TCGACTAAAG AAATGTCCCA GAAATCTAGG TTGCTAAACT GGTCCAAGGC GTACTCGGCC 543 AGGGTGTTTG GGGGTTTGCC 14139 |||||||||| | |||||||| AGGGTGTTTG GTGGTTTGCC 563 hqPGS_C08HBa0235H18.1+_SGN-E357558- (13640 14139) ******************************************************************************** EST sequence 1187 -strand 561 n (File: SGN-E355505-) 1 TTTTTTTTTT TGTGATGATG TGACTTTTAT TCATGTAATT ATATTAGGTT TATTACAAGC 61 CAATTATATA ACTCGACTAC TTCAAGCAAT TTAAAAGAAA GTGACTCAAT TTTACTTAGC 121 CTCTTCATCA CTTGAGGGCA TCTCCAAGGG GAAATTTGGG CTAGTAACAC CATTAGGACA 181 AAAAACAACC CTATAATTTG TACTACCACT AGGGCAAGTA AATGTGCTAG TAGGATCATC 241 TTGTGGGTAG CTATACGCAT CAGGACATCT TTGTTTGAAA AATCTCGACA AATCAGTAGG 301 GCCACATGGA CCTTGTGTGC AACAATATTG TTGTCCTCCG AACGTGGTAC AAGGATTGTT 361 ACATCCTCCG GGTACCCTAA GTGAACCAGG ACATTCACCA TTTATATTAG CCGTACAATG 421 AATTGCATGG CATTTCCCTC CACTAGGATT GGTCGGGGCG AAAGTCATTG GAATATTAAA 481 TCCATCGACT AAAGAAATGT CCCAGAAATC TAGGTTGCTA AACTGGTCCA AGGCGTACTC 541 GGCCAGGGTG TTTGGTGGTT T Predicted gene structure (within gDNA segment 11742 to 14898): Exon 1 13640 14136 ( 497 n); cDNA 68 561 ( 494 n); score: 0.881 PPA cDNA 13 1 MATCH C08HBa0235H18.1+ SGN-E355505- 0.881 497 0.886 C PGS_C08HBa0235H18.1+_SGN-E355505- (13640 14136) Alignment (genomic DNA sequence = upper lines): ATCAGTTGAC TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT GGCCACTTCA 13699 || | | ||| || || | || |||||||| ||| |||| || || |||| ||| ||||| ATAACTCGAC TACTTCAAGC AATTTAAAAG AAAGTGACTC AATTTTACTT AGCCTCTTCA 127 TCAGTACTTG CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG 13759 || ||||| |||||||| |||||||||| ||||| || ||||||||| ||||||||| TC---ACTTG AGGGCATCTC CAAGGGGAAA TTTGGGCTAG TAACACCATT AGGACAAAAA 184 ACAACCCTAT AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT 13819 |||||||||| | |||||||| ||||| |||| |||||||||| |||| ||||| ||| |||||| ACAACCCTAT AATTTGTACT ACCACTAGGG CAAGTAAATG TGCTAGTAGG ATCATCTTGT 244 GGGTAGCTAT AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA 13879 |||||||||| | ||||| || |||||||| ||||||||| | ||||| || ||||||||| GGGTAGCTAT ACGCATCAGG ACATCTTTGT TTGAAAAATC TCGACAAATC AGTAGGGCCA 304 CATGGACCTT GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT 13939 |||||||||| | |||||||| |||||||||| ||||| |||| |||||||||| ||||||||| CATGGACCTT GTGTGCAACA ATATTGTTGT CCTCCGAACG TGGTACAAGG ATTGTTACAT 364 CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT 13999 ||||| |||| || |||| | | ||||||| |||||||||| |||| ||||| ||||||||| CCTCCGGGTA CCCTAAGTGA ACCAGGACAT TCACCATTTA TATTAGCCGT ACAATGAATT 424 GCGTGACATT TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA 14059 || || |||| | |||||||| ||| || || ||||| |||| |||||||||| |||||||||| GCATGGCATT TCCCTCCACT AGGATTGGTC GGGGCGAAAG TCATTGGAAT ATTAAATCCA 484 TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT 14119 |||||||||| |||||||||| ||||||| | |||||||||| |||||||||| ||||||||| TCGACTAAAG AAATGTCCCA GAAATCTAGG TTGCTAAACT GGTCCAAGGC GTACTCGGCC 544 AGGGTGTTTG GGGGTTT 14136 |||||||||| | ||||| AGGGTGTTTG GTGGTTT 561 hqPGS_C08HBa0235H18.1+_SGN-E355505- (13640 14136) ******************************************************************************** EST sequence 1197 -strand 540 n (File: SGN-E355527-) 1 TTTTTTTTTT TGTGATGATG TGACTTTTAT TCATGTAATT ATATTAGGTT TATTACAAGC 61 CAATTATATA ACTCGACTAC TTCAAGCAAT TTAAAAGAAA GTGACTCAAT TTTACTTAGC 121 CTCTTCATCA CTTGAGGGCA TCTCCAAGGG GAAATTTGGG CTAGTAACAC CATTAGGACA 181 AAAAACAACC CTATAATTTG TACTACCACT AGGGCAAGTA AATGTGCTAG TAGGATCATC 241 TTGTGGGTAG CTATACGCAT CAGGACATCT TTGTTTGAAA AATCTCGACA AATCAGTAGG 301 GCCACATGGA CCTTGTGTGC AACAATATTG TTGTCCTCCG AACGTGGTAC AAGGATTGTT 361 ACATCCTCCG GGTACCCTAA GTGAACCAGG ACATTCACCA TTTATATTAG CCGTACAATG 421 AATTGCATGG CATTTCCCTC CACTAGGATT GGTCGGGGCG AAAGTCATTG GAATATTAAA 481 TCCATCGACT AAAGAAATGT CCCAGAAATC TAGGTTGCTA AACTGGTCCA AGGCGTACTC Predicted gene structure (within gDNA segment 11742 to 14715): Exon 1 13640 14115 ( 476 n); cDNA 68 540 ( 473 n); score: 0.880 PPA cDNA 13 1 MATCH C08HBa0235H18.1+ SGN-E355527- 0.880 476 0.881 C PGS_C08HBa0235H18.1+_SGN-E355527- (13640 14115) Alignment (genomic DNA sequence = upper lines): ATCAGTTGAC TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT GGCCACTTCA 13699 || | | ||| || || | || |||||||| ||| |||| || || |||| ||| ||||| ATAACTCGAC TACTTCAAGC AATTTAAAAG AAAGTGACTC AATTTTACTT AGCCTCTTCA 127 TCAGTACTTG CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG 13759 || ||||| |||||||| |||||||||| ||||| || ||||||||| ||||||||| TC---ACTTG AGGGCATCTC CAAGGGGAAA TTTGGGCTAG TAACACCATT AGGACAAAAA 184 ACAACCCTAT AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT 13819 |||||||||| | |||||||| ||||| |||| |||||||||| |||| ||||| ||| |||||| ACAACCCTAT AATTTGTACT ACCACTAGGG CAAGTAAATG TGCTAGTAGG ATCATCTTGT 244 GGGTAGCTAT AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA 13879 |||||||||| | ||||| || |||||||| ||||||||| | ||||| || ||||||||| GGGTAGCTAT ACGCATCAGG ACATCTTTGT TTGAAAAATC TCGACAAATC AGTAGGGCCA 304 CATGGACCTT GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT 13939 |||||||||| | |||||||| |||||||||| ||||| |||| |||||||||| ||||||||| CATGGACCTT GTGTGCAACA ATATTGTTGT CCTCCGAACG TGGTACAAGG ATTGTTACAT 364 CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT 13999 ||||| |||| || |||| | | ||||||| |||||||||| |||| ||||| ||||||||| CCTCCGGGTA CCCTAAGTGA ACCAGGACAT TCACCATTTA TATTAGCCGT ACAATGAATT 424 GCGTGACATT TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA 14059 || || |||| | |||||||| ||| || || ||||| |||| |||||||||| |||||||||| GCATGGCATT TCCCTCCACT AGGATTGGTC GGGGCGAAAG TCATTGGAAT ATTAAATCCA 484 TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTC 14115 |||||||||| |||||||||| ||||||| | |||||||||| |||||||||| |||||| TCGACTAAAG AAATGTCCCA GAAATCTAGG TTGCTAAACT GGTCCAAGGC GTACTC 540 hqPGS_C08HBa0235H18.1+_SGN-E355527- (13640 14115) ******************************************************************************** EST sequence 1161 -strand 533 n (File: SGN-E357512-) 1 TTTTTTTTTT GTGATGATGT GACTTTTATT CATGTAATTA TATTAGGTTT ATTACAAGCC 61 AATTATATAA CTCGACTACT TCAAGCAATT TAAAAGAAAG TGACTCAATT TTACTTAGCC 121 TCTTCATCAC TTGAGGGCAT CTCCAAGGGG AAATTTGGGC TAGTAACACC ATTAGGACAA 181 AAAACAACCC TATAATTTGT ACTACCACTA GGGCAAGTAA ATGTGCTAGT AGGATCATCT 241 AGTGGGTAGC TATACGCATC AGGACATCTT TGTTTGAAAA ATCTCGACAA ATCAGTAGGG 301 CCACATGGAC CTTGTGTGCA ACAATATTGT TGTCCTCCGA ACGTGGTACA AGGATTGTTA 361 CATCCTCCGG GTACCCTAAG TGAACCAGGA CATTCACCAT TTATATTAGC CGTACAATGA 421 ATTGCATGGC ATTTCCCTCC ACTAGGATTG GTCGGGGCGA AAGTCATTGG AATATTAAAT 481 CCATCGACTG GAGAAATGTC CCAGAAATCT AGGTTGCTAA ACTGGTCCAA GGC Predicted gene structure (within gDNA segment 11752 to 15105): Exon 1 13640 14109 ( 470 n); cDNA 67 533 ( 467 n); score: 0.872 PPA cDNA 12 1 MATCH C08HBa0235H18.1+ SGN-E357512- 0.872 470 0.882 C PGS_C08HBa0235H18.1+_SGN-E357512- (13640 14109) Alignment (genomic DNA sequence = upper lines): ATCAGTTGAC TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT GGCCACTTCA 13699 || | | ||| || || | || |||||||| ||| |||| || || |||| ||| ||||| ATAACTCGAC TACTTCAAGC AATTTAAAAG AAAGTGACTC AATTTTACTT AGCCTCTTCA 126 TCAGTACTTG CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG 13759 || ||||| |||||||| |||||||||| ||||| || ||||||||| ||||||||| TC---ACTTG AGGGCATCTC CAAGGGGAAA TTTGGGCTAG TAACACCATT AGGACAAAAA 183 ACAACCCTAT AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT 13819 |||||||||| | |||||||| ||||| |||| |||||||||| |||| ||||| ||| ||| || ACAACCCTAT AATTTGTACT ACCACTAGGG CAAGTAAATG TGCTAGTAGG ATCATCTAGT 243 GGGTAGCTAT AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA 13879 |||||||||| | ||||| || |||||||| ||||||||| | ||||| || ||||||||| GGGTAGCTAT ACGCATCAGG ACATCTTTGT TTGAAAAATC TCGACAAATC AGTAGGGCCA 303 CATGGACCTT GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT 13939 |||||||||| | |||||||| |||||||||| ||||| |||| |||||||||| ||||||||| CATGGACCTT GTGTGCAACA ATATTGTTGT CCTCCGAACG TGGTACAAGG ATTGTTACAT 363 CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT 13999 ||||| |||| || |||| | | ||||||| |||||||||| |||| ||||| ||||||||| CCTCCGGGTA CCCTAAGTGA ACCAGGACAT TCACCATTTA TATTAGCCGT ACAATGAATT 423 GCGTGACATT TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA 14059 || || |||| | |||||||| ||| || || ||||| |||| |||||||||| |||||||||| GCATGGCATT TCCCTCCACT AGGATTGGTC GGGGCGAAAG TCATTGGAAT ATTAAATCCA 483 TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC 14109 |||||| || |||||||||| ||||||| | |||||||||| |||||||||| TCGACTGGAG AAATGTCCCA GAAATCTAGG TTGCTAAACT GGTCCAAGGC 533 hqPGS_C08HBa0235H18.1+_SGN-E357512- (13640 14109) ******************************************************************************** EST sequence 474 -strand 533 n (File: SGN-E351103-) 1 TTTTTTTTTT GTGATGATGT GACTTTTATT CATGTAATTA TATTAGGTTT ATTACAAGCC 61 AATTATATAA CTCGACTACT TCAAGCAATT TAAAAGAAAG TGACTCAATT TTACTTAGCC 121 TCTTCATCAC TTGAGGGCAT CTCCAAGGGG AAATTTGGGC TAGTAACACC ATTAGGACAA 181 AAAACAACCC TATAATTTGT ACTACCACTA GGGCAAGTAA ATGTGCTAGT AGGATCATCT 241 TGTGGGTAGC TATACGCATC AGGACATCTT TGTTTGAAAA ATCTCGACAA ATCAGTAGGG 301 CCACATGGAC CTTGTGTGCA ACAATATTGT TGTCCTCCGA ACGTGGTACA AGGATTGTTA 361 CATCCTCCGG GTACCCTAAG TGAACCAGGA CATTCACCAT TTATATTAGC CGTACAATGA 421 ATTGCATGGC ATTTCCCTCC ACTAGGATTG GTCGGGGCGA AAGTCATTGG AATATTAAAT 481 CCATCGACTA AAGAAATGTC CCAGAAATCT AGGTTGCTAA ACTGGTCCAA GGC Predicted gene structure (within gDNA segment 11752 to 14709): Exon 1 13640 14109 ( 470 n); cDNA 67 533 ( 467 n); score: 0.879 PPA cDNA 12 1 MATCH C08HBa0235H18.1+ SGN-E351103- 0.879 470 0.882 C PGS_C08HBa0235H18.1+_SGN-E351103- (13640 14109) Alignment (genomic DNA sequence = upper lines): ATCAGTTGAC TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT GGCCACTTCA 13699 || | | ||| || || | || |||||||| ||| |||| || || |||| ||| ||||| ATAACTCGAC TACTTCAAGC AATTTAAAAG AAAGTGACTC AATTTTACTT AGCCTCTTCA 126 TCAGTACTTG CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG 13759 || ||||| |||||||| |||||||||| ||||| || ||||||||| ||||||||| TC---ACTTG AGGGCATCTC CAAGGGGAAA TTTGGGCTAG TAACACCATT AGGACAAAAA 183 ACAACCCTAT AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT 13819 |||||||||| | |||||||| ||||| |||| |||||||||| |||| ||||| ||| |||||| ACAACCCTAT AATTTGTACT ACCACTAGGG CAAGTAAATG TGCTAGTAGG ATCATCTTGT 243 GGGTAGCTAT AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA 13879 |||||||||| | ||||| || |||||||| ||||||||| | ||||| || ||||||||| GGGTAGCTAT ACGCATCAGG ACATCTTTGT TTGAAAAATC TCGACAAATC AGTAGGGCCA 303 CATGGACCTT GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT 13939 |||||||||| | |||||||| |||||||||| ||||| |||| |||||||||| ||||||||| CATGGACCTT GTGTGCAACA ATATTGTTGT CCTCCGAACG TGGTACAAGG ATTGTTACAT 363 CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT 13999 ||||| |||| || |||| | | ||||||| |||||||||| |||| ||||| ||||||||| CCTCCGGGTA CCCTAAGTGA ACCAGGACAT TCACCATTTA TATTAGCCGT ACAATGAATT 423 GCGTGACATT TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA 14059 || || |||| | |||||||| ||| || || ||||| |||| |||||||||| |||||||||| GCATGGCATT TCCCTCCACT AGGATTGGTC GGGGCGAAAG TCATTGGAAT ATTAAATCCA 483 TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC 14109 |||||||||| |||||||||| ||||||| | |||||||||| |||||||||| TCGACTAAAG AAATGTCCCA GAAATCTAGG TTGCTAAACT GGTCCAAGGC 533 hqPGS_C08HBa0235H18.1+_SGN-E351103- (13640 14109) ******************************************************************************** EST sequence 506 -strand 530 n (File: SGN-E350942-) 1 TTTTTTTTTT GTGATGATGT GACTTTTATT CATGTAATTA TATTAGGTTT ATTACAAGCC 61 AATTATATAA CTCGACTACT TCAAGCAATT TAAAAGAAAG TGACTCAATT TTACTTAGCC 121 TCTTCATCAC TTGAGGGCAT CTCCAAGGGG AAATTTGGGC TAGTAACACC ATTAGGACAA 181 AAAACAACCC TATAATTTGT ACTACCACTA GGGCAAGTAA ATGTGCTAGT AGGATCATCT 241 TGTGGGTAGC TATACGCATC AGGACATCTT TGTTTGAAAA ATCTCGACAA ATCAGTAGGG 301 CCACATGGAC CTTGTGTGCA ACAATATTGT TGTCCTCCGA ACGTGGTACA AGGATTGTTA 361 CATCCTCCGG GTACCCTAAG TGAACCAGGA CATTCACCAT TTATATTAGC CGTACAATGA 421 ATTGCATGGC ATTTCCCTCC ACTAGGATTG GTCGGGGCGA AAGTCATTGG AATATTAAAT 481 CCATCGACTA AAGAAATGTC CCAGAAATCT AGGTTGCTAA ACTGGTCCAA Predicted gene structure (within gDNA segment 11752 to 14706): Exon 1 13640 14106 ( 467 n); cDNA 67 530 ( 464 n); score: 0.878 PPA cDNA 12 1 MATCH C08HBa0235H18.1+ SGN-E350942- 0.878 467 0.881 C PGS_C08HBa0235H18.1+_SGN-E350942- (13640 14106) Alignment (genomic DNA sequence = upper lines): ATCAGTTGAC TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT GGCCACTTCA 13699 || | | ||| || || | || |||||||| ||| |||| || || |||| ||| ||||| ATAACTCGAC TACTTCAAGC AATTTAAAAG AAAGTGACTC AATTTTACTT AGCCTCTTCA 126 TCAGTACTTG CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG 13759 || ||||| |||||||| |||||||||| ||||| || ||||||||| ||||||||| TC---ACTTG AGGGCATCTC CAAGGGGAAA TTTGGGCTAG TAACACCATT AGGACAAAAA 183 ACAACCCTAT AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT 13819 |||||||||| | |||||||| ||||| |||| |||||||||| |||| ||||| ||| |||||| ACAACCCTAT AATTTGTACT ACCACTAGGG CAAGTAAATG TGCTAGTAGG ATCATCTTGT 243 GGGTAGCTAT AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA 13879 |||||||||| | ||||| || |||||||| ||||||||| | ||||| || ||||||||| GGGTAGCTAT ACGCATCAGG ACATCTTTGT TTGAAAAATC TCGACAAATC AGTAGGGCCA 303 CATGGACCTT GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT 13939 |||||||||| | |||||||| |||||||||| ||||| |||| |||||||||| ||||||||| CATGGACCTT GTGTGCAACA ATATTGTTGT CCTCCGAACG TGGTACAAGG ATTGTTACAT 363 CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT 13999 ||||| |||| || |||| | | ||||||| |||||||||| |||| ||||| ||||||||| CCTCCGGGTA CCCTAAGTGA ACCAGGACAT TCACCATTTA TATTAGCCGT ACAATGAATT 423 GCGTGACATT TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA 14059 || || |||| | |||||||| ||| || || ||||| |||| |||||||||| |||||||||| GCATGGCATT TCCCTCCACT AGGATTGGTC GGGGCGAAAG TCATTGGAAT ATTAAATCCA 483 TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAA 14106 |||||||||| |||||||||| ||||||| | |||||||||| ||||||| TCGACTAAAG AAATGTCCCA GAAATCTAGG TTGCTAAACT GGTCCAA 530 hqPGS_C08HBa0235H18.1+_SGN-E350942- (13640 14106) ******************************************************************************** EST sequence 528 -strand 521 n (File: SGN-E351796-) 1 TTTTTTTTTT GTGATGATGT GACTTTTATT CATGTAATTA TATTAGGTTT ATTACAAGCC 61 AATTATATAA CTCGACTACT TCAAGCAATT TAAAAGAAAG TGACTCAATT TTACTTAGCC 121 TCTTCATCAC TTGAGGGCAT CTCCAAGGGG AAATTTGGGC TAGTAACACC ATTAGGACAA 181 AAAACAACCC TATAATTTGT ACTACCACTA GGGCAAGTAA ATGTGCTAGT AGGATCATCT 241 TGTGGGTAGC TATACGCATC AGGACATCTT TGTTTGAAAA ATCTCGACAA ATCAGTAGGG 301 CCACATGGAC CTTGTGTGCA ACAATATTGT TGTCCTCCGA ACGTGGTACA AGGATTGTTA 361 CATCCTCCGG GTACCCTAAG TGAACCAGGA CATTCACCAT TTATATTAGC CGTACAATGA 421 ATTGCATGGC ATTTCCCTCC ACTAGGATTG GTCGGGGCGA AAGTCATTGG AATATTAAAT 481 CCATCGACTA AAGAAATGTC CCAGAAATCT AGGTTGCTAA A Predicted gene structure (within gDNA segment 11752 to 14859): Exon 1 13640 14097 ( 458 n); cDNA 67 521 ( 455 n); score: 0.876 PPA cDNA 12 1 MATCH C08HBa0235H18.1+ SGN-E351796- 0.876 458 0.879 C PGS_C08HBa0235H18.1+_SGN-E351796- (13640 14097) Alignment (genomic DNA sequence = upper lines): ATCAGTTGAC TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT GGCCACTTCA 13699 || | | ||| || || | || |||||||| ||| |||| || || |||| ||| ||||| ATAACTCGAC TACTTCAAGC AATTTAAAAG AAAGTGACTC AATTTTACTT AGCCTCTTCA 126 TCAGTACTTG CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG 13759 || ||||| |||||||| |||||||||| ||||| || ||||||||| ||||||||| TC---ACTTG AGGGCATCTC CAAGGGGAAA TTTGGGCTAG TAACACCATT AGGACAAAAA 183 ACAACCCTAT AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT 13819 |||||||||| | |||||||| ||||| |||| |||||||||| |||| ||||| ||| |||||| ACAACCCTAT AATTTGTACT ACCACTAGGG CAAGTAAATG TGCTAGTAGG ATCATCTTGT 243 GGGTAGCTAT AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA 13879 |||||||||| | ||||| || |||||||| ||||||||| | ||||| || ||||||||| GGGTAGCTAT ACGCATCAGG ACATCTTTGT TTGAAAAATC TCGACAAATC AGTAGGGCCA 303 CATGGACCTT GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT 13939 |||||||||| | |||||||| |||||||||| ||||| |||| |||||||||| ||||||||| CATGGACCTT GTGTGCAACA ATATTGTTGT CCTCCGAACG TGGTACAAGG ATTGTTACAT 363 CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT 13999 ||||| |||| || |||| | | ||||||| |||||||||| |||| ||||| ||||||||| CCTCCGGGTA CCCTAAGTGA ACCAGGACAT TCACCATTTA TATTAGCCGT ACAATGAATT 423 GCGTGACATT TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA 14059 || || |||| | |||||||| ||| || || ||||| |||| |||||||||| |||||||||| GCATGGCATT TCCCTCCACT AGGATTGGTC GGGGCGAAAG TCATTGGAAT ATTAAATCCA 483 TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAA 14097 |||||||||| |||||||||| ||||||| | |||||||| TCGACTAAAG AAATGTCCCA GAAATCTAGG TTGCTAAA 521 hqPGS_C08HBa0235H18.1+_SGN-E351796- (13640 14097) ******************************************************************************** EST sequence 232 +strand 520 n (File: SGN-E295085+) 1 AGAGAACTAG TCTGAGTTTT TTTTTTTTTT TTTTTGTGAT GATGTGACTT TTATTCATGT 61 AATTATATTA GGTTTATTAC AAGCCAATTA TATAACTCGA CTACTTCAAG CAATTTAAAA 121 GAAAGTGACT CAATTTTACT TAGCCTCTTC ATCACTTGAG GGCATCTCCA AGGGGAAATT 181 TGGGCTAGTA ACACCATTAG GACAAAAAAC AACCCTATAA TTTGTACTAC CACTAGGGCA 241 AGTAAATGTG CTAGTAGGAT CATCTTGTGG GTAGCTATAC GCATCAGGAC ATCTTTGTTT 301 GAAAAATCTC GACAAATCAG TAGGGCCACA TGGACCTTGT GTGCAACAAT ATTGTTGTCC 361 TCCGAACGTG GTACAAGGAT TGTTACATCC TCCGGGTACC CTAAGTGAAC CAGGACATTC 421 ACCATTTATA TTAGCCGTAC AATGAATTGC ATGGCATTTC CCTCCACTAG GATTGGTCGG 481 GGCGAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA Predicted gene structure (within gDNA segment 11512 to 14681): Exon 1 13640 14071 ( 432 n); cDNA 92 520 ( 429 n); score: 0.873 PPA cDNA 37 17 MATCH C08HBa0235H18.1+ SGN-E295085+ 0.873 432 0.831 C PGS_C08HBa0235H18.1+_SGN-E295085+ (13640 14071) Alignment (genomic DNA sequence = upper lines): ATCAGTTGAC TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT GGCCACTTCA 13699 || | | ||| || || | || |||||||| ||| |||| || || |||| ||| ||||| ATAACTCGAC TACTTCAAGC AATTTAAAAG AAAGTGACTC AATTTTACTT AGCCTCTTCA 151 TCAGTACTTG CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG 13759 || ||||| |||||||| |||||||||| ||||| || ||||||||| ||||||||| TC---ACTTG AGGGCATCTC CAAGGGGAAA TTTGGGCTAG TAACACCATT AGGACAAAAA 208 ACAACCCTAT AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT 13819 |||||||||| | |||||||| ||||| |||| |||||||||| |||| ||||| ||| |||||| ACAACCCTAT AATTTGTACT ACCACTAGGG CAAGTAAATG TGCTAGTAGG ATCATCTTGT 268 GGGTAGCTAT AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA 13879 |||||||||| | ||||| || |||||||| ||||||||| | ||||| || ||||||||| GGGTAGCTAT ACGCATCAGG ACATCTTTGT TTGAAAAATC TCGACAAATC AGTAGGGCCA 328 CATGGACCTT GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT 13939 |||||||||| | |||||||| |||||||||| ||||| |||| |||||||||| ||||||||| CATGGACCTT GTGTGCAACA ATATTGTTGT CCTCCGAACG TGGTACAAGG ATTGTTACAT 388 CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT 13999 ||||| |||| || |||| | | ||||||| |||||||||| |||| ||||| ||||||||| CCTCCGGGTA CCCTAAGTGA ACCAGGACAT TCACCATTTA TATTAGCCGT ACAATGAATT 448 GCGTGACATT TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA 14059 || || |||| | |||||||| ||| || || ||||| |||| |||||||||| |||||||||| GCATGGCATT TCCCTCCACT AGGATTGGTC GGGGCGAAAG TCATTGGAAT ATTAAATCCA 508 TCGACTAAAG AA 14071 |||||||||| || TCGACTAAAG AA 520 hqPGS_C08HBa0235H18.1+_SGN-E295085+ (13640 14071) ******************************************************************************** EST sequence 1227 -strand 498 n (File: SGN-E349779-) 1 TTTTTTTTTT TTTTTTNTTT TTCGAAACAA CATATTTGTG ATGATGTGAC TTTTATTCAT 61 GTAATTATAT TAGGTTTATT ACAAGCCAAT TATATAACTC GACTACTTCA AGCAATTTAA 121 AAGAAAGTGA CTCAATTTTA CTTAGCCTCT TCATCACTTG AGGGCATCTC CAAGGGGAAA 181 TTTGGGCTAG TAACACCATT AGGACAAAAA ACAACCCTAT AATTTGTACT ACCACTAGGG 241 CAAGTAAATG TGCTAGTAGG ATCATCTTGT GGGTAGCTAT ACGCATCAGG ACATCTTTGT 301 TTGAAAAATC TCGACAAATC AGTAGGGCCA CATGGACCTT GTGTGCAACA ATATTGTTGT 361 CCTCCGAACG TGGTACAAGG ATTGTTACAT CCTCCGGGTA CCCTAAGTGA ACCAGGACAT 421 TCACCATTTA TATTAGCCGT ACAATGAATT GCATGGCATT TCCCTCCACT AGGATTGGTC 481 GGGGCGAAAG TCATTGGA Predicted gene structure (within gDNA segment 11482 to 15844): Exon 1 13640 14047 ( 408 n); cDNA 94 498 ( 405 n); score: 0.865 PPA cDNA 22 1 MATCH C08HBa0235H18.1+ SGN-E349779- 0.865 408 0.819 C PGS_C08HBa0235H18.1+_SGN-E349779- (13640 14047) Alignment (genomic DNA sequence = upper lines): ATCAGTTGAC TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT GGCCACTTCA 13699 || | | ||| || || | || |||||||| ||| |||| || || |||| ||| ||||| ATAACTCGAC TACTTCAAGC AATTTAAAAG AAAGTGACTC AATTTTACTT AGCCTCTTCA 153 TCAGTACTTG CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG 13759 || ||||| |||||||| |||||||||| ||||| || ||||||||| ||||||||| TC---ACTTG AGGGCATCTC CAAGGGGAAA TTTGGGCTAG TAACACCATT AGGACAAAAA 210 ACAACCCTAT AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT 13819 |||||||||| | |||||||| ||||| |||| |||||||||| |||| ||||| ||| |||||| ACAACCCTAT AATTTGTACT ACCACTAGGG CAAGTAAATG TGCTAGTAGG ATCATCTTGT 270 GGGTAGCTAT AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA 13879 |||||||||| | ||||| || |||||||| ||||||||| | ||||| || ||||||||| GGGTAGCTAT ACGCATCAGG ACATCTTTGT TTGAAAAATC TCGACAAATC AGTAGGGCCA 330 CATGGACCTT GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT 13939 |||||||||| | |||||||| |||||||||| ||||| |||| |||||||||| ||||||||| CATGGACCTT GTGTGCAACA ATATTGTTGT CCTCCGAACG TGGTACAAGG ATTGTTACAT 390 CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT 13999 ||||| |||| || |||| | | ||||||| |||||||||| |||| ||||| ||||||||| CCTCCGGGTA CCCTAAGTGA ACCAGGACAT TCACCATTTA TATTAGCCGT ACAATGAATT 450 GCGTGACATT TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGA 14047 || || |||| | |||||||| ||| || || ||||| |||| |||||||| GCATGGCATT TCCCTCCACT AGGATTGGTC GGGGCGAAAG TCATTGGA 498 hqPGS_C08HBa0235H18.1+_SGN-E349779- (13640 14047) ******************************************************************************** EST sequence 1146 -strand 335 n (File: SGN-E310110-) 1 TTTTTTTTTT GTGATGATGT GACTTTTATT CATGTAATTA TATTAGGTTT ATTACAAGCC 61 AATTATATAA CTCGACTACT TCAAGCAATT TAAAAGAAAG TGACTCAATT TTACTTAGCC 121 TCTTCATCAC TTGAGGGCAT CTCCAAGGGG AAATTTGGGC TAGTAACACC ATTAGGACAA 181 AAAACAACCC TATAATTTGT ACTACCACTA GGGCAAGTAA ATGTGCTAGT AGGATCATCT 241 TGTGGGTAGC TATACGCATC AGGACATCTT TGTTTGAAAA ATCTCGACAA ATCAGTAGGG 301 CCACATGGAC CTTGTGTGCA ACAATATTGT TGTCC Predicted gene structure (within gDNA segment 11752 to 14511): Exon 1 13640 13911 ( 272 n); cDNA 67 335 ( 269 n); score: 0.860 PPA cDNA 12 1 MATCH C08HBa0235H18.1+ SGN-E310110- 0.860 272 0.812 C PGS_C08HBa0235H18.1+_SGN-E310110- (13640 13911) Alignment (genomic DNA sequence = upper lines): ATCAGTTGAC TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT GGCCACTTCA 13699 || | | ||| || || | || |||||||| ||| |||| || || |||| ||| ||||| ATAACTCGAC TACTTCAAGC AATTTAAAAG AAAGTGACTC AATTTTACTT AGCCTCTTCA 126 TCAGTACTTG CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG 13759 || ||||| |||||||| |||||||||| ||||| || ||||||||| ||||||||| TC---ACTTG AGGGCATCTC CAAGGGGAAA TTTGGGCTAG TAACACCATT AGGACAAAAA 183 ACAACCCTAT AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT 13819 |||||||||| | |||||||| ||||| |||| |||||||||| |||| ||||| ||| |||||| ACAACCCTAT AATTTGTACT ACCACTAGGG CAAGTAAATG TGCTAGTAGG ATCATCTTGT 243 GGGTAGCTAT AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA 13879 |||||||||| | ||||| || |||||||| ||||||||| | ||||| || ||||||||| GGGTAGCTAT ACGCATCAGG ACATCTTTGT TTGAAAAATC TCGACAAATC AGTAGGGCCA 303 CATGGACCTT GGGTGCAACA ATATTGTTGT CC 13911 |||||||||| | |||||||| |||||||||| || CATGGACCTT GTGTGCAACA ATATTGTTGT CC 335 hqPGS_C08HBa0235H18.1+_SGN-E310110- (13640 13911) ******************************************************************************** EST sequence 492 -strand 321 n (File: SGN-E350856-) 1 TTTTTTTTTT GTGATGATGT GACTTTTATT CATGTAATTA TATTAGGTTT ATTACAAGCC 61 AATTATATAA CTCGACTACT TCAAGCAATT TAAAAGAAAG TGACTCAATT TTACTTAGCC 121 TCTTCATCAC TTGAGGGCAT CTCCAAGGGG AAATTTGGGC TAGTAACACC ATTAGGACAA 181 AAAACAACCC TATAATTTGT ACTACCACTA GGGCAAGTAA ATGTGCTAGT AGGATCATCT 241 TGTGGGTAGC TATACGCATC AGGACATCTT TGTTTGAAAA ATCTCGACAA ATCAGTAGGG 301 CCACATGGAC CTTGTGTGCA A Predicted gene structure (within gDNA segment 11752 to 15100): Exon 1 13640 13897 ( 258 n); cDNA 67 321 ( 255 n); score: 0.853 PPA cDNA 12 1 MATCH C08HBa0235H18.1+ SGN-E350856- 0.853 258 0.804 C PGS_C08HBa0235H18.1+_SGN-E350856- (13640 13897) Alignment (genomic DNA sequence = upper lines): ATCAGTTGAC TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT GGCCACTTCA 13699 || | | ||| || || | || |||||||| ||| |||| || || |||| ||| ||||| ATAACTCGAC TACTTCAAGC AATTTAAAAG AAAGTGACTC AATTTTACTT AGCCTCTTCA 126 TCAGTACTTG CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG 13759 || ||||| |||||||| |||||||||| ||||| || ||||||||| ||||||||| TC---ACTTG AGGGCATCTC CAAGGGGAAA TTTGGGCTAG TAACACCATT AGGACAAAAA 183 ACAACCCTAT AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT 13819 |||||||||| | |||||||| ||||| |||| |||||||||| |||| ||||| ||| |||||| ACAACCCTAT AATTTGTACT ACCACTAGGG CAAGTAAATG TGCTAGTAGG ATCATCTTGT 243 GGGTAGCTAT AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA 13879 |||||||||| | ||||| || |||||||| ||||||||| | ||||| || ||||||||| GGGTAGCTAT ACGCATCAGG ACATCTTTGT TTGAAAAATC TCGACAAATC AGTAGGGCCA 303 CATGGACCTT GGGTGCAA 13897 |||||||||| | |||||| CATGGACCTT GTGTGCAA 321 hqPGS_C08HBa0235H18.1+_SGN-E350856- (13640 13897) ******************************************************************************** EST sequence 941 -strand 558 n (File: SGN-E353160-) 1 TTTTTTTGTG ATGATGTGAC TTTTATTCAT GTAATTATAT TAGGTTTATT ACAAGCCAAT 61 TATATAAACT CGACTACTTC AAGCAATTAA AAAGAAAGTG ACTCAATTTT ACTTAGCCTC 121 TTCATCACTT GAGGGCATCT CCAAGGGGAA ATTTGGGCTA GTAACACCAT TAGGACAAAA 181 AACAACCCTA TAATTTGTAC TACCACTAGG GCAAGTAAAT GTGCTAGTAG GATCATCTTG 241 TGGGTAGCTA TACGCATCAG GACATCTTTG TTTGAAAAAT CTCGACAAAT CAGTAGGGCC 301 ACATGGACCT TGTGTGCAAC AATATTGTTG TCCTCCGAAC GTGGTACAAG GATTGTTACA 361 TCCTCCGGGT ACCCTAAGTG AACCAGGACA TTCACCATTT ATATTAGCCG TACAATGAAT 421 TGCATGGCAT TTCCCTCCAC TAGGATTGGT CGGGGCGAAA GTCATTGGAA TATTAAATCC 481 ATCGACTAAA GAAATGTCCC AGAAATCTAG GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 541 CAGGGTGTTT GGTGGTTT Predicted gene structure (within gDNA segment 11772 to 14898): Exon 1 13647 14136 ( 490 n); cDNA 72 558 ( 487 n); score: 0.884 MATCH C08HBa0235H18.1+ SGN-E353160- 0.884 490 0.878 C PGS_C08HBa0235H18.1+_SGN-E353160- (13647 14136) Alignment (genomic DNA sequence = upper lines): GACTAATTGA GGCGATTTAA AATGAAGAAA CTCAAATTCA CTTGGCCACT TCATCAGTAC 13706 ||||| || | || ||| || || ||| | ||||| || | ||| ||| || ||||| || GACTACTTCA AGCAATTAAA AAGAAAGTGA CTCAATTTTA CTTAGCCTCT TCATC---AC 128 TTGCAGGCAT CTCCAAGGGG AAATTTGGAT CAGCAACACC ATTAGGACAA AAGACAACCC 13766 ||| ||||| |||||||||| |||||||| || |||||| |||||||||| || ||||||| TTGAGGGCAT CTCCAAGGGG AAATTTGGGC TAGTAACACC ATTAGGACAA AAAACAACCC 188 TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 13826 |||| ||||| |||||||| | |||||||||| ||||||| || |||||| ||| |||||||||| TATAATTTGT ACTACCACTA GGGCAAGTAA ATGTGCTAGT AGGATCATCT TGTGGGTAGC 248 TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 13886 |||| ||||| ||||||||| | ||||||| || | ||||| || |||||| |||||||||| TATACGCATC AGGACATCTT TGTTTGAAAA ATCTCGACAA ATCAGTAGGG CCACATGGAC 308 CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 13946 |||| ||||| |||||||||| |||||||| | |||||||||| ||| |||||| |||||||| | CTTGTGTGCA ACAATATTGT TGTCCTCCGA ACGTGGTACA AGGATTGTTA CATCCTCCGG 368 GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 14006 ||||| |||| | | |||| |||||||||| ||||||| || ||| |||||| ||||| || | GTACCCTAAG TGAACCAGGA CATTCACCAT TTATATTAGC CGTACAATGA ATTGCATGGC 428 ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 14066 |||| ||||| |||||| || || ||||| | |||||||||| |||||||||| |||||||||| ATTTCCCTCC ACTAGGATTG GTCGGGGCGA AAGTCATTGG AATATTAAAT CCATCGACTA 488 AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT 14126 |||||||||| ||| |||||| | |||||||| |||||||||| |||||||||| || ||||||| AAGAAATGTC CCAGAAATCT AGGTTGCTAA ACTGGTCCAA GGCGTACTCG GCCAGGGTGT 548 TTGGGGGTTT 14136 |||| ||||| TTGGTGGTTT 558 hqPGS_C08HBa0235H18.1+_SGN-E353160- (13647 14136) ******************************************************************************** EST sequence 853 -strand 713 n (File: SGN-E214128-) 1 ATTTAAATGA AGAAACTCAA ATCACTTGGC CACTTCATCA GTACTGCAGG GCATCTCCAA 61 GGGGAAATTG GATCAGCACN ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA 121 CCAGGGCAAG TAAATGTGCT TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT 181 CTTTTCTTGA AAAATTTGGA CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT 241 TGTTGTCCTC CAAACGTGGT ACAAGGGTTG TTACATCCTC CAGGTACCTT AAGGGCGCGA 301 GGACATTCAC CATTTATATT GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT 361 TTTGTTGGGG CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA 421 TCTAAGTTGC TAAACTGGTC CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT 481 CCGGTACACT GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA 541 TTAAAGTTGC AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG 601 ATGACCCATG TTTGGCCTCG ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC 661 CAAACGGTGT ATGGACAGTT GTTGCGTACC TCAATAGTGG CAGCATAAGT ATA Predicted gene structure (within gDNA segment 13016 to 14976): Exon 1 13661 14376 ( 716 n); cDNA 1 713 ( 713 n); score: 0.987 MATCH C08HBa0235H18.1+ SGN-E214128- 0.987 716 1.004 C PGS_C08HBa0235H18.1+_SGN-E214128- (13661 14376) Alignment (genomic DNA sequence = upper lines): ATTTAAAATG AAGAAACTCA AATTCACTTG GCCACTTCAT CAGTACTTGC AGGCATCTCC 13720 ||||| |||| |||||||||| || ||||||| |||||||||| ||||||| ||||||||| ATTTA-AATG AAGAAACTCA AA-TCACTTG GCCACTTCAT CAGTACTGCA GGGCATCTCC 58 AAGGGGAAAT TTGGATCAGC AACACCATTA GGACAAAAGA CAACCCTATA GTTTGTACTA 13780 ||||||||| |||||||||| | ||||||| |||||||||| |||||||||| |||||||||| AAGGGGAAA- TTGGATCAGC ACNACCATTA GGACAAAAGA CAACCCTATA GTTTGTACTA 117 CCACCAGGGC AAGTAAATGT GCTTGTAGGA TCGTCTTGTG GGTAGCTATA AGCATCGGGA 13840 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCACCAGGGC AAGTAAATGT GCTTGTAGGA TCGTCTTGTG GGTAGCTATA AGCATCGGGA 177 CATCTTTTCT TGAAAAATTT GGACAACTCT GTAGGGCCAC ATGGACCTTG GGTGCAACAA 13900 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCTTTTCT TGAAAAATTT GGACAACTCT GTAGGGCCAC ATGGACCTTG GGTGCAACAA 237 TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 13960 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 297 CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 14020 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 357 GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 14080 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 417 AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 14140 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 477 CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 14200 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 537 GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 14260 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 597 TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATGCC 14320 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATGCC 657 GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA AGTATA 14376 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA AGTATA 713 hqPGS_C08HBa0235H18.1+_SGN-E214128- (13661 14376) ******************************************************************************** EST sequence 534 -strand 710 n (File: SGN-E263607-) 1 TCATCAGTAC TTGCAGGCAT CTCCAAGGGG AAATTTGGAT CAGCAACACC ATTAGGACAA 61 AAGACAACCN TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT 121 TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG 181 CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA 241 CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA 301 ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT 361 CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG 421 GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA 481 GTCTGACATG TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT 541 GCCATCTTAG TTCCCCTCGG AGCATTGATG ACCCATGTTT GGCCTCGATT GAGACGTCGA 601 CCACCGCCTA TCGGAGTCGA TGCCGCCCAA ACGGTGTATG GACAGTTGTT GCGTACCTCA 661 ATAGTGGCAG CATAAGTATA AGTCACACAA AGAAGGAAGA AGAGAACAAA Predicted gene structure (within gDNA segment 13087 to 15006): Exon 1 13697 14406 ( 710 n); cDNA 1 710 ( 710 n); score: 0.999 MATCH C08HBa0235H18.1+ SGN-E263607- 0.999 710 1.000 C PGS_C08HBa0235H18.1+_SGN-E263607- (13697 14406) Alignment (genomic DNA sequence = upper lines): TCATCAGTAC TTGCAGGCAT CTCCAAGGGG AAATTTGGAT CAGCAACACC ATTAGGACAA 13756 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCATCAGTAC TTGCAGGCAT CTCCAAGGGG AAATTTGGAT CAGCAACACC ATTAGGACAA 60 AAGACAACCC TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT 13816 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGACAACCN TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT 120 TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG 13876 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG 180 CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA 13936 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA 240 CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA 13996 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA 300 ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT 14056 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT 360 CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG 14116 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG 420 GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA 14176 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA 480 GTCTGACATG TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT 14236 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCTGACATG TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT 540 GCCATCTTAG TTCCCCTCGG AGCATTGATG ACCCATGTTT GGCCTCGATT GAGACGTCGA 14296 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCATCTTAG TTCCCCTCGG AGCATTGATG ACCCATGTTT GGCCTCGATT GAGACGTCGA 600 CCACCGCCTA TCGGAGTCGA TGCCGCCCAA ACGGTGTATG GACAGTTGTT GCGTACCTCA 14356 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCACCGCCTA TCGGAGTCGA TGCCGCCCAA ACGGTGTATG GACAGTTGTT GCGTACCTCA 660 ATAGTGGCAG CATAAGTATA AGTCACACAA AGAAGGAAGA AGAGAACAAA 14406 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGTGGCAG CATAAGTATA AGTCACACAA AGAAGGAAGA AGAGAACAAA 710 hqPGS_C08HBa0235H18.1+_SGN-E263607- (13697 14406) ******************************************************************************** EST sequence 1176 -strand 346 n (File: SGN-E260107-) 1 TCATCAGTAC TGGCAGGCAT CTCCAAGGGG AAATTTGGAT CAGCAACACC ATTAGGACAA 61 AAGCCAACCT TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT 121 TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG 181 CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA 241 CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA 301 ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCA Predicted gene structure (within gDNA segment 12979 to 14642): Exon 1 13697 14042 ( 346 n); cDNA 1 346 ( 346 n); score: 0.991 MATCH C08HBa0235H18.1+ SGN-E260107- 0.991 346 1.000 C PGS_C08HBa0235H18.1+_SGN-E260107- (13697 14042) Alignment (genomic DNA sequence = upper lines): TCATCAGTAC TTGCAGGCAT CTCCAAGGGG AAATTTGGAT CAGCAACACC ATTAGGACAA 13756 |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCATCAGTAC TGGCAGGCAT CTCCAAGGGG AAATTTGGAT CAGCAACACC ATTAGGACAA 60 AAGACAACCC TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT 13816 ||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGCCAACCT TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT 120 TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG 13876 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG 180 CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA 13936 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA 240 CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA 13996 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA 300 ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCA 14042 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCA 346 hqPGS_C08HBa0235H18.1+_SGN-E260107- (13697 14042) ******************************************************************************** EST sequence 520 -strand 719 n (File: SGN-E210966-) 1 CATCAGTACT GCAGGGCATC TCCAAGGGAA ATTTGGATCA GCACNACCAT TAGGACAAAA 61 GACAACCCTA TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG 121 TGGGTAGCTA TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC 181 ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 241 TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 301 TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 361 ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 421 TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 481 CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC 541 CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 601 ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT 661 AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATGTCA Predicted gene structure (within gDNA segment 12864 to 15017): Exon 1 13698 14417 ( 720 n); cDNA 1 719 ( 719 n); score: 0.990 MATCH C08HBa0235H18.1+ SGN-E210966- 0.990 720 1.001 C PGS_C08HBa0235H18.1+_SGN-E210966- (13698 14417) Alignment (genomic DNA sequence = upper lines): CATCAGTACT TGCAGGCATC TCCAAGGGGA AATTTGGATC AGCAACACCA TTAGGACAAA 13757 |||||||||| |||||| ||||| |||| |||||||||| |||| |||| |||||||||| CATCAGTACT GCAGGGCATC TCCAA-GGGA AATTTGGATC AGCACNACCA TTAGGACAAA 59 AGACAACCCT ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT 13817 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGACAACCCT ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT 119 GTGGGTAGCT ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC 13877 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGGGTAGCT ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC 179 CACATGGACC TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC 13937 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACATGGACC TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC 239 ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA 13997 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA 299 TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC 14057 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC 359 CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG 14117 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG 419 CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG 14177 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG 479 TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG 14237 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG 539 CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG AGACGTCGAC 14297 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG AGACGTCGAC 599 CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA 14357 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA 659 TAGTGGCAGC ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA GAAGATGTCA 14417 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGTGGCAGC ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA GAAGATGTCA 719 hqPGS_C08HBa0235H18.1+_SGN-E210966- (13698 14417) ******************************************************************************** EST sequence 1132 -strand 645 n (File: SGN-E258673-) 1 ATCAGTACTT GCAGGCATCT CCAAGGGGAA ATTTGGATCA GCAACACCAT TAGGACAAAA 61 AACAACCCTA TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG 121 TGGGTAGCTA TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC 181 ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 241 TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 301 TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 361 ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 421 TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 481 CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC 541 CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 601 ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTT Predicted gene structure (within gDNA segment 13089 to 14943): Exon 1 13699 14343 ( 645 n); cDNA 1 645 ( 645 n); score: 0.998 MATCH C08HBa0235H18.1+ SGN-E258673- 0.998 645 1.000 C PGS_C08HBa0235H18.1+_SGN-E258673- (13699 14343) Alignment (genomic DNA sequence = upper lines): ATCAGTACTT GCAGGCATCT CCAAGGGGAA ATTTGGATCA GCAACACCAT TAGGACAAAA 13758 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCAGTACTT GCAGGCATCT CCAAGGGGAA ATTTGGATCA GCAACACCAT TAGGACAAAA 60 GACAACCCTA TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG 13818 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACAACCCTA TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG 120 TGGGTAGCTA TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC 13878 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGGTAGCTA TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC 180 ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 13938 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 240 TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 13998 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 300 TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 14058 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 360 ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 14118 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 420 TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 14178 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 480 CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC 14238 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC 540 CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 14298 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 600 ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTT 14343 |||||||||| |||||||||| |||||||||| |||||||||| ||||| ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTT 645 hqPGS_C08HBa0235H18.1+_SGN-E258673- (13699 14343) ******************************************************************************** EST sequence 470 -strand 577 n (File: SGN-E211610-) 1 CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTGGATCAGC AACACCATTA GGACAAAAGA 61 CAACCTTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA TCGTCTTGTG 121 GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT GTAGGGCCAC 181 ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC 241 CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG 301 CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT 361 CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA 421 GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT 481 GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA 541 TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTG Predicted gene structure (within gDNA segment 13091 to 14877): Exon 1 13701 14277 ( 577 n); cDNA 1 577 ( 577 n); score: 0.998 MATCH C08HBa0235H18.1+ SGN-E211610- 0.998 577 1.000 C PGS_C08HBa0235H18.1+_SGN-E211610- (13701 14277) Alignment (genomic DNA sequence = upper lines): CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTGGATCAGC AACACCATTA GGACAAAAGA 13760 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTGGATCAGC AACACCATTA GGACAAAAGA 60 CAACCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA TCGTCTTGTG 13820 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACCTTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA TCGTCTTGTG 120 GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT GTAGGGCCAC 13880 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT GTAGGGCCAC 180 ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC 13940 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC 240 CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG 14000 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG 300 CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT 14060 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT 360 CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA 14120 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA 420 GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT 14180 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT 480 GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA 14240 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA 540 TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTG 14277 |||||||||| |||||||||| |||||||||| ||||||| TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTG 577 hqPGS_C08HBa0235H18.1+_SGN-E211610- (13701 14277) ******************************************************************************** EST sequence 531 -strand 787 n (File: SGN-E340366-) 1 CAAGCCAATT ATATAACTCG ATTACTTCAA GCAATTTAAA AGAAAGTGAC TCAATTTTAC 61 TTAGCCTCTT CATCACTTGA GGGCATCTCC AAGGGGAAAT TTGGGCTAGT AACACCATTA 121 GGACAAAAAA CAACCCNTAT AATTTGTACT ACCACTAGGG CAAGTAAATG TGCTAGTAGG 181 ATCATCTTGT GGGTAGCTAT ACGCATCAGG ACATCTTTGT TTAAAAATCT CGACAAATCA 241 GTAGGGCCAC ATGGACCTTG TGTGCAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGA 301 TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGACATT CACCATTTAT ATTAGCCGTA 361 CAATGAATTG CATGGCATTT CCCTCCACTA GGATTGGTCG GGGCGAAAGT CATTGGAATA 421 TTAAATCCAT CGACTAAAGA AATGTCCCAG AAATCTAGGT TGCTAAACTG GTCCAAGGCG 481 TACTCGGCCA GGGTGTTTGG TGGTTTGCCC CACCCGGTAC ATTGCAAGAC CCCACCACAA 541 TCACCAGTCT GACATGAACC TCTACCAGCA CCATCAAAGT TGCAATTCGT ACGACCCCAT 601 ATACGTGCCA TCTTAGTGCC CCTCGGTGCA TTGATGACCC ATGTTTGGCC TCGATCAAGA 661 CGTCGACCAC CGCCTATTGG GGTCGACGCC GCCCAGACGG TGTATGGACA GTTGTTGCGT 721 ACCTCGAAAG TGGCAGCATA AGTGTAAGTC ACAAAAGCAA GAAGGAAGAA AACAAAAGAA 781 GATCTCA Predicted gene structure (within gDNA segment 12292 to 16007): Exon 1 13713 14417 ( 705 n); cDNA 83 787 ( 705 n); score: 0.897 MATCH C08HBa0235H18.1+ SGN-E340366- 0.897 705 0.896 C PGS_C08HBa0235H18.1+_SGN-E340366- (13713 14417) Alignment (genomic DNA sequence = upper lines): GCATCTCCAA GGGGAAATTT GGATCAGCAA CACCATTAGG ACAAAAGACA ACCC-TATAG 13771 |||||||||| |||||||||| || || || |||||||||| |||||| ||| |||| |||| GCATCTCCAA GGGGAAATTT GGGCTAGTAA CACCATTAGG ACAAAAAACA ACCCNTATAA 142 TTTGTACTAC CACCAGGGCA AGTAAATGTG CTTGTAGGAT CGTCTTGTGG GTAGCTATAA 13831 |||||||||| ||| |||||| |||||||||| || ||||||| | |||||||| ||||||||| TTTGTACTAC CACTAGGGCA AGTAAATGTG CTAGTAGGAT CATCTTGTGG GTAGCTATAC 202 GCATCGGGAC ATCTTTTCTT GAAAAATTTG GACAACTCTG TAGGGCCACA TGGACCTTGG 13891 ||||| |||| ||| ||| || |||||| | ||||| || | |||||||||| ||||||||| GCATCAGGAC ATC-TTTGTT TAAAAATCTC GACAAATCAG TAGGGCCACA TGGACCTTGT 261 GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC 13951 |||||||||| |||||||||| ||| |||||| |||||||| | |||||||||| ||| |||||| GTGCAACAAT ATTGTTGTCC TCCGAACGTG GTACAAGGAT TGTTACATCC TCCGGGTACC 321 TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT 14011 |||| | | ||||||||| |||||||||| || ||||| | |||||||||| || ||||| CTAAGTGAAC CAGGACATTC ACCATTTATA TTAGCCGTAC AATGAATTGC ATGGCATTTC 381 CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 14071 |||||||||| | || || || ||| |||||| |||||||||| |||||||||| |||||||||| CCTCCACTAG GATTGGTCGG GGCGAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 441 ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG 14131 |||||||| | |||||| ||| |||||||||| |||||||||| ||||||| || ||||||||| ATGTCCCAGA AATCTAGGTT GCTAAACTGG TCCAAGGCGT ACTCGGCCAG GGTGTTTGGT 501 GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT 14191 |||||||||| | |||||||| || ||||| |||||||||| |||||||||| ||||| |||| GGTTTGCCCC ACCCGGTACA TTGCAAGACC CCACCACAAT CACCAGTCTG ACATGAACCT 561 CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC 14251 || || ||| ||| |||||| |||| ||| |||||||||| |||||||||| |||||| ||| CTACCAGCAC CATCAAAGTT GCAATTCGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC 621 CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC GCCTATCGGA 14311 ||||| |||| |||||||||| |||||||||| |||| |||| |||||||||| |||||| || CTCGGTGCAT TGATGACCCA TGTTTGGCCT CGATCAAGAC GTCGACCACC GCCTATTGGG 681 GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT GGCAGCATAA 14371 ||||| |||| |||| ||||| |||||||||| |||||||||| |||| | ||| |||||||||| GTCGACGCCG CCCAGACGGT GTATGGACAG TTGTTGCGTA CCTCGAAAGT GGCAGCATAA 741 GTATAAGTCA CACAAAGAAG GAAGAAGAGA ACAAAAGAAG ATGTCA 14417 || ||||||| || || ||| | ||||| | |||||||||| || ||| GTGTAAGTCA CAAAAGCAAG AAGGAAGAAA ACAAAAGAAG ATCTCA 787 hqPGS_C08HBa0235H18.1+_SGN-E340366- (13713 14417) ******************************************************************************** EST sequence 702 -strand 703 n (File: SGN-E213606-) 1 ATTTCCAAGG GGAAATTTGG ATCAGCAACA CCATTAGGAC AAAAGACAAC CCTATAGTTT 61 GTACTACCAC CAGGGCAAGT AAATGTGCTT GTAGGATCGT CTTGTGGGTA GCTATAAGCA 121 TCGGGACATC TTTTCTTGAA AAATTTGGAC AACTCTGTAG GGCCACATGG ACCTTGGGTG 181 CAACAATATT GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA 241 AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 301 CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 361 TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT 421 TTGCCCCATC CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG 481 CCTGCAGCAT TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC 541 GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC 601 GATGCCGCCC AAACGGTGTA TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA 661 TAAGTCACAC AAAGAAGGAA GAAGAGAACA AAAGAAGATG TCA Predicted gene structure (within gDNA segment 13078 to 15017): Exon 1 13715 14417 ( 703 n); cDNA 1 703 ( 703 n); score: 0.999 MATCH C08HBa0235H18.1+ SGN-E213606- 0.999 703 1.000 C PGS_C08HBa0235H18.1+_SGN-E213606- (13715 14417) Alignment (genomic DNA sequence = upper lines): ATCTCCAAGG GGAAATTTGG ATCAGCAACA CCATTAGGAC AAAAGACAAC CCTATAGTTT 13774 || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTCCAAGG GGAAATTTGG ATCAGCAACA CCATTAGGAC AAAAGACAAC CCTATAGTTT 60 GTACTACCAC CAGGGCAAGT AAATGTGCTT GTAGGATCGT CTTGTGGGTA GCTATAAGCA 13834 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTACTACCAC CAGGGCAAGT AAATGTGCTT GTAGGATCGT CTTGTGGGTA GCTATAAGCA 120 TCGGGACATC TTTTCTTGAA AAATTTGGAC AACTCTGTAG GGCCACATGG ACCTTGGGTG 13894 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGGGACATC TTTTCTTGAA AAATTTGGAC AACTCTGTAG GGCCACATGG ACCTTGGGTG 180 CAACAATATT GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA 13954 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACAATATT GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA 240 AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 14014 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 300 CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 14074 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 360 TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT 14134 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT 420 TTGCCCCATC CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG 14194 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCCCCATC CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG 480 CCTGCAGCAT TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC 14254 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTGCAGCAT TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC 540 GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC 14314 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC 600 GATGCCGCCC AAACGGTGTA TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA 14374 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGCCGCCC AAACGGTGTA TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA 660 TAAGTCACAC AAAGAAGGAA GAAGAGAACA AAAGAAGATG TCA 14417 |||||||||| |||||||||| |||||||||| |||||||||| ||| TAAGTCACAC AAAGAAGGAA GAAGAGAACA AAAGAAGATG TCA 703 hqPGS_C08HBa0235H18.1+_SGN-E213606- (13715 14417) ******************************************************************************** EST sequence 571 -strand 652 n (File: SGN-E213536-) 1 CCAAGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG ACAACCNTAT AGTTTGTACT 61 ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG 121 ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA 181 ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC 241 GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT 301 AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA 361 AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC 421 CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC 481 AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC 541 ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC 601 CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT AA Predicted gene structure (within gDNA segment 13074 to 14971): Exon 1 13719 14371 ( 653 n); cDNA 1 652 ( 652 n); score: 0.997 MATCH C08HBa0235H18.1+ SGN-E213536- 0.997 653 1.002 C PGS_C08HBa0235H18.1+_SGN-E213536- (13719 14371) Alignment (genomic DNA sequence = upper lines): CCAAGGGGAA ATTTGGATCA GCAACACCAT TAGGACAAAA GACAACCCTA TAGTTTGTAC 13778 ||||| |||| |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| CCAAG-GGAA ATTTGGATCA GCAACACCAT TAGGACAAAA GACAACCNTA TAGTTTGTAC 59 TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA TAAGCATCGG 13838 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA TAAGCATCGG 119 GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT TGGGTGCAAC 13898 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT TGGGTGCAAC 179 AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACCTTAAGGG 13958 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACCTTAAGGG 239 CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC 14018 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC 299 TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC 14078 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC 359 AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC 14138 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC 419 CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG 14198 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG 479 CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG 14258 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG 539 CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC GGAGTCGATG 14318 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC GGAGTCGATG 599 CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT AGTGGCAGCA TAA 14371 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT AGTGGCAGCA TAA 652 hqPGS_C08HBa0235H18.1+_SGN-E213536- (13719 14371) ******************************************************************************** EST sequence 714 -strand 643 n (File: SGN-E213897-) 1 AAGGGGAAAT TTGAATCAGC AACACCATTA GGACAAAAGA CANCCNTATA GTTTGTACTA 61 CCACCAGGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG 121 ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA 181 ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC 241 GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT 301 AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA 361 AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC 421 CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC 481 AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC 541 ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC 601 CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTG Predicted gene structure (within gDNA segment 12697 to 14962): Exon 1 13721 14362 ( 642 n); cDNA 1 643 ( 643 n); score: 0.991 MATCH C08HBa0235H18.1+ SGN-E213897- 0.991 642 0.998 C PGS_C08HBa0235H18.1+_SGN-E213897- (13721 14362) Alignment (genomic DNA sequence = upper lines): AAGGGGAAAT TTGGATCAGC AACACCATTA GGACAAAAGA CAACCCTATA GTTTGTACTA 13780 |||||||||| ||| |||||| |||||||||| |||||||||| || || |||| |||||||||| AAGGGGAAAT TTGAATCAGC AACACCATTA GGACAAAAGA CANCCNTATA GTTTGTACTA 60 CCACCA-GGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG 13839 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCACCAGGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG 120 ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA 13899 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA 180 ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC 13959 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC 240 GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT 14019 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT 300 AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA 14079 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA 360 AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC 14139 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC 420 CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC 14199 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC 480 AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC 14259 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC 540 ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC 14319 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC 600 CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTG 14362 |||||||||| |||||||||| |||||||||| |||||||||| ||| CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTG 643 hqPGS_C08HBa0235H18.1+_SGN-E213897- (13721 14362) ******************************************************************************** EST sequence 593 -strand 704 n (File: SGN-E212978-) 1 GAAATTTGAT CAGCAACACC ATTAGGACAA AAGACAACCC TATAGTTTGA CTACCACCAG 61 GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT ATAAGCATCG GGACATCTTT 121 TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT 181 GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC 241 ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG 301 TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA 361 AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG 421 TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA 481 AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA 541 CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA 601 CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA 661 GAAGGAAGAA GAGAACAAAA GAAGATGTCA AGTAGCCCAT GTTT Predicted gene structure (within gDNA segment 13054 to 15031): Exon 1 13726 14431 ( 706 n); cDNA 1 704 ( 704 n); score: 0.997 MATCH C08HBa0235H18.1+ SGN-E212978- 0.997 706 1.003 C PGS_C08HBa0235H18.1+_SGN-E212978- (13726 14431) Alignment (genomic DNA sequence = upper lines): GAAATTTGGA TCAGCAACAC CATTAGGACA AAAGACAACC CTATAGTTTG TACTACCACC 13785 ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| GAAATTT-GA TCAGCAACAC CATTAGGACA AAAGACAACC CTATAGTTTG -ACTACCACC 58 AGGGCAAGTA AATGTGCTTG TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT 13845 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGCAAGTA AATGTGCTTG TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT 118 TTTCTTGAAA AATTTGGACA ACTCTGTAGG GCCACATGGA CCTTGGGTGC AACAATATTG 13905 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCTTGAAA AATTTGGACA ACTCTGTAGG GCCACATGGA CCTTGGGTGC AACAATATTG 178 TTGTCCTCCA AACGTGGTAC AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG 13965 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTCCTCCA AACGTGGTAC AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG 238 ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT 14025 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT 298 TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC 14085 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC 358 TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC 14145 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC 418 GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 14205 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 478 AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT 14265 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT 538 GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA 14325 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA 598 AACGGTGTAT GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAAGTAT AAGTCACACA 14385 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACGGTGTAT GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAAGTAT AAGTCACACA 658 AAGAAGGAAG AAGAGAACAA AAGAAGATGT CAAGTAGCCC ATGTTT 14431 |||||||||| |||||||||| |||||||||| |||||||||| |||||| AAGAAGGAAG AAGAGAACAA AAGAAGATGT CAAGTAGCCC ATGTTT 704 hqPGS_C08HBa0235H18.1+_SGN-E212978- (13726 14431) ******************************************************************************** EST sequence 622 -strand 683 n (File: SGN-E212433-) 1 ATCAGCAACA CCATTAGGAC AAAAGACANC CCTATAGTTT GTACTACCAC CAGGGCAAGT 61 AAATGTGCTT GTAGGATCGT CTTGTGGGTA GCTATAAGCA TCGGGACATC TTTTCTTGAA 121 AAATTTGGAC AACTCTGTAG GGCCACATGG ACCTTGGGTG CAACAATATT GTTGTCCTCC 181 AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC 241 ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 301 AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 361 AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 421 TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 481 ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 541 TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA 601 TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA 661 GAAGAGAACA AAAGAAGATG TCA Predicted gene structure (within gDNA segment 13125 to 15017): Exon 1 13735 14417 ( 683 n); cDNA 1 683 ( 683 n); score: 0.999 MATCH C08HBa0235H18.1+ SGN-E212433- 0.999 683 1.000 C PGS_C08HBa0235H18.1+_SGN-E212433- (13735 14417) Alignment (genomic DNA sequence = upper lines): ATCAGCAACA CCATTAGGAC AAAAGACAAC CCTATAGTTT GTACTACCAC CAGGGCAAGT 13794 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| ATCAGCAACA CCATTAGGAC AAAAGACANC CCTATAGTTT GTACTACCAC CAGGGCAAGT 60 AAATGTGCTT GTAGGATCGT CTTGTGGGTA GCTATAAGCA TCGGGACATC TTTTCTTGAA 13854 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATGTGCTT GTAGGATCGT CTTGTGGGTA GCTATAAGCA TCGGGACATC TTTTCTTGAA 120 AAATTTGGAC AACTCTGTAG GGCCACATGG ACCTTGGGTG CAACAATATT GTTGTCCTCC 13914 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATTTGGAC AACTCTGTAG GGCCACATGG ACCTTGGGTG CAACAATATT GTTGTCCTCC 180 AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC 13974 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC 240 ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 14034 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 300 AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 14094 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 360 AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 14154 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 420 TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 14214 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 480 ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 14274 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 540 TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA 14334 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA 600 TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA 14394 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA 660 GAAGAGAACA AAAGAAGATG TCA 14417 |||||||||| |||||||||| ||| GAAGAGAACA AAAGAAGATG TCA 683 hqPGS_C08HBa0235H18.1+_SGN-E212433- (13735 14417) ******************************************************************************** EST sequence 553 -strand 644 n (File: SGN-E305583-) 1 GAGTAGAGCC ATAAGGACAG AACATTATCT TGTAGTCTGT AGTCCAACTC TGACAAGTAA 61 AAGTACTAGT TGGATCGTCT TGAGGGTAAC TATAGGCATC AGGACATCTT TGTTTGAAAA 121 ATCTTGACAA TTCAGTAGGA CCACATGGAC CGTGATTACA ACAATATTGT TGTCCTCCGA 181 ATGTTGTACA AGGGTTGTTA CATCCTCCAG GTACCCTAAG TGAACCAGGG CATTCACCGT 241 TTATATTGGC TGTGCATTGA ATTGGATGAC ATTTTCCAGG GCCAGGCTTA GTTGGGCCAA 301 AAGACATAGG GATGTTGAAT CCATCAATAA CAGAAATATC CCAAAAATCT AGGTTACCAA 361 ACTGGTTCAA AGCGTATTCA GCTAAGGTGT TTGGTGGTTT ACCCCATCCT TTGCAATCCA 421 GGACTCCACC ACAATCACCA GTCTGGCACC AACCTCTTCC AGCACCATCA AAGTTGCAAT 481 TAGTACGACC CCAAATACGT GCCATTTTAG TGCCAGGTGG GGCCCAAAAC CACCAACTCT 541 GACCTCTCTC GAGACGTCGA CCACCTCCTA CGGGGACCGC TGCCGCCCAA ACGGTGTAGG 601 GGCAGTTGTT ATGGACCTCA AATACACCGG AACCATAAGT GTAA Predicted gene structure (within gDNA segment 11705 to 18841): Exon 1 13738 14379 ( 642 n); cDNA 2 640 ( 639 n); score: 0.779 MATCH C08HBa0235H18.1+ SGN-E305583- 0.779 642 0.997 C PGS_C08HBa0235H18.1+_SGN-E305583- (13738 14379) Alignment (genomic DNA sequence = upper lines): AGCAACACCA TTAGGACAAA AGACAACCCT ATAGTTTGTA CTACCACCAG GGCAAGTAAA 13797 || | ||| | |||||| | | | | | | |||| |||| | | || | |||||||| AGTAGAGCCA TAAGGACAGA ACATTATCTT GTAGTCTGTA GTCCAACTCT GACAAGTAAA 61 TGTGCTTGTA GGATCGTCTT GTGGGTAGCT ATAAGCATCG GGACATCTTT TCTTGAAAAA 13857 || || || |||||||||| | ||||| || ||| ||||| |||||||||| |||||||| AGTACTAGTT GGATCGTCTT GAGGGTAACT ATAGGCATCA GGACATCTTT GTTTGAAAAA 121 TTTGGACAAC TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT GTCCTCCAAA 13917 | | ||||| || ||||| | |||||||||| || | ||| |||||||||| ||||||| || TCTTGACAAT TCAGTAGGAC CACATGGACC GTGATTACAA CAATATTGTT GTCCTCCGAA 181 CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT 13977 || |||||| |||||||||| |||||||||| |||| |||| | | ||| | ||||||| || TGTTGTACAA GGGTTGTTAC ATCCTCCAGG TACCCTAAGT GAACCAGGGC ATTCACCGTT 241 TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA 14037 ||||||||| ||||| |||| ||| ||||| |||||| | ||| || | ||||| |||| TATATTGGCT GTGCATTGAA TTGGATGACA TTTTCCAGGG CCAGGCTTAG TTGGGCCAAA 301 AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA 14097 || ||| || || || |||| |||| | | |||||| ||| |||||||||| ||| | ||| AGACATAGGG ATGTTGAATC CATCAATAAC AGAAATATCC CAAAAATCTA GGTTACCAAA 361 CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA 14157 ||||| ||| ||||| || | ||| |||||| ||| ||||| |||||||| | || | | CTGGTTCAAA GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT TGCAATCCAG 421 GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC 14217 |||||||||| |||||||||| |||| || |||||| || ||| ||| || |||||||| GACTCCACCA CAATCACCAG TCTGGCACCA ACCTCTTCCA GCACCATCAA AGTTGCAATT 481 AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG 14277 |||||||||| || ||||||| |||| ||||| || || || | ||| | || AGTACGACCC CAAATACGTG CCATTTTAGT GCCAGGTGGG GCCCAAAACC ACCAACTCTG 541 GCCTCGATTG AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG 14337 |||| | | |||||||||| |||| |||| || || | |||||||||| ||||||| || ACCTCTCTCG AGACGTCGAC CACCTCCTAC GGGGACCGCT GCCGCCCAAA CGGTGTAGGG 601 ACAGTTGTTG CGTACCTCAA TAGTGGCAGC ATAAGTATAA GT 14379 |||||||| | ||||||| | | || | || |||| || GCAGTTGTTA TGGACCTCAA -A-T-ACACC GGAACCATAA GT 640 hqPGS_C08HBa0235H18.1+_SGN-E305583- (13738 14379) ******************************************************************************** EST sequence 960 -strand 550 n (File: SGN-E256630-) 1 ATTAGGACAA AAGACAACCC TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT 61 AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA 121 CTCTGTAGGG CCACATGGAC TTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA 181 AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC 241 CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG 301 AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA 361 GGCGTACTCG GATAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC 421 ACAATCACCA GTCTGACATG TACCTCTGCT TGCAGCATTA AAGTTGCAAC CAGTACGACC 481 CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG ACCCATGTTT GGCTTCGATT 541 GAGACGTCGC Predicted gene structure (within gDNA segment 13137 to 15049): Exon 1 13747 14295 ( 549 n); cDNA 1 549 ( 549 n); score: 0.993 MATCH C08HBa0235H18.1+ SGN-E256630- 0.993 549 0.998 C PGS_C08HBa0235H18.1+_SGN-E256630- (13747 14295) Alignment (genomic DNA sequence = upper lines): ATTAGGACAA AAGACAACCC TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT 13806 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAGGACAA AAGACAACCC TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT 60 AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA 13866 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA 120 CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA 13926 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| CTCTGTAGGG CCACATGGAC TTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA 180 AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC 13986 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC 240 CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG 14046 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG 300 AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA 14106 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA 360 GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC 14166 |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCGTACTCG GATAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC 420 ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC 14226 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| ACAATCACCA GTCTGACATG TACCTCTGCT TGCAGCATTA AAGTTGCAAC CAGTACGACC 480 CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG ACCCATGTTT GGCCTCGATT 14286 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG ACCCATGTTT GGCTTCGATT 540 GAGACGTCG 14295 ||||||||| GAGACGTCG 549 hqPGS_C08HBa0235H18.1+_SGN-E256630- (13747 14295) ******************************************************************************** EST sequence 656 -strand 511 n (File: SGN-E204787-) 1 TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 61 TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 121 CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 181 GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 241 ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 301 AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT 361 TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG 421 TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG 481 TTCCCCTCGG AGCATTGATG ACCCATGTTT G Predicted gene structure (within gDNA segment 13157 to 14877): Exon 1 13767 14277 ( 511 n); cDNA 1 511 ( 511 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E204787- 1.000 511 1.000 C PGS_C08HBa0235H18.1+_SGN-E204787- (13767 14277) Alignment (genomic DNA sequence = upper lines): TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 13826 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 60 TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 13886 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 120 CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 13946 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 180 GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 14006 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 240 ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 14066 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 300 AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT 14126 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT 360 TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG 14186 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG 420 TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG 14246 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG 480 TTCCCCTCGG AGCATTGATG ACCCATGTTT G 14277 |||||||||| |||||||||| |||||||||| | TTCCCCTCGG AGCATTGATG ACCCATGTTT G 511 hqPGS_C08HBa0235H18.1+_SGN-E204787- (13767 14277) ******************************************************************************** EST sequence 879 -strand 499 n (File: SGN-E200099-) 1 TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 61 TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 121 CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 181 GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 241 ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 301 AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT 361 TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG 421 TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG 481 TTCCCCTCGG AGCATTGAT Predicted gene structure (within gDNA segment 13157 to 14865): Exon 1 13767 14265 ( 499 n); cDNA 1 499 ( 499 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E200099- 1.000 499 1.000 C PGS_C08HBa0235H18.1+_SGN-E200099- (13767 14265) Alignment (genomic DNA sequence = upper lines): TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 13826 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 60 TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 13886 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 120 CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 13946 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 180 GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 14006 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 240 ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 14066 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 300 AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT 14126 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT 360 TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG 14186 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG 420 TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG 14246 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG 480 TTCCCCTCGG AGCATTGAT 14265 |||||||||| ||||||||| TTCCCCTCGG AGCATTGAT 499 hqPGS_C08HBa0235H18.1+_SGN-E200099- (13767 14265) ******************************************************************************** EST sequence 1164 -strand 415 n (File: SGN-E275197-) 1 TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 61 TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 121 CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 181 GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 241 ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 301 AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT 361 TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA GTCTG Predicted gene structure (within gDNA segment 13157 to 14781): Exon 1 13767 14181 ( 415 n); cDNA 1 415 ( 415 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E275197- 1.000 415 1.000 C PGS_C08HBa0235H18.1+_SGN-E275197- (13767 14181) Alignment (genomic DNA sequence = upper lines): TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 13826 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 60 TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 13886 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 120 CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 13946 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 180 GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 14006 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 240 ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 14066 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 300 AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT 14126 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT 360 TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA GTCTG 14181 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA GTCTG 415 hqPGS_C08HBa0235H18.1+_SGN-E275197- (13767 14181) ******************************************************************************** EST sequence 679 -strand 597 n (File: SGN-E253886-) 1 ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT 61 ATAAGCATCG GGACATCTTT TCTTGAAGAA TTTGCACAAC TCTGTAGGGC CACATGGACC 121 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 181 TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 241 TTTTCCTCCA TTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 301 AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 361 TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT 421 ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATATTAGT 481 TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT 541 CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGC Predicted gene structure (within gDNA segment 13158 to 14964): Exon 1 13768 14364 ( 597 n); cDNA 1 597 ( 597 n); score: 0.993 MATCH C08HBa0235H18.1+ SGN-E253886- 0.993 597 1.000 C PGS_C08HBa0235H18.1+_SGN-E253886- (13768 14364) Alignment (genomic DNA sequence = upper lines): ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT 13827 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT 60 ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 13887 |||||||||| |||||||||| ||||||| || |||| ||||| |||||||||| |||||||||| ATAAGCATCG GGACATCTTT TCTTGAAGAA TTTGCACAAC TCTGTAGGGC CACATGGACC 120 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 13947 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 180 TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 14007 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 240 TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 14067 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTCCTCCA TTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 300 AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 14127 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 360 TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT 14187 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT 420 ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT 14247 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATATTAGT 480 TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT 14307 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT 540 CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGC 14364 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGC 597 hqPGS_C08HBa0235H18.1+_SGN-E253886- (13768 14364) ******************************************************************************** EST sequence 795 -strand 415 n (File: SGN-E206043-) 1 ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT 61 ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 121 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 181 TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 241 TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ACCAAGNAAN TATTAAATCC 301 ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 361 TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCA Predicted gene structure (within gDNA segment 13158 to 14773): Exon 1 13768 14173 ( 406 n); cDNA 1 415 ( 415 n); score: 0.945 MATCH C08HBa0235H18.1+ SGN-E206043- 0.945 406 0.978 C PGS_C08HBa0235H18.1+_SGN-E206043- (13768 14173) Alignment (genomic DNA sequence = upper lines): ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT 13827 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT 60 ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 13887 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 120 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 13947 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 180 TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 14007 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 240 TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATT-G- -----G-AA- TATTAAATCC 14058 |||||||||| |||||||||| |||||||||| ||||||| | | || |||||||||| TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ACCAAGNAAN TATTAAATCC 300 ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 14118 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 360 TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCA 14173 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCA 415 hqPGS_C08HBa0235H18.1+_SGN-E206043- (13768 14173) ******************************************************************************** EST sequence 997 -strand 327 n (File: SGN-E207626-) 1 ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT 61 ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 121 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 181 TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 241 TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 301 AGAAATGTCC CAAAAATCTA AGTTGCT Predicted gene structure (within gDNA segment 13158 to 14694): Exon 1 13768 14094 ( 327 n); cDNA 1 327 ( 327 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E207626- 1.000 327 1.000 C PGS_C08HBa0235H18.1+_SGN-E207626- (13768 14094) Alignment (genomic DNA sequence = upper lines): ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT 13827 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT 60 ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 13887 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 120 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 13947 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 180 TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 14007 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 240 TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 14067 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 300 AGAAATGTCC CAAAAATCTA AGTTGCT 14094 |||||||||| |||||||||| ||||||| AGAAATGTCC CAAAAATCTA AGTTGCT 327 hqPGS_C08HBa0235H18.1+_SGN-E207626- (13768 14094) ******************************************************************************** EST sequence 597 -strand 598 n (File: SGN-E253452-) 1 TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA 61 TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT 121 TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 181 ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 241 TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 301 GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 361 GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 421 CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 481 CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 541 GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT AGTGGCAG Predicted gene structure (within gDNA segment 13159 to 14966): Exon 1 13769 14366 ( 598 n); cDNA 1 598 ( 598 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E253452- 1.000 598 1.000 C PGS_C08HBa0235H18.1+_SGN-E253452- (13769 14366) Alignment (genomic DNA sequence = upper lines): TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA 13828 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA 60 TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT 13888 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT 120 TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 13948 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 180 ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 14008 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 240 TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 14068 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 300 GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 14128 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 360 GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 14188 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 420 CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 14248 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 480 CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 14308 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 540 GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT AGTGGCAG 14366 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT AGTGGCAG 598 hqPGS_C08HBa0235H18.1+_SGN-E253452- (13769 14366) ******************************************************************************** EST sequence 968 -strand 645 n (File: SGN-E276677-) 1 AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT 61 AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 121 GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 181 CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 241 TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 301 AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 361 GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 421 CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 481 CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 541 GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT 601 AAGTATAAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA AGATG Predicted gene structure (within gDNA segment 13160 to 15014): Exon 1 13770 14414 ( 645 n); cDNA 1 645 ( 645 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E276677- 1.000 645 1.000 C PGS_C08HBa0235H18.1+_SGN-E276677- (13770 14414) Alignment (genomic DNA sequence = upper lines): AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT 13829 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT 60 AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 13889 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 120 GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 13949 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 180 CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 14009 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 240 TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 14069 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 300 AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 14129 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 360 GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 14189 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 420 CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 14249 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 480 CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 14309 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 540 GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT 14369 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT 600 AAGTATAAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA AGATG 14414 |||||||||| |||||||||| |||||||||| |||||||||| ||||| AAGTATAAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA AGATG 645 hqPGS_C08HBa0235H18.1+_SGN-E276677- (13770 14414) ******************************************************************************** EST sequence 1128 -strand 645 n (File: SGN-E209968-) 1 AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT 61 AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 121 GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 181 CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 241 TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 301 AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 361 GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 421 CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 481 CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 541 GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT 601 AAGTATAAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA AGATG Predicted gene structure (within gDNA segment 13160 to 15014): Exon 1 13770 14414 ( 645 n); cDNA 1 645 ( 645 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E209968- 1.000 645 1.000 C PGS_C08HBa0235H18.1+_SGN-E209968- (13770 14414) Alignment (genomic DNA sequence = upper lines): AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT 13829 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT 60 AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 13889 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 120 GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 13949 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 180 CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 14009 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 240 TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 14069 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 300 AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 14129 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 360 GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 14189 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 420 CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 14249 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 480 CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 14309 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 540 GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT 14369 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT 600 AAGTATAAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA AGATG 14414 |||||||||| |||||||||| |||||||||| |||||||||| ||||| AAGTATAAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA AGATG 645 hqPGS_C08HBa0235H18.1+_SGN-E209968- (13770 14414) ******************************************************************************** EST sequence 670 -strand 595 n (File: SGN-E254383-) 1 AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT 61 AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 121 GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 181 CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 241 TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 301 AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 361 GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 421 CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 481 CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 541 GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGC Predicted gene structure (within gDNA segment 13160 to 14964): Exon 1 13770 14364 ( 595 n); cDNA 1 595 ( 595 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E254383- 1.000 595 1.000 C PGS_C08HBa0235H18.1+_SGN-E254383- (13770 14364) Alignment (genomic DNA sequence = upper lines): AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT 13829 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT 60 AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 13889 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 120 GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 13949 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 180 CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 14009 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 240 TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 14069 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 300 AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 14129 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 360 GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 14189 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 420 CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 14249 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 480 CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 14309 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 540 GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGC 14364 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGC 595 hqPGS_C08HBa0235H18.1+_SGN-E254383- (13770 14364) ******************************************************************************** EST sequence 634 -strand 602 n (File: SGN-E303865-) 1 ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC 61 GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA 121 ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GNTACCTTAA 181 GGGCGCGAGG ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC 241 CACTAGGTTT TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT 301 CCCAAAAATC TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT 361 TGCCCCATCC GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC 421 CTGCAGCATT AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG 481 GAGCATTGAT GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG 541 ATGCCGCCCA AACGGTGTAT GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAAGTAT 601 AA Predicted gene structure (within gDNA segment 13167 to 14977): Exon 1 13777 14377 ( 601 n); cDNA 1 602 ( 602 n); score: 0.996 MATCH C08HBa0235H18.1+ SGN-E303865- 0.996 601 0.998 C PGS_C08HBa0235H18.1+_SGN-E303865- (13777 14377) Alignment (genomic DNA sequence = upper lines): ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC 13836 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC 60 GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA 13896 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA 120 ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG G-TACCTTAA 13955 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GNTACCTTAA 180 GGGCGCGAGG ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC 14015 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGCGCGAGG ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC 240 CACTAGGTTT TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT 14075 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACTAGGTTT TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT 300 CCCAAAAATC TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT 14135 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCAAAAATC TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT 360 TGCCCCATCC GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC 14195 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCCCCATCC GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC 420 CTGCAGCATT AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG 14255 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGCAGCATT AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG 480 GAGCATTGAT GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG 14315 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGCATTGAT GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG 540 ATGCCGCCCA AACGGTGTAT GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAAGTAT 14375 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGCCGCCCA AACGGTGTAT GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAAGTAT 600 AA 14377 || AA 602 hqPGS_C08HBa0235H18.1+_SGN-E303865- (13777 14377) ******************************************************************************** EST sequence 1185 -strand 581 n (File: SGN-E301650-) 1 GTCCAACTCT GACAAGTAAA AGTACTAGTT GGATCGTCTT GAGGGTAACT ATAGGCATCA 61 GGACATCTTT GTTTGAAAAA TCTTGACAAT TCAGTAGGAC CACATGGACC GTGATTACAA 121 CAATATTGTT GTCCTCCGAA TGTTGTACAA GGGTTGTTAC ATCCTCCAGG TACCCTAAGT 181 GAACCAGGGC ATTCACCGTT TATATTGGCT GTGCATTGAA TTGGATGACA TTTTCCAGGG 241 CCAGGCTTAG TTGGGCCAAA AGACATAGGG ATGTTGAATC CATCAATAAC AGAAATATCC 301 CAAAAATCTA GGTTACCAAA CTGGTTCAAA GCGTATTCAG CTAAGGTGTT TGGTGGTTTA 361 CCCCATCCTT TGCAATCCAG GACTCCACCA CAATCACCAG TCTGGCACCA ACCTCTTCCA 421 GCACCATCAA AGTTGCAATT AGTACGACCC CAAATACGTG CCATTTTAGT GCCAGGTGGG 481 GCCCAAAACC ACCAACTCTG ACCTCTCTCG AGACGTCGAC CACCTCCTAC GCGGACCGCT 541 GCCGCCCAAA CGGTGTAGGG GCAGTTGTTA TGGACCTCAA A Predicted gene structure (within gDNA segment 12115 to 18621): Exon 1 13783 14357 ( 575 n); cDNA 6 580 ( 575 n); score: 0.795 MATCH C08HBa0235H18.1+ SGN-E301650- 0.795 575 0.990 C PGS_C08HBa0235H18.1+_SGN-E301650- (13783 14357) Alignment (genomic DNA sequence = upper lines): ACCAGGGCAA GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA 13842 || | ||| ||||| || | | || ||||| |||||| ||| || ||||| | |||| ||||| ACTCTGACAA GTAAAAGTAC TAGTTGGATC GTCTTGAGGG TAACTATAGG CATCAGGACA 65 TCTTTTCTTG AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA 13902 ||||| ||| |||||| | | |||| || || ||| |||||| ||||| || | |||||||| TCTTTGTTTG AAAAATCTTG ACAATTCAGT AGGACCACAT GGACCGTGAT TACAACAATA 125 TTGTTGTCCT CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG 13962 |||||||||| || || || | |||||||||| |||||||||| ||||||||| |||| | | TTGTTGTCCT CCGAATGTTG TACAAGGGTT GTTACATCCT CCAGGTACCC TAAGTGAACC 185 AGGACATTCA CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG 14022 ||| |||||| || ||||||| |||| ||||| ||||||| |||||||||| | | ||| AGGGCATTCA CCGTTTATAT TGGCTGTGCA TTGAATTGGA TGACATTTTC CAGGGCCAGG 245 TTTTGTTGGG GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA 14082 || |||||| |||||| || | || || || |||||||| | | ||||| | |||||||| CTTAGTTGGG CCAAAAGACA TAGGGATGTT GAATCCATCA ATAACAGAAA TATCCCAAAA 305 ATCTAAGTTG CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA 14142 ||||| ||| | |||||||| ||| ||||| || |||| | |||||||| | |||| ||||| ATCTAGGTTA CCAAACTGGT TCAAAGCGTA TTCAGCTAAG GTGTTTGGTG GTTTACCCCA 365 TCCGGTACAC TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC 14202 ||| | || | | ||||| |||||||||| ||||||||| || ||||| | || ||| | TCCTTTGCAA TCCAGGACTC CACCACAATC ACCAGTCTGG CACCAACCTC TTCCAGCACC 425 ATTAAAGTTG CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC TCGGAGCATT 14262 || ||||||| ||| ||||| ||||||| || ||||||||| ||||| || || || ATCAAAGTTG CAATTAGTAC GACCCCAAAT ACGTGCCATT TTAGTGCCAG GTGGGGCCCA 485 GATGACCCAT GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG TCGATGCCGC 14322 | ||| | || |||| | |||||| ||||||||| |||| | || |||||| AAACCACCAA CTCTGACCTC TCTCGAGACG TCGACCACCT CCTACGCGGA CCGCTGCCGC 545 CCAAACGGTG TATGGACAGT TGTTGCGTAC CTCAA 14357 |||||||||| || || |||| |||| | || ||||| CCAAACGGTG TAGGGGCAGT TGTTATGGAC CTCAA 580 hqPGS_C08HBa0235H18.1+_SGN-E301650- (13783 14357) ******************************************************************************** EST sequence 1222 -strand 646 n (File: SGN-E294134-) 1 AGGGCAAGTA AATGTGCTAG TAGGATCATC TTGTGGGTAG CTATACGCAT CAGGACATCT 61 TTGTTTGAAA AATCTCGCCA AATCAGTAGG GCCACATGGA CCTTGTGTGC AACAATATTG 121 TTGTCCTCCG AACGTGGTAC AAGGATTGTT ACATCCTCCG GGTACCCTAA GTGAACCAGG 181 ACATTCACCA TTTATATTAG CCGTACAATG AATTGCATGG CATTTCCCTC CACTAGGATT 241 GGTCGGGGCG AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC 301 TAGGTTGCTA AACTGGTCCA AGGCGTACTC GGCCAGGGTG TTTGGTGGTT TGCCCCACCC 361 GGTACATTGC AAGACCCCAC CACAATCACC AGTCTGACAT GAACCTCTAC CAGCACCATC 421 AAAGTTGCAA TTCGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GTGCATTGAT 481 GACCCATGTT TGGCCTCGAT CAAGACGTCG ACCACCGCCT ATTGGGGTCG ACGCCGCCCA 541 GACGGTGTAT GGACAGTTGT TGCGTACCTC GAAAGTGGCA GCATAAGTGT AAGTCACAAA 601 AGCAAGAAGG AAGAAAACAA AAGAAGATCT CAAGTAGGCC ATGTTT Predicted gene structure (within gDNA segment 13176 to 16147): Exon 1 13786 14431 ( 646 n); cDNA 1 646 ( 646 n); score: 0.901 MATCH C08HBa0235H18.1+ SGN-E294134- 0.901 646 1.000 C PGS_C08HBa0235H18.1+_SGN-E294134- (13786 14431) Alignment (genomic DNA sequence = upper lines): AGGGCAAGTA AATGTGCTTG TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT 13845 |||||||||| |||||||| | ||||||| || |||||||||| ||||| |||| | |||||||| AGGGCAAGTA AATGTGCTAG TAGGATCATC TTGTGGGTAG CTATACGCAT CAGGACATCT 60 TTTCTTGAAA AATTTGGACA ACTCTGTAGG GCCACATGGA CCTTGGGTGC AACAATATTG 13905 || |||||| ||| | | || | || ||||| |||||||||| ||||| |||| |||||||||| TTGTTTGAAA AATCTCGCCA AATCAGTAGG GCCACATGGA CCTTGTGTGC AACAATATTG 120 TTGTCCTCCA AACGTGGTAC AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG 13965 ||||||||| |||||||||| |||| ||||| ||||||||| |||||| ||| | | | ||| TTGTCCTCCG AACGTGGTAC AAGGATTGTT ACATCCTCCG GGTACCCTAA GTGAACCAGG 180 ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT 14025 |||||||||| |||||||| | |||| ||||| |||||| || ||||| |||| ||||||| || ACATTCACCA TTTATATTAG CCGTACAATG AATTGCATGG CATTTCCCTC CACTAGGATT 240 TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC 14085 || ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| GGTCGGGGCG AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC 300 TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC 14145 || ||||||| |||||||||| |||||||||| ||| |||||| ||||| |||| ||||||| || TAGGTTGCTA AACTGGTCCA AGGCGTACTC GGCCAGGGTG TTTGGTGGTT TGCCCCACCC 360 GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 14205 |||||| || ||||| |||| |||||||||| |||||||||| | |||||| | | ||| ||| GGTACATTGC AAGACCCCAC CACAATCACC AGTCTGACAT GAACCTCTAC CAGCACCATC 420 AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT 14265 |||||||||| ||||||| |||||||||| |||||||||| || ||||||| | |||||||| AAAGTTGCAA TTCGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GTGCATTGAT 480 GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA 14325 |||||||||| |||||||||| |||||||| |||||||||| || || |||| | |||||||| GACCCATGTT TGGCCTCGAT CAAGACGTCG ACCACCGCCT ATTGGGGTCG ACGCCGCCCA 540 AACGGTGTAT GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAAGTAT AAGTCACACA 14385 ||||||||| |||||||||| |||||||||| | ||||||| |||||||| | |||||||| | GACGGTGTAT GGACAGTTGT TGCGTACCTC GAAAGTGGCA GCATAAGTGT AAGTCACAAA 600 AAGAAGGAAG AAGAGAACAA AAGAAGATGT CAAGTAGCCC ATGTTT 14431 | ||| | | |||| ||||| |||||||| | ||||||| || |||||| AGCAAGAAGG AAGAAAACAA AAGAAGATCT CAAGTAGGCC ATGTTT 646 hqPGS_C08HBa0235H18.1+_SGN-E294134- (13786 14431) ******************************************************************************** EST sequence 587 -strand 632 n (File: SGN-E302616-) 1 AGGGCAAGTA AATGTGCTAG TAGGATCATC CTGTGGGTAG CTATACGCAT CAGGACATCT 61 CTGTTTGCAC AATCCCGACA AATCAGTAGG GCCACATGGA CCTTGTGTGC AACAATATTG 121 TTGTCCTCCG AACGTGGTAC AAGGATTGTT ACATCCTCCG GGTACCCTAA GTGAACCAGG 181 ACATTCACCA TTTATATTAG CCGTACAATG AATTGCATGG CATTTCCCTC CACTAGGATT 241 GGTCGGGGCG AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC 301 TAGGTTGCTA AACTGGTCCA AGGCGTACTC GGCCAGGGTG TTTGGTGGTT TGCCCCACCC 361 GGTACATTGC AAGACCCCAC CACAATCACC AGTCTGACAT GAACCTCTAC CAGCACCATC 421 AAAGTTGCAA TTCGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GTGCATTGAT 481 GACCCATGTT TGGCCTCGAT CAAGACGTCG ACCACCGCCT ATTGGGGTCG ACGCCGCCCA 541 GACGGTGTAT GGACAGTTGT TGCGTACCTC GAAAGTGGCA GCATAAGTGT AAGTCACAAA 601 AGCAAGAAGG AAGAAAACAA AAGAAGATCT CA Predicted gene structure (within gDNA segment 12411 to 16007): Exon 1 13786 14417 ( 632 n); cDNA 1 632 ( 632 n); score: 0.894 MATCH C08HBa0235H18.1+ SGN-E302616- 0.894 632 1.000 C PGS_C08HBa0235H18.1+_SGN-E302616- (13786 14417) Alignment (genomic DNA sequence = upper lines): AGGGCAAGTA AATGTGCTTG TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT 13845 |||||||||| |||||||| | ||||||| || ||||||||| ||||| |||| | |||||||| AGGGCAAGTA AATGTGCTAG TAGGATCATC CTGTGGGTAG CTATACGCAT CAGGACATCT 60 TTTCTTGAAA AATTTGGACA ACTCTGTAGG GCCACATGGA CCTTGGGTGC AACAATATTG 13905 | ||| | ||| |||| | || ||||| |||||||||| ||||| |||| |||||||||| CTGTTTGCAC AATCCCGACA AATCAGTAGG GCCACATGGA CCTTGTGTGC AACAATATTG 120 TTGTCCTCCA AACGTGGTAC AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG 13965 ||||||||| |||||||||| |||| ||||| ||||||||| |||||| ||| | | | ||| TTGTCCTCCG AACGTGGTAC AAGGATTGTT ACATCCTCCG GGTACCCTAA GTGAACCAGG 180 ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT 14025 |||||||||| |||||||| | |||| ||||| |||||| || ||||| |||| ||||||| || ACATTCACCA TTTATATTAG CCGTACAATG AATTGCATGG CATTTCCCTC CACTAGGATT 240 TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC 14085 || ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| GGTCGGGGCG AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC 300 TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC 14145 || ||||||| |||||||||| |||||||||| ||| |||||| ||||| |||| ||||||| || TAGGTTGCTA AACTGGTCCA AGGCGTACTC GGCCAGGGTG TTTGGTGGTT TGCCCCACCC 360 GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 14205 |||||| || ||||| |||| |||||||||| |||||||||| | |||||| | | ||| ||| GGTACATTGC AAGACCCCAC CACAATCACC AGTCTGACAT GAACCTCTAC CAGCACCATC 420 AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT 14265 |||||||||| ||||||| |||||||||| |||||||||| || ||||||| | |||||||| AAAGTTGCAA TTCGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GTGCATTGAT 480 GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA 14325 |||||||||| |||||||||| |||||||| |||||||||| || || |||| | |||||||| GACCCATGTT TGGCCTCGAT CAAGACGTCG ACCACCGCCT ATTGGGGTCG ACGCCGCCCA 540 AACGGTGTAT GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAAGTAT AAGTCACACA 14385 ||||||||| |||||||||| |||||||||| | ||||||| |||||||| | |||||||| | GACGGTGTAT GGACAGTTGT TGCGTACCTC GAAAGTGGCA GCATAAGTGT AAGTCACAAA 600 AAGAAGGAAG AAGAGAACAA AAGAAGATGT CA 14417 | ||| | | |||| ||||| |||||||| | || AGCAAGAAGG AAGAAAACAA AAGAAGATCT CA 632 hqPGS_C08HBa0235H18.1+_SGN-E302616- (13786 14417) ******************************************************************************** EST sequence 798 -strand 632 n (File: SGN-E251623-) 1 AGGGCAAGTA AATGTGCTTG TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT 61 TTTCTTGAAA AATTTGGACA ACTCTGTAGG GCCACATGGA CCTTGGGTGC AACAATATTG 121 TTGTCCTCCA AACGTGGTAC AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG 181 ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT 241 TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC 301 TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC 361 GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 421 AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT 481 GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA 541 AACGGTGTAT GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAAGTAT AAGTCACACA 601 AAGAAGGAAG AAGAGACCAA AAGAAGATGT CA Predicted gene structure (within gDNA segment 13176 to 15179): Exon 1 13786 14417 ( 632 n); cDNA 1 632 ( 632 n); score: 0.998 MATCH C08HBa0235H18.1+ SGN-E251623- 0.998 632 1.000 C PGS_C08HBa0235H18.1+_SGN-E251623- (13786 14417) Alignment (genomic DNA sequence = upper lines): AGGGCAAGTA AATGTGCTTG TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT 13845 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGCAAGTA AATGTGCTTG TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT 60 TTTCTTGAAA AATTTGGACA ACTCTGTAGG GCCACATGGA CCTTGGGTGC AACAATATTG 13905 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCTTGAAA AATTTGGACA ACTCTGTAGG GCCACATGGA CCTTGGGTGC AACAATATTG 120 TTGTCCTCCA AACGTGGTAC AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG 13965 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTCCTCCA AACGTGGTAC AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG 180 ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT 14025 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT 240 TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC 14085 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC 300 TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC 14145 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC 360 GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 14205 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 420 AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT 14265 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT 480 GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA 14325 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA 540 AACGGTGTAT GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAAGTAT AAGTCACACA 14385 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACGGTGTAT GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAAGTAT AAGTCACACA 600 AAGAAGGAAG AAGAGAACAA AAGAAGATGT CA 14417 |||||||||| |||||| ||| |||||||||| || AAGAAGGAAG AAGAGACCAA AAGAAGATGT CA 632 hqPGS_C08HBa0235H18.1+_SGN-E251623- (13786 14417) ******************************************************************************** EST sequence 973 -strand 611 n (File: SGN-E256710-) 1 AGGGCAAGTA AATGTGCTTG TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT 61 TTTCTTGAAA AATTTGGACA ACTCTGTAGG GCCACATGGA CCTTGGGTGC AACAATATTG 121 TTGTCCTCCA AACGTGGTAC AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG 181 ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT 241 TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC 301 TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC 361 GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 421 AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT 481 GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA 541 AACGGTGTAT GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAAGTAT AAGTCACACA 601 AAGAAGGAAG A Predicted gene structure (within gDNA segment 13176 to 14996): Exon 1 13786 14396 ( 611 n); cDNA 1 611 ( 611 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E256710- 1.000 611 1.000 C PGS_C08HBa0235H18.1+_SGN-E256710- (13786 14396) Alignment (genomic DNA sequence = upper lines): AGGGCAAGTA AATGTGCTTG TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT 13845 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGCAAGTA AATGTGCTTG TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT 60 TTTCTTGAAA AATTTGGACA ACTCTGTAGG GCCACATGGA CCTTGGGTGC AACAATATTG 13905 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCTTGAAA AATTTGGACA ACTCTGTAGG GCCACATGGA CCTTGGGTGC AACAATATTG 120 TTGTCCTCCA AACGTGGTAC AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG 13965 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTCCTCCA AACGTGGTAC AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG 180 ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT 14025 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT 240 TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC 14085 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC 300 TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC 14145 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC 360 GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 14205 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 420 AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT 14265 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT 480 GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA 14325 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA 540 AACGGTGTAT GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAAGTAT AAGTCACACA 14385 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACGGTGTAT GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAAGTAT AAGTCACACA 600 AAGAAGGAAG A 14396 |||||||||| | AAGAAGGAAG A 611 hqPGS_C08HBa0235H18.1+_SGN-E256710- (13786 14396) ******************************************************************************** EST sequence 749 -strand 659 n (File: SGN-E214263-) 1 AGGGGCAAGT AAATGTGCTA GTAGGATCAT CTTGTGGGTA GCTATACGCA TCAGGACATC 61 TTTGTTTGAA AATCTCGACA AATCAGTAGG GCCACATGGA CCTTGTGTGC AACAATATTG 121 TTGTCCTCCG AACGTGGTAC AAGGATTGTT ACATCCTCCG GGTACCNTAA GTGAACCAGG 181 ACATTCACCA TTTATATTAG CCGTACAATG AATTGCATGG CATTTCCCTC CACTAGGATT 241 GGTCGGGGCG AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC 301 TAGGTTGCTA AACTGGTCCA AGGCGTACTC GGCCAGGGTG TTTGGTGGTT TGCCCCACCC 361 GGTACATTGC AAGACCCCAC CACAATCACC AGTCTGACAT GAACCTCTAC CAGCACCATC 421 AAAGTTGCAA TTCGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GTGCATTGAT 481 GACCCATGTT TGGCCTCGAT CAAGACGTCG ACCACCGCCT ATTGGGGTCG ACGCCGCCCA 541 GACGGTGTAT GGACAGTTGT TGCGTACCTC GAAAGTGGCA GCATAAGTGT AAGTCACAAA 601 AGCAAGAAGG AAGAAAACAA AAGAAGATCT CAAGTAGGCC ATGTTTGTGG AACTATTTT Predicted gene structure (within gDNA segment 13157 to 16277): Exon 1 13787 14437 ( 651 n); cDNA 3 652 ( 650 n); score: 0.900 MATCH C08HBa0235H18.1+ SGN-E214263- 0.900 651 0.988 C PGS_C08HBa0235H18.1+_SGN-E214263- (13787 14437) Alignment (genomic DNA sequence = upper lines): GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 13846 |||||||||| ||||||| || |||||| ||| |||||||||| |||| ||||| ||||||||| GGGCAAGTAA ATGTGCTAGT AGGATCATCT TGTGGGTAGC TATACGCATC AGGACATCTT 62 TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 13906 | ||| ||| || | ||||| || |||||| |||||||||| |||| ||||| |||||||||| TGTTTG-AAA ATCTCGACAA ATCAGTAGGG CCACATGGAC CTTGTGTGCA ACAATATTGT 121 TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 13966 |||||||| | |||||||||| ||| |||||| |||||||| | ||||| |||| | | |||| TGTCCTCCGA ACGTGGTACA AGGATTGTTA CATCCTCCGG GTACCNTAAG TGAACCAGGA 181 CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 14026 |||||||||| ||||||| || ||| |||||| ||||| || | |||| ||||| |||||| || CATTCACCAT TTATATTAGC CGTACAATGA ATTGCATGGC ATTTCCCTCC ACTAGGATTG 241 GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 14086 || ||||| | |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| GTCGGGGCGA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAGAAATCT 301 AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 14146 | |||||||| |||||||||| |||||||||| || ||||||| |||| ||||| |||||| ||| AGGTTGCTAA ACTGGTCCAA GGCGTACTCG GCCAGGGTGT TTGGTGGTTT GCCCCACCCG 361 GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 14206 ||||| || | |||| ||||| |||||||||| |||||||||| |||||| || ||| ||| | GTACATTGCA AGACCCCACC ACAATCACCA GTCTGACATG AACCTCTACC AGCACCATCA 421 AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 14266 ||||||||| |||||||| |||||||||| |||||||||| | |||||||| ||||||||| AAGTTGCAAT TCGTACGACC CCATATACGT GCCATCTTAG TGCCCCTCGG TGCATTGATG 481 ACCCATGTTT GGCCTCGATT GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA 14326 |||||||||| ||||||||| ||||||||| |||||||||| | || ||||| |||||||| ACCCATGTTT GGCCTCGATC AAGACGTCGA CCACCGCCTA TTGGGGTCGA CGCCGCCCAG 541 ACGGTGTATG GACAGTTGTT GCGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACACAA 14386 |||||||||| |||||||||| ||||||||| | |||||||| ||||||| || ||||||| || ACGGTGTATG GACAGTTGTT GCGTACCTCG AAAGTGGCAG CATAAGTGTA AGTCACAAAA 601 AGAAGGAAGA AGAGAACAAA AGAAGATGTC AAGTAGCCCA TGTTTGTTGA A 14437 ||| | || ||| |||||| ||||||| || |||||| ||| ||||||| || | GCAAGAAGGA AGAAAACAAA AGAAGATCTC AAGTAGGCCA TGTTTGTGGA A 652 hqPGS_C08HBa0235H18.1+_SGN-E214263- (13787 14437) ******************************************************************************** EST sequence 454 -strand 645 n (File: SGN-E211803-) 1 GGGCAAGTAA ATGTGCTNGT AGGATCGTCT NGTGGGTAGC TATAAGCATC GGGACATCTT 61 TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 121 TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 181 CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 241 GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 301 AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 361 GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 421 AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 481 ACCCATGTTT GGCCTCGATT GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA 541 ACGGTGTATG GACAGTTGTT GCGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACACAA 601 AGAAGGAAGA AGAGAACAAA AGAAGATGTC AAGTAGCCCA TGTTT Predicted gene structure (within gDNA segment 13177 to 15031): Exon 1 13787 14431 ( 645 n); cDNA 1 645 ( 645 n); score: 0.997 MATCH C08HBa0235H18.1+ SGN-E211803- 0.997 645 1.000 C PGS_C08HBa0235H18.1+_SGN-E211803- (13787 14431) Alignment (genomic DNA sequence = upper lines): GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 13846 |||||||||| ||||||| || |||||||||| ||||||||| |||||||||| |||||||||| GGGCAAGTAA ATGTGCTNGT AGGATCGTCT NGTGGGTAGC TATAAGCATC GGGACATCTT 60 TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 13906 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 120 TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 13966 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 180 CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 14026 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 240 GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 14086 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 300 AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 14146 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 360 GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 14206 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 420 AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 14266 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 480 ACCCATGTTT GGCCTCGATT GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA 14326 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCCATGTTT GGCCTCGATT GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA 540 ACGGTGTATG GACAGTTGTT GCGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACACAA 14386 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACGGTGTATG GACAGTTGTT GCGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACACAA 600 AGAAGGAAGA AGAGAACAAA AGAAGATGTC AAGTAGCCCA TGTTT 14431 |||||||||| |||||||||| |||||||||| |||||||||| ||||| AGAAGGAAGA AGAGAACAAA AGAAGATGTC AAGTAGCCCA TGTTT 645 hqPGS_C08HBa0235H18.1+_SGN-E211803- (13787 14431) ******************************************************************************** EST sequence 524 -strand 636 n (File: SGN-E211072-) 1 GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 61 TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 121 TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 181 CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 241 GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 301 AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 361 GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 421 AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 481 ACCCATGTTT GGCCTCGATT GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA 541 ACGGTGTATG GACAGTTGTT GCGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACACAA 601 AGAAGGAAGA AGAGAACAAA AGAAGATGTC AAGTAG Predicted gene structure (within gDNA segment 13177 to 15022): Exon 1 13787 14422 ( 636 n); cDNA 1 636 ( 636 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E211072- 1.000 636 1.000 C PGS_C08HBa0235H18.1+_SGN-E211072- (13787 14422) Alignment (genomic DNA sequence = upper lines): GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 13846 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 60 TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 13906 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 120 TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 13966 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 180 CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 14026 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 240 GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 14086 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 300 AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 14146 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 360 GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 14206 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 420 AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 14266 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 480 ACCCATGTTT GGCCTCGATT GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA 14326 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCCATGTTT GGCCTCGATT GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA 540 ACGGTGTATG GACAGTTGTT GCGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACACAA 14386 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACGGTGTATG GACAGTTGTT GCGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACACAA 600 AGAAGGAAGA AGAGAACAAA AGAAGATGTC AAGTAG 14422 |||||||||| |||||||||| |||||||||| |||||| AGAAGGAAGA AGAGAACAAA AGAAGATGTC AAGTAG 636 hqPGS_C08HBa0235H18.1+_SGN-E211072- (13787 14422) ******************************************************************************** EST sequence 583 -strand 630 n (File: SGN-E213091-) 1 GGGCAAGTAA ATGTGCTNGT AGGATCGTCT GTGGGTAGCT ATAAGCATCG GGACATCTTT 61 TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT 121 GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC 181 ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG 241 TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA 301 AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG 361 TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA 421 AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA 481 CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA 541 CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA 601 GAAGGAAGAA GAGAACAAAA GAAGATGTCA Predicted gene structure (within gDNA segment 13177 to 15017): Exon 1 13787 14417 ( 631 n); cDNA 1 630 ( 630 n); score: 0.997 MATCH C08HBa0235H18.1+ SGN-E213091- 0.997 631 1.002 C PGS_C08HBa0235H18.1+_SGN-E213091- (13787 14417) Alignment (genomic DNA sequence = upper lines): GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 13846 |||||||||| ||||||| || ||||||||| |||||||||| |||||||||| |||||||||| GGGCAAGTAA ATGTGCTNGT AGGATCGTC- TGTGGGTAGC TATAAGCATC GGGACATCTT 59 TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 13906 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 119 TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 13966 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 179 CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 14026 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 239 GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 14086 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 299 AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 14146 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 359 GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 14206 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 419 AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 14266 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 479 ACCCATGTTT GGCCTCGATT GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA 14326 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCCATGTTT GGCCTCGATT GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA 539 ACGGTGTATG GACAGTTGTT GCGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACACAA 14386 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACGGTGTATG GACAGTTGTT GCGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACACAA 599 AGAAGGAAGA AGAGAACAAA AGAAGATGTC A 14417 |||||||||| |||||||||| |||||||||| | AGAAGGAAGA AGAGAACAAA AGAAGATGTC A 630 hqPGS_C08HBa0235H18.1+_SGN-E213091- (13787 14417) ******************************************************************************** EST sequence 465 -strand 617 n (File: SGN-E211417-) 1 GGGCAAGTAA ATGTGCTGTA GGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTA 61 TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGATC CTTGGGTGCA ACAATATTGT 121 TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 181 CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 241 GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 301 AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 361 GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 421 AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 481 ACCCATGTTT GGCCTCGATT GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA 541 ACGGTGTATG GACAGTTGTT GCGTAAATCA ATAGTGGCAG CATAAGTATA AGTCACACAA 601 AGAAGGAAGA AGAGAAC Predicted gene structure (within gDNA segment 12988 to 15003): Exon 1 13787 14403 ( 617 n); cDNA 1 617 ( 617 n); score: 0.985 MATCH C08HBa0235H18.1+ SGN-E211417- 0.985 617 1.000 C PGS_C08HBa0235H18.1+_SGN-E211417- (13787 14403) Alignment (genomic DNA sequence = upper lines): GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 13846 |||||||||| ||||||| ||||||||| |||||||||| |||||||||| ||||||||| GGGCAAGTAA ATGTGCTGTA GGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTA 60 TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 13906 |||||||||| |||||||||| |||||||||| ||||||| | |||||||||| |||||||||| TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGATC CTTGGGTGCA ACAATATTGT 120 TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 13966 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 180 CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 14026 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 240 GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 14086 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 300 AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 14146 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 360 GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 14206 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 420 AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 14266 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 480 ACCCATGTTT GGCCTCGATT GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA 14326 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCCATGTTT GGCCTCGATT GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA 540 ACGGTGTATG GACAGTTGTT GCGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACACAA 14386 |||||||||| |||||||||| ||||| ||| |||||||||| |||||||||| |||||||||| ACGGTGTATG GACAGTTGTT GCGTAAATCA ATAGTGGCAG CATAAGTATA AGTCACACAA 600 AGAAGGAAGA AGAGAAC 14403 |||||||||| ||||||| AGAAGGAAGA AGAGAAC 617 hqPGS_C08HBa0235H18.1+_SGN-E211417- (13787 14403) ******************************************************************************** EST sequence 578 -strand 464 n (File: SGN-E201711-) 1 GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 61 TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 121 TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 181 CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 241 GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 301 AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 361 GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 421 AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCC Predicted gene structure (within gDNA segment 13177 to 14850): Exon 1 13787 14250 ( 464 n); cDNA 1 464 ( 464 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E201711- 1.000 464 1.000 C PGS_C08HBa0235H18.1+_SGN-E201711- (13787 14250) Alignment (genomic DNA sequence = upper lines): GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 13846 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 60 TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 13906 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 120 TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 13966 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 180 CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 14026 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 240 GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 14086 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 300 AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 14146 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 360 GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 14206 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 420 AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCC 14250 |||||||||| |||||||||| |||||||||| |||||||||| |||| AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCC 464 hqPGS_C08HBa0235H18.1+_SGN-E201711- (13787 14250) ******************************************************************************** EST sequence 616 -strand 639 n (File: SGN-E335205-) 1 GGCAAGTAAA TGTGTTAGTA GGATCATCTT GTGGGTAGCT ATACGCATCA GGACATCTTT 61 GTTTGAAAAA TCTCGACAAA TCAGTAGGGC CACATGGACC TTGTGTGCAA CAATATTGTT 121 GTCCTCCGAA CGTGGTACAA GGATTGTTAC ATCCTCCGGG TACCCTAAGT GAACCAGGAC 181 ATTCACCATT TATATTAGCC GTACAATGAA TTGCATGGCA TTTCCCTCCA CTAGGATTGG 241 TCGGGGCGAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAGAAATCTA 301 GGTTGCTAAA CTGGTCCAAG GCGTACTCGG CCAGGGTGTT TGGTGGTTTG CCCCACCCGG 361 TACATTGCAA GACCCCACCA CAATCACCAG TCTGACATGA ACCTCTACCA GCACCATCAA 421 AGTTGCAATT CGTACGACCC CATATACGTG CCATCTTAGT GCCCCTCGGT GCATTGATGA 481 CCCATGTTTG GCCTCGATCA AGACGTCGAC CACCGCCTAT TGGGGTCGAC GCCGCCCAGA 541 CGGTGTATGG ACAGTTGTTG CGTACCTCGA AAGTGGCAGC ATAAGTGTAA GTCACAAAAG 601 CAAGAAGGAA GAAAACAAAA GAAGATCTCA AGTAGGCCA Predicted gene structure (within gDNA segment 12431 to 16097): Exon 1 13788 14426 ( 639 n); cDNA 1 639 ( 639 n); score: 0.900 MATCH C08HBa0235H18.1+ SGN-E335205- 0.900 639 1.000 C PGS_C08HBa0235H18.1+_SGN-E335205- (13788 14426) Alignment (genomic DNA sequence = upper lines): GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT ATAAGCATCG GGACATCTTT 13847 |||||||||| |||| | ||| ||||| |||| |||||||||| ||| ||||| |||||||||| GGCAAGTAAA TGTGTTAGTA GGATCATCTT GTGGGTAGCT ATACGCATCA GGACATCTTT 60 TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT 13907 |||||||| | | ||||| || ||||||| |||||||||| ||| |||||| |||||||||| GTTTGAAAAA TCTCGACAAA TCAGTAGGGC CACATGGACC TTGTGTGCAA CAATATTGTT 120 GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC 13967 ||||||| || |||||||||| || ||||||| ||||||| || |||| |||| | | ||||| GTCCTCCGAA CGTGGTACAA GGATTGTTAC ATCCTCCGGG TACCCTAAGT GAACCAGGAC 180 ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG 14027 |||||||||| |||||| ||| || ||||||| |||| || || ||| |||||| ||||| || | ATTCACCATT TATATTAGCC GTACAATGAA TTGCATGGCA TTTCCCTCCA CTAGGATTGG 240 TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA 14087 | ||||| || |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| TCGGGGCGAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAGAAATCTA 300 AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG 14147 ||||||||| |||||||||| |||||||||| | |||||||| ||| |||||| ||||| |||| GGTTGCTAAA CTGGTCCAAG GCGTACTCGG CCAGGGTGTT TGGTGGTTTG CCCCACCCGG 360 TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA 14207 |||| || || ||| |||||| |||||||||| ||||||||| |||||| || ||| ||| || TACATTGCAA GACCCCACCA CAATCACCAG TCTGACATGA ACCTCTACCA GCACCATCAA 420 AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA 14267 |||||||| ||||||||| |||||||||| |||||||||| |||||||| |||||||||| AGTTGCAATT CGTACGACCC CATATACGTG CCATCTTAGT GCCCCTCGGT GCATTGATGA 480 CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA 14327 |||||||||| |||||||| |||||||||| |||||||||| || ||||| |||||||| | CCCATGTTTG GCCTCGATCA AGACGTCGAC CACCGCCTAT TGGGGTCGAC GCCGCCCAGA 540 CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA 14387 |||||||||| |||||||||| |||||||| | ||||||||| |||||| ||| |||||| || CGGTGTATGG ACAGTTGTTG CGTACCTCGA AAGTGGCAGC ATAAGTGTAA GTCACAAAAG 600 GAAGGAAGAA GAGAACAAAA GAAGATGTCA AGTAGCCCA 14426 ||| | ||| || ||||||| |||||| ||| ||||| ||| CAAGAAGGAA GAAAACAAAA GAAGATCTCA AGTAGGCCA 639 hqPGS_C08HBa0235H18.1+_SGN-E335205- (13788 14426) ******************************************************************************** EST sequence 642 -strand 642 n (File: SGN-E212383-) 1 CAAGTAAATG TGCTGTAGGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC 61 TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT 121 CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT 181 TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT 241 GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG 301 TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA 361 CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG 421 TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC 481 CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG 541 GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT AAGTATAAGT CACACAAAGA 601 AGGAAGAAGA GAACAAAAGA AGATGTCAAG TAGCCCATGT TT Predicted gene structure (within gDNA segment 13018 to 15031): Exon 1 13790 14431 ( 642 n); cDNA 1 642 ( 642 n); score: 0.994 MATCH C08HBa0235H18.1+ SGN-E212383- 0.994 642 1.000 C PGS_C08HBa0235H18.1+_SGN-E212383- (13790 14431) Alignment (genomic DNA sequence = upper lines): CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC 13849 |||||||||| |||| || |||||||||| |||||||||| |||||||||| |||||||||| CAAGTAAATG TGCTGTAGGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC 60 TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT 13909 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT 120 CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT 13969 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT 180 TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT 14029 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT 240 GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG 14089 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG 300 TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA 14149 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA 360 CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG 14209 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG 420 TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC 14269 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC 480 CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG 14329 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG 540 GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT AAGTATAAGT CACACAAAGA 14389 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT AAGTATAAGT CACACAAAGA 600 AGGAAGAAGA GAACAAAAGA AGATGTCAAG TAGCCCATGT TT 14431 |||||||||| |||||||||| |||||||||| |||||||||| || AGGAAGAAGA GAACAAAAGA AGATGTCAAG TAGCCCATGT TT 642 hqPGS_C08HBa0235H18.1+_SGN-E212383- (13790 14431) ******************************************************************************** EST sequence 603 -strand 594 n (File: SGN-E303485-) 1 CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC 61 TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT 121 CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT 181 TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT 241 GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG 301 TTGCTAAACT GGTCCAAGGC GTACTCGGAT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA 361 CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG 421 TTGCAACCAG TACGACCCCA TATACGTGCC ATTTTAGTTC CCCTCGGAGC ATTGATGACC 481 CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATGG GAGTCGATCC CGCCCAAACG 541 GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT AAGTATAAGT CACA Predicted gene structure (within gDNA segment 13180 to 14983): Exon 1 13790 14383 ( 594 n); cDNA 1 594 ( 594 n); score: 0.993 MATCH C08HBa0235H18.1+ SGN-E303485- 0.993 594 1.000 C PGS_C08HBa0235H18.1+_SGN-E303485- (13790 14383) Alignment (genomic DNA sequence = upper lines): CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC 13849 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC 60 TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT 13909 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT 120 CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT 13969 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT 180 TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT 14029 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT 240 GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG 14089 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG 300 TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA 14149 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| TTGCTAAACT GGTCCAAGGC GTACTCGGAT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA 360 CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG 14209 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG 420 TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC 14269 |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| TTGCAACCAG TACGACCCCA TATACGTGCC ATTTTAGTTC CCCTCGGAGC ATTGATGACC 480 CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG 14329 |||||||||| |||||||||| |||||||||| |||||||| | |||||||| | |||||||||| CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATGG GAGTCGATCC CGCCCAAACG 540 GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT AAGTATAAGT CACA 14383 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT AAGTATAAGT CACA 594 hqPGS_C08HBa0235H18.1+_SGN-E303485- (13790 14383) ******************************************************************************** EST sequence 575 -strand 498 n (File: SGN-E201255-) 1 AAGTAAAAGT ACTAGTTGGA TCGTCTTGAG GGTAACTATA GGCATCAGGA CATCTTTGTT 61 TGAAAAATCT TGACAATTCA GTAGGACCAC ATGGACCGTG ATTACAACAA TATTGTTGTC 121 CTCCGAATGT TGTACAAGGG TTGTTACATC CTCCAGGTAC CCTAAGTGAA CCAGGGCATT 181 CACCGTTTAT ATTGGCTGTG CATTGAATTG GATGACATTT TCCAGGGCCA GGCTTAGTTG 241 GGCCAAAAGA CATAGGGATG TTGAATCCAT CAATAACAGA AATATCCCAA AAATCTAGGT 301 TACCAAACTG GTTCAAAGCG TATTCAGCTA AGGTGTTTGG TGGTTTACCC CATCCTTTGC 361 AATCCAGGAC TCCACCACAA TCACCAGTCT GGCACCAACC TCTTCCAGCA CCATCAAAGT 421 TGCAATTAGT ACGACCCCAA ATACGTGCCA TTTTAGTGCC AGGTGGGGCC CAAAACCACC 481 AACTCTGACC TCTCTCGA Predicted gene structure (within gDNA segment 12245 to 17921): Exon 1 13791 14288 ( 498 n); cDNA 1 498 ( 498 n); score: 0.797 MATCH C08HBa0235H18.1+ SGN-E201255- 0.797 498 1.000 C PGS_C08HBa0235H18.1+_SGN-E201255- (13791 14288) Alignment (genomic DNA sequence = upper lines): AAGTAAATGT GCTTGTAGGA TCGTCTTGTG GGTAGCTATA AGCATCGGGA CATCTTTTCT 13850 ||||||| || || || ||| |||||||| | |||| ||||| ||||| ||| ||||||| | AAGTAAAAGT ACTAGTTGGA TCGTCTTGAG GGTAACTATA GGCATCAGGA CATCTTTGTT 60 TGAAAAATTT GGACAACTCT GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC 13910 |||||||| | ||||| || ||||| |||| ||||||| || | |||||| |||||||||| TGAAAAATCT TGACAATTCA GTAGGACCAC ATGGACCGTG ATTACAACAA TATTGTTGTC 120 CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT 13970 |||| || || ||||||||| |||||||||| |||||||||| | |||| | | ||| |||| CTCCGAATGT TGTACAAGGG TTGTTACATC CTCCAGGTAC CCTAAGTGAA CCAGGGCATT 180 CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG 14030 |||| ||||| |||||| ||| || ||||||| |||||||| ||| | | || || |||| CACCGTTTAT ATTGGCTGTG CATTGAATTG GATGACATTT TCCAGGGCCA GGCTTAGTTG 240 GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT 14090 || |||||| ||| || || || ||||||| | | | ||| ||| |||||| ||||||| || GGCCAAAAGA CATAGGGATG TTGAATCCAT CAATAACAGA AATATCCCAA AAATCTAGGT 300 TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC 14150 | | |||||| || ||| ||| || || |||| ||||||||| ||||| ||| ||||| | | TACCAAACTG GTTCAAAGCG TATTCAGCTA AGGTGTTTGG TGGTTTACCC CATCCTTTGC 360 ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA GCATTAAAGT 14210 | | | ||| |||||||||| |||||||||| | || ||| ||| || ||| ||| ||||| AATCCAGGAC TCCACCACAA TCACCAGTCT GGCACCAACC TCTTCCAGCA CCATCAAAGT 420 TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA TTGATGACCC 14270 ||||| ||| ||||||||| |||||||||| | ||||| || || || | || TGCAATTAGT ACGACCCCAA ATACGTGCCA TTTTAGTGCC AGGTGGGGCC CAAAACCACC 480 ATGTTTGGCC TCGATTGA 14288 | | || || || | || AACTCTGACC TCTCTCGA 498 hqPGS_C08HBa0235H18.1+_SGN-E201255- (13791 14288) ******************************************************************************** EST sequence 937 -strand 629 n (File: SGN-E276027-) 1 GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 61 AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 121 CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 181 CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 241 GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 301 CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 361 TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 421 CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT 481 GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG 541 TATGGACAGT TGTTGCGTAC CTCAATAGTG GCAGCATAAG TATAAGTCAC ACAAAGAAGG 601 AAGAAGAGAA CAAAAGAAGA TGTCAAGTA Predicted gene structure (within gDNA segment 13183 to 15021): Exon 1 13793 14421 ( 629 n); cDNA 1 629 ( 629 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E276027- 1.000 629 1.000 C PGS_C08HBa0235H18.1+_SGN-E276027- (13793 14421) Alignment (genomic DNA sequence = upper lines): GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 13852 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 60 AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 13912 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 120 CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 13972 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 180 CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 14032 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 240 GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 14092 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 300 CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 14152 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 360 TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 14212 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 420 CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT 14272 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT 480 GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG 14332 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG 540 TATGGACAGT TGTTGCGTAC CTCAATAGTG GCAGCATAAG TATAAGTCAC ACAAAGAAGG 14392 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATGGACAGT TGTTGCGTAC CTCAATAGTG GCAGCATAAG TATAAGTCAC ACAAAGAAGG 600 AAGAAGAGAA CAAAAGAAGA TGTCAAGTA 14421 |||||||||| |||||||||| ||||||||| AAGAAGAGAA CAAAAGAAGA TGTCAAGTA 629 hqPGS_C08HBa0235H18.1+_SGN-E276027- (13793 14421) ******************************************************************************** EST sequence 845 -strand 624 n (File: SGN-E307742-) 1 GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 61 AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 121 CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 181 CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 241 GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 301 CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 361 TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 421 CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT 481 GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG 541 TATGGACAGT TGTTGCGTAC CTCAATAGTG GCAGCATAAG TATAAGTCAC ACAAAGAAGG 601 AAGAAGAGAA CAAAAGAAGA TGTC Predicted gene structure (within gDNA segment 13183 to 15016): Exon 1 13793 14416 ( 624 n); cDNA 1 624 ( 624 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E307742- 1.000 624 1.000 C PGS_C08HBa0235H18.1+_SGN-E307742- (13793 14416) Alignment (genomic DNA sequence = upper lines): GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 13852 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 60 AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 13912 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 120 CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 13972 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 180 CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 14032 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 240 GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 14092 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 300 CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 14152 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 360 TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 14212 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 420 CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT 14272 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT 480 GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG 14332 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG 540 TATGGACAGT TGTTGCGTAC CTCAATAGTG GCAGCATAAG TATAAGTCAC ACAAAGAAGG 14392 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATGGACAGT TGTTGCGTAC CTCAATAGTG GCAGCATAAG TATAAGTCAC ACAAAGAAGG 600 AAGAAGAGAA CAAAAGAAGA TGTC 14416 |||||||||| |||||||||| |||| AAGAAGAGAA CAAAAGAAGA TGTC 624 hqPGS_C08HBa0235H18.1+_SGN-E307742- (13793 14416) ******************************************************************************** EST sequence 738 -strand 604 n (File: SGN-E255554-) 1 GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 61 AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 121 CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 181 CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 241 GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 301 CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 361 TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 421 CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT 481 GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG 541 TATGGACAGT TGTTGCGTAC CTCAATAGTG GCAGCATAAG TATAAGTCAC ACAAAGAAGG 601 AAGA Predicted gene structure (within gDNA segment 13183 to 14996): Exon 1 13793 14396 ( 604 n); cDNA 1 604 ( 604 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E255554- 1.000 604 1.000 C PGS_C08HBa0235H18.1+_SGN-E255554- (13793 14396) Alignment (genomic DNA sequence = upper lines): GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 13852 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 60 AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 13912 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 120 CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 13972 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 180 CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 14032 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 240 GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 14092 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 300 CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 14152 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 360 TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 14212 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 420 CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT 14272 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT 480 GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG 14332 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG 540 TATGGACAGT TGTTGCGTAC CTCAATAGTG GCAGCATAAG TATAAGTCAC ACAAAGAAGG 14392 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATGGACAGT TGTTGCGTAC CTCAATAGTG GCAGCATAAG TATAAGTCAC ACAAAGAAGG 600 AAGA 14396 |||| AAGA 604 hqPGS_C08HBa0235H18.1+_SGN-E255554- (13793 14396) ******************************************************************************** EST sequence 687 -strand 426 n (File: SGN-E203547-) 1 GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 61 AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 121 CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 181 CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 241 GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 301 CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 361 TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 421 CAACCA Predicted gene structure (within gDNA segment 13183 to 14818): Exon 1 13793 14218 ( 426 n); cDNA 1 426 ( 426 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E203547- 1.000 426 1.000 C PGS_C08HBa0235H18.1+_SGN-E203547- (13793 14218) Alignment (genomic DNA sequence = upper lines): GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 13852 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 60 AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 13912 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 120 CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 13972 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 180 CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 14032 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 240 GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 14092 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 300 CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 14152 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 360 TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 14212 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 420 CAACCA 14218 |||||| CAACCA 426 hqPGS_C08HBa0235H18.1+_SGN-E203547- (13793 14218) ******************************************************************************** EST sequence 724 -strand 367 n (File: SGN-E301453-) 1 GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 61 AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 121 CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 181 CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 241 GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 301 CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 361 TGTAAGA Predicted gene structure (within gDNA segment 13183 to 14759): Exon 1 13793 14159 ( 367 n); cDNA 1 367 ( 367 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E301453- 1.000 367 1.000 C PGS_C08HBa0235H18.1+_SGN-E301453- (13793 14159) Alignment (genomic DNA sequence = upper lines): GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 13852 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 60 AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 13912 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 120 CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 13972 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 180 CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 14032 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 240 GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 14092 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 300 CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 14152 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 360 TGTAAGA 14159 ||||||| TGTAAGA 367 hqPGS_C08HBa0235H18.1+_SGN-E301453- (13793 14159) ******************************************************************************** EST sequence 1000 -strand 463 n (File: SGN-E354546-) 1 AGTAGGATCA TCTGTGGGTA GCTATACGCA TCAGGACATC TTGTTTGAAA AATCTCGACA 61 AATCAGTAGG GCCACATGGA CCTTGTGTGC AACAATATTG TTGTCCTCCG AACGTGGTAC 121 AAGGATTGTT ACATCCTCCG GGGTACCCTA AGTGAACCAG GACATTCACC ATTTATATTA 181 GCCGTACAAT GAATTGCATG GCATTTCCCT CCACTAGGAT TGGTCGGGGC GAAAGTCATT 241 GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAGAAAT CTAGGTTGCT AAACTGGTCC 301 AAGGCGTACT CGGCCAGGGT GTTTGGTGGT TTGCCCCACC CGGTACATTG CAAGACCCCA 361 CCACAATCAC CAGTCTGACA TGAACCTCTA CCAGCACCAT CAAAGTTGCA ATTCGTACGA 421 CCCCATATAC GTGCCATCTT AGTGCCCCTC GGTGCATTGA TGA Predicted gene structure (within gDNA segment 12611 to 16208): Exon 1 13805 14267 ( 463 n); cDNA 2 463 ( 462 n); score: 0.895 MATCH C08HBa0235H18.1+ SGN-E354546- 0.895 463 1.000 C PGS_C08HBa0235H18.1+_SGN-E354546- (13805 14267) Alignment (genomic DNA sequence = upper lines): GTAGGATCGT CTTGTGGGTA GCTATAAGCA TCGGGACATC TTTTCTTGAA AAATTTGGAC 13864 |||||||| | | |||||||| |||||| ||| || ||||||| || | ||||| |||| | ||| GTAGGATCAT C-TGTGGGTA GCTATACGCA TCAGGACATC TTGT-TTGAA AAATCTCGAC 59 AACTCTGTAG GGCCACATGG ACCTTGGGTG CAACAATATT GTTGTCCTCC AAACGTGGTA 13924 || || |||| |||||||||| |||||| ||| |||||||||| |||||||||| ||||||||| AAATCAGTAG GGCCACATGG ACCTTGTGTG CAACAATATT GTTGTCCTCC GAACGTGGTA 119 CAAGGGTTGT TACATCCTCC -AGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT 13983 ||||| |||| |||||||||| |||||| | ||| | | | |||||||||| |||||||||| CAAGGATTGT TACATCCTCC GGGGTACCCT AAGTGAACCA GGACATTCAC CATTTATATT 179 GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT 14043 ||||| ||| |||||||| | | ||||| || ||||||||| || || |||| | |||||||| AGCCGTACAA TGAATTGCAT GGCATTTCCC TCCACTAGGA TTGGTCGGGG CGAAAGTCAT 239 TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC 14103 |||||||||| |||||||||| |||||||||| |||||| ||| |||| ||||| |||||||||| TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAGAAA TCTAGGTTGC TAAACTGGTC 299 CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC 14163 |||||||||| ||||| |||| ||||||| || ||||||||| |||||||| | | ||||| || CAAGGCGTAC TCGGCCAGGG TGTTTGGTGG TTTGCCCCAC CCGGTACATT GCAAGACCCC 359 ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG 14223 |||||||||| |||||||||| ||| |||||| || ||| || | |||||||| || ||||| ACCACAATCA CCAGTCTGAC ATGAACCTCT ACCAGCACCA TCAAAGTTGC AATTCGTACG 419 ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGA 14267 |||||||||| |||||||||| |||| ||||| ||| |||||| |||| ACCCCATATA CGTGCCATCT TAGTGCCCCT CGGTGCATTG ATGA 463 hqPGS_C08HBa0235H18.1+_SGN-E354546- (13805 14267) ******************************************************************************** EST sequence 977 -strand 389 n (File: SGN-E206738-) 1 TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT TTTCTTGAAA AATTTGGACA 61 ACTCTGTAGG GCCACATGGA CATTGGGTGC AACAATATTG TTGTCCTCCA AACGTGGTAC 121 AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG ACATTCACCA TTTATATTGC 181 CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT TGTTGGGGCA AAAGTCATTG 241 GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA AACTGGTCCA 301 AGGCGTACTC GGTTAGGGTG TTTGGGGGTT TGCCCCATCC GGTACACTGT AAGACTCCAC 361 CACAATCACC AGTGTGACAT GTACCTCTG Predicted gene structure (within gDNA segment 13196 to 14938): Exon 1 13806 14194 ( 389 n); cDNA 1 389 ( 389 n); score: 0.990 MATCH C08HBa0235H18.1+ SGN-E206738- 0.990 389 1.000 C PGS_C08HBa0235H18.1+_SGN-E206738- (13806 14194) Alignment (genomic DNA sequence = upper lines): TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT TTTCTTGAAA AATTTGGACA 13865 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT TTTCTTGAAA AATTTGGACA 60 ACTCTGTAGG GCCACATGGA CCTTGGGTGC AACAATATTG TTGTCCTCCA AACGTGGTAC 13925 |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| ACTCTGTAGG GCCACATGGA CATTGGGTGC AACAATATTG TTGTCCTCCA AACGTGGTAC 120 AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG ACATTCACCA TTTATATTGG 13985 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG ACATTCACCA TTTATATTGC 180 CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT TGTTGGGGCA AAAGTCATTG 14045 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT TGTTGGGGCA AAAGTCATTG 240 GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA AACTGGTCCA 14105 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA AACTGGTCCA 300 AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC GGTACACTGT AAGACTCCAC 14165 |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGCGTACTC GGTTAGGGTG TTTGGGGGTT TGCCCCATCC GGTACACTGT AAGACTCCAC 360 CACAATCACC AGTCTGACAT GTACCTCTG 14194 |||||||||| ||| |||||| ||||||||| CACAATCACC AGTGTGACAT GTACCTCTG 389 hqPGS_C08HBa0235H18.1+_SGN-E206738- (13806 14194) ******************************************************************************** EST sequence 480 -strand 530 n (File: SGN-E336261-) 1 ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 61 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 121 TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 181 TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 241 AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 301 TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT 361 ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT 421 TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT 481 CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA Predicted gene structure (within gDNA segment 13218 to 14957): Exon 1 13828 14357 ( 530 n); cDNA 1 530 ( 530 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E336261- 1.000 530 1.000 C PGS_C08HBa0235H18.1+_SGN-E336261- (13828 14357) Alignment (genomic DNA sequence = upper lines): ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 13887 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 60 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 13947 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 120 TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 14007 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 180 TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 14067 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 240 AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 14127 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 300 TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT 14187 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT 360 ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT 14247 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT 420 TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT 14307 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT 480 CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA 14357 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA 530 hqPGS_C08HBa0235H18.1+_SGN-E336261- (13828 14357) ******************************************************************************** EST sequence 1090 -strand 283 n (File: SGN-E258498-) 1 ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 61 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 121 TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 181 TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 241 AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCG Predicted gene structure (within gDNA segment 13218 to 14710): Exon 1 13828 14110 ( 283 n); cDNA 1 283 ( 283 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E258498- 1.000 283 1.000 C PGS_C08HBa0235H18.1+_SGN-E258498- (13828 14110) Alignment (genomic DNA sequence = upper lines): ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 13887 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 60 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 13947 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 120 TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 14007 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 180 TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 14067 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 240 AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCG 14110 |||||||||| |||||||||| |||||||||| |||||||||| ||| AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCG 283 hqPGS_C08HBa0235H18.1+_SGN-E258498- (13828 14110) ******************************************************************************** EST sequence 787 -strand 264 n (File: SGN-E251433-) 1 TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT 61 TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 121 ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 181 TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 241 GAAATGTCCC AAAAATCTAA GTTG Predicted gene structure (within gDNA segment 13219 to 14692): Exon 1 13829 14092 ( 264 n); cDNA 1 264 ( 264 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E251433- 1.000 264 1.000 C PGS_C08HBa0235H18.1+_SGN-E251433- (13829 14092) Alignment (genomic DNA sequence = upper lines): TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT 13888 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT 60 TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 13948 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 120 ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 14008 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 180 TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 14068 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 240 GAAATGTCCC AAAAATCTAA GTTG 14092 |||||||||| |||||||||| |||| GAAATGTCCC AAAAATCTAA GTTG 264 hqPGS_C08HBa0235H18.1+_SGN-E251433- (13829 14092) ******************************************************************************** EST sequence 459 -strand 583 n (File: SGN-E211899-) 1 AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACTTT 61 GGGTGCAACA ATATTGTNGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 121 CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 181 TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 241 AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 301 GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 361 CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 421 CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 481 GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT 541 AAGTATAAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA AGA Predicted gene structure (within gDNA segment 13220 to 15012): Exon 1 13830 14412 ( 583 n); cDNA 1 583 ( 583 n); score: 0.997 MATCH C08HBa0235H18.1+ SGN-E211899- 0.997 583 1.000 C PGS_C08HBa0235H18.1+_SGN-E211899- (13830 14412) Alignment (genomic DNA sequence = upper lines): AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 13889 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACTTT 60 GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 13949 |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| GGGTGCAACA ATATTGTNGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 120 CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 14009 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 180 TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 14069 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 240 AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 14129 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 300 GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 14189 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 360 CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 14249 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 420 CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 14309 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 480 GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT 14369 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT 540 AAGTATAAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA AGA 14412 |||||||||| |||||||||| |||||||||| |||||||||| ||| AAGTATAAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA AGA 583 hqPGS_C08HBa0235H18.1+_SGN-E211899- (13830 14412) ******************************************************************************** EST sequence 542 -strand 511 n (File: SGN-E306399-) 1 TCAGTAGGAC CACATGGACC GTGATTACAA CAATATTGTT GTCCTCCGAA TGTTGTACAA 61 GGGTTGTTAC ATCCTCCAGG TACCCTAAGT GAACCAGGGC ATTCACCGTT TATATTGGCT 121 GTGCATTGAA TTGGATGACA TTTTCCAGGG CCAGGCTTAG TTGGGCCAAA AGACATAGGG 181 ATGTTGAATC CATCAATAAC AGAAATATCC CAAAAATCTA GGTTACCAAA CTGGTTCAAA 241 GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT TGCAATCCAG GACTCCACCA 301 CAATCACCAG TCTGGCACCA ACCTCTTCCA GCACCATCAA AGTTGCAATT AGTACGACCC 361 CAAATACGTG CCATTTTAGT GCCAGGTGGG GCCCAAAACC ACCAACTCTG ACCTCTCTCG 421 AGACGTCGAC CACCTCCTAC GGGGACCGCT GCCGCCCAAA CGGTGTAGGG GCAGTTGTTA 481 TGGACCTCAA ATACACCGGA ACCATAAGTG T Predicted gene structure (within gDNA segment 13015 to 18821): Exon 1 13868 14379 ( 512 n); cDNA 1 509 ( 509 n); score: 0.787 MATCH C08HBa0235H18.1+ SGN-E306399- 0.787 512 1.002 C PGS_C08HBa0235H18.1+_SGN-E306399- (13868 14379) Alignment (genomic DNA sequence = upper lines): TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA 13927 || ||||| | |||||||||| || | ||| |||||||||| ||||||| || || |||||| TCAGTAGGAC CACATGGACC GTGATTACAA CAATATTGTT GTCCTCCGAA TGTTGTACAA 60 GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC 13987 |||||||||| |||||||||| |||| |||| | | ||| | ||||||| || ||||||||| GGGTTGTTAC ATCCTCCAGG TACCCTAAGT GAACCAGGGC ATTCACCGTT TATATTGGCT 120 GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 14047 ||||| |||| ||| ||||| |||||| | ||| || | ||||| |||| || ||| || GTGCATTGAA TTGGATGACA TTTTCCAGGG CCAGGCTTAG TTGGGCCAAA AGACATAGGG 180 ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 14107 || || |||| |||| | | |||||| ||| |||||||||| ||| | ||| ||||| ||| ATGTTGAATC CATCAATAAC AGAAATATCC CAAAAATCTA GGTTACCAAA CTGGTTCAAA 240 GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 14167 ||||| || | ||| |||||| ||| ||||| |||||||| | || | | |||||||||| GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT TGCAATCCAG GACTCCACCA 300 CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 14227 |||||||||| |||| || |||||| || ||| ||| || |||||||| |||||||||| CAATCACCAG TCTGGCACCA ACCTCTTCCA GCACCATCAA AGTTGCAATT AGTACGACCC 360 CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 14287 || ||||||| |||| ||||| || || || | ||| | || |||| | | CAAATACGTG CCATTTTAGT GCCAGGTGGG GCCCAAAACC ACCAACTCTG ACCTCTCTCG 420 AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG 14347 |||||||||| |||| |||| || || | |||||||||| ||||||| || |||||||| AGACGTCGAC CACCTCCTAC GGGGACCGCT GCCGCCCAAA CGGTGTAGGG GCAGTTGTTA 480 CGTACCTCAA TAGTGGCAGC ATAAGTATAA GT 14379 | ||||||| | | || | || |||| || TGGACCTCAA -A-T-ACACC GGAACCATAA GT 509 hqPGS_C08HBa0235H18.1+_SGN-E306399- (13868 14379) ******************************************************************************** EST sequence 1109 -strand 561 n (File: SGN-E273742-) 1 GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 61 TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 121 CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 181 TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 241 TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA 301 TCACCAGTCT GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT 361 ATACGTGCCA TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA 421 CGTCGACCAC CGCCTATCGG AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT 481 ACCTCAATAG TGGCAGCATA AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA 541 GATGTCAAGT AGCCCATGTT T Predicted gene structure (within gDNA segment 13261 to 15031): Exon 1 13871 14431 ( 561 n); cDNA 1 561 ( 561 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E273742- 1.000 561 1.000 C PGS_C08HBa0235H18.1+_SGN-E273742- (13871 14431) Alignment (genomic DNA sequence = upper lines): GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 13930 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 60 TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 13990 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 120 CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 14050 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 180 TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 14110 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 240 TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA 14170 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA 300 TCACCAGTCT GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT 14230 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACCAGTCT GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT 360 ATACGTGCCA TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA 14290 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATACGTGCCA TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA 420 CGTCGACCAC CGCCTATCGG AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT 14350 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTCGACCAC CGCCTATCGG AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT 480 ACCTCAATAG TGGCAGCATA AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA 14410 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTCAATAG TGGCAGCATA AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA 540 GATGTCAAGT AGCCCATGTT T 14431 |||||||||| |||||||||| | GATGTCAAGT AGCCCATGTT T 561 hqPGS_C08HBa0235H18.1+_SGN-E273742- (13871 14431) ******************************************************************************** EST sequence 1062 -strand 551 n (File: SGN-E210488-) 1 ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 61 TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 121 TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 181 ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 241 TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 301 CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC 361 CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 421 ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT 481 AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATGTCAA 541 GTAGCCCATG T Predicted gene structure (within gDNA segment 13269 to 15029): Exon 1 13879 14429 ( 551 n); cDNA 1 551 ( 551 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E210488- 1.000 551 1.000 C PGS_C08HBa0235H18.1+_SGN-E210488- (13879 14429) Alignment (genomic DNA sequence = upper lines): ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 13938 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 60 TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 13998 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 120 TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 14058 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 180 ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 14118 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 240 TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 14178 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 300 CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC 14238 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC 360 CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 14298 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 420 ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT 14358 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT 480 AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATGTCAA 14418 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATGTCAA 540 GTAGCCCATG T 14429 |||||||||| | GTAGCCCATG T 551 hqPGS_C08HBa0235H18.1+_SGN-E210488- (13879 14429) ******************************************************************************** EST sequence 933 -strand 538 n (File: SGN-E206152-) 1 ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 61 TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 121 TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 181 ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 241 TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 301 CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC 361 CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 421 ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT 481 AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATGTC Predicted gene structure (within gDNA segment 13269 to 15016): Exon 1 13879 14416 ( 538 n); cDNA 1 538 ( 538 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E206152- 1.000 538 1.000 C PGS_C08HBa0235H18.1+_SGN-E206152- (13879 14416) Alignment (genomic DNA sequence = upper lines): ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 13938 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 60 TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 13998 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 120 TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 14058 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 180 ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 14118 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 240 TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 14178 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 300 CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC 14238 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC 360 CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 14298 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 420 ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT 14358 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT 480 AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATGTC 14416 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATGTC 538 hqPGS_C08HBa0235H18.1+_SGN-E206152- (13879 14416) ******************************************************************************** EST sequence 1117 -strand 534 n (File: SGN-E288509-) 1 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 61 TACCTTAGGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 121 TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 181 AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 241 TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT 301 ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT 361 TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGACTG AGACGTCGAC CACCGCCTAT 421 CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGCAGC 481 ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA GAAGATGTCA AGTA Predicted gene structure (within gDNA segment 13278 to 15021): Exon 1 13888 14421 ( 534 n); cDNA 1 534 ( 534 n); score: 0.996 MATCH C08HBa0235H18.1+ SGN-E288509- 0.996 534 1.000 C PGS_C08HBa0235H18.1+_SGN-E288509- (13888 14421) Alignment (genomic DNA sequence = upper lines): TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 13947 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 60 TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 14007 ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACCTTAGGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 120 TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 14067 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 180 AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 14127 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 240 TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT 14187 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT 300 ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT 14247 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT 360 TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT 14307 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGACTG AGACGTCGAC CACCGCCTAT 420 CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGCAGC 14367 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGCAGC 480 ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA GAAGATGTCA AGTA 14421 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA GAAGATGTCA AGTA 534 hqPGS_C08HBa0235H18.1+_SGN-E288509- (13888 14421) ******************************************************************************** EST sequence 928 -strand 535 n (File: SGN-E275948-) 1 TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 61 ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 121 TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 181 GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 241 GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 301 CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 361 CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 421 GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT AGTGGCAGCA 481 TAAGTATAAG TCACTCAAAG AAGGAAGAAG AGAACAAAAG AAGATGTCAA GTAGC Predicted gene structure (within gDNA segment 13279 to 15023): Exon 1 13889 14423 ( 535 n); cDNA 1 535 ( 535 n); score: 0.998 MATCH C08HBa0235H18.1+ SGN-E275948- 0.998 535 1.000 C PGS_C08HBa0235H18.1+_SGN-E275948- (13889 14423) Alignment (genomic DNA sequence = upper lines): TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 13948 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 60 ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 14008 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 120 TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 14068 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 180 GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 14128 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 240 GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 14188 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 300 CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 14248 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 360 CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 14308 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 420 GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT AGTGGCAGCA 14368 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT AGTGGCAGCA 480 TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATGTCAA GTAGC 14423 |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| ||||| TAAGTATAAG TCACTCAAAG AAGGAAGAAG AGAACAAAAG AAGATGTCAA GTAGC 535 hqPGS_C08HBa0235H18.1+_SGN-E275948- (13889 14423) ******************************************************************************** EST sequence 778 -strand 455 n (File: SGN-E253792-) 1 TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 61 ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 121 TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 181 GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 241 GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 301 CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 361 CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 421 GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTT Predicted gene structure (within gDNA segment 13279 to 14943): Exon 1 13889 14343 ( 455 n); cDNA 1 455 ( 455 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E253792- 1.000 455 1.000 C PGS_C08HBa0235H18.1+_SGN-E253792- (13889 14343) Alignment (genomic DNA sequence = upper lines): TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 13948 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 60 ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 14008 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 120 TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 14068 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 180 GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 14128 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 240 GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 14188 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 300 CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 14248 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 360 CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 14308 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 420 GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTT 14343 |||||||||| |||||||||| |||||||||| ||||| GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTT 455 hqPGS_C08HBa0235H18.1+_SGN-E253792- (13889 14343) ******************************************************************************** EST sequence 1171 -strand 525 n (File: SGN-E208900-) 1 GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 61 CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 121 TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 181 AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 241 GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 301 CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 361 CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 421 GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT 481 AAGTATAAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA AGATG Predicted gene structure (within gDNA segment 13280 to 15014): Exon 1 13890 14414 ( 525 n); cDNA 1 525 ( 525 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E208900- 1.000 525 1.000 C PGS_C08HBa0235H18.1+_SGN-E208900- (13890 14414) Alignment (genomic DNA sequence = upper lines): GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 13949 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 60 CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 14009 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 120 TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 14069 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 180 AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 14129 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 240 GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 14189 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 300 CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 14249 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 360 CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 14309 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 420 GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT 14369 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT 480 AAGTATAAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA AGATG 14414 |||||||||| |||||||||| |||||||||| |||||||||| ||||| AAGTATAAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA AGATG 525 hqPGS_C08HBa0235H18.1+_SGN-E208900- (13890 14414) ******************************************************************************** EST sequence 769 -strand 542 n (File: SGN-E215146-) 1 GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 61 CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 121 TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 181 AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 241 GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 301 TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 361 CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG 421 AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA 481 AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT AGCCCATGTT 541 TG Predicted gene structure (within gDNA segment 13281 to 15032): Exon 1 13891 14432 ( 542 n); cDNA 1 542 ( 542 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E215146- 1.000 542 1.000 C PGS_C08HBa0235H18.1+_SGN-E215146- (13891 14432) Alignment (genomic DNA sequence = upper lines): GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 13950 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 60 CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 14010 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 120 TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 14070 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 180 AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 14130 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 240 GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 14190 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 300 TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 14250 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 360 CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG 14310 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG 420 AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA 14370 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA 480 AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT AGCCCATGTT 14430 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT AGCCCATGTT 540 TG 14432 || TG 542 hqPGS_C08HBa0235H18.1+_SGN-E215146- (13891 14432) ******************************************************************************** EST sequence 1004 -strand 531 n (File: SGN-E206874-) 1 GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 61 CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 121 TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 181 AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 241 GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 301 TCTGCCTGCA GCATTATAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 361 CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG 421 AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA 481 AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT A Predicted gene structure (within gDNA segment 13281 to 15021): Exon 1 13891 14421 ( 531 n); cDNA 1 531 ( 531 n); score: 0.998 MATCH C08HBa0235H18.1+ SGN-E206874- 0.998 531 1.000 C PGS_C08HBa0235H18.1+_SGN-E206874- (13891 14421) Alignment (genomic DNA sequence = upper lines): GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 13950 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 60 CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 14010 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 120 TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 14070 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 180 AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 14130 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 240 GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 14190 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 300 TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 14250 |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| TCTGCCTGCA GCATTATAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 360 CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG 14310 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG 420 AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA 14370 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA 480 AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT A 14421 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT A 531 hqPGS_C08HBa0235H18.1+_SGN-E206874- (13891 14421) ******************************************************************************** EST sequence 1200 -strand 492 n (File: SGN-E209439-) 1 GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 61 CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 121 TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 181 AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 241 GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 301 TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 361 CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG 421 AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA 481 AGTATAAGTC AC Predicted gene structure (within gDNA segment 13281 to 14982): Exon 1 13891 14382 ( 492 n); cDNA 1 492 ( 492 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E209439- 1.000 492 1.000 C PGS_C08HBa0235H18.1+_SGN-E209439- (13891 14382) Alignment (genomic DNA sequence = upper lines): GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 13950 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 60 CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 14010 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 120 TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 14070 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 180 AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 14130 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 240 GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 14190 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 300 TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 14250 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 360 CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG 14310 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG 420 AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA 14370 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA 480 AGTATAAGTC AC 14382 |||||||||| || AGTATAAGTC AC 492 hqPGS_C08HBa0235H18.1+_SGN-E209439- (13891 14382) ******************************************************************************** EST sequence 1157 -strand 481 n (File: SGN-E311822-) 1 GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 61 CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 121 TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 181 AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 241 GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 301 TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 361 CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG 421 AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA 481 A Predicted gene structure (within gDNA segment 13281 to 14971): Exon 1 13891 14371 ( 481 n); cDNA 1 481 ( 481 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E311822- 1.000 481 1.000 C PGS_C08HBa0235H18.1+_SGN-E311822- (13891 14371) Alignment (genomic DNA sequence = upper lines): GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 13950 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 60 CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 14010 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 120 TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 14070 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 180 AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 14130 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 240 GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 14190 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 300 TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 14250 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 360 CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG 14310 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG 420 AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA 14370 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA 480 A 14371 | A 481 hqPGS_C08HBa0235H18.1+_SGN-E311822- (13891 14371) ******************************************************************************** EST sequence 1102 -strand 411 n (File: SGN-E273584-) 1 GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 61 CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 121 TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 181 AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 241 GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 301 TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 361 CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC C Predicted gene structure (within gDNA segment 13281 to 14901): Exon 1 13891 14301 ( 411 n); cDNA 1 411 ( 411 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E273584- 1.000 411 1.000 C PGS_C08HBa0235H18.1+_SGN-E273584- (13891 14301) Alignment (genomic DNA sequence = upper lines): GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 13950 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 60 CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 14010 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 120 TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 14070 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 180 AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 14130 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 240 GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 14190 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 300 TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 14250 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 360 CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC C 14301 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC C 411 hqPGS_C08HBa0235H18.1+_SGN-E273584- (13891 14301) ******************************************************************************** EST sequence 897 -strand 499 n (File: SGN-E335641-) 1 GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC 61 TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT 121 CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 181 ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG 241 GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT 301 CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC 361 CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC GCCTATCGGA 421 GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT GGCAGCATAA 481 GTATAAGTCA CACAAAGAA Predicted gene structure (within gDNA segment 13282 to 14990): Exon 1 13892 14390 ( 499 n); cDNA 1 499 ( 499 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E335641- 1.000 499 1.000 C PGS_C08HBa0235H18.1+_SGN-E335641- (13892 14390) Alignment (genomic DNA sequence = upper lines): GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC 13951 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC 60 TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT 14011 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT 120 CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 14071 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 180 ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG 14131 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG 240 GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT 14191 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT 300 CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC 14251 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC 360 CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC GCCTATCGGA 14311 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC GCCTATCGGA 420 GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT GGCAGCATAA 14371 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT GGCAGCATAA 480 GTATAAGTCA CACAAAGAA 14390 |||||||||| ||||||||| GTATAAGTCA CACAAAGAA 499 hqPGS_C08HBa0235H18.1+_SGN-E335641- (13892 14390) ******************************************************************************** EST sequence 761 -strand 473 n (File: SGN-E334899-) 1 TGTGCAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGA TTGTTACATC CTCCGGGCAC 61 CCTAAGTGAA CCAGGACATT CACCATTTAT ATTAGCCGTA CAATGAATTG CATGGCATTT 121 CCCTCCACTA GGATTGGTCG GGGCGAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 181 AATGTCCCAG AAATCTAGGT TGCTAAACTG GTCCAAGGCG TACTCGGCCA GGGTGTTTGG 241 TGGTTTGCCC CACCCGGTAC ATTGCAAGAC CCCACCACAA TCACCAGTCT GACATGAACC 301 TCTACCAGCA CCATCAAAGT TGCAATTCGT ACGACCCCAT ATACGTGCCA TCTTAGTGCC 361 CCTCGGTGCA TTGATGACCC ATGTTTGGCC TCGATCAAGA CGTCGACCAC CGCCTATTGG 421 GGTCGACGCC GCCCAGACGG TGTATGGACA GTTGTTGCGT ACCTCGAAAG TGG Predicted gene structure (within gDNA segment 11976 to 15467): Exon 1 13892 14363 ( 472 n); cDNA 2 473 ( 472 n); score: 0.907 MATCH C08HBa0235H18.1+ SGN-E334899- 0.907 472 0.998 C PGS_C08HBa0235H18.1+_SGN-E334899- (13892 14363) Alignment (genomic DNA sequence = upper lines): GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC 13951 |||||||||| |||||||||| ||| |||||| |||||||| | |||||||||| ||| || ||| GTGCAACAAT ATTGTTGTCC TCCGAACGTG GTACAAGGAT TGTTACATCC TCCGGGCACC 61 TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT 14011 |||| | | ||||||||| |||||||||| || ||||| | |||||||||| || ||||| CTAAGTGAAC CAGGACATTC ACCATTTATA TTAGCCGTAC AATGAATTGC ATGGCATTTC 121 CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 14071 |||||||||| | || || || ||| |||||| |||||||||| |||||||||| |||||||||| CCTCCACTAG GATTGGTCGG GGCGAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 181 ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG 14131 |||||||| | |||||| ||| |||||||||| |||||||||| ||||||| || ||||||||| ATGTCCCAGA AATCTAGGTT GCTAAACTGG TCCAAGGCGT ACTCGGCCAG GGTGTTTGGT 241 GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT 14191 |||||||||| | |||||||| || ||||| |||||||||| |||||||||| ||||| |||| GGTTTGCCCC ACCCGGTACA TTGCAAGACC CCACCACAAT CACCAGTCTG ACATGAACCT 301 CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC 14251 || || ||| ||| |||||| |||| ||| |||||||||| |||||||||| |||||| ||| CTACCAGCAC CATCAAAGTT GCAATTCGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC 361 CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC GCCTATCGGA 14311 ||||| |||| |||||||||| |||||||||| |||| |||| |||||||||| |||||| || CTCGGTGCAT TGATGACCCA TGTTTGGCCT CGATCAAGAC GTCGACCACC GCCTATTGGG 421 GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT GG 14363 ||||| |||| |||| ||||| |||||||||| |||||||||| |||| | ||| || GTCGACGCCG CCCAGACGGT GTATGGACAG TTGTTGCGTA CCTCGAAAGT GG 473 hqPGS_C08HBa0235H18.1+_SGN-E334899- (13892 14363) ******************************************************************************** EST sequence 691 -strand 534 n (File: SGN-E250262-) 1 CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG 61 GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA 121 CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC 181 CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG 241 CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT 301 GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA 361 GCATTGATGA CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT CGGAGTCGAT 421 GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGCAGC ATAAGTATAA 481 GTCACACAAA GAAGGAAGAA GAGAACAAAA GAAGATGTCA AGTAGCCCAT GTTT Predicted gene structure (within gDNA segment 13288 to 15031): Exon 1 13898 14431 ( 534 n); cDNA 1 534 ( 534 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E250262- 1.000 534 1.000 C PGS_C08HBa0235H18.1+_SGN-E250262- (13898 14431) Alignment (genomic DNA sequence = upper lines): CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG 13957 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG 60 GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA 14017 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA 120 CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC 14077 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC 180 CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG 14137 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG 240 CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT 14197 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT 300 GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA 14257 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA 360 GCATTGATGA CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT CGGAGTCGAT 14317 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCATTGATGA CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT CGGAGTCGAT 420 GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGCAGC ATAAGTATAA 14377 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGCAGC ATAAGTATAA 480 GTCACACAAA GAAGGAAGAA GAGAACAAAA GAAGATGTCA AGTAGCCCAT GTTT 14431 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| GTCACACAAA GAAGGAAGAA GAGAACAAAA GAAGATGTCA AGTAGCCCAT GTTT 534 hqPGS_C08HBa0235H18.1+_SGN-E250262- (13898 14431) ******************************************************************************** EST sequence 993 -strand 516 n (File: SGN-E274937-) 1 AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACCTTAAGGG 61 CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC 121 TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC 181 AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC 241 CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG 301 CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG 361 CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC GGAGTCGATG 421 CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT AGTGGCAGCA TAAGTATAAG 481 TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATG Predicted gene structure (within gDNA segment 13289 to 15014): Exon 1 13899 14414 ( 516 n); cDNA 1 516 ( 516 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E274937- 1.000 516 1.000 C PGS_C08HBa0235H18.1+_SGN-E274937- (13899 14414) Alignment (genomic DNA sequence = upper lines): AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACCTTAAGGG 13958 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACCTTAAGGG 60 CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC 14018 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC 120 TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC 14078 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC 180 AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC 14138 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC 240 CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG 14198 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG 300 CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG 14258 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG 360 CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC GGAGTCGATG 14318 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC GGAGTCGATG 420 CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT AGTGGCAGCA TAAGTATAAG 14378 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT AGTGGCAGCA TAAGTATAAG 480 TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATG 14414 |||||||||| |||||||||| |||||||||| |||||| TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATG 516 hqPGS_C08HBa0235H18.1+_SGN-E274937- (13899 14414) ******************************************************************************** EST sequence 730 -strand 390 n (File: SGN-E205109-) 1 AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACATTAAGGG 61 CGCGAGTACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC 121 TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC 181 AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC 241 CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG 301 CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG 361 CATTGATGAC CCATGATTGG CCTTTATTGA Predicted gene structure (within gDNA segment 13289 to 15023): Exon 1 13899 14288 ( 390 n); cDNA 1 390 ( 390 n); score: 0.987 MATCH C08HBa0235H18.1+ SGN-E205109- 0.987 390 1.000 C PGS_C08HBa0235H18.1+_SGN-E205109- (13899 14288) Alignment (genomic DNA sequence = upper lines): AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACCTTAAGGG 13958 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACATTAAGGG 60 CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC 14018 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCGAGTACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC 120 TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC 14078 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC 180 AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC 14138 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC 240 CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG 14198 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG 300 CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG 14258 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG 360 CATTGATGAC CCATGTTTGG CCTCGATTGA 14288 |||||||||| ||||| |||| ||| ||||| CATTGATGAC CCATGATTGG CCTTTATTGA 390 hqPGS_C08HBa0235H18.1+_SGN-E205109- (13899 14288) ******************************************************************************** EST sequence 1047 -strand 530 n (File: SGN-E275676-) 1 TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 61 CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 121 GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 181 AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 241 CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 301 GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 361 TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATGCC 421 GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA AGTATAAGTC 481 ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT AGCCCATGTT Predicted gene structure (within gDNA segment 13291 to 15030): Exon 1 13901 14430 ( 530 n); cDNA 1 530 ( 530 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E275676- 1.000 530 1.000 C PGS_C08HBa0235H18.1+_SGN-E275676- (13901 14430) Alignment (genomic DNA sequence = upper lines): TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 13960 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 60 CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 14020 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 120 GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 14080 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 180 AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 14140 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 240 CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 14200 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 300 GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 14260 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 360 TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATGCC 14320 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATGCC 420 GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA AGTATAAGTC 14380 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA AGTATAAGTC 480 ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT AGCCCATGTT 14430 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT AGCCCATGTT 530 hqPGS_C08HBa0235H18.1+_SGN-E275676- (13901 14430) ******************************************************************************** EST sequence 985 -strand 521 n (File: SGN-E274932-) 1 TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 61 CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 121 GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 181 AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 241 CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 301 GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 361 TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATGCC 421 GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA AGTATAAGTC 481 ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT A Predicted gene structure (within gDNA segment 13291 to 15021): Exon 1 13901 14421 ( 521 n); cDNA 1 521 ( 521 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E274932- 1.000 521 1.000 C PGS_C08HBa0235H18.1+_SGN-E274932- (13901 14421) Alignment (genomic DNA sequence = upper lines): TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 13960 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 60 CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 14020 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 120 GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 14080 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 180 AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 14140 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 240 CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 14200 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 300 GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 14260 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 360 TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATGCC 14320 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATGCC 420 GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA AGTATAAGTC 14380 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA AGTATAAGTC 480 ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT A 14421 |||||||||| |||||||||| |||||||||| |||||||||| | ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT A 521 hqPGS_C08HBa0235H18.1+_SGN-E274932- (13901 14421) ******************************************************************************** EST sequence 773 -strand 506 n (File: SGN-E252003-) 1 TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 61 CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 121 GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 181 AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 241 CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 301 GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 361 TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATGCC 421 GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA AGTATAAGTC 481 ACACAAAGAA GGAAGAAGAG AACAAA Predicted gene structure (within gDNA segment 13291 to 15006): Exon 1 13901 14406 ( 506 n); cDNA 1 506 ( 506 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E252003- 1.000 506 1.000 C PGS_C08HBa0235H18.1+_SGN-E252003- (13901 14406) Alignment (genomic DNA sequence = upper lines): TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 13960 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 60 CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 14020 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 120 GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 14080 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 180 AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 14140 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 240 CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 14200 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 300 GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 14260 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 360 TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATGCC 14320 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATGCC 420 GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA AGTATAAGTC 14380 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA AGTATAAGTC 480 ACACAAAGAA GGAAGAAGAG AACAAA 14406 |||||||||| |||||||||| |||||| ACACAAAGAA GGAAGAAGAG AACAAA 506 hqPGS_C08HBa0235H18.1+_SGN-E252003- (13901 14406) ******************************************************************************** EST sequence 629 -strand 418 n (File: SGN-E204875-) 1 TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC ATTAAGGGCG 61 CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 121 GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 181 AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 241 CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 301 GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 361 TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATG Predicted gene structure (within gDNA segment 13291 to 14918): Exon 1 13901 14318 ( 418 n); cDNA 1 418 ( 418 n); score: 0.998 MATCH C08HBa0235H18.1+ SGN-E204875- 0.998 418 1.000 C PGS_C08HBa0235H18.1+_SGN-E204875- (13901 14318) Alignment (genomic DNA sequence = upper lines): TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 13960 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC ATTAAGGGCG 60 CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 14020 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 120 GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 14080 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 180 AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 14140 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 240 CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 14200 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 300 GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 14260 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 360 TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATG 14318 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATG 418 hqPGS_C08HBa0235H18.1+_SGN-E204875- (13901 14318) ******************************************************************************** EST sequence 1093 -strand 266 n (File: SGN-E209055-) 1 TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 61 CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 121 GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 181 AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 241 CATCCGGTAC ACTGTAAGAC TCCACC Predicted gene structure (within gDNA segment 13291 to 14766): Exon 1 13901 14166 ( 266 n); cDNA 1 266 ( 266 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E209055- 1.000 266 1.000 C PGS_C08HBa0235H18.1+_SGN-E209055- (13901 14166) Alignment (genomic DNA sequence = upper lines): TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 13960 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 60 CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 14020 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 120 GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 14080 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 180 AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 14140 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 240 CATCCGGTAC ACTGTAAGAC TCCACC 14166 |||||||||| |||||||||| |||||| CATCCGGTAC ACTGTAAGAC TCCACC 266 hqPGS_C08HBa0235H18.1+_SGN-E209055- (13901 14166) ******************************************************************************** EST sequence 1035 -strand 467 n (File: SGN-E266663-) 1 GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACTTTA AGGGCGCGAG 61 GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT 121 TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT 181 CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC 241 CGGTACGCTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT 301 TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA 361 TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATAGGAGTC GATGCCGCCC 421 AAACGGTGTA TGGACAGTTG TATAAGTACC TCAATAGTGG CAGCATA Predicted gene structure (within gDNA segment 13295 to 14970): Exon 1 13905 14370 ( 466 n); cDNA 1 467 ( 467 n); score: 0.984 MATCH C08HBa0235H18.1+ SGN-E266663- 0.984 466 0.998 C PGS_C08HBa0235H18.1+_SGN-E266663- (13905 14370) Alignment (genomic DNA sequence = upper lines): GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG 13964 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACTTTA AGGGCGCGAG 60 GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT 14024 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT 120 TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT 14084 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT 180 CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC 14144 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC 240 CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT 14204 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGTACGCTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT 300 TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA 14264 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA 360 TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC 14324 |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATAGGAGTC GATGCCGCCC 420 AAACGGTGTA TGGACAGTTG T-TGCGTACC TCAATAGTGG CAGCATA 14370 |||||||||| |||||||||| | | ||||| |||||||||| ||||||| AAACGGTGTA TGGACAGTTG TATAAGTACC TCAATAGTGG CAGCATA 467 hqPGS_C08HBa0235H18.1+_SGN-E266663- (13905 14370) ******************************************************************************** EST sequence 1011 -strand 524 n (File: SGN-E246947-) 1 GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC 61 ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG 121 TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA 181 AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG 241 TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA 301 AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA 361 CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA 421 CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA 481 GAAGGAAGAA GAGAACAAAA GAAGATGTCA AGTAGCCCAT GTTT Predicted gene structure (within gDNA segment 13298 to 15031): Exon 1 13908 14431 ( 524 n); cDNA 1 524 ( 524 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E246947- 1.000 524 1.000 C PGS_C08HBa0235H18.1+_SGN-E246947- (13908 14431) Alignment (genomic DNA sequence = upper lines): GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC 13967 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC 60 ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG 14027 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG 120 TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA 14087 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA 180 AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG 14147 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG 240 TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA 14207 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA 300 AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA 14267 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA 360 CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA 14327 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA 420 CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA 14387 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA 480 GAAGGAAGAA GAGAACAAAA GAAGATGTCA AGTAGCCCAT GTTT 14431 |||||||||| |||||||||| |||||||||| |||||||||| |||| GAAGGAAGAA GAGAACAAAA GAAGATGTCA AGTAGCCCAT GTTT 524 hqPGS_C08HBa0235H18.1+_SGN-E246947- (13908 14431) ******************************************************************************** EST sequence 1031 -strand 350 n (File: SGN-E275799-) 1 CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC TTTAAGGGCG CGAGGACATT 61 CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG 121 GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT 181 TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC 241 ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA GCATTAAAGT 301 TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA Predicted gene structure (within gDNA segment 13301 to 14860): Exon 1 13911 14260 ( 350 n); cDNA 1 350 ( 350 n); score: 0.997 MATCH C08HBa0235H18.1+ SGN-E275799- 0.997 350 1.000 C PGS_C08HBa0235H18.1+_SGN-E275799- (13911 14260) Alignment (genomic DNA sequence = upper lines): CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT 13970 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC TTTAAGGGCG CGAGGACATT 60 CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG 14030 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG 120 GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT 14090 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT 180 TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC 14150 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC 240 ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA GCATTAAAGT 14210 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA GCATTAAAGT 300 TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 14260 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 350 hqPGS_C08HBa0235H18.1+_SGN-E275799- (13911 14260) ******************************************************************************** EST sequence 765 -strand 518 n (File: SGN-E214938-) 1 AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC 61 ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 121 AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 181 AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 241 TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 301 ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 361 TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA 421 TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA 481 GAAGAGAACA AAAGAAGATG TCAAGTAGCC CATGTTTG Predicted gene structure (within gDNA segment 13305 to 15032): Exon 1 13915 14432 ( 518 n); cDNA 1 518 ( 518 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E214938- 1.000 518 1.000 C PGS_C08HBa0235H18.1+_SGN-E214938- (13915 14432) Alignment (genomic DNA sequence = upper lines): AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC 13974 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC 60 ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 14034 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 120 AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 14094 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 180 AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 14154 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 240 TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 14214 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 300 ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 14274 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 360 TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA 14334 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA 420 TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA 14394 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA 480 GAAGAGAACA AAAGAAGATG TCAAGTAGCC CATGTTTG 14432 |||||||||| |||||||||| |||||||||| |||||||| GAAGAGAACA AAAGAAGATG TCAAGTAGCC CATGTTTG 518 hqPGS_C08HBa0235H18.1+_SGN-E214938- (13915 14432) ******************************************************************************** EST sequence 674 -strand 457 n (File: SGN-E203662-) 1 AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC 61 ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 121 AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 181 AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 241 TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 301 ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 361 TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA 421 TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAA Predicted gene structure (within gDNA segment 13305 to 14971): Exon 1 13915 14371 ( 457 n); cDNA 1 457 ( 457 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E203662- 1.000 457 1.000 C PGS_C08HBa0235H18.1+_SGN-E203662- (13915 14371) Alignment (genomic DNA sequence = upper lines): AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC 13974 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC 60 ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 14034 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 120 AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 14094 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 180 AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 14154 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 240 TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 14214 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 300 ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 14274 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 360 TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA 14334 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA 420 TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAA 14371 |||||||||| |||||||||| |||||||||| ||||||| TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAA 457 hqPGS_C08HBa0235H18.1+_SGN-E203662- (13915 14371) ******************************************************************************** EST sequence 665 -strand 490 n (File: SGN-E204618-) 1 CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC ATTTATATTG 61 CCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC AAAAGTCATT 121 GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT AAACTGGTCC 181 AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG TAAGACTCCT 241 CCACAATCAC CAGTTTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA ACCAGTACGA 301 CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT TTGGCCTCGA 361 TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA TGGACAGTTG 421 TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA GAACAGAACA 481 AAAGAAGATG Predicted gene structure (within gDNA segment 13315 to 15014): Exon 1 13925 14414 ( 490 n); cDNA 1 490 ( 490 n); score: 0.992 MATCH C08HBa0235H18.1+ SGN-E204618- 0.992 490 1.000 C PGS_C08HBa0235H18.1+_SGN-E204618- (13925 14414) Alignment (genomic DNA sequence = upper lines): CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC ATTTATATTG 13984 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC ATTTATATTG 60 GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC AAAAGTCATT 14044 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC AAAAGTCATT 120 GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT AAACTGGTCC 14104 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT AAACTGGTCC 180 AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG TAAGACTCCA 14164 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG TAAGACTCCT 240 CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA ACCAGTACGA 14224 |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| CCACAATCAC CAGTTTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA ACCAGTACGA 300 CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT TTGGCCTCGA 14284 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT TTGGCCTCGA 360 TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA TGGACAGTTG 14344 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA TGGACAGTTG 420 TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA GAAGAGAACA 14404 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA GAACAGAACA 480 AAAGAAGATG 14414 |||||||||| AAAGAAGATG 490 hqPGS_C08HBa0235H18.1+_SGN-E204618- (13925 14414) ******************************************************************************** EST sequence 842 -strand 467 n (File: SGN-E202224-) 1 CAAGGGTTGT TACATCCTCC AGGTCCTTTA AGGGCGCGAG GACATTCACC ATTTATATTG 61 GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC AAAAGTCATT 121 GCAATATTAA ATCCATGGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT AAACTGGTCC 181 AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG TAAGACTCCA 241 CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA ACCAGTACGA 301 CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT TTGGCCTCGA 361 TTGAGACGTC GACCACCGCC TATCGGAGTA GATGCCGCCC AAACGGTGTA TGGACAGTTG 421 TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAG Predicted gene structure (within gDNA segment 13315 to 14991): Exon 1 13925 14391 ( 467 n); cDNA 1 467 ( 467 n); score: 0.989 MATCH C08HBa0235H18.1+ SGN-E202224- 0.989 467 1.000 C PGS_C08HBa0235H18.1+_SGN-E202224- (13925 14391) Alignment (genomic DNA sequence = upper lines): CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC ATTTATATTG 13984 |||||||||| |||||||||| |||| | ||| |||||||||| |||||||||| |||||||||| CAAGGGTTGT TACATCCTCC AGGTCCTTTA AGGGCGCGAG GACATTCACC ATTTATATTG 60 GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC AAAAGTCATT 14044 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC AAAAGTCATT 120 GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT AAACTGGTCC 14104 | |||||||| |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| GCAATATTAA ATCCATGGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT AAACTGGTCC 180 AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG TAAGACTCCA 14164 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG TAAGACTCCA 240 CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA ACCAGTACGA 14224 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA ACCAGTACGA 300 CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT TTGGCCTCGA 14284 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT TTGGCCTCGA 360 TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA TGGACAGTTG 14344 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| TTGAGACGTC GACCACCGCC TATCGGAGTA GATGCCGCCC AAACGGTGTA TGGACAGTTG 420 TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAG 14391 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAG 467 hqPGS_C08HBa0235H18.1+_SGN-E202224- (13925 14391) ******************************************************************************** EST sequence 856 -strand 436 n (File: SGN-E206535-) 1 AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC 61 CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG 121 AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA 181 GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC 241 ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC 301 CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG ACCCATGTTT GGCCTCGATT 361 GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA ACGGTGTATG GACAGTTGTT 421 GCGTACCTCA ATAGTG Predicted gene structure (within gDNA segment 13317 to 14962): Exon 1 13927 14362 ( 436 n); cDNA 1 436 ( 436 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E206535- 1.000 436 1.000 C PGS_C08HBa0235H18.1+_SGN-E206535- (13927 14362) Alignment (genomic DNA sequence = upper lines): AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC 13986 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC 60 CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG 14046 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG 120 AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA 14106 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA 180 GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC 14166 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC 240 ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC 14226 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC 300 CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG ACCCATGTTT GGCCTCGATT 14286 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG ACCCATGTTT GGCCTCGATT 360 GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA ACGGTGTATG GACAGTTGTT 14346 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA ACGGTGTATG GACAGTTGTT 420 GCGTACCTCA ATAGTG 14362 |||||||||| |||||| GCGTACCTCA ATAGTG 436 hqPGS_C08HBa0235H18.1+_SGN-E206535- (13927 14362) ******************************************************************************** EST sequence 916 -strand 502 n (File: SGN-E274566-) 1 GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC 61 GTGCAATGAA TTGCGTGACA TTTTCCTTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG 121 AATATTAAAT CCATCGGCTA AAGTAATGTC CCAAAAATGT AAGTTGCTCA ACTGGTCCAA 181 GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC 241 ACAATCACCA GTGTGACATG TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTCCGACC 301 CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG ACCCATGTTT GGCCTCGATT 361 GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA ACGGTGTATG GACAGTTGTT 421 GTGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACCCAA AGAAGGAAGA AGAGACCAAA 481 AGAAGATGTC TAGTAGGCCA TG Predicted gene structure (within gDNA segment 13318 to 15289): Exon 1 13928 14428 ( 501 n); cDNA 1 502 ( 502 n); score: 0.973 MATCH C08HBa0235H18.1+ SGN-E274566- 0.973 501 0.998 C PGS_C08HBa0235H18.1+_SGN-E274566- (13928 14428) Alignment (genomic DNA sequence = upper lines): GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC 13987 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC 60 GTGCAATGAA TTGCGTGACA TTTTCC-TCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG 14046 |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| GTGCAATGAA TTGCGTGACA TTTTCCTTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG 120 AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA 14106 |||||||||| |||||| ||| ||| |||||| |||||||| | |||||||| | |||||||||| AATATTAAAT CCATCGGCTA AAGTAATGTC CCAAAAATGT AAGTTGCTCA ACTGGTCCAA 180 GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC 14166 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC 240 ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC 14226 |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| |||| ||||| ACAATCACCA GTGTGACATG TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTCCGACC 300 CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG ACCCATGTTT GGCCTCGATT 14286 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG ACCCATGTTT GGCCTCGATT 360 GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA ACGGTGTATG GACAGTTGTT 14346 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA ACGGTGTATG GACAGTTGTT 420 GCGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACACAA AGAAGGAAGA AGAGAACAAA 14406 | |||||||| |||||||||| |||||||||| |||||| ||| |||||||||| ||||| |||| GTGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACCCAA AGAAGGAAGA AGAGACCAAA 480 AGAAGATGTC AAGTAGCCCA TG 14428 |||||||||| ||||| ||| || AGAAGATGTC TAGTAGGCCA TG 502 hqPGS_C08HBa0235H18.1+_SGN-E274566- (13928 14428) ******************************************************************************** EST sequence 1205 -strand 487 n (File: SGN-E209259-) 1 GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC 61 GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 121 ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 181 GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 241 CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 301 CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 361 AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG 421 CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA 481 GAAGATG Predicted gene structure (within gDNA segment 13318 to 15014): Exon 1 13928 14414 ( 487 n); cDNA 1 487 ( 487 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E209259- 1.000 487 1.000 C PGS_C08HBa0235H18.1+_SGN-E209259- (13928 14414) Alignment (genomic DNA sequence = upper lines): GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC 13987 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC 60 GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 14047 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 120 ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 14107 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 180 GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 14167 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 240 CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 14227 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 300 CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 14287 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 360 AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG 14347 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG 420 CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA 14407 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA 480 GAAGATG 14414 ||||||| GAAGATG 487 hqPGS_C08HBa0235H18.1+_SGN-E209259- (13928 14414) ******************************************************************************** EST sequence 826 -strand 493 n (File: SGN-E205594-) 1 GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT 61 GCAATGAATT GCGTGACATT TTCCTCCATT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT 121 ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC 181 GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA 241 ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA 301 TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG 361 ACGTCGACCA CCGCCTATCG GAGTTGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG 421 TACCTCAATA GTGGCAGCAT AAGCACCAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA 481 AGATGTCAAG TAG Predicted gene structure (within gDNA segment 10053 to 15445): Exon 1 13930 14422 ( 493 n); cDNA 1 493 ( 493 n); score: 0.990 MATCH C08HBa0235H18.1+ SGN-E205594- 0.990 493 1.000 C PGS_C08HBa0235H18.1+_SGN-E205594- (13930 14422) Alignment (genomic DNA sequence = upper lines): GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT 13989 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT 60 GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT 14049 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| GCAATGAATT GCGTGACATT TTCCTCCATT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT 120 ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC 14109 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC 180 GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA 14169 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA 240 ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA 14229 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA 300 TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG 14289 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG 360 ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG 14349 |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| ACGTCGACCA CCGCCTATCG GAGTTGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG 420 TACCTCAATA GTGGCAGCAT AAGTATAAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA 14409 |||||||||| |||||||||| ||| | ||| |||||||||| |||||||||| |||||||||| TACCTCAATA GTGGCAGCAT AAGCACCAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA 480 AGATGTCAAG TAG 14422 |||||||||| ||| AGATGTCAAG TAG 493 hqPGS_C08HBa0235H18.1+_SGN-E205594- (13930 14422) ******************************************************************************** EST sequence 890 -strand 455 n (File: SGN-E205290-) 1 GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT 61 GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT 121 ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC 181 GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA 241 ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA 301 TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG 361 ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG GTGTATCCAC AGTTGTTGCG 421 TACCTCAATA GTGGCAGCAT AAGTATAAGT CACAC Predicted gene structure (within gDNA segment 13320 to 14984): Exon 1 13930 14384 ( 455 n); cDNA 1 455 ( 455 n); score: 0.996 MATCH C08HBa0235H18.1+ SGN-E205290- 0.996 455 1.000 C PGS_C08HBa0235H18.1+_SGN-E205290- (13930 14384) Alignment (genomic DNA sequence = upper lines): GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT 13989 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT 60 GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT 14049 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT 120 ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC 14109 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC 180 GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA 14169 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA 240 ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA 14229 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA 300 TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG 14289 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG 360 ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG 14349 |||||||||| |||||||||| |||||||||| |||||||||| |||||| || |||||||||| ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG GTGTATCCAC AGTTGTTGCG 420 TACCTCAATA GTGGCAGCAT AAGTATAAGT CACAC 14384 |||||||||| |||||||||| |||||||||| ||||| TACCTCAATA GTGGCAGCAT AAGTATAAGT CACAC 455 hqPGS_C08HBa0235H18.1+_SGN-E205290- (13930 14384) ******************************************************************************** EST sequence 949 -strand 513 n (File: SGN-E207077-) 1 ATTGTTACAT CTCCGGGTAC CCTAANGTGA ACCAGGACAT TCACCATTTA TATTAGCCGT 61 ACAATGAATT GCATGGCATT TCCCTCCACT AGGATTGGTC GGGGCGAAAG TCATTGGAAT 121 ATTAAATCCA TCGACTAAAG AAATGTCCCA GAAATCTAGG TTGCTAAACT GGTCCAAGGC 181 GTACTCGGCC AGGGTGTTTG GTGGTTTGCC CCACCCGGTA CATTGCAAGA CCCCACCACA 241 ATCACCAGTC TGACATGAAC CTCTACCAGC ACCATCAAAG TTGCAATTCG TACGACCCCA 301 TATACGTGCC ATCTTAGTGC CCCTCGGTGC ATTGATGACC CATGTTTGGC CTCGATCAAG 361 ACGTCGACCA CCGCCTATTG GGGTCGACGC CGCCCAGACG GTGTATGGAC AGTTGTTGCG 421 TACCTCGAAA GTGGCAGCAT AAGTGTAAGT CACAAAAGCA AGAAGGAAGA AAACAAAAGA 481 AGATCTCAAG TAGGCCATGT TTGTGGAACT ATT Predicted gene structure (within gDNA segment 12366 to 16257): Exon 1 13931 14437 ( 507 n); cDNA 2 508 ( 507 n); score: 0.893 MATCH C08HBa0235H18.1+ SGN-E207077- 0.893 507 0.988 C PGS_C08HBa0235H18.1+_SGN-E207077- (13931 14437) Alignment (genomic DNA sequence = upper lines): TTGTTACATC CTCCAGGTAC CTTAAGG-GC GCGAGGACAT TCACCATTTA TATTGGCCGT 13989 ||||||||| |||| ||||| | ||| | | | ||||||| |||||||||| |||| ||||| TTGTTACAT- CTCCGGGTAC CCTAANGTGA ACCAGGACAT TCACCATTTA TATTAGCCGT 60 GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT 14049 ||||||||| || || |||| | |||||||| ||| || || ||||| |||| |||||||||| ACAATGAATT GCATGGCATT TCCCTCCACT AGGATTGGTC GGGGCGAAAG TCATTGGAAT 120 ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC 14109 |||||||||| |||||||||| |||||||||| ||||||| | |||||||||| |||||||||| ATTAAATCCA TCGACTAAAG AAATGTCCCA GAAATCTAGG TTGCTAAACT GGTCCAAGGC 180 GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA 14169 ||||||||| |||||||||| | |||||||| ||| |||||| || || |||| | |||||||| GTACTCGGCC AGGGTGTTTG GTGGTTTGCC CCACCCGGTA CATTGCAAGA CCCCACCACA 240 ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA 14229 |||||||||| ||||||| || |||| || || | ||| |||| |||||| | |||||||||| ATCACCAGTC TGACATGAAC CTCTACCAGC ACCATCAAAG TTGCAATTCG TACGACCCCA 300 TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG 14289 |||||||||| |||||||| | ||||||| || |||||||||| |||||||||| |||||| || TATACGTGCC ATCTTAGTGC CCCTCGGTGC ATTGATGACC CATGTTTGGC CTCGATCAAG 360 ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG 14349 |||||||||| |||||||| | | ||||| || |||||| ||| |||||||||| |||||||||| ACGTCGACCA CCGCCTATTG GGGTCGACGC CGCCCAGACG GTGTATGGAC AGTTGTTGCG 420 TACCTCAATA GTGGCAGCAT AAGTATAAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA 14409 |||||| | | |||||||||| |||| ||||| |||| || | || | ||||| ||||||||| TACCTCGAAA GTGGCAGCAT AAGTGTAAGT CACAAAAGCA AGAAGGAAGA AAACAAAAGA 480 AGATGTCAAG TAGCCCATGT TTGTTGAA 14437 |||| ||||| ||| |||||| |||| ||| AGATCTCAAG TAGGCCATGT TTGTGGAA 508 hqPGS_C08HBa0235H18.1+_SGN-E207077- (13931 14437) ******************************************************************************** EST sequence 510 -strand 474 n (File: SGN-E250954-) 1 TTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA 61 ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG GCAAAAGTCA TTGGAATATT 121 AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG CTAAACTGGT CCAAGGCGTA 181 CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC TGTAAGACTC CACCACAATC 241 ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG CAACCAGTAC GACCCCATAT 301 ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG 361 TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG TATGGACAGT TGTTGCGTAC 421 CTCAATAGTG CGATAGTAAG TATAAGTCAC ACAAAGAAGG AAGAAGAGAA CAAA Predicted gene structure (within gDNA segment 13314 to 15006): Exon 1 13934 14406 ( 473 n); cDNA 2 474 ( 473 n); score: 0.989 MATCH C08HBa0235H18.1+ SGN-E250954- 0.989 473 0.998 C PGS_C08HBa0235H18.1+_SGN-E250954- (13934 14406) Alignment (genomic DNA sequence = upper lines): TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT GGCCGTGCAA 13993 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT GGCCGTGCAA 61 TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT TGGAATATTA 14053 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT TGGAATATTA 121 AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGCGTAC 14113 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGCGTAC 181 TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC ACCACAATCA 14173 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC ACCACAATCA 241 CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG ACCCCATATA 14233 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG ACCCCATATA 301 CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG TTTGGCCTCG ATTGAGACGT 14293 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG TTTGGCCTCG ATTGAGACGT 361 CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT ATGGACAGTT GTTGCGTACC 14353 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT ATGGACAGTT GTTGCGTACC 421 TCAATAGTGG CAGCATAAGT ATAAGTCACA CAAAGAAGGA AGAAGAGAAC AAA 14406 ||||||||| | ||||| |||||||||| |||||||||| |||||||||| ||| TCAATAGTGC GATAGTAAGT ATAAGTCACA CAAAGAAGGA AGAAGAGAAC AAA 474 hqPGS_C08HBa0235H18.1+_SGN-E250954- (13934 14406) ******************************************************************************** EST sequence 567 -strand 391 n (File: SGN-E201143-) 1 TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC 61 CTCCACTAGG TTTTGTTGGG GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA 121 TGTCCCAAAA ATCTAAGTTG CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG 181 GTTTGCCCCA TCCGGTACAC TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC 241 TGCCTGCAGC ATTAAAGTTG CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC 301 TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG 361 TCGATGCCGC CCAAGCGGTG TATGGACAGT T Predicted gene structure (within gDNA segment 13343 to 14943): Exon 1 13953 14343 ( 391 n); cDNA 1 391 ( 391 n); score: 0.997 MATCH C08HBa0235H18.1+ SGN-E201143- 0.997 391 1.000 C PGS_C08HBa0235H18.1+_SGN-E201143- (13953 14343) Alignment (genomic DNA sequence = upper lines): TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC 14012 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC 60 CTCCACTAGG TTTTGTTGGG GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA 14072 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCCACTAGG TTTTGTTGGG GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA 120 TGTCCCAAAA ATCTAAGTTG CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG 14132 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTCCCAAAA ATCTAAGTTG CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG 180 GTTTGCCCCA TCCGGTACAC TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC 14192 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTGCCCCA TCCGGTACAC TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC 240 TGCCTGCAGC ATTAAAGTTG CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC 14252 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCCTGCAGC ATTAAAGTTG CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC 300 TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG 14312 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG 360 TCGATGCCGC CCAAACGGTG TATGGACAGT T 14343 |||||||||| |||| ||||| |||||||||| | TCGATGCCGC CCAAGCGGTG TATGGACAGT T 391 hqPGS_C08HBa0235H18.1+_SGN-E201143- (13953 14343) ******************************************************************************** EST sequence 734 -strand 491 n (File: SGN-E205046-) 1 AAGTGAACCA GGACATTCAC CATTTATATT AGCCGTACAA TGAATTGCAT GGCATTTCCC 61 TCCACTAGGA TTGGTCGGGG CGAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT 121 GTCCCAGAAA TCTAGGTTGC TAAACTGGTC CAAGGCGTAC TCGGCCAGGG TGTTTGGTGG 181 TTTGCCCCAC CCGGTACATT GCAAGACCCC ACCACAATCA CCAGTCTGAC ATGAACCTCT 241 ACCAGCACCA TCAAAGTTGC AATTCGTACG ACCCCATATA CGTGCCATCT TAGTGCCCCT 301 CGGTGCATTG ATGACCCATG TTTGGCCTCG ATCAAGACGT CGACCACCGC CTATTGGGGT 361 CGACGCCGCC CAGACGGTGT ATGGACAGTT GTTGCGTACC TCGAAAGTGG CAGCATAAGT 421 GTAAGTCACA AAAGCAAGAA GGAAGAAAAC AACAGAAGAT CTCAAGTAGG CCATGTTTGT 481 GGAACTATTT T Predicted gene structure (within gDNA segment 12606 to 16277): Exon 1 13954 14437 ( 484 n); cDNA 1 484 ( 484 n); score: 0.897 MATCH C08HBa0235H18.1+ SGN-E205046- 0.897 484 0.986 C PGS_C08HBa0235H18.1+_SGN-E205046- (13954 14437) Alignment (genomic DNA sequence = upper lines): AAGGGCGCGA GGACATTCAC CATTTATATT GGCCGTGCAA TGAATTGCGT GACATTTTCC 14013 ||| | | | |||||||||| |||||||||| ||||| ||| |||||||| | | ||||| || AAGTGAACCA GGACATTCAC CATTTATATT AGCCGTACAA TGAATTGCAT GGCATTTCCC 60 TCCACTAGGT TTTGTTGGGG CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT 14073 ||||||||| || || |||| | |||||||| |||||||||| |||||||||| |||||||||| TCCACTAGGA TTGGTCGGGG CGAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT 120 GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG 14133 |||||| ||| |||| ||||| |||||||||| |||||||||| ||||| |||| ||||||| || GTCCCAGAAA TCTAGGTTGC TAAACTGGTC CAAGGCGTAC TCGGCCAGGG TGTTTGGTGG 180 TTTGCCCCAT CCGGTACACT GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT 14193 ||||||||| |||||||| | | ||||| || |||||||||| |||||||||| ||| |||||| TTTGCCCCAC CCGGTACATT GCAAGACCCC ACCACAATCA CCAGTCTGAC ATGAACCTCT 240 GCCTGCAGCA TTAAAGTTGC AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT 14253 || ||| || | |||||||| || ||||| |||||||||| |||||||||| |||| ||||| ACCAGCACCA TCAAAGTTGC AATTCGTACG ACCCCATATA CGTGCCATCT TAGTGCCCCT 300 CGGAGCATTG ATGACCCATG TTTGGCCTCG ATTGAGACGT CGACCACCGC CTATCGGAGT 14313 ||| |||||| |||||||||| |||||||||| || |||||| |||||||||| |||| || || CGGTGCATTG ATGACCCATG TTTGGCCTCG ATCAAGACGT CGACCACCGC CTATTGGGGT 360 CGATGCCGCC CAAACGGTGT ATGGACAGTT GTTGCGTACC TCAATAGTGG CAGCATAAGT 14373 ||| |||||| || ||||||| |||||||||| |||||||||| || | ||||| |||||||||| CGACGCCGCC CAGACGGTGT ATGGACAGTT GTTGCGTACC TCGAAAGTGG CAGCATAAGT 420 ATAAGTCACA CAAAGAAGGA AGAAGAGAAC AAAAGAAGAT GTCAAGTAGC CCATGTTTGT 14433 ||||||||| || ||| | ||||| ||| || ||||||| |||||||| |||||||||| GTAAGTCACA AAAGCAAGAA GGAAGAAAAC AACAGAAGAT CTCAAGTAGG CCATGTTTGT 480 TGAA 14437 ||| GGAA 484 hqPGS_C08HBa0235H18.1+_SGN-E205046- (13954 14437) ******************************************************************************** EST sequence 819 -strand 477 n (File: SGN-E202164-) 1 AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 61 CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 121 TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT 181 TTGCCCCATC CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG 241 CCTGCAGCAT TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC 301 GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC 361 GATGCCGCCC AAACGGTGTA TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA 421 TAAGTCACAC AAAGAAGGAA GAAGAGAACA AAAGAAGATG TCAAGTAGCC CATGTTT Predicted gene structure (within gDNA segment 13345 to 15031): Exon 1 13955 14431 ( 477 n); cDNA 1 477 ( 477 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E202164- 1.000 477 1.000 C PGS_C08HBa0235H18.1+_SGN-E202164- (13955 14431) Alignment (genomic DNA sequence = upper lines): AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 14014 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 60 CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 14074 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 120 TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT 14134 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT 180 TTGCCCCATC CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG 14194 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCCCCATC CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG 240 CCTGCAGCAT TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC 14254 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTGCAGCAT TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC 300 GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC 14314 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC 360 GATGCCGCCC AAACGGTGTA TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA 14374 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGCCGCCC AAACGGTGTA TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA 420 TAAGTCACAC AAAGAAGGAA GAAGAGAACA AAAGAAGATG TCAAGTAGCC CATGTTT 14431 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| TAAGTCACAC AAAGAAGGAA GAAGAGAACA AAAGAAGATG TCAAGTAGCC CATGTTT 477 hqPGS_C08HBa0235H18.1+_SGN-E202164- (13955 14431) ******************************************************************************** EST sequence 608 -strand 463 n (File: SGN-E264072-) 1 AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 61 CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 121 TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT 181 TTGCCCCATC CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG 241 CCTGCAGCAT TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC 301 GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC 361 GATGCCGCCC AAACGGTGTA TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA 421 TAAGTCACAC AAAGAAGGAA GAAGAGAACA AAAGAAGATG TCA Predicted gene structure (within gDNA segment 13345 to 15017): Exon 1 13955 14417 ( 463 n); cDNA 1 463 ( 463 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E264072- 1.000 463 1.000 C PGS_C08HBa0235H18.1+_SGN-E264072- (13955 14417) Alignment (genomic DNA sequence = upper lines): AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 14014 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 60 CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 14074 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 120 TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT 14134 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT 180 TTGCCCCATC CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG 14194 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCCCCATC CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG 240 CCTGCAGCAT TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC 14254 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTGCAGCAT TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC 300 GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC 14314 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC 360 GATGCCGCCC AAACGGTGTA TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA 14374 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGCCGCCC AAACGGTGTA TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA 420 TAAGTCACAC AAAGAAGGAA GAAGAGAACA AAAGAAGATG TCA 14417 |||||||||| |||||||||| |||||||||| |||||||||| ||| TAAGTCACAC AAAGAAGGAA GAAGAGAACA AAAGAAGATG TCA 463 hqPGS_C08HBa0235H18.1+_SGN-E264072- (13955 14417) ******************************************************************************** EST sequence 549 -strand 477 n (File: SGN-E202521-) 1 GACATTCACC ATTTATATTA GCCGTACAAT GAATTGCATG GCATTTCCCT CCACTAGGAT 61 TGGTCGGGGC GAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAGAAAT 121 CTAGGTTGCT AAACTGGTCC AAGGCGTACT CGGCCAGGGT GTTTGGTGGT TTGCCCCACC 181 CGGTACATTG CAAGACCCCA CCACAATCAC CAGTCTGACA TGAACCTCTA CCAGCACCAT 241 CAAAGTTGCA ATTCGTACGA CCCCATATAC GTGCCATCTT AGTGCCCCTC GGTGCATTGA 301 TGACCCATGT TTGGCCTCGA TCAAGACGTC GACCACCGCC TATTGGGGTC GACGCCGCCC 361 AGACGGTGTA TGGACAGTTG TTGCGTACCT CGAAAGTGGC AGCATAAGTG TAAGTCACAA 421 AAGCAAGAAG GAAGAAAACA AAAGAAGATC TCAAGTAGGC CATGTTTGTG GAACTAT Predicted gene structure (within gDNA segment 12716 to 16247): Exon 1 13965 14437 ( 473 n); cDNA 1 473 ( 473 n); score: 0.905 MATCH C08HBa0235H18.1+ SGN-E202521- 0.905 473 0.992 C PGS_C08HBa0235H18.1+_SGN-E202521- (13965 14437) Alignment (genomic DNA sequence = upper lines): GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT 14024 |||||||||| ||||||||| ||||| |||| ||||||| || ||||| ||| |||||||| | GACATTCACC ATTTATATTA GCCGTACAAT GAATTGCATG GCATTTCCCT CCACTAGGAT 60 TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT 14084 | || ||||| ||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| TGGTCGGGGC GAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAGAAAT 120 CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC 14144 ||| |||||| |||||||||| |||||||||| |||| ||||| |||||| ||| |||||||| | CTAGGTTGCT AAACTGGTCC AAGGCGTACT CGGCCAGGGT GTTTGGTGGT TTGCCCCACC 180 CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT 14204 ||||||| || ||||| ||| |||||||||| |||||||||| || |||||| || ||| ||| CGGTACATTG CAAGACCCCA CCACAATCAC CAGTCTGACA TGAACCTCTA CCAGCACCAT 240 TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA 14264 ||||||||| | |||||| |||||||||| |||||||||| ||| |||||| || ||||||| CAAAGTTGCA ATTCGTACGA CCCCATATAC GTGCCATCTT AGTGCCCCTC GGTGCATTGA 300 TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC 14324 |||||||||| |||||||||| | ||||||| |||||||||| ||| || ||| || ||||||| TGACCCATGT TTGGCCTCGA TCAAGACGTC GACCACCGCC TATTGGGGTC GACGCCGCCC 360 AAACGGTGTA TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC 14384 | |||||||| |||||||||| |||||||||| | | |||||| ||||||||| ||||||||| AGACGGTGTA TGGACAGTTG TTGCGTACCT CGAAAGTGGC AGCATAAGTG TAAGTCACAA 420 AAAGAAGGAA GAAGAGAACA AAAGAAGATG TCAAGTAGCC CATGTTTGTT GAA 14437 || ||| | ||||| |||| ||||||||| |||||||| | ||||||||| ||| AAGCAAGAAG GAAGAAAACA AAAGAAGATC TCAAGTAGGC CATGTTTGTG GAA 473 hqPGS_C08HBa0235H18.1+_SGN-E202521- (13965 14437) ******************************************************************************** EST sequence 836 -strand 447 n (File: SGN-E203940-) 1 ACATTCACCA TTTATATTGA CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT 61 TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC 121 TAAGTTGCTA AACTGGTCCA AGGTGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC 181 GGTACACTGT AAGACTCCAC CGCAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 241 AAAGTTGCAT CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT 301 GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA 361 AACGGTGTAT GGACAGTTGT TGCGTACTTC AATAGTGGCA GCATAAGTAT AAGTCACACA 421 AACAAGGAAG AAGAGAGCAA AAGAAGA Predicted gene structure (within gDNA segment 13356 to 15237): Exon 1 13966 14412 ( 447 n); cDNA 1 447 ( 447 n); score: 0.984 MATCH C08HBa0235H18.1+ SGN-E203940- 0.984 447 1.000 C PGS_C08HBa0235H18.1+_SGN-E203940- (13966 14412) Alignment (genomic DNA sequence = upper lines): ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT 14025 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATTCACCA TTTATATTGA CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT 60 TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC 14085 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC 120 TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC 14145 |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| TAAGTTGCTA AACTGGTCCA AGGTGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC 180 GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 14205 |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| GGTACACTGT AAGACTCCAC CGCAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 240 AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT 14265 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGTTGCAT CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT 300 GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA 14325 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA 360 AACGGTGTAT GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAAGTAT AAGTCACACA 14385 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| AACGGTGTAT GGACAGTTGT TGCGTACTTC AATAGTGGCA GCATAAGTAT AAGTCACACA 420 AAGAAGGAAG AAGAGAACAA AAGAAGA 14412 || ||||||| |||||| ||| ||||||| AACAAGGAAG AAGAGAGCAA AAGAAGA 447 hqPGS_C08HBa0235H18.1+_SGN-E203940- (13966 14412) ******************************************************************************** EST sequence 706 -strand 421 n (File: SGN-E205056-) 1 CATTTATATT GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG 61 CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC 121 TAAACTGGTC CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT 181 GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC 241 AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG 301 TTTGGCCTCG ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT 361 ATGGACAGTT GTTGCGTACC TCAATAGTGG CAGCATAAGT ATAAGTCACA CAAAGAAGGA 421 A Predicted gene structure (within gDNA segment 13364 to 14994): Exon 1 13974 14394 ( 421 n); cDNA 1 421 ( 421 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E205056- 1.000 421 1.000 C PGS_C08HBa0235H18.1+_SGN-E205056- (13974 14394) Alignment (genomic DNA sequence = upper lines): CATTTATATT GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG 14033 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTTATATT GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG 60 CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC 14093 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC 120 TAAACTGGTC CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT 14153 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAACTGGTC CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT 180 GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC 14213 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC 240 AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG 14273 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG 300 TTTGGCCTCG ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT 14333 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGGCCTCG ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT 360 ATGGACAGTT GTTGCGTACC TCAATAGTGG CAGCATAAGT ATAAGTCACA CAAAGAAGGA 14393 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGACAGTT GTTGCGTACC TCAATAGTGG CAGCATAAGT ATAAGTCACA CAAAGAAGGA 420 A 14394 | A 421 hqPGS_C08HBa0235H18.1+_SGN-E205056- (13974 14394) ******************************************************************************** EST sequence 956 -strand 389 n (File: SGN-E207079-) 1 CATTTATATT GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG 61 CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC 121 TAAACTGGTC CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT 181 GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC 241 AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG 301 TTTGGCCTCG ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT 361 ATGGACAGTT GTTGCGTACC TCAATAGTG Predicted gene structure (within gDNA segment 13364 to 14962): Exon 1 13974 14362 ( 389 n); cDNA 1 389 ( 389 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E207079- 1.000 389 1.000 C PGS_C08HBa0235H18.1+_SGN-E207079- (13974 14362) Alignment (genomic DNA sequence = upper lines): CATTTATATT GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG 14033 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTTATATT GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG 60 CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC 14093 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC 120 TAAACTGGTC CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT 14153 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAACTGGTC CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT 180 GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC 14213 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC 240 AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG 14273 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG 300 TTTGGCCTCG ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT 14333 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGGCCTCG ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT 360 ATGGACAGTT GTTGCGTACC TCAATAGTG 14362 |||||||||| |||||||||| ||||||||| ATGGACAGTT GTTGCGTACC TCAATAGTG 389 hqPGS_C08HBa0235H18.1+_SGN-E207079- (13974 14362) ******************************************************************************** EST sequence 1027 -strand 467 n (File: SGN-E208115-) 1 ATTTATATTA GCCGTACAAT GAATTGCATG GCATTTCCCT CCACTAGGAT TGGTCGGGGC 61 GAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAGAAAT CTAGGTTGCT 121 AAACTGGTCC AAGGCGTACT CGGCCAGGGT GTTTGGTGGT TTGCCCCACC CGGTACATTG 181 CAAGACCCCA CCACAATCAC CAGTCTGACA TGAACCTCTA CCAGCACCAT CAAAGTTGCA 241 ATTCGTACGA CCCCATATAC GTGCCATCTT AGTGCCCCTC GGTGCATTGA TGACCCATGT 301 TTGGCCTCGA TCAAGACGTC GACCACCGCC TATTGGGGTC GACGCCGCCC AGACGGTGTA 361 TGGACAGTTG TTGCGTACCT CGAAAGTGGC AGCATAAGTG TAAGTCACAA AAGCAAGAAG 421 GAAGAAAACA AAAGAAGATC TCAAGTAGGC CATGTTTGTG GAACTAT Predicted gene structure (within gDNA segment 12816 to 16247): Exon 1 13975 14437 ( 463 n); cDNA 1 463 ( 463 n); score: 0.903 MATCH C08HBa0235H18.1+ SGN-E208115- 0.903 463 0.991 C PGS_C08HBa0235H18.1+_SGN-E208115- (13975 14437) Alignment (genomic DNA sequence = upper lines): ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 14034 ||||||||| ||||| |||| ||||||| || ||||| ||| |||||||| | | || ||||| ATTTATATTA GCCGTACAAT GAATTGCATG GCATTTCCCT CCACTAGGAT TGGTCGGGGC 60 AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 14094 ||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| ||| |||||| GAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAGAAAT CTAGGTTGCT 120 AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 14154 |||||||||| |||||||||| |||| ||||| |||||| ||| |||||||| | ||||||| || AAACTGGTCC AAGGCGTACT CGGCCAGGGT GTTTGGTGGT TTGCCCCACC CGGTACATTG 180 TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 14214 ||||| ||| |||||||||| |||||||||| || |||||| || ||| ||| ||||||||| CAAGACCCCA CCACAATCAC CAGTCTGACA TGAACCTCTA CCAGCACCAT CAAAGTTGCA 240 ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 14274 | |||||| |||||||||| |||||||||| ||| |||||| || ||||||| |||||||||| ATTCGTACGA CCCCATATAC GTGCCATCTT AGTGCCCCTC GGTGCATTGA TGACCCATGT 300 TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA 14334 |||||||||| | ||||||| |||||||||| ||| || ||| || ||||||| | |||||||| TTGGCCTCGA TCAAGACGTC GACCACCGCC TATTGGGGTC GACGCCGCCC AGACGGTGTA 360 TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA 14394 |||||||||| |||||||||| | | |||||| ||||||||| ||||||||| || ||| | TGGACAGTTG TTGCGTACCT CGAAAGTGGC AGCATAAGTG TAAGTCACAA AAGCAAGAAG 420 GAAGAGAACA AAAGAAGATG TCAAGTAGCC CATGTTTGTT GAA 14437 ||||| |||| ||||||||| |||||||| | ||||||||| ||| GAAGAAAACA AAAGAAGATC TCAAGTAGGC CATGTTTGTG GAA 463 hqPGS_C08HBa0235H18.1+_SGN-E208115- (13975 14437) ******************************************************************************** EST sequence 720 -strand 457 n (File: SGN-E205100-) 1 ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 61 AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 121 AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 181 TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 241 ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 301 TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA 361 TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA 421 GAAGAGAACA AAAGAAGATG TCAAGTAGCC CATGTTT Predicted gene structure (within gDNA segment 13365 to 15031): Exon 1 13975 14431 ( 457 n); cDNA 1 457 ( 457 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E205100- 1.000 457 1.000 C PGS_C08HBa0235H18.1+_SGN-E205100- (13975 14431) Alignment (genomic DNA sequence = upper lines): ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 14034 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 60 AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 14094 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 120 AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 14154 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 180 TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 14214 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 240 ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 14274 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 300 TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA 14334 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA 360 TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA 14394 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA 420 GAAGAGAACA AAAGAAGATG TCAAGTAGCC CATGTTT 14431 |||||||||| |||||||||| |||||||||| ||||||| GAAGAGAACA AAAGAAGATG TCAAGTAGCC CATGTTT 457 hqPGS_C08HBa0235H18.1+_SGN-E205100- (13975 14431) ******************************************************************************** EST sequence 1075 -strand 444 n (File: SGN-E208277-) 1 GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 61 ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 121 GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 181 CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 241 CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 301 AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG 361 CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA 421 GAAGATGTCA AGTAGCCCAT GTTT Predicted gene structure (within gDNA segment 13378 to 15031): Exon 1 13988 14431 ( 444 n); cDNA 1 444 ( 444 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E208277- 1.000 444 1.000 C PGS_C08HBa0235H18.1+_SGN-E208277- (13988 14431) Alignment (genomic DNA sequence = upper lines): GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 14047 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 60 ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 14107 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 120 GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 14167 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 180 CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 14227 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 240 CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 14287 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 300 AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG 14347 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG 360 CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA 14407 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA 420 GAAGATGTCA AGTAGCCCAT GTTT 14431 |||||||||| |||||||||| |||| GAAGATGTCA AGTAGCCCAT GTTT 444 hqPGS_C08HBa0235H18.1+_SGN-E208277- (13988 14431) ******************************************************************************** EST sequence 1023 -strand 425 n (File: SGN-E276456-) 1 GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 61 ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 121 GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 181 CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 241 CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 301 AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG 361 CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA 421 GAAGA Predicted gene structure (within gDNA segment 13378 to 15012): Exon 1 13988 14412 ( 425 n); cDNA 1 425 ( 425 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E276456- 1.000 425 1.000 C PGS_C08HBa0235H18.1+_SGN-E276456- (13988 14412) Alignment (genomic DNA sequence = upper lines): GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 14047 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 60 ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 14107 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 120 GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 14167 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 180 CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 14227 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 240 CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 14287 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 300 AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG 14347 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG 360 CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA 14407 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA 420 GAAGA 14412 ||||| GAAGA 425 hqPGS_C08HBa0235H18.1+_SGN-E276456- (13988 14412) ******************************************************************************** EST sequence 1231 -strand 445 n (File: SGN-E200871-) 1 TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 61 TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 121 CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 181 AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 241 ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 301 GACGTCGACC ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC 361 GTACCTCAAT AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG 421 AAGATGTCAA GTAGCCCATG TTTGT Predicted gene structure (within gDNA segment 13379 to 15033): Exon 1 13989 14433 ( 445 n); cDNA 1 445 ( 445 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E200871- 1.000 445 1.000 C PGS_C08HBa0235H18.1+_SGN-E200871- (13989 14433) Alignment (genomic DNA sequence = upper lines): TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 14048 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 60 TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 14108 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 120 CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 14168 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 180 AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 14228 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 240 ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 14288 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 300 GACGTCGACC ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC 14348 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACGTCGACC ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC 360 GTACCTCAAT AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG 14408 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTACCTCAAT AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG 420 AAGATGTCAA GTAGCCCATG TTTGT 14433 |||||||||| |||||||||| ||||| AAGATGTCAA GTAGCCCATG TTTGT 445 hqPGS_C08HBa0235H18.1+_SGN-E200871- (13989 14433) ******************************************************************************** EST sequence 867 -strand 433 n (File: SGN-E200039-) 1 TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 61 TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 121 CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 181 AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 241 ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 301 GACGTCGACC ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC 361 GTACCTCAAT AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG 421 AAGATGTCAA GTA Predicted gene structure (within gDNA segment 13379 to 15021): Exon 1 13989 14421 ( 433 n); cDNA 1 433 ( 433 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E200039- 1.000 433 1.000 C PGS_C08HBa0235H18.1+_SGN-E200039- (13989 14421) Alignment (genomic DNA sequence = upper lines): TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 14048 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 60 TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 14108 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 120 CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 14168 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 180 AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 14228 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 240 ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 14288 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 300 GACGTCGACC ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC 14348 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACGTCGACC ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC 360 GTACCTCAAT AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG 14408 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTACCTCAAT AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG 420 AAGATGTCAA GTA 14421 |||||||||| ||| AAGATGTCAA GTA 433 hqPGS_C08HBa0235H18.1+_SGN-E200039- (13989 14421) ******************************************************************************** EST sequence 1054 -strand 429 n (File: SGN-E210426-) 1 TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 61 TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 121 CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 181 AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 241 ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 301 GACGTCGACC ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC 361 GTACCTCAAT AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG 421 AAGATGTCA Predicted gene structure (within gDNA segment 13379 to 15017): Exon 1 13989 14417 ( 429 n); cDNA 1 429 ( 429 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E210426- 1.000 429 1.000 C PGS_C08HBa0235H18.1+_SGN-E210426- (13989 14417) Alignment (genomic DNA sequence = upper lines): TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 14048 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 60 TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 14108 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 120 CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 14168 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 180 AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 14228 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 240 ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 14288 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 300 GACGTCGACC ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC 14348 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACGTCGACC ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC 360 GTACCTCAAT AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG 14408 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTACCTCAAT AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG 420 AAGATGTCA 14417 ||||||||| AAGATGTCA 429 hqPGS_C08HBa0235H18.1+_SGN-E210426- (13989 14417) ******************************************************************************** EST sequence 638 -strand 419 n (File: SGN-E338892-) 1 TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 61 TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 121 CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 181 AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 241 ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 301 GACGTCGACC ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC 361 GTACCTCAAT AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAA Predicted gene structure (within gDNA segment 13379 to 15007): Exon 1 13989 14407 ( 419 n); cDNA 1 419 ( 419 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E338892- 1.000 419 1.000 C PGS_C08HBa0235H18.1+_SGN-E338892- (13989 14407) Alignment (genomic DNA sequence = upper lines): TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 14048 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 60 TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 14108 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 120 CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 14168 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 180 AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 14228 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 240 ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 14288 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 300 GACGTCGACC ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC 14348 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACGTCGACC ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC 360 GTACCTCAAT AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAA 14407 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| GTACCTCAAT AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAA 419 hqPGS_C08HBa0235H18.1+_SGN-E338892- (13989 14407) ******************************************************************************** EST sequence 911 -strand 426 n (File: SGN-E256174-) 1 AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT 61 TAAATCCATC GACTAAAGAA ATGTCCCAAA AATATAAGTT GCTAAACTGG TCCAAGGCGT 121 ACTCGGCTAG GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT 181 CACCAGTCTG ACATGTACCT CTGCATGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA 241 TACGTGCCAT CTTAGTTCCC CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC 301 GTCGACCACC GCCTATCGGA GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA 361 CCTCAATAGT GGCAGCATAA GTATAAGTCA CACAAAGAAG GAAGAAGAGA ACAAAAGAAG 421 ATGTCA Predicted gene structure (within gDNA segment 13382 to 15017): Exon 1 13992 14417 ( 426 n); cDNA 1 426 ( 426 n); score: 0.995 MATCH C08HBa0235H18.1+ SGN-E256174- 0.995 426 1.000 C PGS_C08HBa0235H18.1+_SGN-E256174- (13992 14417) Alignment (genomic DNA sequence = upper lines): AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT 14051 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT 60 TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT 14111 |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| TAAATCCATC GACTAAAGAA ATGTCCCAAA AATATAAGTT GCTAAACTGG TCCAAGGCGT 120 ACTCGGCTAG GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT 14171 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTCGGCTAG GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT 180 CACCAGTCTG ACATGTACCT CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA 14231 |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| CACCAGTCTG ACATGTACCT CTGCATGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA 240 TACGTGCCAT CTTAGTTCCC CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC 14291 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACGTGCCAT CTTAGTTCCC CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC 300 GTCGACCACC GCCTATCGGA GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA 14351 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCGACCACC GCCTATCGGA GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA 360 CCTCAATAGT GGCAGCATAA GTATAAGTCA CACAAAGAAG GAAGAAGAGA ACAAAAGAAG 14411 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCAATAGT GGCAGCATAA GTATAAGTCA CACAAAGAAG GAAGAAGAGA ACAAAAGAAG 420 ATGTCA 14417 |||||| ATGTCA 426 hqPGS_C08HBa0235H18.1+_SGN-E256174- (13992 14417) ******************************************************************************** EST sequence 1167 -strand 410 n (File: SGN-E208827-) 1 AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT 61 TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT 121 ACTCGGCTAG GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT 181 CACCAGTCTG ACATGTACCT CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA 241 TACGTGCCAT CTTAGTTCCC CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC 301 GTCGACCACC GCCTATCGGA GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA 361 CCTCAATAGT GGCAGCATAA GTATAAGTCA CACAAAGAAG GAAGAAGAGA Predicted gene structure (within gDNA segment 13382 to 15019): Exon 1 13992 14401 ( 410 n); cDNA 1 410 ( 410 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E208827- 1.000 410 1.000 C PGS_C08HBa0235H18.1+_SGN-E208827- (13992 14401) Alignment (genomic DNA sequence = upper lines): AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT 14051 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT 60 TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT 14111 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT 120 ACTCGGCTAG GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT 14171 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTCGGCTAG GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT 180 CACCAGTCTG ACATGTACCT CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA 14231 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCAGTCTG ACATGTACCT CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA 240 TACGTGCCAT CTTAGTTCCC CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC 14291 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACGTGCCAT CTTAGTTCCC CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC 300 GTCGACCACC GCCTATCGGA GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA 14351 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCGACCACC GCCTATCGGA GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA 360 CCTCAATAGT GGCAGCATAA GTATAAGTCA CACAAAGAAG GAAGAAGAGA 14401 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCAATAGT GGCAGCATAA GTATAAGTCA CACAAAGAAG GAAGAAGAGA 410 hqPGS_C08HBa0235H18.1+_SGN-E208827- (13992 14401) ******************************************************************************** EST sequence 989 -strand 431 n (File: SGN-E207769-) 1 CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT 61 CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA 121 GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTGT 181 GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA 241 TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC 301 CGCCTATCGG AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG 361 TGGCAGCATA AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT 421 AGCCCATGTT T Predicted gene structure (within gDNA segment 13391 to 15031): Exon 1 14001 14431 ( 431 n); cDNA 1 431 ( 431 n); score: 0.998 MATCH C08HBa0235H18.1+ SGN-E207769- 0.998 431 1.000 C PGS_C08HBa0235H18.1+_SGN-E207769- (14001 14431) Alignment (genomic DNA sequence = upper lines): CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT 14060 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT 60 CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA 14120 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA 120 GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT 14180 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTGT 180 GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA 14240 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA 240 TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC 14300 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC 300 CGCCTATCGG AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG 14360 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCCTATCGG AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG 360 TGGCAGCATA AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT 14420 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGCAGCATA AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT 420 AGCCCATGTT T 14431 |||||||||| | AGCCCATGTT T 431 hqPGS_C08HBa0235H18.1+_SGN-E207769- (14001 14431) ******************************************************************************** EST sequence 1150 -strand 418 n (File: SGN-E201442-) 1 CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT 61 CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA 121 GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT 181 GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA 241 TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC 301 CGCCTATCGG AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG 361 TGGCAGCATA AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAA Predicted gene structure (within gDNA segment 13391 to 15018): Exon 1 14001 14418 ( 418 n); cDNA 1 418 ( 418 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E201442- 1.000 418 1.000 C PGS_C08HBa0235H18.1+_SGN-E201442- (14001 14418) Alignment (genomic DNA sequence = upper lines): CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT 14060 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT 60 CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA 14120 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA 120 GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT 14180 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT 180 GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA 14240 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA 240 TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC 14300 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC 300 CGCCTATCGG AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG 14360 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCCTATCGG AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG 360 TGGCAGCATA AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAA 14418 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| TGGCAGCATA AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAA 418 hqPGS_C08HBa0235H18.1+_SGN-E201442- (14001 14418) ******************************************************************************** EST sequence 823 -strand 413 n (File: SGN-E336913-) 1 GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC 61 GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG 121 GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG 181 ACATGTACCT CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT 241 CTTAGTTCCC CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC 301 GCCTATCGGA GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT 361 GGCAGCATAA GTATAAGTCA CACAAAGAAG GAAGAAGAGA ACAAAAGAAG CCT Predicted gene structure (within gDNA segment 13392 to 15041): Exon 1 14002 14411 ( 410 n); cDNA 1 410 ( 410 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E336913- 1.000 410 0.993 C PGS_C08HBa0235H18.1+_SGN-E336913- (14002 14411) Alignment (genomic DNA sequence = upper lines): GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC 14061 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC 60 GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG 14121 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG 120 GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG 14181 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG 180 ACATGTACCT CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT 14241 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATGTACCT CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT 240 CTTAGTTCCC CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC 14301 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTAGTTCCC CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC 300 GCCTATCGGA GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT 14361 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCTATCGGA GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT 360 GGCAGCATAA GTATAAGTCA CACAAAGAAG GAAGAAGAGA ACAAAAGAAG 14411 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCAGCATAA GTATAAGTCA CACAAAGAAG GAAGAAGAGA ACAAAAGAAG 410 hqPGS_C08HBa0235H18.1+_SGN-E336913- (14002 14411) ******************************************************************************** EST sequence 887 -strand 335 n (File: SGN-E200631-) 1 AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA 61 AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC 121 CCATCCGGTA CACTGTAAGA CTCCACCCAA TCACCAGTCT GACATGTACC TCTGCCTGCA 181 GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TTTAGTTCCC CTCGGAGCAT 241 TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCCCG CCTATCGAGT GATGCCGCCC 301 AACGGTGTAT GGACAGTTGT TGGTACTCAA TAGTG Predicted gene structure (within gDNA segment 13410 to 15478): Exon 1 14020 14362 ( 343 n); cDNA 1 335 ( 335 n); score: 0.977 MATCH C08HBa0235H18.1+ SGN-E200631- 0.977 343 1.024 C PGS_C08HBa0235H18.1+_SGN-E200631- (14020 14362) Alignment (genomic DNA sequence = upper lines): AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA 14079 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA 60 AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC 14139 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC 120 CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC 14199 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| CCATCCGGTA CACTGTAAGA CTCCACC-CA ATCACCAGTC TGACATGTAC CTCTGCCTGC 179 AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC 14259 |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC AT-TTAGTTC CCCTCGGAGC 238 ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC 14319 |||||||||| |||||||||| |||||||||| ||||||||| ||||||||| |||| ||||| ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACC- CCGCCTATC- GAGT-GATGC 295 CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTG 14362 ||||| |||| |||||||||| |||||||| | || ||||||| ||| CGCCC-AACG GTGTATGGAC AGTTGTTG-G TA-CTCAATA GTG 335 hqPGS_C08HBa0235H18.1+_SGN-E200631- (14020 14362) ******************************************************************************** EST sequence 710 -strand 395 n (File: SGN-E204939-) 1 TTTGTTGGGG CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA 61 TCTAAGTTGC TAAACTGGTC CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT 121 CCGGTACACT GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA 181 TTAAAGTTGC AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG 241 ATGACCCATG TTTGGCCTCG ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC 301 CAAACGGTGT ATGGACAGTT GTTGCGTACC TCAATAGTGG CAGCATAAGT ATAAGTCACA 361 CAAAGAAGGA AGAAGAGAAC AAAAGAAGAT GTCAA Predicted gene structure (within gDNA segment 13414 to 15018): Exon 1 14024 14418 ( 395 n); cDNA 1 395 ( 395 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E204939- 1.000 395 1.000 C PGS_C08HBa0235H18.1+_SGN-E204939- (14024 14418) Alignment (genomic DNA sequence = upper lines): TTTGTTGGGG CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA 14083 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGTTGGGG CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA 60 TCTAAGTTGC TAAACTGGTC CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT 14143 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTAAGTTGC TAAACTGGTC CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT 120 CCGGTACACT GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA 14203 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGGTACACT GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA 180 TTAAAGTTGC AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG 14263 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAAAGTTGC AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG 240 ATGACCCATG TTTGGCCTCG ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC 14323 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGACCCATG TTTGGCCTCG ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC 300 CAAACGGTGT ATGGACAGTT GTTGCGTACC TCAATAGTGG CAGCATAAGT ATAAGTCACA 14383 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAACGGTGT ATGGACAGTT GTTGCGTACC TCAATAGTGG CAGCATAAGT ATAAGTCACA 360 CAAAGAAGGA AGAAGAGAAC AAAAGAAGAT GTCAA 14418 |||||||||| |||||||||| |||||||||| ||||| CAAAGAAGGA AGAAGAGAAC AAAAGAAGAT GTCAA 395 hqPGS_C08HBa0235H18.1+_SGN-E204939- (14024 14418) ******************************************************************************** EST sequence 1138 -strand 390 n (File: SGN-E210135-) 1 TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT 61 ATAAGTTGCT AAGCTGGTCC AAGGCGTACT CGGTTAGGGT GTTTGGGGGT TTGCCCCATC 121 CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT 181 TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA 241 TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC 301 AAACGGTGTA TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC 361 AAAGAAGGAA GAAGAGAACA AAAGAAGATG Predicted gene structure (within gDNA segment 13415 to 15014): Exon 1 14025 14414 ( 390 n); cDNA 1 390 ( 390 n); score: 0.992 MATCH C08HBa0235H18.1+ SGN-E210135- 0.992 390 1.000 C PGS_C08HBa0235H18.1+_SGN-E210135- (14025 14414) Alignment (genomic DNA sequence = upper lines): TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT 14084 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT 60 CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC 14144 ||||||||| || ||||||| |||||||||| ||| |||||| |||||||||| |||||||||| ATAAGTTGCT AAGCTGGTCC AAGGCGTACT CGGTTAGGGT GTTTGGGGGT TTGCCCCATC 120 CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT 14204 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT 180 TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA 14264 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA 240 TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC 14324 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC 300 AAACGGTGTA TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC 14384 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACGGTGTA TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC 360 AAAGAAGGAA GAAGAGAACA AAAGAAGATG 14414 |||||||||| |||||||||| |||||||||| AAAGAAGGAA GAAGAGAACA AAAGAAGATG 390 hqPGS_C08HBa0235H18.1+_SGN-E210135- (14025 14414) ******************************************************************************** EST sequence 742 -strand 349 n (File: SGN-E278209-) 1 CGGGGCGAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC AGAAATCTAG 61 GTTGCTAAAC TGGTCCAAGG CGTACTCGGC CAGGGTGTTT GGTGGTTTGC CCCACCCGGT 121 ACATTGCAAG ACCCCCCCCA CAATCACCAG TCTGACATGA ACCTCTACCA GCACCATCAA 181 AGTTGCAATT CGTACGACCC CATATACGTG CCATCTTAGT GCCCCTCGGT GCATTGATGA 241 CCCATGTTTG GCCTCGATCA AGACGTCGAC CACCGCCTAT TGGGGTCGAC GCCGCCCAGA 301 CGGTGTATGG ACAGTTGTTG CGTACCTCGA AAGTGGCAGC ATAAGTGTA Predicted gene structure (within gDNA segment 13356 to 15597): Exon 1 14030 14376 ( 347 n); cDNA 2 349 ( 348 n); score: 0.909 MATCH C08HBa0235H18.1+ SGN-E278209- 0.909 347 0.994 C PGS_C08HBa0235H18.1+_SGN-E278209- (14030 14376) Alignment (genomic DNA sequence = upper lines): GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG 14089 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| | GGGGCGAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA GAAATCTAGG 61 TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA 14149 |||||||||| |||||||||| ||||||||| |||||||||| | |||||||| ||| |||||| TTGCTAAACT GGTCCAAGGC GTACTCGGCC AGGGTGTTTG GTGGTTTGCC CCACCCGGTA 121 CACTGTAAGA -CTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA 14208 || || |||| | || |||| |||||||||| |||||||| | ||||| || | || ||| ||| CATTGCAAGA CCCCCCCCAC AATCACCAGT CTGACATGAA CCTCTACCAG CACCATCAAA 181 GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC 14268 ||||||| |||||||||| |||||||||| ||||||||| |||||||| | |||||||||| GTTGCAATTC GTACGACCCC ATATACGTGC CATCTTAGTG CCCCTCGGTG CATTGATGAC 241 CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC GGAGTCGATG CCGCCCAAAC 14328 |||||||||| ||||||| | |||||||||| ||||||||| || ||||| | ||||||| || CCATGTTTGG CCTCGATCAA GACGTCGACC ACCGCCTATT GGGGTCGACG CCGCCCAGAC 301 GGTGTATGGA CAGTTGTTGC GTACCTCAAT AGTGGCAGCA TAAGTATA 14376 |||||||||| |||||||||| ||||||| | |||||||||| ||||| || GGTGTATGGA CAGTTGTTGC GTACCTCGAA AGTGGCAGCA TAAGTGTA 349 hqPGS_C08HBa0235H18.1+_SGN-E278209- (14030 14376) ******************************************************************************** EST sequence 1058 -strand 265 n (File: SGN-E210564-) 1 GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC 61 TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG 121 ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA 181 GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG 241 CCTCGATTGA GACGTCGACC ACCGC Predicted gene structure (within gDNA segment 13429 to 14903): Exon 1 14039 14303 ( 265 n); cDNA 1 265 ( 265 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E210564- 1.000 265 1.000 C PGS_C08HBa0235H18.1+_SGN-E210564- (14039 14303) Alignment (genomic DNA sequence = upper lines): GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC 14098 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC 60 TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG 14158 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG 120 ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA 14218 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA 180 GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG 14278 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG 240 CCTCGATTGA GACGTCGACC ACCGC 14303 |||||||||| |||||||||| ||||| CCTCGATTGA GACGTCGACC ACCGC 265 hqPGS_C08HBa0235H18.1+_SGN-E210564- (14039 14303) ******************************************************************************** EST sequence 612 -strand 379 n (File: SGN-E337746-) 1 ATATTAAATC CATCGACTAA AGAAATGTCC CAGAAATCTA GGTTGCTAAA CTGGTCCAAG 61 GCGTACTCGG CAAGGGTGTT TGGTGGTTTG CCCCACCCGG TACATTGCAA GACCCCACCA 121 CAATCACCAG TATGACATGA ACCTCTACCA GCACCATCAA AGTTGCAATT CGTACGACCC 181 CATATACGTG CCATCTTAGT GCCCCTCGGT GCATTGATGA CCCATGTTTG GCCTCGATCA 241 AGACGTCGAC CACCGCCTAT TGGGGTCGAC GCCGCCCAGA CGGTGTATGG ACAGTTGTTG 301 CGTACCTCGA AAGTGGCAGC ATAAGTGTAA GTCACAAAAG CAAGAAGGAA GAAAACAAAA 361 GAAGATCTCA AGTAGGCCA Predicted gene structure (within gDNA segment 13438 to 16097): Exon 1 14048 14426 ( 379 n); cDNA 1 379 ( 379 n); score: 0.905 MATCH C08HBa0235H18.1+ SGN-E337746- 0.905 379 1.000 C PGS_C08HBa0235H18.1+_SGN-E337746- (14048 14426) Alignment (genomic DNA sequence = upper lines): ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 14107 |||||||||| |||||||||| |||||||||| || ||||||| ||||||||| |||||||||| ATATTAAATC CATCGACTAA AGAAATGTCC CAGAAATCTA GGTTGCTAAA CTGGTCCAAG 60 GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 14167 |||||||||| | |||||||| ||| |||||| ||||| |||| |||| || || ||| |||||| GCGTACTCGG CAAGGGTGTT TGGTGGTTTG CCCCACCCGG TACATTGCAA GACCCCACCA 120 CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 14227 |||||||||| | ||||||| |||||| || ||| ||| || |||||||| ||||||||| CAATCACCAG TATGACATGA ACCTCTACCA GCACCATCAA AGTTGCAATT CGTACGACCC 180 CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 14287 |||||||||| |||||||||| |||||||| |||||||||| |||||||||| |||||||| CATATACGTG CCATCTTAGT GCCCCTCGGT GCATTGATGA CCCATGTTTG GCCTCGATCA 240 AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG 14347 |||||||||| |||||||||| || ||||| |||||||| | |||||||||| |||||||||| AGACGTCGAC CACCGCCTAT TGGGGTCGAC GCCGCCCAGA CGGTGTATGG ACAGTTGTTG 300 CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA 14407 |||||||| | ||||||||| |||||| ||| |||||| || ||| | ||| || ||||||| CGTACCTCGA AAGTGGCAGC ATAAGTGTAA GTCACAAAAG CAAGAAGGAA GAAAACAAAA 360 GAAGATGTCA AGTAGCCCA 14426 |||||| ||| ||||| ||| GAAGATCTCA AGTAGGCCA 379 hqPGS_C08HBa0235H18.1+_SGN-E337746- (14048 14426) ******************************************************************************** EST sequence 646 -strand 386 n (File: SGN-E338707-) 1 ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 61 GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 121 CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 181 CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 241 AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG 301 CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA 361 GAAGATGTCA AGTAGCCCTC GTGCCG Predicted gene structure (within gDNA segment 13438 to 15105): Exon 1 14048 14425 ( 378 n); cDNA 1 378 ( 378 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E338707- 1.000 378 0.979 C PGS_C08HBa0235H18.1+_SGN-E338707- (14048 14425) Alignment (genomic DNA sequence = upper lines): ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 14107 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 60 GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 14167 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 120 CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 14227 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 180 CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 14287 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 240 AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG 14347 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG 300 CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA 14407 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA 360 GAAGATGTCA AGTAGCCC 14425 |||||||||| |||||||| GAAGATGTCA AGTAGCCC 378 hqPGS_C08HBa0235H18.1+_SGN-E338707- (14048 14425) ******************************************************************************** EST sequence 812 -strand 358 n (File: SGN-E336810-) 1 ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC 61 GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA 121 ATCACCAGTC TGACATGTAC CTCTGCTTGC AGCATTAAAG TTGCAACCAG TACGACCCCA 181 TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG 241 ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG 301 TACCTCAATA GTGGCAGCAT AAGTATAAGT CACCCAAAGA AGGAAGAAGA GAACAAAA Predicted gene structure (within gDNA segment 13440 to 15007): Exon 1 14050 14407 ( 358 n); cDNA 1 358 ( 358 n); score: 0.994 MATCH C08HBa0235H18.1+ SGN-E336810- 0.994 358 1.000 C PGS_C08HBa0235H18.1+_SGN-E336810- (14050 14407) Alignment (genomic DNA sequence = upper lines): ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC 14109 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC 60 GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA 14169 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA 120 ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA 14229 |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| ATCACCAGTC TGACATGTAC CTCTGCTTGC AGCATTAAAG TTGCAACCAG TACGACCCCA 180 TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG 14289 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG 240 ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG 14349 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG 300 TACCTCAATA GTGGCAGCAT AAGTATAAGT CACACAAAGA AGGAAGAAGA GAACAAAA 14407 |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| |||||||| TACCTCAATA GTGGCAGCAT AAGTATAAGT CACCCAAAGA AGGAAGAAGA GAACAAAA 358 hqPGS_C08HBa0235H18.1+_SGN-E336810- (14050 14407) ******************************************************************************** EST sequence 905 -strand 362 n (File: SGN-E200826-) 1 TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA AACTGGTCCA AGGCGTACTC 61 GGCTAGGGTG TTTGGGGGTT TGCCCCATCC GGTACACTGT AAGACTCCAC CACAATCACC 121 AGTCTGACAT GTACCTCTGC CTGCAGCATT AAAGTTGCAA CCAGTACGAC CCCATATACG 181 TGCCATCTTA GTTCCCCTCG GAGCATTGAT GACCCATGTT TGGCCTCGAT TGAGACGTCG 241 ACCACCGCCT ATCGGAGTCG ATGCCGCCCA AACGGTGTAT GGACAGTTGT TGCGTACCTC 301 AATAGTGGCA GCATAAGTAT AAGTCACACA AAGAAGGAAG AAGAGAACAA AATAAGATGT 361 CA Predicted gene structure (within gDNA segment 13446 to 15107): Exon 1 14056 14417 ( 362 n); cDNA 1 362 ( 362 n); score: 0.997 MATCH C08HBa0235H18.1+ SGN-E200826- 0.997 362 1.000 C PGS_C08HBa0235H18.1+_SGN-E200826- (14056 14417) Alignment (genomic DNA sequence = upper lines): TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA AACTGGTCCA AGGCGTACTC 14115 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA AACTGGTCCA AGGCGTACTC 60 GGCTAGGGTG TTTGGGGGTT TGCCCCATCC GGTACACTGT AAGACTCCAC CACAATCACC 14175 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCTAGGGTG TTTGGGGGTT TGCCCCATCC GGTACACTGT AAGACTCCAC CACAATCACC 120 AGTCTGACAT GTACCTCTGC CTGCAGCATT AAAGTTGCAA CCAGTACGAC CCCATATACG 14235 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTCTGACAT GTACCTCTGC CTGCAGCATT AAAGTTGCAA CCAGTACGAC CCCATATACG 180 TGCCATCTTA GTTCCCCTCG GAGCATTGAT GACCCATGTT TGGCCTCGAT TGAGACGTCG 14295 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCCATCTTA GTTCCCCTCG GAGCATTGAT GACCCATGTT TGGCCTCGAT TGAGACGTCG 240 ACCACCGCCT ATCGGAGTCG ATGCCGCCCA AACGGTGTAT GGACAGTTGT TGCGTACCTC 14355 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCACCGCCT ATCGGAGTCG ATGCCGCCCA AACGGTGTAT GGACAGTTGT TGCGTACCTC 300 AATAGTGGCA GCATAAGTAT AAGTCACACA AAGAAGGAAG AAGAGAACAA AAGAAGATGT 14415 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| AATAGTGGCA GCATAAGTAT AAGTCACACA AAGAAGGAAG AAGAGAACAA AATAAGATGT 360 CA 14417 || CA 362 hqPGS_C08HBa0235H18.1+_SGN-E200826- (14056 14417) ******************************************************************************** EST sequence 802 -strand 313 n (File: SGN-E205710-) 1 AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG TAAGACTCCA 61 CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA ACCAGTACGA 121 CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT TTGGCCTCGA 181 TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA TGGACAGTTG 241 TTGCGTACCT CAATAGTGGC AGCATAAGTA CAAGTCACAC AAAGAAGGAA GAAGAGAACA 301 AAAGAAGATG TCA Predicted gene structure (within gDNA segment 13495 to 15017): Exon 1 14105 14417 ( 313 n); cDNA 1 313 ( 313 n); score: 0.997 MATCH C08HBa0235H18.1+ SGN-E205710- 0.997 313 1.000 C PGS_C08HBa0235H18.1+_SGN-E205710- (14105 14417) Alignment (genomic DNA sequence = upper lines): AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG TAAGACTCCA 14164 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG TAAGACTCCA 60 CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA ACCAGTACGA 14224 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA ACCAGTACGA 120 CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT TTGGCCTCGA 14284 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT TTGGCCTCGA 180 TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA TGGACAGTTG 14344 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA TGGACAGTTG 240 TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA GAAGAGAACA 14404 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| TTGCGTACCT CAATAGTGGC AGCATAAGTA CAAGTCACAC AAAGAAGGAA GAAGAGAACA 300 AAAGAAGATG TCA 14417 |||||||||| ||| AAAGAAGATG TCA 313 hqPGS_C08HBa0235H18.1+_SGN-E205710- (14105 14417) ******************************************************************************** EST sequence 805 -strand 299 n (File: SGN-E205598-) 1 TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 61 CTGACATGTA CCTCTGCTTG CAGCATTAAA GTTGCATCCA GTCCGACCCC ATATACGTGC 121 CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 181 ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT 241 AGTGGCAGCA TAAGTCTCAG TCACACACAG AAGGAAGAAG AGAACAAAAG AAGATGTCA Predicted gene structure (within gDNA segment 13509 to 15017): Exon 1 14119 14417 ( 299 n); cDNA 1 299 ( 299 n); score: 0.980 MATCH C08HBa0235H18.1+ SGN-E205598- 0.980 299 1.000 C PGS_C08HBa0235H18.1+_SGN-E205598- (14119 14417) Alignment (genomic DNA sequence = upper lines): TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 14178 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 60 CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC 14238 |||||||||| ||||||| || |||||||||| |||||| ||| || ||||||| |||||||||| CTGACATGTA CCTCTGCTTG CAGCATTAAA GTTGCATCCA GTCCGACCCC ATATACGTGC 120 CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 14298 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 180 ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT 14358 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT 240 AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATGTCA 14417 |||||||||| ||||| | || ||||||| || |||||||||| |||||||||| ||||||||| AGTGGCAGCA TAAGTCTCAG TCACACACAG AAGGAAGAAG AGAACAAAAG AAGATGTCA 299 hqPGS_C08HBa0235H18.1+_SGN-E205598- (14119 14417) ******************************************************************************** EST sequence 1212 -strand 296 n (File: SGN-E209515-) 1 GTGTTTGGGG GTTTGCCCCA TCCGGTTCAC TGTAAGACTC CACCACAATC ACCAGTCTGA 61 CATGTACCTC TGCCTGCAGC ATTAAAGTTG CACCCAGTAC GACCCCATAT ACGTGCCATG 121 TTAGTTCCCC TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG TCGACCACCG 181 CCTATCGGAG TCGATGCCGC CCAAACGGTG TATGGACAGT TGTTGCGTAC CTCAATAGTG 241 GCAGCATAAG TATAAGTCAC ACAAAGAAGG AAGAAGAGAA CAAAAGAAGA TGTCAA Predicted gene structure (within gDNA segment 13513 to 15018): Exon 1 14123 14418 ( 296 n); cDNA 1 296 ( 296 n); score: 0.990 MATCH C08HBa0235H18.1+ SGN-E209515- 0.990 296 1.000 C PGS_C08HBa0235H18.1+_SGN-E209515- (14123 14418) Alignment (genomic DNA sequence = upper lines): GTGTTTGGGG GTTTGCCCCA TCCGGTACAC TGTAAGACTC CACCACAATC ACCAGTCTGA 14182 |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| GTGTTTGGGG GTTTGCCCCA TCCGGTTCAC TGTAAGACTC CACCACAATC ACCAGTCTGA 60 CATGTACCTC TGCCTGCAGC ATTAAAGTTG CAACCAGTAC GACCCCATAT ACGTGCCATC 14242 |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| ||||||||| CATGTACCTC TGCCTGCAGC ATTAAAGTTG CACCCAGTAC GACCCCATAT ACGTGCCATG 120 TTAGTTCCCC TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG TCGACCACCG 14302 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAGTTCCCC TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG TCGACCACCG 180 CCTATCGGAG TCGATGCCGC CCAAACGGTG TATGGACAGT TGTTGCGTAC CTCAATAGTG 14362 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTATCGGAG TCGATGCCGC CCAAACGGTG TATGGACAGT TGTTGCGTAC CTCAATAGTG 240 GCAGCATAAG TATAAGTCAC ACAAAGAAGG AAGAAGAGAA CAAAAGAAGA TGTCAA 14418 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| GCAGCATAAG TATAAGTCAC ACAAAGAAGG AAGAAGAGAA CAAAAGAAGA TGTCAA 296 hqPGS_C08HBa0235H18.1+_SGN-E209515- (14123 14418) ******************************************************************************** EST sequence 1219 -strand 289 n (File: SGN-E249666-) 1 GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 61 CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 121 CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 181 GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT AGTGGCAGCA 241 TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATGTCA Predicted gene structure (within gDNA segment 13519 to 15017): Exon 1 14129 14417 ( 289 n); cDNA 1 289 ( 289 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E249666- 1.000 289 1.000 C PGS_C08HBa0235H18.1+_SGN-E249666- (14129 14417) Alignment (genomic DNA sequence = upper lines): GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 14188 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 60 CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 14248 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 120 CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 14308 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 180 GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT AGTGGCAGCA 14368 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT AGTGGCAGCA 240 TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATGTCA 14417 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATGTCA 289 hqPGS_C08HBa0235H18.1+_SGN-E249666- (14129 14417) ******************************************************************************** EST sequence 874 -strand 291 n (File: SGN-E390089-) 1 ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT CTGCCTGCAG 61 CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC CTCGGAGCAT 121 TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC GCCTATCGGA GTCGATGCCG 181 CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT GGCAGCATAA GTATAAGTCA 241 CACAAAGAAG GAAGAAGAGA ACAAAAGAAG ATGTCAAGTA GCCCATGTTT G Predicted gene structure (within gDNA segment 13532 to 15032): Exon 1 14142 14432 ( 291 n); cDNA 1 291 ( 291 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E390089- 1.000 291 1.000 C PGS_C08HBa0235H18.1+_SGN-E390089- (14142 14432) Alignment (genomic DNA sequence = upper lines): ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT CTGCCTGCAG 14201 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT CTGCCTGCAG 60 CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC CTCGGAGCAT 14261 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC CTCGGAGCAT 120 TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC GCCTATCGGA GTCGATGCCG 14321 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC GCCTATCGGA GTCGATGCCG 180 CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT GGCAGCATAA GTATAAGTCA 14381 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT GGCAGCATAA GTATAAGTCA 240 CACAAAGAAG GAAGAAGAGA ACAAAAGAAG ATGTCAAGTA GCCCATGTTT G 14432 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | CACAAAGAAG GAAGAAGAGA ACAAAAGAAG ATGTCAAGTA GCCCATGTTT G 291 hqPGS_C08HBa0235H18.1+_SGN-E390089- (14142 14432) ******************************************************************************** EST sequence 626 -strand 213 n (File: SGN-E335140-) 1 TGCCCCATNG NCGGGTACAC TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC 61 TGCCTGCAGC ATTAAAGTTG CAACCAGGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC 121 CTCGGAGCAT TGATGACCCA TGGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG 181 AGTCGATGCC GCCCAAACGG TTATGGACAG GTT Predicted gene structure (within gDNA segment 13406 to 15051): Exon 1 14146 14341 ( 196 n); cDNA 14 210 ( 197 n); score: 0.969 MATCH C08HBa0235H18.1+ SGN-E335140- 0.969 196 0.920 C PGS_C08HBa0235H18.1+_SGN-E335140- (14146 14341) Alignment (genomic DNA sequence = upper lines): GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 14205 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 73 AAAGTTGCAA CCA-GTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA 14264 |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGTTGCAA CCAGGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA 133 TGACCCAT-G TTTGGCCTCG ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC 14323 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACCCATGG TTTGGCCTCG ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC 193 CAAACGGTGT ATGGACAG 14341 |||||||| | |||||||| CAAACGGT-T ATGGACAG 210 hqPGS_C08HBa0235H18.1+_SGN-E335140- (14146 14341) ******************************************************************************** EST sequence 650 -strand 255 n (File: SGN-E264435-) 1 TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 61 ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 121 TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA 181 TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA 241 GAAGAGAACA AAAGA Predicted gene structure (within gDNA segment 13545 to 15009): Exon 1 14155 14409 ( 255 n); cDNA 1 255 ( 255 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E264435- 1.000 255 1.000 C PGS_C08HBa0235H18.1+_SGN-E264435- (14155 14409) Alignment (genomic DNA sequence = upper lines): TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 14214 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 60 ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 14274 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 120 TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA 14334 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA 180 TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA 14394 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA 240 GAAGAGAACA AAAGA 14409 |||||||||| ||||| GAAGAGAACA AAAGA 255 hqPGS_C08HBa0235H18.1+_SGN-E264435- (14155 14409) ******************************************************************************** EST sequence 755 -strand 257 n (File: SGN-E263895-) 1 CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG ACCCCATATA 61 CGTCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGACGTC 121 GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA TGGACAGTTG TTGCGTACCT 181 CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA GAAGAGAACA AAAGAAGATG 241 TCAAGTAGCC CATGTTT Predicted gene structure (within gDNA segment 13564 to 15031): Exon 1 14174 14431 ( 258 n); cDNA 1 257 ( 257 n); score: 0.996 MATCH C08HBa0235H18.1+ SGN-E263895- 0.996 258 1.004 C PGS_C08HBa0235H18.1+_SGN-E263895- (14174 14431) Alignment (genomic DNA sequence = upper lines): CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG ACCCCATATA 14233 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG ACCCCATATA 60 CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG TTTGGCCTCG ATTGAGACGT 14293 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGT-CCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG TTTGGCCTCG ATTGAGACGT 119 CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT ATGGACAGTT GTTGCGTACC 14353 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT ATGGACAGTT GTTGCGTACC 179 TCAATAGTGG CAGCATAAGT ATAAGTCACA CAAAGAAGGA AGAAGAGAAC AAAAGAAGAT 14413 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAATAGTGG CAGCATAAGT ATAAGTCACA CAAAGAAGGA AGAAGAGAAC AAAAGAAGAT 239 GTCAAGTAGC CCATGTTT 14431 |||||||||| |||||||| GTCAAGTAGC CCATGTTT 257 hqPGS_C08HBa0235H18.1+_SGN-E263895- (14174 14431) ******************************************************************************** EST sequence 849 -strand 193 n (File: SGN-E335797-) 1 TGACATGAAC TCTACCCAGC ACCATCAAAG TTGCAATTCG TACGACCCCA TATACGTGCC 61 ATCTTAGTGC CCCTCGGTGC ATTGATGACC CATGTTTGGC CTCGATCAAG ACGTCGACCA 121 CCGCCTATTG GGGTCGACGC CGCCCAGACG GTGTATGGAC AGTTGTTGCG TACCTCGAAA 181 GTGGCAGCAT AAG Predicted gene structure (within gDNA segment 13219 to 15557): Exon 1 14180 14372 ( 193 n); cDNA 1 193 ( 193 n); score: 0.886 MATCH C08HBa0235H18.1+ SGN-E335797- 0.886 193 1.000 C PGS_C08HBa0235H18.1+_SGN-E335797- (14180 14372) Alignment (genomic DNA sequence = upper lines): TGACATGTAC CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC 14239 ||||||| || || || | ||| |||| |||||| | |||||||||| |||||||||| TGACATGAAC TCTACCCAGC ACCATCAAAG TTGCAATTCG TACGACCCCA TATACGTGCC 60 ATCTTAGTTC CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA 14299 |||||||| | ||||||| || |||||||||| |||||||||| |||||| || |||||||||| ATCTTAGTGC CCCTCGGTGC ATTGATGACC CATGTTTGGC CTCGATCAAG ACGTCGACCA 120 CCGCCTATCG GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA 14359 |||||||| | | ||||| || |||||| ||| |||||||||| |||||||||| |||||| | | CCGCCTATTG GGGTCGACGC CGCCCAGACG GTGTATGGAC AGTTGTTGCG TACCTCGAAA 180 GTGGCAGCAT AAG 14372 |||||||||| ||| GTGGCAGCAT AAG 193 hqPGS_C08HBa0235H18.1+_SGN-E335797- (14180 14372) ******************************************************************************** EST sequence 727 -strand 260 n (File: SGN-E255362-) 1 CATGTACCTC TGCCTGCAGC ATTAAAGTTG CAACCAGTAC GACCCCATAT ACGTGCCATC 61 TTAGTTCCCC TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG TCGACCACCG 121 CCTATCGGAG TCGATGCCGC CCAAACGGTG TATGGACAGT TGTTGCGTAC CTCAATAGTG 181 GCAGCATAAG TATAACGTCA CACACAGAAG GAAGAAGAGA ACAAAAGAAG ATGTCAAGTA 241 GCCCATGTTT GCCTGCAGCC Predicted gene structure (within gDNA segment 13573 to 15122): Exon 1 14183 14427 ( 245 n); cDNA 1 246 ( 246 n); score: 0.986 MATCH C08HBa0235H18.1+ SGN-E255362- 0.986 245 0.942 C PGS_C08HBa0235H18.1+_SGN-E255362- (14183 14427) Alignment (genomic DNA sequence = upper lines): CATGTACCTC TGCCTGCAGC ATTAAAGTTG CAACCAGTAC GACCCCATAT ACGTGCCATC 14242 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGTACCTC TGCCTGCAGC ATTAAAGTTG CAACCAGTAC GACCCCATAT ACGTGCCATC 60 TTAGTTCCCC TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG TCGACCACCG 14302 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAGTTCCCC TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG TCGACCACCG 120 CCTATCGGAG TCGATGCCGC CCAAACGGTG TATGGACAGT TGTTGCGTAC CTCAATAGTG 14362 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTATCGGAG TCGATGCCGC CCAAACGGTG TATGGACAGT TGTTGCGTAC CTCAATAGTG 180 GCAGCATAAG TATAA-GTCA CACAAAGAAG GAAGAAGAGA ACAAAAGAAG ATGTCAAGTA 14421 |||||||||| ||||| |||| |||| ||||| |||||||||| |||||||||| |||||||||| GCAGCATAAG TATAACGTCA CACACAGAAG GAAGAAGAGA ACAAAAGAAG ATGTCAAGTA 240 GCCCAT 14427 |||||| GCCCAT 246 hqPGS_C08HBa0235H18.1+_SGN-E255362- (14183 14427) ******************************************************************************** EST sequence 871 -strand 221 n (File: SGN-E200076-) 1 GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 61 TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATGCC 121 GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA AGTATAAGTC 181 ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT A Predicted gene structure (within gDNA segment 13591 to 15021): Exon 1 14201 14421 ( 221 n); cDNA 1 221 ( 221 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E200076- 1.000 221 1.000 C PGS_C08HBa0235H18.1+_SGN-E200076- (14201 14421) Alignment (genomic DNA sequence = upper lines): GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 14260 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 60 TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATGCC 14320 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATGCC 120 GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA AGTATAAGTC 14380 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA AGTATAAGTC 180 ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT A 14421 |||||||||| |||||||||| |||||||||| |||||||||| | ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT A 221 hqPGS_C08HBa0235H18.1+_SGN-E200076- (14201 14421) ******************************************************************************** EST sequence 494 -strand 112 n (File: SGN-E537407-) 1 TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA 61 GAAGAGAACA AAAGAAGATG TCAAGTAGCC CATGTTTGTT GAAATGTATA TA Predicted gene structure (within gDNA segment 13725 to 15046): Exon 1 14335 14446 ( 112 n); cDNA 1 112 ( 112 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E537407- 1.000 112 1.000 C PGS_C08HBa0235H18.1+_SGN-E537407- (14335 14446) Alignment (genomic DNA sequence = upper lines): TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA 14394 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA 60 GAAGAGAACA AAAGAAGATG TCAAGTAGCC CATGTTTGTT GAAATGTATA TA 14446 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || GAAGAGAACA AAAGAAGATG TCAAGTAGCC CATGTTTGTT GAAATGTATA TA 112 hqPGS_C08HBa0235H18.1+_SGN-E537407- (14335 14446) ******************************************************************************** EST sequence 677 -strand 543 n (File: SGN-E253853-) 1 GCATAAGTAT AAGTCACACA AAGAAGGAAG AAGAGAACAA AAGAAGATGT CAAGTAGCCC 61 ATGTTTGCTA GTCTCGAGTT TTTTTTTTTT TTTTTTTTTA AAAATTAGGA ATGTATAGAA 121 CAAAATATAA AATCTTAAAA GCTAGTCTTT CTTAGGTTCA CATAGCAGTT ACTTCCAAAA 181 GTTAAAACAT AAATCAAAAT TATCCCATTA CATCATTTAA CTGAAGGGAG ATGCAAATCA 241 AAAAGCTCTA ATGCCATATG TCTTCTACCA GCACCAAATG TAGAGGTCCT CGTAGAAACT 301 CGTATTCAAG ATTTTTAACG GTACTTGATG AAGCCAATTT CCTTGGCATT GCTGCGGAAG 361 CACTGTCTGC AACACATGAG TCCATACTTT CTAATAATTG CATGAGGATT ACCACACACA 421 CGGCATGTGC GAGAGCCAGG GCCGTAGTTC TTTGGGTGAG CGTTCCAGAT GTTAGAGTGA 481 CCCATCTTCA CAGAAAAGCG AGGCTGCGCG ATGTGTTTGC AAGAAAACCC TACTTTTGCA 541 GAA Predicted gene structure (within gDNA segment 13756 to 19792): Exon 1 14366 14427 ( 62 n); cDNA 1 62 ( 62 n); score: 1.000 Intron 1 14428 15419 ( 992 n); Pd: 0.397 (s: 1.00), Pa: 1.000 (s: 0) Exon 2 15420 15436 ( 17 n); cDNA 63 80 ( 18 n); score: 0.441 Intron 2 15437 15947 ( 511 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.69) Exon 3 15948 15992 ( 45 n); cDNA 81 124 ( 44 n); score: 0.689 Intron 3 15993 17058 (1066 n); Pd: 0.000 (s: 0.69), Pa: 0.980 (s: 0) Exon 4 17059 17075 ( 17 n); cDNA 125 141 ( 17 n); score: 0.529 MATCH C08HBa0235H18.1+ SGN-E253853- 1.000 141 0.260 C PGS_C08HBa0235H18.1+_SGN-E253853- (14366 14427,15420 15436,15948 15992,17059 17075) Alignment (genomic DNA sequence = upper lines): GCATAAGTAT AAGTCACACA AAGAAGGAAG AAGAGAACAA AAGAAGATGT CAAGTAGCCC 14425 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCATAAGTAT AAGTCACACA AAGAAGGAAG AAGAGAACAA AAGAAGATGT CAAGTAGCCC 60 ATGTTTGTTG AAATGTATAT ATGAGGATAA CTTATTTGAA AGCACTTTAT ATAGGGGTGT 14485 || AT........ .......... .......... .......... .......... .......... 62 GGCGGCTTTT GGCACTATGT ATATTAATCA TAAATAACAA TATCATATTT GACAAAAAAC 14545 .......... .......... .......... .......... .......... .......... 62 GAATAATATT AAAATACGAT ATAGTAAAGT GGAGGTGAAA AAAGAAAAAA TGTATAAGAG 14605 .......... .......... .......... .......... .......... .......... 62 CCGCCTAATA AATAATAATT TTATAAATAT AGTACAAGTT CACTTTATTT GGTGACAACT 14665 .......... .......... .......... .......... .......... .......... 62 TTGTAACGTG ACGGAACTTA TTTCTCAAAA TAAATATTAT TTAAAAAAAA AAAACAGCAT 14725 .......... .......... .......... .......... .......... .......... 62 CTTTCGTGAC CAAAGTTTCT TTCTATATTT ATCAATTCCA TTTTTTTTAC TTTGACAGTA 14785 .......... .......... .......... .......... .......... .......... 62 TTTTGTATAC GTTTAAACAT AAAAATTAGG TTTTTCATAT TACTCGTATG GATCGATTAA 14845 .......... .......... .......... .......... .......... .......... 62 TTTCAAATAT ACAAATCAAT TCGATTAACT ATTATATACA GTGGAAATGA TGTTTATGTG 14905 .......... .......... .......... .......... .......... .......... 62 ACTCGTAATT GATATTTTAA GCGATCAGAA TATTTTAATG CATATCTATT AAGAAAATAC 14965 .......... .......... .......... .......... .......... .......... 62 CTATTGATGC AAAAGTCAAC AAAATTATTT AATTTATTTA TTTTACGATC GAAGCATGAA 15025 .......... .......... .......... .......... .......... .......... 62 TACATTTACT AATTAAAGTA AATTGGGAGG AATTGATGGA CGAGTCATCA AGCTTATCAA 15085 .......... .......... .......... .......... .......... .......... 62 ATGTCAATCA ACATTAAAAT AATGTTAGTT TATGGCTGCT TTTAAATGAA CAAGTGGATC 15145 .......... .......... .......... .......... .......... .......... 62 ATGTACAATT GAGTAAAAAA TATCTCCTAT AAATATATAT ATCCCTCTAA AACCAAATAA 15205 .......... .......... .......... .......... .......... .......... 62 CATAACACAC AAATATAAAC TTTAGATTCT TAAAAACAAA GCTGAATTAT ATGGAGGCAA 15265 .......... .......... .......... .......... .......... .......... 62 ATAAGTCTAT GGTGAAGTTG GTTGCTTTCT TGATAATTCT TGTATCATCA TGTAATTAAT 15325 .......... .......... .......... .......... .......... .......... 62 TGACCATTTA TTTCTACTTT ATTAAATTTA TTCACATTTC TTATTTTTAT TTGTTAAAAG 15385 .......... .......... .......... .......... .......... .......... 62 AAATTGATTA ATTATGTAAA TTATTTATGA ACAGGCTTTC -AATCTCTCA CTGCTCAAGA 15444 | || | | |||| | .......... .......... .......... ....GTTTGC TAGTCTCGAG TT........ 80 TTTGGAAATC GAAGTTAGCG ATGGCTTAAA TGTATTGCAA GTACATGATG TGTCTCAATC 15504 .......... .......... .......... .......... .......... .......... 80 TTTTTGTCCA GGTTTGGTTT TTATCTCTAC CGTCCTTTTT GGATATATAT ACACGTACGA 15564 .......... .......... .......... .......... .......... .......... 80 CGTCCAACTA AATCTAAATA AATTTTTGGA TCGAATCTTA GGTCGATTAT CAGGGTAATA 15624 .......... .......... .......... .......... .......... .......... 80 TCTATAGATT CGAGTGTTGG GGTTGAGGTC ATATCCCAAT TTAAATGTCA TGTTTCGAGT 15684 .......... .......... .......... .......... .......... .......... 80 TGGGAGTTAG GGTCAGGTAC TAGGTTAAAT CCCATGCTCG GATACTGAGT CTGTTGTCGA 15744 .......... .......... .......... .......... .......... .......... 80 GTTATGTCCT AATTCACGTG TCGAAATCGA GTTCCGAATG AATTTTCGAT CAGAAACTAT 15804 .......... .......... .......... .......... .......... .......... 80 TTTCCTACTC TCTAGCCAAA TATAAAAGAT ATTTTCTAAA AAATATTTTC CTTCGTAGCA 15864 .......... .......... .......... .......... .......... .......... 80 AACACACCAT AATTAATTAT TTTTTTCTCA TATAAAATAA CTTTTGATTC ATAGTTTTTT 15924 .......... .......... .......... .......... .......... .......... 80 AGTCAATGCT CTTTTATAAA TAATTAGTTG TATTTTTTTT TTATAAATTA TAGGTGTGAC 15984 || || | |||||||| ||| |||||| ||| | .......... .......... ...TTTTTTT TTTTTTTTTT TTAAAAATTA GGAATGT-AT 116 AAAGGAAAGT TGGCCAGAAC TTCTTGGAAC ACCAGCTAAG TTTGCAAAGC AAATAATTCA 16044 | | ||| AGAACAAA.. .......... .......... .......... .......... .......... 124 AAAGGAAAAT CCAAAATTAA CAAATGTTGA AACTCTACTG AATGGTTCAG CTTTTACAGA 16104 .......... .......... .......... .......... .......... .......... 124 AGATTTGAGA TGCAATAGAG TTCGTCTTTT TGTAAATTTA TTGGACATTG TTGTACAAAC 16164 .......... .......... .......... .......... .......... .......... 124 TCCCAAAGTT GGTTGAACAA AATTAATTGA TGTTATATCA TATGTATCTA GCCTCCACAA 16224 .......... .......... .......... .......... .......... .......... 124 AAATAAATTG GAGATGTATG GTTAAAATTT CCACTATATT TGGTGATAAA TAAATGTGGC 16284 .......... .......... .......... .......... .......... .......... 124 TTTTAATATT AATATGATTT TTGTTATATA TACAATTACT TCTACTATAT ACCAGTGAAA 16344 .......... .......... .......... .......... .......... .......... 124 TCTCATTAGC ATTGGGAAGG TGTTACGTAC GCAACCTTAT CTTATGCTAA CTATCATCAG 16404 .......... .......... .......... .......... .......... .......... 124 GGCGGTCTTA ACGCTATGCA ACTAAAGGGG GGTGGGGGGT ATTTCTAAGA AAAAATTAAT 16464 .......... .......... .......... .......... .......... .......... 124 TATAAATGTT ATTTTAAAAA TAATTATATG TACTATGAGT GGTATGATTT CTACAAGGAA 16524 .......... .......... .......... .......... .......... .......... 124 ATTGCATATA TAATGAGTAT ATCATCTCAA TTGTGACTTT GATGAAAAGT TCTGACTTTT 16584 .......... .......... .......... .......... .......... .......... 124 AAGAAAATTT TGTCTTTTAT GAAAGATAGT GACATTTGTT TTATCGAAAA AGGGTGGTGA 16644 .......... .......... .......... .......... .......... .......... 124 TTTTCGAAAA GAGTTTGTTT TTAGACTTTT AGGAGTCGCC ACTTAATTTT TAAGAAAAAT 16704 .......... .......... .......... .......... .......... .......... 124 CAAGAAAACT TCGTTTCTAA ACAACTTAAA CAGAAAAAAT TGTTTTGAAA CATTTTAAGG 16764 .......... .......... .......... .......... .......... .......... 124 GTTCGGGATT CCTATTAGTA TCTTAGGAAG GTGTAAGGCA CCCAAAACAC TCCGTTAACT 16824 .......... .......... .......... .......... .......... .......... 124 TACGGTTTTC CAATGATTAA CTATTTGATT ATTTTTATTT TTAACCTTTG CAAATTTATT 16884 .......... .......... .......... .......... .......... .......... 124 TGAACTTTTA ACATGACTTA CTTAGCCAAA CTTAGCCAAT TTTGAAATAT TTATTGTTTA 16944 .......... .......... .......... .......... .......... .......... 124 TCTTGCCAGT TTACGAAACC ATTTCAAAGT TAAGCTTACT CAAGGTTTTA TCTAAACAAG 17004 .......... .......... .......... .......... .......... .......... 124 CCTTACGAAT TTGAAACAAT TTATCATTTA GAAGTTAGTT TTAAAAATTT TTAGGTTTGA 17064 | | | .......... .......... .......... .......... .......... ....ATATAA 130 TAAAATAACA G 17075 | ||| | | AATCTTAAAA G 141 hqPGS_C08HBa0235H18.1+_SGN-E253853- (14366 14427) ******************************************************************************** EST sequence 242 +strand 594 n (File: SGN-E255656+) 1 TTTTGGGAAT GGTGTCTGCG AAAGCAAGAA GTCTAGAGAA TGCTGATGCT TCTGTAGCTG 61 TGAACTCCTC ACAGATGGGT GTTGGTACCA GTGGTAGCGG AAGTTTTGAC TCTCCAACTG 121 TTTCCACTGC CCACACAAAT GGTGCAGCTG GAATAACCCA TCTTGGAGTA GTTGGAAGAG 181 GAGTCAAGAG GGTGCATCTA AACACAACCA CAGAATCTAG TCCAGCGAAA AAACCTGCAT 241 CTGAGCAGCC GTCAGATAAT GGAGATGGCA CTGCCTCTTA AAGCATGTAT TGTTGGTGCT 301 TCAATTAAGT TACGGTTAAC ATTTCAATTT AGCTTATTGA TAACATTGGT GGATTACCTT 361 AGTTTGTTGC ATTCTCTGTT GGTTAGCTGG GAAGTGTGTT GCCACAGATC GCATCAGTTT 421 ATTTCCTTAA ATTAATTACC TTGTATGCAT GTTGACTATT CAAAAAAAAA AAAAAAAAAC 481 TCGAACTTTA GATTCTTAAA AACAAAGCTG AATTATATGG AGGCAAATAA GTCTATGGTG 541 AAGTTGGTTG CTTTCTTGAT AATTCTTGTA TCATCATGCT TTCAATCTCT CACT Predicted gene structure (within gDNA segment 9793 to 16087): Exon 1 14703 14721 ( 19 n); cDNA 457 474 ( 18 n); score: 0.895 Intron 1 14722 15213 ( 492 n); Pd: 0.935 (s: 0), Pa: 0.000 (s: 0.90) Exon 2 15214 15316 ( 103 n); cDNA 475 577 ( 103 n); score: 0.951 Intron 2 15317 15419 ( 103 n); Pd: 0.747 (s: 1.00), Pa: 1.000 (s: 0) Exon 3 15420 15436 ( 17 n); cDNA 578 594 ( 17 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E255656+ 0.951 139 0.234 C PGS_C08HBa0235H18.1+_SGN-E255656+ (14703 14721,15214 15316,15420 15436) Alignment (genomic DNA sequence = upper lines): TATTTAAAAA AAAAAAACAG CATCTTTCGT GACCAAAGTT TCTTTCTATA TTTATCAATT 14762 |||| ||||| ||||||| | TATTCAAAAA AAAAAAA-A. .......... .......... .......... .......... 474 CCATTTTTTT TACTTTGACA GTATTTTGTA TACGTTTAAA CATAAAAATT AGGTTTTTCA 14822 .......... .......... .......... .......... .......... .......... 474 TATTACTCGT ATGGATCGAT TAATTTCAAA TATACAAATC AATTCGATTA ACTATTATAT 14882 .......... .......... .......... .......... .......... .......... 474 ACAGTGGAAA TGATGTTTAT GTGACTCGTA ATTGATATTT TAAGCGATCA GAATATTTTA 14942 .......... .......... .......... .......... .......... .......... 474 ATGCATATCT ATTAAGAAAA TACCTATTGA TGCAAAAGTC AACAAAATTA TTTAATTTAT 15002 .......... .......... .......... .......... .......... .......... 474 TTATTTTACG ATCGAAGCAT GAATACATTT ACTAATTAAA GTAAATTGGG AGGAATTGAT 15062 .......... .......... .......... .......... .......... .......... 474 GGACGAGTCA TCAAGCTTAT CAAATGTCAA TCAACATTAA AATAATGTTA GTTTATGGCT 15122 .......... .......... .......... .......... .......... .......... 474 GCTTTTAAAT GAACAAGTGG ATCATGTACA ATTGAGTAAA AAATATCTCC TATAAATATA 15182 .......... .......... .......... .......... .......... .......... 474 TATATCCCTC TAAAACCAAA TAACATAACA CACAAATATA AACTTTAGAT TCTTAAAAAC 15242 | ||| |||||||||| |||||||||| .......... .......... .......... .AAAAACTCG AACTTTAGAT TCTTAAAAAC 503 AAAGCTGAAT TATATGGAGG CAAATAAGTC TATGGTGAAG TTGGTTGCTT TCTTGATAAT 15302 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGCTGAAT TATATGGAGG CAAATAAGTC TATGGTGAAG TTGGTTGCTT TCTTGATAAT 563 TCTTGTATCA TCATGTAATT AATTGACCAT TTATTTCTAC TTTATTAAAT TTATTCACAT 15362 |||||||||| |||| TCTTGTATCA TCAT...... .......... .......... .......... .......... 577 TTCTTATTTT TATTTGTTAA AAGAAATTGA TTAATTATGT AAATTATTTA TGAACAGGCT 15422 ||| .......... .......... .......... .......... .......... .......GCT 580 TTCAATCTCT CACT 15436 |||||||||| |||| TTCAATCTCT CACT 594 hqPGS_C08HBa0235H18.1+_SGN-E255656+ (15214 15316,15420 15436) ******************************************************************************** EST sequence 351 +strand 570 n (File: SGN-E398199+) 1 CAAATATAAA CTTTAGATTC TTAAAAACAA AGCTGAATTA TATGGAGGCA AATAAGTCTA 61 TGGTGAAGTT GGTTGCTTTC TTGATAATTC TTGTATCATC ATGCTTTCAA TCTCTCACTG 121 CTCAAGATTT GGAAATCGAA GTTAGCGATG GCTTAAATGT ATTGCAAGTA CATGATGTGT 181 CTCAATCTTT TTGTCCAGGT GTGACAAAGG AAAGTTGGCC AGAACTTCTT GGAACACCAG 241 CTAAGTTTGC AAAGCAAATA ATTCAAAAGG AAAATCCAAA ATTAACAAAT GTTGAAACTC 301 TACTGAATGG TTCAGCTTTT ACAGAAGATT TGAGATGCAA TAGAGTTCGT CTTTTTGTAA 361 ATTTATTGGA CATTGTTGTA CAAACTCCCA AAGTTGGTTG AACAAAATTA ATTGATGTTA 421 TATCATATGT ATCTAGCCTC CACAAAAATA AATTGGAGAT GTATGGTTAA AATTTCCACT 481 ATATTTGGTG ATAAATAAAT GTGGCTTTTA ATATTANAAA AAAAAAAAAA AAAAAAAAAA 541 AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA Predicted gene structure (within gDNA segment 14615 to 17445): Exon 1 15215 15316 ( 102 n); cDNA 1 102 ( 102 n); score: 1.000 Intron 1 15317 15419 ( 103 n); Pd: 0.747 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 15420 15515 ( 96 n); cDNA 103 198 ( 96 n); score: 1.000 Intron 2 15516 15977 ( 462 n); Pd: 0.717 (s: 1.00), Pa: 0.999 (s: 1.00) Exon 3 15978 16295 ( 318 n); cDNA 199 516 ( 318 n); score: 1.000 PPA cDNA 520 570 MATCH C08HBa0235H18.1+ SGN-E398199+ 1.000 516 0.905 C PGS_C08HBa0235H18.1+_SGN-E398199+ (15215 15316,15420 15515,15978 16295) Alignment (genomic DNA sequence = upper lines): CAAATATAAA CTTTAGATTC TTAAAAACAA AGCTGAATTA TATGGAGGCA AATAAGTCTA 15274 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAATATAAA CTTTAGATTC TTAAAAACAA AGCTGAATTA TATGGAGGCA AATAAGTCTA 60 TGGTGAAGTT GGTTGCTTTC TTGATAATTC TTGTATCATC ATGTAATTAA TTGACCATTT 15334 |||||||||| |||||||||| |||||||||| |||||||||| || TGGTGAAGTT GGTTGCTTTC TTGATAATTC TTGTATCATC AT........ .......... 102 ATTTCTACTT TATTAAATTT ATTCACATTT CTTATTTTTA TTTGTTAAAA GAAATTGATT 15394 .......... .......... .......... .......... .......... .......... 102 AATTATGTAA ATTATTTATG AACAGGCTTT CAATCTCTCA CTGCTCAAGA TTTGGAAATC 15454 ||||| |||||||||| |||||||||| |||||||||| .......... .......... .....GCTTT CAATCTCTCA CTGCTCAAGA TTTGGAAATC 137 GAAGTTAGCG ATGGCTTAAA TGTATTGCAA GTACATGATG TGTCTCAATC TTTTTGTCCA 15514 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGTTAGCG ATGGCTTAAA TGTATTGCAA GTACATGATG TGTCTCAATC TTTTTGTCCA 197 GGTTTGGTTT TTATCTCTAC CGTCCTTTTT GGATATATAT ACACGTACGA CGTCCAACTA 15574 | G......... .......... .......... .......... .......... .......... 198 AATCTAAATA AATTTTTGGA TCGAATCTTA GGTCGATTAT CAGGGTAATA TCTATAGATT 15634 .......... .......... .......... .......... .......... .......... 198 CGAGTGTTGG GGTTGAGGTC ATATCCCAAT TTAAATGTCA TGTTTCGAGT TGGGAGTTAG 15694 .......... .......... .......... .......... .......... .......... 198 GGTCAGGTAC TAGGTTAAAT CCCATGCTCG GATACTGAGT CTGTTGTCGA GTTATGTCCT 15754 .......... .......... .......... .......... .......... .......... 198 AATTCACGTG TCGAAATCGA GTTCCGAATG AATTTTCGAT CAGAAACTAT TTTCCTACTC 15814 .......... .......... .......... .......... .......... .......... 198 TCTAGCCAAA TATAAAAGAT ATTTTCTAAA AAATATTTTC CTTCGTAGCA AACACACCAT 15874 .......... .......... .......... .......... .......... .......... 198 AATTAATTAT TTTTTTCTCA TATAAAATAA CTTTTGATTC ATAGTTTTTT AGTCAATGCT 15934 .......... .......... .......... .......... .......... .......... 198 CTTTTATAAA TAATTAGTTG TATTTTTTTT TTATAAATTA TAGGTGTGAC AAAGGAAAGT 15994 ||||||| |||||||||| .......... .......... .......... .......... ...GTGTGAC AAAGGAAAGT 215 TGGCCAGAAC TTCTTGGAAC ACCAGCTAAG TTTGCAAAGC AAATAATTCA AAAGGAAAAT 16054 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGCCAGAAC TTCTTGGAAC ACCAGCTAAG TTTGCAAAGC AAATAATTCA AAAGGAAAAT 275 CCAAAATTAA CAAATGTTGA AACTCTACTG AATGGTTCAG CTTTTACAGA AGATTTGAGA 16114 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAAAATTAA CAAATGTTGA AACTCTACTG AATGGTTCAG CTTTTACAGA AGATTTGAGA 335 TGCAATAGAG TTCGTCTTTT TGTAAATTTA TTGGACATTG TTGTACAAAC TCCCAAAGTT 16174 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCAATAGAG TTCGTCTTTT TGTAAATTTA TTGGACATTG TTGTACAAAC TCCCAAAGTT 395 GGTTGAACAA AATTAATTGA TGTTATATCA TATGTATCTA GCCTCCACAA AAATAAATTG 16234 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTTGAACAA AATTAATTGA TGTTATATCA TATGTATCTA GCCTCCACAA AAATAAATTG 455 GAGATGTATG GTTAAAATTT CCACTATATT TGGTGATAAA TAAATGTGGC TTTTAATATT 16294 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGATGTATG GTTAAAATTT CCACTATATT TGGTGATAAA TAAATGTGGC TTTTAATATT 515 A 16295 | A 516 hqPGS_C08HBa0235H18.1+_SGN-E398199+ (15215 15316,15420 15515,15978 16295) ******************************************************************************** EST sequence 350 +strand 517 n (File: SGN-E395189+) 1 CAAATATAAA CTTTAGATTC TTAAAAACAA AGCTGAATTA TATGGAGGCA AATAAGTCTA 61 TGGTGAAGTT GGTTGCTTTC TTGATAATTC TTGTATCATC ATGCTTTCAA TCTCTCACTG 121 CTCAAGATTT GGAAATCGAA GTTAGCGATG GCTTAAATGT ATTGCAAGTA CATGATGTGT 181 CTCAATCTTT TTGTCCAGGT GTGACAAAGG AAAGTTGGCC AGAACTTCTT GGAACACCAG 241 CTAAGTTTGC AAAGCAAATA ATTCAAAAGG AAAATCCAAA ATTAACAAAT GTTGAAACTC 301 TACTGAATGG TTCAGCTTTT ACAGAAGATT TGAGATGCAA TAGAGTTCGT CTTTTTGTAA 361 ATTTATTGGA CATTGGTTGT ACAAACTCCC AAAGTTGGTT GAACAAAATT AATTGATGTT 421 ATATCATATG TATCTAGCCT CCACAAAAAA TAAATTGGAG ATGTATGGTT AAAATTTCCC 481 CTATATTTGG TGATAAATAA ATGTGGCTTT TAATATT Predicted gene structure (within gDNA segment 14615 to 16904): Exon 1 15215 15316 ( 102 n); cDNA 1 102 ( 102 n); score: 1.000 Intron 1 15317 15419 ( 103 n); Pd: 0.747 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 15420 15515 ( 96 n); cDNA 103 198 ( 96 n); score: 1.000 Intron 2 15516 15977 ( 462 n); Pd: 0.717 (s: 1.00), Pa: 0.999 (s: 1.00) Exon 3 15978 16294 ( 317 n); cDNA 199 517 ( 319 n); score: 0.981 MATCH C08HBa0235H18.1+ SGN-E395189+ 0.988 515 0.996 C PGS_C08HBa0235H18.1+_SGN-E395189+ (15215 15316,15420 15515,15978 16294) Alignment (genomic DNA sequence = upper lines): CAAATATAAA CTTTAGATTC TTAAAAACAA AGCTGAATTA TATGGAGGCA AATAAGTCTA 15274 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAATATAAA CTTTAGATTC TTAAAAACAA AGCTGAATTA TATGGAGGCA AATAAGTCTA 60 TGGTGAAGTT GGTTGCTTTC TTGATAATTC TTGTATCATC ATGTAATTAA TTGACCATTT 15334 |||||||||| |||||||||| |||||||||| |||||||||| || TGGTGAAGTT GGTTGCTTTC TTGATAATTC TTGTATCATC AT........ .......... 102 ATTTCTACTT TATTAAATTT ATTCACATTT CTTATTTTTA TTTGTTAAAA GAAATTGATT 15394 .......... .......... .......... .......... .......... .......... 102 AATTATGTAA ATTATTTATG AACAGGCTTT CAATCTCTCA CTGCTCAAGA TTTGGAAATC 15454 ||||| |||||||||| |||||||||| |||||||||| .......... .......... .....GCTTT CAATCTCTCA CTGCTCAAGA TTTGGAAATC 137 GAAGTTAGCG ATGGCTTAAA TGTATTGCAA GTACATGATG TGTCTCAATC TTTTTGTCCA 15514 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGTTAGCG ATGGCTTAAA TGTATTGCAA GTACATGATG TGTCTCAATC TTTTTGTCCA 197 GGTTTGGTTT TTATCTCTAC CGTCCTTTTT GGATATATAT ACACGTACGA CGTCCAACTA 15574 | G......... .......... .......... .......... .......... .......... 198 AATCTAAATA AATTTTTGGA TCGAATCTTA GGTCGATTAT CAGGGTAATA TCTATAGATT 15634 .......... .......... .......... .......... .......... .......... 198 CGAGTGTTGG GGTTGAGGTC ATATCCCAAT TTAAATGTCA TGTTTCGAGT TGGGAGTTAG 15694 .......... .......... .......... .......... .......... .......... 198 GGTCAGGTAC TAGGTTAAAT CCCATGCTCG GATACTGAGT CTGTTGTCGA GTTATGTCCT 15754 .......... .......... .......... .......... .......... .......... 198 AATTCACGTG TCGAAATCGA GTTCCGAATG AATTTTCGAT CAGAAACTAT TTTCCTACTC 15814 .......... .......... .......... .......... .......... .......... 198 TCTAGCCAAA TATAAAAGAT ATTTTCTAAA AAATATTTTC CTTCGTAGCA AACACACCAT 15874 .......... .......... .......... .......... .......... .......... 198 AATTAATTAT TTTTTTCTCA TATAAAATAA CTTTTGATTC ATAGTTTTTT AGTCAATGCT 15934 .......... .......... .......... .......... .......... .......... 198 CTTTTATAAA TAATTAGTTG TATTTTTTTT TTATAAATTA TAGGTGTGAC AAAGGAAAGT 15994 ||||||| |||||||||| .......... .......... .......... .......... ...GTGTGAC AAAGGAAAGT 215 TGGCCAGAAC TTCTTGGAAC ACCAGCTAAG TTTGCAAAGC AAATAATTCA AAAGGAAAAT 16054 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGCCAGAAC TTCTTGGAAC ACCAGCTAAG TTTGCAAAGC AAATAATTCA AAAGGAAAAT 275 CCAAAATTAA CAAATGTTGA AACTCTACTG AATGGTTCAG CTTTTACAGA AGATTTGAGA 16114 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAAAATTAA CAAATGTTGA AACTCTACTG AATGGTTCAG CTTTTACAGA AGATTTGAGA 335 TGCAATAGAG TTCGTCTTTT TGTAAATTTA TTGGACATT- GTTGTACAAA CTCCCAAAGT 16173 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| TGCAATAGAG TTCGTCTTTT TGTAAATTTA TTGGACATTG GTTGTACAAA CTCCCAAAGT 395 TGGTTGAACA AAATTAATTG ATGTTATATC ATATGTATCT AGCCTCCAC- AAAAATAAAT 16232 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| TGGTTGAACA AAATTAATTG ATGTTATATC ATATGTATCT AGCCTCCACA AAAAATAAAT 455 TGGAGATGTA TGGTTAAAAT TTCCACTATA TTTGGTGATA AATAAATGTG GCTTTTAATA 16292 |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| TGGAGATGTA TGGTTAAAAT TTCCCCTATA TTTGGTGATA AATAAATGTG GCTTTTAATA 515 TT 16294 || TT 517 hqPGS_C08HBa0235H18.1+_SGN-E395189+ (15215 15316,15420 15515,15978 16294) ******************************************************************************** EST sequence 440 +strand 527 n (File: SGN-E294184+) 1 AAATATAAAC TTTAGATTCT TAAAAACAAA GCTGAATTAT ATGGAGGCAA ATAAGTCTAT 61 GGTGAAGTTG GTTGCTTTCT TGATAATTCT TGTATCATCA TGCTTTCAAT CTCTCACTGC 121 TCAAGATTTG GAAATCGAAG TTAGCGATGG CTTAAATGTA TTGCAAGTAC ATGATGTGTC 181 TCAATCTTTT TGTCCAGGTG TGACAAAGGA AAGTTGGCCA GAACTTCTTG GAACACCAGC 241 TAAGTTTGCA AAGCAAATAA TTCAAAAGGA AAATCCAAAA TTAACAAATG TTGAAACTCT 301 ACTGAATGGT TCAGCTTTTA CAGAAGATTT GAGATGCAAT AGAGTTCGTC TTTTTGTAAA 361 TTTATTGGAC ATTGTTGTAC AAACTCCCAA AGTTGGTTGA ACAAAATTAA TTGATGTTAT 421 ATCATATGTA TCTAGCCTCC ACAAAAATAA ATTGGAGATG TATGGTTAAA ATTTCCACTA 481 TATTTGGTGA TAAATAAATG TGGCTTTTAA TATTAAAAAA AAAAAAA Predicted gene structure (within gDNA segment 14616 to 17016): Exon 1 15216 15316 ( 101 n); cDNA 1 101 ( 101 n); score: 1.000 Intron 1 15317 15419 ( 103 n); Pd: 0.747 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 15420 15515 ( 96 n); cDNA 102 197 ( 96 n); score: 1.000 Intron 2 15516 15977 ( 462 n); Pd: 0.717 (s: 1.00), Pa: 0.999 (s: 1.00) Exon 3 15978 16296 ( 319 n); cDNA 198 516 ( 319 n); score: 1.000 PPA cDNA 517 527 MATCH C08HBa0235H18.1+ SGN-E294184+ 1.000 516 0.979 C PGS_C08HBa0235H18.1+_SGN-E294184+ (15216 15316,15420 15515,15978 16296) Alignment (genomic DNA sequence = upper lines): AAATATAAAC TTTAGATTCT TAAAAACAAA GCTGAATTAT ATGGAGGCAA ATAAGTCTAT 15275 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATATAAAC TTTAGATTCT TAAAAACAAA GCTGAATTAT ATGGAGGCAA ATAAGTCTAT 60 GGTGAAGTTG GTTGCTTTCT TGATAATTCT TGTATCATCA TGTAATTAAT TGACCATTTA 15335 |||||||||| |||||||||| |||||||||| |||||||||| | GGTGAAGTTG GTTGCTTTCT TGATAATTCT TGTATCATCA T......... .......... 101 TTTCTACTTT ATTAAATTTA TTCACATTTC TTATTTTTAT TTGTTAAAAG AAATTGATTA 15395 .......... .......... .......... .......... .......... .......... 101 ATTATGTAAA TTATTTATGA ACAGGCTTTC AATCTCTCAC TGCTCAAGAT TTGGAAATCG 15455 |||||| |||||||||| |||||||||| |||||||||| .......... .......... ....GCTTTC AATCTCTCAC TGCTCAAGAT TTGGAAATCG 137 AAGTTAGCGA TGGCTTAAAT GTATTGCAAG TACATGATGT GTCTCAATCT TTTTGTCCAG 15515 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTTAGCGA TGGCTTAAAT GTATTGCAAG TACATGATGT GTCTCAATCT TTTTGTCCAG 197 GTTTGGTTTT TATCTCTACC GTCCTTTTTG GATATATATA CACGTACGAC GTCCAACTAA 15575 .......... .......... .......... .......... .......... .......... 197 ATCTAAATAA ATTTTTGGAT CGAATCTTAG GTCGATTATC AGGGTAATAT CTATAGATTC 15635 .......... .......... .......... .......... .......... .......... 197 GAGTGTTGGG GTTGAGGTCA TATCCCAATT TAAATGTCAT GTTTCGAGTT GGGAGTTAGG 15695 .......... .......... .......... .......... .......... .......... 197 GTCAGGTACT AGGTTAAATC CCATGCTCGG ATACTGAGTC TGTTGTCGAG TTATGTCCTA 15755 .......... .......... .......... .......... .......... .......... 197 ATTCACGTGT CGAAATCGAG TTCCGAATGA ATTTTCGATC AGAAACTATT TTCCTACTCT 15815 .......... .......... .......... .......... .......... .......... 197 CTAGCCAAAT ATAAAAGATA TTTTCTAAAA AATATTTTCC TTCGTAGCAA ACACACCATA 15875 .......... .......... .......... .......... .......... .......... 197 ATTAATTATT TTTTTCTCAT ATAAAATAAC TTTTGATTCA TAGTTTTTTA GTCAATGCTC 15935 .......... .......... .......... .......... .......... .......... 197 TTTTATAAAT AATTAGTTGT ATTTTTTTTT TATAAATTAT AGGTGTGACA AAGGAAAGTT 15995 |||||||| |||||||||| .......... .......... .......... .......... ..GTGTGACA AAGGAAAGTT 215 GGCCAGAACT TCTTGGAACA CCAGCTAAGT TTGCAAAGCA AATAATTCAA AAGGAAAATC 16055 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCCAGAACT TCTTGGAACA CCAGCTAAGT TTGCAAAGCA AATAATTCAA AAGGAAAATC 275 CAAAATTAAC AAATGTTGAA ACTCTACTGA ATGGTTCAGC TTTTACAGAA GATTTGAGAT 16115 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAATTAAC AAATGTTGAA ACTCTACTGA ATGGTTCAGC TTTTACAGAA GATTTGAGAT 335 GCAATAGAGT TCGTCTTTTT GTAAATTTAT TGGACATTGT TGTACAAACT CCCAAAGTTG 16175 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAATAGAGT TCGTCTTTTT GTAAATTTAT TGGACATTGT TGTACAAACT CCCAAAGTTG 395 GTTGAACAAA ATTAATTGAT GTTATATCAT ATGTATCTAG CCTCCACAAA AATAAATTGG 16235 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGAACAAA ATTAATTGAT GTTATATCAT ATGTATCTAG CCTCCACAAA AATAAATTGG 455 AGATGTATGG TTAAAATTTC CACTATATTT GGTGATAAAT AAATGTGGCT TTTAATATTA 16295 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATGTATGG TTAAAATTTC CACTATATTT GGTGATAAAT AAATGTGGCT TTTAATATTA 515 A 16296 | A 516 hqPGS_C08HBa0235H18.1+_SGN-E294184+ (15216 15316,15420 15515,15978 16296) ******************************************************************************** EST sequence 162 +strand 573 n (File: SGN-E372772+) 1 AAATATAAAC TTTAGATTCT TAAAAACAAA GCTGAATTAT ATGGAGGCAA ATAAGTCTAT 61 GGTGAAGTTG GTTGCTTTCT TGATAATTCT TGTATCATCA TGCTTTCAAT CTCTCACTGC 121 TCAAGATTTG GAAATCGAAG TTAGCGATGG CTTAAATGTA TTGCAAGTAC ATGATGTGTC 181 TCAATCTTTT TGTCCAGGTG TGACAAAGGA AAGTTGGCCA GAACTTCTTG GAACACCAGC 241 TAAGTTTGCA AAGCAAATAA TTCAAAAGGA AAATCCAAAA TTAACAAATG TTGAAACTCT 301 ACTGAATGGT TCAGCTTTTA CAGAAGATTT GAGATGCAAT AGAGTTCGTC TTTTTGTAAA 361 TTTATTGGAC ATTGTTGTAC AAACTCCCAA AGTTGGTTGA ACAAAATTAA TTGATGTTAT 421 ATCATATGTA TCTAGCCTCC ACAAAAATAA ATTGGAGATG TATGGTTAAA ATTTCCACTA 481 TATTTGGTGA TAAATAAATG TGGCTTTTAA TATTAAAAAA AAAAAAAAAA AAAAAAAAAA 541 AAAAAAAACA AAACACTCGC GGGGGGGCGG GGT Predicted gene structure (within gDNA segment 14616 to 17476): Exon 1 15216 15316 ( 101 n); cDNA 1 101 ( 101 n); score: 1.000 Intron 1 15317 15419 ( 103 n); Pd: 0.747 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 15420 15515 ( 96 n); cDNA 102 197 ( 96 n); score: 1.000 Intron 2 15516 15977 ( 462 n); Pd: 0.717 (s: 1.00), Pa: 0.999 (s: 1.00) Exon 3 15978 16295 ( 318 n); cDNA 198 515 ( 318 n); score: 1.000 PPA cDNA 523 553 MATCH C08HBa0235H18.1+ SGN-E372772+ 1.000 515 0.899 C PGS_C08HBa0235H18.1+_SGN-E372772+ (15216 15316,15420 15515,15978 16295) Alignment (genomic DNA sequence = upper lines): AAATATAAAC TTTAGATTCT TAAAAACAAA GCTGAATTAT ATGGAGGCAA ATAAGTCTAT 15275 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATATAAAC TTTAGATTCT TAAAAACAAA GCTGAATTAT ATGGAGGCAA ATAAGTCTAT 60 GGTGAAGTTG GTTGCTTTCT TGATAATTCT TGTATCATCA TGTAATTAAT TGACCATTTA 15335 |||||||||| |||||||||| |||||||||| |||||||||| | GGTGAAGTTG GTTGCTTTCT TGATAATTCT TGTATCATCA T......... .......... 101 TTTCTACTTT ATTAAATTTA TTCACATTTC TTATTTTTAT TTGTTAAAAG AAATTGATTA 15395 .......... .......... .......... .......... .......... .......... 101 ATTATGTAAA TTATTTATGA ACAGGCTTTC AATCTCTCAC TGCTCAAGAT TTGGAAATCG 15455 |||||| |||||||||| |||||||||| |||||||||| .......... .......... ....GCTTTC AATCTCTCAC TGCTCAAGAT TTGGAAATCG 137 AAGTTAGCGA TGGCTTAAAT GTATTGCAAG TACATGATGT GTCTCAATCT TTTTGTCCAG 15515 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTTAGCGA TGGCTTAAAT GTATTGCAAG TACATGATGT GTCTCAATCT TTTTGTCCAG 197 GTTTGGTTTT TATCTCTACC GTCCTTTTTG GATATATATA CACGTACGAC GTCCAACTAA 15575 .......... .......... .......... .......... .......... .......... 197 ATCTAAATAA ATTTTTGGAT CGAATCTTAG GTCGATTATC AGGGTAATAT CTATAGATTC 15635 .......... .......... .......... .......... .......... .......... 197 GAGTGTTGGG GTTGAGGTCA TATCCCAATT TAAATGTCAT GTTTCGAGTT GGGAGTTAGG 15695 .......... .......... .......... .......... .......... .......... 197 GTCAGGTACT AGGTTAAATC CCATGCTCGG ATACTGAGTC TGTTGTCGAG TTATGTCCTA 15755 .......... .......... .......... .......... .......... .......... 197 ATTCACGTGT CGAAATCGAG TTCCGAATGA ATTTTCGATC AGAAACTATT TTCCTACTCT 15815 .......... .......... .......... .......... .......... .......... 197 CTAGCCAAAT ATAAAAGATA TTTTCTAAAA AATATTTTCC TTCGTAGCAA ACACACCATA 15875 .......... .......... .......... .......... .......... .......... 197 ATTAATTATT TTTTTCTCAT ATAAAATAAC TTTTGATTCA TAGTTTTTTA GTCAATGCTC 15935 .......... .......... .......... .......... .......... .......... 197 TTTTATAAAT AATTAGTTGT ATTTTTTTTT TATAAATTAT AGGTGTGACA AAGGAAAGTT 15995 |||||||| |||||||||| .......... .......... .......... .......... ..GTGTGACA AAGGAAAGTT 215 GGCCAGAACT TCTTGGAACA CCAGCTAAGT TTGCAAAGCA AATAATTCAA AAGGAAAATC 16055 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCCAGAACT TCTTGGAACA CCAGCTAAGT TTGCAAAGCA AATAATTCAA AAGGAAAATC 275 CAAAATTAAC AAATGTTGAA ACTCTACTGA ATGGTTCAGC TTTTACAGAA GATTTGAGAT 16115 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAATTAAC AAATGTTGAA ACTCTACTGA ATGGTTCAGC TTTTACAGAA GATTTGAGAT 335 GCAATAGAGT TCGTCTTTTT GTAAATTTAT TGGACATTGT TGTACAAACT CCCAAAGTTG 16175 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAATAGAGT TCGTCTTTTT GTAAATTTAT TGGACATTGT TGTACAAACT CCCAAAGTTG 395 GTTGAACAAA ATTAATTGAT GTTATATCAT ATGTATCTAG CCTCCACAAA AATAAATTGG 16235 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGAACAAA ATTAATTGAT GTTATATCAT ATGTATCTAG CCTCCACAAA AATAAATTGG 455 AGATGTATGG TTAAAATTTC CACTATATTT GGTGATAAAT AAATGTGGCT TTTAATATTA 16295 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATGTATGG TTAAAATTTC CACTATATTT GGTGATAAAT AAATGTGGCT TTTAATATTA 515 hqPGS_C08HBa0235H18.1+_SGN-E372772+ (15216 15316,15420 15515,15978 16295) ******************************************************************************** EST sequence 265 +strand 511 n (File: SGN-E204130+) 1 AAATATAAAC TTTAGATTCT TAAAAACAAA GCTGAATTAT ATGGAGGCAA ATAAGTCTAT 61 GGTGAAGTTG GTTGCTTTCT TGATAATTCT TGTATCATCA TGCTTTCAAT CTCTCACTGC 121 TCAAGATTTG GAAATCGAAG TTAGCGATGG CTTAAATGTA TTGCAAGTAC ATGATGTGTC 181 TCAATCTTTT TGTCCAGGTG TGACAAAGGA AAGTTGGCCA GAACTTCTTG GAACACCAGC 241 TAAGTTTGCA AAGCAAATAA TTCAAAAGGA AAATCCAAAA TTAACAAATG TTGAAACTCT 301 ACTGAATGGT TCAGCTTTTA CAGAAGATTT GAGATGCAAT AGAGTTCGTC TTTTTGTAAA 361 TTTATTGGAC ATTGTTGTAC AAACTCCCAA AGTTGGTTGA ACAAAATTAA TTGATGTTAT 421 ATCATATGTA TCTAGCCTCC ACAAAAATAA ATTGGAGATG TATGGTTAAA ATTTCCACTA 481 TATTTGGTGA TAAATAAATG TGGCTTTTAA T Predicted gene structure (within gDNA segment 14616 to 16901): Exon 1 15216 15316 ( 101 n); cDNA 1 101 ( 101 n); score: 1.000 Intron 1 15317 15419 ( 103 n); Pd: 0.747 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 15420 15515 ( 96 n); cDNA 102 197 ( 96 n); score: 1.000 Intron 2 15516 15977 ( 462 n); Pd: 0.717 (s: 1.00), Pa: 0.999 (s: 1.00) Exon 3 15978 16291 ( 314 n); cDNA 198 511 ( 314 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E204130+ 1.000 511 1.000 C PGS_C08HBa0235H18.1+_SGN-E204130+ (15216 15316,15420 15515,15978 16291) Alignment (genomic DNA sequence = upper lines): AAATATAAAC TTTAGATTCT TAAAAACAAA GCTGAATTAT ATGGAGGCAA ATAAGTCTAT 15275 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATATAAAC TTTAGATTCT TAAAAACAAA GCTGAATTAT ATGGAGGCAA ATAAGTCTAT 60 GGTGAAGTTG GTTGCTTTCT TGATAATTCT TGTATCATCA TGTAATTAAT TGACCATTTA 15335 |||||||||| |||||||||| |||||||||| |||||||||| | GGTGAAGTTG GTTGCTTTCT TGATAATTCT TGTATCATCA T......... .......... 101 TTTCTACTTT ATTAAATTTA TTCACATTTC TTATTTTTAT TTGTTAAAAG AAATTGATTA 15395 .......... .......... .......... .......... .......... .......... 101 ATTATGTAAA TTATTTATGA ACAGGCTTTC AATCTCTCAC TGCTCAAGAT TTGGAAATCG 15455 |||||| |||||||||| |||||||||| |||||||||| .......... .......... ....GCTTTC AATCTCTCAC TGCTCAAGAT TTGGAAATCG 137 AAGTTAGCGA TGGCTTAAAT GTATTGCAAG TACATGATGT GTCTCAATCT TTTTGTCCAG 15515 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTTAGCGA TGGCTTAAAT GTATTGCAAG TACATGATGT GTCTCAATCT TTTTGTCCAG 197 GTTTGGTTTT TATCTCTACC GTCCTTTTTG GATATATATA CACGTACGAC GTCCAACTAA 15575 .......... .......... .......... .......... .......... .......... 197 ATCTAAATAA ATTTTTGGAT CGAATCTTAG GTCGATTATC AGGGTAATAT CTATAGATTC 15635 .......... .......... .......... .......... .......... .......... 197 GAGTGTTGGG GTTGAGGTCA TATCCCAATT TAAATGTCAT GTTTCGAGTT GGGAGTTAGG 15695 .......... .......... .......... .......... .......... .......... 197 GTCAGGTACT AGGTTAAATC CCATGCTCGG ATACTGAGTC TGTTGTCGAG TTATGTCCTA 15755 .......... .......... .......... .......... .......... .......... 197 ATTCACGTGT CGAAATCGAG TTCCGAATGA ATTTTCGATC AGAAACTATT TTCCTACTCT 15815 .......... .......... .......... .......... .......... .......... 197 CTAGCCAAAT ATAAAAGATA TTTTCTAAAA AATATTTTCC TTCGTAGCAA ACACACCATA 15875 .......... .......... .......... .......... .......... .......... 197 ATTAATTATT TTTTTCTCAT ATAAAATAAC TTTTGATTCA TAGTTTTTTA GTCAATGCTC 15935 .......... .......... .......... .......... .......... .......... 197 TTTTATAAAT AATTAGTTGT ATTTTTTTTT TATAAATTAT AGGTGTGACA AAGGAAAGTT 15995 |||||||| |||||||||| .......... .......... .......... .......... ..GTGTGACA AAGGAAAGTT 215 GGCCAGAACT TCTTGGAACA CCAGCTAAGT TTGCAAAGCA AATAATTCAA AAGGAAAATC 16055 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCCAGAACT TCTTGGAACA CCAGCTAAGT TTGCAAAGCA AATAATTCAA AAGGAAAATC 275 CAAAATTAAC AAATGTTGAA ACTCTACTGA ATGGTTCAGC TTTTACAGAA GATTTGAGAT 16115 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAATTAAC AAATGTTGAA ACTCTACTGA ATGGTTCAGC TTTTACAGAA GATTTGAGAT 335 GCAATAGAGT TCGTCTTTTT GTAAATTTAT TGGACATTGT TGTACAAACT CCCAAAGTTG 16175 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAATAGAGT TCGTCTTTTT GTAAATTTAT TGGACATTGT TGTACAAACT CCCAAAGTTG 395 GTTGAACAAA ATTAATTGAT GTTATATCAT ATGTATCTAG CCTCCACAAA AATAAATTGG 16235 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGAACAAA ATTAATTGAT GTTATATCAT ATGTATCTAG CCTCCACAAA AATAAATTGG 455 AGATGTATGG TTAAAATTTC CACTATATTT GGTGATAAAT AAATGTGGCT TTTAAT 16291 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| AGATGTATGG TTAAAATTTC CACTATATTT GGTGATAAAT AAATGTGGCT TTTAAT 511 hqPGS_C08HBa0235H18.1+_SGN-E204130+ (15216 15316,15420 15515,15978 16291) ******************************************************************************** EST sequence 103 +strand 664 n (File: SGN-E262621+) 1 TTTTGGGAAT GGTGTCTGCG AAAGCAAGAA GTCTAGAGAA TGCTGATGCT TCTGTAGCTG 61 TGAACTCCTC ACAGATGGGT GTTGGTACCA GTGGTAGCGG AAGTTTTGAC TCTCCAACTG 121 TTTCCACTGC CCACACAAAT GGTGCAGCTG GAATAACCCA TCTTGGAGTA GTTGGAAGAG 181 GAGTCAAGAG GGTGCATCTA AACACAACCA CAGAATCTAG TCCAGCGAAA AAACCTGCAT 241 CTGAGCAGCC GTCAGATAAT GGAGATGGCA CTGCCTCTTA AAGCATGTAT TGTTGGTGCT 301 TCAATTAAGT TACGGTTAAC ATTTCAATTT AGCTTATTGA TAACATTGGT GGATTACCTT 361 AGTTTGTTGC ATTCTCTGTT GGTTAGCTGG GAAGTGTGTT GCCACAGATC GCATCAGTTT 421 ATTTCCTTAA ATTAATTACC TTGTATGCAT GTTGACTATT CAAAAAAAAA AAAAAAAACT 481 CGAACTTTAG ATTCTTAAAA CAAAGCTGAA TTATATGGAG GCAAATAAGT CTATGGTGAA 541 AGTGGGTGCT TTCTTGATAA TTCTTGTATC ATCATGCTTT CAATCTCTCA CTGCTCAAGA 601 TTTTGGAATC GAAAGTAGCG ATGGCTTTAA TGTATTGCAA GTACATGATG TGTCTCAATC 661 TTTT Predicted gene structure (within gDNA segment 9803 to 16118): Exon 1 14703 14721 ( 19 n); cDNA 457 475 ( 19 n); score: 0.895 Intron 1 14722 15215 ( 494 n); Pd: 0.935 (s: 0), Pa: 0.000 (s: 0.90) Exon 2 15216 15316 ( 101 n); cDNA 476 575 ( 100 n); score: 0.921 Intron 2 15317 15419 ( 103 n); Pd: 0.747 (s: 0.94), Pa: 1.000 (s: 0.92) Exon 3 15420 15508 ( 89 n); cDNA 576 664 ( 89 n); score: 0.944 MATCH C08HBa0235H18.1+ SGN-E262621+ 0.932 209 0.315 C PGS_C08HBa0235H18.1+_SGN-E262621+ (14703 14721,15216 15316,15420 15508) Alignment (genomic DNA sequence = upper lines): TATTTAAAAA AAAAAAACAG CATCTTTCGT GACCAAAGTT TCTTTCTATA TTTATCAATT 14762 |||| ||||| ||||||| | TATTCAAAAA AAAAAAAAA. .......... .......... .......... .......... 475 CCATTTTTTT TACTTTGACA GTATTTTGTA TACGTTTAAA CATAAAAATT AGGTTTTTCA 14822 .......... .......... .......... .......... .......... .......... 475 TATTACTCGT ATGGATCGAT TAATTTCAAA TATACAAATC AATTCGATTA ACTATTATAT 14882 .......... .......... .......... .......... .......... .......... 475 ACAGTGGAAA TGATGTTTAT GTGACTCGTA ATTGATATTT TAAGCGATCA GAATATTTTA 14942 .......... .......... .......... .......... .......... .......... 475 ATGCATATCT ATTAAGAAAA TACCTATTGA TGCAAAAGTC AACAAAATTA TTTAATTTAT 15002 .......... .......... .......... .......... .......... .......... 475 TTATTTTACG ATCGAAGCAT GAATACATTT ACTAATTAAA GTAAATTGGG AGGAATTGAT 15062 .......... .......... .......... .......... .......... .......... 475 GGACGAGTCA TCAAGCTTAT CAAATGTCAA TCAACATTAA AATAATGTTA GTTTATGGCT 15122 .......... .......... .......... .......... .......... .......... 475 GCTTTTAAAT GAACAAGTGG ATCATGTACA ATTGAGTAAA AAATATCTCC TATAAATATA 15182 .......... .......... .......... .......... .......... .......... 475 TATATCCCTC TAAAACCAAA TAACATAACA CACAAATATA AACTTTAGAT TCTTAAAAAC 15242 ||| |||||||||| |||| ||||| .......... .......... .......... ...AAACTCG AACTTTAGAT TCTT-AAAAC 501 AAAGCTGAAT TATATGGAGG CAAATAAGTC TATGGTGAAG TTGGTTGCTT TCTTGATAAT 15302 |||||||||| |||||||||| |||||||||| ||||||||| ||| ||||| |||||||||| AAAGCTGAAT TATATGGAGG CAAATAAGTC TATGGTGAAA GTGGGTGCTT TCTTGATAAT 561 TCTTGTATCA TCATGTAATT AATTGACCAT TTATTTCTAC TTTATTAAAT TTATTCACAT 15362 |||||||||| |||| TCTTGTATCA TCAT...... .......... .......... .......... .......... 575 TTCTTATTTT TATTTGTTAA AAGAAATTGA TTAATTATGT AAATTATTTA TGAACAGGCT 15422 ||| .......... .......... .......... .......... .......... .......GCT 578 TTCAATCTCT CACTGCTCAA GATTTGGAAA TCGAAGTTAG CGATGGCTTA AATGTATTGC 15482 |||||||||| |||||||||| ||||| | || ||||| ||| ||||||||| |||||||||| TTCAATCTCT CACTGCTCAA GATTTTGGAA TCGAAAGTAG CGATGGCTTT AATGTATTGC 638 AAGTACATGA TGTGTCTCAA TCTTTT 15508 |||||||||| |||||||||| |||||| AAGTACATGA TGTGTCTCAA TCTTTT 664 hqPGS_C08HBa0235H18.1+_SGN-E262621+ (15216 15316,15420 15508) ******************************************************************************** EST sequence 1067 -strand 666 n (File: SGN-E368629-) 1 TTTTTTTTTT TTTTTTTTTT TTTTTTATAA AAACCAATTC AATAACTATT ATTTCCCAAA 61 ATCTGGAAGT TATCATCACA AGAACATCTA CTTCGAATTA CTAAATCTAG AAGTATCTAA 121 GAGCCTAAAA TACATAACAC AGTTAGTCCA TGCCGAAACT TCAAGGCATC AAGACATAAA 181 GAAGAAGATC CAGTCCAAGC TAGAAGCTTT GTTTTATCGA AAAAAGGTGA TTTTTCGAAA 241 AGAGTTTGTT TTATTTTAAA GTATTTTTCG ACTTTAGGAG TCGCCACTTA ATTTTTAAGA 301 AAAATCAAGA AAACTCATTC TCAAAACAAT TTAAACAGAA AAGTCGTTTT GAAAATATTT 361 TTTAGGATTC GGGATTCTTA TTAGCGTCTT AGGAAGGTGT TTAAGGCACC TAAGACACTC 421 CGTTAAATAC GGTTTTCCAA CGACTAACTT ATTTGATTAT TTTTATTTTT ACCCTTTGCA 481 AATTTATTTG AACTTTTATC ACGATTTACT TAGCCAAACT TTGCAAATTT GAGATATTAA 541 TCTTTTAAGA TTCCGTCTTA GTTAAACTTT CTAAGCCTTA ACTCTCTAAG CAGACTTTCA 601 AATTTTAAAC CTCTATCGTT TCAAAACTTC AATTTTTATT TTTTAGTTTC ATAAAGCAAA 661 AGGCGT Predicted gene structure (within gDNA segment 13339 to 18967): Exon 1 14022 14026 ( 5 n); cDNA 211 215 ( 5 n); score: 1.000 Intron 1 14027 16609 (2583 n); Pd: 0.000 (s: 0), Pa: 0.764 (s: 0.54) Exon 2 16610 16984 ( 375 n); cDNA 216 587 ( 372 n); score: 0.756 PPA cDNA 28 1 MATCH C08HBa0235H18.1+ SGN-E368629- 0.756 380 0.571 C PGS_C08HBa0235H18.1+_SGN-E368629- (14022 14026,16610 16984) Alignment (genomic DNA sequence = upper lines): GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA ATGTCCCAAA 14081 ||||| GTTTT..... .......... .......... .......... .......... .......... 215 AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG GGTTTGCCCC 14141 .......... .......... .......... .......... .......... .......... 215 ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT CTGCCTGCAG 14201 .......... .......... .......... .......... .......... .......... 215 CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC CTCGGAGCAT 14261 .......... .......... .......... .......... .......... .......... 215 TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC GCCTATCGGA GTCGATGCCG 14321 .......... .......... .......... .......... .......... .......... 215 CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT GGCAGCATAA GTATAAGTCA 14381 .......... .......... .......... .......... .......... .......... 215 CACAAAGAAG GAAGAAGAGA ACAAAAGAAG ATGTCAAGTA GCCCATGTTT GTTGAAATGT 14441 .......... .......... .......... .......... .......... .......... 215 ATATATGAGG ATAACTTATT TGAAAGCACT TTATATAGGG GTGTGGCGGC TTTTGGCACT 14501 .......... .......... .......... .......... .......... .......... 215 ATGTATATTA ATCATAAATA ACAATATCAT ATTTGACAAA AAACGAATAA TATTAAAATA 14561 .......... .......... .......... .......... .......... .......... 215 CGATATAGTA AAGTGGAGGT GAAAAAAGAA AAAATGTATA AGAGCCGCCT AATAAATAAT 14621 .......... .......... .......... .......... .......... .......... 215 AATTTTATAA ATATAGTACA AGTTCACTTT ATTTGGTGAC AACTTTGTAA CGTGACGGAA 14681 .......... .......... .......... .......... .......... .......... 215 CTTATTTCTC AAAATAAATA TTATTTAAAA AAAAAAAACA GCATCTTTCG TGACCAAAGT 14741 .......... .......... .......... .......... .......... .......... 215 TTCTTTCTAT ATTTATCAAT TCCATTTTTT TTACTTTGAC AGTATTTTGT ATACGTTTAA 14801 .......... .......... .......... .......... .......... .......... 215 ACATAAAAAT TAGGTTTTTC ATATTACTCG TATGGATCGA TTAATTTCAA ATATACAAAT 14861 .......... .......... .......... .......... .......... .......... 215 CAATTCGATT AACTATTATA TACAGTGGAA ATGATGTTTA TGTGACTCGT AATTGATATT 14921 .......... .......... .......... .......... .......... .......... 215 TTAAGCGATC AGAATATTTT AATGCATATC TATTAAGAAA ATACCTATTG ATGCAAAAGT 14981 .......... .......... .......... .......... .......... .......... 215 CAACAAAATT ATTTAATTTA TTTATTTTAC GATCGAAGCA TGAATACATT TACTAATTAA 15041 .......... .......... .......... .......... .......... .......... 215 AGTAAATTGG GAGGAATTGA TGGACGAGTC ATCAAGCTTA TCAAATGTCA ATCAACATTA 15101 .......... .......... .......... .......... .......... .......... 215 AAATAATGTT AGTTTATGGC TGCTTTTAAA TGAACAAGTG GATCATGTAC AATTGAGTAA 15161 .......... .......... .......... .......... .......... .......... 215 AAAATATCTC CTATAAATAT ATATATCCCT CTAAAACCAA ATAACATAAC ACACAAATAT 15221 .......... .......... .......... .......... .......... .......... 215 AAACTTTAGA TTCTTAAAAA CAAAGCTGAA TTATATGGAG GCAAATAAGT CTATGGTGAA 15281 .......... .......... .......... .......... .......... .......... 215 GTTGGTTGCT TTCTTGATAA TTCTTGTATC ATCATGTAAT TAATTGACCA TTTATTTCTA 15341 .......... .......... .......... .......... .......... .......... 215 CTTTATTAAA TTTATTCACA TTTCTTATTT TTATTTGTTA AAAGAAATTG ATTAATTATG 15401 .......... .......... .......... .......... .......... .......... 215 TAAATTATTT ATGAACAGGC TTTCAATCTC TCACTGCTCA AGATTTGGAA ATCGAAGTTA 15461 .......... .......... .......... .......... .......... .......... 215 GCGATGGCTT AAATGTATTG CAAGTACATG ATGTGTCTCA ATCTTTTTGT CCAGGTTTGG 15521 .......... .......... .......... .......... .......... .......... 215 TTTTTATCTC TACCGTCCTT TTTGGATATA TATACACGTA CGACGTCCAA CTAAATCTAA 15581 .......... .......... .......... .......... .......... .......... 215 ATAAATTTTT GGATCGAATC TTAGGTCGAT TATCAGGGTA ATATCTATAG ATTCGAGTGT 15641 .......... .......... .......... .......... .......... .......... 215 TGGGGTTGAG GTCATATCCC AATTTAAATG TCATGTTTCG AGTTGGGAGT TAGGGTCAGG 15701 .......... .......... .......... .......... .......... .......... 215 TACTAGGTTA AATCCCATGC TCGGATACTG AGTCTGTTGT CGAGTTATGT CCTAATTCAC 15761 .......... .......... .......... .......... .......... .......... 215 GTGTCGAAAT CGAGTTCCGA ATGAATTTTC GATCAGAAAC TATTTTCCTA CTCTCTAGCC 15821 .......... .......... .......... .......... .......... .......... 215 AAATATAAAA GATATTTTCT AAAAAATATT TTCCTTCGTA GCAAACACAC CATAATTAAT 15881 .......... .......... .......... .......... .......... .......... 215 TATTTTTTTC TCATATAAAA TAACTTTTGA TTCATAGTTT TTTAGTCAAT GCTCTTTTAT 15941 .......... .......... .......... .......... .......... .......... 215 AAATAATTAG TTGTATTTTT TTTTTATAAA TTATAGGTGT GACAAAGGAA AGTTGGCCAG 16001 .......... .......... .......... .......... .......... .......... 215 AACTTCTTGG AACACCAGCT AAGTTTGCAA AGCAAATAAT TCAAAAGGAA AATCCAAAAT 16061 .......... .......... .......... .......... .......... .......... 215 TAACAAATGT TGAAACTCTA CTGAATGGTT CAGCTTTTAC AGAAGATTTG AGATGCAATA 16121 .......... .......... .......... .......... .......... .......... 215 GAGTTCGTCT TTTTGTAAAT TTATTGGACA TTGTTGTACA AACTCCCAAA GTTGGTTGAA 16181 .......... .......... .......... .......... .......... .......... 215 CAAAATTAAT TGATGTTATA TCATATGTAT CTAGCCTCCA CAAAAATAAA TTGGAGATGT 16241 .......... .......... .......... .......... .......... .......... 215 ATGGTTAAAA TTTCCACTAT ATTTGGTGAT AAATAAATGT GGCTTTTAAT ATTAATATGA 16301 .......... .......... .......... .......... .......... .......... 215 TTTTTGTTAT ATATACAATT ACTTCTACTA TATACCAGTG AAATCTCATT AGCATTGGGA 16361 .......... .......... .......... .......... .......... .......... 215 AGGTGTTACG TACGCAACCT TATCTTATGC TAACTATCAT CAGGGCGGTC TTAACGCTAT 16421 .......... .......... .......... .......... .......... .......... 215 GCAACTAAAG GGGGGTGGGG GGTATTTCTA AGAAAAAATT AATTATAAAT GTTATTTTAA 16481 .......... .......... .......... .......... .......... .......... 215 AAATAATTAT ATGTACTATG AGTGGTATGA TTTCTACAAG GAAATTGCAT ATATAATGAG 16541 .......... .......... .......... .......... .......... .......... 215 TATATCATCT CAATTGTGAC TTTGATGAAA AGTTCTGACT TTTAAGAAAA TTTTGTCTTT 16601 .......... .......... .......... .......... .......... .......... 215 TATGAAAGAT AG-TGACATT TGTTTTATCG AAAAAGGGTG GTGATTTTCG AAAAGAGTTT 16660 || | | | || ||| ||| ||||| || || |||| | || | ........AT CGAAAAAAGG TGATTTTTCG -AAAAGAGT- TTG-TTTTAT TTTAAAG--T 262 GTTTTTAGAC TTTTAGGAGT CGCCACTTAA TTTTTAAGAA AAATCAAGAA AACTTCGTTT 16720 ||||| ||| ||||||||| |||||||||| |||||||||| |||||||||| |||| | | ATTTTTCGAC -TTTAGGAGT CGCCACTTAA TTTTTAAGAA AAATCAAGAA AACTCATTCT 321 CTAAACAACT TAAACAGAAA AAATTGTTTT G-AAACA-TT TTAAGGGTTC GGGATTCCTA 16778 | |||||| | ||||||| || || | ||||| | ||| | || || ||| ||| ||||||| || CAAAACAATT TAAACAG-AA AAGTCGTTTT GAAAATATTT TTTAGGATTC GGGATTCTTA 380 TTAGTATCTT AGGAAGGTG- -TAAGGCACC CAAAACACTC CGTTAACTTA CGGTTTTCCA 16836 |||| |||| ||||||||| ||||||||| || |||||| |||||| || |||||||||| TTAGCGTCTT AGGAAGGTGT TTAAGGCACC TAAGACACTC CGTTAA-ATA CGGTTTTCCA 439 ATGATTAAC- TATTTGATTA TTTTTATTTT TAACCTTTGC AAATTTATTT GAACTTTTAA 16895 | || |||| |||||||||| |||||||||| || ||||||| |||||||||| ||||||||| ACGACTAACT TATTTGATTA TTTTTATTTT TACCCTTTGC AAATTTATTT GAACTTTTAT 499 CATGACTTAC TTAGCCAAAC TTAGCCAATT TTGAAATATT TATTGTTTAT CTTGCCAGTT 16955 || || |||| |||||||||| || | ||| | |||| ||||| || |||| | || | CACGATTTAC TTAGCCAAAC TTTG-CAAAT TTGAGATATT AATCTTTTAA GATTCCGTCT 558 TACGAAACCA TTTCAAAG-T TAAGCTTACT 16984 || || | |||| ||| | | || || TAGTTAAAC- TTTCTAAGCC TTAACTCTCT 587 hqPGS_C08HBa0235H18.1+_SGN-E368629- (16610 16984) ******************************************************************************** EST sequence 1039 -strand 620 n (File: SGN-E238551-) 1 CTATTATTTC CCAAAATCTG GAAGTTATCA TCACAAGAAC ATCTACTTCG AATTACTAAA 61 TCTAAGAGTA TCTAAGAAGC TAAAATACAT AAACAGCTAG TCCATGCCGG AACTTCAAGG 121 CATCAAGACA TGAAGAAGAA GATCCAGTCC AAGCTAGAAG CTTTGTTTTA TCGAAAAAAG 181 GTGATTTTTC GAAAAGAGTT TGTTTTATTT TAAAGTATTT TTCGACTTTA GGAGTCGCCA 241 CTTAATTTTT AAGAAAAATC AAGAAAACTC ATTCTCAAAA CAATTTAAAC AGAAAAGTCG 301 TTTTGAAAAT ATTTTTTAGG ATTCGGGATT CTTATTAGCG TCTTAGGAAG GTGTTTAAGG 361 CACCTAAGAC ACTCCGTTAA ATACGGTTTT CCAACGACTA ACTTATTTGA TTATTTTTAT 421 TTTTACCCTT TGCAAATTTA TTTGAACTTT TATCACGATT TACTTAGCCA AACTTTGCAA 481 ATTTGAGATA TTAATCTTTT AAGATTCCGT CTTAGTTAAA CTTTCTAAGC CTTAACTCTC 541 TAAGCAGACT TTCAAATTTT AAACCTCTAT CGTTTCAAAA CTTCAATTTT TATTTTTTAG 601 TTTCATAAAG CAAAAGGCGT Predicted gene structure (within gDNA segment 14399 to 18967): Exon 1 15420 15424 ( 5 n); cDNA 160 164 ( 5 n); score: 1.000 Intron 1 15425 15515 ( 91 n); Pd: 0.000 (s: 0), Pa: 0.735 (s: 0) Exon 2 15516 15520 ( 5 n); cDNA 165 169 ( 5 n); score: 0.800 Intron 2 15521 16609 (1089 n); Pd: 0.000 (s: 0), Pa: 0.764 (s: 0.54) Exon 3 16610 16984 ( 375 n); cDNA 170 541 ( 372 n); score: 0.756 MATCH C08HBa0235H18.1+ SGN-E238551- 0.756 385 0.621 C PGS_C08HBa0235H18.1+_SGN-E238551- (15420 15424,15516 15520,16610 16984) Alignment (genomic DNA sequence = upper lines): GCTTTCAATC TCTCACTGCT CAAGATTTGG AAATCGAAGT TAGCGATGGC TTAAATGTAT 15479 ||||| GCTTT..... .......... .......... .......... .......... .......... 164 TGCAAGTACA TGATGTGTCT CAATCTTTTT GTCCAGGTTT GGTTTTTATC TCTACCGTCC 15539 |||| .......... .......... .......... ......GTTT T......... .......... 169 TTTTTGGATA TATATACACG TACGACGTCC AACTAAATCT AAATAAATTT TTGGATCGAA 15599 .......... .......... .......... .......... .......... .......... 169 TCTTAGGTCG ATTATCAGGG TAATATCTAT AGATTCGAGT GTTGGGGTTG AGGTCATATC 15659 .......... .......... .......... .......... .......... .......... 169 CCAATTTAAA TGTCATGTTT CGAGTTGGGA GTTAGGGTCA GGTACTAGGT TAAATCCCAT 15719 .......... .......... .......... .......... .......... .......... 169 GCTCGGATAC TGAGTCTGTT GTCGAGTTAT GTCCTAATTC ACGTGTCGAA ATCGAGTTCC 15779 .......... .......... .......... .......... .......... .......... 169 GAATGAATTT TCGATCAGAA ACTATTTTCC TACTCTCTAG CCAAATATAA AAGATATTTT 15839 .......... .......... .......... .......... .......... .......... 169 CTAAAAAATA TTTTCCTTCG TAGCAAACAC ACCATAATTA ATTATTTTTT TCTCATATAA 15899 .......... .......... .......... .......... .......... .......... 169 AATAACTTTT GATTCATAGT TTTTTAGTCA ATGCTCTTTT ATAAATAATT AGTTGTATTT 15959 .......... .......... .......... .......... .......... .......... 169 TTTTTTTATA AATTATAGGT GTGACAAAGG AAAGTTGGCC AGAACTTCTT GGAACACCAG 16019 .......... .......... .......... .......... .......... .......... 169 CTAAGTTTGC AAAGCAAATA ATTCAAAAGG AAAATCCAAA ATTAACAAAT GTTGAAACTC 16079 .......... .......... .......... .......... .......... .......... 169 TACTGAATGG TTCAGCTTTT ACAGAAGATT TGAGATGCAA TAGAGTTCGT CTTTTTGTAA 16139 .......... .......... .......... .......... .......... .......... 169 ATTTATTGGA CATTGTTGTA CAAACTCCCA AAGTTGGTTG AACAAAATTA ATTGATGTTA 16199 .......... .......... .......... .......... .......... .......... 169 TATCATATGT ATCTAGCCTC CACAAAAATA AATTGGAGAT GTATGGTTAA AATTTCCACT 16259 .......... .......... .......... .......... .......... .......... 169 ATATTTGGTG ATAAATAAAT GTGGCTTTTA ATATTAATAT GATTTTTGTT ATATATACAA 16319 .......... .......... .......... .......... .......... .......... 169 TTACTTCTAC TATATACCAG TGAAATCTCA TTAGCATTGG GAAGGTGTTA CGTACGCAAC 16379 .......... .......... .......... .......... .......... .......... 169 CTTATCTTAT GCTAACTATC ATCAGGGCGG TCTTAACGCT ATGCAACTAA AGGGGGGTGG 16439 .......... .......... .......... .......... .......... .......... 169 GGGGTATTTC TAAGAAAAAA TTAATTATAA ATGTTATTTT AAAAATAATT ATATGTACTA 16499 .......... .......... .......... .......... .......... .......... 169 TGAGTGGTAT GATTTCTACA AGGAAATTGC ATATATAATG AGTATATCAT CTCAATTGTG 16559 .......... .......... .......... .......... .......... .......... 169 ACTTTGATGA AAAGTTCTGA CTTTTAAGAA AATTTTGTCT TTTATGAAAG ATAG-TGACA 16618 || | | | .......... .......... .......... .......... .......... ATCGAAAAAA 179 TTTGTTTTAT CGAAAAAGGG TGGTGATTTT CGAAAAGAGT TTGTTTTTAG ACTTTTAGGA 16678 || ||| | || ||||| | | || |||| | || | ||||| | || ||||||| GGTGATTTTT CG-AAAAGAG T-TTG-TTTT ATTTTAAAG- -TATTTTTCG AC-TTTAGGA 233 GTCGCCACTT AATTTTTAAG AAAAATCAAG AAAACTTCGT TTCTAAACAA CTTAAACAGA 16738 |||||||||| |||||||||| |||||||||| |||||| | || |||||| |||||||| GTCGCCACTT AATTTTTAAG AAAAATCAAG AAAACTCATT CTCAAAACAA TTTAAACAG- 292 AAAAATTGTT TTG-AAACA- TTTTAAGGGT TCGGGATTCC TATTAGTATC TTAGGAAGGT 16796 |||| | ||| ||| ||| | |||| ||| | ||||||||| |||||| || |||||||||| AAAAGTCGTT TTGAAAATAT TTTTTAGGAT TCGGGATTCT TATTAGCGTC TTAGGAAGGT 352 G--TAAGGCA CCCAAAACAC TCCGTTAACT TACGGTTTTC CAATGATTAA C-TATTTGAT 16853 | ||||||| || || |||| |||||||| |||||||||| ||| || ||| | |||||||| GTTTAAGGCA CCTAAGACAC TCCGTTAA-A TACGGTTTTC CAACGACTAA CTTATTTGAT 411 TATTTTTATT TTTAACCTTT GCAAATTTAT TTGAACTTTT AACATGACTT ACTTAGCCAA 16913 |||||||||| |||| ||||| |||||||||| |||||||||| | || || || |||||||||| TATTTTTATT TTTACCCTTT GCAAATTTAT TTGAACTTTT ATCACGATTT ACTTAGCCAA 471 ACTTAGCCAA TTTTGAAATA TTTATTGTTT ATCTTGCCAG TTTACGAAAC CATTTCAAAG 16973 |||| | ||| ||||| ||| || || ||| | | || ||| || | |||| ||| ACTTTG-CAA ATTTGAGATA TTAATCTTTT AAGATTCCGT CTTAGTTAAA C-TTTCTAAG 529 -TTAAGCTTA CT 16984 | | || || CCTTAACTCT CT 541 hqPGS_C08HBa0235H18.1+_SGN-E238551- (16610 16984) ******************************************************************************** EST sequence 839 -strand 402 n (File: SGN-E352844-) 1 TTTTTTTTAT AAAAACCAAT TCAATAACTA TTATTTCCCA AAATCTGGAA GTTATCATCA 61 CAAGAACATC TACTTCGAAT TACTAAATCT AAGAGTATCT AAGAAGCTAA AATACATAAA 121 CAGCTAGTCC ATGCCGGAAC TTCAAGGCAT CAAGACATGA AGAAGAAGAT CCAGTCCAAG 181 CTAGAAGCTT TGTTTTATCG AAAAAAGGTG ATTTTTCGAA AAGAGTTTGT TTTATTTTAA 241 AGTATTTTTC GACTTTAGGA GTCGCCACTT AATTTTTAAG AAAAATCAAG AAAACTCATT 301 CTCAAAACAA TTTAAACAGA AAAGTCGTTT TGAAAATATT TTTTAGGATT CGGGATTCTT 361 ATTAGCGTCT TAGGAAGGTG TTTAAGGCAC CTAAGACACT CC Predicted gene structure (within gDNA segment 14129 to 18374): Exon 1 15420 15424 ( 5 n); cDNA 187 191 ( 5 n); score: 1.000 Intron 1 15425 15515 ( 91 n); Pd: 0.000 (s: 0), Pa: 0.735 (s: 0) Exon 2 15516 15520 ( 5 n); cDNA 192 196 ( 5 n); score: 0.800 Intron 2 15521 16609 (1089 n); Pd: 0.000 (s: 0), Pa: 0.764 (s: 0.54) Exon 3 16610 16817 ( 208 n); cDNA 197 402 ( 206 n); score: 0.743 MATCH C08HBa0235H18.1+ SGN-E352844- 0.743 218 0.542 C PGS_C08HBa0235H18.1+_SGN-E352844- (15420 15424,15516 15520,16610 16817) Alignment (genomic DNA sequence = upper lines): GCTTTCAATC TCTCACTGCT CAAGATTTGG AAATCGAAGT TAGCGATGGC TTAAATGTAT 15479 ||||| GCTTT..... .......... .......... .......... .......... .......... 191 TGCAAGTACA TGATGTGTCT CAATCTTTTT GTCCAGGTTT GGTTTTTATC TCTACCGTCC 15539 |||| .......... .......... .......... ......GTTT T......... .......... 196 TTTTTGGATA TATATACACG TACGACGTCC AACTAAATCT AAATAAATTT TTGGATCGAA 15599 .......... .......... .......... .......... .......... .......... 196 TCTTAGGTCG ATTATCAGGG TAATATCTAT AGATTCGAGT GTTGGGGTTG AGGTCATATC 15659 .......... .......... .......... .......... .......... .......... 196 CCAATTTAAA TGTCATGTTT CGAGTTGGGA GTTAGGGTCA GGTACTAGGT TAAATCCCAT 15719 .......... .......... .......... .......... .......... .......... 196 GCTCGGATAC TGAGTCTGTT GTCGAGTTAT GTCCTAATTC ACGTGTCGAA ATCGAGTTCC 15779 .......... .......... .......... .......... .......... .......... 196 GAATGAATTT TCGATCAGAA ACTATTTTCC TACTCTCTAG CCAAATATAA AAGATATTTT 15839 .......... .......... .......... .......... .......... .......... 196 CTAAAAAATA TTTTCCTTCG TAGCAAACAC ACCATAATTA ATTATTTTTT TCTCATATAA 15899 .......... .......... .......... .......... .......... .......... 196 AATAACTTTT GATTCATAGT TTTTTAGTCA ATGCTCTTTT ATAAATAATT AGTTGTATTT 15959 .......... .......... .......... .......... .......... .......... 196 TTTTTTTATA AATTATAGGT GTGACAAAGG AAAGTTGGCC AGAACTTCTT GGAACACCAG 16019 .......... .......... .......... .......... .......... .......... 196 CTAAGTTTGC AAAGCAAATA ATTCAAAAGG AAAATCCAAA ATTAACAAAT GTTGAAACTC 16079 .......... .......... .......... .......... .......... .......... 196 TACTGAATGG TTCAGCTTTT ACAGAAGATT TGAGATGCAA TAGAGTTCGT CTTTTTGTAA 16139 .......... .......... .......... .......... .......... .......... 196 ATTTATTGGA CATTGTTGTA CAAACTCCCA AAGTTGGTTG AACAAAATTA ATTGATGTTA 16199 .......... .......... .......... .......... .......... .......... 196 TATCATATGT ATCTAGCCTC CACAAAAATA AATTGGAGAT GTATGGTTAA AATTTCCACT 16259 .......... .......... .......... .......... .......... .......... 196 ATATTTGGTG ATAAATAAAT GTGGCTTTTA ATATTAATAT GATTTTTGTT ATATATACAA 16319 .......... .......... .......... .......... .......... .......... 196 TTACTTCTAC TATATACCAG TGAAATCTCA TTAGCATTGG GAAGGTGTTA CGTACGCAAC 16379 .......... .......... .......... .......... .......... .......... 196 CTTATCTTAT GCTAACTATC ATCAGGGCGG TCTTAACGCT ATGCAACTAA AGGGGGGTGG 16439 .......... .......... .......... .......... .......... .......... 196 GGGGTATTTC TAAGAAAAAA TTAATTATAA ATGTTATTTT AAAAATAATT ATATGTACTA 16499 .......... .......... .......... .......... .......... .......... 196 TGAGTGGTAT GATTTCTACA AGGAAATTGC ATATATAATG AGTATATCAT CTCAATTGTG 16559 .......... .......... .......... .......... .......... .......... 196 ACTTTGATGA AAAGTTCTGA CTTTTAAGAA AATTTTGTCT TTTATGAAAG ATAG-TGACA 16618 || | | | .......... .......... .......... .......... .......... ATCGAAAAAA 206 TTTGTTTTAT CGAAAAAGGG TGGTGATTTT CGAAAAGAGT TTGTTTTTAG ACTTTTAGGA 16678 || ||| | || ||||| | | || |||| | || | ||||| | || ||||||| GGTGATTTTT CG-AAAAGAG T-TTG-TTTT ATTTTAAAG- -TATTTTTCG AC-TTTAGGA 260 GTCGCCACTT AATTTTTAAG AAAAATCAAG AAAACTTCGT TTCTAAACAA CTTAAACAGA 16738 |||||||||| |||||||||| |||||||||| |||||| | || |||||| |||||||| GTCGCCACTT AATTTTTAAG AAAAATCAAG AAAACTCATT CTCAAAACAA TTTAAACAG- 319 AAAAATTGTT TTG-AAACA- TTTTAAGGGT TCGGGATTCC TATTAGTATC TTAGGAAGGT 16796 |||| | ||| ||| ||| | |||| ||| | ||||||||| |||||| || |||||||||| AAAAGTCGTT TTGAAAATAT TTTTTAGGAT TCGGGATTCT TATTAGCGTC TTAGGAAGGT 379 G--TAAGGCA CCCAAAACAC TCC 16817 | ||||||| || || |||| ||| GTTTAAGGCA CCTAAGACAC TCC 402 hqPGS_C08HBa0235H18.1+_SGN-E352844- (16610 16817) ******************************************************************************** EST sequence 1050 -strand 455 n (File: SGN-E238621-) 1 GAGTTTGTTT TTAGACTTTT AGGAGTCGCC ACTTAATTTT TAAGAAAAAT CAAGAAAACT 61 TCGTTTCTAA ACAACTTAAA CAGAAAAATT GTTTTGAAAC ATTTTAAGGG TTCAAGATTC 121 CTATTAGTAT CTTAAGAAGG TGTAAGGCAC CTAAGACACT CCGTTAAATA CAGTTTTCCG 181 ACGATTAACT TATTTGACTA TTTTGTTTTA AAGACTTGCG AATTTTGAAC TTCTTAAGAT 241 ATCTAGGAAA ACTTTATAAA TTTGAAACAT TTATTGTTTT AAGATTCCGT TAACATTAAA 301 ACTTTTCGAA CTTTAATTCT AAGTGACTTT CAAATTCGAA CGCCTTTAAA GTTTCGATTT 361 TTTAGTTTCG AGTTTGATAA AGCAAAAGGC GTTTGATGGG GTTTGGATTC TTCTAATCCT 421 AAGCTAACGA CATTTAAAAC AAAAACGTCA ACAAA Predicted gene structure (within gDNA segment 16045 to 20446): Exon 1 16655 17145 ( 491 n); cDNA 1 455 ( 455 n); score: 0.777 MATCH C08HBa0235H18.1+ SGN-E238621- 0.777 491 1.079 C PGS_C08HBa0235H18.1+_SGN-E238621- (16655 17145) Alignment (genomic DNA sequence = upper lines): GAGTTTGTTT TTAGACTTTT AGGAGTCGCC ACTTAATTTT TAAGAAAAAT CAAGAAAACT 16714 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGTTTGTTT TTAGACTTTT AGGAGTCGCC ACTTAATTTT TAAGAAAAAT CAAGAAAACT 60 TCGTTTCTAA ACAACTTAAA CAGAAAAAAT TGTTTTGAAA CATTTTAAGG GTTCGGGATT 16774 |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| |||| |||| TCGTTTCTAA ACAACTTAAA CAG-AAAAAT TGTTTTGAAA CATTTTAAGG GTTCAAGATT 119 CCTATTAGTA TCTTAGGAAG GTGTAAGGCA CCCAAAACAC TCCGTTAACT TACGGTTTTC 16834 |||||||||| ||||| |||| |||||||||| || || |||| |||||||| ||| |||||| CCTATTAGTA TCTTAAGAAG GTGTAAGGCA CCTAAGACAC TCCGTTAA-A TACAGTTTTC 178 CAATGATTAA C-TATTTGAT TATTTTTATT TTTAACCTTT GCAAATTTAT TTGAACTTTT 16893 | | |||||| | ||||||| || |||| || || || || || || | | |||||||| | CGACGATTAA CTTATTTGAC TA-TTTTGTT TTAAAGACTT GCGAA--T-T TTGAACTTCT 234 AACATGACTT ACTTAGCCAA ACTTAGCCAA TTTTGAAATA TTTATTGTTT ATCTTGCCAG 16953 | | || | | ||| || |||| || ||||||| | ||||||| | | || || TA-A-GA--T ATCTAGGAAA ACTT-TATAA ATTTGAAACA TTTATTG--T -T-TT--AAG 283 TTTACGAAAC CATTTCAAAG TTAAGCTTAC TCAAGGTTTT ATCTAAACAA GCCTTACGAA 17013 || || | || || || || ||| || | ||| || | | | ||| | || ATTCCGTTAA CA-TT--AA- --AA-CTT-T TCGAACTTTA AT-TCTAAGT GACTTTCAAA 334 TTTGAAACAA TTTATCATTT AGAAGTTAGT TTTAAAAATT TTTAGGTTTG ATAAAATAAC 17073 || ||| |||| ||| | | || | ||| | || | | ||||| ||||| || TTCGAACGCC TTTAAAGTTT CG-A-TT--T TTT---AGTT TCGA-GTTTG ATAAAGCAAA 386 AGGCGTTCGA TGAGGGTTTG GAGTTTCCTA ATCCTAAGCT AACGGCATTG AAAACAAAAT 17133 ||||||| || || ||||||| || | | ||| |||||||||| |||| |||| ||||||||| AGGCGTTTGA TG-GGGTTTG GATTCTTCTA ATCCTAAGCT AACGACATTT AAAACAAAA- 444 AAGATAAGCA AA 17145 | | | | || || ACG-TCAACA AA 455 hqPGS_C08HBa0235H18.1+_SGN-E238621- (16655 17145) ******************************************************************************** EST sequence 1014 -strand 358 n (File: SGN-E235901-) 1 GAAAACTCAT TCTCAAAACA ATTTAAACAG AAAAGTCGTT TTGAAAATAT TTTTTAGGAT 61 TCGGGATTCT TATTAGCGTC TTAGGAAGGT GTTTAAGGCA CCTAAGACAC TCCGTTAAAT 121 ACGGTTTTCC AACGACTAAC TTATTTGATT ATTTTTATTT TTACCCTTTG CAAATTTATT 181 TGAACTTTTA TCACGATTTA CTTAGCCAAA CTTTGCAAAT TTGAGATATT AATCTTTTAA 241 GATTCCGTCT TAGTTAAACT TTCTAAGCCT TAACTCTCTA AGCAGACTTT CAAATTTTAA 301 ACCTCTATCG TTTCAAAACT TCAATTTTTA TTTTTTAGTT TCATAAAGCA AAAGGCGT Predicted gene structure (within gDNA segment 14826 to 18967): Exon 1 16708 16984 ( 277 n); cDNA 1 279 ( 279 n); score: 0.765 MATCH C08HBa0235H18.1+ SGN-E235901- 0.765 277 0.774 C PGS_C08HBa0235H18.1+_SGN-E235901- (16708 16984) Alignment (genomic DNA sequence = upper lines): GAAAACTTCG TTTCTAAACA ACTTAAACAG AAAAAATTGT TTTG-AAACA TTT-TAAGGG 16765 ||||||| | || ||||| | |||||||| |||| | || |||| ||| | ||| | ||| GAAAACTCAT TCTCAAAACA ATTTAAACAG -AAAAGTCGT TTTGAAAATA TTTTTTAGGA 59 TTCGGGATTC CTATTAGTAT CTTAGGAAGG TG--TAAGGC ACCCAAAACA CTCCGTTAAC 16823 |||||||||| |||||| | |||||||||| || |||||| ||| || ||| ||||||||| TTCGGGATTC TTATTAGCGT CTTAGGAAGG TGTTTAAGGC ACCTAAGACA CTCCGTTAA- 118 TTACGGTTTT CCAATGATTA AC-TATTTGA TTATTTTTAT TTTTAACCTT TGCAAATTTA 16882 ||||||||| |||| || || || ||||||| |||||||||| ||||| |||| |||||||||| ATACGGTTTT CCAACGACTA ACTTATTTGA TTATTTTTAT TTTTACCCTT TGCAAATTTA 178 TTTGAACTTT TAACATGACT TACTTAGCCA AACTTAGCCA ATTTTGAAAT ATTTATTGTT 16942 |||||||||| || || || | |||||||||| ||||| | || | ||||| || ||| || || TTTGAACTTT TATCACGATT TACTTAGCCA AACTTTG-CA AATTTGAGAT ATTAATCTTT 237 TATCTTGCCA GTTTACGAAA CCATTTCAAA G-TTAAGCTT ACT 16984 || | || ||| || | |||| || | | | || || TAAGATTCCG TCTTAGTTAA AC-TTTCTAA GCCTTAACTC TCT 279 hqPGS_C08HBa0235H18.1+_SGN-E235901- (16708 16984) ******************************************************************************** EST sequence 1123 -strand 212 n (File: SGN-E396899-) 1 TCAAGACAAG GAGCAAACAA TTGAAGGGAT CGACACAGAT CAGTATGTTT AAAACTGACA 61 ATTTTTCTGT GGATGCAGGT TTATAGCTTC ACTTCGAAAT CGGCCGAATT CAGGCCACTT 121 GTAGTTCGAT AAGCTTGATT TACCGCACGA TTTCAAAGAA TCAAAAGCCA CCTTGACACC 181 GAATAGGGAA GGTATCGAAA TGCTCGAGAA TA Predicted gene structure (within gDNA segment 18766 to 21132): Exon 1 20427 20532 ( 106 n); cDNA 107 212 ( 106 n); score: 0.972 MATCH C08HBa0235H18.1+ SGN-E396899- 0.972 106 0.500 C PGS_C08HBa0235H18.1+_SGN-E396899- (20427 20532) Alignment (genomic DNA sequence = upper lines): AATTCAGGCC ACTTGTAGTT CGATAAGCTT GATTTACCGC ACGATTTCAA AGAATCAAAA 20486 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTCAGGCC ACTTGTAGTT CGATAAGCTT GATTTACCGC ACGATTTCAA AGAATCAAAA 166 GCCACCTTGA CACCGAATTA TGAAGGTATC GAAATGCTCG AGAATA 20532 |||||||||| |||||||| ||||||||| |||||||||| |||||| GCCACCTTGA CACCGAATAG GGAAGGTATC GAAATGCTCG AGAATA 212 hqPGS_C08HBa0235H18.1+_SGN-E396899- (20427 20532) ******************************************************************************** EST sequence 446 -strand 585 n (File: SGN-E391490-) 1 AGACATTTCG AATTTGCGAC TGGGACAGAA ATTTTTTAGA AGATCTCAAA AAATTCCGAG 61 ATCTGTTCGG TTACAATGGA AAGATGAACA AGATACTAAA CTGGGACAGA AATTATGAGG 121 ATGGCCTCAA AATTTCGTCA TGGGACTTCC CCACAAGTCT GGAATGCCTC TGAAATTCAT 181 TCGACAAGCG TCGGACTCAA AGAAGCTCGT TAAGCCTGAC ATGACATGAC TTGGCATTGA 241 CTTTTTCGAG ATACTATTTC TTAAAAAATT TCTTGCTTCT CTTAAAAATT TCCCTTTTAT 301 ATTTCATCTG TTTTGGCATA AGATATTTTC TTATCTATCA AGAGTCGAGA AATCGGGAAA 361 TCAACCGAGG ACGTCAAGAC AAGGAGCAAA CAATCGAAGG GATCGACACA GATCAGTATG 421 TTTAAAACTG ACAATTTTTC TGTGGATGCA GGTTTATAGC TTCACTTCGA AATCGGCCGA 481 ATTCAGGCCA CTTGTAGTTC GATAAGCTTG ATTTACCGCA CGATTTCAAA GAATCAAAAG 541 CCACCTTGAC ACCGAATTAT GAAGGTATCG AAATGCTCGA GAATA Predicted gene structure (within gDNA segment 15036 to 21132): Exon 1 17082 17117 ( 36 n); cDNA 445 479 ( 35 n); score: 0.583 Intron 1 17118 20426 (3309 n); Pd: 0.470 (s: 0), Pa: 0.000 (s: 1.00) Exon 2 20427 20532 ( 106 n); cDNA 480 585 ( 106 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E391490- 1.000 142 0.243 C PGS_C08HBa0235H18.1+_SGN-E391490- (17082 17117,20427 20532) Alignment (genomic DNA sequence = upper lines): GATGAGGGTT TGGAGTTTCC TAATCCTAAG CTAACGGCAT TGAAAACAAA ATAAGATAAG 17141 |||| |||| | || || | || || | || GATGCAGGTT TATAGCTT-C ACTTCGAAAT CGGCCG.... .......... .......... 479 CAAATAGTAA AGAGAAGGAT AGAGAGAGAG AGATTTGGGT CCAACTCCGG GTTCTGTTAT 17201 .......... .......... .......... .......... .......... .......... 479 CCTTGACCGA ATGTTGGACC CACCTGCCTT TGGGTTTTTT AGCCCATTTC TGTACCTGTC 17261 .......... .......... .......... .......... .......... .......... 479 CTAATCTAAA CATACAAACA TAATATAGAA AACAAAAAAA CGACAAGAGG GCTTAGGCCC 17321 .......... .......... .......... .......... .......... .......... 479 ATTACAAAAT ATGCAAAGTA AAATAAAACG AAAGAAAAGT CTTTTAGTCC ATCGTCTTCA 17381 .......... .......... .......... .......... .......... .......... 479 ATCTCCATGA CCCTTGTCTT TCTACACTTG CTCGTTTTGA TGAATTGACT CGATAAAGTT 17441 .......... .......... .......... .......... .......... .......... 479 CAGAGTCTTC AAGACTCTCT CGAAATGCGA GGAGGATAAT GGGATTCCCA TAATGGACTC 17501 .......... .......... .......... .......... .......... .......... 479 ACGGGGAGTT TTCACATGTC ACAAAAAAAA CGATAAAATG AAGATTGGCA TTTTTAAAAC 17561 .......... .......... .......... .......... .......... .......... 479 TACAATTAGA ATAAGCAAGG TTCTAAAGCA TAACAAGGAT ATCTTTATAA TGCAATACTA 17621 .......... .......... .......... .......... .......... .......... 479 ATTAAATCTT CATGAGAAGC AAAGCCAACA TCCAACAACC TTAATGGTAC TTAGAGATAT 17681 .......... .......... .......... .......... .......... .......... 479 GCAAATCAGT CAACCTAAAT GACACTACAT AACGATACGT AAACTGTGCG GCGAAACCCC 17741 .......... .......... .......... .......... .......... .......... 479 AAGTGTAGTG AAACCTTCAC ACAAAATTGT TGGTAATTTC CAAATTTTAT ATTTAAAGAA 17801 .......... .......... .......... .......... .......... .......... 479 AGGACTTAGC ATGGGATAAA TAACGAATAC AAATAGAGAT GCATCATAAA TTGAGTATCA 17861 .......... .......... .......... .......... .......... .......... 479 ATTAGCCGTT TTGCGCTTCA AACATTTGAA ACAAACTTGA ACCAATCATA AGAGGACAGC 17921 .......... .......... .......... .......... .......... .......... 479 CTCATCAAAT AAAACAGGAT CCCGATCACC TTATCACCCA AACATCTAAC ACACTAAGCG 17981 .......... .......... .......... .......... .......... .......... 479 AAAGGACCAT TCAATCGACC TACTACATGG CTGTGACCTC GGACAGCTAA CACAAGTGGC 18041 .......... .......... .......... .......... .......... .......... 479 CACCAAGATA AAGATGGCCT TTCAAACCAC AGATTTCCAA AATCCACACC ACCCATACGG 18101 .......... .......... .......... .......... .......... .......... 479 CATACAAAAC GAAACTTTCA TGCAAGACGC CTGACAAACA TGATATCTAA ACAAGATAAC 18161 .......... .......... .......... .......... .......... .......... 479 AAGTTTGGGA GATAAATACA TTATAGAGAA TAAACAACCC TCATATATTC TTAAAGCGAT 18221 .......... .......... .......... .......... .......... .......... 479 ACTCGAACCA AAAGCTTGAA GAAGGTTCGA TTGAAAAGAA GCTTACAACT ACAACTCCCG 18281 .......... .......... .......... .......... .......... .......... 479 CGAGATAGAC ATCATGAGCA AGCTTGGACG AGACAACAAG GGAAAATTAC ACTCTAAACA 18341 .......... .......... .......... .......... .......... .......... 479 TACATACATG CATACAAACA ATCCAAGAGC CTGCTTTAAC GAATAGACAT CGATACTCGG 18401 .......... .......... .......... .......... .......... .......... 479 ATTAATGAGT CATTTCACAG AAGCTCTTGC CAATATGTCT TAACAATCTC ATTCCAATCA 18461 .......... .......... .......... .......... .......... .......... 479 TGTGACGAAT AAATAGTGTT CTACGAGATT AAGCTAGCAT ATATTGAAAG TTCTAAATGG 18521 .......... .......... .......... .......... .......... .......... 479 CAAGCAAAGC AGCGACAGTG TTAACAAACC ACAAAGACAA GCTCAACCGA CCATGTATAT 18581 .......... .......... .......... .......... .......... .......... 479 TCACATTTTC GAGTATCTCA ACATGTTCGA CCACAAACTA AGAAAGGGCC AGCAAGTCGA 18641 .......... .......... .......... .......... .......... .......... 479 TTAACAAACA TCACATGTCA TACGGCGAAG GCTCCTCGAA ACAAATACAA AGTCATGACT 18701 .......... .......... .......... .......... .......... .......... 479 AACTCGTGAA GACAAACAGA GAAGCAATGT CGACGAACCA TCACATTGGG ACAGAATCAC 18761 .......... .......... .......... .......... .......... .......... 479 AACGTAAGAC ATATTCCAGA CTTAAACAAC CAAACGAAAT ATGATACCTC ATGTTGACAG 18821 .......... .......... .......... .......... .......... .......... 479 CACCACAAAC CACGACTCAA CTCCATAAAG AAAATTTAAA ATAATAAAGA AAAATGGGAC 18881 .......... .......... .......... .......... .......... .......... 479 ATGTACCTTT CTCGGAGCAG CGGAACAGGG ATGACGGCGA GCAGACGACG ATGACTTCCC 18941 .......... .......... .......... .......... .......... .......... 479 CACGCGACCC ACGGCTAGAC GTTTATCTCG TTTGTTCTTC GTATTGGAGT CCTATTCCCG 19001 .......... .......... .......... .......... .......... .......... 479 AAAAATCCCG ACTGTTTTGC TACACGAACA GGACAGGAAG AAATCTTCTT CAAAGTCTTC 19061 .......... .......... .......... .......... .......... .......... 479 CTAAACCAGA ATTTCTAACC AAATTTTCTA ACTTCTTTTG GTTATCTCAG AAACAATGGA 19121 .......... .......... .......... .......... .......... .......... 479 ATAAACCCAG AATTTCAAAC AACGTTCCCA ACCCAAAATT TCCTAACAAG AGACGGAAGA 19181 .......... .......... .......... .......... .......... .......... 479 AGCAGAGTCT TTTTTTTTCG AAAATTTTCT CAACCAAAAT CCCTAACCCT TTTCTGTGTC 19241 .......... .......... .......... .......... .......... .......... 479 TTTCTTTTCT TTTTCAAAAA TCTCAAATAT CTAACATTCT TTCAACTCCC AAAATTCCCA 19301 .......... .......... .......... .......... .......... .......... 479 GCGCTCCAAG TTCTGCTTTT CCGAATTTTT CGATGAAAAA ATCTCTCACC CCTTTTCTGA 19361 .......... .......... .......... .......... .......... .......... 479 TGAAGAAAAG GGGTATTTAT AGAGGAGAAG AAATAGCCCC CCTTTTCTCC TTTTGAAATC 19421 .......... .......... .......... .......... .......... .......... 479 GAAACTAAAT CCCGTTTCGG TCAAACTTCA CATGGCACAG GCGTGTTGGA GAGGATGAAA 19481 .......... .......... .......... .......... .......... .......... 479 TTGACACCTC GCAGACCTAC TCGACAGCGT ATGGGTCTCT GCGCTTCCGT TTGGTTCACG 19541 .......... .......... .......... .......... .......... .......... 479 CGAAGAGAAA GATGGAAGGA GAAGAGCGTG GGGTTGTTGG AGTCTCTCTG TTTTTCGCGT 19601 .......... .......... .......... .......... .......... .......... 479 GATTTCTGGG GAATTATGGG TTTTTGTCGA GAGGGGAAGG AGAGAGCGAG CGTGGGGGAG 19661 .......... .......... .......... .......... .......... .......... 479 ACGCGGGGAG AGGATAAGAG GAAGGGAGAG AGCGAGGAGA GAGCGTGGGG AGGGGGTCGC 19721 .......... .......... .......... .......... .......... .......... 479 GTGGCTGCGC ATCTGGGAAT TGTTTGGGAA TTTTGGCTTT CTGTTTTGCT GGGTTCGCGT 19781 .......... .......... .......... .......... .......... .......... 479 GGGGTGAGGG GAGAAGAAGG AAAGGGGAAC GGGTCGGGTC GGGTAGGATG GGTTCTGGGT 19841 .......... .......... .......... .......... .......... .......... 479 CGGGTAGGAT GGGTTATGGT GAATTGGGTT GGGCTGGAGA ATAAAAGAAT TGGGTGTTGG 19901 .......... .......... .......... .......... .......... .......... 479 GATTAATTTG TTGGGCTTGT TTTAAAAATG TGTGTTGGGT TGGTATTTTT TAAAAGAAAT 19961 .......... .......... .......... .......... .......... .......... 479 AAAAGGGGAT GTTGGACTGG GTTGAAGAGG ATGGGCGTCT GGGGGGAATT GGGCCTTGAG 20021 .......... .......... .......... .......... .......... .......... 479 TCTGTGGGCT GTTGGGAATA TTGGGTGTAA GGAATTTAGG CAAAATGGGT TGAGGACGAA 20081 .......... .......... .......... .......... .......... .......... 479 AGTGGGCCTC GGAATAAGAG TGGGCTGATG GGTAAAGGAA TGGGTTCAAG ATATACATAT 20141 .......... .......... .......... .......... .......... .......... 479 ATACATATAC ATATATGTAT ATACATATAT GTATATATGT ACATATATTT ATTTTCGCAA 20201 .......... .......... .......... .......... .......... .......... 479 GGTTTATAAA ACTAACTAAC TCATACCGAC GCGGGTCAAA ATTGGGTGTC AACAACTGTC 20261 .......... .......... .......... .......... .......... .......... 479 CCTCATTTTA CTTGGGTGGA TGCAAGCAAC TCGAGGAAAA TGAAGTTGAC CGAACCAATT 20321 .......... .......... .......... .......... .......... .......... 479 TTGACCAACT CCACTCGCCT TCAGGAAGAA GGATTTGTCA AAGAGTTTAG GAATTATGGC 20381 .......... .......... .......... .......... .......... .......... 479 CGAACCCTTG CAAACGGGTC TCCTACATAC CTCAGGCTAT ATGAGAATTC AGGCCACTTG 20441 ||||| |||||||||| .......... .......... .......... .......... .....AATTC AGGCCACTTG 494 TAGTTCGATA AGCTTGATTT ACCGCACGAT TTCAAAGAAT CAAAAGCCAC CTTGACACCG 20501 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGTTCGATA AGCTTGATTT ACCGCACGAT TTCAAAGAAT CAAAAGCCAC CTTGACACCG 554 AATTATGAAG GTATCGAAAT GCTCGAGAAT A 20532 |||||||||| |||||||||| |||||||||| | AATTATGAAG GTATCGAAAT GCTCGAGAAT A 585 hqPGS_C08HBa0235H18.1+_SGN-E391490- (20427 20532) ******************************************************************************** EST sequence 447 -strand 668 n (File: SGN-E391444-) 1 TTTTTACAAT AGAAACTGGG ACAGAATTTT GAGAGGGACT CAAAAATTCT CCAGAAGGAA 61 CCTTCTTTTC AGCGGATCAA ACTAAAGACA TTTCGAATTT GCGACTGGGA CAGAATTTTT 121 TAGAAGATCT CAAAAATTCC GAGATCTGTT CGGTTACAAT GGAAAGATGA ACAAGATACT 181 AAACTGGGAC AGAAATTTTG AGGATGGCCT CAAAATTTCG TCATGGGACT TCCCCACAAG 241 TCTGGAATGC CTCTGAAATT CATTCGACAA GCGTCGGACT CAAAGAAGCT CGTTAAGCCT 301 GACATGACAT GACTTGGCAT TGACTTTTTC GAGATACTAT TTCTTAAAAA ATTTCTTGCT 361 TCTCTTAAAA ATTTCCCTTT TATATTTCAT CTGTTTTGGC ATAAGATATT TTCTTATCTA 421 TCAAGAGTCG AGAAATCGGG AAATCAACCG AGGACGTCAA GACAAGGAGC AAACAATCGA 481 AGGGATCGAC ACAGATCAGT ATGTTTAAAA CTGACAATTT TTCTGTGGAT GCAGGTTTAT 541 AGCTTCACTT CGAAATCGGC CGAATTCAGG CCACTTGTAG TTCGATAAGC TTGATTTACC 601 GCACGATTTC AAAGAATCAA AAGCCACCTT GACACCGAAT TATGAAGGTA TCGAAATGCT 661 CGAGAATA Predicted gene structure (within gDNA segment 14206 to 21132): Exon 1 17082 17117 ( 36 n); cDNA 528 562 ( 35 n); score: 0.583 Intron 1 17118 20426 (3309 n); Pd: 0.470 (s: 0), Pa: 0.000 (s: 1.00) Exon 2 20427 20532 ( 106 n); cDNA 563 668 ( 106 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E391444- 1.000 142 0.213 C PGS_C08HBa0235H18.1+_SGN-E391444- (17082 17117,20427 20532) Alignment (genomic DNA sequence = upper lines): GATGAGGGTT TGGAGTTTCC TAATCCTAAG CTAACGGCAT TGAAAACAAA ATAAGATAAG 17141 |||| |||| | || || | || || | || GATGCAGGTT TATAGCTT-C ACTTCGAAAT CGGCCG.... .......... .......... 562 CAAATAGTAA AGAGAAGGAT AGAGAGAGAG AGATTTGGGT CCAACTCCGG GTTCTGTTAT 17201 .......... .......... .......... .......... .......... .......... 562 CCTTGACCGA ATGTTGGACC CACCTGCCTT TGGGTTTTTT AGCCCATTTC TGTACCTGTC 17261 .......... .......... .......... .......... .......... .......... 562 CTAATCTAAA CATACAAACA TAATATAGAA AACAAAAAAA CGACAAGAGG GCTTAGGCCC 17321 .......... .......... .......... .......... .......... .......... 562 ATTACAAAAT ATGCAAAGTA AAATAAAACG AAAGAAAAGT CTTTTAGTCC ATCGTCTTCA 17381 .......... .......... .......... .......... .......... .......... 562 ATCTCCATGA CCCTTGTCTT TCTACACTTG CTCGTTTTGA TGAATTGACT CGATAAAGTT 17441 .......... .......... .......... .......... .......... .......... 562 CAGAGTCTTC AAGACTCTCT CGAAATGCGA GGAGGATAAT GGGATTCCCA TAATGGACTC 17501 .......... .......... .......... .......... .......... .......... 562 ACGGGGAGTT TTCACATGTC ACAAAAAAAA CGATAAAATG AAGATTGGCA TTTTTAAAAC 17561 .......... .......... .......... .......... .......... .......... 562 TACAATTAGA ATAAGCAAGG TTCTAAAGCA TAACAAGGAT ATCTTTATAA TGCAATACTA 17621 .......... .......... .......... .......... .......... .......... 562 ATTAAATCTT CATGAGAAGC AAAGCCAACA TCCAACAACC TTAATGGTAC TTAGAGATAT 17681 .......... .......... .......... .......... .......... .......... 562 GCAAATCAGT CAACCTAAAT GACACTACAT AACGATACGT AAACTGTGCG GCGAAACCCC 17741 .......... .......... .......... .......... .......... .......... 562 AAGTGTAGTG AAACCTTCAC ACAAAATTGT TGGTAATTTC CAAATTTTAT ATTTAAAGAA 17801 .......... .......... .......... .......... .......... .......... 562 AGGACTTAGC ATGGGATAAA TAACGAATAC AAATAGAGAT GCATCATAAA TTGAGTATCA 17861 .......... .......... .......... .......... .......... .......... 562 ATTAGCCGTT TTGCGCTTCA AACATTTGAA ACAAACTTGA ACCAATCATA AGAGGACAGC 17921 .......... .......... .......... .......... .......... .......... 562 CTCATCAAAT AAAACAGGAT CCCGATCACC TTATCACCCA AACATCTAAC ACACTAAGCG 17981 .......... .......... .......... .......... .......... .......... 562 AAAGGACCAT TCAATCGACC TACTACATGG CTGTGACCTC GGACAGCTAA CACAAGTGGC 18041 .......... .......... .......... .......... .......... .......... 562 CACCAAGATA AAGATGGCCT TTCAAACCAC AGATTTCCAA AATCCACACC ACCCATACGG 18101 .......... .......... .......... .......... .......... .......... 562 CATACAAAAC GAAACTTTCA TGCAAGACGC CTGACAAACA TGATATCTAA ACAAGATAAC 18161 .......... .......... .......... .......... .......... .......... 562 AAGTTTGGGA GATAAATACA TTATAGAGAA TAAACAACCC TCATATATTC TTAAAGCGAT 18221 .......... .......... .......... .......... .......... .......... 562 ACTCGAACCA AAAGCTTGAA GAAGGTTCGA TTGAAAAGAA GCTTACAACT ACAACTCCCG 18281 .......... .......... .......... .......... .......... .......... 562 CGAGATAGAC ATCATGAGCA AGCTTGGACG AGACAACAAG GGAAAATTAC ACTCTAAACA 18341 .......... .......... .......... .......... .......... .......... 562 TACATACATG CATACAAACA ATCCAAGAGC CTGCTTTAAC GAATAGACAT CGATACTCGG 18401 .......... .......... .......... .......... .......... .......... 562 ATTAATGAGT CATTTCACAG AAGCTCTTGC CAATATGTCT TAACAATCTC ATTCCAATCA 18461 .......... .......... .......... .......... .......... .......... 562 TGTGACGAAT AAATAGTGTT CTACGAGATT AAGCTAGCAT ATATTGAAAG TTCTAAATGG 18521 .......... .......... .......... .......... .......... .......... 562 CAAGCAAAGC AGCGACAGTG TTAACAAACC ACAAAGACAA GCTCAACCGA CCATGTATAT 18581 .......... .......... .......... .......... .......... .......... 562 TCACATTTTC GAGTATCTCA ACATGTTCGA CCACAAACTA AGAAAGGGCC AGCAAGTCGA 18641 .......... .......... .......... .......... .......... .......... 562 TTAACAAACA TCACATGTCA TACGGCGAAG GCTCCTCGAA ACAAATACAA AGTCATGACT 18701 .......... .......... .......... .......... .......... .......... 562 AACTCGTGAA GACAAACAGA GAAGCAATGT CGACGAACCA TCACATTGGG ACAGAATCAC 18761 .......... .......... .......... .......... .......... .......... 562 AACGTAAGAC ATATTCCAGA CTTAAACAAC CAAACGAAAT ATGATACCTC ATGTTGACAG 18821 .......... .......... .......... .......... .......... .......... 562 CACCACAAAC CACGACTCAA CTCCATAAAG AAAATTTAAA ATAATAAAGA AAAATGGGAC 18881 .......... .......... .......... .......... .......... .......... 562 ATGTACCTTT CTCGGAGCAG CGGAACAGGG ATGACGGCGA GCAGACGACG ATGACTTCCC 18941 .......... .......... .......... .......... .......... .......... 562 CACGCGACCC ACGGCTAGAC GTTTATCTCG TTTGTTCTTC GTATTGGAGT CCTATTCCCG 19001 .......... .......... .......... .......... .......... .......... 562 AAAAATCCCG ACTGTTTTGC TACACGAACA GGACAGGAAG AAATCTTCTT CAAAGTCTTC 19061 .......... .......... .......... .......... .......... .......... 562 CTAAACCAGA ATTTCTAACC AAATTTTCTA ACTTCTTTTG GTTATCTCAG AAACAATGGA 19121 .......... .......... .......... .......... .......... .......... 562 ATAAACCCAG AATTTCAAAC AACGTTCCCA ACCCAAAATT TCCTAACAAG AGACGGAAGA 19181 .......... .......... .......... .......... .......... .......... 562 AGCAGAGTCT TTTTTTTTCG AAAATTTTCT CAACCAAAAT CCCTAACCCT TTTCTGTGTC 19241 .......... .......... .......... .......... .......... .......... 562 TTTCTTTTCT TTTTCAAAAA TCTCAAATAT CTAACATTCT TTCAACTCCC AAAATTCCCA 19301 .......... .......... .......... .......... .......... .......... 562 GCGCTCCAAG TTCTGCTTTT CCGAATTTTT CGATGAAAAA ATCTCTCACC CCTTTTCTGA 19361 .......... .......... .......... .......... .......... .......... 562 TGAAGAAAAG GGGTATTTAT AGAGGAGAAG AAATAGCCCC CCTTTTCTCC TTTTGAAATC 19421 .......... .......... .......... .......... .......... .......... 562 GAAACTAAAT CCCGTTTCGG TCAAACTTCA CATGGCACAG GCGTGTTGGA GAGGATGAAA 19481 .......... .......... .......... .......... .......... .......... 562 TTGACACCTC GCAGACCTAC TCGACAGCGT ATGGGTCTCT GCGCTTCCGT TTGGTTCACG 19541 .......... .......... .......... .......... .......... .......... 562 CGAAGAGAAA GATGGAAGGA GAAGAGCGTG GGGTTGTTGG AGTCTCTCTG TTTTTCGCGT 19601 .......... .......... .......... .......... .......... .......... 562 GATTTCTGGG GAATTATGGG TTTTTGTCGA GAGGGGAAGG AGAGAGCGAG CGTGGGGGAG 19661 .......... .......... .......... .......... .......... .......... 562 ACGCGGGGAG AGGATAAGAG GAAGGGAGAG AGCGAGGAGA GAGCGTGGGG AGGGGGTCGC 19721 .......... .......... .......... .......... .......... .......... 562 GTGGCTGCGC ATCTGGGAAT TGTTTGGGAA TTTTGGCTTT CTGTTTTGCT GGGTTCGCGT 19781 .......... .......... .......... .......... .......... .......... 562 GGGGTGAGGG GAGAAGAAGG AAAGGGGAAC GGGTCGGGTC GGGTAGGATG GGTTCTGGGT 19841 .......... .......... .......... .......... .......... .......... 562 CGGGTAGGAT GGGTTATGGT GAATTGGGTT GGGCTGGAGA ATAAAAGAAT TGGGTGTTGG 19901 .......... .......... .......... .......... .......... .......... 562 GATTAATTTG TTGGGCTTGT TTTAAAAATG TGTGTTGGGT TGGTATTTTT TAAAAGAAAT 19961 .......... .......... .......... .......... .......... .......... 562 AAAAGGGGAT GTTGGACTGG GTTGAAGAGG ATGGGCGTCT GGGGGGAATT GGGCCTTGAG 20021 .......... .......... .......... .......... .......... .......... 562 TCTGTGGGCT GTTGGGAATA TTGGGTGTAA GGAATTTAGG CAAAATGGGT TGAGGACGAA 20081 .......... .......... .......... .......... .......... .......... 562 AGTGGGCCTC GGAATAAGAG TGGGCTGATG GGTAAAGGAA TGGGTTCAAG ATATACATAT 20141 .......... .......... .......... .......... .......... .......... 562 ATACATATAC ATATATGTAT ATACATATAT GTATATATGT ACATATATTT ATTTTCGCAA 20201 .......... .......... .......... .......... .......... .......... 562 GGTTTATAAA ACTAACTAAC TCATACCGAC GCGGGTCAAA ATTGGGTGTC AACAACTGTC 20261 .......... .......... .......... .......... .......... .......... 562 CCTCATTTTA CTTGGGTGGA TGCAAGCAAC TCGAGGAAAA TGAAGTTGAC CGAACCAATT 20321 .......... .......... .......... .......... .......... .......... 562 TTGACCAACT CCACTCGCCT TCAGGAAGAA GGATTTGTCA AAGAGTTTAG GAATTATGGC 20381 .......... .......... .......... .......... .......... .......... 562 CGAACCCTTG CAAACGGGTC TCCTACATAC CTCAGGCTAT ATGAGAATTC AGGCCACTTG 20441 ||||| |||||||||| .......... .......... .......... .......... .....AATTC AGGCCACTTG 577 TAGTTCGATA AGCTTGATTT ACCGCACGAT TTCAAAGAAT CAAAAGCCAC CTTGACACCG 20501 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGTTCGATA AGCTTGATTT ACCGCACGAT TTCAAAGAAT CAAAAGCCAC CTTGACACCG 637 AATTATGAAG GTATCGAAAT GCTCGAGAAT A 20532 |||||||||| |||||||||| |||||||||| | AATTATGAAG GTATCGAAAT GCTCGAGAAT A 668 hqPGS_C08HBa0235H18.1+_SGN-E391444- (20427 20532) ******************************************************************************** EST sequence 1100 -strand 664 n (File: SGN-E396735-) 1 TACAATAGAA ACTGGGACAG AATTTTGAGA GGGACTCAAA AATTCTCCAG AAGGAACTTT 61 CTCTTCAGCG GATCAAACTA AAGACATTTC GAATTTGCGA CTGGGACAGA ATTTTTTAGA 121 AGATCTCAAA AATTCCGAGA TCTGTTCGGT TACAATGGAA AGATGAACAA GATACTAAAC 181 TGGGACAGAA ATTTTGAGGA TGGCCTCAAA ATTTCGTCAT GGGACTTCCC CACAAGTCTG 241 GAATGCCTCT GAAATTCATT CGACAAGCGT CGGACTCAAA GAAGCTCGTT AAGCCTGACA 301 TGACATGACT TGGCATTGAC TTTTTCGAGA TACTATTTCT TAAAAAATTT CTTGCTTCTC 361 TTAAAAATTT CCCTTTTATA TTTCATCTGT TTTGGCATAA GATATTTTCT TATCTATCAA 421 GAGTCGAGAA ATCGGGAAAT CAACCGAGGA CGTCAAGACA AGGAGCAAAC AATCGAAGGG 481 ATCGACACAG ATCAGTATGT TTAAAACTGA CAATTTTTCT GTGGATGCAG GTTTATAGCT 541 TCACTTCGAA ATCGGCCGAA TTCAGGCCAC TTGTAGTTCG ATAAGCTTGA TTTACCGCAC 601 GATTTCAAAG AATCAAAAGC CACCTTGACA CCGAATTATG AAGGTATCGA AATGCTCGAG 661 AATA Predicted gene structure (within gDNA segment 14246 to 21132): Exon 1 17082 17117 ( 36 n); cDNA 524 558 ( 35 n); score: 0.583 Intron 1 17118 20426 (3309 n); Pd: 0.470 (s: 0), Pa: 0.000 (s: 1.00) Exon 2 20427 20532 ( 106 n); cDNA 559 664 ( 106 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E396735- 1.000 142 0.214 C PGS_C08HBa0235H18.1+_SGN-E396735- (17082 17117,20427 20532) Alignment (genomic DNA sequence = upper lines): GATGAGGGTT TGGAGTTTCC TAATCCTAAG CTAACGGCAT TGAAAACAAA ATAAGATAAG 17141 |||| |||| | || || | || || | || GATGCAGGTT TATAGCTT-C ACTTCGAAAT CGGCCG.... .......... .......... 558 CAAATAGTAA AGAGAAGGAT AGAGAGAGAG AGATTTGGGT CCAACTCCGG GTTCTGTTAT 17201 .......... .......... .......... .......... .......... .......... 558 CCTTGACCGA ATGTTGGACC CACCTGCCTT TGGGTTTTTT AGCCCATTTC TGTACCTGTC 17261 .......... .......... .......... .......... .......... .......... 558 CTAATCTAAA CATACAAACA TAATATAGAA AACAAAAAAA CGACAAGAGG GCTTAGGCCC 17321 .......... .......... .......... .......... .......... .......... 558 ATTACAAAAT ATGCAAAGTA AAATAAAACG AAAGAAAAGT CTTTTAGTCC ATCGTCTTCA 17381 .......... .......... .......... .......... .......... .......... 558 ATCTCCATGA CCCTTGTCTT TCTACACTTG CTCGTTTTGA TGAATTGACT CGATAAAGTT 17441 .......... .......... .......... .......... .......... .......... 558 CAGAGTCTTC AAGACTCTCT CGAAATGCGA GGAGGATAAT GGGATTCCCA TAATGGACTC 17501 .......... .......... .......... .......... .......... .......... 558 ACGGGGAGTT TTCACATGTC ACAAAAAAAA CGATAAAATG AAGATTGGCA TTTTTAAAAC 17561 .......... .......... .......... .......... .......... .......... 558 TACAATTAGA ATAAGCAAGG TTCTAAAGCA TAACAAGGAT ATCTTTATAA TGCAATACTA 17621 .......... .......... .......... .......... .......... .......... 558 ATTAAATCTT CATGAGAAGC AAAGCCAACA TCCAACAACC TTAATGGTAC TTAGAGATAT 17681 .......... .......... .......... .......... .......... .......... 558 GCAAATCAGT CAACCTAAAT GACACTACAT AACGATACGT AAACTGTGCG GCGAAACCCC 17741 .......... .......... .......... .......... .......... .......... 558 AAGTGTAGTG AAACCTTCAC ACAAAATTGT TGGTAATTTC CAAATTTTAT ATTTAAAGAA 17801 .......... .......... .......... .......... .......... .......... 558 AGGACTTAGC ATGGGATAAA TAACGAATAC AAATAGAGAT GCATCATAAA TTGAGTATCA 17861 .......... .......... .......... .......... .......... .......... 558 ATTAGCCGTT TTGCGCTTCA AACATTTGAA ACAAACTTGA ACCAATCATA AGAGGACAGC 17921 .......... .......... .......... .......... .......... .......... 558 CTCATCAAAT AAAACAGGAT CCCGATCACC TTATCACCCA AACATCTAAC ACACTAAGCG 17981 .......... .......... .......... .......... .......... .......... 558 AAAGGACCAT TCAATCGACC TACTACATGG CTGTGACCTC GGACAGCTAA CACAAGTGGC 18041 .......... .......... .......... .......... .......... .......... 558 CACCAAGATA AAGATGGCCT TTCAAACCAC AGATTTCCAA AATCCACACC ACCCATACGG 18101 .......... .......... .......... .......... .......... .......... 558 CATACAAAAC GAAACTTTCA TGCAAGACGC CTGACAAACA TGATATCTAA ACAAGATAAC 18161 .......... .......... .......... .......... .......... .......... 558 AAGTTTGGGA GATAAATACA TTATAGAGAA TAAACAACCC TCATATATTC TTAAAGCGAT 18221 .......... .......... .......... .......... .......... .......... 558 ACTCGAACCA AAAGCTTGAA GAAGGTTCGA TTGAAAAGAA GCTTACAACT ACAACTCCCG 18281 .......... .......... .......... .......... .......... .......... 558 CGAGATAGAC ATCATGAGCA AGCTTGGACG AGACAACAAG GGAAAATTAC ACTCTAAACA 18341 .......... .......... .......... .......... .......... .......... 558 TACATACATG CATACAAACA ATCCAAGAGC CTGCTTTAAC GAATAGACAT CGATACTCGG 18401 .......... .......... .......... .......... .......... .......... 558 ATTAATGAGT CATTTCACAG AAGCTCTTGC CAATATGTCT TAACAATCTC ATTCCAATCA 18461 .......... .......... .......... .......... .......... .......... 558 TGTGACGAAT AAATAGTGTT CTACGAGATT AAGCTAGCAT ATATTGAAAG TTCTAAATGG 18521 .......... .......... .......... .......... .......... .......... 558 CAAGCAAAGC AGCGACAGTG TTAACAAACC ACAAAGACAA GCTCAACCGA CCATGTATAT 18581 .......... .......... .......... .......... .......... .......... 558 TCACATTTTC GAGTATCTCA ACATGTTCGA CCACAAACTA AGAAAGGGCC AGCAAGTCGA 18641 .......... .......... .......... .......... .......... .......... 558 TTAACAAACA TCACATGTCA TACGGCGAAG GCTCCTCGAA ACAAATACAA AGTCATGACT 18701 .......... .......... .......... .......... .......... .......... 558 AACTCGTGAA GACAAACAGA GAAGCAATGT CGACGAACCA TCACATTGGG ACAGAATCAC 18761 .......... .......... .......... .......... .......... .......... 558 AACGTAAGAC ATATTCCAGA CTTAAACAAC CAAACGAAAT ATGATACCTC ATGTTGACAG 18821 .......... .......... .......... .......... .......... .......... 558 CACCACAAAC CACGACTCAA CTCCATAAAG AAAATTTAAA ATAATAAAGA AAAATGGGAC 18881 .......... .......... .......... .......... .......... .......... 558 ATGTACCTTT CTCGGAGCAG CGGAACAGGG ATGACGGCGA GCAGACGACG ATGACTTCCC 18941 .......... .......... .......... .......... .......... .......... 558 CACGCGACCC ACGGCTAGAC GTTTATCTCG TTTGTTCTTC GTATTGGAGT CCTATTCCCG 19001 .......... .......... .......... .......... .......... .......... 558 AAAAATCCCG ACTGTTTTGC TACACGAACA GGACAGGAAG AAATCTTCTT CAAAGTCTTC 19061 .......... .......... .......... .......... .......... .......... 558 CTAAACCAGA ATTTCTAACC AAATTTTCTA ACTTCTTTTG GTTATCTCAG AAACAATGGA 19121 .......... .......... .......... .......... .......... .......... 558 ATAAACCCAG AATTTCAAAC AACGTTCCCA ACCCAAAATT TCCTAACAAG AGACGGAAGA 19181 .......... .......... .......... .......... .......... .......... 558 AGCAGAGTCT TTTTTTTTCG AAAATTTTCT CAACCAAAAT CCCTAACCCT TTTCTGTGTC 19241 .......... .......... .......... .......... .......... .......... 558 TTTCTTTTCT TTTTCAAAAA TCTCAAATAT CTAACATTCT TTCAACTCCC AAAATTCCCA 19301 .......... .......... .......... .......... .......... .......... 558 GCGCTCCAAG TTCTGCTTTT CCGAATTTTT CGATGAAAAA ATCTCTCACC CCTTTTCTGA 19361 .......... .......... .......... .......... .......... .......... 558 TGAAGAAAAG GGGTATTTAT AGAGGAGAAG AAATAGCCCC CCTTTTCTCC TTTTGAAATC 19421 .......... .......... .......... .......... .......... .......... 558 GAAACTAAAT CCCGTTTCGG TCAAACTTCA CATGGCACAG GCGTGTTGGA GAGGATGAAA 19481 .......... .......... .......... .......... .......... .......... 558 TTGACACCTC GCAGACCTAC TCGACAGCGT ATGGGTCTCT GCGCTTCCGT TTGGTTCACG 19541 .......... .......... .......... .......... .......... .......... 558 CGAAGAGAAA GATGGAAGGA GAAGAGCGTG GGGTTGTTGG AGTCTCTCTG TTTTTCGCGT 19601 .......... .......... .......... .......... .......... .......... 558 GATTTCTGGG GAATTATGGG TTTTTGTCGA GAGGGGAAGG AGAGAGCGAG CGTGGGGGAG 19661 .......... .......... .......... .......... .......... .......... 558 ACGCGGGGAG AGGATAAGAG GAAGGGAGAG AGCGAGGAGA GAGCGTGGGG AGGGGGTCGC 19721 .......... .......... .......... .......... .......... .......... 558 GTGGCTGCGC ATCTGGGAAT TGTTTGGGAA TTTTGGCTTT CTGTTTTGCT GGGTTCGCGT 19781 .......... .......... .......... .......... .......... .......... 558 GGGGTGAGGG GAGAAGAAGG AAAGGGGAAC GGGTCGGGTC GGGTAGGATG GGTTCTGGGT 19841 .......... .......... .......... .......... .......... .......... 558 CGGGTAGGAT GGGTTATGGT GAATTGGGTT GGGCTGGAGA ATAAAAGAAT TGGGTGTTGG 19901 .......... .......... .......... .......... .......... .......... 558 GATTAATTTG TTGGGCTTGT TTTAAAAATG TGTGTTGGGT TGGTATTTTT TAAAAGAAAT 19961 .......... .......... .......... .......... .......... .......... 558 AAAAGGGGAT GTTGGACTGG GTTGAAGAGG ATGGGCGTCT GGGGGGAATT GGGCCTTGAG 20021 .......... .......... .......... .......... .......... .......... 558 TCTGTGGGCT GTTGGGAATA TTGGGTGTAA GGAATTTAGG CAAAATGGGT TGAGGACGAA 20081 .......... .......... .......... .......... .......... .......... 558 AGTGGGCCTC GGAATAAGAG TGGGCTGATG GGTAAAGGAA TGGGTTCAAG ATATACATAT 20141 .......... .......... .......... .......... .......... .......... 558 ATACATATAC ATATATGTAT ATACATATAT GTATATATGT ACATATATTT ATTTTCGCAA 20201 .......... .......... .......... .......... .......... .......... 558 GGTTTATAAA ACTAACTAAC TCATACCGAC GCGGGTCAAA ATTGGGTGTC AACAACTGTC 20261 .......... .......... .......... .......... .......... .......... 558 CCTCATTTTA CTTGGGTGGA TGCAAGCAAC TCGAGGAAAA TGAAGTTGAC CGAACCAATT 20321 .......... .......... .......... .......... .......... .......... 558 TTGACCAACT CCACTCGCCT TCAGGAAGAA GGATTTGTCA AAGAGTTTAG GAATTATGGC 20381 .......... .......... .......... .......... .......... .......... 558 CGAACCCTTG CAAACGGGTC TCCTACATAC CTCAGGCTAT ATGAGAATTC AGGCCACTTG 20441 ||||| |||||||||| .......... .......... .......... .......... .....AATTC AGGCCACTTG 573 TAGTTCGATA AGCTTGATTT ACCGCACGAT TTCAAAGAAT CAAAAGCCAC CTTGACACCG 20501 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGTTCGATA AGCTTGATTT ACCGCACGAT TTCAAAGAAT CAAAAGCCAC CTTGACACCG 633 AATTATGAAG GTATCGAAAT GCTCGAGAAT A 20532 |||||||||| |||||||||| |||||||||| | AATTATGAAG GTATCGAAAT GCTCGAGAAT A 664 hqPGS_C08HBa0235H18.1+_SGN-E396735- (20427 20532) ******************************************************************************** EST sequence 1105 -strand 653 n (File: SGN-E395324-) 1 CTGGGACAGA ATTTTGAGAG GGACTCAAAA ATTCTCCAGA AGGAACCTTC TCTTCAGCGG 61 ATCAAACTAA AGACATTTCG AATTTGCGAC TGGGACAGAA TTTTTTAGAA GATCTCAAAA 121 ATTCCGAGAT CTGTTCGGTT ACAATGGAAA GATGAACAAG ATACTAAACT GGGACAGAAA 181 TTTTGAGGAT GGCCTCAAAA TTTCGTCATG GGACTTCCCC ACAAGTCTGG AATGCCTCTG 241 AAATTCATTC GACAAGCGTC GGACTCAAAG AAGCTCGTTA AGCCTGACAT GACATGACTT 301 GGCATTGACT TTTTCGAGAT ACTATTTCTT AAAAAATTTC TTGCTTCTCT TAAAAATTTC 361 CCTTTTATAT TTCATCTGTT TTGGCATAAG ATATTTTCTT ATCTATCAAG AGTCGAGAAA 421 TCGGGAAATC AACCGAGGAC GTCAAGACAA GGAGCAAACA ATCGAAGGGA TCGACACAGA 481 TCAGTATGTT TAAAACTGAC AATTTTTCTG TGGATGCAGG TTTATAGCTT CACTTCGAAA 541 TCGGCCGAAT TCAGGCCACT TGTAGTTCGA TAAGCTTGAT TTACCGCACG ATTTCAAAGA 601 ATCAAAAGCC ACCTTGACAC CGAATTATGA AGGTATCGAA ATGCTCGAGA ATA Predicted gene structure (within gDNA segment 14356 to 21132): Exon 1 17082 17117 ( 36 n); cDNA 513 547 ( 35 n); score: 0.583 Intron 1 17118 20426 (3309 n); Pd: 0.470 (s: 0), Pa: 0.000 (s: 1.00) Exon 2 20427 20532 ( 106 n); cDNA 548 653 ( 106 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E395324- 1.000 142 0.217 C PGS_C08HBa0235H18.1+_SGN-E395324- (17082 17117,20427 20532) Alignment (genomic DNA sequence = upper lines): GATGAGGGTT TGGAGTTTCC TAATCCTAAG CTAACGGCAT TGAAAACAAA ATAAGATAAG 17141 |||| |||| | || || | || || | || GATGCAGGTT TATAGCTT-C ACTTCGAAAT CGGCCG.... .......... .......... 547 CAAATAGTAA AGAGAAGGAT AGAGAGAGAG AGATTTGGGT CCAACTCCGG GTTCTGTTAT 17201 .......... .......... .......... .......... .......... .......... 547 CCTTGACCGA ATGTTGGACC CACCTGCCTT TGGGTTTTTT AGCCCATTTC TGTACCTGTC 17261 .......... .......... .......... .......... .......... .......... 547 CTAATCTAAA CATACAAACA TAATATAGAA AACAAAAAAA CGACAAGAGG GCTTAGGCCC 17321 .......... .......... .......... .......... .......... .......... 547 ATTACAAAAT ATGCAAAGTA AAATAAAACG AAAGAAAAGT CTTTTAGTCC ATCGTCTTCA 17381 .......... .......... .......... .......... .......... .......... 547 ATCTCCATGA CCCTTGTCTT TCTACACTTG CTCGTTTTGA TGAATTGACT CGATAAAGTT 17441 .......... .......... .......... .......... .......... .......... 547 CAGAGTCTTC AAGACTCTCT CGAAATGCGA GGAGGATAAT GGGATTCCCA TAATGGACTC 17501 .......... .......... .......... .......... .......... .......... 547 ACGGGGAGTT TTCACATGTC ACAAAAAAAA CGATAAAATG AAGATTGGCA TTTTTAAAAC 17561 .......... .......... .......... .......... .......... .......... 547 TACAATTAGA ATAAGCAAGG TTCTAAAGCA TAACAAGGAT ATCTTTATAA TGCAATACTA 17621 .......... .......... .......... .......... .......... .......... 547 ATTAAATCTT CATGAGAAGC AAAGCCAACA TCCAACAACC TTAATGGTAC TTAGAGATAT 17681 .......... .......... .......... .......... .......... .......... 547 GCAAATCAGT CAACCTAAAT GACACTACAT AACGATACGT AAACTGTGCG GCGAAACCCC 17741 .......... .......... .......... .......... .......... .......... 547 AAGTGTAGTG AAACCTTCAC ACAAAATTGT TGGTAATTTC CAAATTTTAT ATTTAAAGAA 17801 .......... .......... .......... .......... .......... .......... 547 AGGACTTAGC ATGGGATAAA TAACGAATAC AAATAGAGAT GCATCATAAA TTGAGTATCA 17861 .......... .......... .......... .......... .......... .......... 547 ATTAGCCGTT TTGCGCTTCA AACATTTGAA ACAAACTTGA ACCAATCATA AGAGGACAGC 17921 .......... .......... .......... .......... .......... .......... 547 CTCATCAAAT AAAACAGGAT CCCGATCACC TTATCACCCA AACATCTAAC ACACTAAGCG 17981 .......... .......... .......... .......... .......... .......... 547 AAAGGACCAT TCAATCGACC TACTACATGG CTGTGACCTC GGACAGCTAA CACAAGTGGC 18041 .......... .......... .......... .......... .......... .......... 547 CACCAAGATA AAGATGGCCT TTCAAACCAC AGATTTCCAA AATCCACACC ACCCATACGG 18101 .......... .......... .......... .......... .......... .......... 547 CATACAAAAC GAAACTTTCA TGCAAGACGC CTGACAAACA TGATATCTAA ACAAGATAAC 18161 .......... .......... .......... .......... .......... .......... 547 AAGTTTGGGA GATAAATACA TTATAGAGAA TAAACAACCC TCATATATTC TTAAAGCGAT 18221 .......... .......... .......... .......... .......... .......... 547 ACTCGAACCA AAAGCTTGAA GAAGGTTCGA TTGAAAAGAA GCTTACAACT ACAACTCCCG 18281 .......... .......... .......... .......... .......... .......... 547 CGAGATAGAC ATCATGAGCA AGCTTGGACG AGACAACAAG GGAAAATTAC ACTCTAAACA 18341 .......... .......... .......... .......... .......... .......... 547 TACATACATG CATACAAACA ATCCAAGAGC CTGCTTTAAC GAATAGACAT CGATACTCGG 18401 .......... .......... .......... .......... .......... .......... 547 ATTAATGAGT CATTTCACAG AAGCTCTTGC CAATATGTCT TAACAATCTC ATTCCAATCA 18461 .......... .......... .......... .......... .......... .......... 547 TGTGACGAAT AAATAGTGTT CTACGAGATT AAGCTAGCAT ATATTGAAAG TTCTAAATGG 18521 .......... .......... .......... .......... .......... .......... 547 CAAGCAAAGC AGCGACAGTG TTAACAAACC ACAAAGACAA GCTCAACCGA CCATGTATAT 18581 .......... .......... .......... .......... .......... .......... 547 TCACATTTTC GAGTATCTCA ACATGTTCGA CCACAAACTA AGAAAGGGCC AGCAAGTCGA 18641 .......... .......... .......... .......... .......... .......... 547 TTAACAAACA TCACATGTCA TACGGCGAAG GCTCCTCGAA ACAAATACAA AGTCATGACT 18701 .......... .......... .......... .......... .......... .......... 547 AACTCGTGAA GACAAACAGA GAAGCAATGT CGACGAACCA TCACATTGGG ACAGAATCAC 18761 .......... .......... .......... .......... .......... .......... 547 AACGTAAGAC ATATTCCAGA CTTAAACAAC CAAACGAAAT ATGATACCTC ATGTTGACAG 18821 .......... .......... .......... .......... .......... .......... 547 CACCACAAAC CACGACTCAA CTCCATAAAG AAAATTTAAA ATAATAAAGA AAAATGGGAC 18881 .......... .......... .......... .......... .......... .......... 547 ATGTACCTTT CTCGGAGCAG CGGAACAGGG ATGACGGCGA GCAGACGACG ATGACTTCCC 18941 .......... .......... .......... .......... .......... .......... 547 CACGCGACCC ACGGCTAGAC GTTTATCTCG TTTGTTCTTC GTATTGGAGT CCTATTCCCG 19001 .......... .......... .......... .......... .......... .......... 547 AAAAATCCCG ACTGTTTTGC TACACGAACA GGACAGGAAG AAATCTTCTT CAAAGTCTTC 19061 .......... .......... .......... .......... .......... .......... 547 CTAAACCAGA ATTTCTAACC AAATTTTCTA ACTTCTTTTG GTTATCTCAG AAACAATGGA 19121 .......... .......... .......... .......... .......... .......... 547 ATAAACCCAG AATTTCAAAC AACGTTCCCA ACCCAAAATT TCCTAACAAG AGACGGAAGA 19181 .......... .......... .......... .......... .......... .......... 547 AGCAGAGTCT TTTTTTTTCG AAAATTTTCT CAACCAAAAT CCCTAACCCT TTTCTGTGTC 19241 .......... .......... .......... .......... .......... .......... 547 TTTCTTTTCT TTTTCAAAAA TCTCAAATAT CTAACATTCT TTCAACTCCC AAAATTCCCA 19301 .......... .......... .......... .......... .......... .......... 547 GCGCTCCAAG TTCTGCTTTT CCGAATTTTT CGATGAAAAA ATCTCTCACC CCTTTTCTGA 19361 .......... .......... .......... .......... .......... .......... 547 TGAAGAAAAG GGGTATTTAT AGAGGAGAAG AAATAGCCCC CCTTTTCTCC TTTTGAAATC 19421 .......... .......... .......... .......... .......... .......... 547 GAAACTAAAT CCCGTTTCGG TCAAACTTCA CATGGCACAG GCGTGTTGGA GAGGATGAAA 19481 .......... .......... .......... .......... .......... .......... 547 TTGACACCTC GCAGACCTAC TCGACAGCGT ATGGGTCTCT GCGCTTCCGT TTGGTTCACG 19541 .......... .......... .......... .......... .......... .......... 547 CGAAGAGAAA GATGGAAGGA GAAGAGCGTG GGGTTGTTGG AGTCTCTCTG TTTTTCGCGT 19601 .......... .......... .......... .......... .......... .......... 547 GATTTCTGGG GAATTATGGG TTTTTGTCGA GAGGGGAAGG AGAGAGCGAG CGTGGGGGAG 19661 .......... .......... .......... .......... .......... .......... 547 ACGCGGGGAG AGGATAAGAG GAAGGGAGAG AGCGAGGAGA GAGCGTGGGG AGGGGGTCGC 19721 .......... .......... .......... .......... .......... .......... 547 GTGGCTGCGC ATCTGGGAAT TGTTTGGGAA TTTTGGCTTT CTGTTTTGCT GGGTTCGCGT 19781 .......... .......... .......... .......... .......... .......... 547 GGGGTGAGGG GAGAAGAAGG AAAGGGGAAC GGGTCGGGTC GGGTAGGATG GGTTCTGGGT 19841 .......... .......... .......... .......... .......... .......... 547 CGGGTAGGAT GGGTTATGGT GAATTGGGTT GGGCTGGAGA ATAAAAGAAT TGGGTGTTGG 19901 .......... .......... .......... .......... .......... .......... 547 GATTAATTTG TTGGGCTTGT TTTAAAAATG TGTGTTGGGT TGGTATTTTT TAAAAGAAAT 19961 .......... .......... .......... .......... .......... .......... 547 AAAAGGGGAT GTTGGACTGG GTTGAAGAGG ATGGGCGTCT GGGGGGAATT GGGCCTTGAG 20021 .......... .......... .......... .......... .......... .......... 547 TCTGTGGGCT GTTGGGAATA TTGGGTGTAA GGAATTTAGG CAAAATGGGT TGAGGACGAA 20081 .......... .......... .......... .......... .......... .......... 547 AGTGGGCCTC GGAATAAGAG TGGGCTGATG GGTAAAGGAA TGGGTTCAAG ATATACATAT 20141 .......... .......... .......... .......... .......... .......... 547 ATACATATAC ATATATGTAT ATACATATAT GTATATATGT ACATATATTT ATTTTCGCAA 20201 .......... .......... .......... .......... .......... .......... 547 GGTTTATAAA ACTAACTAAC TCATACCGAC GCGGGTCAAA ATTGGGTGTC AACAACTGTC 20261 .......... .......... .......... .......... .......... .......... 547 CCTCATTTTA CTTGGGTGGA TGCAAGCAAC TCGAGGAAAA TGAAGTTGAC CGAACCAATT 20321 .......... .......... .......... .......... .......... .......... 547 TTGACCAACT CCACTCGCCT TCAGGAAGAA GGATTTGTCA AAGAGTTTAG GAATTATGGC 20381 .......... .......... .......... .......... .......... .......... 547 CGAACCCTTG CAAACGGGTC TCCTACATAC CTCAGGCTAT ATGAGAATTC AGGCCACTTG 20441 ||||| |||||||||| .......... .......... .......... .......... .....AATTC AGGCCACTTG 562 TAGTTCGATA AGCTTGATTT ACCGCACGAT TTCAAAGAAT CAAAAGCCAC CTTGACACCG 20501 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGTTCGATA AGCTTGATTT ACCGCACGAT TTCAAAGAAT CAAAAGCCAC CTTGACACCG 622 AATTATGAAG GTATCGAAAT GCTCGAGAAT A 20532 |||||||||| |||||||||| |||||||||| | AATTATGAAG GTATCGAAAT GCTCGAGAAT A 653 hqPGS_C08HBa0235H18.1+_SGN-E395324- (20427 20532) ******************************************************************************** EST sequence 1106 -strand 436 n (File: SGN-E396750-) 1 CCCACAAGTC TGGAATGCCT CTGAAATTCA TTCGACAAGC GTCGGACTCA AAGAAGCTCG 61 TTAAGCCTGA CATGACATGA CTTGGCATTG ACTTTTTCGA GATACTATTT CTTAAAAAAT 121 TTCTTGCTTC TCTTAAAAAT TTCCCTTTTA TATTTCATCT GTTTTGGCAT AAGATATTTT 181 CTTATCTATC AAGAGTCGAG AAATCGGGAA ATCAACCGAG GACGTCAAGA CAAGGAGCAA 241 ACAATCGAAG GGATCGACAC AGATCAGTAT GTTTAAAACT GACAATTTTT CTGTGGATGC 301 AGGTTTATAG CTTCACTTCG AAATCGGCCG AATTCAGGCC ACTTGTAGTT CGATAAGCTT 361 GATTTACCGC ACGATTTCAA AGAATCAAAA GCCACCTTGA CACCGAATTA TGAAGGTATC 421 GAAATGCTCG AGAATA Predicted gene structure (within gDNA segment 15926 to 21132): Exon 1 17082 17117 ( 36 n); cDNA 296 330 ( 35 n); score: 0.583 Intron 1 17118 20426 (3309 n); Pd: 0.470 (s: 0), Pa: 0.000 (s: 1.00) Exon 2 20427 20532 ( 106 n); cDNA 331 436 ( 106 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E396750- 1.000 142 0.326 C PGS_C08HBa0235H18.1+_SGN-E396750- (17082 17117,20427 20532) Alignment (genomic DNA sequence = upper lines): GATGAGGGTT TGGAGTTTCC TAATCCTAAG CTAACGGCAT TGAAAACAAA ATAAGATAAG 17141 |||| |||| | || || | || || | || GATGCAGGTT TATAGCTT-C ACTTCGAAAT CGGCCG.... .......... .......... 330 CAAATAGTAA AGAGAAGGAT AGAGAGAGAG AGATTTGGGT CCAACTCCGG GTTCTGTTAT 17201 .......... .......... .......... .......... .......... .......... 330 CCTTGACCGA ATGTTGGACC CACCTGCCTT TGGGTTTTTT AGCCCATTTC TGTACCTGTC 17261 .......... .......... .......... .......... .......... .......... 330 CTAATCTAAA CATACAAACA TAATATAGAA AACAAAAAAA CGACAAGAGG GCTTAGGCCC 17321 .......... .......... .......... .......... .......... .......... 330 ATTACAAAAT ATGCAAAGTA AAATAAAACG AAAGAAAAGT CTTTTAGTCC ATCGTCTTCA 17381 .......... .......... .......... .......... .......... .......... 330 ATCTCCATGA CCCTTGTCTT TCTACACTTG CTCGTTTTGA TGAATTGACT CGATAAAGTT 17441 .......... .......... .......... .......... .......... .......... 330 CAGAGTCTTC AAGACTCTCT CGAAATGCGA GGAGGATAAT GGGATTCCCA TAATGGACTC 17501 .......... .......... .......... .......... .......... .......... 330 ACGGGGAGTT TTCACATGTC ACAAAAAAAA CGATAAAATG AAGATTGGCA TTTTTAAAAC 17561 .......... .......... .......... .......... .......... .......... 330 TACAATTAGA ATAAGCAAGG TTCTAAAGCA TAACAAGGAT ATCTTTATAA TGCAATACTA 17621 .......... .......... .......... .......... .......... .......... 330 ATTAAATCTT CATGAGAAGC AAAGCCAACA TCCAACAACC TTAATGGTAC TTAGAGATAT 17681 .......... .......... .......... .......... .......... .......... 330 GCAAATCAGT CAACCTAAAT GACACTACAT AACGATACGT AAACTGTGCG GCGAAACCCC 17741 .......... .......... .......... .......... .......... .......... 330 AAGTGTAGTG AAACCTTCAC ACAAAATTGT TGGTAATTTC CAAATTTTAT ATTTAAAGAA 17801 .......... .......... .......... .......... .......... .......... 330 AGGACTTAGC ATGGGATAAA TAACGAATAC AAATAGAGAT GCATCATAAA TTGAGTATCA 17861 .......... .......... .......... .......... .......... .......... 330 ATTAGCCGTT TTGCGCTTCA AACATTTGAA ACAAACTTGA ACCAATCATA AGAGGACAGC 17921 .......... .......... .......... .......... .......... .......... 330 CTCATCAAAT AAAACAGGAT CCCGATCACC TTATCACCCA AACATCTAAC ACACTAAGCG 17981 .......... .......... .......... .......... .......... .......... 330 AAAGGACCAT TCAATCGACC TACTACATGG CTGTGACCTC GGACAGCTAA CACAAGTGGC 18041 .......... .......... .......... .......... .......... .......... 330 CACCAAGATA AAGATGGCCT TTCAAACCAC AGATTTCCAA AATCCACACC ACCCATACGG 18101 .......... .......... .......... .......... .......... .......... 330 CATACAAAAC GAAACTTTCA TGCAAGACGC CTGACAAACA TGATATCTAA ACAAGATAAC 18161 .......... .......... .......... .......... .......... .......... 330 AAGTTTGGGA GATAAATACA TTATAGAGAA TAAACAACCC TCATATATTC TTAAAGCGAT 18221 .......... .......... .......... .......... .......... .......... 330 ACTCGAACCA AAAGCTTGAA GAAGGTTCGA TTGAAAAGAA GCTTACAACT ACAACTCCCG 18281 .......... .......... .......... .......... .......... .......... 330 CGAGATAGAC ATCATGAGCA AGCTTGGACG AGACAACAAG GGAAAATTAC ACTCTAAACA 18341 .......... .......... .......... .......... .......... .......... 330 TACATACATG CATACAAACA ATCCAAGAGC CTGCTTTAAC GAATAGACAT CGATACTCGG 18401 .......... .......... .......... .......... .......... .......... 330 ATTAATGAGT CATTTCACAG AAGCTCTTGC CAATATGTCT TAACAATCTC ATTCCAATCA 18461 .......... .......... .......... .......... .......... .......... 330 TGTGACGAAT AAATAGTGTT CTACGAGATT AAGCTAGCAT ATATTGAAAG TTCTAAATGG 18521 .......... .......... .......... .......... .......... .......... 330 CAAGCAAAGC AGCGACAGTG TTAACAAACC ACAAAGACAA GCTCAACCGA CCATGTATAT 18581 .......... .......... .......... .......... .......... .......... 330 TCACATTTTC GAGTATCTCA ACATGTTCGA CCACAAACTA AGAAAGGGCC AGCAAGTCGA 18641 .......... .......... .......... .......... .......... .......... 330 TTAACAAACA TCACATGTCA TACGGCGAAG GCTCCTCGAA ACAAATACAA AGTCATGACT 18701 .......... .......... .......... .......... .......... .......... 330 AACTCGTGAA GACAAACAGA GAAGCAATGT CGACGAACCA TCACATTGGG ACAGAATCAC 18761 .......... .......... .......... .......... .......... .......... 330 AACGTAAGAC ATATTCCAGA CTTAAACAAC CAAACGAAAT ATGATACCTC ATGTTGACAG 18821 .......... .......... .......... .......... .......... .......... 330 CACCACAAAC CACGACTCAA CTCCATAAAG AAAATTTAAA ATAATAAAGA AAAATGGGAC 18881 .......... .......... .......... .......... .......... .......... 330 ATGTACCTTT CTCGGAGCAG CGGAACAGGG ATGACGGCGA GCAGACGACG ATGACTTCCC 18941 .......... .......... .......... .......... .......... .......... 330 CACGCGACCC ACGGCTAGAC GTTTATCTCG TTTGTTCTTC GTATTGGAGT CCTATTCCCG 19001 .......... .......... .......... .......... .......... .......... 330 AAAAATCCCG ACTGTTTTGC TACACGAACA GGACAGGAAG AAATCTTCTT CAAAGTCTTC 19061 .......... .......... .......... .......... .......... .......... 330 CTAAACCAGA ATTTCTAACC AAATTTTCTA ACTTCTTTTG GTTATCTCAG AAACAATGGA 19121 .......... .......... .......... .......... .......... .......... 330 ATAAACCCAG AATTTCAAAC AACGTTCCCA ACCCAAAATT TCCTAACAAG AGACGGAAGA 19181 .......... .......... .......... .......... .......... .......... 330 AGCAGAGTCT TTTTTTTTCG AAAATTTTCT CAACCAAAAT CCCTAACCCT TTTCTGTGTC 19241 .......... .......... .......... .......... .......... .......... 330 TTTCTTTTCT TTTTCAAAAA TCTCAAATAT CTAACATTCT TTCAACTCCC AAAATTCCCA 19301 .......... .......... .......... .......... .......... .......... 330 GCGCTCCAAG TTCTGCTTTT CCGAATTTTT CGATGAAAAA ATCTCTCACC CCTTTTCTGA 19361 .......... .......... .......... .......... .......... .......... 330 TGAAGAAAAG GGGTATTTAT AGAGGAGAAG AAATAGCCCC CCTTTTCTCC TTTTGAAATC 19421 .......... .......... .......... .......... .......... .......... 330 GAAACTAAAT CCCGTTTCGG TCAAACTTCA CATGGCACAG GCGTGTTGGA GAGGATGAAA 19481 .......... .......... .......... .......... .......... .......... 330 TTGACACCTC GCAGACCTAC TCGACAGCGT ATGGGTCTCT GCGCTTCCGT TTGGTTCACG 19541 .......... .......... .......... .......... .......... .......... 330 CGAAGAGAAA GATGGAAGGA GAAGAGCGTG GGGTTGTTGG AGTCTCTCTG TTTTTCGCGT 19601 .......... .......... .......... .......... .......... .......... 330 GATTTCTGGG GAATTATGGG TTTTTGTCGA GAGGGGAAGG AGAGAGCGAG CGTGGGGGAG 19661 .......... .......... .......... .......... .......... .......... 330 ACGCGGGGAG AGGATAAGAG GAAGGGAGAG AGCGAGGAGA GAGCGTGGGG AGGGGGTCGC 19721 .......... .......... .......... .......... .......... .......... 330 GTGGCTGCGC ATCTGGGAAT TGTTTGGGAA TTTTGGCTTT CTGTTTTGCT GGGTTCGCGT 19781 .......... .......... .......... .......... .......... .......... 330 GGGGTGAGGG GAGAAGAAGG AAAGGGGAAC GGGTCGGGTC GGGTAGGATG GGTTCTGGGT 19841 .......... .......... .......... .......... .......... .......... 330 CGGGTAGGAT GGGTTATGGT GAATTGGGTT GGGCTGGAGA ATAAAAGAAT TGGGTGTTGG 19901 .......... .......... .......... .......... .......... .......... 330 GATTAATTTG TTGGGCTTGT TTTAAAAATG TGTGTTGGGT TGGTATTTTT TAAAAGAAAT 19961 .......... .......... .......... .......... .......... .......... 330 AAAAGGGGAT GTTGGACTGG GTTGAAGAGG ATGGGCGTCT GGGGGGAATT GGGCCTTGAG 20021 .......... .......... .......... .......... .......... .......... 330 TCTGTGGGCT GTTGGGAATA TTGGGTGTAA GGAATTTAGG CAAAATGGGT TGAGGACGAA 20081 .......... .......... .......... .......... .......... .......... 330 AGTGGGCCTC GGAATAAGAG TGGGCTGATG GGTAAAGGAA TGGGTTCAAG ATATACATAT 20141 .......... .......... .......... .......... .......... .......... 330 ATACATATAC ATATATGTAT ATACATATAT GTATATATGT ACATATATTT ATTTTCGCAA 20201 .......... .......... .......... .......... .......... .......... 330 GGTTTATAAA ACTAACTAAC TCATACCGAC GCGGGTCAAA ATTGGGTGTC AACAACTGTC 20261 .......... .......... .......... .......... .......... .......... 330 CCTCATTTTA CTTGGGTGGA TGCAAGCAAC TCGAGGAAAA TGAAGTTGAC CGAACCAATT 20321 .......... .......... .......... .......... .......... .......... 330 TTGACCAACT CCACTCGCCT TCAGGAAGAA GGATTTGTCA AAGAGTTTAG GAATTATGGC 20381 .......... .......... .......... .......... .......... .......... 330 CGAACCCTTG CAAACGGGTC TCCTACATAC CTCAGGCTAT ATGAGAATTC AGGCCACTTG 20441 ||||| |||||||||| .......... .......... .......... .......... .....AATTC AGGCCACTTG 345 TAGTTCGATA AGCTTGATTT ACCGCACGAT TTCAAAGAAT CAAAAGCCAC CTTGACACCG 20501 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGTTCGATA AGCTTGATTT ACCGCACGAT TTCAAAGAAT CAAAAGCCAC CTTGACACCG 405 AATTATGAAG GTATCGAAAT GCTCGAGAAT A 20532 |||||||||| |||||||||| |||||||||| | AATTATGAAG GTATCGAAAT GCTCGAGAAT A 436 hqPGS_C08HBa0235H18.1+_SGN-E396750- (20427 20532) ******************************************************************************** EST sequence 1107 -strand 657 n (File: SGN-E396661-) 1 GAAACTGGGA CAGAATTTTG AGAGGGACTC AAAAATTCTC CAGAAGGAAC CTTCTCTTCA 61 GCGGATCAAA CTAAAGACAT TTCGAATTTG CGACTGGGAC AGAATTTTTT AGAAGATCTC 121 AAAAATTCCG AGATCTGTTC GGTTACAATG GAAAGATGAA CAAGATACTA AACTGGGACA 181 GAAATTTTGA GGATGGCCTC AAAATTTCGT CATGGGACTT CCCCACAAGT CTGGAATGCC 241 TCTGAAATTC ATTCGACAAG CGTCGGACTC AAAGAAGCTC GTTAAGCCTG ACATGACATG 301 ACTTGGCATT GACTTTTTCG AGATACTATT TCTTAAAAAA TTTCTTGCTT CTCTTAAAAA 361 TTTCCCTTTT ATATTTCATC TGTTTTGGCA TAAGATATTT TCTTATCTAT CAAGAGTCGA 421 GAAATCGGGA AATCAACCGA GGACGTCAAG ACAAGGAGCA AACAATCGAA GGGATCGACA 481 CAGATCAGTA TGTTTAAAAC TGACAATTTT TCTGTGGATG CAGGTTTATA GCTTCACTTC 541 GAAATCGGCC GAATTCAGGC CACTTGTAGT TCGATAAGCT TGATTTACCG CACGATTTCA 601 AAGAATCAAA AGCCACCTTG ACACCGAATT ATGAAGGTAT CGAAATGCTC GAGAATA Predicted gene structure (within gDNA segment 14316 to 21132): Exon 1 17082 17117 ( 36 n); cDNA 517 551 ( 35 n); score: 0.583 Intron 1 17118 20426 (3309 n); Pd: 0.470 (s: 0), Pa: 0.000 (s: 1.00) Exon 2 20427 20532 ( 106 n); cDNA 552 657 ( 106 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E396661- 1.000 142 0.216 C PGS_C08HBa0235H18.1+_SGN-E396661- (17082 17117,20427 20532) Alignment (genomic DNA sequence = upper lines): GATGAGGGTT TGGAGTTTCC TAATCCTAAG CTAACGGCAT TGAAAACAAA ATAAGATAAG 17141 |||| |||| | || || | || || | || GATGCAGGTT TATAGCTT-C ACTTCGAAAT CGGCCG.... .......... .......... 551 CAAATAGTAA AGAGAAGGAT AGAGAGAGAG AGATTTGGGT CCAACTCCGG GTTCTGTTAT 17201 .......... .......... .......... .......... .......... .......... 551 CCTTGACCGA ATGTTGGACC CACCTGCCTT TGGGTTTTTT AGCCCATTTC TGTACCTGTC 17261 .......... .......... .......... .......... .......... .......... 551 CTAATCTAAA CATACAAACA TAATATAGAA AACAAAAAAA CGACAAGAGG GCTTAGGCCC 17321 .......... .......... .......... .......... .......... .......... 551 ATTACAAAAT ATGCAAAGTA AAATAAAACG AAAGAAAAGT CTTTTAGTCC ATCGTCTTCA 17381 .......... .......... .......... .......... .......... .......... 551 ATCTCCATGA CCCTTGTCTT TCTACACTTG CTCGTTTTGA TGAATTGACT CGATAAAGTT 17441 .......... .......... .......... .......... .......... .......... 551 CAGAGTCTTC AAGACTCTCT CGAAATGCGA GGAGGATAAT GGGATTCCCA TAATGGACTC 17501 .......... .......... .......... .......... .......... .......... 551 ACGGGGAGTT TTCACATGTC ACAAAAAAAA CGATAAAATG AAGATTGGCA TTTTTAAAAC 17561 .......... .......... .......... .......... .......... .......... 551 TACAATTAGA ATAAGCAAGG TTCTAAAGCA TAACAAGGAT ATCTTTATAA TGCAATACTA 17621 .......... .......... .......... .......... .......... .......... 551 ATTAAATCTT CATGAGAAGC AAAGCCAACA TCCAACAACC TTAATGGTAC TTAGAGATAT 17681 .......... .......... .......... .......... .......... .......... 551 GCAAATCAGT CAACCTAAAT GACACTACAT AACGATACGT AAACTGTGCG GCGAAACCCC 17741 .......... .......... .......... .......... .......... .......... 551 AAGTGTAGTG AAACCTTCAC ACAAAATTGT TGGTAATTTC CAAATTTTAT ATTTAAAGAA 17801 .......... .......... .......... .......... .......... .......... 551 AGGACTTAGC ATGGGATAAA TAACGAATAC AAATAGAGAT GCATCATAAA TTGAGTATCA 17861 .......... .......... .......... .......... .......... .......... 551 ATTAGCCGTT TTGCGCTTCA AACATTTGAA ACAAACTTGA ACCAATCATA AGAGGACAGC 17921 .......... .......... .......... .......... .......... .......... 551 CTCATCAAAT AAAACAGGAT CCCGATCACC TTATCACCCA AACATCTAAC ACACTAAGCG 17981 .......... .......... .......... .......... .......... .......... 551 AAAGGACCAT TCAATCGACC TACTACATGG CTGTGACCTC GGACAGCTAA CACAAGTGGC 18041 .......... .......... .......... .......... .......... .......... 551 CACCAAGATA AAGATGGCCT TTCAAACCAC AGATTTCCAA AATCCACACC ACCCATACGG 18101 .......... .......... .......... .......... .......... .......... 551 CATACAAAAC GAAACTTTCA TGCAAGACGC CTGACAAACA TGATATCTAA ACAAGATAAC 18161 .......... .......... .......... .......... .......... .......... 551 AAGTTTGGGA GATAAATACA TTATAGAGAA TAAACAACCC TCATATATTC TTAAAGCGAT 18221 .......... .......... .......... .......... .......... .......... 551 ACTCGAACCA AAAGCTTGAA GAAGGTTCGA TTGAAAAGAA GCTTACAACT ACAACTCCCG 18281 .......... .......... .......... .......... .......... .......... 551 CGAGATAGAC ATCATGAGCA AGCTTGGACG AGACAACAAG GGAAAATTAC ACTCTAAACA 18341 .......... .......... .......... .......... .......... .......... 551 TACATACATG CATACAAACA ATCCAAGAGC CTGCTTTAAC GAATAGACAT CGATACTCGG 18401 .......... .......... .......... .......... .......... .......... 551 ATTAATGAGT CATTTCACAG AAGCTCTTGC CAATATGTCT TAACAATCTC ATTCCAATCA 18461 .......... .......... .......... .......... .......... .......... 551 TGTGACGAAT AAATAGTGTT CTACGAGATT AAGCTAGCAT ATATTGAAAG TTCTAAATGG 18521 .......... .......... .......... .......... .......... .......... 551 CAAGCAAAGC AGCGACAGTG TTAACAAACC ACAAAGACAA GCTCAACCGA CCATGTATAT 18581 .......... .......... .......... .......... .......... .......... 551 TCACATTTTC GAGTATCTCA ACATGTTCGA CCACAAACTA AGAAAGGGCC AGCAAGTCGA 18641 .......... .......... .......... .......... .......... .......... 551 TTAACAAACA TCACATGTCA TACGGCGAAG GCTCCTCGAA ACAAATACAA AGTCATGACT 18701 .......... .......... .......... .......... .......... .......... 551 AACTCGTGAA GACAAACAGA GAAGCAATGT CGACGAACCA TCACATTGGG ACAGAATCAC 18761 .......... .......... .......... .......... .......... .......... 551 AACGTAAGAC ATATTCCAGA CTTAAACAAC CAAACGAAAT ATGATACCTC ATGTTGACAG 18821 .......... .......... .......... .......... .......... .......... 551 CACCACAAAC CACGACTCAA CTCCATAAAG AAAATTTAAA ATAATAAAGA AAAATGGGAC 18881 .......... .......... .......... .......... .......... .......... 551 ATGTACCTTT CTCGGAGCAG CGGAACAGGG ATGACGGCGA GCAGACGACG ATGACTTCCC 18941 .......... .......... .......... .......... .......... .......... 551 CACGCGACCC ACGGCTAGAC GTTTATCTCG TTTGTTCTTC GTATTGGAGT CCTATTCCCG 19001 .......... .......... .......... .......... .......... .......... 551 AAAAATCCCG ACTGTTTTGC TACACGAACA GGACAGGAAG AAATCTTCTT CAAAGTCTTC 19061 .......... .......... .......... .......... .......... .......... 551 CTAAACCAGA ATTTCTAACC AAATTTTCTA ACTTCTTTTG GTTATCTCAG AAACAATGGA 19121 .......... .......... .......... .......... .......... .......... 551 ATAAACCCAG AATTTCAAAC AACGTTCCCA ACCCAAAATT TCCTAACAAG AGACGGAAGA 19181 .......... .......... .......... .......... .......... .......... 551 AGCAGAGTCT TTTTTTTTCG AAAATTTTCT CAACCAAAAT CCCTAACCCT TTTCTGTGTC 19241 .......... .......... .......... .......... .......... .......... 551 TTTCTTTTCT TTTTCAAAAA TCTCAAATAT CTAACATTCT TTCAACTCCC AAAATTCCCA 19301 .......... .......... .......... .......... .......... .......... 551 GCGCTCCAAG TTCTGCTTTT CCGAATTTTT CGATGAAAAA ATCTCTCACC CCTTTTCTGA 19361 .......... .......... .......... .......... .......... .......... 551 TGAAGAAAAG GGGTATTTAT AGAGGAGAAG AAATAGCCCC CCTTTTCTCC TTTTGAAATC 19421 .......... .......... .......... .......... .......... .......... 551 GAAACTAAAT CCCGTTTCGG TCAAACTTCA CATGGCACAG GCGTGTTGGA GAGGATGAAA 19481 .......... .......... .......... .......... .......... .......... 551 TTGACACCTC GCAGACCTAC TCGACAGCGT ATGGGTCTCT GCGCTTCCGT TTGGTTCACG 19541 .......... .......... .......... .......... .......... .......... 551 CGAAGAGAAA GATGGAAGGA GAAGAGCGTG GGGTTGTTGG AGTCTCTCTG TTTTTCGCGT 19601 .......... .......... .......... .......... .......... .......... 551 GATTTCTGGG GAATTATGGG TTTTTGTCGA GAGGGGAAGG AGAGAGCGAG CGTGGGGGAG 19661 .......... .......... .......... .......... .......... .......... 551 ACGCGGGGAG AGGATAAGAG GAAGGGAGAG AGCGAGGAGA GAGCGTGGGG AGGGGGTCGC 19721 .......... .......... .......... .......... .......... .......... 551 GTGGCTGCGC ATCTGGGAAT TGTTTGGGAA TTTTGGCTTT CTGTTTTGCT GGGTTCGCGT 19781 .......... .......... .......... .......... .......... .......... 551 GGGGTGAGGG GAGAAGAAGG AAAGGGGAAC GGGTCGGGTC GGGTAGGATG GGTTCTGGGT 19841 .......... .......... .......... .......... .......... .......... 551 CGGGTAGGAT GGGTTATGGT GAATTGGGTT GGGCTGGAGA ATAAAAGAAT TGGGTGTTGG 19901 .......... .......... .......... .......... .......... .......... 551 GATTAATTTG TTGGGCTTGT TTTAAAAATG TGTGTTGGGT TGGTATTTTT TAAAAGAAAT 19961 .......... .......... .......... .......... .......... .......... 551 AAAAGGGGAT GTTGGACTGG GTTGAAGAGG ATGGGCGTCT GGGGGGAATT GGGCCTTGAG 20021 .......... .......... .......... .......... .......... .......... 551 TCTGTGGGCT GTTGGGAATA TTGGGTGTAA GGAATTTAGG CAAAATGGGT TGAGGACGAA 20081 .......... .......... .......... .......... .......... .......... 551 AGTGGGCCTC GGAATAAGAG TGGGCTGATG GGTAAAGGAA TGGGTTCAAG ATATACATAT 20141 .......... .......... .......... .......... .......... .......... 551 ATACATATAC ATATATGTAT ATACATATAT GTATATATGT ACATATATTT ATTTTCGCAA 20201 .......... .......... .......... .......... .......... .......... 551 GGTTTATAAA ACTAACTAAC TCATACCGAC GCGGGTCAAA ATTGGGTGTC AACAACTGTC 20261 .......... .......... .......... .......... .......... .......... 551 CCTCATTTTA CTTGGGTGGA TGCAAGCAAC TCGAGGAAAA TGAAGTTGAC CGAACCAATT 20321 .......... .......... .......... .......... .......... .......... 551 TTGACCAACT CCACTCGCCT TCAGGAAGAA GGATTTGTCA AAGAGTTTAG GAATTATGGC 20381 .......... .......... .......... .......... .......... .......... 551 CGAACCCTTG CAAACGGGTC TCCTACATAC CTCAGGCTAT ATGAGAATTC AGGCCACTTG 20441 ||||| |||||||||| .......... .......... .......... .......... .....AATTC AGGCCACTTG 566 TAGTTCGATA AGCTTGATTT ACCGCACGAT TTCAAAGAAT CAAAAGCCAC CTTGACACCG 20501 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGTTCGATA AGCTTGATTT ACCGCACGAT TTCAAAGAAT CAAAAGCCAC CTTGACACCG 626 AATTATGAAG GTATCGAAAT GCTCGAGAAT A 20532 |||||||||| |||||||||| |||||||||| | AATTATGAAG GTATCGAAAT GCTCGAGAAT A 657 hqPGS_C08HBa0235H18.1+_SGN-E396661- (20427 20532) ******************************************************************************** EST sequence 1121 -strand 593 n (File: SGN-E397114-) 1 ATCAAATTAA AGACATTTCG AATTTGCGAC TGGGACAGAA TTTTTTAGAA GATCTCAAAA 61 ATTCCGAGAT CTGTTCGGTT ACAATGGAAA GATGAACAAG ATACTAAACT GGGACAGAAA 121 TTTTGAGGAT GGCCTCAAAA TTTCGTCATG GGACTTCCCC ACAAGTCTGG AATGCCTCTG 181 AAATTCATTC GACAAGCGTC GGACTCAAAG AAGCTCGTTA AGCCTGACAT GACATGACTT 241 GGCATTGACT TTTTCGAGAT ACTATTTCTT AAAAAATTTC TTGCTTCTCT TAAAAATTTC 301 CCTTTTATAT TTCATCTGTT TTGGCATAAG ATATTTTCTT ATCTATCAAG AGTCGAGAAA 361 TCGGGAAATC AACCGAGGAC GTCAAGACAA GGAGCAAACA ATCGAAGGGA TCGACACAGA 421 TCAGTATGTT TAAAACTGAC AATTTTTCTG TGGATGCAGG TTTATAGCTT CACTTCGAAA 481 TCGGCCGAAT TCAGGCCACT TGTAGTTCGA TAAGCTTGAT TTACCGCACG ATTTCAAAGA 541 ATCAAAAGCC ACCTTGACAC CGAATTATGA AGGTATCGAA ATGCTCGAGA ATA Predicted gene structure (within gDNA segment 14956 to 21132): Exon 1 17082 17117 ( 36 n); cDNA 453 487 ( 35 n); score: 0.583 Intron 1 17118 20426 (3309 n); Pd: 0.470 (s: 0), Pa: 0.000 (s: 1.00) Exon 2 20427 20532 ( 106 n); cDNA 488 593 ( 106 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E397114- 1.000 142 0.239 C PGS_C08HBa0235H18.1+_SGN-E397114- (17082 17117,20427 20532) Alignment (genomic DNA sequence = upper lines): GATGAGGGTT TGGAGTTTCC TAATCCTAAG CTAACGGCAT TGAAAACAAA ATAAGATAAG 17141 |||| |||| | || || | || || | || GATGCAGGTT TATAGCTT-C ACTTCGAAAT CGGCCG.... .......... .......... 487 CAAATAGTAA AGAGAAGGAT AGAGAGAGAG AGATTTGGGT CCAACTCCGG GTTCTGTTAT 17201 .......... .......... .......... .......... .......... .......... 487 CCTTGACCGA ATGTTGGACC CACCTGCCTT TGGGTTTTTT AGCCCATTTC TGTACCTGTC 17261 .......... .......... .......... .......... .......... .......... 487 CTAATCTAAA CATACAAACA TAATATAGAA AACAAAAAAA CGACAAGAGG GCTTAGGCCC 17321 .......... .......... .......... .......... .......... .......... 487 ATTACAAAAT ATGCAAAGTA AAATAAAACG AAAGAAAAGT CTTTTAGTCC ATCGTCTTCA 17381 .......... .......... .......... .......... .......... .......... 487 ATCTCCATGA CCCTTGTCTT TCTACACTTG CTCGTTTTGA TGAATTGACT CGATAAAGTT 17441 .......... .......... .......... .......... .......... .......... 487 CAGAGTCTTC AAGACTCTCT CGAAATGCGA GGAGGATAAT GGGATTCCCA TAATGGACTC 17501 .......... .......... .......... .......... .......... .......... 487 ACGGGGAGTT TTCACATGTC ACAAAAAAAA CGATAAAATG AAGATTGGCA TTTTTAAAAC 17561 .......... .......... .......... .......... .......... .......... 487 TACAATTAGA ATAAGCAAGG TTCTAAAGCA TAACAAGGAT ATCTTTATAA TGCAATACTA 17621 .......... .......... .......... .......... .......... .......... 487 ATTAAATCTT CATGAGAAGC AAAGCCAACA TCCAACAACC TTAATGGTAC TTAGAGATAT 17681 .......... .......... .......... .......... .......... .......... 487 GCAAATCAGT CAACCTAAAT GACACTACAT AACGATACGT AAACTGTGCG GCGAAACCCC 17741 .......... .......... .......... .......... .......... .......... 487 AAGTGTAGTG AAACCTTCAC ACAAAATTGT TGGTAATTTC CAAATTTTAT ATTTAAAGAA 17801 .......... .......... .......... .......... .......... .......... 487 AGGACTTAGC ATGGGATAAA TAACGAATAC AAATAGAGAT GCATCATAAA TTGAGTATCA 17861 .......... .......... .......... .......... .......... .......... 487 ATTAGCCGTT TTGCGCTTCA AACATTTGAA ACAAACTTGA ACCAATCATA AGAGGACAGC 17921 .......... .......... .......... .......... .......... .......... 487 CTCATCAAAT AAAACAGGAT CCCGATCACC TTATCACCCA AACATCTAAC ACACTAAGCG 17981 .......... .......... .......... .......... .......... .......... 487 AAAGGACCAT TCAATCGACC TACTACATGG CTGTGACCTC GGACAGCTAA CACAAGTGGC 18041 .......... .......... .......... .......... .......... .......... 487 CACCAAGATA AAGATGGCCT TTCAAACCAC AGATTTCCAA AATCCACACC ACCCATACGG 18101 .......... .......... .......... .......... .......... .......... 487 CATACAAAAC GAAACTTTCA TGCAAGACGC CTGACAAACA TGATATCTAA ACAAGATAAC 18161 .......... .......... .......... .......... .......... .......... 487 AAGTTTGGGA GATAAATACA TTATAGAGAA TAAACAACCC TCATATATTC TTAAAGCGAT 18221 .......... .......... .......... .......... .......... .......... 487 ACTCGAACCA AAAGCTTGAA GAAGGTTCGA TTGAAAAGAA GCTTACAACT ACAACTCCCG 18281 .......... .......... .......... .......... .......... .......... 487 CGAGATAGAC ATCATGAGCA AGCTTGGACG AGACAACAAG GGAAAATTAC ACTCTAAACA 18341 .......... .......... .......... .......... .......... .......... 487 TACATACATG CATACAAACA ATCCAAGAGC CTGCTTTAAC GAATAGACAT CGATACTCGG 18401 .......... .......... .......... .......... .......... .......... 487 ATTAATGAGT CATTTCACAG AAGCTCTTGC CAATATGTCT TAACAATCTC ATTCCAATCA 18461 .......... .......... .......... .......... .......... .......... 487 TGTGACGAAT AAATAGTGTT CTACGAGATT AAGCTAGCAT ATATTGAAAG TTCTAAATGG 18521 .......... .......... .......... .......... .......... .......... 487 CAAGCAAAGC AGCGACAGTG TTAACAAACC ACAAAGACAA GCTCAACCGA CCATGTATAT 18581 .......... .......... .......... .......... .......... .......... 487 TCACATTTTC GAGTATCTCA ACATGTTCGA CCACAAACTA AGAAAGGGCC AGCAAGTCGA 18641 .......... .......... .......... .......... .......... .......... 487 TTAACAAACA TCACATGTCA TACGGCGAAG GCTCCTCGAA ACAAATACAA AGTCATGACT 18701 .......... .......... .......... .......... .......... .......... 487 AACTCGTGAA GACAAACAGA GAAGCAATGT CGACGAACCA TCACATTGGG ACAGAATCAC 18761 .......... .......... .......... .......... .......... .......... 487 AACGTAAGAC ATATTCCAGA CTTAAACAAC CAAACGAAAT ATGATACCTC ATGTTGACAG 18821 .......... .......... .......... .......... .......... .......... 487 CACCACAAAC CACGACTCAA CTCCATAAAG AAAATTTAAA ATAATAAAGA AAAATGGGAC 18881 .......... .......... .......... .......... .......... .......... 487 ATGTACCTTT CTCGGAGCAG CGGAACAGGG ATGACGGCGA GCAGACGACG ATGACTTCCC 18941 .......... .......... .......... .......... .......... .......... 487 CACGCGACCC ACGGCTAGAC GTTTATCTCG TTTGTTCTTC GTATTGGAGT CCTATTCCCG 19001 .......... .......... .......... .......... .......... .......... 487 AAAAATCCCG ACTGTTTTGC TACACGAACA GGACAGGAAG AAATCTTCTT CAAAGTCTTC 19061 .......... .......... .......... .......... .......... .......... 487 CTAAACCAGA ATTTCTAACC AAATTTTCTA ACTTCTTTTG GTTATCTCAG AAACAATGGA 19121 .......... .......... .......... .......... .......... .......... 487 ATAAACCCAG AATTTCAAAC AACGTTCCCA ACCCAAAATT TCCTAACAAG AGACGGAAGA 19181 .......... .......... .......... .......... .......... .......... 487 AGCAGAGTCT TTTTTTTTCG AAAATTTTCT CAACCAAAAT CCCTAACCCT TTTCTGTGTC 19241 .......... .......... .......... .......... .......... .......... 487 TTTCTTTTCT TTTTCAAAAA TCTCAAATAT CTAACATTCT TTCAACTCCC AAAATTCCCA 19301 .......... .......... .......... .......... .......... .......... 487 GCGCTCCAAG TTCTGCTTTT CCGAATTTTT CGATGAAAAA ATCTCTCACC CCTTTTCTGA 19361 .......... .......... .......... .......... .......... .......... 487 TGAAGAAAAG GGGTATTTAT AGAGGAGAAG AAATAGCCCC CCTTTTCTCC TTTTGAAATC 19421 .......... .......... .......... .......... .......... .......... 487 GAAACTAAAT CCCGTTTCGG TCAAACTTCA CATGGCACAG GCGTGTTGGA GAGGATGAAA 19481 .......... .......... .......... .......... .......... .......... 487 TTGACACCTC GCAGACCTAC TCGACAGCGT ATGGGTCTCT GCGCTTCCGT TTGGTTCACG 19541 .......... .......... .......... .......... .......... .......... 487 CGAAGAGAAA GATGGAAGGA GAAGAGCGTG GGGTTGTTGG AGTCTCTCTG TTTTTCGCGT 19601 .......... .......... .......... .......... .......... .......... 487 GATTTCTGGG GAATTATGGG TTTTTGTCGA GAGGGGAAGG AGAGAGCGAG CGTGGGGGAG 19661 .......... .......... .......... .......... .......... .......... 487 ACGCGGGGAG AGGATAAGAG GAAGGGAGAG AGCGAGGAGA GAGCGTGGGG AGGGGGTCGC 19721 .......... .......... .......... .......... .......... .......... 487 GTGGCTGCGC ATCTGGGAAT TGTTTGGGAA TTTTGGCTTT CTGTTTTGCT GGGTTCGCGT 19781 .......... .......... .......... .......... .......... .......... 487 GGGGTGAGGG GAGAAGAAGG AAAGGGGAAC GGGTCGGGTC GGGTAGGATG GGTTCTGGGT 19841 .......... .......... .......... .......... .......... .......... 487 CGGGTAGGAT GGGTTATGGT GAATTGGGTT GGGCTGGAGA ATAAAAGAAT TGGGTGTTGG 19901 .......... .......... .......... .......... .......... .......... 487 GATTAATTTG TTGGGCTTGT TTTAAAAATG TGTGTTGGGT TGGTATTTTT TAAAAGAAAT 19961 .......... .......... .......... .......... .......... .......... 487 AAAAGGGGAT GTTGGACTGG GTTGAAGAGG ATGGGCGTCT GGGGGGAATT GGGCCTTGAG 20021 .......... .......... .......... .......... .......... .......... 487 TCTGTGGGCT GTTGGGAATA TTGGGTGTAA GGAATTTAGG CAAAATGGGT TGAGGACGAA 20081 .......... .......... .......... .......... .......... .......... 487 AGTGGGCCTC GGAATAAGAG TGGGCTGATG GGTAAAGGAA TGGGTTCAAG ATATACATAT 20141 .......... .......... .......... .......... .......... .......... 487 ATACATATAC ATATATGTAT ATACATATAT GTATATATGT ACATATATTT ATTTTCGCAA 20201 .......... .......... .......... .......... .......... .......... 487 GGTTTATAAA ACTAACTAAC TCATACCGAC GCGGGTCAAA ATTGGGTGTC AACAACTGTC 20261 .......... .......... .......... .......... .......... .......... 487 CCTCATTTTA CTTGGGTGGA TGCAAGCAAC TCGAGGAAAA TGAAGTTGAC CGAACCAATT 20321 .......... .......... .......... .......... .......... .......... 487 TTGACCAACT CCACTCGCCT TCAGGAAGAA GGATTTGTCA AAGAGTTTAG GAATTATGGC 20381 .......... .......... .......... .......... .......... .......... 487 CGAACCCTTG CAAACGGGTC TCCTACATAC CTCAGGCTAT ATGAGAATTC AGGCCACTTG 20441 ||||| |||||||||| .......... .......... .......... .......... .....AATTC AGGCCACTTG 502 TAGTTCGATA AGCTTGATTT ACCGCACGAT TTCAAAGAAT CAAAAGCCAC CTTGACACCG 20501 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGTTCGATA AGCTTGATTT ACCGCACGAT TTCAAAGAAT CAAAAGCCAC CTTGACACCG 562 AATTATGAAG GTATCGAAAT GCTCGAGAAT A 20532 |||||||||| |||||||||| |||||||||| | AATTATGAAG GTATCGAAAT GCTCGAGAAT A 593 hqPGS_C08HBa0235H18.1+_SGN-E397114- (20427 20532) ******************************************************************************** EST sequence 1122 -strand 662 n (File: SGN-E390817-) 1 CAATAGAAAC GGGGACAGAA TTTTGAGAGG GACTCAAAAA TTCTCCAGAA GGAACNTTCT 61 CTTCAGCGGA TCAAACTAAA GACATTTCGA ATTTGCGACT GGGACAGAAT TTTTTAGAAG 121 ATCTCAAAAA TTCCGAGATC TGTTCGGTTA CAATGGAAAG ATGAACAAGA TACTAAACTG 181 GGACAGAAAT TTTGAGGATG GCCTCAAAAT TTCGTCATGG GACTTCCCCA CAAGTCTGGA 241 ATGCCTCTGA AATTCATTCG ACAAGCGTCG GACTCAAAGA AGCTCGTTAA GCCTGACATG 301 ACATGACTTG GCATTGACTT TTTCGAGATA CTATTTCTTA AAAAATTTCT TGCTTCTCTT 361 AAAAATTTCC CTTTTATATT TCATCTGTTT TGGCATAAGA TATTTTCTTA TCTATCAAGA 421 GTCGAGAAAT CGGGAAATCA ACCGAGGACG TCAAGACAAG GAGCAAACAA TCGAAGGGAT 481 CGACACAGAT CAGTATGTTT AAAACTGACA ATTTTTCTGT GGATGCAGGT TTATAGCTTC 541 ACTTCGAAAT CGGCCGAATT CAGGCCACTT GTAGTTCGAT AAGCTTGATT TACCGCACGA 601 TTTCAAAGAA TCAAAAGCCA CCTTGACACC GAATTATGAA GGTATCGAAA TGCTCGAGAA 661 TA Predicted gene structure (within gDNA segment 14266 to 21132): Exon 1 17082 17117 ( 36 n); cDNA 522 556 ( 35 n); score: 0.583 Intron 1 17118 20426 (3309 n); Pd: 0.470 (s: 0), Pa: 0.000 (s: 1.00) Exon 2 20427 20532 ( 106 n); cDNA 557 662 ( 106 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E390817- 1.000 142 0.215 C PGS_C08HBa0235H18.1+_SGN-E390817- (17082 17117,20427 20532) Alignment (genomic DNA sequence = upper lines): GATGAGGGTT TGGAGTTTCC TAATCCTAAG CTAACGGCAT TGAAAACAAA ATAAGATAAG 17141 |||| |||| | || || | || || | || GATGCAGGTT TATAGCTT-C ACTTCGAAAT CGGCCG.... .......... .......... 556 CAAATAGTAA AGAGAAGGAT AGAGAGAGAG AGATTTGGGT CCAACTCCGG GTTCTGTTAT 17201 .......... .......... .......... .......... .......... .......... 556 CCTTGACCGA ATGTTGGACC CACCTGCCTT TGGGTTTTTT AGCCCATTTC TGTACCTGTC 17261 .......... .......... .......... .......... .......... .......... 556 CTAATCTAAA CATACAAACA TAATATAGAA AACAAAAAAA CGACAAGAGG GCTTAGGCCC 17321 .......... .......... .......... .......... .......... .......... 556 ATTACAAAAT ATGCAAAGTA AAATAAAACG AAAGAAAAGT CTTTTAGTCC ATCGTCTTCA 17381 .......... .......... .......... .......... .......... .......... 556 ATCTCCATGA CCCTTGTCTT TCTACACTTG CTCGTTTTGA TGAATTGACT CGATAAAGTT 17441 .......... .......... .......... .......... .......... .......... 556 CAGAGTCTTC AAGACTCTCT CGAAATGCGA GGAGGATAAT GGGATTCCCA TAATGGACTC 17501 .......... .......... .......... .......... .......... .......... 556 ACGGGGAGTT TTCACATGTC ACAAAAAAAA CGATAAAATG AAGATTGGCA TTTTTAAAAC 17561 .......... .......... .......... .......... .......... .......... 556 TACAATTAGA ATAAGCAAGG TTCTAAAGCA TAACAAGGAT ATCTTTATAA TGCAATACTA 17621 .......... .......... .......... .......... .......... .......... 556 ATTAAATCTT CATGAGAAGC AAAGCCAACA TCCAACAACC TTAATGGTAC TTAGAGATAT 17681 .......... .......... .......... .......... .......... .......... 556 GCAAATCAGT CAACCTAAAT GACACTACAT AACGATACGT AAACTGTGCG GCGAAACCCC 17741 .......... .......... .......... .......... .......... .......... 556 AAGTGTAGTG AAACCTTCAC ACAAAATTGT TGGTAATTTC CAAATTTTAT ATTTAAAGAA 17801 .......... .......... .......... .......... .......... .......... 556 AGGACTTAGC ATGGGATAAA TAACGAATAC AAATAGAGAT GCATCATAAA TTGAGTATCA 17861 .......... .......... .......... .......... .......... .......... 556 ATTAGCCGTT TTGCGCTTCA AACATTTGAA ACAAACTTGA ACCAATCATA AGAGGACAGC 17921 .......... .......... .......... .......... .......... .......... 556 CTCATCAAAT AAAACAGGAT CCCGATCACC TTATCACCCA AACATCTAAC ACACTAAGCG 17981 .......... .......... .......... .......... .......... .......... 556 AAAGGACCAT TCAATCGACC TACTACATGG CTGTGACCTC GGACAGCTAA CACAAGTGGC 18041 .......... .......... .......... .......... .......... .......... 556 CACCAAGATA AAGATGGCCT TTCAAACCAC AGATTTCCAA AATCCACACC ACCCATACGG 18101 .......... .......... .......... .......... .......... .......... 556 CATACAAAAC GAAACTTTCA TGCAAGACGC CTGACAAACA TGATATCTAA ACAAGATAAC 18161 .......... .......... .......... .......... .......... .......... 556 AAGTTTGGGA GATAAATACA TTATAGAGAA TAAACAACCC TCATATATTC TTAAAGCGAT 18221 .......... .......... .......... .......... .......... .......... 556 ACTCGAACCA AAAGCTTGAA GAAGGTTCGA TTGAAAAGAA GCTTACAACT ACAACTCCCG 18281 .......... .......... .......... .......... .......... .......... 556 CGAGATAGAC ATCATGAGCA AGCTTGGACG AGACAACAAG GGAAAATTAC ACTCTAAACA 18341 .......... .......... .......... .......... .......... .......... 556 TACATACATG CATACAAACA ATCCAAGAGC CTGCTTTAAC GAATAGACAT CGATACTCGG 18401 .......... .......... .......... .......... .......... .......... 556 ATTAATGAGT CATTTCACAG AAGCTCTTGC CAATATGTCT TAACAATCTC ATTCCAATCA 18461 .......... .......... .......... .......... .......... .......... 556 TGTGACGAAT AAATAGTGTT CTACGAGATT AAGCTAGCAT ATATTGAAAG TTCTAAATGG 18521 .......... .......... .......... .......... .......... .......... 556 CAAGCAAAGC AGCGACAGTG TTAACAAACC ACAAAGACAA GCTCAACCGA CCATGTATAT 18581 .......... .......... .......... .......... .......... .......... 556 TCACATTTTC GAGTATCTCA ACATGTTCGA CCACAAACTA AGAAAGGGCC AGCAAGTCGA 18641 .......... .......... .......... .......... .......... .......... 556 TTAACAAACA TCACATGTCA TACGGCGAAG GCTCCTCGAA ACAAATACAA AGTCATGACT 18701 .......... .......... .......... .......... .......... .......... 556 AACTCGTGAA GACAAACAGA GAAGCAATGT CGACGAACCA TCACATTGGG ACAGAATCAC 18761 .......... .......... .......... .......... .......... .......... 556 AACGTAAGAC ATATTCCAGA CTTAAACAAC CAAACGAAAT ATGATACCTC ATGTTGACAG 18821 .......... .......... .......... .......... .......... .......... 556 CACCACAAAC CACGACTCAA CTCCATAAAG AAAATTTAAA ATAATAAAGA AAAATGGGAC 18881 .......... .......... .......... .......... .......... .......... 556 ATGTACCTTT CTCGGAGCAG CGGAACAGGG ATGACGGCGA GCAGACGACG ATGACTTCCC 18941 .......... .......... .......... .......... .......... .......... 556 CACGCGACCC ACGGCTAGAC GTTTATCTCG TTTGTTCTTC GTATTGGAGT CCTATTCCCG 19001 .......... .......... .......... .......... .......... .......... 556 AAAAATCCCG ACTGTTTTGC TACACGAACA GGACAGGAAG AAATCTTCTT CAAAGTCTTC 19061 .......... .......... .......... .......... .......... .......... 556 CTAAACCAGA ATTTCTAACC AAATTTTCTA ACTTCTTTTG GTTATCTCAG AAACAATGGA 19121 .......... .......... .......... .......... .......... .......... 556 ATAAACCCAG AATTTCAAAC AACGTTCCCA ACCCAAAATT TCCTAACAAG AGACGGAAGA 19181 .......... .......... .......... .......... .......... .......... 556 AGCAGAGTCT TTTTTTTTCG AAAATTTTCT CAACCAAAAT CCCTAACCCT TTTCTGTGTC 19241 .......... .......... .......... .......... .......... .......... 556 TTTCTTTTCT TTTTCAAAAA TCTCAAATAT CTAACATTCT TTCAACTCCC AAAATTCCCA 19301 .......... .......... .......... .......... .......... .......... 556 GCGCTCCAAG TTCTGCTTTT CCGAATTTTT CGATGAAAAA ATCTCTCACC CCTTTTCTGA 19361 .......... .......... .......... .......... .......... .......... 556 TGAAGAAAAG GGGTATTTAT AGAGGAGAAG AAATAGCCCC CCTTTTCTCC TTTTGAAATC 19421 .......... .......... .......... .......... .......... .......... 556 GAAACTAAAT CCCGTTTCGG TCAAACTTCA CATGGCACAG GCGTGTTGGA GAGGATGAAA 19481 .......... .......... .......... .......... .......... .......... 556 TTGACACCTC GCAGACCTAC TCGACAGCGT ATGGGTCTCT GCGCTTCCGT TTGGTTCACG 19541 .......... .......... .......... .......... .......... .......... 556 CGAAGAGAAA GATGGAAGGA GAAGAGCGTG GGGTTGTTGG AGTCTCTCTG TTTTTCGCGT 19601 .......... .......... .......... .......... .......... .......... 556 GATTTCTGGG GAATTATGGG TTTTTGTCGA GAGGGGAAGG AGAGAGCGAG CGTGGGGGAG 19661 .......... .......... .......... .......... .......... .......... 556 ACGCGGGGAG AGGATAAGAG GAAGGGAGAG AGCGAGGAGA GAGCGTGGGG AGGGGGTCGC 19721 .......... .......... .......... .......... .......... .......... 556 GTGGCTGCGC ATCTGGGAAT TGTTTGGGAA TTTTGGCTTT CTGTTTTGCT GGGTTCGCGT 19781 .......... .......... .......... .......... .......... .......... 556 GGGGTGAGGG GAGAAGAAGG AAAGGGGAAC GGGTCGGGTC GGGTAGGATG GGTTCTGGGT 19841 .......... .......... .......... .......... .......... .......... 556 CGGGTAGGAT GGGTTATGGT GAATTGGGTT GGGCTGGAGA ATAAAAGAAT TGGGTGTTGG 19901 .......... .......... .......... .......... .......... .......... 556 GATTAATTTG TTGGGCTTGT TTTAAAAATG TGTGTTGGGT TGGTATTTTT TAAAAGAAAT 19961 .......... .......... .......... .......... .......... .......... 556 AAAAGGGGAT GTTGGACTGG GTTGAAGAGG ATGGGCGTCT GGGGGGAATT GGGCCTTGAG 20021 .......... .......... .......... .......... .......... .......... 556 TCTGTGGGCT GTTGGGAATA TTGGGTGTAA GGAATTTAGG CAAAATGGGT TGAGGACGAA 20081 .......... .......... .......... .......... .......... .......... 556 AGTGGGCCTC GGAATAAGAG TGGGCTGATG GGTAAAGGAA TGGGTTCAAG ATATACATAT 20141 .......... .......... .......... .......... .......... .......... 556 ATACATATAC ATATATGTAT ATACATATAT GTATATATGT ACATATATTT ATTTTCGCAA 20201 .......... .......... .......... .......... .......... .......... 556 GGTTTATAAA ACTAACTAAC TCATACCGAC GCGGGTCAAA ATTGGGTGTC AACAACTGTC 20261 .......... .......... .......... .......... .......... .......... 556 CCTCATTTTA CTTGGGTGGA TGCAAGCAAC TCGAGGAAAA TGAAGTTGAC CGAACCAATT 20321 .......... .......... .......... .......... .......... .......... 556 TTGACCAACT CCACTCGCCT TCAGGAAGAA GGATTTGTCA AAGAGTTTAG GAATTATGGC 20381 .......... .......... .......... .......... .......... .......... 556 CGAACCCTTG CAAACGGGTC TCCTACATAC CTCAGGCTAT ATGAGAATTC AGGCCACTTG 20441 ||||| |||||||||| .......... .......... .......... .......... .....AATTC AGGCCACTTG 571 TAGTTCGATA AGCTTGATTT ACCGCACGAT TTCAAAGAAT CAAAAGCCAC CTTGACACCG 20501 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGTTCGATA AGCTTGATTT ACCGCACGAT TTCAAAGAAT CAAAAGCCAC CTTGACACCG 631 AATTATGAAG GTATCGAAAT GCTCGAGAAT A 20532 |||||||||| |||||||||| |||||||||| | AATTATGAAG GTATCGAAAT GCTCGAGAAT A 662 hqPGS_C08HBa0235H18.1+_SGN-E390817- (20427 20532) ******************************************************************************** EST sequence 1125 -strand 674 n (File: SGN-E397010-) 1 CCCCCCTTTC TCCAATAGAA AATGGACAGA AATTTTGAGA GGGACTCAAA AATTCTCCAG 61 AAGGAACCTT CTCTTCAGCG GATCAAACTA AAGACATTTC GAATTTGCGA CTGGGACAGA 121 ATTTTTTAGA AGATCTCAAA AATTCCGAGA TCTGTTCGGT TACAATGGAA AGATGAACAA 181 GATACTAAAC TGGGACAGAA ATTTTGAGGA TGGCCTCAAA ATTTCGTCAT GGGACTTCCC 241 CACAAGTCTG GAATGCCTCT GAAATTCATT CGACAAGCGT CGGACTCAAA GAAGCTCGTT 301 AAGCCTGACA TGACATGACT TGGCATTGAC TTTTTCGAGA TACTATTTCT TAAAAAATTT 361 CTTGCTTCTC TTAAAAATTT CCCTTTTATA TTTCATCTGT TTTGGCATAA GATATTTTCT 421 TATCTATCAA GAGTCGAGAA ATCGGGAAAT CAACCGAGGA CGTCAAGACA AGGAGCAAAC 481 AATCGAAGGG ATCGACACAG ATCAGTATGT TTAAAACTGA CAATTTTTCT GTGGATGCAG 541 GTTTATAGCT TCACTTCGAA ATCGGCCGAA TTCAGGCCAC TTGTAGTTCG ATAAGCTTGA 601 TTTACCGCAC GATTTCAAAG AATCAAAAGC CACCTTGACA CCGAATTATG AAGGTATCGA 661 AATGCTCGAG AATA Predicted gene structure (within gDNA segment 14146 to 21132): Exon 1 17082 17117 ( 36 n); cDNA 534 568 ( 35 n); score: 0.583 Intron 1 17118 20426 (3309 n); Pd: 0.470 (s: 0), Pa: 0.000 (s: 1.00) Exon 2 20427 20532 ( 106 n); cDNA 569 674 ( 106 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E397010- 1.000 142 0.211 C PGS_C08HBa0235H18.1+_SGN-E397010- (17082 17117,20427 20532) Alignment (genomic DNA sequence = upper lines): GATGAGGGTT TGGAGTTTCC TAATCCTAAG CTAACGGCAT TGAAAACAAA ATAAGATAAG 17141 |||| |||| | || || | || || | || GATGCAGGTT TATAGCTT-C ACTTCGAAAT CGGCCG.... .......... .......... 568 CAAATAGTAA AGAGAAGGAT AGAGAGAGAG AGATTTGGGT CCAACTCCGG GTTCTGTTAT 17201 .......... .......... .......... .......... .......... .......... 568 CCTTGACCGA ATGTTGGACC CACCTGCCTT TGGGTTTTTT AGCCCATTTC TGTACCTGTC 17261 .......... .......... .......... .......... .......... .......... 568 CTAATCTAAA CATACAAACA TAATATAGAA AACAAAAAAA CGACAAGAGG GCTTAGGCCC 17321 .......... .......... .......... .......... .......... .......... 568 ATTACAAAAT ATGCAAAGTA AAATAAAACG AAAGAAAAGT CTTTTAGTCC ATCGTCTTCA 17381 .......... .......... .......... .......... .......... .......... 568 ATCTCCATGA CCCTTGTCTT TCTACACTTG CTCGTTTTGA TGAATTGACT CGATAAAGTT 17441 .......... .......... .......... .......... .......... .......... 568 CAGAGTCTTC AAGACTCTCT CGAAATGCGA GGAGGATAAT GGGATTCCCA TAATGGACTC 17501 .......... .......... .......... .......... .......... .......... 568 ACGGGGAGTT TTCACATGTC ACAAAAAAAA CGATAAAATG AAGATTGGCA TTTTTAAAAC 17561 .......... .......... .......... .......... .......... .......... 568 TACAATTAGA ATAAGCAAGG TTCTAAAGCA TAACAAGGAT ATCTTTATAA TGCAATACTA 17621 .......... .......... .......... .......... .......... .......... 568 ATTAAATCTT CATGAGAAGC AAAGCCAACA TCCAACAACC TTAATGGTAC TTAGAGATAT 17681 .......... .......... .......... .......... .......... .......... 568 GCAAATCAGT CAACCTAAAT GACACTACAT AACGATACGT AAACTGTGCG GCGAAACCCC 17741 .......... .......... .......... .......... .......... .......... 568 AAGTGTAGTG AAACCTTCAC ACAAAATTGT TGGTAATTTC CAAATTTTAT ATTTAAAGAA 17801 .......... .......... .......... .......... .......... .......... 568 AGGACTTAGC ATGGGATAAA TAACGAATAC AAATAGAGAT GCATCATAAA TTGAGTATCA 17861 .......... .......... .......... .......... .......... .......... 568 ATTAGCCGTT TTGCGCTTCA AACATTTGAA ACAAACTTGA ACCAATCATA AGAGGACAGC 17921 .......... .......... .......... .......... .......... .......... 568 CTCATCAAAT AAAACAGGAT CCCGATCACC TTATCACCCA AACATCTAAC ACACTAAGCG 17981 .......... .......... .......... .......... .......... .......... 568 AAAGGACCAT TCAATCGACC TACTACATGG CTGTGACCTC GGACAGCTAA CACAAGTGGC 18041 .......... .......... .......... .......... .......... .......... 568 CACCAAGATA AAGATGGCCT TTCAAACCAC AGATTTCCAA AATCCACACC ACCCATACGG 18101 .......... .......... .......... .......... .......... .......... 568 CATACAAAAC GAAACTTTCA TGCAAGACGC CTGACAAACA TGATATCTAA ACAAGATAAC 18161 .......... .......... .......... .......... .......... .......... 568 AAGTTTGGGA GATAAATACA TTATAGAGAA TAAACAACCC TCATATATTC TTAAAGCGAT 18221 .......... .......... .......... .......... .......... .......... 568 ACTCGAACCA AAAGCTTGAA GAAGGTTCGA TTGAAAAGAA GCTTACAACT ACAACTCCCG 18281 .......... .......... .......... .......... .......... .......... 568 CGAGATAGAC ATCATGAGCA AGCTTGGACG AGACAACAAG GGAAAATTAC ACTCTAAACA 18341 .......... .......... .......... .......... .......... .......... 568 TACATACATG CATACAAACA ATCCAAGAGC CTGCTTTAAC GAATAGACAT CGATACTCGG 18401 .......... .......... .......... .......... .......... .......... 568 ATTAATGAGT CATTTCACAG AAGCTCTTGC CAATATGTCT TAACAATCTC ATTCCAATCA 18461 .......... .......... .......... .......... .......... .......... 568 TGTGACGAAT AAATAGTGTT CTACGAGATT AAGCTAGCAT ATATTGAAAG TTCTAAATGG 18521 .......... .......... .......... .......... .......... .......... 568 CAAGCAAAGC AGCGACAGTG TTAACAAACC ACAAAGACAA GCTCAACCGA CCATGTATAT 18581 .......... .......... .......... .......... .......... .......... 568 TCACATTTTC GAGTATCTCA ACATGTTCGA CCACAAACTA AGAAAGGGCC AGCAAGTCGA 18641 .......... .......... .......... .......... .......... .......... 568 TTAACAAACA TCACATGTCA TACGGCGAAG GCTCCTCGAA ACAAATACAA AGTCATGACT 18701 .......... .......... .......... .......... .......... .......... 568 AACTCGTGAA GACAAACAGA GAAGCAATGT CGACGAACCA TCACATTGGG ACAGAATCAC 18761 .......... .......... .......... .......... .......... .......... 568 AACGTAAGAC ATATTCCAGA CTTAAACAAC CAAACGAAAT ATGATACCTC ATGTTGACAG 18821 .......... .......... .......... .......... .......... .......... 568 CACCACAAAC CACGACTCAA CTCCATAAAG AAAATTTAAA ATAATAAAGA AAAATGGGAC 18881 .......... .......... .......... .......... .......... .......... 568 ATGTACCTTT CTCGGAGCAG CGGAACAGGG ATGACGGCGA GCAGACGACG ATGACTTCCC 18941 .......... .......... .......... .......... .......... .......... 568 CACGCGACCC ACGGCTAGAC GTTTATCTCG TTTGTTCTTC GTATTGGAGT CCTATTCCCG 19001 .......... .......... .......... .......... .......... .......... 568 AAAAATCCCG ACTGTTTTGC TACACGAACA GGACAGGAAG AAATCTTCTT CAAAGTCTTC 19061 .......... .......... .......... .......... .......... .......... 568 CTAAACCAGA ATTTCTAACC AAATTTTCTA ACTTCTTTTG GTTATCTCAG AAACAATGGA 19121 .......... .......... .......... .......... .......... .......... 568 ATAAACCCAG AATTTCAAAC AACGTTCCCA ACCCAAAATT TCCTAACAAG AGACGGAAGA 19181 .......... .......... .......... .......... .......... .......... 568 AGCAGAGTCT TTTTTTTTCG AAAATTTTCT CAACCAAAAT CCCTAACCCT TTTCTGTGTC 19241 .......... .......... .......... .......... .......... .......... 568 TTTCTTTTCT TTTTCAAAAA TCTCAAATAT CTAACATTCT TTCAACTCCC AAAATTCCCA 19301 .......... .......... .......... .......... .......... .......... 568 GCGCTCCAAG TTCTGCTTTT CCGAATTTTT CGATGAAAAA ATCTCTCACC CCTTTTCTGA 19361 .......... .......... .......... .......... .......... .......... 568 TGAAGAAAAG GGGTATTTAT AGAGGAGAAG AAATAGCCCC CCTTTTCTCC TTTTGAAATC 19421 .......... .......... .......... .......... .......... .......... 568 GAAACTAAAT CCCGTTTCGG TCAAACTTCA CATGGCACAG GCGTGTTGGA GAGGATGAAA 19481 .......... .......... .......... .......... .......... .......... 568 TTGACACCTC GCAGACCTAC TCGACAGCGT ATGGGTCTCT GCGCTTCCGT TTGGTTCACG 19541 .......... .......... .......... .......... .......... .......... 568 CGAAGAGAAA GATGGAAGGA GAAGAGCGTG GGGTTGTTGG AGTCTCTCTG TTTTTCGCGT 19601 .......... .......... .......... .......... .......... .......... 568 GATTTCTGGG GAATTATGGG TTTTTGTCGA GAGGGGAAGG AGAGAGCGAG CGTGGGGGAG 19661 .......... .......... .......... .......... .......... .......... 568 ACGCGGGGAG AGGATAAGAG GAAGGGAGAG AGCGAGGAGA GAGCGTGGGG AGGGGGTCGC 19721 .......... .......... .......... .......... .......... .......... 568 GTGGCTGCGC ATCTGGGAAT TGTTTGGGAA TTTTGGCTTT CTGTTTTGCT GGGTTCGCGT 19781 .......... .......... .......... .......... .......... .......... 568 GGGGTGAGGG GAGAAGAAGG AAAGGGGAAC GGGTCGGGTC GGGTAGGATG GGTTCTGGGT 19841 .......... .......... .......... .......... .......... .......... 568 CGGGTAGGAT GGGTTATGGT GAATTGGGTT GGGCTGGAGA ATAAAAGAAT TGGGTGTTGG 19901 .......... .......... .......... .......... .......... .......... 568 GATTAATTTG TTGGGCTTGT TTTAAAAATG TGTGTTGGGT TGGTATTTTT TAAAAGAAAT 19961 .......... .......... .......... .......... .......... .......... 568 AAAAGGGGAT GTTGGACTGG GTTGAAGAGG ATGGGCGTCT GGGGGGAATT GGGCCTTGAG 20021 .......... .......... .......... .......... .......... .......... 568 TCTGTGGGCT GTTGGGAATA TTGGGTGTAA GGAATTTAGG CAAAATGGGT TGAGGACGAA 20081 .......... .......... .......... .......... .......... .......... 568 AGTGGGCCTC GGAATAAGAG TGGGCTGATG GGTAAAGGAA TGGGTTCAAG ATATACATAT 20141 .......... .......... .......... .......... .......... .......... 568 ATACATATAC ATATATGTAT ATACATATAT GTATATATGT ACATATATTT ATTTTCGCAA 20201 .......... .......... .......... .......... .......... .......... 568 GGTTTATAAA ACTAACTAAC TCATACCGAC GCGGGTCAAA ATTGGGTGTC AACAACTGTC 20261 .......... .......... .......... .......... .......... .......... 568 CCTCATTTTA CTTGGGTGGA TGCAAGCAAC TCGAGGAAAA TGAAGTTGAC CGAACCAATT 20321 .......... .......... .......... .......... .......... .......... 568 TTGACCAACT CCACTCGCCT TCAGGAAGAA GGATTTGTCA AAGAGTTTAG GAATTATGGC 20381 .......... .......... .......... .......... .......... .......... 568 CGAACCCTTG CAAACGGGTC TCCTACATAC CTCAGGCTAT ATGAGAATTC AGGCCACTTG 20441 ||||| |||||||||| .......... .......... .......... .......... .....AATTC AGGCCACTTG 583 TAGTTCGATA AGCTTGATTT ACCGCACGAT TTCAAAGAAT CAAAAGCCAC CTTGACACCG 20501 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGTTCGATA AGCTTGATTT ACCGCACGAT TTCAAAGAAT CAAAAGCCAC CTTGACACCG 643 AATTATGAAG GTATCGAAAT GCTCGAGAAT A 20532 |||||||||| |||||||||| |||||||||| | AATTATGAAG GTATCGAAAT GCTCGAGAAT A 674 hqPGS_C08HBa0235H18.1+_SGN-E397010- (20427 20532) ******************************************************************************** EST sequence 1126 -strand 506 n (File: SGN-E397205-) 1 AAAGATGAAC AAGATACTAA ACTGGGACAG AAATTTTGAG GATGGCCTCA AAATTTCGTC 61 ATGGGACTTC CCCACAAGTC TGGAATGCCT CTGAAATTCA TTCGACAAGC GTCGGACTCA 121 AAGAAGCTCG TTAAGCCTGA CATGACATGA CTTGGCATTG ACTTTTTCGA GATACTATTT 181 CTTAAAAAAT TTCTTGCTTC TCTTAAAAAT TTCCCTTTTA TATTTCATCT GTTTTGGCAT 241 AAGATATTTT CTTATCTATC AAGAGTCGAG AAATCGGGAA ATCAACCGAG GACGTCAAGA 301 CAAGGAGCAA ACAATCGAAG GGATCGACAC AGATCAGTAT GTTTAAAACT GACAATTTTT 361 CTGTGGATGC AGGTTTATAG CTTCACTTCG AAATCGGCCG AATTCAGGCC ACTTGTAGTT 421 CGATAAGCTT GATTTACCGC ACGATTTCAA AGAATCAAAA GCCACCTTGA CACCGAATTA 481 TGAAGGTATC GAAATGCTCG AGAATA Predicted gene structure (within gDNA segment 15826 to 21132): Exon 1 17082 17117 ( 36 n); cDNA 366 400 ( 35 n); score: 0.583 Intron 1 17118 20426 (3309 n); Pd: 0.470 (s: 0), Pa: 0.000 (s: 1.00) Exon 2 20427 20532 ( 106 n); cDNA 401 506 ( 106 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E397205- 1.000 142 0.281 C PGS_C08HBa0235H18.1+_SGN-E397205- (17082 17117,20427 20532) Alignment (genomic DNA sequence = upper lines): GATGAGGGTT TGGAGTTTCC TAATCCTAAG CTAACGGCAT TGAAAACAAA ATAAGATAAG 17141 |||| |||| | || || | || || | || GATGCAGGTT TATAGCTT-C ACTTCGAAAT CGGCCG.... .......... .......... 400 CAAATAGTAA AGAGAAGGAT AGAGAGAGAG AGATTTGGGT CCAACTCCGG GTTCTGTTAT 17201 .......... .......... .......... .......... .......... .......... 400 CCTTGACCGA ATGTTGGACC CACCTGCCTT TGGGTTTTTT AGCCCATTTC TGTACCTGTC 17261 .......... .......... .......... .......... .......... .......... 400 CTAATCTAAA CATACAAACA TAATATAGAA AACAAAAAAA CGACAAGAGG GCTTAGGCCC 17321 .......... .......... .......... .......... .......... .......... 400 ATTACAAAAT ATGCAAAGTA AAATAAAACG AAAGAAAAGT CTTTTAGTCC ATCGTCTTCA 17381 .......... .......... .......... .......... .......... .......... 400 ATCTCCATGA CCCTTGTCTT TCTACACTTG CTCGTTTTGA TGAATTGACT CGATAAAGTT 17441 .......... .......... .......... .......... .......... .......... 400 CAGAGTCTTC AAGACTCTCT CGAAATGCGA GGAGGATAAT GGGATTCCCA TAATGGACTC 17501 .......... .......... .......... .......... .......... .......... 400 ACGGGGAGTT TTCACATGTC ACAAAAAAAA CGATAAAATG AAGATTGGCA TTTTTAAAAC 17561 .......... .......... .......... .......... .......... .......... 400 TACAATTAGA ATAAGCAAGG TTCTAAAGCA TAACAAGGAT ATCTTTATAA TGCAATACTA 17621 .......... .......... .......... .......... .......... .......... 400 ATTAAATCTT CATGAGAAGC AAAGCCAACA TCCAACAACC TTAATGGTAC TTAGAGATAT 17681 .......... .......... .......... .......... .......... .......... 400 GCAAATCAGT CAACCTAAAT GACACTACAT AACGATACGT AAACTGTGCG GCGAAACCCC 17741 .......... .......... .......... .......... .......... .......... 400 AAGTGTAGTG AAACCTTCAC ACAAAATTGT TGGTAATTTC CAAATTTTAT ATTTAAAGAA 17801 .......... .......... .......... .......... .......... .......... 400 AGGACTTAGC ATGGGATAAA TAACGAATAC AAATAGAGAT GCATCATAAA TTGAGTATCA 17861 .......... .......... .......... .......... .......... .......... 400 ATTAGCCGTT TTGCGCTTCA AACATTTGAA ACAAACTTGA ACCAATCATA AGAGGACAGC 17921 .......... .......... .......... .......... .......... .......... 400 CTCATCAAAT AAAACAGGAT CCCGATCACC TTATCACCCA AACATCTAAC ACACTAAGCG 17981 .......... .......... .......... .......... .......... .......... 400 AAAGGACCAT TCAATCGACC TACTACATGG CTGTGACCTC GGACAGCTAA CACAAGTGGC 18041 .......... .......... .......... .......... .......... .......... 400 CACCAAGATA AAGATGGCCT TTCAAACCAC AGATTTCCAA AATCCACACC ACCCATACGG 18101 .......... .......... .......... .......... .......... .......... 400 CATACAAAAC GAAACTTTCA TGCAAGACGC CTGACAAACA TGATATCTAA ACAAGATAAC 18161 .......... .......... .......... .......... .......... .......... 400 AAGTTTGGGA GATAAATACA TTATAGAGAA TAAACAACCC TCATATATTC TTAAAGCGAT 18221 .......... .......... .......... .......... .......... .......... 400 ACTCGAACCA AAAGCTTGAA GAAGGTTCGA TTGAAAAGAA GCTTACAACT ACAACTCCCG 18281 .......... .......... .......... .......... .......... .......... 400 CGAGATAGAC ATCATGAGCA AGCTTGGACG AGACAACAAG GGAAAATTAC ACTCTAAACA 18341 .......... .......... .......... .......... .......... .......... 400 TACATACATG CATACAAACA ATCCAAGAGC CTGCTTTAAC GAATAGACAT CGATACTCGG 18401 .......... .......... .......... .......... .......... .......... 400 ATTAATGAGT CATTTCACAG AAGCTCTTGC CAATATGTCT TAACAATCTC ATTCCAATCA 18461 .......... .......... .......... .......... .......... .......... 400 TGTGACGAAT AAATAGTGTT CTACGAGATT AAGCTAGCAT ATATTGAAAG TTCTAAATGG 18521 .......... .......... .......... .......... .......... .......... 400 CAAGCAAAGC AGCGACAGTG TTAACAAACC ACAAAGACAA GCTCAACCGA CCATGTATAT 18581 .......... .......... .......... .......... .......... .......... 400 TCACATTTTC GAGTATCTCA ACATGTTCGA CCACAAACTA AGAAAGGGCC AGCAAGTCGA 18641 .......... .......... .......... .......... .......... .......... 400 TTAACAAACA TCACATGTCA TACGGCGAAG GCTCCTCGAA ACAAATACAA AGTCATGACT 18701 .......... .......... .......... .......... .......... .......... 400 AACTCGTGAA GACAAACAGA GAAGCAATGT CGACGAACCA TCACATTGGG ACAGAATCAC 18761 .......... .......... .......... .......... .......... .......... 400 AACGTAAGAC ATATTCCAGA CTTAAACAAC CAAACGAAAT ATGATACCTC ATGTTGACAG 18821 .......... .......... .......... .......... .......... .......... 400 CACCACAAAC CACGACTCAA CTCCATAAAG AAAATTTAAA ATAATAAAGA AAAATGGGAC 18881 .......... .......... .......... .......... .......... .......... 400 ATGTACCTTT CTCGGAGCAG CGGAACAGGG ATGACGGCGA GCAGACGACG ATGACTTCCC 18941 .......... .......... .......... .......... .......... .......... 400 CACGCGACCC ACGGCTAGAC GTTTATCTCG TTTGTTCTTC GTATTGGAGT CCTATTCCCG 19001 .......... .......... .......... .......... .......... .......... 400 AAAAATCCCG ACTGTTTTGC TACACGAACA GGACAGGAAG AAATCTTCTT CAAAGTCTTC 19061 .......... .......... .......... .......... .......... .......... 400 CTAAACCAGA ATTTCTAACC AAATTTTCTA ACTTCTTTTG GTTATCTCAG AAACAATGGA 19121 .......... .......... .......... .......... .......... .......... 400 ATAAACCCAG AATTTCAAAC AACGTTCCCA ACCCAAAATT TCCTAACAAG AGACGGAAGA 19181 .......... .......... .......... .......... .......... .......... 400 AGCAGAGTCT TTTTTTTTCG AAAATTTTCT CAACCAAAAT CCCTAACCCT TTTCTGTGTC 19241 .......... .......... .......... .......... .......... .......... 400 TTTCTTTTCT TTTTCAAAAA TCTCAAATAT CTAACATTCT TTCAACTCCC AAAATTCCCA 19301 .......... .......... .......... .......... .......... .......... 400 GCGCTCCAAG TTCTGCTTTT CCGAATTTTT CGATGAAAAA ATCTCTCACC CCTTTTCTGA 19361 .......... .......... .......... .......... .......... .......... 400 TGAAGAAAAG GGGTATTTAT AGAGGAGAAG AAATAGCCCC CCTTTTCTCC TTTTGAAATC 19421 .......... .......... .......... .......... .......... .......... 400 GAAACTAAAT CCCGTTTCGG TCAAACTTCA CATGGCACAG GCGTGTTGGA GAGGATGAAA 19481 .......... .......... .......... .......... .......... .......... 400 TTGACACCTC GCAGACCTAC TCGACAGCGT ATGGGTCTCT GCGCTTCCGT TTGGTTCACG 19541 .......... .......... .......... .......... .......... .......... 400 CGAAGAGAAA GATGGAAGGA GAAGAGCGTG GGGTTGTTGG AGTCTCTCTG TTTTTCGCGT 19601 .......... .......... .......... .......... .......... .......... 400 GATTTCTGGG GAATTATGGG TTTTTGTCGA GAGGGGAAGG AGAGAGCGAG CGTGGGGGAG 19661 .......... .......... .......... .......... .......... .......... 400 ACGCGGGGAG AGGATAAGAG GAAGGGAGAG AGCGAGGAGA GAGCGTGGGG AGGGGGTCGC 19721 .......... .......... .......... .......... .......... .......... 400 GTGGCTGCGC ATCTGGGAAT TGTTTGGGAA TTTTGGCTTT CTGTTTTGCT GGGTTCGCGT 19781 .......... .......... .......... .......... .......... .......... 400 GGGGTGAGGG GAGAAGAAGG AAAGGGGAAC GGGTCGGGTC GGGTAGGATG GGTTCTGGGT 19841 .......... .......... .......... .......... .......... .......... 400 CGGGTAGGAT GGGTTATGGT GAATTGGGTT GGGCTGGAGA ATAAAAGAAT TGGGTGTTGG 19901 .......... .......... .......... .......... .......... .......... 400 GATTAATTTG TTGGGCTTGT TTTAAAAATG TGTGTTGGGT TGGTATTTTT TAAAAGAAAT 19961 .......... .......... .......... .......... .......... .......... 400 AAAAGGGGAT GTTGGACTGG GTTGAAGAGG ATGGGCGTCT GGGGGGAATT GGGCCTTGAG 20021 .......... .......... .......... .......... .......... .......... 400 TCTGTGGGCT GTTGGGAATA TTGGGTGTAA GGAATTTAGG CAAAATGGGT TGAGGACGAA 20081 .......... .......... .......... .......... .......... .......... 400 AGTGGGCCTC GGAATAAGAG TGGGCTGATG GGTAAAGGAA TGGGTTCAAG ATATACATAT 20141 .......... .......... .......... .......... .......... .......... 400 ATACATATAC ATATATGTAT ATACATATAT GTATATATGT ACATATATTT ATTTTCGCAA 20201 .......... .......... .......... .......... .......... .......... 400 GGTTTATAAA ACTAACTAAC TCATACCGAC GCGGGTCAAA ATTGGGTGTC AACAACTGTC 20261 .......... .......... .......... .......... .......... .......... 400 CCTCATTTTA CTTGGGTGGA TGCAAGCAAC TCGAGGAAAA TGAAGTTGAC CGAACCAATT 20321 .......... .......... .......... .......... .......... .......... 400 TTGACCAACT CCACTCGCCT TCAGGAAGAA GGATTTGTCA AAGAGTTTAG GAATTATGGC 20381 .......... .......... .......... .......... .......... .......... 400 CGAACCCTTG CAAACGGGTC TCCTACATAC CTCAGGCTAT ATGAGAATTC AGGCCACTTG 20441 ||||| |||||||||| .......... .......... .......... .......... .....AATTC AGGCCACTTG 415 TAGTTCGATA AGCTTGATTT ACCGCACGAT TTCAAAGAAT CAAAAGCCAC CTTGACACCG 20501 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGTTCGATA AGCTTGATTT ACCGCACGAT TTCAAAGAAT CAAAAGCCAC CTTGACACCG 475 AATTATGAAG GTATCGAAAT GCTCGAGAAT A 20532 |||||||||| |||||||||| |||||||||| | AATTATGAAG GTATCGAAAT GCTCGAGAAT A 506 hqPGS_C08HBa0235H18.1+_SGN-E397205- (20427 20532) ******************************************************************************** EST sequence 1174 -strand 439 n (File: SGN-E397267-) 1 CCCCCCCAAT TCTGGAATCC TTTTGAAATT CATTCGACCA GGCGTCGGAT TCAAAGAAGC 61 TCGTTAAGCC TGACATGACA CGACTGGGCA TTGACTTTTT CGAGATACTA TTTCTTAAAA 121 AATTTCTTGC TTCTCTTAAA AATTTCCCTT TTATATTTCA TCTGTTTTGG CATAAGATAT 181 TTTCTTATCT ATCAAGAGTC GAGAAATCGG GAAATCAACC GAGGACGTCA AGACAAGGAG 241 CAAACAATCG AAGGGATCGA CACAGATCAG TATGTTTAAA ACTGACAATT TTTCTGTGGA 301 TGCAGGTTTA TAGCTTCACT TCGAAATCGG CCGAATTCAG GCCACTTGTA GTTCGATAAG 361 CTTGATTTAC CGCACGATTT CAAAGAATCA AAAGCCACCT TGACACCGAA TTATGAAGGT 421 ATCGAAATGC TCGAGAATA Predicted gene structure (within gDNA segment 15896 to 21132): Exon 1 17082 17117 ( 36 n); cDNA 299 333 ( 35 n); score: 0.583 Intron 1 17118 20426 (3309 n); Pd: 0.470 (s: 0), Pa: 0.000 (s: 1.00) Exon 2 20427 20532 ( 106 n); cDNA 334 439 ( 106 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E397267- 1.000 142 0.323 C PGS_C08HBa0235H18.1+_SGN-E397267- (17082 17117,20427 20532) Alignment (genomic DNA sequence = upper lines): GATGAGGGTT TGGAGTTTCC TAATCCTAAG CTAACGGCAT TGAAAACAAA ATAAGATAAG 17141 |||| |||| | || || | || || | || GATGCAGGTT TATAGCTT-C ACTTCGAAAT CGGCCG.... .......... .......... 333 CAAATAGTAA AGAGAAGGAT AGAGAGAGAG AGATTTGGGT CCAACTCCGG GTTCTGTTAT 17201 .......... .......... .......... .......... .......... .......... 333 CCTTGACCGA ATGTTGGACC CACCTGCCTT TGGGTTTTTT AGCCCATTTC TGTACCTGTC 17261 .......... .......... .......... .......... .......... .......... 333 CTAATCTAAA CATACAAACA TAATATAGAA AACAAAAAAA CGACAAGAGG GCTTAGGCCC 17321 .......... .......... .......... .......... .......... .......... 333 ATTACAAAAT ATGCAAAGTA AAATAAAACG AAAGAAAAGT CTTTTAGTCC ATCGTCTTCA 17381 .......... .......... .......... .......... .......... .......... 333 ATCTCCATGA CCCTTGTCTT TCTACACTTG CTCGTTTTGA TGAATTGACT CGATAAAGTT 17441 .......... .......... .......... .......... .......... .......... 333 CAGAGTCTTC AAGACTCTCT CGAAATGCGA GGAGGATAAT GGGATTCCCA TAATGGACTC 17501 .......... .......... .......... .......... .......... .......... 333 ACGGGGAGTT TTCACATGTC ACAAAAAAAA CGATAAAATG AAGATTGGCA TTTTTAAAAC 17561 .......... .......... .......... .......... .......... .......... 333 TACAATTAGA ATAAGCAAGG TTCTAAAGCA TAACAAGGAT ATCTTTATAA TGCAATACTA 17621 .......... .......... .......... .......... .......... .......... 333 ATTAAATCTT CATGAGAAGC AAAGCCAACA TCCAACAACC TTAATGGTAC TTAGAGATAT 17681 .......... .......... .......... .......... .......... .......... 333 GCAAATCAGT CAACCTAAAT GACACTACAT AACGATACGT AAACTGTGCG GCGAAACCCC 17741 .......... .......... .......... .......... .......... .......... 333 AAGTGTAGTG AAACCTTCAC ACAAAATTGT TGGTAATTTC CAAATTTTAT ATTTAAAGAA 17801 .......... .......... .......... .......... .......... .......... 333 AGGACTTAGC ATGGGATAAA TAACGAATAC AAATAGAGAT GCATCATAAA TTGAGTATCA 17861 .......... .......... .......... .......... .......... .......... 333 ATTAGCCGTT TTGCGCTTCA AACATTTGAA ACAAACTTGA ACCAATCATA AGAGGACAGC 17921 .......... .......... .......... .......... .......... .......... 333 CTCATCAAAT AAAACAGGAT CCCGATCACC TTATCACCCA AACATCTAAC ACACTAAGCG 17981 .......... .......... .......... .......... .......... .......... 333 AAAGGACCAT TCAATCGACC TACTACATGG CTGTGACCTC GGACAGCTAA CACAAGTGGC 18041 .......... .......... .......... .......... .......... .......... 333 CACCAAGATA AAGATGGCCT TTCAAACCAC AGATTTCCAA AATCCACACC ACCCATACGG 18101 .......... .......... .......... .......... .......... .......... 333 CATACAAAAC GAAACTTTCA TGCAAGACGC CTGACAAACA TGATATCTAA ACAAGATAAC 18161 .......... .......... .......... .......... .......... .......... 333 AAGTTTGGGA GATAAATACA TTATAGAGAA TAAACAACCC TCATATATTC TTAAAGCGAT 18221 .......... .......... .......... .......... .......... .......... 333 ACTCGAACCA AAAGCTTGAA GAAGGTTCGA TTGAAAAGAA GCTTACAACT ACAACTCCCG 18281 .......... .......... .......... .......... .......... .......... 333 CGAGATAGAC ATCATGAGCA AGCTTGGACG AGACAACAAG GGAAAATTAC ACTCTAAACA 18341 .......... .......... .......... .......... .......... .......... 333 TACATACATG CATACAAACA ATCCAAGAGC CTGCTTTAAC GAATAGACAT CGATACTCGG 18401 .......... .......... .......... .......... .......... .......... 333 ATTAATGAGT CATTTCACAG AAGCTCTTGC CAATATGTCT TAACAATCTC ATTCCAATCA 18461 .......... .......... .......... .......... .......... .......... 333 TGTGACGAAT AAATAGTGTT CTACGAGATT AAGCTAGCAT ATATTGAAAG TTCTAAATGG 18521 .......... .......... .......... .......... .......... .......... 333 CAAGCAAAGC AGCGACAGTG TTAACAAACC ACAAAGACAA GCTCAACCGA CCATGTATAT 18581 .......... .......... .......... .......... .......... .......... 333 TCACATTTTC GAGTATCTCA ACATGTTCGA CCACAAACTA AGAAAGGGCC AGCAAGTCGA 18641 .......... .......... .......... .......... .......... .......... 333 TTAACAAACA TCACATGTCA TACGGCGAAG GCTCCTCGAA ACAAATACAA AGTCATGACT 18701 .......... .......... .......... .......... .......... .......... 333 AACTCGTGAA GACAAACAGA GAAGCAATGT CGACGAACCA TCACATTGGG ACAGAATCAC 18761 .......... .......... .......... .......... .......... .......... 333 AACGTAAGAC ATATTCCAGA CTTAAACAAC CAAACGAAAT ATGATACCTC ATGTTGACAG 18821 .......... .......... .......... .......... .......... .......... 333 CACCACAAAC CACGACTCAA CTCCATAAAG AAAATTTAAA ATAATAAAGA AAAATGGGAC 18881 .......... .......... .......... .......... .......... .......... 333 ATGTACCTTT CTCGGAGCAG CGGAACAGGG ATGACGGCGA GCAGACGACG ATGACTTCCC 18941 .......... .......... .......... .......... .......... .......... 333 CACGCGACCC ACGGCTAGAC GTTTATCTCG TTTGTTCTTC GTATTGGAGT CCTATTCCCG 19001 .......... .......... .......... .......... .......... .......... 333 AAAAATCCCG ACTGTTTTGC TACACGAACA GGACAGGAAG AAATCTTCTT CAAAGTCTTC 19061 .......... .......... .......... .......... .......... .......... 333 CTAAACCAGA ATTTCTAACC AAATTTTCTA ACTTCTTTTG GTTATCTCAG AAACAATGGA 19121 .......... .......... .......... .......... .......... .......... 333 ATAAACCCAG AATTTCAAAC AACGTTCCCA ACCCAAAATT TCCTAACAAG AGACGGAAGA 19181 .......... .......... .......... .......... .......... .......... 333 AGCAGAGTCT TTTTTTTTCG AAAATTTTCT CAACCAAAAT CCCTAACCCT TTTCTGTGTC 19241 .......... .......... .......... .......... .......... .......... 333 TTTCTTTTCT TTTTCAAAAA TCTCAAATAT CTAACATTCT TTCAACTCCC AAAATTCCCA 19301 .......... .......... .......... .......... .......... .......... 333 GCGCTCCAAG TTCTGCTTTT CCGAATTTTT CGATGAAAAA ATCTCTCACC CCTTTTCTGA 19361 .......... .......... .......... .......... .......... .......... 333 TGAAGAAAAG GGGTATTTAT AGAGGAGAAG AAATAGCCCC CCTTTTCTCC TTTTGAAATC 19421 .......... .......... .......... .......... .......... .......... 333 GAAACTAAAT CCCGTTTCGG TCAAACTTCA CATGGCACAG GCGTGTTGGA GAGGATGAAA 19481 .......... .......... .......... .......... .......... .......... 333 TTGACACCTC GCAGACCTAC TCGACAGCGT ATGGGTCTCT GCGCTTCCGT TTGGTTCACG 19541 .......... .......... .......... .......... .......... .......... 333 CGAAGAGAAA GATGGAAGGA GAAGAGCGTG GGGTTGTTGG AGTCTCTCTG TTTTTCGCGT 19601 .......... .......... .......... .......... .......... .......... 333 GATTTCTGGG GAATTATGGG TTTTTGTCGA GAGGGGAAGG AGAGAGCGAG CGTGGGGGAG 19661 .......... .......... .......... .......... .......... .......... 333 ACGCGGGGAG AGGATAAGAG GAAGGGAGAG AGCGAGGAGA GAGCGTGGGG AGGGGGTCGC 19721 .......... .......... .......... .......... .......... .......... 333 GTGGCTGCGC ATCTGGGAAT TGTTTGGGAA TTTTGGCTTT CTGTTTTGCT GGGTTCGCGT 19781 .......... .......... .......... .......... .......... .......... 333 GGGGTGAGGG GAGAAGAAGG AAAGGGGAAC GGGTCGGGTC GGGTAGGATG GGTTCTGGGT 19841 .......... .......... .......... .......... .......... .......... 333 CGGGTAGGAT GGGTTATGGT GAATTGGGTT GGGCTGGAGA ATAAAAGAAT TGGGTGTTGG 19901 .......... .......... .......... .......... .......... .......... 333 GATTAATTTG TTGGGCTTGT TTTAAAAATG TGTGTTGGGT TGGTATTTTT TAAAAGAAAT 19961 .......... .......... .......... .......... .......... .......... 333 AAAAGGGGAT GTTGGACTGG GTTGAAGAGG ATGGGCGTCT GGGGGGAATT GGGCCTTGAG 20021 .......... .......... .......... .......... .......... .......... 333 TCTGTGGGCT GTTGGGAATA TTGGGTGTAA GGAATTTAGG CAAAATGGGT TGAGGACGAA 20081 .......... .......... .......... .......... .......... .......... 333 AGTGGGCCTC GGAATAAGAG TGGGCTGATG GGTAAAGGAA TGGGTTCAAG ATATACATAT 20141 .......... .......... .......... .......... .......... .......... 333 ATACATATAC ATATATGTAT ATACATATAT GTATATATGT ACATATATTT ATTTTCGCAA 20201 .......... .......... .......... .......... .......... .......... 333 GGTTTATAAA ACTAACTAAC TCATACCGAC GCGGGTCAAA ATTGGGTGTC AACAACTGTC 20261 .......... .......... .......... .......... .......... .......... 333 CCTCATTTTA CTTGGGTGGA TGCAAGCAAC TCGAGGAAAA TGAAGTTGAC CGAACCAATT 20321 .......... .......... .......... .......... .......... .......... 333 TTGACCAACT CCACTCGCCT TCAGGAAGAA GGATTTGTCA AAGAGTTTAG GAATTATGGC 20381 .......... .......... .......... .......... .......... .......... 333 CGAACCCTTG CAAACGGGTC TCCTACATAC CTCAGGCTAT ATGAGAATTC AGGCCACTTG 20441 ||||| |||||||||| .......... .......... .......... .......... .....AATTC AGGCCACTTG 348 TAGTTCGATA AGCTTGATTT ACCGCACGAT TTCAAAGAAT CAAAAGCCAC CTTGACACCG 20501 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGTTCGATA AGCTTGATTT ACCGCACGAT TTCAAAGAAT CAAAAGCCAC CTTGACACCG 408 AATTATGAAG GTATCGAAAT GCTCGAGAAT A 20532 |||||||||| |||||||||| |||||||||| | AATTATGAAG GTATCGAAAT GCTCGAGAAT A 439 hqPGS_C08HBa0235H18.1+_SGN-E397267- (20427 20532) ******************************************************************************** EST sequence 1217 -strand 736 n (File: SGN-E396454-) 1 CTGCCTCAAC GGGATACGTA GGCGCCACAA GGGCTCGGGT CATATATCTC GTAAATTCTA 61 TTCCCCCCTT TCTACAATAG AAACTGGGAC AGAATTTTGA GAGGGACTCA AAAATTCTCC 121 AGAAGGAACC TTCTCTTCAG CGGATCAAAC TAAAGACATT TCGAATTTGC GACTGGGACA 181 GAATTTTTTA GAAGATCTCA AAAATTCCGA GATCTGTTCG GTTACAATGG AAAGATGAAC 241 AAGATACTAA ACTGGGACAG AAATTTTGAG GATGGCCTCA AAATTTCGTC ATGGGACTTC 301 CCCACAAGTC TGGAATGCCT CTGAAATTCA TTCGACAAGC GTCGGACTCA AAGAAGCTCG 361 TTAAGCCTGA CATGACATGA CTTGGCATTG ACTTTTTCGA GATACTATTT CTTAAAAAAT 421 TTCTTGCTTC TCTTAAAAAT TTCCCTTTTA TATTTCATCT GTTTTGGCAT AAGATATTTT 481 CTTATCTATC AAGAGTCGAG AAATCGGGAA ATCAACCGAG GACGTCAAGA CAAGGAGCAA 541 ACAATCGAAG GGATCGACAC AGATCAGTAT GTTTAAAACT GACAATTTTT CTGTGGATGC 601 AGGTTTATAG CTTCACTTCG AAATCGGCCG AATTCAGGCC ACTTGTAGTT CGATAAGCTT 661 GATTTACCGC ACGATTTCAA AGAATCAAAA GCCACCTTGA CACCGAATTA TGAAGGTATC 721 GAAATGCTCG AGAATA Predicted gene structure (within gDNA segment 13526 to 21132): Exon 1 17082 17117 ( 36 n); cDNA 596 630 ( 35 n); score: 0.583 Intron 1 17118 20426 (3309 n); Pd: 0.470 (s: 0), Pa: 0.000 (s: 1.00) Exon 2 20427 20532 ( 106 n); cDNA 631 736 ( 106 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E396454- 1.000 142 0.193 C PGS_C08HBa0235H18.1+_SGN-E396454- (17082 17117,20427 20532) Alignment (genomic DNA sequence = upper lines): GATGAGGGTT TGGAGTTTCC TAATCCTAAG CTAACGGCAT TGAAAACAAA ATAAGATAAG 17141 |||| |||| | || || | || || | || GATGCAGGTT TATAGCTT-C ACTTCGAAAT CGGCCG.... .......... .......... 630 CAAATAGTAA AGAGAAGGAT AGAGAGAGAG AGATTTGGGT CCAACTCCGG GTTCTGTTAT 17201 .......... .......... .......... .......... .......... .......... 630 CCTTGACCGA ATGTTGGACC CACCTGCCTT TGGGTTTTTT AGCCCATTTC TGTACCTGTC 17261 .......... .......... .......... .......... .......... .......... 630 CTAATCTAAA CATACAAACA TAATATAGAA AACAAAAAAA CGACAAGAGG GCTTAGGCCC 17321 .......... .......... .......... .......... .......... .......... 630 ATTACAAAAT ATGCAAAGTA AAATAAAACG AAAGAAAAGT CTTTTAGTCC ATCGTCTTCA 17381 .......... .......... .......... .......... .......... .......... 630 ATCTCCATGA CCCTTGTCTT TCTACACTTG CTCGTTTTGA TGAATTGACT CGATAAAGTT 17441 .......... .......... .......... .......... .......... .......... 630 CAGAGTCTTC AAGACTCTCT CGAAATGCGA GGAGGATAAT GGGATTCCCA TAATGGACTC 17501 .......... .......... .......... .......... .......... .......... 630 ACGGGGAGTT TTCACATGTC ACAAAAAAAA CGATAAAATG AAGATTGGCA TTTTTAAAAC 17561 .......... .......... .......... .......... .......... .......... 630 TACAATTAGA ATAAGCAAGG TTCTAAAGCA TAACAAGGAT ATCTTTATAA TGCAATACTA 17621 .......... .......... .......... .......... .......... .......... 630 ATTAAATCTT CATGAGAAGC AAAGCCAACA TCCAACAACC TTAATGGTAC TTAGAGATAT 17681 .......... .......... .......... .......... .......... .......... 630 GCAAATCAGT CAACCTAAAT GACACTACAT AACGATACGT AAACTGTGCG GCGAAACCCC 17741 .......... .......... .......... .......... .......... .......... 630 AAGTGTAGTG AAACCTTCAC ACAAAATTGT TGGTAATTTC CAAATTTTAT ATTTAAAGAA 17801 .......... .......... .......... .......... .......... .......... 630 AGGACTTAGC ATGGGATAAA TAACGAATAC AAATAGAGAT GCATCATAAA TTGAGTATCA 17861 .......... .......... .......... .......... .......... .......... 630 ATTAGCCGTT TTGCGCTTCA AACATTTGAA ACAAACTTGA ACCAATCATA AGAGGACAGC 17921 .......... .......... .......... .......... .......... .......... 630 CTCATCAAAT AAAACAGGAT CCCGATCACC TTATCACCCA AACATCTAAC ACACTAAGCG 17981 .......... .......... .......... .......... .......... .......... 630 AAAGGACCAT TCAATCGACC TACTACATGG CTGTGACCTC GGACAGCTAA CACAAGTGGC 18041 .......... .......... .......... .......... .......... .......... 630 CACCAAGATA AAGATGGCCT TTCAAACCAC AGATTTCCAA AATCCACACC ACCCATACGG 18101 .......... .......... .......... .......... .......... .......... 630 CATACAAAAC GAAACTTTCA TGCAAGACGC CTGACAAACA TGATATCTAA ACAAGATAAC 18161 .......... .......... .......... .......... .......... .......... 630 AAGTTTGGGA GATAAATACA TTATAGAGAA TAAACAACCC TCATATATTC TTAAAGCGAT 18221 .......... .......... .......... .......... .......... .......... 630 ACTCGAACCA AAAGCTTGAA GAAGGTTCGA TTGAAAAGAA GCTTACAACT ACAACTCCCG 18281 .......... .......... .......... .......... .......... .......... 630 CGAGATAGAC ATCATGAGCA AGCTTGGACG AGACAACAAG GGAAAATTAC ACTCTAAACA 18341 .......... .......... .......... .......... .......... .......... 630 TACATACATG CATACAAACA ATCCAAGAGC CTGCTTTAAC GAATAGACAT CGATACTCGG 18401 .......... .......... .......... .......... .......... .......... 630 ATTAATGAGT CATTTCACAG AAGCTCTTGC CAATATGTCT TAACAATCTC ATTCCAATCA 18461 .......... .......... .......... .......... .......... .......... 630 TGTGACGAAT AAATAGTGTT CTACGAGATT AAGCTAGCAT ATATTGAAAG TTCTAAATGG 18521 .......... .......... .......... .......... .......... .......... 630 CAAGCAAAGC AGCGACAGTG TTAACAAACC ACAAAGACAA GCTCAACCGA CCATGTATAT 18581 .......... .......... .......... .......... .......... .......... 630 TCACATTTTC GAGTATCTCA ACATGTTCGA CCACAAACTA AGAAAGGGCC AGCAAGTCGA 18641 .......... .......... .......... .......... .......... .......... 630 TTAACAAACA TCACATGTCA TACGGCGAAG GCTCCTCGAA ACAAATACAA AGTCATGACT 18701 .......... .......... .......... .......... .......... .......... 630 AACTCGTGAA GACAAACAGA GAAGCAATGT CGACGAACCA TCACATTGGG ACAGAATCAC 18761 .......... .......... .......... .......... .......... .......... 630 AACGTAAGAC ATATTCCAGA CTTAAACAAC CAAACGAAAT ATGATACCTC ATGTTGACAG 18821 .......... .......... .......... .......... .......... .......... 630 CACCACAAAC CACGACTCAA CTCCATAAAG AAAATTTAAA ATAATAAAGA AAAATGGGAC 18881 .......... .......... .......... .......... .......... .......... 630 ATGTACCTTT CTCGGAGCAG CGGAACAGGG ATGACGGCGA GCAGACGACG ATGACTTCCC 18941 .......... .......... .......... .......... .......... .......... 630 CACGCGACCC ACGGCTAGAC GTTTATCTCG TTTGTTCTTC GTATTGGAGT CCTATTCCCG 19001 .......... .......... .......... .......... .......... .......... 630 AAAAATCCCG ACTGTTTTGC TACACGAACA GGACAGGAAG AAATCTTCTT CAAAGTCTTC 19061 .......... .......... .......... .......... .......... .......... 630 CTAAACCAGA ATTTCTAACC AAATTTTCTA ACTTCTTTTG GTTATCTCAG AAACAATGGA 19121 .......... .......... .......... .......... .......... .......... 630 ATAAACCCAG AATTTCAAAC AACGTTCCCA ACCCAAAATT TCCTAACAAG AGACGGAAGA 19181 .......... .......... .......... .......... .......... .......... 630 AGCAGAGTCT TTTTTTTTCG AAAATTTTCT CAACCAAAAT CCCTAACCCT TTTCTGTGTC 19241 .......... .......... .......... .......... .......... .......... 630 TTTCTTTTCT TTTTCAAAAA TCTCAAATAT CTAACATTCT TTCAACTCCC AAAATTCCCA 19301 .......... .......... .......... .......... .......... .......... 630 GCGCTCCAAG TTCTGCTTTT CCGAATTTTT CGATGAAAAA ATCTCTCACC CCTTTTCTGA 19361 .......... .......... .......... .......... .......... .......... 630 TGAAGAAAAG GGGTATTTAT AGAGGAGAAG AAATAGCCCC CCTTTTCTCC TTTTGAAATC 19421 .......... .......... .......... .......... .......... .......... 630 GAAACTAAAT CCCGTTTCGG TCAAACTTCA CATGGCACAG GCGTGTTGGA GAGGATGAAA 19481 .......... .......... .......... .......... .......... .......... 630 TTGACACCTC GCAGACCTAC TCGACAGCGT ATGGGTCTCT GCGCTTCCGT TTGGTTCACG 19541 .......... .......... .......... .......... .......... .......... 630 CGAAGAGAAA GATGGAAGGA GAAGAGCGTG GGGTTGTTGG AGTCTCTCTG TTTTTCGCGT 19601 .......... .......... .......... .......... .......... .......... 630 GATTTCTGGG GAATTATGGG TTTTTGTCGA GAGGGGAAGG AGAGAGCGAG CGTGGGGGAG 19661 .......... .......... .......... .......... .......... .......... 630 ACGCGGGGAG AGGATAAGAG GAAGGGAGAG AGCGAGGAGA GAGCGTGGGG AGGGGGTCGC 19721 .......... .......... .......... .......... .......... .......... 630 GTGGCTGCGC ATCTGGGAAT TGTTTGGGAA TTTTGGCTTT CTGTTTTGCT GGGTTCGCGT 19781 .......... .......... .......... .......... .......... .......... 630 GGGGTGAGGG GAGAAGAAGG AAAGGGGAAC GGGTCGGGTC GGGTAGGATG GGTTCTGGGT 19841 .......... .......... .......... .......... .......... .......... 630 CGGGTAGGAT GGGTTATGGT GAATTGGGTT GGGCTGGAGA ATAAAAGAAT TGGGTGTTGG 19901 .......... .......... .......... .......... .......... .......... 630 GATTAATTTG TTGGGCTTGT TTTAAAAATG TGTGTTGGGT TGGTATTTTT TAAAAGAAAT 19961 .......... .......... .......... .......... .......... .......... 630 AAAAGGGGAT GTTGGACTGG GTTGAAGAGG ATGGGCGTCT GGGGGGAATT GGGCCTTGAG 20021 .......... .......... .......... .......... .......... .......... 630 TCTGTGGGCT GTTGGGAATA TTGGGTGTAA GGAATTTAGG CAAAATGGGT TGAGGACGAA 20081 .......... .......... .......... .......... .......... .......... 630 AGTGGGCCTC GGAATAAGAG TGGGCTGATG GGTAAAGGAA TGGGTTCAAG ATATACATAT 20141 .......... .......... .......... .......... .......... .......... 630 ATACATATAC ATATATGTAT ATACATATAT GTATATATGT ACATATATTT ATTTTCGCAA 20201 .......... .......... .......... .......... .......... .......... 630 GGTTTATAAA ACTAACTAAC TCATACCGAC GCGGGTCAAA ATTGGGTGTC AACAACTGTC 20261 .......... .......... .......... .......... .......... .......... 630 CCTCATTTTA CTTGGGTGGA TGCAAGCAAC TCGAGGAAAA TGAAGTTGAC CGAACCAATT 20321 .......... .......... .......... .......... .......... .......... 630 TTGACCAACT CCACTCGCCT TCAGGAAGAA GGATTTGTCA AAGAGTTTAG GAATTATGGC 20381 .......... .......... .......... .......... .......... .......... 630 CGAACCCTTG CAAACGGGTC TCCTACATAC CTCAGGCTAT ATGAGAATTC AGGCCACTTG 20441 ||||| |||||||||| .......... .......... .......... .......... .....AATTC AGGCCACTTG 645 TAGTTCGATA AGCTTGATTT ACCGCACGAT TTCAAAGAAT CAAAAGCCAC CTTGACACCG 20501 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGTTCGATA AGCTTGATTT ACCGCACGAT TTCAAAGAAT CAAAAGCCAC CTTGACACCG 705 AATTATGAAG GTATCGAAAT GCTCGAGAAT A 20532 |||||||||| |||||||||| |||||||||| | AATTATGAAG GTATCGAAAT GCTCGAGAAT A 736 hqPGS_C08HBa0235H18.1+_SGN-E396454- (20427 20532) ******************************************************************************** EST sequence 1225 -strand 729 n (File: SGN-E391362-) 1 CAACGGGATA CGTAGGCGCC ACAAGGGCTC GGTCATATAT CTCGTAAATT CTATTCCCCC 61 CTTTCTACAA TAGAAACTGG GACAGAATTT TGAGAGGGAC TCAAAAATTC TCCAGAAGGA 121 ACCTTCTCTT CAGCGGATCA AACTAAAGAC ATTTCGAATT TGCGACTGGG ACAGAATTTT 181 TTAGAAGATC TCAAAAATTC CGAGATCTGT TCGGTTACAA TGGAAAGATG AACAAGATAC 241 TAAACTGGGA CAGAAATTTT GAGGATGGCC TCAAAATTTC GTCATGGGAC TTCCCCACAA 301 GTCTGGAATG CCTCTGAAAT TCATTCGACA AGCGTCGGAC TCAAAGAAGC TCGTTAAGCC 361 TGACATGACA TGACTTGGCA TTGACTTTTT CGAGATACTA TTTCTTAAAA AATTTCTTGC 421 TTCTCTTAAA AATTTCCCTT TTATATTTCA TCTGTTTTGG CATAAGATAT TTTCTTATCT 481 ATCAAGAGTC GAGAAATCGG GAAATCAACC GAGGACGTCA AGACAAGGAG CAAACAATCG 541 AAGGGATCGA CACAGATCAG TATGTTTAAA ACTGACAATT TTTCTGTGGA TGCAGGTTTA 601 TAGCTTCACT TCGAAATCGG CCGAATTCAG GCCACTTGTA GTTCGATAAG CTTGATTTAC 661 CGCACGATTT CAAAGAATCA AAAGCCACCT TGACACCGAA TTATGAAGGT ATCGAAATGC 721 TCGAGAATA Predicted gene structure (within gDNA segment 13596 to 21132): Exon 1 17082 17117 ( 36 n); cDNA 589 623 ( 35 n); score: 0.583 Intron 1 17118 20426 (3309 n); Pd: 0.470 (s: 0), Pa: 0.000 (s: 1.00) Exon 2 20427 20532 ( 106 n); cDNA 624 729 ( 106 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E391362- 1.000 142 0.195 C PGS_C08HBa0235H18.1+_SGN-E391362- (17082 17117,20427 20532) Alignment (genomic DNA sequence = upper lines): GATGAGGGTT TGGAGTTTCC TAATCCTAAG CTAACGGCAT TGAAAACAAA ATAAGATAAG 17141 |||| |||| | || || | || || | || GATGCAGGTT TATAGCTT-C ACTTCGAAAT CGGCCG.... .......... .......... 623 CAAATAGTAA AGAGAAGGAT AGAGAGAGAG AGATTTGGGT CCAACTCCGG GTTCTGTTAT 17201 .......... .......... .......... .......... .......... .......... 623 CCTTGACCGA ATGTTGGACC CACCTGCCTT TGGGTTTTTT AGCCCATTTC TGTACCTGTC 17261 .......... .......... .......... .......... .......... .......... 623 CTAATCTAAA CATACAAACA TAATATAGAA AACAAAAAAA CGACAAGAGG GCTTAGGCCC 17321 .......... .......... .......... .......... .......... .......... 623 ATTACAAAAT ATGCAAAGTA AAATAAAACG AAAGAAAAGT CTTTTAGTCC ATCGTCTTCA 17381 .......... .......... .......... .......... .......... .......... 623 ATCTCCATGA CCCTTGTCTT TCTACACTTG CTCGTTTTGA TGAATTGACT CGATAAAGTT 17441 .......... .......... .......... .......... .......... .......... 623 CAGAGTCTTC AAGACTCTCT CGAAATGCGA GGAGGATAAT GGGATTCCCA TAATGGACTC 17501 .......... .......... .......... .......... .......... .......... 623 ACGGGGAGTT TTCACATGTC ACAAAAAAAA CGATAAAATG AAGATTGGCA TTTTTAAAAC 17561 .......... .......... .......... .......... .......... .......... 623 TACAATTAGA ATAAGCAAGG TTCTAAAGCA TAACAAGGAT ATCTTTATAA TGCAATACTA 17621 .......... .......... .......... .......... .......... .......... 623 ATTAAATCTT CATGAGAAGC AAAGCCAACA TCCAACAACC TTAATGGTAC TTAGAGATAT 17681 .......... .......... .......... .......... .......... .......... 623 GCAAATCAGT CAACCTAAAT GACACTACAT AACGATACGT AAACTGTGCG GCGAAACCCC 17741 .......... .......... .......... .......... .......... .......... 623 AAGTGTAGTG AAACCTTCAC ACAAAATTGT TGGTAATTTC CAAATTTTAT ATTTAAAGAA 17801 .......... .......... .......... .......... .......... .......... 623 AGGACTTAGC ATGGGATAAA TAACGAATAC AAATAGAGAT GCATCATAAA TTGAGTATCA 17861 .......... .......... .......... .......... .......... .......... 623 ATTAGCCGTT TTGCGCTTCA AACATTTGAA ACAAACTTGA ACCAATCATA AGAGGACAGC 17921 .......... .......... .......... .......... .......... .......... 623 CTCATCAAAT AAAACAGGAT CCCGATCACC TTATCACCCA AACATCTAAC ACACTAAGCG 17981 .......... .......... .......... .......... .......... .......... 623 AAAGGACCAT TCAATCGACC TACTACATGG CTGTGACCTC GGACAGCTAA CACAAGTGGC 18041 .......... .......... .......... .......... .......... .......... 623 CACCAAGATA AAGATGGCCT TTCAAACCAC AGATTTCCAA AATCCACACC ACCCATACGG 18101 .......... .......... .......... .......... .......... .......... 623 CATACAAAAC GAAACTTTCA TGCAAGACGC CTGACAAACA TGATATCTAA ACAAGATAAC 18161 .......... .......... .......... .......... .......... .......... 623 AAGTTTGGGA GATAAATACA TTATAGAGAA TAAACAACCC TCATATATTC TTAAAGCGAT 18221 .......... .......... .......... .......... .......... .......... 623 ACTCGAACCA AAAGCTTGAA GAAGGTTCGA TTGAAAAGAA GCTTACAACT ACAACTCCCG 18281 .......... .......... .......... .......... .......... .......... 623 CGAGATAGAC ATCATGAGCA AGCTTGGACG AGACAACAAG GGAAAATTAC ACTCTAAACA 18341 .......... .......... .......... .......... .......... .......... 623 TACATACATG CATACAAACA ATCCAAGAGC CTGCTTTAAC GAATAGACAT CGATACTCGG 18401 .......... .......... .......... .......... .......... .......... 623 ATTAATGAGT CATTTCACAG AAGCTCTTGC CAATATGTCT TAACAATCTC ATTCCAATCA 18461 .......... .......... .......... .......... .......... .......... 623 TGTGACGAAT AAATAGTGTT CTACGAGATT AAGCTAGCAT ATATTGAAAG TTCTAAATGG 18521 .......... .......... .......... .......... .......... .......... 623 CAAGCAAAGC AGCGACAGTG TTAACAAACC ACAAAGACAA GCTCAACCGA CCATGTATAT 18581 .......... .......... .......... .......... .......... .......... 623 TCACATTTTC GAGTATCTCA ACATGTTCGA CCACAAACTA AGAAAGGGCC AGCAAGTCGA 18641 .......... .......... .......... .......... .......... .......... 623 TTAACAAACA TCACATGTCA TACGGCGAAG GCTCCTCGAA ACAAATACAA AGTCATGACT 18701 .......... .......... .......... .......... .......... .......... 623 AACTCGTGAA GACAAACAGA GAAGCAATGT CGACGAACCA TCACATTGGG ACAGAATCAC 18761 .......... .......... .......... .......... .......... .......... 623 AACGTAAGAC ATATTCCAGA CTTAAACAAC CAAACGAAAT ATGATACCTC ATGTTGACAG 18821 .......... .......... .......... .......... .......... .......... 623 CACCACAAAC CACGACTCAA CTCCATAAAG AAAATTTAAA ATAATAAAGA AAAATGGGAC 18881 .......... .......... .......... .......... .......... .......... 623 ATGTACCTTT CTCGGAGCAG CGGAACAGGG ATGACGGCGA GCAGACGACG ATGACTTCCC 18941 .......... .......... .......... .......... .......... .......... 623 CACGCGACCC ACGGCTAGAC GTTTATCTCG TTTGTTCTTC GTATTGGAGT CCTATTCCCG 19001 .......... .......... .......... .......... .......... .......... 623 AAAAATCCCG ACTGTTTTGC TACACGAACA GGACAGGAAG AAATCTTCTT CAAAGTCTTC 19061 .......... .......... .......... .......... .......... .......... 623 CTAAACCAGA ATTTCTAACC AAATTTTCTA ACTTCTTTTG GTTATCTCAG AAACAATGGA 19121 .......... .......... .......... .......... .......... .......... 623 ATAAACCCAG AATTTCAAAC AACGTTCCCA ACCCAAAATT TCCTAACAAG AGACGGAAGA 19181 .......... .......... .......... .......... .......... .......... 623 AGCAGAGTCT TTTTTTTTCG AAAATTTTCT CAACCAAAAT CCCTAACCCT TTTCTGTGTC 19241 .......... .......... .......... .......... .......... .......... 623 TTTCTTTTCT TTTTCAAAAA TCTCAAATAT CTAACATTCT TTCAACTCCC AAAATTCCCA 19301 .......... .......... .......... .......... .......... .......... 623 GCGCTCCAAG TTCTGCTTTT CCGAATTTTT CGATGAAAAA ATCTCTCACC CCTTTTCTGA 19361 .......... .......... .......... .......... .......... .......... 623 TGAAGAAAAG GGGTATTTAT AGAGGAGAAG AAATAGCCCC CCTTTTCTCC TTTTGAAATC 19421 .......... .......... .......... .......... .......... .......... 623 GAAACTAAAT CCCGTTTCGG TCAAACTTCA CATGGCACAG GCGTGTTGGA GAGGATGAAA 19481 .......... .......... .......... .......... .......... .......... 623 TTGACACCTC GCAGACCTAC TCGACAGCGT ATGGGTCTCT GCGCTTCCGT TTGGTTCACG 19541 .......... .......... .......... .......... .......... .......... 623 CGAAGAGAAA GATGGAAGGA GAAGAGCGTG GGGTTGTTGG AGTCTCTCTG TTTTTCGCGT 19601 .......... .......... .......... .......... .......... .......... 623 GATTTCTGGG GAATTATGGG TTTTTGTCGA GAGGGGAAGG AGAGAGCGAG CGTGGGGGAG 19661 .......... .......... .......... .......... .......... .......... 623 ACGCGGGGAG AGGATAAGAG GAAGGGAGAG AGCGAGGAGA GAGCGTGGGG AGGGGGTCGC 19721 .......... .......... .......... .......... .......... .......... 623 GTGGCTGCGC ATCTGGGAAT TGTTTGGGAA TTTTGGCTTT CTGTTTTGCT GGGTTCGCGT 19781 .......... .......... .......... .......... .......... .......... 623 GGGGTGAGGG GAGAAGAAGG AAAGGGGAAC GGGTCGGGTC GGGTAGGATG GGTTCTGGGT 19841 .......... .......... .......... .......... .......... .......... 623 CGGGTAGGAT GGGTTATGGT GAATTGGGTT GGGCTGGAGA ATAAAAGAAT TGGGTGTTGG 19901 .......... .......... .......... .......... .......... .......... 623 GATTAATTTG TTGGGCTTGT TTTAAAAATG TGTGTTGGGT TGGTATTTTT TAAAAGAAAT 19961 .......... .......... .......... .......... .......... .......... 623 AAAAGGGGAT GTTGGACTGG GTTGAAGAGG ATGGGCGTCT GGGGGGAATT GGGCCTTGAG 20021 .......... .......... .......... .......... .......... .......... 623 TCTGTGGGCT GTTGGGAATA TTGGGTGTAA GGAATTTAGG CAAAATGGGT TGAGGACGAA 20081 .......... .......... .......... .......... .......... .......... 623 AGTGGGCCTC GGAATAAGAG TGGGCTGATG GGTAAAGGAA TGGGTTCAAG ATATACATAT 20141 .......... .......... .......... .......... .......... .......... 623 ATACATATAC ATATATGTAT ATACATATAT GTATATATGT ACATATATTT ATTTTCGCAA 20201 .......... .......... .......... .......... .......... .......... 623 GGTTTATAAA ACTAACTAAC TCATACCGAC GCGGGTCAAA ATTGGGTGTC AACAACTGTC 20261 .......... .......... .......... .......... .......... .......... 623 CCTCATTTTA CTTGGGTGGA TGCAAGCAAC TCGAGGAAAA TGAAGTTGAC CGAACCAATT 20321 .......... .......... .......... .......... .......... .......... 623 TTGACCAACT CCACTCGCCT TCAGGAAGAA GGATTTGTCA AAGAGTTTAG GAATTATGGC 20381 .......... .......... .......... .......... .......... .......... 623 CGAACCCTTG CAAACGGGTC TCCTACATAC CTCAGGCTAT ATGAGAATTC AGGCCACTTG 20441 ||||| |||||||||| .......... .......... .......... .......... .....AATTC AGGCCACTTG 638 TAGTTCGATA AGCTTGATTT ACCGCACGAT TTCAAAGAAT CAAAAGCCAC CTTGACACCG 20501 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGTTCGATA AGCTTGATTT ACCGCACGAT TTCAAAGAAT CAAAAGCCAC CTTGACACCG 698 AATTATGAAG GTATCGAAAT GCTCGAGAAT A 20532 |||||||||| |||||||||| |||||||||| | AATTATGAAG GTATCGAAAT GCTCGAGAAT A 729 hqPGS_C08HBa0235H18.1+_SGN-E391362- (20427 20532) ******************************************************************************** EST sequence 436 -strand 736 n (File: SGN-E396454-) 1 CTGCCTCAAC GGGATACGTA GGCGCCACAA GGGCTCGGGT CATATATCTC GTAAATTCTA 61 TTCCCCCCTT TCTACAATAG AAACTGGGAC AGAATTTTGA GAGGGACTCA AAAATTCTCC 121 AGAAGGAACC TTCTCTTCAG CGGATCAAAC TAAAGACATT TCGAATTTGC GACTGGGACA 181 GAATTTTTTA GAAGATCTCA AAAATTCCGA GATCTGTTCG GTTACAATGG AAAGATGAAC 241 AAGATACTAA ACTGGGACAG AAATTTTGAG GATGGCCTCA AAATTTCGTC ATGGGACTTC 301 CCCACAAGTC TGGAATGCCT CTGAAATTCA TTCGACAAGC GTCGGACTCA AAGAAGCTCG 361 TTAAGCCTGA CATGACATGA CTTGGCATTG ACTTTTTCGA GATACTATTT CTTAAAAAAT 421 TTCTTGCTTC TCTTAAAAAT TTCCCTTTTA TATTTCATCT GTTTTGGCAT AAGATATTTT 481 CTTATCTATC AAGAGTCGAG AAATCGGGAA ATCAACCGAG GACGTCAAGA CAAGGAGCAA 541 ACAATCGAAG GGATCGACAC AGATCAGTAT GTTTAAAACT GACAATTTTT CTGTGGATGC 601 AGGTTTATAG CTTCACTTCG AAATCGGCCG AATTCAGGCC ACTTGTAGTT CGATAAGCTT 661 GATTTACCGC ACGATTTCAA AGAATCAAAA GCCACCTTGA CACCGAATTA TGAAGGTATC 721 GAAATGCTCG AGAATA Predicted gene structure (within gDNA segment 24054 to 21201): Exon 1 23444 22803 ( 642 n); cDNA 1 643 ( 643 n); score: 0.990 MATCH C08HBa0235H18.1- SGN-E396454- 0.990 642 0.872 C PGS_C08HBa0235H18.1-_SGN-E396454- (23444 22803) Alignment (genomic DNA sequence = upper lines): CTGCCTCAAC GGGATACGTA GGCGCCACAA GGGCTC-GGT CATATATCTC GTAAATTCTA 23386 |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| CTGCCTCAAC GGGATACGTA GGCGCCACAA GGGCTCGGGT CATATATCTC GTAAATTCTA 60 TTCCCCCCTT TCTACAATAG AAACTGGGAC AGAATTTTGA GAGGGACTCA AAAATTCTCC 23326 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCCCCCTT TCTACAATAG AAACTGGGAC AGAATTTTGA GAGGGACTCA AAAATTCTCC 120 AGAAGGAACC TTCTCTTCAG CGGATCAAAC TAAAGACATT TCGAATTTGC GACTGGGACA 23266 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAGGAACC TTCTCTTCAG CGGATCAAAC TAAAGACATT TCGAATTTGC GACTGGGACA 180 GAATTTTTTA GAAGATCTCA AAAATTCCGA GATCTGTTCG GTTACAATGG AAAGATGAAC 23206 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAATTTTTTA GAAGATCTCA AAAATTCCGA GATCTGTTCG GTTACAATGG AAAGATGAAC 240 AAGATACTAA ACTGGGACAG AAATTTTGAG GATGGCCTCA AAATTTCGTC ATGGGACTTC 23146 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGATACTAA ACTGGGACAG AAATTTTGAG GATGGCCTCA AAATTTCGTC ATGGGACTTC 300 CCCACAAGTC TGGAATGCCT CTGAAATTCA TTCGACAAGC GTCGGACTCA AAGAAGCTCG 23086 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCACAAGTC TGGAATGCCT CTGAAATTCA TTCGACAAGC GTCGGACTCA AAGAAGCTCG 360 TTAAGCCTGA CATGACATGA CTTGGCATTG ACTTTTTCGA GATACTATTT CTTAAAAAAT 23026 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAAGCCTGA CATGACATGA CTTGGCATTG ACTTTTTCGA GATACTATTT CTTAAAAAAT 420 TTCTTGCTTC TCTTAAAAAT TTCCCTTTTA TATTTCATCT GTTTTGGCAT AAGATATTTT 22966 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTGCTTC TCTTAAAAAT TTCCCTTTTA TATTTCATCT GTTTTGGCAT AAGATATTTT 480 CTTATCTATC AAGAGTCGAG AAATCGGGAA ATCAACCGAG GACGTCAAGA CAAGGAGCAA 22906 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTATCTATC AAGAGTCGAG AAATCGGGAA ATCAACCGAG GACGTCAAGA CAAGGAGCAA 540 ACAATCGAAG GGATCGACAC AGATCAGTAT GTTTAAAACT GACAATTTTT CTGTGGATGC 22846 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAATCGAAG GGATCGACAC AGATCAGTAT GTTTAAAACT GACAATTTTT CTGTGGATGC 600 AGGTTTATAG CTTCACTTCG AAATCGGCCG AATTCTTCCG ACT 22803 |||||||||| |||||||||| |||||||||| ||||| | ||| AGGTTTATAG CTTCACTTCG AAATCGGCCG AATTCAGGCC ACT 643 hqPGS_C08HBa0235H18.1-_SGN-E396454- (23444 22803) ******************************************************************************** EST sequence 441 -strand 729 n (File: SGN-E391362-) 1 CAACGGGATA CGTAGGCGCC ACAAGGGCTC GGTCATATAT CTCGTAAATT CTATTCCCCC 61 CTTTCTACAA TAGAAACTGG GACAGAATTT TGAGAGGGAC TCAAAAATTC TCCAGAAGGA 121 ACCTTCTCTT CAGCGGATCA AACTAAAGAC ATTTCGAATT TGCGACTGGG ACAGAATTTT 181 TTAGAAGATC TCAAAAATTC CGAGATCTGT TCGGTTACAA TGGAAAGATG AACAAGATAC 241 TAAACTGGGA CAGAAATTTT GAGGATGGCC TCAAAATTTC GTCATGGGAC TTCCCCACAA 301 GTCTGGAATG CCTCTGAAAT TCATTCGACA AGCGTCGGAC TCAAAGAAGC TCGTTAAGCC 361 TGACATGACA TGACTTGGCA TTGACTTTTT CGAGATACTA TTTCTTAAAA AATTTCTTGC 421 TTCTCTTAAA AATTTCCCTT TTATATTTCA TCTGTTTTGG CATAAGATAT TTTCTTATCT 481 ATCAAGAGTC GAGAAATCGG GAAATCAACC GAGGACGTCA AGACAAGGAG CAAACAATCG 541 AAGGGATCGA CACAGATCAG TATGTTTAAA ACTGACAATT TTTCTGTGGA TGCAGGTTTA 601 TAGCTTCACT TCGAAATCGG CCGAATTCAG GCCACTTGTA GTTCGATAAG CTTGATTTAC 661 CGCACGATTT CAAAGAATCA AAAGCCACCT TGACACCGAA TTATGAAGGT ATCGAAATGC 721 TCGAGAATA Predicted gene structure (within gDNA segment 24048 to 21201): Exon 1 23438 22803 ( 636 n); cDNA 1 636 ( 636 n); score: 0.994 MATCH C08HBa0235H18.1- SGN-E391362- 0.994 636 0.872 C PGS_C08HBa0235H18.1-_SGN-E391362- (23438 22803) Alignment (genomic DNA sequence = upper lines): CAACGGGATA CGTAGGCGCC ACAAGGGCTC GGTCATATAT CTCGTAAATT CTATTCCCCC 23379 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACGGGATA CGTAGGCGCC ACAAGGGCTC GGTCATATAT CTCGTAAATT CTATTCCCCC 60 CTTTCTACAA TAGAAACTGG GACAGAATTT TGAGAGGGAC TCAAAAATTC TCCAGAAGGA 23319 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTCTACAA TAGAAACTGG GACAGAATTT TGAGAGGGAC TCAAAAATTC TCCAGAAGGA 120 ACCTTCTCTT CAGCGGATCA AACTAAAGAC ATTTCGAATT TGCGACTGGG ACAGAATTTT 23259 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTTCTCTT CAGCGGATCA AACTAAAGAC ATTTCGAATT TGCGACTGGG ACAGAATTTT 180 TTAGAAGATC TCAAAAATTC CGAGATCTGT TCGGTTACAA TGGAAAGATG AACAAGATAC 23199 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAGAAGATC TCAAAAATTC CGAGATCTGT TCGGTTACAA TGGAAAGATG AACAAGATAC 240 TAAACTGGGA CAGAAATTTT GAGGATGGCC TCAAAATTTC GTCATGGGAC TTCCCCACAA 23139 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAACTGGGA CAGAAATTTT GAGGATGGCC TCAAAATTTC GTCATGGGAC TTCCCCACAA 300 GTCTGGAATG CCTCTGAAAT TCATTCGACA AGCGTCGGAC TCAAAGAAGC TCGTTAAGCC 23079 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCTGGAATG CCTCTGAAAT TCATTCGACA AGCGTCGGAC TCAAAGAAGC TCGTTAAGCC 360 TGACATGACA TGACTTGGCA TTGACTTTTT CGAGATACTA TTTCTTAAAA AATTTCTTGC 23019 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACATGACA TGACTTGGCA TTGACTTTTT CGAGATACTA TTTCTTAAAA AATTTCTTGC 420 TTCTCTTAAA AATTTCCCTT TTATATTTCA TCTGTTTTGG CATAAGATAT TTTCTTATCT 22959 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTCTTAAA AATTTCCCTT TTATATTTCA TCTGTTTTGG CATAAGATAT TTTCTTATCT 480 ATCAAGAGTC GAGAAATCGG GAAATCAACC GAGGACGTCA AGACAAGGAG CAAACAATCG 22899 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCAAGAGTC GAGAAATCGG GAAATCAACC GAGGACGTCA AGACAAGGAG CAAACAATCG 540 AAGGGATCGA CACAGATCAG TATGTTTAAA ACTGACAATT TTTCTGTGGA TGCAGGTTTA 22839 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGGATCGA CACAGATCAG TATGTTTAAA ACTGACAATT TTTCTGTGGA TGCAGGTTTA 600 TAGCTTCACT TCGAAATCGG CCGAATTCTT CCGACT 22803 |||||||||| |||||||||| |||||||| | ||| TAGCTTCACT TCGAAATCGG CCGAATTCAG GCCACT 636 hqPGS_C08HBa0235H18.1-_SGN-E391362- (23438 22803) ******************************************************************************** EST sequence 384 -strand 674 n (File: SGN-E397010-) 1 CCCCCCTTTC TCCAATAGAA AATGGACAGA AATTTTGAGA GGGACTCAAA AATTCTCCAG 61 AAGGAACCTT CTCTTCAGCG GATCAAACTA AAGACATTTC GAATTTGCGA CTGGGACAGA 121 ATTTTTTAGA AGATCTCAAA AATTCCGAGA TCTGTTCGGT TACAATGGAA AGATGAACAA 181 GATACTAAAC TGGGACAGAA ATTTTGAGGA TGGCCTCAAA ATTTCGTCAT GGGACTTCCC 241 CACAAGTCTG GAATGCCTCT GAAATTCATT CGACAAGCGT CGGACTCAAA GAAGCTCGTT 301 AAGCCTGACA TGACATGACT TGGCATTGAC TTTTTCGAGA TACTATTTCT TAAAAAATTT 361 CTTGCTTCTC TTAAAAATTT CCCTTTTATA TTTCATCTGT TTTGGCATAA GATATTTTCT 421 TATCTATCAA GAGTCGAGAA ATCGGGAAAT CAACCGAGGA CGTCAAGACA AGGAGCAAAC 481 AATCGAAGGG ATCGACACAG ATCAGTATGT TTAAAACTGA CAATTTTTCT GTGGATGCAG 541 GTTTATAGCT TCACTTCGAA ATCGGCCGAA TTCAGGCCAC TTGTAGTTCG ATAAGCTTGA 601 TTTACCGCAC GATTTCAAAG AATCAAAAGC CACCTTGACA CCGAATTATG AAGGTATCGA 661 AATGCTCGAG AATA Predicted gene structure (within gDNA segment 24273 to 21201): Exon 1 23383 22803 ( 581 n); cDNA 1 581 ( 581 n); score: 0.984 MATCH C08HBa0235H18.1- SGN-E397010- 0.984 581 0.862 C PGS_C08HBa0235H18.1-_SGN-E397010- (23383 22803) Alignment (genomic DNA sequence = upper lines): CCCCCCTTTC TACAATAGAA ACTGGGACAG -AATTTTGAG AGGGACTCAA AAATTCTCCA 23325 |||||||||| | |||||||| | | |||||| ||||||||| |||||||||| |||||||||| CCCCCCTTTC TCCAATAGAA AAT-GGACAG AAATTTTGAG AGGGACTCAA AAATTCTCCA 59 GAAGGAACCT TCTCTTCAGC GGATCAAACT AAAGACATTT CGAATTTGCG ACTGGGACAG 23265 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGGAACCT TCTCTTCAGC GGATCAAACT AAAGACATTT CGAATTTGCG ACTGGGACAG 119 AATTTTTTAG AAGATCTCAA AAATTCCGAG ATCTGTTCGG TTACAATGGA AAGATGAACA 23205 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTTTTTAG AAGATCTCAA AAATTCCGAG ATCTGTTCGG TTACAATGGA AAGATGAACA 179 AGATACTAAA CTGGGACAGA AATTTTGAGG ATGGCCTCAA AATTTCGTCA TGGGACTTCC 23145 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATACTAAA CTGGGACAGA AATTTTGAGG ATGGCCTCAA AATTTCGTCA TGGGACTTCC 239 CCACAAGTCT GGAATGCCTC TGAAATTCAT TCGACAAGCG TCGGACTCAA AGAAGCTCGT 23085 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCACAAGTCT GGAATGCCTC TGAAATTCAT TCGACAAGCG TCGGACTCAA AGAAGCTCGT 299 TAAGCCTGAC ATGACATGAC TTGGCATTGA CTTTTTCGAG ATACTATTTC TTAAAAAATT 23025 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGCCTGAC ATGACATGAC TTGGCATTGA CTTTTTCGAG ATACTATTTC TTAAAAAATT 359 TCTTGCTTCT CTTAAAAATT TCCCTTTTAT ATTTCATCTG TTTTGGCATA AGATATTTTC 22965 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTGCTTCT CTTAAAAATT TCCCTTTTAT ATTTCATCTG TTTTGGCATA AGATATTTTC 419 TTATCTATCA AGAGTCGAGA AATCGGGAAA TCAACCGAGG ACGTCAAGAC AAGGAGCAAA 22905 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTATCTATCA AGAGTCGAGA AATCGGGAAA TCAACCGAGG ACGTCAAGAC AAGGAGCAAA 479 CAATCGAAGG GATCGACACA GATCAGTATG TTTAAAACTG ACAATTTTTC TGTGGATGCA 22845 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAATCGAAGG GATCGACACA GATCAGTATG TTTAAAACTG ACAATTTTTC TGTGGATGCA 539 GGTTTATAGC TTCACTTCGA AATCGGCCGA ATTCTTCCGA CT 22803 |||||||||| |||||||||| |||||||||| |||| | | || GGTTTATAGC TTCACTTCGA AATCGGCCGA ATTCAGGCCA CT 581 hqPGS_C08HBa0235H18.1-_SGN-E397010- (23383 22803) ******************************************************************************** EST sequence 4 -strand 668 n (File: SGN-E391444-) 1 TTTTTACAAT AGAAACTGGG ACAGAATTTT GAGAGGGACT CAAAAATTCT CCAGAAGGAA 61 CCTTCTTTTC AGCGGATCAA ACTAAAGACA TTTCGAATTT GCGACTGGGA CAGAATTTTT 121 TAGAAGATCT CAAAAATTCC GAGATCTGTT CGGTTACAAT GGAAAGATGA ACAAGATACT 181 AAACTGGGAC AGAAATTTTG AGGATGGCCT CAAAATTTCG TCATGGGACT TCCCCACAAG 241 TCTGGAATGC CTCTGAAATT CATTCGACAA GCGTCGGACT CAAAGAAGCT CGTTAAGCCT 301 GACATGACAT GACTTGGCAT TGACTTTTTC GAGATACTAT TTCTTAAAAA ATTTCTTGCT 361 TCTCTTAAAA ATTTCCCTTT TATATTTCAT CTGTTTTGGC ATAAGATATT TTCTTATCTA 421 TCAAGAGTCG AGAAATCGGG AAATCAACCG AGGACGTCAA GACAAGGAGC AAACAATCGA 481 AGGGATCGAC ACAGATCAGT ATGTTTAAAA CTGACAATTT TTCTGTGGAT GCAGGTTTAT 541 AGCTTCACTT CGAAATCGGC CGAATTCAGG CCACTTGTAG TTCGATAAGC TTGATTTACC 601 GCACGATTTC AAAGAATCAA AAGCCACCTT GACACCGAAT TATGAAGGTA TCGAAATGCT 661 CGAGAATA Predicted gene structure (within gDNA segment 24023 to 21201): Exon 1 23377 22803 ( 575 n); cDNA 1 575 ( 575 n); score: 0.990 MATCH C08HBa0235H18.1- SGN-E391444- 0.990 575 0.861 C PGS_C08HBa0235H18.1-_SGN-E391444- (23377 22803) Alignment (genomic DNA sequence = upper lines): TTTCTACAAT AGAAACTGGG ACAGAATTTT GAGAGGGACT CAAAAATTCT CCAGAAGGAA 23318 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTTACAAT AGAAACTGGG ACAGAATTTT GAGAGGGACT CAAAAATTCT CCAGAAGGAA 60 CCTTCTCTTC AGCGGATCAA ACTAAAGACA TTTCGAATTT GCGACTGGGA CAGAATTTTT 23258 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTCTTTTC AGCGGATCAA ACTAAAGACA TTTCGAATTT GCGACTGGGA CAGAATTTTT 120 TAGAAGATCT CAAAAATTCC GAGATCTGTT CGGTTACAAT GGAAAGATGA ACAAGATACT 23198 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGAAGATCT CAAAAATTCC GAGATCTGTT CGGTTACAAT GGAAAGATGA ACAAGATACT 180 AAACTGGGAC AGAAATTTTG AGGATGGCCT CAAAATTTCG TCATGGGACT TCCCCACAAG 23138 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACTGGGAC AGAAATTTTG AGGATGGCCT CAAAATTTCG TCATGGGACT TCCCCACAAG 240 TCTGGAATGC CTCTGAAATT CATTCGACAA GCGTCGGACT CAAAGAAGCT CGTTAAGCCT 23078 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTGGAATGC CTCTGAAATT CATTCGACAA GCGTCGGACT CAAAGAAGCT CGTTAAGCCT 300 GACATGACAT GACTTGGCAT TGACTTTTTC GAGATACTAT TTCTTAAAAA ATTTCTTGCT 23018 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACATGACAT GACTTGGCAT TGACTTTTTC GAGATACTAT TTCTTAAAAA ATTTCTTGCT 360 TCTCTTAAAA ATTTCCCTTT TATATTTCAT CTGTTTTGGC ATAAGATATT TTCTTATCTA 22958 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTCTTAAAA ATTTCCCTTT TATATTTCAT CTGTTTTGGC ATAAGATATT TTCTTATCTA 420 TCAAGAGTCG AGAAATCGGG AAATCAACCG AGGACGTCAA GACAAGGAGC AAACAATCGA 22898 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAGAGTCG AGAAATCGGG AAATCAACCG AGGACGTCAA GACAAGGAGC AAACAATCGA 480 AGGGATCGAC ACAGATCAGT ATGTTTAAAA CTGACAATTT TTCTGTGGAT GCAGGTTTAT 22838 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGATCGAC ACAGATCAGT ATGTTTAAAA CTGACAATTT TTCTGTGGAT GCAGGTTTAT 540 AGCTTCACTT CGAAATCGGC CGAATTCTTC CGACT 22803 |||||||||| |||||||||| ||||||| | ||| AGCTTCACTT CGAAATCGGC CGAATTCAGG CCACT 575 hqPGS_C08HBa0235H18.1-_SGN-E391444- (23377 22803) ******************************************************************************** EST sequence 366 -strand 664 n (File: SGN-E396735-) 1 TACAATAGAA ACTGGGACAG AATTTTGAGA GGGACTCAAA AATTCTCCAG AAGGAACTTT 61 CTCTTCAGCG GATCAAACTA AAGACATTTC GAATTTGCGA CTGGGACAGA ATTTTTTAGA 121 AGATCTCAAA AATTCCGAGA TCTGTTCGGT TACAATGGAA AGATGAACAA GATACTAAAC 181 TGGGACAGAA ATTTTGAGGA TGGCCTCAAA ATTTCGTCAT GGGACTTCCC CACAAGTCTG 241 GAATGCCTCT GAAATTCATT CGACAAGCGT CGGACTCAAA GAAGCTCGTT AAGCCTGACA 301 TGACATGACT TGGCATTGAC TTTTTCGAGA TACTATTTCT TAAAAAATTT CTTGCTTCTC 361 TTAAAAATTT CCCTTTTATA TTTCATCTGT TTTGGCATAA GATATTTTCT TATCTATCAA 421 GAGTCGAGAA ATCGGGAAAT CAACCGAGGA CGTCAAGACA AGGAGCAAAC AATCGAAGGG 481 ATCGACACAG ATCAGTATGT TTAAAACTGA CAATTTTTCT GTGGATGCAG GTTTATAGCT 541 TCACTTCGAA ATCGGCCGAA TTCAGGCCAC TTGTAGTTCG ATAAGCTTGA TTTACCGCAC 601 GATTTCAAAG AATCAAAAGC CACCTTGACA CCGAATTATG AAGGTATCGA AATGCTCGAG 661 AATA Predicted gene structure (within gDNA segment 23983 to 21201): Exon 1 23373 22803 ( 571 n); cDNA 1 571 ( 571 n); score: 0.991 MATCH C08HBa0235H18.1- SGN-E396735- 0.991 571 0.860 C PGS_C08HBa0235H18.1-_SGN-E396735- (23373 22803) Alignment (genomic DNA sequence = upper lines): TACAATAGAA ACTGGGACAG AATTTTGAGA GGGACTCAAA AATTCTCCAG AAGGAACCTT 23314 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || TACAATAGAA ACTGGGACAG AATTTTGAGA GGGACTCAAA AATTCTCCAG AAGGAACTTT 60 CTCTTCAGCG GATCAAACTA AAGACATTTC GAATTTGCGA CTGGGACAGA ATTTTTTAGA 23254 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCTTCAGCG GATCAAACTA AAGACATTTC GAATTTGCGA CTGGGACAGA ATTTTTTAGA 120 AGATCTCAAA AATTCCGAGA TCTGTTCGGT TACAATGGAA AGATGAACAA GATACTAAAC 23194 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATCTCAAA AATTCCGAGA TCTGTTCGGT TACAATGGAA AGATGAACAA GATACTAAAC 180 TGGGACAGAA ATTTTGAGGA TGGCCTCAAA ATTTCGTCAT GGGACTTCCC CACAAGTCTG 23134 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGGACAGAA ATTTTGAGGA TGGCCTCAAA ATTTCGTCAT GGGACTTCCC CACAAGTCTG 240 GAATGCCTCT GAAATTCATT CGACAAGCGT CGGACTCAAA GAAGCTCGTT AAGCCTGACA 23074 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAATGCCTCT GAAATTCATT CGACAAGCGT CGGACTCAAA GAAGCTCGTT AAGCCTGACA 300 TGACATGACT TGGCATTGAC TTTTTCGAGA TACTATTTCT TAAAAAATTT CTTGCTTCTC 23014 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACATGACT TGGCATTGAC TTTTTCGAGA TACTATTTCT TAAAAAATTT CTTGCTTCTC 360 TTAAAAATTT CCCTTTTATA TTTCATCTGT TTTGGCATAA GATATTTTCT TATCTATCAA 22954 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAAAAATTT CCCTTTTATA TTTCATCTGT TTTGGCATAA GATATTTTCT TATCTATCAA 420 GAGTCGAGAA ATCGGGAAAT CAACCGAGGA CGTCAAGACA AGGAGCAAAC AATCGAAGGG 22894 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGTCGAGAA ATCGGGAAAT CAACCGAGGA CGTCAAGACA AGGAGCAAAC AATCGAAGGG 480 ATCGACACAG ATCAGTATGT TTAAAACTGA CAATTTTTCT GTGGATGCAG GTTTATAGCT 22834 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCGACACAG ATCAGTATGT TTAAAACTGA CAATTTTTCT GTGGATGCAG GTTTATAGCT 540 TCACTTCGAA ATCGGCCGAA TTCTTCCGAC T 22803 |||||||||| |||||||||| ||| | || | TCACTTCGAA ATCGGCCGAA TTCAGGCCAC T 571 hqPGS_C08HBa0235H18.1-_SGN-E396735- (23373 22803) ******************************************************************************** EST sequence 382 -strand 662 n (File: SGN-E390817-) 1 CAATAGAAAC GGGGACAGAA TTTTGAGAGG GACTCAAAAA TTCTCCAGAA GGAACNTTCT 61 CTTCAGCGGA TCAAACTAAA GACATTTCGA ATTTGCGACT GGGACAGAAT TTTTTAGAAG 121 ATCTCAAAAA TTCCGAGATC TGTTCGGTTA CAATGGAAAG ATGAACAAGA TACTAAACTG 181 GGACAGAAAT TTTGAGGATG GCCTCAAAAT TTCGTCATGG GACTTCCCCA CAAGTCTGGA 241 ATGCCTCTGA AATTCATTCG ACAAGCGTCG GACTCAAAGA AGCTCGTTAA GCCTGACATG 301 ACATGACTTG GCATTGACTT TTTCGAGATA CTATTTCTTA AAAAATTTCT TGCTTCTCTT 361 AAAAATTTCC CTTTTATATT TCATCTGTTT TGGCATAAGA TATTTTCTTA TCTATCAAGA 421 GTCGAGAAAT CGGGAAATCA ACCGAGGACG TCAAGACAAG GAGCAAACAA TCGAAGGGAT 481 CGACACAGAT CAGTATGTTT AAAACTGACA ATTTTTCTGT GGATGCAGGT TTATAGCTTC 541 ACTTCGAAAT CGGCCGAATT CAGGCCACTT GTAGTTCGAT AAGCTTGATT TACCGCACGA 601 TTTCAAAGAA TCAAAAGCCA CCTTGACACC GAATTATGAA GGTATCGAAA TGCTCGAGAA 661 TA Predicted gene structure (within gDNA segment 24083 to 21201): Exon 1 23371 22803 ( 569 n); cDNA 1 569 ( 569 n); score: 0.989 MATCH C08HBa0235H18.1- SGN-E390817- 0.989 569 0.860 C PGS_C08HBa0235H18.1-_SGN-E390817- (23371 22803) Alignment (genomic DNA sequence = upper lines): CAATAGAAAC TGGGACAGAA TTTTGAGAGG GACTCAAAAA TTCTCCAGAA GGAACCTTCT 23312 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CAATAGAAAC GGGGACAGAA TTTTGAGAGG GACTCAAAAA TTCTCCAGAA GGAACNTTCT 60 CTTCAGCGGA TCAAACTAAA GACATTTCGA ATTTGCGACT GGGACAGAAT TTTTTAGAAG 23252 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTCAGCGGA TCAAACTAAA GACATTTCGA ATTTGCGACT GGGACAGAAT TTTTTAGAAG 120 ATCTCAAAAA TTCCGAGATC TGTTCGGTTA CAATGGAAAG ATGAACAAGA TACTAAACTG 23192 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCTCAAAAA TTCCGAGATC TGTTCGGTTA CAATGGAAAG ATGAACAAGA TACTAAACTG 180 GGACAGAAAT TTTGAGGATG GCCTCAAAAT TTCGTCATGG GACTTCCCCA CAAGTCTGGA 23132 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGACAGAAAT TTTGAGGATG GCCTCAAAAT TTCGTCATGG GACTTCCCCA CAAGTCTGGA 240 ATGCCTCTGA AATTCATTCG ACAAGCGTCG GACTCAAAGA AGCTCGTTAA GCCTGACATG 23072 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGCCTCTGA AATTCATTCG ACAAGCGTCG GACTCAAAGA AGCTCGTTAA GCCTGACATG 300 ACATGACTTG GCATTGACTT TTTCGAGATA CTATTTCTTA AAAAATTTCT TGCTTCTCTT 23012 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATGACTTG GCATTGACTT TTTCGAGATA CTATTTCTTA AAAAATTTCT TGCTTCTCTT 360 AAAAATTTCC CTTTTATATT TCATCTGTTT TGGCATAAGA TATTTTCTTA TCTATCAAGA 22952 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAATTTCC CTTTTATATT TCATCTGTTT TGGCATAAGA TATTTTCTTA TCTATCAAGA 420 GTCGAGAAAT CGGGAAATCA ACCGAGGACG TCAAGACAAG GAGCAAACAA TCGAAGGGAT 22892 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCGAGAAAT CGGGAAATCA ACCGAGGACG TCAAGACAAG GAGCAAACAA TCGAAGGGAT 480 CGACACAGAT CAGTATGTTT AAAACTGACA ATTTTTCTGT GGATGCAGGT TTATAGCTTC 22832 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGACACAGAT CAGTATGTTT AAAACTGACA ATTTTTCTGT GGATGCAGGT TTATAGCTTC 540 ACTTCGAAAT CGGCCGAATT CTTCCGACT 22803 |||||||||| |||||||||| | | ||| ACTTCGAAAT CGGCCGAATT CAGGCCACT 569 hqPGS_C08HBa0235H18.1-_SGN-E390817- (23371 22803) ******************************************************************************** EST sequence 371 -strand 657 n (File: SGN-E396661-) 1 GAAACTGGGA CAGAATTTTG AGAGGGACTC AAAAATTCTC CAGAAGGAAC CTTCTCTTCA 61 GCGGATCAAA CTAAAGACAT TTCGAATTTG CGACTGGGAC AGAATTTTTT AGAAGATCTC 121 AAAAATTCCG AGATCTGTTC GGTTACAATG GAAAGATGAA CAAGATACTA AACTGGGACA 181 GAAATTTTGA GGATGGCCTC AAAATTTCGT CATGGGACTT CCCCACAAGT CTGGAATGCC 241 TCTGAAATTC ATTCGACAAG CGTCGGACTC AAAGAAGCTC GTTAAGCCTG ACATGACATG 301 ACTTGGCATT GACTTTTTCG AGATACTATT TCTTAAAAAA TTTCTTGCTT CTCTTAAAAA 361 TTTCCCTTTT ATATTTCATC TGTTTTGGCA TAAGATATTT TCTTATCTAT CAAGAGTCGA 421 GAAATCGGGA AATCAACCGA GGACGTCAAG ACAAGGAGCA AACAATCGAA GGGATCGACA 481 CAGATCAGTA TGTTTAAAAC TGACAATTTT TCTGTGGATG CAGGTTTATA GCTTCACTTC 541 GAAATCGGCC GAATTCAGGC CACTTGTAGT TCGATAAGCT TGATTTACCG CACGATTTCA 601 AAGAATCAAA AGCCACCTTG ACACCGAATT ATGAAGGTAT CGAAATGCTC GAGAATA Predicted gene structure (within gDNA segment 23976 to 21201): Exon 1 23366 22803 ( 564 n); cDNA 1 564 ( 564 n); score: 0.993 MATCH C08HBa0235H18.1- SGN-E396661- 0.993 564 0.858 C PGS_C08HBa0235H18.1-_SGN-E396661- (23366 22803) Alignment (genomic DNA sequence = upper lines): GAAACTGGGA CAGAATTTTG AGAGGGACTC AAAAATTCTC CAGAAGGAAC CTTCTCTTCA 23307 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAACTGGGA CAGAATTTTG AGAGGGACTC AAAAATTCTC CAGAAGGAAC CTTCTCTTCA 60 GCGGATCAAA CTAAAGACAT TTCGAATTTG CGACTGGGAC AGAATTTTTT AGAAGATCTC 23247 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGGATCAAA CTAAAGACAT TTCGAATTTG CGACTGGGAC AGAATTTTTT AGAAGATCTC 120 AAAAATTCCG AGATCTGTTC GGTTACAATG GAAAGATGAA CAAGATACTA AACTGGGACA 23187 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAATTCCG AGATCTGTTC GGTTACAATG GAAAGATGAA CAAGATACTA AACTGGGACA 180 GAAATTTTGA GGATGGCCTC AAAATTTCGT CATGGGACTT CCCCACAAGT CTGGAATGCC 23127 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAATTTTGA GGATGGCCTC AAAATTTCGT CATGGGACTT CCCCACAAGT CTGGAATGCC 240 TCTGAAATTC ATTCGACAAG CGTCGGACTC AAAGAAGCTC GTTAAGCCTG ACATGACATG 23067 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTGAAATTC ATTCGACAAG CGTCGGACTC AAAGAAGCTC GTTAAGCCTG ACATGACATG 300 ACTTGGCATT GACTTTTTCG AGATACTATT TCTTAAAAAA TTTCTTGCTT CTCTTAAAAA 23007 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTGGCATT GACTTTTTCG AGATACTATT TCTTAAAAAA TTTCTTGCTT CTCTTAAAAA 360 TTTCCCTTTT ATATTTCATC TGTTTTGGCA TAAGATATTT TCTTATCTAT CAAGAGTCGA 22947 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCCCTTTT ATATTTCATC TGTTTTGGCA TAAGATATTT TCTTATCTAT CAAGAGTCGA 420 GAAATCGGGA AATCAACCGA GGACGTCAAG ACAAGGAGCA AACAATCGAA GGGATCGACA 22887 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAATCGGGA AATCAACCGA GGACGTCAAG ACAAGGAGCA AACAATCGAA GGGATCGACA 480 CAGATCAGTA TGTTTAAAAC TGACAATTTT TCTGTGGATG CAGGTTTATA GCTTCACTTC 22827 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGATCAGTA TGTTTAAAAC TGACAATTTT TCTGTGGATG CAGGTTTATA GCTTCACTTC 540 GAAATCGGCC GAATTCTTCC GACT 22803 |||||||||| |||||| | ||| GAAATCGGCC GAATTCAGGC CACT 564 hqPGS_C08HBa0235H18.1-_SGN-E396661- (23366 22803) ******************************************************************************** EST sequence 369 -strand 653 n (File: SGN-E395324-) 1 CTGGGACAGA ATTTTGAGAG GGACTCAAAA ATTCTCCAGA AGGAACCTTC TCTTCAGCGG 61 ATCAAACTAA AGACATTTCG AATTTGCGAC TGGGACAGAA TTTTTTAGAA GATCTCAAAA 121 ATTCCGAGAT CTGTTCGGTT ACAATGGAAA GATGAACAAG ATACTAAACT GGGACAGAAA 181 TTTTGAGGAT GGCCTCAAAA TTTCGTCATG GGACTTCCCC ACAAGTCTGG AATGCCTCTG 241 AAATTCATTC GACAAGCGTC GGACTCAAAG AAGCTCGTTA AGCCTGACAT GACATGACTT 301 GGCATTGACT TTTTCGAGAT ACTATTTCTT AAAAAATTTC TTGCTTCTCT TAAAAATTTC 361 CCTTTTATAT TTCATCTGTT TTGGCATAAG ATATTTTCTT ATCTATCAAG AGTCGAGAAA 421 TCGGGAAATC AACCGAGGAC GTCAAGACAA GGAGCAAACA ATCGAAGGGA TCGACACAGA 481 TCAGTATGTT TAAAACTGAC AATTTTTCTG TGGATGCAGG TTTATAGCTT CACTTCGAAA 541 TCGGCCGAAT TCAGGCCACT TGTAGTTCGA TAAGCTTGAT TTACCGCACG ATTTCAAAGA 601 ATCAAAAGCC ACCTTGACAC CGAATTATGA AGGTATCGAA ATGCTCGAGA ATA Predicted gene structure (within gDNA segment 23973 to 21201): Exon 1 23362 22803 ( 560 n); cDNA 1 560 ( 560 n); score: 0.993 MATCH C08HBa0235H18.1- SGN-E395324- 0.993 560 0.858 C PGS_C08HBa0235H18.1-_SGN-E395324- (23362 22803) Alignment (genomic DNA sequence = upper lines): CTGGGACAGA ATTTTGAGAG GGACTCAAAA ATTCTCCAGA AGGAACCTTC TCTTCAGCGG 23303 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGGGACAGA ATTTTGAGAG GGACTCAAAA ATTCTCCAGA AGGAACCTTC TCTTCAGCGG 60 ATCAAACTAA AGACATTTCG AATTTGCGAC TGGGACAGAA TTTTTTAGAA GATCTCAAAA 23243 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCAAACTAA AGACATTTCG AATTTGCGAC TGGGACAGAA TTTTTTAGAA GATCTCAAAA 120 ATTCCGAGAT CTGTTCGGTT ACAATGGAAA GATGAACAAG ATACTAAACT GGGACAGAAA 23183 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTCCGAGAT CTGTTCGGTT ACAATGGAAA GATGAACAAG ATACTAAACT GGGACAGAAA 180 TTTTGAGGAT GGCCTCAAAA TTTCGTCATG GGACTTCCCC ACAAGTCTGG AATGCCTCTG 23123 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTGAGGAT GGCCTCAAAA TTTCGTCATG GGACTTCCCC ACAAGTCTGG AATGCCTCTG 240 AAATTCATTC GACAAGCGTC GGACTCAAAG AAGCTCGTTA AGCCTGACAT GACATGACTT 23063 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATTCATTC GACAAGCGTC GGACTCAAAG AAGCTCGTTA AGCCTGACAT GACATGACTT 300 GGCATTGACT TTTTCGAGAT ACTATTTCTT AAAAAATTTC TTGCTTCTCT TAAAAATTTC 23003 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCATTGACT TTTTCGAGAT ACTATTTCTT AAAAAATTTC TTGCTTCTCT TAAAAATTTC 360 CCTTTTATAT TTCATCTGTT TTGGCATAAG ATATTTTCTT ATCTATCAAG AGTCGAGAAA 22943 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTTTATAT TTCATCTGTT TTGGCATAAG ATATTTTCTT ATCTATCAAG AGTCGAGAAA 420 TCGGGAAATC AACCGAGGAC GTCAAGACAA GGAGCAAACA ATCGAAGGGA TCGACACAGA 22883 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGGGAAATC AACCGAGGAC GTCAAGACAA GGAGCAAACA ATCGAAGGGA TCGACACAGA 480 TCAGTATGTT TAAAACTGAC AATTTTTCTG TGGATGCAGG TTTATAGCTT CACTTCGAAA 22823 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAGTATGTT TAAAACTGAC AATTTTTCTG TGGATGCAGG TTTATAGCTT CACTTCGAAA 540 TCGGCCGAAT TCTTCCGACT 22803 |||||||||| || | ||| TCGGCCGAAT TCAGGCCACT 560 hqPGS_C08HBa0235H18.1-_SGN-E395324- (23362 22803) ******************************************************************************** EST sequence 381 -strand 593 n (File: SGN-E397114-) 1 ATCAAATTAA AGACATTTCG AATTTGCGAC TGGGACAGAA TTTTTTAGAA GATCTCAAAA 61 ATTCCGAGAT CTGTTCGGTT ACAATGGAAA GATGAACAAG ATACTAAACT GGGACAGAAA 121 TTTTGAGGAT GGCCTCAAAA TTTCGTCATG GGACTTCCCC ACAAGTCTGG AATGCCTCTG 181 AAATTCATTC GACAAGCGTC GGACTCAAAG AAGCTCGTTA AGCCTGACAT GACATGACTT 241 GGCATTGACT TTTTCGAGAT ACTATTTCTT AAAAAATTTC TTGCTTCTCT TAAAAATTTC 301 CCTTTTATAT TTCATCTGTT TTGGCATAAG ATATTTTCTT ATCTATCAAG AGTCGAGAAA 361 TCGGGAAATC AACCGAGGAC GTCAAGACAA GGAGCAAACA ATCGAAGGGA TCGACACAGA 421 TCAGTATGTT TAAAACTGAC AATTTTTCTG TGGATGCAGG TTTATAGCTT CACTTCGAAA 481 TCGGCCGAAT TCAGGCCACT TGTAGTTCGA TAAGCTTGAT TTACCGCACG ATTTCAAAGA 541 ATCAAAAGCC ACCTTGACAC CGAATTATGA AGGTATCGAA ATGCTCGAGA ATA Predicted gene structure (within gDNA segment 23975 to 21201): Exon 1 23302 22803 ( 500 n); cDNA 1 500 ( 500 n); score: 0.990 MATCH C08HBa0235H18.1- SGN-E397114- 0.990 500 0.843 C PGS_C08HBa0235H18.1-_SGN-E397114- (23302 22803) Alignment (genomic DNA sequence = upper lines): ATCAAACTAA AGACATTTCG AATTTGCGAC TGGGACAGAA TTTTTTAGAA GATCTCAAAA 23243 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCAAATTAA AGACATTTCG AATTTGCGAC TGGGACAGAA TTTTTTAGAA GATCTCAAAA 60 ATTCCGAGAT CTGTTCGGTT ACAATGGAAA GATGAACAAG ATACTAAACT GGGACAGAAA 23183 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTCCGAGAT CTGTTCGGTT ACAATGGAAA GATGAACAAG ATACTAAACT GGGACAGAAA 120 TTTTGAGGAT GGCCTCAAAA TTTCGTCATG GGACTTCCCC ACAAGTCTGG AATGCCTCTG 23123 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTGAGGAT GGCCTCAAAA TTTCGTCATG GGACTTCCCC ACAAGTCTGG AATGCCTCTG 180 AAATTCATTC GACAAGCGTC GGACTCAAAG AAGCTCGTTA AGCCTGACAT GACATGACTT 23063 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATTCATTC GACAAGCGTC GGACTCAAAG AAGCTCGTTA AGCCTGACAT GACATGACTT 240 GGCATTGACT TTTTCGAGAT ACTATTTCTT AAAAAATTTC TTGCTTCTCT TAAAAATTTC 23003 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCATTGACT TTTTCGAGAT ACTATTTCTT AAAAAATTTC TTGCTTCTCT TAAAAATTTC 300 CCTTTTATAT TTCATCTGTT TTGGCATAAG ATATTTTCTT ATCTATCAAG AGTCGAGAAA 22943 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTTTATAT TTCATCTGTT TTGGCATAAG ATATTTTCTT ATCTATCAAG AGTCGAGAAA 360 TCGGGAAATC AACCGAGGAC GTCAAGACAA GGAGCAAACA ATCGAAGGGA TCGACACAGA 22883 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGGGAAATC AACCGAGGAC GTCAAGACAA GGAGCAAACA ATCGAAGGGA TCGACACAGA 420 TCAGTATGTT TAAAACTGAC AATTTTTCTG TGGATGCAGG TTTATAGCTT CACTTCGAAA 22823 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAGTATGTT TAAAACTGAC AATTTTTCTG TGGATGCAGG TTTATAGCTT CACTTCGAAA 480 TCGGCCGAAT TCTTCCGACT 22803 |||||||||| || | ||| TCGGCCGAAT TCAGGCCACT 500 hqPGS_C08HBa0235H18.1-_SGN-E397114- (23302 22803) ******************************************************************************** EST sequence 3 -strand 585 n (File: SGN-E391490-) 1 AGACATTTCG AATTTGCGAC TGGGACAGAA ATTTTTTAGA AGATCTCAAA AAATTCCGAG 61 ATCTGTTCGG TTACAATGGA AAGATGAACA AGATACTAAA CTGGGACAGA AATTATGAGG 121 ATGGCCTCAA AATTTCGTCA TGGGACTTCC CCACAAGTCT GGAATGCCTC TGAAATTCAT 181 TCGACAAGCG TCGGACTCAA AGAAGCTCGT TAAGCCTGAC ATGACATGAC TTGGCATTGA 241 CTTTTTCGAG ATACTATTTC TTAAAAAATT TCTTGCTTCT CTTAAAAATT TCCCTTTTAT 301 ATTTCATCTG TTTTGGCATA AGATATTTTC TTATCTATCA AGAGTCGAGA AATCGGGAAA 361 TCAACCGAGG ACGTCAAGAC AAGGAGCAAA CAATCGAAGG GATCGACACA GATCAGTATG 421 TTTAAAACTG ACAATTTTTC TGTGGATGCA GGTTTATAGC TTCACTTCGA AATCGGCCGA 481 ATTCAGGCCA CTTGTAGTTC GATAAGCTTG ATTTACCGCA CGATTTCAAA GAATCAAAAG 541 CCACCTTGAC ACCGAATTAT GAAGGTATCG AAATGCTCGA GAATA Predicted gene structure (within gDNA segment 23902 to 21201): Exon 1 23292 22803 ( 490 n); cDNA 1 492 ( 492 n); score: 0.980 MATCH C08HBa0235H18.1- SGN-E391490- 0.980 490 0.838 C PGS_C08HBa0235H18.1-_SGN-E391490- (23292 22803) Alignment (genomic DNA sequence = upper lines): AGACATTTCG AATTTGCGAC TGGGACAG-A ATTTTTTAGA AGATCTC-AA AAATTCCGAG 23235 |||||||||| |||||||||| |||||||| | |||||||||| ||||||| || |||||||||| AGACATTTCG AATTTGCGAC TGGGACAGAA ATTTTTTAGA AGATCTCAAA AAATTCCGAG 60 ATCTGTTCGG TTACAATGGA AAGATGAACA AGATACTAAA CTGGGACAGA AATTTTGAGG 23175 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| ATCTGTTCGG TTACAATGGA AAGATGAACA AGATACTAAA CTGGGACAGA AATTATGAGG 120 ATGGCCTCAA AATTTCGTCA TGGGACTTCC CCACAAGTCT GGAATGCCTC TGAAATTCAT 23115 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGCCTCAA AATTTCGTCA TGGGACTTCC CCACAAGTCT GGAATGCCTC TGAAATTCAT 180 TCGACAAGCG TCGGACTCAA AGAAGCTCGT TAAGCCTGAC ATGACATGAC TTGGCATTGA 23055 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGACAAGCG TCGGACTCAA AGAAGCTCGT TAAGCCTGAC ATGACATGAC TTGGCATTGA 240 CTTTTTCGAG ATACTATTTC TTAAAAAATT TCTTGCTTCT CTTAAAAATT TCCCTTTTAT 22995 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTTTCGAG ATACTATTTC TTAAAAAATT TCTTGCTTCT CTTAAAAATT TCCCTTTTAT 300 ATTTCATCTG TTTTGGCATA AGATATTTTC TTATCTATCA AGAGTCGAGA AATCGGGAAA 22935 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTCATCTG TTTTGGCATA AGATATTTTC TTATCTATCA AGAGTCGAGA AATCGGGAAA 360 TCAACCGAGG ACGTCAAGAC AAGGAGCAAA CAATCGAAGG GATCGACACA GATCAGTATG 22875 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAACCGAGG ACGTCAAGAC AAGGAGCAAA CAATCGAAGG GATCGACACA GATCAGTATG 420 TTTAAAACTG ACAATTTTTC TGTGGATGCA GGTTTATAGC TTCACTTCGA AATCGGCCGA 22815 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTAAAACTG ACAATTTTTC TGTGGATGCA GGTTTATAGC TTCACTTCGA AATCGGCCGA 480 ATTCTTCCGA CT 22803 |||| | | || ATTCAGGCCA CT 492 hqPGS_C08HBa0235H18.1-_SGN-E391490- (23292 22803) ******************************************************************************** EST sequence 385 -strand 506 n (File: SGN-E397205-) 1 AAAGATGAAC AAGATACTAA ACTGGGACAG AAATTTTGAG GATGGCCTCA AAATTTCGTC 61 ATGGGACTTC CCCACAAGTC TGGAATGCCT CTGAAATTCA TTCGACAAGC GTCGGACTCA 121 AAGAAGCTCG TTAAGCCTGA CATGACATGA CTTGGCATTG ACTTTTTCGA GATACTATTT 181 CTTAAAAAAT TTCTTGCTTC TCTTAAAAAT TTCCCTTTTA TATTTCATCT GTTTTGGCAT 241 AAGATATTTT CTTATCTATC AAGAGTCGAG AAATCGGGAA ATCAACCGAG GACGTCAAGA 301 CAAGGAGCAA ACAATCGAAG GGATCGACAC AGATCAGTAT GTTTAAAACT GACAATTTTT 361 CTGTGGATGC AGGTTTATAG CTTCACTTCG AAATCGGCCG AATTCAGGCC ACTTGTAGTT 421 CGATAAGCTT GATTTACCGC ACGATTTCAA AGAATCAAAA GCCACCTTGA CACCGAATTA 481 TGAAGGTATC GAAATGCTCG AGAATA Predicted gene structure (within gDNA segment 23825 to 21201): Exon 1 23215 22803 ( 413 n); cDNA 1 413 ( 413 n); score: 0.990 MATCH C08HBa0235H18.1- SGN-E397205- 0.990 413 0.816 C PGS_C08HBa0235H18.1-_SGN-E397205- (23215 22803) Alignment (genomic DNA sequence = upper lines): AAAGATGAAC AAGATACTAA ACTGGGACAG AAATTTTGAG GATGGCCTCA AAATTTCGTC 23156 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGATGAAC AAGATACTAA ACTGGGACAG AAATTTTGAG GATGGCCTCA AAATTTCGTC 60 ATGGGACTTC CCCACAAGTC TGGAATGCCT CTGAAATTCA TTCGACAAGC GTCGGACTCA 23096 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGGACTTC CCCACAAGTC TGGAATGCCT CTGAAATTCA TTCGACAAGC GTCGGACTCA 120 AAGAAGCTCG TTAAGCCTGA CATGACATGA CTTGGCATTG ACTTTTTCGA GATACTATTT 23036 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGAAGCTCG TTAAGCCTGA CATGACATGA CTTGGCATTG ACTTTTTCGA GATACTATTT 180 CTTAAAAAAT TTCTTGCTTC TCTTAAAAAT TTCCCTTTTA TATTTCATCT GTTTTGGCAT 22976 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTAAAAAAT TTCTTGCTTC TCTTAAAAAT TTCCCTTTTA TATTTCATCT GTTTTGGCAT 240 AAGATATTTT CTTATCTATC AAGAGTCGAG AAATCGGGAA ATCAACCGAG GACGTCAAGA 22916 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGATATTTT CTTATCTATC AAGAGTCGAG AAATCGGGAA ATCAACCGAG GACGTCAAGA 300 CAAGGAGCAA ACAATCGAAG GGATCGACAC AGATCAGTAT GTTTAAAACT GACAATTTTT 22856 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGGAGCAA ACAATCGAAG GGATCGACAC AGATCAGTAT GTTTAAAACT GACAATTTTT 360 CTGTGGATGC AGGTTTATAG CTTCACTTCG AAATCGGCCG AATTCTTCCG ACT 22803 |||||||||| |||||||||| |||||||||| |||||||||| ||||| | ||| CTGTGGATGC AGGTTTATAG CTTCACTTCG AAATCGGCCG AATTCAGGCC ACT 413 hqPGS_C08HBa0235H18.1-_SGN-E397205- (23215 22803) ******************************************************************************** EST sequence 412 -strand 439 n (File: SGN-E397267-) 1 CCCCCCCAAT TCTGGAATCC TTTTGAAATT CATTCGACCA GGCGTCGGAT TCAAAGAAGC 61 TCGTTAAGCC TGACATGACA CGACTGGGCA TTGACTTTTT CGAGATACTA TTTCTTAAAA 121 AATTTCTTGC TTCTCTTAAA AATTTCCCTT TTATATTTCA TCTGTTTTGG CATAAGATAT 181 TTTCTTATCT ATCAAGAGTC GAGAAATCGG GAAATCAACC GAGGACGTCA AGACAAGGAG 241 CAAACAATCG AAGGGATCGA CACAGATCAG TATGTTTAAA ACTGACAATT TTTCTGTGGA 301 TGCAGGTTTA TAGCTTCACT TCGAAATCGG CCGAATTCAG GCCACTTGTA GTTCGATAAG 361 CTTGATTTAC CGCACGATTT CAAAGAATCA AAAGCCACCT TGACACCGAA TTATGAAGGT 421 ATCGAAATGC TCGAGAATA Predicted gene structure (within gDNA segment 24208 to 21201): Exon 1 23146 22803 ( 344 n); cDNA 2 346 ( 345 n); score: 0.955 MATCH C08HBa0235H18.1- SGN-E397267- 0.955 344 0.784 C PGS_C08HBa0235H18.1-_SGN-E397267- (23146 22803) Alignment (genomic DNA sequence = upper lines): CCCCACAAGT CTGGAATGCC TCTGAAATTC ATTCGA-CAA GCGTCGGACT CAAAGAAGCT 23088 |||| ||| | ||||||| | | |||||||| |||||| || |||||||| | |||||||||| CCCCCCAATT CTGGAATCCT TTTGAAATTC ATTCGACCAG GCGTCGGATT CAAAGAAGCT 61 CGTTAAGCCT GACATGACAT GACTTGGCAT TGACTTTTTC GAGATACTAT TTCTTAAAAA 23028 |||||||||| ||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| CGTTAAGCCT GACATGACAC GACTGGGCAT TGACTTTTTC GAGATACTAT TTCTTAAAAA 121 ATTTCTTGCT TCTCTTAAAA ATTTCCCTTT TATATTTCAT CTGTTTTGGC ATAAGATATT 22968 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTCTTGCT TCTCTTAAAA ATTTCCCTTT TATATTTCAT CTGTTTTGGC ATAAGATATT 181 TTCTTATCTA TCAAGAGTCG AGAAATCGGG AAATCAACCG AGGACGTCAA GACAAGGAGC 22908 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTATCTA TCAAGAGTCG AGAAATCGGG AAATCAACCG AGGACGTCAA GACAAGGAGC 241 AAACAATCGA AGGGATCGAC ACAGATCAGT ATGTTTAAAA CTGACAATTT TTCTGTGGAT 22848 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACAATCGA AGGGATCGAC ACAGATCAGT ATGTTTAAAA CTGACAATTT TTCTGTGGAT 301 GCAGGTTTAT AGCTTCACTT CGAAATCGGC CGAATTCTTC CGACT 22803 |||||||||| |||||||||| |||||||||| ||||||| | ||| GCAGGTTTAT AGCTTCACTT CGAAATCGGC CGAATTCAGG CCACT 346 hqPGS_C08HBa0235H18.1-_SGN-E397267- (23146 22803) ******************************************************************************** EST sequence 370 -strand 436 n (File: SGN-E396750-) 1 CCCACAAGTC TGGAATGCCT CTGAAATTCA TTCGACAAGC GTCGGACTCA AAGAAGCTCG 61 TTAAGCCTGA CATGACATGA CTTGGCATTG ACTTTTTCGA GATACTATTT CTTAAAAAAT 121 TTCTTGCTTC TCTTAAAAAT TTCCCTTTTA TATTTCATCT GTTTTGGCAT AAGATATTTT 181 CTTATCTATC AAGAGTCGAG AAATCGGGAA ATCAACCGAG GACGTCAAGA CAAGGAGCAA 241 ACAATCGAAG GGATCGACAC AGATCAGTAT GTTTAAAACT GACAATTTTT CTGTGGATGC 301 AGGTTTATAG CTTCACTTCG AAATCGGCCG AATTCAGGCC ACTTGTAGTT CGATAAGCTT 361 GATTTACCGC ACGATTTCAA AGAATCAAAA GCCACCTTGA CACCGAATTA TGAAGGTATC 421 GAAATGCTCG AGAATA Predicted gene structure (within gDNA segment 23755 to 21201): Exon 1 23145 22803 ( 343 n); cDNA 1 343 ( 343 n); score: 0.988 MATCH C08HBa0235H18.1- SGN-E396750- 0.988 343 0.787 C PGS_C08HBa0235H18.1-_SGN-E396750- (23145 22803) Alignment (genomic DNA sequence = upper lines): CCCACAAGTC TGGAATGCCT CTGAAATTCA TTCGACAAGC GTCGGACTCA AAGAAGCTCG 23086 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCACAAGTC TGGAATGCCT CTGAAATTCA TTCGACAAGC GTCGGACTCA AAGAAGCTCG 60 TTAAGCCTGA CATGACATGA CTTGGCATTG ACTTTTTCGA GATACTATTT CTTAAAAAAT 23026 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAAGCCTGA CATGACATGA CTTGGCATTG ACTTTTTCGA GATACTATTT CTTAAAAAAT 120 TTCTTGCTTC TCTTAAAAAT TTCCCTTTTA TATTTCATCT GTTTTGGCAT AAGATATTTT 22966 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTGCTTC TCTTAAAAAT TTCCCTTTTA TATTTCATCT GTTTTGGCAT AAGATATTTT 180 CTTATCTATC AAGAGTCGAG AAATCGGGAA ATCAACCGAG GACGTCAAGA CAAGGAGCAA 22906 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTATCTATC AAGAGTCGAG AAATCGGGAA ATCAACCGAG GACGTCAAGA CAAGGAGCAA 240 ACAATCGAAG GGATCGACAC AGATCAGTAT GTTTAAAACT GACAATTTTT CTGTGGATGC 22846 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAATCGAAG GGATCGACAC AGATCAGTAT GTTTAAAACT GACAATTTTT CTGTGGATGC 300 AGGTTTATAG CTTCACTTCG AAATCGGCCG AATTCTTCCG ACT 22803 |||||||||| |||||||||| |||||||||| ||||| | ||| AGGTTTATAG CTTCACTTCG AAATCGGCCG AATTCAGGCC ACT 343 hqPGS_C08HBa0235H18.1-_SGN-E396750- (23145 22803) ******************************************************************************** EST sequence 383 -strand 212 n (File: SGN-E396899-) 1 TCAAGACAAG GAGCAAACAA TTGAAGGGAT CGACACAGAT CAGTATGTTT AAAACTGACA 61 ATTTTTCTGT GGATGCAGGT TTATAGCTTC ACTTCGAAAT CGGCCGAATT CAGGCCACTT 121 GTAGTTCGAT AAGCTTGATT TACCGCACGA TTTCAAAGAA TCAAAAGCCA CCTTGACACC 181 GAATAGGGAA GGTATCGAAA TGCTCGAGAA TA Predicted gene structure (within gDNA segment 23531 to 21201): Exon 1 22921 22803 ( 119 n); cDNA 1 119 ( 119 n); score: 0.958 MATCH C08HBa0235H18.1- SGN-E396899- 0.958 119 0.561 C PGS_C08HBa0235H18.1-_SGN-E396899- (22921 22803) Alignment (genomic DNA sequence = upper lines): TCAAGACAAG GAGCAAACAA TCGAAGGGAT CGACACAGAT CAGTATGTTT AAAACTGACA 22862 |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| TCAAGACAAG GAGCAAACAA TTGAAGGGAT CGACACAGAT CAGTATGTTT AAAACTGACA 60 ATTTTTCTGT GGATGCAGGT TTATAGCTTC ACTTCGAAAT CGGCCGAATT CTTCCGACT 22803 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | | ||| ATTTTTCTGT GGATGCAGGT TTATAGCTTC ACTTCGAAAT CGGCCGAATT CAGGCCACT 119 hqPGS_C08HBa0235H18.1-_SGN-E396899- (22921 22803) ******************************************************************************** EST sequence 1033 +strand 735 n (File: SGN-E355122+) 1 AAAAGTGGGA AATGGATGTC ATTGGTCCTA TAGAGCCAAC CGCTTCTAAT GGACACAGAT 61 TCATTTTGGT TGCCACTGAT TATTTTACCA AGTGGGTTGA AGCAGCCTCT TACAAGTCGG 121 TAGCCAAGAA AGTGGTAGCC AATTTTGTCC GCAACAATCT GATATGCAGA TTTGGAGTTC 181 CAGAATCCAT CATTACTGAT AACGGTGCAA ATCTCAACAG TCATCTGATG AAAGAGATAT 241 GTGATCAATT CAAGATTATT CACCGGAGGT CAACTGCTTA TCGCCCTCAA ATGAACGGAG 301 TTGTAGAGGC CGCCAACAAG AATATCAAGA AAATTTTGAG GAAAATGATT GACAAGCAGC 361 GAGGTTGGCA TGAAATATTG TCGTATGCTC TACTAGGTTA TCGAACGACG GTCAGAACAT 421 CGACTGGGGC TACTCCATAC TTGCTAGTAT ACGGAACAGA AGCAGTCGTA CCTATTGAAG 481 TCGACATGCC GTCACTAAGG ATCATCCAAG AAGCTGAATT AAGTAACGCT GAGTGGGTTA 541 GCAAACGGAT TGATCAACTA ACTTTGATTG ATGAGAAGAG GATGGTCGCT GTTTGCCATT 601 GCCAGTTGTA TAGACAAAGA ATGACTCGCG CTTTTCACAA AAGAGTAAGA GCCAGAATTT 661 TGAAGTTGGC CAGTTGGTTC TTAAGCGTAT TTTTCCTCAT CAAGATGAGT ACAAAGGAAA 721 GTTCGCACCA AACTG Predicted gene structure (within gDNA segment 26686 to 23454): Exon 1 24794 24064 ( 731 n); cDNA 6 735 ( 730 n); score: 0.926 MATCH C08HBa0235H18.1- SGN-E355122+ 0.926 731 0.995 C PGS_C08HBa0235H18.1-_SGN-E355122+ (24794 24064) Alignment (genomic DNA sequence = upper lines): TGGGGAATGG ATGTCATCGG CCCTATAGAA CCGGTCGCTT CCAATGGACA CAGATTTATT 24735 |||| ||||| ||||||| || |||||||| || ||||| | |||||||| |||||| ||| TGGGAAATGG ATGTCATTGG TCCTATAGAG CCAACCGCTT CTAATGGACA CAGATTCATT 65 TTGGTTGCCA TCGATTATTT CACCAAATGG GTGGAAGCAG CCTCTTACAA ATCGGTAACC 24675 |||||||||| |||||||| ||||| ||| || ||||||| |||||||||| |||||| || TTGGTTGCCA CTGATTATTT TACCAAGTGG GTTGAAGCAG CCTCTTACAA GTCGGTAGCC 125 AAGAAAGTGG TGGCCGACTT TGTCCGCAAC AATCTGATCT GCCGATTTGG AGTTCCAGAA 24615 |||||||||| | ||| | || |||||||||| |||||||| | || ||||||| |||||||||| AAGAAAGTGG TAGCCAATTT TGTCCGCAAC AATCTGATAT GCAGATTTGG AGTTCCAGAA 185 TCCATCATCA CTGATAACGG TGCAAATCTC AACAGTCATC TGATGAAAGA GATATGTGAA 24555 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| TCCATCATTA CTGATAACGG TGCAAATCTC AACAGTCATC TGATGAAAGA GATATGTGAT 245 CAATTTAAGA TTATTCACCG AAGGTCAACT GCTTATCGCC CTCAAATGAA CGGAGCTGTA 24495 ||||| |||| |||||||||| ||||||||| |||||||||| |||||||||| ||||| |||| CAATTCAAGA TTATTCACCG GAGGTCAACT GCTTATCGCC CTCAAATGAA CGGAGTTGTA 305 GAGGCCGCCA ACAAGAACAT CAAGAAGATT CTGGGGAAAA TGATTGACAA GCAGCGGGGT 24435 |||||||||| ||||||| || |||||| ||| || |||||| |||||||||| |||||| ||| GAGGCCGCCA ACAAGAATAT CAAGAAAATT TTGAGGAAAA TGATTGACAA GCAGCGAGGT 365 TGGCATGAAA TGTTGCCATA TGCTCTACTG GGTTATCGAA CGACGGTCAG AACATCAACT 24375 |||||||||| | ||| | || ||||||||| |||||||||| |||||||||| |||||| ||| TGGCATGAAA TATTGTCGTA TGCTCTACTA GGTTATCGAA CGACGGTCAG AACATCGACT 425 GGGGCTACTC CATACTTGCT AGTATACGGA ACAGAAGCAG TCGTACCTGT CGAAGTCGAG 24315 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||||||| GGGGCTACTC CATACTTGCT AGTATACGGA ACAGAAGCAG TCGTACCTAT TGAAGTCGAC 485 ATACCGTCAC TGAGGATCAT CCAAGAAGCT GAGCTAAGTA ATGCTGAGTG GGTTAGCAAA 24255 || ||||||| | |||||||| |||||||||| || |||||| | |||||||| |||||||||| ATGCCGTCAC TAAGGATCAT CCAAGAAGCT GAATTAAGTA ACGCTGAGTG GGTTAGCAAA 545 CGGATTGATC AACTAGCCTT GATTGATGAA AAGAGGATGG TTGCCGTTTG CCATGGCCAG 24195 |||||||||| ||||| | || ||||||||| |||||||||| | || ||||| |||| ||||| CGGATTGATC AACTAACTTT GATTGATGAG AAGAGGATGG TCGCTGTTTG CCATTGCCAG 605 TTGTATAGAC AAAGAATGAC TCGCGCTTTT CACAAAAGAG TAAGAGCCAG AAATTTTAAA 24135 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| || TTGTATAGAC AAAGAATGAC TCGCGCTTTT CACAAAAGAG TAAGAGCCAG -AATTTTGAA 664 GTTGGTCAGT TGGTTCTTAA GCGTATTTTT CCTCATCAAG ACGAGTACAA AGGAAAGTTC 24075 ||||| |||| |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| GTTGGCCAGT TGGTTCTTAA GCGTATTTTT CCTCATCAAG ATGAGTACAA AGGAAAGTTC 724 GCACCAAACT G 24064 |||||||||| | GCACCAAACT G 735 hqPGS_C08HBa0235H18.1-_SGN-E355122+ (24794 24064) ******************************************************************************** EST sequence 504 +strand 695 n (File: SGN-E350936+) 1 AAAAGTGGGA AATGGATGTC ATTGGTCCTA TAGAGCCAAC CGCTTCTAAT GGACACAGAT 61 TCATTTTGGT TGCCACTGAT TATTTTACCA AGTGGGTTGA AGCAGCCTCT TACAAGTCGG 121 TAGCCAAGAA AGTGGTAGCC AATTTTGTCC GCAACAATCT GATATGCAGA TTTGGAGTTC 181 CAGAATCCAT CATTACTGAT AACGGTGCAA ATCTCAACAG TCATCTGATG AAAGAGATAT 241 GTGATCAATT CAAGATTATT CACCGGAGGT CAACTGCTTA TCGCCCTCAA ATGAACGGAG 301 TTGTAGAGGC CGCCAACAAG AATATCAAGA AAATTTTGAG GAAAATGATT GACAAGCAGC 361 GAGGTTGGCA TGAAATATTG TCGTATGCTC TACTAGGTTA TCGAACGACG GTCAGAACAT 421 CGACTGGGGC TACTCCATAC TTGCTAGTAT ACGGAACAGA AGCAGTCGTA CCTATTGAAG 481 TCGACATGCC GTCACTAAGG ATCATCCAAG AAGCTGAATT AAGTAACGCT GAGTGGGTTA 541 GCAAACGGAT TGATCAACTA ACTTTGATTG ATGAGAAGAG GATGGTCGCT GTTTGCCATT 601 GCCAGTTGTA TAGACAAAGA ATGACTCGCG CTTTTCANCA AAGAGTAAGA GCCAGAATTT 661 TGAAAGTGGC CAGTTGGTTC TTAAGCGTAT TTTTC Predicted gene structure (within gDNA segment 26686 to 23494): Exon 1 24794 24104 ( 691 n); cDNA 6 695 ( 690 n); score: 0.919 MATCH C08HBa0235H18.1- SGN-E350936+ 0.919 691 0.994 C PGS_C08HBa0235H18.1-_SGN-E350936+ (24794 24104) Alignment (genomic DNA sequence = upper lines): TGGGGAATGG ATGTCATCGG CCCTATAGAA CCGGTCGCTT CCAATGGACA CAGATTTATT 24735 |||| ||||| ||||||| || |||||||| || ||||| | |||||||| |||||| ||| TGGGAAATGG ATGTCATTGG TCCTATAGAG CCAACCGCTT CTAATGGACA CAGATTCATT 65 TTGGTTGCCA TCGATTATTT CACCAAATGG GTGGAAGCAG CCTCTTACAA ATCGGTAACC 24675 |||||||||| |||||||| ||||| ||| || ||||||| |||||||||| |||||| || TTGGTTGCCA CTGATTATTT TACCAAGTGG GTTGAAGCAG CCTCTTACAA GTCGGTAGCC 125 AAGAAAGTGG TGGCCGACTT TGTCCGCAAC AATCTGATCT GCCGATTTGG AGTTCCAGAA 24615 |||||||||| | ||| | || |||||||||| |||||||| | || ||||||| |||||||||| AAGAAAGTGG TAGCCAATTT TGTCCGCAAC AATCTGATAT GCAGATTTGG AGTTCCAGAA 185 TCCATCATCA CTGATAACGG TGCAAATCTC AACAGTCATC TGATGAAAGA GATATGTGAA 24555 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| TCCATCATTA CTGATAACGG TGCAAATCTC AACAGTCATC TGATGAAAGA GATATGTGAT 245 CAATTTAAGA TTATTCACCG AAGGTCAACT GCTTATCGCC CTCAAATGAA CGGAGCTGTA 24495 ||||| |||| |||||||||| ||||||||| |||||||||| |||||||||| ||||| |||| CAATTCAAGA TTATTCACCG GAGGTCAACT GCTTATCGCC CTCAAATGAA CGGAGTTGTA 305 GAGGCCGCCA ACAAGAACAT CAAGAAGATT CTGGGGAAAA TGATTGACAA GCAGCGGGGT 24435 |||||||||| ||||||| || |||||| ||| || |||||| |||||||||| |||||| ||| GAGGCCGCCA ACAAGAATAT CAAGAAAATT TTGAGGAAAA TGATTGACAA GCAGCGAGGT 365 TGGCATGAAA TGTTGCCATA TGCTCTACTG GGTTATCGAA CGACGGTCAG AACATCAACT 24375 |||||||||| | ||| | || ||||||||| |||||||||| |||||||||| |||||| ||| TGGCATGAAA TATTGTCGTA TGCTCTACTA GGTTATCGAA CGACGGTCAG AACATCGACT 425 GGGGCTACTC CATACTTGCT AGTATACGGA ACAGAAGCAG TCGTACCTGT CGAAGTCGAG 24315 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||||||| GGGGCTACTC CATACTTGCT AGTATACGGA ACAGAAGCAG TCGTACCTAT TGAAGTCGAC 485 ATACCGTCAC TGAGGATCAT CCAAGAAGCT GAGCTAAGTA ATGCTGAGTG GGTTAGCAAA 24255 || ||||||| | |||||||| |||||||||| || |||||| | |||||||| |||||||||| ATGCCGTCAC TAAGGATCAT CCAAGAAGCT GAATTAAGTA ACGCTGAGTG GGTTAGCAAA 545 CGGATTGATC AACTAGCCTT GATTGATGAA AAGAGGATGG TTGCCGTTTG CCATGGCCAG 24195 |||||||||| ||||| | || ||||||||| |||||||||| | || ||||| |||| ||||| CGGATTGATC AACTAACTTT GATTGATGAG AAGAGGATGG TCGCTGTTTG CCATTGCCAG 605 TTGTATAGAC AAAGAATGAC TCGCGCTTTT CACAAAAGAG TAAGAGCCAG AAATTTTAAA 24135 |||||||||| |||||||||| |||||||||| || |||||| |||||||||| || ||| ||| TTGTATAGAC AAAGAATGAC TCGCGCTTTT CANCAAAGAG TAAGAGCCAG AATTTTGAAA 665 GTTGGTCAGT TGGTTCTTAA GCGTATTTTT C 24104 | ||| |||| |||||||||| |||||||||| | G-TGGCCAGT TGGTTCTTAA GCGTATTTTT C 695 hqPGS_C08HBa0235H18.1-_SGN-E350936+ (24794 24104) ******************************************************************************** EST sequence 793 +strand 694 n (File: SGN-E353644+) 1 AAAAGTGGGA AATGGATGTC ATTGGTCCTA TAGAGCCAAC CGCTTCTAAT GGACACAGAT 61 TCATTTTGGT TGCCACTGAT TATTTTACCA AGTGGGTTGA AGCAGCCTCT TACAAGTCGG 121 TAGCCAAGAA AGTGGTAGCC AATTTTGTCC GCAACAATCT GATATGCAGA TTTGGAGTTC 181 CAGAATCCAT CATTACTGAT AACGGTGCAA ATCTCAACAG TCATCTGATG AAAGAGATAT 241 GTGATCAATT CAAGATTATT CACCGGAGGT CAACTGCTTA TCGCCCTCAA ATGAACGGAG 301 TTGTAGAGGC CGCCAACAAG AATATCAAGA AAATTTTGAG GAAAATGATT GACAAGCAGC 361 GAGGTTGGCA TGAAATATTG TCGTATGCTC TACTAGGTTA TCGAACGACG GTCAGAACAT 421 CGACTGGGGC TACTCCATAC TTGCTAGTAT ACGGAACAGA AGCAGTCGTA CCTATTGAAG 481 TCGACATGCC GTCACTAAGG ATCATCCAAG AAGCTGAATT AAGTAACGCT GAGTGGGTTA 541 GCAAACGGAT TGATCAACTA ACTTTGATTG ATGAGAAGAG GATGGTCGCT GTTTGCCATT 601 GCCAGTTGTA TAGACAAAGA ATGACTCGCG CTTTTCACAA AAGAGTAAGA GCCAGAATTT 661 TGAAGTTGGC CAGTTGGTTC TTAAGCGTAT TTTT Predicted gene structure (within gDNA segment 26686 to 23495): Exon 1 24794 24105 ( 690 n); cDNA 6 694 ( 689 n); score: 0.923 MATCH C08HBa0235H18.1- SGN-E353644+ 0.923 690 0.994 C PGS_C08HBa0235H18.1-_SGN-E353644+ (24794 24105) Alignment (genomic DNA sequence = upper lines): TGGGGAATGG ATGTCATCGG CCCTATAGAA CCGGTCGCTT CCAATGGACA CAGATTTATT 24735 |||| ||||| ||||||| || |||||||| || ||||| | |||||||| |||||| ||| TGGGAAATGG ATGTCATTGG TCCTATAGAG CCAACCGCTT CTAATGGACA CAGATTCATT 65 TTGGTTGCCA TCGATTATTT CACCAAATGG GTGGAAGCAG CCTCTTACAA ATCGGTAACC 24675 |||||||||| |||||||| ||||| ||| || ||||||| |||||||||| |||||| || TTGGTTGCCA CTGATTATTT TACCAAGTGG GTTGAAGCAG CCTCTTACAA GTCGGTAGCC 125 AAGAAAGTGG TGGCCGACTT TGTCCGCAAC AATCTGATCT GCCGATTTGG AGTTCCAGAA 24615 |||||||||| | ||| | || |||||||||| |||||||| | || ||||||| |||||||||| AAGAAAGTGG TAGCCAATTT TGTCCGCAAC AATCTGATAT GCAGATTTGG AGTTCCAGAA 185 TCCATCATCA CTGATAACGG TGCAAATCTC AACAGTCATC TGATGAAAGA GATATGTGAA 24555 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| TCCATCATTA CTGATAACGG TGCAAATCTC AACAGTCATC TGATGAAAGA GATATGTGAT 245 CAATTTAAGA TTATTCACCG AAGGTCAACT GCTTATCGCC CTCAAATGAA CGGAGCTGTA 24495 ||||| |||| |||||||||| ||||||||| |||||||||| |||||||||| ||||| |||| CAATTCAAGA TTATTCACCG GAGGTCAACT GCTTATCGCC CTCAAATGAA CGGAGTTGTA 305 GAGGCCGCCA ACAAGAACAT CAAGAAGATT CTGGGGAAAA TGATTGACAA GCAGCGGGGT 24435 |||||||||| ||||||| || |||||| ||| || |||||| |||||||||| |||||| ||| GAGGCCGCCA ACAAGAATAT CAAGAAAATT TTGAGGAAAA TGATTGACAA GCAGCGAGGT 365 TGGCATGAAA TGTTGCCATA TGCTCTACTG GGTTATCGAA CGACGGTCAG AACATCAACT 24375 |||||||||| | ||| | || ||||||||| |||||||||| |||||||||| |||||| ||| TGGCATGAAA TATTGTCGTA TGCTCTACTA GGTTATCGAA CGACGGTCAG AACATCGACT 425 GGGGCTACTC CATACTTGCT AGTATACGGA ACAGAAGCAG TCGTACCTGT CGAAGTCGAG 24315 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||||||| GGGGCTACTC CATACTTGCT AGTATACGGA ACAGAAGCAG TCGTACCTAT TGAAGTCGAC 485 ATACCGTCAC TGAGGATCAT CCAAGAAGCT GAGCTAAGTA ATGCTGAGTG GGTTAGCAAA 24255 || ||||||| | |||||||| |||||||||| || |||||| | |||||||| |||||||||| ATGCCGTCAC TAAGGATCAT CCAAGAAGCT GAATTAAGTA ACGCTGAGTG GGTTAGCAAA 545 CGGATTGATC AACTAGCCTT GATTGATGAA AAGAGGATGG TTGCCGTTTG CCATGGCCAG 24195 |||||||||| ||||| | || ||||||||| |||||||||| | || ||||| |||| ||||| CGGATTGATC AACTAACTTT GATTGATGAG AAGAGGATGG TCGCTGTTTG CCATTGCCAG 605 TTGTATAGAC AAAGAATGAC TCGCGCTTTT CACAAAAGAG TAAGAGCCAG AAATTTTAAA 24135 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| || TTGTATAGAC AAAGAATGAC TCGCGCTTTT CACAAAAGAG TAAGAGCCAG -AATTTTGAA 664 GTTGGTCAGT TGGTTCTTAA GCGTATTTTT 24105 ||||| |||| |||||||||| |||||||||| GTTGGCCAGT TGGTTCTTAA GCGTATTTTT 694 hqPGS_C08HBa0235H18.1-_SGN-E353644+ (24794 24105) ******************************************************************************** EST sequence 262 +strand 620 n (File: SGN-E352060+) 1 AGATCTTAGT CTCTAATAAA TAACAACTCA TAGACATTCA TGTCGATGAC CATTTTCTAA 61 CTAAGAACAC AAGCTTCGTA TTCGGCCATG TTGTTCGTGC AATTAAATCG AAGCTTAGTC 121 GCCATGGAAT AGTGCTGATC GGATTCTGAC ACTAAGATTG CTTCAATACC TTTACCTTGA 181 TGATTCGCCA CTCCATCAAA GAATAATCTC CAACCTGGAT ACTCTTCAGA AATATCCTCA 241 CCCACAAATG ACACTTCTTC ATCATAAAAG TTAGTCTTAA GAGGTTCATA CTCTTCATCA 301 ACAGGATTTT CGGGAAGATA TAGTTCAGTG GATCCATTCT TAAAATGGGT ATGTTGTATA 361 ATAAGACAAA TAATGTCTCA ACTTCTGGGC AAGCCACGTC AAAGCACAAC ACGTTGTCTC 421 CAACAAAGTG TAACGAGACT CCTATGGAGA AAACTTCTTG ATTATATAAT AGATAGCCCT 481 TTCCTTCTTT CCTGTCTCAT CGTGCTGACC AAGTATGCAT CTGAATGCTC TATCTAAGAC 541 ATACAAGTAC AACAACAAAG GATTCCCTTC TCGCGGACGA ACAAATACCA GTGGATGTGA 601 CAAATAGTTC TTGATAGCAT Predicted gene structure (within gDNA segment 23149 to 29550): Exon 1 25459 25775 ( 317 n); cDNA 1 317 ( 317 n); score: 0.833 Intron 1 25776 25890 ( 115 n); Pd: 0.000 (s: 0.86), Pa: 0.000 (s: 0.76) Exon 2 25891 26192 ( 302 n); cDNA 318 618 ( 301 n); score: 0.808 MATCH C08HBa0235H18.1+ SGN-E352060+ 0.821 619 0.998 C PGS_C08HBa0235H18.1+_SGN-E352060+ (25459 25775,25891 26192) Alignment (genomic DNA sequence = upper lines): AGGTCTGAAT CTCCAATAAC CAGTAACTCG TAAACATTCA TGTCAACGGC CATTTTCAAA 25518 || ||| | | ||| ||||| | ||||| || ||||||| |||| | | | ||||||| || AGATCTTAGT CTCTAATAAA TAACAACTCA TAGACATTCA TGTCGATGAC CATTTTCTAA 60 CCGAGAATGC AAGCTTCATA CTCAGCCATG TTGTTTGTGC AGTTGAACCG TAGCTTAGCC 25578 | |||| | ||||||| || || |||||| ||||| |||| | || || || ||||||| | CTAAGAACAC AAGCTTCGTA TTCGGCCATG TTGTTCGTGC AATTAAATCG AAGCTTAGTC 120 GCCATAGGAT AGTGCTGACC AGATTCTGAT ACCAAGACTG CTCCAACACC TTTACCCTGG 25638 ||||| | || |||||||| | |||||||| || |||| || || ||| ||| |||||| || GCCATGGAAT AGTGCTGATC GGATTCTGAC ACTAAGATTG CTTCAATACC TTTACCTTGA 180 TGATTCACCG CTCCATCAAA GAATAATCTC CAACCTGGAT AAACTTCAGA GATATCTTCA 25698 |||||| || |||||||||| |||||||||| |||||||||| | ||||||| ||||| ||| TGATTCGCCA CTCCATCAAA GAATAATCTC CAACCTGGAT ACTCTTCAGA AATATCCTCA 240 CCCACAAATG ACACTTCTTC ATCGTGAAAA TATGTCTTGA GAGGTTCATA CTCTTCATCA 25758 |||||||||| |||||||||| ||| | ||| | ||||| | |||||||||| |||||||||| CCCACAAATG ACACTTCTTC ATCATAAAAG TTAGTCTTAA GAGGTTCATA CTCTTCATCA 300 ACGGGATTTT CCGCAAGATG ATCAGCCAAA GCTTGTGCTT TTATTGCCTT CTGAGTCACG 25818 || ||||||| | | ||| ACAGGATTTT CGGGAAG... .......... .......... .......... .......... 317 TACACGATGT CAAACTCACT CAACAGCATT TGCCATTTAG CCAGCTTCCC GGTCGGCATC 25878 .......... .......... .......... .......... .......... .......... 317 GCTTTCCGGA AAATATACTT CAATGGATCC ATTCTGGAGA TAAGATATGT AGTATACGAC 25938 ||||| || || ||||||| ||||| | | | | ||||| ||||| | .......... ..ATATAGTT CAGTGGATCC ATTCTTAAAA T-GGGTATGT TGTATAATAA 364 GACAAATAGT GCCTCAGCTT CTGGGCAAGC CATGTCAGAG CACAGCATGT TCTTTCCAGC 25998 |||||||| | | |||| ||| |||||||||| || |||| || |||| || || | | |||| | GACAAATAAT GTCTCAACTT CTGGGCAAGC CACGTCAAAG CACAACACGT TGTCTCCAAC 424 AAAGTGTAAC GAGACTCGTA CGGAGTAAAC TTCTTGCTGA TGTAGTAGAT AGCTTTTTCC 26058 |||||||||| ||||||| || |||| |||| |||||| | | | || ||||| ||| ||||| AAAGTGTAAC GAGACTCCTA TGGAGAAAAC TTCTTGATTA TATAATAGAT AGCCCTTTCC 484 TTCTTCCCTG TCTCGTCGTG TTGACCAAGT ACACATCCAA AGACGTTATC CGAGACAGAC 26118 ||||| |||| |||| ||||| ||||||||| | |||| | | | |||| ||||| || TTCTTTCCTG TCTCATCGTG CTGACCAAGT ATGCATCTGA ATGCTCTATC TAAGACATAC 544 AAATATAGCA ACAAAGGACT CCCTTCTCGC GGAGGAACCA ATACTGGTGG GTTAGACAAG 26178 || || | || |||||||| | |||||||||| ||| |||| | |||| |||| | ||||| AAGTACAACA ACAAAGGATT CCCTTCTCGC GGACGAACAA ATACCAGTGG ATGTGACAAA 604 TAGCTCTTGA TAGC 26192 ||| |||||| |||| TAGTTCTTGA TAGC 618 hqPGS_C08HBa0235H18.1+_SGN-E352060+ (25459 25775,25891 26192) ******************************************************************************** EST sequence 258 -strand 536 n (File: SGN-E243204-) 1 CAGATTTCCC AAGATAACGC CAAACAAACA AATTCCTGTT TGTTCAAAAT ATATATCCGT 61 CCTTATTCGT GGGTTAAGAT ATCCTCAAAC AAAACGACTT GTGTGTTTAT CGGTTTTATG 121 TGCGATATTA AGCATTTTGT ACTCTGGATA TGCACTAACA AATTTGCCTT TGAGTTGTTT 181 TTACCTTTCA GGTACCTTTT TACTGATCTG TGTCAATAAA GCTGGCAGAT CATCCTTACT 241 TCACCAGATC GAAAGGTCCT ACAGATTCCT TCCCTCGATC AAATTCAGAT AAAGGAAAAA 301 CAGTTATGGG AGACAACAAT GACGAAGGGC GTCTTACTGA CGTTGTGGTC GCTCAGCCCA 361 CTGTAGTGGA ACAGAATGAA TTGATCATGC AACTGATGCA ACAGATTGCT GAAATGAAAG 421 TTGAAATGCA ACGGAGACAG GATGCGCCTC CACCTGGATT TGGTACTAAT ATTGCTGATG 481 CAAGACCTCC GGTCTACTTC CCTTCATCAA ACATAGATCC AACTCAGAAC CAGCCT Predicted gene structure (within gDNA segment 32087 to 30343): Exon 1 31477 30943 ( 535 n); cDNA 1 536 ( 536 n); score: 0.964 MATCH C08HBa0235H18.1- SGN-E243204- 0.964 535 0.998 C PGS_C08HBa0235H18.1-_SGN-E243204- (31477 30943) Alignment (genomic DNA sequence = upper lines): CAGATTTCCC AAGATATCTC CAAACAAACA AATTCCTGTT TGTTCAAAAT ATATATCCGT 31418 |||||||||| |||||| | | |||||||||| |||||||||| |||||||||| |||||||||| CAGATTTCCC AAGATAACGC CAAACAAACA AATTCCTGTT TGTTCAAAAT ATATATCCGT 60 CCTTATTCGT GGGTTAAGAT ATCCTCAAAC AAAACGACTT GTGTGCTTAT CTGTTTTATG 31358 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| | |||||||| CCTTATTCGT GGGTTAAGAT ATCCTCAAAC AAAACGACTT GTGTGTTTAT CGGTTTTATG 120 TGCGATATTA TGCATTTTGT ACTCTGGATA TGCACTAACA AATTTGCCTT TGAGTTGTTT 31298 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCGATATTA AGCATTTTGT ACTCTGGATA TGCACTAACA AATTTGCCTT TGAGTTGTTT 180 CTACCTCTCA GGTACC-TTT TACTGATCTG TGTCGATAAA GCTGGCAGAT CATTCTTACT 31239 ||||| ||| |||||| ||| |||||||||| |||| ||||| |||||||||| ||| |||||| TTACCTTTCA GGTACCTTTT TACTGATCTG TGTCAATAAA GCTGGCAGAT CATCCTTACT 240 TCACCAGGTC AAAAGGTCCT ACAGATTCCT TCCCTCGATC AAATTCAGAC AAAGGAAAAA 31179 ||||||| || ||||||||| |||||||||| |||||||||| ||||||||| |||||||||| TCACCAGATC GAAAGGTCCT ACAGATTCCT TCCCTCGATC AAATTCAGAT AAAGGAAAAA 300 TAGTTATGGG AGACAACAAT GACGAAGGGC GTCTTACAGA CGTTGTGGTG GCTCAGCCCA 31119 ||||||||| |||||||||| |||||||||| ||||||| || ||||||||| |||||||||| CAGTTATGGG AGACAACAAT GACGAAGGGC GTCTTACTGA CGTTGTGGTC GCTCAGCCCA 360 CTGTAGTGGA ACAGAACGAA TTGATCATGC AACTGATGCA ACAGATTGCT GAAATGAAAG 31059 |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTAGTGGA ACAGAATGAA TTGATCATGC AACTGATGCA ACAGATTGCT GAAATGAAAG 420 TTGAAATGCA ACGGAGACAG GATGCGCCTC CACCTGGATT TGGTACTAAT ATTGCTGATG 30999 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGAAATGCA ACGGAGACAG GATGCGCCTC CACCTGGATT TGGTACTAAT ATTGCTGATG 480 CAAGACCTCC GGTCTACTTC CTTTCATCAA ACATAGATCC AACTCAGAAC CAGCCT 30943 |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| |||||| CAAGACCTCC GGTCTACTTC CCTTCATCAA ACATAGATCC AACTCAGAAC CAGCCT 536 hqPGS_C08HBa0235H18.1-_SGN-E243204- (31477 30943) ******************************************************************************** EST sequence 2 -strand 386 n (File: SGN-E577849-) 1 AGATTCAGAA GGTTAAGGAA GAAGGACTCA AAGTAGACGC GACCACGGCG ATCTACAAAG 61 CTGCGGTCAC AACATTGGAT GAAGATCTGG CGTCACAGAT AAAGAGAAAG AAGGAGGTTG 121 AGATGGAAAC CGAAAGCCTA AGGAAAAGGT TGAACTTGCT TCGTTTAGAG ATACACGAAG 181 GAAAGGCGAG AGAGGCGAAG ATAGATATCG AGACTGCTGT GTTGTTGGAC AGAAACGCGG 241 CGCTCGACGA GGAATTGGCG ACCCATAGCG ACCCAAAGGG CGGAAAATAC CTCGCCCATG 301 ATCTGGGAGC AGATAACAGT GGCCCCGACC GTGAAGTGAC TGAGGAGGAT GATGAAGAAG 361 AAATCGTCTA CAAGCCTCCA TTTTCG Predicted gene structure (within gDNA segment 32776 to 31181): Exon 1 32166 31781 ( 386 n); cDNA 1 386 ( 386 n); score: 0.969 MATCH C08HBa0235H18.1- SGN-E577849- 0.969 386 1.000 C PGS_C08HBa0235H18.1-_SGN-E577849- (32166 31781) Alignment (genomic DNA sequence = upper lines): AGATTCAGAA GGTTAAGGAA GAAGGACTCA AAGTAGACGC GACCACGGCG ATCTACAAAG 32107 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATTCAGAA GGTTAAGGAA GAAGGACTCA AAGTAGACGC GACCACGGCG ATCTACAAAG 60 CTGCGGTCAC AACATTGGAT GAAGATCTGG CGTCACAGAT AAAGAGAAAG AAGGAGGTTG 32047 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGCGGTCAC AACATTGGAT GAAGATCTGG CGTCACAGAT AAAGAGAAAG AAGGAGGTTG 120 AGATGGAAAC CGAAAGCCTA AGGAAAAGGT TGAACTTGCT TCGTTTGGAG ATACACGAAG 31987 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| AGATGGAAAC CGAAAGCCTA AGGAAAAGGT TGAACTTGCT TCGTTTAGAG ATACACGAAG 180 GAAAGGCGAG AGAGGCGAAG ATAGATATCG AGACTGCTGT GTTGTTGGAC AGAAGCACGG 31927 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| | ||| GAAAGGCGAG AGAGGCGAAG ATAGATATCG AGACTGCTGT GTTGTTGGAC AGAAACGCGG 240 CGCTCGACGA GGAATTGGCA ACCCATAGCG ACCCAAAGGG CGGAAAATAC CTCGCCCGTG 31867 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| ||||||| || CGCTCGACGA GGAATTGGCG ACCCATAGCG ACCCAAAGGG CGGAAAATAC CTCGCCCATG 300 ATCAGGGAAC AGGCAACAGT GGCCCCGGCC ATGAAGTGAT TGAGGAGGAT GATGAAGAAG 31807 ||| |||| | || |||||| ||||||| || |||||||| |||||||||| |||||||||| ATCTGGGAGC AGATAACAGT GGCCCCGACC GTGAAGTGAC TGAGGAGGAT GATGAAGAAG 360 AAATCGTCTA CAAGCCTCCA TTTTCG 31781 |||||||||| |||||||||| |||||| AAATCGTCTA CAAGCCTCCA TTTTCG 386 hqPGS_C08HBa0235H18.1-_SGN-E577849- (32166 31781) ******************************************************************************** EST sequence 1195 +strand 565 n (File: SGN-E329966+) 1 CTTTATGAGA GTTTTAACCA ATATGAATTT ATTTTATTTT TTTCAAATTG AGAAAATTTT 61 TGTTTTATTA TTATGTTATA CCTTGTATTT TTATATTCGC TGATTATTTG TATATTGTAT 121 TTATTCATTA TTTATCTTGT TGTTGGTATA TTATCATTGC ATTCATGGCA TAATATTTTC 181 CGTCAAACGA TAATTATTTC ATTTTCACTA AAGGACGATT ATGCAGGTTC GCAGTCGTTC 241 ATTAACCAAA GATTTTCTCG GGACACCCTG ACGAGTGTAG TTGGCTACTT GATAGTCAAC 301 GATCATTAAC TGTCCCAACC CAAGTAGTCC GCTTGGATCA CCTTTTCCAC TCAAAATAAA 361 ACCCACTCCT AGTCAACTAG TGTAGAGCCG AGCCAAATTC CGAAAATAGC GCCATTTGAA 421 CTAAGATGAC TCAATACCCA AAGCGTGTTG AGCCCATTAG AAGACCACCT TGAGTCTAAA 481 ACAGTCCACT GCCTAAATGG ACGTTCATAC TTATGTGTTT AAATTTGAAG GGTGTATACG 541 TTGTTTGAGA AAATCATTGT CTCAT Predicted gene structure (within gDNA segment 37847 to 31645): Exon 1 36411 36387 ( 25 n); cDNA 101 124 ( 24 n); score: 0.840 Intron 1 36386 36274 ( 113 n); Pd: 0.000 (s: 0), Pa: 0.735 (s: 0) Exon 2 36273 36256 ( 18 n); cDNA 125 142 ( 18 n); score: 0.722 Intron 2 36255 35481 ( 775 n); Pd: 0.000 (s: 0), Pa: 0.998 (s: 0) Exon 3 35480 35476 ( 5 n); cDNA 143 146 ( 4 n); score: 0.600 Intron 3 35475 34738 ( 738 n); Pd: 0.000 (s: 0), Pa: 0.982 (s: 0.66) Exon 4 34737 34373 ( 365 n); cDNA 147 508 ( 362 n); score: 0.792 PPA cDNA 43 32 MATCH C08HBa0235H18.1- SGN-E329966+ 0.792 413 0.731 C PGS_C08HBa0235H18.1-_SGN-E329966+ (36411 36387,36273 36256,35480 35476,34737 34373) Alignment (genomic DNA sequence = upper lines): TGTTTATTCT CTATAATGTA TTTATCTCCC AAACTTGTTA TCTTGTTTAG ATATCATGTT 36352 || ||||| | |||| |||| ||||| TGATTATT-T GTATATTGTA TTTAT..... .......... .......... .......... 124 TGTCAGGCGT CTTGCATGAA AGTTTCGTTT TGTATGCCGT ATGGGTGGTG TGGATTTTGG 36292 .......... .......... .......... .......... .......... .......... 124 AAATCTGTGG TTTGAAAGGC CATCTTTATC TTGGTGGCCA CTTGTGTTAG CTGTCCGAGG 36232 | | |||||| ||| || .......... ........TC ATTATTTATC TTGTTG.... .......... .......... 142 TCACAGCCAT GTAGTAGGTC GATTGAATGG TCCTTTCGCT TAGTGTGTTA GATGTTTGGG 36172 .......... .......... .......... .......... .......... .......... 142 TGATAAGGTG ATCGGGATCC TGTTTTATTT GATGAGGCTG TCCTCTTATG ATTGGTTCAA 36112 .......... .......... .......... .......... .......... .......... 142 GTTTGTTTCA AATGTTTGAA GCGCAAAACG GCTAATTGAT ACTCAATTTA TGATGCATCT 36052 .......... .......... .......... .......... .......... .......... 142 CTATTTGTAT TCGTTATTTA TCCCATGCTA AGTCCTTTCT TTAAATATAA AATTTGGAAA 35992 .......... .......... .......... .......... .......... .......... 142 TTACCAACAA TTTTGTGTGA AGGTTTCACT ACACTTGGGG TTTCGCCGCA CAGTTTATGT 35932 .......... .......... .......... .......... .......... .......... 142 ATCGTTATGT AGTGTCATTT AGGTTGACTG ATTTGCATAT CTCTAAGTAC CATTAAGGTT 35872 .......... .......... .......... .......... .......... .......... 142 GTTGGATGTT GGCTTTGCTT CTCATGAAGA TTTAATTAGT ATTGCATTAT AAAGATATCC 35812 .......... .......... .......... .......... .......... .......... 142 TTGTTATGCT TTAGAACCTT GCTTATTCTA ATTGTAGTTT TAAAAATGCC AATCTTCATT 35752 .......... .......... .......... .......... .......... .......... 142 TTATCGTTTT TTTTGTGACA TGTGAAAACT CCCCGTGAGT CCATTATGGG AATCTTATTA 35692 .......... .......... .......... .......... .......... .......... 142 TCCTCCTCGC ATTTCGAGAG AGTCTTGAAG ACTCTGAACT TTATCGAGTC AATTCATCAA 35632 .......... .......... .......... .......... .......... .......... 142 AACGAGCAAG TGTAGAAAGA CAAGGGTCAT GGAGATTGAA GACGATGGAC TAAAAGACTT 35572 .......... .......... .......... .......... .......... .......... 142 TTCTTTCGTT TTATTTTACT TTGCATATTT TGTAATGGGC CTAAGCCCTC TTGTCGTTTT 35512 .......... .......... .......... .......... .......... .......... 142 TTTGTTTTCT ATATTATGTT TGTATGTTTA GATTAGGACA GGTACAGAAA TGGGCTAAAA 35452 || | .......... .......... .......... .-TTGG.... .......... .......... 146 AACCCAAAGG CAGGTGGGTC CAACATTCGG TCAAGGATAA CAGAACCCGG AGTTGGACCC 35392 .......... .......... .......... .......... .......... .......... 146 AAATCTCTCT CTCTCTATCC TTCTCTTTAC TATTTGCTTA TCTTATTTTG TTTTCAATGC 35332 .......... .......... .......... .......... .......... .......... 146 CGTTAGCTTA GGATTAGGAA ACTCCAAACC CTCATCGAAC GCCTGTTATT TTATCAAACC 35272 .......... .......... .......... .......... .......... .......... 146 TAAAAAATTT TAAAACTAAC TTCTAAATGA TAAATTGTTT CAAATTCGTA AGGCTTGTTT 35212 .......... .......... .......... .......... .......... .......... 146 AGATAAAACC TTGAGTAAGC TTAACTTTGA AATGGTTTCG TAAACTGGCA AGATAAACAA 35152 .......... .......... .......... .......... .......... .......... 146 TAAATATTTC AAAATTGGCT AAGTTTGGCT AAGTAAGTCA TGTTAAAAGT TCAAATAAAT 35092 .......... .......... .......... .......... .......... .......... 146 TTGCAAAGGT TAAAAATAAA AATAATCAAA TAGTTAATCA TTGGAAAACC GTAAGTTAAC 35032 .......... .......... .......... .......... .......... .......... 146 GGAGTGTTTT GGGTGCCTTA CACCTTCCTA AGATACTAAT AGGAATCCCG AACCCTTAAA 34972 .......... .......... .......... .......... .......... .......... 146 ATGTTTCAAA ACAATTTTTT CTGTTTAAGT TGTTTAGAAA CGAAGTTTTC TTGATTTTTC 34912 .......... .......... .......... .......... .......... .......... 146 TTAAAAATTA AGTGGCGACT CCTAAAAGTC TAAAAACAAA CTCTTTTCGA AAATCACCAC 34852 .......... .......... .......... .......... .......... .......... 146 CCTTTTTCGA TAAAACAGAA ATGGCGACTC CACTGGGGAC TTGGAGGATT CTAACCTTAA 34792 .......... .......... .......... .......... .......... .......... 146 GATTAACGTA TTTGATTATT TGTGATTAAC TGTTTAAATG TTTAAATTGT TTAGATTTTT 34732 | || .......... .......... .......... .......... .......... ....TATATT 152 AAACTGCTGC ATACATAGCA TACATA-CTT CCGTCAAACG ACACTTTTTT ACATTTCCAC 34673 | | ||| || ||| ||| || ||| || |||||||||| | | || ||| ||||| ||| -ATC-ATTGC ATTCATGGCA TA-ATATTTT CCGTCAAACG ATAATTATTT -CATTTTCAC 208 TAAAGGACGA TTATGCGGGT TCGCAGTCGT TCGTTAACCA AAAATCTTCT CGGGGCACCC 34613 |||||||||| |||||| ||| |||||||||| || ||||||| || || |||| |||| ||||| TAAAGGACGA TTATGCAGGT TCGCAGTCGT TCATTAACCA AAGATTTTCT CGGGACACCC 268 TGACGAGTGT AGTTGATTAC TTGATAGTCA ACGATCGTTA ATTGTTCCAG CCCAAGTAGT 34553 |||||||||| ||||| ||| |||||||||| |||||| ||| | ||| ||| |||||||||| TGACGAGTGT AGTTGGCTAC TTGATAGTCA ACGATCATTA ACTGTCCCAA CCCAAGTAGT 328 CCGCTTGGGT TACCCATTCC ACTCTAAATA CAACCCACTC TTAGTCAAAC TAGGATAGAG 34493 |||||||| | ||| |||| |||| ||||| ||||||||| ||||| ||| ||| ||||| CCGCTTGGAT CACCTTTTCC ACTCAAAATA AAACCCACTC CTAGTC-AAC TAGTGTAGAG 387 CGAAACCAAA TCCCGAAAAT AGCG-CA-TT GGCCTAAGAT GACCCGACAC CCAAGGAGTG 34435 | | ||||| | |||||||| |||| || || | ||||||| ||| | | || |||| | ||| CCGAGCCAAA TTCCGAAAAT AGCGCCATTT GAACTAAGAT GACTCAATAC CCAAAGCGTG 447 TCGGGCCCAT TAGAAAAGTC CACCTTGAGT C-CAAAGAGC CTGCGGCTCG ATAGGACGCT 34376 | | |||||| ||| ||| | |||||||||| | ||| || | | || | ||||| | TTGAGCCCAT TAG--AAGAC CACCTTGAGT CTAAAACAGT CCACTGCCTA AATGGACGTT 505 CAT 34373 ||| CAT 508 hqPGS_C08HBa0235H18.1-_SGN-E329966+ (36411 36387,36273 36256,35480 35476,34737 34373) ******************************************************************************** EST sequence 120 -strand 743 n (File: SGN-E389635-) 1 GAATTTATTT TATTTTTTTC AAATTGAGAA AATTTTTGTT TTATTATTAT GTTATACCTT 61 GTATTTTTAT ATTCGCTGAT TATTTGTATA TTGTATTTAT TCATTATTTA TCTTGTTGTT 121 GGTATATTAT CATTGCATTC ATGGCATAAT ATTTTCCGTC AAACGATAAT TATTTCATTT 181 TCACTAAAGG ACGATTATGC AGGTTCGCAG TCGTTCATTA ACCAAAGATT TTCTCGGGAC 241 ACCCTGACGA GTGTAGTTGG CTACTTGATA GTCAACGATC ATTAACTGTC CCAACCCAAG 301 TAGTCCGCTT GGATCACCTT TTCCACTCAA AATAAAACCC ACTCCTAGTC AACTAGTGTA 361 GAGCCGAGCC AAATTCCGAA AATAGCGCCA TTTGAACTAA GATGACTCAA TACCCAAGGC 421 GTGTTGAGCC CATTAGAAGA CCACCTTGAG TCTAAAACAG TCCACTGCCT AAATGGACGT 481 TCATACTTAT GTGTTTAAAT TTGAAGGGTG TATACGTTGT TTGAGAAAAT CATTGTCTCA 541 TAGGGTAAAA ATTAAGTTAT AGTTTGCTTA GGTTAAAGAA AGAGCTTCAC CGGCTACTAG 601 CATATTCGAA GATATTGGCA CCCGGGGATG ACAACAAATC AAGAAAGCAG AAGGATCTTT 661 CGTGGAGGCA TAGTTTAGGG TCATATCCCT GTGTGGGACT GATAATTTTG TATACATTTC 721 CCCTATTATG ATCCCCATTC AGT Predicted gene structure (within gDNA segment 37617 to 29635): Exon 1 35480 35471 ( 10 n); cDNA 82 91 ( 10 n); score: 0.600 Intron 1 35470 34767 ( 704 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.54) Exon 2 34766 34280 ( 487 n); cDNA 92 577 ( 486 n); score: 0.742 Intron 2 34279 32261 (2019 n); Pd: 0.000 (s: 0.60), Pa: 0.774 (s: 0) Exon 3 32260 32246 ( 15 n); cDNA 578 591 ( 14 n); score: 0.733 PPA cDNA 19 8 MATCH C08HBa0235H18.1- SGN-E389635- 0.742 512 0.689 C PGS_C08HBa0235H18.1-_SGN-E389635- (35480 35471,34766 34280,32260 32246) Alignment (genomic DNA sequence = upper lines): ATTAGGACAG GTACAGAAAT GGGCTAAAAA ACCCAAAGGC AGGTGGGTCC AACATTCGGT 35421 ||| | | | ATTTGTATAT .......... .......... .......... .......... .......... 91 CAAGGATAAC AGAACCCGGA GTTGGACCCA AATCTCTCTC TCTCTATCCT TCTCTTTACT 35361 .......... .......... .......... .......... .......... .......... 91 ATTTGCTTAT CTTATTTTGT TTTCAATGCC GTTAGCTTAG GATTAGGAAA CTCCAAACCC 35301 .......... .......... .......... .......... .......... .......... 91 TCATCGAACG CCTGTTATTT TATCAAACCT AAAAAATTTT AAAACTAACT TCTAAATGAT 35241 .......... .......... .......... .......... .......... .......... 91 AAATTGTTTC AAATTCGTAA GGCTTGTTTA GATAAAACCT TGAGTAAGCT TAACTTTGAA 35181 .......... .......... .......... .......... .......... .......... 91 ATGGTTTCGT AAACTGGCAA GATAAACAAT AAATATTTCA AAATTGGCTA AGTTTGGCTA 35121 .......... .......... .......... .......... .......... .......... 91 AGTAAGTCAT GTTAAAAGTT CAAATAAATT TGCAAAGGTT AAAAATAAAA ATAATCAAAT 35061 .......... .......... .......... .......... .......... .......... 91 AGTTAATCAT TGGAAAACCG TAAGTTAACG GAGTGTTTTG GGTGCCTTAC ACCTTCCTAA 35001 .......... .......... .......... .......... .......... .......... 91 GATACTAATA GGAATCCCGA ACCCTTAAAA TGTTTCAAAA CAATTTTTTC TGTTTAAGTT 34941 .......... .......... .......... .......... .......... .......... 91 GTTTAGAAAC GAAGTTTTCT TGATTTTTCT TAAAAATTAA GTGGCGACTC CTAAAAGTCT 34881 .......... .......... .......... .......... .......... .......... 91 AAAAACAAAC TCTTTTCGAA AATCACCACC CTTTTTCGAT AAAACAGAAA TGGCGACTCC 34821 .......... .......... .......... .......... .......... .......... 91 ACTGGGGACT TGGAGGATTC TAACCTTAAG ATTAACGTAT TTGATTATTT GTGATTAACT 34761 | | | .......... .......... .......... .......... .......... ....TGTATT 97 GTTTAAATGT TTAAATTGTT -TAGATTTTT AAACTGCTGC ATACATAGCA TACATA-CTT 34703 || | | | ||| ||||| | | | | | | | ||| || ||| ||| || ||| || TATTCATTAT TTATCTTGTT GTTGGTATAT TATC-ATTGC ATTCATGGCA TA-ATATTTT 155 CCGTCAAACG ACACTTTTTT ACATTTCCAC TAAAGGACGA TTATGCGGGT TCGCAGTCGT 34643 |||||||||| | | || ||| ||||| ||| |||||||||| |||||| ||| |||||||||| CCGTCAAACG ATAATTATTT -CATTTTCAC TAAAGGACGA TTATGCAGGT TCGCAGTCGT 214 TCGTTAACCA AAAATCTTCT CGGGGCACCC TGACGAGTGT AGTTGATTAC TTGATAGTCA 34583 || ||||||| || || |||| |||| ||||| |||||||||| ||||| ||| |||||||||| TCATTAACCA AAGATTTTCT CGGGACACCC TGACGAGTGT AGTTGGCTAC TTGATAGTCA 274 ACGATCGTTA ATTGTTCCAG CCCAAGTAGT CCGCTTGGGT TACCCATTCC ACTCTAAATA 34523 |||||| ||| | ||| ||| |||||||||| |||||||| | ||| |||| |||| ||||| ACGATCATTA ACTGTCCCAA CCCAAGTAGT CCGCTTGGAT CACCTTTTCC ACTCAAAATA 334 CAACCCACTC TTAGTCAAAC TAGGATAGAG CGAAACCAAA TCCCGAAAAT AGCG-CA-TT 34465 ||||||||| ||||| ||| ||| ||||| | | ||||| | |||||||| |||| || || AAACCCACTC CTAGTC-AAC TAGTGTAGAG CCGAGCCAAA TTCCGAAAAT AGCGCCATTT 393 GGCCTAAGAT GACCCGACAC CCAAGGAGTG TCGGGCCCAT TAGAAAAGTC CACCTTGAGT 34405 | ||||||| ||| | | || |||||| ||| | | |||||| ||| ||| | |||||||||| GAACTAAGAT GACTCAATAC CCAAGGCGTG TTGAGCCCAT TAG--AAGAC CACCTTGAGT 451 C-CAAAGAGC CTGCGGCTCG ATAGGACGCT CATGTTTGT- TGTTTAAATT TGAAGGATGT 34347 | ||| || | | || | ||||| | ||| || | |||||||||| |||||| ||| CTAAAACAGT CCACTGCCTA AATGGACGTT CATACTTATG TGTTTAAATT TGAAGGGTGT 511 ATTGCGTGTT T-AACGAGTT GTTGTATCGG GGGGATTGAA AATTAACTAG TTGTATGTTT 34288 || |||| | | | | |||| || ||| | || |||||| | | || || || ATACGTTGTT TGAGAAAATC ATTGTCTCAT AGGG--TAAA AATTAAGTTA TAGTTTGCTT 569 TTGTAGATGT CAAGTCAGTT CCTTCACTTC AAAATGGTCA CCCAGGCACC CGACATTCTT 34228 || | AGGTTAAA.. .......... .......... .......... .......... .......... 577 CGAGTATGGT GGGAAAATCT TAAGGAGTGT CAGAAGAGAG AGATCTCGAT TTACTTGGGT 34168 .......... .......... .......... .......... .......... .......... 577 CACCTACCTT CGATAATGGA CTTCAAGGTA TGGCCCACGT TTATCGAAGT CATCACCCGA 34108 .......... .......... .......... .......... .......... .......... 577 TTCTGGGACG ATAAGAAGAT GGTCTTTCGA TTTGGAGATG TCGAAATAAA ACCCACATTA 34048 .......... .......... .......... .......... .......... .......... 577 GAAGAGATCA AAGATTGCCT TGACTCGATT GGGACGTGTG GCAAAAGGAA AAAGCGTCCC 33988 .......... .......... .......... .......... .......... .......... 577 GATCATCACA TTCTCCTGCC AGATAGGCCA ACCGAGACTG AGCTAAGAGA CATATTATCC 33928 .......... .......... .......... .......... .......... .......... 577 CTAGTGAATG CGAATTGGCT AGAGACTCAC AACATTCCAC TGATGAGGTT TTTCGAGAGG 33868 .......... .......... .......... .......... .......... .......... 577 TGGGGGCACG ACAATTATTT TAGATTGTTC CCGGACGAAT TCCATGATCA CAGTACTTGG 33808 .......... .......... .......... .......... .......... .......... 577 AGGCAAACTC AAGCTATCGC TTTCTCCGCA TGCCTCTTGG GAACTATGGT GTTCCCTAAA 33748 .......... .......... .......... .......... .......... .......... 577 GACGAAGGAA AAGAGATCGA CACCCGGGTA ATAATGGTAG TGAATGCCAT GTTCAGAGGA 33688 .......... .......... .......... .......... .......... .......... 577 GTCGGTAGAA AATCTGAAGA AAAGAAATAT TGCTGTTTGG CCCCAGTCAT CCTGTCCGAC 33628 .......... .......... .......... .......... .......... .......... 577 ATTTACCGAT CTTTGAGCCT GTGCAAGAAT GGTTTTCCGT TTTTCCAAGG TTGCAACATC 33568 .......... .......... .......... .......... .......... .......... 577 TTACTTCAAT GGTGGTTGAC GGAGCATCTA TGCAAAAGAG ACAACCCCCA GCTACATGGT 33508 .......... .......... .......... .......... .......... .......... 577 TTGGCCGAAC CAAGTCAAAC AAGTCCTCTC AATAATTACG AGTTCTACTT GAGTATCCGT 33448 .......... .......... .......... .......... .......... .......... 577 AAATTTCCAA TTCACACCAC CAGGGATGCG TGGGCAAAGG TGTTTTACAA TTTGAAAGAA 33388 .......... .......... .......... .......... .......... .......... 577 GGAGACATAC AATGGGTATT ACCGAGCTTC AGGTCTCAGA TGATAGCAGC CCAAGGGGCC 33328 .......... .......... .......... .......... .......... .......... 577 AAATTGCCAT TTTTAGTCCT TCCCGGCATC AGAGGATTGC GTCCTTACAA CCCGACACGA 33268 .......... .......... .......... .......... .......... .......... 577 GTAATGCGGC AATTTGGGAA AGTCCAAATC ATACCCGCCC AAGGAGATGC CAGCTCTTTC 33208 .......... .......... .......... .......... .......... .......... 577 ATTGTTGATT ACAACGGGAA GGACAAAATA CCTTTCGCTA AAATTATCCT CCAGGAATGG 33148 .......... .......... .......... .......... .......... .......... 577 GCCGGACGTG TCAACATGAA GTGGGAGGTC ACCGAAGATA GGTATGGAGC TGGGTATGTC 33088 .......... .......... .......... .......... .......... .......... 577 GACGAATATA AGACATGGTT GCATAATAAT TTGCATGGTG TAGTGGATCC GACACCACGC 33028 .......... .......... .......... .......... .......... .......... 577 ACAAGTCGGA AAATCGAAGA CGTGGAGACA AGGCTTCAGA TTCACGCGTA CCATTTTCAG 32968 .......... .......... .......... .......... .......... .......... 577 CAAGAGTGGG ACCGGAGGGA GCAGGAATTC TATAAGAAAG AACAGGAATT TCAACAAAGG 32908 .......... .......... .......... .......... .......... .......... 577 GAGCAAGCGT ACCAACTCCG GGAATTAGAA AATCAGAGAG TTTTAGCCGT AATGTCACAA 32848 .......... .......... .......... .......... .......... .......... 577 GAATTAGCTG ACACAAGGAC TTGTCTAATG CGTTTGGACA CTATTTTGGA CGAGCAGATG 32788 .......... .......... .......... .......... .......... .......... 577 AACACCTTAC AAGCCGTACC AACATCTTCC AAAGCTGCGT TCGCGGAGCC ATACGTGTTC 32728 .......... .......... .......... .......... .......... .......... 577 ACCAGCAAAT GCATTATCCG AGAAGAAGTG GAGAAGGCCA GAAGAGGAGC TGGATCATCG 32668 .......... .......... .......... .......... .......... .......... 577 ACCTTTTAAC TCCCCTGCGT GGGATTGATT TTATATGTGT ATTTGCACTA CATCCCCTTC 32608 .......... .......... .......... .......... .......... .......... 577 CCAAGATATA TCCCGTTTAA TTTTGATTGT GTAATGAACG CTATGACATC TAGTGAAATT 32548 .......... .......... .......... .......... .......... .......... 577 TGTTTCGGGG ATACAATTAC TTATTTAAAT GGCGCAATAC ATCCTTCAGA TCGCTAGGCC 32488 .......... .......... .......... .......... .......... .......... 577 TACCCTTGGC ACAAAAGGGT CACATGCATG TTTAGGACAC GATATATTTG TTTAAATGTT 32428 .......... .......... .......... .......... .......... .......... 577 TATATGTTAT GTTGCTTTGA TTGAGGATAT CGTAAACCCA CTCCTAGCCA AAATTCAAAA 32368 .......... .......... .......... .......... .......... .......... 577 GAGTATACAG AAGCCAACAT TACAAATGTC CGACCAAAAT TCCCGAGTCC CAAGTTTCTC 32308 .......... .......... .......... .......... .......... .......... 577 ACACAAAATC CATACCATAA ATCCTAAATA CCGCTCTATC ATCTCAGGAA AGTCGAATCA 32248 ||| || | ||| .......... .......... .......... .......... .......GAA AG-AGCTTCA 589 CC 32246 || CC 591 hqPGS_C08HBa0235H18.1-_SGN-E389635- (34766 34280) ******************************************************************************** EST sequence 606 +strand 712 n (File: SGN-E389893+) 1 GTCTTATTTT ATTTTTTTCA AATTGAGAAA ATTTTTGTTT TATTATTATG TTATACCTTG 61 TATTTTTATA TTCGCTGATT ATTTGTATAT TGTATTTATT CATTATTTAT CTTGTTGTTG 121 GTATATTATC ATTGCATTCA TGGCATAATA TTTTCCGTCA AACGATAATT ATTTCATTTT 181 CACTAAAGGA CGATTATGCA GGTTCGCAGT CGTTCATTAA CCAAAGATTT TCTCGGGACA 241 CCCTGACGAG TGTAGTTGGC TACTTGATAG TCAACGATCA TTAACTGTCC CAACCCAAGT 301 AGTCCGCTTG GATCACCTTT TCCACTCAAA ATAAAACCCA CTCCTAGTCA ACTAGTGTAG 361 AGCCGAGCCA AATTCCGAAA ATAGCGCCAT TTGAACTAAG ATGACTCAAT ACCCAAGGCG 421 TGTTGAGCCC ATTAGAAGAC CACCTTGAGT CTAAAACAGT CCACTGCCTA AATGGACGTT 481 CATACTTATG TGTTTAAATT TGAAGGGTGT ATACGTTGTT TGAGAAAATC ATTGTCTCAT 541 AGGGTAAAAA TTAAGTTATA GTTTGCTTAG GTTAAAGAAA GAGCTTCACC GGCTACTAGC 601 ATATTCGAAG ATATTGGCAC CCGGGGATGA CAACAAATCA AGAAAGCAGA AGGATCTTTC 661 GTGGAGGCAT AGTTTAGGGT CATATCCCTG TGTGGGACTG ATTATTTTGT AT Predicted gene structure (within gDNA segment 37597 to 29325): Exon 1 35480 35471 ( 10 n); cDNA 81 90 ( 10 n); score: 0.600 Intron 1 35470 34767 ( 704 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.54) Exon 2 34766 34280 ( 487 n); cDNA 91 576 ( 486 n); score: 0.742 Intron 2 34279 32261 (2019 n); Pd: 0.000 (s: 0.60), Pa: 0.774 (s: 0) Exon 3 32260 32246 ( 15 n); cDNA 577 590 ( 14 n); score: 0.733 PPA cDNA 18 7 MATCH C08HBa0235H18.1- SGN-E389893+ 0.742 512 0.719 C PGS_C08HBa0235H18.1-_SGN-E389893+ (35480 35471,34766 34280,32260 32246) Alignment (genomic DNA sequence = upper lines): ATTAGGACAG GTACAGAAAT GGGCTAAAAA ACCCAAAGGC AGGTGGGTCC AACATTCGGT 35421 ||| | | | ATTTGTATAT .......... .......... .......... .......... .......... 90 CAAGGATAAC AGAACCCGGA GTTGGACCCA AATCTCTCTC TCTCTATCCT TCTCTTTACT 35361 .......... .......... .......... .......... .......... .......... 90 ATTTGCTTAT CTTATTTTGT TTTCAATGCC GTTAGCTTAG GATTAGGAAA CTCCAAACCC 35301 .......... .......... .......... .......... .......... .......... 90 TCATCGAACG CCTGTTATTT TATCAAACCT AAAAAATTTT AAAACTAACT TCTAAATGAT 35241 .......... .......... .......... .......... .......... .......... 90 AAATTGTTTC AAATTCGTAA GGCTTGTTTA GATAAAACCT TGAGTAAGCT TAACTTTGAA 35181 .......... .......... .......... .......... .......... .......... 90 ATGGTTTCGT AAACTGGCAA GATAAACAAT AAATATTTCA AAATTGGCTA AGTTTGGCTA 35121 .......... .......... .......... .......... .......... .......... 90 AGTAAGTCAT GTTAAAAGTT CAAATAAATT TGCAAAGGTT AAAAATAAAA ATAATCAAAT 35061 .......... .......... .......... .......... .......... .......... 90 AGTTAATCAT TGGAAAACCG TAAGTTAACG GAGTGTTTTG GGTGCCTTAC ACCTTCCTAA 35001 .......... .......... .......... .......... .......... .......... 90 GATACTAATA GGAATCCCGA ACCCTTAAAA TGTTTCAAAA CAATTTTTTC TGTTTAAGTT 34941 .......... .......... .......... .......... .......... .......... 90 GTTTAGAAAC GAAGTTTTCT TGATTTTTCT TAAAAATTAA GTGGCGACTC CTAAAAGTCT 34881 .......... .......... .......... .......... .......... .......... 90 AAAAACAAAC TCTTTTCGAA AATCACCACC CTTTTTCGAT AAAACAGAAA TGGCGACTCC 34821 .......... .......... .......... .......... .......... .......... 90 ACTGGGGACT TGGAGGATTC TAACCTTAAG ATTAACGTAT TTGATTATTT GTGATTAACT 34761 | | | .......... .......... .......... .......... .......... ....TGTATT 96 GTTTAAATGT TTAAATTGTT -TAGATTTTT AAACTGCTGC ATACATAGCA TACATA-CTT 34703 || | | | ||| ||||| | | | | | | | ||| || ||| ||| || ||| || TATTCATTAT TTATCTTGTT GTTGGTATAT TATC-ATTGC ATTCATGGCA TA-ATATTTT 154 CCGTCAAACG ACACTTTTTT ACATTTCCAC TAAAGGACGA TTATGCGGGT TCGCAGTCGT 34643 |||||||||| | | || ||| ||||| ||| |||||||||| |||||| ||| |||||||||| CCGTCAAACG ATAATTATTT -CATTTTCAC TAAAGGACGA TTATGCAGGT TCGCAGTCGT 213 TCGTTAACCA AAAATCTTCT CGGGGCACCC TGACGAGTGT AGTTGATTAC TTGATAGTCA 34583 || ||||||| || || |||| |||| ||||| |||||||||| ||||| ||| |||||||||| TCATTAACCA AAGATTTTCT CGGGACACCC TGACGAGTGT AGTTGGCTAC TTGATAGTCA 273 ACGATCGTTA ATTGTTCCAG CCCAAGTAGT CCGCTTGGGT TACCCATTCC ACTCTAAATA 34523 |||||| ||| | ||| ||| |||||||||| |||||||| | ||| |||| |||| ||||| ACGATCATTA ACTGTCCCAA CCCAAGTAGT CCGCTTGGAT CACCTTTTCC ACTCAAAATA 333 CAACCCACTC TTAGTCAAAC TAGGATAGAG CGAAACCAAA TCCCGAAAAT AGCG-CA-TT 34465 ||||||||| ||||| ||| ||| ||||| | | ||||| | |||||||| |||| || || AAACCCACTC CTAGTC-AAC TAGTGTAGAG CCGAGCCAAA TTCCGAAAAT AGCGCCATTT 392 GGCCTAAGAT GACCCGACAC CCAAGGAGTG TCGGGCCCAT TAGAAAAGTC CACCTTGAGT 34405 | ||||||| ||| | | || |||||| ||| | | |||||| ||| ||| | |||||||||| GAACTAAGAT GACTCAATAC CCAAGGCGTG TTGAGCCCAT TAG--AAGAC CACCTTGAGT 450 C-CAAAGAGC CTGCGGCTCG ATAGGACGCT CATGTTTGT- TGTTTAAATT TGAAGGATGT 34347 | ||| || | | || | ||||| | ||| || | |||||||||| |||||| ||| CTAAAACAGT CCACTGCCTA AATGGACGTT CATACTTATG TGTTTAAATT TGAAGGGTGT 510 ATTGCGTGTT T-AACGAGTT GTTGTATCGG GGGGATTGAA AATTAACTAG TTGTATGTTT 34288 || |||| | | | | |||| || ||| | || |||||| | | || || || ATACGTTGTT TGAGAAAATC ATTGTCTCAT AGGG--TAAA AATTAAGTTA TAGTTTGCTT 568 TTGTAGATGT CAAGTCAGTT CCTTCACTTC AAAATGGTCA CCCAGGCACC CGACATTCTT 34228 || | AGGTTAAA.. .......... .......... .......... .......... .......... 576 CGAGTATGGT GGGAAAATCT TAAGGAGTGT CAGAAGAGAG AGATCTCGAT TTACTTGGGT 34168 .......... .......... .......... .......... .......... .......... 576 CACCTACCTT CGATAATGGA CTTCAAGGTA TGGCCCACGT TTATCGAAGT CATCACCCGA 34108 .......... .......... .......... .......... .......... .......... 576 TTCTGGGACG ATAAGAAGAT GGTCTTTCGA TTTGGAGATG TCGAAATAAA ACCCACATTA 34048 .......... .......... .......... .......... .......... .......... 576 GAAGAGATCA AAGATTGCCT TGACTCGATT GGGACGTGTG GCAAAAGGAA AAAGCGTCCC 33988 .......... .......... .......... .......... .......... .......... 576 GATCATCACA TTCTCCTGCC AGATAGGCCA ACCGAGACTG AGCTAAGAGA CATATTATCC 33928 .......... .......... .......... .......... .......... .......... 576 CTAGTGAATG CGAATTGGCT AGAGACTCAC AACATTCCAC TGATGAGGTT TTTCGAGAGG 33868 .......... .......... .......... .......... .......... .......... 576 TGGGGGCACG ACAATTATTT TAGATTGTTC CCGGACGAAT TCCATGATCA CAGTACTTGG 33808 .......... .......... .......... .......... .......... .......... 576 AGGCAAACTC AAGCTATCGC TTTCTCCGCA TGCCTCTTGG GAACTATGGT GTTCCCTAAA 33748 .......... .......... .......... .......... .......... .......... 576 GACGAAGGAA AAGAGATCGA CACCCGGGTA ATAATGGTAG TGAATGCCAT GTTCAGAGGA 33688 .......... .......... .......... .......... .......... .......... 576 GTCGGTAGAA AATCTGAAGA AAAGAAATAT TGCTGTTTGG CCCCAGTCAT CCTGTCCGAC 33628 .......... .......... .......... .......... .......... .......... 576 ATTTACCGAT CTTTGAGCCT GTGCAAGAAT GGTTTTCCGT TTTTCCAAGG TTGCAACATC 33568 .......... .......... .......... .......... .......... .......... 576 TTACTTCAAT GGTGGTTGAC GGAGCATCTA TGCAAAAGAG ACAACCCCCA GCTACATGGT 33508 .......... .......... .......... .......... .......... .......... 576 TTGGCCGAAC CAAGTCAAAC AAGTCCTCTC AATAATTACG AGTTCTACTT GAGTATCCGT 33448 .......... .......... .......... .......... .......... .......... 576 AAATTTCCAA TTCACACCAC CAGGGATGCG TGGGCAAAGG TGTTTTACAA TTTGAAAGAA 33388 .......... .......... .......... .......... .......... .......... 576 GGAGACATAC AATGGGTATT ACCGAGCTTC AGGTCTCAGA TGATAGCAGC CCAAGGGGCC 33328 .......... .......... .......... .......... .......... .......... 576 AAATTGCCAT TTTTAGTCCT TCCCGGCATC AGAGGATTGC GTCCTTACAA CCCGACACGA 33268 .......... .......... .......... .......... .......... .......... 576 GTAATGCGGC AATTTGGGAA AGTCCAAATC ATACCCGCCC AAGGAGATGC CAGCTCTTTC 33208 .......... .......... .......... .......... .......... .......... 576 ATTGTTGATT ACAACGGGAA GGACAAAATA CCTTTCGCTA AAATTATCCT CCAGGAATGG 33148 .......... .......... .......... .......... .......... .......... 576 GCCGGACGTG TCAACATGAA GTGGGAGGTC ACCGAAGATA GGTATGGAGC TGGGTATGTC 33088 .......... .......... .......... .......... .......... .......... 576 GACGAATATA AGACATGGTT GCATAATAAT TTGCATGGTG TAGTGGATCC GACACCACGC 33028 .......... .......... .......... .......... .......... .......... 576 ACAAGTCGGA AAATCGAAGA CGTGGAGACA AGGCTTCAGA TTCACGCGTA CCATTTTCAG 32968 .......... .......... .......... .......... .......... .......... 576 CAAGAGTGGG ACCGGAGGGA GCAGGAATTC TATAAGAAAG AACAGGAATT TCAACAAAGG 32908 .......... .......... .......... .......... .......... .......... 576 GAGCAAGCGT ACCAACTCCG GGAATTAGAA AATCAGAGAG TTTTAGCCGT AATGTCACAA 32848 .......... .......... .......... .......... .......... .......... 576 GAATTAGCTG ACACAAGGAC TTGTCTAATG CGTTTGGACA CTATTTTGGA CGAGCAGATG 32788 .......... .......... .......... .......... .......... .......... 576 AACACCTTAC AAGCCGTACC AACATCTTCC AAAGCTGCGT TCGCGGAGCC ATACGTGTTC 32728 .......... .......... .......... .......... .......... .......... 576 ACCAGCAAAT GCATTATCCG AGAAGAAGTG GAGAAGGCCA GAAGAGGAGC TGGATCATCG 32668 .......... .......... .......... .......... .......... .......... 576 ACCTTTTAAC TCCCCTGCGT GGGATTGATT TTATATGTGT ATTTGCACTA CATCCCCTTC 32608 .......... .......... .......... .......... .......... .......... 576 CCAAGATATA TCCCGTTTAA TTTTGATTGT GTAATGAACG CTATGACATC TAGTGAAATT 32548 .......... .......... .......... .......... .......... .......... 576 TGTTTCGGGG ATACAATTAC TTATTTAAAT GGCGCAATAC ATCCTTCAGA TCGCTAGGCC 32488 .......... .......... .......... .......... .......... .......... 576 TACCCTTGGC ACAAAAGGGT CACATGCATG TTTAGGACAC GATATATTTG TTTAAATGTT 32428 .......... .......... .......... .......... .......... .......... 576 TATATGTTAT GTTGCTTTGA TTGAGGATAT CGTAAACCCA CTCCTAGCCA AAATTCAAAA 32368 .......... .......... .......... .......... .......... .......... 576 GAGTATACAG AAGCCAACAT TACAAATGTC CGACCAAAAT TCCCGAGTCC CAAGTTTCTC 32308 .......... .......... .......... .......... .......... .......... 576 ACACAAAATC CATACCATAA ATCCTAAATA CCGCTCTATC ATCTCAGGAA AGTCGAATCA 32248 ||| || | ||| .......... .......... .......... .......... .......GAA AG-AGCTTCA 588 CC 32246 || CC 590 hqPGS_C08HBa0235H18.1-_SGN-E389893+ (34766 34280) ******************************************************************************** EST sequence 632 +strand 734 n (File: SGN-E549958+) 1 GACATTTATT TTATTTTTTT CAAATTGAGA AAATTTTTGT TTTATTATTA TGTTATACCT 61 TGTATTTTTA TATTCGCTGA TTATTTGTAT ATTGTATTTA TTCATTATTT ATCTTGTTGT 121 TGGTATATTA TCATTGCATT CATGGCATAA TATTTTCCGT CAAACGATAA TTATTTCATT 181 TTCACTAAAG GACGATTATG CAGGTTCGCA GTCGTTCATT AACCAAAGAT TTTCTCGGGA 241 CACCCTGACG AGTGTAGTTG GCTACTTGAT AGTCAACGAT CATTAACTGT CCCAACCCAA 301 GTAGTCCGCT TGGATCACCT TTTCCACTCA AAATAAAACC CACTCCTAGT CAACTAGTGT 361 AGAGCCGAGC CAAATTCCGA AAATAGCGCC ATTTGAACTA AGATGACTCA ATACCCAAGG 421 CGTGTTGAGC CCATTAGAAG ACCACCTTGA GTCTAAAACA GTCCACTGCC TAAATGGACG 481 TTCATACTTA TGTGTTTAAA TTTGAAGGGT GTATACGTTG TTTGAGAAAA TCATTGTCTC 541 ATAGGGTAAA AATTAAGTTA TAGTTTGCTT AGGTTAAAGA AAGAGCTTCA CCGGCTACTA 601 GCATATTCGA AGATATTGGC ACCCGGGGAT GACAACAAAT CAAGAAAGCA GAAGGATCTT 661 TCGTGGAGGC ATAGTTTAGG GTCATATCCC TGTGTGGGAC TGATTATTTT GTATACATTT 721 CCCCTATTAT GTAT Predicted gene structure (within gDNA segment 37617 to 29725): Exon 1 35480 35471 ( 10 n); cDNA 83 92 ( 10 n); score: 0.600 Intron 1 35470 34767 ( 704 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.54) Exon 2 34766 34280 ( 487 n); cDNA 93 578 ( 486 n); score: 0.742 Intron 2 34279 32261 (2019 n); Pd: 0.000 (s: 0.60), Pa: 0.774 (s: 0) Exon 3 32260 32246 ( 15 n); cDNA 579 592 ( 14 n); score: 0.733 PPA cDNA 20 9 MATCH C08HBa0235H18.1- SGN-E549958+ 0.742 512 0.698 C PGS_C08HBa0235H18.1-_SGN-E549958+ (35480 35471,34766 34280,32260 32246) Alignment (genomic DNA sequence = upper lines): ATTAGGACAG GTACAGAAAT GGGCTAAAAA ACCCAAAGGC AGGTGGGTCC AACATTCGGT 35421 ||| | | | ATTTGTATAT .......... .......... .......... .......... .......... 92 CAAGGATAAC AGAACCCGGA GTTGGACCCA AATCTCTCTC TCTCTATCCT TCTCTTTACT 35361 .......... .......... .......... .......... .......... .......... 92 ATTTGCTTAT CTTATTTTGT TTTCAATGCC GTTAGCTTAG GATTAGGAAA CTCCAAACCC 35301 .......... .......... .......... .......... .......... .......... 92 TCATCGAACG CCTGTTATTT TATCAAACCT AAAAAATTTT AAAACTAACT TCTAAATGAT 35241 .......... .......... .......... .......... .......... .......... 92 AAATTGTTTC AAATTCGTAA GGCTTGTTTA GATAAAACCT TGAGTAAGCT TAACTTTGAA 35181 .......... .......... .......... .......... .......... .......... 92 ATGGTTTCGT AAACTGGCAA GATAAACAAT AAATATTTCA AAATTGGCTA AGTTTGGCTA 35121 .......... .......... .......... .......... .......... .......... 92 AGTAAGTCAT GTTAAAAGTT CAAATAAATT TGCAAAGGTT AAAAATAAAA ATAATCAAAT 35061 .......... .......... .......... .......... .......... .......... 92 AGTTAATCAT TGGAAAACCG TAAGTTAACG GAGTGTTTTG GGTGCCTTAC ACCTTCCTAA 35001 .......... .......... .......... .......... .......... .......... 92 GATACTAATA GGAATCCCGA ACCCTTAAAA TGTTTCAAAA CAATTTTTTC TGTTTAAGTT 34941 .......... .......... .......... .......... .......... .......... 92 GTTTAGAAAC GAAGTTTTCT TGATTTTTCT TAAAAATTAA GTGGCGACTC CTAAAAGTCT 34881 .......... .......... .......... .......... .......... .......... 92 AAAAACAAAC TCTTTTCGAA AATCACCACC CTTTTTCGAT AAAACAGAAA TGGCGACTCC 34821 .......... .......... .......... .......... .......... .......... 92 ACTGGGGACT TGGAGGATTC TAACCTTAAG ATTAACGTAT TTGATTATTT GTGATTAACT 34761 | | | .......... .......... .......... .......... .......... ....TGTATT 98 GTTTAAATGT TTAAATTGTT -TAGATTTTT AAACTGCTGC ATACATAGCA TACATA-CTT 34703 || | | | ||| ||||| | | | | | | | ||| || ||| ||| || ||| || TATTCATTAT TTATCTTGTT GTTGGTATAT TATC-ATTGC ATTCATGGCA TA-ATATTTT 156 CCGTCAAACG ACACTTTTTT ACATTTCCAC TAAAGGACGA TTATGCGGGT TCGCAGTCGT 34643 |||||||||| | | || ||| ||||| ||| |||||||||| |||||| ||| |||||||||| CCGTCAAACG ATAATTATTT -CATTTTCAC TAAAGGACGA TTATGCAGGT TCGCAGTCGT 215 TCGTTAACCA AAAATCTTCT CGGGGCACCC TGACGAGTGT AGTTGATTAC TTGATAGTCA 34583 || ||||||| || || |||| |||| ||||| |||||||||| ||||| ||| |||||||||| TCATTAACCA AAGATTTTCT CGGGACACCC TGACGAGTGT AGTTGGCTAC TTGATAGTCA 275 ACGATCGTTA ATTGTTCCAG CCCAAGTAGT CCGCTTGGGT TACCCATTCC ACTCTAAATA 34523 |||||| ||| | ||| ||| |||||||||| |||||||| | ||| |||| |||| ||||| ACGATCATTA ACTGTCCCAA CCCAAGTAGT CCGCTTGGAT CACCTTTTCC ACTCAAAATA 335 CAACCCACTC TTAGTCAAAC TAGGATAGAG CGAAACCAAA TCCCGAAAAT AGCG-CA-TT 34465 ||||||||| ||||| ||| ||| ||||| | | ||||| | |||||||| |||| || || AAACCCACTC CTAGTC-AAC TAGTGTAGAG CCGAGCCAAA TTCCGAAAAT AGCGCCATTT 394 GGCCTAAGAT GACCCGACAC CCAAGGAGTG TCGGGCCCAT TAGAAAAGTC CACCTTGAGT 34405 | ||||||| ||| | | || |||||| ||| | | |||||| ||| ||| | |||||||||| GAACTAAGAT GACTCAATAC CCAAGGCGTG TTGAGCCCAT TAG--AAGAC CACCTTGAGT 452 C-CAAAGAGC CTGCGGCTCG ATAGGACGCT CATGTTTGT- TGTTTAAATT TGAAGGATGT 34347 | ||| || | | || | ||||| | ||| || | |||||||||| |||||| ||| CTAAAACAGT CCACTGCCTA AATGGACGTT CATACTTATG TGTTTAAATT TGAAGGGTGT 512 ATTGCGTGTT T-AACGAGTT GTTGTATCGG GGGGATTGAA AATTAACTAG TTGTATGTTT 34288 || |||| | | | | |||| || ||| | || |||||| | | || || || ATACGTTGTT TGAGAAAATC ATTGTCTCAT AGGG--TAAA AATTAAGTTA TAGTTTGCTT 570 TTGTAGATGT CAAGTCAGTT CCTTCACTTC AAAATGGTCA CCCAGGCACC CGACATTCTT 34228 || | AGGTTAAA.. .......... .......... .......... .......... .......... 578 CGAGTATGGT GGGAAAATCT TAAGGAGTGT CAGAAGAGAG AGATCTCGAT TTACTTGGGT 34168 .......... .......... .......... .......... .......... .......... 578 CACCTACCTT CGATAATGGA CTTCAAGGTA TGGCCCACGT TTATCGAAGT CATCACCCGA 34108 .......... .......... .......... .......... .......... .......... 578 TTCTGGGACG ATAAGAAGAT GGTCTTTCGA TTTGGAGATG TCGAAATAAA ACCCACATTA 34048 .......... .......... .......... .......... .......... .......... 578 GAAGAGATCA AAGATTGCCT TGACTCGATT GGGACGTGTG GCAAAAGGAA AAAGCGTCCC 33988 .......... .......... .......... .......... .......... .......... 578 GATCATCACA TTCTCCTGCC AGATAGGCCA ACCGAGACTG AGCTAAGAGA CATATTATCC 33928 .......... .......... .......... .......... .......... .......... 578 CTAGTGAATG CGAATTGGCT AGAGACTCAC AACATTCCAC TGATGAGGTT TTTCGAGAGG 33868 .......... .......... .......... .......... .......... .......... 578 TGGGGGCACG ACAATTATTT TAGATTGTTC CCGGACGAAT TCCATGATCA CAGTACTTGG 33808 .......... .......... .......... .......... .......... .......... 578 AGGCAAACTC AAGCTATCGC TTTCTCCGCA TGCCTCTTGG GAACTATGGT GTTCCCTAAA 33748 .......... .......... .......... .......... .......... .......... 578 GACGAAGGAA AAGAGATCGA CACCCGGGTA ATAATGGTAG TGAATGCCAT GTTCAGAGGA 33688 .......... .......... .......... .......... .......... .......... 578 GTCGGTAGAA AATCTGAAGA AAAGAAATAT TGCTGTTTGG CCCCAGTCAT CCTGTCCGAC 33628 .......... .......... .......... .......... .......... .......... 578 ATTTACCGAT CTTTGAGCCT GTGCAAGAAT GGTTTTCCGT TTTTCCAAGG TTGCAACATC 33568 .......... .......... .......... .......... .......... .......... 578 TTACTTCAAT GGTGGTTGAC GGAGCATCTA TGCAAAAGAG ACAACCCCCA GCTACATGGT 33508 .......... .......... .......... .......... .......... .......... 578 TTGGCCGAAC CAAGTCAAAC AAGTCCTCTC AATAATTACG AGTTCTACTT GAGTATCCGT 33448 .......... .......... .......... .......... .......... .......... 578 AAATTTCCAA TTCACACCAC CAGGGATGCG TGGGCAAAGG TGTTTTACAA TTTGAAAGAA 33388 .......... .......... .......... .......... .......... .......... 578 GGAGACATAC AATGGGTATT ACCGAGCTTC AGGTCTCAGA TGATAGCAGC CCAAGGGGCC 33328 .......... .......... .......... .......... .......... .......... 578 AAATTGCCAT TTTTAGTCCT TCCCGGCATC AGAGGATTGC GTCCTTACAA CCCGACACGA 33268 .......... .......... .......... .......... .......... .......... 578 GTAATGCGGC AATTTGGGAA AGTCCAAATC ATACCCGCCC AAGGAGATGC CAGCTCTTTC 33208 .......... .......... .......... .......... .......... .......... 578 ATTGTTGATT ACAACGGGAA GGACAAAATA CCTTTCGCTA AAATTATCCT CCAGGAATGG 33148 .......... .......... .......... .......... .......... .......... 578 GCCGGACGTG TCAACATGAA GTGGGAGGTC ACCGAAGATA GGTATGGAGC TGGGTATGTC 33088 .......... .......... .......... .......... .......... .......... 578 GACGAATATA AGACATGGTT GCATAATAAT TTGCATGGTG TAGTGGATCC GACACCACGC 33028 .......... .......... .......... .......... .......... .......... 578 ACAAGTCGGA AAATCGAAGA CGTGGAGACA AGGCTTCAGA TTCACGCGTA CCATTTTCAG 32968 .......... .......... .......... .......... .......... .......... 578 CAAGAGTGGG ACCGGAGGGA GCAGGAATTC TATAAGAAAG AACAGGAATT TCAACAAAGG 32908 .......... .......... .......... .......... .......... .......... 578 GAGCAAGCGT ACCAACTCCG GGAATTAGAA AATCAGAGAG TTTTAGCCGT AATGTCACAA 32848 .......... .......... .......... .......... .......... .......... 578 GAATTAGCTG ACACAAGGAC TTGTCTAATG CGTTTGGACA CTATTTTGGA CGAGCAGATG 32788 .......... .......... .......... .......... .......... .......... 578 AACACCTTAC AAGCCGTACC AACATCTTCC AAAGCTGCGT TCGCGGAGCC ATACGTGTTC 32728 .......... .......... .......... .......... .......... .......... 578 ACCAGCAAAT GCATTATCCG AGAAGAAGTG GAGAAGGCCA GAAGAGGAGC TGGATCATCG 32668 .......... .......... .......... .......... .......... .......... 578 ACCTTTTAAC TCCCCTGCGT GGGATTGATT TTATATGTGT ATTTGCACTA CATCCCCTTC 32608 .......... .......... .......... .......... .......... .......... 578 CCAAGATATA TCCCGTTTAA TTTTGATTGT GTAATGAACG CTATGACATC TAGTGAAATT 32548 .......... .......... .......... .......... .......... .......... 578 TGTTTCGGGG ATACAATTAC TTATTTAAAT GGCGCAATAC ATCCTTCAGA TCGCTAGGCC 32488 .......... .......... .......... .......... .......... .......... 578 TACCCTTGGC ACAAAAGGGT CACATGCATG TTTAGGACAC GATATATTTG TTTAAATGTT 32428 .......... .......... .......... .......... .......... .......... 578 TATATGTTAT GTTGCTTTGA TTGAGGATAT CGTAAACCCA CTCCTAGCCA AAATTCAAAA 32368 .......... .......... .......... .......... .......... .......... 578 GAGTATACAG AAGCCAACAT TACAAATGTC CGACCAAAAT TCCCGAGTCC CAAGTTTCTC 32308 .......... .......... .......... .......... .......... .......... 578 ACACAAAATC CATACCATAA ATCCTAAATA CCGCTCTATC ATCTCAGGAA AGTCGAATCA 32248 ||| || | ||| .......... .......... .......... .......... .......GAA AG-AGCTTCA 590 CC 32246 || CC 592 hqPGS_C08HBa0235H18.1-_SGN-E549958+ (34766 34280) ******************************************************************************** EST sequence 659 +strand 723 n (File: SGN-E550487+) 1 TCGAATTTAT TTTATTTTTT TCAAATTGAG AAAATTTTTG TTTTATTATT ATGTTATACC 61 CCGTATTTTT ATATTCGCTG ATTATTTGTA TATTGTATTT ATTCATTATT TATCTTGTTG 121 TTGGTATATT ATCATTGCAT TCATGGCATA ATATTTTCCG TCAAACGATA ATTATTTCAT 181 TTTCACTAAA GGACGATTAT GCAGGTTCGC AGTCGTTCAT TAACCAAAGA TTTTCTCGGG 241 ACACCCTGAC GAGTGTAGTT GGCTACTTGA TAGTCAACGA TCATTAACTG TCCCAACCCA 301 AGTAGTCCGC TTGGATCACC TTTTCCACTC AAAATAAAAC CCACTCCTAG TCAACTAGTG 361 TAGAGCCGAG CCAAATTCCG AAAATAGCGC CATTTGAACT AAGATGACTC AATACCCAAG 421 GCGTGTTGAG CCCATTAGAA GACCACCTTG AGTCTAAAAC AGTCCACTGC CTAAATGGAC 481 GTTCATACTT ATGTGTTTAA ATTTGAAGGG TGTATACGTT GTTTGAGAAA ATCATTGTCT 541 CATAGGGTAA AAATTAAGTT ATAGTTTGCT TAGGTTAAAG AAAGAGCTTC ACCGGCTACT 601 AGCATATTCG AAGATATTGG CACCCGGGGA TGACAACAAA TCAAGAAAGC AGAAGGATCT 661 TTCGTGGAGG CATAGTTTAN GGTCATATCC CTGTGTGGGA CTGATTATTT TGTATACATT 721 TCC Predicted gene structure (within gDNA segment 37627 to 29845): Exon 1 35480 35471 ( 10 n); cDNA 84 93 ( 10 n); score: 0.600 Intron 1 35470 34767 ( 704 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.54) Exon 2 34766 34280 ( 487 n); cDNA 94 579 ( 486 n); score: 0.742 Intron 2 34279 32261 (2019 n); Pd: 0.000 (s: 0.60), Pa: 0.774 (s: 0) Exon 3 32260 32246 ( 15 n); cDNA 580 593 ( 14 n); score: 0.733 PPA cDNA 21 10 MATCH C08HBa0235H18.1- SGN-E550487+ 0.742 512 0.708 C PGS_C08HBa0235H18.1-_SGN-E550487+ (35480 35471,34766 34280,32260 32246) Alignment (genomic DNA sequence = upper lines): ATTAGGACAG GTACAGAAAT GGGCTAAAAA ACCCAAAGGC AGGTGGGTCC AACATTCGGT 35421 ||| | | | ATTTGTATAT .......... .......... .......... .......... .......... 93 CAAGGATAAC AGAACCCGGA GTTGGACCCA AATCTCTCTC TCTCTATCCT TCTCTTTACT 35361 .......... .......... .......... .......... .......... .......... 93 ATTTGCTTAT CTTATTTTGT TTTCAATGCC GTTAGCTTAG GATTAGGAAA CTCCAAACCC 35301 .......... .......... .......... .......... .......... .......... 93 TCATCGAACG CCTGTTATTT TATCAAACCT AAAAAATTTT AAAACTAACT TCTAAATGAT 35241 .......... .......... .......... .......... .......... .......... 93 AAATTGTTTC AAATTCGTAA GGCTTGTTTA GATAAAACCT TGAGTAAGCT TAACTTTGAA 35181 .......... .......... .......... .......... .......... .......... 93 ATGGTTTCGT AAACTGGCAA GATAAACAAT AAATATTTCA AAATTGGCTA AGTTTGGCTA 35121 .......... .......... .......... .......... .......... .......... 93 AGTAAGTCAT GTTAAAAGTT CAAATAAATT TGCAAAGGTT AAAAATAAAA ATAATCAAAT 35061 .......... .......... .......... .......... .......... .......... 93 AGTTAATCAT TGGAAAACCG TAAGTTAACG GAGTGTTTTG GGTGCCTTAC ACCTTCCTAA 35001 .......... .......... .......... .......... .......... .......... 93 GATACTAATA GGAATCCCGA ACCCTTAAAA TGTTTCAAAA CAATTTTTTC TGTTTAAGTT 34941 .......... .......... .......... .......... .......... .......... 93 GTTTAGAAAC GAAGTTTTCT TGATTTTTCT TAAAAATTAA GTGGCGACTC CTAAAAGTCT 34881 .......... .......... .......... .......... .......... .......... 93 AAAAACAAAC TCTTTTCGAA AATCACCACC CTTTTTCGAT AAAACAGAAA TGGCGACTCC 34821 .......... .......... .......... .......... .......... .......... 93 ACTGGGGACT TGGAGGATTC TAACCTTAAG ATTAACGTAT TTGATTATTT GTGATTAACT 34761 | | | .......... .......... .......... .......... .......... ....TGTATT 99 GTTTAAATGT TTAAATTGTT -TAGATTTTT AAACTGCTGC ATACATAGCA TACATA-CTT 34703 || | | | ||| ||||| | | | | | | | ||| || ||| ||| || ||| || TATTCATTAT TTATCTTGTT GTTGGTATAT TATC-ATTGC ATTCATGGCA TA-ATATTTT 157 CCGTCAAACG ACACTTTTTT ACATTTCCAC TAAAGGACGA TTATGCGGGT TCGCAGTCGT 34643 |||||||||| | | || ||| ||||| ||| |||||||||| |||||| ||| |||||||||| CCGTCAAACG ATAATTATTT -CATTTTCAC TAAAGGACGA TTATGCAGGT TCGCAGTCGT 216 TCGTTAACCA AAAATCTTCT CGGGGCACCC TGACGAGTGT AGTTGATTAC TTGATAGTCA 34583 || ||||||| || || |||| |||| ||||| |||||||||| ||||| ||| |||||||||| TCATTAACCA AAGATTTTCT CGGGACACCC TGACGAGTGT AGTTGGCTAC TTGATAGTCA 276 ACGATCGTTA ATTGTTCCAG CCCAAGTAGT CCGCTTGGGT TACCCATTCC ACTCTAAATA 34523 |||||| ||| | ||| ||| |||||||||| |||||||| | ||| |||| |||| ||||| ACGATCATTA ACTGTCCCAA CCCAAGTAGT CCGCTTGGAT CACCTTTTCC ACTCAAAATA 336 CAACCCACTC TTAGTCAAAC TAGGATAGAG CGAAACCAAA TCCCGAAAAT AGCG-CA-TT 34465 ||||||||| ||||| ||| ||| ||||| | | ||||| | |||||||| |||| || || AAACCCACTC CTAGTC-AAC TAGTGTAGAG CCGAGCCAAA TTCCGAAAAT AGCGCCATTT 395 GGCCTAAGAT GACCCGACAC CCAAGGAGTG TCGGGCCCAT TAGAAAAGTC CACCTTGAGT 34405 | ||||||| ||| | | || |||||| ||| | | |||||| ||| ||| | |||||||||| GAACTAAGAT GACTCAATAC CCAAGGCGTG TTGAGCCCAT TAG--AAGAC CACCTTGAGT 453 C-CAAAGAGC CTGCGGCTCG ATAGGACGCT CATGTTTGT- TGTTTAAATT TGAAGGATGT 34347 | ||| || | | || | ||||| | ||| || | |||||||||| |||||| ||| CTAAAACAGT CCACTGCCTA AATGGACGTT CATACTTATG TGTTTAAATT TGAAGGGTGT 513 ATTGCGTGTT T-AACGAGTT GTTGTATCGG GGGGATTGAA AATTAACTAG TTGTATGTTT 34288 || |||| | | | | |||| || ||| | || |||||| | | || || || ATACGTTGTT TGAGAAAATC ATTGTCTCAT AGGG--TAAA AATTAAGTTA TAGTTTGCTT 571 TTGTAGATGT CAAGTCAGTT CCTTCACTTC AAAATGGTCA CCCAGGCACC CGACATTCTT 34228 || | AGGTTAAA.. .......... .......... .......... .......... .......... 579 CGAGTATGGT GGGAAAATCT TAAGGAGTGT CAGAAGAGAG AGATCTCGAT TTACTTGGGT 34168 .......... .......... .......... .......... .......... .......... 579 CACCTACCTT CGATAATGGA CTTCAAGGTA TGGCCCACGT TTATCGAAGT CATCACCCGA 34108 .......... .......... .......... .......... .......... .......... 579 TTCTGGGACG ATAAGAAGAT GGTCTTTCGA TTTGGAGATG TCGAAATAAA ACCCACATTA 34048 .......... .......... .......... .......... .......... .......... 579 GAAGAGATCA AAGATTGCCT TGACTCGATT GGGACGTGTG GCAAAAGGAA AAAGCGTCCC 33988 .......... .......... .......... .......... .......... .......... 579 GATCATCACA TTCTCCTGCC AGATAGGCCA ACCGAGACTG AGCTAAGAGA CATATTATCC 33928 .......... .......... .......... .......... .......... .......... 579 CTAGTGAATG CGAATTGGCT AGAGACTCAC AACATTCCAC TGATGAGGTT TTTCGAGAGG 33868 .......... .......... .......... .......... .......... .......... 579 TGGGGGCACG ACAATTATTT TAGATTGTTC CCGGACGAAT TCCATGATCA CAGTACTTGG 33808 .......... .......... .......... .......... .......... .......... 579 AGGCAAACTC AAGCTATCGC TTTCTCCGCA TGCCTCTTGG GAACTATGGT GTTCCCTAAA 33748 .......... .......... .......... .......... .......... .......... 579 GACGAAGGAA AAGAGATCGA CACCCGGGTA ATAATGGTAG TGAATGCCAT GTTCAGAGGA 33688 .......... .......... .......... .......... .......... .......... 579 GTCGGTAGAA AATCTGAAGA AAAGAAATAT TGCTGTTTGG CCCCAGTCAT CCTGTCCGAC 33628 .......... .......... .......... .......... .......... .......... 579 ATTTACCGAT CTTTGAGCCT GTGCAAGAAT GGTTTTCCGT TTTTCCAAGG TTGCAACATC 33568 .......... .......... .......... .......... .......... .......... 579 TTACTTCAAT GGTGGTTGAC GGAGCATCTA TGCAAAAGAG ACAACCCCCA GCTACATGGT 33508 .......... .......... .......... .......... .......... .......... 579 TTGGCCGAAC CAAGTCAAAC AAGTCCTCTC AATAATTACG AGTTCTACTT GAGTATCCGT 33448 .......... .......... .......... .......... .......... .......... 579 AAATTTCCAA TTCACACCAC CAGGGATGCG TGGGCAAAGG TGTTTTACAA TTTGAAAGAA 33388 .......... .......... .......... .......... .......... .......... 579 GGAGACATAC AATGGGTATT ACCGAGCTTC AGGTCTCAGA TGATAGCAGC CCAAGGGGCC 33328 .......... .......... .......... .......... .......... .......... 579 AAATTGCCAT TTTTAGTCCT TCCCGGCATC AGAGGATTGC GTCCTTACAA CCCGACACGA 33268 .......... .......... .......... .......... .......... .......... 579 GTAATGCGGC AATTTGGGAA AGTCCAAATC ATACCCGCCC AAGGAGATGC CAGCTCTTTC 33208 .......... .......... .......... .......... .......... .......... 579 ATTGTTGATT ACAACGGGAA GGACAAAATA CCTTTCGCTA AAATTATCCT CCAGGAATGG 33148 .......... .......... .......... .......... .......... .......... 579 GCCGGACGTG TCAACATGAA GTGGGAGGTC ACCGAAGATA GGTATGGAGC TGGGTATGTC 33088 .......... .......... .......... .......... .......... .......... 579 GACGAATATA AGACATGGTT GCATAATAAT TTGCATGGTG TAGTGGATCC GACACCACGC 33028 .......... .......... .......... .......... .......... .......... 579 ACAAGTCGGA AAATCGAAGA CGTGGAGACA AGGCTTCAGA TTCACGCGTA CCATTTTCAG 32968 .......... .......... .......... .......... .......... .......... 579 CAAGAGTGGG ACCGGAGGGA GCAGGAATTC TATAAGAAAG AACAGGAATT TCAACAAAGG 32908 .......... .......... .......... .......... .......... .......... 579 GAGCAAGCGT ACCAACTCCG GGAATTAGAA AATCAGAGAG TTTTAGCCGT AATGTCACAA 32848 .......... .......... .......... .......... .......... .......... 579 GAATTAGCTG ACACAAGGAC TTGTCTAATG CGTTTGGACA CTATTTTGGA CGAGCAGATG 32788 .......... .......... .......... .......... .......... .......... 579 AACACCTTAC AAGCCGTACC AACATCTTCC AAAGCTGCGT TCGCGGAGCC ATACGTGTTC 32728 .......... .......... .......... .......... .......... .......... 579 ACCAGCAAAT GCATTATCCG AGAAGAAGTG GAGAAGGCCA GAAGAGGAGC TGGATCATCG 32668 .......... .......... .......... .......... .......... .......... 579 ACCTTTTAAC TCCCCTGCGT GGGATTGATT TTATATGTGT ATTTGCACTA CATCCCCTTC 32608 .......... .......... .......... .......... .......... .......... 579 CCAAGATATA TCCCGTTTAA TTTTGATTGT GTAATGAACG CTATGACATC TAGTGAAATT 32548 .......... .......... .......... .......... .......... .......... 579 TGTTTCGGGG ATACAATTAC TTATTTAAAT GGCGCAATAC ATCCTTCAGA TCGCTAGGCC 32488 .......... .......... .......... .......... .......... .......... 579 TACCCTTGGC ACAAAAGGGT CACATGCATG TTTAGGACAC GATATATTTG TTTAAATGTT 32428 .......... .......... .......... .......... .......... .......... 579 TATATGTTAT GTTGCTTTGA TTGAGGATAT CGTAAACCCA CTCCTAGCCA AAATTCAAAA 32368 .......... .......... .......... .......... .......... .......... 579 GAGTATACAG AAGCCAACAT TACAAATGTC CGACCAAAAT TCCCGAGTCC CAAGTTTCTC 32308 .......... .......... .......... .......... .......... .......... 579 ACACAAAATC CATACCATAA ATCCTAAATA CCGCTCTATC ATCTCAGGAA AGTCGAATCA 32248 ||| || | ||| .......... .......... .......... .......... .......GAA AG-AGCTTCA 591 CC 32246 || CC 593 hqPGS_C08HBa0235H18.1-_SGN-E550487+ (34766 34280) ******************************************************************************** EST sequence 137 -strand 713 n (File: SGN-E550480-) 1 TTTATTTTTT TCAAATCGAG AAAATTTTGT TTTATTATTA TGTTATACCT TGTATTTTTA 61 TATTCGCTGA TTATTCGTAT ATTGTATTTA TTCATTATTT ATCTTGTAGT TGGTATATTA 121 TCATTGCATT CATGGCATAA TATTTTCCGT CAAACGATAA TTATTTCATT TTCACTAAAG 181 GACGATTATG CAGGTTCGCA GTCGTTCATT AACCAAAGAT TTTCTCGGGA CACCCTGACG 241 AGTGTAGTTG GCTACTTGAT AGTCAACGAT CATTAACTGT CCCAACCCAA GTAGTCCGCT 301 TGGATCACCT TTTCCACTCA AAATAAAACC CACTCCTAGT CAACTAGTGT AGAGCCGAGC 361 CAAATTCCGA AAATAGCGCC ATTCGAACTA AGATGACTCA ATACCCAAGG CGTGTTGAGC 421 CCATTAGAAG ACCACCTTGA GTCTAAAACA GTCCACTGCC TAAATGGACG TTCATACTTA 481 TGTGTTTAAA TTTGAAGGGT GTATCCGTTG TTTGAGAAAA TCATTGTCTC ATAGGGTAAA 541 AATTAAGTTA TAGTTTGCTT AGGTTAAAGA AAGAGCTTCC CCGGCTACTA GCATATTCGA 601 AGATATTGGC ACCCGGGGAT GACAACAAAT CAAGAAAGCA GAAGGATCTT TCGTGGAGGC 661 ATAGTTTAGG GTCATATCCC TGTGTGGGAC TGAGTATTTT GTATACATTT CCC Predicted gene structure (within gDNA segment 37527 to 29845): Exon 1 35827 35818 ( 10 n); cDNA 93 102 ( 10 n); score: 0.700 Intron 1 35817 35481 ( 337 n); Pd: 0.990 (s: 0), Pa: 0.998 (s: 0) Exon 2 35480 35471 ( 10 n); cDNA 103 112 ( 10 n); score: 0.300 Intron 2 35470 34738 ( 733 n); Pd: 0.000 (s: 0), Pa: 0.982 (s: 0.66) Exon 3 34737 34284 ( 454 n); cDNA 113 564 ( 452 n); score: 0.760 PPA cDNA 11 1 MATCH C08HBa0235H18.1- SGN-E550480- 0.760 474 0.665 C PGS_C08HBa0235H18.1-_SGN-E550480- (35827 35818,35480 35471,34737 34284) Alignment (genomic DNA sequence = upper lines): CATTATAAAG ATATCCTTGT TATGCTTTAG AACCTTGCTT ATTCTAATTG TAGTTTTAAA 35768 |||||| | CATTATTTAT .......... .......... .......... .......... .......... 102 AATGCCAATC TTCATTTTAT CGTTTTTTTT GTGACATGTG AAAACTCCCC GTGAGTCCAT 35708 .......... .......... .......... .......... .......... .......... 102 TATGGGAATC TTATTATCCT CCTCGCATTT CGAGAGAGTC TTGAAGACTC TGAACTTTAT 35648 .......... .......... .......... .......... .......... .......... 102 CGAGTCAATT CATCAAAACG AGCAAGTGTA GAAAGACAAG GGTCATGGAG ATTGAAGACG 35588 .......... .......... .......... .......... .......... .......... 102 ATGGACTAAA AGACTTTTCT TTCGTTTTAT TTTACTTTGC ATATTTTGTA ATGGGCCTAA 35528 .......... .......... .......... .......... .......... .......... 102 GCCCTCTTGT CGTTTTTTTG TTTTCTATAT TATGTTTGTA TGTTTAGATT AGGACAGGTA 35468 || | .......... .......... .......... .......... .......CTT GTAGTTG... 112 CAGAAATGGG CTAAAAAACC CAAAGGCAGG TGGGTCCAAC ATTCGGTCAA GGATAACAGA 35408 .......... .......... .......... .......... .......... .......... 112 ACCCGGAGTT GGACCCAAAT CTCTCTCTCT CTATCCTTCT CTTTACTATT TGCTTATCTT 35348 .......... .......... .......... .......... .......... .......... 112 ATTTTGTTTT CAATGCCGTT AGCTTAGGAT TAGGAAACTC CAAACCCTCA TCGAACGCCT 35288 .......... .......... .......... .......... .......... .......... 112 GTTATTTTAT CAAACCTAAA AAATTTTAAA ACTAACTTCT AAATGATAAA TTGTTTCAAA 35228 .......... .......... .......... .......... .......... .......... 112 TTCGTAAGGC TTGTTTAGAT AAAACCTTGA GTAAGCTTAA CTTTGAAATG GTTTCGTAAA 35168 .......... .......... .......... .......... .......... .......... 112 CTGGCAAGAT AAACAATAAA TATTTCAAAA TTGGCTAAGT TTGGCTAAGT AAGTCATGTT 35108 .......... .......... .......... .......... .......... .......... 112 AAAAGTTCAA ATAAATTTGC AAAGGTTAAA AATAAAAATA ATCAAATAGT TAATCATTGG 35048 .......... .......... .......... .......... .......... .......... 112 AAAACCGTAA GTTAACGGAG TGTTTTGGGT GCCTTACACC TTCCTAAGAT ACTAATAGGA 34988 .......... .......... .......... .......... .......... .......... 112 ATCCCGAACC CTTAAAATGT TTCAAAACAA TTTTTTCTGT TTAAGTTGTT TAGAAACGAA 34928 .......... .......... .......... .......... .......... .......... 112 GTTTTCTTGA TTTTTCTTAA AAATTAAGTG GCGACTCCTA AAAGTCTAAA AACAAACTCT 34868 .......... .......... .......... .......... .......... .......... 112 TTTCGAAAAT CACCACCCTT TTTCGATAAA ACAGAAATGG CGACTCCACT GGGGACTTGG 34808 .......... .......... .......... .......... .......... .......... 112 AGGATTCTAA CCTTAAGATT AACGTATTTG ATTATTTGTG ATTAACTGTT TAAATGTTTA 34748 .......... .......... .......... .......... .......... .......... 112 AATTGTTTAG ATTTTTAAAC TGCTGCATAC ATAGCATACA TA-CTTCCGT CAAACGACAC 34689 | | | | | ||||| | || ||||| | || |||||| ||||||| | .......... GTATATTATC -ATTGCATTC ATGGCATA-A TATTTTCCGT CAAACGATAA 160 TTTTTTACAT TTCCACTAAA GGACGATTAT GCGGGTTCGC AGTCGTTCGT TAACCAAAAA 34629 || ||| ||| || ||||||| |||||||||| || ||||||| |||||||| | |||||||| | TTATTT-CAT TTTCACTAAA GGACGATTAT GCAGGTTCGC AGTCGTTCAT TAACCAAAGA 219 TCTTCTCGGG GCACCCTGAC GAGTGTAGTT GATTACTTGA TAGTCAACGA TCGTTAATTG 34569 | |||||||| ||||||||| |||||||||| | ||||||| |||||||||| || |||| || TTTTCTCGGG ACACCCTGAC GAGTGTAGTT GGCTACTTGA TAGTCAACGA TCATTAACTG 279 TTCCAGCCCA AGTAGTCCGC TTGGGTTACC CATTCCACTC TAAATACAAC CCACTCTTAG 34509 | ||| |||| |||||||||| |||| | ||| |||||||| ||||| ||| |||||| ||| TCCCAACCCA AGTAGTCCGC TTGGATCACC TTTTCCACTC AAAATAAAAC CCACTCCTAG 339 TCAAACTAGG ATAGAGCGAA ACCAAATCCC GAAAATAGCG -CATT-GGCC TAAGATGACC 34451 || |||||| |||||| | |||||| || |||||||||| |||| | | ||||||||| TC-AACTAGT GTAGAGCCGA GCCAAATTCC GAAAATAGCG CCATTCGAAC TAAGATGACT 398 CGACACCCAA GGAGTGTCGG GCCCATTAGA AAAGTCCACC TTGAGTC-CA AAGAGCCTGC 34392 | | |||||| || |||| | ||||||||| ||| ||||| ||||||| | || || | | CAATACCCAA GGCGTGTTGA GCCCATTAG- -AAGACCACC TTGAGTCTAA AACAGTCCAC 456 GGCTCGATAG GACGCTCATG TTTGT-TGTT TAAATTTGAA GGATGTATTG CGTGTTT-AA 34334 || | | |||| |||| || | |||| |||||||||| || ||||| ||||| | TGCCTAAATG GACGTTCATA CTTATGTGTT TAAATTTGAA GGGTGTATCC GTTGTTTGAG 516 CGAGTTGTTG TATCGGGGGG ATTGAAAATT AACTAGTTGT ATGTTTTTGT 34284 | | ||| | || ||| | |||||| || | | || || || || AAAATCATTG TCTCATAGGG --TAAAAATT AAGTTATAGT TTGCTTAGGT 564 hqPGS_C08HBa0235H18.1-_SGN-E550480- (34737 34284) ******************************************************************************** EST sequence 971 +strand 533 n (File: SGN-E233763+) 1 AATTTATTTT ATTTTTTTCA AATTGAGAAA ATTTTTGTTT TATTATTATG TTATACCTTG 61 TATTTTTATA TTCGCTGATT ATTTGTATAT TGTATTTATT CATTATTTAT CTTGTTGTTG 121 GTATATTATC ATTGCATTCA TGGCATAATA TTTTCCGTCA AACGATAATT ATTTCATTTT 181 CACTAAAGGA CGATTATGCA GGTTCGCAGT CGTTCATTAA CCAAAGATTT TCTCGGGACA 241 CCCTGACGAG TGTAGTTGGC TACTTGATAG TCAACGATCA TTAACTGTCC CAACCCAAGT 301 AGTCCGCTTG GATCACCTTT TCCACTCAAA ATAAAACCCA CTCCTAGTCA ACTAGTGTAG 361 AGCCGAGCCA AATTCCGAAA ATAGCGCCAT TTGAACTAAG ATGACTCAAT ACCCAAGGCG 421 TGTTGAGCCC ATTAGAAGAC CACCTTGAGT CTAAAACAGT CCACTGCCTA AATGGACGTT 481 CATACTTATG TGTTTAAATT TGNAAGGTGT ATACGTTGTT TGAGAAAATC ATT Predicted gene structure (within gDNA segment 37597 to 31715): Exon 1 35480 35471 ( 10 n); cDNA 81 90 ( 10 n); score: 0.600 Intron 1 35470 34767 ( 704 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.54) Exon 2 34766 34400 ( 367 n); cDNA 91 455 ( 365 n); score: 0.796 PPA cDNA 18 7 MATCH C08HBa0235H18.1- SGN-E233763+ 0.796 377 0.707 C PGS_C08HBa0235H18.1-_SGN-E233763+ (35480 35471,34766 34400) Alignment (genomic DNA sequence = upper lines): ATTAGGACAG GTACAGAAAT GGGCTAAAAA ACCCAAAGGC AGGTGGGTCC AACATTCGGT 35421 ||| | | | ATTTGTATAT .......... .......... .......... .......... .......... 90 CAAGGATAAC AGAACCCGGA GTTGGACCCA AATCTCTCTC TCTCTATCCT TCTCTTTACT 35361 .......... .......... .......... .......... .......... .......... 90 ATTTGCTTAT CTTATTTTGT TTTCAATGCC GTTAGCTTAG GATTAGGAAA CTCCAAACCC 35301 .......... .......... .......... .......... .......... .......... 90 TCATCGAACG CCTGTTATTT TATCAAACCT AAAAAATTTT AAAACTAACT TCTAAATGAT 35241 .......... .......... .......... .......... .......... .......... 90 AAATTGTTTC AAATTCGTAA GGCTTGTTTA GATAAAACCT TGAGTAAGCT TAACTTTGAA 35181 .......... .......... .......... .......... .......... .......... 90 ATGGTTTCGT AAACTGGCAA GATAAACAAT AAATATTTCA AAATTGGCTA AGTTTGGCTA 35121 .......... .......... .......... .......... .......... .......... 90 AGTAAGTCAT GTTAAAAGTT CAAATAAATT TGCAAAGGTT AAAAATAAAA ATAATCAAAT 35061 .......... .......... .......... .......... .......... .......... 90 AGTTAATCAT TGGAAAACCG TAAGTTAACG GAGTGTTTTG GGTGCCTTAC ACCTTCCTAA 35001 .......... .......... .......... .......... .......... .......... 90 GATACTAATA GGAATCCCGA ACCCTTAAAA TGTTTCAAAA CAATTTTTTC TGTTTAAGTT 34941 .......... .......... .......... .......... .......... .......... 90 GTTTAGAAAC GAAGTTTTCT TGATTTTTCT TAAAAATTAA GTGGCGACTC CTAAAAGTCT 34881 .......... .......... .......... .......... .......... .......... 90 AAAAACAAAC TCTTTTCGAA AATCACCACC CTTTTTCGAT AAAACAGAAA TGGCGACTCC 34821 .......... .......... .......... .......... .......... .......... 90 ACTGGGGACT TGGAGGATTC TAACCTTAAG ATTAACGTAT TTGATTATTT GTGATTAACT 34761 | | | .......... .......... .......... .......... .......... ....TGTATT 96 GTTTAAATGT TTAAATTGTT -TAGATTTTT AAACTGCTGC ATACATAGCA TACATA-CTT 34703 || | | | ||| ||||| | | | | | | | ||| || ||| ||| || ||| || TATTCATTAT TTATCTTGTT GTTGGTATAT TATC-ATTGC ATTCATGGCA TA-ATATTTT 154 CCGTCAAACG ACACTTTTTT ACATTTCCAC TAAAGGACGA TTATGCGGGT TCGCAGTCGT 34643 |||||||||| | | || ||| ||||| ||| |||||||||| |||||| ||| |||||||||| CCGTCAAACG ATAATTATTT -CATTTTCAC TAAAGGACGA TTATGCAGGT TCGCAGTCGT 213 TCGTTAACCA AAAATCTTCT CGGGGCACCC TGACGAGTGT AGTTGATTAC TTGATAGTCA 34583 || ||||||| || || |||| |||| ||||| |||||||||| ||||| ||| |||||||||| TCATTAACCA AAGATTTTCT CGGGACACCC TGACGAGTGT AGTTGGCTAC TTGATAGTCA 273 ACGATCGTTA ATTGTTCCAG CCCAAGTAGT CCGCTTGGGT TACCCATTCC ACTCTAAATA 34523 |||||| ||| | ||| ||| |||||||||| |||||||| | ||| |||| |||| ||||| ACGATCATTA ACTGTCCCAA CCCAAGTAGT CCGCTTGGAT CACCTTTTCC ACTCAAAATA 333 CAACCCACTC TTAGTCAAAC TAGGATAGAG CGAAACCAAA TCCCGAAAAT AGCG-CA-TT 34465 ||||||||| ||||| ||| ||| ||||| | | ||||| | |||||||| |||| || || AAACCCACTC CTAGTC-AAC TAGTGTAGAG CCGAGCCAAA TTCCGAAAAT AGCGCCATTT 392 GGCCTAAGAT GACCCGACAC CCAAGGAGTG TCGGGCCCAT TAGAAAAGTC CACCTTGAGT 34405 | ||||||| ||| | | || |||||| ||| | | |||||| ||| ||| | |||||||||| GAACTAAGAT GACTCAATAC CCAAGGCGTG TTGAGCCCAT TAG--AAGAC CACCTTGAGT 450 CCAAA 34400 | ||| CTAAA 455 hqPGS_C08HBa0235H18.1-_SGN-E233763+ (34766 34400) ******************************************************************************** EST sequence 1040 +strand 620 n (File: SGN-E238551+) 1 ACGCCTTTTG CTTTATGAAA CTAAAAAATA AAAATTGAAG TTTTGAAACG ATAGAGGTTT 61 AAAATTTGAA AGTCTGCTTA GAGAGTTAAG GCTTAGAAAG TTTAACTAAG ACGGAATCTT 121 AAAAGATTAA TATCTCAAAT TTGCAAAGTT TGGCTAAGTA AATCGTGATA AAAGTTCAAA 181 TAAATTTGCA AAGGGTAAAA ATAAAAATAA TCAAATAAGT TAGTCGTTGG AAAACCGTAT 241 TTAACGGAGT GTCTTAGGTG CCTTAAACAC CTTCCTAAGA CGCTAATAAG AATCCCGAAT 301 CCTAAAAAAT ATTTTCAAAA CGACTTTTCT GTTTAAATTG TTTTGAGAAT GAGTTTTCTT 361 GATTTTTCTT AAAAATTAAG TGGCGACTCC TAAAGTCGAA AAATACTTTA AAATAAAACA 421 AACTCTTTTC GAAAAATCAC CTTTTTTCGA TAAAACAAAG CTTCTAGCTT GGACTGGATC 481 TTCTTCTTCA TGTCTTGATG CCTTGAAGTT CCGGCATGGA CTAGCTGTTT ATGTATTTTA 541 GCTTCTTAGA TACTCTTAGA TTTAGTAATT CGAAGTAGAT GTTCTTGTGA TGATAACTTC 601 CAGATTTTGG GAAATAATAG Predicted gene structure (within gDNA segment 37181 to 32016): Exon 1 35475 35463 ( 13 n); cDNA 81 92 ( 12 n); score: 0.615 Intron 1 35462 35187 ( 276 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.64) Exon 2 35186 34835 ( 352 n); cDNA 93 439 ( 347 n); score: 0.786 MATCH C08HBa0235H18.1- SGN-E238551+ 0.786 365 0.589 C PGS_C08HBa0235H18.1-_SGN-E238551+ (35475 35463,35186 34835) Alignment (genomic DNA sequence = upper lines): GACAGGTACA GAAATGGGCT AAAAAACCCA AAGGCAGGTG GGTCCAACAT TCGGTCAAGG 35416 || || || | | GAGAGTTA-A GGC....... .......... .......... .......... .......... 92 ATAACAGAAC CCGGAGTTGG ACCCAAATCT CTCTCTCTCT ATCCTTCTCT TTACTATTTG 35356 .......... .......... .......... .......... .......... .......... 92 CTTATCTTAT TTTGTTTTCA ATGCCGTTAG CTTAGGATTA GGAAACTCCA AACCCTCATC 35296 .......... .......... .......... .......... .......... .......... 92 GAACGCCTGT TATTTTATCA AACCTAAAAA ATTTTAAAAC TAACTTCTAA ATGATAAATT 35236 .......... .......... .......... .......... .......... .......... 92 GTTTCAAATT CGTAAGGCTT GTTTAGATAA AACCTTGAGT AAGCTTAACT TTGAAATGGT 35176 | | |||| | | .......... .......... .......... .......... .........T TAGAAA-GTT 102 TTCGTAAACT GGCAAGATAA ACAATAAATA TTTCAAAATT GGCTAAGTTT GGCTAAGTAA 35116 | ||| || | ||| | || |||| | || ||||| || |||||| |||||||||| TAACTAAGAC GGAATCTTAA AAGATTAATA TCTC-AAATT TGCAAAGTTT GGCTAAGTAA 161 GTCATGTTAA AAGTTCAAAT AAATTTGCAA AGGTTAAAAA TAAAAATAAT CAAAT-AGTT 35057 || || ||| |||||||||| |||||||||| ||| |||||| |||||||||| ||||| |||| ATCGTGATAA AAGTTCAAAT AAATTTGCAA AGGGTAAAAA TAAAAATAAT CAAATAAGTT 221 AATCATTGGA AAACCGTAAG TTAACGGAGT GTTTTGGGTG CCTT--ACAC CTTCCTAAGA 34999 | || ||||| ||||||| | |||||||||| || || |||| |||| |||| |||||||||| AGTCGTTGGA AAACCGT-AT TTAACGGAGT GTCTTAGGTG CCTTAAACAC CTTCCTAAGA 280 TACTAATAGG AATCCCGAAC CCT-TAAAAT -GTTTCAAAA CAATTTTTTC TGTTTAAGTT 34941 |||||| | ||||||||| ||| ||||| |||||||| | | ||||| ||||||| || CGCTAATAAG AATCCCGAAT CCTAAAAAAT ATTTTCAAAA CGA-CTTTTC TGTTTAAATT 339 GTTTAGAAAC GAAGTTTTCT TGATTTTTCT TAAAAATTAA GTGGCGACTC CTAAAAGTCT 34881 |||| || | |||||||| |||||||||| |||||||||| |||||||||| || |||||| GTTTTGAGAA TGAGTTTTCT TGATTTTTCT TAAAAATTAA GTGGCGACTC CT-AAAGTC- 397 AAAAACAAAC TCTTTTCGAA AATCACCACC CTTTTTCGAT AAAACA 34835 |||| | || | || | || || || | ||||||| ||| || GAAAA-ATAC T-TTAAAATA AAACA-AACT C-TTTTCGAA AAATCA 439 hqPGS_C08HBa0235H18.1-_SGN-E238551+ (35186 34835) ******************************************************************************** EST sequence 1068 +strand 666 n (File: SGN-E368629+) 1 ACGCCTTTTG CTTTATGAAA CTAAAAAATA AAAATTGAAG TTTTGAAACG ATAGAGGTTT 61 AAAATTTGAA AGTCTGCTTA GAGAGTTAAG GCTTAGAAAG TTTAACTAAG ACGGAATCTT 121 AAAAGATTAA TATCTCAAAT TTGCAAAGTT TGGCTAAGTA AATCGTGATA AAAGTTCAAA 181 TAAATTTGCA AAGGGTAAAA ATAAAAATAA TCAAATAAGT TAGTCGTTGG AAAACCGTAT 241 TTAACGGAGT GTCTTAGGTG CCTTAAACAC CTTCCTAAGA CGCTAATAAG AATCCCGAAT 301 CCTAAAAAAT ATTTTCAAAA CGACTTTTCT GTTTAAATTG TTTTGAGAAT GAGTTTTCTT 361 GATTTTTCTT AAAAATTAAG TGGCGACTCC TAAAGTCGAA AAATACTTTA AAATAAAACA 421 AACTCTTTTC GAAAAATCAC CTTTTTTCGA TAAAACAAAG CTTCTAGCTT GGACTGGATC 481 TTCTTCTTTA TGTCTTGATG CCTTGAAGTT TCGGCATGGA CTAACTGTGT TATGTATTTT 541 AGGCTCTTAG ATACTTCTAG ATTTAGTAAT TCGAAGTAGA TGTTCTTGTG ATGATAACTT 601 CCAGATTTTG GGAAATAATA GTTATTGAAT TGGTTTTTAT AAAAAAAAAA AAAAAAAAAA 661 AAAAAA Predicted gene structure (within gDNA segment 37181 to 31556): Exon 1 35475 35463 ( 13 n); cDNA 81 92 ( 12 n); score: 0.615 Intron 1 35462 35187 ( 276 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.64) Exon 2 35186 34835 ( 352 n); cDNA 93 439 ( 347 n); score: 0.786 PPA cDNA 639 666 MATCH C08HBa0235H18.1- SGN-E368629+ 0.786 365 0.548 C PGS_C08HBa0235H18.1-_SGN-E368629+ (35475 35463,35186 34835) Alignment (genomic DNA sequence = upper lines): GACAGGTACA GAAATGGGCT AAAAAACCCA AAGGCAGGTG GGTCCAACAT TCGGTCAAGG 35416 || || || | | GAGAGTTA-A GGC....... .......... .......... .......... .......... 92 ATAACAGAAC CCGGAGTTGG ACCCAAATCT CTCTCTCTCT ATCCTTCTCT TTACTATTTG 35356 .......... .......... .......... .......... .......... .......... 92 CTTATCTTAT TTTGTTTTCA ATGCCGTTAG CTTAGGATTA GGAAACTCCA AACCCTCATC 35296 .......... .......... .......... .......... .......... .......... 92 GAACGCCTGT TATTTTATCA AACCTAAAAA ATTTTAAAAC TAACTTCTAA ATGATAAATT 35236 .......... .......... .......... .......... .......... .......... 92 GTTTCAAATT CGTAAGGCTT GTTTAGATAA AACCTTGAGT AAGCTTAACT TTGAAATGGT 35176 | | |||| | | .......... .......... .......... .......... .........T TAGAAA-GTT 102 TTCGTAAACT GGCAAGATAA ACAATAAATA TTTCAAAATT GGCTAAGTTT GGCTAAGTAA 35116 | ||| || | ||| | || |||| | || ||||| || |||||| |||||||||| TAACTAAGAC GGAATCTTAA AAGATTAATA TCTC-AAATT TGCAAAGTTT GGCTAAGTAA 161 GTCATGTTAA AAGTTCAAAT AAATTTGCAA AGGTTAAAAA TAAAAATAAT CAAAT-AGTT 35057 || || ||| |||||||||| |||||||||| ||| |||||| |||||||||| ||||| |||| ATCGTGATAA AAGTTCAAAT AAATTTGCAA AGGGTAAAAA TAAAAATAAT CAAATAAGTT 221 AATCATTGGA AAACCGTAAG TTAACGGAGT GTTTTGGGTG CCTT--ACAC CTTCCTAAGA 34999 | || ||||| ||||||| | |||||||||| || || |||| |||| |||| |||||||||| AGTCGTTGGA AAACCGT-AT TTAACGGAGT GTCTTAGGTG CCTTAAACAC CTTCCTAAGA 280 TACTAATAGG AATCCCGAAC CCT-TAAAAT -GTTTCAAAA CAATTTTTTC TGTTTAAGTT 34941 |||||| | ||||||||| ||| ||||| |||||||| | | ||||| ||||||| || CGCTAATAAG AATCCCGAAT CCTAAAAAAT ATTTTCAAAA CGA-CTTTTC TGTTTAAATT 339 GTTTAGAAAC GAAGTTTTCT TGATTTTTCT TAAAAATTAA GTGGCGACTC CTAAAAGTCT 34881 |||| || | |||||||| |||||||||| |||||||||| |||||||||| || |||||| GTTTTGAGAA TGAGTTTTCT TGATTTTTCT TAAAAATTAA GTGGCGACTC CT-AAAGTC- 397 AAAAACAAAC TCTTTTCGAA AATCACCACC CTTTTTCGAT AAAACA 34835 |||| | || | || | || || || | ||||||| ||| || GAAAA-ATAC T-TTAAAATA AAACA-AACT C-TTTTCGAA AAATCA 439 hqPGS_C08HBa0235H18.1-_SGN-E368629+ (35186 34835) ******************************************************************************** EST sequence 343 -strand 449 n (File: SGN-E270562-) 1 TAAAATGTTT CAAAACAATT TTTCTGTTTA AGTTGTTTAG AAACGAAGTT TTCTTGATTT 61 TTCTTAAAAA TTAAGTGGCG ACTCCTAAAA GTCTAAAAAC AAACTCTTTT CGAAAATCAC 121 CTTTTTCGAT AAAACAATAG GCAATGAGTT CTCTTCTATT TTATTTTAAA GTTTAAATTT 181 AAGTTACTTA TTTATATTTT AATGTACGTT GAATTAATTA TTTATTTAGA GTTTAGTTAC 241 GTGATATACA TAATTTGAGA TTTTGTTCTT TATGATTAAA AAAAATTTTC ATCTAGAAGA 301 AAGTCTTGTG CTTCAATTTC TTTATACTGC AGTTTATAAC TTGTTTTCAA TAGCTATTAC 361 ATTATCCATC GATTGTTACA TTATATTCCA AAGGACTTAG ATGATAAAAA CAATTGCATA 421 TTGTGATTGT TTGCAACAAA AAAAAAAAA Predicted gene structure (within gDNA segment 35585 to 30974): Exon 1 34975 34835 ( 141 n); cDNA 1 136 ( 136 n); score: 0.965 PPA cDNA 435 449 MATCH C08HBa0235H18.1- SGN-E270562- 0.965 141 0.314 C PGS_C08HBa0235H18.1-_SGN-E270562- (34975 34835) Alignment (genomic DNA sequence = upper lines): TAAAATGTTT CAAAACAATT TTTTCTGTTT AAGTTGTTTA GAAACGAAGT TTTCTTGATT 34916 |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| TAAAATGTTT CAAAACAA-T TTTTCTGTTT AAGTTGTTTA GAAACGAAGT TTTCTTGATT 59 TTTCTTAAAA ATTAAGTGGC GACTCCTAAA AGTCTAAAAA CAAACTCTTT TCGAAAATCA 34856 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| TTTCTTAAAA ATTAAGTGGC GACTCCTAAA AGTCTAAAAA CAAACTCTTT TCGAAAAT-- 117 CCACCCTTTT TCGATAAAAC A 34835 || |||||| |||||||||| | -CA-CCTTTT TCGATAAAAC A 136 hqPGS_C08HBa0235H18.1-_SGN-E270562- (34975 34835) ******************************************************************************** EST sequence 1051 +strand 455 n (File: SGN-E238621+) 1 TTTGTTGACG TTTTTGTTTT AAATGTCGTT AGCTTAGGAT TAGAAGAATC CAAACCCCAT 61 CAAACGCCTT TTGCTTTATC AAACTCGAAA CTAAAAAATC GAAACTTTAA AGGCGTTCGA 121 ATTTGAAAGT CACTTAGAAT TAAAGTTCGA AAAGTTTTAA TGTTAACGGA ATCTTAAAAC 181 AATAAATGTT TCAAATTTAT AAAGTTTTCC TAGATATCTT AAGAAGTTCA AAATTCGCAA 241 GTCTTTAAAA CAAAATAGTC AAATAAGTTA ATCGTCGGAA AACTGTATTT AACGGAGTGT 301 CTTAGGTGCC TTACACCTTC TTAAGATACT AATAGGAATC TTGAACCCTT AAAATGTTTC 361 AAAACAATTT TTCTGTTTAA GTTGTTTAGA AACGAAGTTT TCTTGATTTT TCTTAAAAAT 421 TAAGTGGCGA CTCCTAAAAG TCTAAAAACA AACTC Predicted gene structure (within gDNA segment 38660 to 34259): Exon 1 35354 34869 ( 486 n); cDNA 5 455 ( 451 n); score: 0.777 MATCH C08HBa0235H18.1- SGN-E238621+ 0.777 486 1.068 C PGS_C08HBa0235H18.1-_SGN-E238621+ (35354 34869) Alignment (genomic DNA sequence = upper lines): TTATCTTATT TTGTTTTCAA TGCCGTTAGC TTAGGATTAG GAAACTCCAA ACCCTCATCG 35295 || | | || ||||||| || || ||||||| |||||||||| | | ||||| |||| |||| TTGACGT-TT TTGTTTTAAA TGTCGTTAGC TTAGGATTAG AAGAATCCAA ACCC-CATCA 62 AACGCCTGTT ATTTTATCAA ACCTAAAAAA TTTTAAAACT AACTTCTAAA TGATAAATTG 35235 ||||||| || |||||||| | || ||| ||||| || || ||| |||| AACGCCTTTT GCTTTATCAA A-CT-CGAAA --CTAAAA-- AA--TCGAAA CTTTAAAGGC 114 TTTCAAATTC GTAAGGCTTG TTTAGATAAA ACCTTGAGTA AGCTTAACTT TGAAATGGTT 35175 ||| |||| | ||| | | |||| | | || | | | || || | | ||| | GTTCGAATTT GAAAGTC-AC T-TAGAATTA AAGTT-CG-A A----AAGTT TTA-ATGTTA 165 TCGTAAACTG GCAAGATAAA CAATAAATAT TTCAAAATTG GCTAAGTTTG GCTAAGTAAG 35115 || | | | | | ||| |||||||| | ||||| ||| |||||| || || | ACGGA-A-T- -C-TTA-AAA CAATAAATGT TTCAA-ATTT ATAAAGTTTT CCT-AG-ATA 216 TCATGTTAAA AGTTCAAATA AATTTGCAAA GGTTAAAAAT AAAAATAATC AAAT-AGTTA 35056 || | | | | ||||| | | |||| |||| || |||| |||||| || |||| ||||| TC-T-TAAGA AGTTC--A-A AATTCGCAAG TCTTTAAAA- CAAAATAGTC AAATAAGTTA 270 ATCATTGGAA AACCGTAAGT TAACGGAGTG TTTTGGGTGC CTTACACCTT CCTAAGATAC 34996 ||| | |||| ||| || | | |||||||||| | || ||||| |||||||||| | |||||||| ATCGTCGGAA AACTGT-ATT TAACGGAGTG TCTTAGGTGC CTTACACCTT CTTAAGATAC 329 TAATAGGAAT CCCGAACCCT TAAAATGTTT CAAAACAATT TTTTCTGTTT AAGTTGTTTA 34936 |||||||||| | ||||||| |||||||||| |||||||| | |||||||||| |||||||||| TAATAGGAAT CTTGAACCCT TAAAATGTTT CAAAACAA-T TTTTCTGTTT AAGTTGTTTA 388 GAAACGAAGT TTTCTTGATT TTTCTTAAAA ATTAAGTGGC GACTCCTAAA AGTCTAAAAA 34876 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAACGAAGT TTTCTTGATT TTTCTTAAAA ATTAAGTGGC GACTCCTAAA AGTCTAAAAA 448 CAAACTC 34869 ||||||| CAAACTC 455 hqPGS_C08HBa0235H18.1-_SGN-E238621+ (35354 34869) ******************************************************************************** EST sequence 1015 +strand 358 n (File: SGN-E235901+) 1 ACGCCTTTTG CTTTATGAAA CTAAAAAATA AAAATTGAAG TTTTGAAACG ATAGAGGTTT 61 AAAATTTGAA AGTCTGCTTA GAGAGTTAAG GCTTAGAAAG TTTAACTAAG ACGGAATCTT 121 AAAAGATTAA TATCTCAAAT TTGCAAAGTT TGGCTAAGTA AATCGTGATA AAAGTTCAAA 181 TAAATTTGCA AAGGGTAAAA ATAAAAATAA TCAAATAAGT TAGTCGTTGG AAAACCGTAT 241 TTAACGGAGT GTCTTAGGTG CCTTAAACAC CTTCCTAAGA CGCTAATAAG AATCCCGAAT 301 CCTAAAAAAT ATTTTCAAAA CGACTTTTCT GTTTAAATTG TTTTGAGAAT GAGTTTTC Predicted gene structure (within gDNA segment 37181 to 33040): Exon 1 35475 35463 ( 13 n); cDNA 81 92 ( 12 n); score: 0.615 Intron 1 35462 35187 ( 276 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.64) Exon 2 35186 34922 ( 265 n); cDNA 93 358 ( 266 n); score: 0.783 MATCH C08HBa0235H18.1- SGN-E235901+ 0.783 278 0.777 C PGS_C08HBa0235H18.1-_SGN-E235901+ (35475 35463,35186 34922) Alignment (genomic DNA sequence = upper lines): GACAGGTACA GAAATGGGCT AAAAAACCCA AAGGCAGGTG GGTCCAACAT TCGGTCAAGG 35416 || || || | | GAGAGTTA-A GGC....... .......... .......... .......... .......... 92 ATAACAGAAC CCGGAGTTGG ACCCAAATCT CTCTCTCTCT ATCCTTCTCT TTACTATTTG 35356 .......... .......... .......... .......... .......... .......... 92 CTTATCTTAT TTTGTTTTCA ATGCCGTTAG CTTAGGATTA GGAAACTCCA AACCCTCATC 35296 .......... .......... .......... .......... .......... .......... 92 GAACGCCTGT TATTTTATCA AACCTAAAAA ATTTTAAAAC TAACTTCTAA ATGATAAATT 35236 .......... .......... .......... .......... .......... .......... 92 GTTTCAAATT CGTAAGGCTT GTTTAGATAA AACCTTGAGT AAGCTTAACT TTGAAATGGT 35176 | | |||| | | .......... .......... .......... .......... .........T TAGAAA-GTT 102 TTCGTAAACT GGCAAGATAA ACAATAAATA TTTCAAAATT GGCTAAGTTT GGCTAAGTAA 35116 | ||| || | ||| | || |||| | || ||||| || |||||| |||||||||| TAACTAAGAC GGAATCTTAA AAGATTAATA TCTC-AAATT TGCAAAGTTT GGCTAAGTAA 161 GTCATGTTAA AAGTTCAAAT AAATTTGCAA AGGTTAAAAA TAAAAATAAT CAAAT-AGTT 35057 || || ||| |||||||||| |||||||||| ||| |||||| |||||||||| ||||| |||| ATCGTGATAA AAGTTCAAAT AAATTTGCAA AGGGTAAAAA TAAAAATAAT CAAATAAGTT 221 AATCATTGGA AAACCGTAAG TTAACGGAGT GTTTTGGGTG CCTT--ACAC CTTCCTAAGA 34999 | || ||||| ||||||| | |||||||||| || || |||| |||| |||| |||||||||| AGTCGTTGGA AAACCGT-AT TTAACGGAGT GTCTTAGGTG CCTTAAACAC CTTCCTAAGA 280 TACTAATAGG AATCCCGAAC CCT-TAAAAT -GTTTCAAAA CAATTTTTTC TGTTTAAGTT 34941 |||||| | ||||||||| ||| ||||| |||||||| | | ||||| ||||||| || CGCTAATAAG AATCCCGAAT CCTAAAAAAT ATTTTCAAAA CGA-CTTTTC TGTTTAAATT 339 GTTTAGAAAC GAAGTTTTC 34922 |||| || | ||||||| GTTTTGAGAA TGAGTTTTC 358 hqPGS_C08HBa0235H18.1-_SGN-E235901+ (35186 34922) ******************************************************************************** EST sequence 547 -strand 567 n (File: SGN-E252885-) 1 ATTACGGTAG AGATCAGTTG ACTAATTGAG GCGATTTAAA ATGAAGAAAC TCAAATTCAC 61 TTGGCCACTT CATCAGTACT TGCAGGCATC TCCAAGGGGA AATTTGGATC AGCAACACCA 121 TTAGGACAAA AGACAACCCT ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA 181 GGATCGTCTT GTGGGTAGCT ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC 241 TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA 301 GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC 361 GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 421 ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 481 GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 541 CAATCACCAG TATGACATGT ACCTCTG Predicted gene structure (within gDNA segment 40249 to 45319): Exon 1 40947 40984 ( 38 n); cDNA 124 161 ( 38 n); score: 0.895 Intron 1 40985 43277 (2293 n); Pd: 0.925 (s: 0), Pa: 0.758 (s: 0.86) Exon 2 43278 43683 ( 406 n); cDNA 162 566 ( 405 n); score: 0.865 MATCH C08HBa0235H18.1+ SGN-E252885- 0.865 444 0.783 C PGS_C08HBa0235H18.1+_SGN-E252885- (40947 40984,43278 43683) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGG.. .......... .......... 161 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 .......... .......... .......... .......... .......... .......... 161 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 .......... .......... .......... .......... .......... .......... 161 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 .......... .......... .......... .......... .......... .......... 161 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 .......... .......... .......... .......... .......... .......... 161 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 .......... .......... .......... .......... .......... .......... 161 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 .......... .......... .......... .......... .......... .......... 161 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT ACGACCCCAT 41426 .......... .......... .......... .......... .......... .......... 161 ATACGTGCCA TCTTAGTGCC CCTCGGCGCA TTGATGACCC ATGTTTGGCC TCGATCGAGA 41486 .......... .......... .......... .......... .......... .......... 161 CGTCGACCAC CGCCTATCGG GGTCGATGCT GCCCAAACGG TGTAGGGACA ATTGTTGCGT 41546 .......... .......... .......... .......... .......... .......... 161 ACCTCGATAG TGGCAGCATA AGTGTAAGTC ACTAAAGCAA GGAAGAAGAA AATAAAAGAA 41606 .......... .......... .......... .......... .......... .......... 161 GATGTCAAGT AGCCCATGTT TGTGTACATA TTTTTGTTTA TTTTTGATAT ATAGTTACAT 41666 .......... .......... .......... .......... .......... .......... 161 ATTATTGGGT AGTTTATATA GGGGTGTGAC AACTTTTGGC ACCTTGCACA TTTAGAATTC 41726 .......... .......... .......... .......... .......... .......... 161 CACTATATAA GTTGTGGAAA TTTTTACCAT AAAGAATTAA ATGGATGGAA TGATCATATG 41786 .......... .......... .......... .......... .......... .......... 161 GAAAATTCCT CTAAAGGAGA AATTTACAAG CCACTTAAAT TGGAGGAGGA ATAGAGAAAG 41846 .......... .......... .......... .......... .......... .......... 161 TCATCACATG AAGTGATATT AATGACAATA TTATATAATT GTCTTTTAAT TTGTTAGCAA 41906 .......... .......... .......... .......... .......... .......... 161 CAATAAAAAA TTCATAGCTA ATTCCTAATC TGCAAAAATG ATTAATTCTT TATTTTCTAG 41966 .......... .......... .......... .......... .......... .......... 161 AGATTCAAAG TTAATTAATT ATAAAACTCT CCCAATGAAT TTAGAAAACA GGGAATGTTT 42026 .......... .......... .......... .......... .......... .......... 161 TTTGGTTCGT AGGCAAGAAA GTTTTTGGAA TTAAACACAA CAAAAATAAT CCTCATATCC 42086 .......... .......... .......... .......... .......... .......... 161 TATTTTTAAC TAATACTTTA ATGTGTCTAG ATTTTTATTA ATATGTCTGC TTTATATTAA 42146 .......... .......... .......... .......... .......... .......... 161 AATTTCATTT TTTTAAAAAA TAATAGGAAA ATTCTCAGAC CGTCCATAAA GAAAAATCAA 42206 .......... .......... .......... .......... .......... .......... 161 AATTAAATAG TTTCTTCTAT TCAAAATTAA GATGAGTTGT CACCATACTT TTAGAATTTT 42266 .......... .......... .......... .......... .......... .......... 161 TGATTTTTTT ATGCAAGAAT AAGACTTACG AGAACAAATG GTAATCAAAA TAAGATAGGA 42326 .......... .......... .......... .......... .......... .......... 161 AAAAGGGTCA AATTTCCTTT TTTTTTCGCC TAACTTATTT TATTAACTAA TTCATATTTA 42386 .......... .......... .......... .......... .......... .......... 161 GTTGTGTCTA AAACAGGTTT AACTGATAAA GGTTAAATAA AAAAAAATGT TACTACTGTG 42446 .......... .......... .......... .......... .......... .......... 161 TTGATTTATC AATTTTGGGT TATTGAATTA ACCGTCTTAG AATATTAGTT CAGCTTCCAA 42506 .......... .......... .......... .......... .......... .......... 161 TTTTAAAATT TTAGTTAATG ATTAAATCAA TAACCTAATA AAATTATATT AAAACTACTT 42566 .......... .......... .......... .......... .......... .......... 161 TTTTTTATTT TTATTTCTAT TTATATAATA ATGACTTTAT TTAAACTTCA AATACAAAAC 42626 .......... .......... .......... .......... .......... .......... 161 CTATTTTCTT TTGCATTTTA TAATCAATGT ATTGATGCTG ATGTGTTTTG TGCACTTGTT 42686 .......... .......... .......... .......... .......... .......... 161 AAAGTTGTGT TATTATATTA TTTTAATATT AATATAATAA ATGAAGCAGT GTTTTTGCTT 42746 .......... .......... .......... .......... .......... .......... 161 GTAAATTTCT AGATTTCTAT TTATGAAGTT CTGACTTAAA CGTATCTAAC GAATAATTAA 42806 .......... .......... .......... .......... .......... .......... 161 ATAAAAAATC AAGTATTTAA GGATCGATAG TTGATTATCT AAATTATTGA TCATTGATTT 42866 .......... .......... .......... .......... .......... .......... 161 AGCATGTTTA TAAATAAAAA ATCGATAAAC TAAACCACAA AATCTAACCA GTAAACATTG 42926 .......... .......... .......... .......... .......... .......... 161 AGACCATATC GAATACACCT ACAAGTAATT CATTAATAAG TTTCAAATTC AATATACAAC 42986 .......... .......... .......... .......... .......... .......... 161 AACAAAAAAA AAAGGCAAGA AAATGTTGAA GTAAAGTAAA TAACGACACA CGATTATTAA 43046 .......... .......... .......... .......... .......... .......... 161 AGATATTATT ATTTGTTCAT CAATGATCAA AATATATAAG TTGAAGGGAG TGTGTATACA 43106 .......... .......... .......... .......... .......... .......... 161 TTACACAAAT AAGATATTAT TATCTCACCC AACATAAATA GTTTAACAAA CCTTTTAAGA 43166 .......... .......... .......... .......... .......... .......... 161 TACTTATTGT TTTGGTAATT TTTCATACCA TATAATTTGT AGCAAAATAT GCTTTATATT 43226 .......... .......... .......... .......... .......... .......... 161 GTGGCATTAA TTATGGGCAA AAAACAACCT TATAATTTGT ACTATCACTA GGGCAAGCAA 43286 ||||| || .......... .......... .......... .......... .......... .-GCAAGTAA 169 ATGTGCTAGT AGCATCATCT TGTGGGTAGC TATAGGCATC AGGGCATCTC TGTTTGAAAA 43346 ||||||| || || ||| ||| |||||||||| |||| ||||| || ||||| | ||||||| ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA 229 ATTTCGACCA CTCAGTAGGA CTACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 43406 |||| ||| | ||| ||||| | |||||||| |||||||||| |||||||||| |||||||||| ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 289 ACGTGGTACA AGGATTGTTA CATCCTCCGG TTACTTTAAG TTGACTAGGG CATTCACCGT 43466 |||||||||| ||| |||||| |||||||| | ||| ||||| | ||| |||||||| | ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT 349 TTATATTGGC GGTGCATTGA ATTGAGTGGC ATTTTCCTCC ACTGGAATTG GTTGTGGCGA 43526 |||||||||| ||||| ||| |||| ||| | |||||||||| ||| | || |||| ||| | TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA 409 AAGTCATCGG TATATTAAAT CCATCGACTA AAGAAATGTC CCAGAAATCT AGGTTGTTAA 43586 ||||||| || ||||||||| |||||||||| |||||||||| ||| |||||| | |||| ||| AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA 469 ACTGGTTCAA GGCGTATTCG GTCAAGGTGT TTGGCGGTTT ACCCCACCCG GTACACTGCA 43646 |||||| ||| |||||| ||| | | ||||| |||| ||||| ||||| ||| |||||||| | ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA 529 AGACTCCACC ACAATCACCA GTCTCACAAG AACCTCT 43683 |||||||||| |||||||||| || | ||| | |||||| AGACTCCACC ACAATCACCA GTATGACATG TACCTCT 566 hqPGS_C08HBa0235H18.1+_SGN-E252885- (40947 40984,43278 43683) ******************************************************************************** EST sequence 947 -strand 703 n (File: SGN-E274671-) 1 TTTTTTTTNT CAAATGCACT GTTGTTTTAT ACATCTAAGA CAAAAGTACA CATGAGATGT 61 AACTCTTATT CCGGTCTTTA AGTTTGTTAC GAACTCTTAT CAATAAAGTA AAAGTGAATA 121 TTTAAAAAAC TGAGCTATTA AGATTTTTCA TTACGGTAGA GATCAGTTGA CTAATTGAGG 181 CGATTTAAAA TGAAGAAACT CAAATTCACT TGGCCACTTC ATCAGTACTT GCAGGCATCT 241 CCAAGGGGAA ATTTGGATCA GCAACACCAT TAGGACAAAA GACAACCCTA TAGTTTGTAC 301 TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA TAAGCATCGG 361 GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT TGGGTGCAAC 421 AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACCTTAAGGG 481 CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC 541 TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC 601 AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC 661 CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTG Predicted gene structure (within gDNA segment 38759 to 45189): Exon 1 40947 40984 ( 38 n); cDNA 273 310 ( 38 n); score: 0.895 Intron 1 40985 43277 (2293 n); Pd: 0.925 (s: 0), Pa: 0.758 (s: 0.86) Exon 2 43278 43670 ( 393 n); cDNA 311 702 ( 392 n); score: 0.870 MATCH C08HBa0235H18.1+ SGN-E274671- 0.870 431 0.613 C PGS_C08HBa0235H18.1+_SGN-E274671- (40947 40984,43278 43670) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGG.. .......... .......... 310 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 .......... .......... .......... .......... .......... .......... 310 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 .......... .......... .......... .......... .......... .......... 310 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 .......... .......... .......... .......... .......... .......... 310 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 .......... .......... .......... .......... .......... .......... 310 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 .......... .......... .......... .......... .......... .......... 310 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 .......... .......... .......... .......... .......... .......... 310 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT ACGACCCCAT 41426 .......... .......... .......... .......... .......... .......... 310 ATACGTGCCA TCTTAGTGCC CCTCGGCGCA TTGATGACCC ATGTTTGGCC TCGATCGAGA 41486 .......... .......... .......... .......... .......... .......... 310 CGTCGACCAC CGCCTATCGG GGTCGATGCT GCCCAAACGG TGTAGGGACA ATTGTTGCGT 41546 .......... .......... .......... .......... .......... .......... 310 ACCTCGATAG TGGCAGCATA AGTGTAAGTC ACTAAAGCAA GGAAGAAGAA AATAAAAGAA 41606 .......... .......... .......... .......... .......... .......... 310 GATGTCAAGT AGCCCATGTT TGTGTACATA TTTTTGTTTA TTTTTGATAT ATAGTTACAT 41666 .......... .......... .......... .......... .......... .......... 310 ATTATTGGGT AGTTTATATA GGGGTGTGAC AACTTTTGGC ACCTTGCACA TTTAGAATTC 41726 .......... .......... .......... .......... .......... .......... 310 CACTATATAA GTTGTGGAAA TTTTTACCAT AAAGAATTAA ATGGATGGAA TGATCATATG 41786 .......... .......... .......... .......... .......... .......... 310 GAAAATTCCT CTAAAGGAGA AATTTACAAG CCACTTAAAT TGGAGGAGGA ATAGAGAAAG 41846 .......... .......... .......... .......... .......... .......... 310 TCATCACATG AAGTGATATT AATGACAATA TTATATAATT GTCTTTTAAT TTGTTAGCAA 41906 .......... .......... .......... .......... .......... .......... 310 CAATAAAAAA TTCATAGCTA ATTCCTAATC TGCAAAAATG ATTAATTCTT TATTTTCTAG 41966 .......... .......... .......... .......... .......... .......... 310 AGATTCAAAG TTAATTAATT ATAAAACTCT CCCAATGAAT TTAGAAAACA GGGAATGTTT 42026 .......... .......... .......... .......... .......... .......... 310 TTTGGTTCGT AGGCAAGAAA GTTTTTGGAA TTAAACACAA CAAAAATAAT CCTCATATCC 42086 .......... .......... .......... .......... .......... .......... 310 TATTTTTAAC TAATACTTTA ATGTGTCTAG ATTTTTATTA ATATGTCTGC TTTATATTAA 42146 .......... .......... .......... .......... .......... .......... 310 AATTTCATTT TTTTAAAAAA TAATAGGAAA ATTCTCAGAC CGTCCATAAA GAAAAATCAA 42206 .......... .......... .......... .......... .......... .......... 310 AATTAAATAG TTTCTTCTAT TCAAAATTAA GATGAGTTGT CACCATACTT TTAGAATTTT 42266 .......... .......... .......... .......... .......... .......... 310 TGATTTTTTT ATGCAAGAAT AAGACTTACG AGAACAAATG GTAATCAAAA TAAGATAGGA 42326 .......... .......... .......... .......... .......... .......... 310 AAAAGGGTCA AATTTCCTTT TTTTTTCGCC TAACTTATTT TATTAACTAA TTCATATTTA 42386 .......... .......... .......... .......... .......... .......... 310 GTTGTGTCTA AAACAGGTTT AACTGATAAA GGTTAAATAA AAAAAAATGT TACTACTGTG 42446 .......... .......... .......... .......... .......... .......... 310 TTGATTTATC AATTTTGGGT TATTGAATTA ACCGTCTTAG AATATTAGTT CAGCTTCCAA 42506 .......... .......... .......... .......... .......... .......... 310 TTTTAAAATT TTAGTTAATG ATTAAATCAA TAACCTAATA AAATTATATT AAAACTACTT 42566 .......... .......... .......... .......... .......... .......... 310 TTTTTTATTT TTATTTCTAT TTATATAATA ATGACTTTAT TTAAACTTCA AATACAAAAC 42626 .......... .......... .......... .......... .......... .......... 310 CTATTTTCTT TTGCATTTTA TAATCAATGT ATTGATGCTG ATGTGTTTTG TGCACTTGTT 42686 .......... .......... .......... .......... .......... .......... 310 AAAGTTGTGT TATTATATTA TTTTAATATT AATATAATAA ATGAAGCAGT GTTTTTGCTT 42746 .......... .......... .......... .......... .......... .......... 310 GTAAATTTCT AGATTTCTAT TTATGAAGTT CTGACTTAAA CGTATCTAAC GAATAATTAA 42806 .......... .......... .......... .......... .......... .......... 310 ATAAAAAATC AAGTATTTAA GGATCGATAG TTGATTATCT AAATTATTGA TCATTGATTT 42866 .......... .......... .......... .......... .......... .......... 310 AGCATGTTTA TAAATAAAAA ATCGATAAAC TAAACCACAA AATCTAACCA GTAAACATTG 42926 .......... .......... .......... .......... .......... .......... 310 AGACCATATC GAATACACCT ACAAGTAATT CATTAATAAG TTTCAAATTC AATATACAAC 42986 .......... .......... .......... .......... .......... .......... 310 AACAAAAAAA AAAGGCAAGA AAATGTTGAA GTAAAGTAAA TAACGACACA CGATTATTAA 43046 .......... .......... .......... .......... .......... .......... 310 AGATATTATT ATTTGTTCAT CAATGATCAA AATATATAAG TTGAAGGGAG TGTGTATACA 43106 .......... .......... .......... .......... .......... .......... 310 TTACACAAAT AAGATATTAT TATCTCACCC AACATAAATA GTTTAACAAA CCTTTTAAGA 43166 .......... .......... .......... .......... .......... .......... 310 TACTTATTGT TTTGGTAATT TTTCATACCA TATAATTTGT AGCAAAATAT GCTTTATATT 43226 .......... .......... .......... .......... .......... .......... 310 GTGGCATTAA TTATGGGCAA AAAACAACCT TATAATTTGT ACTATCACTA GGGCAAGCAA 43286 ||||| || .......... .......... .......... .......... .......... .-GCAAGTAA 318 ATGTGCTAGT AGCATCATCT TGTGGGTAGC TATAGGCATC AGGGCATCTC TGTTTGAAAA 43346 ||||||| || || ||| ||| |||||||||| |||| ||||| || ||||| | ||||||| ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA 378 ATTTCGACCA CTCAGTAGGA CTACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 43406 |||| ||| | ||| ||||| | |||||||| |||||||||| |||||||||| |||||||||| ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 438 ACGTGGTACA AGGATTGTTA CATCCTCCGG TTACTTTAAG TTGACTAGGG CATTCACCGT 43466 |||||||||| ||| |||||| |||||||| | ||| ||||| | ||| |||||||| | ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT 498 TTATATTGGC GGTGCATTGA ATTGAGTGGC ATTTTCCTCC ACTGGAATTG GTTGTGGCGA 43526 |||||||||| ||||| ||| |||| ||| | |||||||||| ||| | || |||| ||| | TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA 558 AAGTCATCGG TATATTAAAT CCATCGACTA AAGAAATGTC CCAGAAATCT AGGTTGTTAA 43586 ||||||| || ||||||||| |||||||||| |||||||||| ||| |||||| | |||| ||| AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA 618 ACTGGTTCAA GGCGTATTCG GTCAAGGTGT TTGGCGGTTT ACCCCACCCG GTACACTGCA 43646 |||||| ||| |||||| ||| | | ||||| |||| ||||| ||||| ||| |||||||| | ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA 678 AGACTCCACC ACAATCACCA GTCT 43670 |||||||||| |||||||||| |||| AGACTCCACC ACAATCACCA GTCT 702 hqPGS_C08HBa0235H18.1+_SGN-E274671- (40947 40984,43278 43670) ******************************************************************************** EST sequence 966 -strand 652 n (File: SGN-E276802-) 1 ATGAGATGTA ACTCTTATTC CGGTCTTTAA GTTTGTTACG AACTCTTATC AATAAAGTAA 61 AAGTGAATAT TTAAAAAACT GAGCTATTAA GATTTTTCAT TACGGTAGAG ATCAGTTGAC 121 TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT GGCCACTTCA TCAGTACTTG 181 CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG ACAACCCTAT 241 AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT 301 AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 361 GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 421 CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 481 TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 541 AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 601 GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TG Predicted gene structure (within gDNA segment 39269 to 45189): Exon 1 40947 40984 ( 38 n); cDNA 222 259 ( 38 n); score: 0.895 Intron 1 40985 43277 (2293 n); Pd: 0.925 (s: 0), Pa: 0.758 (s: 0.86) Exon 2 43278 43670 ( 393 n); cDNA 260 651 ( 392 n); score: 0.870 MATCH C08HBa0235H18.1+ SGN-E276802- 0.870 431 0.661 C PGS_C08HBa0235H18.1+_SGN-E276802- (40947 40984,43278 43670) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGG.. .......... .......... 259 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 .......... .......... .......... .......... .......... .......... 259 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 .......... .......... .......... .......... .......... .......... 259 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 .......... .......... .......... .......... .......... .......... 259 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 .......... .......... .......... .......... .......... .......... 259 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 .......... .......... .......... .......... .......... .......... 259 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 .......... .......... .......... .......... .......... .......... 259 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT ACGACCCCAT 41426 .......... .......... .......... .......... .......... .......... 259 ATACGTGCCA TCTTAGTGCC CCTCGGCGCA TTGATGACCC ATGTTTGGCC TCGATCGAGA 41486 .......... .......... .......... .......... .......... .......... 259 CGTCGACCAC CGCCTATCGG GGTCGATGCT GCCCAAACGG TGTAGGGACA ATTGTTGCGT 41546 .......... .......... .......... .......... .......... .......... 259 ACCTCGATAG TGGCAGCATA AGTGTAAGTC ACTAAAGCAA GGAAGAAGAA AATAAAAGAA 41606 .......... .......... .......... .......... .......... .......... 259 GATGTCAAGT AGCCCATGTT TGTGTACATA TTTTTGTTTA TTTTTGATAT ATAGTTACAT 41666 .......... .......... .......... .......... .......... .......... 259 ATTATTGGGT AGTTTATATA GGGGTGTGAC AACTTTTGGC ACCTTGCACA TTTAGAATTC 41726 .......... .......... .......... .......... .......... .......... 259 CACTATATAA GTTGTGGAAA TTTTTACCAT AAAGAATTAA ATGGATGGAA TGATCATATG 41786 .......... .......... .......... .......... .......... .......... 259 GAAAATTCCT CTAAAGGAGA AATTTACAAG CCACTTAAAT TGGAGGAGGA ATAGAGAAAG 41846 .......... .......... .......... .......... .......... .......... 259 TCATCACATG AAGTGATATT AATGACAATA TTATATAATT GTCTTTTAAT TTGTTAGCAA 41906 .......... .......... .......... .......... .......... .......... 259 CAATAAAAAA TTCATAGCTA ATTCCTAATC TGCAAAAATG ATTAATTCTT TATTTTCTAG 41966 .......... .......... .......... .......... .......... .......... 259 AGATTCAAAG TTAATTAATT ATAAAACTCT CCCAATGAAT TTAGAAAACA GGGAATGTTT 42026 .......... .......... .......... .......... .......... .......... 259 TTTGGTTCGT AGGCAAGAAA GTTTTTGGAA TTAAACACAA CAAAAATAAT CCTCATATCC 42086 .......... .......... .......... .......... .......... .......... 259 TATTTTTAAC TAATACTTTA ATGTGTCTAG ATTTTTATTA ATATGTCTGC TTTATATTAA 42146 .......... .......... .......... .......... .......... .......... 259 AATTTCATTT TTTTAAAAAA TAATAGGAAA ATTCTCAGAC CGTCCATAAA GAAAAATCAA 42206 .......... .......... .......... .......... .......... .......... 259 AATTAAATAG TTTCTTCTAT TCAAAATTAA GATGAGTTGT CACCATACTT TTAGAATTTT 42266 .......... .......... .......... .......... .......... .......... 259 TGATTTTTTT ATGCAAGAAT AAGACTTACG AGAACAAATG GTAATCAAAA TAAGATAGGA 42326 .......... .......... .......... .......... .......... .......... 259 AAAAGGGTCA AATTTCCTTT TTTTTTCGCC TAACTTATTT TATTAACTAA TTCATATTTA 42386 .......... .......... .......... .......... .......... .......... 259 GTTGTGTCTA AAACAGGTTT AACTGATAAA GGTTAAATAA AAAAAAATGT TACTACTGTG 42446 .......... .......... .......... .......... .......... .......... 259 TTGATTTATC AATTTTGGGT TATTGAATTA ACCGTCTTAG AATATTAGTT CAGCTTCCAA 42506 .......... .......... .......... .......... .......... .......... 259 TTTTAAAATT TTAGTTAATG ATTAAATCAA TAACCTAATA AAATTATATT AAAACTACTT 42566 .......... .......... .......... .......... .......... .......... 259 TTTTTTATTT TTATTTCTAT TTATATAATA ATGACTTTAT TTAAACTTCA AATACAAAAC 42626 .......... .......... .......... .......... .......... .......... 259 CTATTTTCTT TTGCATTTTA TAATCAATGT ATTGATGCTG ATGTGTTTTG TGCACTTGTT 42686 .......... .......... .......... .......... .......... .......... 259 AAAGTTGTGT TATTATATTA TTTTAATATT AATATAATAA ATGAAGCAGT GTTTTTGCTT 42746 .......... .......... .......... .......... .......... .......... 259 GTAAATTTCT AGATTTCTAT TTATGAAGTT CTGACTTAAA CGTATCTAAC GAATAATTAA 42806 .......... .......... .......... .......... .......... .......... 259 ATAAAAAATC AAGTATTTAA GGATCGATAG TTGATTATCT AAATTATTGA TCATTGATTT 42866 .......... .......... .......... .......... .......... .......... 259 AGCATGTTTA TAAATAAAAA ATCGATAAAC TAAACCACAA AATCTAACCA GTAAACATTG 42926 .......... .......... .......... .......... .......... .......... 259 AGACCATATC GAATACACCT ACAAGTAATT CATTAATAAG TTTCAAATTC AATATACAAC 42986 .......... .......... .......... .......... .......... .......... 259 AACAAAAAAA AAAGGCAAGA AAATGTTGAA GTAAAGTAAA TAACGACACA CGATTATTAA 43046 .......... .......... .......... .......... .......... .......... 259 AGATATTATT ATTTGTTCAT CAATGATCAA AATATATAAG TTGAAGGGAG TGTGTATACA 43106 .......... .......... .......... .......... .......... .......... 259 TTACACAAAT AAGATATTAT TATCTCACCC AACATAAATA GTTTAACAAA CCTTTTAAGA 43166 .......... .......... .......... .......... .......... .......... 259 TACTTATTGT TTTGGTAATT TTTCATACCA TATAATTTGT AGCAAAATAT GCTTTATATT 43226 .......... .......... .......... .......... .......... .......... 259 GTGGCATTAA TTATGGGCAA AAAACAACCT TATAATTTGT ACTATCACTA GGGCAAGCAA 43286 ||||| || .......... .......... .......... .......... .......... .-GCAAGTAA 267 ATGTGCTAGT AGCATCATCT TGTGGGTAGC TATAGGCATC AGGGCATCTC TGTTTGAAAA 43346 ||||||| || || ||| ||| |||||||||| |||| ||||| || ||||| | ||||||| ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA 327 ATTTCGACCA CTCAGTAGGA CTACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 43406 |||| ||| | ||| ||||| | |||||||| |||||||||| |||||||||| |||||||||| ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 387 ACGTGGTACA AGGATTGTTA CATCCTCCGG TTACTTTAAG TTGACTAGGG CATTCACCGT 43466 |||||||||| ||| |||||| |||||||| | ||| ||||| | ||| |||||||| | ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT 447 TTATATTGGC GGTGCATTGA ATTGAGTGGC ATTTTCCTCC ACTGGAATTG GTTGTGGCGA 43526 |||||||||| ||||| ||| |||| ||| | |||||||||| ||| | || |||| ||| | TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA 507 AAGTCATCGG TATATTAAAT CCATCGACTA AAGAAATGTC CCAGAAATCT AGGTTGTTAA 43586 ||||||| || ||||||||| |||||||||| |||||||||| ||| |||||| | |||| ||| AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA 567 ACTGGTTCAA GGCGTATTCG GTCAAGGTGT TTGGCGGTTT ACCCCACCCG GTACACTGCA 43646 |||||| ||| |||||| ||| | | ||||| |||| ||||| ||||| ||| |||||||| | ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA 627 AGACTCCACC ACAATCACCA GTCT 43670 |||||||||| |||||||||| |||| AGACTCCACC ACAATCACCA GTCT 651 hqPGS_C08HBa0235H18.1+_SGN-E276802- (40947 40984,43278 43670) ******************************************************************************** EST sequence 1096 -strand 533 n (File: SGN-E209133-) 1 GGTAGAGATC AGTTGACTAA TTGAGGCGAT TTAAAATGAA GAAACTCAAA TTCACTTGGC 61 CACTTCATCA GTACTTGCAG GCATCTCCAA GGGGAAATTT GGATCAGCAA CACCATTAGG 121 ACAAAAGACA ACCCTATAGT TTGTACTACC ACCAGGGCAA GTAAATGTGC TTGTAGGATC 181 GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG AAAAATTTGG ACAACTCTGT 241 AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT CCAAACGTGG TACAAGGGTT 301 GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA 361 ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG GCAAAAGTCA TGGAATATTA 421 AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGCGTAC 481 TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC ACC Predicted gene structure (within gDNA segment 40299 to 45039): Exon 1 40947 40984 ( 38 n); cDNA 119 156 ( 38 n); score: 0.895 Intron 1 40985 43277 (2293 n); Pd: 0.925 (s: 0), Pa: 0.758 (s: 0.86) Exon 2 43278 43656 ( 379 n); cDNA 157 533 ( 377 n); score: 0.865 MATCH C08HBa0235H18.1+ SGN-E209133- 0.865 417 0.782 C PGS_C08HBa0235H18.1+_SGN-E209133- (40947 40984,43278 43656) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGG.. .......... .......... 156 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 .......... .......... .......... .......... .......... .......... 156 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 .......... .......... .......... .......... .......... .......... 156 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 .......... .......... .......... .......... .......... .......... 156 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 .......... .......... .......... .......... .......... .......... 156 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 .......... .......... .......... .......... .......... .......... 156 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 .......... .......... .......... .......... .......... .......... 156 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT ACGACCCCAT 41426 .......... .......... .......... .......... .......... .......... 156 ATACGTGCCA TCTTAGTGCC CCTCGGCGCA TTGATGACCC ATGTTTGGCC TCGATCGAGA 41486 .......... .......... .......... .......... .......... .......... 156 CGTCGACCAC CGCCTATCGG GGTCGATGCT GCCCAAACGG TGTAGGGACA ATTGTTGCGT 41546 .......... .......... .......... .......... .......... .......... 156 ACCTCGATAG TGGCAGCATA AGTGTAAGTC ACTAAAGCAA GGAAGAAGAA AATAAAAGAA 41606 .......... .......... .......... .......... .......... .......... 156 GATGTCAAGT AGCCCATGTT TGTGTACATA TTTTTGTTTA TTTTTGATAT ATAGTTACAT 41666 .......... .......... .......... .......... .......... .......... 156 ATTATTGGGT AGTTTATATA GGGGTGTGAC AACTTTTGGC ACCTTGCACA TTTAGAATTC 41726 .......... .......... .......... .......... .......... .......... 156 CACTATATAA GTTGTGGAAA TTTTTACCAT AAAGAATTAA ATGGATGGAA TGATCATATG 41786 .......... .......... .......... .......... .......... .......... 156 GAAAATTCCT CTAAAGGAGA AATTTACAAG CCACTTAAAT TGGAGGAGGA ATAGAGAAAG 41846 .......... .......... .......... .......... .......... .......... 156 TCATCACATG AAGTGATATT AATGACAATA TTATATAATT GTCTTTTAAT TTGTTAGCAA 41906 .......... .......... .......... .......... .......... .......... 156 CAATAAAAAA TTCATAGCTA ATTCCTAATC TGCAAAAATG ATTAATTCTT TATTTTCTAG 41966 .......... .......... .......... .......... .......... .......... 156 AGATTCAAAG TTAATTAATT ATAAAACTCT CCCAATGAAT TTAGAAAACA GGGAATGTTT 42026 .......... .......... .......... .......... .......... .......... 156 TTTGGTTCGT AGGCAAGAAA GTTTTTGGAA TTAAACACAA CAAAAATAAT CCTCATATCC 42086 .......... .......... .......... .......... .......... .......... 156 TATTTTTAAC TAATACTTTA ATGTGTCTAG ATTTTTATTA ATATGTCTGC TTTATATTAA 42146 .......... .......... .......... .......... .......... .......... 156 AATTTCATTT TTTTAAAAAA TAATAGGAAA ATTCTCAGAC CGTCCATAAA GAAAAATCAA 42206 .......... .......... .......... .......... .......... .......... 156 AATTAAATAG TTTCTTCTAT TCAAAATTAA GATGAGTTGT CACCATACTT TTAGAATTTT 42266 .......... .......... .......... .......... .......... .......... 156 TGATTTTTTT ATGCAAGAAT AAGACTTACG AGAACAAATG GTAATCAAAA TAAGATAGGA 42326 .......... .......... .......... .......... .......... .......... 156 AAAAGGGTCA AATTTCCTTT TTTTTTCGCC TAACTTATTT TATTAACTAA TTCATATTTA 42386 .......... .......... .......... .......... .......... .......... 156 GTTGTGTCTA AAACAGGTTT AACTGATAAA GGTTAAATAA AAAAAAATGT TACTACTGTG 42446 .......... .......... .......... .......... .......... .......... 156 TTGATTTATC AATTTTGGGT TATTGAATTA ACCGTCTTAG AATATTAGTT CAGCTTCCAA 42506 .......... .......... .......... .......... .......... .......... 156 TTTTAAAATT TTAGTTAATG ATTAAATCAA TAACCTAATA AAATTATATT AAAACTACTT 42566 .......... .......... .......... .......... .......... .......... 156 TTTTTTATTT TTATTTCTAT TTATATAATA ATGACTTTAT TTAAACTTCA AATACAAAAC 42626 .......... .......... .......... .......... .......... .......... 156 CTATTTTCTT TTGCATTTTA TAATCAATGT ATTGATGCTG ATGTGTTTTG TGCACTTGTT 42686 .......... .......... .......... .......... .......... .......... 156 AAAGTTGTGT TATTATATTA TTTTAATATT AATATAATAA ATGAAGCAGT GTTTTTGCTT 42746 .......... .......... .......... .......... .......... .......... 156 GTAAATTTCT AGATTTCTAT TTATGAAGTT CTGACTTAAA CGTATCTAAC GAATAATTAA 42806 .......... .......... .......... .......... .......... .......... 156 ATAAAAAATC AAGTATTTAA GGATCGATAG TTGATTATCT AAATTATTGA TCATTGATTT 42866 .......... .......... .......... .......... .......... .......... 156 AGCATGTTTA TAAATAAAAA ATCGATAAAC TAAACCACAA AATCTAACCA GTAAACATTG 42926 .......... .......... .......... .......... .......... .......... 156 AGACCATATC GAATACACCT ACAAGTAATT CATTAATAAG TTTCAAATTC AATATACAAC 42986 .......... .......... .......... .......... .......... .......... 156 AACAAAAAAA AAAGGCAAGA AAATGTTGAA GTAAAGTAAA TAACGACACA CGATTATTAA 43046 .......... .......... .......... .......... .......... .......... 156 AGATATTATT ATTTGTTCAT CAATGATCAA AATATATAAG TTGAAGGGAG TGTGTATACA 43106 .......... .......... .......... .......... .......... .......... 156 TTACACAAAT AAGATATTAT TATCTCACCC AACATAAATA GTTTAACAAA CCTTTTAAGA 43166 .......... .......... .......... .......... .......... .......... 156 TACTTATTGT TTTGGTAATT TTTCATACCA TATAATTTGT AGCAAAATAT GCTTTATATT 43226 .......... .......... .......... .......... .......... .......... 156 GTGGCATTAA TTATGGGCAA AAAACAACCT TATAATTTGT ACTATCACTA GGGCAAGCAA 43286 ||||| || .......... .......... .......... .......... .......... .-GCAAGTAA 164 ATGTGCTAGT AGCATCATCT TGTGGGTAGC TATAGGCATC AGGGCATCTC TGTTTGAAAA 43346 ||||||| || || ||| ||| |||||||||| |||| ||||| || ||||| | ||||||| ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA 224 ATTTCGACCA CTCAGTAGGA CTACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 43406 |||| ||| | ||| ||||| | |||||||| |||||||||| |||||||||| |||||||||| ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 284 ACGTGGTACA AGGATTGTTA CATCCTCCGG TTACTTTAAG TTGACTAGGG CATTCACCGT 43466 |||||||||| ||| |||||| |||||||| | ||| ||||| | ||| |||||||| | ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT 344 TTATATTGGC GGTGCATTGA ATTGAGTGGC ATTTTCCTCC ACTGGAATTG GTTGTGGCGA 43526 |||||||||| ||||| ||| |||| ||| | |||||||||| ||| | || |||| ||| | TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA 404 AAGTCATCGG TATATTAAAT CCATCGACTA AAGAAATGTC CCAGAAATCT AGGTTGTTAA 43586 ||||||| || ||||||||| |||||||||| |||||||||| ||| |||||| | |||| ||| AAGTCAT-GG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA 463 ACTGGTTCAA GGCGTATTCG GTCAAGGTGT TTGGCGGTTT ACCCCACCCG GTACACTGCA 43646 |||||| ||| |||||| ||| | | ||||| |||| ||||| ||||| ||| |||||||| | ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA 523 AGACTCCACC 43656 |||||||||| AGACTCCACC 533 hqPGS_C08HBa0235H18.1+_SGN-E209133- (40947 40984,43278 43656) ******************************************************************************** EST sequence 78 +strand 606 n (File: SGN-E263405+) 1 TTTTTTTTTT TTTTTTTACA CATGAGATGT AACTCTTATT CCGGTCTTTA AGTTTGTTAC 61 GAACTCTTAT CAATAAAGTA AAAGTGAATA TTTAAAAAAC TGAGCTATTA AGATTTTTCA 121 TTACGGTAGA GATCAGTTGA CTAATTGAGG CGATTTAAAA TGAAGAAACT CAAATTCACT 181 TGGCCACTTC ATCAGTACTT GCAGGCATCT CCAAGGGGAA ATTTGGATCA GCAACACCAT 241 TAGGACAAAA GACAACCCTA TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG 301 GATCGTCTTG TGGGTAGCTA TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT 361 CTGTAGGGCC ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG 421 GGTTGTTACA TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG 481 TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 541 TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 601 CGTACT Predicted gene structure (within gDNA segment 39069 to 44529): Exon 1 40947 40984 ( 38 n); cDNA 243 280 ( 38 n); score: 0.895 Intron 1 40985 43277 (2293 n); Pd: 0.925 (s: 0), Pa: 0.758 (s: 0.86) Exon 2 43278 43602 ( 325 n); cDNA 281 604 ( 324 n); score: 0.868 PPA cDNA 17 1 MATCH C08HBa0235H18.1+ SGN-E263405+ 0.868 363 0.599 C PGS_C08HBa0235H18.1+_SGN-E263405+ (40947 40984,43278 43602) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGG.. .......... .......... 280 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 .......... .......... .......... .......... .......... .......... 280 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 .......... .......... .......... .......... .......... .......... 280 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 .......... .......... .......... .......... .......... .......... 280 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 .......... .......... .......... .......... .......... .......... 280 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 .......... .......... .......... .......... .......... .......... 280 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 .......... .......... .......... .......... .......... .......... 280 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT ACGACCCCAT 41426 .......... .......... .......... .......... .......... .......... 280 ATACGTGCCA TCTTAGTGCC CCTCGGCGCA TTGATGACCC ATGTTTGGCC TCGATCGAGA 41486 .......... .......... .......... .......... .......... .......... 280 CGTCGACCAC CGCCTATCGG GGTCGATGCT GCCCAAACGG TGTAGGGACA ATTGTTGCGT 41546 .......... .......... .......... .......... .......... .......... 280 ACCTCGATAG TGGCAGCATA AGTGTAAGTC ACTAAAGCAA GGAAGAAGAA AATAAAAGAA 41606 .......... .......... .......... .......... .......... .......... 280 GATGTCAAGT AGCCCATGTT TGTGTACATA TTTTTGTTTA TTTTTGATAT ATAGTTACAT 41666 .......... .......... .......... .......... .......... .......... 280 ATTATTGGGT AGTTTATATA GGGGTGTGAC AACTTTTGGC ACCTTGCACA TTTAGAATTC 41726 .......... .......... .......... .......... .......... .......... 280 CACTATATAA GTTGTGGAAA TTTTTACCAT AAAGAATTAA ATGGATGGAA TGATCATATG 41786 .......... .......... .......... .......... .......... .......... 280 GAAAATTCCT CTAAAGGAGA AATTTACAAG CCACTTAAAT TGGAGGAGGA ATAGAGAAAG 41846 .......... .......... .......... .......... .......... .......... 280 TCATCACATG AAGTGATATT AATGACAATA TTATATAATT GTCTTTTAAT TTGTTAGCAA 41906 .......... .......... .......... .......... .......... .......... 280 CAATAAAAAA TTCATAGCTA ATTCCTAATC TGCAAAAATG ATTAATTCTT TATTTTCTAG 41966 .......... .......... .......... .......... .......... .......... 280 AGATTCAAAG TTAATTAATT ATAAAACTCT CCCAATGAAT TTAGAAAACA GGGAATGTTT 42026 .......... .......... .......... .......... .......... .......... 280 TTTGGTTCGT AGGCAAGAAA GTTTTTGGAA TTAAACACAA CAAAAATAAT CCTCATATCC 42086 .......... .......... .......... .......... .......... .......... 280 TATTTTTAAC TAATACTTTA ATGTGTCTAG ATTTTTATTA ATATGTCTGC TTTATATTAA 42146 .......... .......... .......... .......... .......... .......... 280 AATTTCATTT TTTTAAAAAA TAATAGGAAA ATTCTCAGAC CGTCCATAAA GAAAAATCAA 42206 .......... .......... .......... .......... .......... .......... 280 AATTAAATAG TTTCTTCTAT TCAAAATTAA GATGAGTTGT CACCATACTT TTAGAATTTT 42266 .......... .......... .......... .......... .......... .......... 280 TGATTTTTTT ATGCAAGAAT AAGACTTACG AGAACAAATG GTAATCAAAA TAAGATAGGA 42326 .......... .......... .......... .......... .......... .......... 280 AAAAGGGTCA AATTTCCTTT TTTTTTCGCC TAACTTATTT TATTAACTAA TTCATATTTA 42386 .......... .......... .......... .......... .......... .......... 280 GTTGTGTCTA AAACAGGTTT AACTGATAAA GGTTAAATAA AAAAAAATGT TACTACTGTG 42446 .......... .......... .......... .......... .......... .......... 280 TTGATTTATC AATTTTGGGT TATTGAATTA ACCGTCTTAG AATATTAGTT CAGCTTCCAA 42506 .......... .......... .......... .......... .......... .......... 280 TTTTAAAATT TTAGTTAATG ATTAAATCAA TAACCTAATA AAATTATATT AAAACTACTT 42566 .......... .......... .......... .......... .......... .......... 280 TTTTTTATTT TTATTTCTAT TTATATAATA ATGACTTTAT TTAAACTTCA AATACAAAAC 42626 .......... .......... .......... .......... .......... .......... 280 CTATTTTCTT TTGCATTTTA TAATCAATGT ATTGATGCTG ATGTGTTTTG TGCACTTGTT 42686 .......... .......... .......... .......... .......... .......... 280 AAAGTTGTGT TATTATATTA TTTTAATATT AATATAATAA ATGAAGCAGT GTTTTTGCTT 42746 .......... .......... .......... .......... .......... .......... 280 GTAAATTTCT AGATTTCTAT TTATGAAGTT CTGACTTAAA CGTATCTAAC GAATAATTAA 42806 .......... .......... .......... .......... .......... .......... 280 ATAAAAAATC AAGTATTTAA GGATCGATAG TTGATTATCT AAATTATTGA TCATTGATTT 42866 .......... .......... .......... .......... .......... .......... 280 AGCATGTTTA TAAATAAAAA ATCGATAAAC TAAACCACAA AATCTAACCA GTAAACATTG 42926 .......... .......... .......... .......... .......... .......... 280 AGACCATATC GAATACACCT ACAAGTAATT CATTAATAAG TTTCAAATTC AATATACAAC 42986 .......... .......... .......... .......... .......... .......... 280 AACAAAAAAA AAAGGCAAGA AAATGTTGAA GTAAAGTAAA TAACGACACA CGATTATTAA 43046 .......... .......... .......... .......... .......... .......... 280 AGATATTATT ATTTGTTCAT CAATGATCAA AATATATAAG TTGAAGGGAG TGTGTATACA 43106 .......... .......... .......... .......... .......... .......... 280 TTACACAAAT AAGATATTAT TATCTCACCC AACATAAATA GTTTAACAAA CCTTTTAAGA 43166 .......... .......... .......... .......... .......... .......... 280 TACTTATTGT TTTGGTAATT TTTCATACCA TATAATTTGT AGCAAAATAT GCTTTATATT 43226 .......... .......... .......... .......... .......... .......... 280 GTGGCATTAA TTATGGGCAA AAAACAACCT TATAATTTGT ACTATCACTA GGGCAAGCAA 43286 ||||| || .......... .......... .......... .......... .......... .-GCAAGTAA 288 ATGTGCTAGT AGCATCATCT TGTGGGTAGC TATAGGCATC AGGGCATCTC TGTTTGAAAA 43346 ||||||| || || ||| ||| |||||||||| |||| ||||| || ||||| | ||||||| ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA 348 ATTTCGACCA CTCAGTAGGA CTACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 43406 |||| ||| | ||| ||||| | |||||||| |||||||||| |||||||||| |||||||||| ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 408 ACGTGGTACA AGGATTGTTA CATCCTCCGG TTACTTTAAG TTGACTAGGG CATTCACCGT 43466 |||||||||| ||| |||||| |||||||| | ||| ||||| | ||| |||||||| | ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT 468 TTATATTGGC GGTGCATTGA ATTGAGTGGC ATTTTCCTCC ACTGGAATTG GTTGTGGCGA 43526 |||||||||| ||||| ||| |||| ||| | |||||||||| ||| | || |||| ||| | TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA 528 AAGTCATCGG TATATTAAAT CCATCGACTA AAGAAATGTC CCAGAAATCT AGGTTGTTAA 43586 ||||||| || ||||||||| |||||||||| |||||||||| ||| |||||| | |||| ||| AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA 588 ACTGGTTCAA GGCGTA 43602 |||||| ||| |||||| ACTGGTCCAA GGCGTA 604 hqPGS_C08HBa0235H18.1+_SGN-E263405+ (40947 40984,43278 43602) ******************************************************************************** EST sequence 99 +strand 671 n (File: SGN-E213158+) 1 GAGAACTAGT CTCGAGTTTT TTTTTTTTTT TTTTTTTTTT TAATTCAAAT GCACTGTTGT 61 TTTATACATC TAAGACAAAA GTACACATGA GATGTAACTC TTATTCCGGT CTTTAAGTTT 121 GTTACGAACT CTTATCAATA AAGTAAAAGT GAATATTTAA AAAACTGAGC TATTAAGATT 181 TTTCATTACG GTAGAGATCA GTTGACTAAT TGAGGCGATT TAAAATGAAG AAACTCAAAT 241 TCACTTGGCC ACTTCATCAG TACTTGCAGG CATCTCCAAG GGGAAATTTG GATCAGCAAC 301 ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT 361 TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA 421 CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT 481 ACAAGGGTTG TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT 541 GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT 601 TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC 661 CAAGGCGTAC T Predicted gene structure (within gDNA segment 38419 to 44529): Exon 1 40947 40984 ( 38 n); cDNA 308 345 ( 38 n); score: 0.895 Intron 1 40985 43277 (2293 n); Pd: 0.925 (s: 0), Pa: 0.758 (s: 0.86) Exon 2 43278 43602 ( 325 n); cDNA 346 669 ( 324 n); score: 0.868 PPA cDNA 41 16 MATCH C08HBa0235H18.1+ SGN-E213158+ 0.868 363 0.541 C PGS_C08HBa0235H18.1+_SGN-E213158+ (40947 40984,43278 43602) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGG.. .......... .......... 345 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 .......... .......... .......... .......... .......... .......... 345 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 .......... .......... .......... .......... .......... .......... 345 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 .......... .......... .......... .......... .......... .......... 345 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 .......... .......... .......... .......... .......... .......... 345 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 .......... .......... .......... .......... .......... .......... 345 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 .......... .......... .......... .......... .......... .......... 345 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT ACGACCCCAT 41426 .......... .......... .......... .......... .......... .......... 345 ATACGTGCCA TCTTAGTGCC CCTCGGCGCA TTGATGACCC ATGTTTGGCC TCGATCGAGA 41486 .......... .......... .......... .......... .......... .......... 345 CGTCGACCAC CGCCTATCGG GGTCGATGCT GCCCAAACGG TGTAGGGACA ATTGTTGCGT 41546 .......... .......... .......... .......... .......... .......... 345 ACCTCGATAG TGGCAGCATA AGTGTAAGTC ACTAAAGCAA GGAAGAAGAA AATAAAAGAA 41606 .......... .......... .......... .......... .......... .......... 345 GATGTCAAGT AGCCCATGTT TGTGTACATA TTTTTGTTTA TTTTTGATAT ATAGTTACAT 41666 .......... .......... .......... .......... .......... .......... 345 ATTATTGGGT AGTTTATATA GGGGTGTGAC AACTTTTGGC ACCTTGCACA TTTAGAATTC 41726 .......... .......... .......... .......... .......... .......... 345 CACTATATAA GTTGTGGAAA TTTTTACCAT AAAGAATTAA ATGGATGGAA TGATCATATG 41786 .......... .......... .......... .......... .......... .......... 345 GAAAATTCCT CTAAAGGAGA AATTTACAAG CCACTTAAAT TGGAGGAGGA ATAGAGAAAG 41846 .......... .......... .......... .......... .......... .......... 345 TCATCACATG AAGTGATATT AATGACAATA TTATATAATT GTCTTTTAAT TTGTTAGCAA 41906 .......... .......... .......... .......... .......... .......... 345 CAATAAAAAA TTCATAGCTA ATTCCTAATC TGCAAAAATG ATTAATTCTT TATTTTCTAG 41966 .......... .......... .......... .......... .......... .......... 345 AGATTCAAAG TTAATTAATT ATAAAACTCT CCCAATGAAT TTAGAAAACA GGGAATGTTT 42026 .......... .......... .......... .......... .......... .......... 345 TTTGGTTCGT AGGCAAGAAA GTTTTTGGAA TTAAACACAA CAAAAATAAT CCTCATATCC 42086 .......... .......... .......... .......... .......... .......... 345 TATTTTTAAC TAATACTTTA ATGTGTCTAG ATTTTTATTA ATATGTCTGC TTTATATTAA 42146 .......... .......... .......... .......... .......... .......... 345 AATTTCATTT TTTTAAAAAA TAATAGGAAA ATTCTCAGAC CGTCCATAAA GAAAAATCAA 42206 .......... .......... .......... .......... .......... .......... 345 AATTAAATAG TTTCTTCTAT TCAAAATTAA GATGAGTTGT CACCATACTT TTAGAATTTT 42266 .......... .......... .......... .......... .......... .......... 345 TGATTTTTTT ATGCAAGAAT AAGACTTACG AGAACAAATG GTAATCAAAA TAAGATAGGA 42326 .......... .......... .......... .......... .......... .......... 345 AAAAGGGTCA AATTTCCTTT TTTTTTCGCC TAACTTATTT TATTAACTAA TTCATATTTA 42386 .......... .......... .......... .......... .......... .......... 345 GTTGTGTCTA AAACAGGTTT AACTGATAAA GGTTAAATAA AAAAAAATGT TACTACTGTG 42446 .......... .......... .......... .......... .......... .......... 345 TTGATTTATC AATTTTGGGT TATTGAATTA ACCGTCTTAG AATATTAGTT CAGCTTCCAA 42506 .......... .......... .......... .......... .......... .......... 345 TTTTAAAATT TTAGTTAATG ATTAAATCAA TAACCTAATA AAATTATATT AAAACTACTT 42566 .......... .......... .......... .......... .......... .......... 345 TTTTTTATTT TTATTTCTAT TTATATAATA ATGACTTTAT TTAAACTTCA AATACAAAAC 42626 .......... .......... .......... .......... .......... .......... 345 CTATTTTCTT TTGCATTTTA TAATCAATGT ATTGATGCTG ATGTGTTTTG TGCACTTGTT 42686 .......... .......... .......... .......... .......... .......... 345 AAAGTTGTGT TATTATATTA TTTTAATATT AATATAATAA ATGAAGCAGT GTTTTTGCTT 42746 .......... .......... .......... .......... .......... .......... 345 GTAAATTTCT AGATTTCTAT TTATGAAGTT CTGACTTAAA CGTATCTAAC GAATAATTAA 42806 .......... .......... .......... .......... .......... .......... 345 ATAAAAAATC AAGTATTTAA GGATCGATAG TTGATTATCT AAATTATTGA TCATTGATTT 42866 .......... .......... .......... .......... .......... .......... 345 AGCATGTTTA TAAATAAAAA ATCGATAAAC TAAACCACAA AATCTAACCA GTAAACATTG 42926 .......... .......... .......... .......... .......... .......... 345 AGACCATATC GAATACACCT ACAAGTAATT CATTAATAAG TTTCAAATTC AATATACAAC 42986 .......... .......... .......... .......... .......... .......... 345 AACAAAAAAA AAAGGCAAGA AAATGTTGAA GTAAAGTAAA TAACGACACA CGATTATTAA 43046 .......... .......... .......... .......... .......... .......... 345 AGATATTATT ATTTGTTCAT CAATGATCAA AATATATAAG TTGAAGGGAG TGTGTATACA 43106 .......... .......... .......... .......... .......... .......... 345 TTACACAAAT AAGATATTAT TATCTCACCC AACATAAATA GTTTAACAAA CCTTTTAAGA 43166 .......... .......... .......... .......... .......... .......... 345 TACTTATTGT TTTGGTAATT TTTCATACCA TATAATTTGT AGCAAAATAT GCTTTATATT 43226 .......... .......... .......... .......... .......... .......... 345 GTGGCATTAA TTATGGGCAA AAAACAACCT TATAATTTGT ACTATCACTA GGGCAAGCAA 43286 ||||| || .......... .......... .......... .......... .......... .-GCAAGTAA 353 ATGTGCTAGT AGCATCATCT TGTGGGTAGC TATAGGCATC AGGGCATCTC TGTTTGAAAA 43346 ||||||| || || ||| ||| |||||||||| |||| ||||| || ||||| | ||||||| ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA 413 ATTTCGACCA CTCAGTAGGA CTACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 43406 |||| ||| | ||| ||||| | |||||||| |||||||||| |||||||||| |||||||||| ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 473 ACGTGGTACA AGGATTGTTA CATCCTCCGG TTACTTTAAG TTGACTAGGG CATTCACCGT 43466 |||||||||| ||| |||||| |||||||| | ||| ||||| | ||| |||||||| | ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT 533 TTATATTGGC GGTGCATTGA ATTGAGTGGC ATTTTCCTCC ACTGGAATTG GTTGTGGCGA 43526 |||||||||| ||||| ||| |||| ||| | |||||||||| ||| | || |||| ||| | TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA 593 AAGTCATCGG TATATTAAAT CCATCGACTA AAGAAATGTC CCAGAAATCT AGGTTGTTAA 43586 ||||||| || ||||||||| |||||||||| |||||||||| ||| |||||| | |||| ||| AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA 653 ACTGGTTCAA GGCGTA 43602 |||||| ||| |||||| ACTGGTCCAA GGCGTA 669 hqPGS_C08HBa0235H18.1+_SGN-E213158+ (40947 40984,43278 43602) ******************************************************************************** EST sequence 747 -strand 526 n (File: SGN-E255494-) 1 AAGTAAAAGT GAATATTTAA AAAACTGAGC TATTAAGATT TTTCATTACG GTAGAGATCA 61 GTTGACTAAT TGAGGCGATT TAAAATGAAG AAACTCAAAT TCACTTGGCC ACTTCATCAG 121 TACTTGCAGG CATCTCCAAG GGGAAATTTG GATCAGCAAC ACCATTAGGA CAAAAGACAA 181 CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT TGTAGGATCG TCTTGTGGGT 241 AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA CAACTCTGTA GGGCCACATG 301 GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT ACAAGGGTTG TTACATCCTC 361 CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT GGCCGTGCAA TGAATTGCGT 421 GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT TGGAATATTA AATCCATCGA 481 CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGC Predicted gene structure (within gDNA segment 39809 to 44469): Exon 1 40947 40984 ( 38 n); cDNA 168 205 ( 38 n); score: 0.895 Intron 1 40985 43277 (2293 n); Pd: 0.925 (s: 0), Pa: 0.758 (s: 0.86) Exon 2 43278 43599 ( 322 n); cDNA 206 526 ( 321 n); score: 0.866 MATCH C08HBa0235H18.1+ SGN-E255494- 0.866 360 0.684 C PGS_C08HBa0235H18.1+_SGN-E255494- (40947 40984,43278 43599) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGG.. .......... .......... 205 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 .......... .......... .......... .......... .......... .......... 205 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 .......... .......... .......... .......... .......... .......... 205 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 .......... .......... .......... .......... .......... .......... 205 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 .......... .......... .......... .......... .......... .......... 205 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 .......... .......... .......... .......... .......... .......... 205 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 .......... .......... .......... .......... .......... .......... 205 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT ACGACCCCAT 41426 .......... .......... .......... .......... .......... .......... 205 ATACGTGCCA TCTTAGTGCC CCTCGGCGCA TTGATGACCC ATGTTTGGCC TCGATCGAGA 41486 .......... .......... .......... .......... .......... .......... 205 CGTCGACCAC CGCCTATCGG GGTCGATGCT GCCCAAACGG TGTAGGGACA ATTGTTGCGT 41546 .......... .......... .......... .......... .......... .......... 205 ACCTCGATAG TGGCAGCATA AGTGTAAGTC ACTAAAGCAA GGAAGAAGAA AATAAAAGAA 41606 .......... .......... .......... .......... .......... .......... 205 GATGTCAAGT AGCCCATGTT TGTGTACATA TTTTTGTTTA TTTTTGATAT ATAGTTACAT 41666 .......... .......... .......... .......... .......... .......... 205 ATTATTGGGT AGTTTATATA GGGGTGTGAC AACTTTTGGC ACCTTGCACA TTTAGAATTC 41726 .......... .......... .......... .......... .......... .......... 205 CACTATATAA GTTGTGGAAA TTTTTACCAT AAAGAATTAA ATGGATGGAA TGATCATATG 41786 .......... .......... .......... .......... .......... .......... 205 GAAAATTCCT CTAAAGGAGA AATTTACAAG CCACTTAAAT TGGAGGAGGA ATAGAGAAAG 41846 .......... .......... .......... .......... .......... .......... 205 TCATCACATG AAGTGATATT AATGACAATA TTATATAATT GTCTTTTAAT TTGTTAGCAA 41906 .......... .......... .......... .......... .......... .......... 205 CAATAAAAAA TTCATAGCTA ATTCCTAATC TGCAAAAATG ATTAATTCTT TATTTTCTAG 41966 .......... .......... .......... .......... .......... .......... 205 AGATTCAAAG TTAATTAATT ATAAAACTCT CCCAATGAAT TTAGAAAACA GGGAATGTTT 42026 .......... .......... .......... .......... .......... .......... 205 TTTGGTTCGT AGGCAAGAAA GTTTTTGGAA TTAAACACAA CAAAAATAAT CCTCATATCC 42086 .......... .......... .......... .......... .......... .......... 205 TATTTTTAAC TAATACTTTA ATGTGTCTAG ATTTTTATTA ATATGTCTGC TTTATATTAA 42146 .......... .......... .......... .......... .......... .......... 205 AATTTCATTT TTTTAAAAAA TAATAGGAAA ATTCTCAGAC CGTCCATAAA GAAAAATCAA 42206 .......... .......... .......... .......... .......... .......... 205 AATTAAATAG TTTCTTCTAT TCAAAATTAA GATGAGTTGT CACCATACTT TTAGAATTTT 42266 .......... .......... .......... .......... .......... .......... 205 TGATTTTTTT ATGCAAGAAT AAGACTTACG AGAACAAATG GTAATCAAAA TAAGATAGGA 42326 .......... .......... .......... .......... .......... .......... 205 AAAAGGGTCA AATTTCCTTT TTTTTTCGCC TAACTTATTT TATTAACTAA TTCATATTTA 42386 .......... .......... .......... .......... .......... .......... 205 GTTGTGTCTA AAACAGGTTT AACTGATAAA GGTTAAATAA AAAAAAATGT TACTACTGTG 42446 .......... .......... .......... .......... .......... .......... 205 TTGATTTATC AATTTTGGGT TATTGAATTA ACCGTCTTAG AATATTAGTT CAGCTTCCAA 42506 .......... .......... .......... .......... .......... .......... 205 TTTTAAAATT TTAGTTAATG ATTAAATCAA TAACCTAATA AAATTATATT AAAACTACTT 42566 .......... .......... .......... .......... .......... .......... 205 TTTTTTATTT TTATTTCTAT TTATATAATA ATGACTTTAT TTAAACTTCA AATACAAAAC 42626 .......... .......... .......... .......... .......... .......... 205 CTATTTTCTT TTGCATTTTA TAATCAATGT ATTGATGCTG ATGTGTTTTG TGCACTTGTT 42686 .......... .......... .......... .......... .......... .......... 205 AAAGTTGTGT TATTATATTA TTTTAATATT AATATAATAA ATGAAGCAGT GTTTTTGCTT 42746 .......... .......... .......... .......... .......... .......... 205 GTAAATTTCT AGATTTCTAT TTATGAAGTT CTGACTTAAA CGTATCTAAC GAATAATTAA 42806 .......... .......... .......... .......... .......... .......... 205 ATAAAAAATC AAGTATTTAA GGATCGATAG TTGATTATCT AAATTATTGA TCATTGATTT 42866 .......... .......... .......... .......... .......... .......... 205 AGCATGTTTA TAAATAAAAA ATCGATAAAC TAAACCACAA AATCTAACCA GTAAACATTG 42926 .......... .......... .......... .......... .......... .......... 205 AGACCATATC GAATACACCT ACAAGTAATT CATTAATAAG TTTCAAATTC AATATACAAC 42986 .......... .......... .......... .......... .......... .......... 205 AACAAAAAAA AAAGGCAAGA AAATGTTGAA GTAAAGTAAA TAACGACACA CGATTATTAA 43046 .......... .......... .......... .......... .......... .......... 205 AGATATTATT ATTTGTTCAT CAATGATCAA AATATATAAG TTGAAGGGAG TGTGTATACA 43106 .......... .......... .......... .......... .......... .......... 205 TTACACAAAT AAGATATTAT TATCTCACCC AACATAAATA GTTTAACAAA CCTTTTAAGA 43166 .......... .......... .......... .......... .......... .......... 205 TACTTATTGT TTTGGTAATT TTTCATACCA TATAATTTGT AGCAAAATAT GCTTTATATT 43226 .......... .......... .......... .......... .......... .......... 205 GTGGCATTAA TTATGGGCAA AAAACAACCT TATAATTTGT ACTATCACTA GGGCAAGCAA 43286 ||||| || .......... .......... .......... .......... .......... .-GCAAGTAA 213 ATGTGCTAGT AGCATCATCT TGTGGGTAGC TATAGGCATC AGGGCATCTC TGTTTGAAAA 43346 ||||||| || || ||| ||| |||||||||| |||| ||||| || ||||| | ||||||| ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA 273 ATTTCGACCA CTCAGTAGGA CTACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 43406 |||| ||| | ||| ||||| | |||||||| |||||||||| |||||||||| |||||||||| ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 333 ACGTGGTACA AGGATTGTTA CATCCTCCGG TTACTTTAAG TTGACTAGGG CATTCACCGT 43466 |||||||||| ||| |||||| |||||||| | ||| ||||| | ||| |||||||| | ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT 393 TTATATTGGC GGTGCATTGA ATTGAGTGGC ATTTTCCTCC ACTGGAATTG GTTGTGGCGA 43526 |||||||||| ||||| ||| |||| ||| | |||||||||| ||| | || |||| ||| | TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA 453 AAGTCATCGG TATATTAAAT CCATCGACTA AAGAAATGTC CCAGAAATCT AGGTTGTTAA 43586 ||||||| || ||||||||| |||||||||| |||||||||| ||| |||||| | |||| ||| AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA 513 ACTGGTTCAA GGC 43599 |||||| ||| ||| ACTGGTCCAA GGC 526 hqPGS_C08HBa0235H18.1+_SGN-E255494- (40947 40984,43278 43599) ******************************************************************************** EST sequence 909 -strand 633 n (File: SGN-E274599-) 1 TTTTTTTTTT AATTCAAATG CACTGTTGTT TTATACATCT AAGACAAAAG TACACATGAG 61 ATGTAACTCT TATTCCGGTC TTTAAGTTTG TTACGAACTC TTATCAATAA AGTAAAAGTG 121 AATATTTAAA AAACTGAGCT ATTAAGATTT TTCATTACGG TAGAGATCAG TTGACTAATT 181 GAGGCGATTT AAAATGAAGA AACTCAAATT CACTTGGCCA CTTCATCAGT ACTTGCAGGC 241 ATCTCCAAGG GGAAATTTGG ATCAGCAACA CCATTAGGAC AAAAGACAAC CCTATAGTTT 301 GTACTACCAC CAGGGCAAGT AAATGTGCTT GTAGGATCGT CTTGTGGGTA GCTATAAGCA 361 TCGGGACATC TTTTCTTGAA AAATTTGGAC AACTCTGTAG GGCCACATGG ACCTTGGGTG 421 CAACAATATT GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA 481 AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 541 CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 601 TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAG Predicted gene structure (within gDNA segment 38719 to 44449): Exon 1 40947 40984 ( 38 n); cDNA 277 314 ( 38 n); score: 0.895 Intron 1 40985 43277 (2293 n); Pd: 0.925 (s: 0), Pa: 0.758 (s: 0.86) Exon 2 43278 43597 ( 320 n); cDNA 315 633 ( 319 n); score: 0.866 PPA cDNA 10 1 MATCH C08HBa0235H18.1+ SGN-E274599- 0.866 358 0.566 C PGS_C08HBa0235H18.1+_SGN-E274599- (40947 40984,43278 43597) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGG.. .......... .......... 314 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 .......... .......... .......... .......... .......... .......... 314 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 .......... .......... .......... .......... .......... .......... 314 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 .......... .......... .......... .......... .......... .......... 314 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 .......... .......... .......... .......... .......... .......... 314 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 .......... .......... .......... .......... .......... .......... 314 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 .......... .......... .......... .......... .......... .......... 314 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT ACGACCCCAT 41426 .......... .......... .......... .......... .......... .......... 314 ATACGTGCCA TCTTAGTGCC CCTCGGCGCA TTGATGACCC ATGTTTGGCC TCGATCGAGA 41486 .......... .......... .......... .......... .......... .......... 314 CGTCGACCAC CGCCTATCGG GGTCGATGCT GCCCAAACGG TGTAGGGACA ATTGTTGCGT 41546 .......... .......... .......... .......... .......... .......... 314 ACCTCGATAG TGGCAGCATA AGTGTAAGTC ACTAAAGCAA GGAAGAAGAA AATAAAAGAA 41606 .......... .......... .......... .......... .......... .......... 314 GATGTCAAGT AGCCCATGTT TGTGTACATA TTTTTGTTTA TTTTTGATAT ATAGTTACAT 41666 .......... .......... .......... .......... .......... .......... 314 ATTATTGGGT AGTTTATATA GGGGTGTGAC AACTTTTGGC ACCTTGCACA TTTAGAATTC 41726 .......... .......... .......... .......... .......... .......... 314 CACTATATAA GTTGTGGAAA TTTTTACCAT AAAGAATTAA ATGGATGGAA TGATCATATG 41786 .......... .......... .......... .......... .......... .......... 314 GAAAATTCCT CTAAAGGAGA AATTTACAAG CCACTTAAAT TGGAGGAGGA ATAGAGAAAG 41846 .......... .......... .......... .......... .......... .......... 314 TCATCACATG AAGTGATATT AATGACAATA TTATATAATT GTCTTTTAAT TTGTTAGCAA 41906 .......... .......... .......... .......... .......... .......... 314 CAATAAAAAA TTCATAGCTA ATTCCTAATC TGCAAAAATG ATTAATTCTT TATTTTCTAG 41966 .......... .......... .......... .......... .......... .......... 314 AGATTCAAAG TTAATTAATT ATAAAACTCT CCCAATGAAT TTAGAAAACA GGGAATGTTT 42026 .......... .......... .......... .......... .......... .......... 314 TTTGGTTCGT AGGCAAGAAA GTTTTTGGAA TTAAACACAA CAAAAATAAT CCTCATATCC 42086 .......... .......... .......... .......... .......... .......... 314 TATTTTTAAC TAATACTTTA ATGTGTCTAG ATTTTTATTA ATATGTCTGC TTTATATTAA 42146 .......... .......... .......... .......... .......... .......... 314 AATTTCATTT TTTTAAAAAA TAATAGGAAA ATTCTCAGAC CGTCCATAAA GAAAAATCAA 42206 .......... .......... .......... .......... .......... .......... 314 AATTAAATAG TTTCTTCTAT TCAAAATTAA GATGAGTTGT CACCATACTT TTAGAATTTT 42266 .......... .......... .......... .......... .......... .......... 314 TGATTTTTTT ATGCAAGAAT AAGACTTACG AGAACAAATG GTAATCAAAA TAAGATAGGA 42326 .......... .......... .......... .......... .......... .......... 314 AAAAGGGTCA AATTTCCTTT TTTTTTCGCC TAACTTATTT TATTAACTAA TTCATATTTA 42386 .......... .......... .......... .......... .......... .......... 314 GTTGTGTCTA AAACAGGTTT AACTGATAAA GGTTAAATAA AAAAAAATGT TACTACTGTG 42446 .......... .......... .......... .......... .......... .......... 314 TTGATTTATC AATTTTGGGT TATTGAATTA ACCGTCTTAG AATATTAGTT CAGCTTCCAA 42506 .......... .......... .......... .......... .......... .......... 314 TTTTAAAATT TTAGTTAATG ATTAAATCAA TAACCTAATA AAATTATATT AAAACTACTT 42566 .......... .......... .......... .......... .......... .......... 314 TTTTTTATTT TTATTTCTAT TTATATAATA ATGACTTTAT TTAAACTTCA AATACAAAAC 42626 .......... .......... .......... .......... .......... .......... 314 CTATTTTCTT TTGCATTTTA TAATCAATGT ATTGATGCTG ATGTGTTTTG TGCACTTGTT 42686 .......... .......... .......... .......... .......... .......... 314 AAAGTTGTGT TATTATATTA TTTTAATATT AATATAATAA ATGAAGCAGT GTTTTTGCTT 42746 .......... .......... .......... .......... .......... .......... 314 GTAAATTTCT AGATTTCTAT TTATGAAGTT CTGACTTAAA CGTATCTAAC GAATAATTAA 42806 .......... .......... .......... .......... .......... .......... 314 ATAAAAAATC AAGTATTTAA GGATCGATAG TTGATTATCT AAATTATTGA TCATTGATTT 42866 .......... .......... .......... .......... .......... .......... 314 AGCATGTTTA TAAATAAAAA ATCGATAAAC TAAACCACAA AATCTAACCA GTAAACATTG 42926 .......... .......... .......... .......... .......... .......... 314 AGACCATATC GAATACACCT ACAAGTAATT CATTAATAAG TTTCAAATTC AATATACAAC 42986 .......... .......... .......... .......... .......... .......... 314 AACAAAAAAA AAAGGCAAGA AAATGTTGAA GTAAAGTAAA TAACGACACA CGATTATTAA 43046 .......... .......... .......... .......... .......... .......... 314 AGATATTATT ATTTGTTCAT CAATGATCAA AATATATAAG TTGAAGGGAG TGTGTATACA 43106 .......... .......... .......... .......... .......... .......... 314 TTACACAAAT AAGATATTAT TATCTCACCC AACATAAATA GTTTAACAAA CCTTTTAAGA 43166 .......... .......... .......... .......... .......... .......... 314 TACTTATTGT TTTGGTAATT TTTCATACCA TATAATTTGT AGCAAAATAT GCTTTATATT 43226 .......... .......... .......... .......... .......... .......... 314 GTGGCATTAA TTATGGGCAA AAAACAACCT TATAATTTGT ACTATCACTA GGGCAAGCAA 43286 ||||| || .......... .......... .......... .......... .......... .-GCAAGTAA 322 ATGTGCTAGT AGCATCATCT TGTGGGTAGC TATAGGCATC AGGGCATCTC TGTTTGAAAA 43346 ||||||| || || ||| ||| |||||||||| |||| ||||| || ||||| | ||||||| ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA 382 ATTTCGACCA CTCAGTAGGA CTACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 43406 |||| ||| | ||| ||||| | |||||||| |||||||||| |||||||||| |||||||||| ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 442 ACGTGGTACA AGGATTGTTA CATCCTCCGG TTACTTTAAG TTGACTAGGG CATTCACCGT 43466 |||||||||| ||| |||||| |||||||| | ||| ||||| | ||| |||||||| | ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT 502 TTATATTGGC GGTGCATTGA ATTGAGTGGC ATTTTCCTCC ACTGGAATTG GTTGTGGCGA 43526 |||||||||| ||||| ||| |||| ||| | |||||||||| ||| | || |||| ||| | TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA 562 AAGTCATCGG TATATTAAAT CCATCGACTA AAGAAATGTC CCAGAAATCT AGGTTGTTAA 43586 ||||||| || ||||||||| |||||||||| |||||||||| ||| |||||| | |||| ||| AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA 622 ACTGGTTCAA G 43597 |||||| ||| | ACTGGTCCAA G 633 hqPGS_C08HBa0235H18.1+_SGN-E274599- (40947 40984,43278 43597) ******************************************************************************** EST sequence 92 +strand 613 n (File: SGN-E213028+) 1 ACTAGTCTCG AGTTTTTTTT TTTTTTTTTT TTTTTTTTAC ACATGAGATG TAACTCTTAT 61 TCCGGTCTTT AAGTTTGTTA CGAACTCTTA TCAATAAAGT AAAAGTGAAT ATTTAAAAAA 121 CTGAGCTATT AAGATTTTTC ATTACGGTAG AGATCAGTTG ACTAATTGAG GCGATTTAAA 181 ATGAAGAAAC TCAAATTCAC TTGGCCACTT CATCAGTACT TGCAGGCATC TCCAAGGGGA 241 AATTTGGATC AGCAACACCA TTAGGACAAA AGACAACCCT ATAGTTTGTA CTACCACCAG 301 GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT ATAAGCATCG GGACATCTTT 361 TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT 421 GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC 481 ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG 541 TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA 601 AGTTGCTAAA CTG Predicted gene structure (within gDNA segment 38859 to 44389): Exon 1 40947 40984 ( 38 n); cDNA 264 301 ( 38 n); score: 0.895 Intron 1 40985 43277 (2293 n); Pd: 0.925 (s: 0), Pa: 0.758 (s: 0.86) Exon 2 43278 43590 ( 313 n); cDNA 302 613 ( 312 n); score: 0.866 PPA cDNA 38 12 MATCH C08HBa0235H18.1+ SGN-E213028+ 0.866 351 0.573 C PGS_C08HBa0235H18.1+_SGN-E213028+ (40947 40984,43278 43590) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGG.. .......... .......... 301 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 .......... .......... .......... .......... .......... .......... 301 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 .......... .......... .......... .......... .......... .......... 301 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 .......... .......... .......... .......... .......... .......... 301 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 .......... .......... .......... .......... .......... .......... 301 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 .......... .......... .......... .......... .......... .......... 301 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 .......... .......... .......... .......... .......... .......... 301 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT ACGACCCCAT 41426 .......... .......... .......... .......... .......... .......... 301 ATACGTGCCA TCTTAGTGCC CCTCGGCGCA TTGATGACCC ATGTTTGGCC TCGATCGAGA 41486 .......... .......... .......... .......... .......... .......... 301 CGTCGACCAC CGCCTATCGG GGTCGATGCT GCCCAAACGG TGTAGGGACA ATTGTTGCGT 41546 .......... .......... .......... .......... .......... .......... 301 ACCTCGATAG TGGCAGCATA AGTGTAAGTC ACTAAAGCAA GGAAGAAGAA AATAAAAGAA 41606 .......... .......... .......... .......... .......... .......... 301 GATGTCAAGT AGCCCATGTT TGTGTACATA TTTTTGTTTA TTTTTGATAT ATAGTTACAT 41666 .......... .......... .......... .......... .......... .......... 301 ATTATTGGGT AGTTTATATA GGGGTGTGAC AACTTTTGGC ACCTTGCACA TTTAGAATTC 41726 .......... .......... .......... .......... .......... .......... 301 CACTATATAA GTTGTGGAAA TTTTTACCAT AAAGAATTAA ATGGATGGAA TGATCATATG 41786 .......... .......... .......... .......... .......... .......... 301 GAAAATTCCT CTAAAGGAGA AATTTACAAG CCACTTAAAT TGGAGGAGGA ATAGAGAAAG 41846 .......... .......... .......... .......... .......... .......... 301 TCATCACATG AAGTGATATT AATGACAATA TTATATAATT GTCTTTTAAT TTGTTAGCAA 41906 .......... .......... .......... .......... .......... .......... 301 CAATAAAAAA TTCATAGCTA ATTCCTAATC TGCAAAAATG ATTAATTCTT TATTTTCTAG 41966 .......... .......... .......... .......... .......... .......... 301 AGATTCAAAG TTAATTAATT ATAAAACTCT CCCAATGAAT TTAGAAAACA GGGAATGTTT 42026 .......... .......... .......... .......... .......... .......... 301 TTTGGTTCGT AGGCAAGAAA GTTTTTGGAA TTAAACACAA CAAAAATAAT CCTCATATCC 42086 .......... .......... .......... .......... .......... .......... 301 TATTTTTAAC TAATACTTTA ATGTGTCTAG ATTTTTATTA ATATGTCTGC TTTATATTAA 42146 .......... .......... .......... .......... .......... .......... 301 AATTTCATTT TTTTAAAAAA TAATAGGAAA ATTCTCAGAC CGTCCATAAA GAAAAATCAA 42206 .......... .......... .......... .......... .......... .......... 301 AATTAAATAG TTTCTTCTAT TCAAAATTAA GATGAGTTGT CACCATACTT TTAGAATTTT 42266 .......... .......... .......... .......... .......... .......... 301 TGATTTTTTT ATGCAAGAAT AAGACTTACG AGAACAAATG GTAATCAAAA TAAGATAGGA 42326 .......... .......... .......... .......... .......... .......... 301 AAAAGGGTCA AATTTCCTTT TTTTTTCGCC TAACTTATTT TATTAACTAA TTCATATTTA 42386 .......... .......... .......... .......... .......... .......... 301 GTTGTGTCTA AAACAGGTTT AACTGATAAA GGTTAAATAA AAAAAAATGT TACTACTGTG 42446 .......... .......... .......... .......... .......... .......... 301 TTGATTTATC AATTTTGGGT TATTGAATTA ACCGTCTTAG AATATTAGTT CAGCTTCCAA 42506 .......... .......... .......... .......... .......... .......... 301 TTTTAAAATT TTAGTTAATG ATTAAATCAA TAACCTAATA AAATTATATT AAAACTACTT 42566 .......... .......... .......... .......... .......... .......... 301 TTTTTTATTT TTATTTCTAT TTATATAATA ATGACTTTAT TTAAACTTCA AATACAAAAC 42626 .......... .......... .......... .......... .......... .......... 301 CTATTTTCTT TTGCATTTTA TAATCAATGT ATTGATGCTG ATGTGTTTTG TGCACTTGTT 42686 .......... .......... .......... .......... .......... .......... 301 AAAGTTGTGT TATTATATTA TTTTAATATT AATATAATAA ATGAAGCAGT GTTTTTGCTT 42746 .......... .......... .......... .......... .......... .......... 301 GTAAATTTCT AGATTTCTAT TTATGAAGTT CTGACTTAAA CGTATCTAAC GAATAATTAA 42806 .......... .......... .......... .......... .......... .......... 301 ATAAAAAATC AAGTATTTAA GGATCGATAG TTGATTATCT AAATTATTGA TCATTGATTT 42866 .......... .......... .......... .......... .......... .......... 301 AGCATGTTTA TAAATAAAAA ATCGATAAAC TAAACCACAA AATCTAACCA GTAAACATTG 42926 .......... .......... .......... .......... .......... .......... 301 AGACCATATC GAATACACCT ACAAGTAATT CATTAATAAG TTTCAAATTC AATATACAAC 42986 .......... .......... .......... .......... .......... .......... 301 AACAAAAAAA AAAGGCAAGA AAATGTTGAA GTAAAGTAAA TAACGACACA CGATTATTAA 43046 .......... .......... .......... .......... .......... .......... 301 AGATATTATT ATTTGTTCAT CAATGATCAA AATATATAAG TTGAAGGGAG TGTGTATACA 43106 .......... .......... .......... .......... .......... .......... 301 TTACACAAAT AAGATATTAT TATCTCACCC AACATAAATA GTTTAACAAA CCTTTTAAGA 43166 .......... .......... .......... .......... .......... .......... 301 TACTTATTGT TTTGGTAATT TTTCATACCA TATAATTTGT AGCAAAATAT GCTTTATATT 43226 .......... .......... .......... .......... .......... .......... 301 GTGGCATTAA TTATGGGCAA AAAACAACCT TATAATTTGT ACTATCACTA GGGCAAGCAA 43286 ||||| || .......... .......... .......... .......... .......... .-GCAAGTAA 309 ATGTGCTAGT AGCATCATCT TGTGGGTAGC TATAGGCATC AGGGCATCTC TGTTTGAAAA 43346 ||||||| || || ||| ||| |||||||||| |||| ||||| || ||||| | ||||||| ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA 369 ATTTCGACCA CTCAGTAGGA CTACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 43406 |||| ||| | ||| ||||| | |||||||| |||||||||| |||||||||| |||||||||| ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 429 ACGTGGTACA AGGATTGTTA CATCCTCCGG TTACTTTAAG TTGACTAGGG CATTCACCGT 43466 |||||||||| ||| |||||| |||||||| | ||| ||||| | ||| |||||||| | ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT 489 TTATATTGGC GGTGCATTGA ATTGAGTGGC ATTTTCCTCC ACTGGAATTG GTTGTGGCGA 43526 |||||||||| ||||| ||| |||| ||| | |||||||||| ||| | || |||| ||| | TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA 549 AAGTCATCGG TATATTAAAT CCATCGACTA AAGAAATGTC CCAGAAATCT AGGTTGTTAA 43586 ||||||| || ||||||||| |||||||||| |||||||||| ||| |||||| | |||| ||| AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA 609 ACTG 43590 |||| ACTG 613 hqPGS_C08HBa0235H18.1+_SGN-E213028+ (40947 40984,43278 43590) ******************************************************************************** EST sequence 1083 -strand 591 n (File: SGN-E356290-) 1 TTTTTTTTTT TCAAATGCAC TGTTGTTTTA TACATCTAAG ACAAAAGTAC ACATGAGATG 61 TAACTCTTAT TCCGGTCTTT AAGTTTGTTA CGAACTCTTA TCAATAAAGT AAAAGTGAAT 121 ATTTAAAAAA CTGAGCTATT AAGATTTTTC ATTACGGTAG AGATCAGTTG ACTAATTGAG 181 GCGATTTAAA ATGAAGAAAC TCAAATTCAC TTGGCCACTT CATCAGTACT TGCAGGCATC 241 TCCAAGGGGA AATTTGGATC AGCAACACCA TTAGGACAAA AGACAACCCT ATAGTTTGTA 301 CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT ATAAGCATCG 361 GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC TTGGGTGCAA 421 CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG 481 GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA 541 CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA A Predicted gene structure (within gDNA segment 38749 to 45409): Exon 1 40947 40984 ( 38 n); cDNA 274 311 ( 38 n); score: 0.895 Intron 1 40985 43277 (2293 n); Pd: 0.925 (s: 0), Pa: 0.758 (s: 0.86) Exon 2 43278 43558 ( 281 n); cDNA 312 591 ( 280 n); score: 0.861 PPA cDNA 11 1 MATCH C08HBa0235H18.1+ SGN-E356290- 0.861 319 0.540 C PGS_C08HBa0235H18.1+_SGN-E356290- (40947 40984,43278 43558) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGG.. .......... .......... 311 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 .......... .......... .......... .......... .......... .......... 311 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 .......... .......... .......... .......... .......... .......... 311 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 .......... .......... .......... .......... .......... .......... 311 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 .......... .......... .......... .......... .......... .......... 311 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 .......... .......... .......... .......... .......... .......... 311 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 .......... .......... .......... .......... .......... .......... 311 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT ACGACCCCAT 41426 .......... .......... .......... .......... .......... .......... 311 ATACGTGCCA TCTTAGTGCC CCTCGGCGCA TTGATGACCC ATGTTTGGCC TCGATCGAGA 41486 .......... .......... .......... .......... .......... .......... 311 CGTCGACCAC CGCCTATCGG GGTCGATGCT GCCCAAACGG TGTAGGGACA ATTGTTGCGT 41546 .......... .......... .......... .......... .......... .......... 311 ACCTCGATAG TGGCAGCATA AGTGTAAGTC ACTAAAGCAA GGAAGAAGAA AATAAAAGAA 41606 .......... .......... .......... .......... .......... .......... 311 GATGTCAAGT AGCCCATGTT TGTGTACATA TTTTTGTTTA TTTTTGATAT ATAGTTACAT 41666 .......... .......... .......... .......... .......... .......... 311 ATTATTGGGT AGTTTATATA GGGGTGTGAC AACTTTTGGC ACCTTGCACA TTTAGAATTC 41726 .......... .......... .......... .......... .......... .......... 311 CACTATATAA GTTGTGGAAA TTTTTACCAT AAAGAATTAA ATGGATGGAA TGATCATATG 41786 .......... .......... .......... .......... .......... .......... 311 GAAAATTCCT CTAAAGGAGA AATTTACAAG CCACTTAAAT TGGAGGAGGA ATAGAGAAAG 41846 .......... .......... .......... .......... .......... .......... 311 TCATCACATG AAGTGATATT AATGACAATA TTATATAATT GTCTTTTAAT TTGTTAGCAA 41906 .......... .......... .......... .......... .......... .......... 311 CAATAAAAAA TTCATAGCTA ATTCCTAATC TGCAAAAATG ATTAATTCTT TATTTTCTAG 41966 .......... .......... .......... .......... .......... .......... 311 AGATTCAAAG TTAATTAATT ATAAAACTCT CCCAATGAAT TTAGAAAACA GGGAATGTTT 42026 .......... .......... .......... .......... .......... .......... 311 TTTGGTTCGT AGGCAAGAAA GTTTTTGGAA TTAAACACAA CAAAAATAAT CCTCATATCC 42086 .......... .......... .......... .......... .......... .......... 311 TATTTTTAAC TAATACTTTA ATGTGTCTAG ATTTTTATTA ATATGTCTGC TTTATATTAA 42146 .......... .......... .......... .......... .......... .......... 311 AATTTCATTT TTTTAAAAAA TAATAGGAAA ATTCTCAGAC CGTCCATAAA GAAAAATCAA 42206 .......... .......... .......... .......... .......... .......... 311 AATTAAATAG TTTCTTCTAT TCAAAATTAA GATGAGTTGT CACCATACTT TTAGAATTTT 42266 .......... .......... .......... .......... .......... .......... 311 TGATTTTTTT ATGCAAGAAT AAGACTTACG AGAACAAATG GTAATCAAAA TAAGATAGGA 42326 .......... .......... .......... .......... .......... .......... 311 AAAAGGGTCA AATTTCCTTT TTTTTTCGCC TAACTTATTT TATTAACTAA TTCATATTTA 42386 .......... .......... .......... .......... .......... .......... 311 GTTGTGTCTA AAACAGGTTT AACTGATAAA GGTTAAATAA AAAAAAATGT TACTACTGTG 42446 .......... .......... .......... .......... .......... .......... 311 TTGATTTATC AATTTTGGGT TATTGAATTA ACCGTCTTAG AATATTAGTT CAGCTTCCAA 42506 .......... .......... .......... .......... .......... .......... 311 TTTTAAAATT TTAGTTAATG ATTAAATCAA TAACCTAATA AAATTATATT AAAACTACTT 42566 .......... .......... .......... .......... .......... .......... 311 TTTTTTATTT TTATTTCTAT TTATATAATA ATGACTTTAT TTAAACTTCA AATACAAAAC 42626 .......... .......... .......... .......... .......... .......... 311 CTATTTTCTT TTGCATTTTA TAATCAATGT ATTGATGCTG ATGTGTTTTG TGCACTTGTT 42686 .......... .......... .......... .......... .......... .......... 311 AAAGTTGTGT TATTATATTA TTTTAATATT AATATAATAA ATGAAGCAGT GTTTTTGCTT 42746 .......... .......... .......... .......... .......... .......... 311 GTAAATTTCT AGATTTCTAT TTATGAAGTT CTGACTTAAA CGTATCTAAC GAATAATTAA 42806 .......... .......... .......... .......... .......... .......... 311 ATAAAAAATC AAGTATTTAA GGATCGATAG TTGATTATCT AAATTATTGA TCATTGATTT 42866 .......... .......... .......... .......... .......... .......... 311 AGCATGTTTA TAAATAAAAA ATCGATAAAC TAAACCACAA AATCTAACCA GTAAACATTG 42926 .......... .......... .......... .......... .......... .......... 311 AGACCATATC GAATACACCT ACAAGTAATT CATTAATAAG TTTCAAATTC AATATACAAC 42986 .......... .......... .......... .......... .......... .......... 311 AACAAAAAAA AAAGGCAAGA AAATGTTGAA GTAAAGTAAA TAACGACACA CGATTATTAA 43046 .......... .......... .......... .......... .......... .......... 311 AGATATTATT ATTTGTTCAT CAATGATCAA AATATATAAG TTGAAGGGAG TGTGTATACA 43106 .......... .......... .......... .......... .......... .......... 311 TTACACAAAT AAGATATTAT TATCTCACCC AACATAAATA GTTTAACAAA CCTTTTAAGA 43166 .......... .......... .......... .......... .......... .......... 311 TACTTATTGT TTTGGTAATT TTTCATACCA TATAATTTGT AGCAAAATAT GCTTTATATT 43226 .......... .......... .......... .......... .......... .......... 311 GTGGCATTAA TTATGGGCAA AAAACAACCT TATAATTTGT ACTATCACTA GGGCAAGCAA 43286 ||||| || .......... .......... .......... .......... .......... .-GCAAGTAA 319 ATGTGCTAGT AGCATCATCT TGTGGGTAGC TATAGGCATC AGGGCATCTC TGTTTGAAAA 43346 ||||||| || || ||| ||| |||||||||| |||| ||||| || ||||| | ||||||| ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA 379 ATTTCGACCA CTCAGTAGGA CTACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 43406 |||| ||| | ||| ||||| | |||||||| |||||||||| |||||||||| |||||||||| ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 439 ACGTGGTACA AGGATTGTTA CATCCTCCGG TTACTTTAAG TTGACTAGGG CATTCACCGT 43466 |||||||||| ||| |||||| |||||||| | ||| ||||| | ||| |||||||| | ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT 499 TTATATTGGC GGTGCATTGA ATTGAGTGGC ATTTTCCTCC ACTGGAATTG GTTGTGGCGA 43526 |||||||||| ||||| ||| |||| ||| | |||||||||| ||| | || |||| ||| | TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA 559 AAGTCATCGG TATATTAAAT CCATCGACTA AA 43558 ||||||| || ||||||||| |||||||||| || AAGTCATTGG AATATTAAAT CCATCGACTA AA 591 hqPGS_C08HBa0235H18.1+_SGN-E356290- (40947 40984,43278 43558) ******************************************************************************** EST sequence 478 -strand 592 n (File: SGN-E351033-) 1 TTTTTTTTTT TTCAAATGCA CTGTTGTTTT ATACATCTAA GACAAAAGTA CACATGAGAT 61 GTAACTCTTA TTCCGGTCTT TAAGTTTGTT ACGAACTCTT ATCAATAAAG TAAAAGTGAA 121 TATTTAAAAA ACTGAGCTAT TAAGATTTTT CATTACGGTA GAGATCAGTT GACTAATTGA 181 GGCGATTTAA AATGAAGAAA CTCAAATTCA CTTGGCCACT TCATCAGTAC TTGCAGGCAT 241 CTCCAAGGGG AAATTTGGAT CAGCAACACC ATTAGGACAA AAGACAACCC TATAGTTTGT 301 ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC 361 GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA 421 ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG 481 GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC 541 ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AA Predicted gene structure (within gDNA segment 38739 to 45409): Exon 1 40947 40984 ( 38 n); cDNA 275 312 ( 38 n); score: 0.895 Intron 1 40985 43277 (2293 n); Pd: 0.925 (s: 0), Pa: 0.758 (s: 0.86) Exon 2 43278 43558 ( 281 n); cDNA 313 592 ( 280 n); score: 0.861 PPA cDNA 12 1 MATCH C08HBa0235H18.1+ SGN-E351033- 0.861 319 0.539 C PGS_C08HBa0235H18.1+_SGN-E351033- (40947 40984,43278 43558) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGG.. .......... .......... 312 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 .......... .......... .......... .......... .......... .......... 312 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 .......... .......... .......... .......... .......... .......... 312 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 .......... .......... .......... .......... .......... .......... 312 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 .......... .......... .......... .......... .......... .......... 312 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 .......... .......... .......... .......... .......... .......... 312 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 .......... .......... .......... .......... .......... .......... 312 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT ACGACCCCAT 41426 .......... .......... .......... .......... .......... .......... 312 ATACGTGCCA TCTTAGTGCC CCTCGGCGCA TTGATGACCC ATGTTTGGCC TCGATCGAGA 41486 .......... .......... .......... .......... .......... .......... 312 CGTCGACCAC CGCCTATCGG GGTCGATGCT GCCCAAACGG TGTAGGGACA ATTGTTGCGT 41546 .......... .......... .......... .......... .......... .......... 312 ACCTCGATAG TGGCAGCATA AGTGTAAGTC ACTAAAGCAA GGAAGAAGAA AATAAAAGAA 41606 .......... .......... .......... .......... .......... .......... 312 GATGTCAAGT AGCCCATGTT TGTGTACATA TTTTTGTTTA TTTTTGATAT ATAGTTACAT 41666 .......... .......... .......... .......... .......... .......... 312 ATTATTGGGT AGTTTATATA GGGGTGTGAC AACTTTTGGC ACCTTGCACA TTTAGAATTC 41726 .......... .......... .......... .......... .......... .......... 312 CACTATATAA GTTGTGGAAA TTTTTACCAT AAAGAATTAA ATGGATGGAA TGATCATATG 41786 .......... .......... .......... .......... .......... .......... 312 GAAAATTCCT CTAAAGGAGA AATTTACAAG CCACTTAAAT TGGAGGAGGA ATAGAGAAAG 41846 .......... .......... .......... .......... .......... .......... 312 TCATCACATG AAGTGATATT AATGACAATA TTATATAATT GTCTTTTAAT TTGTTAGCAA 41906 .......... .......... .......... .......... .......... .......... 312 CAATAAAAAA TTCATAGCTA ATTCCTAATC TGCAAAAATG ATTAATTCTT TATTTTCTAG 41966 .......... .......... .......... .......... .......... .......... 312 AGATTCAAAG TTAATTAATT ATAAAACTCT CCCAATGAAT TTAGAAAACA GGGAATGTTT 42026 .......... .......... .......... .......... .......... .......... 312 TTTGGTTCGT AGGCAAGAAA GTTTTTGGAA TTAAACACAA CAAAAATAAT CCTCATATCC 42086 .......... .......... .......... .......... .......... .......... 312 TATTTTTAAC TAATACTTTA ATGTGTCTAG ATTTTTATTA ATATGTCTGC TTTATATTAA 42146 .......... .......... .......... .......... .......... .......... 312 AATTTCATTT TTTTAAAAAA TAATAGGAAA ATTCTCAGAC CGTCCATAAA GAAAAATCAA 42206 .......... .......... .......... .......... .......... .......... 312 AATTAAATAG TTTCTTCTAT TCAAAATTAA GATGAGTTGT CACCATACTT TTAGAATTTT 42266 .......... .......... .......... .......... .......... .......... 312 TGATTTTTTT ATGCAAGAAT AAGACTTACG AGAACAAATG GTAATCAAAA TAAGATAGGA 42326 .......... .......... .......... .......... .......... .......... 312 AAAAGGGTCA AATTTCCTTT TTTTTTCGCC TAACTTATTT TATTAACTAA TTCATATTTA 42386 .......... .......... .......... .......... .......... .......... 312 GTTGTGTCTA AAACAGGTTT AACTGATAAA GGTTAAATAA AAAAAAATGT TACTACTGTG 42446 .......... .......... .......... .......... .......... .......... 312 TTGATTTATC AATTTTGGGT TATTGAATTA ACCGTCTTAG AATATTAGTT CAGCTTCCAA 42506 .......... .......... .......... .......... .......... .......... 312 TTTTAAAATT TTAGTTAATG ATTAAATCAA TAACCTAATA AAATTATATT AAAACTACTT 42566 .......... .......... .......... .......... .......... .......... 312 TTTTTTATTT TTATTTCTAT TTATATAATA ATGACTTTAT TTAAACTTCA AATACAAAAC 42626 .......... .......... .......... .......... .......... .......... 312 CTATTTTCTT TTGCATTTTA TAATCAATGT ATTGATGCTG ATGTGTTTTG TGCACTTGTT 42686 .......... .......... .......... .......... .......... .......... 312 AAAGTTGTGT TATTATATTA TTTTAATATT AATATAATAA ATGAAGCAGT GTTTTTGCTT 42746 .......... .......... .......... .......... .......... .......... 312 GTAAATTTCT AGATTTCTAT TTATGAAGTT CTGACTTAAA CGTATCTAAC GAATAATTAA 42806 .......... .......... .......... .......... .......... .......... 312 ATAAAAAATC AAGTATTTAA GGATCGATAG TTGATTATCT AAATTATTGA TCATTGATTT 42866 .......... .......... .......... .......... .......... .......... 312 AGCATGTTTA TAAATAAAAA ATCGATAAAC TAAACCACAA AATCTAACCA GTAAACATTG 42926 .......... .......... .......... .......... .......... .......... 312 AGACCATATC GAATACACCT ACAAGTAATT CATTAATAAG TTTCAAATTC AATATACAAC 42986 .......... .......... .......... .......... .......... .......... 312 AACAAAAAAA AAAGGCAAGA AAATGTTGAA GTAAAGTAAA TAACGACACA CGATTATTAA 43046 .......... .......... .......... .......... .......... .......... 312 AGATATTATT ATTTGTTCAT CAATGATCAA AATATATAAG TTGAAGGGAG TGTGTATACA 43106 .......... .......... .......... .......... .......... .......... 312 TTACACAAAT AAGATATTAT TATCTCACCC AACATAAATA GTTTAACAAA CCTTTTAAGA 43166 .......... .......... .......... .......... .......... .......... 312 TACTTATTGT TTTGGTAATT TTTCATACCA TATAATTTGT AGCAAAATAT GCTTTATATT 43226 .......... .......... .......... .......... .......... .......... 312 GTGGCATTAA TTATGGGCAA AAAACAACCT TATAATTTGT ACTATCACTA GGGCAAGCAA 43286 ||||| || .......... .......... .......... .......... .......... .-GCAAGTAA 320 ATGTGCTAGT AGCATCATCT TGTGGGTAGC TATAGGCATC AGGGCATCTC TGTTTGAAAA 43346 ||||||| || || ||| ||| |||||||||| |||| ||||| || ||||| | ||||||| ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA 380 ATTTCGACCA CTCAGTAGGA CTACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 43406 |||| ||| | ||| ||||| | |||||||| |||||||||| |||||||||| |||||||||| ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 440 ACGTGGTACA AGGATTGTTA CATCCTCCGG TTACTTTAAG TTGACTAGGG CATTCACCGT 43466 |||||||||| ||| |||||| |||||||| | ||| ||||| | ||| |||||||| | ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT 500 TTATATTGGC GGTGCATTGA ATTGAGTGGC ATTTTCCTCC ACTGGAATTG GTTGTGGCGA 43526 |||||||||| ||||| ||| |||| ||| | |||||||||| ||| | || |||| ||| | TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA 560 AAGTCATCGG TATATTAAAT CCATCGACTA AA 43558 ||||||| || ||||||||| |||||||||| || AAGTCATTGG AATATTAAAT CCATCGACTA AA 592 hqPGS_C08HBa0235H18.1+_SGN-E351033- (40947 40984,43278 43558) ******************************************************************************** EST sequence 785 -strand 589 n (File: SGN-E254748-) 1 TTTTTTTTTT TTTNTTTTTN TTTTTTTTTN TTTAATTCAA ATGCACTGTT GTTTTATACA 61 TCTAAGACAA AAGTACACAT GAGATGTAAC TCTTATTCCG GTCTTTAAGT TTGTTACGAA 121 CTCTTATCAA TAAAGTAAAA GTGAATATTT AAAAAACTGA GCTATTAAGA TTTTTCATTA 181 CGGTAGAGAT CAGTTGACTA ATTGAGGCGA TTTAAAATGA AGAAACTCAA ATTCACTTGG 241 CCACTTCATC AGTACTTGCA GGCATCTCCA AGGGGAAATT TGGATCAGCA ACACCATTAG 301 GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA AGTAAATGTG CTTGTAGGAT 361 CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG GACAACTCTG 421 TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT 481 TGTTACATCC TCCAGGTACT TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC 541 AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGT Predicted gene structure (within gDNA segment 38489 to 45129): Exon 1 40947 40984 ( 38 n); cDNA 300 337 ( 38 n); score: 0.895 Intron 1 40985 43277 (2293 n); Pd: 0.925 (s: 0), Pa: 0.758 (s: 0.86) Exon 2 43278 43530 ( 253 n); cDNA 338 589 ( 252 n); score: 0.858 PPA cDNA 33 21 MATCH C08HBa0235H18.1+ SGN-E254748- 0.858 291 0.494 C PGS_C08HBa0235H18.1+_SGN-E254748- (40947 40984,43278 43530) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGG.. .......... .......... 337 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 .......... .......... .......... .......... .......... .......... 337 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 .......... .......... .......... .......... .......... .......... 337 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 .......... .......... .......... .......... .......... .......... 337 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 .......... .......... .......... .......... .......... .......... 337 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 .......... .......... .......... .......... .......... .......... 337 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 .......... .......... .......... .......... .......... .......... 337 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT ACGACCCCAT 41426 .......... .......... .......... .......... .......... .......... 337 ATACGTGCCA TCTTAGTGCC CCTCGGCGCA TTGATGACCC ATGTTTGGCC TCGATCGAGA 41486 .......... .......... .......... .......... .......... .......... 337 CGTCGACCAC CGCCTATCGG GGTCGATGCT GCCCAAACGG TGTAGGGACA ATTGTTGCGT 41546 .......... .......... .......... .......... .......... .......... 337 ACCTCGATAG TGGCAGCATA AGTGTAAGTC ACTAAAGCAA GGAAGAAGAA AATAAAAGAA 41606 .......... .......... .......... .......... .......... .......... 337 GATGTCAAGT AGCCCATGTT TGTGTACATA TTTTTGTTTA TTTTTGATAT ATAGTTACAT 41666 .......... .......... .......... .......... .......... .......... 337 ATTATTGGGT AGTTTATATA GGGGTGTGAC AACTTTTGGC ACCTTGCACA TTTAGAATTC 41726 .......... .......... .......... .......... .......... .......... 337 CACTATATAA GTTGTGGAAA TTTTTACCAT AAAGAATTAA ATGGATGGAA TGATCATATG 41786 .......... .......... .......... .......... .......... .......... 337 GAAAATTCCT CTAAAGGAGA AATTTACAAG CCACTTAAAT TGGAGGAGGA ATAGAGAAAG 41846 .......... .......... .......... .......... .......... .......... 337 TCATCACATG AAGTGATATT AATGACAATA TTATATAATT GTCTTTTAAT TTGTTAGCAA 41906 .......... .......... .......... .......... .......... .......... 337 CAATAAAAAA TTCATAGCTA ATTCCTAATC TGCAAAAATG ATTAATTCTT TATTTTCTAG 41966 .......... .......... .......... .......... .......... .......... 337 AGATTCAAAG TTAATTAATT ATAAAACTCT CCCAATGAAT TTAGAAAACA GGGAATGTTT 42026 .......... .......... .......... .......... .......... .......... 337 TTTGGTTCGT AGGCAAGAAA GTTTTTGGAA TTAAACACAA CAAAAATAAT CCTCATATCC 42086 .......... .......... .......... .......... .......... .......... 337 TATTTTTAAC TAATACTTTA ATGTGTCTAG ATTTTTATTA ATATGTCTGC TTTATATTAA 42146 .......... .......... .......... .......... .......... .......... 337 AATTTCATTT TTTTAAAAAA TAATAGGAAA ATTCTCAGAC CGTCCATAAA GAAAAATCAA 42206 .......... .......... .......... .......... .......... .......... 337 AATTAAATAG TTTCTTCTAT TCAAAATTAA GATGAGTTGT CACCATACTT TTAGAATTTT 42266 .......... .......... .......... .......... .......... .......... 337 TGATTTTTTT ATGCAAGAAT AAGACTTACG AGAACAAATG GTAATCAAAA TAAGATAGGA 42326 .......... .......... .......... .......... .......... .......... 337 AAAAGGGTCA AATTTCCTTT TTTTTTCGCC TAACTTATTT TATTAACTAA TTCATATTTA 42386 .......... .......... .......... .......... .......... .......... 337 GTTGTGTCTA AAACAGGTTT AACTGATAAA GGTTAAATAA AAAAAAATGT TACTACTGTG 42446 .......... .......... .......... .......... .......... .......... 337 TTGATTTATC AATTTTGGGT TATTGAATTA ACCGTCTTAG AATATTAGTT CAGCTTCCAA 42506 .......... .......... .......... .......... .......... .......... 337 TTTTAAAATT TTAGTTAATG ATTAAATCAA TAACCTAATA AAATTATATT AAAACTACTT 42566 .......... .......... .......... .......... .......... .......... 337 TTTTTTATTT TTATTTCTAT TTATATAATA ATGACTTTAT TTAAACTTCA AATACAAAAC 42626 .......... .......... .......... .......... .......... .......... 337 CTATTTTCTT TTGCATTTTA TAATCAATGT ATTGATGCTG ATGTGTTTTG TGCACTTGTT 42686 .......... .......... .......... .......... .......... .......... 337 AAAGTTGTGT TATTATATTA TTTTAATATT AATATAATAA ATGAAGCAGT GTTTTTGCTT 42746 .......... .......... .......... .......... .......... .......... 337 GTAAATTTCT AGATTTCTAT TTATGAAGTT CTGACTTAAA CGTATCTAAC GAATAATTAA 42806 .......... .......... .......... .......... .......... .......... 337 ATAAAAAATC AAGTATTTAA GGATCGATAG TTGATTATCT AAATTATTGA TCATTGATTT 42866 .......... .......... .......... .......... .......... .......... 337 AGCATGTTTA TAAATAAAAA ATCGATAAAC TAAACCACAA AATCTAACCA GTAAACATTG 42926 .......... .......... .......... .......... .......... .......... 337 AGACCATATC GAATACACCT ACAAGTAATT CATTAATAAG TTTCAAATTC AATATACAAC 42986 .......... .......... .......... .......... .......... .......... 337 AACAAAAAAA AAAGGCAAGA AAATGTTGAA GTAAAGTAAA TAACGACACA CGATTATTAA 43046 .......... .......... .......... .......... .......... .......... 337 AGATATTATT ATTTGTTCAT CAATGATCAA AATATATAAG TTGAAGGGAG TGTGTATACA 43106 .......... .......... .......... .......... .......... .......... 337 TTACACAAAT AAGATATTAT TATCTCACCC AACATAAATA GTTTAACAAA CCTTTTAAGA 43166 .......... .......... .......... .......... .......... .......... 337 TACTTATTGT TTTGGTAATT TTTCATACCA TATAATTTGT AGCAAAATAT GCTTTATATT 43226 .......... .......... .......... .......... .......... .......... 337 GTGGCATTAA TTATGGGCAA AAAACAACCT TATAATTTGT ACTATCACTA GGGCAAGCAA 43286 ||||| || .......... .......... .......... .......... .......... .-GCAAGTAA 345 ATGTGCTAGT AGCATCATCT TGTGGGTAGC TATAGGCATC AGGGCATCTC TGTTTGAAAA 43346 ||||||| || || ||| ||| |||||||||| |||| ||||| || ||||| | ||||||| ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA 405 ATTTCGACCA CTCAGTAGGA CTACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 43406 |||| ||| | ||| ||||| | |||||||| |||||||||| |||||||||| |||||||||| ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 465 ACGTGGTACA AGGATTGTTA CATCCTCCGG TTACTTTAAG TTGACTAGGG CATTCACCGT 43466 |||||||||| ||| |||||| |||||||| | ||||||||| | ||| |||||||| | ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACTTTAAG GGCGCGAGGA CATTCACCAT 525 TTATATTGGC GGTGCATTGA ATTGAGTGGC ATTTTCCTCC ACTGGAATTG GTTGTGGCGA 43526 |||||||||| ||||| ||| |||| ||| | |||||||||| ||| | || |||| ||| | TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA 585 AAGT 43530 |||| AAGT 589 hqPGS_C08HBa0235H18.1+_SGN-E254748- (40947 40984,43278 43530) ******************************************************************************** EST sequence 1099 -strand 499 n (File: SGN-E356548-) 1 TTTTTTTTTT TTACACATGA GATGTAACTC TTATTCCGGT CTTTAAGTTT GTTACGAACT 61 CTTATCAATA AAGTAAAAGT GAATATTTAA AAAACTGAGC TATTAAGATT TTTCATTACG 121 GTAGAGATCA GTTGACTAAT TGAGGCGATT TAAAATGAAG AAACTCAAAT TCACTTGGCC 181 ACTTCATCAG TACTTGCAGG CATCTCCAAG GGGAAATTTG GATCAGCAAC ACCATTAGGA 241 CAAAAGACAA CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT TGTAGGATCG 301 TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA CAACTCTGTA 361 GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT ACAAGGGTTG 421 TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT GGCCGTGCAA 481 TGAATTGCGT GACATTTTC Predicted gene structure (within gDNA segment 39109 to 44849): Exon 1 40947 40984 ( 38 n); cDNA 238 275 ( 38 n); score: 0.895 Intron 1 40985 43277 (2293 n); Pd: 0.925 (s: 0), Pa: 0.758 (s: 0.86) Exon 2 43278 43502 ( 225 n); cDNA 276 499 ( 224 n); score: 0.862 PPA cDNA 12 1 MATCH C08HBa0235H18.1+ SGN-E356548- 0.862 263 0.527 C PGS_C08HBa0235H18.1+_SGN-E356548- (40947 40984,43278 43502) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGG.. .......... .......... 275 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 .......... .......... .......... .......... .......... .......... 275 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 .......... .......... .......... .......... .......... .......... 275 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 .......... .......... .......... .......... .......... .......... 275 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 .......... .......... .......... .......... .......... .......... 275 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 .......... .......... .......... .......... .......... .......... 275 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 .......... .......... .......... .......... .......... .......... 275 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT ACGACCCCAT 41426 .......... .......... .......... .......... .......... .......... 275 ATACGTGCCA TCTTAGTGCC CCTCGGCGCA TTGATGACCC ATGTTTGGCC TCGATCGAGA 41486 .......... .......... .......... .......... .......... .......... 275 CGTCGACCAC CGCCTATCGG GGTCGATGCT GCCCAAACGG TGTAGGGACA ATTGTTGCGT 41546 .......... .......... .......... .......... .......... .......... 275 ACCTCGATAG TGGCAGCATA AGTGTAAGTC ACTAAAGCAA GGAAGAAGAA AATAAAAGAA 41606 .......... .......... .......... .......... .......... .......... 275 GATGTCAAGT AGCCCATGTT TGTGTACATA TTTTTGTTTA TTTTTGATAT ATAGTTACAT 41666 .......... .......... .......... .......... .......... .......... 275 ATTATTGGGT AGTTTATATA GGGGTGTGAC AACTTTTGGC ACCTTGCACA TTTAGAATTC 41726 .......... .......... .......... .......... .......... .......... 275 CACTATATAA GTTGTGGAAA TTTTTACCAT AAAGAATTAA ATGGATGGAA TGATCATATG 41786 .......... .......... .......... .......... .......... .......... 275 GAAAATTCCT CTAAAGGAGA AATTTACAAG CCACTTAAAT TGGAGGAGGA ATAGAGAAAG 41846 .......... .......... .......... .......... .......... .......... 275 TCATCACATG AAGTGATATT AATGACAATA TTATATAATT GTCTTTTAAT TTGTTAGCAA 41906 .......... .......... .......... .......... .......... .......... 275 CAATAAAAAA TTCATAGCTA ATTCCTAATC TGCAAAAATG ATTAATTCTT TATTTTCTAG 41966 .......... .......... .......... .......... .......... .......... 275 AGATTCAAAG TTAATTAATT ATAAAACTCT CCCAATGAAT TTAGAAAACA GGGAATGTTT 42026 .......... .......... .......... .......... .......... .......... 275 TTTGGTTCGT AGGCAAGAAA GTTTTTGGAA TTAAACACAA CAAAAATAAT CCTCATATCC 42086 .......... .......... .......... .......... .......... .......... 275 TATTTTTAAC TAATACTTTA ATGTGTCTAG ATTTTTATTA ATATGTCTGC TTTATATTAA 42146 .......... .......... .......... .......... .......... .......... 275 AATTTCATTT TTTTAAAAAA TAATAGGAAA ATTCTCAGAC CGTCCATAAA GAAAAATCAA 42206 .......... .......... .......... .......... .......... .......... 275 AATTAAATAG TTTCTTCTAT TCAAAATTAA GATGAGTTGT CACCATACTT TTAGAATTTT 42266 .......... .......... .......... .......... .......... .......... 275 TGATTTTTTT ATGCAAGAAT AAGACTTACG AGAACAAATG GTAATCAAAA TAAGATAGGA 42326 .......... .......... .......... .......... .......... .......... 275 AAAAGGGTCA AATTTCCTTT TTTTTTCGCC TAACTTATTT TATTAACTAA TTCATATTTA 42386 .......... .......... .......... .......... .......... .......... 275 GTTGTGTCTA AAACAGGTTT AACTGATAAA GGTTAAATAA AAAAAAATGT TACTACTGTG 42446 .......... .......... .......... .......... .......... .......... 275 TTGATTTATC AATTTTGGGT TATTGAATTA ACCGTCTTAG AATATTAGTT CAGCTTCCAA 42506 .......... .......... .......... .......... .......... .......... 275 TTTTAAAATT TTAGTTAATG ATTAAATCAA TAACCTAATA AAATTATATT AAAACTACTT 42566 .......... .......... .......... .......... .......... .......... 275 TTTTTTATTT TTATTTCTAT TTATATAATA ATGACTTTAT TTAAACTTCA AATACAAAAC 42626 .......... .......... .......... .......... .......... .......... 275 CTATTTTCTT TTGCATTTTA TAATCAATGT ATTGATGCTG ATGTGTTTTG TGCACTTGTT 42686 .......... .......... .......... .......... .......... .......... 275 AAAGTTGTGT TATTATATTA TTTTAATATT AATATAATAA ATGAAGCAGT GTTTTTGCTT 42746 .......... .......... .......... .......... .......... .......... 275 GTAAATTTCT AGATTTCTAT TTATGAAGTT CTGACTTAAA CGTATCTAAC GAATAATTAA 42806 .......... .......... .......... .......... .......... .......... 275 ATAAAAAATC AAGTATTTAA GGATCGATAG TTGATTATCT AAATTATTGA TCATTGATTT 42866 .......... .......... .......... .......... .......... .......... 275 AGCATGTTTA TAAATAAAAA ATCGATAAAC TAAACCACAA AATCTAACCA GTAAACATTG 42926 .......... .......... .......... .......... .......... .......... 275 AGACCATATC GAATACACCT ACAAGTAATT CATTAATAAG TTTCAAATTC AATATACAAC 42986 .......... .......... .......... .......... .......... .......... 275 AACAAAAAAA AAAGGCAAGA AAATGTTGAA GTAAAGTAAA TAACGACACA CGATTATTAA 43046 .......... .......... .......... .......... .......... .......... 275 AGATATTATT ATTTGTTCAT CAATGATCAA AATATATAAG TTGAAGGGAG TGTGTATACA 43106 .......... .......... .......... .......... .......... .......... 275 TTACACAAAT AAGATATTAT TATCTCACCC AACATAAATA GTTTAACAAA CCTTTTAAGA 43166 .......... .......... .......... .......... .......... .......... 275 TACTTATTGT TTTGGTAATT TTTCATACCA TATAATTTGT AGCAAAATAT GCTTTATATT 43226 .......... .......... .......... .......... .......... .......... 275 GTGGCATTAA TTATGGGCAA AAAACAACCT TATAATTTGT ACTATCACTA GGGCAAGCAA 43286 ||||| || .......... .......... .......... .......... .......... .-GCAAGTAA 283 ATGTGCTAGT AGCATCATCT TGTGGGTAGC TATAGGCATC AGGGCATCTC TGTTTGAAAA 43346 ||||||| || || ||| ||| |||||||||| |||| ||||| || ||||| | ||||||| ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA 343 ATTTCGACCA CTCAGTAGGA CTACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 43406 |||| ||| | ||| ||||| | |||||||| |||||||||| |||||||||| |||||||||| ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 403 ACGTGGTACA AGGATTGTTA CATCCTCCGG TTACTTTAAG TTGACTAGGG CATTCACCGT 43466 |||||||||| ||| |||||| |||||||| | ||| ||||| | ||| |||||||| | ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT 463 TTATATTGGC GGTGCATTGA ATTGAGTGGC ATTTTC 43502 |||||||||| ||||| ||| |||| ||| | |||||| TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTC 499 hqPGS_C08HBa0235H18.1+_SGN-E356548- (40947 40984,43278 43502) ******************************************************************************** EST sequence 236 +strand 528 n (File: SGN-E298580+) 1 AGAACTAGTC TCGAGTTTTT TTTTTTTTTT TTTTTTTTGC AAACGCACTG TTGTTTTATA 61 CATCTAAGAC AAAAGTACAC ATGAGATGTA ACTCTTATTC CGGTCTTTAA GTTTGTTACG 121 AACTCTTATC AATAAAGTAA AAGTGAATAT TTAAAAAACT GAGCTATTAA GATTTTTCAT 181 TACGGTAGAG ATCAGTTGAC TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT 241 GGCCACTTCA TCAGTACTTG CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT 301 AGGACAAAAG ACAACCCTAT AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG 361 ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC 421 TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG 481 GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATT Predicted gene structure (within gDNA segment 38479 to 44509): Exon 1 40947 40984 ( 38 n); cDNA 302 339 ( 38 n); score: 0.895 Intron 1 40985 43277 (2293 n); Pd: 0.925 (s: 0), Pa: 0.758 (s: 0.86) Exon 2 43278 43467 ( 190 n); cDNA 340 528 ( 189 n); score: 0.858 PPA cDNA 38 15 MATCH C08HBa0235H18.1+ SGN-E298580+ 0.858 228 0.432 C PGS_C08HBa0235H18.1+_SGN-E298580+ (40947 40984,43278 43467) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGG.. .......... .......... 339 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 .......... .......... .......... .......... .......... .......... 339 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 .......... .......... .......... .......... .......... .......... 339 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 .......... .......... .......... .......... .......... .......... 339 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 .......... .......... .......... .......... .......... .......... 339 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 .......... .......... .......... .......... .......... .......... 339 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 .......... .......... .......... .......... .......... .......... 339 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT ACGACCCCAT 41426 .......... .......... .......... .......... .......... .......... 339 ATACGTGCCA TCTTAGTGCC CCTCGGCGCA TTGATGACCC ATGTTTGGCC TCGATCGAGA 41486 .......... .......... .......... .......... .......... .......... 339 CGTCGACCAC CGCCTATCGG GGTCGATGCT GCCCAAACGG TGTAGGGACA ATTGTTGCGT 41546 .......... .......... .......... .......... .......... .......... 339 ACCTCGATAG TGGCAGCATA AGTGTAAGTC ACTAAAGCAA GGAAGAAGAA AATAAAAGAA 41606 .......... .......... .......... .......... .......... .......... 339 GATGTCAAGT AGCCCATGTT TGTGTACATA TTTTTGTTTA TTTTTGATAT ATAGTTACAT 41666 .......... .......... .......... .......... .......... .......... 339 ATTATTGGGT AGTTTATATA GGGGTGTGAC AACTTTTGGC ACCTTGCACA TTTAGAATTC 41726 .......... .......... .......... .......... .......... .......... 339 CACTATATAA GTTGTGGAAA TTTTTACCAT AAAGAATTAA ATGGATGGAA TGATCATATG 41786 .......... .......... .......... .......... .......... .......... 339 GAAAATTCCT CTAAAGGAGA AATTTACAAG CCACTTAAAT TGGAGGAGGA ATAGAGAAAG 41846 .......... .......... .......... .......... .......... .......... 339 TCATCACATG AAGTGATATT AATGACAATA TTATATAATT GTCTTTTAAT TTGTTAGCAA 41906 .......... .......... .......... .......... .......... .......... 339 CAATAAAAAA TTCATAGCTA ATTCCTAATC TGCAAAAATG ATTAATTCTT TATTTTCTAG 41966 .......... .......... .......... .......... .......... .......... 339 AGATTCAAAG TTAATTAATT ATAAAACTCT CCCAATGAAT TTAGAAAACA GGGAATGTTT 42026 .......... .......... .......... .......... .......... .......... 339 TTTGGTTCGT AGGCAAGAAA GTTTTTGGAA TTAAACACAA CAAAAATAAT CCTCATATCC 42086 .......... .......... .......... .......... .......... .......... 339 TATTTTTAAC TAATACTTTA ATGTGTCTAG ATTTTTATTA ATATGTCTGC TTTATATTAA 42146 .......... .......... .......... .......... .......... .......... 339 AATTTCATTT TTTTAAAAAA TAATAGGAAA ATTCTCAGAC CGTCCATAAA GAAAAATCAA 42206 .......... .......... .......... .......... .......... .......... 339 AATTAAATAG TTTCTTCTAT TCAAAATTAA GATGAGTTGT CACCATACTT TTAGAATTTT 42266 .......... .......... .......... .......... .......... .......... 339 TGATTTTTTT ATGCAAGAAT AAGACTTACG AGAACAAATG GTAATCAAAA TAAGATAGGA 42326 .......... .......... .......... .......... .......... .......... 339 AAAAGGGTCA AATTTCCTTT TTTTTTCGCC TAACTTATTT TATTAACTAA TTCATATTTA 42386 .......... .......... .......... .......... .......... .......... 339 GTTGTGTCTA AAACAGGTTT AACTGATAAA GGTTAAATAA AAAAAAATGT TACTACTGTG 42446 .......... .......... .......... .......... .......... .......... 339 TTGATTTATC AATTTTGGGT TATTGAATTA ACCGTCTTAG AATATTAGTT CAGCTTCCAA 42506 .......... .......... .......... .......... .......... .......... 339 TTTTAAAATT TTAGTTAATG ATTAAATCAA TAACCTAATA AAATTATATT AAAACTACTT 42566 .......... .......... .......... .......... .......... .......... 339 TTTTTTATTT TTATTTCTAT TTATATAATA ATGACTTTAT TTAAACTTCA AATACAAAAC 42626 .......... .......... .......... .......... .......... .......... 339 CTATTTTCTT TTGCATTTTA TAATCAATGT ATTGATGCTG ATGTGTTTTG TGCACTTGTT 42686 .......... .......... .......... .......... .......... .......... 339 AAAGTTGTGT TATTATATTA TTTTAATATT AATATAATAA ATGAAGCAGT GTTTTTGCTT 42746 .......... .......... .......... .......... .......... .......... 339 GTAAATTTCT AGATTTCTAT TTATGAAGTT CTGACTTAAA CGTATCTAAC GAATAATTAA 42806 .......... .......... .......... .......... .......... .......... 339 ATAAAAAATC AAGTATTTAA GGATCGATAG TTGATTATCT AAATTATTGA TCATTGATTT 42866 .......... .......... .......... .......... .......... .......... 339 AGCATGTTTA TAAATAAAAA ATCGATAAAC TAAACCACAA AATCTAACCA GTAAACATTG 42926 .......... .......... .......... .......... .......... .......... 339 AGACCATATC GAATACACCT ACAAGTAATT CATTAATAAG TTTCAAATTC AATATACAAC 42986 .......... .......... .......... .......... .......... .......... 339 AACAAAAAAA AAAGGCAAGA AAATGTTGAA GTAAAGTAAA TAACGACACA CGATTATTAA 43046 .......... .......... .......... .......... .......... .......... 339 AGATATTATT ATTTGTTCAT CAATGATCAA AATATATAAG TTGAAGGGAG TGTGTATACA 43106 .......... .......... .......... .......... .......... .......... 339 TTACACAAAT AAGATATTAT TATCTCACCC AACATAAATA GTTTAACAAA CCTTTTAAGA 43166 .......... .......... .......... .......... .......... .......... 339 TACTTATTGT TTTGGTAATT TTTCATACCA TATAATTTGT AGCAAAATAT GCTTTATATT 43226 .......... .......... .......... .......... .......... .......... 339 GTGGCATTAA TTATGGGCAA AAAACAACCT TATAATTTGT ACTATCACTA GGGCAAGCAA 43286 ||||| || .......... .......... .......... .......... .......... .-GCAAGTAA 347 ATGTGCTAGT AGCATCATCT TGTGGGTAGC TATAGGCATC AGGGCATCTC TGTTTGAAAA 43346 ||||||| || || ||| ||| |||||||||| |||| ||||| || ||||| | ||||||| ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA 407 ATTTCGACCA CTCAGTAGGA CTACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 43406 |||| ||| | ||| ||||| | |||||||| |||||||||| |||||||||| |||||||||| ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 467 ACGTGGTACA AGGATTGTTA CATCCTCCGG TTACTTTAAG TTGACTAGGG CATTCACCGT 43466 |||||||||| ||| |||||| |||||||| | ||| ||||| | ||| |||||||| | ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT 527 T 43467 | T 528 hqPGS_C08HBa0235H18.1+_SGN-E298580+ (40947 40984,43278 43467) ******************************************************************************** EST sequence 322 +strand 486 n (File: SGN-E276361+) 1 GAGAACTAGT CTCGAGTTTT TTTTTTTTTT TTTTACACAT GAGATGTAAC TCTTATTCCG 61 GTCTTTAAGT TTGTTACGAA CTCTTATCAA TAAAGTAAAA GTGAATATTT AAAAAACTGA 121 GCTATTAAGA TTTTTCATTA CGGTAGAGAT CAGTTGACTA ATTGAGGCGA TTTAAAATGA 181 AGAAACTCAA ATTCACTTGG CCACTTCATC AGTACTTGCA GGCATCTCCA AGGGGAAATT 241 TGGATCAGCA ACACCATTAG GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA 301 AGTAAATGTG CTTGTAGGAT CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT 361 GAAAAATTTG GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC 421 TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC 481 ACCATT Predicted gene structure (within gDNA segment 38899 to 44509): Exon 1 40947 40984 ( 38 n); cDNA 260 297 ( 38 n); score: 0.895 Intron 1 40985 43277 (2293 n); Pd: 0.925 (s: 0), Pa: 0.758 (s: 0.86) Exon 2 43278 43467 ( 190 n); cDNA 298 486 ( 189 n); score: 0.858 PPA cDNA 34 16 MATCH C08HBa0235H18.1+ SGN-E276361+ 0.858 228 0.469 C PGS_C08HBa0235H18.1+_SGN-E276361+ (40947 40984,43278 43467) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGG.. .......... .......... 297 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 .......... .......... .......... .......... .......... .......... 297 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 .......... .......... .......... .......... .......... .......... 297 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 .......... .......... .......... .......... .......... .......... 297 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 .......... .......... .......... .......... .......... .......... 297 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 .......... .......... .......... .......... .......... .......... 297 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 .......... .......... .......... .......... .......... .......... 297 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT ACGACCCCAT 41426 .......... .......... .......... .......... .......... .......... 297 ATACGTGCCA TCTTAGTGCC CCTCGGCGCA TTGATGACCC ATGTTTGGCC TCGATCGAGA 41486 .......... .......... .......... .......... .......... .......... 297 CGTCGACCAC CGCCTATCGG GGTCGATGCT GCCCAAACGG TGTAGGGACA ATTGTTGCGT 41546 .......... .......... .......... .......... .......... .......... 297 ACCTCGATAG TGGCAGCATA AGTGTAAGTC ACTAAAGCAA GGAAGAAGAA AATAAAAGAA 41606 .......... .......... .......... .......... .......... .......... 297 GATGTCAAGT AGCCCATGTT TGTGTACATA TTTTTGTTTA TTTTTGATAT ATAGTTACAT 41666 .......... .......... .......... .......... .......... .......... 297 ATTATTGGGT AGTTTATATA GGGGTGTGAC AACTTTTGGC ACCTTGCACA TTTAGAATTC 41726 .......... .......... .......... .......... .......... .......... 297 CACTATATAA GTTGTGGAAA TTTTTACCAT AAAGAATTAA ATGGATGGAA TGATCATATG 41786 .......... .......... .......... .......... .......... .......... 297 GAAAATTCCT CTAAAGGAGA AATTTACAAG CCACTTAAAT TGGAGGAGGA ATAGAGAAAG 41846 .......... .......... .......... .......... .......... .......... 297 TCATCACATG AAGTGATATT AATGACAATA TTATATAATT GTCTTTTAAT TTGTTAGCAA 41906 .......... .......... .......... .......... .......... .......... 297 CAATAAAAAA TTCATAGCTA ATTCCTAATC TGCAAAAATG ATTAATTCTT TATTTTCTAG 41966 .......... .......... .......... .......... .......... .......... 297 AGATTCAAAG TTAATTAATT ATAAAACTCT CCCAATGAAT TTAGAAAACA GGGAATGTTT 42026 .......... .......... .......... .......... .......... .......... 297 TTTGGTTCGT AGGCAAGAAA GTTTTTGGAA TTAAACACAA CAAAAATAAT CCTCATATCC 42086 .......... .......... .......... .......... .......... .......... 297 TATTTTTAAC TAATACTTTA ATGTGTCTAG ATTTTTATTA ATATGTCTGC TTTATATTAA 42146 .......... .......... .......... .......... .......... .......... 297 AATTTCATTT TTTTAAAAAA TAATAGGAAA ATTCTCAGAC CGTCCATAAA GAAAAATCAA 42206 .......... .......... .......... .......... .......... .......... 297 AATTAAATAG TTTCTTCTAT TCAAAATTAA GATGAGTTGT CACCATACTT TTAGAATTTT 42266 .......... .......... .......... .......... .......... .......... 297 TGATTTTTTT ATGCAAGAAT AAGACTTACG AGAACAAATG GTAATCAAAA TAAGATAGGA 42326 .......... .......... .......... .......... .......... .......... 297 AAAAGGGTCA AATTTCCTTT TTTTTTCGCC TAACTTATTT TATTAACTAA TTCATATTTA 42386 .......... .......... .......... .......... .......... .......... 297 GTTGTGTCTA AAACAGGTTT AACTGATAAA GGTTAAATAA AAAAAAATGT TACTACTGTG 42446 .......... .......... .......... .......... .......... .......... 297 TTGATTTATC AATTTTGGGT TATTGAATTA ACCGTCTTAG AATATTAGTT CAGCTTCCAA 42506 .......... .......... .......... .......... .......... .......... 297 TTTTAAAATT TTAGTTAATG ATTAAATCAA TAACCTAATA AAATTATATT AAAACTACTT 42566 .......... .......... .......... .......... .......... .......... 297 TTTTTTATTT TTATTTCTAT TTATATAATA ATGACTTTAT TTAAACTTCA AATACAAAAC 42626 .......... .......... .......... .......... .......... .......... 297 CTATTTTCTT TTGCATTTTA TAATCAATGT ATTGATGCTG ATGTGTTTTG TGCACTTGTT 42686 .......... .......... .......... .......... .......... .......... 297 AAAGTTGTGT TATTATATTA TTTTAATATT AATATAATAA ATGAAGCAGT GTTTTTGCTT 42746 .......... .......... .......... .......... .......... .......... 297 GTAAATTTCT AGATTTCTAT TTATGAAGTT CTGACTTAAA CGTATCTAAC GAATAATTAA 42806 .......... .......... .......... .......... .......... .......... 297 ATAAAAAATC AAGTATTTAA GGATCGATAG TTGATTATCT AAATTATTGA TCATTGATTT 42866 .......... .......... .......... .......... .......... .......... 297 AGCATGTTTA TAAATAAAAA ATCGATAAAC TAAACCACAA AATCTAACCA GTAAACATTG 42926 .......... .......... .......... .......... .......... .......... 297 AGACCATATC GAATACACCT ACAAGTAATT CATTAATAAG TTTCAAATTC AATATACAAC 42986 .......... .......... .......... .......... .......... .......... 297 AACAAAAAAA AAAGGCAAGA AAATGTTGAA GTAAAGTAAA TAACGACACA CGATTATTAA 43046 .......... .......... .......... .......... .......... .......... 297 AGATATTATT ATTTGTTCAT CAATGATCAA AATATATAAG TTGAAGGGAG TGTGTATACA 43106 .......... .......... .......... .......... .......... .......... 297 TTACACAAAT AAGATATTAT TATCTCACCC AACATAAATA GTTTAACAAA CCTTTTAAGA 43166 .......... .......... .......... .......... .......... .......... 297 TACTTATTGT TTTGGTAATT TTTCATACCA TATAATTTGT AGCAAAATAT GCTTTATATT 43226 .......... .......... .......... .......... .......... .......... 297 GTGGCATTAA TTATGGGCAA AAAACAACCT TATAATTTGT ACTATCACTA GGGCAAGCAA 43286 ||||| || .......... .......... .......... .......... .......... .-GCAAGTAA 305 ATGTGCTAGT AGCATCATCT TGTGGGTAGC TATAGGCATC AGGGCATCTC TGTTTGAAAA 43346 ||||||| || || ||| ||| |||||||||| |||| ||||| || ||||| | ||||||| ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA 365 ATTTCGACCA CTCAGTAGGA CTACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 43406 |||| ||| | ||| ||||| | |||||||| |||||||||| |||||||||| |||||||||| ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 425 ACGTGGTACA AGGATTGTTA CATCCTCCGG TTACTTTAAG TTGACTAGGG CATTCACCGT 43466 |||||||||| ||| |||||| |||||||| | ||| ||||| | ||| |||||||| | ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT 485 T 43467 | T 486 hqPGS_C08HBa0235H18.1+_SGN-E276361+ (40947 40984,43278 43467) ******************************************************************************** EST sequence 125 +strand 431 n (File: SGN-E261117+) 1 TTTTTTTTTT TTTTTTTACC ATGAGATGTA ACTCTTATTC CGGTCTTTAA GTTTGTTACG 61 AACTCTTATC AATAAAGTAA AAGTGAATAT TTAAAAAACT GAGCTATTAA GATTTTTCAT 121 TACGGTAGAG ATCAGTTGAC TAATTGAGGC GATTTAAAAT GAAGAAACTC AAATTCACTT 181 GGCCACTTCA TCAGAACTTG CAGGCATCTC CAAGGGGAAA TTTGGATCAG CAACACCATT 241 AGGACAAAAG ACAACCCTAT AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG 301 ATCGGCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC 361 TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG 421 GTTGGTACAT C Predicted gene structure (within gDNA segment 39079 to 44139): Exon 1 40947 40984 ( 38 n); cDNA 242 279 ( 38 n); score: 0.895 Intron 1 40985 43277 (2293 n); Pd: 0.925 (s: 0), Pa: 0.758 (s: 0.84) Exon 2 43278 43430 ( 153 n); cDNA 280 431 ( 152 n); score: 0.876 PPA cDNA 17 1 MATCH C08HBa0235H18.1+ SGN-E261117+ 0.876 191 0.443 C PGS_C08HBa0235H18.1+_SGN-E261117+ (40947 40984,43278 43430) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGG.. .......... .......... 279 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 .......... .......... .......... .......... .......... .......... 279 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 .......... .......... .......... .......... .......... .......... 279 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 .......... .......... .......... .......... .......... .......... 279 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 .......... .......... .......... .......... .......... .......... 279 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 .......... .......... .......... .......... .......... .......... 279 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 .......... .......... .......... .......... .......... .......... 279 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT ACGACCCCAT 41426 .......... .......... .......... .......... .......... .......... 279 ATACGTGCCA TCTTAGTGCC CCTCGGCGCA TTGATGACCC ATGTTTGGCC TCGATCGAGA 41486 .......... .......... .......... .......... .......... .......... 279 CGTCGACCAC CGCCTATCGG GGTCGATGCT GCCCAAACGG TGTAGGGACA ATTGTTGCGT 41546 .......... .......... .......... .......... .......... .......... 279 ACCTCGATAG TGGCAGCATA AGTGTAAGTC ACTAAAGCAA GGAAGAAGAA AATAAAAGAA 41606 .......... .......... .......... .......... .......... .......... 279 GATGTCAAGT AGCCCATGTT TGTGTACATA TTTTTGTTTA TTTTTGATAT ATAGTTACAT 41666 .......... .......... .......... .......... .......... .......... 279 ATTATTGGGT AGTTTATATA GGGGTGTGAC AACTTTTGGC ACCTTGCACA TTTAGAATTC 41726 .......... .......... .......... .......... .......... .......... 279 CACTATATAA GTTGTGGAAA TTTTTACCAT AAAGAATTAA ATGGATGGAA TGATCATATG 41786 .......... .......... .......... .......... .......... .......... 279 GAAAATTCCT CTAAAGGAGA AATTTACAAG CCACTTAAAT TGGAGGAGGA ATAGAGAAAG 41846 .......... .......... .......... .......... .......... .......... 279 TCATCACATG AAGTGATATT AATGACAATA TTATATAATT GTCTTTTAAT TTGTTAGCAA 41906 .......... .......... .......... .......... .......... .......... 279 CAATAAAAAA TTCATAGCTA ATTCCTAATC TGCAAAAATG ATTAATTCTT TATTTTCTAG 41966 .......... .......... .......... .......... .......... .......... 279 AGATTCAAAG TTAATTAATT ATAAAACTCT CCCAATGAAT TTAGAAAACA GGGAATGTTT 42026 .......... .......... .......... .......... .......... .......... 279 TTTGGTTCGT AGGCAAGAAA GTTTTTGGAA TTAAACACAA CAAAAATAAT CCTCATATCC 42086 .......... .......... .......... .......... .......... .......... 279 TATTTTTAAC TAATACTTTA ATGTGTCTAG ATTTTTATTA ATATGTCTGC TTTATATTAA 42146 .......... .......... .......... .......... .......... .......... 279 AATTTCATTT TTTTAAAAAA TAATAGGAAA ATTCTCAGAC CGTCCATAAA GAAAAATCAA 42206 .......... .......... .......... .......... .......... .......... 279 AATTAAATAG TTTCTTCTAT TCAAAATTAA GATGAGTTGT CACCATACTT TTAGAATTTT 42266 .......... .......... .......... .......... .......... .......... 279 TGATTTTTTT ATGCAAGAAT AAGACTTACG AGAACAAATG GTAATCAAAA TAAGATAGGA 42326 .......... .......... .......... .......... .......... .......... 279 AAAAGGGTCA AATTTCCTTT TTTTTTCGCC TAACTTATTT TATTAACTAA TTCATATTTA 42386 .......... .......... .......... .......... .......... .......... 279 GTTGTGTCTA AAACAGGTTT AACTGATAAA GGTTAAATAA AAAAAAATGT TACTACTGTG 42446 .......... .......... .......... .......... .......... .......... 279 TTGATTTATC AATTTTGGGT TATTGAATTA ACCGTCTTAG AATATTAGTT CAGCTTCCAA 42506 .......... .......... .......... .......... .......... .......... 279 TTTTAAAATT TTAGTTAATG ATTAAATCAA TAACCTAATA AAATTATATT AAAACTACTT 42566 .......... .......... .......... .......... .......... .......... 279 TTTTTTATTT TTATTTCTAT TTATATAATA ATGACTTTAT TTAAACTTCA AATACAAAAC 42626 .......... .......... .......... .......... .......... .......... 279 CTATTTTCTT TTGCATTTTA TAATCAATGT ATTGATGCTG ATGTGTTTTG TGCACTTGTT 42686 .......... .......... .......... .......... .......... .......... 279 AAAGTTGTGT TATTATATTA TTTTAATATT AATATAATAA ATGAAGCAGT GTTTTTGCTT 42746 .......... .......... .......... .......... .......... .......... 279 GTAAATTTCT AGATTTCTAT TTATGAAGTT CTGACTTAAA CGTATCTAAC GAATAATTAA 42806 .......... .......... .......... .......... .......... .......... 279 ATAAAAAATC AAGTATTTAA GGATCGATAG TTGATTATCT AAATTATTGA TCATTGATTT 42866 .......... .......... .......... .......... .......... .......... 279 AGCATGTTTA TAAATAAAAA ATCGATAAAC TAAACCACAA AATCTAACCA GTAAACATTG 42926 .......... .......... .......... .......... .......... .......... 279 AGACCATATC GAATACACCT ACAAGTAATT CATTAATAAG TTTCAAATTC AATATACAAC 42986 .......... .......... .......... .......... .......... .......... 279 AACAAAAAAA AAAGGCAAGA AAATGTTGAA GTAAAGTAAA TAACGACACA CGATTATTAA 43046 .......... .......... .......... .......... .......... .......... 279 AGATATTATT ATTTGTTCAT CAATGATCAA AATATATAAG TTGAAGGGAG TGTGTATACA 43106 .......... .......... .......... .......... .......... .......... 279 TTACACAAAT AAGATATTAT TATCTCACCC AACATAAATA GTTTAACAAA CCTTTTAAGA 43166 .......... .......... .......... .......... .......... .......... 279 TACTTATTGT TTTGGTAATT TTTCATACCA TATAATTTGT AGCAAAATAT GCTTTATATT 43226 .......... .......... .......... .......... .......... .......... 279 GTGGCATTAA TTATGGGCAA AAAACAACCT TATAATTTGT ACTATCACTA GGGCAAGCAA 43286 ||||| || .......... .......... .......... .......... .......... .-GCAAGTAA 287 ATGTGCTAGT AGCATCATCT TGTGGGTAGC TATAGGCATC AGGGCATCTC TGTTTGAAAA 43346 ||||||| || || ||| || |||||||||| |||| ||||| || ||||| | ||||||| ATGTGCTTGT AGGATCGGCT TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA 347 ATTTCGACCA CTCAGTAGGA CTACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 43406 |||| ||| | ||| ||||| | |||||||| |||||||||| |||||||||| |||||||||| ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA 407 ACGTGGTACA AGGATTGTTA CATC 43430 |||||||||| ||| ||| || |||| ACGTGGTACA AGGGTTGGTA CATC 431 hqPGS_C08HBa0235H18.1+_SGN-E261117+ (40947 40984,43278 43430) ******************************************************************************** EST sequence 883 -strand 353 n (File: SGN-E337179-) 1 TTTTTTTTTT TTTTTTTTTT GTTCTTTTTT TTTTTTTTTT TNNAAGCAGA CCGTTTAAGA 61 TGCTTATTAT TTTGGTAATT TTTTCATACC ATTCAATTTG TAGCAAAATA TGCTTTATTG 121 TGGCATCAAT TATGGGCAAA AAACAACCCT ATAATTTGTA CTACCACTAG GGCAAGTGAA 181 TAAGCTAGTA GGATCATCTT GAGGGTAGCT ATACGCATTA GGGCACCTTT GTTTGAAAAA 241 TCTCGAAAAT TTTGTAGGAC CACATGGGCC TTGAGTACAA CAATATTGTT GTCCTCCGAA 301 CGTGGTACAA GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GGACTAGGGC ATA Predicted gene structure (within gDNA segment 39808 to 41775): Exon 1 40860 41165 ( 306 n); cDNA 47 352 ( 306 n); score: 1.000 PPA cDNA 41 22 MATCH C08HBa0235H18.1+ SGN-E337179- 1.000 306 0.867 C PGS_C08HBa0235H18.1+_SGN-E337179- (40860 41165) Alignment (genomic DNA sequence = upper lines): CAGACCGTTT AAGATGCTTA TTATTTTGGT AATTTTTTCA TACCATTCAA TTTGTAGCAA 40919 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGACCGTTT AAGATGCTTA TTATTTTGGT AATTTTTTCA TACCATTCAA TTTGTAGCAA 106 AATATGCTTT ATTGTGGCAT CAATTATGGG CAAAAAACAA CCCTATAATT TGTACTACCA 40979 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATATGCTTT ATTGTGGCAT CAATTATGGG CAAAAAACAA CCCTATAATT TGTACTACCA 166 CTAGGGCAAG TGAATAAGCT AGTAGGATCA TCTTGAGGGT AGCTATACGC ATTAGGGCAC 41039 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAGGGCAAG TGAATAAGCT AGTAGGATCA TCTTGAGGGT AGCTATACGC ATTAGGGCAC 226 CTTTGTTTGA AAAATCTCGA AAATTTTGTA GGACCACATG GGCCTTGAGT ACAACAATAT 41099 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTGTTTGA AAAATCTCGA AAATTTTGTA GGACCACATG GGCCTTGAGT ACAACAATAT 286 TGTTGTCCTC CGAACGTGGT ACAAGGGTTG TTACATCCTC CGGGTACCCT AAGTGGACTA 41159 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTGTCCTC CGAACGTGGT ACAAGGGTTG TTACATCCTC CGGGTACCCT AAGTGGACTA 346 GGGCAT 41165 |||||| GGGCAT 352 hqPGS_C08HBa0235H18.1+_SGN-E337179- (40860 41165) ******************************************************************************** EST sequence 532 -strand 787 n (File: SGN-E340366-) 1 CAAGCCAATT ATATAACTCG ATTACTTCAA GCAATTTAAA AGAAAGTGAC TCAATTTTAC 61 TTAGCCTCTT CATCACTTGA GGGCATCTCC AAGGGGAAAT TTGGGCTAGT AACACCATTA 121 GGACAAAAAA CAACCCNTAT AATTTGTACT ACCACTAGGG CAAGTAAATG TGCTAGTAGG 181 ATCATCTTGT GGGTAGCTAT ACGCATCAGG ACATCTTTGT TTAAAAATCT CGACAAATCA 241 GTAGGGCCAC ATGGACCTTG TGTGCAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGA 301 TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGACATT CACCATTTAT ATTAGCCGTA 361 CAATGAATTG CATGGCATTT CCCTCCACTA GGATTGGTCG GGGCGAAAGT CATTGGAATA 421 TTAAATCCAT CGACTAAAGA AATGTCCCAG AAATCTAGGT TGCTAAACTG GTCCAAGGCG 481 TACTCGGCCA GGGTGTTTGG TGGTTTGCCC CACCCGGTAC ATTGCAAGAC CCCACCACAA 541 TCACCAGTCT GACATGAACC TCTACCAGCA CCATCAAAGT TGCAATTCGT ACGACCCCAT 601 ATACGTGCCA TCTTAGTGCC CCTCGGTGCA TTGATGACCC ATGTTTGGCC TCGATCAAGA 661 CGTCGACCAC CGCCTATTGG GGTCGACGCC GCCCAGACGG TGTATGGACA GTTGTTGCGT 721 ACCTCGAAAG TGGCAGCATA AGTGTAAGTC ACAAAAGCAA GAAGGAAGAA AACAAAAGAA 781 GATCTCA Predicted gene structure (within gDNA segment 38983 to 42528): Exon 1 40919 41613 ( 695 n); cDNA 97 787 ( 691 n); score: 0.894 MATCH C08HBa0235H18.1+ SGN-E340366- 0.894 695 0.883 C PGS_C08HBa0235H18.1+_SGN-E340366- (40919 41613) Alignment (genomic DNA sequence = upper lines): AAATATGCTT TATTGTGGCA TCAATTATGG GCAAAAAACA ACCC-TATAA TTTGTACTAC 40977 |||| || || || || | |||| || ||||||||| |||| ||||| |||||||||| AAATTTGGGC TA--GTAACA -CCATTA-GG ACAAAAAACA ACCCNTATAA TTTGTACTAC 152 CACTAGGGCA AGTGAATAAG CTAGTAGGAT CATCTTGAGG GTAGCTATAC GCATTAGGGC 41037 |||||||||| ||| ||| | |||||||||| ||||||| || |||||||||| |||| ||| | CACTAGGGCA AGTAAATGTG CTAGTAGGAT CATCTTGTGG GTAGCTATAC GCATCAGGAC 212 ACCTTTGTTT GAAAAATCTC GAAAATTTTG TAGGACCACA TGGGCCTTGA GTACAACAAT 41097 | |||||||| ||||||||| || || | | |||| ||||| ||| ||||| || ||||||| ATCTTTGTTT -AAAAATCTC GACAAATCAG TAGGGCCACA TGGACCTTGT GTGCAACAAT 271 ATTGTTGTCC TCCGAACGTG GTACAAGGGT TGTTACATCC TCCGGGTACC CTAAGTGGAC 41157 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| ||||||| || ATTGTTGTCC TCCGAACGTG GTACAAGGAT TGTTACATCC TCCGGGTACC CTAAGTGAAC 331 TAGGGCATTC ACCGTTTATA TTAGCCGTGC AATGAATTGC ATGGCATTTT CCTCCACTAG 41217 ||| ||||| ||| |||||| |||||||| | |||||||||| ||||||||| |||||||||| CAGGACATTC ACCATTTATA TTAGCCGTAC AATGAATTGC ATGGCATTTC CCTCCACTAG 391 GATTGGTTGG GGCGAAAGTC ATCGGTATAT TAAATCCGTC AACCAAAGAA ATGTCCCAGA 41277 ||||||| || |||||||||| || || |||| ||||||| || || |||||| |||||||||| GATTGGTCGG GGCGAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA ATGTCCCAGA 451 AATCTAGGTT GCTGAATTGG TCCAAAGCAT ATTCAGCTAG GGTGTTTGGG GGTTTGCCCC 41337 |||||||||| ||| || ||| ||||| || | | || || || ||||||||| |||||||||| AATCTAGGTT GCTAAACTGG TCCAAGGCGT ACTCGGCCAG GGTGTTTGGT GGTTTGCCCC 511 ACCCGGTACA GTGTAGGACC CCACCACAAT CACCAGTTTG GCATGAACCT CTACCAGCAC 41397 |||||||||| || | |||| |||||||||| ||||||| || ||||||||| |||||||||| ACCCGGTACA TTGCAAGACC CCACCACAAT CACCAGTCTG ACATGAACCT CTACCAGCAC 571 CATTAAAATT GCAATTAGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC CTCGGCGCAT 41457 ||| ||| || |||||| ||| |||||||||| |||||||||| |||||||||| ||||| |||| CATCAAAGTT GCAATTCGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC CTCGGTGCAT 631 TGATGACCCA TGTTTGGCCT CGATCGAGAC GTCGACCACC GCCTATCGGG GTCGATGCTG 41517 |||||||||| |||||||||| ||||| |||| |||||||||| |||||| ||| ||||| || | TGATGACCCA TGTTTGGCCT CGATCAAGAC GTCGACCACC GCCTATTGGG GTCGACGCCG 691 CCCAAACGGT GTAGGGACAA TTGTTGCGTA CCTCGATAGT GGCAGCATAA GTGTAAGTCA 41577 |||| ||||| ||| ||||| |||||||||| |||||| ||| |||||||||| |||||||||| CCCAGACGGT GTATGGACAG TTGTTGCGTA CCTCGAAAGT GGCAGCATAA GTGTAAGTCA 751 CTAAAGCAAG GAAGAAGAAA ATAAAAGAAG ATGTCA 41613 | |||||||| | ||||||| | |||||||| || ||| CAAAAGCAAG AAGGAAGAAA ACAAAAGAAG ATCTCA 787 hqPGS_C08HBa0235H18.1+_SGN-E340366- (40919 41613) ******************************************************************************** EST sequence 167 +strand 803 n (File: SGN-E540205+) 1 TTTTTTTTTT GTGATGATGT GACTTTTATT CATGTAATTA TATTAGGTTT ATTACAAGCC 61 AATTATATAA CTCGACTACT TCAAGCAATT TAAAAGAAAG TGACTCAATT TTACTTAGCC 121 TCTTCATCAC TTGAGGGCAT CTCCAAGGGG AAATTTGGGC TAGTAACACC ATTAGGACAA 181 AAAACAACCC TATAATTTGT ACTACCACTA GGGCAAGTAA ATGTGCTAGT AGGATCATCT 241 TGTGGGTAGC TATACGCATC AGGACATCTT TGTTTGAAAA ATCTCGACAA ATCAGTAGGG 301 CCACATGGAC CTTGTGTGCA ACAATATTGT TGTCCTCCGA ACGTGGTACA AGGATTGTTA 361 CATCCTCCGG GTACCCTAAG TGAACCAGGA CATTCACCAT TTATATTAGC CGTACAATGA 421 ATTGCATGGC ATTTCCCTCC ACTAGGATTG GTCGGGGCGA AAGTCATTGG AATATTAAAT 481 CCATCGACTA AAGAAATGTC CCAGAAATCT AGGTTGCTAA ACTGGTCCAA GGCGTACTCG 541 GCCAGGGTGT TTGGTGGTTT GCCCCACCCG GTACATTGCA AGACCCCACC ACAATCACCA 601 GTCTGACATG AACCTCTACC AGCACCATCA AAGTTGCAAT TCGTACGACC CCATATACGT 661 GCCATCTTAG TGCCCCTCGG TGCATTGATG ACCCATGTTT GGCCTCGATC AAGACGTCGA 721 CCACCGCCTA TTGNGGTCGA CGCCGCCCAG ACGGTGTATG GACAGTTGTT GCGTACCTCG 781 AAAGTGGCAG CATAAGTGTA AGT Predicted gene structure (within gDNA segment 37202 to 45604): Exon 1 40919 41575 ( 657 n); cDNA 151 803 ( 653 n); score: 0.900 PPA cDNA 12 1 MATCH C08HBa0235H18.1+ SGN-E540205+ 0.900 657 0.818 C PGS_C08HBa0235H18.1+_SGN-E540205+ (40919 41575) Alignment (genomic DNA sequence = upper lines): AAATATGCTT TATTGTGGCA TCAATTATGG GCAAAAAACA ACCCTATAAT TTGTACTACC 40978 |||| || || || || | |||| || ||||||||| |||||||||| |||||||||| AAATTTGGGC TA--GTAACA -CCATTA-GG ACAAAAAACA ACCCTATAAT TTGTACTACC 206 ACTAGGGCAA GTGAATAAGC TAGTAGGATC ATCTTGAGGG TAGCTATACG CATTAGGGCA 41038 |||||||||| || ||| || |||||||||| |||||| ||| |||||||||| ||| ||| || ACTAGGGCAA GTAAATGTGC TAGTAGGATC ATCTTGTGGG TAGCTATACG CATCAGGACA 266 CCTTTGTTTG AAAAATCTCG AAAATTTTGT AGGACCACAT GGGCCTTGAG TACAACAATA 41098 ||||||||| |||||||||| | || | || ||| |||||| || ||||| | | |||||||| TCTTTGTTTG AAAAATCTCG ACAAATCAGT AGGGCCACAT GGACCTTGTG TGCAACAATA 326 TTGTTGTCCT CCGAACGTGG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGGACT 41158 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||| || TTGTTGTCCT CCGAACGTGG TACAAGGATT GTTACATCCT CCGGGTACCC TAAGTGAACC 386 AGGGCATTCA CCGTTTATAT TAGCCGTGCA ATGAATTGCA TGGCATTTTC CTCCACTAGG 41218 ||| |||||| || ||||||| ||||||| || |||||||||| |||||||| | |||||||||| AGGACATTCA CCATTTATAT TAGCCGTACA ATGAATTGCA TGGCATTTCC CTCCACTAGG 446 ATTGGTTGGG GCGAAAGTCA TCGGTATATT AAATCCGTCA ACCAAAGAAA TGTCCCAGAA 41278 |||||| ||| |||||||||| | || ||||| |||||| || || ||||||| |||||||||| ATTGGTCGGG GCGAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAGAA 506 ATCTAGGTTG CTGAATTGGT CCAAAGCATA TTCAGCTAGG GTGTTTGGGG GTTTGCCCCA 41338 |||||||||| || || |||| |||| || || || || ||| |||||||| | |||||||||| ATCTAGGTTG CTAAACTGGT CCAAGGCGTA CTCGGCCAGG GTGTTTGGTG GTTTGCCCCA 566 CCCGGTACAG TGTAGGACCC CACCACAATC ACCAGTTTGG CATGAACCTC TACCAGCACC 41398 ||||||||| || | ||||| |||||||||| |||||| || |||||||||| |||||||||| CCCGGTACAT TGCAAGACCC CACCACAATC ACCAGTCTGA CATGAACCTC TACCAGCACC 626 ATTAAAATTG CAATTAGTAC GACCCCATAT ACGTGCCATC TTAGTGCCCC TCGGCGCATT 41458 || ||| ||| ||||| |||| |||||||||| |||||||||| |||||||||| |||| ||||| ATCAAAGTTG CAATTCGTAC GACCCCATAT ACGTGCCATC TTAGTGCCCC TCGGTGCATT 686 GATGACCCAT GTTTGGCCTC GATCGAGACG TCGACCACCG CCTATCGGGG TCGATGCTGC 41518 |||||||||| |||||||||| |||| ||||| |||||||||| ||||| | || |||| || || GATGACCCAT GTTTGGCCTC GATCAAGACG TCGACCACCG CCTATTGNGG TCGACGCCGC 746 CCAAACGGTG TAGGGACAAT TGTTGCGTAC CTCGATAGTG GCAGCATAAG TGTAAGT 41575 ||| |||||| || ||||| | |||||||||| ||||| |||| |||||||||| ||||||| CCAGACGGTG TATGGACAGT TGTTGCGTAC CTCGAAAGTG GCAGCATAAG TGTAAGT 803 hqPGS_C08HBa0235H18.1+_SGN-E540205+ (40919 41575) ******************************************************************************** EST sequence 1044 -strand 741 n (File: SGN-E355282-) 1 TTTTTTTNNT CGAAAACAAC ATATTTGTGA TGATGTGACT TTTATTCATG TAATTATATT 61 AGGTTTATTA CAAGCCAATT ATATAACTCG ACTACTTCAA GCAATTTAAA AGAAAGTGAC 121 TCAATTTTAC TTAGCCTCTT CATCACTTGA GGGCATCTCC AAGGGGAAAT TTGGGCTAGT 181 AACACCATTA GGACAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTAAATGT 241 GCTAGTAGGA TCATCTTGTG GGTAGCTATA CGCATCAGGA CATCTTTGTT TGAAAAATCT 301 CGACAAATCA GTAGGGCCAC ATGGACCTTG TGTGCAACAA TATTGTTGTC CTCCGAACGT 361 GGTACAAGGA TTGTTACATC CTCCGGGTAC CCTAAGTGAA CCAGGACATT CACCATTTAT 421 ATTAGCCGTA CAATGAATTG CATGGCATTT CCCTCCACTA GGATTGGTCG GGGCGAAAGT 481 CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAG AAATCTAGGT TGCTAAACTG 541 GTCCAAGGCG TACTCGGCCA GGGTGTTTGG TGGTTTGCCC CACCCGGTAC ATTGCAAGAC 601 CCCACCACAA TCACCAGTCT GACATGAACC TCTACCAGCA CCATCAAAGT TGCAATTCGT 661 ACGACCCCAT ATACGTGCCA TCTTAGTGCC CCTCGGTGCA TTGATGACCC ATGTTTGGCC 721 TCGATCAAGA CGTCGACCAC C Predicted gene structure (within gDNA segment 38410 to 42232): Exon 1 40919 41497 ( 579 n); cDNA 167 741 ( 575 n); score: 0.900 MATCH C08HBa0235H18.1+ SGN-E355282- 0.900 579 0.781 C PGS_C08HBa0235H18.1+_SGN-E355282- (40919 41497) Alignment (genomic DNA sequence = upper lines): AAATATGCTT TATTGTGGCA TCAATTATGG GCAAAAAACA ACCCTATAAT TTGTACTACC 40978 |||| || || || || | |||| || ||||||||| |||||||||| |||||||||| AAATTTGGGC TA--GTAACA -CCATTA-GG ACAAAAAACA ACCCTATAAT TTGTACTACC 222 ACTAGGGCAA GTGAATAAGC TAGTAGGATC ATCTTGAGGG TAGCTATACG CATTAGGGCA 41038 |||||||||| || ||| || |||||||||| |||||| ||| |||||||||| ||| ||| || ACTAGGGCAA GTAAATGTGC TAGTAGGATC ATCTTGTGGG TAGCTATACG CATCAGGACA 282 CCTTTGTTTG AAAAATCTCG AAAATTTTGT AGGACCACAT GGGCCTTGAG TACAACAATA 41098 ||||||||| |||||||||| | || | || ||| |||||| || ||||| | | |||||||| TCTTTGTTTG AAAAATCTCG ACAAATCAGT AGGGCCACAT GGACCTTGTG TGCAACAATA 342 TTGTTGTCCT CCGAACGTGG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGGACT 41158 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||| || TTGTTGTCCT CCGAACGTGG TACAAGGATT GTTACATCCT CCGGGTACCC TAAGTGAACC 402 AGGGCATTCA CCGTTTATAT TAGCCGTGCA ATGAATTGCA TGGCATTTTC CTCCACTAGG 41218 ||| |||||| || ||||||| ||||||| || |||||||||| |||||||| | |||||||||| AGGACATTCA CCATTTATAT TAGCCGTACA ATGAATTGCA TGGCATTTCC CTCCACTAGG 462 ATTGGTTGGG GCGAAAGTCA TCGGTATATT AAATCCGTCA ACCAAAGAAA TGTCCCAGAA 41278 |||||| ||| |||||||||| | || ||||| |||||| || || ||||||| |||||||||| ATTGGTCGGG GCGAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAGAA 522 ATCTAGGTTG CTGAATTGGT CCAAAGCATA TTCAGCTAGG GTGTTTGGGG GTTTGCCCCA 41338 |||||||||| || || |||| |||| || || || || ||| |||||||| | |||||||||| ATCTAGGTTG CTAAACTGGT CCAAGGCGTA CTCGGCCAGG GTGTTTGGTG GTTTGCCCCA 582 CCCGGTACAG TGTAGGACCC CACCACAATC ACCAGTTTGG CATGAACCTC TACCAGCACC 41398 ||||||||| || | ||||| |||||||||| |||||| || |||||||||| |||||||||| CCCGGTACAT TGCAAGACCC CACCACAATC ACCAGTCTGA CATGAACCTC TACCAGCACC 642 ATTAAAATTG CAATTAGTAC GACCCCATAT ACGTGCCATC TTAGTGCCCC TCGGCGCATT 41458 || ||| ||| ||||| |||| |||||||||| |||||||||| |||||||||| |||| ||||| ATCAAAGTTG CAATTCGTAC GACCCCATAT ACGTGCCATC TTAGTGCCCC TCGGTGCATT 702 GATGACCCAT GTTTGGCCTC GATCGAGACG TCGACCACC 41497 |||||||||| |||||||||| |||| ||||| ||||||||| GATGACCCAT GTTTGGCCTC GATCAAGACG TCGACCACC 741 hqPGS_C08HBa0235H18.1+_SGN-E355282- (40919 41497) ******************************************************************************** EST sequence 833 -strand 672 n (File: SGN-E352685-) 1 ACTTTTATTC ATGTAATTAT ATTAGGTTTA TTACAAGCCA ATTATATAAC TCGACTACTT 61 CAAGCAATTT AAAAGAAAGT GACTCAATTT TACTTAGCCT CTTCATCACT TGAGGGCATC 121 TCCAAGGGGA AATTTGGGCT AGTAACACCA TTAGGACAAA AAACAACCCT ATAATTTGTA 181 CTACCACTAG GGCAAGTAAA TGTGCTAGTA GGATCATCTT GTGGGTAGCT ATACGCATCA 241 GGACATCTTT GTTTGAAAAA TCTCGACAAA TCAGTAGGGC CACATGGACC TTGTGTGCAA 301 CAATATTGTT GTCCTCCGAA CGTGGTACAA GGATTGTTAC ATCCTCCGGG TACCCTAAGT 361 GAACCAGGAC ATTCACCATT TATATTAGCC GTACAATGAA TTGCATGGCA TTTCCCTCCA 421 CTAGGATTGG TCGGGGCGAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC 481 CAGAAATCTA GGTTGCTAAA CTGGTCCAAG GCGTACTCGG CCAGGGTGTT TGGTGGTTTG 541 CCCCACCCGG TACATTGCAA GACCCCACCA CAATCACCAG TCTGACATGA ACCTCTACCA 601 GCACCATCAA AGTTGCAATT CGTACGACCC CATATACGTG CCATCTTAGT GCCCCTCGGT 661 GCATTGATGA CC Predicted gene structure (within gDNA segment 38780 to 42182): Exon 1 40919 41465 ( 547 n); cDNA 130 672 ( 543 n); score: 0.896 MATCH C08HBa0235H18.1+ SGN-E352685- 0.896 547 0.814 C PGS_C08HBa0235H18.1+_SGN-E352685- (40919 41465) Alignment (genomic DNA sequence = upper lines): AAATATGCTT TATTGTGGCA TCAATTATGG GCAAAAAACA ACCCTATAAT TTGTACTACC 40978 |||| || || || || | |||| || ||||||||| |||||||||| |||||||||| AAATTTGGGC TA--GTAACA -CCATTA-GG ACAAAAAACA ACCCTATAAT TTGTACTACC 185 ACTAGGGCAA GTGAATAAGC TAGTAGGATC ATCTTGAGGG TAGCTATACG CATTAGGGCA 41038 |||||||||| || ||| || |||||||||| |||||| ||| |||||||||| ||| ||| || ACTAGGGCAA GTAAATGTGC TAGTAGGATC ATCTTGTGGG TAGCTATACG CATCAGGACA 245 CCTTTGTTTG AAAAATCTCG AAAATTTTGT AGGACCACAT GGGCCTTGAG TACAACAATA 41098 ||||||||| |||||||||| | || | || ||| |||||| || ||||| | | |||||||| TCTTTGTTTG AAAAATCTCG ACAAATCAGT AGGGCCACAT GGACCTTGTG TGCAACAATA 305 TTGTTGTCCT CCGAACGTGG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGGACT 41158 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||| || TTGTTGTCCT CCGAACGTGG TACAAGGATT GTTACATCCT CCGGGTACCC TAAGTGAACC 365 AGGGCATTCA CCGTTTATAT TAGCCGTGCA ATGAATTGCA TGGCATTTTC CTCCACTAGG 41218 ||| |||||| || ||||||| ||||||| || |||||||||| |||||||| | |||||||||| AGGACATTCA CCATTTATAT TAGCCGTACA ATGAATTGCA TGGCATTTCC CTCCACTAGG 425 ATTGGTTGGG GCGAAAGTCA TCGGTATATT AAATCCGTCA ACCAAAGAAA TGTCCCAGAA 41278 |||||| ||| |||||||||| | || ||||| |||||| || || ||||||| |||||||||| ATTGGTCGGG GCGAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAGAA 485 ATCTAGGTTG CTGAATTGGT CCAAAGCATA TTCAGCTAGG GTGTTTGGGG GTTTGCCCCA 41338 |||||||||| || || |||| |||| || || || || ||| |||||||| | |||||||||| ATCTAGGTTG CTAAACTGGT CCAAGGCGTA CTCGGCCAGG GTGTTTGGTG GTTTGCCCCA 545 CCCGGTACAG TGTAGGACCC CACCACAATC ACCAGTTTGG CATGAACCTC TACCAGCACC 41398 ||||||||| || | ||||| |||||||||| |||||| || |||||||||| |||||||||| CCCGGTACAT TGCAAGACCC CACCACAATC ACCAGTCTGA CATGAACCTC TACCAGCACC 605 ATTAAAATTG CAATTAGTAC GACCCCATAT ACGTGCCATC TTAGTGCCCC TCGGCGCATT 41458 || ||| ||| ||||| |||| |||||||||| |||||||||| |||||||||| |||| ||||| ATCAAAGTTG CAATTCGTAC GACCCCATAT ACGTGCCATC TTAGTGCCCC TCGGTGCATT 665 GATGACC 41465 ||||||| GATGACC 672 hqPGS_C08HBa0235H18.1+_SGN-E352685- (40919 41465) ******************************************************************************** EST sequence 109 +strand 667 n (File: SGN-E302617+) 1 TTTTTTTTTT TGTGATGATG TGACTTTTAT TCATGTAATT ATATTAGGTT TATTACAAGC 61 CAATTATATA ACTCGACTAC TTCAAGCAAT TTAAAAGAAA GTGACTCAAT TTTACTTAGC 121 CTCTTCATCA CTTGAGGGCA TCTCCAAGGG GAAATTTGGG CTAGTAACAC CATTAGGACA 181 AAAAACAACC CTATAATTTG TACTACCACT AGGGCAAGTA AATGTGCTAG TAGGATCATC 241 TTGTGGGTAG CTATACGCAT CAGGACATCT TTGTTTGAAA AATCTCGACA AATCAGTAGG 301 GCCACATGGA CCTTGTGTGC AACAATATTG TTGTCCTCCG AACGTGGTAC AAGGATTGTT 361 ACATCCTCCG GGTACCCTAA GTGAACCAGG ACATTCACCA TTTATATTAG CCGTACAATG 421 AATTGCATGG CATTTCCCTC CACTAGGATT GGTCGGGGCG AAAGTCATTG GAATATTAAA 481 TCCATCGACT AAAGAAATGT CCCAGAAATC TAGGTTGCTA AACTGGTCCA AGGCGTACTC 541 GGCCAGGGTG TTTGGTGGTT TGCCCCACCC GGTACATTGC AAGACCCCAC CACAATCACC 601 AGTCTGACAT GAACCTCTAC CAGCACCATC AAAGTTGCAA TTCGTACGAC CCCATATACG 661 TGCCATC Predicted gene structure (within gDNA segment 37192 to 44342): Exon 1 40919 41438 ( 520 n); cDNA 152 667 ( 516 n); score: 0.892 PPA cDNA 13 1 MATCH C08HBa0235H18.1+ SGN-E302617+ 0.892 520 0.780 C PGS_C08HBa0235H18.1+_SGN-E302617+ (40919 41438) Alignment (genomic DNA sequence = upper lines): AAATATGCTT TATTGTGGCA TCAATTATGG GCAAAAAACA ACCCTATAAT TTGTACTACC 40978 |||| || || || || | |||| || ||||||||| |||||||||| |||||||||| AAATTTGGGC TA--GTAACA -CCATTA-GG ACAAAAAACA ACCCTATAAT TTGTACTACC 207 ACTAGGGCAA GTGAATAAGC TAGTAGGATC ATCTTGAGGG TAGCTATACG CATTAGGGCA 41038 |||||||||| || ||| || |||||||||| |||||| ||| |||||||||| ||| ||| || ACTAGGGCAA GTAAATGTGC TAGTAGGATC ATCTTGTGGG TAGCTATACG CATCAGGACA 267 CCTTTGTTTG AAAAATCTCG AAAATTTTGT AGGACCACAT GGGCCTTGAG TACAACAATA 41098 ||||||||| |||||||||| | || | || ||| |||||| || ||||| | | |||||||| TCTTTGTTTG AAAAATCTCG ACAAATCAGT AGGGCCACAT GGACCTTGTG TGCAACAATA 327 TTGTTGTCCT CCGAACGTGG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGGACT 41158 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||| || TTGTTGTCCT CCGAACGTGG TACAAGGATT GTTACATCCT CCGGGTACCC TAAGTGAACC 387 AGGGCATTCA CCGTTTATAT TAGCCGTGCA ATGAATTGCA TGGCATTTTC CTCCACTAGG 41218 ||| |||||| || ||||||| ||||||| || |||||||||| |||||||| | |||||||||| AGGACATTCA CCATTTATAT TAGCCGTACA ATGAATTGCA TGGCATTTCC CTCCACTAGG 447 ATTGGTTGGG GCGAAAGTCA TCGGTATATT AAATCCGTCA ACCAAAGAAA TGTCCCAGAA 41278 |||||| ||| |||||||||| | || ||||| |||||| || || ||||||| |||||||||| ATTGGTCGGG GCGAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAGAA 507 ATCTAGGTTG CTGAATTGGT CCAAAGCATA TTCAGCTAGG GTGTTTGGGG GTTTGCCCCA 41338 |||||||||| || || |||| |||| || || || || ||| |||||||| | |||||||||| ATCTAGGTTG CTAAACTGGT CCAAGGCGTA CTCGGCCAGG GTGTTTGGTG GTTTGCCCCA 567 CCCGGTACAG TGTAGGACCC CACCACAATC ACCAGTTTGG CATGAACCTC TACCAGCACC 41398 ||||||||| || | ||||| |||||||||| |||||| || |||||||||| |||||||||| CCCGGTACAT TGCAAGACCC CACCACAATC ACCAGTCTGA CATGAACCTC TACCAGCACC 627 ATTAAAATTG CAATTAGTAC GACCCCATAT ACGTGCCATC 41438 || ||| ||| ||||| |||| |||||||||| |||||||||| ATCAAAGTTG CAATTCGTAC GACCCCATAT ACGTGCCATC 667 hqPGS_C08HBa0235H18.1+_SGN-E302617+ (40919 41438) ******************************************************************************** EST sequence 556 -strand 580 n (File: SGN-E295156-) 1 TTTTTTTTTT TGTGATGATG TGACTTTTAT TCATGTAATT ATATTAGGTT TATNCCAAGC 61 CAATTATATA ACTCGACTAC TTCAAGCAAT TTAAAAGAAA GTGACTCAAT TTTACTTAGC 121 CTCTTCATCA CTTGAGGGCA TCTCCAAGGG GAAATTTGGG CTAGTAACAC CATTAGGACA 181 AAAAACAACC CTATAATTTG TACTACCACT AGGGCAAGTA AATGTGCTAG TAGGATCATC 241 TTGTGGGTAG CTATACGCAT CAGGACATCT TTGTTTGAAA AATCTCGACA AATCAGTAGG 301 GCCACATGGA CCTTGTGTGC AACAATATTG TTGTCCTCCG AACGTGGTAC AAGGATTGTT 361 ACATCCTCCG GGTACCCTAA GTGAACCAGG ACATTCACCA TTTATATTAG CCGTACAATG 421 AATTGCATGG CATTTCCCTC CACTAGGATT GGTCGGGGCG AAAGTCATTG GAATATTAAA 481 TCCATCGACT AAAGAAATGT CCCAGAAATC TAGGTTGCTA AACTGGTCCA AGGCGTACTC 541 GGCCAGGGTG TTTGGTGGTT TGCCCCACCC GGTACATTGC Predicted gene structure (within gDNA segment 38560 to 44812): Exon 1 40919 41350 ( 432 n); cDNA 152 579 ( 428 n); score: 0.887 PPA cDNA 13 1 MATCH C08HBa0235H18.1+ SGN-E295156- 0.887 432 0.745 C PGS_C08HBa0235H18.1+_SGN-E295156- (40919 41350) Alignment (genomic DNA sequence = upper lines): AAATATGCTT TATTGTGGCA TCAATTATGG GCAAAAAACA ACCCTATAAT TTGTACTACC 40978 |||| || || || || | |||| || ||||||||| |||||||||| |||||||||| AAATTTGGGC TA--GTAACA -CCATTA-GG ACAAAAAACA ACCCTATAAT TTGTACTACC 207 ACTAGGGCAA GTGAATAAGC TAGTAGGATC ATCTTGAGGG TAGCTATACG CATTAGGGCA 41038 |||||||||| || ||| || |||||||||| |||||| ||| |||||||||| ||| ||| || ACTAGGGCAA GTAAATGTGC TAGTAGGATC ATCTTGTGGG TAGCTATACG CATCAGGACA 267 CCTTTGTTTG AAAAATCTCG AAAATTTTGT AGGACCACAT GGGCCTTGAG TACAACAATA 41098 ||||||||| |||||||||| | || | || ||| |||||| || ||||| | | |||||||| TCTTTGTTTG AAAAATCTCG ACAAATCAGT AGGGCCACAT GGACCTTGTG TGCAACAATA 327 TTGTTGTCCT CCGAACGTGG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGGACT 41158 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||| || TTGTTGTCCT CCGAACGTGG TACAAGGATT GTTACATCCT CCGGGTACCC TAAGTGAACC 387 AGGGCATTCA CCGTTTATAT TAGCCGTGCA ATGAATTGCA TGGCATTTTC CTCCACTAGG 41218 ||| |||||| || ||||||| ||||||| || |||||||||| |||||||| | |||||||||| AGGACATTCA CCATTTATAT TAGCCGTACA ATGAATTGCA TGGCATTTCC CTCCACTAGG 447 ATTGGTTGGG GCGAAAGTCA TCGGTATATT AAATCCGTCA ACCAAAGAAA TGTCCCAGAA 41278 |||||| ||| |||||||||| | || ||||| |||||| || || ||||||| |||||||||| ATTGGTCGGG GCGAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAGAA 507 ATCTAGGTTG CTGAATTGGT CCAAAGCATA TTCAGCTAGG GTGTTTGGGG GTTTGCCCCA 41338 |||||||||| || || |||| |||| || || || || ||| |||||||| | |||||||||| ATCTAGGTTG CTAAACTGGT CCAAGGCGTA CTCGGCCAGG GTGTTTGGTG GTTTGCCCCA 567 CCCGGTACAG TG 41350 ||||||||| || CCCGGTACAT TG 579 hqPGS_C08HBa0235H18.1+_SGN-E295156- (40919 41350) ******************************************************************************** EST sequence 1216 -strand 583 n (File: SGN-E349926-) 1 TTTTTTTTTC GTGATGACGT GACTTTTATT CATGTAATTA TATTAGGTTT ATTACAAGCC 61 AATTATATAA CTCGTGTACT TCAAGCATTT TAAAAGAAAG TGACTCAATT TTACTTAGCC 121 TCTTCATCAC TAGAGGGCAT CTCCAAGGGG AAATTTGGGC TAGTAACTCC ATTAGGACAA 181 AAAACAACCC TATAATTTGT ACTACCACTA GGGCAAGTAA ATGTGATAGT AGGATCATCT 241 TGTGGGTAGC TATACGCATC AGGACATCTT TGTTTGAAAA ATCTAGACAA ATCAGTAGGG 301 CCACATGGAC CTTGTGTGCA ACAATATTGT TGTCATCTGA ACGTGGTACA AGGATTGTTA 361 CATCCTCCGG GTACCATAAG TGAACCAGGA CATTCACCAT TTATATTAGC CGTACAATGA 421 ATTGCATGGC ATTTCCCTCC ACTAGGATTG GTCGGGGAGA AAGTCATTGG AATATTAAAT 481 CCATCGATTA AAGAAATGTC CCAGAAATAT AGGTTGGTAA ACTGGTCCAA GGCGTACTCG 541 GCCAGGGTGT TTGGTGGTTT GCCCCACCCG GTACATAGCA AGC Predicted gene structure (within gDNA segment 38570 to 44924): Exon 1 40919 41347 ( 429 n); cDNA 151 575 ( 425 n); score: 0.867 MATCH C08HBa0235H18.1+ SGN-E349926- 0.867 429 0.736 C PGS_C08HBa0235H18.1+_SGN-E349926- (40919 41347) Alignment (genomic DNA sequence = upper lines): AAATATGCTT TATTGTGGCA TCAATTATGG GCAAAAAACA ACCCTATAAT TTGTACTACC 40978 |||| || || || | || |||| || ||||||||| |||||||||| |||||||||| AAATTTGGGC TA--GTAAC- TCCATTA-GG ACAAAAAACA ACCCTATAAT TTGTACTACC 206 ACTAGGGCAA GTGAATAAGC TAGTAGGATC ATCTTGAGGG TAGCTATACG CATTAGGGCA 41038 |||||||||| || ||| | |||||||||| |||||| ||| |||||||||| ||| ||| || ACTAGGGCAA GTAAATGTGA TAGTAGGATC ATCTTGTGGG TAGCTATACG CATCAGGACA 266 CCTTTGTTTG AAAAATCTCG AAAATTTTGT AGGACCACAT GGGCCTTGAG TACAACAATA 41098 ||||||||| |||||||| | | || | || ||| |||||| || ||||| | | |||||||| TCTTTGTTTG AAAAATCTAG ACAAATCAGT AGGGCCACAT GGACCTTGTG TGCAACAATA 326 TTGTTGTCCT CCGAACGTGG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGGACT 41158 |||||||| | | |||||||| ||||||| || |||||||||| ||||||||| |||||| || TTGTTGTCAT CTGAACGTGG TACAAGGATT GTTACATCCT CCGGGTACCA TAAGTGAACC 386 AGGGCATTCA CCGTTTATAT TAGCCGTGCA ATGAATTGCA TGGCATTTTC CTCCACTAGG 41218 ||| |||||| || ||||||| ||||||| || |||||||||| |||||||| | |||||||||| AGGACATTCA CCATTTATAT TAGCCGTACA ATGAATTGCA TGGCATTTCC CTCCACTAGG 446 ATTGGTTGGG GCGAAAGTCA TCGGTATATT AAATCCGTCA ACCAAAGAAA TGTCCCAGAA 41278 |||||| ||| | |||||||| | || ||||| |||||| || | ||||||| |||||||||| ATTGGTCGGG GAGAAAGTCA TTGGAATATT AAATCCATCG ATTAAAGAAA TGTCCCAGAA 506 ATCTAGGTTG CTGAATTGGT CCAAAGCATA TTCAGCTAGG GTGTTTGGGG GTTTGCCCCA 41338 || ||||||| | || |||| |||| || || || || ||| |||||||| | |||||||||| ATATAGGTTG GTAAACTGGT CCAAGGCGTA CTCGGCCAGG GTGTTTGGTG GTTTGCCCCA 566 CCCGGTACA 41347 ||||||||| CCCGGTACA 575 hqPGS_C08HBa0235H18.1+_SGN-E349926- (40919 41347) ******************************************************************************** EST sequence 982 -strand 547 n (File: SGN-E354307-) 1 ATGTGACTTT TATTCATGTA ATTATATTAG GTTTATTACA AGCCAATTAT ATAACTCGAC 61 TACTTCAAGC AATTTAAAAG AAAGTGACTC AATTTTACTT AGCCTCTTCA TCACTTGAGG 121 GCATCTCCAA GGGGAAATTT GGGCTAGTAA CACCATTAGG ACAAAAAACA ACCCTATAAT 181 TTGTACTACC ACTAGGGCAA GTAAATGTGC TAGTAGGATC ATCTTGTGGG TAGCTATACG 241 CATCAGGACA TCTTTGTTTG AAAAATCTCG ACAAATCAGT AGGGCCACAT GGACCTTGTG 301 TGCAACAATA TTGTTGTCCT CCGAACGTGG TACAAGGATT GTTACATCCT CCGGGTACCC 361 TAAGTGAACC AGGACATTCA CCATTTATAT TAGCCGTACA ATGAATTGCA TGGCATTTCC 421 CTCCACTAGG ATTGGTCGGG GCGAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA 481 TGTCCCAGAA ATCTAGGTTG CTAAACTGGT CCAAGGCGTA CTCGGCCAGG GTGTTTGGTG 541 GTTTGCC Predicted gene structure (within gDNA segment 38730 to 44652): Exon 1 40919 41335 ( 417 n); cDNA 135 547 ( 413 n); score: 0.885 MATCH C08HBa0235H18.1+ SGN-E354307- 0.885 417 0.762 C PGS_C08HBa0235H18.1+_SGN-E354307- (40919 41335) Alignment (genomic DNA sequence = upper lines): AAATATGCTT TATTGTGGCA TCAATTATGG GCAAAAAACA ACCCTATAAT TTGTACTACC 40978 |||| || || || || | |||| || ||||||||| |||||||||| |||||||||| AAATTTGGGC TA--GTAACA -CCATTA-GG ACAAAAAACA ACCCTATAAT TTGTACTACC 190 ACTAGGGCAA GTGAATAAGC TAGTAGGATC ATCTTGAGGG TAGCTATACG CATTAGGGCA 41038 |||||||||| || ||| || |||||||||| |||||| ||| |||||||||| ||| ||| || ACTAGGGCAA GTAAATGTGC TAGTAGGATC ATCTTGTGGG TAGCTATACG CATCAGGACA 250 CCTTTGTTTG AAAAATCTCG AAAATTTTGT AGGACCACAT GGGCCTTGAG TACAACAATA 41098 ||||||||| |||||||||| | || | || ||| |||||| || ||||| | | |||||||| TCTTTGTTTG AAAAATCTCG ACAAATCAGT AGGGCCACAT GGACCTTGTG TGCAACAATA 310 TTGTTGTCCT CCGAACGTGG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGGACT 41158 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||| || TTGTTGTCCT CCGAACGTGG TACAAGGATT GTTACATCCT CCGGGTACCC TAAGTGAACC 370 AGGGCATTCA CCGTTTATAT TAGCCGTGCA ATGAATTGCA TGGCATTTTC CTCCACTAGG 41218 ||| |||||| || ||||||| ||||||| || |||||||||| |||||||| | |||||||||| AGGACATTCA CCATTTATAT TAGCCGTACA ATGAATTGCA TGGCATTTCC CTCCACTAGG 430 ATTGGTTGGG GCGAAAGTCA TCGGTATATT AAATCCGTCA ACCAAAGAAA TGTCCCAGAA 41278 |||||| ||| |||||||||| | || ||||| |||||| || || ||||||| |||||||||| ATTGGTCGGG GCGAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAGAA 490 ATCTAGGTTG CTGAATTGGT CCAAAGCATA TTCAGCTAGG GTGTTTGGGG GTTTGCC 41335 |||||||||| || || |||| |||| || || || || ||| |||||||| | ||||||| ATCTAGGTTG CTAAACTGGT CCAAGGCGTA CTCGGCCAGG GTGTTTGGTG GTTTGCC 547 hqPGS_C08HBa0235H18.1+_SGN-E354307- (40919 41335) ******************************************************************************** EST sequence 1136 -strand 563 n (File: SGN-E357558-) 1 TTTTTTTTTT GTGATGATGT GACTTTTATT CATGTAATTA TATTAGGTTT ATTACAAGCC 61 AATTATATAA CTCGACTACT TCAAGCAATT TAAAAGAAAG TGACTCAATT TTACTTAGCC 121 TCTTCATCAC TTGAGGGCAT CTCCAAGGGG AAATTTGGGC TAGTAACACC ATTAGGACAA 181 AAAACAACCC TATAATTTGT ACTACCACTA GGGCAAGTAA ATGTGCTAGT AGGATCATCT 241 TGTGGGTAGC TATACGCATC AGGACATCTT TGTTTGAAAA ATCTCGACAA ATCAGTAGGG 301 CCACATGGAC CTTGTGTGCA ACAATATTGT TGTCCTCCGA ACGTGGTACA AGGATTGTTA 361 CATCCTCCGG GTACCCTAAG TGAACCAGGA CATTCACCAT TTATATTAGC CGTACAATGA 421 ATTGCATGGC ATTTCCCTCC ACTAGGATTG GTCGGGGCGA AAGTCATTGG AATATTAAAT 481 CCATCGACTA AAGAAATGTC CCAGAAATCT AGGTTGCTAA ACTGGTCCAA GGCGTACTCG 541 GCCAGGGTGT TTGGTGGTTT GCC Predicted gene structure (within gDNA segment 38570 to 44652): Exon 1 40919 41335 ( 417 n); cDNA 151 563 ( 413 n); score: 0.885 PPA cDNA 12 1 MATCH C08HBa0235H18.1+ SGN-E357558- 0.885 417 0.741 C PGS_C08HBa0235H18.1+_SGN-E357558- (40919 41335) Alignment (genomic DNA sequence = upper lines): AAATATGCTT TATTGTGGCA TCAATTATGG GCAAAAAACA ACCCTATAAT TTGTACTACC 40978 |||| || || || || | |||| || ||||||||| |||||||||| |||||||||| AAATTTGGGC TA--GTAACA -CCATTA-GG ACAAAAAACA ACCCTATAAT TTGTACTACC 206 ACTAGGGCAA GTGAATAAGC TAGTAGGATC ATCTTGAGGG TAGCTATACG CATTAGGGCA 41038 |||||||||| || ||| || |||||||||| |||||| ||| |||||||||| ||| ||| || ACTAGGGCAA GTAAATGTGC TAGTAGGATC ATCTTGTGGG TAGCTATACG CATCAGGACA 266 CCTTTGTTTG AAAAATCTCG AAAATTTTGT AGGACCACAT GGGCCTTGAG TACAACAATA 41098 ||||||||| |||||||||| | || | || ||| |||||| || ||||| | | |||||||| TCTTTGTTTG AAAAATCTCG ACAAATCAGT AGGGCCACAT GGACCTTGTG TGCAACAATA 326 TTGTTGTCCT CCGAACGTGG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGGACT 41158 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||| || TTGTTGTCCT CCGAACGTGG TACAAGGATT GTTACATCCT CCGGGTACCC TAAGTGAACC 386 AGGGCATTCA CCGTTTATAT TAGCCGTGCA ATGAATTGCA TGGCATTTTC CTCCACTAGG 41218 ||| |||||| || ||||||| ||||||| || |||||||||| |||||||| | |||||||||| AGGACATTCA CCATTTATAT TAGCCGTACA ATGAATTGCA TGGCATTTCC CTCCACTAGG 446 ATTGGTTGGG GCGAAAGTCA TCGGTATATT AAATCCGTCA ACCAAAGAAA TGTCCCAGAA 41278 |||||| ||| |||||||||| | || ||||| |||||| || || ||||||| |||||||||| ATTGGTCGGG GCGAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAGAA 506 ATCTAGGTTG CTGAATTGGT CCAAAGCATA TTCAGCTAGG GTGTTTGGGG GTTTGCC 41335 |||||||||| || || |||| |||| || || || || ||| |||||||| | ||||||| ATCTAGGTTG CTAAACTGGT CCAAGGCGTA CTCGGCCAGG GTGTTTGGTG GTTTGCC 563 hqPGS_C08HBa0235H18.1+_SGN-E357558- (40919 41335) ******************************************************************************** EST sequence 1180 -strand 563 n (File: SGN-E357673-) 1 TTTTTTTTTT GTGATGATGT GACTTTTATT CATGTAATTA TATTAGGTTT ATTACAAGCC 61 AATTATATAA CTCGACTACT TCAAGCAATT TAAAAGAAAG TGACTCAATT TTACTTAGCC 121 TCTTCATCAC TTGAGGGCAT CTCCAAGGGG AAATTTGGGC TAGTAACACC ATTAGGACAA 181 AAAACAACCC TATAATTTGT ACTACCACTA GGGCAAGTAA ATGTGCTAGT AGGATCATCT 241 TGTGGGTAGC TATACGCATC AGGACATCTT TGTTTGAAAA ATCTCGACAA ATCAGTAGGG 301 CCACATGGAC CTTGTGTGCA ACAATATTGT TGTCCTCCGA ACGTGGTACA AGGATTGTTA 361 CATCCTCCGG GTACCCTAAG TGAACCAGGA CATTCACCAT TTATATTAGC CGTACAATGA 421 ATTGCATGGC ATTTCCCTCC ACTAGGATTG GTCGGGGCGA AAGTCATTGG AATATTAAAT 481 CCATCGACTA AAGAAATGTC CCAGAAATCT AGGTTGCTAA ACTGGTCCAA GGCGTACTCG 541 GCCAGGGTGT TTGGTGGTTT GCC Predicted gene structure (within gDNA segment 38570 to 44652): Exon 1 40919 41335 ( 417 n); cDNA 151 563 ( 413 n); score: 0.885 PPA cDNA 12 1 MATCH C08HBa0235H18.1+ SGN-E357673- 0.885 417 0.741 C PGS_C08HBa0235H18.1+_SGN-E357673- (40919 41335) Alignment (genomic DNA sequence = upper lines): AAATATGCTT TATTGTGGCA TCAATTATGG GCAAAAAACA ACCCTATAAT TTGTACTACC 40978 |||| || || || || | |||| || ||||||||| |||||||||| |||||||||| AAATTTGGGC TA--GTAACA -CCATTA-GG ACAAAAAACA ACCCTATAAT TTGTACTACC 206 ACTAGGGCAA GTGAATAAGC TAGTAGGATC ATCTTGAGGG TAGCTATACG CATTAGGGCA 41038 |||||||||| || ||| || |||||||||| |||||| ||| |||||||||| ||| ||| || ACTAGGGCAA GTAAATGTGC TAGTAGGATC ATCTTGTGGG TAGCTATACG CATCAGGACA 266 CCTTTGTTTG AAAAATCTCG AAAATTTTGT AGGACCACAT GGGCCTTGAG TACAACAATA 41098 ||||||||| |||||||||| | || | || ||| |||||| || ||||| | | |||||||| TCTTTGTTTG AAAAATCTCG ACAAATCAGT AGGGCCACAT GGACCTTGTG TGCAACAATA 326 TTGTTGTCCT CCGAACGTGG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGGACT 41158 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||| || TTGTTGTCCT CCGAACGTGG TACAAGGATT GTTACATCCT CCGGGTACCC TAAGTGAACC 386 AGGGCATTCA CCGTTTATAT TAGCCGTGCA ATGAATTGCA TGGCATTTTC CTCCACTAGG 41218 ||| |||||| || ||||||| ||||||| || |||||||||| |||||||| | |||||||||| AGGACATTCA CCATTTATAT TAGCCGTACA ATGAATTGCA TGGCATTTCC CTCCACTAGG 446 ATTGGTTGGG GCGAAAGTCA TCGGTATATT AAATCCGTCA ACCAAAGAAA TGTCCCAGAA 41278 |||||| ||| |||||||||| | || ||||| |||||| || || ||||||| |||||||||| ATTGGTCGGG GCGAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAGAA 506 ATCTAGGTTG CTGAATTGGT CCAAAGCATA TTCAGCTAGG GTGTTTGGGG GTTTGCC 41335 |||||||||| || || |||| |||| || || || || ||| |||||||| | ||||||| ATCTAGGTTG CTAAACTGGT CCAAGGCGTA CTCGGCCAGG GTGTTTGGTG GTTTGCC 563 hqPGS_C08HBa0235H18.1+_SGN-E357673- (40919 41335) ******************************************************************************** EST sequence 942 -strand 558 n (File: SGN-E353160-) 1 TTTTTTTGTG ATGATGTGAC TTTTATTCAT GTAATTATAT TAGGTTTATT ACAAGCCAAT 61 TATATAAACT CGACTACTTC AAGCAATTAA AAAGAAAGTG ACTCAATTTT ACTTAGCCTC 121 TTCATCACTT GAGGGCATCT CCAAGGGGAA ATTTGGGCTA GTAACACCAT TAGGACAAAA 181 AACAACCCTA TAATTTGTAC TACCACTAGG GCAAGTAAAT GTGCTAGTAG GATCATCTTG 241 TGGGTAGCTA TACGCATCAG GACATCTTTG TTTGAAAAAT CTCGACAAAT CAGTAGGGCC 301 ACATGGACCT TGTGTGCAAC AATATTGTTG TCCTCCGAAC GTGGTACAAG GATTGTTACA 361 TCCTCCGGGT ACCCTAAGTG AACCAGGACA TTCACCATTT ATATTAGCCG TACAATGAAT 421 TGCATGGCAT TTCCCTCCAC TAGGATTGGT CGGGGCGAAA GTCATTGGAA TATTAAATCC 481 ATCGACTAAA GAAATGTCCC AGAAATCTAG GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 541 CAGGGTGTTT GGTGGTTT Predicted gene structure (within gDNA segment 38590 to 44622): Exon 1 40919 41332 ( 414 n); cDNA 149 558 ( 410 n); score: 0.884 MATCH C08HBa0235H18.1+ SGN-E353160- 0.884 414 0.742 C PGS_C08HBa0235H18.1+_SGN-E353160- (40919 41332) Alignment (genomic DNA sequence = upper lines): AAATATGCTT TATTGTGGCA TCAATTATGG GCAAAAAACA ACCCTATAAT TTGTACTACC 40978 |||| || || || || | |||| || ||||||||| |||||||||| |||||||||| AAATTTGGGC TA--GTAACA -CCATTA-GG ACAAAAAACA ACCCTATAAT TTGTACTACC 204 ACTAGGGCAA GTGAATAAGC TAGTAGGATC ATCTTGAGGG TAGCTATACG CATTAGGGCA 41038 |||||||||| || ||| || |||||||||| |||||| ||| |||||||||| ||| ||| || ACTAGGGCAA GTAAATGTGC TAGTAGGATC ATCTTGTGGG TAGCTATACG CATCAGGACA 264 CCTTTGTTTG AAAAATCTCG AAAATTTTGT AGGACCACAT GGGCCTTGAG TACAACAATA 41098 ||||||||| |||||||||| | || | || ||| |||||| || ||||| | | |||||||| TCTTTGTTTG AAAAATCTCG ACAAATCAGT AGGGCCACAT GGACCTTGTG TGCAACAATA 324 TTGTTGTCCT CCGAACGTGG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGGACT 41158 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||| || TTGTTGTCCT CCGAACGTGG TACAAGGATT GTTACATCCT CCGGGTACCC TAAGTGAACC 384 AGGGCATTCA CCGTTTATAT TAGCCGTGCA ATGAATTGCA TGGCATTTTC CTCCACTAGG 41218 ||| |||||| || ||||||| ||||||| || |||||||||| |||||||| | |||||||||| AGGACATTCA CCATTTATAT TAGCCGTACA ATGAATTGCA TGGCATTTCC CTCCACTAGG 444 ATTGGTTGGG GCGAAAGTCA TCGGTATATT AAATCCGTCA ACCAAAGAAA TGTCCCAGAA 41278 |||||| ||| |||||||||| | || ||||| |||||| || || ||||||| |||||||||| ATTGGTCGGG GCGAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAGAA 504 ATCTAGGTTG CTGAATTGGT CCAAAGCATA TTCAGCTAGG GTGTTTGGGG GTTT 41332 |||||||||| || || |||| |||| || || || || ||| |||||||| | |||| ATCTAGGTTG CTAAACTGGT CCAAGGCGTA CTCGGCCAGG GTGTTTGGTG GTTT 558 hqPGS_C08HBa0235H18.1+_SGN-E353160- (40919 41332) ******************************************************************************** EST sequence 1188 -strand 561 n (File: SGN-E355505-) 1 TTTTTTTTTT TGTGATGATG TGACTTTTAT TCATGTAATT ATATTAGGTT TATTACAAGC 61 CAATTATATA ACTCGACTAC TTCAAGCAAT TTAAAAGAAA GTGACTCAAT TTTACTTAGC 121 CTCTTCATCA CTTGAGGGCA TCTCCAAGGG GAAATTTGGG CTAGTAACAC CATTAGGACA 181 AAAAACAACC CTATAATTTG TACTACCACT AGGGCAAGTA AATGTGCTAG TAGGATCATC 241 TTGTGGGTAG CTATACGCAT CAGGACATCT TTGTTTGAAA AATCTCGACA AATCAGTAGG 301 GCCACATGGA CCTTGTGTGC AACAATATTG TTGTCCTCCG AACGTGGTAC AAGGATTGTT 361 ACATCCTCCG GGTACCCTAA GTGAACCAGG ACATTCACCA TTTATATTAG CCGTACAATG 421 AATTGCATGG CATTTCCCTC CACTAGGATT GGTCGGGGCG AAAGTCATTG GAATATTAAA 481 TCCATCGACT AAAGAAATGT CCCAGAAATC TAGGTTGCTA AACTGGTCCA AGGCGTACTC 541 GGCCAGGGTG TTTGGTGGTT T Predicted gene structure (within gDNA segment 38560 to 44622): Exon 1 40919 41332 ( 414 n); cDNA 152 561 ( 410 n); score: 0.884 PPA cDNA 13 1 MATCH C08HBa0235H18.1+ SGN-E355505- 0.884 414 0.738 C PGS_C08HBa0235H18.1+_SGN-E355505- (40919 41332) Alignment (genomic DNA sequence = upper lines): AAATATGCTT TATTGTGGCA TCAATTATGG GCAAAAAACA ACCCTATAAT TTGTACTACC 40978 |||| || || || || | |||| || ||||||||| |||||||||| |||||||||| AAATTTGGGC TA--GTAACA -CCATTA-GG ACAAAAAACA ACCCTATAAT TTGTACTACC 207 ACTAGGGCAA GTGAATAAGC TAGTAGGATC ATCTTGAGGG TAGCTATACG CATTAGGGCA 41038 |||||||||| || ||| || |||||||||| |||||| ||| |||||||||| ||| ||| || ACTAGGGCAA GTAAATGTGC TAGTAGGATC ATCTTGTGGG TAGCTATACG CATCAGGACA 267 CCTTTGTTTG AAAAATCTCG AAAATTTTGT AGGACCACAT GGGCCTTGAG TACAACAATA 41098 ||||||||| |||||||||| | || | || ||| |||||| || ||||| | | |||||||| TCTTTGTTTG AAAAATCTCG ACAAATCAGT AGGGCCACAT GGACCTTGTG TGCAACAATA 327 TTGTTGTCCT CCGAACGTGG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGGACT 41158 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||| || TTGTTGTCCT CCGAACGTGG TACAAGGATT GTTACATCCT CCGGGTACCC TAAGTGAACC 387 AGGGCATTCA CCGTTTATAT TAGCCGTGCA ATGAATTGCA TGGCATTTTC CTCCACTAGG 41218 ||| |||||| || ||||||| ||||||| || |||||||||| |||||||| | |||||||||| AGGACATTCA CCATTTATAT TAGCCGTACA ATGAATTGCA TGGCATTTCC CTCCACTAGG 447 ATTGGTTGGG GCGAAAGTCA TCGGTATATT AAATCCGTCA ACCAAAGAAA TGTCCCAGAA 41278 |||||| ||| |||||||||| | || ||||| |||||| || || ||||||| |||||||||| ATTGGTCGGG GCGAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAGAA 507 ATCTAGGTTG CTGAATTGGT CCAAAGCATA TTCAGCTAGG GTGTTTGGGG GTTT 41332 |||||||||| || || |||| |||| || || || || ||| |||||||| | |||| ATCTAGGTTG CTAAACTGGT CCAAGGCGTA CTCGGCCAGG GTGTTTGGTG GTTT 561 hqPGS_C08HBa0235H18.1+_SGN-E355505- (40919 41332) ******************************************************************************** EST sequence 1198 -strand 540 n (File: SGN-E355527-) 1 TTTTTTTTTT TGTGATGATG TGACTTTTAT TCATGTAATT ATATTAGGTT TATTACAAGC 61 CAATTATATA ACTCGACTAC TTCAAGCAAT TTAAAAGAAA GTGACTCAAT TTTACTTAGC 121 CTCTTCATCA CTTGAGGGCA TCTCCAAGGG GAAATTTGGG CTAGTAACAC CATTAGGACA 181 AAAAACAACC CTATAATTTG TACTACCACT AGGGCAAGTA AATGTGCTAG TAGGATCATC 241 TTGTGGGTAG CTATACGCAT CAGGACATCT TTGTTTGAAA AATCTCGACA AATCAGTAGG 301 GCCACATGGA CCTTGTGTGC AACAATATTG TTGTCCTCCG AACGTGGTAC AAGGATTGTT 361 ACATCCTCCG GGTACCCTAA GTGAACCAGG ACATTCACCA TTTATATTAG CCGTACAATG 421 AATTGCATGG CATTTCCCTC CACTAGGATT GGTCGGGGCG AAAGTCATTG GAATATTAAA 481 TCCATCGACT AAAGAAATGT CCCAGAAATC TAGGTTGCTA AACTGGTCCA AGGCGTACTC Predicted gene structure (within gDNA segment 38560 to 44412): Exon 1 40919 41311 ( 393 n); cDNA 152 540 ( 389 n); score: 0.885 PPA cDNA 13 1 MATCH C08HBa0235H18.1+ SGN-E355527- 0.885 393 0.728 C PGS_C08HBa0235H18.1+_SGN-E355527- (40919 41311) Alignment (genomic DNA sequence = upper lines): AAATATGCTT TATTGTGGCA TCAATTATGG GCAAAAAACA ACCCTATAAT TTGTACTACC 40978 |||| || || || || | |||| || ||||||||| |||||||||| |||||||||| AAATTTGGGC TA--GTAACA -CCATTA-GG ACAAAAAACA ACCCTATAAT TTGTACTACC 207 ACTAGGGCAA GTGAATAAGC TAGTAGGATC ATCTTGAGGG TAGCTATACG CATTAGGGCA 41038 |||||||||| || ||| || |||||||||| |||||| ||| |||||||||| ||| ||| || ACTAGGGCAA GTAAATGTGC TAGTAGGATC ATCTTGTGGG TAGCTATACG CATCAGGACA 267 CCTTTGTTTG AAAAATCTCG AAAATTTTGT AGGACCACAT GGGCCTTGAG TACAACAATA 41098 ||||||||| |||||||||| | || | || ||| |||||| || ||||| | | |||||||| TCTTTGTTTG AAAAATCTCG ACAAATCAGT AGGGCCACAT GGACCTTGTG TGCAACAATA 327 TTGTTGTCCT CCGAACGTGG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGGACT 41158 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||| || TTGTTGTCCT CCGAACGTGG TACAAGGATT GTTACATCCT CCGGGTACCC TAAGTGAACC 387 AGGGCATTCA CCGTTTATAT TAGCCGTGCA ATGAATTGCA TGGCATTTTC CTCCACTAGG 41218 ||| |||||| || ||||||| ||||||| || |||||||||| |||||||| | |||||||||| AGGACATTCA CCATTTATAT TAGCCGTACA ATGAATTGCA TGGCATTTCC CTCCACTAGG 447 ATTGGTTGGG GCGAAAGTCA TCGGTATATT AAATCCGTCA ACCAAAGAAA TGTCCCAGAA 41278 |||||| ||| |||||||||| | || ||||| |||||| || || ||||||| |||||||||| ATTGGTCGGG GCGAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAGAA 507 ATCTAGGTTG CTGAATTGGT CCAAAGCATA TTC 41311 |||||||||| || || |||| |||| || || || ATCTAGGTTG CTAAACTGGT CCAAGGCGTA CTC 540 hqPGS_C08HBa0235H18.1+_SGN-E355527- (40919 41311) ******************************************************************************** EST sequence 475 -strand 533 n (File: SGN-E351103-) 1 TTTTTTTTTT GTGATGATGT GACTTTTATT CATGTAATTA TATTAGGTTT ATTACAAGCC 61 AATTATATAA CTCGACTACT TCAAGCAATT TAAAAGAAAG TGACTCAATT TTACTTAGCC 121 TCTTCATCAC TTGAGGGCAT CTCCAAGGGG AAATTTGGGC TAGTAACACC ATTAGGACAA 181 AAAACAACCC TATAATTTGT ACTACCACTA GGGCAAGTAA ATGTGCTAGT AGGATCATCT 241 TGTGGGTAGC TATACGCATC AGGACATCTT TGTTTGAAAA ATCTCGACAA ATCAGTAGGG 301 CCACATGGAC CTTGTGTGCA ACAATATTGT TGTCCTCCGA ACGTGGTACA AGGATTGTTA 361 CATCCTCCGG GTACCCTAAG TGAACCAGGA CATTCACCAT TTATATTAGC CGTACAATGA 421 ATTGCATGGC ATTTCCCTCC ACTAGGATTG GTCGGGGCGA AAGTCATTGG AATATTAAAT 481 CCATCGACTA AAGAAATGTC CCAGAAATCT AGGTTGCTAA ACTGGTCCAA GGC Predicted gene structure (within gDNA segment 38570 to 44352): Exon 1 40919 41305 ( 387 n); cDNA 151 533 ( 383 n); score: 0.889 PPA cDNA 12 1 MATCH C08HBa0235H18.1+ SGN-E351103- 0.889 387 0.726 C PGS_C08HBa0235H18.1+_SGN-E351103- (40919 41305) Alignment (genomic DNA sequence = upper lines): AAATATGCTT TATTGTGGCA TCAATTATGG GCAAAAAACA ACCCTATAAT TTGTACTACC 40978 |||| || || || || | |||| || ||||||||| |||||||||| |||||||||| AAATTTGGGC TA--GTAACA -CCATTA-GG ACAAAAAACA ACCCTATAAT TTGTACTACC 206 ACTAGGGCAA GTGAATAAGC TAGTAGGATC ATCTTGAGGG TAGCTATACG CATTAGGGCA 41038 |||||||||| || ||| || |||||||||| |||||| ||| |||||||||| ||| ||| || ACTAGGGCAA GTAAATGTGC TAGTAGGATC ATCTTGTGGG TAGCTATACG CATCAGGACA 266 CCTTTGTTTG AAAAATCTCG AAAATTTTGT AGGACCACAT GGGCCTTGAG TACAACAATA 41098 ||||||||| |||||||||| | || | || ||| |||||| || ||||| | | |||||||| TCTTTGTTTG AAAAATCTCG ACAAATCAGT AGGGCCACAT GGACCTTGTG TGCAACAATA 326 TTGTTGTCCT CCGAACGTGG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGGACT 41158 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||| || TTGTTGTCCT CCGAACGTGG TACAAGGATT GTTACATCCT CCGGGTACCC TAAGTGAACC 386 AGGGCATTCA CCGTTTATAT TAGCCGTGCA ATGAATTGCA TGGCATTTTC CTCCACTAGG 41218 ||| |||||| || ||||||| ||||||| || |||||||||| |||||||| | |||||||||| AGGACATTCA CCATTTATAT TAGCCGTACA ATGAATTGCA TGGCATTTCC CTCCACTAGG 446 ATTGGTTGGG GCGAAAGTCA TCGGTATATT AAATCCGTCA ACCAAAGAAA TGTCCCAGAA 41278 |||||| ||| |||||||||| | || ||||| |||||| || || ||||||| |||||||||| ATTGGTCGGG GCGAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAGAA 506 ATCTAGGTTG CTGAATTGGT CCAAAGC 41305 |||||||||| || || |||| |||| || ATCTAGGTTG CTAAACTGGT CCAAGGC 533 hqPGS_C08HBa0235H18.1+_SGN-E351103- (40919 41305) ******************************************************************************** EST sequence 1162 -strand 533 n (File: SGN-E357512-) 1 TTTTTTTTTT GTGATGATGT GACTTTTATT CATGTAATTA TATTAGGTTT ATTACAAGCC 61 AATTATATAA CTCGACTACT TCAAGCAATT TAAAAGAAAG TGACTCAATT TTACTTAGCC 121 TCTTCATCAC TTGAGGGCAT CTCCAAGGGG AAATTTGGGC TAGTAACACC ATTAGGACAA 181 AAAACAACCC TATAATTTGT ACTACCACTA GGGCAAGTAA ATGTGCTAGT AGGATCATCT 241 AGTGGGTAGC TATACGCATC AGGACATCTT TGTTTGAAAA ATCTCGACAA ATCAGTAGGG 301 CCACATGGAC CTTGTGTGCA ACAATATTGT TGTCCTCCGA ACGTGGTACA AGGATTGTTA 361 CATCCTCCGG GTACCCTAAG TGAACCAGGA CATTCACCAT TTATATTAGC CGTACAATGA 421 ATTGCATGGC ATTTCCCTCC ACTAGGATTG GTCGGGGCGA AAGTCATTGG AATATTAAAT 481 CCATCGACTG GAGAAATGTC CCAGAAATCT AGGTTGCTAA ACTGGTCCAA GGC Predicted gene structure (within gDNA segment 38570 to 44352): Exon 1 40919 41305 ( 387 n); cDNA 151 533 ( 383 n); score: 0.881 PPA cDNA 12 1 MATCH C08HBa0235H18.1+ SGN-E357512- 0.881 387 0.726 C PGS_C08HBa0235H18.1+_SGN-E357512- (40919 41305) Alignment (genomic DNA sequence = upper lines): AAATATGCTT TATTGTGGCA TCAATTATGG GCAAAAAACA ACCCTATAAT TTGTACTACC 40978 |||| || || || || | |||| || ||||||||| |||||||||| |||||||||| AAATTTGGGC TA--GTAACA -CCATTA-GG ACAAAAAACA ACCCTATAAT TTGTACTACC 206 ACTAGGGCAA GTGAATAAGC TAGTAGGATC ATCTTGAGGG TAGCTATACG CATTAGGGCA 41038 |||||||||| || ||| || |||||||||| |||| | ||| |||||||||| ||| ||| || ACTAGGGCAA GTAAATGTGC TAGTAGGATC ATCTAGTGGG TAGCTATACG CATCAGGACA 266 CCTTTGTTTG AAAAATCTCG AAAATTTTGT AGGACCACAT GGGCCTTGAG TACAACAATA 41098 ||||||||| |||||||||| | || | || ||| |||||| || ||||| | | |||||||| TCTTTGTTTG AAAAATCTCG ACAAATCAGT AGGGCCACAT GGACCTTGTG TGCAACAATA 326 TTGTTGTCCT CCGAACGTGG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGGACT 41158 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||| || TTGTTGTCCT CCGAACGTGG TACAAGGATT GTTACATCCT CCGGGTACCC TAAGTGAACC 386 AGGGCATTCA CCGTTTATAT TAGCCGTGCA ATGAATTGCA TGGCATTTTC CTCCACTAGG 41218 ||| |||||| || ||||||| ||||||| || |||||||||| |||||||| | |||||||||| AGGACATTCA CCATTTATAT TAGCCGTACA ATGAATTGCA TGGCATTTCC CTCCACTAGG 446 ATTGGTTGGG GCGAAAGTCA TCGGTATATT AAATCCGTCA ACCAAAGAAA TGTCCCAGAA 41278 |||||| ||| |||||||||| | || ||||| |||||| || || ||||| |||||||||| ATTGGTCGGG GCGAAAGTCA TTGGAATATT AAATCCATCG ACTGGAGAAA TGTCCCAGAA 506 ATCTAGGTTG CTGAATTGGT CCAAAGC 41305 |||||||||| || || |||| |||| || ATCTAGGTTG CTAAACTGGT CCAAGGC 533 hqPGS_C08HBa0235H18.1+_SGN-E357512- (40919 41305) ******************************************************************************** EST sequence 507 -strand 530 n (File: SGN-E350942-) 1 TTTTTTTTTT GTGATGATGT GACTTTTATT CATGTAATTA TATTAGGTTT ATTACAAGCC 61 AATTATATAA CTCGACTACT TCAAGCAATT TAAAAGAAAG TGACTCAATT TTACTTAGCC 121 TCTTCATCAC TTGAGGGCAT CTCCAAGGGG AAATTTGGGC TAGTAACACC ATTAGGACAA 181 AAAACAACCC TATAATTTGT ACTACCACTA GGGCAAGTAA ATGTGCTAGT AGGATCATCT 241 TGTGGGTAGC TATACGCATC AGGACATCTT TGTTTGAAAA ATCTCGACAA ATCAGTAGGG 301 CCACATGGAC CTTGTGTGCA ACAATATTGT TGTCCTCCGA ACGTGGTACA AGGATTGTTA 361 CATCCTCCGG GTACCCTAAG TGAACCAGGA CATTCACCAT TTATATTAGC CGTACAATGA 421 ATTGCATGGC ATTTCCCTCC ACTAGGATTG GTCGGGGCGA AAGTCATTGG AATATTAAAT 481 CCATCGACTA AAGAAATGTC CCAGAAATCT AGGTTGCTAA ACTGGTCCAA Predicted gene structure (within gDNA segment 38570 to 44322): Exon 1 40919 41302 ( 384 n); cDNA 151 530 ( 380 n); score: 0.891 PPA cDNA 12 1 MATCH C08HBa0235H18.1+ SGN-E350942- 0.891 384 0.725 C PGS_C08HBa0235H18.1+_SGN-E350942- (40919 41302) Alignment (genomic DNA sequence = upper lines): AAATATGCTT TATTGTGGCA TCAATTATGG GCAAAAAACA ACCCTATAAT TTGTACTACC 40978 |||| || || || || | |||| || ||||||||| |||||||||| |||||||||| AAATTTGGGC TA--GTAACA -CCATTA-GG ACAAAAAACA ACCCTATAAT TTGTACTACC 206 ACTAGGGCAA GTGAATAAGC TAGTAGGATC ATCTTGAGGG TAGCTATACG CATTAGGGCA 41038 |||||||||| || ||| || |||||||||| |||||| ||| |||||||||| ||| ||| || ACTAGGGCAA GTAAATGTGC TAGTAGGATC ATCTTGTGGG TAGCTATACG CATCAGGACA 266 CCTTTGTTTG AAAAATCTCG AAAATTTTGT AGGACCACAT GGGCCTTGAG TACAACAATA 41098 ||||||||| |||||||||| | || | || ||| |||||| || ||||| | | |||||||| TCTTTGTTTG AAAAATCTCG ACAAATCAGT AGGGCCACAT GGACCTTGTG TGCAACAATA 326 TTGTTGTCCT CCGAACGTGG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGGACT 41158 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||| || TTGTTGTCCT CCGAACGTGG TACAAGGATT GTTACATCCT CCGGGTACCC TAAGTGAACC 386 AGGGCATTCA CCGTTTATAT TAGCCGTGCA ATGAATTGCA TGGCATTTTC CTCCACTAGG 41218 ||| |||||| || ||||||| ||||||| || |||||||||| |||||||| | |||||||||| AGGACATTCA CCATTTATAT TAGCCGTACA ATGAATTGCA TGGCATTTCC CTCCACTAGG 446 ATTGGTTGGG GCGAAAGTCA TCGGTATATT AAATCCGTCA ACCAAAGAAA TGTCCCAGAA 41278 |||||| ||| |||||||||| | || ||||| |||||| || || ||||||| |||||||||| ATTGGTCGGG GCGAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAGAA 506 ATCTAGGTTG CTGAATTGGT CCAA 41302 |||||||||| || || |||| |||| ATCTAGGTTG CTAAACTGGT CCAA 530 hqPGS_C08HBa0235H18.1+_SGN-E350942- (40919 41302) ******************************************************************************** EST sequence 529 -strand 521 n (File: SGN-E351796-) 1 TTTTTTTTTT GTGATGATGT GACTTTTATT CATGTAATTA TATTAGGTTT ATTACAAGCC 61 AATTATATAA CTCGACTACT TCAAGCAATT TAAAAGAAAG TGACTCAATT TTACTTAGCC 121 TCTTCATCAC TTGAGGGCAT CTCCAAGGGG AAATTTGGGC TAGTAACACC ATTAGGACAA 181 AAAACAACCC TATAATTTGT ACTACCACTA GGGCAAGTAA ATGTGCTAGT AGGATCATCT 241 TGTGGGTAGC TATACGCATC AGGACATCTT TGTTTGAAAA ATCTCGACAA ATCAGTAGGG 301 CCACATGGAC CTTGTGTGCA ACAATATTGT TGTCCTCCGA ACGTGGTACA AGGATTGTTA 361 CATCCTCCGG GTACCCTAAG TGAACCAGGA CATTCACCAT TTATATTAGC CGTACAATGA 421 ATTGCATGGC ATTTCCCTCC ACTAGGATTG GTCGGGGCGA AAGTCATTGG AATATTAAAT 481 CCATCGACTA AAGAAATGTC CCAGAAATCT AGGTTGCTAA A Predicted gene structure (within gDNA segment 38570 to 44232): Exon 1 40919 41293 ( 375 n); cDNA 151 521 ( 371 n); score: 0.891 PPA cDNA 12 1 MATCH C08HBa0235H18.1+ SGN-E351796- 0.891 375 0.720 C PGS_C08HBa0235H18.1+_SGN-E351796- (40919 41293) Alignment (genomic DNA sequence = upper lines): AAATATGCTT TATTGTGGCA TCAATTATGG GCAAAAAACA ACCCTATAAT TTGTACTACC 40978 |||| || || || || | |||| || ||||||||| |||||||||| |||||||||| AAATTTGGGC TA--GTAACA -CCATTA-GG ACAAAAAACA ACCCTATAAT TTGTACTACC 206 ACTAGGGCAA GTGAATAAGC TAGTAGGATC ATCTTGAGGG TAGCTATACG CATTAGGGCA 41038 |||||||||| || ||| || |||||||||| |||||| ||| |||||||||| ||| ||| || ACTAGGGCAA GTAAATGTGC TAGTAGGATC ATCTTGTGGG TAGCTATACG CATCAGGACA 266 CCTTTGTTTG AAAAATCTCG AAAATTTTGT AGGACCACAT GGGCCTTGAG TACAACAATA 41098 ||||||||| |||||||||| | || | || ||| |||||| || ||||| | | |||||||| TCTTTGTTTG AAAAATCTCG ACAAATCAGT AGGGCCACAT GGACCTTGTG TGCAACAATA 326 TTGTTGTCCT CCGAACGTGG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGGACT 41158 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||| || TTGTTGTCCT CCGAACGTGG TACAAGGATT GTTACATCCT CCGGGTACCC TAAGTGAACC 386 AGGGCATTCA CCGTTTATAT TAGCCGTGCA ATGAATTGCA TGGCATTTTC CTCCACTAGG 41218 ||| |||||| || ||||||| ||||||| || |||||||||| |||||||| | |||||||||| AGGACATTCA CCATTTATAT TAGCCGTACA ATGAATTGCA TGGCATTTCC CTCCACTAGG 446 ATTGGTTGGG GCGAAAGTCA TCGGTATATT AAATCCGTCA ACCAAAGAAA TGTCCCAGAA 41278 |||||| ||| |||||||||| | || ||||| |||||| || || ||||||| |||||||||| ATTGGTCGGG GCGAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAGAA 506 ATCTAGGTTG CTGAA 41293 |||||||||| || || ATCTAGGTTG CTAAA 521 hqPGS_C08HBa0235H18.1+_SGN-E351796- (40919 41293) ******************************************************************************** EST sequence 231 +strand 520 n (File: SGN-E295085+) 1 AGAGAACTAG TCTGAGTTTT TTTTTTTTTT TTTTTGTGAT GATGTGACTT TTATTCATGT 61 AATTATATTA GGTTTATTAC AAGCCAATTA TATAACTCGA CTACTTCAAG CAATTTAAAA 121 GAAAGTGACT CAATTTTACT TAGCCTCTTC ATCACTTGAG GGCATCTCCA AGGGGAAATT 181 TGGGCTAGTA ACACCATTAG GACAAAAAAC AACCCTATAA TTTGTACTAC CACTAGGGCA 241 AGTAAATGTG CTAGTAGGAT CATCTTGTGG GTAGCTATAC GCATCAGGAC ATCTTTGTTT 301 GAAAAATCTC GACAAATCAG TAGGGCCACA TGGACCTTGT GTGCAACAAT ATTGTTGTCC 361 TCCGAACGTG GTACAAGGAT TGTTACATCC TCCGGGTACC CTAAGTGAAC CAGGACATTC 421 ACCATTTATA TTAGCCGTAC AATGAATTGC ATGGCATTTC CCTCCACTAG GATTGGTCGG 481 GGCGAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA Predicted gene structure (within gDNA segment 39382 to 45296): Exon 1 40919 41267 ( 349 n); cDNA 176 520 ( 345 n); score: 0.885 PPA cDNA 37 17 MATCH C08HBa0235H18.1+ SGN-E295085+ 0.885 349 0.671 C PGS_C08HBa0235H18.1+_SGN-E295085+ (40919 41267) Alignment (genomic DNA sequence = upper lines): AAATATGCTT TATTGTGGCA TCAATTATGG GCAAAAAACA ACCCTATAAT TTGTACTACC 40978 |||| || || || || | |||| || ||||||||| |||||||||| |||||||||| AAATTTGGGC TA--GTAACA -CCATTA-GG ACAAAAAACA ACCCTATAAT TTGTACTACC 231 ACTAGGGCAA GTGAATAAGC TAGTAGGATC ATCTTGAGGG TAGCTATACG CATTAGGGCA 41038 |||||||||| || ||| || |||||||||| |||||| ||| |||||||||| ||| ||| || ACTAGGGCAA GTAAATGTGC TAGTAGGATC ATCTTGTGGG TAGCTATACG CATCAGGACA 291 CCTTTGTTTG AAAAATCTCG AAAATTTTGT AGGACCACAT GGGCCTTGAG TACAACAATA 41098 ||||||||| |||||||||| | || | || ||| |||||| || ||||| | | |||||||| TCTTTGTTTG AAAAATCTCG ACAAATCAGT AGGGCCACAT GGACCTTGTG TGCAACAATA 351 TTGTTGTCCT CCGAACGTGG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGGACT 41158 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||| || TTGTTGTCCT CCGAACGTGG TACAAGGATT GTTACATCCT CCGGGTACCC TAAGTGAACC 411 AGGGCATTCA CCGTTTATAT TAGCCGTGCA ATGAATTGCA TGGCATTTTC CTCCACTAGG 41218 ||| |||||| || ||||||| ||||||| || |||||||||| |||||||| | |||||||||| AGGACATTCA CCATTTATAT TAGCCGTACA ATGAATTGCA TGGCATTTCC CTCCACTAGG 471 ATTGGTTGGG GCGAAAGTCA TCGGTATATT AAATCCGTCA ACCAAAGAA 41267 |||||| ||| |||||||||| | || ||||| |||||| || || |||||| ATTGGTCGGG GCGAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAA 520 hqPGS_C08HBa0235H18.1+_SGN-E295085+ (40919 41267) ******************************************************************************** EST sequence 1228 -strand 498 n (File: SGN-E349779-) 1 TTTTTTTTTT TTTTTTNTTT TTCGAAACAA CATATTTGTG ATGATGTGAC TTTTATTCAT 61 GTAATTATAT TAGGTTTATT ACAAGCCAAT TATATAACTC GACTACTTCA AGCAATTTAA 121 AAGAAAGTGA CTCAATTTTA CTTAGCCTCT TCATCACTTG AGGGCATCTC CAAGGGGAAA 181 TTTGGGCTAG TAACACCATT AGGACAAAAA ACAACCCTAT AATTTGTACT ACCACTAGGG 241 CAAGTAAATG TGCTAGTAGG ATCATCTTGT GGGTAGCTAT ACGCATCAGG ACATCTTTGT 301 TTGAAAAATC TCGACAAATC AGTAGGGCCA CATGGACCTT GTGTGCAACA ATATTGTTGT 361 CCTCCGAACG TGGTACAAGG ATTGTTACAT CCTCCGGGTA CCCTAAGTGA ACCAGGACAT 421 TCACCATTTA TATTAGCCGT ACAATGAATT GCATGGCATT TCCCTCCACT AGGATTGGTC 481 GGGGCGAAAG TCATTGGA Predicted gene structure (within gDNA segment 38300 to 42014): Exon 1 40919 41242 ( 324 n); cDNA 178 497 ( 320 n); score: 0.889 PPA cDNA 22 1 MATCH C08HBa0235H18.1+ SGN-E349779- 0.889 324 0.651 C PGS_C08HBa0235H18.1+_SGN-E349779- (40919 41242) Alignment (genomic DNA sequence = upper lines): AAATATGCTT TATTGTGGCA TCAATTATGG GCAAAAAACA ACCCTATAAT TTGTACTACC 40978 |||| || || || || | |||| || ||||||||| |||||||||| |||||||||| AAATTTGGGC TA--GTAACA -CCATTA-GG ACAAAAAACA ACCCTATAAT TTGTACTACC 233 ACTAGGGCAA GTGAATAAGC TAGTAGGATC ATCTTGAGGG TAGCTATACG CATTAGGGCA 41038 |||||||||| || ||| || |||||||||| |||||| ||| |||||||||| ||| ||| || ACTAGGGCAA GTAAATGTGC TAGTAGGATC ATCTTGTGGG TAGCTATACG CATCAGGACA 293 CCTTTGTTTG AAAAATCTCG AAAATTTTGT AGGACCACAT GGGCCTTGAG TACAACAATA 41098 ||||||||| |||||||||| | || | || ||| |||||| || ||||| | | |||||||| TCTTTGTTTG AAAAATCTCG ACAAATCAGT AGGGCCACAT GGACCTTGTG TGCAACAATA 353 TTGTTGTCCT CCGAACGTGG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGGACT 41158 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||| || TTGTTGTCCT CCGAACGTGG TACAAGGATT GTTACATCCT CCGGGTACCC TAAGTGAACC 413 AGGGCATTCA CCGTTTATAT TAGCCGTGCA ATGAATTGCA TGGCATTTTC CTCCACTAGG 41218 ||| |||||| || ||||||| ||||||| || |||||||||| |||||||| | |||||||||| AGGACATTCA CCATTTATAT TAGCCGTACA ATGAATTGCA TGGCATTTCC CTCCACTAGG 473 ATTGGTTGGG GCGAAAGTCA TCGG 41242 |||||| ||| |||||||||| | || ATTGGTCGGG GCGAAAGTCA TTGG 497 hqPGS_C08HBa0235H18.1+_SGN-E349779- (40919 41242) ******************************************************************************** EST sequence 877 -strand 487 n (File: SGN-E299150-) 1 AAGTTAATAC GTAAATATCA AAATATACAT AAAATAATAT TCGAAACAAC ATATTTGTGA 61 TGATGAGACT TTTATTCATG TAATTATATT AGGTTTATTA CAAGCCAATT ATATAACTCG 121 ACTACTTCAA GCAATTTAAA AGAAAGTGAC TCAATTTTAC TTAGCCTCTT CATCACTTGA 181 GGGCATCTCC AAGGGGAAAT TTGGGCTAGT AACACCATTA GGACAAAAAA CAACCCTATA 241 ATTTGTACTA CCACTAGGGC AAGTAAATGT GCTAGTAGGA TCATCTTGTG GGTAGCTATA 301 CGCATCAGGA CATCTTTGTT TGAAAAATCT CGACAAATCA GTAGGGCCAC ATGGACCTTG 361 TGTGCAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGA TTGTTACATC CTCCGGGTAC 421 CCTAAGTGAA CCAGGACATT CACCATTTAT ATTAGCCGAA CAATGAATTG CATGGCATTT 481 CCCTCCA Predicted gene structure (within gDNA segment 38110 to 42344): Exon 1 40919 41213 ( 295 n); cDNA 197 487 ( 291 n); score: 0.881 MATCH C08HBa0235H18.1+ SGN-E299150- 0.881 295 0.606 C PGS_C08HBa0235H18.1+_SGN-E299150- (40919 41213) Alignment (genomic DNA sequence = upper lines): AAATATGCTT TATTGTGGCA TCAATTATGG GCAAAAAACA ACCCTATAAT TTGTACTACC 40978 |||| || || || || | |||| || ||||||||| |||||||||| |||||||||| AAATTTGGGC TA--GTAACA -CCATTA-GG ACAAAAAACA ACCCTATAAT TTGTACTACC 252 ACTAGGGCAA GTGAATAAGC TAGTAGGATC ATCTTGAGGG TAGCTATACG CATTAGGGCA 41038 |||||||||| || ||| || |||||||||| |||||| ||| |||||||||| ||| ||| || ACTAGGGCAA GTAAATGTGC TAGTAGGATC ATCTTGTGGG TAGCTATACG CATCAGGACA 312 CCTTTGTTTG AAAAATCTCG AAAATTTTGT AGGACCACAT GGGCCTTGAG TACAACAATA 41098 ||||||||| |||||||||| | || | || ||| |||||| || ||||| | | |||||||| TCTTTGTTTG AAAAATCTCG ACAAATCAGT AGGGCCACAT GGACCTTGTG TGCAACAATA 372 TTGTTGTCCT CCGAACGTGG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGGACT 41158 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||| || TTGTTGTCCT CCGAACGTGG TACAAGGATT GTTACATCCT CCGGGTACCC TAAGTGAACC 432 AGGGCATTCA CCGTTTATAT TAGCCGTGCA ATGAATTGCA TGGCATTTTC CTCCA 41213 ||| |||||| || ||||||| |||||| || |||||||||| |||||||| | ||||| AGGACATTCA CCATTTATAT TAGCCGAACA ATGAATTGCA TGGCATTTCC CTCCA 487 hqPGS_C08HBa0235H18.1+_SGN-E299150- (40919 41213) ******************************************************************************** EST sequence 1147 -strand 335 n (File: SGN-E310110-) 1 TTTTTTTTTT GTGATGATGT GACTTTTATT CATGTAATTA TATTAGGTTT ATTACAAGCC 61 AATTATATAA CTCGACTACT TCAAGCAATT TAAAAGAAAG TGACTCAATT TTACTTAGCC 121 TCTTCATCAC TTGAGGGCAT CTCCAAGGGG AAATTTGGGC TAGTAACACC ATTAGGACAA 181 AAAACAACCC TATAATTTGT ACTACCACTA GGGCAAGTAA ATGTGCTAGT AGGATCATCT 241 TGTGGGTAGC TATACGCATC AGGACATCTT TGTTTGAAAA ATCTCGACAA ATCAGTAGGG 301 CCACATGGAC CTTGTGTGCA ACAATATTGT TGTCC Predicted gene structure (within gDNA segment 38570 to 42139): Exon 1 40919 41107 ( 189 n); cDNA 151 335 ( 185 n); score: 0.857 PPA cDNA 12 1 MATCH C08HBa0235H18.1+ SGN-E310110- 0.857 189 0.564 C PGS_C08HBa0235H18.1+_SGN-E310110- (40919 41107) Alignment (genomic DNA sequence = upper lines): AAATATGCTT TATTGTGGCA TCAATTATGG GCAAAAAACA ACCCTATAAT TTGTACTACC 40978 |||| || || || || | |||| || ||||||||| |||||||||| |||||||||| AAATTTGGGC TA--GTAACA -CCATTA-GG ACAAAAAACA ACCCTATAAT TTGTACTACC 206 ACTAGGGCAA GTGAATAAGC TAGTAGGATC ATCTTGAGGG TAGCTATACG CATTAGGGCA 41038 |||||||||| || ||| || |||||||||| |||||| ||| |||||||||| ||| ||| || ACTAGGGCAA GTAAATGTGC TAGTAGGATC ATCTTGTGGG TAGCTATACG CATCAGGACA 266 CCTTTGTTTG AAAAATCTCG AAAATTTTGT AGGACCACAT GGGCCTTGAG TACAACAATA 41098 ||||||||| |||||||||| | || | || ||| |||||| || ||||| | | |||||||| TCTTTGTTTG AAAAATCTCG ACAAATCAGT AGGGCCACAT GGACCTTGTG TGCAACAATA 326 TTGTTGTCC 41107 ||||||||| TTGTTGTCC 335 hqPGS_C08HBa0235H18.1+_SGN-E310110- (40919 41107) ******************************************************************************** EST sequence 493 -strand 321 n (File: SGN-E350856-) 1 TTTTTTTTTT GTGATGATGT GACTTTTATT CATGTAATTA TATTAGGTTT ATTACAAGCC 61 AATTATATAA CTCGACTACT TCAAGCAATT TAAAAGAAAG TGACTCAATT TTACTTAGCC 121 TCTTCATCAC TTGAGGGCAT CTCCAAGGGG AAATTTGGGC TAGTAACACC ATTAGGACAA 181 AAAACAACCC TATAATTTGT ACTACCACTA GGGCAAGTAA ATGTGCTAGT AGGATCATCT 241 TGTGGGTAGC TATACGCATC AGGACATCTT TGTTTGAAAA ATCTCGACAA ATCAGTAGGG 301 CCACATGGAC CTTGTGTGCA A Predicted gene structure (within gDNA segment 38570 to 41999): Exon 1 40919 41093 ( 175 n); cDNA 151 321 ( 171 n); score: 0.846 PPA cDNA 12 1 MATCH C08HBa0235H18.1+ SGN-E350856- 0.846 175 0.545 C PGS_C08HBa0235H18.1+_SGN-E350856- (40919 41093) Alignment (genomic DNA sequence = upper lines): AAATATGCTT TATTGTGGCA TCAATTATGG GCAAAAAACA ACCCTATAAT TTGTACTACC 40978 |||| || || || || | |||| || ||||||||| |||||||||| |||||||||| AAATTTGGGC TA--GTAACA -CCATTA-GG ACAAAAAACA ACCCTATAAT TTGTACTACC 206 ACTAGGGCAA GTGAATAAGC TAGTAGGATC ATCTTGAGGG TAGCTATACG CATTAGGGCA 41038 |||||||||| || ||| || |||||||||| |||||| ||| |||||||||| ||| ||| || ACTAGGGCAA GTAAATGTGC TAGTAGGATC ATCTTGTGGG TAGCTATACG CATCAGGACA 266 CCTTTGTTTG AAAAATCTCG AAAATTTTGT AGGACCACAT GGGCCTTGAG TACAA 41093 ||||||||| |||||||||| | || | || ||| |||||| || ||||| | | ||| TCTTTGTTTG AAAAATCTCG ACAAATCAGT AGGGCCACAT GGACCTTGTG TGCAA 321 hqPGS_C08HBa0235H18.1+_SGN-E350856- (40919 41093) ******************************************************************************** EST sequence 623 -strand 683 n (File: SGN-E212433-) 1 ATCAGCAACA CCATTAGGAC AAAAGACANC CCTATAGTTT GTACTACCAC CAGGGCAAGT 61 AAATGTGCTT GTAGGATCGT CTTGTGGGTA GCTATAAGCA TCGGGACATC TTTTCTTGAA 121 AAATTTGGAC AACTCTGTAG GGCCACATGG ACCTTGGGTG CAACAATATT GTTGTCCTCC 181 AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC 241 ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 301 AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 361 AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 421 TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 481 ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 541 TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA 601 TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA 661 GAAGAGAACA AAAGAAGATG TCA Predicted gene structure (within gDNA segment 38881 to 43176): Exon 1 40930 41613 ( 684 n); cDNA 1 683 ( 683 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E212433- 0.864 684 1.001 C PGS_C08HBa0235H18.1+_SGN-E212433- (40930 41613) Alignment (genomic DNA sequence = upper lines): ATTGTGGCAT CAATTATGGG CAAAAAACAA CCCTATAATT TGTACTACCA CTAGGGCAAG 40989 || | |||| || ||||| ||| ||||||| || |||||||||| | |||||||| ATCAGCAACA CCATTA-GGA CAAAAGACAN CCCTATAGTT TGTACTACCA CCAGGGCAAG 59 TGAATAAGCT AGTAGGATCA TCTTGAGGGT AGCTATACGC ATTAGGGCAC CTTTGTTTGA 41049 | ||| ||| |||||||| ||||| |||| ||||||| || || || || |||| |||| TAAATGTGCT TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA 119 AAAATCTCGA AAATTTTGTA GGACCACATG GGCCTTGAGT ACAACAATAT TGTTGTCCTC 41109 ||||| | || || | |||| || ||||||| | ||||| || ||||||||| |||||||||| AAAATTTGGA CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC 179 CGAACGTGGT ACAAGGGTTG TTACATCCTC CGGGTACCCT AAGTGGACTA GGGCATTCAC 41169 | |||||||| |||||||||| |||||||||| | |||||| | ||| | | | || ||||||| CAAACGTGGT ACAAGGGTTG TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC 239 CGTTTATATT AGCCGTGCAA TGAATTGCAT GGCATTTTCC TCCACTAGGA TTGGTTGGGG 41229 | |||||||| ||||||||| |||||||| | | |||||||| ||||||||| || ||||||| CATTTATATT GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG 299 CGAAAGTCAT CGGTATATTA AATCCGTCAA CCAAAGAAAT GTCCCAGAAA TCTAGGTTGC 41289 | |||||||| || |||||| ||||| || | | |||||||| |||||| ||| |||| ||||| CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC 359 TGAATTGGTC CAAAGCATAT TCAGCTAGGG TGTTTGGGGG TTTGCCCCAC CCGGTACAGT 41349 | || ||||| ||| || || || ||||||| |||||||||| ||||||||| |||||||| | TAAACTGGTC CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT 419 GTAGGACCCC ACCACAATCA CCAGTTTGGC ATGAACCTCT ACCAGCACCA TTAAAATTGC 41409 ||| ||| || |||||||||| ||||| || | ||| |||||| || ||| || ||||| |||| GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC 479 AATTAGTACG ACCCCATATA CGTGCCATCT TAGTGCCCCT CGGCGCATTG ATGACCCATG 41469 || |||||| |||||||||| |||||||||| |||| ||||| ||| |||||| |||||||||| AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG 539 TTTGGCCTCG ATCGAGACGT CGACCACCGC CTATCGGGGT CGATGCTGCC CAAACGGTGT 41529 |||||||||| || ||||||| |||||||||| ||||||| || |||||| ||| |||||||||| TTTGGCCTCG ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT 599 AGGGACAATT GTTGCGTACC TCGATAGTGG CAGCATAAGT GTAAGTCACT AAAGCAAGGA 41589 | ||||| || |||||||||| || ||||||| |||||||||| |||||||| || ||||| ATGGACAGTT GTTGCGTACC TCAATAGTGG CAGCATAAGT ATAAGTCACA CAAAGAAGGA 659 AGAAGAAAAT AAAAGAAGAT GTCA 41613 |||||| || |||||||||| |||| AGAAGAGAAC AAAAGAAGAT GTCA 683 hqPGS_C08HBa0235H18.1+_SGN-E212433- (40930 41613) ******************************************************************************** EST sequence 654 -strand 654 n (File: SGN-E212616-) 1 AGCTATTAAG ATTTTCATTA CGGGTAGAGA TCAGTTGACT AATTGAGGCG ATTTAAAATG 61 AAGAAACTCA AATTCACTTG GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT 121 TGGATCAGCA ACACCATTAG GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA 181 AGTAAATGTG CTTGTAGGAT CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT 241 GAAAAATTTG GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC 301 TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC 361 ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG 421 GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT 481 GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG GGTTTGCCCC ATCCGGTACA 541 CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT CTGCCTGCAG CATTAAAGTT 601 GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC CTCGGAGCAT TGAT Predicted gene structure (within gDNA segment 37051 to 42223): Exon 1 38178 38195 ( 18 n); cDNA 111 128 ( 18 n); score: 0.722 Intron 1 38196 40933 (2738 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.80) Exon 2 40934 41461 ( 528 n); cDNA 129 654 ( 526 n); score: 0.858 MATCH C08HBa0235H18.1+ SGN-E212616- 0.858 546 0.835 C PGS_C08HBa0235H18.1+_SGN-E212616- (38178 38195,40934 41461) Alignment (genomic DNA sequence = upper lines): AAGGGGATGT TGGACTGGGT TGAAGAGGAT GGGCGTCTGG GGGGAATTGG GCCTTGAGTC 38237 ||||||| | |||| | AAGGGGAAAT TGGATCAG.. .......... .......... .......... .......... 128 TGTGGGCTGT TGGGAATATT GGGTGTAAGG AATTTAGGCA AAATGGGTTG AGGACGAAAG 38297 .......... .......... .......... .......... .......... .......... 128 TGGGCCTCGG AATAAGAGTG GGCTGATGGG TAAAGGAATG GGTTCAAGAT ATACATATAT 38357 .......... .......... .......... .......... .......... .......... 128 ACATATACAT ATATGTATAT ACATATATGT ATATATGTAC ATATATTTAT TTTCGCAAGG 38417 .......... .......... .......... .......... .......... .......... 128 TTTATAAAAC TAACTAACTC ATACCGACGC GGGTCAAAAT TGGGTGTCAA CAACATTTTT 38477 .......... .......... .......... .......... .......... .......... 128 AAAGAGTTGT GACTTTTATG AAAAATTGTG ACTTTAATAA AGAGTCGCGA TTTTTATAAA 38537 .......... .......... .......... .......... .......... .......... 128 GGTTGTGACC TTTCTAAAGG AATGCAACTT TTTTAAATAG TTGTAAACTT TTTGATAACA 38597 .......... .......... .......... .......... .......... .......... 128 CACAAAATAC ATTTGTTCAC ACTTCTTTGT TGTCTATAAA TAGAGGGATT TTCTTTTATT 38657 .......... .......... .......... .......... .......... .......... 128 TTAAAACAAC AAAAATTCTT AAACCTCCTC CTCTTCTTCT TCTTTTTGCA CAATTAAATA 38717 .......... .......... .......... .......... .......... .......... 128 GTTATGTATT TTGCTCATGT TGAGTGACTC ACTGAAACTA TTTCTTATGT AACAGATCCT 38777 .......... .......... .......... .......... .......... .......... 128 AGTATGTAAT TTTATAGTCA CTAATTTATG CTTATGTTAT TAAGGATAAA TGATAAGATT 38837 .......... .......... .......... .......... .......... .......... 128 TGATAATTTT CATTTTCCTT TACATTATTA ATATTTGTTA TTACATAATC TTGTATGTAA 38897 .......... .......... .......... .......... .......... .......... 128 GATAATATAT ATAGTGTTTT AGTTTTAATG ATCGATAGAT TTTTAGTATT ATTTTATAAA 38957 .......... .......... .......... .......... .......... .......... 128 TTAATGAAAT ACACGTCTTA TTTTTCCCTT ATTTTCAATA TTCCCTTTTA TTTCTAAAAA 39017 .......... .......... .......... .......... .......... .......... 128 CCTCTAAAAT TCCTTATTTA TTTAATGTAA CTGAGTTACA TATTAATGTA TCTAAATCAA 39077 .......... .......... .......... .......... .......... .......... 128 TATTTAATAT ATTTGAGCTG CATATTATGT ATTCGGTTTA TTTTATAATG TATCTGAGCT 39137 .......... .......... .......... .......... .......... .......... 128 AGTTCTTAAT GTATTCGCGC TGCATATTAA TGCATCCAAA AACTAGTATG TAATGTATCC 39197 .......... .......... .......... .......... .......... .......... 128 AAGCTACATA TTATGTATCC TATTTATGTT ATGATGTACC CGAGCTACAT GTTATGTATC 39257 .......... .......... .......... .......... .......... .......... 128 CGAGCTACAT GTTATGTATC CGATTTATGT TATAATGTAT CCGAGATACT CTTTAATGTA 39317 .......... .......... .......... .......... .......... .......... 128 TCTGAGCTAC ATATTAATGT ATCCGATTTG TGTTACTTTT AAGAGATTAA TGTAATTACA 39377 .......... .......... .......... .......... .......... .......... 128 AACTAAAGAG GGATAGATTG TAACTTCACA TTAAAACTCT GTGATTTCTA AAATTTATCC 39437 .......... .......... .......... .......... .......... .......... 128 AAAATCTGTA ATATTAAATG CACGAATAGT TTTACTAGTA TATATATAGC ATATCAAACT 39497 .......... .......... .......... .......... .......... .......... 128 ATGTTTTCAC TTTAAGTTGA AAGGGTTTGT GTATATATAT TCCACACGCA TATATACAAA 39557 .......... .......... .......... .......... .......... .......... 128 CTTATTATCA ATATTATTTT GGTAATTTTT CATTCATTTT TTTCGCAACC AAAATATTCT 39617 .......... .......... .......... .......... .......... .......... 128 TTTTATGGGC AAAAAACTAC TTTATAATTA GTTCCTCCAA GACAAGTAAA ATATTAGTTT 39677 .......... .......... .......... .......... .......... .......... 128 TAGCATCCTT AGGGTAAGCA TCATAACACC TTTCCTTAAA AACACTTACA CTGTTGGATC 39737 .......... .......... .......... .......... .......... .......... 128 ACATTTACCG GAATAACAAC AATATTGATC GGTCTTAAAA ATCGTACAAG GATTGTTATA 39797 .......... .......... .......... .......... .......... .......... 128 ACATCCTCTG CGAGTTTTTA GCACTCATGG ACAAATCATG TTAATATCAA CTCTACACCT 39857 .......... .......... .......... .......... .......... .......... 128 AGTGCCACGA GCACGCCCAT TCGATATAGG GCTAAATTCT ATTGACACGT TGAATCTAGC 39917 .......... .......... .......... .......... .......... .......... 128 GATGAAATAG ACATTCAAAA AATTAAAAAA ATATATCATC TTAAAACTTC CACTACATAA 39977 .......... .......... .......... .......... .......... .......... 128 ATTGTGAAAA TTTGTAACTC TTTCAATACA GAATTAAATG GATGGAATGA TTACAAGGAA 40037 .......... .......... .......... .......... .......... .......... 128 AATTTCTATA AGGGAGAAAT TTAATAGGTA GCCACTTATA TATTTGATAA GTGTAAGACA 40097 .......... .......... .......... .......... .......... .......... 128 TCATATTGAA GGAGCAATAG AGAAAATTCA TCACATGAAA TCATGATATT AATTATGGCT 40157 .......... .......... .......... .......... .......... .......... 128 ATATTATATT ACATACTGTC ATTTAATCTA AATTACCAAA CTGCAATGAT GATTACTTCT 40217 .......... .......... .......... .......... .......... .......... 128 TTAATTTCTG GAGATTCAAA GTTAATTAAA AAAACTCTGC TAATGAAATT AAGAAAACAG 40277 .......... .......... .......... .......... .......... .......... 128 GACTGTTGGT TCATTGGTTA AGTTTGACTA TCGATTTAGC GTGTTATAAA TAAAAAATAC 40337 .......... .......... .......... .......... .......... .......... 128 ACAAAAACCT AACTGAACCA ATCAATAACC ACATGGACAA TATCCAATAC GAGTTATGAA 40397 .......... .......... .......... .......... .......... .......... 128 CCTGCCAATT TATTAGCACT AGGCATGTTC AGGGATGGTC GACAGTGTTA AAAAAAGACA 40457 .......... .......... .......... .......... .......... .......... 128 TGTGTCATAG GCCTTCAAAT TTAAATTATA ACAGTCGTAA ATTATTATTT TTTAAAAAAA 40517 .......... .......... .......... .......... .......... .......... 128 GTTTAACATT TCATGAAAAA TGAAGAAATC ATTAGAAGAA TTTTGACATA TTTGGAATAC 40577 .......... .......... .......... .......... .......... .......... 128 TATATCTCAT GAAAAATAAT TAAAAATAAG AAATGATTAT ACTATCACAT GAAAACTAGA 40637 .......... .......... .......... .......... .......... .......... 128 CGAAATCAAT TATATAAAAA TTATTAACAA TTTAAGTTTA AAACCCCATT TAATTTTTAC 40697 .......... .......... .......... .......... .......... .......... 128 TTTAGAACGT AATACGCTTG AGCCGCCCCC TCGATTTAAC CAGGACGTAA AAGTACTAAC 40757 .......... .......... .......... .......... .......... .......... 128 GATATTATTG TTTATTCATT ATGATAAAAC TATATTCAGT TGAAGGGAGA CATACATAAC 40817 .......... .......... .......... .......... .......... .......... 128 ACACGTTGGA GATTATTATC ACATTAAGGC AACATAGTTT AGCAGACCGT TTAAGATGCT 40877 .......... .......... .......... .......... .......... .......... 128 TATTATTTTG GTAATTTTTT CATACCATTC AATTTGTAGC AAAATATGCT TTATTGTGGC 40937 | .......... .......... .......... .......... .......... ......CAAC 132 ATCAATTATG GGCAAAAAAC AACCCTATAA TTTGTACTAC CACTAGGGCA AGTGAATAAG 40997 | | |||| | | ||||| || ||||||||| |||||||||| ||| |||||| ||| ||| | A-CCATTA-G GACAAAAGAC AACCCTATAG TTTGTACTAC CACCAGGGCA AGTAAATGTG 190 CTAGTAGGAT CATCTTGAGG GTAGCTATAC GCATTAGGGC ACCTTTGTTT GAAAAATCTC 41057 || ||||||| | ||||| || ||||||||| |||| || | | |||| || ||||||| | CTTGTAGGAT CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG 250 GAAAATTTTG TAGGACCACA TGGGCCTTGA GTACAACAAT ATTGTTGTCC TCCGAACGTG 41117 || || | || |||| ||||| ||| ||||| || ||||||| |||||||||| ||| |||||| GACAACTCTG TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG 310 GTACAAGGGT TGTTACATCC TCCGGGTACC CTAAGTGGAC TAGGGCATTC ACCGTTTATA 41177 |||||||||| |||||||||| ||| |||||| |||| | | ||| ||||| ||| |||||| GTACAAGGGT TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC ACCATTTATA 370 TTAGCCGTGC AATGAATTGC ATGGCATTTT CCTCCACTAG GATTGGTTGG GGCGAAAGTC 41237 || ||||||| |||||||||| || |||||| |||||||||| | || ||||| ||| |||||| TTGGCCGTGC AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC 430 ATCGGTATAT TAAATCCGTC AACCAAAGAA ATGTCCCAGA AATCTAGGTT GCTGAATTGG 41297 || || |||| ||||||| || || |||||| |||||||| | |||||| ||| ||| || ||| ATTGGAATAT TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG 490 TCCAAAGCAT ATTCAGCTAG GGTGTTTGGG GGTTTGCCCC ACCCGGTACA GTGTAGGACC 41357 ||||| || | | || ||||| |||||||||| |||||||||| | |||||||| |||| ||| TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT 550 CCACCACAAT CACCAGTTTG GCATGAACCT CTACCAGCAC CATTAAAATT GCAATTAGTA 41417 |||||||||| ||||||| || |||| |||| || || ||| ||||||| || |||| |||| CCACCACAAT CACCAGTCTG ACATGTACCT CTGCCTGCAG CATTAAAGTT GCAACCAGTA 610 CGACCCCATA TACGTGCCAT CTTAGTGCCC CTCGGCGCAT TGAT 41461 |||||||||| |||||||||| |||||| ||| ||||| |||| |||| CGACCCCATA TACGTGCCAT CTTAGTTCCC CTCGGAGCAT TGAT 654 hqPGS_C08HBa0235H18.1+_SGN-E212616- (40934 41461) ******************************************************************************** EST sequence 500 -strand 709 n (File: SGN-E350897-) 1 TTAAAAAACT GAGCTATAAA GATTTTCATT ACGGTAGAGA TCAGTTGACT AATGAGGCGA 61 TTAAAATGAG AACTNNCAAT TTCACTTGGC CACTTCATCA GTACTTGCAG GCATCTCAAG 121 GGGAATTNGG GATCAGCACA CCCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA 181 CCAGGGGCAA GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA 241 TCTTTTCTTG AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA 301 TTGTTGTCCT CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG 361 AGGACATTCA CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG 421 TTTTGTTGGG GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA 481 ATCTAAGTTG CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA 541 TCCGGTACAC TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC 601 ATTAAAGTTG CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC TCGGAGCATT 661 GATGACCCAT GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGA Predicted gene structure (within gDNA segment 37561 to 42116): Exon 1 40937 41506 ( 570 n); cDNA 139 708 ( 570 n); score: 0.868 MATCH C08HBa0235H18.1+ SGN-E350897- 0.868 570 0.804 C PGS_C08HBa0235H18.1+_SGN-E350897- (40937 41506) Alignment (genomic DNA sequence = upper lines): CATCAATTAT GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTA-GGG CAAGTGAATA 40995 || | |||| || ||||| | |||||||||| ||||||||| |||| | ||| ||||| ||| CACCCATTA- GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGGGG CAAGTAAATG 197 AGCTAGTAGG ATCATCTTGA GGGTAGCTAT ACGCATTAGG GCACCTTTGT TTGAAAAATC 41055 ||| ||||| ||| ||||| |||||||||| | |||| || || |||| ||||||||| TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC TTGAAAAATT 257 TCGAAAATTT TGTAGGACCA CATGGGCCTT GAGTACAACA ATATTGTTGT CCTCCGAACG 41115 | || || | |||||| ||| ||||| |||| | || ||||| |||||||||| ||||| |||| TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT CCTCCAAACG 317 TGGTACAAGG GTTGTTACAT CCTCCGGGTA CCCTAAGTGG ACTAGGGCAT TCACCGTTTA 41175 |||||||||| |||||||||| ||||| |||| || |||| | | ||| ||| ||||| |||| TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA 377 TATTAGCCGT GCAATGAATT GCATGGCATT TTCCTCCACT AGGATTGGTT GGGGCGAAAG 41235 |||| ||||| |||||||||| || || |||| |||||||||| ||| || ||| ||||| |||| TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT GGGGCAAAAG 437 TCATCGGTAT ATTAAATCCG TCAACCAAAG AAATGTCCCA GAAATCTAGG TTGCTGAATT 41295 |||| || || ||||||||| || || |||| |||||||||| ||||||| | ||||| || | TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT 497 GGTCCAAAGC ATATTCAGCT AGGGTGTTTG GGGGTTTGCC CCACCCGGTA CAGTGTAGGA 41355 ||||||| || || || ||| |||||||||| |||||||||| ||| |||||| || |||| || GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA 557 CCCCACCACA ATCACCAGTT TGGCATGAAC CTCTACCAGC ACCATTAAAA TTGCAATTAG 41415 | |||||||| ||||||||| || |||| || |||| || || | ||||||| |||||| || CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG TTGCAACCAG 617 TACGACCCCA TATACGTGCC ATCTTAGTGC CCCTCGGCGC ATTGATGACC CATGTTTGGC 41475 |||||||||| |||||||||| |||||||| | ||||||| || |||||||||| |||||||||| TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC CATGTTTGGC 677 CTCGATCGAG ACGTCGACCA CCGCCTATCG G 41506 |||||| ||| |||||||||| |||||||||| | CTCGATTGAG ACGTCGACCA CCGCCTATCG G 708 hqPGS_C08HBa0235H18.1+_SGN-E350897- (40937 41506) ******************************************************************************** EST sequence 601 -strand 716 n (File: SGN-E212860-) 1 AAAAATTACC AAAAAAAGAG ATGGGCTCAA CTCAAGATTT CTACTTAATT AAGCCACTCA 61 AAGAGTATTT GTAGGAATCT CCAATGGGAA ATTTGTTGTT TCATTGTGAG TAGAGCCATA 121 AGGACAAAAC ATAACCTNGT AGTCTGTAGT CCAACTCTGA CAAGTAAAAG TACTTGTTGG 181 ATCGTCTTGA GGATAACTAT AGGCATCGGG ACATCTTTGT TTGAAAAATC TTGACAAATC 241 GGTAGGACCA CATGGACCTT GAGTGCAACA ATATTGTTGT CCTCCGAATG TAGTACAAGG 301 GTTGTTACAT CCTCCGGGTA CCCTAAGTGA ACCAGGGCAT TCACCGTTTA TATTAGCAAC 361 ACATTGAATT GGATGACATT TTCCCGGCCC AGGGTTAGTT GGGCCGAAAG ACATAGGGAT 421 GTTGAATCCA TCAATAACAG AAATGTCCCA GAAATCTAAG TTGCTAAATT GATTCAAAGC 481 GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG CATTCCAAGA CTCCACCACA 541 ATCACCGGTC TGGCACCAAC CTCTACCAGC ACCATCAAAA TTGCAATTAG TACGACCCCA 601 AATACGTGCC ATTTTGGTGC CCGGTGGAGC CCAAAACCAC CAACTTTGAC CTCTCTCGAG 661 ACGTCGGCCA CCTCCTACGG GAGTCGCCGC TGCCCATACG GTGTATGGAC AGTTGT Predicted gene structure (within gDNA segment 37588 to 43185): Exon 1 40944 41541 ( 598 n); cDNA 119 716 ( 598 n); score: 0.804 MATCH C08HBa0235H18.1+ SGN-E212860- 0.804 598 0.835 C PGS_C08HBa0235H18.1+_SGN-E212860- (40944 41541) Alignment (genomic DNA sequence = upper lines): TATGGGCAAA AAACAACCCT ATAATTTGTA CTACCACTAG GGCAAGTGAA TAAGCTAGTA 41003 || || |||| | | |||| || | |||| | | ||| | ||||| || || || TAAGGACAAA ACATAACCTN GTAGTCTGTA GTCCAACTCT GACAAGTAAA AGTACTTGTT 178 GGATCATCTT GAGGGTAGCT ATACGCATTA GGGCACCTTT GTTTGAAAAA TCTCGAAAAT 41063 ||||| |||| |||| || || ||| |||| || || |||| |||||||||| ||| || || GGATCGTCTT GAGGATAACT ATAGGCATCG GGACATCTTT GTTTGAAAAA TCTTGACAAA 238 TTTGTAGGAC CACATGGGCC TTGAGTACAA CAATATTGTT GTCCTCCGAA CGTGGTACAA 41123 | ||||||| ||||||| || |||||| ||| |||||||||| |||||||||| || |||||| TCGGTAGGAC CACATGGACC TTGAGTGCAA CAATATTGTT GTCCTCCGAA TGTAGTACAA 298 GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GGACTAGGGC ATTCACCGTT TATATTAGCC 41183 |||||||||| |||||||||| |||||||||| | || ||||| |||||||||| ||||||||| GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GAACCAGGGC ATTCACCGTT TATATTAGCA 358 GTGCAATGAA TTGCATGGCA TTTTCCTCCA CTAGGATTGG TTGGGGCGAA AGTCATCGGT 41243 || |||| ||| ||| || |||||| | ||| || | ||||| |||| || ||| || ACACATTGAA TTGGATGACA TTTTCCCGGC CCAGGGTTAG TTGGGCCGAA AGACATAGGG 418 ATATTAAATC CGTCAACCAA AGAAATGTCC CAGAAATCTA GGTTGCTGAA TTGGTCCAAA 41303 || || |||| | |||| | |||||||||| |||||||||| |||||| || ||| | |||| ATGTTGAATC CATCAATAAC AGAAATGTCC CAGAAATCTA AGTTGCTAAA TTGATTCAAA 478 GCATATTCAG CTAGGGTGTT TGGGGGTTTG CCCCACCCGG TACAGTGTAG GACCCCACCA 41363 || ||||||| ||| |||||| ||| ||||| ||||| || | || | | ||| |||||| GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT TGCATTCCAA GACTCCACCA 538 CAATCACCAG TTTGGCATGA ACCTCTACCA GCACCATTAA AATTGCAATT AGTACGACCC 41423 |||||||| | | ||||| | |||||||||| ||||||| || |||||||||| |||||||||| CAATCACCGG TCTGGCACCA ACCTCTACCA GCACCATCAA AATTGCAATT AGTACGACCC 598 CATATACGTG CCATCTTAGT GCCCCTCGGC GCATTGATGA CCCATGTTTG GCCTCGATCG 41483 || ||||||| |||| || || |||| || || | ||| |||| |||| ||| CAAATACGTG CCATTTTGGT GCCCGGTGGA GCCCAAAACC ACCAACTTTG ACCTCTCTCG 658 AGACGTCGAC CACCGCCTAT CGGGGTCGAT GCTGCCCAAA CGGTGTAGGG ACAATTGT 41541 |||||||| | |||| |||| || |||| |||||||| | ||||||| || ||| |||| AGACGTCGGC CACCTCCTAC GGGAGTCGCC GCTGCCCATA CGGTGTATGG ACAGTTGT 716 hqPGS_C08HBa0235H18.1+_SGN-E212860- (40944 41541) ******************************************************************************** EST sequence 329 +strand 773 n (File: SGN-E548946+) 1 TTTTTTTTTT CCGATATAAT TTCAATTTAA AATTAAAATA CCATATATAA GACAAAGCAT 61 CGATCATAGA TTGTTATTCA GATCTTAGCC ACTTCAAACA AACAAATGTA AAAGAAATGT 121 GTACAAGGCA AATTAAAGAC AATGTCCATC TTCAAAACAA ATTTAACAAA AAAGAGATTG 181 GCTCAACTCA AGATTTCTAC TTAATTAAGC CACTTCAAGA GTATTTGTAG GAATCTCCAA 241 TGGGAAATTT GTTGTTTCAT TGTGAGTAGA GCCATAAGGA CAAAACATAA CCTTGTAGTC 301 TGTAGTCCAA CTCTGACAAG TAAAAGTACT TGTTGGATCG TCTTGAGGAT AACTATAGGC 361 ATCGGGACAT CTTTGTTTGA AAAATCTTGA CAAATCGGTA GGACCACATG GACCTTGAGT 421 GCAACAATAT TGTTGTCCTC CGAATGTAGT ACAAGGGTTG TTACATCCTC CGGGTACCCT 481 AAGTGAACCA GGGCATTCAC CGTTTATATT AGCAACACAT TGAATTGGAT GACATTTTCC 541 CGGCCCAGGG TTAGTTGGGC CGAAAGACAT AGGGATGTTG AATCCATCAA TAACAGAAAT 601 GTCCCAGAAA TCTAAGTTGC TAAATTGATT CAAAGCGTAT TCAGCTAAGG TGTTTGGTGG 661 TTTACCCCAT CCTTTGCATT CCAAGACTCC ACCACAATCA CCGGTCTGGC ACCAACCTCT 721 ACCAGCACCA TCAAAATTGC AATTAGTACG ACCCCAAATA CGTGCCATTT TTG Predicted gene structure (within gDNA segment 38602 to 44742): Exon 1 40944 41440 ( 497 n); cDNA 275 771 ( 497 n); score: 0.823 PPA cDNA 10 1 MATCH C08HBa0235H18.1+ SGN-E548946+ 0.823 497 0.643 C PGS_C08HBa0235H18.1+_SGN-E548946+ (40944 41440) Alignment (genomic DNA sequence = upper lines): TATGGGCAAA AAACAACCCT ATAATTTGTA CTACCACTAG GGCAAGTGAA TAAGCTAGTA 41003 || || |||| | | |||| | || | |||| | | ||| | ||||| || || || TAAGGACAAA ACATAACCTT GTAGTCTGTA GTCCAACTCT GACAAGTAAA AGTACTTGTT 334 GGATCATCTT GAGGGTAGCT ATACGCATTA GGGCACCTTT GTTTGAAAAA TCTCGAAAAT 41063 ||||| |||| |||| || || ||| |||| || || |||| |||||||||| ||| || || GGATCGTCTT GAGGATAACT ATAGGCATCG GGACATCTTT GTTTGAAAAA TCTTGACAAA 394 TTTGTAGGAC CACATGGGCC TTGAGTACAA CAATATTGTT GTCCTCCGAA CGTGGTACAA 41123 | ||||||| ||||||| || |||||| ||| |||||||||| |||||||||| || |||||| TCGGTAGGAC CACATGGACC TTGAGTGCAA CAATATTGTT GTCCTCCGAA TGTAGTACAA 454 GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GGACTAGGGC ATTCACCGTT TATATTAGCC 41183 |||||||||| |||||||||| |||||||||| | || ||||| |||||||||| ||||||||| GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GAACCAGGGC ATTCACCGTT TATATTAGCA 514 GTGCAATGAA TTGCATGGCA TTTTCCTCCA CTAGGATTGG TTGGGGCGAA AGTCATCGGT 41243 || |||| ||| ||| || |||||| | ||| || | ||||| |||| || ||| || ACACATTGAA TTGGATGACA TTTTCCCGGC CCAGGGTTAG TTGGGCCGAA AGACATAGGG 574 ATATTAAATC CGTCAACCAA AGAAATGTCC CAGAAATCTA GGTTGCTGAA TTGGTCCAAA 41303 || || |||| | |||| | |||||||||| |||||||||| |||||| || ||| | |||| ATGTTGAATC CATCAATAAC AGAAATGTCC CAGAAATCTA AGTTGCTAAA TTGATTCAAA 634 GCATATTCAG CTAGGGTGTT TGGGGGTTTG CCCCACCCGG TACAGTGTAG GACCCCACCA 41363 || ||||||| ||| |||||| ||| ||||| ||||| || | || | | ||| |||||| GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT TGCATTCCAA GACTCCACCA 694 CAATCACCAG TTTGGCATGA ACCTCTACCA GCACCATTAA AATTGCAATT AGTACGACCC 41423 |||||||| | | ||||| | |||||||||| ||||||| || |||||||||| |||||||||| CAATCACCGG TCTGGCACCA ACCTCTACCA GCACCATCAA AATTGCAATT AGTACGACCC 754 CATATACGTG CCATCTT 41440 || ||||||| |||| || CAAATACGTG CCATTTT 771 hqPGS_C08HBa0235H18.1+_SGN-E548946+ (40944 41440) ******************************************************************************** EST sequence 663 -strand 710 n (File: SGN-E373166-) 1 TTTTTTTTTT TTTTTTTCAA TTTAAAAATT AAAATCCCAT ATATAAGACA AAGCATCGAT 61 CATAGATTGT TATTCAGATC TTAGCCACTT CAAACAAACA AATGTAAAAG AAATGTGTAC 121 AAGGCAAATT AAAGACAATG TCCATCTTCA AAACAAATTT AACAAAAAAG AGATTGGCTC 181 AACTCAAGAT TTCTACTTAA TTAAGCCACT TCAAGAGTAT TTGTAGGAAT CTCCAATGGG 241 AAATTTGTTG TTTCATTGTG AGTAGAGCCA TAAGGACAAA ACATAACCTT GTAGTCTGTA 301 GTCCAACTCT GACAAGTAAA AGTACTTGTT GGATCGTCTT GAGGATAACT ATAGGCATCG 361 GGACATCTTT GTTTGAAAAA TCTTGACAAA TCGGTAGGAC CACATGGACC TTGAGTGCAA 421 CAATATTGTT GTCCTCCGAA TGTAGTACAA GGGTTGTTAC ATCCTCCGGG TACCCTAAGT 481 GAACCAGGGC ATTCACCGTT TATATTAGCA ACACATTGAA TTGGATGACA TTTTCCCGGC 541 CCAGGGTTAG TTGGGCCGAA AGACATAGGG ATGTTGAATC CATCAATAAC AGAAATGTCC 601 CAGAAATCTA AGTTGCTAAA TTGATTCAAA GCGTATTCAG CTAAGGTGTT TGGTGGTTTA 661 CCCCATCCTT TGCATTCCAA GACTCCACCA CAATCACCGG TCTGGCACCA Predicted gene structure (within gDNA segment 38632 to 46113): Exon 1 40944 41377 ( 434 n); cDNA 271 704 ( 434 n); score: 0.809 PPA cDNA 17 1 MATCH C08HBa0235H18.1+ SGN-E373166- 0.809 434 0.611 C PGS_C08HBa0235H18.1+_SGN-E373166- (40944 41377) Alignment (genomic DNA sequence = upper lines): TATGGGCAAA AAACAACCCT ATAATTTGTA CTACCACTAG GGCAAGTGAA TAAGCTAGTA 41003 || || |||| | | |||| | || | |||| | | ||| | ||||| || || || TAAGGACAAA ACATAACCTT GTAGTCTGTA GTCCAACTCT GACAAGTAAA AGTACTTGTT 330 GGATCATCTT GAGGGTAGCT ATACGCATTA GGGCACCTTT GTTTGAAAAA TCTCGAAAAT 41063 ||||| |||| |||| || || ||| |||| || || |||| |||||||||| ||| || || GGATCGTCTT GAGGATAACT ATAGGCATCG GGACATCTTT GTTTGAAAAA TCTTGACAAA 390 TTTGTAGGAC CACATGGGCC TTGAGTACAA CAATATTGTT GTCCTCCGAA CGTGGTACAA 41123 | ||||||| ||||||| || |||||| ||| |||||||||| |||||||||| || |||||| TCGGTAGGAC CACATGGACC TTGAGTGCAA CAATATTGTT GTCCTCCGAA TGTAGTACAA 450 GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GGACTAGGGC ATTCACCGTT TATATTAGCC 41183 |||||||||| |||||||||| |||||||||| | || ||||| |||||||||| ||||||||| GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GAACCAGGGC ATTCACCGTT TATATTAGCA 510 GTGCAATGAA TTGCATGGCA TTTTCCTCCA CTAGGATTGG TTGGGGCGAA AGTCATCGGT 41243 || |||| ||| ||| || |||||| | ||| || | ||||| |||| || ||| || ACACATTGAA TTGGATGACA TTTTCCCGGC CCAGGGTTAG TTGGGCCGAA AGACATAGGG 570 ATATTAAATC CGTCAACCAA AGAAATGTCC CAGAAATCTA GGTTGCTGAA TTGGTCCAAA 41303 || || |||| | |||| | |||||||||| |||||||||| |||||| || ||| | |||| ATGTTGAATC CATCAATAAC AGAAATGTCC CAGAAATCTA AGTTGCTAAA TTGATTCAAA 630 GCATATTCAG CTAGGGTGTT TGGGGGTTTG CCCCACCCGG TACAGTGTAG GACCCCACCA 41363 || ||||||| ||| |||||| ||| ||||| ||||| || | || | | ||| |||||| GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT TGCATTCCAA GACTCCACCA 690 CAATCACCAG TTTG 41377 |||||||| | | || CAATCACCGG TCTG 704 hqPGS_C08HBa0235H18.1+_SGN-E373166- (40944 41377) ******************************************************************************** EST sequence 754 -strand 547 n (File: SGN-E291342-) 1 AAAAAAGAGA TTGGCTCAAC TCAAGATTTC TACTTAATTA AGCCACTTCA AGAGTATTTG 61 TAGGAATCTC CAATGGGAAA TTTGTTGTTT CATTGTGAGT AGAGCCATAA GGACAAAACA 121 TAACCTTGTA GTCTGTAGTC CAACTCTGAC AAGTAAAAGT ACTTGTTGGA TCGTCTTGAG 181 GATAACTATA GGCATCGGGA CATCTTTGTT TGAAAAATCT TGACAAATCG GTAGGACCAC 241 ATGGACCTTG AGTGCAACAA TATTGTTGTC CTCCGAATGT AGTACAAGGG TTGTTACATC 301 CTCCGGGTAC CCTAAGTGAA CCAGGGCATT CACCGTTTAT ATTAGCAACA CATTGAATTG 361 GATGACATTT TCCCGGCCCA GGGTTAGTTG GGCCGAAAGA CATAGGGATG TTGAATCCAT 421 CAATAACAGA AATGTCCCAG AAATCTAAGT TGCTAAATTG ATTCAAAGCG TATTCAGCTA 481 AGGTGTTTGG TGGTTTACCC CATCCTTTGC ATTCCAAGAC TCCACCACAA TCACCGGTCT 541 GGCACCA Predicted gene structure (within gDNA segment 40262 to 46113): Exon 1 40944 41377 ( 434 n); cDNA 108 541 ( 434 n); score: 0.809 MATCH C08HBa0235H18.1+ SGN-E291342- 0.809 434 0.793 C PGS_C08HBa0235H18.1+_SGN-E291342- (40944 41377) Alignment (genomic DNA sequence = upper lines): TATGGGCAAA AAACAACCCT ATAATTTGTA CTACCACTAG GGCAAGTGAA TAAGCTAGTA 41003 || || |||| | | |||| | || | |||| | | ||| | ||||| || || || TAAGGACAAA ACATAACCTT GTAGTCTGTA GTCCAACTCT GACAAGTAAA AGTACTTGTT 167 GGATCATCTT GAGGGTAGCT ATACGCATTA GGGCACCTTT GTTTGAAAAA TCTCGAAAAT 41063 ||||| |||| |||| || || ||| |||| || || |||| |||||||||| ||| || || GGATCGTCTT GAGGATAACT ATAGGCATCG GGACATCTTT GTTTGAAAAA TCTTGACAAA 227 TTTGTAGGAC CACATGGGCC TTGAGTACAA CAATATTGTT GTCCTCCGAA CGTGGTACAA 41123 | ||||||| ||||||| || |||||| ||| |||||||||| |||||||||| || |||||| TCGGTAGGAC CACATGGACC TTGAGTGCAA CAATATTGTT GTCCTCCGAA TGTAGTACAA 287 GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GGACTAGGGC ATTCACCGTT TATATTAGCC 41183 |||||||||| |||||||||| |||||||||| | || ||||| |||||||||| ||||||||| GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GAACCAGGGC ATTCACCGTT TATATTAGCA 347 GTGCAATGAA TTGCATGGCA TTTTCCTCCA CTAGGATTGG TTGGGGCGAA AGTCATCGGT 41243 || |||| ||| ||| || |||||| | ||| || | ||||| |||| || ||| || ACACATTGAA TTGGATGACA TTTTCCCGGC CCAGGGTTAG TTGGGCCGAA AGACATAGGG 407 ATATTAAATC CGTCAACCAA AGAAATGTCC CAGAAATCTA GGTTGCTGAA TTGGTCCAAA 41303 || || |||| | |||| | |||||||||| |||||||||| |||||| || ||| | |||| ATGTTGAATC CATCAATAAC AGAAATGTCC CAGAAATCTA AGTTGCTAAA TTGATTCAAA 467 GCATATTCAG CTAGGGTGTT TGGGGGTTTG CCCCACCCGG TACAGTGTAG GACCCCACCA 41363 || ||||||| ||| |||||| ||| ||||| ||||| || | || | | ||| |||||| GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT TGCATTCCAA GACTCCACCA 527 CAATCACCAG TTTG 41377 |||||||| | | || CAATCACCGG TCTG 541 hqPGS_C08HBa0235H18.1+_SGN-E291342- (40944 41377) ******************************************************************************** EST sequence 1190 -strand 523 n (File: SGN-E292854-) 1 GATTTCTACT TAATTAAGCC ACTTCAAGAG TATTTGTAGG AATCTCCAAT GGGAAATTTG 61 TTGTTTCATT GTGAGTAGAG CCATAAGGAC AAAACATAAC CTTGTAGTCT GTAGTCCAAC 121 TCTGACAAGT AAAAGTACTT GTTGGATCGT CTTGAGGATA ACTATAGGCA TCGGGACATC 181 TTTGTTTGAA AAATCTTGAC AAATCGGTAG GACCACATGG ACCTTGAGTG CAACAATATT 241 GTTGTCCTCC GAATGTAGTA CAAGGGTTGT TACATCCTCC GGGTACCCTA AGTGAACCAG 301 GGCATTCACC GTTTATATTA GCAACACATT GAATTGGATG ACATTTTCCC GGCCCAGGGT 361 TAGTTGGGCC GAAAGACATA GGGATGTTGA ATCCATCAAT AACAGAAATG TCCCAGAAAT 421 CTAAGTTGCT AAATTGATTC AAAGCGTATT CAGCTAAGGT GTTTGGTGGT TTACCCCATC 481 CTTTGCATTC CAAGACTCCA CCACAATCAC CGGTCTGGCA CCA Predicted gene structure (within gDNA segment 39902 to 46113): Exon 1 40944 41377 ( 434 n); cDNA 84 517 ( 434 n); score: 0.809 MATCH C08HBa0235H18.1+ SGN-E292854- 0.809 434 0.830 C PGS_C08HBa0235H18.1+_SGN-E292854- (40944 41377) Alignment (genomic DNA sequence = upper lines): TATGGGCAAA AAACAACCCT ATAATTTGTA CTACCACTAG GGCAAGTGAA TAAGCTAGTA 41003 || || |||| | | |||| | || | |||| | | ||| | ||||| || || || TAAGGACAAA ACATAACCTT GTAGTCTGTA GTCCAACTCT GACAAGTAAA AGTACTTGTT 143 GGATCATCTT GAGGGTAGCT ATACGCATTA GGGCACCTTT GTTTGAAAAA TCTCGAAAAT 41063 ||||| |||| |||| || || ||| |||| || || |||| |||||||||| ||| || || GGATCGTCTT GAGGATAACT ATAGGCATCG GGACATCTTT GTTTGAAAAA TCTTGACAAA 203 TTTGTAGGAC CACATGGGCC TTGAGTACAA CAATATTGTT GTCCTCCGAA CGTGGTACAA 41123 | ||||||| ||||||| || |||||| ||| |||||||||| |||||||||| || |||||| TCGGTAGGAC CACATGGACC TTGAGTGCAA CAATATTGTT GTCCTCCGAA TGTAGTACAA 263 GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GGACTAGGGC ATTCACCGTT TATATTAGCC 41183 |||||||||| |||||||||| |||||||||| | || ||||| |||||||||| ||||||||| GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GAACCAGGGC ATTCACCGTT TATATTAGCA 323 GTGCAATGAA TTGCATGGCA TTTTCCTCCA CTAGGATTGG TTGGGGCGAA AGTCATCGGT 41243 || |||| ||| ||| || |||||| | ||| || | ||||| |||| || ||| || ACACATTGAA TTGGATGACA TTTTCCCGGC CCAGGGTTAG TTGGGCCGAA AGACATAGGG 383 ATATTAAATC CGTCAACCAA AGAAATGTCC CAGAAATCTA GGTTGCTGAA TTGGTCCAAA 41303 || || |||| | |||| | |||||||||| |||||||||| |||||| || ||| | |||| ATGTTGAATC CATCAATAAC AGAAATGTCC CAGAAATCTA AGTTGCTAAA TTGATTCAAA 443 GCATATTCAG CTAGGGTGTT TGGGGGTTTG CCCCACCCGG TACAGTGTAG GACCCCACCA 41363 || ||||||| ||| |||||| ||| ||||| ||||| || | || | | ||| |||||| GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT TGCATTCCAA GACTCCACCA 503 CAATCACCAG TTTG 41377 |||||||| | | || CAATCACCGG TCTG 517 hqPGS_C08HBa0235H18.1+_SGN-E292854- (40944 41377) ******************************************************************************** EST sequence 148 +strand 734 n (File: SGN-E373165+) 1 CCTCGAGAGA ACTAGTCACG AGTTTTTTTT TTTTTTTTTT TCAATTTAAA ATTAAAATAC 61 CATATATAAG ACAAAGCATC GATCATAGAT TGTTATTCAA ATCTTAGCCA CTTCAAACAA 121 ACAAATGTAA AAAAAATGTG TACAAGGCAA ATTAAAGACA ATGTCCATCT TCAAAACAAA 181 TTTAACAAAA AAGAGATTGG CTCAACTCAA GATTTCTACT TAATTAAGCC ACTTCAAGAG 241 TATTTGTAGG AATCTCCAAT GGGAAATTTG TTGTTTCATT GTGAGTAGAG CCATAAGGAC 301 AAAACATAAC CTTGTAGTCT GTAGTCCAAC TCTGACAAGT AAAAGTACTT GTTGGATCGT 361 CTTGAGGATA ACTATAGGCA TCGGGACATC TTTGTTTGAA AAATCTTGAC AAATCGGTAG 421 GACCACATGG ACCTTGAGTG CAACAATATT GTTGTCCTCC GAATGTAGTA CAAGGGTTGT 481 TACATCCTCC GGGTACCCTA AGTGAACCAG GGCATTCACC GTTTATATTA GCAACACATT 541 GAATTGGATG ACATTTTCCC GGCCCAGGGT TAGTTGGGCC GAAAGACATA GGGATGTTGA 601 ATCCATCAAT AACAGAAATG TCCCAGAAAT CTAAGTTGCT AAATTGATTC AAAGCGTATT 661 CAGCTAAGGT GTTTGGTGGT TTACCCCATC CTTTGCATTC CAAGACTCCA CCACAATCAC 721 CGGTCTGGCA CCAA Predicted gene structure (within gDNA segment 38412 to 46133): Exon 1 40944 41377 ( 434 n); cDNA 294 727 ( 434 n); score: 0.809 Intron 1 41378 42038 ( 661 n); Pd: 0.897 (s: 0.76), Pa: 0.869 (s: 0) Exon 2 42039 42045 ( 7 n); cDNA 728 734 ( 7 n); score: 0.714 PPA cDNA 41 22 MATCH C08HBa0235H18.1+ SGN-E373165+ 0.809 441 0.601 C PGS_C08HBa0235H18.1+_SGN-E373165+ (40944 41377,42039 42045) Alignment (genomic DNA sequence = upper lines): TATGGGCAAA AAACAACCCT ATAATTTGTA CTACCACTAG GGCAAGTGAA TAAGCTAGTA 41003 || || |||| | | |||| | || | |||| | | ||| | ||||| || || || TAAGGACAAA ACATAACCTT GTAGTCTGTA GTCCAACTCT GACAAGTAAA AGTACTTGTT 353 GGATCATCTT GAGGGTAGCT ATACGCATTA GGGCACCTTT GTTTGAAAAA TCTCGAAAAT 41063 ||||| |||| |||| || || ||| |||| || || |||| |||||||||| ||| || || GGATCGTCTT GAGGATAACT ATAGGCATCG GGACATCTTT GTTTGAAAAA TCTTGACAAA 413 TTTGTAGGAC CACATGGGCC TTGAGTACAA CAATATTGTT GTCCTCCGAA CGTGGTACAA 41123 | ||||||| ||||||| || |||||| ||| |||||||||| |||||||||| || |||||| TCGGTAGGAC CACATGGACC TTGAGTGCAA CAATATTGTT GTCCTCCGAA TGTAGTACAA 473 GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GGACTAGGGC ATTCACCGTT TATATTAGCC 41183 |||||||||| |||||||||| |||||||||| | || ||||| |||||||||| ||||||||| GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GAACCAGGGC ATTCACCGTT TATATTAGCA 533 GTGCAATGAA TTGCATGGCA TTTTCCTCCA CTAGGATTGG TTGGGGCGAA AGTCATCGGT 41243 || |||| ||| ||| || |||||| | ||| || | ||||| |||| || ||| || ACACATTGAA TTGGATGACA TTTTCCCGGC CCAGGGTTAG TTGGGCCGAA AGACATAGGG 593 ATATTAAATC CGTCAACCAA AGAAATGTCC CAGAAATCTA GGTTGCTGAA TTGGTCCAAA 41303 || || |||| | |||| | |||||||||| |||||||||| |||||| || ||| | |||| ATGTTGAATC CATCAATAAC AGAAATGTCC CAGAAATCTA AGTTGCTAAA TTGATTCAAA 653 GCATATTCAG CTAGGGTGTT TGGGGGTTTG CCCCACCCGG TACAGTGTAG GACCCCACCA 41363 || ||||||| ||| |||||| ||| ||||| ||||| || | || | | ||| |||||| GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT TGCATTCCAA GACTCCACCA 713 CAATCACCAG TTTGGCATGA ACCTCTACCA GCACCATTAA AATTGCAATT AGTACGACCC 41423 |||||||| | | || CAATCACCGG TCTG...... .......... .......... .......... .......... 727 CATATACGTG CCATCTTAGT GCCCCTCGGC GCATTGATGA CCCATGTTTG GCCTCGATCG 41483 .......... .......... .......... .......... .......... .......... 727 AGACGTCGAC CACCGCCTAT CGGGGTCGAT GCTGCCCAAA CGGTGTAGGG ACAATTGTTG 41543 .......... .......... .......... .......... .......... .......... 727 CGTACCTCGA TAGTGGCAGC ATAAGTGTAA GTCACTAAAG CAAGGAAGAA GAAAATAAAA 41603 .......... .......... .......... .......... .......... .......... 727 GAAGATGTCA AGTAGCCCAT GTTTGTGTAC ATATTTTTGT TTATTTTTGA TATATAGTTA 41663 .......... .......... .......... .......... .......... .......... 727 CATATTATTG GGTAGTTTAT ATAGGGGTGT GACAACTTTT GGCACCTTGC ACATTTAGAA 41723 .......... .......... .......... .......... .......... .......... 727 TTCCACTATA TAAGTTGTGG AAATTTTTAC CATAAAGAAT TAAATGGATG GAATGATCAT 41783 .......... .......... .......... .......... .......... .......... 727 ATGGAAAATT CCTCTAAAGG AGAAATTTAC AAGCCACTTA AATTGGAGGA GGAATAGAGA 41843 .......... .......... .......... .......... .......... .......... 727 AAGTCATCAC ATGAAGTGAT ATTAATGACA ATATTATATA ATTGTCTTTT AATTTGTTAG 41903 .......... .......... .......... .......... .......... .......... 727 CAACAATAAA AAATTCATAG CTAATTCCTA ATCTGCAAAA ATGATTAATT CTTTATTTTC 41963 .......... .......... .......... .......... .......... .......... 727 TAGAGATTCA AAGTTAATTA ATTATAAAAC TCTCCCAATG AATTTAGAAA ACAGGGAATG 42023 .......... .......... .......... .......... .......... .......... 727 TTTTTTGGTT CGTAGGCAAG AA 42045 ||| || .......... .....GCACC AA 734 hqPGS_C08HBa0235H18.1+_SGN-E373165+ (40944 41377) ******************************************************************************** EST sequence 451 -strand 591 n (File: SGN-E551414-) 1 TCAAACAAAC AAATGTAAAA GAAATGTGTA CAAGGCAAAT TAAAGACAAT GTCCATCTTC 61 AAAACAAATT TAACAAAAAA GAGATTGGCT CAACTCAAGA TTTCTACTTA ATTAAGCCAC 121 TTCAAGAGTA TTTGTAGGAA TCTCCAATGG GAAATTTGTT GTTTCATTGT GAGTAGAGCC 181 ATAAGGACAA AACATAACCT TGTAGTCTGT AGTCCAACTC TGACAAGTAA AAGTACTTGT 241 TGGATCGTCT TGAGGATAAC TATAGGCATC GGGACATCTT TGTTTGAAAA ATCTTGACAA 301 ATCGGTAGGA CCACATGGAC CTTGAGTGCA ACAATATTGT TGTCCTCCGA ATGTAGTACA 361 AGGGTTGTTA CATCCTCCGG GTACCCTAAG TGAACCAGGG CATTCACCGT TTATATTAGC 421 AACACATTGA ATTGGATGAC ATTTTCCCGG CCCAGGGTTA GTTGGGCCGA AAGACATAGG 481 GATGTTGAAT CCATCAATAA CAGAAATGTC CCAGAAATCT AAGTTGCTAA ATTGATTCAA 541 AGCGTATTCA GCTAAGGTGT TTGGTGGTTT ACCCCATCCT TTGCATTCCA A Predicted gene structure (within gDNA segment 39522 to 45813): Exon 1 40944 41347 ( 404 n); cDNA 182 585 ( 404 n); score: 0.812 MATCH C08HBa0235H18.1+ SGN-E551414- 0.812 404 0.684 C PGS_C08HBa0235H18.1+_SGN-E551414- (40944 41347) Alignment (genomic DNA sequence = upper lines): TATGGGCAAA AAACAACCCT ATAATTTGTA CTACCACTAG GGCAAGTGAA TAAGCTAGTA 41003 || || |||| | | |||| | || | |||| | | ||| | ||||| || || || TAAGGACAAA ACATAACCTT GTAGTCTGTA GTCCAACTCT GACAAGTAAA AGTACTTGTT 241 GGATCATCTT GAGGGTAGCT ATACGCATTA GGGCACCTTT GTTTGAAAAA TCTCGAAAAT 41063 ||||| |||| |||| || || ||| |||| || || |||| |||||||||| ||| || || GGATCGTCTT GAGGATAACT ATAGGCATCG GGACATCTTT GTTTGAAAAA TCTTGACAAA 301 TTTGTAGGAC CACATGGGCC TTGAGTACAA CAATATTGTT GTCCTCCGAA CGTGGTACAA 41123 | ||||||| ||||||| || |||||| ||| |||||||||| |||||||||| || |||||| TCGGTAGGAC CACATGGACC TTGAGTGCAA CAATATTGTT GTCCTCCGAA TGTAGTACAA 361 GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GGACTAGGGC ATTCACCGTT TATATTAGCC 41183 |||||||||| |||||||||| |||||||||| | || ||||| |||||||||| ||||||||| GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GAACCAGGGC ATTCACCGTT TATATTAGCA 421 GTGCAATGAA TTGCATGGCA TTTTCCTCCA CTAGGATTGG TTGGGGCGAA AGTCATCGGT 41243 || |||| ||| ||| || |||||| | ||| || | ||||| |||| || ||| || ACACATTGAA TTGGATGACA TTTTCCCGGC CCAGGGTTAG TTGGGCCGAA AGACATAGGG 481 ATATTAAATC CGTCAACCAA AGAAATGTCC CAGAAATCTA GGTTGCTGAA TTGGTCCAAA 41303 || || |||| | |||| | |||||||||| |||||||||| |||||| || ||| | |||| ATGTTGAATC CATCAATAAC AGAAATGTCC CAGAAATCTA AGTTGCTAAA TTGATTCAAA 541 GCATATTCAG CTAGGGTGTT TGGGGGTTTG CCCCACCCGG TACA 41347 || ||||||| ||| |||||| ||| ||||| ||||| || | || GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT TGCA 585 hqPGS_C08HBa0235H18.1+_SGN-E551414- (40944 41347) ******************************************************************************** EST sequence 776 -strand 627 n (File: SGN-E206005-) 1 GCATCGATCA TAGATTGTTA TTCAGATCTT AGCCACTTCA AGCAAACAAA TGTAAAAGAA 61 ATGTGTACAA GGCAAATTAG ACACAATGTC CATCTTCAAA ACAAATTTAA CAAAACAGAG 121 ATTGGCTCAA CTCAAGATTT CTACTTAATT AAGCCACTTC AAGAGTATTT GTAGGAATCT 181 CCAATGGGAA ATTTGTTGTT TCATTGTGAG TAGAGCCATA AGGACAAAAC ATAACCTTGT 241 AGTCTGTAGT CCAACTCTGA CAAGTAAAAG TACTTGTTGG ATCGTCTTGA GGATAACTAT 301 AGGCATCGGG ACATCTTTGT TTGAAAAATC TTGACAAATC GGTAGGACCA CATGGACCTT 361 GAGTGCAACA ATATTGTTGT CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA 421 CCATAAGTGA ACCAGGGCAT TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT 481 TTCCCGGCCC AGGGTTAGTT GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG 541 AAATGTCCCA GAAATCTAAG TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG 601 GTGGTTTACC CCATCCTTTG CATTCCA Predicted gene structure (within gDNA segment 36588 to 43482): Exon 1 40944 41347 ( 404 n); cDNA 219 622 ( 404 n); score: 0.809 MATCH C08HBa0235H18.1+ SGN-E206005- 0.809 404 0.644 C PGS_C08HBa0235H18.1+_SGN-E206005- (40944 41347) Alignment (genomic DNA sequence = upper lines): TATGGGCAAA AAACAACCCT ATAATTTGTA CTACCACTAG GGCAAGTGAA TAAGCTAGTA 41003 || || |||| | | |||| | || | |||| | | ||| | ||||| || || || TAAGGACAAA ACATAACCTT GTAGTCTGTA GTCCAACTCT GACAAGTAAA AGTACTTGTT 278 GGATCATCTT GAGGGTAGCT ATACGCATTA GGGCACCTTT GTTTGAAAAA TCTCGAAAAT 41063 ||||| |||| |||| || || ||| |||| || || |||| |||||||||| ||| || || GGATCGTCTT GAGGATAACT ATAGGCATCG GGACATCTTT GTTTGAAAAA TCTTGACAAA 338 TTTGTAGGAC CACATGGGCC TTGAGTACAA CAATATTGTT GTCCTCCGAA CGTGGTACAA 41123 | ||||||| ||||||| || |||||| ||| |||||||||| |||||||||| || |||||| TCGGTAGGAC CACATGGACC TTGAGTGCAA CAATATTGTT GTCCTCCGAA TGTAGTACAA 398 GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GGACTAGGGC ATTCACCGTT TATATTAGCC 41183 |||||||||| |||||||||| |||| ||||| | || ||||| |||||||||| ||||||||| GGGTTGTTAC ATCCTCCGGG TACCATAAGT GAACCAGGGC ATTCACCGTT TATATTAGCA 458 GTGCAATGAA TTGCATGGCA TTTTCCTCCA CTAGGATTGG TTGGGGCGAA AGTCATCGGT 41243 || |||| ||| ||| || |||||| | ||| || | ||||| |||| || ||| || ACACATTGAA TTGGATGACA TTTTCCCGGC CCAGGGTTAG TTGGGCCGAA AGACATAGGG 518 ATATTAAATC CGTCAACCAA AGAAATGTCC CAGAAATCTA GGTTGCTGAA TTGGTCCAAA 41303 || || |||| | |||| | |||||||||| |||||||||| |||||| || ||| | |||| ATGTTGAATC CATCAATAAC AGAAATGTCC CAGAAATCTA AGTTGCTAAA TTGATTCAAA 578 GCATATTCAG CTAGGGTGTT TGGGGGTTTG CCCCACCCGG TACA 41347 || ||||||| ||| |||||| ||| ||||| ||||| || | || GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT TGCA 622 hqPGS_C08HBa0235H18.1+_SGN-E206005- (40944 41347) ******************************************************************************** EST sequence 620 -strand 593 n (File: SGN-E302004-) 1 TTTTTTTTTT CGATCATAGA TTGTTATTCA GATCTTAGCC ACTTCAAACA AACAAATGTA 61 AAAGAAATGT GTACAAGGCA AATTAAAGAC AATGTCCATC TTCAAAACAA ATTTAACAAA 121 AAAGAGATTG GCTCAACTCA AGATTTCTAC TTAATTAAGC CACTTCAAGA GTATTTGTAG 181 GAATCTCCAA TGGGAAATTT GTTGTTTCAT TGTGAGTAGA GCCATAAGGA CAAAACATAA 241 CCTTGTAGTC TGTAGTCCAA CTCTGACAAG TAAAAGTACT TGTTGGATCG TCTTGAGGAT 301 AACTATAGGC ATCGGGACAT CTTTGTTTGA AAAATCTTGA CAAATCGGTA GGACCACATG 361 GACCTTGAGT GCAACAATAT TGTTGTCCTC CGAATGTAGT ACAAGGGTTG TTACATCCTC 421 CGGGTACCTT AAGTGAACCA GGGCATTCAC CGTTTATATT AGCAACACAT TGAATTGGAT 481 GACATTTTCC CGGCCCAGGG TTAGTTGGGC CGAAAGACAT AGGGATGTTG AATCCATCAA 541 TAACAGAAAT GTCCCAGAAA TCTAAGTTGC TCCTCGTGCC GATTCGGCAC GAG Predicted gene structure (within gDNA segment 39092 to 45403): Exon 1 40944 41313 ( 370 n); cDNA 225 593 ( 369 n); score: 0.781 PPA cDNA 10 1 MATCH C08HBa0235H18.1+ SGN-E302004- 0.781 370 0.624 C PGS_C08HBa0235H18.1+_SGN-E302004- (40944 41313) Alignment (genomic DNA sequence = upper lines): TATGGGCAAA AAACAACCCT ATAATTTGTA CTACCACTAG GGCAAGTGAA TAAGCTAGTA 41003 || || |||| | | |||| | || | |||| | | ||| | ||||| || || || TAAGGACAAA ACATAACCTT GTAGTCTGTA GTCCAACTCT GACAAGTAAA AGTACTTGTT 284 GGATCATCTT GAGGGTAGCT ATACGCATTA GGGCACCTTT GTTTGAAAAA TCTCGAAAAT 41063 ||||| |||| |||| || || ||| |||| || || |||| |||||||||| ||| || || GGATCGTCTT GAGGATAACT ATAGGCATCG GGACATCTTT GTTTGAAAAA TCTTGACAAA 344 TTTGTAGGAC CACATGGGCC TTGAGTACAA CAATATTGTT GTCCTCCGAA CGTGGTACAA 41123 | ||||||| ||||||| || |||||| ||| |||||||||| |||||||||| || |||||| TCGGTAGGAC CACATGGACC TTGAGTGCAA CAATATTGTT GTCCTCCGAA TGTAGTACAA 404 GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GGACTAGGGC ATTCACCGTT TATATTAGCC 41183 |||||||||| |||||||||| |||| ||||| | || ||||| |||||||||| ||||||||| GGGTTGTTAC ATCCTCCGGG TACCTTAAGT GAACCAGGGC ATTCACCGTT TATATTAGCA 464 GTGCAATGAA TTGCATGGCA TTTTCCTCCA CTAGGATTGG TTGGGGCGAA AGTCATCGGT 41243 || |||| ||| ||| || |||||| | ||| || | ||||| |||| || ||| || ACACATTGAA TTGGATGACA TTTTCCCGGC CCAGGGTTAG TTGGGCCGAA AGACATAGGG 524 ATATTAAATC CGTCAACCAA AGAAATGTCC CAGAAATCTA GGTTGCTGAA TTGGTCCAAA 41303 || || |||| | |||| | |||||||||| |||||||||| |||||| | | || | ATGTTGAATC CATCAATAAC AGAAATGTCC CAGAAATCTA AGTTGCT-CC TCGTGCCGAT 583 GCATATTCAG 41313 | || TCGGCACGAG 593 hqPGS_C08HBa0235H18.1+_SGN-E302004- (40944 41313) ******************************************************************************** EST sequence 1210 -strand 805 n (File: SGN-E260562-) 1 TTCATTACGG TAGAGATCAG TGACTAATGA GGGCGATTAA AATGAGAAAA CTCAAATTCA 61 CTNGGCCACT TCATCAGTAC TGCAGGGCAT CTCCAAGGGG AAATTTGGAT CAGCAACACC 121 ATTAGGACAA AAGACAACCC TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT 181 AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA 241 CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA 301 AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC 361 CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG 421 AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA 481 GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC 541 ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC 601 CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG ACCCATGTTT GGCCTCGATT 661 GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA ACGGTGTATG GACAGTTGTT 721 GCGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACACAA AGAAGGAAGA AGAGAACAAA 781 AGAAGATGTC AAGTAGCCCA TGTTT Predicted gene structure (within gDNA segment 37801 to 43316): Exon 1 40947 41627 ( 681 n); cDNA 125 805 ( 681 n); score: 0.880 MATCH C08HBa0235H18.1+ SGN-E260562- 0.880 681 0.846 C PGS_C08HBa0235H18.1+_SGN-E260562- (40947 41627) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||||| |||| ||| ||| |||||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA 184 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 || ||||| | |||||||||| |||| || || |||| | |||||||| | || || | | TCGTCTTGTG GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT 244 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 ||||| |||| |||| ||||| || |||||| |||||||||| |||| ||||| |||||||||| GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 304 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 |||||||||| |||| ||||| | |||| | | ||| |||| |||| ||||| ||| |||||| TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 364 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 |||||||||| | || ||||| |||||||||| || || |||| |||| ||||| ||| || ||| CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 424 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 |||||||| | | || ||||| ||||||||| ||||||| || |||| || || |||||| || TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 484 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 || || |||| |||||||||| |||||||||| || ||||||| | |||| ||| ||||||||| TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA 544 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT ACGACCCCAT 41426 |||||||| | | |||| ||| ||| || ||| ||||||| | ||||| ||| |||||||||| TCACCAGTCT GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT 604 ATACGTGCCA TCTTAGTGCC CCTCGGCGCA TTGATGACCC ATGTTTGGCC TCGATCGAGA 41486 |||||||||| ||||||| || |||||| ||| |||||||||| |||||||||| ||||| |||| ATACGTGCCA TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA 664 CGTCGACCAC CGCCTATCGG GGTCGATGCT GCCCAAACGG TGTAGGGACA ATTGTTGCGT 41546 |||||||||| |||||||||| |||||||| |||||||||| |||| ||||| ||||||||| CGTCGACCAC CGCCTATCGG AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT 724 ACCTCGATAG TGGCAGCATA AGTGTAAGTC ACTAAAGCAA GGAAGAAGAA AATAAAAGAA 41606 ||||| |||| |||||||||| ||| |||||| || || || ||||||||| || ||||||| ACCTCAATAG TGGCAGCATA AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA 784 GATGTCAAGT AGCCCATGTT T 41627 |||||||||| |||||||||| | GATGTCAAGT AGCCCATGTT T 805 hqPGS_C08HBa0235H18.1+_SGN-E260562- (40947 41627) ******************************************************************************** EST sequence 486 -strand 786 n (File: SGN-E210798-) 1 GGTAGAGATC AGTTGACTAA TGAGGGCGAT TTAAAATGAA GAAACTCAAA TTCACTTGGC 61 CACTTCATCA GTACTTGCAG GCATCTCCAA GGGGAAATTT GGATCAGCAA CACCATTAGG 121 ACAAAAGACA ACCCTATAGT TTGTACTACC ACCANGGGCA AGTAAATGTG CTTGTAGGAT 181 CGTCTTGTGG GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG GACAACTCTG 241 TAGGGCCACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT 301 TGTTACATCC TCCAGGTACC TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC 361 AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT 421 TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT 481 ACTCGGCTAG GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT 541 CACCAGTCTG ACATGTACCT CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA 601 TACGTGCCAT CTTAGTTCCC CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC 661 GTCGACCACC GCCTATCGGA GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA 721 CCTCAATAGT GGCAGCATAA GTATAAGTCA CACAAAGAAG GAAGAAGAGA ACAAAAGAAG 781 ATGTCA Predicted gene structure (within gDNA segment 37851 to 43176): Exon 1 40947 41613 ( 667 n); cDNA 119 786 ( 668 n); score: 0.873 MATCH C08HBa0235H18.1+ SGN-E210798- 0.873 667 0.849 C PGS_C08HBa0235H18.1+_SGN-E210798- (40947 41613) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTA-GGG CAAGTGAATA AGCTAGTAGG 41005 || ||||| | |||||||||| ||||||||| |||| | ||| ||||| ||| ||| ||||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCANGGG CAAGTAAATG TGCTTGTAGG 178 ATCATCTTGA GGGTAGCTAT ACGCATTAGG GCACCTTTGT TTGAAAAATC TCGAAAATTT 41065 ||| ||||| |||||||||| | |||| || || |||| ||||||||| | || || | ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC 238 TGTAGGACCA CATGGGCCTT GAGTACAACA ATATTGTTGT CCTCCGAACG TGGTACAAGG 41125 |||||| ||| ||||| |||| | || ||||| |||||||||| ||||| |||| |||||||||| TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG 298 GTTGTTACAT CCTCCGGGTA CCCTAAGTGG ACTAGGGCAT TCACCGTTTA TATTAGCCGT 41185 |||||||||| ||||| |||| || |||| | | ||| ||| ||||| |||| |||| ||||| GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT 358 GCAATGAATT GCATGGCATT TTCCTCCACT AGGATTGGTT GGGGCGAAAG TCATCGGTAT 41245 |||||||||| || || |||| |||||||||| ||| || ||| ||||| |||| |||| || || GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT 418 ATTAAATCCG TCAACCAAAG AAATGTCCCA GAAATCTAGG TTGCTGAATT GGTCCAAAGC 41305 ||||||||| || || |||| |||||||||| ||||||| | ||||| || | ||||||| || ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC 478 ATATTCAGCT AGGGTGTTTG GGGGTTTGCC CCACCCGGTA CAGTGTAGGA CCCCACCACA 41365 || || ||| |||||||||| |||||||||| ||| |||||| || |||| || | |||||||| GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA 538 ATCACCAGTT TGGCATGAAC CTCTACCAGC ACCATTAAAA TTGCAATTAG TACGACCCCA 41425 ||||||||| || |||| || |||| || || | ||||||| |||||| || |||||||||| ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA 598 TATACGTGCC ATCTTAGTGC CCCTCGGCGC ATTGATGACC CATGTTTGGC CTCGATCGAG 41485 |||||||||| |||||||| | ||||||| || |||||||||| |||||||||| |||||| ||| TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG 658 ACGTCGACCA CCGCCTATCG GGGTCGATGC TGCCCAAACG GTGTAGGGAC AATTGTTGCG 41545 |||||||||| |||||||||| | |||||||| ||||||||| ||||| |||| | |||||||| ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG 718 TACCTCGATA GTGGCAGCAT AAGTGTAAGT CACTAAAGCA AGGAAGAAGA AAATAAAAGA 41605 |||||| ||| |||||||||| |||| ||||| ||| || | |||||||||| || |||||| TACCTCAATA GTGGCAGCAT AAGTATAAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA 778 AGATGTCA 41613 |||||||| AGATGTCA 786 hqPGS_C08HBa0235H18.1+_SGN-E210798- (40947 41613) ******************************************************************************** EST sequence 854 -strand 713 n (File: SGN-E214128-) 1 ATTTAAATGA AGAAACTCAA ATCACTTGGC CACTTCATCA GTACTGCAGG GCATCTCCAA 61 GGGGAAATTG GATCAGCACN ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA 121 CCAGGGCAAG TAAATGTGCT TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT 181 CTTTTCTTGA AAAATTTGGA CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT 241 TGTTGTCCTC CAAACGTGGT ACAAGGGTTG TTACATCCTC CAGGTACCTT AAGGGCGCGA 301 GGACATTCAC CATTTATATT GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT 361 TTTGTTGGGG CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA 421 TCTAAGTTGC TAAACTGGTC CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT 481 CCGGTACACT GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA 541 TTAAAGTTGC AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG 601 ATGACCCATG TTTGGCCTCG ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC 661 CAAACGGTGT ATGGACAGTT GTTGCGTACC TCAATAGTGG CAGCATAAGT ATA Predicted gene structure (within gDNA segment 38171 to 42766): Exon 1 40947 41572 ( 626 n); cDNA 88 713 ( 626 n); score: 0.879 MATCH C08HBa0235H18.1+ SGN-E214128- 0.879 626 0.878 C PGS_C08HBa0235H18.1+_SGN-E214128- (40947 41572) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||||| |||| ||| ||| |||||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA 147 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 || ||||| | |||||||||| |||| || || |||| | |||||||| | || || | | TCGTCTTGTG GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT 207 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 ||||| |||| |||| ||||| || |||||| |||||||||| |||| ||||| |||||||||| GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 267 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 |||||||||| |||| ||||| | |||| | | ||| |||| |||| ||||| ||| |||||| TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 327 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 |||||||||| | || ||||| |||||||||| || || |||| |||| ||||| ||| || ||| CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 387 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 |||||||| | | || ||||| ||||||||| ||||||| || |||| || || |||||| || TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 447 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 || || |||| |||||||||| |||||||||| || ||||||| | |||| ||| ||||||||| TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA 507 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT ACGACCCCAT 41426 |||||||| | | |||| ||| ||| || ||| ||||||| | ||||| ||| |||||||||| TCACCAGTCT GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT 567 ATACGTGCCA TCTTAGTGCC CCTCGGCGCA TTGATGACCC ATGTTTGGCC TCGATCGAGA 41486 |||||||||| ||||||| || |||||| ||| |||||||||| |||||||||| ||||| |||| ATACGTGCCA TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA 627 CGTCGACCAC CGCCTATCGG GGTCGATGCT GCCCAAACGG TGTAGGGACA ATTGTTGCGT 41546 |||||||||| |||||||||| |||||||| |||||||||| |||| ||||| ||||||||| CGTCGACCAC CGCCTATCGG AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT 687 ACCTCGATAG TGGCAGCATA AGTGTA 41572 ||||| |||| |||||||||| ||| || ACCTCAATAG TGGCAGCATA AGTATA 713 hqPGS_C08HBa0235H18.1+_SGN-E214128- (40947 41572) ******************************************************************************** EST sequence 541 -strand 750 n (File: SGN-E263617-) 1 TTTCATTACG GTAGAGATCA GTTGACTAAT GNAGGCGATT TAAAATGAAG AAACTCAAAT 61 TCACTTGGCC ACTTCATCAG TACTTGCAGG CATCTCCAAG GGGAAATTTG GATCAGCAAC 121 ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT 181 TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA 241 CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT 301 ACAAGGGTTG TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT 361 GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT 421 TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC 481 CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC 541 ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG 601 ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG TTTGGCCTCG 661 ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT ATGGACAGTT 721 GTTGCGTACC TCAATAGTGG CAGCATAAGT Predicted gene structure (within gDNA segment 37771 to 42736): Exon 1 40947 41569 ( 623 n); cDNA 128 750 ( 623 n); score: 0.880 MATCH C08HBa0235H18.1+ SGN-E263617- 0.880 623 0.831 C PGS_C08HBa0235H18.1+_SGN-E263617- (40947 41569) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||||| |||| ||| ||| |||||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA 187 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 || ||||| | |||||||||| |||| || || |||| | |||||||| | || || | | TCGTCTTGTG GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT 247 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 ||||| |||| |||| ||||| || |||||| |||||||||| |||| ||||| |||||||||| GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 307 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 |||||||||| |||| ||||| | |||| | | ||| |||| |||| ||||| ||| |||||| TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 367 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 |||||||||| | || ||||| |||||||||| || || |||| |||| ||||| ||| || ||| CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 427 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 |||||||| | | || ||||| ||||||||| ||||||| || |||| || || |||||| || TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 487 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 || || |||| |||||||||| |||||||||| || ||||||| | |||| ||| ||||||||| TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA 547 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT ACGACCCCAT 41426 |||||||| | | |||| ||| ||| || ||| ||||||| | ||||| ||| |||||||||| TCACCAGTCT GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT 607 ATACGTGCCA TCTTAGTGCC CCTCGGCGCA TTGATGACCC ATGTTTGGCC TCGATCGAGA 41486 |||||||||| ||||||| || |||||| ||| |||||||||| |||||||||| ||||| |||| ATACGTGCCA TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA 667 CGTCGACCAC CGCCTATCGG GGTCGATGCT GCCCAAACGG TGTAGGGACA ATTGTTGCGT 41546 |||||||||| |||||||||| |||||||| |||||||||| |||| ||||| ||||||||| CGTCGACCAC CGCCTATCGG AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT 727 ACCTCGATAG TGGCAGCATA AGT 41569 ||||| |||| |||||||||| ||| ACCTCAATAG TGGCAGCATA AGT 750 hqPGS_C08HBa0235H18.1+_SGN-E263617- (40947 41569) ******************************************************************************** EST sequence 684 -strand 753 n (File: SGN-E212205-) 1 TAAGATTTTC ATTACGGTAG AGATCAGTTG ACTAATTGAG GCGATTTAAA TGAAGAAACT 61 CAAATTCACT TGGCCACTTC ATCAGTACTT GCAGGCATCT CCAAGGGGAA ATTTGGATCA 121 GCAACACCAT TAGGACAAAA GACAACCCTA TAGTTTGTAC TACCACCANG GGCAAGTAAA 181 TGTGCTTGTA GGATCGTCTT GTGGGTAGCT ATAAGCATCG GGACATCTTT TCTTGAAAAA 241 TTTGGACAAC TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT GTCCTCCAAA 301 CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT 361 TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA 421 AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA 481 CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA 541 GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC 601 AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG 661 GCCTCGATTG AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG 721 ACAGTTGTTG CGTACCTCAA TAGTGGCAGC ATA Predicted gene structure (within gDNA segment 37711 to 42706): Exon 1 40947 41566 ( 620 n); cDNA 133 753 ( 621 n); score: 0.875 MATCH C08HBa0235H18.1+ SGN-E212205- 0.875 620 0.823 C PGS_C08HBa0235H18.1+_SGN-E212205- (40947 41566) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTA-GGG CAAGTGAATA AGCTAGTAGG 41005 || ||||| | |||||||||| ||||||||| |||| | ||| ||||| ||| ||| ||||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCANGGG CAAGTAAATG TGCTTGTAGG 192 ATCATCTTGA GGGTAGCTAT ACGCATTAGG GCACCTTTGT TTGAAAAATC TCGAAAATTT 41065 ||| ||||| |||||||||| | |||| || || |||| ||||||||| | || || | ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC 252 TGTAGGACCA CATGGGCCTT GAGTACAACA ATATTGTTGT CCTCCGAACG TGGTACAAGG 41125 |||||| ||| ||||| |||| | || ||||| |||||||||| ||||| |||| |||||||||| TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG 312 GTTGTTACAT CCTCCGGGTA CCCTAAGTGG ACTAGGGCAT TCACCGTTTA TATTAGCCGT 41185 |||||||||| ||||| |||| || |||| | | ||| ||| ||||| |||| |||| ||||| GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT 372 GCAATGAATT GCATGGCATT TTCCTCCACT AGGATTGGTT GGGGCGAAAG TCATCGGTAT 41245 |||||||||| || || |||| |||||||||| ||| || ||| ||||| |||| |||| || || GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT 432 ATTAAATCCG TCAACCAAAG AAATGTCCCA GAAATCTAGG TTGCTGAATT GGTCCAAAGC 41305 ||||||||| || || |||| |||||||||| ||||||| | ||||| || | ||||||| || ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC 492 ATATTCAGCT AGGGTGTTTG GGGGTTTGCC CCACCCGGTA CAGTGTAGGA CCCCACCACA 41365 || || ||| |||||||||| |||||||||| ||| |||||| || |||| || | |||||||| GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA 552 ATCACCAGTT TGGCATGAAC CTCTACCAGC ACCATTAAAA TTGCAATTAG TACGACCCCA 41425 ||||||||| || |||| || |||| || || | ||||||| |||||| || |||||||||| ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA 612 TATACGTGCC ATCTTAGTGC CCCTCGGCGC ATTGATGACC CATGTTTGGC CTCGATCGAG 41485 |||||||||| |||||||| | ||||||| || |||||||||| |||||||||| |||||| ||| TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG 672 ACGTCGACCA CCGCCTATCG GGGTCGATGC TGCCCAAACG GTGTAGGGAC AATTGTTGCG 41545 |||||||||| |||||||||| | |||||||| ||||||||| ||||| |||| | |||||||| ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG 732 TACCTCGATA GTGGCAGCAT A 41566 |||||| ||| |||||||||| | TACCTCAATA GTGGCAGCAT A 753 hqPGS_C08HBa0235H18.1+_SGN-E212205- (40947 41566) ******************************************************************************** EST sequence 698 -strand 726 n (File: SGN-E213837-) 1 GGTAGAGATC AGTTGACTAA TGNAGGCGAT TTAAAATGAA GAAACTCAAA TTCACTTGGC 61 CACTTCATCA GTACTTGCAG GCATCTCCAA GGGGAAATTT GGATCAGCAA CACCATTAGG 121 ACAAAAGACA ACCNTATAGT TTGTACTACC ACCAGGGCAA GTAAATGTGC TTGTAGGATC 181 GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG AAAAATTTGG ACAACTCTGT 241 AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT CCAAACGTGG TACAAGGGTT 301 GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA 361 ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG GCAAAAGTCA TTGGAATATT 421 AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG CTAAACTGGT CCAAGGCGTA 481 CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC TGTAAGACTC CACCACAATC 541 ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG CAACCAGTAC GACCCCATAT 601 ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG 661 TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG TATGGACAGT TGTTGCGTAC 721 CTCAAT Predicted gene structure (within gDNA segment 37861 to 42586): Exon 1 40947 41554 ( 608 n); cDNA 119 726 ( 608 n); score: 0.875 MATCH C08HBa0235H18.1+ SGN-E213837- 0.875 608 0.837 C PGS_C08HBa0235H18.1+_SGN-E213837- (40947 41554) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | ||||| |||| ||||||||| |||| ||||| |||| ||| ||| |||||| GGACAAAAGA CAACCNTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA 178 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 || ||||| | |||||||||| |||| || || |||| | |||||||| | || || | | TCGTCTTGTG GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT 238 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 ||||| |||| |||| ||||| || |||||| |||||||||| |||| ||||| |||||||||| GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 298 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 |||||||||| |||| ||||| | |||| | | ||| |||| |||| ||||| ||| |||||| TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 358 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 |||||||||| | || ||||| |||||||||| || || |||| |||| ||||| ||| || ||| CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 418 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 |||||||| | | || ||||| ||||||||| ||||||| || |||| || || |||||| || TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 478 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 || || |||| |||||||||| |||||||||| || ||||||| | |||| ||| ||||||||| TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA 538 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT ACGACCCCAT 41426 |||||||| | | |||| ||| ||| || ||| ||||||| | ||||| ||| |||||||||| TCACCAGTCT GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT 598 ATACGTGCCA TCTTAGTGCC CCTCGGCGCA TTGATGACCC ATGTTTGGCC TCGATCGAGA 41486 |||||||||| ||||||| || |||||| ||| |||||||||| |||||||||| ||||| |||| ATACGTGCCA TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA 658 CGTCGACCAC CGCCTATCGG GGTCGATGCT GCCCAAACGG TGTAGGGACA ATTGTTGCGT 41546 |||||||||| |||||||||| |||||||| |||||||||| |||| ||||| ||||||||| CGTCGACCAC CGCCTATCGG AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT 718 ACCTCGAT 41554 ||||| || ACCTCAAT 726 hqPGS_C08HBa0235H18.1+_SGN-E213837- (40947 41554) ******************************************************************************** EST sequence 961 -strand 550 n (File: SGN-E256630-) 1 ATTAGGACAA AAGACAACCC TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT 61 AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA 121 CTCTGTAGGG CCACATGGAC TTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA 181 AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC 241 CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG 301 AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA 361 GGCGTACTCG GATAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC 421 ACAATCACCA GTCTGACATG TACCTCTGCT TGCAGCATTA AAGTTGCAAC CAGTACGACC 481 CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG ACCCATGTTT GGCTTCGATT 541 GAGACGTCGC Predicted gene structure (within gDNA segment 39001 to 42245): Exon 1 40947 41491 ( 545 n); cDNA 5 549 ( 545 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E256630- 0.864 545 0.991 C PGS_C08HBa0235H18.1+_SGN-E256630- (40947 41491) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||||| |||| ||| ||| |||||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA 64 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 || ||||| | |||||||||| |||| || || |||| | |||||||| | || || | | TCGTCTTGTG GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT 124 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 ||||| |||| |||| | ||| || |||||| |||||||||| |||| ||||| |||||||||| GTAGGGCCAC ATGGACTTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 184 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 |||||||||| |||| ||||| | |||| | | ||| |||| |||| ||||| ||| |||||| TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 244 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 |||||||||| | || ||||| |||||||||| || || |||| |||| ||||| ||| || ||| CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 304 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 |||||||| | | || ||||| ||||||||| ||||||| || |||| || || |||||| || TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 364 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 || || | || |||||||||| |||||||||| || ||||||| | |||| ||| ||||||||| TACTCGGATA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA 424 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT ACGACCCCAT 41426 |||||||| | | |||| ||| ||| | ||| ||||||| | ||||| ||| |||||||||| TCACCAGTCT GACATGTACC TCTGCTTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT 484 ATACGTGCCA TCTTAGTGCC CCTCGGCGCA TTGATGACCC ATGTTTGGCC TCGATCGAGA 41486 |||||||||| ||||||| || |||||| ||| |||||||||| ||||||||| ||||| |||| ATACGTGCCA TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTGGCT TCGATTGAGA 544 CGTCG 41491 ||||| CGTCG 549 hqPGS_C08HBa0235H18.1+_SGN-E256630- (40947 41491) ******************************************************************************** EST sequence 518 -strand 713 n (File: SGN-E210944-) 1 TATCAATAAA GTAAAAGTGA ATATTTAAAA AACTGAGCTA TTAAGATTTT TCATTACGGT 61 AGAGATCAGT TGACTAATTG AGGCGATTTA AAATGAAGAA ACTCAAATTC ACTTGGCCAC 121 TTCATCAGTA CTTGCAGGCA TCTCCAAGGG GAAATTTGGA TCAGCAACAC CATTAGGACA 181 AAAGACAACC CTATAGTTTG TACTACCACC AGGGCAAGTA AATGTGCTTG TAGGATCGTC 241 TTGTGGGTAG CTATAAGCAT CGGGACATCT TTTCTTGAAA AATTTGGACA ACTCTGTAGG 301 GCCACATGGA CCTTGGGTGC AACAATATTG TTGTCCTCCA AACGTGGTAC AAGGGTTGTT 361 ACATCCTCCA GGTACCTTAA GGGCGCGAGG ACATTCACCA TTTATATTGG CCGTGCAATG 421 AATTGCGTGA CATTTTCCTC CACTAGGTTT TGTTGGGGCA AAAGTCATTG GAATATTAAA 481 TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA AACTGGTCCA AGGCGTACTC 541 GGCTAGGGTG TTTGGGGGTT TGCCCCATCC GGTACACTGT AAGACTCCAC CACAATCACC 601 AGTCTGACAT GTACCTCTGC CTGCAGCATT AAAGTTGCAA CCAGTACGAC CCCATATACG 661 TGCCATCTTA GTTCCCCTCG GAGCATTGAT GACCCATGTT TGGCCTCGAT TGA Predicted gene structure (within gDNA segment 37291 to 42111): Exon 1 40947 41484 ( 538 n); cDNA 176 713 ( 538 n); score: 0.870 MATCH C08HBa0235H18.1+ SGN-E210944- 0.870 538 0.755 C PGS_C08HBa0235H18.1+_SGN-E210944- (40947 41484) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||||| |||| ||| ||| |||||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA 235 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 || ||||| | |||||||||| |||| || || |||| | |||||||| | || || | | TCGTCTTGTG GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT 295 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 ||||| |||| |||| ||||| || |||||| |||||||||| |||| ||||| |||||||||| GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 355 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 |||||||||| |||| ||||| | |||| | | ||| |||| |||| ||||| ||| |||||| TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 415 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 |||||||||| | || ||||| |||||||||| || || |||| |||| ||||| ||| || ||| CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 475 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 |||||||| | | || ||||| ||||||||| ||||||| || |||| || || |||||| || TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 535 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 || || |||| |||||||||| |||||||||| || ||||||| | |||| ||| ||||||||| TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA 595 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT ACGACCCCAT 41426 |||||||| | | |||| ||| ||| || ||| ||||||| | ||||| ||| |||||||||| TCACCAGTCT GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT 655 ATACGTGCCA TCTTAGTGCC CCTCGGCGCA TTGATGACCC ATGTTTGGCC TCGATCGA 41484 |||||||||| ||||||| || |||||| ||| |||||||||| |||||||||| ||||| || ATACGTGCCA TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGA 713 hqPGS_C08HBa0235H18.1+_SGN-E210944- (40947 41484) ******************************************************************************** EST sequence 810 -strand 697 n (File: SGN-E375347-) 1 ATAAAGTAAA AGTGAATATT TAAAAAACTG AGCTATTAAG ATTTTTCATT ACGGTAGAGA 61 TCAGTTGACT AATTGAGGCG ATTTAAAATG AAGAAACTCA AATTCACTTG GCCACTTCAT 121 CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTGGATCAGC AACACCATTA GGACAAAAGA 181 CAACCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA TCGTCTTGTG 241 GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT GTAGGGCCAC 301 ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC 361 CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG 421 CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT 481 CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA 541 GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT 601 GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA 661 TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTG Predicted gene structure (within gDNA segment 37341 to 42073): Exon 1 40947 41473 ( 527 n); cDNA 171 697 ( 527 n); score: 0.869 MATCH C08HBa0235H18.1+ SGN-E375347- 0.869 527 0.756 C PGS_C08HBa0235H18.1+_SGN-E375347- (40947 41473) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||||| |||| ||| ||| |||||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA 230 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 || ||||| | |||||||||| |||| || || |||| | |||||||| | || || | | TCGTCTTGTG GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT 290 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 ||||| |||| |||| ||||| || |||||| |||||||||| |||| ||||| |||||||||| GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 350 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 |||||||||| |||| ||||| | |||| | | ||| |||| |||| ||||| ||| |||||| TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 410 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 |||||||||| | || ||||| |||||||||| || || |||| |||| ||||| ||| || ||| CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 470 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 |||||||| | | || ||||| ||||||||| ||||||| || |||| || || |||||| || TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 530 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 || || |||| |||||||||| |||||||||| || ||||||| | |||| ||| ||||||||| TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA 590 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT ACGACCCCAT 41426 |||||||| | | |||| ||| ||| || ||| ||||||| | ||||| ||| |||||||||| TCACCAGTCT GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT 650 ATACGTGCCA TCTTAGTGCC CCTCGGCGCA TTGATGACCC ATGTTTG 41473 |||||||||| ||||||| || |||||| ||| |||||||||| ||||||| ATACGTGCCA TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTG 697 hqPGS_C08HBa0235H18.1+_SGN-E375347- (40947 41473) ******************************************************************************** EST sequence 497 -strand 730 n (File: SGN-E210719-) 1 TTTTTTGAGA TGTAACTCTT ATTCCGGTCT TTAAGTTTGC TACGAACTCT TATCAATAAA 61 GTAAAAGTGA ATATTTAAAA AACTGAGCTA TTAAGATCTT TCATTACGGT AGAGATCAGT 121 TGACTAATTG AGGCGATTTA AAATGAAGAA ACTCAAATTC ACTTGGCCAC TTCATCAGTA 181 CTTGCAGGCA TCTCCAAGGG GAAATTTGGA TCAGCAACAC CATTAGGACA AAAGACAACC 241 CTATAGTTTG TACTACCACC AGGGCAAGTA AATGTGCTTG TAGGATCGTC TTGTGGGTAG 301 CTATAAGCAT CGGGACATCT TTTCTTGAAA AATTTGGACA ACTCTGTAGG GCCACATGGA 361 CCTTGGGTGC AACAATATTG TTGTCCTCCA AACGTGGTAC AAGGGTTGTT ACATCCTCCA 421 GGTACCTTAA GGGCGCGAGG ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA 481 CATTTTCCTC CACTAGGTTT TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT 541 AAAGAAATGT CCCAAAAATC TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG 601 TTTGGGGGTT TGCCCCATCC GGTACACTGT AAGACTCCAC CACAATCACC AGTATGACAT 661 GTACCTCTGC CTGCAGCATT AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA 721 GTTCCCCTCG Predicted gene structure (within gDNA segment 36791 to 42123): Exon 1 40947 41451 ( 505 n); cDNA 226 730 ( 505 n); score: 0.865 MATCH C08HBa0235H18.1+ SGN-E210719- 0.865 505 0.692 C PGS_C08HBa0235H18.1+_SGN-E210719- (40947 41451) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||||| |||| ||| ||| |||||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA 285 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 || ||||| | |||||||||| |||| || || |||| | |||||||| | || || | | TCGTCTTGTG GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT 345 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 ||||| |||| |||| ||||| || |||||| |||||||||| |||| ||||| |||||||||| GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 405 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 |||||||||| |||| ||||| | |||| | | ||| |||| |||| ||||| ||| |||||| TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 465 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 |||||||||| | || ||||| |||||||||| || || |||| |||| ||||| ||| || ||| CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 525 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 |||||||| | | || ||||| ||||||||| ||||||| || |||| || || |||||| || TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 585 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 || || |||| |||||||||| |||||||||| || ||||||| | |||| ||| ||||||||| TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA 645 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT ACGACCCCAT 41426 |||||||| | | |||| ||| ||| || ||| ||||||| | ||||| ||| |||||||||| TCACCAGTAT GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT 705 ATACGTGCCA TCTTAGTGCC CCTCG 41451 |||||||||| ||||||| || ||||| ATACGTGCCA TCTTAGTTCC CCTCG 730 hqPGS_C08HBa0235H18.1+_SGN-E210719- (40947 41451) ******************************************************************************** EST sequence 503 -strand 712 n (File: SGN-E210726-) 1 TATTCCGGTT CTTTAAGTTT GTTACGAACT CTTATCAATA AAGTAAAAGT GAATATTTAA 61 AAAACTGAGC TATTAAGATT TTTCATTACG GTAGAGATCA GTTGACTAAT TGAGGCGATT 121 TAAAATGAAG AAACTCAAAT TCACTTGGCC ACTTCATCAG TACTTGCAGG CATCTCCAAG 181 GGGAAATTTG GATCAGCAAC ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA 241 CCAGGGCAAG TAAATGTGCT TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT 301 CTTTTCTTGA AAAATTTGGA CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT 361 TGTTGTCCTC CAAACGTGGT ACAAGGGTTG TTACATCCTC CAGGTACCTT AAGGGCGCGA 421 GGACATTCAC CATTTATATT GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT 481 TTTGTTGGGG CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA 541 TCTAAGTTGC TAAACTGGTC CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT 601 CCGGTACACT GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA 661 TTAAAGTTGC AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT CG Predicted gene structure (within gDNA segment 36971 to 42123): Exon 1 40947 41451 ( 505 n); cDNA 208 712 ( 505 n); score: 0.865 MATCH C08HBa0235H18.1+ SGN-E210726- 0.865 505 0.709 C PGS_C08HBa0235H18.1+_SGN-E210726- (40947 41451) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||||| |||| ||| ||| |||||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA 267 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 || ||||| | |||||||||| |||| || || |||| | |||||||| | || || | | TCGTCTTGTG GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT 327 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 ||||| |||| |||| ||||| || |||||| |||||||||| |||| ||||| |||||||||| GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 387 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 |||||||||| |||| ||||| | |||| | | ||| |||| |||| ||||| ||| |||||| TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 447 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 |||||||||| | || ||||| |||||||||| || || |||| |||| ||||| ||| || ||| CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 507 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 |||||||| | | || ||||| ||||||||| ||||||| || |||| || || |||||| || TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 567 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 || || |||| |||||||||| |||||||||| || ||||||| | |||| ||| ||||||||| TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA 627 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT ACGACCCCAT 41426 |||||||| | | |||| ||| ||| || ||| ||||||| | ||||| ||| |||||||||| TCACCAGTCT GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT 687 ATACGTGCCA TCTTAGTGCC CCTCG 41451 |||||||||| ||||||| || ||||| ATACGTGCCA TCTTAGTTCC CCTCG 712 hqPGS_C08HBa0235H18.1+_SGN-E210726- (40947 41451) ******************************************************************************** EST sequence 895 -strand 672 n (File: SGN-E268624-) 1 ATCAATAAAG TAAAAGTGAA TATTTAAAAA ACTGAGCTAT TAAGATTTTT CATTACGGTA 61 GAGATCAGTT GACTAATTGA GGCGATTTAA AATGAAGAAA CTCAAATTCA CTTGGCCACT 121 TCATCAGTAC TTGCAGGCAT CTCCAAGGGG AAATTTGGAT CAGCAACACC ATTAGGACAA 181 AAGACAACCC TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT 241 TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG 301 CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA 361 CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA 421 ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT 481 CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG 541 GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA 601 GTCTGACATG TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT 661 GCCATCTTAG TT Predicted gene structure (within gDNA segment 37301 to 42053): Exon 1 40947 41443 ( 497 n); cDNA 175 671 ( 497 n); score: 0.865 MATCH C08HBa0235H18.1+ SGN-E268624- 0.865 497 0.740 C PGS_C08HBa0235H18.1+_SGN-E268624- (40947 41443) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||||| |||| ||| ||| |||||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA 234 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 || ||||| | |||||||||| |||| || || |||| | |||||||| | || || | | TCGTCTTGTG GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT 294 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 ||||| |||| |||| ||||| || |||||| |||||||||| |||| ||||| |||||||||| GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 354 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 |||||||||| |||| ||||| | |||| | | ||| |||| |||| ||||| ||| |||||| TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 414 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 |||||||||| | || ||||| |||||||||| || || |||| |||| ||||| ||| || ||| CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 474 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 |||||||| | | || ||||| ||||||||| ||||||| || |||| || || |||||| || TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 534 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 || || |||| |||||||||| |||||||||| || ||||||| | |||| ||| ||||||||| TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA 594 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT ACGACCCCAT 41426 |||||||| | | |||| ||| ||| || ||| ||||||| | ||||| ||| |||||||||| TCACCAGTCT GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT 654 ATACGTGCCA TCTTAGT 41443 |||||||||| ||||||| ATACGTGCCA TCTTAGT 671 hqPGS_C08HBa0235H18.1+_SGN-E268624- (40947 41443) ******************************************************************************** EST sequence 560 -strand 722 n (File: SGN-E538599-) 1 AAGACAAAAG TACACATGAG ATGTAACTCT TATTCCGGTT CTTTAAGTTT GTTACGAACT 61 CTTATCAATA AAGTAAAAGT GAATATTTAA AAAACTGAGC TATTAAGATT TTTCATTACG 121 GTAGAGATCA GTTGACTAAT TGAGGCGATT TAAAATGAAG AAACTCAAAT TCACTTGGCC 181 ACTTCATCAG TACTTGCAGG CATCTCCAAG GGGAAATTTG GATCAGCAAC ACCATTAGGA 241 CAAAAGACAA CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT TGTAGGATCG 301 TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA CAACTCTGTA 361 GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT ACAAGGGTTG 421 TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT GGCCGTGCAA 481 TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT TGGAATATTA 541 AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGCGTAC 601 TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC ACCACAATCA 661 CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG ACCCCATATA 721 CG Predicted gene structure (within gDNA segment 39109 to 45729): Exon 1 40947 41431 ( 485 n); cDNA 238 722 ( 485 n); score: 0.862 MATCH C08HBa0235H18.1+ SGN-E538599- 0.862 485 0.672 C PGS_C08HBa0235H18.1+_SGN-E538599- (40947 41431) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||||| |||| ||| ||| |||||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA 297 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 || ||||| | |||||||||| |||| || || |||| | |||||||| | || || | | TCGTCTTGTG GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT 357 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 ||||| |||| |||| ||||| || |||||| |||||||||| |||| ||||| |||||||||| GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 417 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 |||||||||| |||| ||||| | |||| | | ||| |||| |||| ||||| ||| |||||| TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 477 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 |||||||||| | || ||||| |||||||||| || || |||| |||| ||||| ||| || ||| CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 537 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 |||||||| | | || ||||| ||||||||| ||||||| || |||| || || |||||| || TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 597 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 || || |||| |||||||||| |||||||||| || ||||||| | |||| ||| ||||||||| TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA 657 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT ACGACCCCAT 41426 |||||||| | | |||| ||| ||| || ||| ||||||| | ||||| ||| |||||||||| TCACCAGTCT GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT 717 ATACG 41431 ||||| ATACG 722 hqPGS_C08HBa0235H18.1+_SGN-E538599- (40947 41431) ******************************************************************************** EST sequence 74 +strand 781 n (File: SGN-E538598+) 1 TTTTTTTTTT TTTTTTTTTT TTTTTTTTTT TTTTTTTTTA ATTCAAATGC ACTGGTTGTT 61 TTATACATCT AAGACAAAAG TACACATGGA GATGTAACTC TTATTCCGGT CTTTAAGTTT 121 GTTACGAACT CTTATCAATA AAGTAAAAGT GAATATTTAA AAAACTGAGC TATTAAGATT 181 TTTCATTACG GGAGAGATCA GTTGACTAAT TGAGGCGATT TAAAATGAAG AAACTCAAAT 241 TCACTTGGCC ACTTCATCAG TACTTGCAGG CATCTCCAAG GGGAAATTTG GATCAGCAAC 301 ACCATTAGGA CAAAAGACAA CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT 361 TGTAGGATCG TCTTGGGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA 421 CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT 481 ACAAGGGTTG TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT 541 GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT 601 TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC 661 CAAGGCGTAC TCGGCTAGGG TGTTTTGGGG GTTTGCCCCA TCCGGTACAC TGTAAGACTC 721 CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG CAACCAGTAC 781 G Predicted gene structure (within gDNA segment 38419 to 45629): Exon 1 40947 41419 ( 473 n); cDNA 308 781 ( 474 n); score: 0.853 PPA cDNA 39 1 MATCH C08HBa0235H18.1+ SGN-E538598+ 0.853 473 0.606 C PGS_C08HBa0235H18.1+_SGN-E538598+ (40947 41419) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||||| |||| ||| ||| |||||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA 367 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 || ||||| | |||||||||| |||| || || |||| | |||||||| | || || | | TCGTCTTGGG GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT 427 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 ||||| |||| |||| ||||| || |||||| |||||||||| |||| ||||| |||||||||| GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 487 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 |||||||||| |||| ||||| | |||| | | ||| |||| |||| ||||| ||| |||||| TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 547 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 |||||||||| | || ||||| |||||||||| || || |||| |||| ||||| ||| || ||| CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 607 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 |||||||| | | || ||||| ||||||||| ||||||| || |||| || || |||||| || TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 667 TATTCAGCTA GGGTG-TTTG GGGGTTTGCC CCACCCGGTA CAGTGTAGGA CCCCACCACA 41365 || || |||| ||||| |||| |||||||||| ||| |||||| || |||| || | |||||||| TACTCGGCTA GGGTGTTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA 727 ATCACCAGTT TGGCATGAAC CTCTACCAGC ACCATTAAAA TTGCAATTAG TACG 41419 ||||||||| || |||| || |||| || || | ||||||| |||||| || |||| ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACG 781 hqPGS_C08HBa0235H18.1+_SGN-E538598+ (40947 41419) ******************************************************************************** EST sequence 920 -strand 736 n (File: SGN-E353136-) 1 TTTCAAATGC ACTGTTGTTT TATACATCTA AGACAAAAGT ACACATGAGA TGTAACTCTT 61 ATTCCGGTCT TTAAGTTTGT TACGAACTCT TATCAATAAA GTAAAAGTGA ATATTTAAAA 121 AACTGAGCTA TTAAGATTTT TCATTACGGT AGAGATCAGT TGACTAATTG AGGCGATTTA 181 AAATGAAGAA ACTCAAATTC ACTTGGCCAC TTCATCAGTA CTTGCAGGCA TCTCCAAGGG 241 GAAATTTGGA TCAGCAACAC CATTAGGACA AAAGACAACC CTATAGTTTG TACTACCACC 301 AGGGCAAGTA AATGTGCTTG TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT 361 TTTCTTGAAA AATTTGGACA ACTCTGTAGG GCCACATGGA CCTTGGGTGC AACAATATTG 421 TTGTCCTCCA AACGTGGTAC AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG 481 ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT 541 TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC 601 TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC 661 GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 721 AAAGTTGCAA CCAGTG Predicted gene structure (within gDNA segment 38829 to 45589): Exon 1 40947 41416 ( 470 n); cDNA 266 735 ( 470 n); score: 0.857 MATCH C08HBa0235H18.1+ SGN-E353136- 0.857 470 0.639 C PGS_C08HBa0235H18.1+_SGN-E353136- (40947 41416) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||||| |||| ||| ||| |||||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA 325 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 || ||||| | |||||||||| |||| || || |||| | |||||||| | || || | | TCGTCTTGTG GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT 385 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 ||||| |||| |||| ||||| || |||||| |||||||||| |||| ||||| |||||||||| GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 445 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 |||||||||| |||| ||||| | |||| | | ||| |||| |||| ||||| ||| |||||| TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 505 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 |||||||||| | || ||||| |||||||||| || || |||| |||| ||||| ||| || ||| CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 565 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 |||||||| | | || ||||| ||||||||| ||||||| || |||| || || |||||| || TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 625 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 || || |||| |||||||||| |||||||||| || ||||||| | |||| ||| ||||||||| TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA 685 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT 41416 |||||||| | | |||| ||| ||| || ||| ||||||| | ||||| ||| TCACCAGTCT GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT 735 hqPGS_C08HBa0235H18.1+_SGN-E353136- (40947 41416) ******************************************************************************** EST sequence 1088 -strand 579 n (File: SGN-E396772-) 1 AAAGGGAATA TTAAAAAAAC TGAGCTATTA AGATTTTTCA TTACGGTAGA GATCAGTTGA 61 CTAATTGAGG CGATTTAAAA TGAAGAAACT CAAATTCACT TGGCCACTTC ATCAGTACTT 121 GCAGGCATCT CCAAGGGGAA ATTTGGATCA GCAACACCAT TAGGACAAAA GACAACCCTA 181 TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA 241 TAAGCATCGG GACATATTTT CTTGAAAAAT TTGGACAACT ATGTAGGGCC ACATGGACCT 301 TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGCCGTTACA TCCTCCCGGT 361 ACCCTATGGG CGCGCGGACA TTCACCATTT ATATCGGCCG TGCAATGAAT TGCGTGACAT 421 TTTCCTCCAA TAGGTTATGA CGGGGCAAAA GTCAATGGAT TATCAAATCC ATCGCCTGAA 481 GAAATCTTCC TCAAATTTAA GTTGATAAAT TGGTGCAAGG GGTATTCGGC TACGGTGTAA 541 GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCA Predicted gene structure (within gDNA segment 39859 to 46399): Exon 1 40947 41363 ( 417 n); cDNA 163 579 ( 417 n); score: 0.808 MATCH C08HBa0235H18.1+ SGN-E396772- 0.808 417 0.720 C PGS_C08HBa0235H18.1+_SGN-E396772- (40947 41363) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||||| |||| ||| ||| |||||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA 222 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 || ||||| | |||||||||| |||| || || ||| | |||||||| | || || | | TCGTCTTGTG GGTAGCTATA AGCATCGGGA CATATTTTCT TGAAAAATTT GGACAACTAT 282 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 ||||| |||| |||| ||||| || |||||| |||||||||| |||| ||||| |||||||||| GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 342 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 |||||||| |||| ||||| |||| | | | || |||| |||| ||||| || |||||| CCGTTACATC CTCCCGGTAC CCTATGGGCG CGCGGACATT CACCATTTAT ATCGGCCGTG 402 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 |||||||||| | || ||||| ||||||| || || | | | |||| ||||| || || || CAATGAATTG CGTGACATTT TCCTCCAATA GGTTATGACG GGGCAAAAGT CAATGGATTA 462 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 | |||||| | | | |||| ||| | || |||| || || || | ||||| || ||| | TCAAATCCAT CGCCTGAAGA AATCTTCCTC AAATTTAAGT TGATAAATTG GTGCAAGGGG 522 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCA 41363 ||||| |||| ||||| || |||||||||| || ||||||| | |||| ||| |||||| TATTCGGCTA CGGTGTAAGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCA 579 hqPGS_C08HBa0235H18.1+_SGN-E396772- (40947 41363) ******************************************************************************** EST sequence 1086 -strand 536 n (File: SGN-E398465-) 1 ACGGTAGAGA TCAGTTGACT AATTGAGGTG ATTTAAAATG AAGAAACTCA AATTCACTTC 61 GCCACTTCAT CAGTACTTGC AGGCATCTCC AAGGGGAAAT CAGGATCAGC AACACCAGTA 121 GGACAAAAGA CAACCCTATA GTTAGTACTA CCACCAGGGC AAGTAAATGC GCCTGTAGGA 181 TAGTATTGTG GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTAT 241 GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTCTTGTC CTCCAAACGT GGTACAAGGG 301 CCGGTACATC CTCCAGGTAC CCTAAGGGCG AGAGGACATT CACCACTTAT ATTGGCCGTG 361 CAATGAATCG CGTGACATTT TCCTCCAATA GGTTTTGACG GGGCAAAAGT CATTGGAATA 421 TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATTTAAGT TGCTAAACTG GTCCAAGGCG 481 TATTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACC Predicted gene structure (within gDNA segment 40279 to 45039): Exon 1 40947 41362 ( 416 n); cDNA 121 536 ( 416 n); score: 0.829 MATCH C08HBa0235H18.1+ SGN-E398465- 0.829 416 0.776 C PGS_C08HBa0235H18.1+_SGN-E398465- (40947 41362) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| || |||||| |||| ||||| |||| ||| || |||||| GGACAAAAGA CAACCCTATA GTTAGTACTA CCACCAGGGC AAGTAAATGC GCCTGTAGGA 180 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 | | ||| | |||||||||| |||| || || |||| | |||||||| | || || | | TAGTATTGTG GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTAT 240 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 ||||| |||| |||| ||||| || |||||| |||| ||||| |||| ||||| |||||||||| GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTCTTGTC CTCCAAACGT GGTACAAGGG 300 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 | |||||| |||| ||||| |||||| | ||| |||| |||| |||| ||| |||||| CCGGTACATC CTCCAGGTAC CCTAAGGGCG AGAGGACATT CACCACTTAT ATTGGCCGTG 360 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 |||||||| | | || ||||| ||||||| || || || | | |||| ||||| ||| || ||| CAATGAATCG CGTGACATTT TCCTCCAATA GGTTTTGACG GGGCAAAAGT CATTGGAATA 420 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 |||||||| | | || ||||| ||||||||| |||| || || |||| || || |||||| || TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATTTAAGT TGCTAAACTG GTCCAAGGCG 480 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACC 41362 ||||| |||| |||||||||| |||||||||| || ||||||| | |||| ||| ||||| TATTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACC 536 hqPGS_C08HBa0235H18.1+_SGN-E398465- (40947 41362) ******************************************************************************** EST sequence 1184 -strand 679 n (File: SGN-E357805-) 1 TTTTTTTTTC AAATGCACTG TGTTTTATAC ATCTAAGACA AAAGTACACA TGAGATGTAC 61 TCTTTATTCC GGTCTTTAAG TTTGTTACGA CTTCTTATCA ATAAAGTAAA AGTGAATATT 121 TAAAAAACTG AGCTATTAAG ATTTTTCATT ACGGTAGAGA TCAGTTGACT AATTGAGGCG 181 ATTTAAAATG AAGAAACTCA AATTCACTTG GCCACTTCAT CAGTACTTGC AGGCATCTCC 241 AAGGGGAAAT TTGGATCAGC AACACCATTA GGACAAAAGA CAACCCTATA GTTTGTACTA 301 CCACCAGGGC AAGTAAATGT GCTTGTAGGA TCGTCTTGTG GGTAGCTATA AGCATCGGGA 361 CATCTTTTCT TGAAAAATTT GGACAACTCT GTAGGGCCAC ATGGACCTTG GGTGCAACAA 421 TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 481 CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 541 GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 601 AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 661 CATCCGGTAC ACTGTAAGA Predicted gene structure (within gDNA segment 38779 to 44969): Exon 1 40947 41355 ( 409 n); cDNA 271 679 ( 409 n); score: 0.861 MATCH C08HBa0235H18.1+ SGN-E357805- 0.861 409 0.602 C PGS_C08HBa0235H18.1+_SGN-E357805- (40947 41355) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||||| |||| ||| ||| |||||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA 330 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 || ||||| | |||||||||| |||| || || |||| | |||||||| | || || | | TCGTCTTGTG GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT 390 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 ||||| |||| |||| ||||| || |||||| |||||||||| |||| ||||| |||||||||| GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 450 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 |||||||||| |||| ||||| | |||| | | ||| |||| |||| ||||| ||| |||||| TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 510 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 |||||||||| | || ||||| |||||||||| || || |||| |||| ||||| ||| || ||| CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 570 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 |||||||| | | || ||||| ||||||||| ||||||| || |||| || || |||||| || TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 630 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGA 41355 || || |||| |||||||||| |||||||||| || ||||||| | |||| || TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGA 679 hqPGS_C08HBa0235H18.1+_SGN-E357805- (40947 41355) ******************************************************************************** EST sequence 924 -strand 558 n (File: SGN-E206119-) 1 AAAAGTGAAT ATTTAAAAAA CTGAGCTATT AAGATTTTTC ATTACGGTAG AGATCAGTTG 61 ACTAATTGAG GCGATTTAAA ATGAAGAAAC TCAAATTCAC TTGGCCACTT CATCAGTACT 121 TCAGGCATTC TCCAAGGGGA AATTTGGATC AGCAACACCA TTAGGACAAA AGACAACCCT 181 ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT 241 ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 301 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 361 TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 421 TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 481 AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 541 TGGGGGTTTG CCCCATCC Predicted gene structure (within gDNA segment 39849 to 44829): Exon 1 40947 41341 ( 395 n); cDNA 164 558 ( 395 n); score: 0.861 MATCH C08HBa0235H18.1+ SGN-E206119- 0.861 395 0.708 C PGS_C08HBa0235H18.1+_SGN-E206119- (40947 41341) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||||| |||| ||| ||| |||||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA 223 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 || ||||| | |||||||||| |||| || || |||| | |||||||| | || || | | TCGTCTTGTG GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT 283 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 ||||| |||| |||| ||||| || |||||| |||||||||| |||| ||||| |||||||||| GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 343 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 |||||||||| |||| ||||| | |||| | | ||| |||| |||| ||||| ||| |||||| TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 403 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 |||||||||| | || ||||| |||||||||| || || |||| |||| ||||| ||| || ||| CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 463 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 |||||||| | | || ||||| ||||||||| ||||||| || |||| || || |||||| || TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 523 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCC 41341 || || |||| |||||||||| |||||||||| || || TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCC 558 hqPGS_C08HBa0235H18.1+_SGN-E206119- (40947 41341) ******************************************************************************** EST sequence 1144 -strand 620 n (File: SGN-E357453-) 1 TTTTTTTTTT TTTGAGATGT AACTCTTATT CCGGTCTTTA AGTTTGTTAC GAACTCTTAT 61 CAATAAAGTA AAAGTGAATA TTTAAAAAAC TGAGCTATTA AGATTTTTCA TTACGGTAGA 121 GATCAGTTGA CTAATTGAGG CGATTTAAAA TGAAGAAACT CAAATTCACT TGGCCACTTC 181 ATCAGTACTT GCAGGCATCT CCAAGGGGAA ATTTGGATCA GCAACACCAT TAGGACAAAA 241 GACAACCCTA TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG 301 TGGGTAGCTA TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC 361 ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 421 TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 481 TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 541 ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 601 TAGGGTGTTT GGGGGTTTGC Predicted gene structure (within gDNA segment 39159 to 44759): Exon 1 40947 41334 ( 388 n); cDNA 233 620 ( 388 n); score: 0.861 PPA cDNA 13 1 MATCH C08HBa0235H18.1+ SGN-E357453- 0.861 388 0.626 C PGS_C08HBa0235H18.1+_SGN-E357453- (40947 41334) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||||| |||| ||| ||| |||||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA 292 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 || ||||| | |||||||||| |||| || || |||| | |||||||| | || || | | TCGTCTTGTG GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT 352 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 ||||| |||| |||| ||||| || |||||| |||||||||| |||| ||||| |||||||||| GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 412 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 |||||||||| |||| ||||| | |||| | | ||| |||| |||| ||||| ||| |||||| TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 472 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 |||||||||| | || ||||| |||||||||| || || |||| |||| ||||| ||| || ||| CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 532 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 |||||||| | | || ||||| ||||||||| ||||||| || |||| || || |||||| || TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 592 TATTCAGCTA GGGTGTTTGG GGGTTTGC 41334 || || |||| |||||||||| |||||||| TACTCGGCTA GGGTGTTTGG GGGTTTGC 620 hqPGS_C08HBa0235H18.1+_SGN-E357453- (40947 41334) ******************************************************************************** EST sequence 817 -strand 615 n (File: SGN-E353799-) 1 TTTTTTTTTT TCACATGAGA TGTAACTCTT ATTCCGGTCT TTAAGTTTGT TACGAACTCT 61 TATCAATAAA GTAAAAGTGA ATATTTAAAA AACTGAGCTA TTAAGATTTT TCATTACGGT 121 AGAGATCAGT TGACTAATTG AGGCGATTTA AAATGAAGAA ACTCAAATTC ACTTGGCCAC 181 TTCATCAGTA CTTGCAGGCA TCTCCAAGGG GAAATTTGGA TCAGCAACAC CATTAGGACA 241 AAAGACAACC CTATAGTTTG TACTACCACC AGGGCAAGTA AATGTGCTTG TAGGATCGTC 301 TTGTGGGTAG CTATAAGCAT CGGGACATCT TTTCTTGAAA AATTTGGACA ACTCTGTAGG 361 GCCACATGGA CCTTGGGTGC AACAATATTG TTGTCCTCCA AACGTGGTAC AAGGGTTGTT 421 ACATCCTCCA GGTACCTTAA GGGCGCGAGG ACATTCACCA TTTATATTGG CCGTGCAATG 481 AATTGCGTGA CATTTTCCTC CACTAGGTTT TGTTGGGGCA AAAGTCATTG GAATATTAAA 541 TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA AACTGGTCCA AGGCGTACTC 601 GGCTAGGGTG TTTGG Predicted gene structure (within gDNA segment 39129 to 44679): Exon 1 40947 41326 ( 380 n); cDNA 236 615 ( 380 n); score: 0.858 PPA cDNA 11 1 MATCH C08HBa0235H18.1+ SGN-E353799- 0.858 380 0.618 C PGS_C08HBa0235H18.1+_SGN-E353799- (40947 41326) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||||| |||| ||| ||| |||||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA 295 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 || ||||| | |||||||||| |||| || || |||| | |||||||| | || || | | TCGTCTTGTG GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT 355 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 ||||| |||| |||| ||||| || |||||| |||||||||| |||| ||||| |||||||||| GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 415 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 |||||||||| |||| ||||| | |||| | | ||| |||| |||| ||||| ||| |||||| TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 475 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 |||||||||| | || ||||| |||||||||| || || |||| |||| ||||| ||| || ||| CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 535 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 |||||||| | | || ||||| ||||||||| ||||||| || |||| || || |||||| || TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 595 TATTCAGCTA GGGTGTTTGG 41326 || || |||| |||||||||| TACTCGGCTA GGGTGTTTGG 615 hqPGS_C08HBa0235H18.1+_SGN-E353799- (40947 41326) ******************************************************************************** EST sequence 249 +strand 665 n (File: SGN-E390304+) 1 TTTTTTTTTT TTTTTTTTTT TTTTTTTTTT CCAAATGCAC TGTTGTTTTA TACATCTAAA 61 ACAAAAGTAC ACATGAAATG TAACTCTTAT TCCGGTCTTT AAGTTTGTTA CAAACTCTTA 121 TCAATAAAGT AAAAGTGAAT ATTTAAAAAA CTGAGCTATT AAAATTTTTC ATTACGGTAA 181 AAATCAGTTG ACTAATTGAG GCAATTTAAA ATGAAAAAAC TCAAATTCAC TTGGCCACTT 241 CATCAGTACT TGCAGGCATC TCCAAGGGGA AATTTGGATC ACCAACCCCA TTAGGACAAA 301 AAACAACCCT ATATTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT 361 GGGGGTAGCT ATAACCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC 421 CACATGGACC TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAG GGGTTGTTAC 481 ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA 541 TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCTTTGAA ATATTAAATC 601 CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG 661 CTAGG Predicted gene structure (within gDNA segment 38559 to 44609): Exon 1 40947 41318 ( 372 n); cDNA 294 665 ( 372 n); score: 0.847 PPA cDNA 30 1 MATCH C08HBa0235H18.1+ SGN-E390304+ 0.847 372 0.559 C PGS_C08HBa0235H18.1+_SGN-E390304+ (40947 41318) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||||| |||||||||| ||||||||| |||| ||||| |||| ||| ||| |||||| GGACAAAAAA CAACCCTATA TTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA 353 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 || ||||| | |||||||||| ||| || || |||| | |||||||| | || || | | TCGTCTTGGG GGTAGCTATA ACCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT 413 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 ||||| |||| |||| ||||| || |||||| |||||||||| |||| ||||| |||||| ||| GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAGGGG 473 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 |||||||||| |||| ||||| | |||| | | ||| |||| |||| ||||| ||| |||||| TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 533 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 |||||||||| | || ||||| |||||||||| || || |||| |||| ||||| | | | ||| CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CTTTGAAATA 593 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 |||||||| | | || ||||| ||||||||| ||||||| || |||| || || |||||| || TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 653 TATTCAGCTA GG 41318 || || |||| || TACTCGGCTA GG 665 hqPGS_C08HBa0235H18.1+_SGN-E390304+ (40947 41318) ******************************************************************************** EST sequence 515 -strand 503 n (File: SGN-E350782-) 1 TTTTTTTTTT TTTTTTTTGA GCTATTAAGA TTTTTCATTA CGGTAGAGAT CAGTTGACTA 61 ATTGAGGCGA TTTAAAATGA AGAAACTCAA ATTCACTTGG CCACTTCATC AGTACTTGCA 121 GGCATCTCCA AGGGGAAATT TGGATCAGCA ACACCATTAG GACAAAAGAC AACCCTATAG 181 TTTGTACTAC CACCAGGGCA AGTAAATGTG CTTGTAGGAT CGTCTTGTGG GTAGCTATAA 241 GCATCGGGAC ATCTTTTCTT GAAAAATTTG GACAACTCTG TAGGGCCACA TGGACCTTGG 301 GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC 361 TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT 421 CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 481 ATGTCCCAAA AATCTAAGTT GCT Predicted gene structure (within gDNA segment 39289 to 44319): Exon 1 40947 41290 ( 344 n); cDNA 160 503 ( 344 n); score: 0.860 PPA cDNA 18 1 MATCH C08HBa0235H18.1+ SGN-E350782- 0.860 344 0.684 C PGS_C08HBa0235H18.1+_SGN-E350782- (40947 41290) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||||| |||| ||| ||| |||||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA 219 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 || ||||| | |||||||||| |||| || || |||| | |||||||| | || || | | TCGTCTTGTG GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT 279 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 ||||| |||| |||| ||||| || |||||| |||||||||| |||| ||||| |||||||||| GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 339 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 |||||||||| |||| ||||| | |||| | | ||| |||| |||| ||||| ||| |||||| TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 399 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 |||||||||| | || ||||| |||||||||| || || |||| |||| ||||| ||| || ||| CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 459 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCT 41290 |||||||| | | || ||||| ||||||||| ||||||| || |||| TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCT 503 hqPGS_C08HBa0235H18.1+_SGN-E350782- (40947 41290) ******************************************************************************** EST sequence 218 +strand 654 n (File: SGN-E375346+) 1 TTTTTTTTTT TTTTTTTTTT TTTTTTTTTT TTTTTTTTTA AAAAAAAAAA AAACGAAAAT 61 TCAAATGCAC TGTTGTTTTA TACATTTAAA ACAAAAGTCC ACATGAAATG TAACTTTTAT 121 TCCGGTCTTT AAGTTTGTTA CAAACTTTTA TCAATAAAGT AAAAGGGAAT ATTTAAAAAA 181 CTGAGCTATT AAAATTTTTC ATTACGGTAA AAATCAGTTG ACTAATTGAG GGGATTTAAA 241 ATGAAAAAAC TCAAATTCAC TTGGCCACTT CATCAGTACT TGCAGGCATT TCCAAGGGGA 301 AATTTGGATC AGCAACCCCT TTAGGACAAA AGACACCCCT ATAGTTTGTA CTACCACCAG 361 GGCAAGTAAA TGTGCTTGTA GGATCGTTTT GGGGGTAGCT ATAAGCATCG GGACATTTTT 421 TTTTGAAAAA TTTGGACAAC TTTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT 481 GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC 541 ATTCACCATT TATATTGGCC GGGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG 601 TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAA Predicted gene structure (within gDNA segment 38259 to 44199): Exon 1 40947 41275 ( 329 n); cDNA 324 652 ( 329 n); score: 0.854 PPA cDNA 39 1 MATCH C08HBa0235H18.1+ SGN-E375346+ 0.854 329 0.503 C PGS_C08HBa0235H18.1+_SGN-E375346+ (40947 41275) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | || ||||||| ||||||||| |||| ||||| |||| ||| ||| |||||| GGACAAAAGA CACCCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA 383 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 || | ||| | |||||||||| |||| || || ||| || |||||||| | || || ||| TCGTTTTGGG GGTAGCTATA AGCATCGGGA CATTTTTTTT TGAAAAATTT GGACAACTTT 443 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 ||||| |||| |||| ||||| || |||||| |||||||||| |||| ||||| |||||||||| GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 503 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 |||||||||| |||| ||||| | |||| | | ||| |||| |||| ||||| ||| |||| | TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGGG 563 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 |||||||||| | || ||||| |||||||||| || || |||| |||| ||||| ||| || ||| CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 623 TTAAATCCGT CAACCAAAGA AATGTCCCA 41275 |||||||| | | || ||||| ||||||||| TTAAATCCAT CGACTAAAGA AATGTCCCA 652 hqPGS_C08HBa0235H18.1+_SGN-E375346+ (40947 41275) ******************************************************************************** EST sequence 863 -strand 555 n (File: SGN-E214114-) 1 TTTTTTTTTT TTTTTTCAAA TGCACTGTTG TTTTATACAT CTAAGACAAA AGTACACATG 61 AGATGTAACT CTTATTCCGG TCTTTAAGTT TGTTACGAAC TCTTATCAAT AAAGTAAAAG 121 TGAATATTTA AAAAACTGAG CTATTAAGAT TTTTCATTAC GGTAGAGATC AGTTGACTAA 181 TTGAGGCGAT TTAAAATGAA GAAACTCAAA TTCACTTGGC CACTTCATCA GTACTTGCAG 241 GCATCTCCAA GGGGAAATTT GGATCAGCAA CACCATTAGG ACAAAAGACA ACCCTATAGT 301 TTGTACTACC ACCAGGGCAA GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG 361 CATCGGGACA TCTTTTCTTG AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG 421 TGCAACAATA TTGTTGTCCT CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT 481 TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC 541 CTCCACTAGG TTTTG Predicted gene structure (within gDNA segment 38699 to 44999): Exon 1 40947 41221 ( 275 n); cDNA 279 553 ( 275 n); score: 0.858 PPA cDNA 16 1 MATCH C08HBa0235H18.1+ SGN-E214114- 0.858 275 0.495 C PGS_C08HBa0235H18.1+_SGN-E214114- (40947 41221) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCCTATA ATTTGTACTA CCACTAGGGC AAGTGAATAA GCTAGTAGGA 41006 || ||||| | |||||||||| ||||||||| |||| ||||| |||| ||| ||| |||||| GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA 338 TCATCTTGAG GGTAGCTATA CGCATTAGGG CACCTTTGTT TGAAAAATCT CGAAAATTTT 41066 || ||||| | |||||||||| |||| || || |||| | |||||||| | || || | | TCGTCTTGTG GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT 398 GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 ||||| |||| |||| ||||| || |||||| |||||||||| |||| ||||| |||||||||| GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 458 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 |||||||||| |||| ||||| | |||| | | ||| |||| |||| ||||| ||| |||||| TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 518 CAATGAATTG CATGGCATTT TCCTCCACTA GGATT 41221 |||||||||| | || ||||| |||||||||| || || CAATGAATTG CGTGACATTT TCCTCCACTA GGTTT 553 hqPGS_C08HBa0235H18.1+_SGN-E214114- (40947 41221) ******************************************************************************** EST sequence 594 -strand 704 n (File: SGN-E212978-) 1 GAAATTTGAT CAGCAACACC ATTAGGACAA AAGACAACCC TATAGTTTGA CTACCACCAG 61 GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT ATAAGCATCG GGACATCTTT 121 TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT 181 GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC 241 ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG 301 TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA 361 AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG 421 TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA 481 AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA 541 CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA 601 CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA 661 GAAGGAAGAA GAGAACAAAA GAAGATGTCA AGTAGCCCAT GTTT Predicted gene structure (within gDNA segment 38811 to 43316): Exon 1 40950 41627 ( 678 n); cDNA 28 704 ( 677 n); score: 0.879 MATCH C08HBa0235H18.1+ SGN-E212978- 0.879 678 0.963 C PGS_C08HBa0235H18.1+_SGN-E212978- (40950 41627) Alignment (genomic DNA sequence = upper lines): CAAAAAACAA CCCTATAATT TGTACTACCA CTAGGGCAAG TGAATAAGCT AGTAGGATCA 41009 ||||| |||| ||||||| || || ||||||| | |||||||| | ||| ||| |||||||| CAAAAGACAA CCCTATAGTT TG-ACTACCA CCAGGGCAAG TAAATGTGCT TGTAGGATCG 86 TCTTGAGGGT AGCTATACGC ATTAGGGCAC CTTTGTTTGA AAAATCTCGA AAATTTTGTA 41069 ||||| |||| ||||||| || || || || |||| |||| ||||| | || || | |||| TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA CAACTCTGTA 146 GGACCACATG GGCCTTGAGT ACAACAATAT TGTTGTCCTC CGAACGTGGT ACAAGGGTTG 41129 || ||||||| | ||||| || ||||||||| |||||||||| | |||||||| |||||||||| GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT ACAAGGGTTG 206 TTACATCCTC CGGGTACCCT AAGTGGACTA GGGCATTCAC CGTTTATATT AGCCGTGCAA 41189 |||||||||| | |||||| | ||| | | | || ||||||| | |||||||| ||||||||| TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT GGCCGTGCAA 266 TGAATTGCAT GGCATTTTCC TCCACTAGGA TTGGTTGGGG CGAAAGTCAT CGGTATATTA 41249 |||||||| | | |||||||| ||||||||| || ||||||| | |||||||| || |||||| TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT TGGAATATTA 326 AATCCGTCAA CCAAAGAAAT GTCCCAGAAA TCTAGGTTGC TGAATTGGTC CAAAGCATAT 41309 ||||| || | | |||||||| |||||| ||| |||| ||||| | || ||||| ||| || || AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGCGTAC 386 TCAGCTAGGG TGTTTGGGGG TTTGCCCCAC CCGGTACAGT GTAGGACCCC ACCACAATCA 41369 || ||||||| |||||||||| ||||||||| |||||||| | ||| ||| || |||||||||| TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC ACCACAATCA 446 CCAGTTTGGC ATGAACCTCT ACCAGCACCA TTAAAATTGC AATTAGTACG ACCCCATATA 41429 ||||| || | ||| |||||| || ||| || ||||| |||| || |||||| |||||||||| CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG ACCCCATATA 506 CGTGCCATCT TAGTGCCCCT CGGCGCATTG ATGACCCATG TTTGGCCTCG ATCGAGACGT 41489 |||||||||| |||| ||||| ||| |||||| |||||||||| |||||||||| || ||||||| CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG TTTGGCCTCG ATTGAGACGT 566 CGACCACCGC CTATCGGGGT CGATGCTGCC CAAACGGTGT AGGGACAATT GTTGCGTACC 41549 |||||||||| ||||||| || |||||| ||| |||||||||| | ||||| || |||||||||| CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT ATGGACAGTT GTTGCGTACC 626 TCGATAGTGG CAGCATAAGT GTAAGTCACT AAAGCAAGGA AGAAGAAAAT AAAAGAAGAT 41609 || ||||||| |||||||||| |||||||| || ||||| |||||| || |||||||||| TCAATAGTGG CAGCATAAGT ATAAGTCACA CAAAGAAGGA AGAAGAGAAC AAAAGAAGAT 686 GTCAAGTAGC CCATGTTT 41627 |||||||||| |||||||| GTCAAGTAGC CCATGTTT 704 hqPGS_C08HBa0235H18.1+_SGN-E212978- (40950 41627) ******************************************************************************** EST sequence 521 -strand 719 n (File: SGN-E210966-) 1 CATCAGTACT GCAGGGCATC TCCAAGGGAA ATTTGGATCA GCACNACCAT TAGGACAAAA 61 GACAACCCTA TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG 121 TGGGTAGCTA TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC 181 ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 241 TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 301 TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 361 ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 421 TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 481 CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC 541 CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 601 ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT 661 AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATGTCA Predicted gene structure (within gDNA segment 38521 to 43176): Exon 1 40950 41613 ( 664 n); cDNA 56 719 ( 664 n); score: 0.878 MATCH C08HBa0235H18.1+ SGN-E210966- 0.878 664 0.924 C PGS_C08HBa0235H18.1+_SGN-E210966- (40950 41613) Alignment (genomic DNA sequence = upper lines): CAAAAAACAA CCCTATAATT TGTACTACCA CTAGGGCAAG TGAATAAGCT AGTAGGATCA 41009 ||||| |||| ||||||| || |||||||||| | |||||||| | ||| ||| |||||||| CAAAAGACAA CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT TGTAGGATCG 115 TCTTGAGGGT AGCTATACGC ATTAGGGCAC CTTTGTTTGA AAAATCTCGA AAATTTTGTA 41069 ||||| |||| ||||||| || || || || |||| |||| ||||| | || || | |||| TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA CAACTCTGTA 175 GGACCACATG GGCCTTGAGT ACAACAATAT TGTTGTCCTC CGAACGTGGT ACAAGGGTTG 41129 || ||||||| | ||||| || ||||||||| |||||||||| | |||||||| |||||||||| GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT ACAAGGGTTG 235 TTACATCCTC CGGGTACCCT AAGTGGACTA GGGCATTCAC CGTTTATATT AGCCGTGCAA 41189 |||||||||| | |||||| | ||| | | | || ||||||| | |||||||| ||||||||| TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT GGCCGTGCAA 295 TGAATTGCAT GGCATTTTCC TCCACTAGGA TTGGTTGGGG CGAAAGTCAT CGGTATATTA 41249 |||||||| | | |||||||| ||||||||| || ||||||| | |||||||| || |||||| TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT TGGAATATTA 355 AATCCGTCAA CCAAAGAAAT GTCCCAGAAA TCTAGGTTGC TGAATTGGTC CAAAGCATAT 41309 ||||| || | | |||||||| |||||| ||| |||| ||||| | || ||||| ||| || || AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGCGTAC 415 TCAGCTAGGG TGTTTGGGGG TTTGCCCCAC CCGGTACAGT GTAGGACCCC ACCACAATCA 41369 || ||||||| |||||||||| ||||||||| |||||||| | ||| ||| || |||||||||| TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC ACCACAATCA 475 CCAGTTTGGC ATGAACCTCT ACCAGCACCA TTAAAATTGC AATTAGTACG ACCCCATATA 41429 ||||| || | ||| |||||| || ||| || ||||| |||| || |||||| |||||||||| CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG ACCCCATATA 535 CGTGCCATCT TAGTGCCCCT CGGCGCATTG ATGACCCATG TTTGGCCTCG ATCGAGACGT 41489 |||||||||| |||| ||||| ||| |||||| |||||||||| |||||||||| || ||||||| CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG TTTGGCCTCG ATTGAGACGT 595 CGACCACCGC CTATCGGGGT CGATGCTGCC CAAACGGTGT AGGGACAATT GTTGCGTACC 41549 |||||||||| ||||||| || |||||| ||| |||||||||| | ||||| || |||||||||| CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT ATGGACAGTT GTTGCGTACC 655 TCGATAGTGG CAGCATAAGT GTAAGTCACT AAAGCAAGGA AGAAGAAAAT AAAAGAAGAT 41609 || ||||||| |||||||||| |||||||| || ||||| |||||| || |||||||||| TCAATAGTGG CAGCATAAGT ATAAGTCACA CAAAGAAGGA AGAAGAGAAC AAAAGAAGAT 715 GTCA 41613 |||| GTCA 719 hqPGS_C08HBa0235H18.1+_SGN-E210966- (40950 41613) ******************************************************************************** EST sequence 703 -strand 703 n (File: SGN-E213606-) 1 ATTTCCAAGG GGAAATTTGG ATCAGCAACA CCATTAGGAC AAAAGACAAC CCTATAGTTT 61 GTACTACCAC CAGGGCAAGT AAATGTGCTT GTAGGATCGT CTTGTGGGTA GCTATAAGCA 121 TCGGGACATC TTTTCTTGAA AAATTTGGAC AACTCTGTAG GGCCACATGG ACCTTGGGTG 181 CAACAATATT GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA 241 AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 301 CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 361 TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT 421 TTGCCCCATC CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG 481 CCTGCAGCAT TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC 541 GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC 601 GATGCCGCCC AAACGGTGTA TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA 661 TAAGTCACAC AAAGAAGGAA GAAGAGAACA AAAGAAGATG TCA Predicted gene structure (within gDNA segment 38681 to 43176): Exon 1 40950 41613 ( 664 n); cDNA 40 703 ( 664 n); score: 0.878 MATCH C08HBa0235H18.1+ SGN-E213606- 0.878 664 0.945 C PGS_C08HBa0235H18.1+_SGN-E213606- (40950 41613) Alignment (genomic DNA sequence = upper lines): CAAAAAACAA CCCTATAATT TGTACTACCA CTAGGGCAAG TGAATAAGCT AGTAGGATCA 41009 ||||| |||| ||||||| || |||||||||| | |||||||| | ||| ||| |||||||| CAAAAGACAA CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT TGTAGGATCG 99 TCTTGAGGGT AGCTATACGC ATTAGGGCAC CTTTGTTTGA AAAATCTCGA AAATTTTGTA 41069 ||||| |||| ||||||| || || || || |||| |||| ||||| | || || | |||| TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA CAACTCTGTA 159 GGACCACATG GGCCTTGAGT ACAACAATAT TGTTGTCCTC CGAACGTGGT ACAAGGGTTG 41129 || ||||||| | ||||| || ||||||||| |||||||||| | |||||||| |||||||||| GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT ACAAGGGTTG 219 TTACATCCTC CGGGTACCCT AAGTGGACTA GGGCATTCAC CGTTTATATT AGCCGTGCAA 41189 |||||||||| | |||||| | ||| | | | || ||||||| | |||||||| ||||||||| TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT GGCCGTGCAA 279 TGAATTGCAT GGCATTTTCC TCCACTAGGA TTGGTTGGGG CGAAAGTCAT CGGTATATTA 41249 |||||||| | | |||||||| ||||||||| || ||||||| | |||||||| || |||||| TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT TGGAATATTA 339 AATCCGTCAA CCAAAGAAAT GTCCCAGAAA TCTAGGTTGC TGAATTGGTC CAAAGCATAT 41309 ||||| || | | |||||||| |||||| ||| |||| ||||| | || ||||| ||| || || AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGCGTAC 399 TCAGCTAGGG TGTTTGGGGG TTTGCCCCAC CCGGTACAGT GTAGGACCCC ACCACAATCA 41369 || ||||||| |||||||||| ||||||||| |||||||| | ||| ||| || |||||||||| TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC ACCACAATCA 459 CCAGTTTGGC ATGAACCTCT ACCAGCACCA TTAAAATTGC AATTAGTACG ACCCCATATA 41429 ||||| || | ||| |||||| || ||| || ||||| |||| || |||||| |||||||||| CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG ACCCCATATA 519 CGTGCCATCT TAGTGCCCCT CGGCGCATTG ATGACCCATG TTTGGCCTCG ATCGAGACGT 41489 |||||||||| |||| ||||| ||| |||||| |||||||||| |||||||||| || ||||||| CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG TTTGGCCTCG ATTGAGACGT 579 CGACCACCGC CTATCGGGGT CGATGCTGCC CAAACGGTGT AGGGACAATT GTTGCGTACC 41549 |||||||||| ||||||| || |||||| ||| |||||||||| | ||||| || |||||||||| CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT ATGGACAGTT GTTGCGTACC 639 TCGATAGTGG CAGCATAAGT GTAAGTCACT AAAGCAAGGA AGAAGAAAAT AAAAGAAGAT 41609 || ||||||| |||||||||| |||||||| || ||||| |||||| || |||||||||| TCAATAGTGG CAGCATAAGT ATAAGTCACA CAAAGAAGGA AGAAGAGAAC AAAAGAAGAT 699 GTCA 41613 |||| GTCA 703 hqPGS_C08HBa0235H18.1+_SGN-E213606- (40950 41613) ******************************************************************************** EST sequence 535 -strand 710 n (File: SGN-E263607-) 1 TCATCAGTAC TTGCAGGCAT CTCCAAGGGG AAATTTGGAT CAGCAACACC ATTAGGACAA 61 AAGACAACCN TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT 121 TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG 181 CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA 241 CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA 301 ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT 361 CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG 421 GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA 481 GTCTGACATG TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT 541 GCCATCTTAG TTCCCCTCGG AGCATTGATG ACCCATGTTT GGCCTCGATT GAGACGTCGA 601 CCACCGCCTA TCGGAGTCGA TGCCGCCCAA ACGGTGTATG GACAGTTGTT GCGTACCTCA 661 ATAGTGGCAG CATAAGTATA AGTCACACAA AGAAGGAAGA AGAGAACAAA Predicted gene structure (within gDNA segment 38501 to 43066): Exon 1 40950 41602 ( 653 n); cDNA 58 710 ( 653 n); score: 0.874 MATCH C08HBa0235H18.1+ SGN-E263607- 0.874 653 0.920 C PGS_C08HBa0235H18.1+_SGN-E263607- (40950 41602) Alignment (genomic DNA sequence = upper lines): CAAAAAACAA CCCTATAATT TGTACTACCA CTAGGGCAAG TGAATAAGCT AGTAGGATCA 41009 ||||| |||| || |||| || |||||||||| | |||||||| | ||| ||| |||||||| CAAAAGACAA CCNTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT TGTAGGATCG 117 TCTTGAGGGT AGCTATACGC ATTAGGGCAC CTTTGTTTGA AAAATCTCGA AAATTTTGTA 41069 ||||| |||| ||||||| || || || || |||| |||| ||||| | || || | |||| TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA CAACTCTGTA 177 GGACCACATG GGCCTTGAGT ACAACAATAT TGTTGTCCTC CGAACGTGGT ACAAGGGTTG 41129 || ||||||| | ||||| || ||||||||| |||||||||| | |||||||| |||||||||| GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT ACAAGGGTTG 237 TTACATCCTC CGGGTACCCT AAGTGGACTA GGGCATTCAC CGTTTATATT AGCCGTGCAA 41189 |||||||||| | |||||| | ||| | | | || ||||||| | |||||||| ||||||||| TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT GGCCGTGCAA 297 TGAATTGCAT GGCATTTTCC TCCACTAGGA TTGGTTGGGG CGAAAGTCAT CGGTATATTA 41249 |||||||| | | |||||||| ||||||||| || ||||||| | |||||||| || |||||| TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT TGGAATATTA 357 AATCCGTCAA CCAAAGAAAT GTCCCAGAAA TCTAGGTTGC TGAATTGGTC CAAAGCATAT 41309 ||||| || | | |||||||| |||||| ||| |||| ||||| | || ||||| ||| || || AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGCGTAC 417 TCAGCTAGGG TGTTTGGGGG TTTGCCCCAC CCGGTACAGT GTAGGACCCC ACCACAATCA 41369 || ||||||| |||||||||| ||||||||| |||||||| | ||| ||| || |||||||||| TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC ACCACAATCA 477 CCAGTTTGGC ATGAACCTCT ACCAGCACCA TTAAAATTGC AATTAGTACG ACCCCATATA 41429 ||||| || | ||| |||||| || ||| || ||||| |||| || |||||| |||||||||| CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG ACCCCATATA 537 CGTGCCATCT TAGTGCCCCT CGGCGCATTG ATGACCCATG TTTGGCCTCG ATCGAGACGT 41489 |||||||||| |||| ||||| ||| |||||| |||||||||| |||||||||| || ||||||| CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG TTTGGCCTCG ATTGAGACGT 597 CGACCACCGC CTATCGGGGT CGATGCTGCC CAAACGGTGT AGGGACAATT GTTGCGTACC 41549 |||||||||| ||||||| || |||||| ||| |||||||||| | ||||| || |||||||||| CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT ATGGACAGTT GTTGCGTACC 657 TCGATAGTGG CAGCATAAGT GTAAGTCACT AAAGCAAGGA AGAAGAAAAT AAA 41602 || ||||||| |||||||||| |||||||| || ||||| |||||| || ||| TCAATAGTGG CAGCATAAGT ATAAGTCACA CAAAGAAGGA AGAAGAGAAC AAA 710 hqPGS_C08HBa0235H18.1+_SGN-E263607- (40950 41602) ******************************************************************************** EST sequence 572 -strand 652 n (File: SGN-E213536-) 1 CCAAGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG ACAACCNTAT AGTTTGTACT 61 ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG 121 ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA 181 ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC 241 GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT 301 AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA 361 AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC 421 CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC 481 AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC 541 ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC 601 CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT AA Predicted gene structure (within gDNA segment 38731 to 42716): Exon 1 40950 41567 ( 618 n); cDNA 35 652 ( 618 n); score: 0.879 MATCH C08HBa0235H18.1+ SGN-E213536- 0.879 618 0.948 C PGS_C08HBa0235H18.1+_SGN-E213536- (40950 41567) Alignment (genomic DNA sequence = upper lines): CAAAAAACAA CCCTATAATT TGTACTACCA CTAGGGCAAG TGAATAAGCT AGTAGGATCA 41009 ||||| |||| || |||| || |||||||||| | |||||||| | ||| ||| |||||||| CAAAAGACAA CCNTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT TGTAGGATCG 94 TCTTGAGGGT AGCTATACGC ATTAGGGCAC CTTTGTTTGA AAAATCTCGA AAATTTTGTA 41069 ||||| |||| ||||||| || || || || |||| |||| ||||| | || || | |||| TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA CAACTCTGTA 154 GGACCACATG GGCCTTGAGT ACAACAATAT TGTTGTCCTC CGAACGTGGT ACAAGGGTTG 41129 || ||||||| | ||||| || ||||||||| |||||||||| | |||||||| |||||||||| GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT ACAAGGGTTG 214 TTACATCCTC CGGGTACCCT AAGTGGACTA GGGCATTCAC CGTTTATATT AGCCGTGCAA 41189 |||||||||| | |||||| | ||| | | | || ||||||| | |||||||| ||||||||| TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT GGCCGTGCAA 274 TGAATTGCAT GGCATTTTCC TCCACTAGGA TTGGTTGGGG CGAAAGTCAT CGGTATATTA 41249 |||||||| | | |||||||| ||||||||| || ||||||| | |||||||| || |||||| TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT TGGAATATTA 334 AATCCGTCAA CCAAAGAAAT GTCCCAGAAA TCTAGGTTGC TGAATTGGTC CAAAGCATAT 41309 ||||| || | | |||||||| |||||| ||| |||| ||||| | || ||||| ||| || || AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGCGTAC 394 TCAGCTAGGG TGTTTGGGGG TTTGCCCCAC CCGGTACAGT GTAGGACCCC ACCACAATCA 41369 || ||||||| |||||||||| ||||||||| |||||||| | ||| ||| || |||||||||| TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC ACCACAATCA 454 CCAGTTTGGC ATGAACCTCT ACCAGCACCA TTAAAATTGC AATTAGTACG ACCCCATATA 41429 ||||| || | ||| |||||| || ||| || ||||| |||| || |||||| |||||||||| CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG ACCCCATATA 514 CGTGCCATCT TAGTGCCCCT CGGCGCATTG ATGACCCATG TTTGGCCTCG ATCGAGACGT 41489 |||||||||| |||| ||||| ||| |||||| |||||||||| |||||||||| || ||||||| CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG TTTGGCCTCG ATTGAGACGT 574 CGACCACCGC CTATCGGGGT CGATGCTGCC CAAACGGTGT AGGGACAATT GTTGCGTACC 41549 |||||||||| ||||||| || |||||| ||| |||||||||| | ||||| || |||||||||| CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT ATGGACAGTT GTTGCGTACC 634 TCGATAGTGG CAGCATAA 41567 || ||||||| |||||||| TCAATAGTGG CAGCATAA 652 hqPGS_C08HBa0235H18.1+_SGN-E213536- (40950 41567) ******************************************************************************** EST sequence 715 -strand 643 n (File: SGN-E213897-) 1 AAGGGGAAAT TTGAATCAGC AACACCATTA GGACAAAAGA CANCCNTATA GTTTGTACTA 61 CCACCAGGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG 121 ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA 181 ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC 241 GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT 301 AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA 361 AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC 421 CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC 481 AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC 541 ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC 601 CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTG Predicted gene structure (within gDNA segment 38731 to 42626): Exon 1 40950 41558 ( 609 n); cDNA 34 643 ( 610 n); score: 0.871 MATCH C08HBa0235H18.1+ SGN-E213897- 0.871 609 0.947 C PGS_C08HBa0235H18.1+_SGN-E213897- (40950 41558) Alignment (genomic DNA sequence = upper lines): CAAAAAACAA CCCTATAATT TGTACTACCA CTA-GGGCAA GTGAATAAGC TAGTAGGATC 41008 ||||| ||| || |||| || |||||||||| | | |||||| || ||| || | |||||||| CAAAAGACAN CCNTATAGTT TGTACTACCA CCAGGGGCAA GTAAATGTGC TTGTAGGATC 93 ATCTTGAGGG TAGCTATACG CATTAGGGCA CCTTTGTTTG AAAAATCTCG AAAATTTTGT 41068 ||||| ||| |||||||| | ||| || || |||| ||| |||||| | | | || | ||| GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG AAAAATTTGG ACAACTCTGT 153 AGGACCACAT GGGCCTTGAG TACAACAATA TTGTTGTCCT CCGAACGTGG TACAAGGGTT 41128 ||| |||||| || ||||| | | |||||||| |||||||||| || ||||||| |||||||||| AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT CCAAACGTGG TACAAGGGTT 213 GTTACATCCT CCGGGTACCC TAAGTGGACT AGGGCATTCA CCGTTTATAT TAGCCGTGCA 41188 |||||||||| || |||||| |||| | | ||| |||||| || ||||||| | |||||||| GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA 273 ATGAATTGCA TGGCATTTTC CTCCACTAGG ATTGGTTGGG GCGAAAGTCA TCGGTATATT 41248 ||||||||| || ||||||| |||||||||| || |||||| || ||||||| | || ||||| ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG GCAAAAGTCA TTGGAATATT 333 AAATCCGTCA ACCAAAGAAA TGTCCCAGAA ATCTAGGTTG CTGAATTGGT CCAAAGCATA 41308 |||||| || || ||||||| ||||||| || ||||| |||| || || |||| |||| || || AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG CTAAACTGGT CCAAGGCGTA 393 TTCAGCTAGG GTGTTTGGGG GTTTGCCCCA CCCGGTACAG TGTAGGACCC CACCACAATC 41368 || |||||| |||||||||| |||||||||| |||||||| |||| ||| | |||||||||| CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC TGTAAGACTC CACCACAATC 453 ACCAGTTTGG CATGAACCTC TACCAGCACC ATTAAAATTG CAATTAGTAC GACCCCATAT 41428 |||||| || |||| ||||| | || ||| | |||||| ||| ||| ||||| |||||||||| ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG CAACCAGTAC GACCCCATAT 513 ACGTGCCATC TTAGTGCCCC TCGGCGCATT GATGACCCAT GTTTGGCCTC GATCGAGACG 41488 |||||||||| ||||| |||| |||| ||||| |||||||||| |||||||||| ||| |||||| ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG 573 TCGACCACCG CCTATCGGGG TCGATGCTGC CCAAACGGTG TAGGGACAAT TGTTGCGTAC 41548 |||||||||| |||||||| | ||||||| || |||||||||| || ||||| | |||||||||| TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG TATGGACAGT TGTTGCGTAC 633 CTCGATAGTG 41558 ||| |||||| CTCAATAGTG 643 hqPGS_C08HBa0235H18.1+_SGN-E213897- (40950 41558) ******************************************************************************** EST sequence 1133 -strand 645 n (File: SGN-E258673-) 1 ATCAGTACTT GCAGGCATCT CCAAGGGGAA ATTTGGATCA GCAACACCAT TAGGACAAAA 61 AACAACCCTA TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG 121 TGGGTAGCTA TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC 181 ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 241 TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 301 TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 361 ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 421 TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 481 CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC 541 CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 601 ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTT Predicted gene structure (within gDNA segment 38521 to 42436): Exon 1 40950 41539 ( 590 n); cDNA 56 645 ( 590 n); score: 0.878 MATCH C08HBa0235H18.1+ SGN-E258673- 0.878 590 0.915 C PGS_C08HBa0235H18.1+_SGN-E258673- (40950 41539) Alignment (genomic DNA sequence = upper lines): CAAAAAACAA CCCTATAATT TGTACTACCA CTAGGGCAAG TGAATAAGCT AGTAGGATCA 41009 |||||||||| ||||||| || |||||||||| | |||||||| | ||| ||| |||||||| CAAAAAACAA CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT TGTAGGATCG 115 TCTTGAGGGT AGCTATACGC ATTAGGGCAC CTTTGTTTGA AAAATCTCGA AAATTTTGTA 41069 ||||| |||| ||||||| || || || || |||| |||| ||||| | || || | |||| TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA CAACTCTGTA 175 GGACCACATG GGCCTTGAGT ACAACAATAT TGTTGTCCTC CGAACGTGGT ACAAGGGTTG 41129 || ||||||| | ||||| || ||||||||| |||||||||| | |||||||| |||||||||| GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT ACAAGGGTTG 235 TTACATCCTC CGGGTACCCT AAGTGGACTA GGGCATTCAC CGTTTATATT AGCCGTGCAA 41189 |||||||||| | |||||| | ||| | | | || ||||||| | |||||||| ||||||||| TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT GGCCGTGCAA 295 TGAATTGCAT GGCATTTTCC TCCACTAGGA TTGGTTGGGG CGAAAGTCAT CGGTATATTA 41249 |||||||| | | |||||||| ||||||||| || ||||||| | |||||||| || |||||| TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT TGGAATATTA 355 AATCCGTCAA CCAAAGAAAT GTCCCAGAAA TCTAGGTTGC TGAATTGGTC CAAAGCATAT 41309 ||||| || | | |||||||| |||||| ||| |||| ||||| | || ||||| ||| || || AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGCGTAC 415 TCAGCTAGGG TGTTTGGGGG TTTGCCCCAC CCGGTACAGT GTAGGACCCC ACCACAATCA 41369 || ||||||| |||||||||| ||||||||| |||||||| | ||| ||| || |||||||||| TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC ACCACAATCA 475 CCAGTTTGGC ATGAACCTCT ACCAGCACCA TTAAAATTGC AATTAGTACG ACCCCATATA 41429 ||||| || | ||| |||||| || ||| || ||||| |||| || |||||| |||||||||| CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG ACCCCATATA 535 CGTGCCATCT TAGTGCCCCT CGGCGCATTG ATGACCCATG TTTGGCCTCG ATCGAGACGT 41489 |||||||||| |||| ||||| ||| |||||| |||||||||| |||||||||| || ||||||| CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG TTTGGCCTCG ATTGAGACGT 595 CGACCACCGC CTATCGGGGT CGATGCTGCC CAAACGGTGT AGGGACAATT 41539 |||||||||| ||||||| || |||||| ||| |||||||||| | ||||| || CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT ATGGACAGTT 645 hqPGS_C08HBa0235H18.1+_SGN-E258673- (40950 41539) ******************************************************************************** EST sequence 471 -strand 577 n (File: SGN-E211610-) 1 CAGTACTTGC AGGCATCTCC AAGGGGAAAT TTGGATCAGC AACACCATTA GGACAAAAGA 61 CAACCTTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA TCGTCTTGTG 121 GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT GTAGGGCCAC 181 ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC 241 CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG 301 CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT 361 CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA 421 GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT 481 GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA 541 TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTG Predicted gene structure (within gDNA segment 38541 to 42073): Exon 1 40950 41473 ( 524 n); cDNA 54 577 ( 524 n); score: 0.868 MATCH C08HBa0235H18.1+ SGN-E211610- 0.868 524 0.908 C PGS_C08HBa0235H18.1+_SGN-E211610- (40950 41473) Alignment (genomic DNA sequence = upper lines): CAAAAAACAA CCCTATAATT TGTACTACCA CTAGGGCAAG TGAATAAGCT AGTAGGATCA 41009 ||||| |||| || |||| || |||||||||| | |||||||| | ||| ||| |||||||| CAAAAGACAA CCTTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT TGTAGGATCG 113 TCTTGAGGGT AGCTATACGC ATTAGGGCAC CTTTGTTTGA AAAATCTCGA AAATTTTGTA 41069 ||||| |||| ||||||| || || || || |||| |||| ||||| | || || | |||| TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA CAACTCTGTA 173 GGACCACATG GGCCTTGAGT ACAACAATAT TGTTGTCCTC CGAACGTGGT ACAAGGGTTG 41129 || ||||||| | ||||| || ||||||||| |||||||||| | |||||||| |||||||||| GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT ACAAGGGTTG 233 TTACATCCTC CGGGTACCCT AAGTGGACTA GGGCATTCAC CGTTTATATT AGCCGTGCAA 41189 |||||||||| | |||||| | ||| | | | || ||||||| | |||||||| ||||||||| TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT GGCCGTGCAA 293 TGAATTGCAT GGCATTTTCC TCCACTAGGA TTGGTTGGGG CGAAAGTCAT CGGTATATTA 41249 |||||||| | | |||||||| ||||||||| || ||||||| | |||||||| || |||||| TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT TGGAATATTA 353 AATCCGTCAA CCAAAGAAAT GTCCCAGAAA TCTAGGTTGC TGAATTGGTC CAAAGCATAT 41309 ||||| || | | |||||||| |||||| ||| |||| ||||| | || ||||| ||| || || AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGCGTAC 413 TCAGCTAGGG TGTTTGGGGG TTTGCCCCAC CCGGTACAGT GTAGGACCCC ACCACAATCA 41369 || ||||||| |||||||||| ||||||||| |||||||| | ||| ||| || |||||||||| TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC ACCACAATCA 473 CCAGTTTGGC ATGAACCTCT ACCAGCACCA TTAAAATTGC AATTAGTACG ACCCCATATA 41429 ||||| || | ||| |||||| || ||| || ||||| |||| || |||||| |||||||||| CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG ACCCCATATA 533 CGTGCCATCT TAGTGCCCCT CGGCGCATTG ATGACCCATG TTTG 41473 |||||||||| |||| ||||| ||| |||||| |||||||||| |||| CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG TTTG 577 hqPGS_C08HBa0235H18.1+_SGN-E211610- (40950 41473) ******************************************************************************** EST sequence 1177 -strand 346 n (File: SGN-E260107-) 1 TCATCAGTAC TGGCAGGCAT CTCCAAGGGG AAATTTGGAT CAGCAACACC ATTAGGACAA 61 AAGCCAACCT TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT 121 TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG 181 CCACATGGAC CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA 241 CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA 301 ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCA Predicted gene structure (within gDNA segment 40339 to 45149): Exon 1 40958 41238 ( 281 n); cDNA 66 346 ( 281 n); score: 0.858 MATCH C08HBa0235H18.1+ SGN-E260107- 0.858 281 0.812 C PGS_C08HBa0235H18.1+_SGN-E260107- (40958 41238) Alignment (genomic DNA sequence = upper lines): AACCCTATAA TTTGTACTAC CACTAGGGCA AGTGAATAAG CTAGTAGGAT CATCTTGAGG 41017 |||| |||| |||||||||| ||| |||||| ||| ||| | || ||||||| | ||||| || AACCTTATAG TTTGTACTAC CACCAGGGCA AGTAAATGTG CTTGTAGGAT CGTCTTGTGG 125 GTAGCTATAC GCATTAGGGC ACCTTTGTTT GAAAAATCTC GAAAATTTTG TAGGACCACA 41077 ||||||||| |||| || | | |||| || ||||||| | || || | || |||| ||||| GTAGCTATAA GCATCGGGAC ATCTTTTCTT GAAAAATTTG GACAACTCTG TAGGGCCACA 185 TGGGCCTTGA GTACAACAAT ATTGTTGTCC TCCGAACGTG GTACAAGGGT TGTTACATCC 41137 ||| ||||| || ||||||| |||||||||| ||| |||||| |||||||||| |||||||||| TGGACCTTGG GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC 245 TCCGGGTACC CTAAGTGGAC TAGGGCATTC ACCGTTTATA TTAGCCGTGC AATGAATTGC 41197 ||| |||||| |||| | | ||| ||||| ||| |||||| || ||||||| |||||||||| TCCAGGTACC TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC 305 ATGGCATTTT CCTCCACTAG GATTGGTTGG GGCGAAAGTC A 41238 || |||||| |||||||||| | || ||||| ||| |||||| | GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC A 346 hqPGS_C08HBa0235H18.1+_SGN-E260107- (40958 41238) ******************************************************************************** EST sequence 657 -strand 511 n (File: SGN-E204787-) 1 TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 61 TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 121 CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 181 GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 241 ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 301 AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT 361 TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG 421 TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG 481 TTCCCCTCGG AGCATTGATG ACCCATGTTT G Predicted gene structure (within gDNA segment 39201 to 42073): Exon 1 40963 41473 ( 511 n); cDNA 1 511 ( 511 n); score: 0.869 MATCH C08HBa0235H18.1+ SGN-E204787- 0.869 511 1.000 C PGS_C08HBa0235H18.1+_SGN-E204787- (40963 41473) Alignment (genomic DNA sequence = upper lines): TATAATTTGT ACTACCACTA GGGCAAGTGA ATAAGCTAGT AGGATCATCT TGAGGGTAGC 41022 |||| ||||| |||||||| | |||||||| | || ||| || |||||| ||| || ||||||| TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 60 TATACGCATT AGGGCACCTT TGTTTGAAAA ATCTCGAAAA TTTTGTAGGA CCACATGGGC 41082 |||| |||| || || ||| | ||||||| || | || || | |||||| |||||||| | TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 120 CTTGAGTACA ACAATATTGT TGTCCTCCGA ACGTGGTACA AGGGTTGTTA CATCCTCCGG 41142 |||| || || |||||||||| |||||||| | |||||||||| |||||||||| |||||||| | CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 180 GTACCCTAAG TGGACTAGGG CATTCACCGT TTATATTAGC CGTGCAATGA ATTGCATGGC 41202 ||||| |||| | | ||| |||||||| | ||||||| || |||||||||| ||||| || | GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 240 ATTTTCCTCC ACTAGGATTG GTTGGGGCGA AAGTCATCGG TATATTAAAT CCGTCAACCA 41262 |||||||||| |||||| || |||||||| | ||||||| || ||||||||| || || || | ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 300 AAGAAATGTC CCAGAAATCT AGGTTGCTGA ATTGGTCCAA AGCATATTCA GCTAGGGTGT 41322 |||||||||| ||| |||||| | |||||| | | |||||||| || || || |||||||||| AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT 360 TTGGGGGTTT GCCCCACCCG GTACAGTGTA GGACCCCACC ACAATCACCA GTTTGGCATG 41382 |||||||||| |||||| ||| ||||| |||| ||| ||||| |||||||||| || || |||| TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG 420 AACCTCTACC AGCACCATTA AAATTGCAAT TAGTACGACC CCATATACGT GCCATCTTAG 41442 |||||| || ||| ||||| || |||||| ||||||||| |||||||||| |||||||||| TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG 480 TGCCCCTCGG CGCATTGATG ACCCATGTTT G 41473 | |||||||| ||||||||| |||||||||| | TTCCCCTCGG AGCATTGATG ACCCATGTTT G 511 hqPGS_C08HBa0235H18.1+_SGN-E204787- (40963 41473) ******************************************************************************** EST sequence 880 -strand 499 n (File: SGN-E200099-) 1 TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 61 TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 121 CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 181 GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 241 ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 301 AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT 361 TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG 421 TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG 481 TTCCCCTCGG AGCATTGAT Predicted gene structure (within gDNA segment 39201 to 42223): Exon 1 40963 41461 ( 499 n); cDNA 1 499 ( 499 n); score: 0.866 MATCH C08HBa0235H18.1+ SGN-E200099- 0.866 499 1.000 C PGS_C08HBa0235H18.1+_SGN-E200099- (40963 41461) Alignment (genomic DNA sequence = upper lines): TATAATTTGT ACTACCACTA GGGCAAGTGA ATAAGCTAGT AGGATCATCT TGAGGGTAGC 41022 |||| ||||| |||||||| | |||||||| | || ||| || |||||| ||| || ||||||| TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 60 TATACGCATT AGGGCACCTT TGTTTGAAAA ATCTCGAAAA TTTTGTAGGA CCACATGGGC 41082 |||| |||| || || ||| | ||||||| || | || || | |||||| |||||||| | TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 120 CTTGAGTACA ACAATATTGT TGTCCTCCGA ACGTGGTACA AGGGTTGTTA CATCCTCCGG 41142 |||| || || |||||||||| |||||||| | |||||||||| |||||||||| |||||||| | CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 180 GTACCCTAAG TGGACTAGGG CATTCACCGT TTATATTAGC CGTGCAATGA ATTGCATGGC 41202 ||||| |||| | | ||| |||||||| | ||||||| || |||||||||| ||||| || | GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 240 ATTTTCCTCC ACTAGGATTG GTTGGGGCGA AAGTCATCGG TATATTAAAT CCGTCAACCA 41262 |||||||||| |||||| || |||||||| | ||||||| || ||||||||| || || || | ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 300 AAGAAATGTC CCAGAAATCT AGGTTGCTGA ATTGGTCCAA AGCATATTCA GCTAGGGTGT 41322 |||||||||| ||| |||||| | |||||| | | |||||||| || || || |||||||||| AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT 360 TTGGGGGTTT GCCCCACCCG GTACAGTGTA GGACCCCACC ACAATCACCA GTTTGGCATG 41382 |||||||||| |||||| ||| ||||| |||| ||| ||||| |||||||||| || || |||| TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG 420 AACCTCTACC AGCACCATTA AAATTGCAAT TAGTACGACC CCATATACGT GCCATCTTAG 41442 |||||| || ||| ||||| || |||||| ||||||||| |||||||||| |||||||||| TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG 480 TGCCCCTCGG CGCATTGAT 41461 | |||||||| |||||||| TTCCCCTCGG AGCATTGAT 499 hqPGS_C08HBa0235H18.1+_SGN-E200099- (40963 41461) ******************************************************************************** EST sequence 680 -strand 597 n (File: SGN-E253886-) 1 ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT 61 ATAAGCATCG GGACATCTTT TCTTGAAGAA TTTGCACAAC TCTGTAGGGC CACATGGACC 121 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 181 TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 241 TTTTCCTCCA TTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 301 AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 361 TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT 421 ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATATTAGT 481 TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT 541 CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGC Predicted gene structure (within gDNA segment 39211 to 42646): Exon 1 40964 41560 ( 597 n); cDNA 1 597 ( 597 n); score: 0.871 MATCH C08HBa0235H18.1+ SGN-E253886- 0.871 597 1.000 C PGS_C08HBa0235H18.1+_SGN-E253886- (40964 41560) Alignment (genomic DNA sequence = upper lines): ATAATTTGTA CTACCACTAG GGCAAGTGAA TAAGCTAGTA GGATCATCTT GAGGGTAGCT 41023 ||| |||||| ||||||| || ||||||| || | ||| ||| ||||| |||| | |||||||| ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT 60 ATACGCATTA GGGCACCTTT GTTTGAAAAA TCTCGAAAAT TTTGTAGGAC CACATGGGCC 41083 ||| |||| || || |||| ||||| || | | | || | |||||| | ||||||| || ATAAGCATCG GGACATCTTT TCTTGAAGAA TTTGCACAAC TCTGTAGGGC CACATGGACC 120 TTGAGTACAA CAATATTGTT GTCCTCCGAA CGTGGTACAA GGGTTGTTAC ATCCTCCGGG 41143 ||| || ||| |||||||||| ||||||| || |||||||||| |||||||||| ||||||| || TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 180 TACCCTAAGT GGACTAGGGC ATTCACCGTT TATATTAGCC GTGCAATGAA TTGCATGGCA 41203 |||| |||| | | ||| | ||||||| || |||||| ||| |||||||||| |||| || || TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 240 TTTTCCTCCA CTAGGATTGG TTGGGGCGAA AGTCATCGGT ATATTAAATC CGTCAACCAA 41263 |||||||||| |||| || | ||||||| || |||||| || |||||||||| | || || || TTTTCCTCCA TTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 300 AGAAATGTCC CAGAAATCTA GGTTGCTGAA TTGGTCCAAA GCATATTCAG CTAGGGTGTT 41323 |||||||||| || ||||||| |||||| || |||||||| || || || | |||||||||| AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 360 TGGGGGTTTG CCCCACCCGG TACAGTGTAG GACCCCACCA CAATCACCAG TTTGGCATGA 41383 |||||||||| ||||| |||| |||| |||| ||| |||||| |||||||||| | || |||| TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT 420 ACCTCTACCA GCACCATTAA AATTGCAATT AGTACGACCC CATATACGTG CCATCTTAGT 41443 |||||| || ||| |||||| | |||||| |||||||||| |||||||||| |||| ||||| ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATATTAGT 480 GCCCCTCGGC GCATTGATGA CCCATGTTTG GCCTCGATCG AGACGTCGAC CACCGCCTAT 41503 |||||||| |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT 540 CGGGGTCGAT GCTGCCCAAA CGGTGTAGGG ACAATTGTTG CGTACCTCGA TAGTGGC 41560 ||| |||||| || ||||||| ||||||| || ||| |||||| |||||||| | ||||||| CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGC 597 hqPGS_C08HBa0235H18.1+_SGN-E253886- (40964 41560) ******************************************************************************** EST sequence 598 -strand 598 n (File: SGN-E253452-) 1 TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA 61 TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT 121 TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 181 ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 241 TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 301 GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 361 GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 421 CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 481 CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 541 GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT AGTGGCAG Predicted gene structure (within gDNA segment 39221 to 42666): Exon 1 40965 41562 ( 598 n); cDNA 1 598 ( 598 n); score: 0.878 MATCH C08HBa0235H18.1+ SGN-E253452- 0.878 598 1.000 C PGS_C08HBa0235H18.1+_SGN-E253452- (40965 41562) Alignment (genomic DNA sequence = upper lines): TAATTTGTAC TACCACTAGG GCAAGTGAAT AAGCTAGTAG GATCATCTTG AGGGTAGCTA 41024 || ||||||| |||||| ||| |||||| ||| ||| |||| |||| ||||| ||||||||| TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA 60 TACGCATTAG GGCACCTTTG TTTGAAAAAT CTCGAAAATT TTGTAGGACC ACATGGGCCT 41084 || |||| | | || |||| ||||||||| | || || | |||||| || |||||| ||| TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT 120 TGAGTACAAC AATATTGTTG TCCTCCGAAC GTGGTACAAG GGTTGTTACA TCCTCCGGGT 41144 || || |||| |||||||||| |||||| ||| |||||||||| |||||||||| |||||| ||| TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 180 ACCCTAAGTG GACTAGGGCA TTCACCGTTT ATATTAGCCG TGCAATGAAT TGCATGGCAT 41204 ||| |||| | | ||| || |||||| ||| ||||| |||| |||||||||| ||| || ||| ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 240 TTTCCTCCAC TAGGATTGGT TGGGGCGAAA GTCATCGGTA TATTAAATCC GTCAACCAAA 41264 |||||||||| |||| || || |||||| ||| ||||| || | |||||||||| || || ||| TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 300 GAAATGTCCC AGAAATCTAG GTTGCTGAAT TGGTCCAAAG CATATTCAGC TAGGGTGTTT 41324 |||||||||| | ||||||| |||||| || |||||||| | | || || || |||||||||| GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 360 GGGGGTTTGC CCCACCCGGT ACAGTGTAGG ACCCCACCAC AATCACCAGT TTGGCATGAA 41384 |||||||||| |||| ||||| ||| |||| | || ||||||| |||||||||| || |||| | GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 420 CCTCTACCAG CACCATTAAA ATTGCAATTA GTACGACCCC ATATACGTGC CATCTTAGTG 41444 ||||| || | || ||||||| |||||| | |||||||||| |||||||||| ||||||||| CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 480 CCCCTCGGCG CATTGATGAC CCATGTTTGG CCTCGATCGA GACGTCGACC ACCGCCTATC 41504 |||||||| | |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 540 GGGGTCGATG CTGCCCAAAC GGTGTAGGGA CAATTGTTGC GTACCTCGAT AGTGGCAG 41562 || ||||||| | |||||||| |||||| ||| || ||||||| ||||||| || |||||||| GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT AGTGGCAG 598 hqPGS_C08HBa0235H18.1+_SGN-E253452- (40965 41562) ******************************************************************************** EST sequence 969 -strand 645 n (File: SGN-E276677-) 1 AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT 61 AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 121 GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 181 CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 241 TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 301 AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 361 GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 421 CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 481 CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 541 GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT 601 AAGTATAAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA AGATG Predicted gene structure (within gDNA segment 39231 to 43146): Exon 1 40968 41610 ( 643 n); cDNA 3 645 ( 643 n); score: 0.877 MATCH C08HBa0235H18.1+ SGN-E276677- 0.877 643 0.997 C PGS_C08HBa0235H18.1+_SGN-E276677- (40968 41610) Alignment (genomic DNA sequence = upper lines): TTTGTACTAC CACTAGGGCA AGTGAATAAG CTAGTAGGAT CATCTTGAGG GTAGCTATAC 41027 |||||||||| ||| |||||| ||| ||| | || ||||||| | ||||| || ||||||||| TTTGTACTAC CACCAGGGCA AGTAAATGTG CTTGTAGGAT CGTCTTGTGG GTAGCTATAA 62 GCATTAGGGC ACCTTTGTTT GAAAAATCTC GAAAATTTTG TAGGACCACA TGGGCCTTGA 41087 |||| || | | |||| || ||||||| | || || | || |||| ||||| ||| ||||| GCATCGGGAC ATCTTTTCTT GAAAAATTTG GACAACTCTG TAGGGCCACA TGGACCTTGG 122 GTACAACAAT ATTGTTGTCC TCCGAACGTG GTACAAGGGT TGTTACATCC TCCGGGTACC 41147 || ||||||| |||||||||| ||| |||||| |||||||||| |||||||||| ||| |||||| GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC 182 CTAAGTGGAC TAGGGCATTC ACCGTTTATA TTAGCCGTGC AATGAATTGC ATGGCATTTT 41207 |||| | | ||| ||||| ||| |||||| || ||||||| |||||||||| || |||||| TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT 242 CCTCCACTAG GATTGGTTGG GGCGAAAGTC ATCGGTATAT TAAATCCGTC AACCAAAGAA 41267 |||||||||| | || ||||| ||| |||||| || || |||| ||||||| || || |||||| CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 302 ATGTCCCAGA AATCTAGGTT GCTGAATTGG TCCAAAGCAT ATTCAGCTAG GGTGTTTGGG 41327 |||||||| | |||||| ||| ||| || ||| ||||| || | | || ||||| |||||||||| ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG 362 GGTTTGCCCC ACCCGGTACA GTGTAGGACC CCACCACAAT CACCAGTTTG GCATGAACCT 41387 |||||||||| | |||||||| |||| ||| |||||||||| ||||||| || |||| |||| GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT 422 CTACCAGCAC CATTAAAATT GCAATTAGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC 41447 || || ||| ||||||| || |||| |||| |||||||||| |||||||||| |||||| ||| CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC 482 CTCGGCGCAT TGATGACCCA TGTTTGGCCT CGATCGAGAC GTCGACCACC GCCTATCGGG 41507 ||||| |||| |||||||||| |||||||||| |||| ||||| |||||||||| ||||||||| CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC GCCTATCGGA 542 GTCGATGCTG CCCAAACGGT GTAGGGACAA TTGTTGCGTA CCTCGATAGT GGCAGCATAA 41567 |||||||| | |||||||||| ||| ||||| |||||||||| |||| ||||| |||||||||| GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT GGCAGCATAA 602 GTGTAAGTCA CTAAAGCAAG GAAGAAGAAA ATAAAAGAAG ATG 41610 || ||||||| | || ||| |||||||| | | |||||||| ||| GTATAAGTCA CACAAAGAAG GAAGAAGAGA ACAAAAGAAG ATG 645 hqPGS_C08HBa0235H18.1+_SGN-E276677- (40968 41610) ******************************************************************************** EST sequence 1129 -strand 645 n (File: SGN-E209968-) 1 AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT 61 AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 121 GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 181 CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 241 TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 301 AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 361 GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 421 CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 481 CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 541 GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT 601 AAGTATAAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA AGATG Predicted gene structure (within gDNA segment 39231 to 43146): Exon 1 40968 41610 ( 643 n); cDNA 3 645 ( 643 n); score: 0.877 MATCH C08HBa0235H18.1+ SGN-E209968- 0.877 643 0.997 C PGS_C08HBa0235H18.1+_SGN-E209968- (40968 41610) Alignment (genomic DNA sequence = upper lines): TTTGTACTAC CACTAGGGCA AGTGAATAAG CTAGTAGGAT CATCTTGAGG GTAGCTATAC 41027 |||||||||| ||| |||||| ||| ||| | || ||||||| | ||||| || ||||||||| TTTGTACTAC CACCAGGGCA AGTAAATGTG CTTGTAGGAT CGTCTTGTGG GTAGCTATAA 62 GCATTAGGGC ACCTTTGTTT GAAAAATCTC GAAAATTTTG TAGGACCACA TGGGCCTTGA 41087 |||| || | | |||| || ||||||| | || || | || |||| ||||| ||| ||||| GCATCGGGAC ATCTTTTCTT GAAAAATTTG GACAACTCTG TAGGGCCACA TGGACCTTGG 122 GTACAACAAT ATTGTTGTCC TCCGAACGTG GTACAAGGGT TGTTACATCC TCCGGGTACC 41147 || ||||||| |||||||||| ||| |||||| |||||||||| |||||||||| ||| |||||| GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC 182 CTAAGTGGAC TAGGGCATTC ACCGTTTATA TTAGCCGTGC AATGAATTGC ATGGCATTTT 41207 |||| | | ||| ||||| ||| |||||| || ||||||| |||||||||| || |||||| TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT 242 CCTCCACTAG GATTGGTTGG GGCGAAAGTC ATCGGTATAT TAAATCCGTC AACCAAAGAA 41267 |||||||||| | || ||||| ||| |||||| || || |||| ||||||| || || |||||| CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 302 ATGTCCCAGA AATCTAGGTT GCTGAATTGG TCCAAAGCAT ATTCAGCTAG GGTGTTTGGG 41327 |||||||| | |||||| ||| ||| || ||| ||||| || | | || ||||| |||||||||| ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG 362 GGTTTGCCCC ACCCGGTACA GTGTAGGACC CCACCACAAT CACCAGTTTG GCATGAACCT 41387 |||||||||| | |||||||| |||| ||| |||||||||| ||||||| || |||| |||| GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT 422 CTACCAGCAC CATTAAAATT GCAATTAGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC 41447 || || ||| ||||||| || |||| |||| |||||||||| |||||||||| |||||| ||| CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC 482 CTCGGCGCAT TGATGACCCA TGTTTGGCCT CGATCGAGAC GTCGACCACC GCCTATCGGG 41507 ||||| |||| |||||||||| |||||||||| |||| ||||| |||||||||| ||||||||| CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC GCCTATCGGA 542 GTCGATGCTG CCCAAACGGT GTAGGGACAA TTGTTGCGTA CCTCGATAGT GGCAGCATAA 41567 |||||||| | |||||||||| ||| ||||| |||||||||| |||| ||||| |||||||||| GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT GGCAGCATAA 602 GTGTAAGTCA CTAAAGCAAG GAAGAAGAAA ATAAAAGAAG ATG 41610 || ||||||| | || ||| |||||||| | | |||||||| ||| GTATAAGTCA CACAAAGAAG GAAGAAGAGA ACAAAAGAAG ATG 645 hqPGS_C08HBa0235H18.1+_SGN-E209968- (40968 41610) ******************************************************************************** EST sequence 671 -strand 595 n (File: SGN-E254383-) 1 AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT 61 AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 121 GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 181 CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 241 TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 301 AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 361 GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 421 CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 481 CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 541 GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGC Predicted gene structure (within gDNA segment 39231 to 42646): Exon 1 40968 41560 ( 593 n); cDNA 3 595 ( 593 n); score: 0.879 MATCH C08HBa0235H18.1+ SGN-E254383- 0.879 593 0.997 C PGS_C08HBa0235H18.1+_SGN-E254383- (40968 41560) Alignment (genomic DNA sequence = upper lines): TTTGTACTAC CACTAGGGCA AGTGAATAAG CTAGTAGGAT CATCTTGAGG GTAGCTATAC 41027 |||||||||| ||| |||||| ||| ||| | || ||||||| | ||||| || ||||||||| TTTGTACTAC CACCAGGGCA AGTAAATGTG CTTGTAGGAT CGTCTTGTGG GTAGCTATAA 62 GCATTAGGGC ACCTTTGTTT GAAAAATCTC GAAAATTTTG TAGGACCACA TGGGCCTTGA 41087 |||| || | | |||| || ||||||| | || || | || |||| ||||| ||| ||||| GCATCGGGAC ATCTTTTCTT GAAAAATTTG GACAACTCTG TAGGGCCACA TGGACCTTGG 122 GTACAACAAT ATTGTTGTCC TCCGAACGTG GTACAAGGGT TGTTACATCC TCCGGGTACC 41147 || ||||||| |||||||||| ||| |||||| |||||||||| |||||||||| ||| |||||| GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC 182 CTAAGTGGAC TAGGGCATTC ACCGTTTATA TTAGCCGTGC AATGAATTGC ATGGCATTTT 41207 |||| | | ||| ||||| ||| |||||| || ||||||| |||||||||| || |||||| TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT 242 CCTCCACTAG GATTGGTTGG GGCGAAAGTC ATCGGTATAT TAAATCCGTC AACCAAAGAA 41267 |||||||||| | || ||||| ||| |||||| || || |||| ||||||| || || |||||| CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 302 ATGTCCCAGA AATCTAGGTT GCTGAATTGG TCCAAAGCAT ATTCAGCTAG GGTGTTTGGG 41327 |||||||| | |||||| ||| ||| || ||| ||||| || | | || ||||| |||||||||| ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG 362 GGTTTGCCCC ACCCGGTACA GTGTAGGACC CCACCACAAT CACCAGTTTG GCATGAACCT 41387 |||||||||| | |||||||| |||| ||| |||||||||| ||||||| || |||| |||| GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT 422 CTACCAGCAC CATTAAAATT GCAATTAGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC 41447 || || ||| ||||||| || |||| |||| |||||||||| |||||||||| |||||| ||| CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC 482 CTCGGCGCAT TGATGACCCA TGTTTGGCCT CGATCGAGAC GTCGACCACC GCCTATCGGG 41507 ||||| |||| |||||||||| |||||||||| |||| ||||| |||||||||| ||||||||| CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC GCCTATCGGA 542 GTCGATGCTG CCCAAACGGT GTAGGGACAA TTGTTGCGTA CCTCGATAGT GGC 41560 |||||||| | |||||||||| ||| ||||| |||||||||| |||| ||||| ||| GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT GGC 595 hqPGS_C08HBa0235H18.1+_SGN-E254383- (40968 41560) ******************************************************************************** EST sequence 635 -strand 602 n (File: SGN-E303865-) 1 ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC 61 GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA 121 ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GNTACCTTAA 181 GGGCGCGAGG ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC 241 CACTAGGTTT TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT 301 CCCAAAAATC TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT 361 TGCCCCATCC GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC 421 CTGCAGCATT AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG 481 GAGCATTGAT GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG 541 ATGCCGCCCA AACGGTGTAT GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAAGTAT 601 AA Predicted gene structure (within gDNA segment 39301 to 42776): Exon 1 40973 41573 ( 601 n); cDNA 1 602 ( 602 n); score: 0.874 MATCH C08HBa0235H18.1+ SGN-E303865- 0.874 601 0.998 C PGS_C08HBa0235H18.1+_SGN-E303865- (40973 41573) Alignment (genomic DNA sequence = upper lines): ACTACCACTA GGGCAAGTGA ATAAGCTAGT AGGATCATCT TGAGGGTAGC TATACGCATT 41032 |||||||| | |||||||| | || ||| || |||||| ||| || ||||||| |||| |||| ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC 60 AGGGCACCTT TGTTTGAAAA ATCTCGAAAA TTTTGTAGGA CCACATGGGC CTTGAGTACA 41092 || || ||| | ||||||| || | || || | |||||| |||||||| | |||| || || GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA 120 ACAATATTGT TGTCCTCCGA ACGTGGTACA AGGGTTGTTA CATCCTCC-G GGTACCCTAA 41151 |||||||||| |||||||| | |||||||||| |||||||||| |||||||| | | |||| ||| ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GNTACCTTAA 180 GTGGACTAGG GCATTCACCG TTTATATTAG CCGTGCAATG AATTGCATGG CATTTTCCTC 41211 | | | ||| |||||||| |||||||| | |||||||||| |||||| || |||||||||| GGGCGCGAGG ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC 240 CACTAGGATT GGTTGGGGCG AAAGTCATCG GTATATTAAA TCCGTCAACC AAAGAAATGT 41271 ||||||| || |||||||| |||||||| | | |||||||| ||| || || |||||||||| CACTAGGTTT TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT 300 CCCAGAAATC TAGGTTGCTG AATTGGTCCA AAGCATATTC AGCTAGGGTG TTTGGGGGTT 41331 |||| ||||| || |||||| || ||||||| | || || || ||||||||| |||||||||| CCCAAAAATC TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT 360 TGCCCCACCC GGTACAGTGT AGGACCCCAC CACAATCACC AGTTTGGCAT GAACCTCTAC 41391 ||||||| || |||||| ||| | ||| |||| |||||||||| ||| || ||| | |||||| | TGCCCCATCC GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC 420 CAGCACCATT AAAATTGCAA TTAGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG 41451 | ||| |||| ||| |||||| |||||||| |||||||||| |||||||||| || ||||||| CTGCAGCATT AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG 480 GCGCATTGAT GACCCATGTT TGGCCTCGAT CGAGACGTCG ACCACCGCCT ATCGGGGTCG 41511 | |||||||| |||||||||| |||||||||| ||||||||| |||||||||| ||||| |||| GAGCATTGAT GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG 540 ATGCTGCCCA AACGGTGTAG GGACAATTGT TGCGTACCTC GATAGTGGCA GCATAAGTGT 41571 |||| ||||| ||||||||| ||||| |||| |||||||||| ||||||||| |||||||| | ATGCCGCCCA AACGGTGTAT GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAAGTAT 600 AA 41573 || AA 602 hqPGS_C08HBa0235H18.1+_SGN-E303865- (40973 41573) ******************************************************************************** EST sequence 1223 -strand 646 n (File: SGN-E294134-) 1 AGGGCAAGTA AATGTGCTAG TAGGATCATC TTGTGGGTAG CTATACGCAT CAGGACATCT 61 TTGTTTGAAA AATCTCGCCA AATCAGTAGG GCCACATGGA CCTTGTGTGC AACAATATTG 121 TTGTCCTCCG AACGTGGTAC AAGGATTGTT ACATCCTCCG GGTACCCTAA GTGAACCAGG 181 ACATTCACCA TTTATATTAG CCGTACAATG AATTGCATGG CATTTCCCTC CACTAGGATT 241 GGTCGGGGCG AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC 301 TAGGTTGCTA AACTGGTCCA AGGCGTACTC GGCCAGGGTG TTTGGTGGTT TGCCCCACCC 361 GGTACATTGC AAGACCCCAC CACAATCACC AGTCTGACAT GAACCTCTAC CAGCACCATC 421 AAAGTTGCAA TTCGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GTGCATTGAT 481 GACCCATGTT TGGCCTCGAT CAAGACGTCG ACCACCGCCT ATTGGGGTCG ACGCCGCCCA 541 GACGGTGTAT GGACAGTTGT TGCGTACCTC GAAAGTGGCA GCATAAGTGT AAGTCACAAA 601 AGCAAGAAGG AAGAAAACAA AAGAAGATCT CAAGTAGGCC ATGTTT Predicted gene structure (within gDNA segment 40237 to 42668): Exon 1 40982 41627 ( 646 n); cDNA 1 646 ( 646 n); score: 0.907 MATCH C08HBa0235H18.1+ SGN-E294134- 0.907 646 1.000 C PGS_C08HBa0235H18.1+_SGN-E294134- (40982 41627) Alignment (genomic DNA sequence = upper lines): AGGGCAAGTG AATAAGCTAG TAGGATCATC TTGAGGGTAG CTATACGCAT TAGGGCACCT 41041 ||||||||| ||| ||||| |||||||||| ||| |||||| |||||||||| ||| || || AGGGCAAGTA AATGTGCTAG TAGGATCATC TTGTGGGTAG CTATACGCAT CAGGACATCT 60 TTGTTTGAAA AATCTCGAAA ATTTTGTAGG ACCACATGGG CCTTGAGTAC AACAATATTG 41101 |||||||||| ||||||| | | | ||||| |||||||| ||||| || | |||||||||| TTGTTTGAAA AATCTCGCCA AATCAGTAGG GCCACATGGA CCTTGTGTGC AACAATATTG 120 TTGTCCTCCG AACGTGGTAC AAGGGTTGTT ACATCCTCCG GGTACCCTAA GTGGACTAGG 41161 |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| ||| || ||| TTGTCCTCCG AACGTGGTAC AAGGATTGTT ACATCCTCCG GGTACCCTAA GTGAACCAGG 180 GCATTCACCG TTTATATTAG CCGTGCAATG AATTGCATGG CATTTTCCTC CACTAGGATT 41221 |||||||| |||||||||| |||| ||||| |||||||||| ||||| |||| |||||||||| ACATTCACCA TTTATATTAG CCGTACAATG AATTGCATGG CATTTCCCTC CACTAGGATT 240 GGTTGGGGCG AAAGTCATCG GTATATTAAA TCCGTCAACC AAAGAAATGT CCCAGAAATC 41281 ||| |||||| |||||||| | | |||||||| ||| || || |||||||||| |||||||||| GGTCGGGGCG AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC 300 TAGGTTGCTG AATTGGTCCA AAGCATATTC AGCTAGGGTG TTTGGGGGTT TGCCCCACCC 41341 ||||||||| || ||||||| | || || || || |||||| ||||| |||| |||||||||| TAGGTTGCTA AACTGGTCCA AGGCGTACTC GGCCAGGGTG TTTGGTGGTT TGCCCCACCC 360 GGTACAGTGT AGGACCCCAC CACAATCACC AGTTTGGCAT GAACCTCTAC CAGCACCATT 41401 |||||| || | |||||||| |||||||||| ||| || ||| |||||||||| ||||||||| GGTACATTGC AAGACCCCAC CACAATCACC AGTCTGACAT GAACCTCTAC CAGCACCATC 420 AAAATTGCAA TTAGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GCGCATTGAT 41461 ||| |||||| || ||||||| |||||||||| |||||||||| |||||||||| | |||||||| AAAGTTGCAA TTCGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GTGCATTGAT 480 GACCCATGTT TGGCCTCGAT CGAGACGTCG ACCACCGCCT ATCGGGGTCG ATGCTGCCCA 41521 |||||||||| |||||||||| | |||||||| |||||||||| || ||||||| | || ||||| GACCCATGTT TGGCCTCGAT CAAGACGTCG ACCACCGCCT ATTGGGGTCG ACGCCGCCCA 540 AACGGTGTAG GGACAATTGT TGCGTACCTC GATAGTGGCA GCATAAGTGT AAGTCACTAA 41581 |||||||| ||||| |||| |||||||||| || ||||||| |||||||||| ||||||| || GACGGTGTAT GGACAGTTGT TGCGTACCTC GAAAGTGGCA GCATAAGTGT AAGTCACAAA 600 AGCAAGGAAG AAGAAAATAA AAGAAGATGT CAAGTAGCCC ATGTTT 41627 |||||| | | ||||||| || |||||||| | ||||||| || |||||| AGCAAGAAGG AAGAAAACAA AAGAAGATCT CAAGTAGGCC ATGTTT 646 hqPGS_C08HBa0235H18.1+_SGN-E294134- (40982 41627) ******************************************************************************** EST sequence 588 -strand 632 n (File: SGN-E302616-) 1 AGGGCAAGTA AATGTGCTAG TAGGATCATC CTGTGGGTAG CTATACGCAT CAGGACATCT 61 CTGTTTGCAC AATCCCGACA AATCAGTAGG GCCACATGGA CCTTGTGTGC AACAATATTG 121 TTGTCCTCCG AACGTGGTAC AAGGATTGTT ACATCCTCCG GGTACCCTAA GTGAACCAGG 181 ACATTCACCA TTTATATTAG CCGTACAATG AATTGCATGG CATTTCCCTC CACTAGGATT 241 GGTCGGGGCG AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC 301 TAGGTTGCTA AACTGGTCCA AGGCGTACTC GGCCAGGGTG TTTGGTGGTT TGCCCCACCC 361 GGTACATTGC AAGACCCCAC CACAATCACC AGTCTGACAT GAACCTCTAC CAGCACCATC 421 AAAGTTGCAA TTCGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GTGCATTGAT 481 GACCCATGTT TGGCCTCGAT CAAGACGTCG ACCACCGCCT ATTGGGGTCG ACGCCGCCCA 541 GACGGTGTAT GGACAGTTGT TGCGTACCTC GAAAGTGGCA GCATAAGTGT AAGTCACAAA 601 AGCAAGAAGG AAGAAAACAA AAGAAGATCT CA Predicted gene structure (within gDNA segment 39391 to 42528): Exon 1 40982 41613 ( 632 n); cDNA 1 632 ( 632 n); score: 0.900 MATCH C08HBa0235H18.1+ SGN-E302616- 0.900 632 1.000 C PGS_C08HBa0235H18.1+_SGN-E302616- (40982 41613) Alignment (genomic DNA sequence = upper lines): AGGGCAAGTG AATAAGCTAG TAGGATCATC TTGAGGGTAG CTATACGCAT TAGGGCACCT 41041 ||||||||| ||| ||||| |||||||||| || |||||| |||||||||| ||| || || AGGGCAAGTA AATGTGCTAG TAGGATCATC CTGTGGGTAG CTATACGCAT CAGGACATCT 60 TTGTTTGAAA AATCTCGAAA ATTTTGTAGG ACCACATGGG CCTTGAGTAC AACAATATTG 41101 |||||| | |||| ||| | | | ||||| |||||||| ||||| || | |||||||||| CTGTTTGCAC AATCCCGACA AATCAGTAGG GCCACATGGA CCTTGTGTGC AACAATATTG 120 TTGTCCTCCG AACGTGGTAC AAGGGTTGTT ACATCCTCCG GGTACCCTAA GTGGACTAGG 41161 |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| ||| || ||| TTGTCCTCCG AACGTGGTAC AAGGATTGTT ACATCCTCCG GGTACCCTAA GTGAACCAGG 180 GCATTCACCG TTTATATTAG CCGTGCAATG AATTGCATGG CATTTTCCTC CACTAGGATT 41221 |||||||| |||||||||| |||| ||||| |||||||||| ||||| |||| |||||||||| ACATTCACCA TTTATATTAG CCGTACAATG AATTGCATGG CATTTCCCTC CACTAGGATT 240 GGTTGGGGCG AAAGTCATCG GTATATTAAA TCCGTCAACC AAAGAAATGT CCCAGAAATC 41281 ||| |||||| |||||||| | | |||||||| ||| || || |||||||||| |||||||||| GGTCGGGGCG AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC 300 TAGGTTGCTG AATTGGTCCA AAGCATATTC AGCTAGGGTG TTTGGGGGTT TGCCCCACCC 41341 ||||||||| || ||||||| | || || || || |||||| ||||| |||| |||||||||| TAGGTTGCTA AACTGGTCCA AGGCGTACTC GGCCAGGGTG TTTGGTGGTT TGCCCCACCC 360 GGTACAGTGT AGGACCCCAC CACAATCACC AGTTTGGCAT GAACCTCTAC CAGCACCATT 41401 |||||| || | |||||||| |||||||||| ||| || ||| |||||||||| ||||||||| GGTACATTGC AAGACCCCAC CACAATCACC AGTCTGACAT GAACCTCTAC CAGCACCATC 420 AAAATTGCAA TTAGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GCGCATTGAT 41461 ||| |||||| || ||||||| |||||||||| |||||||||| |||||||||| | |||||||| AAAGTTGCAA TTCGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GTGCATTGAT 480 GACCCATGTT TGGCCTCGAT CGAGACGTCG ACCACCGCCT ATCGGGGTCG ATGCTGCCCA 41521 |||||||||| |||||||||| | |||||||| |||||||||| || ||||||| | || ||||| GACCCATGTT TGGCCTCGAT CAAGACGTCG ACCACCGCCT ATTGGGGTCG ACGCCGCCCA 540 AACGGTGTAG GGACAATTGT TGCGTACCTC GATAGTGGCA GCATAAGTGT AAGTCACTAA 41581 |||||||| ||||| |||| |||||||||| || ||||||| |||||||||| ||||||| || GACGGTGTAT GGACAGTTGT TGCGTACCTC GAAAGTGGCA GCATAAGTGT AAGTCACAAA 600 AGCAAGGAAG AAGAAAATAA AAGAAGATGT CA 41613 |||||| | | ||||||| || |||||||| | || AGCAAGAAGG AAGAAAACAA AAGAAGATCT CA 632 hqPGS_C08HBa0235H18.1+_SGN-E302616- (40982 41613) ******************************************************************************** EST sequence 799 -strand 632 n (File: SGN-E251623-) 1 AGGGCAAGTA AATGTGCTTG TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT 61 TTTCTTGAAA AATTTGGACA ACTCTGTAGG GCCACATGGA CCTTGGGTGC AACAATATTG 121 TTGTCCTCCA AACGTGGTAC AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG 181 ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT 241 TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC 301 TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC 361 GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 421 AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT 481 GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA 541 AACGGTGTAT GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAAGTAT AAGTCACACA 601 AAGAAGGAAG AAGAGACCAA AAGAAGATGT CA Predicted gene structure (within gDNA segment 39391 to 43176): Exon 1 40982 41613 ( 632 n); cDNA 1 632 ( 632 n); score: 0.875 MATCH C08HBa0235H18.1+ SGN-E251623- 0.875 632 1.000 C PGS_C08HBa0235H18.1+_SGN-E251623- (40982 41613) Alignment (genomic DNA sequence = upper lines): AGGGCAAGTG AATAAGCTAG TAGGATCATC TTGAGGGTAG CTATACGCAT TAGGGCACCT 41041 ||||||||| ||| ||| | ||||||| || ||| |||||| ||||| |||| || || || AGGGCAAGTA AATGTGCTTG TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT 60 TTGTTTGAAA AATCTCGAAA ATTTTGTAGG ACCACATGGG CCTTGAGTAC AACAATATTG 41101 || |||||| ||| | || | | | |||||| |||||||| ||||| || | |||||||||| TTTCTTGAAA AATTTGGACA ACTCTGTAGG GCCACATGGA CCTTGGGTGC AACAATATTG 120 TTGTCCTCCG AACGTGGTAC AAGGGTTGTT ACATCCTCCG GGTACCCTAA GTGGACTAGG 41161 ||||||||| |||||||||| |||||||||| ||||||||| |||||| ||| | | | ||| TTGTCCTCCA AACGTGGTAC AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG 180 GCATTCACCG TTTATATTAG CCGTGCAATG AATTGCATGG CATTTTCCTC CACTAGGATT 41221 |||||||| |||||||| | |||||||||| |||||| || |||||||||| ||||||| || ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT 240 GGTTGGGGCG AAAGTCATCG GTATATTAAA TCCGTCAACC AAAGAAATGT CCCAGAAATC 41281 |||||||| |||||||| | | |||||||| ||| || || |||||||||| |||| ||||| TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC 300 TAGGTTGCTG AATTGGTCCA AAGCATATTC AGCTAGGGTG TTTGGGGGTT TGCCCCACCC 41341 || |||||| || ||||||| | || || || ||||||||| |||||||||| ||||||| || TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC 360 GGTACAGTGT AGGACCCCAC CACAATCACC AGTTTGGCAT GAACCTCTAC CAGCACCATT 41401 |||||| ||| | ||| |||| |||||||||| ||| || ||| | |||||| | | ||| |||| GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 420 AAAATTGCAA TTAGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GCGCATTGAT 41461 ||| |||||| |||||||| |||||||||| |||||||||| || ||||||| | |||||||| AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT 480 GACCCATGTT TGGCCTCGAT CGAGACGTCG ACCACCGCCT ATCGGGGTCG ATGCTGCCCA 41521 |||||||||| |||||||||| ||||||||| |||||||||| ||||| |||| |||| ||||| GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA 540 AACGGTGTAG GGACAATTGT TGCGTACCTC GATAGTGGCA GCATAAGTGT AAGTCACTAA 41581 ||||||||| ||||| |||| |||||||||| ||||||||| |||||||| | ||||||| | AACGGTGTAT GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAAGTAT AAGTCACACA 600 AGCAAGGAAG AAGAAAATAA AAGAAGATGT CA 41613 | ||||||| |||| | || |||||||||| || AAGAAGGAAG AAGAGACCAA AAGAAGATGT CA 632 hqPGS_C08HBa0235H18.1+_SGN-E251623- (40982 41613) ******************************************************************************** EST sequence 974 -strand 611 n (File: SGN-E256710-) 1 AGGGCAAGTA AATGTGCTTG TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT 61 TTTCTTGAAA AATTTGGACA ACTCTGTAGG GCCACATGGA CCTTGGGTGC AACAATATTG 121 TTGTCCTCCA AACGTGGTAC AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG 181 ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT 241 TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC 301 TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC 361 GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 421 AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT 481 GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA 541 AACGGTGTAT GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAAGTAT AAGTCACACA 601 AAGAAGGAAG A Predicted gene structure (within gDNA segment 39391 to 42966): Exon 1 40982 41592 ( 611 n); cDNA 1 611 ( 611 n); score: 0.876 MATCH C08HBa0235H18.1+ SGN-E256710- 0.876 611 1.000 C PGS_C08HBa0235H18.1+_SGN-E256710- (40982 41592) Alignment (genomic DNA sequence = upper lines): AGGGCAAGTG AATAAGCTAG TAGGATCATC TTGAGGGTAG CTATACGCAT TAGGGCACCT 41041 ||||||||| ||| ||| | ||||||| || ||| |||||| ||||| |||| || || || AGGGCAAGTA AATGTGCTTG TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT 60 TTGTTTGAAA AATCTCGAAA ATTTTGTAGG ACCACATGGG CCTTGAGTAC AACAATATTG 41101 || |||||| ||| | || | | | |||||| |||||||| ||||| || | |||||||||| TTTCTTGAAA AATTTGGACA ACTCTGTAGG GCCACATGGA CCTTGGGTGC AACAATATTG 120 TTGTCCTCCG AACGTGGTAC AAGGGTTGTT ACATCCTCCG GGTACCCTAA GTGGACTAGG 41161 ||||||||| |||||||||| |||||||||| ||||||||| |||||| ||| | | | ||| TTGTCCTCCA AACGTGGTAC AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG 180 GCATTCACCG TTTATATTAG CCGTGCAATG AATTGCATGG CATTTTCCTC CACTAGGATT 41221 |||||||| |||||||| | |||||||||| |||||| || |||||||||| ||||||| || ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT 240 GGTTGGGGCG AAAGTCATCG GTATATTAAA TCCGTCAACC AAAGAAATGT CCCAGAAATC 41281 |||||||| |||||||| | | |||||||| ||| || || |||||||||| |||| ||||| TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC 300 TAGGTTGCTG AATTGGTCCA AAGCATATTC AGCTAGGGTG TTTGGGGGTT TGCCCCACCC 41341 || |||||| || ||||||| | || || || ||||||||| |||||||||| ||||||| || TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC 360 GGTACAGTGT AGGACCCCAC CACAATCACC AGTTTGGCAT GAACCTCTAC CAGCACCATT 41401 |||||| ||| | ||| |||| |||||||||| ||| || ||| | |||||| | | ||| |||| GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 420 AAAATTGCAA TTAGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GCGCATTGAT 41461 ||| |||||| |||||||| |||||||||| |||||||||| || ||||||| | |||||||| AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT 480 GACCCATGTT TGGCCTCGAT CGAGACGTCG ACCACCGCCT ATCGGGGTCG ATGCTGCCCA 41521 |||||||||| |||||||||| ||||||||| |||||||||| ||||| |||| |||| ||||| GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA 540 AACGGTGTAG GGACAATTGT TGCGTACCTC GATAGTGGCA GCATAAGTGT AAGTCACTAA 41581 ||||||||| ||||| |||| |||||||||| ||||||||| |||||||| | ||||||| | AACGGTGTAT GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAAGTAT AAGTCACACA 600 AGCAAGGAAG A 41592 | ||||||| | AAGAAGGAAG A 611 hqPGS_C08HBa0235H18.1+_SGN-E256710- (40982 41592) ******************************************************************************** EST sequence 750 -strand 659 n (File: SGN-E214263-) 1 AGGGGCAAGT AAATGTGCTA GTAGGATCAT CTTGTGGGTA GCTATACGCA TCAGGACATC 61 TTTGTTTGAA AATCTCGACA AATCAGTAGG GCCACATGGA CCTTGTGTGC AACAATATTG 121 TTGTCCTCCG AACGTGGTAC AAGGATTGTT ACATCCTCCG GGTACCNTAA GTGAACCAGG 181 ACATTCACCA TTTATATTAG CCGTACAATG AATTGCATGG CATTTCCCTC CACTAGGATT 241 GGTCGGGGCG AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC 301 TAGGTTGCTA AACTGGTCCA AGGCGTACTC GGCCAGGGTG TTTGGTGGTT TGCCCCACCC 361 GGTACATTGC AAGACCCCAC CACAATCACC AGTCTGACAT GAACCTCTAC CAGCACCATC 421 AAAGTTGCAA TTCGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GTGCATTGAT 481 GACCCATGTT TGGCCTCGAT CAAGACGTCG ACCACCGCCT ATTGGGGTCG ACGCCGCCCA 541 GACGGTGTAT GGACAGTTGT TGCGTACCTC GAAAGTGGCA GCATAAGTGT AAGTCACAAA 601 AGCAAGAAGG AAGAAAACAA AAGAAGATCT CAAGTAGGCC ATGTTTGTGG AACTATTTT Predicted gene structure (within gDNA segment 40227 to 42798): Exon 1 40983 41640 ( 658 n); cDNA 3 659 ( 657 n); score: 0.903 MATCH C08HBa0235H18.1+ SGN-E214263- 0.903 658 0.998 C PGS_C08HBa0235H18.1+_SGN-E214263- (40983 41640) Alignment (genomic DNA sequence = upper lines): GGGCAAGTGA ATAAGCTAGT AGGATCATCT TGAGGGTAGC TATACGCATT AGGGCACCTT 41042 |||||||| | || |||||| |||||||||| || ||||||| ||||||||| ||| || ||| GGGCAAGTAA ATGTGCTAGT AGGATCATCT TGTGGGTAGC TATACGCATC AGGACATCTT 62 TGTTTGAAAA ATCTCGAAAA TTTTGTAGGA CCACATGGGC CTTGAGTACA ACAATATTGT 41102 |||||| ||| ||||||| || | ||||| |||||||| | |||| || || |||||||||| TGTTTG-AAA ATCTCGACAA ATCAGTAGGG CCACATGGAC CTTGTGTGCA ACAATATTGT 121 TGTCCTCCGA ACGTGGTACA AGGGTTGTTA CATCCTCCGG GTACCCTAAG TGGACTAGGG 41162 |||||||||| |||||||||| ||| |||||| |||||||||| ||||| |||| || || ||| TGTCCTCCGA ACGTGGTACA AGGATTGTTA CATCCTCCGG GTACCNTAAG TGAACCAGGA 181 CATTCACCGT TTATATTAGC CGTGCAATGA ATTGCATGGC ATTTTCCTCC ACTAGGATTG 41222 |||||||| | |||||||||| ||| |||||| |||||||||| |||| ||||| |||||||||| CATTCACCAT TTATATTAGC CGTACAATGA ATTGCATGGC ATTTCCCTCC ACTAGGATTG 241 GTTGGGGCGA AAGTCATCGG TATATTAAAT CCGTCAACCA AAGAAATGTC CCAGAAATCT 41282 || ||||||| ||||||| || ||||||||| || || || | |||||||||| |||||||||| GTCGGGGCGA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAGAAATCT 301 AGGTTGCTGA ATTGGTCCAA AGCATATTCA GCTAGGGTGT TTGGGGGTTT GCCCCACCCG 41342 |||||||| | | |||||||| || || || || ||||||| |||| ||||| |||||||||| AGGTTGCTAA ACTGGTCCAA GGCGTACTCG GCCAGGGTGT TTGGTGGTTT GCCCCACCCG 361 GTACAGTGTA GGACCCCACC ACAATCACCA GTTTGGCATG AACCTCTACC AGCACCATTA 41402 ||||| || | ||||||||| |||||||||| || || |||| |||||||||| |||||||| | GTACATTGCA AGACCCCACC ACAATCACCA GTCTGACATG AACCTCTACC AGCACCATCA 421 AAATTGCAAT TAGTACGACC CCATATACGT GCCATCTTAG TGCCCCTCGG CGCATTGATG 41462 || ||||||| | |||||||| |||||||||| |||||||||| |||||||||| ||||||||| AAGTTGCAAT TCGTACGACC CCATATACGT GCCATCTTAG TGCCCCTCGG TGCATTGATG 481 ACCCATGTTT GGCCTCGATC GAGACGTCGA CCACCGCCTA TCGGGGTCGA TGCTGCCCAA 41522 |||||||||| |||||||||| ||||||||| |||||||||| | |||||||| || ||||| ACCCATGTTT GGCCTCGATC AAGACGTCGA CCACCGCCTA TTGGGGTCGA CGCCGCCCAG 541 ACGGTGTAGG GACAATTGTT GCGTACCTCG ATAGTGGCAG CATAAGTGTA AGTCACTAAA 41582 |||||||| | |||| ||||| |||||||||| | |||||||| |||||||||| |||||| ||| ACGGTGTATG GACAGTTGTT GCGTACCTCG AAAGTGGCAG CATAAGTGTA AGTCACAAAA 601 GCAAGGAAGA AGAAAATAAA AGAAGATGTC AAGTAGCCCA TGTTTGTGTA CATATTTT 41640 ||||| | || |||||| ||| ||||||| || |||||| ||| |||||||| | |||||| GCAAGAAGGA AGAAAACAAA AGAAGATCTC AAGTAGGCCA TGTTTGTGGA ACTATTTT 659 hqPGS_C08HBa0235H18.1+_SGN-E214263- (40983 41640) ******************************************************************************** EST sequence 455 -strand 645 n (File: SGN-E211803-) 1 GGGCAAGTAA ATGTGCTNGT AGGATCGTCT NGTGGGTAGC TATAAGCATC GGGACATCTT 61 TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 121 TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 181 CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 241 GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 301 AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 361 GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 421 AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 481 ACCCATGTTT GGCCTCGATT GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA 541 ACGGTGTATG GACAGTTGTT GCGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACACAA 601 AGAAGGAAGA AGAGAACAAA AGAAGATGTC AAGTAGCCCA TGTTT Predicted gene structure (within gDNA segment 39401 to 43316): Exon 1 40983 41627 ( 645 n); cDNA 1 645 ( 645 n); score: 0.878 MATCH C08HBa0235H18.1+ SGN-E211803- 0.878 645 1.000 C PGS_C08HBa0235H18.1+_SGN-E211803- (40983 41627) Alignment (genomic DNA sequence = upper lines): GGGCAAGTGA ATAAGCTAGT AGGATCATCT TGAGGGTAGC TATACGCATT AGGGCACCTT 41042 |||||||| | || ||| || |||||| ||| | ||||||| |||| |||| || || ||| GGGCAAGTAA ATGTGCTNGT AGGATCGTCT NGTGGGTAGC TATAAGCATC GGGACATCTT 60 TGTTTGAAAA ATCTCGAAAA TTTTGTAGGA CCACATGGGC CTTGAGTACA ACAATATTGT 41102 | ||||||| || | || || | |||||| |||||||| | |||| || || |||||||||| TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 120 TGTCCTCCGA ACGTGGTACA AGGGTTGTTA CATCCTCCGG GTACCCTAAG TGGACTAGGG 41162 |||||||| | |||||||||| |||||||||| |||||||| | ||||| |||| | | ||| TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 180 CATTCACCGT TTATATTAGC CGTGCAATGA ATTGCATGGC ATTTTCCTCC ACTAGGATTG 41222 |||||||| | ||||||| || |||||||||| ||||| || | |||||||||| |||||| || CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 240 GTTGGGGCGA AAGTCATCGG TATATTAAAT CCGTCAACCA AAGAAATGTC CCAGAAATCT 41282 |||||||| | ||||||| || ||||||||| || || || | |||||||||| ||| |||||| GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 300 AGGTTGCTGA ATTGGTCCAA AGCATATTCA GCTAGGGTGT TTGGGGGTTT GCCCCACCCG 41342 | |||||| | | |||||||| || || || |||||||||| |||||||||| |||||| ||| AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 360 GTACAGTGTA GGACCCCACC ACAATCACCA GTTTGGCATG AACCTCTACC AGCACCATTA 41402 ||||| |||| ||| ||||| |||||||||| || || |||| |||||| || ||| ||||| GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 420 AAATTGCAAT TAGTACGACC CCATATACGT GCCATCTTAG TGCCCCTCGG CGCATTGATG 41462 || |||||| ||||||||| |||||||||| |||||||||| | |||||||| ||||||||| AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 480 ACCCATGTTT GGCCTCGATC GAGACGTCGA CCACCGCCTA TCGGGGTCGA TGCTGCCCAA 41522 |||||||||| ||||||||| |||||||||| |||||||||| |||| ||||| ||| |||||| ACCCATGTTT GGCCTCGATT GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA 540 ACGGTGTAGG GACAATTGTT GCGTACCTCG ATAGTGGCAG CATAAGTGTA AGTCACTAAA 41582 |||||||| | |||| ||||| ||||||||| |||||||||| ||||||| || |||||| || ACGGTGTATG GACAGTTGTT GCGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACACAA 600 GCAAGGAAGA AGAAAATAAA AGAAGATGTC AAGTAGCCCA TGTTT 41627 |||||||| ||| || ||| |||||||||| |||||||||| ||||| AGAAGGAAGA AGAGAACAAA AGAAGATGTC AAGTAGCCCA TGTTT 645 hqPGS_C08HBa0235H18.1+_SGN-E211803- (40983 41627) ******************************************************************************** EST sequence 525 -strand 636 n (File: SGN-E211072-) 1 GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 61 TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 121 TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 181 CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 241 GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 301 AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 361 GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 421 AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 481 ACCCATGTTT GGCCTCGATT GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA 541 ACGGTGTATG GACAGTTGTT GCGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACACAA 601 AGAAGGAAGA AGAGAACAAA AGAAGATGTC AAGTAG Predicted gene structure (within gDNA segment 39401 to 43226): Exon 1 40983 41618 ( 636 n); cDNA 1 636 ( 636 n); score: 0.877 MATCH C08HBa0235H18.1+ SGN-E211072- 0.877 636 1.000 C PGS_C08HBa0235H18.1+_SGN-E211072- (40983 41618) Alignment (genomic DNA sequence = upper lines): GGGCAAGTGA ATAAGCTAGT AGGATCATCT TGAGGGTAGC TATACGCATT AGGGCACCTT 41042 |||||||| | || ||| || |||||| ||| || ||||||| |||| |||| || || ||| GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 60 TGTTTGAAAA ATCTCGAAAA TTTTGTAGGA CCACATGGGC CTTGAGTACA ACAATATTGT 41102 | ||||||| || | || || | |||||| |||||||| | |||| || || |||||||||| TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 120 TGTCCTCCGA ACGTGGTACA AGGGTTGTTA CATCCTCCGG GTACCCTAAG TGGACTAGGG 41162 |||||||| | |||||||||| |||||||||| |||||||| | ||||| |||| | | ||| TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 180 CATTCACCGT TTATATTAGC CGTGCAATGA ATTGCATGGC ATTTTCCTCC ACTAGGATTG 41222 |||||||| | ||||||| || |||||||||| ||||| || | |||||||||| |||||| || CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 240 GTTGGGGCGA AAGTCATCGG TATATTAAAT CCGTCAACCA AAGAAATGTC CCAGAAATCT 41282 |||||||| | ||||||| || ||||||||| || || || | |||||||||| ||| |||||| GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 300 AGGTTGCTGA ATTGGTCCAA AGCATATTCA GCTAGGGTGT TTGGGGGTTT GCCCCACCCG 41342 | |||||| | | |||||||| || || || |||||||||| |||||||||| |||||| ||| AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 360 GTACAGTGTA GGACCCCACC ACAATCACCA GTTTGGCATG AACCTCTACC AGCACCATTA 41402 ||||| |||| ||| ||||| |||||||||| || || |||| |||||| || ||| ||||| GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 420 AAATTGCAAT TAGTACGACC CCATATACGT GCCATCTTAG TGCCCCTCGG CGCATTGATG 41462 || |||||| ||||||||| |||||||||| |||||||||| | |||||||| ||||||||| AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 480 ACCCATGTTT GGCCTCGATC GAGACGTCGA CCACCGCCTA TCGGGGTCGA TGCTGCCCAA 41522 |||||||||| ||||||||| |||||||||| |||||||||| |||| ||||| ||| |||||| ACCCATGTTT GGCCTCGATT GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA 540 ACGGTGTAGG GACAATTGTT GCGTACCTCG ATAGTGGCAG CATAAGTGTA AGTCACTAAA 41582 |||||||| | |||| ||||| ||||||||| |||||||||| ||||||| || |||||| || ACGGTGTATG GACAGTTGTT GCGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACACAA 600 GCAAGGAAGA AGAAAATAAA AGAAGATGTC AAGTAG 41618 |||||||| ||| || ||| |||||||||| |||||| AGAAGGAAGA AGAGAACAAA AGAAGATGTC AAGTAG 636 hqPGS_C08HBa0235H18.1+_SGN-E211072- (40983 41618) ******************************************************************************** EST sequence 584 -strand 630 n (File: SGN-E213091-) 1 GGGCAAGTAA ATGTGCTNGT AGGATCGTCT GTGGGTAGCT ATAAGCATCG GGACATCTTT 61 TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT 121 GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC 181 ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG 241 TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA 301 AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG 361 TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA 421 AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA 481 CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA 541 CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA 601 GAAGGAAGAA GAGAACAAAA GAAGATGTCA Predicted gene structure (within gDNA segment 39411 to 43176): Exon 1 40983 41613 ( 631 n); cDNA 1 630 ( 630 n); score: 0.875 MATCH C08HBa0235H18.1+ SGN-E213091- 0.875 631 1.002 C PGS_C08HBa0235H18.1+_SGN-E213091- (40983 41613) Alignment (genomic DNA sequence = upper lines): GGGCAAGTGA ATAAGCTAGT AGGATCATCT TGAGGGTAGC TATACGCATT AGGGCACCTT 41042 |||||||| | || ||| || |||||| || || ||||||| |||| |||| || || ||| GGGCAAGTAA ATGTGCTNGT AGGATCGTC- TGTGGGTAGC TATAAGCATC GGGACATCTT 59 TGTTTGAAAA ATCTCGAAAA TTTTGTAGGA CCACATGGGC CTTGAGTACA ACAATATTGT 41102 | ||||||| || | || || | |||||| |||||||| | |||| || || |||||||||| TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 119 TGTCCTCCGA ACGTGGTACA AGGGTTGTTA CATCCTCCGG GTACCCTAAG TGGACTAGGG 41162 |||||||| | |||||||||| |||||||||| |||||||| | ||||| |||| | | ||| TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 179 CATTCACCGT TTATATTAGC CGTGCAATGA ATTGCATGGC ATTTTCCTCC ACTAGGATTG 41222 |||||||| | ||||||| || |||||||||| ||||| || | |||||||||| |||||| || CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 239 GTTGGGGCGA AAGTCATCGG TATATTAAAT CCGTCAACCA AAGAAATGTC CCAGAAATCT 41282 |||||||| | ||||||| || ||||||||| || || || | |||||||||| ||| |||||| GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 299 AGGTTGCTGA ATTGGTCCAA AGCATATTCA GCTAGGGTGT TTGGGGGTTT GCCCCACCCG 41342 | |||||| | | |||||||| || || || |||||||||| |||||||||| |||||| ||| AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 359 GTACAGTGTA GGACCCCACC ACAATCACCA GTTTGGCATG AACCTCTACC AGCACCATTA 41402 ||||| |||| ||| ||||| |||||||||| || || |||| |||||| || ||| ||||| GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 419 AAATTGCAAT TAGTACGACC CCATATACGT GCCATCTTAG TGCCCCTCGG CGCATTGATG 41462 || |||||| ||||||||| |||||||||| |||||||||| | |||||||| ||||||||| AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 479 ACCCATGTTT GGCCTCGATC GAGACGTCGA CCACCGCCTA TCGGGGTCGA TGCTGCCCAA 41522 |||||||||| ||||||||| |||||||||| |||||||||| |||| ||||| ||| |||||| ACCCATGTTT GGCCTCGATT GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA 539 ACGGTGTAGG GACAATTGTT GCGTACCTCG ATAGTGGCAG CATAAGTGTA AGTCACTAAA 41582 |||||||| | |||| ||||| ||||||||| |||||||||| ||||||| || |||||| || ACGGTGTATG GACAGTTGTT GCGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACACAA 599 GCAAGGAAGA AGAAAATAAA AGAAGATGTC A 41613 |||||||| ||| || ||| |||||||||| | AGAAGGAAGA AGAGAACAAA AGAAGATGTC A 630 hqPGS_C08HBa0235H18.1+_SGN-E213091- (40983 41613) ******************************************************************************** EST sequence 466 -strand 617 n (File: SGN-E211417-) 1 GGGCAAGTAA ATGTGCTGTA GGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTA 61 TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGATC CTTGGGTGCA ACAATATTGT 121 TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 181 CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 241 GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 301 AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 361 GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 421 AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 481 ACCCATGTTT GGCCTCGATT GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA 541 ACGGTGTATG GACAGTTGTT GCGTAAATCA ATAGTGGCAG CATAAGTATA AGTCACACAA 601 AGAAGGAAGA AGAGAAC Predicted gene structure (within gDNA segment 39401 to 43036): Exon 1 40983 41598 ( 616 n); cDNA 1 616 ( 616 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E211417- 0.864 616 0.998 C PGS_C08HBa0235H18.1+_SGN-E211417- (40983 41598) Alignment (genomic DNA sequence = upper lines): GGGCAAGTGA ATAAGCTAGT AGGATCATCT TGAGGGTAGC TATACGCATT AGGGCACCTT 41042 |||||||| | || ||| ||||| ||| || ||||||| |||| |||| || || || GGGCAAGTAA ATGTGCTGTA GGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTA 60 TGTTTGAAAA ATCTCGAAAA TTTTGTAGGA CCACATGGGC CTTGAGTACA ACAATATTGT 41102 | ||||||| || | || || | |||||| ||||||| | |||| || || |||||||||| TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGATC CTTGGGTGCA ACAATATTGT 120 TGTCCTCCGA ACGTGGTACA AGGGTTGTTA CATCCTCCGG GTACCCTAAG TGGACTAGGG 41162 |||||||| | |||||||||| |||||||||| |||||||| | ||||| |||| | | ||| TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 180 CATTCACCGT TTATATTAGC CGTGCAATGA ATTGCATGGC ATTTTCCTCC ACTAGGATTG 41222 |||||||| | ||||||| || |||||||||| ||||| || | |||||||||| |||||| || CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 240 GTTGGGGCGA AAGTCATCGG TATATTAAAT CCGTCAACCA AAGAAATGTC CCAGAAATCT 41282 |||||||| | ||||||| || ||||||||| || || || | |||||||||| ||| |||||| GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 300 AGGTTGCTGA ATTGGTCCAA AGCATATTCA GCTAGGGTGT TTGGGGGTTT GCCCCACCCG 41342 | |||||| | | |||||||| || || || |||||||||| |||||||||| |||||| ||| AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 360 GTACAGTGTA GGACCCCACC ACAATCACCA GTTTGGCATG AACCTCTACC AGCACCATTA 41402 ||||| |||| ||| ||||| |||||||||| || || |||| |||||| || ||| ||||| GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 420 AAATTGCAAT TAGTACGACC CCATATACGT GCCATCTTAG TGCCCCTCGG CGCATTGATG 41462 || |||||| ||||||||| |||||||||| |||||||||| | |||||||| ||||||||| AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 480 ACCCATGTTT GGCCTCGATC GAGACGTCGA CCACCGCCTA TCGGGGTCGA TGCTGCCCAA 41522 |||||||||| ||||||||| |||||||||| |||||||||| |||| ||||| ||| |||||| ACCCATGTTT GGCCTCGATT GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA 540 ACGGTGTAGG GACAATTGTT GCGTACCTCG ATAGTGGCAG CATAAGTGTA AGTCACTAAA 41582 |||||||| | |||| ||||| ||||| || |||||||||| ||||||| || |||||| || ACGGTGTATG GACAGTTGTT GCGTAAATCA ATAGTGGCAG CATAAGTATA AGTCACACAA 600 GCAAGGAAGA AGAAAA 41598 |||||||| ||| || AGAAGGAAGA AGAGAA 616 hqPGS_C08HBa0235H18.1+_SGN-E211417- (40983 41598) ******************************************************************************** EST sequence 579 -strand 464 n (File: SGN-E201711-) 1 GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 61 TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 121 TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 181 CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 241 GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 301 AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 361 GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 421 AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCC Predicted gene structure (within gDNA segment 39401 to 42073): Exon 1 40983 41446 ( 464 n); cDNA 1 464 ( 464 n); score: 0.862 MATCH C08HBa0235H18.1+ SGN-E201711- 0.862 464 1.000 C PGS_C08HBa0235H18.1+_SGN-E201711- (40983 41446) Alignment (genomic DNA sequence = upper lines): GGGCAAGTGA ATAAGCTAGT AGGATCATCT TGAGGGTAGC TATACGCATT AGGGCACCTT 41042 |||||||| | || ||| || |||||| ||| || ||||||| |||| |||| || || ||| GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 60 TGTTTGAAAA ATCTCGAAAA TTTTGTAGGA CCACATGGGC CTTGAGTACA ACAATATTGT 41102 | ||||||| || | || || | |||||| |||||||| | |||| || || |||||||||| TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 120 TGTCCTCCGA ACGTGGTACA AGGGTTGTTA CATCCTCCGG GTACCCTAAG TGGACTAGGG 41162 |||||||| | |||||||||| |||||||||| |||||||| | ||||| |||| | | ||| TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 180 CATTCACCGT TTATATTAGC CGTGCAATGA ATTGCATGGC ATTTTCCTCC ACTAGGATTG 41222 |||||||| | ||||||| || |||||||||| ||||| || | |||||||||| |||||| || CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 240 GTTGGGGCGA AAGTCATCGG TATATTAAAT CCGTCAACCA AAGAAATGTC CCAGAAATCT 41282 |||||||| | ||||||| || ||||||||| || || || | |||||||||| ||| |||||| GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 300 AGGTTGCTGA ATTGGTCCAA AGCATATTCA GCTAGGGTGT TTGGGGGTTT GCCCCACCCG 41342 | |||||| | | |||||||| || || || |||||||||| |||||||||| |||||| ||| AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 360 GTACAGTGTA GGACCCCACC ACAATCACCA GTTTGGCATG AACCTCTACC AGCACCATTA 41402 ||||| |||| ||| ||||| |||||||||| || || |||| |||||| || ||| ||||| GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 420 AAATTGCAAT TAGTACGACC CCATATACGT GCCATCTTAG TGCC 41446 || |||||| ||||||||| |||||||||| |||||||||| | || AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCC 464 hqPGS_C08HBa0235H18.1+_SGN-E201711- (40983 41446) ******************************************************************************** EST sequence 617 -strand 639 n (File: SGN-E335205-) 1 GGCAAGTAAA TGTGTTAGTA GGATCATCTT GTGGGTAGCT ATACGCATCA GGACATCTTT 61 GTTTGAAAAA TCTCGACAAA TCAGTAGGGC CACATGGACC TTGTGTGCAA CAATATTGTT 121 GTCCTCCGAA CGTGGTACAA GGATTGTTAC ATCCTCCGGG TACCCTAAGT GAACCAGGAC 181 ATTCACCATT TATATTAGCC GTACAATGAA TTGCATGGCA TTTCCCTCCA CTAGGATTGG 241 TCGGGGCGAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAGAAATCTA 301 GGTTGCTAAA CTGGTCCAAG GCGTACTCGG CCAGGGTGTT TGGTGGTTTG CCCCACCCGG 361 TACATTGCAA GACCCCACCA CAATCACCAG TCTGACATGA ACCTCTACCA GCACCATCAA 421 AGTTGCAATT CGTACGACCC CATATACGTG CCATCTTAGT GCCCCTCGGT GCATTGATGA 481 CCCATGTTTG GCCTCGATCA AGACGTCGAC CACCGCCTAT TGGGGTCGAC GCCGCCCAGA 541 CGGTGTATGG ACAGTTGTTG CGTACCTCGA AAGTGGCAGC ATAAGTGTAA GTCACAAAAG 601 CAAGAAGGAA GAAAACAAAA GAAGATCTCA AGTAGGCCA Predicted gene structure (within gDNA segment 40239 to 42618): Exon 1 40984 41622 ( 639 n); cDNA 1 639 ( 639 n); score: 0.906 MATCH C08HBa0235H18.1+ SGN-E335205- 0.906 639 1.000 C PGS_C08HBa0235H18.1+_SGN-E335205- (40984 41622) Alignment (genomic DNA sequence = upper lines): GGCAAGTGAA TAAGCTAGTA GGATCATCTT GAGGGTAGCT ATACGCATTA GGGCACCTTT 41043 ||||||| || | | ||||| |||||||||| | |||||||| |||||||| | || || |||| GGCAAGTAAA TGTGTTAGTA GGATCATCTT GTGGGTAGCT ATACGCATCA GGACATCTTT 60 GTTTGAAAAA TCTCGAAAAT TTTGTAGGAC CACATGGGCC TTGAGTACAA CAATATTGTT 41103 |||||||||| |||||| || | ||||| | ||||||| || ||| || ||| |||||||||| GTTTGAAAAA TCTCGACAAA TCAGTAGGGC CACATGGACC TTGTGTGCAA CAATATTGTT 120 GTCCTCCGAA CGTGGTACAA GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GGACTAGGGC 41163 |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| | || ||| | GTCCTCCGAA CGTGGTACAA GGATTGTTAC ATCCTCCGGG TACCCTAAGT GAACCAGGAC 180 ATTCACCGTT TATATTAGCC GTGCAATGAA TTGCATGGCA TTTTCCTCCA CTAGGATTGG 41223 ||||||| || |||||||||| || ||||||| |||||||||| ||| |||||| |||||||||| ATTCACCATT TATATTAGCC GTACAATGAA TTGCATGGCA TTTCCCTCCA CTAGGATTGG 240 TTGGGGCGAA AGTCATCGGT ATATTAAATC CGTCAACCAA AGAAATGTCC CAGAAATCTA 41283 | |||||||| |||||| || |||||||||| | || || || |||||||||| |||||||||| TCGGGGCGAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAGAAATCTA 300 GGTTGCTGAA TTGGTCCAAA GCATATTCAG CTAGGGTGTT TGGGGGTTTG CCCCACCCGG 41343 ||||||| || |||||||| || || || | | |||||||| ||| |||||| |||||||||| GGTTGCTAAA CTGGTCCAAG GCGTACTCGG CCAGGGTGTT TGGTGGTTTG CCCCACCCGG 360 TACAGTGTAG GACCCCACCA CAATCACCAG TTTGGCATGA ACCTCTACCA GCACCATTAA 41403 |||| || | |||||||||| |||||||||| | || ||||| |||||||||| ||||||| || TACATTGCAA GACCCCACCA CAATCACCAG TCTGACATGA ACCTCTACCA GCACCATCAA 420 AATTGCAATT AGTACGACCC CATATACGTG CCATCTTAGT GCCCCTCGGC GCATTGATGA 41463 | |||||||| ||||||||| |||||||||| |||||||||| ||||||||| |||||||||| AGTTGCAATT CGTACGACCC CATATACGTG CCATCTTAGT GCCCCTCGGT GCATTGATGA 480 CCCATGTTTG GCCTCGATCG AGACGTCGAC CACCGCCTAT CGGGGTCGAT GCTGCCCAAA 41523 |||||||||| ||||||||| |||||||||| |||||||||| |||||||| || ||||| | CCCATGTTTG GCCTCGATCA AGACGTCGAC CACCGCCTAT TGGGGTCGAC GCCGCCCAGA 540 CGGTGTAGGG ACAATTGTTG CGTACCTCGA TAGTGGCAGC ATAAGTGTAA GTCACTAAAG 41583 ||||||| || ||| |||||| |||||||||| ||||||||| |||||||||| ||||| |||| CGGTGTATGG ACAGTTGTTG CGTACCTCGA AAGTGGCAGC ATAAGTGTAA GTCACAAAAG 600 CAAGGAAGAA GAAAATAAAA GAAGATGTCA AGTAGCCCA 41622 |||| | ||| ||||| |||| |||||| ||| ||||| ||| CAAGAAGGAA GAAAACAAAA GAAGATCTCA AGTAGGCCA 639 hqPGS_C08HBa0235H18.1+_SGN-E335205- (40984 41622) ******************************************************************************** EST sequence 643 -strand 642 n (File: SGN-E212383-) 1 CAAGTAAATG TGCTGTAGGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC 61 TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT 121 CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT 181 TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT 241 GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG 301 TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA 361 CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG 421 TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC 481 CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG 541 GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT AAGTATAAGT CACACAAAGA 601 AGGAAGAAGA GAACAAAAGA AGATGTCAAG TAGCCCATGT TT Predicted gene structure (within gDNA segment 39431 to 43316): Exon 1 40986 41627 ( 642 n); cDNA 1 642 ( 642 n); score: 0.874 MATCH C08HBa0235H18.1+ SGN-E212383- 0.874 642 1.000 C PGS_C08HBa0235H18.1+_SGN-E212383- (40986 41627) Alignment (genomic DNA sequence = upper lines): CAAGTGAATA AGCTAGTAGG ATCATCTTGA GGGTAGCTAT ACGCATTAGG GCACCTTTGT 41045 ||||| ||| ||| || ||| ||||| |||||||||| | |||| || || |||| CAAGTAAATG TGCTGTAGGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC 60 TTGAAAAATC TCGAAAATTT TGTAGGACCA CATGGGCCTT GAGTACAACA ATATTGTTGT 41105 ||||||||| | || || | |||||| ||| ||||| |||| | || ||||| |||||||||| TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT 120 CCTCCGAACG TGGTACAAGG GTTGTTACAT CCTCCGGGTA CCCTAAGTGG ACTAGGGCAT 41165 ||||| |||| |||||||||| |||||||||| ||||| |||| || |||| | | ||| ||| CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT 180 TCACCGTTTA TATTAGCCGT GCAATGAATT GCATGGCATT TTCCTCCACT AGGATTGGTT 41225 ||||| |||| |||| ||||| |||||||||| || || |||| |||||||||| ||| || ||| TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT 240 GGGGCGAAAG TCATCGGTAT ATTAAATCCG TCAACCAAAG AAATGTCCCA GAAATCTAGG 41285 ||||| |||| |||| || || ||||||||| || || |||| |||||||||| ||||||| | GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG 300 TTGCTGAATT GGTCCAAAGC ATATTCAGCT AGGGTGTTTG GGGGTTTGCC CCACCCGGTA 41345 ||||| || | ||||||| || || || ||| |||||||||| |||||||||| ||| |||||| TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA 360 CAGTGTAGGA CCCCACCACA ATCACCAGTT TGGCATGAAC CTCTACCAGC ACCATTAAAA 41405 || |||| || | |||||||| ||||||||| || |||| || |||| || || | ||||||| CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG 420 TTGCAATTAG TACGACCCCA TATACGTGCC ATCTTAGTGC CCCTCGGCGC ATTGATGACC 41465 |||||| || |||||||||| |||||||||| |||||||| | ||||||| || |||||||||| TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC 480 CATGTTTGGC CTCGATCGAG ACGTCGACCA CCGCCTATCG GGGTCGATGC TGCCCAAACG 41525 |||||||||| |||||| ||| |||||||||| |||||||||| | |||||||| ||||||||| CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG 540 GTGTAGGGAC AATTGTTGCG TACCTCGATA GTGGCAGCAT AAGTGTAAGT CACTAAAGCA 41585 ||||| |||| | |||||||| |||||| ||| |||||||||| |||| ||||| ||| || | GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT AAGTATAAGT CACACAAAGA 600 AGGAAGAAGA AAATAAAAGA AGATGTCAAG TAGCCCATGT TT 41627 |||||||||| || |||||| |||||||||| |||||||||| || AGGAAGAAGA GAACAAAAGA AGATGTCAAG TAGCCCATGT TT 642 hqPGS_C08HBa0235H18.1+_SGN-E212383- (40986 41627) ******************************************************************************** EST sequence 564 -strand 655 n (File: SGN-E305774-) 1 GACAAGTAAA AGTACTTGTT GGATCGTCTT GAGGATAACT ATAGGCATCG GGACATCTTT 61 GTTTGAAAAA TCTTGACAAA TCGGTAGGAC CACATGGACC TTGAGTGCAA CAATATTGTT 121 GTCCTCCGAA TGTAGTACAA GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GAACCAGGGC 181 ATTCACCGTT TATATTAGCA ACACATTGAA TTGGATGACA TTTTCCCGGC CCAGGGTTAG 241 TTGGGCCGAA AGACATAGGG ATGTTGAATC CATCAATAAC AGAAATGTCC CAGAAATCTA 301 AGTTGCTAAA TTGATTCAAA GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT 361 TGCATTCCAA GACTCCACCA CAATCACCGG TCTGGCACCA ACCTCTACCA GCACCATCAA 421 AATTGCAATT AGTACGACCC CAAATACGTG CCATTTTGGT GCCCGGTGGA GCCCAAAACC 481 ACCAACTTTG ACCTCTCTCG AGACGTCGGC CACCTCCTAC GGGAGTCGCC GCTGCCCATA 541 CGGTGTATGG ACAGTTGTTA TGGACCTCAA ATACACCGGA AGCATAAGTG TAAGTCACAA 601 AGGCAAGGAG AAACAACACT AAACAAGTTG TCAAATGACT CATTATAGAA TAAAA Predicted gene structure (within gDNA segment 39168 to 44155): Exon 1 40986 41623 ( 638 n); cDNA 3 643 ( 641 n); score: 0.795 Intron 1 41624 41755 ( 132 n); Pd: 0.464 (s: 0.72), Pa: 0.000 (s: 0) Exon 2 41756 41767 ( 12 n); cDNA 644 655 ( 12 n); score: 0.833 MATCH C08HBa0235H18.1+ SGN-E305774- 0.795 650 0.992 C PGS_C08HBa0235H18.1+_SGN-E305774- (40986 41623,41756 41767) Alignment (genomic DNA sequence = upper lines): CAAGTGAATA AGCTAGTAGG ATCATCTTGA GGGTAGCTAT ACGCATTAGG GCACCTTTGT 41045 ||||| || || || || ||| |||||| || || |||| | |||| || || |||||| CAAGTAAAAG TACTTGTTGG ATCGTCTTGA GGATAACTAT AGGCATCGGG ACATCTTTGT 62 TTGAAAAATC TCGAAAATTT TGTAGGACCA CATGGGCCTT GAGTACAACA ATATTGTTGT 41105 |||||||||| | || || | ||||||||| ||||| |||| |||| ||||| |||||||||| TTGAAAAATC TTGACAAATC GGTAGGACCA CATGGACCTT GAGTGCAACA ATATTGTTGT 122 CCTCCGAACG TGGTACAAGG GTTGTTACAT CCTCCGGGTA CCCTAAGTGG ACTAGGGCAT 41165 |||||||| | | |||||||| |||||||||| |||||||||| ||||||||| || ||||||| CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA CCCTAAGTGA ACCAGGGCAT 182 TCACCGTTTA TATTAGCCGT GCAATGAATT GCATGGCATT TTCCTCCACT AGGATTGGTT 41225 |||||||||| ||||||| || |||||| | ||| |||| |||| | ||| || ||| TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT TTCCCGGCCC AGGGTTAGTT 242 GGGGCGAAAG TCATCGGTAT ATTAAATCCG TCAACCAAAG AAATGTCCCA GAAATCTAGG 41285 ||| |||||| ||| || || || ||||| |||| | || |||||||||| |||||||| | GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG AAATGTCCCA GAAATCTAAG 302 TTGCTGAATT GGTCCAAAGC ATATTCAGCT AGGGTGTTTG GGGGTTTGCC CCACCCGGTA 41345 ||||| |||| | | |||||| ||||||||| | |||||||| | ||||| || ||| || | TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG 362 CAGTGTAGGA CCCCACCACA ATCACCAGTT TGGCATGAAC CTCTACCAGC ACCATTAAAA 41405 || | | || | |||||||| |||||| || ||||| ||| |||||||||| ||||| |||| CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC CTCTACCAGC ACCATCAAAA 422 TTGCAATTAG TACGACCCCA TATACGTGCC ATCTTAGTGC CCCTCGGCGC ATTGATGACC 41465 |||||||||| |||||||||| ||||||||| || || |||| || || || | | TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC CCGGTGGAGC CCAAAACCAC 482 CATGTTTGGC CTCGATCGAG ACGTCGACCA CCGCCTATCG GGGTCGATGC TGCCCAAACG 41525 || |||| | ||| ||||| |||||| ||| || |||| | | |||| || |||||| ||| CAACTTTGAC CTCTCTCGAG ACGTCGGCCA CCTCCTACGG GAGTCGCCGC TGCCCATACG 542 GTGTAGGGAC AATTGTTGCG TACCTC-GAT --AGTGGCAG CATAAGTGTA AGTCACTAAA 41582 ||||| |||| | ||||| | ||||| || | || || |||||||||| |||||| || GTGTATGGAC AGTTGTTATG GACCTCAAAT ACACCGGAAG CATAAGTGTA AGTCACAAAG 602 GCAAGGAAGA AGAAAATAAA AGAAGATGTC AAGTAGCCCA TGTTTGTGTA CATATTTTTG 41642 ||||||| | | || | || | ||| |||| || | | || | GCAAGGAGAA ACAACACTAA ACAAGTTGTC AAATGACTCA T......... .......... 643 TTTATTTTTG ATATATAGTT ACATATTATT GGGTAGTTTA TATAGGGGTG TGACAACTTT 41702 .......... .......... .......... .......... .......... .......... 643 TGGCACCTTG CACATTTAGA ATTCCACTAT ATAAGTTGTG GAAATTTTTA CCATAAAGAA 41762 || |||| .......... .......... .......... .......... .......... ...TATAGAA 650 TTAAA 41767 | ||| TAAAA 655 hqPGS_C08HBa0235H18.1+_SGN-E305774- (40986 41623) ******************************************************************************** EST sequence 604 -strand 594 n (File: SGN-E303485-) 1 CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC 61 TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT 121 CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT 181 TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT 241 GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG 301 TTGCTAAACT GGTCCAAGGC GTACTCGGAT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA 361 CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG 421 TTGCAACCAG TACGACCCCA TATACGTGCC ATTTTAGTTC CCCTCGGAGC ATTGATGACC 481 CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATGG GAGTCGATCC CGCCCAAACG 541 GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT AAGTATAAGT CACA Predicted gene structure (within gDNA segment 39431 to 42863): Exon 1 40986 41578 ( 593 n); cDNA 1 593 ( 593 n); score: 0.872 MATCH C08HBa0235H18.1+ SGN-E303485- 0.872 593 0.998 C PGS_C08HBa0235H18.1+_SGN-E303485- (40986 41578) Alignment (genomic DNA sequence = upper lines): CAAGTGAATA AGCTAGTAGG ATCATCTTGA GGGTAGCTAT ACGCATTAGG GCACCTTTGT 41045 ||||| ||| ||| ||||| ||| ||||| |||||||||| | |||| || || |||| CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC 60 TTGAAAAATC TCGAAAATTT TGTAGGACCA CATGGGCCTT GAGTACAACA ATATTGTTGT 41105 ||||||||| | || || | |||||| ||| ||||| |||| | || ||||| |||||||||| TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT 120 CCTCCGAACG TGGTACAAGG GTTGTTACAT CCTCCGGGTA CCCTAAGTGG ACTAGGGCAT 41165 ||||| |||| |||||||||| |||||||||| ||||| |||| || |||| | | ||| ||| CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT 180 TCACCGTTTA TATTAGCCGT GCAATGAATT GCATGGCATT TTCCTCCACT AGGATTGGTT 41225 ||||| |||| |||| ||||| |||||||||| || || |||| |||||||||| ||| || ||| TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT 240 GGGGCGAAAG TCATCGGTAT ATTAAATCCG TCAACCAAAG AAATGTCCCA GAAATCTAGG 41285 ||||| |||| |||| || || ||||||||| || || |||| |||||||||| ||||||| | GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG 300 TTGCTGAATT GGTCCAAAGC ATATTCAGCT AGGGTGTTTG GGGGTTTGCC CCACCCGGTA 41345 ||||| || | ||||||| || || || | | |||||||||| |||||||||| ||| |||||| TTGCTAAACT GGTCCAAGGC GTACTCGGAT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA 360 CAGTGTAGGA CCCCACCACA ATCACCAGTT TGGCATGAAC CTCTACCAGC ACCATTAAAA 41405 || |||| || | |||||||| ||||||||| || |||| || |||| || || | ||||||| CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG 420 TTGCAATTAG TACGACCCCA TATACGTGCC ATCTTAGTGC CCCTCGGCGC ATTGATGACC 41465 |||||| || |||||||||| |||||||||| || ||||| | ||||||| || |||||||||| TTGCAACCAG TACGACCCCA TATACGTGCC ATTTTAGTTC CCCTCGGAGC ATTGATGACC 480 CATGTTTGGC CTCGATCGAG ACGTCGACCA CCGCCTATCG GGGTCGATGC TGCCCAAACG 41525 |||||||||| |||||| ||| |||||||||| |||||||| | | |||||| | ||||||||| CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATGG GAGTCGATCC CGCCCAAACG 540 GTGTAGGGAC AATTGTTGCG TACCTCGATA GTGGCAGCAT AAGTGTAAGT CAC 41578 ||||| |||| | |||||||| |||||| ||| |||||||||| |||| ||||| ||| GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT AAGTATAAGT CAC 593 hqPGS_C08HBa0235H18.1+_SGN-E303485- (40986 41578) ******************************************************************************** EST sequence 938 -strand 629 n (File: SGN-E276027-) 1 GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 61 AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 121 CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 181 CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 241 GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 301 CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 361 TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 421 CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT 481 GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG 541 TATGGACAGT TGTTGCGTAC CTCAATAGTG GCAGCATAAG TATAAGTCAC ACAAAGAAGG 601 AAGAAGAGAA CAAAAGAAGA TGTCAAGTA Predicted gene structure (within gDNA segment 39461 to 43216): Exon 1 40989 41617 ( 629 n); cDNA 1 629 ( 629 n); score: 0.876 MATCH C08HBa0235H18.1+ SGN-E276027- 0.876 629 1.000 C PGS_C08HBa0235H18.1+_SGN-E276027- (40989 41617) Alignment (genomic DNA sequence = upper lines): GTGAATAAGC TAGTAGGATC ATCTTGAGGG TAGCTATACG CATTAGGGCA CCTTTGTTTG 41048 || ||| || | |||||||| ||||| ||| |||||||| | ||| || || |||| ||| GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 60 AAAAATCTCG AAAATTTTGT AGGACCACAT GGGCCTTGAG TACAACAATA TTGTTGTCCT 41108 |||||| | | | || | ||| ||| |||||| || ||||| | | |||||||| |||||||||| AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 120 CCGAACGTGG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGGACT AGGGCATTCA 41168 || ||||||| |||||||||| |||||||||| || |||||| |||| | | ||| |||||| CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 180 CCGTTTATAT TAGCCGTGCA ATGAATTGCA TGGCATTTTC CTCCACTAGG ATTGGTTGGG 41228 || ||||||| | |||||||| ||||||||| || ||||||| |||||||||| || |||||| CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 240 GCGAAAGTCA TCGGTATATT AAATCCGTCA ACCAAAGAAA TGTCCCAGAA ATCTAGGTTG 41288 || ||||||| | || ||||| |||||| || || ||||||| ||||||| || ||||| |||| GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 300 CTGAATTGGT CCAAAGCATA TTCAGCTAGG GTGTTTGGGG GTTTGCCCCA CCCGGTACAG 41348 || || |||| |||| || || || |||||| |||||||||| |||||||||| |||||||| CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 360 TGTAGGACCC CACCACAATC ACCAGTTTGG CATGAACCTC TACCAGCACC ATTAAAATTG 41408 |||| ||| | |||||||||| |||||| || |||| ||||| | || ||| | |||||| ||| TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 420 CAATTAGTAC GACCCCATAT ACGTGCCATC TTAGTGCCCC TCGGCGCATT GATGACCCAT 41468 ||| ||||| |||||||||| |||||||||| ||||| |||| |||| ||||| |||||||||| CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT 480 GTTTGGCCTC GATCGAGACG TCGACCACCG CCTATCGGGG TCGATGCTGC CCAAACGGTG 41528 |||||||||| ||| |||||| |||||||||| |||||||| | ||||||| || |||||||||| GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG 540 TAGGGACAAT TGTTGCGTAC CTCGATAGTG GCAGCATAAG TGTAAGTCAC TAAAGCAAGG 41588 || ||||| | |||||||||| ||| |||||| |||||||||| | |||||||| || |||| TATGGACAGT TGTTGCGTAC CTCAATAGTG GCAGCATAAG TATAAGTCAC ACAAAGAAGG 600 AAGAAGAAAA TAAAAGAAGA TGTCAAGTA 41617 ||||||| || ||||||||| ||||||||| AAGAAGAGAA CAAAAGAAGA TGTCAAGTA 629 hqPGS_C08HBa0235H18.1+_SGN-E276027- (40989 41617) ******************************************************************************** EST sequence 846 -strand 624 n (File: SGN-E307742-) 1 GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 61 AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 121 CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 181 CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 241 GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 301 CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 361 TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 421 CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT 481 GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG 541 TATGGACAGT TGTTGCGTAC CTCAATAGTG GCAGCATAAG TATAAGTCAC ACAAAGAAGG 601 AAGAAGAGAA CAAAAGAAGA TGTC Predicted gene structure (within gDNA segment 39461 to 43166): Exon 1 40989 41612 ( 624 n); cDNA 1 624 ( 624 n); score: 0.875 MATCH C08HBa0235H18.1+ SGN-E307742- 0.875 624 1.000 C PGS_C08HBa0235H18.1+_SGN-E307742- (40989 41612) Alignment (genomic DNA sequence = upper lines): GTGAATAAGC TAGTAGGATC ATCTTGAGGG TAGCTATACG CATTAGGGCA CCTTTGTTTG 41048 || ||| || | |||||||| ||||| ||| |||||||| | ||| || || |||| ||| GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 60 AAAAATCTCG AAAATTTTGT AGGACCACAT GGGCCTTGAG TACAACAATA TTGTTGTCCT 41108 |||||| | | | || | ||| ||| |||||| || ||||| | | |||||||| |||||||||| AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 120 CCGAACGTGG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGGACT AGGGCATTCA 41168 || ||||||| |||||||||| |||||||||| || |||||| |||| | | ||| |||||| CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 180 CCGTTTATAT TAGCCGTGCA ATGAATTGCA TGGCATTTTC CTCCACTAGG ATTGGTTGGG 41228 || ||||||| | |||||||| ||||||||| || ||||||| |||||||||| || |||||| CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 240 GCGAAAGTCA TCGGTATATT AAATCCGTCA ACCAAAGAAA TGTCCCAGAA ATCTAGGTTG 41288 || ||||||| | || ||||| |||||| || || ||||||| ||||||| || ||||| |||| GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 300 CTGAATTGGT CCAAAGCATA TTCAGCTAGG GTGTTTGGGG GTTTGCCCCA CCCGGTACAG 41348 || || |||| |||| || || || |||||| |||||||||| |||||||||| |||||||| CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 360 TGTAGGACCC CACCACAATC ACCAGTTTGG CATGAACCTC TACCAGCACC ATTAAAATTG 41408 |||| ||| | |||||||||| |||||| || |||| ||||| | || ||| | |||||| ||| TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 420 CAATTAGTAC GACCCCATAT ACGTGCCATC TTAGTGCCCC TCGGCGCATT GATGACCCAT 41468 ||| ||||| |||||||||| |||||||||| ||||| |||| |||| ||||| |||||||||| CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT 480 GTTTGGCCTC GATCGAGACG TCGACCACCG CCTATCGGGG TCGATGCTGC CCAAACGGTG 41528 |||||||||| ||| |||||| |||||||||| |||||||| | ||||||| || |||||||||| GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG 540 TAGGGACAAT TGTTGCGTAC CTCGATAGTG GCAGCATAAG TGTAAGTCAC TAAAGCAAGG 41588 || ||||| | |||||||||| ||| |||||| |||||||||| | |||||||| || |||| TATGGACAGT TGTTGCGTAC CTCAATAGTG GCAGCATAAG TATAAGTCAC ACAAAGAAGG 600 AAGAAGAAAA TAAAAGAAGA TGTC 41612 ||||||| || ||||||||| |||| AAGAAGAGAA CAAAAGAAGA TGTC 624 hqPGS_C08HBa0235H18.1+_SGN-E307742- (40989 41612) ******************************************************************************** EST sequence 739 -strand 604 n (File: SGN-E255554-) 1 GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 61 AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 121 CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 181 CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 241 GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 301 CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 361 TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 421 CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT 481 GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG 541 TATGGACAGT TGTTGCGTAC CTCAATAGTG GCAGCATAAG TATAAGTCAC ACAAAGAAGG 601 AAGA Predicted gene structure (within gDNA segment 39461 to 42966): Exon 1 40989 41592 ( 604 n); cDNA 1 604 ( 604 n); score: 0.874 MATCH C08HBa0235H18.1+ SGN-E255554- 0.874 604 1.000 C PGS_C08HBa0235H18.1+_SGN-E255554- (40989 41592) Alignment (genomic DNA sequence = upper lines): GTGAATAAGC TAGTAGGATC ATCTTGAGGG TAGCTATACG CATTAGGGCA CCTTTGTTTG 41048 || ||| || | |||||||| ||||| ||| |||||||| | ||| || || |||| ||| GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 60 AAAAATCTCG AAAATTTTGT AGGACCACAT GGGCCTTGAG TACAACAATA TTGTTGTCCT 41108 |||||| | | | || | ||| ||| |||||| || ||||| | | |||||||| |||||||||| AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 120 CCGAACGTGG TACAAGGGTT GTTACATCCT CCGGGTACCC TAAGTGGACT AGGGCATTCA 41168 || ||||||| |||||||||| |||||||||| || |||||| |||| | | ||| |||||| CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 180 CCGTTTATAT TAGCCGTGCA ATGAATTGCA TGGCATTTTC CTCCACTAGG ATTGGTTGGG 41228 || ||||||| | |||||||| ||||||||| || ||||||| |||||||||| || |||||| CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 240 GCGAAAGTCA TCGGTATATT AAATCCGTCA ACCAAAGAAA TGTCCCAGAA ATCTAGGTTG 41288 || ||||||| | || ||||| |||||| || || ||||||| ||||||| || ||||| |||| GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 300 CTGAATTGGT CCAAAGCATA TTCAGCTAGG GTGTTTGGGG GTTTGCCCCA CCCGGTACAG 41348 || || |||| |||| || || || |||||| |||||||||| |||||||||| |||||||| CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 360 TGTAGGACCC CACCACAATC ACCAGTTTGG CATGAACCTC TACCAGCACC ATTAAAATTG 41408 |||| ||| | |||||||||| |||||| || |||| ||||| | || ||| | |||||| ||| TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 420 CAATTAGTAC GACCCCATAT ACGTGCCATC TTAGTGCCCC TCGGCGCATT GATGACCCAT 41468 ||| ||||| |||||||||| |||||||||| ||||| |||| |||| ||||| |||||||||| CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT 480 GTTTGGCCTC GATCGAGACG TCGACCACCG CCTATCGGGG TCGATGCTGC CCAAACGGTG 41528 |||||||||| ||| |||||| |||||||||| |||||||| | ||||||| || |||||||||| GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG 540 TAGGGACAAT TGTTGCGTAC CTCGATAGTG GCAGCATAAG TGTAAGTCAC TAAAGCAAGG 41588 || ||||| | |||||||||| ||| |||||| |||||||||| | |||||||| || |||| TATGGACAGT TGTTGCGTAC CTCAATAGTG GCAGCATAAG TATAAGTCAC ACAAAGAAGG 600 AAGA 41592 |||| AAGA 604 hqPGS_C08HBa0235H18.1+_SGN-E255554- (40989 41592) ******************************************************************************** EST sequence 1001 -strand 463 n (File: SGN-E354546-) 1 AGTAGGATCA TCTGTGGGTA GCTATACGCA TCAGGACATC TTGTTTGAAA AATCTCGACA 61 AATCAGTAGG GCCACATGGA CCTTGTGTGC AACAATATTG TTGTCCTCCG AACGTGGTAC 121 AAGGATTGTT ACATCCTCCG GGGTACCCTA AGTGAACCAG GACATTCACC ATTTATATTA 181 GCCGTACAAT GAATTGCATG GCATTTCCCT CCACTAGGAT TGGTCGGGGC GAAAGTCATT 241 GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAGAAAT CTAGGTTGCT AAACTGGTCC 301 AAGGCGTACT CGGCCAGGGT GTTTGGTGGT TTGCCCCACC CGGTACATTG CAAGACCCCA 361 CCACAATCAC CAGTCTGACA TGAACCTCTA CCAGCACCAT CAAAGTTGCA ATTCGTACGA 421 CCCCATATAC GTGCCATCTT AGTGCCCCTC GGTGCATTGA TGA Predicted gene structure (within gDNA segment 40256 to 42162): Exon 1 41000 41463 ( 464 n); cDNA 1 463 ( 463 n); score: 0.900 MATCH C08HBa0235H18.1+ SGN-E354546- 0.900 464 1.002 C PGS_C08HBa0235H18.1+_SGN-E354546- (41000 41463) Alignment (genomic DNA sequence = upper lines): AGTAGGATCA TCTTGAGGGT AGCTATACGC ATTAGGGCAC CTTTGTTTGA AAAATCTCGA 41059 |||||||||| || || |||| |||||||||| || ||| || | |||||||| |||||||||| AGTAGGATCA TC-TGTGGGT AGCTATACGC ATCAGGACAT C-TTGTTTGA AAAATCTCGA 58 AAATTTTGTA GGACCACATG GGCCTTGAGT ACAACAATAT TGTTGTCCTC CGAACGTGGT 41119 || | ||| || ||||||| | ||||| || ||||||||| |||||||||| |||||||||| CAAATCAGTA GGGCCACATG GACCTTGTGT GCAACAATAT TGTTGTCCTC CGAACGTGGT 118 ACAAGGGTTG TTACATCCTC C-GGGTACCC TAAGTGGACT AGGGCATTCA CCGTTTATAT 41178 |||||| ||| |||||||||| | |||||||| |||||| || ||| |||||| || ||||||| ACAAGGATTG TTACATCCTC CGGGGTACCC TAAGTGAACC AGGACATTCA CCATTTATAT 178 TAGCCGTGCA ATGAATTGCA TGGCATTTTC CTCCACTAGG ATTGGTTGGG GCGAAAGTCA 41238 ||||||| || |||||||||| |||||||| | |||||||||| |||||| ||| |||||||||| TAGCCGTACA ATGAATTGCA TGGCATTTCC CTCCACTAGG ATTGGTCGGG GCGAAAGTCA 238 TCGGTATATT AAATCCGTCA ACCAAAGAAA TGTCCCAGAA ATCTAGGTTG CTGAATTGGT 41298 | || ||||| |||||| || || ||||||| |||||||||| |||||||||| || || |||| TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAGAA ATCTAGGTTG CTAAACTGGT 298 CCAAAGCATA TTCAGCTAGG GTGTTTGGGG GTTTGCCCCA CCCGGTACAG TGTAGGACCC 41358 |||| || || || || ||| |||||||| | |||||||||| ||||||||| || | ||||| CCAAGGCGTA CTCGGCCAGG GTGTTTGGTG GTTTGCCCCA CCCGGTACAT TGCAAGACCC 358 CACCACAATC ACCAGTTTGG CATGAACCTC TACCAGCACC ATTAAAATTG CAATTAGTAC 41418 |||||||||| |||||| || |||||||||| |||||||||| || ||| ||| ||||| |||| CACCACAATC ACCAGTCTGA CATGAACCTC TACCAGCACC ATCAAAGTTG CAATTCGTAC 418 GACCCCATAT ACGTGCCATC TTAGTGCCCC TCGGCGCATT GATGA 41463 |||||||||| |||||||||| |||||||||| |||| ||||| ||||| GACCCCATAT ACGTGCCATC TTAGTGCCCC TCGGTGCATT GATGA 463 hqPGS_C08HBa0235H18.1+_SGN-E354546- (41000 41463) ******************************************************************************** EST sequence 1192 -strand 619 n (File: SGN-E209843-) 1 TAACTATAGG CATCGGGACA TCTTTGTTTG AAAAATCTTG ACAAATCGGT AGGACCACAT 61 GGACCTTGAG TGCAACAATA TTGTTGTCCT CCGAATGTAG TACAAGGGTT GTTACATCCT 121 CCGGGTACCC TAAGTGAACC AGGGCATTCA CCGTTTATAT TAGCAACACA TTGAATTGGA 181 TGACATTTTC CCGGCCCAGG GTTAGTTGGG CCGAAAGACA TAGGGATGTT GAATCCATCA 241 ATAACAGAAA TGTCCCAGAA ATCTAAGTTG CTAAATTGAT TCAAAGCGTA TTCAGCTAAG 301 GTGTTTGGTG GTTTACCCCA TCCTTTGCAT TCCAAGACTC CACCACAATC ACCGGTCTGG 361 CACCAACCTC TACCAGCACC ATCAAAATTG CAATTAGTAC GACCCCAAAT ACGTGCCATT 421 TTGGTGCCCG GTGGAGCCCA AAACCACCAA CTTTGACCTC TCTCGAGACG TCGGCCACCT 481 CCTACGGGAG TCGCCGCTGC CCATACGGTG TATGGACAGT TGTTATGGAC CTCAAATACA 541 CCGGAAGCAT AAGTGTAAGT CACAAAGGCA AGGAGAAAGA ACACTAAACA AGTTGTCAAA 601 TGACTCATTT TAGAATAAA Predicted gene structure (within gDNA segment 39518 to 44145): Exon 1 41019 41632 ( 614 n); cDNA 1 617 ( 617 n); score: 0.797 MATCH C08HBa0235H18.1+ SGN-E209843- 0.797 614 0.992 C PGS_C08HBa0235H18.1+_SGN-E209843- (41019 41632) Alignment (genomic DNA sequence = upper lines): TAGCTATACG CATTAGGGCA CCTTTGTTTG AAAAATCTCG AAAATTTTGT AGGACCACAT 41078 || ||||| | ||| || || ||||||||| |||||||| | | || | || |||||||||| TAACTATAGG CATCGGGACA TCTTTGTTTG AAAAATCTTG ACAAATCGGT AGGACCACAT 60 GGGCCTTGAG TACAACAATA TTGTTGTCCT CCGAACGTGG TACAAGGGTT GTTACATCCT 41138 || ||||||| | |||||||| |||||||||| ||||| || | |||||||||| |||||||||| GGACCTTGAG TGCAACAATA TTGTTGTCCT CCGAATGTAG TACAAGGGTT GTTACATCCT 120 CCGGGTACCC TAAGTGGACT AGGGCATTCA CCGTTTATAT TAGCCGTGCA ATGAATTGCA 41198 |||||||||| |||||| || |||||||||| |||||||||| |||| || ||||||| | CCGGGTACCC TAAGTGAACC AGGGCATTCA CCGTTTATAT TAGCAACACA TTGAATTGGA 180 TGGCATTTTC CTCCACTAGG ATTGGTTGGG GCGAAAGTCA TCGGTATATT AAATCCGTCA 41258 || ||||||| | | ||| || |||||| |||||| || | || || || ||||| ||| TGACATTTTC CCGGCCCAGG GTTAGTTGGG CCGAAAGACA TAGGGATGTT GAATCCATCA 240 ACCAAAGAAA TGTCCCAGAA ATCTAGGTTG CTGAATTGGT CCAAAGCATA TTCAGCTAGG 41318 | | ||||| |||||||||| ||||| |||| || ||||| | |||||| || |||||||| | ATAACAGAAA TGTCCCAGAA ATCTAAGTTG CTAAATTGAT TCAAAGCGTA TTCAGCTAAG 300 GTGTTTGGGG GTTTGCCCCA CCCGGTACAG TGTAGGACCC CACCACAATC ACCAGTTTGG 41378 |||||||| | |||| ||||| || | || | | ||| | |||||||||| ||| || ||| GTGTTTGGTG GTTTACCCCA TCCTTTGCAT TCCAAGACTC CACCACAATC ACCGGTCTGG 360 CATGAACCTC TACCAGCACC ATTAAAATTG CAATTAGTAC GACCCCATAT ACGTGCCATC 41438 || |||||| |||||||||| || ||||||| |||||||||| ||||||| || ||||||||| CACCAACCTC TACCAGCACC ATCAAAATTG CAATTAGTAC GACCCCAAAT ACGTGCCATT 420 TTAGTGCCCC TCGGCGCATT GATGACCCAT GTTTGGCCTC GATCGAGACG TCGACCACCG 41498 || |||||| || || | ||| |||| |||| |||||||| ||| ||||| TTGGTGCCCG GTGGAGCCCA AAACCACCAA CTTTGACCTC TCTCGAGACG TCGGCCACCT 480 CCTATCGGGG TCGATGCTGC CCAAACGGTG TAGGGACAAT TGTTGCGTAC CTC-GATA-- 41555 |||| || | ||| ||||| ||| |||||| || ||||| | |||| | || ||| ||| CCTACGGGAG TCGCCGCTGC CCATACGGTG TATGGACAGT TGTTATGGAC CTCAAATACA 540 GTGGCAGCAT AAGTGTAAGT CACTAAAGCA AGGAAGAAGA AAATAAAAGA AGATGTCAAG 41615 || ||||| |||||||||| ||| || ||| |||| |||| | | ||| | || |||||| CCGGAAGCAT AAGTGTAAGT CACAAAGGCA AGGAGAAAGA ACACTAAACA AGTTGTCAAA 600 TAGCCCATGT TTGTGTA 41632 | | ||| | | | || TGACTCATTT TAGAATA 617 hqPGS_C08HBa0235H18.1+_SGN-E209843- (41019 41632) ******************************************************************************** EST sequence 481 -strand 530 n (File: SGN-E336261-) 1 ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 61 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 121 TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 181 TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 241 AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 301 TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT 361 ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT 421 TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT 481 CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA Predicted gene structure (within gDNA segment 39811 to 42576): Exon 1 41024 41551 ( 528 n); cDNA 1 528 ( 528 n); score: 0.879 MATCH C08HBa0235H18.1+ SGN-E336261- 0.879 528 0.996 C PGS_C08HBa0235H18.1+_SGN-E336261- (41024 41551) Alignment (genomic DNA sequence = upper lines): ATACGCATTA GGGCACCTTT GTTTGAAAAA TCTCGAAAAT TTTGTAGGAC CACATGGGCC 41083 ||| |||| || || |||| |||||||| | | || || | |||||| | ||||||| || ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 60 TTGAGTACAA CAATATTGTT GTCCTCCGAA CGTGGTACAA GGGTTGTTAC ATCCTCCGGG 41143 ||| || ||| |||||||||| ||||||| || |||||||||| |||||||||| ||||||| || TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 120 TACCCTAAGT GGACTAGGGC ATTCACCGTT TATATTAGCC GTGCAATGAA TTGCATGGCA 41203 |||| |||| | | ||| | ||||||| || |||||| ||| |||||||||| |||| || || TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 180 TTTTCCTCCA CTAGGATTGG TTGGGGCGAA AGTCATCGGT ATATTAAATC CGTCAACCAA 41263 |||||||||| ||||| || | ||||||| || |||||| || |||||||||| | || || || TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 240 AGAAATGTCC CAGAAATCTA GGTTGCTGAA TTGGTCCAAA GCATATTCAG CTAGGGTGTT 41323 |||||||||| || ||||||| |||||| || |||||||| || || || | |||||||||| AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 300 TGGGGGTTTG CCCCACCCGG TACAGTGTAG GACCCCACCA CAATCACCAG TTTGGCATGA 41383 |||||||||| ||||| |||| |||| |||| ||| |||||| |||||||||| | || |||| TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT 360 ACCTCTACCA GCACCATTAA AATTGCAATT AGTACGACCC CATATACGTG CCATCTTAGT 41443 |||||| || ||| |||||| | |||||| |||||||||| |||||||||| |||||||||| ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT 420 GCCCCTCGGC GCATTGATGA CCCATGTTTG GCCTCGATCG AGACGTCGAC CACCGCCTAT 41503 |||||||| |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT 480 CGGGGTCGAT GCTGCCCAAA CGGTGTAGGG ACAATTGTTG CGTACCTC 41551 ||| |||||| || ||||||| ||||||| || ||| |||||| |||||||| CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTC 528 hqPGS_C08HBa0235H18.1+_SGN-E336261- (41024 41551) ******************************************************************************** EST sequence 460 -strand 583 n (File: SGN-E211899-) 1 AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACTTT 61 GGGTGCAACA ATATTGTNGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 121 CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 181 TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 241 AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 301 GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 361 CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 421 CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 481 GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT 541 AAGTATAAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA AGA Predicted gene structure (within gDNA segment 36924 to 43126): Exon 1 41028 41608 ( 581 n); cDNA 3 583 ( 581 n); score: 0.874 MATCH C08HBa0235H18.1+ SGN-E211899- 0.874 581 0.997 C PGS_C08HBa0235H18.1+_SGN-E211899- (41028 41608) Alignment (genomic DNA sequence = upper lines): GCATTAGGGC ACCTTTGTTT GAAAAATCTC GAAAATTTTG TAGGACCACA TGGGCCTTGA 41087 |||| || | | |||| || ||||||| | || || | || |||| ||||| ||| | ||| GCATCGGGAC ATCTTTTCTT GAAAAATTTG GACAACTCTG TAGGGCCACA TGGACTTTGG 62 GTACAACAAT ATTGTTGTCC TCCGAACGTG GTACAAGGGT TGTTACATCC TCCGGGTACC 41147 || ||||||| ||||| |||| ||| |||||| |||||||||| |||||||||| ||| |||||| GTGCAACAAT ATTGTNGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC 122 CTAAGTGGAC TAGGGCATTC ACCGTTTATA TTAGCCGTGC AATGAATTGC ATGGCATTTT 41207 |||| | | ||| ||||| ||| |||||| || ||||||| |||||||||| || |||||| TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT 182 CCTCCACTAG GATTGGTTGG GGCGAAAGTC ATCGGTATAT TAAATCCGTC AACCAAAGAA 41267 |||||||||| | || ||||| ||| |||||| || || |||| ||||||| || || |||||| CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 242 ATGTCCCAGA AATCTAGGTT GCTGAATTGG TCCAAAGCAT ATTCAGCTAG GGTGTTTGGG 41327 |||||||| | |||||| ||| ||| || ||| ||||| || | | || ||||| |||||||||| ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG 302 GGTTTGCCCC ACCCGGTACA GTGTAGGACC CCACCACAAT CACCAGTTTG GCATGAACCT 41387 |||||||||| | |||||||| |||| ||| |||||||||| ||||||| || |||| |||| GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT 362 CTACCAGCAC CATTAAAATT GCAATTAGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC 41447 || || ||| ||||||| || |||| |||| |||||||||| |||||||||| |||||| ||| CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC 422 CTCGGCGCAT TGATGACCCA TGTTTGGCCT CGATCGAGAC GTCGACCACC GCCTATCGGG 41507 ||||| |||| |||||||||| |||||||||| |||| ||||| |||||||||| ||||||||| CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC GCCTATCGGA 482 GTCGATGCTG CCCAAACGGT GTAGGGACAA TTGTTGCGTA CCTCGATAGT GGCAGCATAA 41567 |||||||| | |||||||||| ||| ||||| |||||||||| |||| ||||| |||||||||| GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT GGCAGCATAA 542 GTGTAAGTCA CTAAAGCAAG GAAGAAGAAA ATAAAAGAAG A 41608 || ||||||| | || ||| |||||||| | | |||||||| | GTATAAGTCA CACAAAGAAG GAAGAAGAGA ACAAAAGAAG A 583 hqPGS_C08HBa0235H18.1+_SGN-E211899- (41028 41608) ******************************************************************************** EST sequence 953 -strand 597 n (File: SGN-E207039-) 1 TGTTTGAAAA AATCTTGACA AATCGGTAGG ACCACATGGA CCTTAAGTGC AACAATATTG 61 TTGTCCTCCG AATGTAGTAC AAGGGTTGTT ACATCCTCCG GGTACCCTAA GTGAACCAGG 121 GCATTCACCG TTTATATTAG CAACACATTG AATTGGATGA CATTTTCCCG GCCCAGGGTT 181 AGTTGGGCCG AAAGACATAG GGATGTTGAA TCCATCAATA ACAGAAATGT CCCAGAAATC 241 TAAGTTGCTA AATTGATTCA AAGCGTATTC AGCTAAGGTG TTTGGTGGTT TACCCCATCC 301 TTTGCATTCC AAGACTCCAC CACAATCACC GGTCTGGCAC CAACCTCTAC CAGCACCATC 361 AAAATTGCAA TTAGTACGAC CCCAAATACG TGCCATTTTG GTGCCCGGTG GAGCCCAAAA 421 CCACCAACTT TGACCTCTCT CGAGACGTCG GCCACCTCCT ACGGGAGTCG CCGCTGCCCA 481 TACGGTGTAT GGACAGTTGT TATGGACCTC AAATACACCG GAAGCATAAG TGTAAGTCAC 541 AAAGGCAAGG AGAAAGAACA CTAAACAAGT TGTCAAATGA CTCATTTTAG AATAAAA Predicted gene structure (within gDNA segment 39748 to 44155): Exon 1 41043 41632 ( 590 n); cDNA 1 594 ( 594 n); score: 0.793 MATCH C08HBa0235H18.1+ SGN-E207039- 0.793 590 0.988 C PGS_C08HBa0235H18.1+_SGN-E207039- (41043 41632) Alignment (genomic DNA sequence = upper lines): TGTTTGAAA- AATCTCGAAA ATTTTGTAGG ACCACATGGG CCTTGAGTAC AACAATATTG 41101 ||||||||| ||||| || | | | ||||| ||||||||| |||| ||| | |||||||||| TGTTTGAAAA AATCTTGACA AATCGGTAGG ACCACATGGA CCTTAAGTGC AACAATATTG 60 TTGTCCTCCG AACGTGGTAC AAGGGTTGTT ACATCCTCCG GGTACCCTAA GTGGACTAGG 41161 |||||||||| || || |||| |||||||||| |||||||||| |||||||||| ||| || ||| TTGTCCTCCG AATGTAGTAC AAGGGTTGTT ACATCCTCCG GGTACCCTAA GTGAACCAGG 120 GCATTCACCG TTTATATTAG CCGTGCAATG AATTGCATGG CATTTTCCTC CACTAGGATT 41221 |||||||||| |||||||||| | || || ||||| ||| |||||||| | ||| || GCATTCACCG TTTATATTAG CAACACATTG AATTGGATGA CATTTTCCCG GCCCAGGGTT 180 GGTTGGGGCG AAAGTCATCG GTATATTAAA TCCGTCAACC AAAGAAATGT CCCAGAAATC 41281 |||||| || |||| ||| | | || || || ||| |||| | |||||||| |||||||||| AGTTGGGCCG AAAGACATAG GGATGTTGAA TCCATCAATA ACAGAAATGT CCCAGAAATC 240 TAGGTTGCTG AATTGGTCCA AAGCATATTC AGCTAGGGTG TTTGGGGGTT TGCCCCACCC 41341 || |||||| ||||| | || |||| ||||| ||||| |||| ||||| |||| | ||||| || TAAGTTGCTA AATTGATTCA AAGCGTATTC AGCTAAGGTG TTTGGTGGTT TACCCCATCC 300 GGTACAGTGT AGGACCCCAC CACAATCACC AGTTTGGCAT GAACCTCTAC CAGCACCATT 41401 | || | | ||| |||| |||||||||| || ||||| ||||||||| ||||||||| TTTGCATTCC AAGACTCCAC CACAATCACC GGTCTGGCAC CAACCTCTAC CAGCACCATC 360 AAAATTGCAA TTAGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GCGCATTGAT 41461 |||||||||| |||||||||| |||| ||||| |||||| || |||||| | | || | AAAATTGCAA TTAGTACGAC CCCAAATACG TGCCATTTTG GTGCCCGGTG GAGCCCAAAA 420 GACCCATGTT TGGCCTCGAT CGAGACGTCG ACCACCGCCT ATCGGGGTCG ATGCTGCCCA 41521 ||| || || |||| | |||||||||| ||||| ||| | || |||| |||||||| CCACCAACTT TGACCTCTCT CGAGACGTCG GCCACCTCCT ACGGGAGTCG CCGCTGCCCA 480 AACGGTGTAG GGACAATTGT TGCGTACCTC -GAT--AGTG GCAGCATAAG TGTAAGTCAC 41578 |||||||| ||||| |||| | | ||||| || | | | |||||||| |||||||||| TACGGTGTAT GGACAGTTGT TATGGACCTC AAATACACCG GAAGCATAAG TGTAAGTCAC 540 TAAAGCAAGG AAGAAGAAAA TAAAAGAAGA TGTCAAGTAG CCCATGTTTG TGTA 41632 || |||||| | ||||| | ||| ||| |||||| | | ||| || | || AAAGGCAAGG AGAAAGAACA CTAAACAAGT TGTCAAATGA CTCATTTTAG AATA 594 hqPGS_C08HBa0235H18.1+_SGN-E207039- (41043 41632) ******************************************************************************** EST sequence 1017 -strand 595 n (File: SGN-E543853-) 1 TTGAAAAAAT CTTGACAAAT CGGTAGGACC ACATGACCCT TGAGTGCAAC AATATTGTTG 61 TCCTCCGAAT GTAGTACAAG GGTTGTTACA TCATCCGGGT ACCCTAAGTG AACCAGGGCA 121 TTCACCGTTT ATATTAGCAA CACATTGAAT TGGATGACAT TTTCCCGGCC CAGGGTTAGT 181 TGGGCCGAAA GACATAGGGA TGTTGAATCC ATCAATAACA GAAATGTCCC AGAAATCTAA 241 GTTGCTAAAT TGATTCAAAG CGTATTCAGC TAAGGTGTTT GGTGGTTTAC CCCATCCTTT 301 GCATTCCAAG ACTCCACCAC AATCACCGGT CTGGCACCAA CCTCTACCAG CACCATCAAA 361 ATTGCAATTA GTACGACCCC AAATACGTGC CATTTTGGTG CCCGGTGGAG CCCAAAACCA 421 CCAACTTTGA CCTCTCTCGA GACGTCGGCC ACCTCCTACG GGAGTCGCCG CTGCCCATAC 481 GGTGTATGGA CAGTTGTTAT GGACCTCAAA TACACCGGAA GCATAAGTGT AAGTCACAAA 541 GGCAAGGAGA AAGAACACTA AACAAGTTGT CAAATGACTC ATTTTAGAAT AAAAG Predicted gene structure (within gDNA segment 39778 to 44165): Exon 1 41045 41632 ( 588 n); cDNA 1 591 ( 591 n); score: 0.792 MATCH C08HBa0235H18.1+ SGN-E543853- 0.792 588 0.988 C PGS_C08HBa0235H18.1+_SGN-E543853- (41045 41632) Alignment (genomic DNA sequence = upper lines): TTTGAAAAAT CTCGAAAATT TTGTAGGACC ACATGGGCCT TGAGTACAAC AATATTGTTG 41104 || |||||| || || || | |||||||| ||||| ||| ||||| |||| |||||||||| TTGAAAAAAT CTTGACAAAT CGGTAGGACC ACATGACCCT TGAGTGCAAC AATATTGTTG 60 TCCTCCGAAC GTGGTACAAG GGTTGTTACA TCCTCCGGGT ACCCTAAGTG GACTAGGGCA 41164 ||||||||| || ||||||| |||||||||| || ||||||| |||||||||| || |||||| TCCTCCGAAT GTAGTACAAG GGTTGTTACA TCATCCGGGT ACCCTAAGTG AACCAGGGCA 120 TTCACCGTTT ATATTAGCCG TGCAATGAAT TGCATGGCAT TTTCCTCCAC TAGGATTGGT 41224 |||||||||| |||||||| || ||||| || ||| ||| ||||| | ||| || || TTCACCGTTT ATATTAGCAA CACATTGAAT TGGATGACAT TTTCCCGGCC CAGGGTTAGT 180 TGGGGCGAAA GTCATCGGTA TATTAAATCC GTCAACCAAA GAAATGTCCC AGAAATCTAG 41284 |||| ||||| | ||| || | | || ||||| |||| | | |||||||||| ||||||||| TGGGCCGAAA GACATAGGGA TGTTGAATCC ATCAATAACA GAAATGTCCC AGAAATCTAA 240 GTTGCTGAAT TGGTCCAAAG CATATTCAGC TAGGGTGTTT GGGGGTTTGC CCCACCCGGT 41344 |||||| ||| || | ||||| | |||||||| || ||||||| || ||||| | |||| || | GTTGCTAAAT TGATTCAAAG CGTATTCAGC TAAGGTGTTT GGTGGTTTAC CCCATCCTTT 300 ACAGTGTAGG ACCCCACCAC AATCACCAGT TTGGCATGAA CCTCTACCAG CACCATTAAA 41404 || | | | || ||||||| ||||||| || ||||| || |||||||||| |||||| ||| GCATTCCAAG ACTCCACCAC AATCACCGGT CTGGCACCAA CCTCTACCAG CACCATCAAA 360 ATTGCAATTA GTACGACCCC ATATACGTGC CATCTTAGTG CCCCTCGGCG CATTGATGAC 41464 |||||||||| |||||||||| | |||||||| ||| || ||| ||| || | | | ATTGCAATTA GTACGACCCC AAATACGTGC CATTTTGGTG CCCGGTGGAG CCCAAAACCA 420 CCATGTTTGG CCTCGATCGA GACGTCGACC ACCGCCTATC GGGGTCGATG CTGCCCAAAC 41524 ||| |||| |||| |||| ||||||| || ||| |||| || |||| | ||||||| || CCAACTTTGA CCTCTCTCGA GACGTCGGCC ACCTCCTACG GGAGTCGCCG CTGCCCATAC 480 GGTGTAGGGA CAATTGTTGC GTACCTC-GA T--AGTGGCA GCATAAGTGT AAGTCACTAA 41581 |||||| ||| || ||||| | ||||| | | | || | |||||||||| ||||||| || GGTGTATGGA CAGTTGTTAT GGACCTCAAA TACACCGGAA GCATAAGTGT AAGTCACAAA 540 AGCAAGGAAG AAGAAAATAA AAGAAGATGT CAAGTAGCCC ATGTTTGTGT A 41632 ||||||| ||||| | | || ||| ||| ||| | | | || || | | | GGCAAGGAGA AAGAACACTA AACAAGTTGT CAAATGACTC ATTTTAGAAT A 591 hqPGS_C08HBa0235H18.1+_SGN-E543853- (41045 41632) ******************************************************************************** EST sequence 864 -strand 584 n (File: SGN-E268610-) 1 GAAAAATCTT GACAAATCGG TAGGACCACA TGGACCTTGA GTGCAACAAT ATTGTTGTCC 61 TCCGAATGTA GTACAAGGGT TGTTACATCC TCCGGGTACC TTAAGTGAAC CAGGGCATTC 121 ACCGTTTATA TTAGCAACAC ATTGAATTGG ATGACATTTT CCCGGCCCAG GGTTAGTTGG 181 GCCGAAAGAC ATAGGGATGT TGAATCCATC AATAACAGAA ATGTCCCAGA AATCTAAGTT 241 GCTAAATTGA TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA 301 TTCCAAGACT CCACCACAAT CACCGGTCTG GCACCAACCT CTACCAGCAC CATCAAAATT 361 GCAATTAGTA CGACCCCAAA TACGTGCCAT TTTGGTGCCC GGTGGAGCCC AAAACCACCA 421 ACTTTGACCT CTCTCGAGAC GTCGGCCACC TCCTACGGGA GTCGCCGCTG CCCATACGGT 481 GTATGGACAG TTGTTATGGA CCTCAAATAC ACCGGAAGCA TAAGTGTAAG TCACAAAGCG 541 CAAGGAGAAA GAACACTAAA CAAGTTGTCA AATGACTCAT TTTA Predicted gene structure (within gDNA segment 39808 to 44085): Exon 1 41048 41623 ( 576 n); cDNA 1 580 ( 580 n); score: 0.795 MATCH C08HBa0235H18.1+ SGN-E268610- 0.795 576 0.986 C PGS_C08HBa0235H18.1+_SGN-E268610- (41048 41623) Alignment (genomic DNA sequence = upper lines): GAAAAATCTC GAAAATTTTG TAGGACCACA TGGGCCTTGA GTACAACAAT ATTGTTGTCC 41107 ||||||||| || || | | |||||||||| ||| |||||| || ||||||| |||||||||| GAAAAATCTT GACAAATCGG TAGGACCACA TGGACCTTGA GTGCAACAAT ATTGTTGTCC 60 TCCGAACGTG GTACAAGGGT TGTTACATCC TCCGGGTACC CTAAGTGGAC TAGGGCATTC 41167 |||||| || |||||||||| |||||||||| |||||||||| |||||| || ||||||||| TCCGAATGTA GTACAAGGGT TGTTACATCC TCCGGGTACC TTAAGTGAAC CAGGGCATTC 120 ACCGTTTATA TTAGCCGTGC AATGAATTGC ATGGCATTTT CCTCCACTAG GATTGGTTGG 41227 |||||||||| ||||| | | ||||||| ||| |||||| || | || | || ||||| ACCGTTTATA TTAGCAACAC ATTGAATTGG ATGACATTTT CCCGGCCCAG GGTTAGTTGG 180 GGCGAAAGTC ATCGGTATAT TAAATCCGTC AACCAAAGAA ATGTCCCAGA AATCTAGGTT 41287 | |||||| | || || || | | ||||| || || | |||| |||||||||| |||||| ||| GCCGAAAGAC ATAGGGATGT TGAATCCATC AATAACAGAA ATGTCCCAGA AATCTAAGTT 240 GCTGAATTGG TCCAAAGCAT ATTCAGCTAG GGTGTTTGGG GGTTTGCCCC ACCCGGTACA 41347 ||| ||||| | |||||| | ||||||||| ||||||||| ||||| |||| | || | || GCTAAATTGA TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA 300 GTGTAGGACC CCACCACAAT CACCAGTTTG GCATGAACCT CTACCAGCAC CATTAAAATT 41407 | | ||| |||||||||| |||| || || ||| ||||| |||||||||| ||| |||||| TTCCAAGACT CCACCACAAT CACCGGTCTG GCACCAACCT CTACCAGCAC CATCAAAATT 360 GCAATTAGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC CTCGGCGCAT TGATGACCCA 41467 |||||||||| |||||||| | |||||||||| || |||||| || || | ||| GCAATTAGTA CGACCCCAAA TACGTGCCAT TTTGGTGCCC GGTGGAGCCC AAAACCACCA 420 TGTTTGGCCT CGATCGAGAC GTCGACCACC GCCTATCGGG GTCGATGCTG CCCAAACGGT 41527 |||| ||| | ||||||| |||| ||||| |||| || |||| |||| |||| ||||| ACTTTGACCT CTCTCGAGAC GTCGGCCACC TCCTACGGGA GTCGCCGCTG CCCATACGGT 480 GTAGGGACAA TTGTTGCGTA CCTC-GAT-- AGTGGCAGCA TAAGTGTAAG TCACTAA-AG 41583 ||| ||||| ||||| | | |||| || | || |||| |||||||||| |||| || | GTATGGACAG TTGTTATGGA CCTCAAATAC ACCGGAAGCA TAAGTGTAAG TCACAAAGCG 540 CAAGGAAGAA GAAAATAAAA GAAGATGTCA AGTAGCCCAT 41623 |||||| || ||| | ||| ||| ||||| | | | ||| CAAGGAGAAA GAACACTAAA CAAGTTGTCA AATGACTCAT 580 hqPGS_C08HBa0235H18.1+_SGN-E268610- (41048 41623) ******************************************************************************** EST sequence 1110 -strand 561 n (File: SGN-E273742-) 1 GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 61 TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 121 CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 181 TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 241 TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA 301 TCACCAGTCT GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT 361 ATACGTGCCA TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA 421 CGTCGACCAC CGCCTATCGG AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT 481 ACCTCAATAG TGGCAGCATA AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA 541 GATGTCAAGT AGCCCATGTT T Predicted gene structure (within gDNA segment 40241 to 43316): Exon 1 41067 41627 ( 561 n); cDNA 1 561 ( 561 n); score: 0.893 MATCH C08HBa0235H18.1+ SGN-E273742- 0.893 561 1.000 C PGS_C08HBa0235H18.1+_SGN-E273742- (41067 41627) Alignment (genomic DNA sequence = upper lines): GTAGGACCAC ATGGGCCTTG AGTACAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGG 41126 ||||| |||| |||| ||||| || |||||| |||||||||| |||| ||||| |||||||||| GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 60 TTGTTACATC CTCCGGGTAC CCTAAGTGGA CTAGGGCATT CACCGTTTAT ATTAGCCGTG 41186 |||||||||| |||| ||||| | |||| | | ||| |||| |||| ||||| ||| |||||| TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 120 CAATGAATTG CATGGCATTT TCCTCCACTA GGATTGGTTG GGGCGAAAGT CATCGGTATA 41246 |||||||||| | || ||||| |||||||||| || || |||| |||| ||||| ||| || ||| CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 180 TTAAATCCGT CAACCAAAGA AATGTCCCAG AAATCTAGGT TGCTGAATTG GTCCAAAGCA 41306 |||||||| | | || ||||| ||||||||| ||||||| || |||| || || |||||| || TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 240 TATTCAGCTA GGGTGTTTGG GGGTTTGCCC CACCCGGTAC AGTGTAGGAC CCCACCACAA 41366 || || |||| |||||||||| |||||||||| || ||||||| | |||| ||| ||||||||| TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA 300 TCACCAGTTT GGCATGAACC TCTACCAGCA CCATTAAAAT TGCAATTAGT ACGACCCCAT 41426 |||||||| | | |||| ||| ||| || ||| ||||||| | ||||| ||| |||||||||| TCACCAGTCT GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT 360 ATACGTGCCA TCTTAGTGCC CCTCGGCGCA TTGATGACCC ATGTTTGGCC TCGATCGAGA 41486 |||||||||| ||||||| || |||||| ||| |||||||||| |||||||||| ||||| |||| ATACGTGCCA TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA 420 CGTCGACCAC CGCCTATCGG GGTCGATGCT GCCCAAACGG TGTAGGGACA ATTGTTGCGT 41546 |||||||||| |||||||||| |||||||| |||||||||| |||| ||||| ||||||||| CGTCGACCAC CGCCTATCGG AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT 480 ACCTCGATAG TGGCAGCATA AGTGTAAGTC ACTAAAGCAA GGAAGAAGAA AATAAAAGAA 41606 ||||| |||| |||||||||| ||| |||||| || || || ||||||||| || ||||||| ACCTCAATAG TGGCAGCATA AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA 540 GATGTCAAGT AGCCCATGTT T 41627 |||||||||| |||||||||| | GATGTCAAGT AGCCCATGTT T 561 hqPGS_C08HBa0235H18.1+_SGN-E273742- (41067 41627) ******************************************************************************** EST sequence 1063 -strand 551 n (File: SGN-E210488-) 1 ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 61 TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 121 TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 181 ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 241 TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 301 CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC 361 CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 421 ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT 481 AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATGTCAA 541 GTAGCCCATG T Predicted gene structure (within gDNA segment 40321 to 43296): Exon 1 41075 41625 ( 551 n); cDNA 1 551 ( 551 n); score: 0.893 MATCH C08HBa0235H18.1+ SGN-E210488- 0.893 551 1.000 C PGS_C08HBa0235H18.1+_SGN-E210488- (41075 41625) Alignment (genomic DNA sequence = upper lines): ACATGGGCCT TGAGTACAAC AATATTGTTG TCCTCCGAAC GTGGTACAAG GGTTGTTACA 41134 |||||| ||| || || |||| |||||||||| |||||| ||| |||||||||| |||||||||| ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 60 TCCTCCGGGT ACCCTAAGTG GACTAGGGCA TTCACCGTTT ATATTAGCCG TGCAATGAAT 41194 |||||| ||| ||| |||| | | ||| || |||||| ||| ||||| |||| |||||||||| TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 120 TGCATGGCAT TTTCCTCCAC TAGGATTGGT TGGGGCGAAA GTCATCGGTA TATTAAATCC 41254 ||| || ||| |||||||||| |||| || || |||||| ||| ||||| || | |||||||||| TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 180 GTCAACCAAA GAAATGTCCC AGAAATCTAG GTTGCTGAAT TGGTCCAAAG CATATTCAGC 41314 || || ||| |||||||||| | ||||||| |||||| || |||||||| | | || || || ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 240 TAGGGTGTTT GGGGGTTTGC CCCACCCGGT ACAGTGTAGG ACCCCACCAC AATCACCAGT 41374 |||||||||| |||||||||| |||| ||||| ||| |||| | || ||||||| |||||||||| TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 300 TTGGCATGAA CCTCTACCAG CACCATTAAA ATTGCAATTA GTACGACCCC ATATACGTGC 41434 || |||| | ||||| || | || ||||||| |||||| | |||||||||| |||||||||| CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC 360 CATCTTAGTG CCCCTCGGCG CATTGATGAC CCATGTTTGG CCTCGATCGA GACGTCGACC 41494 ||||||||| |||||||| | |||||||||| |||||||||| ||||||| || |||||||||| CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 420 ACCGCCTATC GGGGTCGATG CTGCCCAAAC GGTGTAGGGA CAATTGTTGC GTACCTCGAT 41554 |||||||||| || ||||||| | |||||||| |||||| ||| || ||||||| ||||||| || ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT 480 AGTGGCAGCA TAAGTGTAAG TCACTAAAGC AAGGAAGAAG AAAATAAAAG AAGATGTCAA 41614 |||||||||| ||||| |||| |||| || |||||||||| | || ||||| |||||||||| AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATGTCAA 540 GTAGCCCATG T 41625 |||||||||| | GTAGCCCATG T 551 hqPGS_C08HBa0235H18.1+_SGN-E210488- (41075 41625) ******************************************************************************** EST sequence 934 -strand 538 n (File: SGN-E206152-) 1 ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 61 TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 121 TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 181 ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 241 TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 301 CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC 361 CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 421 ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT 481 AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATGTC Predicted gene structure (within gDNA segment 40321 to 43166): Exon 1 41075 41612 ( 538 n); cDNA 1 538 ( 538 n); score: 0.890 MATCH C08HBa0235H18.1+ SGN-E206152- 0.890 538 1.000 C PGS_C08HBa0235H18.1+_SGN-E206152- (41075 41612) Alignment (genomic DNA sequence = upper lines): ACATGGGCCT TGAGTACAAC AATATTGTTG TCCTCCGAAC GTGGTACAAG GGTTGTTACA 41134 |||||| ||| || || |||| |||||||||| |||||| ||| |||||||||| |||||||||| ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 60 TCCTCCGGGT ACCCTAAGTG GACTAGGGCA TTCACCGTTT ATATTAGCCG TGCAATGAAT 41194 |||||| ||| ||| |||| | | ||| || |||||| ||| ||||| |||| |||||||||| TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 120 TGCATGGCAT TTTCCTCCAC TAGGATTGGT TGGGGCGAAA GTCATCGGTA TATTAAATCC 41254 ||| || ||| |||||||||| |||| || || |||||| ||| ||||| || | |||||||||| TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 180 GTCAACCAAA GAAATGTCCC AGAAATCTAG GTTGCTGAAT TGGTCCAAAG CATATTCAGC 41314 || || ||| |||||||||| | ||||||| |||||| || |||||||| | | || || || ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 240 TAGGGTGTTT GGGGGTTTGC CCCACCCGGT ACAGTGTAGG ACCCCACCAC AATCACCAGT 41374 |||||||||| |||||||||| |||| ||||| ||| |||| | || ||||||| |||||||||| TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 300 TTGGCATGAA CCTCTACCAG CACCATTAAA ATTGCAATTA GTACGACCCC ATATACGTGC 41434 || |||| | ||||| || | || ||||||| |||||| | |||||||||| |||||||||| CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC 360 CATCTTAGTG CCCCTCGGCG CATTGATGAC CCATGTTTGG CCTCGATCGA GACGTCGACC 41494 ||||||||| |||||||| | |||||||||| |||||||||| ||||||| || |||||||||| CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 420 ACCGCCTATC GGGGTCGATG CTGCCCAAAC GGTGTAGGGA CAATTGTTGC GTACCTCGAT 41554 |||||||||| || ||||||| | |||||||| |||||| ||| || ||||||| ||||||| || ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT 480 AGTGGCAGCA TAAGTGTAAG TCACTAAAGC AAGGAAGAAG AAAATAAAAG AAGATGTC 41612 |||||||||| ||||| |||| |||| || |||||||||| | || ||||| |||||||| AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATGTC 538 hqPGS_C08HBa0235H18.1+_SGN-E206152- (41075 41612) ******************************************************************************** EST sequence 1118 -strand 534 n (File: SGN-E288509-) 1 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 61 TACCTTAGGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 121 TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 181 AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 241 TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT 301 ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT 361 TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGACTG AGACGTCGAC CACCGCCTAT 421 CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGCAGC 481 ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA GAAGATGTCA AGTA Predicted gene structure (within gDNA segment 40411 to 43216): Exon 1 41084 41617 ( 534 n); cDNA 1 534 ( 534 n); score: 0.888 MATCH C08HBa0235H18.1+ SGN-E288509- 0.888 534 1.000 C PGS_C08HBa0235H18.1+_SGN-E288509- (41084 41617) Alignment (genomic DNA sequence = upper lines): TTGAGTACAA CAATATTGTT GTCCTCCGAA CGTGGTACAA GGGTTGTTAC ATCCTCCGGG 41143 ||| || ||| |||||||||| ||||||| || |||||||||| |||||||||| ||||||| || TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 60 TACCCTAAGT GGACTAGGGC ATTCACCGTT TATATTAGCC GTGCAATGAA TTGCATGGCA 41203 |||| || | | | ||| | ||||||| || |||||| ||| |||||||||| |||| || || TACCTTAGGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 120 TTTTCCTCCA CTAGGATTGG TTGGGGCGAA AGTCATCGGT ATATTAAATC CGTCAACCAA 41263 |||||||||| ||||| || | ||||||| || |||||| || |||||||||| | || || || TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 180 AGAAATGTCC CAGAAATCTA GGTTGCTGAA TTGGTCCAAA GCATATTCAG CTAGGGTGTT 41323 |||||||||| || ||||||| |||||| || |||||||| || || || | |||||||||| AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 240 TGGGGGTTTG CCCCACCCGG TACAGTGTAG GACCCCACCA CAATCACCAG TTTGGCATGA 41383 |||||||||| ||||| |||| |||| |||| ||| |||||| |||||||||| | || |||| TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT 300 ACCTCTACCA GCACCATTAA AATTGCAATT AGTACGACCC CATATACGTG CCATCTTAGT 41443 |||||| || ||| |||||| | |||||| |||||||||| |||||||||| |||||||||| ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT 360 GCCCCTCGGC GCATTGATGA CCCATGTTTG GCCTCGATCG AGACGTCGAC CACCGCCTAT 41503 |||||||| |||||||||| |||||||||| ||||||| | |||||||||| |||||||||| TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGACTG AGACGTCGAC CACCGCCTAT 420 CGGGGTCGAT GCTGCCCAAA CGGTGTAGGG ACAATTGTTG CGTACCTCGA TAGTGGCAGC 41563 ||| |||||| || ||||||| ||||||| || ||| |||||| |||||||| | |||||||||| CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGCAGC 480 ATAAGTGTAA GTCACTAAAG CAAGGAAGAA GAAAATAAAA GAAGATGTCA AGTA 41617 |||||| ||| ||||| || ||||||||| || || |||| |||||||||| |||| ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA GAAGATGTCA AGTA 534 hqPGS_C08HBa0235H18.1+_SGN-E288509- (41084 41617) ******************************************************************************** EST sequence 929 -strand 535 n (File: SGN-E275948-) 1 TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 61 ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 121 TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 181 GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 241 GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 301 CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 361 CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 421 GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT AGTGGCAGCA 481 TAAGTATAAG TCACTCAAAG AAGGAAGAAG AGAACAAAAG AAGATGTCAA GTAGC Predicted gene structure (within gDNA segment 40421 to 43236): Exon 1 41085 41619 ( 535 n); cDNA 1 535 ( 535 n); score: 0.893 MATCH C08HBa0235H18.1+ SGN-E275948- 0.893 535 1.000 C PGS_C08HBa0235H18.1+_SGN-E275948- (41085 41619) Alignment (genomic DNA sequence = upper lines): TGAGTACAAC AATATTGTTG TCCTCCGAAC GTGGTACAAG GGTTGTTACA TCCTCCGGGT 41144 || || |||| |||||||||| |||||| ||| |||||||||| |||||||||| |||||| ||| TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 60 ACCCTAAGTG GACTAGGGCA TTCACCGTTT ATATTAGCCG TGCAATGAAT TGCATGGCAT 41204 ||| |||| | | ||| || |||||| ||| ||||| |||| |||||||||| ||| || ||| ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 120 TTTCCTCCAC TAGGATTGGT TGGGGCGAAA GTCATCGGTA TATTAAATCC GTCAACCAAA 41264 |||||||||| |||| || || |||||| ||| ||||| || | |||||||||| || || ||| TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 180 GAAATGTCCC AGAAATCTAG GTTGCTGAAT TGGTCCAAAG CATATTCAGC TAGGGTGTTT 41324 |||||||||| | ||||||| |||||| || |||||||| | | || || || |||||||||| GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 240 GGGGGTTTGC CCCACCCGGT ACAGTGTAGG ACCCCACCAC AATCACCAGT TTGGCATGAA 41384 |||||||||| |||| ||||| ||| |||| | || ||||||| |||||||||| || |||| | GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 300 CCTCTACCAG CACCATTAAA ATTGCAATTA GTACGACCCC ATATACGTGC CATCTTAGTG 41444 ||||| || | || ||||||| |||||| | |||||||||| |||||||||| ||||||||| CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 360 CCCCTCGGCG CATTGATGAC CCATGTTTGG CCTCGATCGA GACGTCGACC ACCGCCTATC 41504 |||||||| | |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 420 GGGGTCGATG CTGCCCAAAC GGTGTAGGGA CAATTGTTGC GTACCTCGAT AGTGGCAGCA 41564 || ||||||| | |||||||| |||||| ||| || ||||||| ||||||| || |||||||||| GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT AGTGGCAGCA 480 TAAGTGTAAG TCACTAAAGC AAGGAAGAAG AAAATAAAAG AAGATGTCAA GTAGC 41619 ||||| |||| ||||| || |||||||||| | || ||||| |||||||||| ||||| TAAGTATAAG TCACTCAAAG AAGGAAGAAG AGAACAAAAG AAGATGTCAA GTAGC 535 hqPGS_C08HBa0235H18.1+_SGN-E275948- (41085 41619) ******************************************************************************** EST sequence 779 -strand 455 n (File: SGN-E253792-) 1 TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 61 ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 121 TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 181 GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 241 GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 301 CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 361 CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 421 GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTT Predicted gene structure (within gDNA segment 40421 to 42436): Exon 1 41085 41539 ( 455 n); cDNA 1 455 ( 455 n); score: 0.890 MATCH C08HBa0235H18.1+ SGN-E253792- 0.890 455 1.000 C PGS_C08HBa0235H18.1+_SGN-E253792- (41085 41539) Alignment (genomic DNA sequence = upper lines): TGAGTACAAC AATATTGTTG TCCTCCGAAC GTGGTACAAG GGTTGTTACA TCCTCCGGGT 41144 || || |||| |||||||||| |||||| ||| |||||||||| |||||||||| |||||| ||| TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 60 ACCCTAAGTG GACTAGGGCA TTCACCGTTT ATATTAGCCG TGCAATGAAT TGCATGGCAT 41204 ||| |||| | | ||| || |||||| ||| ||||| |||| |||||||||| ||| || ||| ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 120 TTTCCTCCAC TAGGATTGGT TGGGGCGAAA GTCATCGGTA TATTAAATCC GTCAACCAAA 41264 |||||||||| |||| || || |||||| ||| ||||| || | |||||||||| || || ||| TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 180 GAAATGTCCC AGAAATCTAG GTTGCTGAAT TGGTCCAAAG CATATTCAGC TAGGGTGTTT 41324 |||||||||| | ||||||| |||||| || |||||||| | | || || || |||||||||| GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 240 GGGGGTTTGC CCCACCCGGT ACAGTGTAGG ACCCCACCAC AATCACCAGT TTGGCATGAA 41384 |||||||||| |||| ||||| ||| |||| | || ||||||| |||||||||| || |||| | GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 300 CCTCTACCAG CACCATTAAA ATTGCAATTA GTACGACCCC ATATACGTGC CATCTTAGTG 41444 ||||| || | || ||||||| |||||| | |||||||||| |||||||||| ||||||||| CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 360 CCCCTCGGCG CATTGATGAC CCATGTTTGG CCTCGATCGA GACGTCGACC ACCGCCTATC 41504 |||||||| | |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 420 GGGGTCGATG CTGCCCAAAC GGTGTAGGGA CAATT 41539 || ||||||| | |||||||| |||||| ||| || || GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTT 455 hqPGS_C08HBa0235H18.1+_SGN-E253792- (41085 41539) ******************************************************************************** EST sequence 1079 -strand 441 n (File: SGN-E208167-) 1 GAGTGCAACA ATATTGTTGT CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA 61 CCCTAAGTGA ACCAGGGCAT TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT 121 TTCCCGGCCC AGGGTTAGTT GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG 181 AAATGTCCCA GAAATCTAAG TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG 241 GTGGTTTACC CCATCCTTTG CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC 301 CTCTACCAGC ACCATCAAAA TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC 361 CCGGTGGAGC CCAAAACCAC CAACTTTGAC CTCTCTCGAG ACGTCGGCCA CCTCCTACGG 421 GAGTCGCCGC TGCCCATACG G Predicted gene structure (within gDNA segment 40188 to 43035): Exon 1 41086 41526 ( 441 n); cDNA 1 441 ( 441 n); score: 0.821 MATCH C08HBa0235H18.1+ SGN-E208167- 0.821 441 1.000 C PGS_C08HBa0235H18.1+_SGN-E208167- (41086 41526) Alignment (genomic DNA sequence = upper lines): GAGTACAACA ATATTGTTGT CCTCCGAACG TGGTACAAGG GTTGTTACAT CCTCCGGGTA 41145 |||| ||||| |||||||||| |||||||| | | |||||||| |||||||||| |||||||||| GAGTGCAACA ATATTGTTGT CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA 60 CCCTAAGTGG ACTAGGGCAT TCACCGTTTA TATTAGCCGT GCAATGAATT GCATGGCATT 41205 ||||||||| || ||||||| |||||||||| ||||||| || |||||| | ||| |||| CCCTAAGTGA ACCAGGGCAT TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT 120 TTCCTCCACT AGGATTGGTT GGGGCGAAAG TCATCGGTAT ATTAAATCCG TCAACCAAAG 41265 |||| | ||| || ||| ||| |||||| ||| || || || ||||| |||| | || TTCCCGGCCC AGGGTTAGTT GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG 180 AAATGTCCCA GAAATCTAGG TTGCTGAATT GGTCCAAAGC ATATTCAGCT AGGGTGTTTG 41325 |||||||||| |||||||| | ||||| |||| | | |||||| ||||||||| | |||||||| AAATGTCCCA GAAATCTAAG TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG 240 GGGGTTTGCC CCACCCGGTA CAGTGTAGGA CCCCACCACA ATCACCAGTT TGGCATGAAC 41385 | ||||| || ||| || | || | | || | |||||||| |||||| || ||||| ||| GTGGTTTACC CCATCCTTTG CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC 300 CTCTACCAGC ACCATTAAAA TTGCAATTAG TACGACCCCA TATACGTGCC ATCTTAGTGC 41445 |||||||||| ||||| |||| |||||||||| |||||||||| ||||||||| || || |||| CTCTACCAGC ACCATCAAAA TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC 360 CCCTCGGCGC ATTGATGACC CATGTTTGGC CTCGATCGAG ACGTCGACCA CCGCCTATCG 41505 || || || | | || |||| | ||| ||||| |||||| ||| || |||| | CCGGTGGAGC CCAAAACCAC CAACTTTGAC CTCTCTCGAG ACGTCGGCCA CCTCCTACGG 420 GGGTCGATGC TGCCCAAACG G 41526 | |||| || |||||| ||| | GAGTCGCCGC TGCCCATACG G 441 hqPGS_C08HBa0235H18.1+_SGN-E208167- (41086 41526) ******************************************************************************** EST sequence 770 -strand 542 n (File: SGN-E215146-) 1 GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 61 CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 121 TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 181 AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 241 GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 301 TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 361 CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG 421 AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA 481 AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT AGCCCATGTT 541 TG Predicted gene structure (within gDNA segment 40441 to 43326): Exon 1 41088 41628 ( 541 n); cDNA 2 542 ( 541 n); score: 0.895 MATCH C08HBa0235H18.1+ SGN-E215146- 0.895 541 0.998 C PGS_C08HBa0235H18.1+_SGN-E215146- (41088 41628) Alignment (genomic DNA sequence = upper lines): GTACAACAAT ATTGTTGTCC TCCGAACGTG GTACAAGGGT TGTTACATCC TCCGGGTACC 41147 || ||||||| |||||||||| ||| |||||| |||||||||| |||||||||| ||| |||||| GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC 61 CTAAGTGGAC TAGGGCATTC ACCGTTTATA TTAGCCGTGC AATGAATTGC ATGGCATTTT 41207 |||| | | ||| ||||| ||| |||||| || ||||||| |||||||||| || |||||| TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT 121 CCTCCACTAG GATTGGTTGG GGCGAAAGTC ATCGGTATAT TAAATCCGTC AACCAAAGAA 41267 |||||||||| | || ||||| ||| |||||| || || |||| ||||||| || || |||||| CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 181 ATGTCCCAGA AATCTAGGTT GCTGAATTGG TCCAAAGCAT ATTCAGCTAG GGTGTTTGGG 41327 |||||||| | |||||| ||| ||| || ||| ||||| || | | || ||||| |||||||||| ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG 241 GGTTTGCCCC ACCCGGTACA GTGTAGGACC CCACCACAAT CACCAGTTTG GCATGAACCT 41387 |||||||||| | |||||||| |||| ||| |||||||||| ||||||| || |||| |||| GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT 301 CTACCAGCAC CATTAAAATT GCAATTAGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC 41447 || || ||| ||||||| || |||| |||| |||||||||| |||||||||| |||||| ||| CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC 361 CTCGGCGCAT TGATGACCCA TGTTTGGCCT CGATCGAGAC GTCGACCACC GCCTATCGGG 41507 ||||| |||| |||||||||| |||||||||| |||| ||||| |||||||||| ||||||||| CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC GCCTATCGGA 421 GTCGATGCTG CCCAAACGGT GTAGGGACAA TTGTTGCGTA CCTCGATAGT GGCAGCATAA 41567 |||||||| | |||||||||| ||| ||||| |||||||||| |||| ||||| |||||||||| GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT GGCAGCATAA 481 GTGTAAGTCA CTAAAGCAAG GAAGAAGAAA ATAAAAGAAG ATGTCAAGTA GCCCATGTTT 41627 || ||||||| | || ||| |||||||| | | |||||||| |||||||||| |||||||||| GTATAAGTCA CACAAAGAAG GAAGAAGAGA ACAAAAGAAG ATGTCAAGTA GCCCATGTTT 541 G 41628 | G 542 hqPGS_C08HBa0235H18.1+_SGN-E215146- (41088 41628) ******************************************************************************** EST sequence 1005 -strand 531 n (File: SGN-E206874-) 1 GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 61 CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 121 TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 181 AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 241 GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 301 TCTGCCTGCA GCATTATAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 361 CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG 421 AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA 481 AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT A Predicted gene structure (within gDNA segment 40441 to 43216): Exon 1 41088 41617 ( 530 n); cDNA 2 531 ( 530 n); score: 0.891 MATCH C08HBa0235H18.1+ SGN-E206874- 0.891 530 0.998 C PGS_C08HBa0235H18.1+_SGN-E206874- (41088 41617) Alignment (genomic DNA sequence = upper lines): GTACAACAAT ATTGTTGTCC TCCGAACGTG GTACAAGGGT TGTTACATCC TCCGGGTACC 41147 || ||||||| |||||||||| ||| |||||| |||||||||| |||||||||| ||| |||||| GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC 61 CTAAGTGGAC TAGGGCATTC ACCGTTTATA TTAGCCGTGC AATGAATTGC ATGGCATTTT 41207 |||| | | ||| ||||| ||| |||||| || ||||||| |||||||||| || |||||| TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT 121 CCTCCACTAG GATTGGTTGG GGCGAAAGTC ATCGGTATAT TAAATCCGTC AACCAAAGAA 41267 |||||||||| | || ||||| ||| |||||| || || |||| ||||||| || || |||||| CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 181 ATGTCCCAGA AATCTAGGTT GCTGAATTGG TCCAAAGCAT ATTCAGCTAG GGTGTTTGGG 41327 |||||||| | |||||| ||| ||| || ||| ||||| || | | || ||||| |||||||||| ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG 241 GGTTTGCCCC ACCCGGTACA GTGTAGGACC CCACCACAAT CACCAGTTTG GCATGAACCT 41387 |||||||||| | |||||||| |||| ||| |||||||||| ||||||| || |||| |||| GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT 301 CTACCAGCAC CATTAAAATT GCAATTAGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC 41447 || || ||| ||||| | || |||| |||| |||||||||| |||||||||| |||||| ||| CTGCCTGCAG CATTATAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC 361 CTCGGCGCAT TGATGACCCA TGTTTGGCCT CGATCGAGAC GTCGACCACC GCCTATCGGG 41507 ||||| |||| |||||||||| |||||||||| |||| ||||| |||||||||| ||||||||| CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC GCCTATCGGA 421 GTCGATGCTG CCCAAACGGT GTAGGGACAA TTGTTGCGTA CCTCGATAGT GGCAGCATAA 41567 |||||||| | |||||||||| ||| ||||| |||||||||| |||| ||||| |||||||||| GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT GGCAGCATAA 481 GTGTAAGTCA CTAAAGCAAG GAAGAAGAAA ATAAAAGAAG ATGTCAAGTA 41617 || ||||||| | || ||| |||||||| | | |||||||| |||||||||| GTATAAGTCA CACAAAGAAG GAAGAAGAGA ACAAAAGAAG ATGTCAAGTA 531 hqPGS_C08HBa0235H18.1+_SGN-E206874- (41088 41617) ******************************************************************************** EST sequence 1172 -strand 525 n (File: SGN-E208900-) 1 GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 61 CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 121 TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 181 AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 241 GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 301 CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 361 CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 421 GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT 481 AAGTATAAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA AGATG Predicted gene structure (within gDNA segment 40431 to 43146): Exon 1 41088 41610 ( 523 n); cDNA 3 525 ( 523 n); score: 0.891 MATCH C08HBa0235H18.1+ SGN-E208900- 0.891 523 0.996 C PGS_C08HBa0235H18.1+_SGN-E208900- (41088 41610) Alignment (genomic DNA sequence = upper lines): GTACAACAAT ATTGTTGTCC TCCGAACGTG GTACAAGGGT TGTTACATCC TCCGGGTACC 41147 || ||||||| |||||||||| ||| |||||| |||||||||| |||||||||| ||| |||||| GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC 62 CTAAGTGGAC TAGGGCATTC ACCGTTTATA TTAGCCGTGC AATGAATTGC ATGGCATTTT 41207 |||| | | ||| ||||| ||| |||||| || ||||||| |||||||||| || |||||| TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT 122 CCTCCACTAG GATTGGTTGG GGCGAAAGTC ATCGGTATAT TAAATCCGTC AACCAAAGAA 41267 |||||||||| | || ||||| ||| |||||| || || |||| ||||||| || || |||||| CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 182 ATGTCCCAGA AATCTAGGTT GCTGAATTGG TCCAAAGCAT ATTCAGCTAG GGTGTTTGGG 41327 |||||||| | |||||| ||| ||| || ||| ||||| || | | || ||||| |||||||||| ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG 242 GGTTTGCCCC ACCCGGTACA GTGTAGGACC CCACCACAAT CACCAGTTTG GCATGAACCT 41387 |||||||||| | |||||||| |||| ||| |||||||||| ||||||| || |||| |||| GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT 302 CTACCAGCAC CATTAAAATT GCAATTAGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC 41447 || || ||| ||||||| || |||| |||| |||||||||| |||||||||| |||||| ||| CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC 362 CTCGGCGCAT TGATGACCCA TGTTTGGCCT CGATCGAGAC GTCGACCACC GCCTATCGGG 41507 ||||| |||| |||||||||| |||||||||| |||| ||||| |||||||||| ||||||||| CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC GCCTATCGGA 422 GTCGATGCTG CCCAAACGGT GTAGGGACAA TTGTTGCGTA CCTCGATAGT GGCAGCATAA 41567 |||||||| | |||||||||| ||| ||||| |||||||||| |||| ||||| |||||||||| GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT GGCAGCATAA 482 GTGTAAGTCA CTAAAGCAAG GAAGAAGAAA ATAAAAGAAG ATG 41610 || ||||||| | || ||| |||||||| | | |||||||| ||| GTATAAGTCA CACAAAGAAG GAAGAAGAGA ACAAAAGAAG ATG 525 hqPGS_C08HBa0235H18.1+_SGN-E208900- (41088 41610) ******************************************************************************** EST sequence 898 -strand 499 n (File: SGN-E335641-) 1 GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC 61 TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT 121 CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 181 ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG 241 GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT 301 CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC 361 CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC GCCTATCGGA 421 GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT GGCAGCATAA 481 GTATAAGTCA CACAAAGAA Predicted gene structure (within gDNA segment 40451 to 42906): Exon 1 41088 41586 ( 499 n); cDNA 1 499 ( 499 n); score: 0.890 MATCH C08HBa0235H18.1+ SGN-E335641- 0.890 499 1.000 C PGS_C08HBa0235H18.1+_SGN-E335641- (41088 41586) Alignment (genomic DNA sequence = upper lines): GTACAACAAT ATTGTTGTCC TCCGAACGTG GTACAAGGGT TGTTACATCC TCCGGGTACC 41147 || ||||||| |||||||||| ||| |||||| |||||||||| |||||||||| ||| |||||| GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC 60 CTAAGTGGAC TAGGGCATTC ACCGTTTATA TTAGCCGTGC AATGAATTGC ATGGCATTTT 41207 |||| | | ||| ||||| ||| |||||| || ||||||| |||||||||| || |||||| TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT 120 CCTCCACTAG GATTGGTTGG GGCGAAAGTC ATCGGTATAT TAAATCCGTC AACCAAAGAA 41267 |||||||||| | || ||||| ||| |||||| || || |||| ||||||| || || |||||| CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 180 ATGTCCCAGA AATCTAGGTT GCTGAATTGG TCCAAAGCAT ATTCAGCTAG GGTGTTTGGG 41327 |||||||| | |||||| ||| ||| || ||| ||||| || | | || ||||| |||||||||| ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG 240 GGTTTGCCCC ACCCGGTACA GTGTAGGACC CCACCACAAT CACCAGTTTG GCATGAACCT 41387 |||||||||| | |||||||| |||| ||| |||||||||| ||||||| || |||| |||| GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT 300 CTACCAGCAC CATTAAAATT GCAATTAGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC 41447 || || ||| ||||||| || |||| |||| |||||||||| |||||||||| |||||| ||| CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC 360 CTCGGCGCAT TGATGACCCA TGTTTGGCCT CGATCGAGAC GTCGACCACC GCCTATCGGG 41507 ||||| |||| |||||||||| |||||||||| |||| ||||| |||||||||| ||||||||| CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC GCCTATCGGA 420 GTCGATGCTG CCCAAACGGT GTAGGGACAA TTGTTGCGTA CCTCGATAGT GGCAGCATAA 41567 |||||||| | |||||||||| ||| ||||| |||||||||| |||| ||||| |||||||||| GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT GGCAGCATAA 480 GTGTAAGTCA CTAAAGCAA 41586 || ||||||| | || || GTATAAGTCA CACAAAGAA 499 hqPGS_C08HBa0235H18.1+_SGN-E335641- (41088 41586) ******************************************************************************** EST sequence 1201 -strand 492 n (File: SGN-E209439-) 1 GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 61 CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 121 TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 181 AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 241 GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 301 TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 361 CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG 421 AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA 481 AGTATAAGTC AC Predicted gene structure (within gDNA segment 40441 to 42826): Exon 1 41088 41578 ( 491 n); cDNA 2 492 ( 491 n); score: 0.896 MATCH C08HBa0235H18.1+ SGN-E209439- 0.896 491 0.998 C PGS_C08HBa0235H18.1+_SGN-E209439- (41088 41578) Alignment (genomic DNA sequence = upper lines): GTACAACAAT ATTGTTGTCC TCCGAACGTG GTACAAGGGT TGTTACATCC TCCGGGTACC 41147 || ||||||| |||||||||| ||| |||||| |||||||||| |||||||||| ||| |||||| GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC 61 CTAAGTGGAC TAGGGCATTC ACCGTTTATA TTAGCCGTGC AATGAATTGC ATGGCATTTT 41207 |||| | | ||| ||||| ||| |||||| || ||||||| |||||||||| || |||||| TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT 121 CCTCCACTAG GATTGGTTGG GGCGAAAGTC ATCGGTATAT TAAATCCGTC AACCAAAGAA 41267 |||||||||| | || ||||| ||| |||||| || || |||| ||||||| || || |||||| CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 181 ATGTCCCAGA AATCTAGGTT GCTGAATTGG TCCAAAGCAT ATTCAGCTAG GGTGTTTGGG 41327 |||||||| | |||||| ||| ||| || ||| ||||| || | | || ||||| |||||||||| ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG 241 GGTTTGCCCC ACCCGGTACA GTGTAGGACC CCACCACAAT CACCAGTTTG GCATGAACCT 41387 |||||||||| | |||||||| |||| ||| |||||||||| ||||||| || |||| |||| GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT 301 CTACCAGCAC CATTAAAATT GCAATTAGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC 41447 || || ||| ||||||| || |||| |||| |||||||||| |||||||||| |||||| ||| CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC 361 CTCGGCGCAT TGATGACCCA TGTTTGGCCT CGATCGAGAC GTCGACCACC GCCTATCGGG 41507 ||||| |||| |||||||||| |||||||||| |||| ||||| |||||||||| ||||||||| CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC GCCTATCGGA 421 GTCGATGCTG CCCAAACGGT GTAGGGACAA TTGTTGCGTA CCTCGATAGT GGCAGCATAA 41567 |||||||| | |||||||||| ||| ||||| |||||||||| |||| ||||| |||||||||| GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT GGCAGCATAA 481 GTGTAAGTCA C 41578 || ||||||| | GTATAAGTCA C 492 hqPGS_C08HBa0235H18.1+_SGN-E209439- (41088 41578) ******************************************************************************** EST sequence 1158 -strand 481 n (File: SGN-E311822-) 1 GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 61 CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 121 TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 181 AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 241 GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 301 TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 361 CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG 421 AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA 481 A Predicted gene structure (within gDNA segment 40441 to 42716): Exon 1 41088 41567 ( 480 n); cDNA 2 481 ( 480 n); score: 0.896 MATCH C08HBa0235H18.1+ SGN-E311822- 0.896 480 0.998 C PGS_C08HBa0235H18.1+_SGN-E311822- (41088 41567) Alignment (genomic DNA sequence = upper lines): GTACAACAAT ATTGTTGTCC TCCGAACGTG GTACAAGGGT TGTTACATCC TCCGGGTACC 41147 || ||||||| |||||||||| ||| |||||| |||||||||| |||||||||| ||| |||||| GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC 61 CTAAGTGGAC TAGGGCATTC ACCGTTTATA TTAGCCGTGC AATGAATTGC ATGGCATTTT 41207 |||| | | ||| ||||| ||| |||||| || ||||||| |||||||||| || |||||| TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT 121 CCTCCACTAG GATTGGTTGG GGCGAAAGTC ATCGGTATAT TAAATCCGTC AACCAAAGAA 41267 |||||||||| | || ||||| ||| |||||| || || |||| ||||||| || || |||||| CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 181 ATGTCCCAGA AATCTAGGTT GCTGAATTGG TCCAAAGCAT ATTCAGCTAG GGTGTTTGGG 41327 |||||||| | |||||| ||| ||| || ||| ||||| || | | || ||||| |||||||||| ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG 241 GGTTTGCCCC ACCCGGTACA GTGTAGGACC CCACCACAAT CACCAGTTTG GCATGAACCT 41387 |||||||||| | |||||||| |||| ||| |||||||||| ||||||| || |||| |||| GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT 301 CTACCAGCAC CATTAAAATT GCAATTAGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC 41447 || || ||| ||||||| || |||| |||| |||||||||| |||||||||| |||||| ||| CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC 361 CTCGGCGCAT TGATGACCCA TGTTTGGCCT CGATCGAGAC GTCGACCACC GCCTATCGGG 41507 ||||| |||| |||||||||| |||||||||| |||| ||||| |||||||||| ||||||||| CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC GCCTATCGGA 421 GTCGATGCTG CCCAAACGGT GTAGGGACAA TTGTTGCGTA CCTCGATAGT GGCAGCATAA 41567 |||||||| | |||||||||| ||| ||||| |||||||||| |||| ||||| |||||||||| GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT GGCAGCATAA 481 hqPGS_C08HBa0235H18.1+_SGN-E311822- (41088 41567) ******************************************************************************** EST sequence 762 -strand 473 n (File: SGN-E334899-) 1 TGTGCAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGA TTGTTACATC CTCCGGGCAC 61 CCTAAGTGAA CCAGGACATT CACCATTTAT ATTAGCCGTA CAATGAATTG CATGGCATTT 121 CCCTCCACTA GGATTGGTCG GGGCGAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 181 AATGTCCCAG AAATCTAGGT TGCTAAACTG GTCCAAGGCG TACTCGGCCA GGGTGTTTGG 241 TGGTTTGCCC CACCCGGTAC ATTGCAAGAC CCCACCACAA TCACCAGTCT GACATGAACC 301 TCTACCAGCA CCATCAAAGT TGCAATTCGT ACGACCCCAT ATACGTGCCA TCTTAGTGCC 361 CCTCGGTGCA TTGATGACCC ATGTTTGGCC TCGATCAAGA CGTCGACCAC CGCCTATTGG 421 GGTCGACGCC GCCCAGACGG TGTATGGACA GTTGTTGCGT ACCTCGAAAG TGG Predicted gene structure (within gDNA segment 40441 to 42663): Exon 1 41088 41559 ( 472 n); cDNA 2 473 ( 472 n); score: 0.915 MATCH C08HBa0235H18.1+ SGN-E334899- 0.915 472 0.998 C PGS_C08HBa0235H18.1+_SGN-E334899- (41088 41559) Alignment (genomic DNA sequence = upper lines): GTACAACAAT ATTGTTGTCC TCCGAACGTG GTACAAGGGT TGTTACATCC TCCGGGTACC 41147 || ||||||| |||||||||| |||||||||| |||||||| | |||||||||| |||||| ||| GTGCAACAAT ATTGTTGTCC TCCGAACGTG GTACAAGGAT TGTTACATCC TCCGGGCACC 61 CTAAGTGGAC TAGGGCATTC ACCGTTTATA TTAGCCGTGC AATGAATTGC ATGGCATTTT 41207 ||||||| || ||| ||||| ||| |||||| |||||||| | |||||||||| ||||||||| CTAAGTGAAC CAGGACATTC ACCATTTATA TTAGCCGTAC AATGAATTGC ATGGCATTTC 121 CCTCCACTAG GATTGGTTGG GGCGAAAGTC ATCGGTATAT TAAATCCGTC AACCAAAGAA 41267 |||||||||| ||||||| || |||||||||| || || |||| ||||||| || || |||||| CCTCCACTAG GATTGGTCGG GGCGAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 181 ATGTCCCAGA AATCTAGGTT GCTGAATTGG TCCAAAGCAT ATTCAGCTAG GGTGTTTGGG 41327 |||||||||| |||||||||| ||| || ||| ||||| || | | || || || ||||||||| ATGTCCCAGA AATCTAGGTT GCTAAACTGG TCCAAGGCGT ACTCGGCCAG GGTGTTTGGT 241 GGTTTGCCCC ACCCGGTACA GTGTAGGACC CCACCACAAT CACCAGTTTG GCATGAACCT 41387 |||||||||| |||||||||| || | |||| |||||||||| ||||||| || ||||||||| GGTTTGCCCC ACCCGGTACA TTGCAAGACC CCACCACAAT CACCAGTCTG ACATGAACCT 301 CTACCAGCAC CATTAAAATT GCAATTAGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC 41447 |||||||||| ||| ||| || |||||| ||| |||||||||| |||||||||| |||||||||| CTACCAGCAC CATCAAAGTT GCAATTCGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC 361 CTCGGCGCAT TGATGACCCA TGTTTGGCCT CGATCGAGAC GTCGACCACC GCCTATCGGG 41507 ||||| |||| |||||||||| |||||||||| ||||| |||| |||||||||| |||||| ||| CTCGGTGCAT TGATGACCCA TGTTTGGCCT CGATCAAGAC GTCGACCACC GCCTATTGGG 421 GTCGATGCTG CCCAAACGGT GTAGGGACAA TTGTTGCGTA CCTCGATAGT GG 41559 ||||| || | |||| ||||| ||| ||||| |||||||||| |||||| ||| || GTCGACGCCG CCCAGACGGT GTATGGACAG TTGTTGCGTA CCTCGAAAGT GG 473 hqPGS_C08HBa0235H18.1+_SGN-E334899- (41088 41559) ******************************************************************************** EST sequence 1103 -strand 411 n (File: SGN-E273584-) 1 GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 61 CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 121 TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 181 AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 241 GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 301 TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 361 CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC C Predicted gene structure (within gDNA segment 40441 to 42241): Exon 1 41088 41497 ( 410 n); cDNA 2 411 ( 410 n); score: 0.890 MATCH C08HBa0235H18.1+ SGN-E273584- 0.890 410 0.998 C PGS_C08HBa0235H18.1+_SGN-E273584- (41088 41497) Alignment (genomic DNA sequence = upper lines): GTACAACAAT ATTGTTGTCC TCCGAACGTG GTACAAGGGT TGTTACATCC TCCGGGTACC 41147 || ||||||| |||||||||| ||| |||||| |||||||||| |||||||||| ||| |||||| GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC 61 CTAAGTGGAC TAGGGCATTC ACCGTTTATA TTAGCCGTGC AATGAATTGC ATGGCATTTT 41207 |||| | | ||| ||||| ||| |||||| || ||||||| |||||||||| || |||||| TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT 121 CCTCCACTAG GATTGGTTGG GGCGAAAGTC ATCGGTATAT TAAATCCGTC AACCAAAGAA 41267 |||||||||| | || ||||| ||| |||||| || || |||| ||||||| || || |||||| CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 181 ATGTCCCAGA AATCTAGGTT GCTGAATTGG TCCAAAGCAT ATTCAGCTAG GGTGTTTGGG 41327 |||||||| | |||||| ||| ||| || ||| ||||| || | | || ||||| |||||||||| ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG 241 GGTTTGCCCC ACCCGGTACA GTGTAGGACC CCACCACAAT CACCAGTTTG GCATGAACCT 41387 |||||||||| | |||||||| |||| ||| |||||||||| ||||||| || |||| |||| GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT 301 CTACCAGCAC CATTAAAATT GCAATTAGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC 41447 || || ||| ||||||| || |||| |||| |||||||||| |||||||||| |||||| ||| CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC 361 CTCGGCGCAT TGATGACCCA TGTTTGGCCT CGATCGAGAC GTCGACCACC 41497 ||||| |||| |||||||||| |||||||||| |||| ||||| |||||||||| CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC 411 hqPGS_C08HBa0235H18.1+_SGN-E273584- (41088 41497) ******************************************************************************** EST sequence 692 -strand 534 n (File: SGN-E250262-) 1 CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG 61 GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA 121 CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC 181 CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG 241 CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT 301 GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA 361 GCATTGATGA CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT CGGAGTCGAT 421 GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGCAGC ATAAGTATAA 481 GTCACACAAA GAAGGAAGAA GAGAACAAAA GAAGATGTCA AGTAGCCCAT GTTT Predicted gene structure (within gDNA segment 40484 to 43316): Exon 1 41094 41627 ( 534 n); cDNA 1 534 ( 534 n); score: 0.895 MATCH C08HBa0235H18.1+ SGN-E250262- 0.895 534 1.000 C PGS_C08HBa0235H18.1+_SGN-E250262- (41094 41627) Alignment (genomic DNA sequence = upper lines): CAATATTGTT GTCCTCCGAA CGTGGTACAA GGGTTGTTAC ATCCTCCGGG TACCCTAAGT 41153 |||||||||| ||||||| || |||||||||| |||||||||| ||||||| || |||| |||| CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG 60 GGACTAGGGC ATTCACCGTT TATATTAGCC GTGCAATGAA TTGCATGGCA TTTTCCTCCA 41213 | | ||| | ||||||| || |||||| ||| |||||||||| |||| || || |||||||||| GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA 120 CTAGGATTGG TTGGGGCGAA AGTCATCGGT ATATTAAATC CGTCAACCAA AGAAATGTCC 41273 ||||| || | ||||||| || |||||| || |||||||||| | || || || |||||||||| CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC 180 CAGAAATCTA GGTTGCTGAA TTGGTCCAAA GCATATTCAG CTAGGGTGTT TGGGGGTTTG 41333 || ||||||| |||||| || |||||||| || || || | |||||||||| |||||||||| CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG 240 CCCCACCCGG TACAGTGTAG GACCCCACCA CAATCACCAG TTTGGCATGA ACCTCTACCA 41393 ||||| |||| |||| |||| ||| |||||| |||||||||| | || |||| |||||| || CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT 300 GCACCATTAA AATTGCAATT AGTACGACCC CATATACGTG CCATCTTAGT GCCCCTCGGC 41453 ||| |||||| | |||||| |||||||||| |||||||||| |||||||||| |||||||| GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA 360 GCATTGATGA CCCATGTTTG GCCTCGATCG AGACGTCGAC CACCGCCTAT CGGGGTCGAT 41513 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| ||| |||||| GCATTGATGA CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT CGGAGTCGAT 420 GCTGCCCAAA CGGTGTAGGG ACAATTGTTG CGTACCTCGA TAGTGGCAGC ATAAGTGTAA 41573 || ||||||| ||||||| || ||| |||||| |||||||| | |||||||||| |||||| ||| GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGCAGC ATAAGTATAA 480 GTCACTAAAG CAAGGAAGAA GAAAATAAAA GAAGATGTCA AGTAGCCCAT GTTT 41627 ||||| || ||||||||| || || |||| |||||||||| |||||||||| |||| GTCACACAAA GAAGGAAGAA GAGAACAAAA GAAGATGTCA AGTAGCCCAT GTTT 534 hqPGS_C08HBa0235H18.1+_SGN-E250262- (41094 41627) ******************************************************************************** EST sequence 994 -strand 516 n (File: SGN-E274937-) 1 AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACCTTAAGGG 61 CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC 121 TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC 181 AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC 241 CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG 301 CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG 361 CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC GGAGTCGATG 421 CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT AGTGGCAGCA TAAGTATAAG 481 TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATG Predicted gene structure (within gDNA segment 40485 to 43146): Exon 1 41095 41610 ( 516 n); cDNA 1 516 ( 516 n); score: 0.891 MATCH C08HBa0235H18.1+ SGN-E274937- 0.891 516 1.000 C PGS_C08HBa0235H18.1+_SGN-E274937- (41095 41610) Alignment (genomic DNA sequence = upper lines): AATATTGTTG TCCTCCGAAC GTGGTACAAG GGTTGTTACA TCCTCCGGGT ACCCTAAGTG 41154 |||||||||| |||||| ||| |||||||||| |||||||||| |||||| ||| ||| |||| | AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACCTTAAGGG 60 GACTAGGGCA TTCACCGTTT ATATTAGCCG TGCAATGAAT TGCATGGCAT TTTCCTCCAC 41214 | ||| || |||||| ||| ||||| |||| |||||||||| ||| || ||| |||||||||| CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC 120 TAGGATTGGT TGGGGCGAAA GTCATCGGTA TATTAAATCC GTCAACCAAA GAAATGTCCC 41274 |||| || || |||||| ||| ||||| || | |||||||||| || || ||| |||||||||| TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC 180 AGAAATCTAG GTTGCTGAAT TGGTCCAAAG CATATTCAGC TAGGGTGTTT GGGGGTTTGC 41334 | ||||||| |||||| || |||||||| | | || || || |||||||||| |||||||||| AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC 240 CCCACCCGGT ACAGTGTAGG ACCCCACCAC AATCACCAGT TTGGCATGAA CCTCTACCAG 41394 |||| ||||| ||| |||| | || ||||||| |||||||||| || |||| | ||||| || | CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG 300 CACCATTAAA ATTGCAATTA GTACGACCCC ATATACGTGC CATCTTAGTG CCCCTCGGCG 41454 || ||||||| |||||| | |||||||||| |||||||||| ||||||||| |||||||| | CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG 360 CATTGATGAC CCATGTTTGG CCTCGATCGA GACGTCGACC ACCGCCTATC GGGGTCGATG 41514 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| || ||||||| CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC GGAGTCGATG 420 CTGCCCAAAC GGTGTAGGGA CAATTGTTGC GTACCTCGAT AGTGGCAGCA TAAGTGTAAG 41574 | |||||||| |||||| ||| || ||||||| ||||||| || |||||||||| ||||| |||| CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT AGTGGCAGCA TAAGTATAAG 480 TCACTAAAGC AAGGAAGAAG AAAATAAAAG AAGATG 41610 |||| || |||||||||| | || ||||| |||||| TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATG 516 hqPGS_C08HBa0235H18.1+_SGN-E274937- (41095 41610) ******************************************************************************** EST sequence 731 -strand 390 n (File: SGN-E205109-) 1 AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACATTAAGGG 61 CGCGAGTACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC 121 TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC 181 AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC 241 CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG 301 CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG 361 CATTGATGAC CCATGATTGG CCTTTATTGA Predicted gene structure (within gDNA segment 40485 to 42219): Exon 1 41095 41484 ( 390 n); cDNA 1 390 ( 390 n); score: 0.874 MATCH C08HBa0235H18.1+ SGN-E205109- 0.874 390 1.000 C PGS_C08HBa0235H18.1+_SGN-E205109- (41095 41484) Alignment (genomic DNA sequence = upper lines): AATATTGTTG TCCTCCGAAC GTGGTACAAG GGTTGTTACA TCCTCCGGGT ACCCTAAGTG 41154 |||||||||| |||||| ||| |||||||||| |||||||||| |||||| ||| || |||| | AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACATTAAGGG 60 GACTAGGGCA TTCACCGTTT ATATTAGCCG TGCAATGAAT TGCATGGCAT TTTCCTCCAC 41214 | || || |||||| ||| ||||| |||| |||||||||| ||| || ||| |||||||||| CGCGAGTACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC 120 TAGGATTGGT TGGGGCGAAA GTCATCGGTA TATTAAATCC GTCAACCAAA GAAATGTCCC 41274 |||| || || |||||| ||| ||||| || | |||||||||| || || ||| |||||||||| TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC 180 AGAAATCTAG GTTGCTGAAT TGGTCCAAAG CATATTCAGC TAGGGTGTTT GGGGGTTTGC 41334 | ||||||| |||||| || |||||||| | | || || || |||||||||| |||||||||| AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC 240 CCCACCCGGT ACAGTGTAGG ACCCCACCAC AATCACCAGT TTGGCATGAA CCTCTACCAG 41394 |||| ||||| ||| |||| | || ||||||| |||||||||| || |||| | ||||| || | CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG 300 CACCATTAAA ATTGCAATTA GTACGACCCC ATATACGTGC CATCTTAGTG CCCCTCGGCG 41454 || ||||||| |||||| | |||||||||| |||||||||| ||||||||| |||||||| | CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG 360 CATTGATGAC CCATGTTTGG CCTCGATCGA 41484 |||||||||| ||||| |||| ||| || || CATTGATGAC CCATGATTGG CCTTTATTGA 390 hqPGS_C08HBa0235H18.1+_SGN-E205109- (41095 41484) ******************************************************************************** EST sequence 1048 -strand 530 n (File: SGN-E275676-) 1 TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 61 CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 121 GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 181 AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 241 CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 301 GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 361 TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATGCC 421 GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA AGTATAAGTC 481 ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT AGCCCATGTT Predicted gene structure (within gDNA segment 37634 to 43306): Exon 1 41097 41626 ( 530 n); cDNA 1 530 ( 530 n); score: 0.894 MATCH C08HBa0235H18.1+ SGN-E275676- 0.894 530 1.000 C PGS_C08HBa0235H18.1+_SGN-E275676- (41097 41626) Alignment (genomic DNA sequence = upper lines): TATTGTTGTC CTCCGAACGT GGTACAAGGG TTGTTACATC CTCCGGGTAC CCTAAGTGGA 41156 |||||||||| |||| ||||| |||||||||| |||||||||| |||| ||||| | |||| | TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 60 CTAGGGCATT CACCGTTTAT ATTAGCCGTG CAATGAATTG CATGGCATTT TCCTCCACTA 41216 | ||| |||| |||| ||||| ||| |||||| |||||||||| | || ||||| |||||||||| CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 120 GGATTGGTTG GGGCGAAAGT CATCGGTATA TTAAATCCGT CAACCAAAGA AATGTCCCAG 41276 || || |||| |||| ||||| ||| || ||| |||||||| | | || ||||| ||||||||| GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 180 AAATCTAGGT TGCTGAATTG GTCCAAAGCA TATTCAGCTA GGGTGTTTGG GGGTTTGCCC 41336 ||||||| || |||| || || |||||| || || || |||| |||||||||| |||||||||| AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 240 CACCCGGTAC AGTGTAGGAC CCCACCACAA TCACCAGTTT GGCATGAACC TCTACCAGCA 41396 || ||||||| | |||| ||| ||||||||| |||||||| | | |||| ||| ||| || ||| CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 300 CCATTAAAAT TGCAATTAGT ACGACCCCAT ATACGTGCCA TCTTAGTGCC CCTCGGCGCA 41456 ||||||| | ||||| ||| |||||||||| |||||||||| ||||||| || |||||| ||| GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 360 TTGATGACCC ATGTTTGGCC TCGATCGAGA CGTCGACCAC CGCCTATCGG GGTCGATGCT 41516 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| |||||||| TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATGCC 420 GCCCAAACGG TGTAGGGACA ATTGTTGCGT ACCTCGATAG TGGCAGCATA AGTGTAAGTC 41576 |||||||||| |||| ||||| ||||||||| ||||| |||| |||||||||| ||| |||||| GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA AGTATAAGTC 480 ACTAAAGCAA GGAAGAAGAA AATAAAAGAA GATGTCAAGT AGCCCATGTT 41626 || || || ||||||||| || ||||||| |||||||||| |||||||||| ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT AGCCCATGTT 530 hqPGS_C08HBa0235H18.1+_SGN-E275676- (41097 41626) ******************************************************************************** EST sequence 986 -strand 521 n (File: SGN-E274932-) 1 TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 61 CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 121 GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 181 AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 241 CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 301 GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 361 TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATGCC 421 GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA AGTATAAGTC 481 ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT A Predicted gene structure (within gDNA segment 37634 to 43216): Exon 1 41097 41617 ( 521 n); cDNA 1 521 ( 521 n); score: 0.893 MATCH C08HBa0235H18.1+ SGN-E274932- 0.893 521 1.000 C PGS_C08HBa0235H18.1+_SGN-E274932- (41097 41617) Alignment (genomic DNA sequence = upper lines): TATTGTTGTC CTCCGAACGT GGTACAAGGG TTGTTACATC CTCCGGGTAC CCTAAGTGGA 41156 |||||||||| |||| ||||| |||||||||| |||||||||| |||| ||||| | |||| | TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 60 CTAGGGCATT CACCGTTTAT ATTAGCCGTG CAATGAATTG CATGGCATTT TCCTCCACTA 41216 | ||| |||| |||| ||||| ||| |||||| |||||||||| | || ||||| |||||||||| CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 120 GGATTGGTTG GGGCGAAAGT CATCGGTATA TTAAATCCGT CAACCAAAGA AATGTCCCAG 41276 || || |||| |||| ||||| ||| || ||| |||||||| | | || ||||| ||||||||| GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 180 AAATCTAGGT TGCTGAATTG GTCCAAAGCA TATTCAGCTA GGGTGTTTGG GGGTTTGCCC 41336 ||||||| || |||| || || |||||| || || || |||| |||||||||| |||||||||| AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 240 CACCCGGTAC AGTGTAGGAC CCCACCACAA TCACCAGTTT GGCATGAACC TCTACCAGCA 41396 || ||||||| | |||| ||| ||||||||| |||||||| | | |||| ||| ||| || ||| CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 300 CCATTAAAAT TGCAATTAGT ACGACCCCAT ATACGTGCCA TCTTAGTGCC CCTCGGCGCA 41456 ||||||| | ||||| ||| |||||||||| |||||||||| ||||||| || |||||| ||| GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 360 TTGATGACCC ATGTTTGGCC TCGATCGAGA CGTCGACCAC CGCCTATCGG GGTCGATGCT 41516 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| |||||||| TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATGCC 420 GCCCAAACGG TGTAGGGACA ATTGTTGCGT ACCTCGATAG TGGCAGCATA AGTGTAAGTC 41576 |||||||||| |||| ||||| ||||||||| ||||| |||| |||||||||| ||| |||||| GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA AGTATAAGTC 480 ACTAAAGCAA GGAAGAAGAA AATAAAAGAA GATGTCAAGT A 41617 || || || ||||||||| || ||||||| |||||||||| | ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT A 521 hqPGS_C08HBa0235H18.1+_SGN-E274932- (41097 41617) ******************************************************************************** EST sequence 774 -strand 506 n (File: SGN-E252003-) 1 TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 61 CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 121 GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 181 AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 241 CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 301 GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 361 TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATGCC 421 GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA AGTATAAGTC 481 ACACAAAGAA GGAAGAAGAG AACAAA Predicted gene structure (within gDNA segment 37634 to 43066): Exon 1 41097 41602 ( 506 n); cDNA 1 506 ( 506 n); score: 0.889 MATCH C08HBa0235H18.1+ SGN-E252003- 0.889 506 1.000 C PGS_C08HBa0235H18.1+_SGN-E252003- (41097 41602) Alignment (genomic DNA sequence = upper lines): TATTGTTGTC CTCCGAACGT GGTACAAGGG TTGTTACATC CTCCGGGTAC CCTAAGTGGA 41156 |||||||||| |||| ||||| |||||||||| |||||||||| |||| ||||| | |||| | TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 60 CTAGGGCATT CACCGTTTAT ATTAGCCGTG CAATGAATTG CATGGCATTT TCCTCCACTA 41216 | ||| |||| |||| ||||| ||| |||||| |||||||||| | || ||||| |||||||||| CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 120 GGATTGGTTG GGGCGAAAGT CATCGGTATA TTAAATCCGT CAACCAAAGA AATGTCCCAG 41276 || || |||| |||| ||||| ||| || ||| |||||||| | | || ||||| ||||||||| GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 180 AAATCTAGGT TGCTGAATTG GTCCAAAGCA TATTCAGCTA GGGTGTTTGG GGGTTTGCCC 41336 ||||||| || |||| || || |||||| || || || |||| |||||||||| |||||||||| AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 240 CACCCGGTAC AGTGTAGGAC CCCACCACAA TCACCAGTTT GGCATGAACC TCTACCAGCA 41396 || ||||||| | |||| ||| ||||||||| |||||||| | | |||| ||| ||| || ||| CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 300 CCATTAAAAT TGCAATTAGT ACGACCCCAT ATACGTGCCA TCTTAGTGCC CCTCGGCGCA 41456 ||||||| | ||||| ||| |||||||||| |||||||||| ||||||| || |||||| ||| GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 360 TTGATGACCC ATGTTTGGCC TCGATCGAGA CGTCGACCAC CGCCTATCGG GGTCGATGCT 41516 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| |||||||| TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATGCC 420 GCCCAAACGG TGTAGGGACA ATTGTTGCGT ACCTCGATAG TGGCAGCATA AGTGTAAGTC 41576 |||||||||| |||| ||||| ||||||||| ||||| |||| |||||||||| ||| |||||| GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA AGTATAAGTC 480 ACTAAAGCAA GGAAGAAGAA AATAAA 41602 || || || ||||||||| || ||| ACACAAAGAA GGAAGAAGAG AACAAA 506 hqPGS_C08HBa0235H18.1+_SGN-E252003- (41097 41602) ******************************************************************************** EST sequence 630 -strand 418 n (File: SGN-E204875-) 1 TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC ATTAAGGGCG 61 CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 121 GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 181 AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 241 CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 301 GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 361 TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATG Predicted gene structure (within gDNA segment 37634 to 42186): Exon 1 41097 41514 ( 418 n); cDNA 1 418 ( 418 n); score: 0.890 MATCH C08HBa0235H18.1+ SGN-E204875- 0.890 418 1.000 C PGS_C08HBa0235H18.1+_SGN-E204875- (41097 41514) Alignment (genomic DNA sequence = upper lines): TATTGTTGTC CTCCGAACGT GGTACAAGGG TTGTTACATC CTCCGGGTAC CCTAAGTGGA 41156 |||||||||| |||| ||||| |||||||||| |||||||||| |||| ||||| |||| | TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC ATTAAGGGCG 60 CTAGGGCATT CACCGTTTAT ATTAGCCGTG CAATGAATTG CATGGCATTT TCCTCCACTA 41216 | ||| |||| |||| ||||| ||| |||||| |||||||||| | || ||||| |||||||||| CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 120 GGATTGGTTG GGGCGAAAGT CATCGGTATA TTAAATCCGT CAACCAAAGA AATGTCCCAG 41276 || || |||| |||| ||||| ||| || ||| |||||||| | | || ||||| ||||||||| GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 180 AAATCTAGGT TGCTGAATTG GTCCAAAGCA TATTCAGCTA GGGTGTTTGG GGGTTTGCCC 41336 ||||||| || |||| || || |||||| || || || |||| |||||||||| |||||||||| AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 240 CACCCGGTAC AGTGTAGGAC CCCACCACAA TCACCAGTTT GGCATGAACC TCTACCAGCA 41396 || ||||||| | |||| ||| ||||||||| |||||||| | | |||| ||| ||| || ||| CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 300 CCATTAAAAT TGCAATTAGT ACGACCCCAT ATACGTGCCA TCTTAGTGCC CCTCGGCGCA 41456 ||||||| | ||||| ||| |||||||||| |||||||||| ||||||| || |||||| ||| GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 360 TTGATGACCC ATGTTTGGCC TCGATCGAGA CGTCGACCAC CGCCTATCGG GGTCGATG 41514 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| ||||||| TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATG 418 hqPGS_C08HBa0235H18.1+_SGN-E204875- (41097 41514) ******************************************************************************** EST sequence 1036 -strand 467 n (File: SGN-E266663-) 1 GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACTTTA AGGGCGCGAG 61 GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT 121 TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT 181 CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC 241 CGGTACGCTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT 301 TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA 361 TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATAGGAGTC GATGCCGCCC 421 AAACGGTGTA TGGACAGTTG TATAAGTACC TCAATAGTGG CAGCATA Predicted gene structure (within gDNA segment 37674 to 42743): Exon 1 41101 41566 ( 466 n); cDNA 1 467 ( 467 n); score: 0.879 MATCH C08HBa0235H18.1+ SGN-E266663- 0.879 466 0.998 C PGS_C08HBa0235H18.1+_SGN-E266663- (41101 41566) Alignment (genomic DNA sequence = upper lines): GTTGTCCTCC GAACGTGGTA CAAGGGTTGT TACATCCTCC GGGTACCCTA AGTGGACTAG 41160 |||||||||| ||||||||| |||||||||| |||||||||| ||||| || || | | || GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACTTTA AGGGCGCGAG 60 GGCATTCACC GTTTATATTA GCCGTGCAAT GAATTGCATG GCATTTTCCT CCACTAGGAT 41220 | |||||||| |||||||| |||||||||| ||||||| || ||||||||| |||||||| | GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT 120 TGGTTGGGGC GAAAGTCATC GGTATATTAA ATCCGTCAAC CAAAGAAATG TCCCAGAAAT 41280 | |||||||| |||||||| || ||||||| |||| || || ||||||||| ||||| |||| TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT 180 CTAGGTTGCT GAATTGGTCC AAAGCATATT CAGCTAGGGT GTTTGGGGGT TTGCCCCACC 41340 ||| |||||| || |||||| || || || | | |||||||| |||||||||| |||||||| | CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC 240 CGGTACAGTG TAGGACCCCA CCACAATCAC CAGTTTGGCA TGAACCTCTA CCAGCACCAT 41400 |||||| || || ||| ||| |||||||||| |||| || || || |||||| || ||| ||| CGGTACGCTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT 300 TAAAATTGCA ATTAGTACGA CCCCATATAC GTGCCATCTT AGTGCCCCTC GGCGCATTGA 41460 |||| ||||| | ||||||| |||||||||| |||||||||| ||| |||||| || ||||||| TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA 360 TGACCCATGT TTGGCCTCGA TCGAGACGTC GACCACCGCC TATCGGGGTC GATGCTGCCC 41520 |||||||||| |||||||||| | |||||||| |||||||||| ||| || ||| ||||| |||| TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATAGGAGTC GATGCCGCCC 420 AAACGGTGTA GGGACAATTG T-TGCGTACC TCGATAGTGG CAGCATA 41566 |||||||||| ||||| ||| | | ||||| || ||||||| ||||||| AAACGGTGTA TGGACAGTTG TATAAGTACC TCAATAGTGG CAGCATA 467 hqPGS_C08HBa0235H18.1+_SGN-E266663- (41101 41566) ******************************************************************************** EST sequence 1012 -strand 524 n (File: SGN-E246947-) 1 GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC 61 ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG 121 TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA 181 AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG 241 TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA 301 AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA 361 CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA 421 CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA 481 GAAGGAAGAA GAGAACAAAA GAAGATGTCA AGTAGCCCAT GTTT Predicted gene structure (within gDNA segment 37704 to 43316): Exon 1 41104 41627 ( 524 n); cDNA 1 524 ( 524 n); score: 0.893 MATCH C08HBa0235H18.1+ SGN-E246947- 0.893 524 1.000 C PGS_C08HBa0235H18.1+_SGN-E246947- (41104 41627) Alignment (genomic DNA sequence = upper lines): GTCCTCCGAA CGTGGTACAA GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GGACTAGGGC 41163 ||||||| || |||||||||| |||||||||| ||||||| || |||| |||| | | ||| | GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC 60 ATTCACCGTT TATATTAGCC GTGCAATGAA TTGCATGGCA TTTTCCTCCA CTAGGATTGG 41223 ||||||| || |||||| ||| |||||||||| |||| || || |||||||||| ||||| || | ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG 120 TTGGGGCGAA AGTCATCGGT ATATTAAATC CGTCAACCAA AGAAATGTCC CAGAAATCTA 41283 ||||||| || |||||| || |||||||||| | || || || |||||||||| || ||||||| TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA 180 GGTTGCTGAA TTGGTCCAAA GCATATTCAG CTAGGGTGTT TGGGGGTTTG CCCCACCCGG 41343 |||||| || |||||||| || || || | |||||||||| |||||||||| ||||| |||| AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG 240 TACAGTGTAG GACCCCACCA CAATCACCAG TTTGGCATGA ACCTCTACCA GCACCATTAA 41403 |||| |||| ||| |||||| |||||||||| | || |||| |||||| || ||| |||||| TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA 300 AATTGCAATT AGTACGACCC CATATACGTG CCATCTTAGT GCCCCTCGGC GCATTGATGA 41463 | |||||| |||||||||| |||||||||| |||||||||| |||||||| |||||||||| AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA 360 CCCATGTTTG GCCTCGATCG AGACGTCGAC CACCGCCTAT CGGGGTCGAT GCTGCCCAAA 41523 |||||||||| |||||||| | |||||||||| |||||||||| ||| |||||| || ||||||| CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA 420 CGGTGTAGGG ACAATTGTTG CGTACCTCGA TAGTGGCAGC ATAAGTGTAA GTCACTAAAG 41583 ||||||| || ||| |||||| |||||||| | |||||||||| |||||| ||| ||||| || CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA 480 CAAGGAAGAA GAAAATAAAA GAAGATGTCA AGTAGCCCAT GTTT 41627 ||||||||| || || |||| |||||||||| |||||||||| |||| GAAGGAAGAA GAGAACAAAA GAAGATGTCA AGTAGCCCAT GTTT 524 hqPGS_C08HBa0235H18.1+_SGN-E246947- (41104 41627) ******************************************************************************** EST sequence 717 -strand 528 n (File: SGN-E304108-) 1 CGAATGTAGT ACAAGGGTTG TTACATCCTC CGGGTACCCT AAGTGAACCA GGGCATTCAC 61 CGTTTATATT AGCAACACAT TGAATTGGAT GACATTTTCC CGGCCCAGGG TTAGTTGGGC 121 CGAAAGACAT AGGGATGTTG AATCCATCAA TAACAGAAAT GTCCCAGAAA TCTAAGTTGC 181 TAAATTGATT CAAAGCGTAT TCAGCTAAGG TGTTTGGTGG TTTACCCCAT CCTTTGCATT 241 CCAAGACTCC ACCACAATCA CCGGTCTGGC ACCAACCTCT ACCAGCACCA TCAAAATTGC 301 AATTAGTACG ACCCCAAATA CGTGCCATTT TGGTGCCCGG TGGAGCCCAA AACCACCAAC 361 TTTGACCTCT CTCGAGACGT CGGCCACCTC CTACGGGAGT CGCCGCTGCC CATACGGTGT 421 ATGGACAGTT GTTATGGACC TCAAATACAC CGGAAGCATA AGTGTAAGTC ACAAAGGCAA 481 GGAGAAAGAA CACTAAACAA GTTGTCAAAT GACTCATTTT AGAATAAA Predicted gene structure (within gDNA segment 40428 to 44145): Exon 1 41110 41632 ( 523 n); cDNA 1 526 ( 526 n); score: 0.787 MATCH C08HBa0235H18.1+ SGN-E304108- 0.787 523 0.991 C PGS_C08HBa0235H18.1+_SGN-E304108- (41110 41632) Alignment (genomic DNA sequence = upper lines): CGAACGTGGT ACAAGGGTTG TTACATCCTC CGGGTACCCT AAGTGGACTA GGGCATTCAC 41169 |||| || || |||||||||| |||||||||| |||||||||| ||||| || | |||||||||| CGAATGTAGT ACAAGGGTTG TTACATCCTC CGGGTACCCT AAGTGAACCA GGGCATTCAC 60 CGTTTATATT AGCCGTGCAA TGAATTGCAT GGCATTTTCC TCCACTAGGA TTGGTTGGGG 41229 |||||||||| ||| || ||||||| || | |||||||| | ||| || |||||| CGTTTATATT AGCAACACAT TGAATTGGAT GACATTTTCC CGGCCCAGGG TTAGTTGGGC 120 CGAAAGTCAT CGGTATATTA AATCCGTCAA CCAAAGAAAT GTCCCAGAAA TCTAGGTTGC 41289 |||||| ||| || || || ||||| |||| | |||||| |||||||||| |||| ||||| CGAAAGACAT AGGGATGTTG AATCCATCAA TAACAGAAAT GTCCCAGAAA TCTAAGTTGC 180 TGAATTGGTC CAAAGCATAT TCAGCTAGGG TGTTTGGGGG TTTGCCCCAC CCGGTACAGT 41349 | ||||| | |||||| ||| ||||||| || ||||||| || ||| ||||| || | || | TAAATTGATT CAAAGCGTAT TCAGCTAAGG TGTTTGGTGG TTTACCCCAT CCTTTGCATT 240 GTAGGACCCC ACCACAATCA CCAGTTTGGC ATGAACCTCT ACCAGCACCA TTAAAATTGC 41409 | ||| || |||||||||| || || |||| | ||||||| |||||||||| | |||||||| CCAAGACTCC ACCACAATCA CCGGTCTGGC ACCAACCTCT ACCAGCACCA TCAAAATTGC 300 AATTAGTACG ACCCCATATA CGTGCCATCT TAGTGCCCCT CGGCGCATTG ATGACCCATG 41469 |||||||||| |||||| ||| |||||||| | | |||||| || || | ||| AATTAGTACG ACCCCAAATA CGTGCCATTT TGGTGCCCGG TGGAGCCCAA AACCACCAAC 360 TTTGGCCTCG ATCGAGACGT CGACCACCGC CTATCGGGGT CGATGCTGCC CAAACGGTGT 41529 |||| |||| ||||||||| || ||||| | ||| || || || |||||| || ||||||| TTTGACCTCT CTCGAGACGT CGGCCACCTC CTACGGGAGT CGCCGCTGCC CATACGGTGT 420 AGGGACAATT GTTGCGTACC TC-GATA--G TGGCAGCATA AGTGTAAGTC ACTAAAGCAA 41586 | ||||| || ||| | ||| || ||| || |||||| |||||||||| || || |||| ATGGACAGTT GTTATGGACC TCAAATACAC CGGAAGCATA AGTGTAAGTC ACAAAGGCAA 480 GGAAGAAGAA AATAAAAGAA GATGTCAAGT AGCCCATGTT TGTGTA 41632 ||| ||||| | ||| || | |||||| | | ||| || | || GGAGAAAGAA CACTAAACAA GTTGTCAAAT GACTCATTTT AGAATA 526 hqPGS_C08HBa0235H18.1+_SGN-E304108- (41110 41632) ******************************************************************************** EST sequence 766 -strand 518 n (File: SGN-E214938-) 1 AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC 61 ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 121 AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 181 AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 241 TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 301 ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 361 TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA 421 TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA 481 GAAGAGAACA AAAGAAGATG TCAAGTAGCC CATGTTTG Predicted gene structure (within gDNA segment 37774 to 43326): Exon 1 41112 41628 ( 517 n); cDNA 2 518 ( 517 n); score: 0.894 MATCH C08HBa0235H18.1+ SGN-E214938- 0.894 517 0.998 C PGS_C08HBa0235H18.1+_SGN-E214938- (41112 41628) Alignment (genomic DNA sequence = upper lines): AACGTGGTAC AAGGGTTGTT ACATCCTCCG GGTACCCTAA GTGGACTAGG GCATTCACCG 41171 |||||||||| |||||||||| ||||||||| |||||| ||| | | | ||| |||||||| AACGTGGTAC AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG ACATTCACCA 61 TTTATATTAG CCGTGCAATG AATTGCATGG CATTTTCCTC CACTAGGATT GGTTGGGGCG 41231 |||||||| | |||||||||| |||||| || |||||||||| ||||||| || |||||||| TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT TGTTGGGGCA 121 AAAGTCATCG GTATATTAAA TCCGTCAACC AAAGAAATGT CCCAGAAATC TAGGTTGCTG 41291 |||||||| | | |||||||| ||| || || |||||||||| |||| ||||| || |||||| AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA 181 AATTGGTCCA AAGCATATTC AGCTAGGGTG TTTGGGGGTT TGCCCCACCC GGTACAGTGT 41351 || ||||||| | || || || ||||||||| |||||||||| ||||||| || |||||| ||| AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC GGTACACTGT 241 AGGACCCCAC CACAATCACC AGTTTGGCAT GAACCTCTAC CAGCACCATT AAAATTGCAA 41411 | ||| |||| |||||||||| ||| || ||| | |||||| | | ||| |||| ||| |||||| AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT AAAGTTGCAA 301 TTAGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GCGCATTGAT GACCCATGTT 41471 |||||||| |||||||||| |||||||||| || ||||||| | |||||||| |||||||||| CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT GACCCATGTT 361 TGGCCTCGAT CGAGACGTCG ACCACCGCCT ATCGGGGTCG ATGCTGCCCA AACGGTGTAG 41531 |||||||||| ||||||||| |||||||||| ||||| |||| |||| ||||| ||||||||| TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA AACGGTGTAT 421 GGACAATTGT TGCGTACCTC GATAGTGGCA GCATAAGTGT AAGTCACTAA AGCAAGGAAG 41591 ||||| |||| |||||||||| ||||||||| |||||||| | ||||||| | | ||||||| GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAAGTAT AAGTCACACA AAGAAGGAAG 481 AAGAAAATAA AAGAAGATGT CAAGTAGCCC ATGTTTG 41628 |||| || || |||||||||| |||||||||| ||||||| AAGAGAACAA AAGAAGATGT CAAGTAGCCC ATGTTTG 518 hqPGS_C08HBa0235H18.1+_SGN-E214938- (41112 41628) ******************************************************************************** EST sequence 675 -strand 457 n (File: SGN-E203662-) 1 AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC 61 ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 121 AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 181 AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 241 TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 301 ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 361 TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA 421 TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAA Predicted gene structure (within gDNA segment 37774 to 42716): Exon 1 41112 41567 ( 456 n); cDNA 2 457 ( 456 n); score: 0.895 MATCH C08HBa0235H18.1+ SGN-E203662- 0.895 456 0.998 C PGS_C08HBa0235H18.1+_SGN-E203662- (41112 41567) Alignment (genomic DNA sequence = upper lines): AACGTGGTAC AAGGGTTGTT ACATCCTCCG GGTACCCTAA GTGGACTAGG GCATTCACCG 41171 |||||||||| |||||||||| ||||||||| |||||| ||| | | | ||| |||||||| AACGTGGTAC AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG ACATTCACCA 61 TTTATATTAG CCGTGCAATG AATTGCATGG CATTTTCCTC CACTAGGATT GGTTGGGGCG 41231 |||||||| | |||||||||| |||||| || |||||||||| ||||||| || |||||||| TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT TGTTGGGGCA 121 AAAGTCATCG GTATATTAAA TCCGTCAACC AAAGAAATGT CCCAGAAATC TAGGTTGCTG 41291 |||||||| | | |||||||| ||| || || |||||||||| |||| ||||| || |||||| AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA 181 AATTGGTCCA AAGCATATTC AGCTAGGGTG TTTGGGGGTT TGCCCCACCC GGTACAGTGT 41351 || ||||||| | || || || ||||||||| |||||||||| ||||||| || |||||| ||| AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC GGTACACTGT 241 AGGACCCCAC CACAATCACC AGTTTGGCAT GAACCTCTAC CAGCACCATT AAAATTGCAA 41411 | ||| |||| |||||||||| ||| || ||| | |||||| | | ||| |||| ||| |||||| AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT AAAGTTGCAA 301 TTAGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GCGCATTGAT GACCCATGTT 41471 |||||||| |||||||||| |||||||||| || ||||||| | |||||||| |||||||||| CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT GACCCATGTT 361 TGGCCTCGAT CGAGACGTCG ACCACCGCCT ATCGGGGTCG ATGCTGCCCA AACGGTGTAG 41531 |||||||||| ||||||||| |||||||||| ||||| |||| |||| ||||| ||||||||| TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA AACGGTGTAT 421 GGACAATTGT TGCGTACCTC GATAGTGGCA GCATAA 41567 ||||| |||| |||||||||| ||||||||| |||||| GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAA 457 hqPGS_C08HBa0235H18.1+_SGN-E203662- (41112 41567) ******************************************************************************** EST sequence 666 -strand 490 n (File: SGN-E204618-) 1 CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC ATTTATATTG 61 CCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC AAAAGTCATT 121 GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT AAACTGGTCC 181 AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG TAAGACTCCT 241 CCACAATCAC CAGTTTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA ACCAGTACGA 301 CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT TTGGCCTCGA 361 TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA TGGACAGTTG 421 TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA GAACAGAACA 481 AAAGAAGATG Predicted gene structure (within gDNA segment 37874 to 43146): Exon 1 41121 41610 ( 490 n); cDNA 1 490 ( 490 n); score: 0.884 MATCH C08HBa0235H18.1+ SGN-E204618- 0.884 490 1.000 C PGS_C08HBa0235H18.1+_SGN-E204618- (41121 41610) Alignment (genomic DNA sequence = upper lines): CAAGGGTTGT TACATCCTCC GGGTACCCTA AGTGGACTAG GGCATTCACC GTTTATATTA 41180 |||||||||| |||||||||| |||||| || || | | || | |||||||| |||||||| CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC ATTTATATTG 60 GCCGTGCAAT GAATTGCATG GCATTTTCCT CCACTAGGAT TGGTTGGGGC GAAAGTCATC 41240 ||||||||| ||||||| || ||||||||| |||||||| | | |||||||| |||||||| CCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC AAAAGTCATT 120 GGTATATTAA ATCCGTCAAC CAAAGAAATG TCCCAGAAAT CTAGGTTGCT GAATTGGTCC 41300 || ||||||| |||| || || ||||||||| ||||| |||| ||| |||||| || |||||| GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT AAACTGGTCC 180 AAAGCATATT CAGCTAGGGT GTTTGGGGGT TTGCCCCACC CGGTACAGTG TAGGACCCCA 41360 || || || | | |||||||| |||||||||| |||||||| | ||||||| || || ||| || AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG TAAGACTCCT 240 CCACAATCAC CAGTTTGGCA TGAACCTCTA CCAGCACCAT TAAAATTGCA ATTAGTACGA 41420 |||||||||| ||||||| || || |||||| || ||| ||| |||| ||||| | ||||||| CCACAATCAC CAGTTTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA ACCAGTACGA 300 CCCCATATAC GTGCCATCTT AGTGCCCCTC GGCGCATTGA TGACCCATGT TTGGCCTCGA 41480 |||||||||| |||||||||| ||| |||||| || ||||||| |||||||||| |||||||||| CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT TTGGCCTCGA 360 TCGAGACGTC GACCACCGCC TATCGGGGTC GATGCTGCCC AAACGGTGTA GGGACAATTG 41540 | |||||||| |||||||||| |||||| ||| ||||| |||| |||||||||| ||||| ||| TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA TGGACAGTTG 420 TTGCGTACCT CGATAGTGGC AGCATAAGTG TAAGTCACTA AAGCAAGGAA GAAGAAAATA 41600 |||||||||| | |||||||| ||||||||| |||||||| || |||||| ||| | || | TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA GAACAGAACA 480 AAAGAAGATG 41610 |||||||||| AAAGAAGATG 490 hqPGS_C08HBa0235H18.1+_SGN-E204618- (41121 41610) ******************************************************************************** EST sequence 843 -strand 467 n (File: SGN-E202224-) 1 CAAGGGTTGT TACATCCTCC AGGTCCTTTA AGGGCGCGAG GACATTCACC ATTTATATTG 61 GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC AAAAGTCATT 121 GCAATATTAA ATCCATGGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT AAACTGGTCC 181 AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG TAAGACTCCA 241 CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA ACCAGTACGA 301 CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT TTGGCCTCGA 361 TTGAGACGTC GACCACCGCC TATCGGAGTA GATGCCGCCC AAACGGTGTA TGGACAGTTG 421 TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAG Predicted gene structure (within gDNA segment 37874 to 42916): Exon 1 41121 41587 ( 467 n); cDNA 1 467 ( 467 n); score: 0.876 MATCH C08HBa0235H18.1+ SGN-E202224- 0.876 467 1.000 C PGS_C08HBa0235H18.1+_SGN-E202224- (41121 41587) Alignment (genomic DNA sequence = upper lines): CAAGGGTTGT TACATCCTCC GGGTACCCTA AGTGGACTAG GGCATTCACC GTTTATATTA 41180 |||||||||| |||||||||| ||| | || || | | || | |||||||| |||||||| CAAGGGTTGT TACATCCTCC AGGTCCTTTA AGGGCGCGAG GACATTCACC ATTTATATTG 60 GCCGTGCAAT GAATTGCATG GCATTTTCCT CCACTAGGAT TGGTTGGGGC GAAAGTCATC 41240 |||||||||| ||||||| || ||||||||| |||||||| | | |||||||| |||||||| GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC AAAAGTCATT 120 GGTATATTAA ATCCGTCAAC CAAAGAAATG TCCCAGAAAT CTAGGTTGCT GAATTGGTCC 41300 | ||||||| |||| | || ||||||||| ||||| |||| ||| |||||| || |||||| GCAATATTAA ATCCATGGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT AAACTGGTCC 180 AAAGCATATT CAGCTAGGGT GTTTGGGGGT TTGCCCCACC CGGTACAGTG TAGGACCCCA 41360 || || || | | |||||||| |||||||||| |||||||| | ||||||| || || ||| ||| AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG TAAGACTCCA 240 CCACAATCAC CAGTTTGGCA TGAACCTCTA CCAGCACCAT TAAAATTGCA ATTAGTACGA 41420 |||||||||| |||| || || || |||||| || ||| ||| |||| ||||| | ||||||| CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA ACCAGTACGA 300 CCCCATATAC GTGCCATCTT AGTGCCCCTC GGCGCATTGA TGACCCATGT TTGGCCTCGA 41480 |||||||||| |||||||||| ||| |||||| || ||||||| |||||||||| |||||||||| CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT TTGGCCTCGA 360 TCGAGACGTC GACCACCGCC TATCGGGGTC GATGCTGCCC AAACGGTGTA GGGACAATTG 41540 | |||||||| |||||||||| |||||| || ||||| |||| |||||||||| ||||| ||| TTGAGACGTC GACCACCGCC TATCGGAGTA GATGCCGCCC AAACGGTGTA TGGACAGTTG 420 TTGCGTACCT CGATAGTGGC AGCATAAGTG TAAGTCACTA AAGCAAG 41587 |||||||||| | |||||||| ||||||||| |||||||| || ||| TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAG 467 hqPGS_C08HBa0235H18.1+_SGN-E202224- (41121 41587) ******************************************************************************** EST sequence 857 -strand 436 n (File: SGN-E206535-) 1 AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC 61 CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG 121 AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA 181 GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC 241 ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC 301 CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG ACCCATGTTT GGCCTCGATT 361 GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA ACGGTGTATG GACAGTTGTT 421 GCGTACCTCA ATAGTG Predicted gene structure (within gDNA segment 37894 to 42626): Exon 1 41123 41558 ( 436 n); cDNA 1 436 ( 436 n); score: 0.890 MATCH C08HBa0235H18.1+ SGN-E206535- 0.890 436 1.000 C PGS_C08HBa0235H18.1+_SGN-E206535- (41123 41558) Alignment (genomic DNA sequence = upper lines): AGGGTTGTTA CATCCTCCGG GTACCCTAAG TGGACTAGGG CATTCACCGT TTATATTAGC 41182 |||||||||| |||||||| | ||||| |||| | | ||| |||||||| | ||||||| || AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC 60 CGTGCAATGA ATTGCATGGC ATTTTCCTCC ACTAGGATTG GTTGGGGCGA AAGTCATCGG 41242 |||||||||| ||||| || | |||||||||| |||||| || |||||||| | ||||||| || CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG 120 TATATTAAAT CCGTCAACCA AAGAAATGTC CCAGAAATCT AGGTTGCTGA ATTGGTCCAA 41302 ||||||||| || || || | |||||||||| ||| |||||| | |||||| | | |||||||| AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA 180 AGCATATTCA GCTAGGGTGT TTGGGGGTTT GCCCCACCCG GTACAGTGTA GGACCCCACC 41362 || || || |||||||||| |||||||||| |||||| ||| ||||| |||| ||| ||||| GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC 240 ACAATCACCA GTTTGGCATG AACCTCTACC AGCACCATTA AAATTGCAAT TAGTACGACC 41422 |||||||||| || || |||| |||||| || ||| ||||| || |||||| ||||||||| ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC 300 CCATATACGT GCCATCTTAG TGCCCCTCGG CGCATTGATG ACCCATGTTT GGCCTCGATC 41482 |||||||||| |||||||||| | |||||||| ||||||||| |||||||||| ||||||||| CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG ACCCATGTTT GGCCTCGATT 360 GAGACGTCGA CCACCGCCTA TCGGGGTCGA TGCTGCCCAA ACGGTGTAGG GACAATTGTT 41542 |||||||||| |||||||||| |||| ||||| ||| |||||| |||||||| | |||| ||||| GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA ACGGTGTATG GACAGTTGTT 420 GCGTACCTCG ATAGTG 41558 ||||||||| |||||| GCGTACCTCA ATAGTG 436 hqPGS_C08HBa0235H18.1+_SGN-E206535- (41123 41558) ******************************************************************************** EST sequence 917 -strand 502 n (File: SGN-E274566-) 1 GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC 61 GTGCAATGAA TTGCGTGACA TTTTCCTTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG 121 AATATTAAAT CCATCGGCTA AAGTAATGTC CCAAAAATGT AAGTTGCTCA ACTGGTCCAA 181 GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC 241 ACAATCACCA GTGTGACATG TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTCCGACC 301 CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG ACCCATGTTT GGCCTCGATT 361 GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA ACGGTGTATG GACAGTTGTT 421 GTGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACCCAA AGAAGGAAGA AGAGACCAAA 481 AGAAGATGTC TAGTAGGCCA TG Predicted gene structure (within gDNA segment 37858 to 43286): Exon 1 41124 41624 ( 501 n); cDNA 1 502 ( 502 n); score: 0.869 MATCH C08HBa0235H18.1+ SGN-E274566- 0.869 501 0.998 C PGS_C08HBa0235H18.1+_SGN-E274566- (41124 41624) Alignment (genomic DNA sequence = upper lines): GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GGACTAGGGC ATTCACCGTT TATATTAGCC 41183 |||||||||| ||||||| || |||| |||| | | ||| | ||||||| || |||||| ||| GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC 60 GTGCAATGAA TTGCATGGCA TTTTCC-TCC ACTAGGATTG GTTGGGGCGA AAGTCATCGG 41242 |||||||||| |||| || || |||||| ||| |||||| || |||||||| | ||||||| || GTGCAATGAA TTGCGTGACA TTTTCCTTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG 120 TATATTAAAT CCGTCAACCA AAGAAATGTC CCAGAAATCT AGGTTGCTGA ATTGGTCCAA 41302 ||||||||| || || | | ||| |||||| ||| |||| | | |||||| | | |||||||| AATATTAAAT CCATCGGCTA AAGTAATGTC CCAAAAATGT AAGTTGCTCA ACTGGTCCAA 180 AGCATATTCA GCTAGGGTGT TTGGGGGTTT GCCCCACCCG GTACAGTGTA GGACCCCACC 41362 || || || |||||||||| |||||||||| |||||| ||| ||||| |||| ||| ||||| GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC 240 ACAATCACCA GTTTGGCATG AACCTCTACC AGCACCATTA AAATTGCAAT TAGTACGACC 41422 |||||||||| || || |||| |||||| || ||| ||||| || |||||| ||| ||||| ACAATCACCA GTGTGACATG TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTCCGACC 300 CCATATACGT GCCATCTTAG TGCCCCTCGG CGCATTGATG ACCCATGTTT GGCCTCGATC 41482 |||||||||| |||||||||| | |||||||| ||||||||| |||||||||| ||||||||| CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG ACCCATGTTT GGCCTCGATT 360 GAGACGTCGA CCACCGCCTA TCGGGGTCGA TGCTGCCCAA ACGGTGTAGG GACAATTGTT 41542 |||||||||| |||||||||| |||| ||||| ||| |||||| |||||||| | |||| ||||| GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA ACGGTGTATG GACAGTTGTT 420 GCGTACCTCG ATAGTGGCAG CATAAGTGTA AGTCACTAAA GCAAGGAAGA AGAAAATAAA 41602 | ||||||| |||||||||| ||||||| || |||||| || |||||||| ||| | ||| GTGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACCCAA AGAAGGAAGA AGAGACCAAA 480 AGAAGATGTC AAGTAGCCCA TG 41624 |||||||||| ||||| ||| || AGAAGATGTC TAGTAGGCCA TG 502 hqPGS_C08HBa0235H18.1+_SGN-E274566- (41124 41624) ******************************************************************************** EST sequence 1206 -strand 487 n (File: SGN-E209259-) 1 GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC 61 GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 121 ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 181 GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 241 CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 301 CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 361 AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG 421 CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA 481 GAAGATG Predicted gene structure (within gDNA segment 37904 to 43146): Exon 1 41124 41610 ( 487 n); cDNA 1 487 ( 487 n); score: 0.887 MATCH C08HBa0235H18.1+ SGN-E209259- 0.887 487 1.000 C PGS_C08HBa0235H18.1+_SGN-E209259- (41124 41610) Alignment (genomic DNA sequence = upper lines): GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GGACTAGGGC ATTCACCGTT TATATTAGCC 41183 |||||||||| ||||||| || |||| |||| | | ||| | ||||||| || |||||| ||| GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC 60 GTGCAATGAA TTGCATGGCA TTTTCCTCCA CTAGGATTGG TTGGGGCGAA AGTCATCGGT 41243 |||||||||| |||| || || |||||||||| ||||| || | ||||||| || |||||| || GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 120 ATATTAAATC CGTCAACCAA AGAAATGTCC CAGAAATCTA GGTTGCTGAA TTGGTCCAAA 41303 |||||||||| | || || || |||||||||| || ||||||| |||||| || |||||||| ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 180 GCATATTCAG CTAGGGTGTT TGGGGGTTTG CCCCACCCGG TACAGTGTAG GACCCCACCA 41363 || || || | |||||||||| |||||||||| ||||| |||| |||| |||| ||| |||||| GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 240 CAATCACCAG TTTGGCATGA ACCTCTACCA GCACCATTAA AATTGCAATT AGTACGACCC 41423 |||||||||| | || |||| |||||| || ||| |||||| | |||||| |||||||||| CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 300 CATATACGTG CCATCTTAGT GCCCCTCGGC GCATTGATGA CCCATGTTTG GCCTCGATCG 41483 |||||||||| |||||||||| |||||||| |||||||||| |||||||||| |||||||| | CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 360 AGACGTCGAC CACCGCCTAT CGGGGTCGAT GCTGCCCAAA CGGTGTAGGG ACAATTGTTG 41543 |||||||||| |||||||||| ||| |||||| || ||||||| ||||||| || ||| |||||| AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG 420 CGTACCTCGA TAGTGGCAGC ATAAGTGTAA GTCACTAAAG CAAGGAAGAA GAAAATAAAA 41603 |||||||| | |||||||||| |||||| ||| ||||| || ||||||||| || || |||| CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA 480 GAAGATG 41610 ||||||| GAAGATG 487 hqPGS_C08HBa0235H18.1+_SGN-E209259- (41124 41610) ******************************************************************************** EST sequence 828 -strand 493 n (File: SGN-E205594-) 1 GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT 61 GCAATGAATT GCGTGACATT TTCCTCCATT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT 121 ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC 181 GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA 241 ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA 301 TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG 361 ACGTCGACCA CCGCCTATCG GAGTTGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG 421 TACCTCAATA GTGGCAGCAT AAGCACCAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA 481 AGATGTCAAG TAG Predicted gene structure (within gDNA segment 37924 to 43226): Exon 1 41126 41618 ( 493 n); cDNA 1 493 ( 493 n); score: 0.878 MATCH C08HBa0235H18.1+ SGN-E205594- 0.878 493 1.000 C PGS_C08HBa0235H18.1+_SGN-E205594- (41126 41618) Alignment (genomic DNA sequence = upper lines): GTTGTTACAT CCTCCGGGTA CCCTAAGTGG ACTAGGGCAT TCACCGTTTA TATTAGCCGT 41185 |||||||||| ||||| |||| || |||| | | ||| ||| ||||| |||| |||| ||||| GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT 60 GCAATGAATT GCATGGCATT TTCCTCCACT AGGATTGGTT GGGGCGAAAG TCATCGGTAT 41245 |||||||||| || || |||| |||||||| | ||| || ||| ||||| |||| |||| || || GCAATGAATT GCGTGACATT TTCCTCCATT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT 120 ATTAAATCCG TCAACCAAAG AAATGTCCCA GAAATCTAGG TTGCTGAATT GGTCCAAAGC 41305 ||||||||| || || |||| |||||||||| ||||||| | ||||| || | ||||||| || ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC 180 ATATTCAGCT AGGGTGTTTG GGGGTTTGCC CCACCCGGTA CAGTGTAGGA CCCCACCACA 41365 || || ||| |||||||||| |||||||||| ||| |||||| || |||| || | |||||||| GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA 240 ATCACCAGTT TGGCATGAAC CTCTACCAGC ACCATTAAAA TTGCAATTAG TACGACCCCA 41425 ||||||||| || |||| || |||| || || | ||||||| |||||| || |||||||||| ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA 300 TATACGTGCC ATCTTAGTGC CCCTCGGCGC ATTGATGACC CATGTTTGGC CTCGATCGAG 41485 |||||||||| |||||||| | ||||||| || |||||||||| |||||||||| |||||| ||| TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG 360 ACGTCGACCA CCGCCTATCG GGGTCGATGC TGCCCAAACG GTGTAGGGAC AATTGTTGCG 41545 |||||||||| |||||||||| | || ||||| ||||||||| ||||| |||| | |||||||| ACGTCGACCA CCGCCTATCG GAGTTGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG 420 TACCTCGATA GTGGCAGCAT AAGTGTAAGT CACTAAAGCA AGGAAGAAGA AAATAAAAGA 41605 |||||| ||| |||||||||| ||| ||| ||| || | |||||||||| || |||||| TACCTCAATA GTGGCAGCAT AAGCACCAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA 480 AGATGTCAAG TAG 41618 |||||||||| ||| AGATGTCAAG TAG 493 hqPGS_C08HBa0235H18.1+_SGN-E205594- (41126 41618) ******************************************************************************** EST sequence 891 -strand 455 n (File: SGN-E205290-) 1 GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT 61 GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT 121 ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC 181 GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA 241 ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA 301 TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG 361 ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG GTGTATCCAC AGTTGTTGCG 421 TACCTCAATA GTGGCAGCAT AAGTATAAGT CACAC Predicted gene structure (within gDNA segment 37924 to 42846): Exon 1 41126 41578 ( 453 n); cDNA 1 453 ( 453 n); score: 0.887 MATCH C08HBa0235H18.1+ SGN-E205290- 0.887 453 0.996 C PGS_C08HBa0235H18.1+_SGN-E205290- (41126 41578) Alignment (genomic DNA sequence = upper lines): GTTGTTACAT CCTCCGGGTA CCCTAAGTGG ACTAGGGCAT TCACCGTTTA TATTAGCCGT 41185 |||||||||| ||||| |||| || |||| | | ||| ||| ||||| |||| |||| ||||| GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT 60 GCAATGAATT GCATGGCATT TTCCTCCACT AGGATTGGTT GGGGCGAAAG TCATCGGTAT 41245 |||||||||| || || |||| |||||||||| ||| || ||| ||||| |||| |||| || || GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT 120 ATTAAATCCG TCAACCAAAG AAATGTCCCA GAAATCTAGG TTGCTGAATT GGTCCAAAGC 41305 ||||||||| || || |||| |||||||||| ||||||| | ||||| || | ||||||| || ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC 180 ATATTCAGCT AGGGTGTTTG GGGGTTTGCC CCACCCGGTA CAGTGTAGGA CCCCACCACA 41365 || || ||| |||||||||| |||||||||| ||| |||||| || |||| || | |||||||| GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA 240 ATCACCAGTT TGGCATGAAC CTCTACCAGC ACCATTAAAA TTGCAATTAG TACGACCCCA 41425 ||||||||| || |||| || |||| || || | ||||||| |||||| || |||||||||| ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA 300 TATACGTGCC ATCTTAGTGC CCCTCGGCGC ATTGATGACC CATGTTTGGC CTCGATCGAG 41485 |||||||||| |||||||| | ||||||| || |||||||||| |||||||||| |||||| ||| TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG 360 ACGTCGACCA CCGCCTATCG GGGTCGATGC TGCCCAAACG GTGTAGGGAC AATTGTTGCG 41545 |||||||||| |||||||||| | |||||||| ||||||||| ||||| || | |||||||| ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG GTGTATCCAC AGTTGTTGCG 420 TACCTCGATA GTGGCAGCAT AAGTGTAAGT CAC 41578 |||||| ||| |||||||||| |||| ||||| ||| TACCTCAATA GTGGCAGCAT AAGTATAAGT CAC 453 hqPGS_C08HBa0235H18.1+_SGN-E205290- (41126 41578) ******************************************************************************** EST sequence 950 -strand 513 n (File: SGN-E207077-) 1 ATTGTTACAT CTCCGGGTAC CCTAANGTGA ACCAGGACAT TCACCATTTA TATTAGCCGT 61 ACAATGAATT GCATGGCATT TCCCTCCACT AGGATTGGTC GGGGCGAAAG TCATTGGAAT 121 ATTAAATCCA TCGACTAAAG AAATGTCCCA GAAATCTAGG TTGCTAAACT GGTCCAAGGC 181 GTACTCGGCC AGGGTGTTTG GTGGTTTGCC CCACCCGGTA CATTGCAAGA CCCCACCACA 241 ATCACCAGTC TGACATGAAC CTCTACCAGC ACCATCAAAG TTGCAATTCG TACGACCCCA 301 TATACGTGCC ATCTTAGTGC CCCTCGGTGC ATTGATGACC CATGTTTGGC CTCGATCAAG 361 ACGTCGACCA CCGCCTATTG GGGTCGACGC CGCCCAGACG GTGTATGGAC AGTTGTTGCG 421 TACCTCGAAA GTGGCAGCAT AAGTGTAAGT CACAAAAGCA AGAAGGAAGA AAACAAAAGA 481 AGATCTCAAG TAGGCCATGT TTGTGGAACT ATT Predicted gene structure (within gDNA segment 39967 to 42778): Exon 1 41127 41638 ( 512 n); cDNA 2 513 ( 512 n); score: 0.903 MATCH C08HBa0235H18.1+ SGN-E207077- 0.903 512 0.998 C PGS_C08HBa0235H18.1+_SGN-E207077- (41127 41638) Alignment (genomic DNA sequence = upper lines): TTGTTACATC CTCCGGGTAC CCTAA-GTGG ACTAGGGCAT TCACCGTTTA TATTAGCCGT 41185 ||||||||| |||||||||| ||||| ||| || ||| ||| ||||| |||| |||||||||| TTGTTACAT- CTCCGGGTAC CCTAANGTGA ACCAGGACAT TCACCATTTA TATTAGCCGT 60 GCAATGAATT GCATGGCATT TTCCTCCACT AGGATTGGTT GGGGCGAAAG TCATCGGTAT 41245 ||||||||| |||||||||| | |||||||| ||||||||| |||||||||| |||| || || ACAATGAATT GCATGGCATT TCCCTCCACT AGGATTGGTC GGGGCGAAAG TCATTGGAAT 120 ATTAAATCCG TCAACCAAAG AAATGTCCCA GAAATCTAGG TTGCTGAATT GGTCCAAAGC 41305 ||||||||| || || |||| |||||||||| |||||||||| ||||| || | ||||||| || ATTAAATCCA TCGACTAAAG AAATGTCCCA GAAATCTAGG TTGCTAAACT GGTCCAAGGC 180 ATATTCAGCT AGGGTGTTTG GGGGTTTGCC CCACCCGGTA CAGTGTAGGA CCCCACCACA 41365 || || || |||||||||| | |||||||| |||||||||| || || | || |||||||||| GTACTCGGCC AGGGTGTTTG GTGGTTTGCC CCACCCGGTA CATTGCAAGA CCCCACCACA 240 ATCACCAGTT TGGCATGAAC CTCTACCAGC ACCATTAAAA TTGCAATTAG TACGACCCCA 41425 ||||||||| || ||||||| |||||||||| ||||| ||| |||||||| | |||||||||| ATCACCAGTC TGACATGAAC CTCTACCAGC ACCATCAAAG TTGCAATTCG TACGACCCCA 300 TATACGTGCC ATCTTAGTGC CCCTCGGCGC ATTGATGACC CATGTTTGGC CTCGATCGAG 41485 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| ||||||| || TATACGTGCC ATCTTAGTGC CCCTCGGTGC ATTGATGACC CATGTTTGGC CTCGATCAAG 360 ACGTCGACCA CCGCCTATCG GGGTCGATGC TGCCCAAACG GTGTAGGGAC AATTGTTGCG 41545 |||||||||| |||||||| | ||||||| || ||||| ||| ||||| |||| | |||||||| ACGTCGACCA CCGCCTATTG GGGTCGACGC CGCCCAGACG GTGTATGGAC AGTTGTTGCG 420 TACCTCGATA GTGGCAGCAT AAGTGTAAGT CACTAAAGCA AGGAAGAAGA AAATAAAAGA 41605 |||||||| | |||||||||| |||||||||| ||| |||||| || | ||||| ||| |||||| TACCTCGAAA GTGGCAGCAT AAGTGTAAGT CACAAAAGCA AGAAGGAAGA AAACAAAAGA 480 AGATGTCAAG TAGCCCATGT TTGTGTACAT ATT 41638 |||| ||||| ||| |||||| ||||| | | ||| AGATCTCAAG TAGGCCATGT TTGTGGAACT ATT 513 hqPGS_C08HBa0235H18.1+_SGN-E207077- (41127 41638) ******************************************************************************** EST sequence 511 -strand 474 n (File: SGN-E250954-) 1 TTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA 61 ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG GCAAAAGTCA TTGGAATATT 121 AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG CTAAACTGGT CCAAGGCGTA 181 CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC TGTAAGACTC CACCACAATC 241 ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG CAACCAGTAC GACCCCATAT 301 ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG 361 TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG TATGGACAGT TGTTGCGTAC 421 CTCAATAGTG CGATAGTAAG TATAAGTCAC ACAAAGAAGG AAGAAGAGAA CAAA Predicted gene structure (within gDNA segment 37954 to 43066): Exon 1 41130 41602 ( 473 n); cDNA 2 474 ( 473 n); score: 0.873 MATCH C08HBa0235H18.1+ SGN-E250954- 0.873 473 0.998 C PGS_C08HBa0235H18.1+_SGN-E250954- (41130 41602) Alignment (genomic DNA sequence = upper lines): TTACATCCTC CGGGTACCCT AAGTGGACTA GGGCATTCAC CGTTTATATT AGCCGTGCAA 41189 |||||||||| | |||||| | ||| | | | || ||||||| | |||||||| ||||||||| TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT GGCCGTGCAA 61 TGAATTGCAT GGCATTTTCC TCCACTAGGA TTGGTTGGGG CGAAAGTCAT CGGTATATTA 41249 |||||||| | | |||||||| ||||||||| || ||||||| | |||||||| || |||||| TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT TGGAATATTA 121 AATCCGTCAA CCAAAGAAAT GTCCCAGAAA TCTAGGTTGC TGAATTGGTC CAAAGCATAT 41309 ||||| || | | |||||||| |||||| ||| |||| ||||| | || ||||| ||| || || AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGCGTAC 181 TCAGCTAGGG TGTTTGGGGG TTTGCCCCAC CCGGTACAGT GTAGGACCCC ACCACAATCA 41369 || ||||||| |||||||||| ||||||||| |||||||| | ||| ||| || |||||||||| TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC ACCACAATCA 241 CCAGTTTGGC ATGAACCTCT ACCAGCACCA TTAAAATTGC AATTAGTACG ACCCCATATA 41429 ||||| || | ||| |||||| || ||| || ||||| |||| || |||||| |||||||||| CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG ACCCCATATA 301 CGTGCCATCT TAGTGCCCCT CGGCGCATTG ATGACCCATG TTTGGCCTCG ATCGAGACGT 41489 |||||||||| |||| ||||| ||| |||||| |||||||||| |||||||||| || ||||||| CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG TTTGGCCTCG ATTGAGACGT 361 CGACCACCGC CTATCGGGGT CGATGCTGCC CAAACGGTGT AGGGACAATT GTTGCGTACC 41549 |||||||||| ||||||| || |||||| ||| |||||||||| | ||||| || |||||||||| CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT ATGGACAGTT GTTGCGTACC 421 TCGATAGTGG CAGCATAAGT GTAAGTCACT AAAGCAAGGA AGAAGAAAAT AAA 41602 || |||||| | ||||| |||||||| || ||||| |||||| || ||| TCAATAGTGC GATAGTAAGT ATAAGTCACA CAAAGAAGGA AGAAGAGAAC AAA 474 hqPGS_C08HBa0235H18.1+_SGN-E250954- (41130 41602) ******************************************************************************** EST sequence 568 -strand 391 n (File: SGN-E201143-) 1 TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC 61 CTCCACTAGG TTTTGTTGGG GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA 121 TGTCCCAAAA ATCTAAGTTG CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG 181 GTTTGCCCCA TCCGGTACAC TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC 241 TGCCTGCAGC ATTAAAGTTG CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC 301 TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG 361 TCGATGCCGC CCAAGCGGTG TATGGACAGT T Predicted gene structure (within gDNA segment 38154 to 42436): Exon 1 41149 41539 ( 391 n); cDNA 1 391 ( 391 n); score: 0.882 MATCH C08HBa0235H18.1+ SGN-E201143- 0.882 391 1.000 C PGS_C08HBa0235H18.1+_SGN-E201143- (41149 41539) Alignment (genomic DNA sequence = upper lines): TAAGTGGACT AGGGCATTCA CCGTTTATAT TAGCCGTGCA ATGAATTGCA TGGCATTTTC 41208 |||| | | ||| |||||| || ||||||| | |||||||| ||||||||| || ||||||| TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC 60 CTCCACTAGG ATTGGTTGGG GCGAAAGTCA TCGGTATATT AAATCCGTCA ACCAAAGAAA 41268 |||||||||| || |||||| || ||||||| | || ||||| |||||| || || ||||||| CTCCACTAGG TTTTGTTGGG GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA 120 TGTCCCAGAA ATCTAGGTTG CTGAATTGGT CCAAAGCATA TTCAGCTAGG GTGTTTGGGG 41328 ||||||| || ||||| |||| || || |||| |||| || || || |||||| |||||||||| TGTCCCAAAA ATCTAAGTTG CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG 180 GTTTGCCCCA CCCGGTACAG TGTAGGACCC CACCACAATC ACCAGTTTGG CATGAACCTC 41388 |||||||||| |||||||| |||| ||| | |||||||||| |||||| || |||| ||||| GTTTGCCCCA TCCGGTACAC TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC 240 TACCAGCACC ATTAAAATTG CAATTAGTAC GACCCCATAT ACGTGCCATC TTAGTGCCCC 41448 | || ||| | |||||| ||| ||| ||||| |||||||||| |||||||||| ||||| |||| TGCCTGCAGC ATTAAAGTTG CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC 300 TCGGCGCATT GATGACCCAT GTTTGGCCTC GATCGAGACG TCGACCACCG CCTATCGGGG 41508 |||| ||||| |||||||||| |||||||||| ||| |||||| |||||||||| |||||||| | TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG 360 TCGATGCTGC CCAAACGGTG TAGGGACAAT T 41539 ||||||| || |||| ||||| || ||||| | | TCGATGCCGC CCAAGCGGTG TATGGACAGT T 391 hqPGS_C08HBa0235H18.1+_SGN-E201143- (41149 41539) ******************************************************************************** EST sequence 735 -strand 491 n (File: SGN-E205046-) 1 AAGTGAACCA GGACATTCAC CATTTATATT AGCCGTACAA TGAATTGCAT GGCATTTCCC 61 TCCACTAGGA TTGGTCGGGG CGAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT 121 GTCCCAGAAA TCTAGGTTGC TAAACTGGTC CAAGGCGTAC TCGGCCAGGG TGTTTGGTGG 181 TTTGCCCCAC CCGGTACATT GCAAGACCCC ACCACAATCA CCAGTCTGAC ATGAACCTCT 241 ACCAGCACCA TCAAAGTTGC AATTCGTACG ACCCCATATA CGTGCCATCT TAGTGCCCCT 301 CGGTGCATTG ATGACCCATG TTTGGCCTCG ATCAAGACGT CGACCACCGC CTATTGGGGT 361 CGACGCCGCC CAGACGGTGT ATGGACAGTT GTTGCGTACC TCGAAAGTGG CAGCATAAGT 421 GTAAGTCACA AAAGCAAGAA GGAAGAAAAC AACAGAAGAT CTCAAGTAGG CCATGTTTGT 481 GGAACTATTT T Predicted gene structure (within gDNA segment 40207 to 42798): Exon 1 41150 41640 ( 491 n); cDNA 1 491 ( 491 n); score: 0.904 MATCH C08HBa0235H18.1+ SGN-E205046- 0.904 491 1.000 C PGS_C08HBa0235H18.1+_SGN-E205046- (41150 41640) Alignment (genomic DNA sequence = upper lines): AAGTGGACTA GGGCATTCAC CGTTTATATT AGCCGTGCAA TGAATTGCAT GGCATTTTCC 41209 ||||| || | || ||||||| | |||||||| |||||| ||| |||||||||| ||||||| || AAGTGAACCA GGACATTCAC CATTTATATT AGCCGTACAA TGAATTGCAT GGCATTTCCC 60 TCCACTAGGA TTGGTTGGGG CGAAAGTCAT CGGTATATTA AATCCGTCAA CCAAAGAAAT 41269 |||||||||| ||||| |||| |||||||||| || |||||| ||||| || | | |||||||| TCCACTAGGA TTGGTCGGGG CGAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT 120 GTCCCAGAAA TCTAGGTTGC TGAATTGGTC CAAAGCATAT TCAGCTAGGG TGTTTGGGGG 41329 |||||||||| |||||||||| | || ||||| ||| || || || || |||| ||||||| || GTCCCAGAAA TCTAGGTTGC TAAACTGGTC CAAGGCGTAC TCGGCCAGGG TGTTTGGTGG 180 TTTGCCCCAC CCGGTACAGT GTAGGACCCC ACCACAATCA CCAGTTTGGC ATGAACCTCT 41389 |||||||||| |||||||| | | | |||||| |||||||||| ||||| || | |||||||||| TTTGCCCCAC CCGGTACATT GCAAGACCCC ACCACAATCA CCAGTCTGAC ATGAACCTCT 240 ACCAGCACCA TTAAAATTGC AATTAGTACG ACCCCATATA CGTGCCATCT TAGTGCCCCT 41449 |||||||||| | ||| |||| |||| ||||| |||||||||| |||||||||| |||||||||| ACCAGCACCA TCAAAGTTGC AATTCGTACG ACCCCATATA CGTGCCATCT TAGTGCCCCT 300 CGGCGCATTG ATGACCCATG TTTGGCCTCG ATCGAGACGT CGACCACCGC CTATCGGGGT 41509 ||| |||||| |||||||||| |||||||||| ||| |||||| |||||||||| |||| ||||| CGGTGCATTG ATGACCCATG TTTGGCCTCG ATCAAGACGT CGACCACCGC CTATTGGGGT 360 CGATGCTGCC CAAACGGTGT AGGGACAATT GTTGCGTACC TCGATAGTGG CAGCATAAGT 41569 ||| || ||| || ||||||| | ||||| || |||||||||| |||| ||||| |||||||||| CGACGCCGCC CAGACGGTGT ATGGACAGTT GTTGCGTACC TCGAAAGTGG CAGCATAAGT 420 GTAAGTCACT AAAGCAAGGA AGAAGAAAAT AAAAGAAGAT GTCAAGTAGC CCATGTTTGT 41629 ||||||||| |||||||| | |||||||| || ||||||| |||||||| |||||||||| GTAAGTCACA AAAGCAAGAA GGAAGAAAAC AACAGAAGAT CTCAAGTAGG CCATGTTTGT 480 GTACATATTT T 41640 | | ||||| | GGAACTATTT T 491 hqPGS_C08HBa0235H18.1+_SGN-E205046- (41150 41640) ******************************************************************************** EST sequence 820 -strand 477 n (File: SGN-E202164-) 1 AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 61 CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 121 TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT 181 TTGCCCCATC CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG 241 CCTGCAGCAT TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC 301 GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC 361 GATGCCGCCC AAACGGTGTA TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA 421 TAAGTCACAC AAAGAAGGAA GAAGAGAACA AAAGAAGATG TCAAGTAGCC CATGTTT Predicted gene structure (within gDNA segment 38174 to 43316): Exon 1 41151 41627 ( 477 n); cDNA 1 477 ( 477 n); score: 0.889 MATCH C08HBa0235H18.1+ SGN-E202164- 0.889 477 1.000 C PGS_C08HBa0235H18.1+_SGN-E202164- (41151 41627) Alignment (genomic DNA sequence = upper lines): AGTGGACTAG GGCATTCACC GTTTATATTA GCCGTGCAAT GAATTGCATG GCATTTTCCT 41210 || | | || | |||||||| |||||||| |||||||||| ||||||| || ||||||||| AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 60 CCACTAGGAT TGGTTGGGGC GAAAGTCATC GGTATATTAA ATCCGTCAAC CAAAGAAATG 41270 |||||||| | | |||||||| |||||||| || ||||||| |||| || || ||||||||| CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 120 TCCCAGAAAT CTAGGTTGCT GAATTGGTCC AAAGCATATT CAGCTAGGGT GTTTGGGGGT 41330 ||||| |||| ||| |||||| || |||||| || || || | | |||||||| |||||||||| TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT 180 TTGCCCCACC CGGTACAGTG TAGGACCCCA CCACAATCAC CAGTTTGGCA TGAACCTCTA 41390 |||||||| | ||||||| || || ||| ||| |||||||||| |||| || || || |||||| TTGCCCCATC CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG 240 CCAGCACCAT TAAAATTGCA ATTAGTACGA CCCCATATAC GTGCCATCTT AGTGCCCCTC 41450 || ||| ||| |||| ||||| | ||||||| |||||||||| |||||||||| ||| |||||| CCTGCAGCAT TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC 300 GGCGCATTGA TGACCCATGT TTGGCCTCGA TCGAGACGTC GACCACCGCC TATCGGGGTC 41510 || ||||||| |||||||||| |||||||||| | |||||||| |||||||||| |||||| ||| GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC 360 GATGCTGCCC AAACGGTGTA GGGACAATTG TTGCGTACCT CGATAGTGGC AGCATAAGTG 41570 ||||| |||| |||||||||| ||||| ||| |||||||||| | |||||||| ||||||||| GATGCCGCCC AAACGGTGTA TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA 420 TAAGTCACTA AAGCAAGGAA GAAGAAAATA AAAGAAGATG TCAAGTAGCC CATGTTT 41627 |||||||| || |||||| ||||| || | |||||||||| |||||||||| ||||||| TAAGTCACAC AAAGAAGGAA GAAGAGAACA AAAGAAGATG TCAAGTAGCC CATGTTT 477 hqPGS_C08HBa0235H18.1+_SGN-E202164- (41151 41627) ******************************************************************************** EST sequence 609 -strand 463 n (File: SGN-E264072-) 1 AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 61 CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 121 TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT 181 TTGCCCCATC CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG 241 CCTGCAGCAT TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC 301 GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC 361 GATGCCGCCC AAACGGTGTA TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA 421 TAAGTCACAC AAAGAAGGAA GAAGAGAACA AAAGAAGATG TCA Predicted gene structure (within gDNA segment 38174 to 43176): Exon 1 41151 41613 ( 463 n); cDNA 1 463 ( 463 n); score: 0.886 MATCH C08HBa0235H18.1+ SGN-E264072- 0.886 463 1.000 C PGS_C08HBa0235H18.1+_SGN-E264072- (41151 41613) Alignment (genomic DNA sequence = upper lines): AGTGGACTAG GGCATTCACC GTTTATATTA GCCGTGCAAT GAATTGCATG GCATTTTCCT 41210 || | | || | |||||||| |||||||| |||||||||| ||||||| || ||||||||| AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 60 CCACTAGGAT TGGTTGGGGC GAAAGTCATC GGTATATTAA ATCCGTCAAC CAAAGAAATG 41270 |||||||| | | |||||||| |||||||| || ||||||| |||| || || ||||||||| CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 120 TCCCAGAAAT CTAGGTTGCT GAATTGGTCC AAAGCATATT CAGCTAGGGT GTTTGGGGGT 41330 ||||| |||| ||| |||||| || |||||| || || || | | |||||||| |||||||||| TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT 180 TTGCCCCACC CGGTACAGTG TAGGACCCCA CCACAATCAC CAGTTTGGCA TGAACCTCTA 41390 |||||||| | ||||||| || || ||| ||| |||||||||| |||| || || || |||||| TTGCCCCATC CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG 240 CCAGCACCAT TAAAATTGCA ATTAGTACGA CCCCATATAC GTGCCATCTT AGTGCCCCTC 41450 || ||| ||| |||| ||||| | ||||||| |||||||||| |||||||||| ||| |||||| CCTGCAGCAT TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC 300 GGCGCATTGA TGACCCATGT TTGGCCTCGA TCGAGACGTC GACCACCGCC TATCGGGGTC 41510 || ||||||| |||||||||| |||||||||| | |||||||| |||||||||| |||||| ||| GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC 360 GATGCTGCCC AAACGGTGTA GGGACAATTG TTGCGTACCT CGATAGTGGC AGCATAAGTG 41570 ||||| |||| |||||||||| ||||| ||| |||||||||| | |||||||| ||||||||| GATGCCGCCC AAACGGTGTA TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA 420 TAAGTCACTA AAGCAAGGAA GAAGAAAATA AAAGAAGATG TCA 41613 |||||||| || |||||| ||||| || | |||||||||| ||| TAAGTCACAC AAAGAAGGAA GAAGAGAACA AAAGAAGATG TCA 463 hqPGS_C08HBa0235H18.1+_SGN-E264072- (41151 41613) ******************************************************************************** EST sequence 550 -strand 477 n (File: SGN-E202521-) 1 GACATTCACC ATTTATATTA GCCGTACAAT GAATTGCATG GCATTTCCCT CCACTAGGAT 61 TGGTCGGGGC GAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAGAAAT 121 CTAGGTTGCT AAACTGGTCC AAGGCGTACT CGGCCAGGGT GTTTGGTGGT TTGCCCCACC 181 CGGTACATTG CAAGACCCCA CCACAATCAC CAGTCTGACA TGAACCTCTA CCAGCACCAT 241 CAAAGTTGCA ATTCGTACGA CCCCATATAC GTGCCATCTT AGTGCCCCTC GGTGCATTGA 301 TGACCCATGT TTGGCCTCGA TCAAGACGTC GACCACCGCC TATTGGGGTC GACGCCGCCC 361 AGACGGTGTA TGGACAGTTG TTGCGTACCT CGAAAGTGGC AGCATAAGTG TAAGTCACAA 421 AAGCAAGAAG GAAGAAAACA AAAGAAGATC TCAAGTAGGC CATGTTTGTG GAACTAT Predicted gene structure (within gDNA segment 40317 to 42768): Exon 1 41163 41637 ( 475 n); cDNA 3 477 ( 475 n); score: 0.909 MATCH C08HBa0235H18.1+ SGN-E202521- 0.909 475 0.996 C PGS_C08HBa0235H18.1+_SGN-E202521- (41163 41637) Alignment (genomic DNA sequence = upper lines): CATTCACCGT TTATATTAGC CGTGCAATGA ATTGCATGGC ATTTTCCTCC ACTAGGATTG 41222 |||||||| | |||||||||| ||| |||||| |||||||||| |||| ||||| |||||||||| CATTCACCAT TTATATTAGC CGTACAATGA ATTGCATGGC ATTTCCCTCC ACTAGGATTG 62 GTTGGGGCGA AAGTCATCGG TATATTAAAT CCGTCAACCA AAGAAATGTC CCAGAAATCT 41282 || ||||||| ||||||| || ||||||||| || || || | |||||||||| |||||||||| GTCGGGGCGA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAGAAATCT 122 AGGTTGCTGA ATTGGTCCAA AGCATATTCA GCTAGGGTGT TTGGGGGTTT GCCCCACCCG 41342 |||||||| | | |||||||| || || || || ||||||| |||| ||||| |||||||||| AGGTTGCTAA ACTGGTCCAA GGCGTACTCG GCCAGGGTGT TTGGTGGTTT GCCCCACCCG 182 GTACAGTGTA GGACCCCACC ACAATCACCA GTTTGGCATG AACCTCTACC AGCACCATTA 41402 ||||| || | ||||||||| |||||||||| || || |||| |||||||||| |||||||| | GTACATTGCA AGACCCCACC ACAATCACCA GTCTGACATG AACCTCTACC AGCACCATCA 242 AAATTGCAAT TAGTACGACC CCATATACGT GCCATCTTAG TGCCCCTCGG CGCATTGATG 41462 || ||||||| | |||||||| |||||||||| |||||||||| |||||||||| ||||||||| AAGTTGCAAT TCGTACGACC CCATATACGT GCCATCTTAG TGCCCCTCGG TGCATTGATG 302 ACCCATGTTT GGCCTCGATC GAGACGTCGA CCACCGCCTA TCGGGGTCGA TGCTGCCCAA 41522 |||||||||| |||||||||| ||||||||| |||||||||| | |||||||| || ||||| ACCCATGTTT GGCCTCGATC AAGACGTCGA CCACCGCCTA TTGGGGTCGA CGCCGCCCAG 362 ACGGTGTAGG GACAATTGTT GCGTACCTCG ATAGTGGCAG CATAAGTGTA AGTCACTAAA 41582 |||||||| | |||| ||||| |||||||||| | |||||||| |||||||||| |||||| ||| ACGGTGTATG GACAGTTGTT GCGTACCTCG AAAGTGGCAG CATAAGTGTA AGTCACAAAA 422 GCAAGGAAGA AGAAAATAAA AGAAGATGTC AAGTAGCCCA TGTTTGTGTA CATAT 41637 ||||| | || |||||| ||| ||||||| || |||||| ||| |||||||| | ||| GCAAGAAGGA AGAAAACAAA AGAAGATCTC AAGTAGGCCA TGTTTGTGGA ACTAT 477 hqPGS_C08HBa0235H18.1+_SGN-E202521- (41163 41637) ******************************************************************************** EST sequence 837 -strand 447 n (File: SGN-E203940-) 1 ACATTCACCA TTTATATTGA CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT 61 TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC 121 TAAGTTGCTA AACTGGTCCA AGGTGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC 181 GGTACACTGT AAGACTCCAC CGCAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 241 AAAGTTGCAT CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT 301 GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA 361 AACGGTGTAT GGACAGTTGT TGCGTACTTC AATAGTGGCA GCATAAGTAT AAGTCACACA 421 AACAAGGAAG AAGAGAGCAA AAGAAGA Predicted gene structure (within gDNA segment 38284 to 43126): Exon 1 41163 41608 ( 446 n); cDNA 2 447 ( 446 n); score: 0.881 MATCH C08HBa0235H18.1+ SGN-E203940- 0.881 446 0.998 C PGS_C08HBa0235H18.1+_SGN-E203940- (41163 41608) Alignment (genomic DNA sequence = upper lines): CATTCACCGT TTATATTAGC CGTGCAATGA ATTGCATGGC ATTTTCCTCC ACTAGGATTG 41222 |||||||| | ||||||| | |||||||||| ||||| || | |||||||||| |||||| || CATTCACCAT TTATATTGAC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 61 GTTGGGGCGA AAGTCATCGG TATATTAAAT CCGTCAACCA AAGAAATGTC CCAGAAATCT 41282 |||||||| | ||||||| || ||||||||| || || || | |||||||||| ||| |||||| GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 121 AGGTTGCTGA ATTGGTCCAA AGCATATTCA GCTAGGGTGT TTGGGGGTTT GCCCCACCCG 41342 | |||||| | | |||||||| | || || |||||||||| |||||||||| |||||| ||| AAGTTGCTAA ACTGGTCCAA GGTGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 181 GTACAGTGTA GGACCCCACC ACAATCACCA GTTTGGCATG AACCTCTACC AGCACCATTA 41402 ||||| |||| ||| ||||| ||||||||| || || |||| |||||| || ||| ||||| GTACACTGTA AGACTCCACC GCAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 241 AAATTGCAAT TAGTACGACC CCATATACGT GCCATCTTAG TGCCCCTCGG CGCATTGATG 41462 || ||||| ||||||||| |||||||||| |||||||||| | |||||||| ||||||||| AAGTTGCATC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 301 ACCCATGTTT GGCCTCGATC GAGACGTCGA CCACCGCCTA TCGGGGTCGA TGCTGCCCAA 41522 |||||||||| ||||||||| |||||||||| |||||||||| |||| ||||| ||| |||||| ACCCATGTTT GGCCTCGATT GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA 361 ACGGTGTAGG GACAATTGTT GCGTACCTCG ATAGTGGCAG CATAAGTGTA AGTCACTAAA 41582 |||||||| | |||| ||||| |||||| || |||||||||| ||||||| || |||||| || ACGGTGTATG GACAGTTGTT GCGTACTTCA ATAGTGGCAG CATAAGTATA AGTCACACAA 421 GCAAGGAAGA AGAAAATAAA AGAAGA 41608 ||||||||| ||| | ||| |||||| ACAAGGAAGA AGAGAGCAAA AGAAGA 447 hqPGS_C08HBa0235H18.1+_SGN-E203940- (41163 41608) ******************************************************************************** EST sequence 1028 -strand 467 n (File: SGN-E208115-) 1 ATTTATATTA GCCGTACAAT GAATTGCATG GCATTTCCCT CCACTAGGAT TGGTCGGGGC 61 GAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAGAAAT CTAGGTTGCT 121 AAACTGGTCC AAGGCGTACT CGGCCAGGGT GTTTGGTGGT TTGCCCCACC CGGTACATTG 181 CAAGACCCCA CCACAATCAC CAGTCTGACA TGAACCTCTA CCAGCACCAT CAAAGTTGCA 241 ATTCGTACGA CCCCATATAC GTGCCATCTT AGTGCCCCTC GGTGCATTGA TGACCCATGT 301 TTGGCCTCGA TCAAGACGTC GACCACCGCC TATTGGGGTC GACGCCGCCC AGACGGTGTA 361 TGGACAGTTG TTGCGTACCT CGAAAGTGGC AGCATAAGTG TAAGTCACAA AAGCAAGAAG 421 GAAGAAAACA AAAGAAGATC TCAAGTAGGC CATGTTTGTG GAACTAT Predicted gene structure (within gDNA segment 40417 to 42768): Exon 1 41172 41637 ( 466 n); cDNA 2 467 ( 466 n); score: 0.910 MATCH C08HBa0235H18.1+ SGN-E208115- 0.910 466 0.998 C PGS_C08HBa0235H18.1+_SGN-E208115- (41172 41637) Alignment (genomic DNA sequence = upper lines): TTTATATTAG CCGTGCAATG AATTGCATGG CATTTTCCTC CACTAGGATT GGTTGGGGCG 41231 |||||||||| |||| ||||| |||||||||| ||||| |||| |||||||||| ||| |||||| TTTATATTAG CCGTACAATG AATTGCATGG CATTTCCCTC CACTAGGATT GGTCGGGGCG 61 AAAGTCATCG GTATATTAAA TCCGTCAACC AAAGAAATGT CCCAGAAATC TAGGTTGCTG 41291 |||||||| | | |||||||| ||| || || |||||||||| |||||||||| ||||||||| AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC TAGGTTGCTA 121 AATTGGTCCA AAGCATATTC AGCTAGGGTG TTTGGGGGTT TGCCCCACCC GGTACAGTGT 41351 || ||||||| | || || || || |||||| ||||| |||| |||||||||| |||||| || AACTGGTCCA AGGCGTACTC GGCCAGGGTG TTTGGTGGTT TGCCCCACCC GGTACATTGC 181 AGGACCCCAC CACAATCACC AGTTTGGCAT GAACCTCTAC CAGCACCATT AAAATTGCAA 41411 | |||||||| |||||||||| ||| || ||| |||||||||| ||||||||| ||| |||||| AAGACCCCAC CACAATCACC AGTCTGACAT GAACCTCTAC CAGCACCATC AAAGTTGCAA 241 TTAGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GCGCATTGAT GACCCATGTT 41471 || ||||||| |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| TTCGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GTGCATTGAT GACCCATGTT 301 TGGCCTCGAT CGAGACGTCG ACCACCGCCT ATCGGGGTCG ATGCTGCCCA AACGGTGTAG 41531 |||||||||| | |||||||| |||||||||| || ||||||| | || ||||| |||||||| TGGCCTCGAT CAAGACGTCG ACCACCGCCT ATTGGGGTCG ACGCCGCCCA GACGGTGTAT 361 GGACAATTGT TGCGTACCTC GATAGTGGCA GCATAAGTGT AAGTCACTAA AGCAAGGAAG 41591 ||||| |||| |||||||||| || ||||||| |||||||||| ||||||| || |||||| | | GGACAGTTGT TGCGTACCTC GAAAGTGGCA GCATAAGTGT AAGTCACAAA AGCAAGAAGG 421 AAGAAAATAA AAGAAGATGT CAAGTAGCCC ATGTTTGTGT ACATAT 41637 ||||||| || |||||||| | ||||||| || ||||||||| | ||| AAGAAAACAA AAGAAGATCT CAAGTAGGCC ATGTTTGTGG AACTAT 467 hqPGS_C08HBa0235H18.1+_SGN-E208115- (41172 41637) ******************************************************************************** EST sequence 721 -strand 457 n (File: SGN-E205100-) 1 ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 61 AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 121 AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 181 TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 241 ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 301 TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA 361 TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA 421 GAAGAGAACA AAAGAAGATG TCAAGTAGCC CATGTTT Predicted gene structure (within gDNA segment 38374 to 43316): Exon 1 41172 41627 ( 456 n); cDNA 2 457 ( 456 n); score: 0.897 MATCH C08HBa0235H18.1+ SGN-E205100- 0.897 456 0.998 C PGS_C08HBa0235H18.1+_SGN-E205100- (41172 41627) Alignment (genomic DNA sequence = upper lines): TTTATATTAG CCGTGCAATG AATTGCATGG CATTTTCCTC CACTAGGATT GGTTGGGGCG 41231 |||||||| | |||||||||| |||||| || |||||||||| ||||||| || |||||||| TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT TGTTGGGGCA 61 AAAGTCATCG GTATATTAAA TCCGTCAACC AAAGAAATGT CCCAGAAATC TAGGTTGCTG 41291 |||||||| | | |||||||| ||| || || |||||||||| |||| ||||| || |||||| AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA 121 AATTGGTCCA AAGCATATTC AGCTAGGGTG TTTGGGGGTT TGCCCCACCC GGTACAGTGT 41351 || ||||||| | || || || ||||||||| |||||||||| ||||||| || |||||| ||| AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC GGTACACTGT 181 AGGACCCCAC CACAATCACC AGTTTGGCAT GAACCTCTAC CAGCACCATT AAAATTGCAA 41411 | ||| |||| |||||||||| ||| || ||| | |||||| | | ||| |||| ||| |||||| AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT AAAGTTGCAA 241 TTAGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GCGCATTGAT GACCCATGTT 41471 |||||||| |||||||||| |||||||||| || ||||||| | |||||||| |||||||||| CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT GACCCATGTT 301 TGGCCTCGAT CGAGACGTCG ACCACCGCCT ATCGGGGTCG ATGCTGCCCA AACGGTGTAG 41531 |||||||||| ||||||||| |||||||||| ||||| |||| |||| ||||| ||||||||| TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA AACGGTGTAT 361 GGACAATTGT TGCGTACCTC GATAGTGGCA GCATAAGTGT AAGTCACTAA AGCAAGGAAG 41591 ||||| |||| |||||||||| ||||||||| |||||||| | ||||||| | | ||||||| GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAAGTAT AAGTCACACA AAGAAGGAAG 421 AAGAAAATAA AAGAAGATGT CAAGTAGCCC ATGTTT 41627 |||| || || |||||||||| |||||||||| |||||| AAGAGAACAA AAGAAGATGT CAAGTAGCCC ATGTTT 457 hqPGS_C08HBa0235H18.1+_SGN-E205100- (41172 41627) ******************************************************************************** EST sequence 707 -strand 421 n (File: SGN-E205056-) 1 CATTTATATT GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG 61 CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC 121 TAAACTGGTC CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT 181 GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC 241 AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG 301 TTTGGCCTCG ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT 361 ATGGACAGTT GTTGCGTACC TCAATAGTGG CAGCATAAGT ATAAGTCACA CAAAGAAGGA 421 A Predicted gene structure (within gDNA segment 38364 to 42946): Exon 1 41172 41590 ( 419 n); cDNA 3 421 ( 419 n); score: 0.893 MATCH C08HBa0235H18.1+ SGN-E205056- 0.893 419 0.995 C PGS_C08HBa0235H18.1+_SGN-E205056- (41172 41590) Alignment (genomic DNA sequence = upper lines): TTTATATTAG CCGTGCAATG AATTGCATGG CATTTTCCTC CACTAGGATT GGTTGGGGCG 41231 |||||||| | |||||||||| |||||| || |||||||||| ||||||| || |||||||| TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT TGTTGGGGCA 62 AAAGTCATCG GTATATTAAA TCCGTCAACC AAAGAAATGT CCCAGAAATC TAGGTTGCTG 41291 |||||||| | | |||||||| ||| || || |||||||||| |||| ||||| || |||||| AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA 122 AATTGGTCCA AAGCATATTC AGCTAGGGTG TTTGGGGGTT TGCCCCACCC GGTACAGTGT 41351 || ||||||| | || || || ||||||||| |||||||||| ||||||| || |||||| ||| AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC GGTACACTGT 182 AGGACCCCAC CACAATCACC AGTTTGGCAT GAACCTCTAC CAGCACCATT AAAATTGCAA 41411 | ||| |||| |||||||||| ||| || ||| | |||||| | | ||| |||| ||| |||||| AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT AAAGTTGCAA 242 TTAGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GCGCATTGAT GACCCATGTT 41471 |||||||| |||||||||| |||||||||| || ||||||| | |||||||| |||||||||| CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT GACCCATGTT 302 TGGCCTCGAT CGAGACGTCG ACCACCGCCT ATCGGGGTCG ATGCTGCCCA AACGGTGTAG 41531 |||||||||| ||||||||| |||||||||| ||||| |||| |||| ||||| ||||||||| TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA AACGGTGTAT 362 GGACAATTGT TGCGTACCTC GATAGTGGCA GCATAAGTGT AAGTCACTAA AGCAAGGAA 41590 ||||| |||| |||||||||| ||||||||| |||||||| | ||||||| | | |||||| GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAAGTAT AAGTCACACA AAGAAGGAA 421 hqPGS_C08HBa0235H18.1+_SGN-E205056- (41172 41590) ******************************************************************************** EST sequence 957 -strand 389 n (File: SGN-E207079-) 1 CATTTATATT GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG 61 CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC 121 TAAACTGGTC CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT 181 GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC 241 AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG 301 TTTGGCCTCG ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT 361 ATGGACAGTT GTTGCGTACC TCAATAGTG Predicted gene structure (within gDNA segment 38364 to 42626): Exon 1 41172 41558 ( 387 n); cDNA 3 389 ( 387 n); score: 0.897 MATCH C08HBa0235H18.1+ SGN-E207079- 0.897 387 0.995 C PGS_C08HBa0235H18.1+_SGN-E207079- (41172 41558) Alignment (genomic DNA sequence = upper lines): TTTATATTAG CCGTGCAATG AATTGCATGG CATTTTCCTC CACTAGGATT GGTTGGGGCG 41231 |||||||| | |||||||||| |||||| || |||||||||| ||||||| || |||||||| TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT TGTTGGGGCA 62 AAAGTCATCG GTATATTAAA TCCGTCAACC AAAGAAATGT CCCAGAAATC TAGGTTGCTG 41291 |||||||| | | |||||||| ||| || || |||||||||| |||| ||||| || |||||| AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA 122 AATTGGTCCA AAGCATATTC AGCTAGGGTG TTTGGGGGTT TGCCCCACCC GGTACAGTGT 41351 || ||||||| | || || || ||||||||| |||||||||| ||||||| || |||||| ||| AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC GGTACACTGT 182 AGGACCCCAC CACAATCACC AGTTTGGCAT GAACCTCTAC CAGCACCATT AAAATTGCAA 41411 | ||| |||| |||||||||| ||| || ||| | |||||| | | ||| |||| ||| |||||| AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT AAAGTTGCAA 242 TTAGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GCGCATTGAT GACCCATGTT 41471 |||||||| |||||||||| |||||||||| || ||||||| | |||||||| |||||||||| CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT GACCCATGTT 302 TGGCCTCGAT CGAGACGTCG ACCACCGCCT ATCGGGGTCG ATGCTGCCCA AACGGTGTAG 41531 |||||||||| ||||||||| |||||||||| ||||| |||| |||| ||||| ||||||||| TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA AACGGTGTAT 362 GGACAATTGT TGCGTACCTC GATAGTG 41558 ||||| |||| |||||||||| |||||| GGACAGTTGT TGCGTACCTC AATAGTG 389 hqPGS_C08HBa0235H18.1+_SGN-E207079- (41172 41558) ******************************************************************************** EST sequence 1076 -strand 444 n (File: SGN-E208277-) 1 GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 61 ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 121 GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 181 CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 241 CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 301 AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG 361 CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA 421 GAAGATGTCA AGTAGCCCAT GTTT Predicted gene structure (within gDNA segment 38504 to 43316): Exon 1 41184 41627 ( 444 n); cDNA 1 444 ( 444 n); score: 0.896 MATCH C08HBa0235H18.1+ SGN-E208277- 0.896 444 1.000 C PGS_C08HBa0235H18.1+_SGN-E208277- (41184 41627) Alignment (genomic DNA sequence = upper lines): GTGCAATGAA TTGCATGGCA TTTTCCTCCA CTAGGATTGG TTGGGGCGAA AGTCATCGGT 41243 |||||||||| |||| || || |||||||||| ||||| || | ||||||| || |||||| || GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 60 ATATTAAATC CGTCAACCAA AGAAATGTCC CAGAAATCTA GGTTGCTGAA TTGGTCCAAA 41303 |||||||||| | || || || |||||||||| || ||||||| |||||| || |||||||| ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 120 GCATATTCAG CTAGGGTGTT TGGGGGTTTG CCCCACCCGG TACAGTGTAG GACCCCACCA 41363 || || || | |||||||||| |||||||||| ||||| |||| |||| |||| ||| |||||| GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 180 CAATCACCAG TTTGGCATGA ACCTCTACCA GCACCATTAA AATTGCAATT AGTACGACCC 41423 |||||||||| | || |||| |||||| || ||| |||||| | |||||| |||||||||| CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 240 CATATACGTG CCATCTTAGT GCCCCTCGGC GCATTGATGA CCCATGTTTG GCCTCGATCG 41483 |||||||||| |||||||||| |||||||| |||||||||| |||||||||| |||||||| | CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 300 AGACGTCGAC CACCGCCTAT CGGGGTCGAT GCTGCCCAAA CGGTGTAGGG ACAATTGTTG 41543 |||||||||| |||||||||| ||| |||||| || ||||||| ||||||| || ||| |||||| AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG 360 CGTACCTCGA TAGTGGCAGC ATAAGTGTAA GTCACTAAAG CAAGGAAGAA GAAAATAAAA 41603 |||||||| | |||||||||| |||||| ||| ||||| || ||||||||| || || |||| CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA 420 GAAGATGTCA AGTAGCCCAT GTTT 41627 |||||||||| |||||||||| |||| GAAGATGTCA AGTAGCCCAT GTTT 444 hqPGS_C08HBa0235H18.1+_SGN-E208277- (41184 41627) ******************************************************************************** EST sequence 1024 -strand 425 n (File: SGN-E276456-) 1 GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 61 ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 121 GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 181 CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 241 CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 301 AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG 361 CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA 421 GAAGA Predicted gene structure (within gDNA segment 38504 to 43126): Exon 1 41184 41608 ( 425 n); cDNA 1 425 ( 425 n); score: 0.892 MATCH C08HBa0235H18.1+ SGN-E276456- 0.892 425 1.000 C PGS_C08HBa0235H18.1+_SGN-E276456- (41184 41608) Alignment (genomic DNA sequence = upper lines): GTGCAATGAA TTGCATGGCA TTTTCCTCCA CTAGGATTGG TTGGGGCGAA AGTCATCGGT 41243 |||||||||| |||| || || |||||||||| ||||| || | ||||||| || |||||| || GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 60 ATATTAAATC CGTCAACCAA AGAAATGTCC CAGAAATCTA GGTTGCTGAA TTGGTCCAAA 41303 |||||||||| | || || || |||||||||| || ||||||| |||||| || |||||||| ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 120 GCATATTCAG CTAGGGTGTT TGGGGGTTTG CCCCACCCGG TACAGTGTAG GACCCCACCA 41363 || || || | |||||||||| |||||||||| ||||| |||| |||| |||| ||| |||||| GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 180 CAATCACCAG TTTGGCATGA ACCTCTACCA GCACCATTAA AATTGCAATT AGTACGACCC 41423 |||||||||| | || |||| |||||| || ||| |||||| | |||||| |||||||||| CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 240 CATATACGTG CCATCTTAGT GCCCCTCGGC GCATTGATGA CCCATGTTTG GCCTCGATCG 41483 |||||||||| |||||||||| |||||||| |||||||||| |||||||||| |||||||| | CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 300 AGACGTCGAC CACCGCCTAT CGGGGTCGAT GCTGCCCAAA CGGTGTAGGG ACAATTGTTG 41543 |||||||||| |||||||||| ||| |||||| || ||||||| ||||||| || ||| |||||| AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG 360 CGTACCTCGA TAGTGGCAGC ATAAGTGTAA GTCACTAAAG CAAGGAAGAA GAAAATAAAA 41603 |||||||| | |||||||||| |||||| ||| ||||| || ||||||||| || || |||| CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA 420 GAAGA 41608 ||||| GAAGA 425 hqPGS_C08HBa0235H18.1+_SGN-E276456- (41184 41608) ******************************************************************************** EST sequence 1232 -strand 445 n (File: SGN-E200871-) 1 TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 61 TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 121 CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 181 AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 241 ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 301 GACGTCGACC ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC 361 GTACCTCAAT AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG 421 AAGATGTCAA GTAGCCCATG TTTGT Predicted gene structure (within gDNA segment 38514 to 42229): Exon 1 41185 41629 ( 445 n); cDNA 1 445 ( 445 n); score: 0.897 MATCH C08HBa0235H18.1+ SGN-E200871- 0.897 445 1.000 C PGS_C08HBa0235H18.1+_SGN-E200871- (41185 41629) Alignment (genomic DNA sequence = upper lines): TGCAATGAAT TGCATGGCAT TTTCCTCCAC TAGGATTGGT TGGGGCGAAA GTCATCGGTA 41244 |||||||||| ||| || ||| |||||||||| |||| || || |||||| ||| ||||| || | TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 60 TATTAAATCC GTCAACCAAA GAAATGTCCC AGAAATCTAG GTTGCTGAAT TGGTCCAAAG 41304 |||||||||| || || ||| |||||||||| | ||||||| |||||| || |||||||| | TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 120 CATATTCAGC TAGGGTGTTT GGGGGTTTGC CCCACCCGGT ACAGTGTAGG ACCCCACCAC 41364 | || || || |||||||||| |||||||||| |||| ||||| ||| |||| | || ||||||| CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 180 AATCACCAGT TTGGCATGAA CCTCTACCAG CACCATTAAA ATTGCAATTA GTACGACCCC 41424 |||||||||| || |||| | ||||| || | || ||||||| |||||| | |||||||||| AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 240 ATATACGTGC CATCTTAGTG CCCCTCGGCG CATTGATGAC CCATGTTTGG CCTCGATCGA 41484 |||||||||| ||||||||| |||||||| | |||||||||| |||||||||| ||||||| || ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 300 GACGTCGACC ACCGCCTATC GGGGTCGATG CTGCCCAAAC GGTGTAGGGA CAATTGTTGC 41544 |||||||||| |||||||||| || ||||||| | |||||||| |||||| ||| || ||||||| GACGTCGACC ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC 360 GTACCTCGAT AGTGGCAGCA TAAGTGTAAG TCACTAAAGC AAGGAAGAAG AAAATAAAAG 41604 ||||||| || |||||||||| ||||| |||| |||| || |||||||||| | || ||||| GTACCTCAAT AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG 420 AAGATGTCAA GTAGCCCATG TTTGT 41629 |||||||||| |||||||||| ||||| AAGATGTCAA GTAGCCCATG TTTGT 445 hqPGS_C08HBa0235H18.1+_SGN-E200871- (41185 41629) ******************************************************************************** EST sequence 868 -strand 433 n (File: SGN-E200039-) 1 TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 61 TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 121 CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 181 AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 241 ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 301 GACGTCGACC ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC 361 GTACCTCAAT AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG 421 AAGATGTCAA GTA Predicted gene structure (within gDNA segment 38514 to 43216): Exon 1 41185 41617 ( 433 n); cDNA 1 433 ( 433 n); score: 0.894 MATCH C08HBa0235H18.1+ SGN-E200039- 0.894 433 1.000 C PGS_C08HBa0235H18.1+_SGN-E200039- (41185 41617) Alignment (genomic DNA sequence = upper lines): TGCAATGAAT TGCATGGCAT TTTCCTCCAC TAGGATTGGT TGGGGCGAAA GTCATCGGTA 41244 |||||||||| ||| || ||| |||||||||| |||| || || |||||| ||| ||||| || | TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 60 TATTAAATCC GTCAACCAAA GAAATGTCCC AGAAATCTAG GTTGCTGAAT TGGTCCAAAG 41304 |||||||||| || || ||| |||||||||| | ||||||| |||||| || |||||||| | TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 120 CATATTCAGC TAGGGTGTTT GGGGGTTTGC CCCACCCGGT ACAGTGTAGG ACCCCACCAC 41364 | || || || |||||||||| |||||||||| |||| ||||| ||| |||| | || ||||||| CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 180 AATCACCAGT TTGGCATGAA CCTCTACCAG CACCATTAAA ATTGCAATTA GTACGACCCC 41424 |||||||||| || |||| | ||||| || | || ||||||| |||||| | |||||||||| AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 240 ATATACGTGC CATCTTAGTG CCCCTCGGCG CATTGATGAC CCATGTTTGG CCTCGATCGA 41484 |||||||||| ||||||||| |||||||| | |||||||||| |||||||||| ||||||| || ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 300 GACGTCGACC ACCGCCTATC GGGGTCGATG CTGCCCAAAC GGTGTAGGGA CAATTGTTGC 41544 |||||||||| |||||||||| || ||||||| | |||||||| |||||| ||| || ||||||| GACGTCGACC ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC 360 GTACCTCGAT AGTGGCAGCA TAAGTGTAAG TCACTAAAGC AAGGAAGAAG AAAATAAAAG 41604 ||||||| || |||||||||| ||||| |||| |||| || |||||||||| | || ||||| GTACCTCAAT AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG 420 AAGATGTCAA GTA 41617 |||||||||| ||| AAGATGTCAA GTA 433 hqPGS_C08HBa0235H18.1+_SGN-E200039- (41185 41617) ******************************************************************************** EST sequence 1055 -strand 429 n (File: SGN-E210426-) 1 TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 61 TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 121 CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 181 AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 241 ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 301 GACGTCGACC ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC 361 GTACCTCAAT AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG 421 AAGATGTCA Predicted gene structure (within gDNA segment 38514 to 43176): Exon 1 41185 41613 ( 429 n); cDNA 1 429 ( 429 n); score: 0.893 MATCH C08HBa0235H18.1+ SGN-E210426- 0.893 429 1.000 C PGS_C08HBa0235H18.1+_SGN-E210426- (41185 41613) Alignment (genomic DNA sequence = upper lines): TGCAATGAAT TGCATGGCAT TTTCCTCCAC TAGGATTGGT TGGGGCGAAA GTCATCGGTA 41244 |||||||||| ||| || ||| |||||||||| |||| || || |||||| ||| ||||| || | TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 60 TATTAAATCC GTCAACCAAA GAAATGTCCC AGAAATCTAG GTTGCTGAAT TGGTCCAAAG 41304 |||||||||| || || ||| |||||||||| | ||||||| |||||| || |||||||| | TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 120 CATATTCAGC TAGGGTGTTT GGGGGTTTGC CCCACCCGGT ACAGTGTAGG ACCCCACCAC 41364 | || || || |||||||||| |||||||||| |||| ||||| ||| |||| | || ||||||| CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 180 AATCACCAGT TTGGCATGAA CCTCTACCAG CACCATTAAA ATTGCAATTA GTACGACCCC 41424 |||||||||| || |||| | ||||| || | || ||||||| |||||| | |||||||||| AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 240 ATATACGTGC CATCTTAGTG CCCCTCGGCG CATTGATGAC CCATGTTTGG CCTCGATCGA 41484 |||||||||| ||||||||| |||||||| | |||||||||| |||||||||| ||||||| || ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 300 GACGTCGACC ACCGCCTATC GGGGTCGATG CTGCCCAAAC GGTGTAGGGA CAATTGTTGC 41544 |||||||||| |||||||||| || ||||||| | |||||||| |||||| ||| || ||||||| GACGTCGACC ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC 360 GTACCTCGAT AGTGGCAGCA TAAGTGTAAG TCACTAAAGC AAGGAAGAAG AAAATAAAAG 41604 ||||||| || |||||||||| ||||| |||| |||| || |||||||||| | || ||||| GTACCTCAAT AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG 420 AAGATGTCA 41613 ||||||||| AAGATGTCA 429 hqPGS_C08HBa0235H18.1+_SGN-E210426- (41185 41613) ******************************************************************************** EST sequence 639 -strand 419 n (File: SGN-E338892-) 1 TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 61 TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 121 CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 181 AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 241 ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 301 GACGTCGACC ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC 361 GTACCTCAAT AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAA Predicted gene structure (within gDNA segment 38514 to 43076): Exon 1 41185 41603 ( 419 n); cDNA 1 419 ( 419 n); score: 0.890 MATCH C08HBa0235H18.1+ SGN-E338892- 0.890 419 1.000 C PGS_C08HBa0235H18.1+_SGN-E338892- (41185 41603) Alignment (genomic DNA sequence = upper lines): TGCAATGAAT TGCATGGCAT TTTCCTCCAC TAGGATTGGT TGGGGCGAAA GTCATCGGTA 41244 |||||||||| ||| || ||| |||||||||| |||| || || |||||| ||| ||||| || | TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 60 TATTAAATCC GTCAACCAAA GAAATGTCCC AGAAATCTAG GTTGCTGAAT TGGTCCAAAG 41304 |||||||||| || || ||| |||||||||| | ||||||| |||||| || |||||||| | TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 120 CATATTCAGC TAGGGTGTTT GGGGGTTTGC CCCACCCGGT ACAGTGTAGG ACCCCACCAC 41364 | || || || |||||||||| |||||||||| |||| ||||| ||| |||| | || ||||||| CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 180 AATCACCAGT TTGGCATGAA CCTCTACCAG CACCATTAAA ATTGCAATTA GTACGACCCC 41424 |||||||||| || |||| | ||||| || | || ||||||| |||||| | |||||||||| AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 240 ATATACGTGC CATCTTAGTG CCCCTCGGCG CATTGATGAC CCATGTTTGG CCTCGATCGA 41484 |||||||||| ||||||||| |||||||| | |||||||||| |||||||||| ||||||| || ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 300 GACGTCGACC ACCGCCTATC GGGGTCGATG CTGCCCAAAC GGTGTAGGGA CAATTGTTGC 41544 |||||||||| |||||||||| || ||||||| | |||||||| |||||| ||| || ||||||| GACGTCGACC ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC 360 GTACCTCGAT AGTGGCAGCA TAAGTGTAAG TCACTAAAGC AAGGAAGAAG AAAATAAAA 41603 ||||||| || |||||||||| ||||| |||| |||| || |||||||||| | || |||| GTACCTCAAT AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAA 419 hqPGS_C08HBa0235H18.1+_SGN-E338892- (41185 41603) ******************************************************************************** EST sequence 912 -strand 426 n (File: SGN-E256174-) 1 AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT 61 TAAATCCATC GACTAAAGAA ATGTCCCAAA AATATAAGTT GCTAAACTGG TCCAAGGCGT 121 ACTCGGCTAG GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT 181 CACCAGTCTG ACATGTACCT CTGCATGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA 241 TACGTGCCAT CTTAGTTCCC CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC 301 GTCGACCACC GCCTATCGGA GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA 361 CCTCAATAGT GGCAGCATAA GTATAAGTCA CACAAAGAAG GAAGAAGAGA ACAAAAGAAG 421 ATGTCA Predicted gene structure (within gDNA segment 38544 to 43176): Exon 1 41188 41613 ( 426 n); cDNA 1 426 ( 426 n); score: 0.887 MATCH C08HBa0235H18.1+ SGN-E256174- 0.887 426 1.000 C PGS_C08HBa0235H18.1+_SGN-E256174- (41188 41613) Alignment (genomic DNA sequence = upper lines): AATGAATTGC ATGGCATTTT CCTCCACTAG GATTGGTTGG GGCGAAAGTC ATCGGTATAT 41247 |||||||||| || |||||| |||||||||| | || ||||| ||| |||||| || || |||| AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT 60 TAAATCCGTC AACCAAAGAA ATGTCCCAGA AATCTAGGTT GCTGAATTGG TCCAAAGCAT 41307 ||||||| || || |||||| |||||||| | ||| || ||| ||| || ||| ||||| || | TAAATCCATC GACTAAAGAA ATGTCCCAAA AATATAAGTT GCTAAACTGG TCCAAGGCGT 120 ATTCAGCTAG GGTGTTTGGG GGTTTGCCCC ACCCGGTACA GTGTAGGACC CCACCACAAT 41367 | || ||||| |||||||||| |||||||||| | |||||||| |||| ||| |||||||||| ACTCGGCTAG GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT 180 CACCAGTTTG GCATGAACCT CTACCAGCAC CATTAAAATT GCAATTAGTA CGACCCCATA 41427 ||||||| || |||| |||| || | ||| ||||||| || |||| |||| |||||||||| CACCAGTCTG ACATGTACCT CTGCATGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA 240 TACGTGCCAT CTTAGTGCCC CTCGGCGCAT TGATGACCCA TGTTTGGCCT CGATCGAGAC 41487 |||||||||| |||||| ||| ||||| |||| |||||||||| |||||||||| |||| ||||| TACGTGCCAT CTTAGTTCCC CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC 300 GTCGACCACC GCCTATCGGG GTCGATGCTG CCCAAACGGT GTAGGGACAA TTGTTGCGTA 41547 |||||||||| ||||||||| |||||||| | |||||||||| ||| ||||| |||||||||| GTCGACCACC GCCTATCGGA GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA 360 CCTCGATAGT GGCAGCATAA GTGTAAGTCA CTAAAGCAAG GAAGAAGAAA ATAAAAGAAG 41607 |||| ||||| |||||||||| || ||||||| | || ||| |||||||| | | |||||||| CCTCAATAGT GGCAGCATAA GTATAAGTCA CACAAAGAAG GAAGAAGAGA ACAAAAGAAG 420 ATGTCA 41613 |||||| ATGTCA 426 hqPGS_C08HBa0235H18.1+_SGN-E256174- (41188 41613) ******************************************************************************** EST sequence 1168 -strand 410 n (File: SGN-E208827-) 1 AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT 61 TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT 121 ACTCGGCTAG GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT 181 CACCAGTCTG ACATGTACCT CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA 241 TACGTGCCAT CTTAGTTCCC CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC 301 GTCGACCACC GCCTATCGGA GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA 361 CCTCAATAGT GGCAGCATAA GTATAAGTCA CACAAAGAAG GAAGAAGAGA Predicted gene structure (within gDNA segment 38544 to 43016): Exon 1 41188 41595 ( 408 n); cDNA 1 408 ( 408 n); score: 0.892 MATCH C08HBa0235H18.1+ SGN-E208827- 0.892 408 0.995 C PGS_C08HBa0235H18.1+_SGN-E208827- (41188 41595) Alignment (genomic DNA sequence = upper lines): AATGAATTGC ATGGCATTTT CCTCCACTAG GATTGGTTGG GGCGAAAGTC ATCGGTATAT 41247 |||||||||| || |||||| |||||||||| | || ||||| ||| |||||| || || |||| AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT 60 TAAATCCGTC AACCAAAGAA ATGTCCCAGA AATCTAGGTT GCTGAATTGG TCCAAAGCAT 41307 ||||||| || || |||||| |||||||| | |||||| ||| ||| || ||| ||||| || | TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT 120 ATTCAGCTAG GGTGTTTGGG GGTTTGCCCC ACCCGGTACA GTGTAGGACC CCACCACAAT 41367 | || ||||| |||||||||| |||||||||| | |||||||| |||| ||| |||||||||| ACTCGGCTAG GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT 180 CACCAGTTTG GCATGAACCT CTACCAGCAC CATTAAAATT GCAATTAGTA CGACCCCATA 41427 ||||||| || |||| |||| || || ||| ||||||| || |||| |||| |||||||||| CACCAGTCTG ACATGTACCT CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA 240 TACGTGCCAT CTTAGTGCCC CTCGGCGCAT TGATGACCCA TGTTTGGCCT CGATCGAGAC 41487 |||||||||| |||||| ||| ||||| |||| |||||||||| |||||||||| |||| ||||| TACGTGCCAT CTTAGTTCCC CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC 300 GTCGACCACC GCCTATCGGG GTCGATGCTG CCCAAACGGT GTAGGGACAA TTGTTGCGTA 41547 |||||||||| ||||||||| |||||||| | |||||||||| ||| ||||| |||||||||| GTCGACCACC GCCTATCGGA GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA 360 CCTCGATAGT GGCAGCATAA GTGTAAGTCA CTAAAGCAAG GAAGAAGA 41595 |||| ||||| |||||||||| || ||||||| | || ||| |||||||| CCTCAATAGT GGCAGCATAA GTATAAGTCA CACAAAGAAG GAAGAAGA 408 hqPGS_C08HBa0235H18.1+_SGN-E208827- (41188 41595) ******************************************************************************** EST sequence 990 -strand 431 n (File: SGN-E207769-) 1 CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT 61 CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA 121 GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTGT 181 GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA 241 TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC 301 CGCCTATCGG AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG 361 TGGCAGCATA AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT 421 AGCCCATGTT T Predicted gene structure (within gDNA segment 38634 to 43316): Exon 1 41199 41627 ( 429 n); cDNA 3 431 ( 429 n); score: 0.895 MATCH C08HBa0235H18.1+ SGN-E207769- 0.895 429 0.995 C PGS_C08HBa0235H18.1+_SGN-E207769- (41199 41627) Alignment (genomic DNA sequence = upper lines): TGGCATTTTC CTCCACTAGG ATTGGTTGGG GCGAAAGTCA TCGGTATATT AAATCCGTCA 41258 || ||||||| |||||||||| || |||||| || ||||||| | || ||||| |||||| || TGACATTTTC CTCCACTAGG TTTTGTTGGG GCAAAAGTCA TTGGAATATT AAATCCATCG 62 ACCAAAGAAA TGTCCCAGAA ATCTAGGTTG CTGAATTGGT CCAAAGCATA TTCAGCTAGG 41318 || ||||||| ||||||| || ||||| |||| || || |||| |||| || || || |||||| ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG CTAAACTGGT CCAAGGCGTA CTCGGCTAGG 122 GTGTTTGGGG GTTTGCCCCA CCCGGTACAG TGTAGGACCC CACCACAATC ACCAGTTTGG 41378 |||||||||| |||||||||| |||||||| |||| ||| | |||||||||| |||||| || GTGTTTGGGG GTTTGCCCCA TCCGGTACAC TGTAAGACTC CACCACAATC ACCAGTGTGA 182 CATGAACCTC TACCAGCACC ATTAAAATTG CAATTAGTAC GACCCCATAT ACGTGCCATC 41438 |||| ||||| | || ||| | |||||| ||| ||| ||||| |||||||||| |||||||||| CATGTACCTC TGCCTGCAGC ATTAAAGTTG CAACCAGTAC GACCCCATAT ACGTGCCATC 242 TTAGTGCCCC TCGGCGCATT GATGACCCAT GTTTGGCCTC GATCGAGACG TCGACCACCG 41498 ||||| |||| |||| ||||| |||||||||| |||||||||| ||| |||||| |||||||||| TTAGTTCCCC TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG TCGACCACCG 302 CCTATCGGGG TCGATGCTGC CCAAACGGTG TAGGGACAAT TGTTGCGTAC CTCGATAGTG 41558 |||||||| | ||||||| || |||||||||| || ||||| | |||||||||| ||| |||||| CCTATCGGAG TCGATGCCGC CCAAACGGTG TATGGACAGT TGTTGCGTAC CTCAATAGTG 362 GCAGCATAAG TGTAAGTCAC TAAAGCAAGG AAGAAGAAAA TAAAAGAAGA TGTCAAGTAG 41618 |||||||||| | |||||||| || |||| ||||||| || ||||||||| |||||||||| GCAGCATAAG TATAAGTCAC ACAAAGAAGG AAGAAGAGAA CAAAAGAAGA TGTCAAGTAG 422 CCCATGTTT 41627 ||||||||| CCCATGTTT 431 hqPGS_C08HBa0235H18.1+_SGN-E207769- (41199 41627) ******************************************************************************** EST sequence 1151 -strand 418 n (File: SGN-E201442-) 1 CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT 61 CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA 121 GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT 181 GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA 241 TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC 301 CGCCTATCGG AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG 361 TGGCAGCATA AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAA Predicted gene structure (within gDNA segment 38634 to 43186): Exon 1 41199 41614 ( 416 n); cDNA 3 418 ( 416 n); score: 0.892 MATCH C08HBa0235H18.1+ SGN-E201442- 0.892 416 0.995 C PGS_C08HBa0235H18.1+_SGN-E201442- (41199 41614) Alignment (genomic DNA sequence = upper lines): TGGCATTTTC CTCCACTAGG ATTGGTTGGG GCGAAAGTCA TCGGTATATT AAATCCGTCA 41258 || ||||||| |||||||||| || |||||| || ||||||| | || ||||| |||||| || TGACATTTTC CTCCACTAGG TTTTGTTGGG GCAAAAGTCA TTGGAATATT AAATCCATCG 62 ACCAAAGAAA TGTCCCAGAA ATCTAGGTTG CTGAATTGGT CCAAAGCATA TTCAGCTAGG 41318 || ||||||| ||||||| || ||||| |||| || || |||| |||| || || || |||||| ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG CTAAACTGGT CCAAGGCGTA CTCGGCTAGG 122 GTGTTTGGGG GTTTGCCCCA CCCGGTACAG TGTAGGACCC CACCACAATC ACCAGTTTGG 41378 |||||||||| |||||||||| |||||||| |||| ||| | |||||||||| |||||| || GTGTTTGGGG GTTTGCCCCA TCCGGTACAC TGTAAGACTC CACCACAATC ACCAGTCTGA 182 CATGAACCTC TACCAGCACC ATTAAAATTG CAATTAGTAC GACCCCATAT ACGTGCCATC 41438 |||| ||||| | || ||| | |||||| ||| ||| ||||| |||||||||| |||||||||| CATGTACCTC TGCCTGCAGC ATTAAAGTTG CAACCAGTAC GACCCCATAT ACGTGCCATC 242 TTAGTGCCCC TCGGCGCATT GATGACCCAT GTTTGGCCTC GATCGAGACG TCGACCACCG 41498 ||||| |||| |||| ||||| |||||||||| |||||||||| ||| |||||| |||||||||| TTAGTTCCCC TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG TCGACCACCG 302 CCTATCGGGG TCGATGCTGC CCAAACGGTG TAGGGACAAT TGTTGCGTAC CTCGATAGTG 41558 |||||||| | ||||||| || |||||||||| || ||||| | |||||||||| ||| |||||| CCTATCGGAG TCGATGCCGC CCAAACGGTG TATGGACAGT TGTTGCGTAC CTCAATAGTG 362 GCAGCATAAG TGTAAGTCAC TAAAGCAAGG AAGAAGAAAA TAAAAGAAGA TGTCAA 41614 |||||||||| | |||||||| || |||| ||||||| || ||||||||| |||||| GCAGCATAAG TATAAGTCAC ACAAAGAAGG AAGAAGAGAA CAAAAGAAGA TGTCAA 418 hqPGS_C08HBa0235H18.1+_SGN-E201442- (41199 41614) ******************************************************************************** EST sequence 824 -strand 413 n (File: SGN-E336913-) 1 GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC 61 GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG 121 GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG 181 ACATGTACCT CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT 241 CTTAGTTCCC CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC 301 GCCTATCGGA GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT 361 GGCAGCATAA GTATAAGTCA CACAAAGAAG GAAGAAGAGA ACAAAAGAAG CCT Predicted gene structure (within gDNA segment 38644 to 43146): Exon 1 41199 41607 ( 409 n); cDNA 2 410 ( 409 n); score: 0.890 MATCH C08HBa0235H18.1+ SGN-E336913- 0.890 409 0.990 C PGS_C08HBa0235H18.1+_SGN-E336913- (41199 41607) Alignment (genomic DNA sequence = upper lines): TGGCATTTTC CTCCACTAGG ATTGGTTGGG GCGAAAGTCA TCGGTATATT AAATCCGTCA 41258 || ||||||| |||||||||| || |||||| || ||||||| | || ||||| |||||| || TGACATTTTC CTCCACTAGG TTTTGTTGGG GCAAAAGTCA TTGGAATATT AAATCCATCG 61 ACCAAAGAAA TGTCCCAGAA ATCTAGGTTG CTGAATTGGT CCAAAGCATA TTCAGCTAGG 41318 || ||||||| ||||||| || ||||| |||| || || |||| |||| || || || |||||| ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG CTAAACTGGT CCAAGGCGTA CTCGGCTAGG 121 GTGTTTGGGG GTTTGCCCCA CCCGGTACAG TGTAGGACCC CACCACAATC ACCAGTTTGG 41378 |||||||||| |||||||||| |||||||| |||| ||| | |||||||||| |||||| || GTGTTTGGGG GTTTGCCCCA TCCGGTACAC TGTAAGACTC CACCACAATC ACCAGTCTGA 181 CATGAACCTC TACCAGCACC ATTAAAATTG CAATTAGTAC GACCCCATAT ACGTGCCATC 41438 |||| ||||| | || ||| | |||||| ||| ||| ||||| |||||||||| |||||||||| CATGTACCTC TGCCTGCAGC ATTAAAGTTG CAACCAGTAC GACCCCATAT ACGTGCCATC 241 TTAGTGCCCC TCGGCGCATT GATGACCCAT GTTTGGCCTC GATCGAGACG TCGACCACCG 41498 ||||| |||| |||| ||||| |||||||||| |||||||||| ||| |||||| |||||||||| TTAGTTCCCC TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG TCGACCACCG 301 CCTATCGGGG TCGATGCTGC CCAAACGGTG TAGGGACAAT TGTTGCGTAC CTCGATAGTG 41558 |||||||| | ||||||| || |||||||||| || ||||| | |||||||||| ||| |||||| CCTATCGGAG TCGATGCCGC CCAAACGGTG TATGGACAGT TGTTGCGTAC CTCAATAGTG 361 GCAGCATAAG TGTAAGTCAC TAAAGCAAGG AAGAAGAAAA TAAAAGAAG 41607 |||||||||| | |||||||| || |||| ||||||| || |||||||| GCAGCATAAG TATAAGTCAC ACAAAGAAGG AAGAAGAGAA CAAAAGAAG 410 hqPGS_C08HBa0235H18.1+_SGN-E336913- (41199 41607) ******************************************************************************** EST sequence 888 -strand 335 n (File: SGN-E200631-) 1 AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA 61 AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC 121 CCATCCGGTA CACTGTAAGA CTCCACCCAA TCACCAGTCT GACATGTACC TCTGCCTGCA 181 GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TTTAGTTCCC CTCGGAGCAT 241 TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCCCG CCTATCGAGT GATGCCGCCC 301 AACGGTGTAT GGACAGTTGT TGGTACTCAA TAGTG Predicted gene structure (within gDNA segment 38834 to 42791): Exon 1 41216 41558 ( 343 n); cDNA 1 335 ( 335 n); score: 0.869 MATCH C08HBa0235H18.1+ SGN-E200631- 0.869 343 1.024 C PGS_C08HBa0235H18.1+_SGN-E200631- (41216 41558) Alignment (genomic DNA sequence = upper lines): AGGATTGGTT GGGGCGAAAG TCATCGGTAT ATTAAATCCG TCAACCAAAG AAATGTCCCA 41275 ||| || ||| ||||| |||| |||| || || ||||||||| || || |||| |||||||||| AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA 60 GAAATCTAGG TTGCTGAATT GGTCCAAAGC ATATTCAGCT AGGGTGTTTG GGGGTTTGCC 41335 ||||||| | ||||| || | ||||||| || || || ||| |||||||||| |||||||||| AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC 120 CCACCCGGTA CAGTGTAGGA CCCCACCACA ATCACCAGTT TGGCATGAAC CTCTACCAGC 41395 ||| |||||| || |||| || | ||||| || ||||||||| || |||| || |||| || || CCATCCGGTA CACTGTAAGA CTCCACC-CA ATCACCAGTC TGACATGTAC CTCTGCCTGC 179 ACCATTAAAA TTGCAATTAG TACGACCCCA TATACGTGCC ATCTTAGTGC CCCTCGGCGC 41455 | ||||||| |||||| || |||||||||| |||||||||| || ||||| | ||||||| || AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC AT-TTAGTTC CCCTCGGAGC 238 ATTGATGACC CATGTTTGGC CTCGATCGAG ACGTCGACCA CCGCCTATCG GGGTCGATGC 41515 |||||||||| |||||||||| |||||| ||| ||||||||| ||||||||| | || ||||| ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACC- CCGCCTATC- GAGT-GATGC 295 TGCCCAAACG GTGTAGGGAC AATTGTTGCG TACCTCGATA GTG 41558 |||| |||| ||||| |||| | |||||| | || ||| ||| ||| CGCCC-AACG GTGTATGGAC AGTTGTTG-G TA-CTCAATA GTG 335 hqPGS_C08HBa0235H18.1+_SGN-E200631- (41216 41558) ******************************************************************************** EST sequence 711 -strand 395 n (File: SGN-E204939-) 1 TTTGTTGGGG CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA 61 TCTAAGTTGC TAAACTGGTC CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT 121 CCGGTACACT GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA 181 TTAAAGTTGC AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG 241 ATGACCCATG TTTGGCCTCG ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC 301 CAAACGGTGT ATGGACAGTT GTTGCGTACC TCAATAGTGG CAGCATAAGT ATAAGTCACA 361 CAAAGAAGGA AGAAGAGAAC AAAAGAAGAT GTCAA Predicted gene structure (within gDNA segment 38864 to 43186): Exon 1 41220 41614 ( 395 n); cDNA 1 395 ( 395 n); score: 0.891 MATCH C08HBa0235H18.1+ SGN-E204939- 0.891 395 1.000 C PGS_C08HBa0235H18.1+_SGN-E204939- (41220 41614) Alignment (genomic DNA sequence = upper lines): TTGGTTGGGG CGAAAGTCAT CGGTATATTA AATCCGTCAA CCAAAGAAAT GTCCCAGAAA 41279 || ||||||| | |||||||| || |||||| ||||| || | | |||||||| |||||| ||| TTTGTTGGGG CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA 60 TCTAGGTTGC TGAATTGGTC CAAAGCATAT TCAGCTAGGG TGTTTGGGGG TTTGCCCCAC 41339 |||| ||||| | || ||||| ||| || || || ||||||| |||||||||| ||||||||| TCTAAGTTGC TAAACTGGTC CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT 120 CCGGTACAGT GTAGGACCCC ACCACAATCA CCAGTTTGGC ATGAACCTCT ACCAGCACCA 41399 |||||||| | ||| ||| || |||||||||| ||||| || | ||| |||||| || ||| || CCGGTACACT GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA 180 TTAAAATTGC AATTAGTACG ACCCCATATA CGTGCCATCT TAGTGCCCCT CGGCGCATTG 41459 ||||| |||| || |||||| |||||||||| |||||||||| |||| ||||| ||| |||||| TTAAAGTTGC AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG 240 ATGACCCATG TTTGGCCTCG ATCGAGACGT CGACCACCGC CTATCGGGGT CGATGCTGCC 41519 |||||||||| |||||||||| || ||||||| |||||||||| ||||||| || |||||| ||| ATGACCCATG TTTGGCCTCG ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC 300 CAAACGGTGT AGGGACAATT GTTGCGTACC TCGATAGTGG CAGCATAAGT GTAAGTCACT 41579 |||||||||| | ||||| || |||||||||| || ||||||| |||||||||| |||||||| CAAACGGTGT ATGGACAGTT GTTGCGTACC TCAATAGTGG CAGCATAAGT ATAAGTCACA 360 AAAGCAAGGA AGAAGAAAAT AAAAGAAGAT GTCAA 41614 || ||||| |||||| || |||||||||| ||||| CAAAGAAGGA AGAAGAGAAC AAAAGAAGAT GTCAA 395 hqPGS_C08HBa0235H18.1+_SGN-E204939- (41220 41614) ******************************************************************************** EST sequence 1139 -strand 390 n (File: SGN-E210135-) 1 TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT 61 ATAAGTTGCT AAGCTGGTCC AAGGCGTACT CGGTTAGGGT GTTTGGGGGT TTGCCCCATC 121 CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT 181 TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA 241 TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC 301 AAACGGTGTA TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC 361 AAAGAAGGAA GAAGAGAACA AAAGAAGATG Predicted gene structure (within gDNA segment 38874 to 43146): Exon 1 41223 41610 ( 388 n); cDNA 3 390 ( 388 n); score: 0.884 MATCH C08HBa0235H18.1+ SGN-E210135- 0.884 388 0.995 C PGS_C08HBa0235H18.1+_SGN-E210135- (41223 41610) Alignment (genomic DNA sequence = upper lines): GTTGGGGCGA AAGTCATCGG TATATTAAAT CCGTCAACCA AAGAAATGTC CCAGAAATCT 41282 |||||||| | ||||||| || ||||||||| || || || | |||||||||| ||| |||| | GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATAT 62 AGGTTGCTGA ATTGGTCCAA AGCATATTCA GCTAGGGTGT TTGGGGGTTT GCCCCACCCG 41342 | |||||| | |||||||| || || || | |||||||| |||||||||| |||||| ||| AAGTTGCTAA GCTGGTCCAA GGCGTACTCG GTTAGGGTGT TTGGGGGTTT GCCCCATCCG 122 GTACAGTGTA GGACCCCACC ACAATCACCA GTTTGGCATG AACCTCTACC AGCACCATTA 41402 ||||| |||| ||| ||||| |||||||||| || || |||| |||||| || ||| ||||| GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 182 AAATTGCAAT TAGTACGACC CCATATACGT GCCATCTTAG TGCCCCTCGG CGCATTGATG 41462 || |||||| ||||||||| |||||||||| |||||||||| | |||||||| ||||||||| AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 242 ACCCATGTTT GGCCTCGATC GAGACGTCGA CCACCGCCTA TCGGGGTCGA TGCTGCCCAA 41522 |||||||||| ||||||||| |||||||||| |||||||||| |||| ||||| ||| |||||| ACCCATGTTT GGCCTCGATT GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA 302 ACGGTGTAGG GACAATTGTT GCGTACCTCG ATAGTGGCAG CATAAGTGTA AGTCACTAAA 41582 |||||||| | |||| ||||| ||||||||| |||||||||| ||||||| || |||||| || ACGGTGTATG GACAGTTGTT GCGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACACAA 362 GCAAGGAAGA AGAAAATAAA AGAAGATG 41610 |||||||| ||| || ||| |||||||| AGAAGGAAGA AGAGAACAAA AGAAGATG 390 hqPGS_C08HBa0235H18.1+_SGN-E210135- (41223 41610) ******************************************************************************** EST sequence 743 -strand 349 n (File: SGN-E278209-) 1 CGGGGCGAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC AGAAATCTAG 61 GTTGCTAAAC TGGTCCAAGG CGTACTCGGC CAGGGTGTTT GGTGGTTTGC CCCACCCGGT 121 ACATTGCAAG ACCCCCCCCA CAATCACCAG TCTGACATGA ACCTCTACCA GCACCATCAA 181 AGTTGCAATT CGTACGACCC CATATACGTG CCATCTTAGT GCCCCTCGGT GCATTGATGA 241 CCCATGTTTG GCCTCGATCA AGACGTCGAC CACCGCCTAT TGGGGTCGAC GCCGCCCAGA 301 CGGTGTATGG ACAGTTGTTG CGTACCTCGA AAGTGGCAGC ATAAGTGTA Predicted gene structure (within gDNA segment 39219 to 42172): Exon 1 41226 41572 ( 347 n); cDNA 2 349 ( 348 n); score: 0.903 MATCH C08HBa0235H18.1+ SGN-E278209- 0.903 347 0.994 C PGS_C08HBa0235H18.1+_SGN-E278209- (41226 41572) Alignment (genomic DNA sequence = upper lines): GGGGCGAAAG TCATCGGTAT ATTAAATCCG TCAACCAAAG AAATGTCCCA GAAATCTAGG 41285 |||||||||| |||| || || ||||||||| || || |||| |||||||||| |||||||||| GGGGCGAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA GAAATCTAGG 61 TTGCTGAATT GGTCCAAAGC ATATTCAGCT AGGGTGTTTG GGGGTTTGCC CCACCCGGTA 41345 ||||| || | ||||||| || || || || |||||||||| | |||||||| |||||||||| TTGCTAAACT GGTCCAAGGC GTACTCGGCC AGGGTGTTTG GTGGTTTGCC CCACCCGGTA 121 CAGTGTAGGA -CCCCACCAC AATCACCAGT TTGGCATGAA CCTCTACCAG CACCATTAAA 41404 || || | || |||| |||| |||||||||| || |||||| |||||||||| |||||| ||| CATTGCAAGA CCCCCCCCAC AATCACCAGT CTGACATGAA CCTCTACCAG CACCATCAAA 181 ATTGCAATTA GTACGACCCC ATATACGTGC CATCTTAGTG CCCCTCGGCG CATTGATGAC 41464 |||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| GTTGCAATTC GTACGACCCC ATATACGTGC CATCTTAGTG CCCCTCGGTG CATTGATGAC 241 CCATGTTTGG CCTCGATCGA GACGTCGACC ACCGCCTATC GGGGTCGATG CTGCCCAAAC 41524 |||||||||| |||||||| | |||||||||| ||||||||| |||||||| | | ||||| || CCATGTTTGG CCTCGATCAA GACGTCGACC ACCGCCTATT GGGGTCGACG CCGCCCAGAC 301 GGTGTAGGGA CAATTGTTGC GTACCTCGAT AGTGGCAGCA TAAGTGTA 41572 |||||| ||| || ||||||| ||||||||| |||||||||| |||||||| GGTGTATGGA CAGTTGTTGC GTACCTCGAA AGTGGCAGCA TAAGTGTA 349 hqPGS_C08HBa0235H18.1+_SGN-E278209- (41226 41572) ******************************************************************************** EST sequence 1059 -strand 265 n (File: SGN-E210564-) 1 GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC 61 TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG 121 ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA 181 GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG 241 CCTCGATTGA GACGTCGACC ACCGC Predicted gene structure (within gDNA segment 39014 to 42099): Exon 1 41235 41499 ( 265 n); cDNA 1 265 ( 265 n); score: 0.891 MATCH C08HBa0235H18.1+ SGN-E210564- 0.891 265 1.000 C PGS_C08HBa0235H18.1+_SGN-E210564- (41235 41499) Alignment (genomic DNA sequence = upper lines): GTCATCGGTA TATTAAATCC GTCAACCAAA GAAATGTCCC AGAAATCTAG GTTGCTGAAT 41294 ||||| || | |||||||||| || || ||| |||||||||| | ||||||| |||||| || GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC 60 TGGTCCAAAG CATATTCAGC TAGGGTGTTT GGGGGTTTGC CCCACCCGGT ACAGTGTAGG 41354 |||||||| | | || || || |||||||||| |||||||||| |||| ||||| ||| |||| | TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG 120 ACCCCACCAC AATCACCAGT TTGGCATGAA CCTCTACCAG CACCATTAAA ATTGCAATTA 41414 || ||||||| |||||||||| || |||| | ||||| || | || ||||||| |||||| | ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA 180 GTACGACCCC ATATACGTGC CATCTTAGTG CCCCTCGGCG CATTGATGAC CCATGTTTGG 41474 |||||||||| |||||||||| ||||||||| |||||||| | |||||||||| |||||||||| GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG 240 CCTCGATCGA GACGTCGACC ACCGC 41499 ||||||| || |||||||||| ||||| CCTCGATTGA GACGTCGACC ACCGC 265 hqPGS_C08HBa0235H18.1+_SGN-E210564- (41235 41499) ******************************************************************************** EST sequence 647 -strand 386 n (File: SGN-E338707-) 1 ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 61 GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 121 CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 181 CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 241 AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG 301 CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA 361 GAAGATGTCA AGTAGCCCTC GTGCCG Predicted gene structure (within gDNA segment 39104 to 43336): Exon 1 41244 41625 ( 382 n); cDNA 1 382 ( 382 n); score: 0.893 MATCH C08HBa0235H18.1+ SGN-E338707- 0.893 382 0.990 C PGS_C08HBa0235H18.1+_SGN-E338707- (41244 41625) Alignment (genomic DNA sequence = upper lines): ATATTAAATC CGTCAACCAA AGAAATGTCC CAGAAATCTA GGTTGCTGAA TTGGTCCAAA 41303 |||||||||| | || || || |||||||||| || ||||||| |||||| || |||||||| ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 60 GCATATTCAG CTAGGGTGTT TGGGGGTTTG CCCCACCCGG TACAGTGTAG GACCCCACCA 41363 || || || | |||||||||| |||||||||| ||||| |||| |||| |||| ||| |||||| GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 120 CAATCACCAG TTTGGCATGA ACCTCTACCA GCACCATTAA AATTGCAATT AGTACGACCC 41423 |||||||||| | || |||| |||||| || ||| |||||| | |||||| |||||||||| CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 180 CATATACGTG CCATCTTAGT GCCCCTCGGC GCATTGATGA CCCATGTTTG GCCTCGATCG 41483 |||||||||| |||||||||| |||||||| |||||||||| |||||||||| |||||||| | CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 240 AGACGTCGAC CACCGCCTAT CGGGGTCGAT GCTGCCCAAA CGGTGTAGGG ACAATTGTTG 41543 |||||||||| |||||||||| ||| |||||| || ||||||| ||||||| || ||| |||||| AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG 300 CGTACCTCGA TAGTGGCAGC ATAAGTGTAA GTCACTAAAG CAAGGAAGAA GAAAATAAAA 41603 |||||||| | |||||||||| |||||| ||| ||||| || ||||||||| || || |||| CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA 360 GAAGATGTCA AGTAGCCCAT GT 41625 |||||||||| |||||||| || GAAGATGTCA AGTAGCCCTC GT 382 hqPGS_C08HBa0235H18.1+_SGN-E338707- (41244 41625) ******************************************************************************** EST sequence 613 -strand 379 n (File: SGN-E337746-) 1 ATATTAAATC CATCGACTAA AGAAATGTCC CAGAAATCTA GGTTGCTAAA CTGGTCCAAG 61 GCGTACTCGG CAAGGGTGTT TGGTGGTTTG CCCCACCCGG TACATTGCAA GACCCCACCA 121 CAATCACCAG TATGACATGA ACCTCTACCA GCACCATCAA AGTTGCAATT CGTACGACCC 181 CATATACGTG CCATCTTAGT GCCCCTCGGT GCATTGATGA CCCATGTTTG GCCTCGATCA 241 AGACGTCGAC CACCGCCTAT TGGGGTCGAC GCCGCCCAGA CGGTGTATGG ACAGTTGTTG 301 CGTACCTCGA AAGTGGCAGC ATAAGTGTAA GTCACAAAAG CAAGAAGGAA GAAAACAAAA 361 GAAGATCTCA AGTAGGCCA Predicted gene structure (within gDNA segment 39878 to 42618): Exon 1 41244 41622 ( 379 n); cDNA 1 379 ( 379 n); score: 0.910 MATCH C08HBa0235H18.1+ SGN-E337746- 0.910 379 1.000 C PGS_C08HBa0235H18.1+_SGN-E337746- (41244 41622) Alignment (genomic DNA sequence = upper lines): ATATTAAATC CGTCAACCAA AGAAATGTCC CAGAAATCTA GGTTGCTGAA TTGGTCCAAA 41303 |||||||||| | || || || |||||||||| |||||||||| ||||||| || |||||||| ATATTAAATC CATCGACTAA AGAAATGTCC CAGAAATCTA GGTTGCTAAA CTGGTCCAAG 60 GCATATTCAG CTAGGGTGTT TGGGGGTTTG CCCCACCCGG TACAGTGTAG GACCCCACCA 41363 || || || | | |||||||| ||| |||||| |||||||||| |||| || | |||||||||| GCGTACTCGG CAAGGGTGTT TGGTGGTTTG CCCCACCCGG TACATTGCAA GACCCCACCA 120 CAATCACCAG TTTGGCATGA ACCTCTACCA GCACCATTAA AATTGCAATT AGTACGACCC 41423 |||||||||| | || ||||| |||||||||| ||||||| || | |||||||| ||||||||| CAATCACCAG TATGACATGA ACCTCTACCA GCACCATCAA AGTTGCAATT CGTACGACCC 180 CATATACGTG CCATCTTAGT GCCCCTCGGC GCATTGATGA CCCATGTTTG GCCTCGATCG 41483 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| ||||||||| CATATACGTG CCATCTTAGT GCCCCTCGGT GCATTGATGA CCCATGTTTG GCCTCGATCA 240 AGACGTCGAC CACCGCCTAT CGGGGTCGAT GCTGCCCAAA CGGTGTAGGG ACAATTGTTG 41543 |||||||||| |||||||||| |||||||| || ||||| | ||||||| || ||| |||||| AGACGTCGAC CACCGCCTAT TGGGGTCGAC GCCGCCCAGA CGGTGTATGG ACAGTTGTTG 300 CGTACCTCGA TAGTGGCAGC ATAAGTGTAA GTCACTAAAG CAAGGAAGAA GAAAATAAAA 41603 |||||||||| ||||||||| |||||||||| ||||| |||| |||| | ||| ||||| |||| CGTACCTCGA AAGTGGCAGC ATAAGTGTAA GTCACAAAAG CAAGAAGGAA GAAAACAAAA 360 GAAGATGTCA AGTAGCCCA 41622 |||||| ||| ||||| ||| GAAGATCTCA AGTAGGCCA 379 hqPGS_C08HBa0235H18.1+_SGN-E337746- (41244 41622) ******************************************************************************** EST sequence 813 -strand 358 n (File: SGN-E336810-) 1 ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC 61 GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA 121 ATCACCAGTC TGACATGTAC CTCTGCTTGC AGCATTAAAG TTGCAACCAG TACGACCCCA 181 TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG 241 ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG 301 TACCTCAATA GTGGCAGCAT AAGTATAAGT CACCCAAAGA AGGAAGAAGA GAACAAAA Predicted gene structure (within gDNA segment 39124 to 43076): Exon 1 41246 41603 ( 358 n); cDNA 1 358 ( 358 n); score: 0.888 MATCH C08HBa0235H18.1+ SGN-E336810- 0.888 358 1.000 C PGS_C08HBa0235H18.1+_SGN-E336810- (41246 41603) Alignment (genomic DNA sequence = upper lines): ATTAAATCCG TCAACCAAAG AAATGTCCCA GAAATCTAGG TTGCTGAATT GGTCCAAAGC 41305 ||||||||| || || |||| |||||||||| ||||||| | ||||| || | ||||||| || ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC 60 ATATTCAGCT AGGGTGTTTG GGGGTTTGCC CCACCCGGTA CAGTGTAGGA CCCCACCACA 41365 || || ||| |||||||||| |||||||||| ||| |||||| || |||| || | |||||||| GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA 120 ATCACCAGTT TGGCATGAAC CTCTACCAGC ACCATTAAAA TTGCAATTAG TACGACCCCA 41425 ||||||||| || |||| || |||| | || | ||||||| |||||| || |||||||||| ATCACCAGTC TGACATGTAC CTCTGCTTGC AGCATTAAAG TTGCAACCAG TACGACCCCA 180 TATACGTGCC ATCTTAGTGC CCCTCGGCGC ATTGATGACC CATGTTTGGC CTCGATCGAG 41485 |||||||||| |||||||| | ||||||| || |||||||||| |||||||||| |||||| ||| TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG 240 ACGTCGACCA CCGCCTATCG GGGTCGATGC TGCCCAAACG GTGTAGGGAC AATTGTTGCG 41545 |||||||||| |||||||||| | |||||||| ||||||||| ||||| |||| | |||||||| ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG 300 TACCTCGATA GTGGCAGCAT AAGTGTAAGT CACTAAAGCA AGGAAGAAGA AAATAAAA 41603 |||||| ||| |||||||||| |||| ||||| ||| || | |||||||||| || |||| TACCTCAATA GTGGCAGCAT AAGTATAAGT CACCCAAAGA AGGAAGAAGA GAACAAAA 358 hqPGS_C08HBa0235H18.1+_SGN-E336810- (41246 41603) ******************************************************************************** EST sequence 906 -strand 362 n (File: SGN-E200826-) 1 TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA AACTGGTCCA AGGCGTACTC 61 GGCTAGGGTG TTTGGGGGTT TGCCCCATCC GGTACACTGT AAGACTCCAC CACAATCACC 121 AGTCTGACAT GTACCTCTGC CTGCAGCATT AAAGTTGCAA CCAGTACGAC CCCATATACG 181 TGCCATCTTA GTTCCCCTCG GAGCATTGAT GACCCATGTT TGGCCTCGAT TGAGACGTCG 241 ACCACCGCCT ATCGGAGTCG ATGCCGCCCA AACGGTGTAT GGACAGTTGT TGCGTACCTC 301 AATAGTGGCA GCATAAGTAT AAGTCACACA AAGAAGGAAG AAGAGAACAA AATAAGATGT 361 CA Predicted gene structure (within gDNA segment 39184 to 43176): Exon 1 41252 41613 ( 362 n); cDNA 1 362 ( 362 n); score: 0.890 MATCH C08HBa0235H18.1+ SGN-E200826- 0.890 362 1.000 C PGS_C08HBa0235H18.1+_SGN-E200826- (41252 41613) Alignment (genomic DNA sequence = upper lines): TCCGTCAACC AAAGAAATGT CCCAGAAATC TAGGTTGCTG AATTGGTCCA AAGCATATTC 41311 ||| || || |||||||||| |||| ||||| || |||||| || ||||||| | || || || TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA AACTGGTCCA AGGCGTACTC 60 AGCTAGGGTG TTTGGGGGTT TGCCCCACCC GGTACAGTGT AGGACCCCAC CACAATCACC 41371 ||||||||| |||||||||| ||||||| || |||||| ||| | ||| |||| |||||||||| GGCTAGGGTG TTTGGGGGTT TGCCCCATCC GGTACACTGT AAGACTCCAC CACAATCACC 120 AGTTTGGCAT GAACCTCTAC CAGCACCATT AAAATTGCAA TTAGTACGAC CCCATATACG 41431 ||| || ||| | |||||| | | ||| |||| ||| |||||| |||||||| |||||||||| AGTCTGACAT GTACCTCTGC CTGCAGCATT AAAGTTGCAA CCAGTACGAC CCCATATACG 180 TGCCATCTTA GTGCCCCTCG GCGCATTGAT GACCCATGTT TGGCCTCGAT CGAGACGTCG 41491 |||||||||| || ||||||| | |||||||| |||||||||| |||||||||| ||||||||| TGCCATCTTA GTTCCCCTCG GAGCATTGAT GACCCATGTT TGGCCTCGAT TGAGACGTCG 240 ACCACCGCCT ATCGGGGTCG ATGCTGCCCA AACGGTGTAG GGACAATTGT TGCGTACCTC 41551 |||||||||| ||||| |||| |||| ||||| ||||||||| ||||| |||| |||||||||| ACCACCGCCT ATCGGAGTCG ATGCCGCCCA AACGGTGTAT GGACAGTTGT TGCGTACCTC 300 GATAGTGGCA GCATAAGTGT AAGTCACTAA AGCAAGGAAG AAGAAAATAA AAGAAGATGT 41611 ||||||||| |||||||| | ||||||| | | ||||||| |||| || || || ||||||| AATAGTGGCA GCATAAGTAT AAGTCACACA AAGAAGGAAG AAGAGAACAA AATAAGATGT 360 CA 41613 || CA 362 hqPGS_C08HBa0235H18.1+_SGN-E200826- (41252 41613) ******************************************************************************** EST sequence 803 -strand 313 n (File: SGN-E205710-) 1 AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG TAAGACTCCA 61 CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA ACCAGTACGA 121 CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT TTGGCCTCGA 181 TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA TGGACAGTTG 241 TTGCGTACCT CAATAGTGGC AGCATAAGTA CAAGTCACAC AAAGAAGGAA GAAGAGAACA 301 AAAGAAGATG TCA Predicted gene structure (within gDNA segment 39674 to 43176): Exon 1 41301 41613 ( 313 n); cDNA 1 313 ( 313 n); score: 0.895 MATCH C08HBa0235H18.1+ SGN-E205710- 0.895 313 1.000 C PGS_C08HBa0235H18.1+_SGN-E205710- (41301 41613) Alignment (genomic DNA sequence = upper lines): AAAGCATATT CAGCTAGGGT GTTTGGGGGT TTGCCCCACC CGGTACAGTG TAGGACCCCA 41360 || || || | | |||||||| |||||||||| |||||||| | ||||||| || || ||| ||| AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG TAAGACTCCA 60 CCACAATCAC CAGTTTGGCA TGAACCTCTA CCAGCACCAT TAAAATTGCA ATTAGTACGA 41420 |||||||||| |||| || || || |||||| || ||| ||| |||| ||||| | ||||||| CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA ACCAGTACGA 120 CCCCATATAC GTGCCATCTT AGTGCCCCTC GGCGCATTGA TGACCCATGT TTGGCCTCGA 41480 |||||||||| |||||||||| ||| |||||| || ||||||| |||||||||| |||||||||| CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT TTGGCCTCGA 180 TCGAGACGTC GACCACCGCC TATCGGGGTC GATGCTGCCC AAACGGTGTA GGGACAATTG 41540 | |||||||| |||||||||| |||||| ||| ||||| |||| |||||||||| ||||| ||| TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA TGGACAGTTG 240 TTGCGTACCT CGATAGTGGC AGCATAAGTG TAAGTCACTA AAGCAAGGAA GAAGAAAATA 41600 |||||||||| | |||||||| ||||||||| ||||||| || |||||| ||||| || | TTGCGTACCT CAATAGTGGC AGCATAAGTA CAAGTCACAC AAAGAAGGAA GAAGAGAACA 300 AAAGAAGATG TCA 41613 |||||||||| ||| AAAGAAGATG TCA 313 hqPGS_C08HBa0235H18.1+_SGN-E205710- (41301 41613) ******************************************************************************** EST sequence 806 -strand 299 n (File: SGN-E205598-) 1 TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 61 CTGACATGTA CCTCTGCTTG CAGCATTAAA GTTGCATCCA GTCCGACCCC ATATACGTGC 121 CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 181 ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT 241 AGTGGCAGCA TAAGTCTCAG TCACACACAG AAGGAAGAAG AGAACAAAAG AAGATGTCA Predicted gene structure (within gDNA segment 39778 to 43176): Exon 1 41315 41613 ( 299 n); cDNA 1 299 ( 299 n); score: 0.890 MATCH C08HBa0235H18.1+ SGN-E205598- 0.890 299 1.000 C PGS_C08HBa0235H18.1+_SGN-E205598- (41315 41613) Alignment (genomic DNA sequence = upper lines): TAGGGTGTTT GGGGGTTTGC CCCACCCGGT ACAGTGTAGG ACCCCACCAC AATCACCAGT 41374 |||||||||| |||||||||| |||| ||||| ||| |||| | || ||||||| |||||||||| TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 60 TTGGCATGAA CCTCTACCAG CACCATTAAA ATTGCAATTA GTACGACCCC ATATACGTGC 41434 || |||| | ||||| | | || ||||||| ||||| | || ||||||| |||||||||| CTGACATGTA CCTCTGCTTG CAGCATTAAA GTTGCATCCA GTCCGACCCC ATATACGTGC 120 CATCTTAGTG CCCCTCGGCG CATTGATGAC CCATGTTTGG CCTCGATCGA GACGTCGACC 41494 ||||||||| |||||||| | |||||||||| |||||||||| ||||||| || |||||||||| CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 180 ACCGCCTATC GGGGTCGATG CTGCCCAAAC GGTGTAGGGA CAATTGTTGC GTACCTCGAT 41554 |||||||||| || ||||||| | |||||||| |||||| ||| || ||||||| ||||||| || ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT 240 AGTGGCAGCA TAAGTGTAAG TCACTAAAGC AAGGAAGAAG AAAATAAAAG AAGATGTCA 41613 |||||||||| ||||| | || |||| | |||||||||| | || ||||| ||||||||| AGTGGCAGCA TAAGTCTCAG TCACACACAG AAGGAAGAAG AGAACAAAAG AAGATGTCA 299 hqPGS_C08HBa0235H18.1+_SGN-E205598- (41315 41613) ******************************************************************************** EST sequence 1213 -strand 296 n (File: SGN-E209515-) 1 GTGTTTGGGG GTTTGCCCCA TCCGGTTCAC TGTAAGACTC CACCACAATC ACCAGTCTGA 61 CATGTACCTC TGCCTGCAGC ATTAAAGTTG CACCCAGTAC GACCCCATAT ACGTGCCATG 121 TTAGTTCCCC TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG TCGACCACCG 181 CCTATCGGAG TCGATGCCGC CCAAACGGTG TATGGACAGT TGTTGCGTAC CTCAATAGTG 241 GCAGCATAAG TATAAGTCAC ACAAAGAAGG AAGAAGAGAA CAAAAGAAGA TGTCAA Predicted gene structure (within gDNA segment 39854 to 43186): Exon 1 41319 41614 ( 296 n); cDNA 1 296 ( 296 n); score: 0.895 MATCH C08HBa0235H18.1+ SGN-E209515- 0.895 296 1.000 C PGS_C08HBa0235H18.1+_SGN-E209515- (41319 41614) Alignment (genomic DNA sequence = upper lines): GTGTTTGGGG GTTTGCCCCA CCCGGTACAG TGTAGGACCC CACCACAATC ACCAGTTTGG 41378 |||||||||| |||||||||| ||||| || |||| ||| | |||||||||| |||||| || GTGTTTGGGG GTTTGCCCCA TCCGGTTCAC TGTAAGACTC CACCACAATC ACCAGTCTGA 60 CATGAACCTC TACCAGCACC ATTAAAATTG CAATTAGTAC GACCCCATAT ACGTGCCATC 41438 |||| ||||| | || ||| | |||||| ||| || ||||| |||||||||| ||||||||| CATGTACCTC TGCCTGCAGC ATTAAAGTTG CACCCAGTAC GACCCCATAT ACGTGCCATG 120 TTAGTGCCCC TCGGCGCATT GATGACCCAT GTTTGGCCTC GATCGAGACG TCGACCACCG 41498 ||||| |||| |||| ||||| |||||||||| |||||||||| ||| |||||| |||||||||| TTAGTTCCCC TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG TCGACCACCG 180 CCTATCGGGG TCGATGCTGC CCAAACGGTG TAGGGACAAT TGTTGCGTAC CTCGATAGTG 41558 |||||||| | ||||||| || |||||||||| || ||||| | |||||||||| ||| |||||| CCTATCGGAG TCGATGCCGC CCAAACGGTG TATGGACAGT TGTTGCGTAC CTCAATAGTG 240 GCAGCATAAG TGTAAGTCAC TAAAGCAAGG AAGAAGAAAA TAAAAGAAGA TGTCAA 41614 |||||||||| | |||||||| || |||| ||||||| || ||||||||| |||||| GCAGCATAAG TATAAGTCAC ACAAAGAAGG AAGAAGAGAA CAAAAGAAGA TGTCAA 296 hqPGS_C08HBa0235H18.1+_SGN-E209515- (41319 41614) ******************************************************************************** EST sequence 1220 -strand 289 n (File: SGN-E249666-) 1 GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 61 CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 121 CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 181 GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT AGTGGCAGCA 241 TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATGTCA Predicted gene structure (within gDNA segment 39914 to 43176): Exon 1 41325 41613 ( 289 n); cDNA 1 289 ( 289 n); score: 0.903 MATCH C08HBa0235H18.1+ SGN-E249666- 0.903 289 1.000 C PGS_C08HBa0235H18.1+_SGN-E249666- (41325 41613) Alignment (genomic DNA sequence = upper lines): GGGGGTTTGC CCCACCCGGT ACAGTGTAGG ACCCCACCAC AATCACCAGT TTGGCATGAA 41384 |||||||||| |||| ||||| ||| |||| | || ||||||| |||||||||| || |||| | GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 60 CCTCTACCAG CACCATTAAA ATTGCAATTA GTACGACCCC ATATACGTGC CATCTTAGTG 41444 ||||| || | || ||||||| |||||| | |||||||||| |||||||||| ||||||||| CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 120 CCCCTCGGCG CATTGATGAC CCATGTTTGG CCTCGATCGA GACGTCGACC ACCGCCTATC 41504 |||||||| | |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 180 GGGGTCGATG CTGCCCAAAC GGTGTAGGGA CAATTGTTGC GTACCTCGAT AGTGGCAGCA 41564 || ||||||| | |||||||| |||||| ||| || ||||||| ||||||| || |||||||||| GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT AGTGGCAGCA 240 TAAGTGTAAG TCACTAAAGC AAGGAAGAAG AAAATAAAAG AAGATGTCA 41613 ||||| |||| |||| || |||||||||| | || ||||| ||||||||| TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATGTCA 289 hqPGS_C08HBa0235H18.1+_SGN-E249666- (41325 41613) ******************************************************************************** EST sequence 875 -strand 291 n (File: SGN-E390089-) 1 ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT CTGCCTGCAG 61 CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC CTCGGAGCAT 121 TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC GCCTATCGGA GTCGATGCCG 181 CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT GGCAGCATAA GTATAAGTCA 241 CACAAAGAAG GAAGAAGAGA ACAAAAGAAG ATGTCAAGTA GCCCATGTTT G Predicted gene structure (within gDNA segment 40044 to 43326): Exon 1 41340 41628 ( 289 n); cDNA 3 291 ( 289 n); score: 0.907 MATCH C08HBa0235H18.1+ SGN-E390089- 0.907 289 0.993 C PGS_C08HBa0235H18.1+_SGN-E390089- (41340 41628) Alignment (genomic DNA sequence = upper lines): CCGGTACAGT GTAGGACCCC ACCACAATCA CCAGTTTGGC ATGAACCTCT ACCAGCACCA 41399 |||||||| | ||| ||| || |||||||||| ||||| || | ||| |||||| || ||| || CCGGTACACT GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA 62 TTAAAATTGC AATTAGTACG ACCCCATATA CGTGCCATCT TAGTGCCCCT CGGCGCATTG 41459 ||||| |||| || |||||| |||||||||| |||||||||| |||| ||||| ||| |||||| TTAAAGTTGC AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG 122 ATGACCCATG TTTGGCCTCG ATCGAGACGT CGACCACCGC CTATCGGGGT CGATGCTGCC 41519 |||||||||| |||||||||| || ||||||| |||||||||| ||||||| || |||||| ||| ATGACCCATG TTTGGCCTCG ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC 182 CAAACGGTGT AGGGACAATT GTTGCGTACC TCGATAGTGG CAGCATAAGT GTAAGTCACT 41579 |||||||||| | ||||| || |||||||||| || ||||||| |||||||||| |||||||| CAAACGGTGT ATGGACAGTT GTTGCGTACC TCAATAGTGG CAGCATAAGT ATAAGTCACA 242 AAAGCAAGGA AGAAGAAAAT AAAAGAAGAT GTCAAGTAGC CCATGTTTG 41628 || ||||| |||||| || |||||||||| |||||||||| ||||||||| CAAAGAAGGA AGAAGAGAAC AAAAGAAGAT GTCAAGTAGC CCATGTTTG 291 hqPGS_C08HBa0235H18.1+_SGN-E390089- (41340 41628) ******************************************************************************** EST sequence 627 -strand 213 n (File: SGN-E335140-) 1 TGCCCCATNG NCGGGTACAC TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC 61 TGCCTGCAGC ATTAAAGTTG CAACCAGGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC 121 CTCGGAGCAT TGATGACCCA TGGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG 181 AGTCGATGCC GCCCAAACGG TTATGGACAG GTT Predicted gene structure (within gDNA segment 39935 to 42436): Exon 1 41342 41536 ( 195 n); cDNA 14 209 ( 196 n); score: 0.877 MATCH C08HBa0235H18.1+ SGN-E335140- 0.877 195 0.915 C PGS_C08HBa0235H18.1+_SGN-E335140- (41342 41536) Alignment (genomic DNA sequence = upper lines): GGTACAGTGT AGGACCCCAC CACAATCACC AGTTTGGCAT GAACCTCTAC CAGCACCATT 41401 |||||| ||| | ||| |||| |||||||||| ||| || ||| | |||||| | | ||| |||| GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 73 AAAATTGCAA TTA-GTACGA CCCCATATAC GTGCCATCTT AGTGCCCCTC GGCGCATTGA 41460 ||| |||||| | |||||| |||||||||| |||||||||| ||| |||||| || ||||||| AAAGTTGCAA CCAGGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA 133 TGACCCAT-G TTTGGCCTCG ATCGAGACGT CGACCACCGC CTATCGGGGT CGATGCTGCC 41519 |||||||| | |||||||||| || ||||||| |||||||||| ||||||| || |||||| ||| TGACCCATGG TTTGGCCTCG ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC 193 CAAACGGTGT AGGGACA 41536 |||||||| | | ||||| CAAACGGT-T ATGGACA 209 hqPGS_C08HBa0235H18.1+_SGN-E335140- (41342 41536) ******************************************************************************** EST sequence 651 -strand 255 n (File: SGN-E264435-) 1 TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 61 ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 121 TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA 181 TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA 241 GAAGAGAACA AAAGA Predicted gene structure (within gDNA segment 40174 to 43096): Exon 1 41351 41605 ( 255 n); cDNA 1 255 ( 255 n); score: 0.898 MATCH C08HBa0235H18.1+ SGN-E264435- 0.898 255 1.000 C PGS_C08HBa0235H18.1+_SGN-E264435- (41351 41605) Alignment (genomic DNA sequence = upper lines): TAGGACCCCA CCACAATCAC CAGTTTGGCA TGAACCTCTA CCAGCACCAT TAAAATTGCA 41410 || ||| ||| |||||||||| |||| || || || |||||| || ||| ||| |||| ||||| TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 60 ATTAGTACGA CCCCATATAC GTGCCATCTT AGTGCCCCTC GGCGCATTGA TGACCCATGT 41470 | ||||||| |||||||||| |||||||||| ||| |||||| || ||||||| |||||||||| ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 120 TTGGCCTCGA TCGAGACGTC GACCACCGCC TATCGGGGTC GATGCTGCCC AAACGGTGTA 41530 |||||||||| | |||||||| |||||||||| |||||| ||| ||||| |||| |||||||||| TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA 180 GGGACAATTG TTGCGTACCT CGATAGTGGC AGCATAAGTG TAAGTCACTA AAGCAAGGAA 41590 ||||| ||| |||||||||| | |||||||| ||||||||| |||||||| || |||||| TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA 240 GAAGAAAATA AAAGA 41605 ||||| || | ||||| GAAGAGAACA AAAGA 255 hqPGS_C08HBa0235H18.1+_SGN-E264435- (41351 41605) ******************************************************************************** EST sequence 756 -strand 257 n (File: SGN-E263895-) 1 CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG ACCCCATATA 61 CGTCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGACGTC 121 GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA TGGACAGTTG TTGCGTACCT 181 CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA GAAGAGAACA AAAGAAGATG 241 TCAAGTAGCC CATGTTT Predicted gene structure (within gDNA segment 40014 to 43316): Exon 1 41370 41627 ( 258 n); cDNA 1 257 ( 257 n); score: 0.903 MATCH C08HBa0235H18.1+ SGN-E263895- 0.903 258 1.004 C PGS_C08HBa0235H18.1+_SGN-E263895- (41370 41627) Alignment (genomic DNA sequence = upper lines): CCAGTTTGGC ATGAACCTCT ACCAGCACCA TTAAAATTGC AATTAGTACG ACCCCATATA 41429 ||||| || | ||| |||||| || ||| || ||||| |||| || |||||| |||||||||| CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG ACCCCATATA 60 CGTGCCATCT TAGTGCCCCT CGGCGCATTG ATGACCCATG TTTGGCCTCG ATCGAGACGT 41489 ||| |||||| |||| ||||| ||| |||||| |||||||||| |||||||||| || ||||||| CGT-CCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG TTTGGCCTCG ATTGAGACGT 119 CGACCACCGC CTATCGGGGT CGATGCTGCC CAAACGGTGT AGGGACAATT GTTGCGTACC 41549 |||||||||| ||||||| || |||||| ||| |||||||||| | ||||| || |||||||||| CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT ATGGACAGTT GTTGCGTACC 179 TCGATAGTGG CAGCATAAGT GTAAGTCACT AAAGCAAGGA AGAAGAAAAT AAAAGAAGAT 41609 || ||||||| |||||||||| |||||||| || ||||| |||||| || |||||||||| TCAATAGTGG CAGCATAAGT ATAAGTCACA CAAAGAAGGA AGAAGAGAAC AAAAGAAGAT 239 GTCAAGTAGC CCATGTTT 41627 |||||||||| |||||||| GTCAAGTAGC CCATGTTT 257 hqPGS_C08HBa0235H18.1+_SGN-E263895- (41370 41627) ******************************************************************************** EST sequence 850 -strand 193 n (File: SGN-E335797-) 1 TGACATGAAC TCTACCCAGC ACCATCAAAG TTGCAATTCG TACGACCCCA TATACGTGCC 61 ATCTTAGTGC CCCTCGGTGC ATTGATGACC CATGTTTGGC CTCGATCAAG ACGTCGACCA 121 CCGCCTATTG GGGTCGACGC CGCCCAGACG GTGTATGGAC AGTTGTTGCG TACCTCGAAA 181 GTGGCAGCAT AAG Predicted gene structure (within gDNA segment 40415 to 42753): Exon 1 41376 41568 ( 193 n); cDNA 1 193 ( 193 n); score: 0.915 MATCH C08HBa0235H18.1+ SGN-E335797- 0.915 193 1.000 C PGS_C08HBa0235H18.1+_SGN-E335797- (41376 41568) Alignment (genomic DNA sequence = upper lines): TGGCATGAAC CTCTA-CCAG CACCATTAAA ATTGCAATTA GTACGACCCC ATATACGTGC 41434 || ||||||| |||| |||| |||||| ||| |||||||| |||||||||| |||||||||| TGACATGAAC -TCTACCCAG CACCATCAAA GTTGCAATTC GTACGACCCC ATATACGTGC 59 CATCTTAGTG CCCCTCGGCG CATTGATGAC CCATGTTTGG CCTCGATCGA GACGTCGACC 41494 |||||||||| |||||||| | |||||||||| |||||||||| |||||||| | |||||||||| CATCTTAGTG CCCCTCGGTG CATTGATGAC CCATGTTTGG CCTCGATCAA GACGTCGACC 119 ACCGCCTATC GGGGTCGATG CTGCCCAAAC GGTGTAGGGA CAATTGTTGC GTACCTCGAT 41554 ||||||||| |||||||| | | ||||| || |||||| ||| || ||||||| ||||||||| ACCGCCTATT GGGGTCGACG CCGCCCAGAC GGTGTATGGA CAGTTGTTGC GTACCTCGAA 179 AGTGGCAGCA TAAG 41568 |||||||||| |||| AGTGGCAGCA TAAG 193 hqPGS_C08HBa0235H18.1+_SGN-E335797- (41376 41568) ******************************************************************************** EST sequence 728 -strand 260 n (File: SGN-E255362-) 1 CATGTACCTC TGCCTGCAGC ATTAAAGTTG CAACCAGTAC GACCCCATAT ACGTGCCATC 61 TTAGTTCCCC TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG TCGACCACCG 121 CCTATCGGAG TCGATGCCGC CCAAACGGTG TATGGACAGT TGTTGCGTAC CTCAATAGTG 181 GCAGCATAAG TATAACGTCA CACACAGAAG GAAGAAGAGA ACAAAAGAAG ATGTCAAGTA 241 GCCCATGTTT GCCTGCAGCC Predicted gene structure (within gDNA segment 40454 to 43426): Exon 1 41379 41634 ( 256 n); cDNA 1 257 ( 257 n); score: 0.889 MATCH C08HBa0235H18.1+ SGN-E255362- 0.889 256 0.985 C PGS_C08HBa0235H18.1+_SGN-E255362- (41379 41634) Alignment (genomic DNA sequence = upper lines): CATGAACCTC TACCAGCACC ATTAAAATTG CAATTAGTAC GACCCCATAT ACGTGCCATC 41438 |||| ||||| | || ||| | |||||| ||| ||| ||||| |||||||||| |||||||||| CATGTACCTC TGCCTGCAGC ATTAAAGTTG CAACCAGTAC GACCCCATAT ACGTGCCATC 60 TTAGTGCCCC TCGGCGCATT GATGACCCAT GTTTGGCCTC GATCGAGACG TCGACCACCG 41498 ||||| |||| |||| ||||| |||||||||| |||||||||| ||| |||||| |||||||||| TTAGTTCCCC TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG TCGACCACCG 120 CCTATCGGGG TCGATGCTGC CCAAACGGTG TAGGGACAAT TGTTGCGTAC CTCGATAGTG 41558 |||||||| | ||||||| || |||||||||| || ||||| | |||||||||| ||| |||||| CCTATCGGAG TCGATGCCGC CCAAACGGTG TATGGACAGT TGTTGCGTAC CTCAATAGTG 180 GCAGCATAAG TGTAA-GTCA CTAAAGCAAG GAAGAAGAAA ATAAAAGAAG ATGTCAAGTA 41617 |||||||||| | ||| |||| | | ||| |||||||| | | |||||||| |||||||||| GCAGCATAAG TATAACGTCA CACACAGAAG GAAGAAGAGA ACAAAAGAAG ATGTCAAGTA 240 GCCCATGTTT GTGTACA 41634 |||||||||| | | || GCCCATGTTT GCCTGCA 257 hqPGS_C08HBa0235H18.1+_SGN-E255362- (41379 41634) ******************************************************************************** EST sequence 872 -strand 221 n (File: SGN-E200076-) 1 GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 61 TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATGCC 121 GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA AGTATAAGTC 181 ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT A Predicted gene structure (within gDNA segment 40634 to 43216): Exon 1 41398 41617 ( 220 n); cDNA 2 221 ( 220 n); score: 0.918 MATCH C08HBa0235H18.1+ SGN-E200076- 0.918 220 0.995 C PGS_C08HBa0235H18.1+_SGN-E200076- (41398 41617) Alignment (genomic DNA sequence = upper lines): CATTAAAATT GCAATTAGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC CTCGGCGCAT 41457 ||||||| || |||| |||| |||||||||| |||||||||| |||||| ||| ||||| |||| CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC CTCGGAGCAT 61 TGATGACCCA TGTTTGGCCT CGATCGAGAC GTCGACCACC GCCTATCGGG GTCGATGCTG 41517 |||||||||| |||||||||| |||| ||||| |||||||||| ||||||||| |||||||| | TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC GCCTATCGGA GTCGATGCCG 121 CCCAAACGGT GTAGGGACAA TTGTTGCGTA CCTCGATAGT GGCAGCATAA GTGTAAGTCA 41577 |||||||||| ||| ||||| |||||||||| |||| ||||| |||||||||| || ||||||| CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT GGCAGCATAA GTATAAGTCA 181 CTAAAGCAAG GAAGAAGAAA ATAAAAGAAG ATGTCAAGTA 41617 | || ||| |||||||| | | |||||||| |||||||||| CACAAAGAAG GAAGAAGAGA ACAAAAGAAG ATGTCAAGTA 221 hqPGS_C08HBa0235H18.1+_SGN-E200076- (41398 41617) ******************************************************************************** EST sequence 1041 -strand 620 n (File: SGN-E238551-) 1 CTATTATTTC CCAAAATCTG GAAGTTATCA TCACAAGAAC ATCTACTTCG AATTACTAAA 61 TCTAAGAGTA TCTAAGAAGC TAAAATACAT AAACAGCTAG TCCATGCCGG AACTTCAAGG 121 CATCAAGACA TGAAGAAGAA GATCCAGTCC AAGCTAGAAG CTTTGTTTTA TCGAAAAAAG 181 GTGATTTTTC GAAAAGAGTT TGTTTTATTT TAAAGTATTT TTCGACTTTA GGAGTCGCCA 241 CTTAATTTTT AAGAAAAATC AAGAAAACTC ATTCTCAAAA CAATTTAAAC AGAAAAGTCG 301 TTTTGAAAAT ATTTTTTAGG ATTCGGGATT CTTATTAGCG TCTTAGGAAG GTGTTTAAGG 361 CACCTAAGAC ACTCCGTTAA ATACGGTTTT CCAACGACTA ACTTATTTGA TTATTTTTAT 421 TTTTACCCTT TGCAAATTTA TTTGAACTTT TATCACGATT TACTTAGCCA AACTTTGCAA 481 ATTTGAGATA TTAATCTTTT AAGATTCCGT CTTAGTTAAA CTTTCTAAGC CTTAACTCTC 541 TAAGCAGACT TTCAAATTTT AAACCTCTAT CGTTTCAAAA CTTCAATTTT TATTTTTTAG 601 TTTCATAAAG CAAAAGGCGT Predicted gene structure (within gDNA segment 39486 to 46247): Exon 1 42039 42080 ( 42 n); cDNA 237 276 ( 40 n); score: 0.643 Intron 1 42081 42395 ( 315 n); Pd: 0.900 (s: 0.64), Pa: 0.000 (s: 0) Exon 2 42396 42417 ( 22 n); cDNA 277 297 ( 21 n); score: 0.773 Intron 2 42418 44023 (1606 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.75) Exon 3 44024 44264 ( 241 n); cDNA 298 541 ( 244 n); score: 0.763 MATCH C08HBa0235H18.1+ SGN-E238551- 0.763 305 0.492 C PGS_C08HBa0235H18.1+_SGN-E238551- (42039 42080,42396 42417,44024 44264) Alignment (genomic DNA sequence = upper lines): GCAAGAAAGT TTTTGGAATT AAACACAACA AAAATAATCC TCATATCCTA TTTTTAACTA 42098 || | | | |||| || ||| ||| | ||| | || | || GCCACTTAAT TTTT--AAGA AAAATCAAGA AAACTCATTC TC........ .......... 276 ATACTTTAAT GTGTCTAGAT TTTTATTAAT ATGTCTGCTT TATATTAAAA TTTCATTTTT 42158 .......... .......... .......... .......... .......... .......... 276 TTAAAAAATA ATAGGAAAAT TCTCAGACCG TCCATAAAGA AAAATCAAAA TTAAATAGTT 42218 .......... .......... .......... .......... .......... .......... 276 TCTTCTATTC AAAATTAAGA TGAGTTGTCA CCATACTTTT AGAATTTTTG ATTTTTTTAT 42278 .......... .......... .......... .......... .......... .......... 276 GCAAGAATAA GACTTACGAG AACAAATGGT AATCAAAATA AGATAGGAAA AAGGGTCAAA 42338 .......... .......... .......... .......... .......... .......... 276 TTTCCTTTTT TTTTCGCCTA ACTTATTTTA TTAACTAATT CATATTTAGT TGTGTCTAAA 42398 ||| .......... .......... .......... .......... .......... .......AAA 279 ACAGGTTTAA CTGATAAAGG TTAAATAAAA AAAAATGTTA CTACTGTGTT GATTTATCAA 42458 ||| || || | || |||| ACAATTTAAA CAGA-AAAG. .......... .......... .......... .......... 297 TTTTGGGTTA TTGAATTAAC CGTCTTAGAA TATTAGTTCA GCTTCCAATT TTAAAATTTT 42518 .......... .......... .......... .......... .......... .......... 297 AGTTAATGAT TAAATCAATA ACCTAATAAA ATTATATTAA AACTACTTTT TTTTATTTTT 42578 .......... .......... .......... .......... .......... .......... 297 ATTTCTATTT ATATAATAAT GACTTTATTT AAACTTCAAA TACAAAACCT ATTTTCTTTT 42638 .......... .......... .......... .......... .......... .......... 297 GCATTTTATA ATCAATGTAT TGATGCTGAT GTGTTTTGTG CACTTGTTAA AGTTGTGTTA 42698 .......... .......... .......... .......... .......... .......... 297 TTATATTATT TTAATATTAA TATAATAAAT GAAGCAGTGT TTTTGCTTGT AAATTTCTAG 42758 .......... .......... .......... .......... .......... .......... 297 ATTTCTATTT ATGAAGTTCT GACTTAAACG TATCTAACGA ATAATTAAAT AAAAAATCAA 42818 .......... .......... .......... .......... .......... .......... 297 GTATTTAAGG ATCGATAGTT GATTATCTAA ATTATTGATC ATTGATTTAG CATGTTTATA 42878 .......... .......... .......... .......... .......... .......... 297 AATAAAAAAT CGATAAACTA AACCACAAAA TCTAACCAGT AAACATTGAG ACCATATCGA 42938 .......... .......... .......... .......... .......... .......... 297 ATACACCTAC AAGTAATTCA TTAATAAGTT TCAAATTCAA TATACAACAA CAAAAAAAAA 42998 .......... .......... .......... .......... .......... .......... 297 AGGCAAGAAA ATGTTGAAGT AAAGTAAATA ACGACACACG ATTATTAAAG ATATTATTAT 43058 .......... .......... .......... .......... .......... .......... 297 TTGTTCATCA ATGATCAAAA TATATAAGTT GAAGGGAGTG TGTATACATT ACACAAATAA 43118 .......... .......... .......... .......... .......... .......... 297 GATATTATTA TCTCACCCAA CATAAATAGT TTAACAAACC TTTTAAGATA CTTATTGTTT 43178 .......... .......... .......... .......... .......... .......... 297 TGGTAATTTT TCATACCATA TAATTTGTAG CAAAATATGC TTTATATTGT GGCATTAATT 43238 .......... .......... .......... .......... .......... .......... 297 ATGGGCAAAA AACAACCTTA TAATTTGTAC TATCACTAGG GCAAGCAAAT GTGCTAGTAG 43298 .......... .......... .......... .......... .......... .......... 297 CATCATCTTG TGGGTAGCTA TAGGCATCAG GGCATCTCTG TTTGAAAAAT TTCGACCACT 43358 .......... .......... .......... .......... .......... .......... 297 CAGTAGGACT ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG 43418 .......... .......... .......... .......... .......... .......... 297 GATTGTTACA TCCTCCGGTT ACTTTAAGTT GACTAGGGCA TTCACCGTTT ATATTGGCGG 43478 .......... .......... .......... .......... .......... .......... 297 TGCATTGAAT TGAGTGGCAT TTTCCTCCAC TGGAATTGGT TGTGGCGAAA GTCATCGGTA 43538 .......... .......... .......... .......... .......... .......... 297 TATTAAATCC ATCGACTAAA GAAATGTCCC AGAAATCTAG GTTGTTAAAC TGGTTCAAGG 43598 .......... .......... .......... .......... .......... .......... 297 CGTATTCGGT CAAGGTGTTT GGCGGTTTAC CCCACCCGGT ACACTGCAAG ACTCCACCAC 43658 .......... .......... .......... .......... .......... .......... 297 AATCACCAGT CTCACAAGAA CCTCTACCAG CACCGTCAAA GTTGCATTTA GTACGACCCC 43718 .......... .......... .......... .......... .......... .......... 297 ATATACGTGC CATCTTAGTG CCCCTCAGTG CATTGATGGT CCAAGTCTGG CCTTGATTGA 43778 .......... .......... .......... .......... .......... .......... 297 GACGTTGAAA AATCTTTTTT TTTTCATGTT TCTTGTTTAT TTTAAATTTT ATATATTTGT 43838 .......... .......... .......... .......... .......... .......... 297 TTGTTTGTTT TTTTCTCTGA AAGAACGTTT CTCTCTTCTT CTTTTTTTTA TTATTTTATT 43898 .......... .......... .......... .......... .......... .......... 297 TTATCATTAT TTTTAGTATA TTATTATTTT ATAGTTTTGT CTTCTTCTTT TCTTTTTTTT 43958 .......... .......... .......... .......... .......... .......... 297 TTTCCAATTA TTTTGTACTA ATTTTGTTAT TCTTTTATCG TTTTTTTTAA TTGTGTTGTT 44018 .......... .......... .......... .......... .......... .......... 297 ATTATTTGTT TTGA-AACAT T-TTAAGGGT TCGGGATTCC TATTAGTATC TTAGGAAGGT 44076 | ||| |||| || || | || ||| | ||||||||| |||||| || |||||||||| .....TCGTT TTGAAAATAT TTTTTAGGAT TCGGGATTCT TATTAGCGTC TTAGGAAGGT 352 G--TAAGGCA CCCAAAACAC TCCGTTAACT TACGGTTTTC CAATGATTAA C-TATTTGAT 44133 | ||||||| || || |||| |||||||| | ||||||||| ||| || ||| | |||||||| GTTTAAGGCA CCTAAGACAC TCCGTTAAAT -ACGGTTTTC CAACGACTAA CTTATTTGAT 411 TATTTTTATT TTTAACCTTT GCAAATTTAT TTGAACTTTT AACATGACTT ACTTAGCCAA 44193 |||||||||| |||| ||||| |||||||||| |||||||||| | || || || |||||||||| TATTTTTATT TTTACCCTTT GCAAATTTAT TTGAACTTTT ATCACGATTT ACTTAGCCAA 471 ACTTAGCCAA TTTTGAAATA TTTATTGTTT ATCTTGCCAG TTTACGAAAC CATTTCAAAG 44253 |||| | ||| ||||| ||| || || ||| | | || ||| || | |||| ||| ACTTTG-CAA ATTTGAGATA TTAATCTTTT AAGATTCCGT CTTAGTTAAA C-TTTCTAAG 529 -TTAAGCTTA CT 44264 | | || || CCTTAACTCT CT 541 hqPGS_C08HBa0235H18.1+_SGN-E238551- (42396 42417,44024 44264) ******************************************************************************** EST sequence 1069 -strand 666 n (File: SGN-E368629-) 1 TTTTTTTTTT TTTTTTTTTT TTTTTTATAA AAACCAATTC AATAACTATT ATTTCCCAAA 61 ATCTGGAAGT TATCATCACA AGAACATCTA CTTCGAATTA CTAAATCTAG AAGTATCTAA 121 GAGCCTAAAA TACATAACAC AGTTAGTCCA TGCCGAAACT TCAAGGCATC AAGACATAAA 181 GAAGAAGATC CAGTCCAAGC TAGAAGCTTT GTTTTATCGA AAAAAGGTGA TTTTTCGAAA 241 AGAGTTTGTT TTATTTTAAA GTATTTTTCG ACTTTAGGAG TCGCCACTTA ATTTTTAAGA 301 AAAATCAAGA AAACTCATTC TCAAAACAAT TTAAACAGAA AAGTCGTTTT GAAAATATTT 361 TTTAGGATTC GGGATTCTTA TTAGCGTCTT AGGAAGGTGT TTAAGGCACC TAAGACACTC 421 CGTTAAATAC GGTTTTCCAA CGACTAACTT ATTTGATTAT TTTTATTTTT ACCCTTTGCA 481 AATTTATTTG AACTTTTATC ACGATTTACT TAGCCAAACT TTGCAAATTT GAGATATTAA 541 TCTTTTAAGA TTCCGTCTTA GTTAAACTTT CTAAGCCTTA ACTCTCTAAG CAGACTTTCA 601 AATTTTAAAC CTCTATCGTT TCAAAACTTC AATTTTTATT TTTTAGTTTC ATAAAGCAAA 661 AGGCGT Predicted gene structure (within gDNA segment 39026 to 46247): Exon 1 42039 42080 ( 42 n); cDNA 283 322 ( 40 n); score: 0.643 Intron 1 42081 42395 ( 315 n); Pd: 0.900 (s: 0.64), Pa: 0.000 (s: 0) Exon 2 42396 42417 ( 22 n); cDNA 323 343 ( 21 n); score: 0.773 Intron 2 42418 44023 (1606 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.75) Exon 3 44024 44264 ( 241 n); cDNA 344 587 ( 244 n); score: 0.763 PPA cDNA 28 1 MATCH C08HBa0235H18.1+ SGN-E368629- 0.763 305 0.458 C PGS_C08HBa0235H18.1+_SGN-E368629- (42039 42080,42396 42417,44024 44264) Alignment (genomic DNA sequence = upper lines): GCAAGAAAGT TTTTGGAATT AAACACAACA AAAATAATCC TCATATCCTA TTTTTAACTA 42098 || | | | |||| || ||| ||| | ||| | || | || GCCACTTAAT TTTT--AAGA AAAATCAAGA AAACTCATTC TC........ .......... 322 ATACTTTAAT GTGTCTAGAT TTTTATTAAT ATGTCTGCTT TATATTAAAA TTTCATTTTT 42158 .......... .......... .......... .......... .......... .......... 322 TTAAAAAATA ATAGGAAAAT TCTCAGACCG TCCATAAAGA AAAATCAAAA TTAAATAGTT 42218 .......... .......... .......... .......... .......... .......... 322 TCTTCTATTC AAAATTAAGA TGAGTTGTCA CCATACTTTT AGAATTTTTG ATTTTTTTAT 42278 .......... .......... .......... .......... .......... .......... 322 GCAAGAATAA GACTTACGAG AACAAATGGT AATCAAAATA AGATAGGAAA AAGGGTCAAA 42338 .......... .......... .......... .......... .......... .......... 322 TTTCCTTTTT TTTTCGCCTA ACTTATTTTA TTAACTAATT CATATTTAGT TGTGTCTAAA 42398 ||| .......... .......... .......... .......... .......... .......AAA 325 ACAGGTTTAA CTGATAAAGG TTAAATAAAA AAAAATGTTA CTACTGTGTT GATTTATCAA 42458 ||| || || | || |||| ACAATTTAAA CAGA-AAAG. .......... .......... .......... .......... 343 TTTTGGGTTA TTGAATTAAC CGTCTTAGAA TATTAGTTCA GCTTCCAATT TTAAAATTTT 42518 .......... .......... .......... .......... .......... .......... 343 AGTTAATGAT TAAATCAATA ACCTAATAAA ATTATATTAA AACTACTTTT TTTTATTTTT 42578 .......... .......... .......... .......... .......... .......... 343 ATTTCTATTT ATATAATAAT GACTTTATTT AAACTTCAAA TACAAAACCT ATTTTCTTTT 42638 .......... .......... .......... .......... .......... .......... 343 GCATTTTATA ATCAATGTAT TGATGCTGAT GTGTTTTGTG CACTTGTTAA AGTTGTGTTA 42698 .......... .......... .......... .......... .......... .......... 343 TTATATTATT TTAATATTAA TATAATAAAT GAAGCAGTGT TTTTGCTTGT AAATTTCTAG 42758 .......... .......... .......... .......... .......... .......... 343 ATTTCTATTT ATGAAGTTCT GACTTAAACG TATCTAACGA ATAATTAAAT AAAAAATCAA 42818 .......... .......... .......... .......... .......... .......... 343 GTATTTAAGG ATCGATAGTT GATTATCTAA ATTATTGATC ATTGATTTAG CATGTTTATA 42878 .......... .......... .......... .......... .......... .......... 343 AATAAAAAAT CGATAAACTA AACCACAAAA TCTAACCAGT AAACATTGAG ACCATATCGA 42938 .......... .......... .......... .......... .......... .......... 343 ATACACCTAC AAGTAATTCA TTAATAAGTT TCAAATTCAA TATACAACAA CAAAAAAAAA 42998 .......... .......... .......... .......... .......... .......... 343 AGGCAAGAAA ATGTTGAAGT AAAGTAAATA ACGACACACG ATTATTAAAG ATATTATTAT 43058 .......... .......... .......... .......... .......... .......... 343 TTGTTCATCA ATGATCAAAA TATATAAGTT GAAGGGAGTG TGTATACATT ACACAAATAA 43118 .......... .......... .......... .......... .......... .......... 343 GATATTATTA TCTCACCCAA CATAAATAGT TTAACAAACC TTTTAAGATA CTTATTGTTT 43178 .......... .......... .......... .......... .......... .......... 343 TGGTAATTTT TCATACCATA TAATTTGTAG CAAAATATGC TTTATATTGT GGCATTAATT 43238 .......... .......... .......... .......... .......... .......... 343 ATGGGCAAAA AACAACCTTA TAATTTGTAC TATCACTAGG GCAAGCAAAT GTGCTAGTAG 43298 .......... .......... .......... .......... .......... .......... 343 CATCATCTTG TGGGTAGCTA TAGGCATCAG GGCATCTCTG TTTGAAAAAT TTCGACCACT 43358 .......... .......... .......... .......... .......... .......... 343 CAGTAGGACT ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG 43418 .......... .......... .......... .......... .......... .......... 343 GATTGTTACA TCCTCCGGTT ACTTTAAGTT GACTAGGGCA TTCACCGTTT ATATTGGCGG 43478 .......... .......... .......... .......... .......... .......... 343 TGCATTGAAT TGAGTGGCAT TTTCCTCCAC TGGAATTGGT TGTGGCGAAA GTCATCGGTA 43538 .......... .......... .......... .......... .......... .......... 343 TATTAAATCC ATCGACTAAA GAAATGTCCC AGAAATCTAG GTTGTTAAAC TGGTTCAAGG 43598 .......... .......... .......... .......... .......... .......... 343 CGTATTCGGT CAAGGTGTTT GGCGGTTTAC CCCACCCGGT ACACTGCAAG ACTCCACCAC 43658 .......... .......... .......... .......... .......... .......... 343 AATCACCAGT CTCACAAGAA CCTCTACCAG CACCGTCAAA GTTGCATTTA GTACGACCCC 43718 .......... .......... .......... .......... .......... .......... 343 ATATACGTGC CATCTTAGTG CCCCTCAGTG CATTGATGGT CCAAGTCTGG CCTTGATTGA 43778 .......... .......... .......... .......... .......... .......... 343 GACGTTGAAA AATCTTTTTT TTTTCATGTT TCTTGTTTAT TTTAAATTTT ATATATTTGT 43838 .......... .......... .......... .......... .......... .......... 343 TTGTTTGTTT TTTTCTCTGA AAGAACGTTT CTCTCTTCTT CTTTTTTTTA TTATTTTATT 43898 .......... .......... .......... .......... .......... .......... 343 TTATCATTAT TTTTAGTATA TTATTATTTT ATAGTTTTGT CTTCTTCTTT TCTTTTTTTT 43958 .......... .......... .......... .......... .......... .......... 343 TTTCCAATTA TTTTGTACTA ATTTTGTTAT TCTTTTATCG TTTTTTTTAA TTGTGTTGTT 44018 .......... .......... .......... .......... .......... .......... 343 ATTATTTGTT TTGA-AACAT T-TTAAGGGT TCGGGATTCC TATTAGTATC TTAGGAAGGT 44076 | ||| |||| || || | || ||| | ||||||||| |||||| || |||||||||| .....TCGTT TTGAAAATAT TTTTTAGGAT TCGGGATTCT TATTAGCGTC TTAGGAAGGT 398 G--TAAGGCA CCCAAAACAC TCCGTTAACT TACGGTTTTC CAATGATTAA C-TATTTGAT 44133 | ||||||| || || |||| |||||||| | ||||||||| ||| || ||| | |||||||| GTTTAAGGCA CCTAAGACAC TCCGTTAAAT -ACGGTTTTC CAACGACTAA CTTATTTGAT 457 TATTTTTATT TTTAACCTTT GCAAATTTAT TTGAACTTTT AACATGACTT ACTTAGCCAA 44193 |||||||||| |||| ||||| |||||||||| |||||||||| | || || || |||||||||| TATTTTTATT TTTACCCTTT GCAAATTTAT TTGAACTTTT ATCACGATTT ACTTAGCCAA 517 ACTTAGCCAA TTTTGAAATA TTTATTGTTT ATCTTGCCAG TTTACGAAAC CATTTCAAAG 44253 |||| | ||| ||||| ||| || || ||| | | || ||| || | |||| ||| ACTTTG-CAA ATTTGAGATA TTAATCTTTT AAGATTCCGT CTTAGTTAAA C-TTTCTAAG 575 -TTAAGCTTA CT 44264 | | || || CCTTAACTCT CT 587 hqPGS_C08HBa0235H18.1+_SGN-E368629- (42396 42417,44024 44264) ******************************************************************************** EST sequence 884 -strand 353 n (File: SGN-E337179-) 1 TTTTTTTTTT TTTTTTTTTT GTTCTTTTTT TTTTTTTTTT TNNAAGCAGA CCGTTTAAGA 61 TGCTTATTAT TTTGGTAATT TTTTCATACC ATTCAATTTG TAGCAAAATA TGCTTTATTG 121 TGGCATCAAT TATGGGCAAA AAACAACCCT ATAATTTGTA CTACCACTAG GGCAAGTGAA 181 TAAGCTAGTA GGATCATCTT GAGGGTAGCT ATACGCATTA GGGCACCTTT GTTTGAAAAA 241 TCTCGAAAAT TTTGTAGGAC CACATGGGCC TTGAGTACAA CAATATTGTT GTCCTCCGAA 301 CGTGGTACAA GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GGACTAGGGC ATA Predicted gene structure (within gDNA segment 41650 to 44276): Exon 1 43156 43459 ( 304 n); cDNA 50 352 ( 303 n); score: 0.873 PPA cDNA 41 22 MATCH C08HBa0235H18.1+ SGN-E337179- 0.873 304 0.861 C PGS_C08HBa0235H18.1+_SGN-E337179- (43156 43459) Alignment (genomic DNA sequence = upper lines): ACCTTTTAAG ATACTTATTG TTTTGGTAA- TTTTTCATAC CATATAATTT GTAGCAAAAT 43214 ||| |||||| || |||||| ||||||||| |||||||||| ||| ||||| |||||||||| ACCGTTTAAG ATGCTTATTA TTTTGGTAAT TTTTTCATAC CATTCAATTT GTAGCAAAAT 109 ATGCTTTATA TTGTGGCATT AATTATGGGC AAAAAACAAC CTTATAATTT GTACTATCAC 43274 |||| || || ||||||||| |||||||||| |||||||||| | |||||||| |||||| ||| ATGC-TT-TA TTGTGGCATC AATTATGGGC AAAAAACAAC CCTATAATTT GTACTACCAC 167 TAGGGCAAGC AAATGTGCTA GTAGCATCAT CTTGTGGGTA GCTATAGGCA TCAGGGCATC 43334 ||||||||| ||| |||| |||| ||||| |||| ||||| |||||| ||| | |||||| | TAGGGCAAGT GAATAAGCTA GTAGGATCAT CTTGAGGGTA GCTATACGCA TTAGGGCACC 227 TCTGTTTGAA AAATTTCGAC CACTCAGTAG GACTACATGG ACCTTGGGTG CAACAATATT 43394 | |||||||| |||| |||| | | |||| ||| |||||| ||||| || |||||||||| TTTGTTTGAA AAATCTCGAA AATTTTGTAG GACCACATGG GCCTTGAGTA CAACAATATT 287 GTTGTCCTCC AAACGTGGTA CAAGGATTGT TACATCCTCC GGTTACTTTA AGTTGACTAG 43454 |||||||||| ||||||||| ||||| |||| |||||||||| || ||| || ||| |||||| GTTGTCCTCC GAACGTGGTA CAAGGGTTGT TACATCCTCC GGGTACCCTA AGTGGACTAG 347 GGCAT 43459 ||||| GGCAT 352 hqPGS_C08HBa0235H18.1+_SGN-E337179- (43156 43459) ******************************************************************************** EST sequence 624 -strand 683 n (File: SGN-E212433-) 1 ATCAGCAACA CCATTAGGAC AAAAGACANC CCTATAGTTT GTACTACCAC CAGGGCAAGT 61 AAATGTGCTT GTAGGATCGT CTTGTGGGTA GCTATAAGCA TCGGGACATC TTTTCTTGAA 121 AAATTTGGAC AACTCTGTAG GGCCACATGG ACCTTGGGTG CAACAATATT GTTGTCCTCC 181 AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC 241 ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 301 AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 361 AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 421 TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 481 ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 541 TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA 601 TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA 661 GAAGAGAACA AAAGAAGATG TCA Predicted gene structure (within gDNA segment 41319 to 46037): Exon 1 43224 43781 ( 558 n); cDNA 1 557 ( 557 n); score: 0.844 MATCH C08HBa0235H18.1+ SGN-E212433- 0.844 558 0.817 C PGS_C08HBa0235H18.1+_SGN-E212433- (43224 43781) Alignment (genomic DNA sequence = upper lines): ATTGTGGCAT TAATTATGGG CAAAAAACAA CCTTATAATT TGTACTATCA CTAGGGCAAG 43283 || |||| || ||||| ||| || |||| || ||||||| || | |||||||| ATCAGCAACA CCATTA-GGA CAAAAGACAN CCCTATAGTT TGTACTACCA CCAGGGCAAG 59 CAAATGTGCT AGTAGCATCA TCTTGTGGGT AGCTATAGGC ATCAGGGCAT CTCTGTTTGA 43343 ||||||||| |||| ||| |||||||||| ||||||| || ||| || ||| || | |||| TAAATGTGCT TGTAGGATCG TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA 119 AAAATTTCGA CCACTCAGTA GGACTACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC 43403 ||||||| || | |||| ||| || | ||||| |||||||||| |||||||||| |||||||||| AAAATTTGGA CAACTCTGTA GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC 179 CAAACGTGGT ACAAGGATTG TTACATCCTC CGGTTACTTT AAGTTGACTA GGGCATTCAC 43463 |||||||||| |||||| ||| |||||||||| | | ||| || ||| | | || ||||||| CAAACGTGGT ACAAGGGTTG TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC 239 CGTTTATATT GGCGGTGCAT TGAATTGAGT GGCATTTTCC TCCACTGGAA TTGGTTGTGG 43523 | |||||||| ||| ||||| ||||||| || | |||||||| |||||| | || |||| || CATTTATATT GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG 299 CGAAAGTCAT CGGTATATTA AATCCATCGA CTAAAGAAAT GTCCCAGAAA TCTAGGTTGT 43583 | |||||||| || |||||| |||||||||| |||||||||| |||||| ||| |||| |||| CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC 359 TAAACTGGTT CAAGGCGTAT TCGGTCAAGG TGTTTGGCGG TTTACCCCAC CCGGTACACT 43643 ||||||||| ||||||||| |||| | || ||||||| || ||| ||||| |||||||||| TAAACTGGTC CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT 419 GCAAGACTCC ACCACAATCA CCAGTCTCAC AAGAACCTCT ACCAGCACCG TCAAAGTTGC 43703 | |||||||| |||||||||| ||||||| || | | |||||| || ||| | | |||||||| GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC 479 ATTTAGTACG ACCCCATATA CGTGCCATCT TAGTGCCCCT CAGTGCATTG ATGGTCCAAG 43763 | |||||| |||||||||| |||||||||| |||| ||||| | | |||||| ||| ||| | AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG 539 TCTGGCCTTG ATTGAGAC 43781 | |||||| | |||||||| TTTGGCCTCG ATTGAGAC 557 hqPGS_C08HBa0235H18.1+_SGN-E212433- (43224 43781) ******************************************************************************** EST sequence 962 -strand 550 n (File: SGN-E256630-) 1 ATTAGGACAA AAGACAACCC TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT 61 AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA 121 CTCTGTAGGG CCACATGGAC TTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA 181 AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC 241 CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG 301 AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA 361 GGCGTACTCG GATAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC 421 ACAATCACCA GTCTGACATG TACCTCTGCT TGCAGCATTA AAGTTGCAAC CAGTACGACC 481 CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG ACCCATGTTT GGCTTCGATT 541 GAGACGTCGC Predicted gene structure (within gDNA segment 41358 to 44827): Exon 1 43241 43781 ( 541 n); cDNA 5 545 ( 541 n); score: 0.856 MATCH C08HBa0235H18.1+ SGN-E256630- 0.856 541 0.984 C PGS_C08HBa0235H18.1+_SGN-E256630- (43241 43781) Alignment (genomic DNA sequence = upper lines): GGGCAAAAAA CAACCTTATA ATTTGTACTA TCACTAGGGC AAGCAAATGT GCTAGTAGCA 43300 || ||||| | ||||| |||| ||||||||| ||| ||||| ||| |||||| ||| |||| | GGACAAAAGA CAACCCTATA GTTTGTACTA CCACCAGGGC AAGTAAATGT GCTTGTAGGA 64 TCATCTTGTG GGTAGCTATA GGCATCAGGG CATCTCTGTT TGAAAAATTT CGACCACTCA 43360 || ||||||| |||||||||| ||||| || ||||| | | |||||||||| ||| |||| TCGTCTTGTG GGTAGCTATA AGCATCGGGA CATCTTTTCT TGAAAAATTT GGACAACTCT 124 GTAGGACTAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGA 43420 ||||| | || |||||| ||| |||||||||| |||||||||| |||||||||| ||||||||| GTAGGGCCAC ATGGACTTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 184 TTGTTACATC CTCCGGTTAC TTTAAGTTGA CTAGGGCATT CACCGTTTAT ATTGGCGGTG 43480 |||||||||| |||| | ||| ||||| | ||| |||| |||| ||||| |||||| ||| TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 244 CATTGAATTG AGTGGCATTT TCCTCCACTG GAATTGGTTG TGGCGAAAGT CATCGGTATA 43540 || ||||||| ||| ||||| ||||||||| | || |||| ||| ||||| ||| || ||| CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 304 TTAAATCCAT CGACTAAAGA AATGTCCCAG AAATCTAGGT TGTTAAACTG GTTCAAGGCG 43600 |||||||||| |||||||||| ||||||||| ||||||| || || ||||||| || ||||||| TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 364 TATTCGGTCA AGGTGTTTGG CGGTTTACCC CACCCGGTAC ACTGCAAGAC TCCACCACAA 43660 || |||| | ||||||||| ||||| ||| || ||||||| |||| ||||| |||||||||| TACTCGGATA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA 424 TCACCAGTCT CACAAGAACC TCTACCAGCA CCGTCAAAGT TGCATTTAGT ACGACCCCAT 43720 |||||||||| ||| | ||| ||| | ||| | | ||||| |||| ||| |||||||||| TCACCAGTCT GACATGTACC TCTGCTTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT 484 ATACGTGCCA TCTTAGTGCC CCTCAGTGCA TTGATGGTCC AAGTCTGGCC TTGATTGAGA 43780 |||||||||| ||||||| || |||| | ||| |||||| || | || |||| | |||||||| ATACGTGCCA TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTGGCT TCGATTGAGA 544 C 43781 | C 545 hqPGS_C08HBa0235H18.1+_SGN-E256630- (43241 43781) ******************************************************************************** EST sequence 573 -strand 652 n (File: SGN-E213536-) 1 CCAAGGGAAA TTTGGATCAG CAACACCATT AGGACAAAAG ACAACCNTAT AGTTTGTACT 61 ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG 121 ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA 181 ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC 241 GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT 301 AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA 361 AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC 421 CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC 481 AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC 541 ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC 601 CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT AA Predicted gene structure (within gDNA segment 41169 to 45577): Exon 1 43244 43781 ( 538 n); cDNA 35 572 ( 538 n); score: 0.862 MATCH C08HBa0235H18.1+ SGN-E213536- 0.862 538 0.825 C PGS_C08HBa0235H18.1+_SGN-E213536- (43244 43781) Alignment (genomic DNA sequence = upper lines): CAAAAAACAA CCTTATAATT TGTACTATCA CTAGGGCAAG CAAATGTGCT AGTAGCATCA 43303 ||||| |||| || |||| || ||||||| || | |||||||| ||||||||| |||| ||| CAAAAGACAA CCNTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT TGTAGGATCG 94 TCTTGTGGGT AGCTATAGGC ATCAGGGCAT CTCTGTTTGA AAAATTTCGA CCACTCAGTA 43363 |||||||||| ||||||| || ||| || ||| || | |||| ||||||| || | |||| ||| TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA CAACTCTGTA 154 GGACTACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT ACAAGGATTG 43423 || | ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT ACAAGGGTTG 214 TTACATCCTC CGGTTACTTT AAGTTGACTA GGGCATTCAC CGTTTATATT GGCGGTGCAT 43483 |||||||||| | | ||| || ||| | | || ||||||| | |||||||| ||| ||||| TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT GGCCGTGCAA 274 TGAATTGAGT GGCATTTTCC TCCACTGGAA TTGGTTGTGG CGAAAGTCAT CGGTATATTA 43543 ||||||| || | |||||||| |||||| | || |||| || | |||||||| || |||||| TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT TGGAATATTA 334 AATCCATCGA CTAAAGAAAT GTCCCAGAAA TCTAGGTTGT TAAACTGGTT CAAGGCGTAT 43603 |||||||||| |||||||||| |||||| ||| |||| |||| ||||||||| ||||||||| AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGCGTAC 394 TCGGTCAAGG TGTTTGGCGG TTTACCCCAC CCGGTACACT GCAAGACTCC ACCACAATCA 43663 |||| | || ||||||| || ||| ||||| |||||||||| | |||||||| |||||||||| TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC ACCACAATCA 454 CCAGTCTCAC AAGAACCTCT ACCAGCACCG TCAAAGTTGC ATTTAGTACG ACCCCATATA 43723 ||||||| || | | |||||| || ||| | | |||||||| | |||||| |||||||||| CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG ACCCCATATA 514 CGTGCCATCT TAGTGCCCCT CAGTGCATTG ATGGTCCAAG TCTGGCCTTG ATTGAGAC 43781 |||||||||| |||| ||||| | | |||||| ||| ||| | | |||||| | |||||||| CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG TTTGGCCTCG ATTGAGAC 572 hqPGS_C08HBa0235H18.1+_SGN-E213536- (43244 43781) ******************************************************************************** EST sequence 704 -strand 703 n (File: SGN-E213606-) 1 ATTTCCAAGG GGAAATTTGG ATCAGCAACA CCATTAGGAC AAAAGACAAC CCTATAGTTT 61 GTACTACCAC CAGGGCAAGT AAATGTGCTT GTAGGATCGT CTTGTGGGTA GCTATAAGCA 121 TCGGGACATC TTTTCTTGAA AAATTTGGAC AACTCTGTAG GGCCACATGG ACCTTGGGTG 181 CAACAATATT GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA 241 AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 301 CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 361 TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT 421 TTGCCCCATC CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG 481 CCTGCAGCAT TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC 541 GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC 601 GATGCCGCCC AAACGGTGTA TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA 661 TAAGTCACAC AAAGAAGGAA GAAGAGAACA AAAGAAGATG TCA Predicted gene structure (within gDNA segment 41119 to 46037): Exon 1 43244 43781 ( 538 n); cDNA 40 577 ( 538 n); score: 0.862 MATCH C08HBa0235H18.1+ SGN-E213606- 0.862 538 0.765 C PGS_C08HBa0235H18.1+_SGN-E213606- (43244 43781) Alignment (genomic DNA sequence = upper lines): CAAAAAACAA CCTTATAATT TGTACTATCA CTAGGGCAAG CAAATGTGCT AGTAGCATCA 43303 ||||| |||| || |||| || ||||||| || | |||||||| ||||||||| |||| ||| CAAAAGACAA CCCTATAGTT TGTACTACCA CCAGGGCAAG TAAATGTGCT TGTAGGATCG 99 TCTTGTGGGT AGCTATAGGC ATCAGGGCAT CTCTGTTTGA AAAATTTCGA CCACTCAGTA 43363 |||||||||| ||||||| || ||| || ||| || | |||| ||||||| || | |||| ||| TCTTGTGGGT AGCTATAAGC ATCGGGACAT CTTTTCTTGA AAAATTTGGA CAACTCTGTA 159 GGACTACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT ACAAGGATTG 43423 || | ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| GGGCCACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT ACAAGGGTTG 219 TTACATCCTC CGGTTACTTT AAGTTGACTA GGGCATTCAC CGTTTATATT GGCGGTGCAT 43483 |||||||||| | | ||| || ||| | | || ||||||| | |||||||| ||| ||||| TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT GGCCGTGCAA 279 TGAATTGAGT GGCATTTTCC TCCACTGGAA TTGGTTGTGG CGAAAGTCAT CGGTATATTA 43543 ||||||| || | |||||||| |||||| | || |||| || | |||||||| || |||||| TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT TGGAATATTA 339 AATCCATCGA CTAAAGAAAT GTCCCAGAAA TCTAGGTTGT TAAACTGGTT CAAGGCGTAT 43603 |||||||||| |||||||||| |||||| ||| |||| |||| ||||||||| ||||||||| AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGCGTAC 399 TCGGTCAAGG TGTTTGGCGG TTTACCCCAC CCGGTACACT GCAAGACTCC ACCACAATCA 43663 |||| | || ||||||| || ||| ||||| |||||||||| | |||||||| |||||||||| TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC ACCACAATCA 459 CCAGTCTCAC AAGAACCTCT ACCAGCACCG TCAAAGTTGC ATTTAGTACG ACCCCATATA 43723 ||||||| || | | |||||| || ||| | | |||||||| | |||||| |||||||||| CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG ACCCCATATA 519 CGTGCCATCT TAGTGCCCCT CAGTGCATTG ATGGTCCAAG TCTGGCCTTG ATTGAGAC 43781 |||||||||| |||| ||||| | | |||||| ||| ||| | | |||||| | |||||||| CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG TTTGGCCTCG ATTGAGAC 577 hqPGS_C08HBa0235H18.1+_SGN-E213606- (43244 43781) ******************************************************************************** EST sequence 658 -strand 511 n (File: SGN-E204787-) 1 TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 61 TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 121 CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 181 GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 241 ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 301 AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT 361 TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG 421 TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG 481 TTCCCCTCGG AGCATTGATG ACCCATGTTT G Predicted gene structure (within gDNA segment 41639 to 44637): Exon 1 43257 43767 ( 511 n); cDNA 1 511 ( 511 n); score: 0.861 MATCH C08HBa0235H18.1+ SGN-E204787- 0.861 511 1.000 C PGS_C08HBa0235H18.1+_SGN-E204787- (43257 43767) Alignment (genomic DNA sequence = upper lines): TATAATTTGT ACTATCACTA GGGCAAGCAA ATGTGCTAGT AGCATCATCT TGTGGGTAGC 43316 |||| ||||| |||| ||| | ||||||| || ||||||| || || ||| ||| |||||||||| TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 60 TATAGGCATC AGGGCATCTC TGTTTGAAAA ATTTCGACCA CTCAGTAGGA CTACATGGAC 43376 |||| ||||| || ||||| | ||||||| |||| ||| | ||| ||||| | |||||||| TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 120 CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGATTGTTA CATCCTCCGG 43436 |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| |||||||| | CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 180 TTACTTTAAG TTGACTAGGG CATTCACCGT TTATATTGGC GGTGCATTGA ATTGAGTGGC 43496 ||| ||||| | ||| |||||||| | |||||||||| ||||| ||| |||| ||| | GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 240 ATTTTCCTCC ACTGGAATTG GTTGTGGCGA AAGTCATCGG TATATTAAAT CCATCGACTA 43556 |||||||||| ||| | || |||| ||| | ||||||| || ||||||||| |||||||||| ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 300 AAGAAATGTC CCAGAAATCT AGGTTGTTAA ACTGGTTCAA GGCGTATTCG GTCAAGGTGT 43616 |||||||||| ||| |||||| | |||| ||| |||||| ||| |||||| ||| | | ||||| AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT 360 TTGGCGGTTT ACCCCACCCG GTACACTGCA AGACTCCACC ACAATCACCA GTCTCACAAG 43676 |||| ||||| ||||| ||| |||||||| | |||||||||| |||||||||| |||| ||| | TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG 420 AACCTCTACC AGCACCGTCA AAGTTGCATT TAGTACGACC CCATATACGT GCCATCTTAG 43736 |||||| || ||| | | | |||||||| ||||||||| |||||||||| |||||||||| TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG 480 TGCCCCTCAG TGCATTGATG GTCCAAGTCT G 43767 | |||||| | ||||||||| ||| || | | TTCCCCTCGG AGCATTGATG ACCCATGTTT G 511 hqPGS_C08HBa0235H18.1+_SGN-E204787- (43257 43767) ******************************************************************************** EST sequence 881 -strand 499 n (File: SGN-E200099-) 1 TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 61 TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 121 CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 181 GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 241 ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 301 AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT 361 TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG 421 TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG 481 TTCCCCTCGG AGCATTGAT Predicted gene structure (within gDNA segment 41639 to 44517): Exon 1 43257 43755 ( 499 n); cDNA 1 499 ( 499 n); score: 0.866 MATCH C08HBa0235H18.1+ SGN-E200099- 0.866 499 1.000 C PGS_C08HBa0235H18.1+_SGN-E200099- (43257 43755) Alignment (genomic DNA sequence = upper lines): TATAATTTGT ACTATCACTA GGGCAAGCAA ATGTGCTAGT AGCATCATCT TGTGGGTAGC 43316 |||| ||||| |||| ||| | ||||||| || ||||||| || || ||| ||| |||||||||| TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 60 TATAGGCATC AGGGCATCTC TGTTTGAAAA ATTTCGACCA CTCAGTAGGA CTACATGGAC 43376 |||| ||||| || ||||| | ||||||| |||| ||| | ||| ||||| | |||||||| TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 120 CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGATTGTTA CATCCTCCGG 43436 |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| |||||||| | CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 180 TTACTTTAAG TTGACTAGGG CATTCACCGT TTATATTGGC GGTGCATTGA ATTGAGTGGC 43496 ||| ||||| | ||| |||||||| | |||||||||| ||||| ||| |||| ||| | GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 240 ATTTTCCTCC ACTGGAATTG GTTGTGGCGA AAGTCATCGG TATATTAAAT CCATCGACTA 43556 |||||||||| ||| | || |||| ||| | ||||||| || ||||||||| |||||||||| ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 300 AAGAAATGTC CCAGAAATCT AGGTTGTTAA ACTGGTTCAA GGCGTATTCG GTCAAGGTGT 43616 |||||||||| ||| |||||| | |||| ||| |||||| ||| |||||| ||| | | ||||| AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT 360 TTGGCGGTTT ACCCCACCCG GTACACTGCA AGACTCCACC ACAATCACCA GTCTCACAAG 43676 |||| ||||| ||||| ||| |||||||| | |||||||||| |||||||||| |||| ||| | TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG 420 AACCTCTACC AGCACCGTCA AAGTTGCATT TAGTACGACC CCATATACGT GCCATCTTAG 43736 |||||| || ||| | | | |||||||| ||||||||| |||||||||| |||||||||| TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG 480 TGCCCCTCAG TGCATTGAT 43755 | |||||| | |||||||| TTCCCCTCGG AGCATTGAT 499 hqPGS_C08HBa0235H18.1+_SGN-E200099- (43257 43755) ******************************************************************************** EST sequence 1165 -strand 415 n (File: SGN-E275197-) 1 TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 61 TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 121 CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 181 GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 241 ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 301 AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT 361 TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA GTCTG Predicted gene structure (within gDNA segment 41639 to 45189): Exon 1 43257 43670 ( 414 n); cDNA 1 414 ( 414 n); score: 0.872 MATCH C08HBa0235H18.1+ SGN-E275197- 0.872 414 0.998 C PGS_C08HBa0235H18.1+_SGN-E275197- (43257 43670) Alignment (genomic DNA sequence = upper lines): TATAATTTGT ACTATCACTA GGGCAAGCAA ATGTGCTAGT AGCATCATCT TGTGGGTAGC 43316 |||| ||||| |||| ||| | ||||||| || ||||||| || || ||| ||| |||||||||| TATAGTTTGT ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC 60 TATAGGCATC AGGGCATCTC TGTTTGAAAA ATTTCGACCA CTCAGTAGGA CTACATGGAC 43376 |||| ||||| || ||||| | ||||||| |||| ||| | ||| ||||| | |||||||| TATAAGCATC GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC 120 CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGATTGTTA CATCCTCCGG 43436 |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| |||||||| | CTTGGGTGCA ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG 180 TTACTTTAAG TTGACTAGGG CATTCACCGT TTATATTGGC GGTGCATTGA ATTGAGTGGC 43496 ||| ||||| | ||| |||||||| | |||||||||| ||||| ||| |||| ||| | GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC 240 ATTTTCCTCC ACTGGAATTG GTTGTGGCGA AAGTCATCGG TATATTAAAT CCATCGACTA 43556 |||||||||| ||| | || |||| ||| | ||||||| || ||||||||| |||||||||| ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA 300 AAGAAATGTC CCAGAAATCT AGGTTGTTAA ACTGGTTCAA GGCGTATTCG GTCAAGGTGT 43616 |||||||||| ||| |||||| | |||| ||| |||||| ||| |||||| ||| | | ||||| AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT 360 TTGGCGGTTT ACCCCACCCG GTACACTGCA AGACTCCACC ACAATCACCA GTCT 43670 |||| ||||| ||||| ||| |||||||| | |||||||||| |||||||||| |||| TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC ACAATCACCA GTCT 414 hqPGS_C08HBa0235H18.1+_SGN-E275197- (43257 43670) ******************************************************************************** EST sequence 681 -strand 597 n (File: SGN-E253886-) 1 ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT 61 ATAAGCATCG GGACATCTTT TCTTGAAGAA TTTGCACAAC TCTGTAGGGC CACATGGACC 121 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 181 TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 241 TTTTCCTCCA TTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 301 AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 361 TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT 421 ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATATTAGT 481 TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT 541 CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGC Predicted gene structure (within gDNA segment 41649 to 47019): Exon 1 43258 43781 ( 524 n); cDNA 1 524 ( 524 n); score: 0.855 MATCH C08HBa0235H18.1+ SGN-E253886- 0.855 524 0.878 C PGS_C08HBa0235H18.1+_SGN-E253886- (43258 43781) Alignment (genomic DNA sequence = upper lines): ATAATTTGTA CTATCACTAG GGCAAGCAAA TGTGCTAGTA GCATCATCTT GTGGGTAGCT 43317 ||| |||||| ||| ||| || |||||| ||| |||||| ||| | ||| |||| |||||||||| ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT 60 ATAGGCATCA GGGCATCTCT GTTTGAAAAA TTTCGACCAC TCAGTAGGAC TACATGGACC 43377 ||| ||||| || ||||| | ||||| || ||| || || || ||||| | ||||||||| ATAAGCATCG GGACATCTTT TCTTGAAGAA TTTGCACAAC TCTGTAGGGC CACATGGACC 120 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGATTGTTAC ATCCTCCGGT 43437 |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| ||||||| | TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 180 TACTTTAAGT TGACTAGGGC ATTCACCGTT TATATTGGCG GTGCATTGAA TTGAGTGGCA 43497 ||| ||||| | ||| | ||||||| || ||||||||| ||||| |||| ||| ||| || TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 240 TTTTCCTCCA CTGGAATTGG TTGTGGCGAA AGTCATCGGT ATATTAAATC CATCGACTAA 43557 |||||||||| | | || | ||| ||| || |||||| || |||||||||| |||||||||| TTTTCCTCCA TTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 300 AGAAATGTCC CAGAAATCTA GGTTGTTAAA CTGGTTCAAG GCGTATTCGG TCAAGGTGTT 43617 |||||||||| || ||||||| |||| |||| ||||| |||| ||||| |||| | |||||| AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 360 TGGCGGTTTA CCCCACCCGG TACACTGCAA GACTCCACCA CAATCACCAG TCTCACAAGA 43677 ||| ||||| ||||| |||| ||||||| || |||||||||| |||||||||| ||| ||| | TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT 420 ACCTCTACCA GCACCGTCAA AGTTGCATTT AGTACGACCC CATATACGTG CCATCTTAGT 43737 |||||| || ||| | | || ||||||| |||||||||| |||||||||| |||| ||||| ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATATTAGT 480 GCCCCTCAGT GCATTGATGG TCCAAGTCTG GCCTTGATTG AGAC 43781 |||||| | ||||||||| ||| || || |||| ||||| |||| TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG AGAC 524 hqPGS_C08HBa0235H18.1+_SGN-E253886- (43258 43781) ******************************************************************************** EST sequence 796 -strand 415 n (File: SGN-E206043-) 1 ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT 61 ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 121 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 181 TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 241 TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ACCAAGNAAN TATTAAATCC 301 ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 361 TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCA Predicted gene structure (within gDNA segment 41649 to 45109): Exon 1 43258 43663 ( 406 n); cDNA 1 415 ( 415 n); score: 0.814 MATCH C08HBa0235H18.1+ SGN-E206043- 0.814 406 0.978 C PGS_C08HBa0235H18.1+_SGN-E206043- (43258 43663) Alignment (genomic DNA sequence = upper lines): ATAATTTGTA CTATCACTAG GGCAAGCAAA TGTGCTAGTA GCATCATCTT GTGGGTAGCT 43317 ||| |||||| ||| ||| || |||||| ||| |||||| ||| | ||| |||| |||||||||| ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT 60 ATAGGCATCA GGGCATCTCT GTTTGAAAAA TTTCGACCAC TCAGTAGGAC TACATGGACC 43377 ||| ||||| || ||||| | |||||||| ||| ||| || || ||||| | ||||||||| ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 120 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGATTGTTAC ATCCTCCGGT 43437 |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| ||||||| | TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 180 TACTTTAAGT TGACTAGGGC ATTCACCGTT TATATTGGCG GTGCATTGAA TTGAGTGGCA 43497 ||| ||||| | ||| | ||||||| || ||||||||| ||||| |||| ||| ||| || TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 240 TTTTCCTCCA CTGGAATTGG TTGTGGCGAA AGTCA-T--- --C--GGTA- TATTAAATCC 43548 |||||||||| || | || | ||| ||| || ||||| | | | | |||||||||| TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ACCAAGNAAN TATTAAATCC 300 ATCGACTAAA GAAATGTCCC AGAAATCTAG GTTGTTAAAC TGGTTCAAGG CGTATTCGGT 43608 |||||||||| |||||||||| | ||||||| |||| ||||| |||| ||||| |||| |||| ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 360 CAAGGTGTTT GGCGGTTTAC CCCACCCGGT ACACTGCAAG ACTCCACCAC AATCA 43663 | ||||||| || ||||| | |||| ||||| |||||| ||| |||||||||| ||||| TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCA 415 hqPGS_C08HBa0235H18.1+_SGN-E206043- (43258 43663) ******************************************************************************** EST sequence 998 -strand 327 n (File: SGN-E207626-) 1 ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT 61 ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 121 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 181 TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 241 TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 301 AGAAATGTCC CAAAAATCTA AGTTGCT Predicted gene structure (within gDNA segment 41649 to 44319): Exon 1 43258 43582 ( 325 n); cDNA 1 325 ( 325 n); score: 0.868 MATCH C08HBa0235H18.1+ SGN-E207626- 0.868 325 0.994 C PGS_C08HBa0235H18.1+_SGN-E207626- (43258 43582) Alignment (genomic DNA sequence = upper lines): ATAATTTGTA CTATCACTAG GGCAAGCAAA TGTGCTAGTA GCATCATCTT GTGGGTAGCT 43317 ||| |||||| ||| ||| || |||||| ||| |||||| ||| | ||| |||| |||||||||| ATAGTTTGTA CTACCACCAG GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT 60 ATAGGCATCA GGGCATCTCT GTTTGAAAAA TTTCGACCAC TCAGTAGGAC TACATGGACC 43377 ||| ||||| || ||||| | |||||||| ||| ||| || || ||||| | ||||||||| ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 120 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGATTGTTAC ATCCTCCGGT 43437 |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| ||||||| | TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 180 TACTTTAAGT TGACTAGGGC ATTCACCGTT TATATTGGCG GTGCATTGAA TTGAGTGGCA 43497 ||| ||||| | ||| | ||||||| || ||||||||| ||||| |||| ||| ||| || TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 240 TTTTCCTCCA CTGGAATTGG TTGTGGCGAA AGTCATCGGT ATATTAAATC CATCGACTAA 43557 |||||||||| || | || | ||| ||| || |||||| || |||||||||| |||||||||| TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 300 AGAAATGTCC CAGAAATCTA GGTTG 43582 |||||||||| || ||||||| |||| AGAAATGTCC CAAAAATCTA AGTTG 325 hqPGS_C08HBa0235H18.1+_SGN-E207626- (43258 43582) ******************************************************************************** EST sequence 599 -strand 598 n (File: SGN-E253452-) 1 TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA 61 TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT 121 TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 181 ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 241 TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 301 GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 361 GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 421 CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 481 CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 541 GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT AGTGGCAG Predicted gene structure (within gDNA segment 41659 to 45527): Exon 1 43259 43781 ( 523 n); cDNA 1 523 ( 523 n); score: 0.862 MATCH C08HBa0235H18.1+ SGN-E253452- 0.862 523 0.875 C PGS_C08HBa0235H18.1+_SGN-E253452- (43259 43781) Alignment (genomic DNA sequence = upper lines): TAATTTGTAC TATCACTAGG GCAAGCAAAT GTGCTAGTAG CATCATCTTG TGGGTAGCTA 43318 || ||||||| || ||| ||| ||||| |||| ||||| |||| ||| ||||| |||||||||| TAGTTTGTAC TACCACCAGG GCAAGTAAAT GTGCTTGTAG GATCGTCTTG TGGGTAGCTA 60 TAGGCATCAG GGCATCTCTG TTTGAAAAAT TTCGACCACT CAGTAGGACT ACATGGACCT 43378 || ||||| | | ||||| | ||||||||| || ||| ||| | ||||| | |||||||||| TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT 120 TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GATTGTTACA TCCTCCGGTT 43438 |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| |||||| | | TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 180 ACTTTAAGTT GACTAGGGCA TTCACCGTTT ATATTGGCGG TGCATTGAAT TGAGTGGCAT 43498 || ||||| | ||| || |||||| ||| |||||||| | |||| ||||| || ||| ||| ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 240 TTTCCTCCAC TGGAATTGGT TGTGGCGAAA GTCATCGGTA TATTAAATCC ATCGACTAAA 43558 |||||||||| | | || || || ||| ||| ||||| || | |||||||||| |||||||||| TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 300 GAAATGTCCC AGAAATCTAG GTTGTTAAAC TGGTTCAAGG CGTATTCGGT CAAGGTGTTT 43618 |||||||||| | ||||||| |||| ||||| |||| ||||| |||| |||| | ||||||| GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 360 GGCGGTTTAC CCCACCCGGT ACACTGCAAG ACTCCACCAC AATCACCAGT CTCACAAGAA 43678 || ||||| | |||| ||||| |||||| ||| |||||||||| |||||||||| || ||| | | GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 420 CCTCTACCAG CACCGTCAAA GTTGCATTTA GTACGACCCC ATATACGTGC CATCTTAGTG 43738 ||||| || | || | | ||| |||||| | |||||||||| |||||||||| ||||||||| CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 480 CCCCTCAGTG CATTGATGGT CCAAGTCTGG CCTTGATTGA GAC 43781 |||||| | | |||||||| ||| || ||| ||| |||||| ||| CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GAC 523 hqPGS_C08HBa0235H18.1+_SGN-E253452- (43259 43781) ******************************************************************************** EST sequence 1130 -strand 645 n (File: SGN-E209968-) 1 AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT 61 AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 121 GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 181 CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 241 TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 301 AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 361 GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 421 CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 481 CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 541 GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT 601 AAGTATAAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA AGATG Predicted gene structure (within gDNA segment 41669 to 46007): Exon 1 43262 43781 ( 520 n); cDNA 3 522 ( 520 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E209968- 0.863 520 0.806 C PGS_C08HBa0235H18.1+_SGN-E209968- (43262 43781) Alignment (genomic DNA sequence = upper lines): TTTGTACTAT CACTAGGGCA AGCAAATGTG CTAGTAGCAT CATCTTGTGG GTAGCTATAG 43321 ||||||||| ||| |||||| || ||||||| || |||| || | |||||||| ||||||||| TTTGTACTAC CACCAGGGCA AGTAAATGTG CTTGTAGGAT CGTCTTGTGG GTAGCTATAA 62 GCATCAGGGC ATCTCTGTTT GAAAAATTTC GACCACTCAG TAGGACTACA TGGACCTTGG 43381 ||||| || | |||| | || ||||||||| ||| |||| | |||| | ||| |||||||||| GCATCGGGAC ATCTTTTCTT GAAAAATTTG GACAACTCTG TAGGGCCACA TGGACCTTGG 122 GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGAT TGTTACATCC TCCGGTTACT 43441 |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| ||| | ||| GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC 182 TTAAGTTGAC TAGGGCATTC ACCGTTTATA TTGGCGGTGC ATTGAATTGA GTGGCATTTT 43501 ||||| | ||| ||||| ||| |||||| ||||| |||| | ||||||| ||| |||||| TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT 242 CCTCCACTGG AATTGGTTGT GGCGAAAGTC ATCGGTATAT TAAATCCATC GACTAAAGAA 43561 |||||||| | || |||| ||| |||||| || || |||| |||||||||| |||||||||| CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 302 ATGTCCCAGA AATCTAGGTT GTTAAACTGG TTCAAGGCGT ATTCGGTCAA GGTGTTTGGC 43621 |||||||| | |||||| ||| | |||||||| | |||||||| | |||| | ||||||||| ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG 362 GGTTTACCCC ACCCGGTACA CTGCAAGACT CCACCACAAT CACCAGTCTC ACAAGAACCT 43681 ||||| |||| | |||||||| ||| |||||| |||||||||| ||||||||| ||| | |||| GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT 422 CTACCAGCAC CGTCAAAGTT GCATTTAGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC 43741 || || ||| | | |||||| ||| |||| |||||||||| |||||||||| |||||| ||| CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC 482 CTCAGTGCAT TGATGGTCCA AGTCTGGCCT TGATTGAGAC 43781 ||| | |||| ||||| ||| || |||||| ||||||||| CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC 522 hqPGS_C08HBa0235H18.1+_SGN-E209968- (43262 43781) ******************************************************************************** EST sequence 970 -strand 645 n (File: SGN-E276677-) 1 AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT 61 AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 121 GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 181 CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 241 TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 301 AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 361 GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 421 CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 481 CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 541 GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT 601 AAGTATAAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA AGATG Predicted gene structure (within gDNA segment 41669 to 46007): Exon 1 43262 43781 ( 520 n); cDNA 3 522 ( 520 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E276677- 0.863 520 0.806 C PGS_C08HBa0235H18.1+_SGN-E276677- (43262 43781) Alignment (genomic DNA sequence = upper lines): TTTGTACTAT CACTAGGGCA AGCAAATGTG CTAGTAGCAT CATCTTGTGG GTAGCTATAG 43321 ||||||||| ||| |||||| || ||||||| || |||| || | |||||||| ||||||||| TTTGTACTAC CACCAGGGCA AGTAAATGTG CTTGTAGGAT CGTCTTGTGG GTAGCTATAA 62 GCATCAGGGC ATCTCTGTTT GAAAAATTTC GACCACTCAG TAGGACTACA TGGACCTTGG 43381 ||||| || | |||| | || ||||||||| ||| |||| | |||| | ||| |||||||||| GCATCGGGAC ATCTTTTCTT GAAAAATTTG GACAACTCTG TAGGGCCACA TGGACCTTGG 122 GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGAT TGTTACATCC TCCGGTTACT 43441 |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| ||| | ||| GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC 182 TTAAGTTGAC TAGGGCATTC ACCGTTTATA TTGGCGGTGC ATTGAATTGA GTGGCATTTT 43501 ||||| | ||| ||||| ||| |||||| ||||| |||| | ||||||| ||| |||||| TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT 242 CCTCCACTGG AATTGGTTGT GGCGAAAGTC ATCGGTATAT TAAATCCATC GACTAAAGAA 43561 |||||||| | || |||| ||| |||||| || || |||| |||||||||| |||||||||| CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 302 ATGTCCCAGA AATCTAGGTT GTTAAACTGG TTCAAGGCGT ATTCGGTCAA GGTGTTTGGC 43621 |||||||| | |||||| ||| | |||||||| | |||||||| | |||| | ||||||||| ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG 362 GGTTTACCCC ACCCGGTACA CTGCAAGACT CCACCACAAT CACCAGTCTC ACAAGAACCT 43681 ||||| |||| | |||||||| ||| |||||| |||||||||| ||||||||| ||| | |||| GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT 422 CTACCAGCAC CGTCAAAGTT GCATTTAGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC 43741 || || ||| | | |||||| ||| |||| |||||||||| |||||||||| |||||| ||| CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC 482 CTCAGTGCAT TGATGGTCCA AGTCTGGCCT TGATTGAGAC 43781 ||| | |||| ||||| ||| || |||||| ||||||||| CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC 522 hqPGS_C08HBa0235H18.1+_SGN-E276677- (43262 43781) ******************************************************************************** EST sequence 672 -strand 595 n (File: SGN-E254383-) 1 AGTTTGTACT ACCACCAGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT 61 AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT 121 GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 181 CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 241 TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 301 AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 361 GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 421 CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 481 CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 541 GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGC Predicted gene structure (within gDNA segment 41669 to 45507): Exon 1 43262 43781 ( 520 n); cDNA 3 522 ( 520 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E254383- 0.863 520 0.874 C PGS_C08HBa0235H18.1+_SGN-E254383- (43262 43781) Alignment (genomic DNA sequence = upper lines): TTTGTACTAT CACTAGGGCA AGCAAATGTG CTAGTAGCAT CATCTTGTGG GTAGCTATAG 43321 ||||||||| ||| |||||| || ||||||| || |||| || | |||||||| ||||||||| TTTGTACTAC CACCAGGGCA AGTAAATGTG CTTGTAGGAT CGTCTTGTGG GTAGCTATAA 62 GCATCAGGGC ATCTCTGTTT GAAAAATTTC GACCACTCAG TAGGACTACA TGGACCTTGG 43381 ||||| || | |||| | || ||||||||| ||| |||| | |||| | ||| |||||||||| GCATCGGGAC ATCTTTTCTT GAAAAATTTG GACAACTCTG TAGGGCCACA TGGACCTTGG 122 GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGAT TGTTACATCC TCCGGTTACT 43441 |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| ||| | ||| GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC 182 TTAAGTTGAC TAGGGCATTC ACCGTTTATA TTGGCGGTGC ATTGAATTGA GTGGCATTTT 43501 ||||| | ||| ||||| ||| |||||| ||||| |||| | ||||||| ||| |||||| TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT 242 CCTCCACTGG AATTGGTTGT GGCGAAAGTC ATCGGTATAT TAAATCCATC GACTAAAGAA 43561 |||||||| | || |||| ||| |||||| || || |||| |||||||||| |||||||||| CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 302 ATGTCCCAGA AATCTAGGTT GTTAAACTGG TTCAAGGCGT ATTCGGTCAA GGTGTTTGGC 43621 |||||||| | |||||| ||| | |||||||| | |||||||| | |||| | ||||||||| ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG 362 GGTTTACCCC ACCCGGTACA CTGCAAGACT CCACCACAAT CACCAGTCTC ACAAGAACCT 43681 ||||| |||| | |||||||| ||| |||||| |||||||||| ||||||||| ||| | |||| GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT 422 CTACCAGCAC CGTCAAAGTT GCATTTAGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC 43741 || || ||| | | |||||| ||| |||| |||||||||| |||||||||| |||||| ||| CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC 482 CTCAGTGCAT TGATGGTCCA AGTCTGGCCT TGATTGAGAC 43781 ||| | |||| ||||| ||| || |||||| ||||||||| CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC 522 hqPGS_C08HBa0235H18.1+_SGN-E254383- (43262 43781) ******************************************************************************** EST sequence 636 -strand 602 n (File: SGN-E303865-) 1 ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC 61 GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA 121 ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GNTACCTTAA 181 GGGCGCGAGG ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC 241 CACTAGGTTT TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT 301 CCCAAAAATC TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT 361 TGCCCCATCC GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC 421 CTGCAGCATT AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG 481 GAGCATTGAT GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG 541 ATGCCGCCCA AACGGTGTAT GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAAGTAT 601 AA Predicted gene structure (within gDNA segment 41739 to 45637): Exon 1 43267 43781 ( 515 n); cDNA 1 516 ( 516 n); score: 0.859 MATCH C08HBa0235H18.1+ SGN-E303865- 0.859 515 0.855 C PGS_C08HBa0235H18.1+_SGN-E303865- (43267 43781) Alignment (genomic DNA sequence = upper lines): ACTATCACTA GGGCAAGCAA ATGTGCTAGT AGCATCATCT TGTGGGTAGC TATAGGCATC 43326 |||| ||| | ||||||| || ||||||| || || ||| ||| |||||||||| |||| ||||| ACTACCACCA GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC 60 AGGGCATCTC TGTTTGAAAA ATTTCGACCA CTCAGTAGGA CTACATGGAC CTTGGGTGCA 43386 || ||||| | ||||||| |||| ||| | ||| ||||| | |||||||| |||||||||| GGGACATCTT TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA 120 ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGATTGTTA CATCCTCC-G GTTACTTTAA 43445 |||||||||| |||||||||| |||||||||| ||| |||||| |||||||| | | ||| |||| ACAATATTGT TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GNTACCTTAA 180 GTTGACTAGG GCATTCACCG TTTATATTGG CGGTGCATTG AATTGAGTGG CATTTTCCTC 43505 | | ||| |||||||| |||||||||| | ||||| || ||||| ||| |||||||||| GGGCGCGAGG ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC 240 CACTGGAATT GGTTGTGGCG AAAGTCATCG GTATATTAAA TCCATCGACT AAAGAAATGT 43565 |||| | || |||| ||| |||||||| | | |||||||| |||||||||| |||||||||| CACTAGGTTT TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT 300 CCCAGAAATC TAGGTTGTTA AACTGGTTCA AGGCGTATTC GGTCAAGGTG TTTGGCGGTT 43625 |||| ||||| || |||| || ||||||| || ||||||| || || | |||| ||||| |||| CCCAAAAATC TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT 360 TACCCCACCC GGTACACTGC AAGACTCCAC CACAATCACC AGTCTCACAA GAACCTCTAC 43685 | ||||| || ||||||||| |||||||||| |||||||||| ||||| ||| | |||||| | TGCCCCATCC GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC 420 CAGCACCGTC AAAGTTGCAT TTAGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCA 43745 | ||| | | ||||||||| |||||||| |||||||||| |||||||||| || |||||| CTGCAGCATT AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG 480 GTGCATTGAT GGTCCAAGTC TGGCCTTGAT TGAGAC 43781 | |||||||| | ||| || |||||| ||| |||||| GAGCATTGAT GACCCATGTT TGGCCTCGAT TGAGAC 516 hqPGS_C08HBa0235H18.1+_SGN-E303865- (43267 43781) ******************************************************************************** EST sequence 1224 -strand 646 n (File: SGN-E294134-) 1 AGGGCAAGTA AATGTGCTAG TAGGATCATC TTGTGGGTAG CTATACGCAT CAGGACATCT 61 TTGTTTGAAA AATCTCGCCA AATCAGTAGG GCCACATGGA CCTTGTGTGC AACAATATTG 121 TTGTCCTCCG AACGTGGTAC AAGGATTGTT ACATCCTCCG GGTACCCTAA GTGAACCAGG 181 ACATTCACCA TTTATATTAG CCGTACAATG AATTGCATGG CATTTCCCTC CACTAGGATT 241 GGTCGGGGCG AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC 301 TAGGTTGCTA AACTGGTCCA AGGCGTACTC GGCCAGGGTG TTTGGTGGTT TGCCCCACCC 361 GGTACATTGC AAGACCCCAC CACAATCACC AGTCTGACAT GAACCTCTAC CAGCACCATC 421 AAAGTTGCAA TTCGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GTGCATTGAT 481 GACCCATGTT TGGCCTCGAT CAAGACGTCG ACCACCGCCT ATTGGGGTCG ACGCCGCCCA 541 GACGGTGTAT GGACAGTTGT TGCGTACCTC GAAAGTGGCA GCATAAGTGT AAGTCACAAA 601 AGCAAGAAGG AAGAAAACAA AAGAAGATCT CAAGTAGGCC ATGTTT Predicted gene structure (within gDNA segment 41712 to 46114): Exon 1 43276 43781 ( 506 n); cDNA 1 506 ( 506 n); score: 0.889 MATCH C08HBa0235H18.1+ SGN-E294134- 0.889 506 0.783 C PGS_C08HBa0235H18.1+_SGN-E294134- (43276 43781) Alignment (genomic DNA sequence = upper lines): AGGGCAAGCA AATGTGCTAG TAGCATCATC TTGTGGGTAG CTATAGGCAT CAGGGCATCT 43335 |||||||| | |||||||||| ||| |||||| |||||||||| ||||| |||| |||| ||||| AGGGCAAGTA AATGTGCTAG TAGGATCATC TTGTGGGTAG CTATACGCAT CAGGACATCT 60 CTGTTTGAAA AATTTCGACC ACTCAGTAGG ACTACATGGA CCTTGGGTGC AACAATATTG 43395 ||||||||| ||| ||| | | |||||||| | ||||||| ||||| |||| |||||||||| TTGTTTGAAA AATCTCGCCA AATCAGTAGG GCCACATGGA CCTTGTGTGC AACAATATTG 120 TTGTCCTCCA AACGTGGTAC AAGGATTGTT ACATCCTCCG GTTACTTTAA GTTGACTAGG 43455 ||||||||| |||||||||| |||||||||| |||||||||| | ||| ||| || || ||| TTGTCCTCCG AACGTGGTAC AAGGATTGTT ACATCCTCCG GGTACCCTAA GTGAACCAGG 180 GCATTCACCG TTTATATTGG CGGTGCATTG AATTGAGTGG CATTTTCCTC CACTGGAATT 43515 |||||||| |||||||| | | || || || ||||| ||| ||||| |||| |||| | ||| ACATTCACCA TTTATATTAG CCGTACAATG AATTGCATGG CATTTCCCTC CACTAGGATT 240 GGTTGTGGCG AAAGTCATCG GTATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC 43575 ||| | |||| |||||||| | | |||||||| |||||||||| |||||||||| |||||||||| GGTCGGGGCG AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC 300 TAGGTTGTTA AACTGGTTCA AGGCGTATTC GGTCAAGGTG TTTGGCGGTT TACCCCACCC 43635 ||||||| || ||||||| || ||||||| || || || |||| ||||| |||| | |||||||| TAGGTTGCTA AACTGGTCCA AGGCGTACTC GGCCAGGGTG TTTGGTGGTT TGCCCCACCC 360 GGTACACTGC AAGACTCCAC CACAATCACC AGTCTCACAA GAACCTCTAC CAGCACCGTC 43695 |||||| ||| ||||| |||| |||||||||| ||||| ||| |||||||||| ||||||| || GGTACATTGC AAGACCCCAC CACAATCACC AGTCTGACAT GAACCTCTAC CAGCACCATC 420 AAAGTTGCAT TTAGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCA GTGCATTGAT 43755 ||||||||| || ||||||| |||||||||| |||||||||| ||||||||| |||||||||| AAAGTTGCAA TTCGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GTGCATTGAT 480 GGTCCAAGTC TGGCCTTGAT TGAGAC 43781 | ||| || |||||| ||| |||| GACCCATGTT TGGCCTCGAT CAAGAC 506 hqPGS_C08HBa0235H18.1+_SGN-E294134- (43276 43781) ******************************************************************************** EST sequence 589 -strand 632 n (File: SGN-E302616-) 1 AGGGCAAGTA AATGTGCTAG TAGGATCATC CTGTGGGTAG CTATACGCAT CAGGACATCT 61 CTGTTTGCAC AATCCCGACA AATCAGTAGG GCCACATGGA CCTTGTGTGC AACAATATTG 121 TTGTCCTCCG AACGTGGTAC AAGGATTGTT ACATCCTCCG GGTACCCTAA GTGAACCAGG 181 ACATTCACCA TTTATATTAG CCGTACAATG AATTGCATGG CATTTCCCTC CACTAGGATT 241 GGTCGGGGCG AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC 301 TAGGTTGCTA AACTGGTCCA AGGCGTACTC GGCCAGGGTG TTTGGTGGTT TGCCCCACCC 361 GGTACATTGC AAGACCCCAC CACAATCACC AGTCTGACAT GAACCTCTAC CAGCACCATC 421 AAAGTTGCAA TTCGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GTGCATTGAT 481 GACCCATGTT TGGCCTCGAT CAAGACGTCG ACCACCGCCT ATTGGGGTCG ACGCCGCCCA 541 GACGGTGTAT GGACAGTTGT TGCGTACCTC GAAAGTGGCA GCATAAGTGT AAGTCACAAA 601 AGCAAGAAGG AAGAAAACAA AAGAAGATCT CA Predicted gene structure (within gDNA segment 41712 to 45974): Exon 1 43276 43781 ( 506 n); cDNA 1 506 ( 506 n); score: 0.885 MATCH C08HBa0235H18.1+ SGN-E302616- 0.885 506 0.801 C PGS_C08HBa0235H18.1+_SGN-E302616- (43276 43781) Alignment (genomic DNA sequence = upper lines): AGGGCAAGCA AATGTGCTAG TAGCATCATC TTGTGGGTAG CTATAGGCAT CAGGGCATCT 43335 |||||||| | |||||||||| ||| |||||| ||||||||| ||||| |||| |||| ||||| AGGGCAAGTA AATGTGCTAG TAGGATCATC CTGTGGGTAG CTATACGCAT CAGGACATCT 60 CTGTTTGAAA AATTTCGACC ACTCAGTAGG ACTACATGGA CCTTGGGTGC AACAATATTG 43395 ||||||| | ||| |||| | |||||||| | ||||||| ||||| |||| |||||||||| CTGTTTGCAC AATCCCGACA AATCAGTAGG GCCACATGGA CCTTGTGTGC AACAATATTG 120 TTGTCCTCCA AACGTGGTAC AAGGATTGTT ACATCCTCCG GTTACTTTAA GTTGACTAGG 43455 ||||||||| |||||||||| |||||||||| |||||||||| | ||| ||| || || ||| TTGTCCTCCG AACGTGGTAC AAGGATTGTT ACATCCTCCG GGTACCCTAA GTGAACCAGG 180 GCATTCACCG TTTATATTGG CGGTGCATTG AATTGAGTGG CATTTTCCTC CACTGGAATT 43515 |||||||| |||||||| | | || || || ||||| ||| ||||| |||| |||| | ||| ACATTCACCA TTTATATTAG CCGTACAATG AATTGCATGG CATTTCCCTC CACTAGGATT 240 GGTTGTGGCG AAAGTCATCG GTATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC 43575 ||| | |||| |||||||| | | |||||||| |||||||||| |||||||||| |||||||||| GGTCGGGGCG AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC 300 TAGGTTGTTA AACTGGTTCA AGGCGTATTC GGTCAAGGTG TTTGGCGGTT TACCCCACCC 43635 ||||||| || ||||||| || ||||||| || || || |||| ||||| |||| | |||||||| TAGGTTGCTA AACTGGTCCA AGGCGTACTC GGCCAGGGTG TTTGGTGGTT TGCCCCACCC 360 GGTACACTGC AAGACTCCAC CACAATCACC AGTCTCACAA GAACCTCTAC CAGCACCGTC 43695 |||||| ||| ||||| |||| |||||||||| ||||| ||| |||||||||| ||||||| || GGTACATTGC AAGACCCCAC CACAATCACC AGTCTGACAT GAACCTCTAC CAGCACCATC 420 AAAGTTGCAT TTAGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCA GTGCATTGAT 43755 ||||||||| || ||||||| |||||||||| |||||||||| ||||||||| |||||||||| AAAGTTGCAA TTCGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GTGCATTGAT 480 GGTCCAAGTC TGGCCTTGAT TGAGAC 43781 | ||| || |||||| ||| |||| GACCCATGTT TGGCCTCGAT CAAGAC 506 hqPGS_C08HBa0235H18.1+_SGN-E302616- (43276 43781) ******************************************************************************** EST sequence 800 -strand 632 n (File: SGN-E251623-) 1 AGGGCAAGTA AATGTGCTTG TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT 61 TTTCTTGAAA AATTTGGACA ACTCTGTAGG GCCACATGGA CCTTGGGTGC AACAATATTG 121 TTGTCCTCCA AACGTGGTAC AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG 181 ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT 241 TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC 301 TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC 361 GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 421 AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT 481 GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA 541 AACGGTGTAT GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAAGTAT AAGTCACACA 601 AAGAAGGAAG AAGAGACCAA AAGAAGATGT CA Predicted gene structure (within gDNA segment 41829 to 46037): Exon 1 43276 43781 ( 506 n); cDNA 1 506 ( 506 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E251623- 0.864 506 0.801 C PGS_C08HBa0235H18.1+_SGN-E251623- (43276 43781) Alignment (genomic DNA sequence = upper lines): AGGGCAAGCA AATGTGCTAG TAGCATCATC TTGTGGGTAG CTATAGGCAT CAGGGCATCT 43335 |||||||| | |||||||| | ||| ||| || |||||||||| ||||| |||| | || ||||| AGGGCAAGTA AATGTGCTTG TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT 60 CTGTTTGAAA AATTTCGACC ACTCAGTAGG ACTACATGGA CCTTGGGTGC AACAATATTG 43395 | |||||| ||||| ||| |||| ||||| | ||||||| |||||||||| |||||||||| TTTCTTGAAA AATTTGGACA ACTCTGTAGG GCCACATGGA CCTTGGGTGC AACAATATTG 120 TTGTCCTCCA AACGTGGTAC AAGGATTGTT ACATCCTCCG GTTACTTTAA GTTGACTAGG 43455 |||||||||| |||||||||| |||| ||||| ||||||||| | ||| |||| | | ||| TTGTCCTCCA AACGTGGTAC AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG 180 GCATTCACCG TTTATATTGG CGGTGCATTG AATTGAGTGG CATTTTCCTC CACTGGAATT 43515 |||||||| |||||||||| | ||||| || ||||| ||| |||||||||| |||| | || ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT 240 GGTTGTGGCG AAAGTCATCG GTATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC 43575 |||| ||| |||||||| | | |||||||| |||||||||| |||||||||| |||| ||||| TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC 300 TAGGTTGTTA AACTGGTTCA AGGCGTATTC GGTCAAGGTG TTTGGCGGTT TACCCCACCC 43635 || |||| || ||||||| || ||||||| || || | |||| ||||| |||| | ||||| || TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC 360 GGTACACTGC AAGACTCCAC CACAATCACC AGTCTCACAA GAACCTCTAC CAGCACCGTC 43695 ||||||||| |||||||||| |||||||||| ||||| ||| | |||||| | | ||| | | GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 420 AAAGTTGCAT TTAGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCA GTGCATTGAT 43755 ||||||||| |||||||| |||||||||| |||||||||| || |||||| | |||||||| AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT 480 GGTCCAAGTC TGGCCTTGAT TGAGAC 43781 | ||| || |||||| ||| |||||| GACCCATGTT TGGCCTCGAT TGAGAC 506 hqPGS_C08HBa0235H18.1+_SGN-E251623- (43276 43781) ******************************************************************************** EST sequence 975 -strand 611 n (File: SGN-E256710-) 1 AGGGCAAGTA AATGTGCTTG TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT 61 TTTCTTGAAA AATTTGGACA ACTCTGTAGG GCCACATGGA CCTTGGGTGC AACAATATTG 121 TTGTCCTCCA AACGTGGTAC AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG 181 ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT 241 TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC 301 TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC 361 GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 421 AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT 481 GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA 541 AACGGTGTAT GGACAGTTGT TGCGTACCTC AATAGTGGCA GCATAAGTAT AAGTCACACA 601 AAGAAGGAAG A Predicted gene structure (within gDNA segment 41829 to 45827): Exon 1 43276 43781 ( 506 n); cDNA 1 506 ( 506 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E256710- 0.864 506 0.828 C PGS_C08HBa0235H18.1+_SGN-E256710- (43276 43781) Alignment (genomic DNA sequence = upper lines): AGGGCAAGCA AATGTGCTAG TAGCATCATC TTGTGGGTAG CTATAGGCAT CAGGGCATCT 43335 |||||||| | |||||||| | ||| ||| || |||||||||| ||||| |||| | || ||||| AGGGCAAGTA AATGTGCTTG TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT 60 CTGTTTGAAA AATTTCGACC ACTCAGTAGG ACTACATGGA CCTTGGGTGC AACAATATTG 43395 | |||||| ||||| ||| |||| ||||| | ||||||| |||||||||| |||||||||| TTTCTTGAAA AATTTGGACA ACTCTGTAGG GCCACATGGA CCTTGGGTGC AACAATATTG 120 TTGTCCTCCA AACGTGGTAC AAGGATTGTT ACATCCTCCG GTTACTTTAA GTTGACTAGG 43455 |||||||||| |||||||||| |||| ||||| ||||||||| | ||| |||| | | ||| TTGTCCTCCA AACGTGGTAC AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG 180 GCATTCACCG TTTATATTGG CGGTGCATTG AATTGAGTGG CATTTTCCTC CACTGGAATT 43515 |||||||| |||||||||| | ||||| || ||||| ||| |||||||||| |||| | || ACATTCACCA TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT 240 GGTTGTGGCG AAAGTCATCG GTATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC 43575 |||| ||| |||||||| | | |||||||| |||||||||| |||||||||| |||| ||||| TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC 300 TAGGTTGTTA AACTGGTTCA AGGCGTATTC GGTCAAGGTG TTTGGCGGTT TACCCCACCC 43635 || |||| || ||||||| || ||||||| || || | |||| ||||| |||| | ||||| || TAAGTTGCTA AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC 360 GGTACACTGC AAGACTCCAC CACAATCACC AGTCTCACAA GAACCTCTAC CAGCACCGTC 43695 ||||||||| |||||||||| |||||||||| ||||| ||| | |||||| | | ||| | | GGTACACTGT AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 420 AAAGTTGCAT TTAGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCA GTGCATTGAT 43755 ||||||||| |||||||| |||||||||| |||||||||| || |||||| | |||||||| AAAGTTGCAA CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT 480 GGTCCAAGTC TGGCCTTGAT TGAGAC 43781 | ||| || |||||| ||| |||||| GACCCATGTT TGGCCTCGAT TGAGAC 506 hqPGS_C08HBa0235H18.1+_SGN-E256710- (43276 43781) ******************************************************************************** EST sequence 456 -strand 645 n (File: SGN-E211803-) 1 GGGCAAGTAA ATGTGCTNGT AGGATCGTCT NGTGGGTAGC TATAAGCATC GGGACATCTT 61 TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 121 TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 181 CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 241 GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 301 AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 361 GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 421 AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 481 ACCCATGTTT GGCCTCGATT GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA 541 ACGGTGTATG GACAGTTGTT GCGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACACAA 601 AGAAGGAAGA AGAGAACAAA AGAAGATGTC AAGTAGCCCA TGTTT Predicted gene structure (within gDNA segment 41839 to 46177): Exon 1 43277 43781 ( 505 n); cDNA 1 505 ( 505 n); score: 0.861 MATCH C08HBa0235H18.1+ SGN-E211803- 0.861 505 0.783 C PGS_C08HBa0235H18.1+_SGN-E211803- (43277 43781) Alignment (genomic DNA sequence = upper lines): GGGCAAGCAA ATGTGCTAGT AGCATCATCT TGTGGGTAGC TATAGGCATC AGGGCATCTC 43336 ||||||| || ||||||| || || ||| ||| ||||||||| |||| ||||| || ||||| GGGCAAGTAA ATGTGCTNGT AGGATCGTCT NGTGGGTAGC TATAAGCATC GGGACATCTT 60 TGTTTGAAAA ATTTCGACCA CTCAGTAGGA CTACATGGAC CTTGGGTGCA ACAATATTGT 43396 | ||||||| |||| ||| | ||| ||||| | |||||||| |||||||||| |||||||||| TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 120 TGTCCTCCAA ACGTGGTACA AGGATTGTTA CATCCTCCGG TTACTTTAAG TTGACTAGGG 43456 |||||||||| |||||||||| ||| |||||| |||||||| | ||| ||||| | ||| TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 180 CATTCACCGT TTATATTGGC GGTGCATTGA ATTGAGTGGC ATTTTCCTCC ACTGGAATTG 43516 |||||||| | |||||||||| ||||| ||| |||| ||| | |||||||||| ||| | || CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 240 GTTGTGGCGA AAGTCATCGG TATATTAAAT CCATCGACTA AAGAAATGTC CCAGAAATCT 43576 |||| ||| | ||||||| || ||||||||| |||||||||| |||||||||| ||| |||||| GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 300 AGGTTGTTAA ACTGGTTCAA GGCGTATTCG GTCAAGGTGT TTGGCGGTTT ACCCCACCCG 43636 | |||| ||| |||||| ||| |||||| ||| | | ||||| |||| ||||| ||||| ||| AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 360 GTACACTGCA AGACTCCACC ACAATCACCA GTCTCACAAG AACCTCTACC AGCACCGTCA 43696 |||||||| | |||||||||| |||||||||| |||| ||| | |||||| || ||| | | | GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 420 AAGTTGCATT TAGTACGACC CCATATACGT GCCATCTTAG TGCCCCTCAG TGCATTGATG 43756 |||||||| ||||||||| |||||||||| |||||||||| | |||||| | ||||||||| AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 480 GTCCAAGTCT GGCCTTGATT GAGAC 43781 ||| || | ||||| |||| ||||| ACCCATGTTT GGCCTCGATT GAGAC 505 hqPGS_C08HBa0235H18.1+_SGN-E211803- (43277 43781) ******************************************************************************** EST sequence 467 -strand 617 n (File: SGN-E211417-) 1 GGGCAAGTAA ATGTGCTGTA GGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTA 61 TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGATC CTTGGGTGCA ACAATATTGT 121 TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 181 CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 241 GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 301 AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 361 GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 421 AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 481 ACCCATGTTT GGCCTCGATT GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA 541 ACGGTGTATG GACAGTTGTT GCGTAAATCA ATAGTGGCAG CATAAGTATA AGTCACACAA 601 AGAAGGAAGA AGAGAAC Predicted gene structure (within gDNA segment 41776 to 45897): Exon 1 43277 43781 ( 505 n); cDNA 1 505 ( 505 n); score: 0.853 MATCH C08HBa0235H18.1+ SGN-E211417- 0.853 505 0.818 C PGS_C08HBa0235H18.1+_SGN-E211417- (43277 43781) Alignment (genomic DNA sequence = upper lines): GGGCAAGCAA ATGTGCTAGT AGCATCATCT TGTGGGTAGC TATAGGCATC AGGGCATCTC 43336 ||||||| || ||||||| | ||| ||| |||||||||| |||| ||||| || ||||| GGGCAAGTAA ATGTGCTGTA GGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTA 60 TGTTTGAAAA ATTTCGACCA CTCAGTAGGA CTACATGGAC CTTGGGTGCA ACAATATTGT 43396 | ||||||| |||| ||| | ||| ||||| | ||||| | |||||||||| |||||||||| TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGATC CTTGGGTGCA ACAATATTGT 120 TGTCCTCCAA ACGTGGTACA AGGATTGTTA CATCCTCCGG TTACTTTAAG TTGACTAGGG 43456 |||||||||| |||||||||| ||| |||||| |||||||| | ||| ||||| | ||| TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 180 CATTCACCGT TTATATTGGC GGTGCATTGA ATTGAGTGGC ATTTTCCTCC ACTGGAATTG 43516 |||||||| | |||||||||| ||||| ||| |||| ||| | |||||||||| ||| | || CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 240 GTTGTGGCGA AAGTCATCGG TATATTAAAT CCATCGACTA AAGAAATGTC CCAGAAATCT 43576 |||| ||| | ||||||| || ||||||||| |||||||||| |||||||||| ||| |||||| GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 300 AGGTTGTTAA ACTGGTTCAA GGCGTATTCG GTCAAGGTGT TTGGCGGTTT ACCCCACCCG 43636 | |||| ||| |||||| ||| |||||| ||| | | ||||| |||| ||||| ||||| ||| AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 360 GTACACTGCA AGACTCCACC ACAATCACCA GTCTCACAAG AACCTCTACC AGCACCGTCA 43696 |||||||| | |||||||||| |||||||||| |||| ||| | |||||| || ||| | | | GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 420 AAGTTGCATT TAGTACGACC CCATATACGT GCCATCTTAG TGCCCCTCAG TGCATTGATG 43756 |||||||| ||||||||| |||||||||| |||||||||| | |||||| | ||||||||| AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 480 GTCCAAGTCT GGCCTTGATT GAGAC 43781 ||| || | ||||| |||| ||||| ACCCATGTTT GGCCTCGATT GAGAC 505 hqPGS_C08HBa0235H18.1+_SGN-E211417- (43277 43781) ******************************************************************************** EST sequence 526 -strand 636 n (File: SGN-E211072-) 1 GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 61 TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 121 TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 181 CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 241 GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 301 AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 361 GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 421 AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 481 ACCCATGTTT GGCCTCGATT GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA 541 ACGGTGTATG GACAGTTGTT GCGTACCTCA ATAGTGGCAG CATAAGTATA AGTCACACAA 601 AGAAGGAAGA AGAGAACAAA AGAAGATGTC AAGTAG Predicted gene structure (within gDNA segment 41839 to 46087): Exon 1 43277 43781 ( 505 n); cDNA 1 505 ( 505 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E211072- 0.863 505 0.794 C PGS_C08HBa0235H18.1+_SGN-E211072- (43277 43781) Alignment (genomic DNA sequence = upper lines): GGGCAAGCAA ATGTGCTAGT AGCATCATCT TGTGGGTAGC TATAGGCATC AGGGCATCTC 43336 ||||||| || ||||||| || || ||| ||| |||||||||| |||| ||||| || ||||| GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 60 TGTTTGAAAA ATTTCGACCA CTCAGTAGGA CTACATGGAC CTTGGGTGCA ACAATATTGT 43396 | ||||||| |||| ||| | ||| ||||| | |||||||| |||||||||| |||||||||| TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 120 TGTCCTCCAA ACGTGGTACA AGGATTGTTA CATCCTCCGG TTACTTTAAG TTGACTAGGG 43456 |||||||||| |||||||||| ||| |||||| |||||||| | ||| ||||| | ||| TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 180 CATTCACCGT TTATATTGGC GGTGCATTGA ATTGAGTGGC ATTTTCCTCC ACTGGAATTG 43516 |||||||| | |||||||||| ||||| ||| |||| ||| | |||||||||| ||| | || CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 240 GTTGTGGCGA AAGTCATCGG TATATTAAAT CCATCGACTA AAGAAATGTC CCAGAAATCT 43576 |||| ||| | ||||||| || ||||||||| |||||||||| |||||||||| ||| |||||| GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 300 AGGTTGTTAA ACTGGTTCAA GGCGTATTCG GTCAAGGTGT TTGGCGGTTT ACCCCACCCG 43636 | |||| ||| |||||| ||| |||||| ||| | | ||||| |||| ||||| ||||| ||| AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 360 GTACACTGCA AGACTCCACC ACAATCACCA GTCTCACAAG AACCTCTACC AGCACCGTCA 43696 |||||||| | |||||||||| |||||||||| |||| ||| | |||||| || ||| | | | GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 420 AAGTTGCATT TAGTACGACC CCATATACGT GCCATCTTAG TGCCCCTCAG TGCATTGATG 43756 |||||||| ||||||||| |||||||||| |||||||||| | |||||| | ||||||||| AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 480 GTCCAAGTCT GGCCTTGATT GAGAC 43781 ||| || | ||||| |||| ||||| ACCCATGTTT GGCCTCGATT GAGAC 505 hqPGS_C08HBa0235H18.1+_SGN-E211072- (43277 43781) ******************************************************************************** EST sequence 585 -strand 630 n (File: SGN-E213091-) 1 GGGCAAGTAA ATGTGCTNGT AGGATCGTCT GTGGGTAGCT ATAAGCATCG GGACATCTTT 61 TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT 121 GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC 181 ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG 241 TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA 301 AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG 361 TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA 421 AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA 481 CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA 541 CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA 601 GAAGGAAGAA GAGAACAAAA GAAGATGTCA Predicted gene structure (within gDNA segment 41849 to 46037): Exon 1 43277 43781 ( 505 n); cDNA 1 504 ( 504 n); score: 0.861 MATCH C08HBa0235H18.1+ SGN-E213091- 0.861 505 0.802 C PGS_C08HBa0235H18.1+_SGN-E213091- (43277 43781) Alignment (genomic DNA sequence = upper lines): GGGCAAGCAA ATGTGCTAGT AGCATCATCT TGTGGGTAGC TATAGGCATC AGGGCATCTC 43336 ||||||| || ||||||| || || ||| || |||||||||| |||| ||||| || ||||| GGGCAAGTAA ATGTGCTNGT AGGATCGTC- TGTGGGTAGC TATAAGCATC GGGACATCTT 59 TGTTTGAAAA ATTTCGACCA CTCAGTAGGA CTACATGGAC CTTGGGTGCA ACAATATTGT 43396 | ||||||| |||| ||| | ||| ||||| | |||||||| |||||||||| |||||||||| TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 119 TGTCCTCCAA ACGTGGTACA AGGATTGTTA CATCCTCCGG TTACTTTAAG TTGACTAGGG 43456 |||||||||| |||||||||| ||| |||||| |||||||| | ||| ||||| | ||| TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 179 CATTCACCGT TTATATTGGC GGTGCATTGA ATTGAGTGGC ATTTTCCTCC ACTGGAATTG 43516 |||||||| | |||||||||| ||||| ||| |||| ||| | |||||||||| ||| | || CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 239 GTTGTGGCGA AAGTCATCGG TATATTAAAT CCATCGACTA AAGAAATGTC CCAGAAATCT 43576 |||| ||| | ||||||| || ||||||||| |||||||||| |||||||||| ||| |||||| GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 299 AGGTTGTTAA ACTGGTTCAA GGCGTATTCG GTCAAGGTGT TTGGCGGTTT ACCCCACCCG 43636 | |||| ||| |||||| ||| |||||| ||| | | ||||| |||| ||||| ||||| ||| AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 359 GTACACTGCA AGACTCCACC ACAATCACCA GTCTCACAAG AACCTCTACC AGCACCGTCA 43696 |||||||| | |||||||||| |||||||||| |||| ||| | |||||| || ||| | | | GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 419 AAGTTGCATT TAGTACGACC CCATATACGT GCCATCTTAG TGCCCCTCAG TGCATTGATG 43756 |||||||| ||||||||| |||||||||| |||||||||| | |||||| | ||||||||| AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 479 GTCCAAGTCT GGCCTTGATT GAGAC 43781 ||| || | ||||| |||| ||||| ACCCATGTTT GGCCTCGATT GAGAC 504 hqPGS_C08HBa0235H18.1+_SGN-E213091- (43277 43781) ******************************************************************************** EST sequence 580 -strand 464 n (File: SGN-E201711-) 1 GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 61 TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 121 TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 181 CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 241 GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 301 AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 361 GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 421 AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCC Predicted gene structure (within gDNA segment 41839 to 44367): Exon 1 43277 43740 ( 464 n); cDNA 1 464 ( 464 n); score: 0.866 MATCH C08HBa0235H18.1+ SGN-E201711- 0.866 464 1.000 C PGS_C08HBa0235H18.1+_SGN-E201711- (43277 43740) Alignment (genomic DNA sequence = upper lines): GGGCAAGCAA ATGTGCTAGT AGCATCATCT TGTGGGTAGC TATAGGCATC AGGGCATCTC 43336 ||||||| || ||||||| || || ||| ||| |||||||||| |||| ||||| || ||||| GGGCAAGTAA ATGTGCTTGT AGGATCGTCT TGTGGGTAGC TATAAGCATC GGGACATCTT 60 TGTTTGAAAA ATTTCGACCA CTCAGTAGGA CTACATGGAC CTTGGGTGCA ACAATATTGT 43396 | ||||||| |||| ||| | ||| ||||| | |||||||| |||||||||| |||||||||| TTCTTGAAAA ATTTGGACAA CTCTGTAGGG CCACATGGAC CTTGGGTGCA ACAATATTGT 120 TGTCCTCCAA ACGTGGTACA AGGATTGTTA CATCCTCCGG TTACTTTAAG TTGACTAGGG 43456 |||||||||| |||||||||| ||| |||||| |||||||| | ||| ||||| | ||| TGTCCTCCAA ACGTGGTACA AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA 180 CATTCACCGT TTATATTGGC GGTGCATTGA ATTGAGTGGC ATTTTCCTCC ACTGGAATTG 43516 |||||||| | |||||||||| ||||| ||| |||| ||| | |||||||||| ||| | || CATTCACCAT TTATATTGGC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 240 GTTGTGGCGA AAGTCATCGG TATATTAAAT CCATCGACTA AAGAAATGTC CCAGAAATCT 43576 |||| ||| | ||||||| || ||||||||| |||||||||| |||||||||| ||| |||||| GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 300 AGGTTGTTAA ACTGGTTCAA GGCGTATTCG GTCAAGGTGT TTGGCGGTTT ACCCCACCCG 43636 | |||| ||| |||||| ||| |||||| ||| | | ||||| |||| ||||| ||||| ||| AAGTTGCTAA ACTGGTCCAA GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 360 GTACACTGCA AGACTCCACC ACAATCACCA GTCTCACAAG AACCTCTACC AGCACCGTCA 43696 |||||||| | |||||||||| |||||||||| |||| ||| | |||||| || ||| | | | GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 420 AAGTTGCATT TAGTACGACC CCATATACGT GCCATCTTAG TGCC 43740 |||||||| ||||||||| |||||||||| |||||||||| | || AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCC 464 hqPGS_C08HBa0235H18.1+_SGN-E201711- (43277 43740) ******************************************************************************** EST sequence 595 -strand 704 n (File: SGN-E212978-) 1 GAAATTTGAT CAGCAACACC ATTAGGACAA AAGACAACCC TATAGTTTGA CTACCACCAG 61 GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT ATAAGCATCG GGACATCTTT 121 TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT 181 GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC 241 ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG 301 TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA 361 AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG 421 TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA 481 AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA 541 CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA 601 CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA 661 GAAGGAAGAA GAGAACAAAA GAAGATGTCA AGTAGCCCAT GTTT Predicted gene structure (within gDNA segment 41249 to 46177): Exon 1 43278 43781 ( 504 n); cDNA 61 564 ( 504 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E212978- 0.863 504 0.716 C PGS_C08HBa0235H18.1+_SGN-E212978- (43278 43781) Alignment (genomic DNA sequence = upper lines): GGCAAGCAAA TGTGCTAGTA GCATCATCTT GTGGGTAGCT ATAGGCATCA GGGCATCTCT 43337 |||||| ||| |||||| ||| | ||| |||| |||||||||| ||| ||||| || ||||| | GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT ATAAGCATCG GGACATCTTT 120 GTTTGAAAAA TTTCGACCAC TCAGTAGGAC TACATGGACC TTGGGTGCAA CAATATTGTT 43397 |||||||| ||| ||| || || ||||| | ||||||||| |||||||||| |||||||||| TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT 180 GTCCTCCAAA CGTGGTACAA GGATTGTTAC ATCCTCCGGT TACTTTAAGT TGACTAGGGC 43457 |||||||||| |||||||||| || ||||||| ||||||| | ||| ||||| | ||| | GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC 240 ATTCACCGTT TATATTGGCG GTGCATTGAA TTGAGTGGCA TTTTCCTCCA CTGGAATTGG 43517 ||||||| || ||||||||| ||||| |||| ||| ||| || |||||||||| || | || | ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG 300 TTGTGGCGAA AGTCATCGGT ATATTAAATC CATCGACTAA AGAAATGTCC CAGAAATCTA 43577 ||| ||| || |||||| || |||||||||| |||||||||| |||||||||| || ||||||| TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA 360 GGTTGTTAAA CTGGTTCAAG GCGTATTCGG TCAAGGTGTT TGGCGGTTTA CCCCACCCGG 43637 |||| |||| ||||| |||| ||||| |||| | |||||| ||| ||||| ||||| |||| AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG 420 TACACTGCAA GACTCCACCA CAATCACCAG TCTCACAAGA ACCTCTACCA GCACCGTCAA 43697 ||||||| || |||||||||| |||||||||| ||| ||| | |||||| || ||| | | || TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA 480 AGTTGCATTT AGTACGACCC CATATACGTG CCATCTTAGT GCCCCTCAGT GCATTGATGG 43757 ||||||| |||||||||| |||||||||| |||||||||| |||||| | ||||||||| AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA 540 TCCAAGTCTG GCCTTGATTG AGAC 43781 ||| || || |||| ||||| |||| CCCATGTTTG GCCTCGATTG AGAC 564 hqPGS_C08HBa0235H18.1+_SGN-E212978- (43278 43781) ******************************************************************************** EST sequence 716 -strand 643 n (File: SGN-E213897-) 1 AAGGGGAAAT TTGAATCAGC AACACCATTA GGACAAAAGA CANCCNTATA GTTTGTACTA 61 CCACCAGGGG CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG 121 ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA 181 ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC 241 GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT 301 AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA 361 AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC 421 CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC 481 AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC 541 ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC 601 CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTG Predicted gene structure (within gDNA segment 41169 to 45487): Exon 1 43278 43781 ( 504 n); cDNA 69 572 ( 504 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E213897- 0.863 504 0.784 C PGS_C08HBa0235H18.1+_SGN-E213897- (43278 43781) Alignment (genomic DNA sequence = upper lines): GGCAAGCAAA TGTGCTAGTA GCATCATCTT GTGGGTAGCT ATAGGCATCA GGGCATCTCT 43337 |||||| ||| |||||| ||| | ||| |||| |||||||||| ||| ||||| || ||||| | GGCAAGTAAA TGTGCTTGTA GGATCGTCTT GTGGGTAGCT ATAAGCATCG GGACATCTTT 128 GTTTGAAAAA TTTCGACCAC TCAGTAGGAC TACATGGACC TTGGGTGCAA CAATATTGTT 43397 |||||||| ||| ||| || || ||||| | ||||||||| |||||||||| |||||||||| TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC TTGGGTGCAA CAATATTGTT 188 GTCCTCCAAA CGTGGTACAA GGATTGTTAC ATCCTCCGGT TACTTTAAGT TGACTAGGGC 43457 |||||||||| |||||||||| || ||||||| ||||||| | ||| ||||| | ||| | GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC 248 ATTCACCGTT TATATTGGCG GTGCATTGAA TTGAGTGGCA TTTTCCTCCA CTGGAATTGG 43517 ||||||| || ||||||||| ||||| |||| ||| ||| || |||||||||| || | || | ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG 308 TTGTGGCGAA AGTCATCGGT ATATTAAATC CATCGACTAA AGAAATGTCC CAGAAATCTA 43577 ||| ||| || |||||| || |||||||||| |||||||||| |||||||||| || ||||||| TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA 368 GGTTGTTAAA CTGGTTCAAG GCGTATTCGG TCAAGGTGTT TGGCGGTTTA CCCCACCCGG 43637 |||| |||| ||||| |||| ||||| |||| | |||||| ||| ||||| ||||| |||| AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG 428 TACACTGCAA GACTCCACCA CAATCACCAG TCTCACAAGA ACCTCTACCA GCACCGTCAA 43697 ||||||| || |||||||||| |||||||||| ||| ||| | |||||| || ||| | | || TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA 488 AGTTGCATTT AGTACGACCC CATATACGTG CCATCTTAGT GCCCCTCAGT GCATTGATGG 43757 ||||||| |||||||||| |||||||||| |||||||||| |||||| | ||||||||| AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA 548 TCCAAGTCTG GCCTTGATTG AGAC 43781 ||| || || |||| ||||| |||| CCCATGTTTG GCCTCGATTG AGAC 572 hqPGS_C08HBa0235H18.1+_SGN-E213897- (43278 43781) ******************************************************************************** EST sequence 751 -strand 659 n (File: SGN-E214263-) 1 AGGGGCAAGT AAATGTGCTA GTAGGATCAT CTTGTGGGTA GCTATACGCA TCAGGACATC 61 TTTGTTTGAA AATCTCGACA AATCAGTAGG GCCACATGGA CCTTGTGTGC AACAATATTG 121 TTGTCCTCCG AACGTGGTAC AAGGATTGTT ACATCCTCCG GGTACCNTAA GTGAACCAGG 181 ACATTCACCA TTTATATTAG CCGTACAATG AATTGCATGG CATTTCCCTC CACTAGGATT 241 GGTCGGGGCG AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC 301 TAGGTTGCTA AACTGGTCCA AGGCGTACTC GGCCAGGGTG TTTGGTGGTT TGCCCCACCC 361 GGTACATTGC AAGACCCCAC CACAATCACC AGTCTGACAT GAACCTCTAC CAGCACCATC 421 AAAGTTGCAA TTCGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GTGCATTGAT 481 GACCCATGTT TGGCCTCGAT CAAGACGTCG ACCACCGCCT ATTGGGGTCG ACGCCGCCCA 541 GACGGTGTAT GGACAGTTGT TGCGTACCTC GAAAGTGGCA GCATAAGTGT AAGTCACAAA 601 AGCAAGAAGG AAGAAAACAA AAGAAGATCT CAAGTAGGCC ATGTTTGTGG AACTATTTT Predicted gene structure (within gDNA segment 41712 to 46244): Exon 1 43278 43781 ( 504 n); cDNA 4 506 ( 503 n); score: 0.889 MATCH C08HBa0235H18.1+ SGN-E214263- 0.889 504 0.765 C PGS_C08HBa0235H18.1+_SGN-E214263- (43278 43781) Alignment (genomic DNA sequence = upper lines): GGCAAGCAAA TGTGCTAGTA GCATCATCTT GTGGGTAGCT ATAGGCATCA GGGCATCTCT 43337 |||||| ||| |||||||||| | |||||||| |||||||||| ||| |||||| || ||||| | GGCAAGTAAA TGTGCTAGTA GGATCATCTT GTGGGTAGCT ATACGCATCA GGACATCTTT 63 GTTTGAAAAA TTTCGACCAC TCAGTAGGAC TACATGGACC TTGGGTGCAA CAATATTGTT 43397 ||||| |||| | ||||| | |||||||| | ||||||||| ||| |||||| |||||||||| GTTTG-AAAA TCTCGACAAA TCAGTAGGGC CACATGGACC TTGTGTGCAA CAATATTGTT 122 GTCCTCCAAA CGTGGTACAA GGATTGTTAC ATCCTCCGGT TACTTTAAGT TGACTAGGGC 43457 ||||||| || |||||||||| |||||||||| ||||||||| ||| ||||| || ||| | GTCCTCCGAA CGTGGTACAA GGATTGTTAC ATCCTCCGGG TACCNTAAGT GAACCAGGAC 182 ATTCACCGTT TATATTGGCG GTGCATTGAA TTGAGTGGCA TTTTCCTCCA CTGGAATTGG 43517 ||||||| || |||||| || || || |||| ||| ||||| ||| |||||| || | ||||| ATTCACCATT TATATTAGCC GTACAATGAA TTGCATGGCA TTTCCCTCCA CTAGGATTGG 242 TTGTGGCGAA AGTCATCGGT ATATTAAATC CATCGACTAA AGAAATGTCC CAGAAATCTA 43577 | | |||||| |||||| || |||||||||| |||||||||| |||||||||| |||||||||| TCGGGGCGAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAGAAATCTA 302 GGTTGTTAAA CTGGTTCAAG GCGTATTCGG TCAAGGTGTT TGGCGGTTTA CCCCACCCGG 43637 ||||| |||| ||||| |||| ||||| |||| || |||||| ||| ||||| |||||||||| GGTTGCTAAA CTGGTCCAAG GCGTACTCGG CCAGGGTGTT TGGTGGTTTG CCCCACCCGG 362 TACACTGCAA GACTCCACCA CAATCACCAG TCTCACAAGA ACCTCTACCA GCACCGTCAA 43697 |||| ||||| ||| |||||| |||||||||| ||| ||| || |||||||||| ||||| |||| TACATTGCAA GACCCCACCA CAATCACCAG TCTGACATGA ACCTCTACCA GCACCATCAA 422 AGTTGCATTT AGTACGACCC CATATACGTG CCATCTTAGT GCCCCTCAGT GCATTGATGG 43757 ||||||| || ||||||||| |||||||||| |||||||||| ||||||| || ||||||||| AGTTGCAATT CGTACGACCC CATATACGTG CCATCTTAGT GCCCCTCGGT GCATTGATGA 482 TCCAAGTCTG GCCTTGATTG AGAC 43781 ||| || || |||| ||| |||| CCCATGTTTG GCCTCGATCA AGAC 506 hqPGS_C08HBa0235H18.1+_SGN-E214263- (43278 43781) ******************************************************************************** EST sequence 618 -strand 639 n (File: SGN-E335205-) 1 GGCAAGTAAA TGTGTTAGTA GGATCATCTT GTGGGTAGCT ATACGCATCA GGACATCTTT 61 GTTTGAAAAA TCTCGACAAA TCAGTAGGGC CACATGGACC TTGTGTGCAA CAATATTGTT 121 GTCCTCCGAA CGTGGTACAA GGATTGTTAC ATCCTCCGGG TACCCTAAGT GAACCAGGAC 181 ATTCACCATT TATATTAGCC GTACAATGAA TTGCATGGCA TTTCCCTCCA CTAGGATTGG 241 TCGGGGCGAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAGAAATCTA 301 GGTTGCTAAA CTGGTCCAAG GCGTACTCGG CCAGGGTGTT TGGTGGTTTG CCCCACCCGG 361 TACATTGCAA GACCCCACCA CAATCACCAG TCTGACATGA ACCTCTACCA GCACCATCAA 421 AGTTGCAATT CGTACGACCC CATATACGTG CCATCTTAGT GCCCCTCGGT GCATTGATGA 481 CCCATGTTTG GCCTCGATCA AGACGTCGAC CACCGCCTAT TGGGGTCGAC GCCGCCCAGA 541 CGGTGTATGG ACAGTTGTTG CGTACCTCGA AAGTGGCAGC ATAAGTGTAA GTCACAAAAG 601 CAAGAAGGAA GAAAACAAAA GAAGATCTCA AGTAGGCCA Predicted gene structure (within gDNA segment 41732 to 46064): Exon 1 43278 43781 ( 504 n); cDNA 1 504 ( 504 n); score: 0.889 MATCH C08HBa0235H18.1+ SGN-E335205- 0.889 504 0.789 C PGS_C08HBa0235H18.1+_SGN-E335205- (43278 43781) Alignment (genomic DNA sequence = upper lines): GGCAAGCAAA TGTGCTAGTA GCATCATCTT GTGGGTAGCT ATAGGCATCA GGGCATCTCT 43337 |||||| ||| |||| ||||| | |||||||| |||||||||| ||| |||||| || ||||| | GGCAAGTAAA TGTGTTAGTA GGATCATCTT GTGGGTAGCT ATACGCATCA GGACATCTTT 60 GTTTGAAAAA TTTCGACCAC TCAGTAGGAC TACATGGACC TTGGGTGCAA CAATATTGTT 43397 |||||||||| | ||||| | |||||||| | ||||||||| ||| |||||| |||||||||| GTTTGAAAAA TCTCGACAAA TCAGTAGGGC CACATGGACC TTGTGTGCAA CAATATTGTT 120 GTCCTCCAAA CGTGGTACAA GGATTGTTAC ATCCTCCGGT TACTTTAAGT TGACTAGGGC 43457 ||||||| || |||||||||| |||||||||| ||||||||| ||| ||||| || ||| | GTCCTCCGAA CGTGGTACAA GGATTGTTAC ATCCTCCGGG TACCCTAAGT GAACCAGGAC 180 ATTCACCGTT TATATTGGCG GTGCATTGAA TTGAGTGGCA TTTTCCTCCA CTGGAATTGG 43517 ||||||| || |||||| || || || |||| ||| ||||| ||| |||||| || | ||||| ATTCACCATT TATATTAGCC GTACAATGAA TTGCATGGCA TTTCCCTCCA CTAGGATTGG 240 TTGTGGCGAA AGTCATCGGT ATATTAAATC CATCGACTAA AGAAATGTCC CAGAAATCTA 43577 | | |||||| |||||| || |||||||||| |||||||||| |||||||||| |||||||||| TCGGGGCGAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAGAAATCTA 300 GGTTGTTAAA CTGGTTCAAG GCGTATTCGG TCAAGGTGTT TGGCGGTTTA CCCCACCCGG 43637 ||||| |||| ||||| |||| ||||| |||| || |||||| ||| ||||| |||||||||| GGTTGCTAAA CTGGTCCAAG GCGTACTCGG CCAGGGTGTT TGGTGGTTTG CCCCACCCGG 360 TACACTGCAA GACTCCACCA CAATCACCAG TCTCACAAGA ACCTCTACCA GCACCGTCAA 43697 |||| ||||| ||| |||||| |||||||||| ||| ||| || |||||||||| ||||| |||| TACATTGCAA GACCCCACCA CAATCACCAG TCTGACATGA ACCTCTACCA GCACCATCAA 420 AGTTGCATTT AGTACGACCC CATATACGTG CCATCTTAGT GCCCCTCAGT GCATTGATGG 43757 ||||||| || ||||||||| |||||||||| |||||||||| ||||||| || ||||||||| AGTTGCAATT CGTACGACCC CATATACGTG CCATCTTAGT GCCCCTCGGT GCATTGATGA 480 TCCAAGTCTG GCCTTGATTG AGAC 43781 ||| || || |||| ||| |||| CCCATGTTTG GCCTCGATCA AGAC 504 hqPGS_C08HBa0235H18.1+_SGN-E335205- (43278 43781) ******************************************************************************** EST sequence 605 -strand 594 n (File: SGN-E303485-) 1 CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC 61 TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT 121 CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT 181 TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT 241 GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG 301 TTGCTAAACT GGTCCAAGGC GTACTCGGAT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA 361 CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG 421 TTGCAACCAG TACGACCCCA TATACGTGCC ATTTTAGTTC CCCTCGGAGC ATTGATGACC 481 CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATGG GAGTCGATCC CGCCCAAACG 541 GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT AAGTATAAGT CACA Predicted gene structure (within gDNA segment 41869 to 47209): Exon 1 43280 43781 ( 502 n); cDNA 1 502 ( 502 n); score: 0.861 MATCH C08HBa0235H18.1+ SGN-E303485- 0.861 502 0.845 C PGS_C08HBa0235H18.1+_SGN-E303485- (43280 43781) Alignment (genomic DNA sequence = upper lines): CAAGCAAATG TGCTAGTAGC ATCATCTTGT GGGTAGCTAT AGGCATCAGG GCATCTCTGT 43339 |||| ||||| |||| |||| ||| |||||| |||||||||| | ||||| || ||||| | CAAGTAAATG TGCTTGTAGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC 60 TTGAAAAATT TCGACCACTC AGTAGGACTA CATGGACCTT GGGTGCAACA ATATTGTTGT 43399 |||||||||| | ||| |||| ||||| | | |||||||||| |||||||||| |||||||||| TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT 120 CCTCCAAACG TGGTACAAGG ATTGTTACAT CCTCCGGTTA CTTTAAGTTG ACTAGGGCAT 43459 |||||||||| |||||||||| ||||||||| ||||| | || | ||||| | ||| ||| CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT 180 TCACCGTTTA TATTGGCGGT GCATTGAATT GAGTGGCATT TTCCTCCACT GGAATTGGTT 43519 ||||| |||| ||||||| || ||| |||||| | ||| |||| |||||||||| | || ||| TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT 240 GTGGCGAAAG TCATCGGTAT ATTAAATCCA TCGACTAAAG AAATGTCCCA GAAATCTAGG 43579 | ||| |||| |||| || || |||||||||| |||||||||| |||||||||| ||||||| | GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG 300 TTGTTAAACT GGTTCAAGGC GTATTCGGTC AAGGTGTTTG GCGGTTTACC CCACCCGGTA 43639 ||| |||||| ||| |||||| ||| |||| | |||||||| | ||||| || ||| |||||| TTGCTAAACT GGTCCAAGGC GTACTCGGAT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA 360 CACTGCAAGA CTCCACCACA ATCACCAGTC TCACAAGAAC CTCTACCAGC ACCGTCAAAG 43699 ||||| |||| |||||||||| |||||||||| | ||| | || |||| || || | | | |||| CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG 420 TTGCATTTAG TACGACCCCA TATACGTGCC ATCTTAGTGC CCCTCAGTGC ATTGATGGTC 43759 ||||| || |||||||||| |||||||||| || ||||| | ||||| | || ||||||| | TTGCAACCAG TACGACCCCA TATACGTGCC ATTTTAGTTC CCCTCGGAGC ATTGATGACC 480 CAAGTCTGGC CTTGATTGAG AC 43781 || || |||| || ||||||| || CATGTTTGGC CTCGATTGAG AC 502 hqPGS_C08HBa0235H18.1+_SGN-E303485- (43280 43781) ******************************************************************************** EST sequence 644 -strand 642 n (File: SGN-E212383-) 1 CAAGTAAATG TGCTGTAGGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC 61 TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT 121 CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT 181 TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT 241 GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG 301 TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA 361 CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG 421 TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC 481 CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG 541 GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT AAGTATAAGT CACACAAAGA 601 AGGAAGAAGA GAACAAAAGA AGATGTCAAG TAGCCCATGT TT Predicted gene structure (within gDNA segment 41869 to 46177): Exon 1 43280 43781 ( 502 n); cDNA 1 502 ( 502 n); score: 0.857 MATCH C08HBa0235H18.1+ SGN-E212383- 0.857 502 0.782 C PGS_C08HBa0235H18.1+_SGN-E212383- (43280 43781) Alignment (genomic DNA sequence = upper lines): CAAGCAAATG TGCTAGTAGC ATCATCTTGT GGGTAGCTAT AGGCATCAGG GCATCTCTGT 43339 |||| ||||| |||| | ||| |||||| |||||||||| | ||||| || ||||| | CAAGTAAATG TGCTGTAGGG ATCGTCTTGT GGGTAGCTAT AAGCATCGGG ACATCTTTTC 60 TTGAAAAATT TCGACCACTC AGTAGGACTA CATGGACCTT GGGTGCAACA ATATTGTTGT 43399 |||||||||| | ||| |||| ||||| | | |||||||||| |||||||||| |||||||||| TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACCTT GGGTGCAACA ATATTGTTGT 120 CCTCCAAACG TGGTACAAGG ATTGTTACAT CCTCCGGTTA CTTTAAGTTG ACTAGGGCAT 43459 |||||||||| |||||||||| ||||||||| ||||| | || | ||||| | ||| ||| CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT 180 TCACCGTTTA TATTGGCGGT GCATTGAATT GAGTGGCATT TTCCTCCACT GGAATTGGTT 43519 ||||| |||| ||||||| || ||| |||||| | ||| |||| |||||||||| | || ||| TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT 240 GTGGCGAAAG TCATCGGTAT ATTAAATCCA TCGACTAAAG AAATGTCCCA GAAATCTAGG 43579 | ||| |||| |||| || || |||||||||| |||||||||| |||||||||| ||||||| | GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG 300 TTGTTAAACT GGTTCAAGGC GTATTCGGTC AAGGTGTTTG GCGGTTTACC CCACCCGGTA 43639 ||| |||||| ||| |||||| ||| |||| | |||||||| | ||||| || ||| |||||| TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA 360 CACTGCAAGA CTCCACCACA ATCACCAGTC TCACAAGAAC CTCTACCAGC ACCGTCAAAG 43699 ||||| |||| |||||||||| |||||||||| | ||| | || |||| || || | | | |||| CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG 420 TTGCATTTAG TACGACCCCA TATACGTGCC ATCTTAGTGC CCCTCAGTGC ATTGATGGTC 43759 ||||| || |||||||||| |||||||||| |||||||| | ||||| | || ||||||| | TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC 480 CAAGTCTGGC CTTGATTGAG AC 43781 || || |||| || ||||||| || CATGTTTGGC CTCGATTGAG AC 502 hqPGS_C08HBa0235H18.1+_SGN-E212383- (43280 43781) ******************************************************************************** EST sequence 565 -strand 655 n (File: SGN-E305774-) 1 GACAAGTAAA AGTACTTGTT GGATCGTCTT GAGGATAACT ATAGGCATCG GGACATCTTT 61 GTTTGAAAAA TCTTGACAAA TCGGTAGGAC CACATGGACC TTGAGTGCAA CAATATTGTT 121 GTCCTCCGAA TGTAGTACAA GGGTTGTTAC ATCCTCCGGG TACCCTAAGT GAACCAGGGC 181 ATTCACCGTT TATATTAGCA ACACATTGAA TTGGATGACA TTTTCCCGGC CCAGGGTTAG 241 TTGGGCCGAA AGACATAGGG ATGTTGAATC CATCAATAAC AGAAATGTCC CAGAAATCTA 301 AGTTGCTAAA TTGATTCAAA GCGTATTCAG CTAAGGTGTT TGGTGGTTTA CCCCATCCTT 361 TGCATTCCAA GACTCCACCA CAATCACCGG TCTGGCACCA ACCTCTACCA GCACCATCAA 421 AATTGCAATT AGTACGACCC CAAATACGTG CCATTTTGGT GCCCGGTGGA GCCCAAAACC 481 ACCAACTTTG ACCTCTCTCG AGACGTCGGC CACCTCCTAC GGGAGTCGCC GCTGCCCATA 541 CGGTGTATGG ACAGTTGTTA TGGACCTCAA ATACACCGGA AGCATAAGTG TAAGTCACAA 601 AGGCAAGGAG AAACAACACT AAACAAGTTG TCAAATGACT CATTATAGAA TAAAA Predicted gene structure (within gDNA segment 41732 to 46692): Exon 1 43280 43781 ( 502 n); cDNA 3 504 ( 502 n); score: 0.793 MATCH C08HBa0235H18.1+ SGN-E305774- 0.793 502 0.766 C PGS_C08HBa0235H18.1+_SGN-E305774- (43280 43781) Alignment (genomic DNA sequence = upper lines): CAAGCAAATG TGCTAGTAGC ATCATCTTGT GGGTAGCTAT AGGCATCAGG GCATCTCTGT 43339 |||| ||| | | || || | ||| ||||| || || |||| ||||||| || ||||| ||| CAAGTAAAAG TACTTGTTGG ATCGTCTTGA GGATAACTAT AGGCATCGGG ACATCTTTGT 62 TTGAAAAATT TCGACCACTC AGTAGGACTA CATGGACCTT GGGTGCAACA ATATTGTTGT 43399 ||||||||| | ||| | || ||||||| | |||||||||| | |||||||| |||||||||| TTGAAAAATC TTGACAAATC GGTAGGACCA CATGGACCTT GAGTGCAACA ATATTGTTGT 122 CCTCCAAACG TGGTACAAGG ATTGTTACAT CCTCCGGTTA CTTTAAGTTG ACTAGGGCAT 43459 ||||| || | | |||||||| ||||||||| ||||||| || | ||||| || ||||||| CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA CCCTAAGTGA ACCAGGGCAT 182 TCACCGTTTA TATTGGCGGT GCATTGAATT GAGTGGCATT TTCCTCCACT GGAATTGGTT 43519 |||||||||| |||| || ||||||||| | || |||| |||| | | || ||| TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT TTCCCGGCCC AGGGTTAGTT 242 GTGGCGAAAG TCATCGGTAT ATTAAATCCA TCGACTAAAG AAATGTCCCA GAAATCTAGG 43579 | | |||||| ||| || || || |||||| || | | || |||||||||| |||||||| | GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG AAATGTCCCA GAAATCTAAG 302 TTGTTAAACT GGTTCAAGGC GTATTCGGTC AAGGTGTTTG GCGGTTTACC CCACCCGGTA 43639 ||| |||| | | ||||| || |||||| | |||||||||| | |||||||| ||| || | TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG GTGGTTTACC CCATCCTTTG 362 CACTGCAAGA CTCCACCACA ATCACCAGTC TCACAAGAAC CTCTACCAGC ACCGTCAAAG 43699 || | ||||| |||||||||| |||||| ||| | || ||| |||||||||| ||| ||||| CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC CTCTACCAGC ACCATCAAAA 422 TTGCATTTAG TACGACCCCA TATACGTGCC ATCTTAGTGC CCCTCAGTGC ATTGATGGTC 43759 ||||| |||| |||||||||| ||||||||| || || |||| || | || | | TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC CCGGTGGAGC CCAAAACCAC 482 CAAGTCTGGC CTTGATTGAG AC 43781 ||| | || | || | ||| || CAACTTTGAC CTCTCTCGAG AC 504 hqPGS_C08HBa0235H18.1+_SGN-E305774- (43280 43781) ******************************************************************************** EST sequence 740 -strand 604 n (File: SGN-E255554-) 1 GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 61 AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 121 CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 181 CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 241 GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 301 CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 361 TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 421 CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT 481 GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG 541 TATGGACAGT TGTTGCGTAC CTCAATAGTG GCAGCATAAG TATAAGTCAC ACAAAGAAGG 601 AAGA Predicted gene structure (within gDNA segment 41899 to 45827): Exon 1 43285 43781 ( 497 n); cDNA 3 499 ( 497 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E255554- 0.863 497 0.823 C PGS_C08HBa0235H18.1+_SGN-E255554- (43285 43781) Alignment (genomic DNA sequence = upper lines): AAATGTGCTA GTAGCATCAT CTTGTGGGTA GCTATAGGCA TCAGGGCATC TCTGTTTGAA 43344 ||||||||| |||| ||| | |||||||||| |||||| ||| || || |||| | | ||||| AAATGTGCTT GTAGGATCGT CTTGTGGGTA GCTATAAGCA TCGGGACATC TTTTCTTGAA 62 AAATTTCGAC CACTCAGTAG GACTACATGG ACCTTGGGTG CAACAATATT GTTGTCCTCC 43404 |||||| ||| |||| |||| | | |||||| |||||||||| |||||||||| |||||||||| AAATTTGGAC AACTCTGTAG GGCCACATGG ACCTTGGGTG CAACAATATT GTTGTCCTCC 122 AAACGTGGTA CAAGGATTGT TACATCCTCC GGTTACTTTA AGTTGACTAG GGCATTCACC 43464 |||||||||| ||||| |||| |||||||||| | ||| ||| || | || | |||||||| AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC 182 GTTTATATTG GCGGTGCATT GAATTGAGTG GCATTTTCCT CCACTGGAAT TGGTTGTGGC 43524 ||||||||| || ||||| | |||||| ||| ||||||||| ||||| | | | |||| ||| ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 242 GAAAGTCATC GGTATATTAA ATCCATCGAC TAAAGAAATG TCCCAGAAAT CTAGGTTGTT 43584 |||||||| || ||||||| |||||||||| |||||||||| ||||| |||| ||| |||| | AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 302 AAACTGGTTC AAGGCGTATT CGGTCAAGGT GTTTGGCGGT TTACCCCACC CGGTACACTG 43644 |||||||| | |||||||| | ||| | ||| |||||| ||| || ||||| | |||||||||| AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 362 CAAGACTCCA CCACAATCAC CAGTCTCACA AGAACCTCTA CCAGCACCGT CAAAGTTGCA 43704 ||||||||| |||||||||| |||||| ||| | |||||| || ||| | | ||||||||| TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 422 TTTAGTACGA CCCCATATAC GTGCCATCTT AGTGCCCCTC AGTGCATTGA TGGTCCAAGT 43764 ||||||| |||||||||| |||||||||| ||| |||||| | ||||||| || ||| || ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 482 CTGGCCTTGA TTGAGAC 43781 |||||| || ||||||| TTGGCCTCGA TTGAGAC 499 hqPGS_C08HBa0235H18.1+_SGN-E255554- (43285 43781) ******************************************************************************** EST sequence 847 -strand 624 n (File: SGN-E307742-) 1 GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 61 AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 121 CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 181 CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 241 GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 301 CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 361 TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 421 CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT 481 GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG 541 TATGGACAGT TGTTGCGTAC CTCAATAGTG GCAGCATAAG TATAAGTCAC ACAAAGAAGG 601 AAGAAGAGAA CAAAAGAAGA TGTC Predicted gene structure (within gDNA segment 41899 to 46027): Exon 1 43285 43781 ( 497 n); cDNA 3 499 ( 497 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E307742- 0.863 497 0.796 C PGS_C08HBa0235H18.1+_SGN-E307742- (43285 43781) Alignment (genomic DNA sequence = upper lines): AAATGTGCTA GTAGCATCAT CTTGTGGGTA GCTATAGGCA TCAGGGCATC TCTGTTTGAA 43344 ||||||||| |||| ||| | |||||||||| |||||| ||| || || |||| | | ||||| AAATGTGCTT GTAGGATCGT CTTGTGGGTA GCTATAAGCA TCGGGACATC TTTTCTTGAA 62 AAATTTCGAC CACTCAGTAG GACTACATGG ACCTTGGGTG CAACAATATT GTTGTCCTCC 43404 |||||| ||| |||| |||| | | |||||| |||||||||| |||||||||| |||||||||| AAATTTGGAC AACTCTGTAG GGCCACATGG ACCTTGGGTG CAACAATATT GTTGTCCTCC 122 AAACGTGGTA CAAGGATTGT TACATCCTCC GGTTACTTTA AGTTGACTAG GGCATTCACC 43464 |||||||||| ||||| |||| |||||||||| | ||| ||| || | || | |||||||| AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC 182 GTTTATATTG GCGGTGCATT GAATTGAGTG GCATTTTCCT CCACTGGAAT TGGTTGTGGC 43524 ||||||||| || ||||| | |||||| ||| ||||||||| ||||| | | | |||| ||| ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 242 GAAAGTCATC GGTATATTAA ATCCATCGAC TAAAGAAATG TCCCAGAAAT CTAGGTTGTT 43584 |||||||| || ||||||| |||||||||| |||||||||| ||||| |||| ||| |||| | AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 302 AAACTGGTTC AAGGCGTATT CGGTCAAGGT GTTTGGCGGT TTACCCCACC CGGTACACTG 43644 |||||||| | |||||||| | ||| | ||| |||||| ||| || ||||| | |||||||||| AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 362 CAAGACTCCA CCACAATCAC CAGTCTCACA AGAACCTCTA CCAGCACCGT CAAAGTTGCA 43704 ||||||||| |||||||||| |||||| ||| | |||||| || ||| | | ||||||||| TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 422 TTTAGTACGA CCCCATATAC GTGCCATCTT AGTGCCCCTC AGTGCATTGA TGGTCCAAGT 43764 ||||||| |||||||||| |||||||||| ||| |||||| | ||||||| || ||| || ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 482 CTGGCCTTGA TTGAGAC 43781 |||||| || ||||||| TTGGCCTCGA TTGAGAC 499 hqPGS_C08HBa0235H18.1+_SGN-E307742- (43285 43781) ******************************************************************************** EST sequence 939 -strand 629 n (File: SGN-E276027-) 1 GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 61 AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 121 CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 181 CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 241 GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 301 CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 361 TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 421 CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT 481 GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG 541 TATGGACAGT TGTTGCGTAC CTCAATAGTG GCAGCATAAG TATAAGTCAC ACAAAGAAGG 601 AAGAAGAGAA CAAAAGAAGA TGTCAAGTA Predicted gene structure (within gDNA segment 41899 to 46077): Exon 1 43285 43781 ( 497 n); cDNA 3 499 ( 497 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E276027- 0.863 497 0.790 C PGS_C08HBa0235H18.1+_SGN-E276027- (43285 43781) Alignment (genomic DNA sequence = upper lines): AAATGTGCTA GTAGCATCAT CTTGTGGGTA GCTATAGGCA TCAGGGCATC TCTGTTTGAA 43344 ||||||||| |||| ||| | |||||||||| |||||| ||| || || |||| | | ||||| AAATGTGCTT GTAGGATCGT CTTGTGGGTA GCTATAAGCA TCGGGACATC TTTTCTTGAA 62 AAATTTCGAC CACTCAGTAG GACTACATGG ACCTTGGGTG CAACAATATT GTTGTCCTCC 43404 |||||| ||| |||| |||| | | |||||| |||||||||| |||||||||| |||||||||| AAATTTGGAC AACTCTGTAG GGCCACATGG ACCTTGGGTG CAACAATATT GTTGTCCTCC 122 AAACGTGGTA CAAGGATTGT TACATCCTCC GGTTACTTTA AGTTGACTAG GGCATTCACC 43464 |||||||||| ||||| |||| |||||||||| | ||| ||| || | || | |||||||| AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC 182 GTTTATATTG GCGGTGCATT GAATTGAGTG GCATTTTCCT CCACTGGAAT TGGTTGTGGC 43524 ||||||||| || ||||| | |||||| ||| ||||||||| ||||| | | | |||| ||| ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 242 GAAAGTCATC GGTATATTAA ATCCATCGAC TAAAGAAATG TCCCAGAAAT CTAGGTTGTT 43584 |||||||| || ||||||| |||||||||| |||||||||| ||||| |||| ||| |||| | AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 302 AAACTGGTTC AAGGCGTATT CGGTCAAGGT GTTTGGCGGT TTACCCCACC CGGTACACTG 43644 |||||||| | |||||||| | ||| | ||| |||||| ||| || ||||| | |||||||||| AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 362 CAAGACTCCA CCACAATCAC CAGTCTCACA AGAACCTCTA CCAGCACCGT CAAAGTTGCA 43704 ||||||||| |||||||||| |||||| ||| | |||||| || ||| | | ||||||||| TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 422 TTTAGTACGA CCCCATATAC GTGCCATCTT AGTGCCCCTC AGTGCATTGA TGGTCCAAGT 43764 ||||||| |||||||||| |||||||||| ||| |||||| | ||||||| || ||| || ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 482 CTGGCCTTGA TTGAGAC 43781 |||||| || ||||||| TTGGCCTCGA TTGAGAC 499 hqPGS_C08HBa0235H18.1+_SGN-E276027- (43285 43781) ******************************************************************************** EST sequence 688 -strand 426 n (File: SGN-E203547-) 1 GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 61 AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 121 CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 181 CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 241 GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 301 CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 361 TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG 421 CAACCA Predicted gene structure (within gDNA segment 41899 to 45559): Exon 1 43285 43704 ( 420 n); cDNA 3 422 ( 420 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E203547- 0.864 420 0.986 C PGS_C08HBa0235H18.1+_SGN-E203547- (43285 43704) Alignment (genomic DNA sequence = upper lines): AAATGTGCTA GTAGCATCAT CTTGTGGGTA GCTATAGGCA TCAGGGCATC TCTGTTTGAA 43344 ||||||||| |||| ||| | |||||||||| |||||| ||| || || |||| | | ||||| AAATGTGCTT GTAGGATCGT CTTGTGGGTA GCTATAAGCA TCGGGACATC TTTTCTTGAA 62 AAATTTCGAC CACTCAGTAG GACTACATGG ACCTTGGGTG CAACAATATT GTTGTCCTCC 43404 |||||| ||| |||| |||| | | |||||| |||||||||| |||||||||| |||||||||| AAATTTGGAC AACTCTGTAG GGCCACATGG ACCTTGGGTG CAACAATATT GTTGTCCTCC 122 AAACGTGGTA CAAGGATTGT TACATCCTCC GGTTACTTTA AGTTGACTAG GGCATTCACC 43464 |||||||||| ||||| |||| |||||||||| | ||| ||| || | || | |||||||| AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC 182 GTTTATATTG GCGGTGCATT GAATTGAGTG GCATTTTCCT CCACTGGAAT TGGTTGTGGC 43524 ||||||||| || ||||| | |||||| ||| ||||||||| ||||| | | | |||| ||| ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 242 GAAAGTCATC GGTATATTAA ATCCATCGAC TAAAGAAATG TCCCAGAAAT CTAGGTTGTT 43584 |||||||| || ||||||| |||||||||| |||||||||| ||||| |||| ||| |||| | AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 302 AAACTGGTTC AAGGCGTATT CGGTCAAGGT GTTTGGCGGT TTACCCCACC CGGTACACTG 43644 |||||||| | |||||||| | ||| | ||| |||||| ||| || ||||| | |||||||||| AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 362 CAAGACTCCA CCACAATCAC CAGTCTCACA AGAACCTCTA CCAGCACCGT CAAAGTTGCA 43704 ||||||||| |||||||||| |||||| ||| | |||||| || ||| | | ||||||||| TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 422 hqPGS_C08HBa0235H18.1+_SGN-E203547- (43285 43704) ******************************************************************************** EST sequence 725 -strand 367 n (File: SGN-E301453-) 1 GTAAATGTGC TTGTAGGATC GTCTTGTGGG TAGCTATAAG CATCGGGACA TCTTTTCTTG 61 AAAAATTTGG ACAACTCTGT AGGGCCACAT GGACCTTGGG TGCAACAATA TTGTTGTCCT 121 CCAAACGTGG TACAAGGGTT GTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA 181 CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG 241 GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG 301 CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC 361 TGTAAGA Predicted gene structure (within gDNA segment 41899 to 44969): Exon 1 43285 43649 ( 365 n); cDNA 3 367 ( 365 n); score: 0.866 MATCH C08HBa0235H18.1+ SGN-E301453- 0.866 365 0.995 C PGS_C08HBa0235H18.1+_SGN-E301453- (43285 43649) Alignment (genomic DNA sequence = upper lines): AAATGTGCTA GTAGCATCAT CTTGTGGGTA GCTATAGGCA TCAGGGCATC TCTGTTTGAA 43344 ||||||||| |||| ||| | |||||||||| |||||| ||| || || |||| | | ||||| AAATGTGCTT GTAGGATCGT CTTGTGGGTA GCTATAAGCA TCGGGACATC TTTTCTTGAA 62 AAATTTCGAC CACTCAGTAG GACTACATGG ACCTTGGGTG CAACAATATT GTTGTCCTCC 43404 |||||| ||| |||| |||| | | |||||| |||||||||| |||||||||| |||||||||| AAATTTGGAC AACTCTGTAG GGCCACATGG ACCTTGGGTG CAACAATATT GTTGTCCTCC 122 AAACGTGGTA CAAGGATTGT TACATCCTCC GGTTACTTTA AGTTGACTAG GGCATTCACC 43464 |||||||||| ||||| |||| |||||||||| | ||| ||| || | || | |||||||| AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC 182 GTTTATATTG GCGGTGCATT GAATTGAGTG GCATTTTCCT CCACTGGAAT TGGTTGTGGC 43524 ||||||||| || ||||| | |||||| ||| ||||||||| ||||| | | | |||| ||| ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 242 GAAAGTCATC GGTATATTAA ATCCATCGAC TAAAGAAATG TCCCAGAAAT CTAGGTTGTT 43584 |||||||| || ||||||| |||||||||| |||||||||| ||||| |||| ||| |||| | AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 302 AAACTGGTTC AAGGCGTATT CGGTCAAGGT GTTTGGCGGT TTACCCCACC CGGTACACTG 43644 |||||||| | |||||||| | ||| | ||| |||||| ||| || ||||| | |||||||||| AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 362 CAAGA 43649 |||| TAAGA 367 hqPGS_C08HBa0235H18.1+_SGN-E301453- (43285 43649) ******************************************************************************** EST sequence 1002 -strand 463 n (File: SGN-E354546-) 1 AGTAGGATCA TCTGTGGGTA GCTATACGCA TCAGGACATC TTGTTTGAAA AATCTCGACA 61 AATCAGTAGG GCCACATGGA CCTTGTGTGC AACAATATTG TTGTCCTCCG AACGTGGTAC 121 AAGGATTGTT ACATCCTCCG GGGTACCCTA AGTGAACCAG GACATTCACC ATTTATATTA 181 GCCGTACAAT GAATTGCATG GCATTTCCCT CCACTAGGAT TGGTCGGGGC GAAAGTCATT 241 GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAGAAAT CTAGGTTGCT AAACTGGTCC 301 AAGGCGTACT CGGCCAGGGT GTTTGGTGGT TTGCCCCACC CGGTACATTG CAAGACCCCA 361 CCACAATCAC CAGTCTGACA TGAACCTCTA CCAGCACCAT CAAAGTTGCA ATTCGTACGA 421 CCCCATATAC GTGCCATCTT AGTGCCCCTC GGTGCATTGA TGA Predicted gene structure (within gDNA segment 41912 to 44474): Exon 1 43294 43756 ( 463 n); cDNA 1 462 ( 462 n); score: 0.891 MATCH C08HBa0235H18.1+ SGN-E354546- 0.891 463 1.000 C PGS_C08HBa0235H18.1+_SGN-E354546- (43294 43756) Alignment (genomic DNA sequence = upper lines): AGTAGCATCA TCTTGTGGGT AGCTATAGGC ATCAGGGCAT CTCTGTTTGA AAAATTTCGA 43353 ||||| |||| || ||||||| ||||||| || |||||| ||| || ||||||| ||||| |||| AGTAGGATCA TC-TGTGGGT AGCTATACGC ATCAGGACAT CT-TGTTTGA AAAATCTCGA 58 CCACTCAGTA GGACTACATG GACCTTGGGT GCAACAATAT TGTTGTCCTC CAAACGTGGT 43413 | | |||||| || | ||||| ||||||| || |||||||||| |||||||||| | |||||||| CAAATCAGTA GGGCCACATG GACCTTGTGT GCAACAATAT TGTTGTCCTC CGAACGTGGT 118 ACAAGGATTG TTACATCCTC C-GGTTACTT TAAGTTGACT AGGGCATTCA CCGTTTATAT 43472 |||||||||| |||||||||| | || ||| ||||| || ||| |||||| || ||||||| ACAAGGATTG TTACATCCTC CGGGGTACCC TAAGTGAACC AGGACATTCA CCATTTATAT 178 TGGCGGTGCA TTGAATTGAG TGGCATTTTC CTCCACTGGA ATTGGTTGTG GCGAAAGTCA 43532 | || || || ||||||| |||||||| | ||||||| | |||||| | | |||||||||| TAGCCGTACA ATGAATTGCA TGGCATTTCC CTCCACTAGG ATTGGTCGGG GCGAAAGTCA 238 TCGGTATATT AAATCCATCG ACTAAAGAAA TGTCCCAGAA ATCTAGGTTG TTAAACTGGT 43592 | || ||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| TTGGAATATT AAATCCATCG ACTAAAGAAA TGTCCCAGAA ATCTAGGTTG CTAAACTGGT 298 TCAAGGCGTA TTCGGTCAAG GTGTTTGGCG GTTTACCCCA CCCGGTACAC TGCAAGACTC 43652 ||||||||| |||| || | |||||||| | |||| ||||| ||||||||| |||||||| | CCAAGGCGTA CTCGGCCAGG GTGTTTGGTG GTTTGCCCCA CCCGGTACAT TGCAAGACCC 358 CACCACAATC ACCAGTCTCA CAAGAACCTC TACCAGCACC GTCAAAGTTG CATTTAGTAC 43712 |||||||||| |||||||| | || ||||||| |||||||||| ||||||||| || || |||| CACCACAATC ACCAGTCTGA CATGAACCTC TACCAGCACC ATCAAAGTTG CAATTCGTAC 418 GACCCCATAT ACGTGCCATC TTAGTGCCCC TCAGTGCATT GATG 43756 |||||||||| |||||||||| |||||||||| || ||||||| |||| GACCCCATAT ACGTGCCATC TTAGTGCCCC TCGGTGCATT GATG 462 hqPGS_C08HBa0235H18.1+_SGN-E354546- (43294 43756) ******************************************************************************** EST sequence 978 -strand 389 n (File: SGN-E206738-) 1 TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT TTTCTTGAAA AATTTGGACA 61 ACTCTGTAGG GCCACATGGA CATTGGGTGC AACAATATTG TTGTCCTCCA AACGTGGTAC 121 AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG ACATTCACCA TTTATATTGC 181 CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT TGTTGGGGCA AAAGTCATTG 241 GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA AACTGGTCCA 301 AGGCGTACTC GGTTAGGGTG TTTGGGGGTT TGCCCCATCC GGTACACTGT AAGACTCCAC 361 CACAATCACC AGTGTGACAT GTACCTCTG Predicted gene structure (within gDNA segment 41948 to 45319): Exon 1 43296 43683 ( 388 n); cDNA 1 388 ( 388 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E206738- 0.863 388 0.997 C PGS_C08HBa0235H18.1+_SGN-E206738- (43296 43683) Alignment (genomic DNA sequence = upper lines): TAGCATCATC TTGTGGGTAG CTATAGGCAT CAGGGCATCT CTGTTTGAAA AATTTCGACC 43355 ||| ||| || |||||||||| ||||| |||| | || ||||| | |||||| ||||| ||| TAGGATCGTC TTGTGGGTAG CTATAAGCAT CGGGACATCT TTTCTTGAAA AATTTGGACA 60 ACTCAGTAGG ACTACATGGA CCTTGGGTGC AACAATATTG TTGTCCTCCA AACGTGGTAC 43415 |||| ||||| | ||||||| | |||||||| |||||||||| |||||||||| |||||||||| ACTCTGTAGG GCCACATGGA CATTGGGTGC AACAATATTG TTGTCCTCCA AACGTGGTAC 120 AAGGATTGTT ACATCCTCCG GTTACTTTAA GTTGACTAGG GCATTCACCG TTTATATTGG 43475 |||| ||||| ||||||||| | ||| |||| | | ||| |||||||| ||||||||| AAGGGTTGTT ACATCCTCCA GGTACCTTAA GGGCGCGAGG ACATTCACCA TTTATATTGC 180 CGGTGCATTG AATTGAGTGG CATTTTCCTC CACTGGAATT GGTTGTGGCG AAAGTCATCG 43535 | ||||| || ||||| ||| |||||||||| |||| | || |||| ||| |||||||| | CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT TGTTGGGGCA AAAGTCATTG 240 GTATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC TAGGTTGTTA AACTGGTTCA 43595 | |||||||| |||||||||| |||||||||| |||| ||||| || |||| || ||||||| || GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA AACTGGTCCA 300 AGGCGTATTC GGTCAAGGTG TTTGGCGGTT TACCCCACCC GGTACACTGC AAGACTCCAC 43655 ||||||| || ||| | |||| ||||| |||| | ||||| || ||||||||| |||||||||| AGGCGTACTC GGTTAGGGTG TTTGGGGGTT TGCCCCATCC GGTACACTGT AAGACTCCAC 360 CACAATCACC AGTCTCACAA GAACCTCT 43683 |||||||||| ||| | ||| | |||||| CACAATCACC AGTGTGACAT GTACCTCT 388 hqPGS_C08HBa0235H18.1+_SGN-E206738- (43296 43683) ******************************************************************************** EST sequence 1193 -strand 619 n (File: SGN-E209843-) 1 TAACTATAGG CATCGGGACA TCTTTGTTTG AAAAATCTTG ACAAATCGGT AGGACCACAT 61 GGACCTTGAG TGCAACAATA TTGTTGTCCT CCGAATGTAG TACAAGGGTT GTTACATCCT 121 CCGGGTACCC TAAGTGAACC AGGGCATTCA CCGTTTATAT TAGCAACACA TTGAATTGGA 181 TGACATTTTC CCGGCCCAGG GTTAGTTGGG CCGAAAGACA TAGGGATGTT GAATCCATCA 241 ATAACAGAAA TGTCCCAGAA ATCTAAGTTG CTAAATTGAT TCAAAGCGTA TTCAGCTAAG 301 GTGTTTGGTG GTTTACCCCA TCCTTTGCAT TCCAAGACTC CACCACAATC ACCGGTCTGG 361 CACCAACCTC TACCAGCACC ATCAAAATTG CAATTAGTAC GACCCCAAAT ACGTGCCATT 421 TTGGTGCCCG GTGGAGCCCA AAACCACCAA CTTTGACCTC TCTCGAGACG TCGGCCACCT 481 CCTACGGGAG TCGCCGCTGC CCATACGGTG TATGGACAGT TGTTATGGAC CTCAAATACA 541 CCGGAAGCAT AAGTGTAAGT CACAAAGGCA AGGAGAAAGA ACACTAAACA AGTTGTCAAA 601 TGACTCATTT TAGAATAAA Predicted gene structure (within gDNA segment 42082 to 46682): Exon 1 43313 43781 ( 469 n); cDNA 1 469 ( 469 n); score: 0.797 MATCH C08HBa0235H18.1+ SGN-E209843- 0.797 469 0.758 C PGS_C08HBa0235H18.1+_SGN-E209843- (43313 43781) Alignment (genomic DNA sequence = upper lines): TAGCTATAGG CATCAGGGCA TCTCTGTTTG AAAAATTTCG ACCACTCAGT AGGACTACAT 43372 || ||||||| |||| || || ||| |||||| |||||| | | || | || || ||||| |||| TAACTATAGG CATCGGGACA TCTTTGTTTG AAAAATCTTG ACAAATCGGT AGGACCACAT 60 GGACCTTGGG TGCAACAATA TTGTTGTCCT CCAAACGTGG TACAAGGATT GTTACATCCT 43432 |||||||| | |||||||||| |||||||||| || || || | ||||||| || |||||||||| GGACCTTGAG TGCAACAATA TTGTTGTCCT CCGAATGTAG TACAAGGGTT GTTACATCCT 120 CCGGTTACTT TAAGTTGACT AGGGCATTCA CCGTTTATAT TGGCGGTGCA TTGAATTGAG 43492 |||| ||| ||||| || |||||||||| |||||||||| | || || |||||||| CCGGGTACCC TAAGTGAACC AGGGCATTCA CCGTTTATAT TAGCAACACA TTGAATTGGA 180 TGGCATTTTC CTCCACTGGA ATTGGTTGTG GCGAAAGTCA TCGGTATATT AAATCCATCG 43552 || ||||||| | | | || |||| | |||||| || | || || || |||||||| TGACATTTTC CCGGCCCAGG GTTAGTTGGG CCGAAAGACA TAGGGATGTT GAATCCATCA 240 ACTAAAGAAA TGTCCCAGAA ATCTAGGTTG TTAAACTGGT TCAAGGCGTA TTCGGTCAAG 43612 | | ||||| |||||||||| ||||| |||| |||| || | |||| ||||| ||| | ||| ATAACAGAAA TGTCCCAGAA ATCTAAGTTG CTAAATTGAT TCAAAGCGTA TTCAGCTAAG 300 GTGTTTGGCG GTTTACCCCA CCCGGTACAC TGCAAGACTC CACCACAATC ACCAGTCTCA 43672 |||||||| | |||||||||| || | || | |||||||| |||||||||| ||| |||| GTGTTTGGTG GTTTACCCCA TCCTTTGCAT TCCAAGACTC CACCACAATC ACCGGTCTGG 360 CAAGAACCTC TACCAGCACC GTCAAAGTTG CATTTAGTAC GACCCCATAT ACGTGCCATC 43732 || |||||| |||||||||| ||||| ||| || ||||||| ||||||| || ||||||||| CACCAACCTC TACCAGCACC ATCAAAATTG CAATTAGTAC GACCCCAAAT ACGTGCCATT 420 TTAGTGCCCC TCAGTGCATT GATGGTCCAA GTCTGGCCTT GATTGAGAC 43781 || |||||| | || | |||| | || ||| | ||||| TTGGTGCCCG GTGGAGCCCA AAACCACCAA CTTTGACCTC TCTCGAGAC 469 hqPGS_C08HBa0235H18.1+_SGN-E209843- (43313 43781) ******************************************************************************** EST sequence 482 -strand 530 n (File: SGN-E336261-) 1 ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 61 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 121 TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 181 TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 241 AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 301 TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT 361 ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT 421 TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT 481 CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA Predicted gene structure (within gDNA segment 42249 to 45437): Exon 1 43318 43781 ( 464 n); cDNA 1 464 ( 464 n); score: 0.860 MATCH C08HBa0235H18.1+ SGN-E336261- 0.860 464 0.875 C PGS_C08HBa0235H18.1+_SGN-E336261- (43318 43781) Alignment (genomic DNA sequence = upper lines): ATAGGCATCA GGGCATCTCT GTTTGAAAAA TTTCGACCAC TCAGTAGGAC TACATGGACC 43377 ||| ||||| || ||||| | |||||||| ||| ||| || || ||||| | ||||||||| ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 60 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGATTGTTAC ATCCTCCGGT 43437 |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| ||||||| | TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 120 TACTTTAAGT TGACTAGGGC ATTCACCGTT TATATTGGCG GTGCATTGAA TTGAGTGGCA 43497 ||| ||||| | ||| | ||||||| || ||||||||| ||||| |||| ||| ||| || TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 180 TTTTCCTCCA CTGGAATTGG TTGTGGCGAA AGTCATCGGT ATATTAAATC CATCGACTAA 43557 |||||||||| || | || | ||| ||| || |||||| || |||||||||| |||||||||| TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 240 AGAAATGTCC CAGAAATCTA GGTTGTTAAA CTGGTTCAAG GCGTATTCGG TCAAGGTGTT 43617 |||||||||| || ||||||| |||| |||| ||||| |||| ||||| |||| | |||||| AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 300 TGGCGGTTTA CCCCACCCGG TACACTGCAA GACTCCACCA CAATCACCAG TCTCACAAGA 43677 ||| ||||| ||||| |||| ||||||| || |||||||||| |||||||||| ||| ||| | TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT 360 ACCTCTACCA GCACCGTCAA AGTTGCATTT AGTACGACCC CATATACGTG CCATCTTAGT 43737 |||||| || ||| | | || ||||||| |||||||||| |||||||||| |||||||||| ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT 420 GCCCCTCAGT GCATTGATGG TCCAAGTCTG GCCTTGATTG AGAC 43781 |||||| | ||||||||| ||| || || |||| ||||| |||| TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG AGAC 464 hqPGS_C08HBa0235H18.1+_SGN-E336261- (43318 43781) ******************************************************************************** EST sequence 1091 -strand 283 n (File: SGN-E258498-) 1 ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 61 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 121 TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 181 TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 241 AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCG Predicted gene structure (within gDNA segment 42249 to 44479): Exon 1 43318 43600 ( 283 n); cDNA 1 283 ( 283 n); score: 0.866 MATCH C08HBa0235H18.1+ SGN-E258498- 0.866 283 1.000 C PGS_C08HBa0235H18.1+_SGN-E258498- (43318 43600) Alignment (genomic DNA sequence = upper lines): ATAGGCATCA GGGCATCTCT GTTTGAAAAA TTTCGACCAC TCAGTAGGAC TACATGGACC 43377 ||| ||||| || ||||| | |||||||| ||| ||| || || ||||| | ||||||||| ATAAGCATCG GGACATCTTT TCTTGAAAAA TTTGGACAAC TCTGTAGGGC CACATGGACC 60 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGATTGTTAC ATCCTCCGGT 43437 |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| ||||||| | TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 120 TACTTTAAGT TGACTAGGGC ATTCACCGTT TATATTGGCG GTGCATTGAA TTGAGTGGCA 43497 ||| ||||| | ||| | ||||||| || ||||||||| ||||| |||| ||| ||| || TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 180 TTTTCCTCCA CTGGAATTGG TTGTGGCGAA AGTCATCGGT ATATTAAATC CATCGACTAA 43557 |||||||||| || | || | ||| ||| || |||||| || |||||||||| |||||||||| TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 240 AGAAATGTCC CAGAAATCTA GGTTGTTAAA CTGGTTCAAG GCG 43600 |||||||||| || ||||||| |||| |||| ||||| |||| ||| AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCG 283 hqPGS_C08HBa0235H18.1+_SGN-E258498- (43318 43600) ******************************************************************************** EST sequence 788 -strand 264 n (File: SGN-E251433-) 1 TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT 61 TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 121 ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 181 TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 241 GAAATGTCCC AAAAATCTAA GTTG Predicted gene structure (within gDNA segment 42259 to 44299): Exon 1 43319 43582 ( 264 n); cDNA 1 264 ( 264 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E251433- 0.864 264 1.000 C PGS_C08HBa0235H18.1+_SGN-E251433- (43319 43582) Alignment (genomic DNA sequence = upper lines): TAGGCATCAG GGCATCTCTG TTTGAAAAAT TTCGACCACT CAGTAGGACT ACATGGACCT 43378 || ||||| | | ||||| | ||||||||| || ||| ||| | ||||| | |||||||||| TAAGCATCGG GACATCTTTT CTTGAAAAAT TTGGACAACT CTGTAGGGCC ACATGGACCT 60 TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GATTGTTACA TCCTCCGGTT 43438 |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| |||||| | | TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 120 ACTTTAAGTT GACTAGGGCA TTCACCGTTT ATATTGGCGG TGCATTGAAT TGAGTGGCAT 43498 || ||||| | ||| || |||||| ||| |||||||| | |||| ||||| || ||| ||| ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 180 TTTCCTCCAC TGGAATTGGT TGTGGCGAAA GTCATCGGTA TATTAAATCC ATCGACTAAA 43558 |||||||||| | | || || || ||| ||| ||||| || | |||||||||| |||||||||| TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 240 GAAATGTCCC AGAAATCTAG GTTG 43582 |||||||||| | ||||||| |||| GAAATGTCCC AAAAATCTAA GTTG 264 hqPGS_C08HBa0235H18.1+_SGN-E251433- (43319 43582) ******************************************************************************** EST sequence 461 -strand 583 n (File: SGN-E211899-) 1 AAGCATCGGG ACATCTTTTC TTGAAAAATT TGGACAACTC TGTAGGGCCA CATGGACTTT 61 GGGTGCAACA ATATTGTNGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 121 CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 181 TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 241 AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 301 GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 361 CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 421 CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 481 GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT 541 AAGTATAAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA AGA Predicted gene structure (within gDNA segment 42188 to 45987): Exon 1 43322 43781 ( 460 n); cDNA 3 462 ( 460 n); score: 0.857 MATCH C08HBa0235H18.1+ SGN-E211899- 0.857 460 0.789 C PGS_C08HBa0235H18.1+_SGN-E211899- (43322 43781) Alignment (genomic DNA sequence = upper lines): GCATCAGGGC ATCTCTGTTT GAAAAATTTC GACCACTCAG TAGGACTACA TGGACCTTGG 43381 ||||| || | |||| | || ||||||||| ||| |||| | |||| | ||| ||||| |||| GCATCGGGAC ATCTTTTCTT GAAAAATTTG GACAACTCTG TAGGGCCACA TGGACTTTGG 62 GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGAT TGTTACATCC TCCGGTTACT 43441 |||||||||| ||||| |||| |||||||||| |||||||| | |||||||||| ||| | ||| GTGCAACAAT ATTGTNGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC 122 TTAAGTTGAC TAGGGCATTC ACCGTTTATA TTGGCGGTGC ATTGAATTGA GTGGCATTTT 43501 ||||| | ||| ||||| ||| |||||| ||||| |||| | ||||||| ||| |||||| TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT 182 CCTCCACTGG AATTGGTTGT GGCGAAAGTC ATCGGTATAT TAAATCCATC GACTAAAGAA 43561 |||||||| | || |||| ||| |||||| || || |||| |||||||||| |||||||||| CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 242 ATGTCCCAGA AATCTAGGTT GTTAAACTGG TTCAAGGCGT ATTCGGTCAA GGTGTTTGGC 43621 |||||||| | |||||| ||| | |||||||| | |||||||| | |||| | ||||||||| ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG 302 GGTTTACCCC ACCCGGTACA CTGCAAGACT CCACCACAAT CACCAGTCTC ACAAGAACCT 43681 ||||| |||| | |||||||| ||| |||||| |||||||||| ||||||||| ||| | |||| GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT 362 CTACCAGCAC CGTCAAAGTT GCATTTAGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC 43741 || || ||| | | |||||| ||| |||| |||||||||| |||||||||| |||||| ||| CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC 422 CTCAGTGCAT TGATGGTCCA AGTCTGGCCT TGATTGAGAC 43781 ||| | |||| ||||| ||| || |||||| ||||||||| CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC 462 hqPGS_C08HBa0235H18.1+_SGN-E211899- (43322 43781) ******************************************************************************** EST sequence 954 -strand 597 n (File: SGN-E207039-) 1 TGTTTGAAAA AATCTTGACA AATCGGTAGG ACCACATGGA CCTTAAGTGC AACAATATTG 61 TTGTCCTCCG AATGTAGTAC AAGGGTTGTT ACATCCTCCG GGTACCCTAA GTGAACCAGG 121 GCATTCACCG TTTATATTAG CAACACATTG AATTGGATGA CATTTTCCCG GCCCAGGGTT 181 AGTTGGGCCG AAAGACATAG GGATGTTGAA TCCATCAATA ACAGAAATGT CCCAGAAATC 241 TAAGTTGCTA AATTGATTCA AAGCGTATTC AGCTAAGGTG TTTGGTGGTT TACCCCATCC 301 TTTGCATTCC AAGACTCCAC CACAATCACC GGTCTGGCAC CAACCTCTAC CAGCACCATC 361 AAAATTGCAA TTAGTACGAC CCCAAATACG TGCCATTTTG GTGCCCGGTG GAGCCCAAAA 421 CCACCAACTT TGACCTCTCT CGAGACGTCG GCCACCTCCT ACGGGAGTCG CCGCTGCCCA 481 TACGGTGTAT GGACAGTTGT TATGGACCTC AAATACACCG GAAGCATAAG TGTAAGTCAC 541 AAAGGCAAGG AGAAAGAACA CTAAACAAGT TGTCAAATGA CTCATTTTAG AATAAAA Predicted gene structure (within gDNA segment 42312 to 46692): Exon 1 43337 43781 ( 445 n); cDNA 1 446 ( 446 n); score: 0.788 MATCH C08HBa0235H18.1+ SGN-E207039- 0.788 445 0.745 C PGS_C08HBa0235H18.1+_SGN-E207039- (43337 43781) Alignment (genomic DNA sequence = upper lines): TGTTTGAAA- AATTTCGACC ACTCAGTAGG ACTACATGGA CCTTGGGTGC AACAATATTG 43395 ||||||||| ||| | ||| | || ||||| || ||||||| |||| |||| |||||||||| TGTTTGAAAA AATCTTGACA AATCGGTAGG ACCACATGGA CCTTAAGTGC AACAATATTG 60 TTGTCCTCCA AACGTGGTAC AAGGATTGTT ACATCCTCCG GTTACTTTAA GTTGACTAGG 43455 ||||||||| || || |||| |||| ||||| |||||||||| | ||| ||| || || ||| TTGTCCTCCG AATGTAGTAC AAGGGTTGTT ACATCCTCCG GGTACCCTAA GTGAACCAGG 120 GCATTCACCG TTTATATTGG CGGTGCATTG AATTGAGTGG CATTTTCCTC CACTGGAATT 43515 |||||||||| |||||||| | | ||||| ||||| || |||||||| | | || GCATTCACCG TTTATATTAG CAACACATTG AATTGGATGA CATTTTCCCG GCCCAGGGTT 180 GGTTGTGGCG AAAGTCATCG GTATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC 43575 |||| | || |||| ||| | | || || || |||||| | | |||||||| |||||||||| AGTTGGGCCG AAAGACATAG GGATGTTGAA TCCATCAATA ACAGAAATGT CCCAGAAATC 240 TAGGTTGTTA AACTGGTTCA AGGCGTATTC GGTCAAGGTG TTTGGCGGTT TACCCCACCC 43635 || |||| || || || |||| | |||||||| | |||||| ||||| |||| ||||||| || TAAGTTGCTA AATTGATTCA AAGCGTATTC AGCTAAGGTG TTTGGTGGTT TACCCCATCC 300 GGTACACTGC AAGACTCCAC CACAATCACC AGTCTCACAA GAACCTCTAC CAGCACCGTC 43695 | || | | |||||||||| |||||||||| |||| || ||||||||| ||||||| || TTTGCATTCC AAGACTCCAC CACAATCACC GGTCTGGCAC CAACCTCTAC CAGCACCATC 360 AAAGTTGCAT TTAGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCA GTGCATTGAT 43755 ||| ||||| |||||||||| |||| ||||| |||||| || |||||| | || | AAAATTGCAA TTAGTACGAC CCCAAATACG TGCCATTTTG GTGCCCGGTG GAGCCCAAAA 420 GGTCCAAGTC TGGCCTTGAT TGAGAC 43781 |||| | || ||| | ||||| CCACCAACTT TGACCTCTCT CGAGAC 446 hqPGS_C08HBa0235H18.1+_SGN-E207039- (43337 43781) ******************************************************************************** EST sequence 865 -strand 584 n (File: SGN-E268610-) 1 GAAAAATCTT GACAAATCGG TAGGACCACA TGGACCTTGA GTGCAACAAT ATTGTTGTCC 61 TCCGAATGTA GTACAAGGGT TGTTACATCC TCCGGGTACC TTAAGTGAAC CAGGGCATTC 121 ACCGTTTATA TTAGCAACAC ATTGAATTGG ATGACATTTT CCCGGCCCAG GGTTAGTTGG 181 GCCGAAAGAC ATAGGGATGT TGAATCCATC AATAACAGAA ATGTCCCAGA AATCTAAGTT 241 GCTAAATTGA TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA 301 TTCCAAGACT CCACCACAAT CACCGGTCTG GCACCAACCT CTACCAGCAC CATCAAAATT 361 GCAATTAGTA CGACCCCAAA TACGTGCCAT TTTGGTGCCC GGTGGAGCCC AAAACCACCA 421 ACTTTGACCT CTCTCGAGAC GTCGGCCACC TCCTACGGGA GTCGCCGCTG CCCATACGGT 481 GTATGGACAG TTGTTATGGA CCTCAAATAC ACCGGAAGCA TAAGTGTAAG TCACAAAGCG 541 CAAGGAGAAA GAACACTAAA CAAGTTGTCA AATGACTCAT TTTA Predicted gene structure (within gDNA segment 42372 to 46622): Exon 1 43342 43781 ( 440 n); cDNA 1 440 ( 440 n); score: 0.795 MATCH C08HBa0235H18.1+ SGN-E268610- 0.795 440 0.753 C PGS_C08HBa0235H18.1+_SGN-E268610- (43342 43781) Alignment (genomic DNA sequence = upper lines): GAAAAATTTC GACCACTCAG TAGGACTACA TGGACCTTGG GTGCAACAAT ATTGTTGTCC 43401 ||||||| | ||| | || | |||||| ||| ||||||||| |||||||||| |||||||||| GAAAAATCTT GACAAATCGG TAGGACCACA TGGACCTTGA GTGCAACAAT ATTGTTGTCC 60 TCCAAACGTG GTACAAGGAT TGTTACATCC TCCGGTTACT TTAAGTTGAC TAGGGCATTC 43461 ||| || || |||||||| | |||||||||| ||||| ||| |||||| || ||||||||| TCCGAATGTA GTACAAGGGT TGTTACATCC TCCGGGTACC TTAAGTGAAC CAGGGCATTC 120 ACCGTTTATA TTGGCGGTGC ATTGAATTGA GTGGCATTTT CCTCCACTGG AATTGGTTGT 43521 |||||||||| || || | ||||||||| || |||||| || | | || |||| ACCGTTTATA TTAGCAACAC ATTGAATTGG ATGACATTTT CCCGGCCCAG GGTTAGTTGG 180 GGCGAAAGTC ATCGGTATAT TAAATCCATC GACTAAAGAA ATGTCCCAGA AATCTAGGTT 43581 | |||||| | || || || | | |||||||| | | |||| |||||||||| |||||| ||| GCCGAAAGAC ATAGGGATGT TGAATCCATC AATAACAGAA ATGTCCCAGA AATCTAAGTT 240 GTTAAACTGG TTCAAGGCGT ATTCGGTCAA GGTGTTTGGC GGTTTACCCC ACCCGGTACA 43641 | |||| || ||||| |||| |||| | || ||||||||| |||||||||| | || | || GCTAAATTGA TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT GGTTTACCCC ATCCTTTGCA 300 CTGCAAGACT CCACCACAAT CACCAGTCTC ACAAGAACCT CTACCAGCAC CGTCAAAGTT 43701 | ||||||| |||||||||| |||| |||| || ||||| |||||||||| | ||||| || TTCCAAGACT CCACCACAAT CACCGGTCTG GCACCAACCT CTACCAGCAC CATCAAAATT 360 GCATTTAGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC CTCAGTGCAT TGATGGTCCA 43761 ||| |||||| |||||||| | |||||||||| || |||||| | || | ||| GCAATTAGTA CGACCCCAAA TACGTGCCAT TTTGGTGCCC GGTGGAGCCC AAAACCACCA 420 AGTCTGGCCT TGATTGAGAC 43781 | | || ||| | ||||| ACTTTGACCT CTCTCGAGAC 440 hqPGS_C08HBa0235H18.1+_SGN-E268610- (43342 43781) ******************************************************************************** EST sequence 1111 -strand 561 n (File: SGN-E273742-) 1 GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 61 TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 121 CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 181 TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 241 TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA 301 TCACCAGTCT GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT 361 ATACGTGCCA TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA 421 CGTCGACCAC CGCCTATCGG AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT 481 ACCTCAATAG TGGCAGCATA AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA 541 GATGTCAAGT AGCCCATGTT T Predicted gene structure (within gDNA segment 42679 to 46177): Exon 1 43361 43781 ( 421 n); cDNA 1 421 ( 421 n); score: 0.867 MATCH C08HBa0235H18.1+ SGN-E273742- 0.867 421 0.750 C PGS_C08HBa0235H18.1+_SGN-E273742- (43361 43781) Alignment (genomic DNA sequence = upper lines): GTAGGACTAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGA 43420 ||||| | || |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| GTAGGGCCAC ATGGACCTTG GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG 60 TTGTTACATC CTCCGGTTAC TTTAAGTTGA CTAGGGCATT CACCGTTTAT ATTGGCGGTG 43480 |||||||||| |||| | ||| ||||| | ||| |||| |||| ||||| |||||| ||| TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 120 CATTGAATTG AGTGGCATTT TCCTCCACTG GAATTGGTTG TGGCGAAAGT CATCGGTATA 43540 || ||||||| ||| ||||| ||||||||| | || |||| ||| ||||| ||| || ||| CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 180 TTAAATCCAT CGACTAAAGA AATGTCCCAG AAATCTAGGT TGTTAAACTG GTTCAAGGCG 43600 |||||||||| |||||||||| ||||||||| ||||||| || || ||||||| || ||||||| TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 240 TATTCGGTCA AGGTGTTTGG CGGTTTACCC CACCCGGTAC ACTGCAAGAC TCCACCACAA 43660 || |||| | ||||||||| ||||| ||| || ||||||| |||| ||||| |||||||||| TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA 300 TCACCAGTCT CACAAGAACC TCTACCAGCA CCGTCAAAGT TGCATTTAGT ACGACCCCAT 43720 |||||||||| ||| | ||| ||| || ||| | | ||||| |||| ||| |||||||||| TCACCAGTCT GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT 360 ATACGTGCCA TCTTAGTGCC CCTCAGTGCA TTGATGGTCC AAGTCTGGCC TTGATTGAGA 43780 |||||||||| ||||||| || |||| | ||| |||||| || | || ||||| | |||||||| ATACGTGCCA TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA 420 C 43781 | C 421 hqPGS_C08HBa0235H18.1+_SGN-E273742- (43361 43781) ******************************************************************************** EST sequence 935 -strand 538 n (File: SGN-E206152-) 1 ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 61 TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 121 TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 181 ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 241 TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 301 CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC 361 CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 421 ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT 481 AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATGTC Predicted gene structure (within gDNA segment 42759 to 46027): Exon 1 43369 43781 ( 413 n); cDNA 1 413 ( 413 n); score: 0.869 MATCH C08HBa0235H18.1+ SGN-E206152- 0.869 413 0.768 C PGS_C08HBa0235H18.1+_SGN-E206152- (43369 43781) Alignment (genomic DNA sequence = upper lines): ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GATTGTTACA 43428 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 60 TCCTCCGGTT ACTTTAAGTT GACTAGGGCA TTCACCGTTT ATATTGGCGG TGCATTGAAT 43488 |||||| | | || ||||| | ||| || |||||| ||| |||||||| | |||| ||||| TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 120 TGAGTGGCAT TTTCCTCCAC TGGAATTGGT TGTGGCGAAA GTCATCGGTA TATTAAATCC 43548 || ||| ||| |||||||||| | | || || || ||| ||| ||||| || | |||||||||| TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 180 ATCGACTAAA GAAATGTCCC AGAAATCTAG GTTGTTAAAC TGGTTCAAGG CGTATTCGGT 43608 |||||||||| |||||||||| | ||||||| |||| ||||| |||| ||||| |||| |||| ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 240 CAAGGTGTTT GGCGGTTTAC CCCACCCGGT ACACTGCAAG ACTCCACCAC AATCACCAGT 43668 | ||||||| || ||||| | |||| ||||| |||||| ||| |||||||||| |||||||||| TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 300 CTCACAAGAA CCTCTACCAG CACCGTCAAA GTTGCATTTA GTACGACCCC ATATACGTGC 43728 || ||| | | ||||| || | || | | ||| |||||| | |||||||||| |||||||||| CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC 360 CATCTTAGTG CCCCTCAGTG CATTGATGGT CCAAGTCTGG CCTTGATTGA GAC 43781 ||||||||| |||||| | | |||||||| ||| || ||| ||| |||||| ||| CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GAC 413 hqPGS_C08HBa0235H18.1+_SGN-E206152- (43369 43781) ******************************************************************************** EST sequence 1064 -strand 551 n (File: SGN-E210488-) 1 ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 61 TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 121 TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 181 ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 241 TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 301 CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC 361 CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC 421 ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT 481 AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATGTCAA 541 GTAGCCCATG T Predicted gene structure (within gDNA segment 42759 to 46157): Exon 1 43369 43781 ( 413 n); cDNA 1 413 ( 413 n); score: 0.869 MATCH C08HBa0235H18.1+ SGN-E210488- 0.869 413 0.750 C PGS_C08HBa0235H18.1+_SGN-E210488- (43369 43781) Alignment (genomic DNA sequence = upper lines): ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GATTGTTACA 43428 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| ACATGGACCT TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA 60 TCCTCCGGTT ACTTTAAGTT GACTAGGGCA TTCACCGTTT ATATTGGCGG TGCATTGAAT 43488 |||||| | | || ||||| | ||| || |||||| ||| |||||||| | |||| ||||| TCCTCCAGGT ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT 120 TGAGTGGCAT TTTCCTCCAC TGGAATTGGT TGTGGCGAAA GTCATCGGTA TATTAAATCC 43548 || ||| ||| |||||||||| | | || || || ||| ||| ||||| || | |||||||||| TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC 180 ATCGACTAAA GAAATGTCCC AGAAATCTAG GTTGTTAAAC TGGTTCAAGG CGTATTCGGT 43608 |||||||||| |||||||||| | ||||||| |||| ||||| |||| ||||| |||| |||| ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC 240 CAAGGTGTTT GGCGGTTTAC CCCACCCGGT ACACTGCAAG ACTCCACCAC AATCACCAGT 43668 | ||||||| || ||||| | |||| ||||| |||||| ||| |||||||||| |||||||||| TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT 300 CTCACAAGAA CCTCTACCAG CACCGTCAAA GTTGCATTTA GTACGACCCC ATATACGTGC 43728 || ||| | | ||||| || | || | | ||| |||||| | |||||||||| |||||||||| CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC 360 CATCTTAGTG CCCCTCAGTG CATTGATGGT CCAAGTCTGG CCTTGATTGA GAC 43781 ||||||||| |||||| | | |||||||| ||| || ||| ||| |||||| ||| CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GAC 413 hqPGS_C08HBa0235H18.1+_SGN-E210488- (43369 43781) ******************************************************************************** EST sequence 1119 -strand 534 n (File: SGN-E288509-) 1 TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 61 TACCTTAGGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 121 TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 181 AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 241 TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT 301 ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT 361 TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGACTG AGACGTCGAC CACCGCCTAT 421 CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGCAGC 481 ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA GAAGATGTCA AGTA Predicted gene structure (within gDNA segment 42768 to 46077): Exon 1 43378 43781 ( 404 n); cDNA 1 404 ( 404 n); score: 0.861 MATCH C08HBa0235H18.1+ SGN-E288509- 0.861 404 0.757 C PGS_C08HBa0235H18.1+_SGN-E288509- (43378 43781) Alignment (genomic DNA sequence = upper lines): TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGATTGTTAC ATCCTCCGGT 43437 |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| ||||||| | TTGGGTGCAA CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG 60 TACTTTAAGT TGACTAGGGC ATTCACCGTT TATATTGGCG GTGCATTGAA TTGAGTGGCA 43497 ||| ||| | | ||| | ||||||| || ||||||||| ||||| |||| ||| ||| || TACCTTAGGG GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA 120 TTTTCCTCCA CTGGAATTGG TTGTGGCGAA AGTCATCGGT ATATTAAATC CATCGACTAA 43557 |||||||||| || | || | ||| ||| || |||||| || |||||||||| |||||||||| TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA 180 AGAAATGTCC CAGAAATCTA GGTTGTTAAA CTGGTTCAAG GCGTATTCGG TCAAGGTGTT 43617 |||||||||| || ||||||| |||| |||| ||||| |||| ||||| |||| | |||||| AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT 240 TGGCGGTTTA CCCCACCCGG TACACTGCAA GACTCCACCA CAATCACCAG TCTCACAAGA 43677 ||| ||||| ||||| |||| ||||||| || |||||||||| |||||||||| ||| ||| | TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT 300 ACCTCTACCA GCACCGTCAA AGTTGCATTT AGTACGACCC CATATACGTG CCATCTTAGT 43737 |||||| || ||| | | || ||||||| |||||||||| |||||||||| |||||||||| ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT 360 GCCCCTCAGT GCATTGATGG TCCAAGTCTG GCCTTGATTG AGAC 43781 |||||| | ||||||||| ||| || || |||| || || |||| TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGACTG AGAC 404 hqPGS_C08HBa0235H18.1+_SGN-E288509- (43378 43781) ******************************************************************************** EST sequence 930 -strand 535 n (File: SGN-E275948-) 1 TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 61 ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 121 TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 181 GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 241 GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 301 CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 361 CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 421 GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT AGTGGCAGCA 481 TAAGTATAAG TCACTCAAAG AAGGAAGAAG AGAACAAAAG AAGATGTCAA GTAGC Predicted gene structure (within gDNA segment 42769 to 46097): Exon 1 43379 43781 ( 403 n); cDNA 1 403 ( 403 n); score: 0.866 MATCH C08HBa0235H18.1+ SGN-E275948- 0.866 403 0.753 C PGS_C08HBa0235H18.1+_SGN-E275948- (43379 43781) Alignment (genomic DNA sequence = upper lines): TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GATTGTTACA TCCTCCGGTT 43438 |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| |||||| | | TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 60 ACTTTAAGTT GACTAGGGCA TTCACCGTTT ATATTGGCGG TGCATTGAAT TGAGTGGCAT 43498 || ||||| | ||| || |||||| ||| |||||||| | |||| ||||| || ||| ||| ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 120 TTTCCTCCAC TGGAATTGGT TGTGGCGAAA GTCATCGGTA TATTAAATCC ATCGACTAAA 43558 |||||||||| | | || || || ||| ||| ||||| || | |||||||||| |||||||||| TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 180 GAAATGTCCC AGAAATCTAG GTTGTTAAAC TGGTTCAAGG CGTATTCGGT CAAGGTGTTT 43618 |||||||||| | ||||||| |||| ||||| |||| ||||| |||| |||| | ||||||| GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 240 GGCGGTTTAC CCCACCCGGT ACACTGCAAG ACTCCACCAC AATCACCAGT CTCACAAGAA 43678 || ||||| | |||| ||||| |||||| ||| |||||||||| |||||||||| || ||| | | GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 300 CCTCTACCAG CACCGTCAAA GTTGCATTTA GTACGACCCC ATATACGTGC CATCTTAGTG 43738 ||||| || | || | | ||| |||||| | |||||||||| |||||||||| ||||||||| CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 360 CCCCTCAGTG CATTGATGGT CCAAGTCTGG CCTTGATTGA GAC 43781 |||||| | | |||||||| ||| || ||| ||| |||||| ||| CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GAC 403 hqPGS_C08HBa0235H18.1+_SGN-E275948- (43379 43781) ******************************************************************************** EST sequence 780 -strand 455 n (File: SGN-E253792-) 1 TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 61 ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 121 TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 181 GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 241 GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 301 CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 361 CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC 421 GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTT Predicted gene structure (within gDNA segment 42769 to 45297): Exon 1 43379 43781 ( 403 n); cDNA 1 403 ( 403 n); score: 0.866 MATCH C08HBa0235H18.1+ SGN-E253792- 0.866 403 0.886 C PGS_C08HBa0235H18.1+_SGN-E253792- (43379 43781) Alignment (genomic DNA sequence = upper lines): TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GATTGTTACA TCCTCCGGTT 43438 |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| |||||| | | TGGGTGCAAC AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT 60 ACTTTAAGTT GACTAGGGCA TTCACCGTTT ATATTGGCGG TGCATTGAAT TGAGTGGCAT 43498 || ||||| | ||| || |||||| ||| |||||||| | |||| ||||| || ||| ||| ACCTTAAGGG CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT 120 TTTCCTCCAC TGGAATTGGT TGTGGCGAAA GTCATCGGTA TATTAAATCC ATCGACTAAA 43558 |||||||||| | | || || || ||| ||| ||||| || | |||||||||| |||||||||| TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA 180 GAAATGTCCC AGAAATCTAG GTTGTTAAAC TGGTTCAAGG CGTATTCGGT CAAGGTGTTT 43618 |||||||||| | ||||||| |||| ||||| |||| ||||| |||| |||| | ||||||| GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT 240 GGCGGTTTAC CCCACCCGGT ACACTGCAAG ACTCCACCAC AATCACCAGT CTCACAAGAA 43678 || ||||| | |||| ||||| |||||| ||| |||||||||| |||||||||| || ||| | | GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA 300 CCTCTACCAG CACCGTCAAA GTTGCATTTA GTACGACCCC ATATACGTGC CATCTTAGTG 43738 ||||| || | || | | ||| |||||| | |||||||||| |||||||||| ||||||||| CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT 360 CCCCTCAGTG CATTGATGGT CCAAGTCTGG CCTTGATTGA GAC 43781 |||||| | | |||||||| ||| || ||| ||| |||||| ||| CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA GAC 403 hqPGS_C08HBa0235H18.1+_SGN-E253792- (43379 43781) ******************************************************************************** EST sequence 1173 -strand 525 n (File: SGN-E208900-) 1 GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 61 CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 121 TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 181 AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 241 GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 301 CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 361 CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG ACGTCGACCA CCGCCTATCG 421 GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG TACCTCAATA GTGGCAGCAT 481 AAGTATAAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA AGATG Predicted gene structure (within gDNA segment 42770 to 46007): Exon 1 43380 43781 ( 402 n); cDNA 1 402 ( 402 n); score: 0.866 MATCH C08HBa0235H18.1+ SGN-E208900- 0.866 402 0.766 C PGS_C08HBa0235H18.1+_SGN-E208900- (43380 43781) Alignment (genomic DNA sequence = upper lines): GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG ATTGTTACAT CCTCCGGTTA 43439 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| ||||| | || GGGTGCAACA ATATTGTTGT CCTCCAAACG TGGTACAAGG GTTGTTACAT CCTCCAGGTA 60 CTTTAAGTTG ACTAGGGCAT TCACCGTTTA TATTGGCGGT GCATTGAATT GAGTGGCATT 43499 | ||||| | ||| ||| ||||| |||| ||||||| || ||| |||||| | ||| |||| CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT GCAATGAATT GCGTGACATT 120 TTCCTCCACT GGAATTGGTT GTGGCGAAAG TCATCGGTAT ATTAAATCCA TCGACTAAAG 43559 |||||||||| | || ||| | ||| |||| |||| || || |||||||||| |||||||||| TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT ATTAAATCCA TCGACTAAAG 180 AAATGTCCCA GAAATCTAGG TTGTTAAACT GGTTCAAGGC GTATTCGGTC AAGGTGTTTG 43619 |||||||||| ||||||| | ||| |||||| ||| |||||| ||| |||| | |||||||| AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC GTACTCGGCT AGGGTGTTTG 240 GCGGTTTACC CCACCCGGTA CACTGCAAGA CTCCACCACA ATCACCAGTC TCACAAGAAC 43679 | ||||| || ||| |||||| ||||| |||| |||||||||| |||||||||| | ||| | || GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA ATCACCAGTC TGACATGTAC 300 CTCTACCAGC ACCGTCAAAG TTGCATTTAG TACGACCCCA TATACGTGCC ATCTTAGTGC 43739 |||| || || | | | |||| ||||| || |||||||||| |||||||||| |||||||| | CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA TATACGTGCC ATCTTAGTTC 360 CCCTCAGTGC ATTGATGGTC CAAGTCTGGC CTTGATTGAG AC 43781 ||||| | || ||||||| | || || |||| || ||||||| || CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG AC 402 hqPGS_C08HBa0235H18.1+_SGN-E208900- (43380 43781) ******************************************************************************** EST sequence 1104 -strand 411 n (File: SGN-E273584-) 1 GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 61 CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 121 TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 181 AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 241 GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 301 TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 361 CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC C Predicted gene structure (within gDNA segment 42771 to 44877): Exon 1 43381 43786 ( 406 n); cDNA 1 406 ( 406 n); score: 0.865 MATCH C08HBa0235H18.1+ SGN-E273584- 0.865 406 0.988 C PGS_C08HBa0235H18.1+_SGN-E273584- (43381 43786) Alignment (genomic DNA sequence = upper lines): GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGA TTGTTACATC CTCCGGTTAC 43440 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||| | ||| GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 60 TTTAAGTTGA CTAGGGCATT CACCGTTTAT ATTGGCGGTG CATTGAATTG AGTGGCATTT 43500 ||||| | ||| |||| |||| ||||| |||||| ||| || ||||||| ||| ||||| CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 120 TCCTCCACTG GAATTGGTTG TGGCGAAAGT CATCGGTATA TTAAATCCAT CGACTAAAGA 43560 ||||||||| | || |||| ||| ||||| ||| || ||| |||||||||| |||||||||| TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 180 AATGTCCCAG AAATCTAGGT TGTTAAACTG GTTCAAGGCG TATTCGGTCA AGGTGTTTGG 43620 ||||||||| ||||||| || || ||||||| || ||||||| || |||| | ||||||||| AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 240 CGGTTTACCC CACCCGGTAC ACTGCAAGAC TCCACCACAA TCACCAGTCT CACAAGAACC 43680 ||||| ||| || ||||||| |||| ||||| |||||||||| |||||||||| ||| | ||| GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 300 TCTACCAGCA CCGTCAAAGT TGCATTTAGT ACGACCCCAT ATACGTGCCA TCTTAGTGCC 43740 ||| || ||| | | ||||| |||| ||| |||||||||| |||||||||| ||||||| || TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 360 CCTCAGTGCA TTGATGGTCC AAGTCTGGCC TTGATTGAGA CGTTGA 43786 |||| | ||| |||||| || | || ||||| | |||||||| ||| || CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGA 406 hqPGS_C08HBa0235H18.1+_SGN-E273584- (43381 43786) ******************************************************************************** EST sequence 771 -strand 542 n (File: SGN-E215146-) 1 GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 61 CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 121 TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 181 AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 241 GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 301 TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 361 CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG 421 AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA 481 AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT AGCCCATGTT 541 TG Predicted gene structure (within gDNA segment 42771 to 46187): Exon 1 43381 43781 ( 401 n); cDNA 1 401 ( 401 n); score: 0.865 MATCH C08HBa0235H18.1+ SGN-E215146- 0.865 401 0.740 C PGS_C08HBa0235H18.1+_SGN-E215146- (43381 43781) Alignment (genomic DNA sequence = upper lines): GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGA TTGTTACATC CTCCGGTTAC 43440 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||| | ||| GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 60 TTTAAGTTGA CTAGGGCATT CACCGTTTAT ATTGGCGGTG CATTGAATTG AGTGGCATTT 43500 ||||| | ||| |||| |||| ||||| |||||| ||| || ||||||| ||| ||||| CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 120 TCCTCCACTG GAATTGGTTG TGGCGAAAGT CATCGGTATA TTAAATCCAT CGACTAAAGA 43560 ||||||||| | || |||| ||| ||||| ||| || ||| |||||||||| |||||||||| TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 180 AATGTCCCAG AAATCTAGGT TGTTAAACTG GTTCAAGGCG TATTCGGTCA AGGTGTTTGG 43620 ||||||||| ||||||| || || ||||||| || ||||||| || |||| | ||||||||| AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 240 CGGTTTACCC CACCCGGTAC ACTGCAAGAC TCCACCACAA TCACCAGTCT CACAAGAACC 43680 ||||| ||| || ||||||| |||| ||||| |||||||||| |||||||||| ||| | ||| GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 300 TCTACCAGCA CCGTCAAAGT TGCATTTAGT ACGACCCCAT ATACGTGCCA TCTTAGTGCC 43740 ||| || ||| | | ||||| |||| ||| |||||||||| |||||||||| ||||||| || TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 360 CCTCAGTGCA TTGATGGTCC AAGTCTGGCC TTGATTGAGA C 43781 |||| | ||| |||||| || | || ||||| | |||||||| | CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA C 401 hqPGS_C08HBa0235H18.1+_SGN-E215146- (43381 43781) ******************************************************************************** EST sequence 1006 -strand 531 n (File: SGN-E206874-) 1 GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 61 CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 121 TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 181 AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 241 GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 301 TCTGCCTGCA GCATTATAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 361 CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG 421 AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA 481 AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT A Predicted gene structure (within gDNA segment 42771 to 46077): Exon 1 43381 43781 ( 401 n); cDNA 1 401 ( 401 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E206874- 0.863 401 0.755 C PGS_C08HBa0235H18.1+_SGN-E206874- (43381 43781) Alignment (genomic DNA sequence = upper lines): GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGA TTGTTACATC CTCCGGTTAC 43440 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||| | ||| GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 60 TTTAAGTTGA CTAGGGCATT CACCGTTTAT ATTGGCGGTG CATTGAATTG AGTGGCATTT 43500 ||||| | ||| |||| |||| ||||| |||||| ||| || ||||||| ||| ||||| CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 120 TCCTCCACTG GAATTGGTTG TGGCGAAAGT CATCGGTATA TTAAATCCAT CGACTAAAGA 43560 ||||||||| | || |||| ||| ||||| ||| || ||| |||||||||| |||||||||| TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 180 AATGTCCCAG AAATCTAGGT TGTTAAACTG GTTCAAGGCG TATTCGGTCA AGGTGTTTGG 43620 ||||||||| ||||||| || || ||||||| || ||||||| || |||| | ||||||||| AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 240 CGGTTTACCC CACCCGGTAC ACTGCAAGAC TCCACCACAA TCACCAGTCT CACAAGAACC 43680 ||||| ||| || ||||||| |||| ||||| |||||||||| |||||||||| ||| | ||| GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 300 TCTACCAGCA CCGTCAAAGT TGCATTTAGT ACGACCCCAT ATACGTGCCA TCTTAGTGCC 43740 ||| || ||| | | | ||| |||| ||| |||||||||| |||||||||| ||||||| || TCTGCCTGCA GCATTATAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 360 CCTCAGTGCA TTGATGGTCC AAGTCTGGCC TTGATTGAGA C 43781 |||| | ||| |||||| || | || ||||| | |||||||| | CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA C 401 hqPGS_C08HBa0235H18.1+_SGN-E206874- (43381 43781) ******************************************************************************** EST sequence 1159 -strand 481 n (File: SGN-E311822-) 1 GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 61 CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 121 TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 181 AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 241 GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 301 TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 361 CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG 421 AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA 481 A Predicted gene structure (within gDNA segment 42771 to 45577): Exon 1 43381 43781 ( 401 n); cDNA 1 401 ( 401 n); score: 0.865 MATCH C08HBa0235H18.1+ SGN-E311822- 0.865 401 0.834 C PGS_C08HBa0235H18.1+_SGN-E311822- (43381 43781) Alignment (genomic DNA sequence = upper lines): GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGA TTGTTACATC CTCCGGTTAC 43440 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||| | ||| GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 60 TTTAAGTTGA CTAGGGCATT CACCGTTTAT ATTGGCGGTG CATTGAATTG AGTGGCATTT 43500 ||||| | ||| |||| |||| ||||| |||||| ||| || ||||||| ||| ||||| CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 120 TCCTCCACTG GAATTGGTTG TGGCGAAAGT CATCGGTATA TTAAATCCAT CGACTAAAGA 43560 ||||||||| | || |||| ||| ||||| ||| || ||| |||||||||| |||||||||| TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 180 AATGTCCCAG AAATCTAGGT TGTTAAACTG GTTCAAGGCG TATTCGGTCA AGGTGTTTGG 43620 ||||||||| ||||||| || || ||||||| || ||||||| || |||| | ||||||||| AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 240 CGGTTTACCC CACCCGGTAC ACTGCAAGAC TCCACCACAA TCACCAGTCT CACAAGAACC 43680 ||||| ||| || ||||||| |||| ||||| |||||||||| |||||||||| ||| | ||| GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 300 TCTACCAGCA CCGTCAAAGT TGCATTTAGT ACGACCCCAT ATACGTGCCA TCTTAGTGCC 43740 ||| || ||| | | ||||| |||| ||| |||||||||| |||||||||| ||||||| || TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 360 CCTCAGTGCA TTGATGGTCC AAGTCTGGCC TTGATTGAGA C 43781 |||| | ||| |||||| || | || ||||| | |||||||| | CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA C 401 hqPGS_C08HBa0235H18.1+_SGN-E311822- (43381 43781) ******************************************************************************** EST sequence 1202 -strand 492 n (File: SGN-E209439-) 1 GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 61 CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 121 TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 181 AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 241 GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 301 TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 361 CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG 421 AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA 481 AGTATAAGTC AC Predicted gene structure (within gDNA segment 42771 to 45687): Exon 1 43381 43781 ( 401 n); cDNA 1 401 ( 401 n); score: 0.865 MATCH C08HBa0235H18.1+ SGN-E209439- 0.865 401 0.815 C PGS_C08HBa0235H18.1+_SGN-E209439- (43381 43781) Alignment (genomic DNA sequence = upper lines): GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGA TTGTTACATC CTCCGGTTAC 43440 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||| | ||| GGTGCAACAA TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC 60 TTTAAGTTGA CTAGGGCATT CACCGTTTAT ATTGGCGGTG CATTGAATTG AGTGGCATTT 43500 ||||| | ||| |||| |||| ||||| |||||| ||| || ||||||| ||| ||||| CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT 120 TCCTCCACTG GAATTGGTTG TGGCGAAAGT CATCGGTATA TTAAATCCAT CGACTAAAGA 43560 ||||||||| | || |||| ||| ||||| ||| || ||| |||||||||| |||||||||| TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 180 AATGTCCCAG AAATCTAGGT TGTTAAACTG GTTCAAGGCG TATTCGGTCA AGGTGTTTGG 43620 ||||||||| ||||||| || || ||||||| || ||||||| || |||| | ||||||||| AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG 240 CGGTTTACCC CACCCGGTAC ACTGCAAGAC TCCACCACAA TCACCAGTCT CACAAGAACC 43680 ||||| ||| || ||||||| |||| ||||| |||||||||| |||||||||| ||| | ||| GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC 300 TCTACCAGCA CCGTCAAAGT TGCATTTAGT ACGACCCCAT ATACGTGCCA TCTTAGTGCC 43740 ||| || ||| | | ||||| |||| ||| |||||||||| |||||||||| ||||||| || TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC 360 CCTCAGTGCA TTGATGGTCC AAGTCTGGCC TTGATTGAGA C 43781 |||| | ||| |||||| || | || ||||| | |||||||| | CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA C 401 hqPGS_C08HBa0235H18.1+_SGN-E209439- (43381 43781) ******************************************************************************** EST sequence 763 -strand 473 n (File: SGN-E334899-) 1 TGTGCAACAA TATTGTTGTC CTCCGAACGT GGTACAAGGA TTGTTACATC CTCCGGGCAC 61 CCTAAGTGAA CCAGGACATT CACCATTTAT ATTAGCCGTA CAATGAATTG CATGGCATTT 121 CCCTCCACTA GGATTGGTCG GGGCGAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA 181 AATGTCCCAG AAATCTAGGT TGCTAAACTG GTCCAAGGCG TACTCGGCCA GGGTGTTTGG 241 TGGTTTGCCC CACCCGGTAC ATTGCAAGAC CCCACCACAA TCACCAGTCT GACATGAACC 301 TCTACCAGCA CCATCAAAGT TGCAATTCGT ACGACCCCAT ATACGTGCCA TCTTAGTGCC 361 CCTCGGTGCA TTGATGACCC ATGTTTGGCC TCGATCAAGA CGTCGACCAC CGCCTATTGG 421 GGTCGACGCC GCCCAGACGG TGTATGGACA GTTGTTGCGT ACCTCGAAAG TGG Predicted gene structure (within gDNA segment 42762 to 45434): Exon 1 43382 43781 ( 400 n); cDNA 2 401 ( 400 n); score: 0.887 MATCH C08HBa0235H18.1+ SGN-E334899- 0.887 400 0.846 C PGS_C08HBa0235H18.1+_SGN-E334899- (43382 43781) Alignment (genomic DNA sequence = upper lines): GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGAT TGTTACATCC TCCGGTTACT 43441 |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| ||||| || GTGCAACAAT ATTGTTGTCC TCCGAACGTG GTACAAGGAT TGTTACATCC TCCGGGCACC 61 TTAAGTTGAC TAGGGCATTC ACCGTTTATA TTGGCGGTGC ATTGAATTGA GTGGCATTTT 43501 ||||| || ||| ||||| ||| |||||| || || || | | ||||||| |||||||| CTAAGTGAAC CAGGACATTC ACCATTTATA TTAGCCGTAC AATGAATTGC ATGGCATTTC 121 CCTCCACTGG AATTGGTTGT GGCGAAAGTC ATCGGTATAT TAAATCCATC GACTAAAGAA 43561 |||||||| | |||||| | |||||||||| || || |||| |||||||||| |||||||||| CCTCCACTAG GATTGGTCGG GGCGAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 181 ATGTCCCAGA AATCTAGGTT GTTAAACTGG TTCAAGGCGT ATTCGGTCAA GGTGTTTGGC 43621 |||||||||| |||||||||| | |||||||| | |||||||| | |||| || ||||||||| ATGTCCCAGA AATCTAGGTT GCTAAACTGG TCCAAGGCGT ACTCGGCCAG GGTGTTTGGT 241 GGTTTACCCC ACCCGGTACA CTGCAAGACT CCACCACAAT CACCAGTCTC ACAAGAACCT 43681 ||||| |||| |||||||||| |||||||| |||||||||| ||||||||| ||| |||||| GGTTTGCCCC ACCCGGTACA TTGCAAGACC CCACCACAAT CACCAGTCTG ACATGAACCT 301 CTACCAGCAC CGTCAAAGTT GCATTTAGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC 43741 |||||||||| | |||||||| ||| || ||| |||||||||| |||||||||| |||||||||| CTACCAGCAC CATCAAAGTT GCAATTCGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC 361 CTCAGTGCAT TGATGGTCCA AGTCTGGCCT TGATTGAGAC 43781 ||| |||||| ||||| ||| || |||||| ||| |||| CTCGGTGCAT TGATGACCCA TGTTTGGCCT CGATCAAGAC 401 hqPGS_C08HBa0235H18.1+_SGN-E334899- (43382 43781) ******************************************************************************** EST sequence 899 -strand 499 n (File: SGN-E335641-) 1 GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC 61 TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT 121 CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 181 ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG 241 GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT 301 CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC 361 CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC GCCTATCGGA 421 GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT GGCAGCATAA 481 GTATAAGTCA CACAAAGAA Predicted gene structure (within gDNA segment 42772 to 45767): Exon 1 43382 43781 ( 400 n); cDNA 1 400 ( 400 n); score: 0.865 MATCH C08HBa0235H18.1+ SGN-E335641- 0.865 400 0.802 C PGS_C08HBa0235H18.1+_SGN-E335641- (43382 43781) Alignment (genomic DNA sequence = upper lines): GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGAT TGTTACATCC TCCGGTTACT 43441 |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| ||| | ||| GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGGT TGTTACATCC TCCAGGTACC 60 TTAAGTTGAC TAGGGCATTC ACCGTTTATA TTGGCGGTGC ATTGAATTGA GTGGCATTTT 43501 ||||| | ||| ||||| ||| |||||| ||||| |||| | ||||||| ||| |||||| TTAAGGGCGC GAGGACATTC ACCATTTATA TTGGCCGTGC AATGAATTGC GTGACATTTT 120 CCTCCACTGG AATTGGTTGT GGCGAAAGTC ATCGGTATAT TAAATCCATC GACTAAAGAA 43561 |||||||| | || |||| ||| |||||| || || |||| |||||||||| |||||||||| CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA 180 ATGTCCCAGA AATCTAGGTT GTTAAACTGG TTCAAGGCGT ATTCGGTCAA GGTGTTTGGC 43621 |||||||| | |||||| ||| | |||||||| | |||||||| | |||| | ||||||||| ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG GGTGTTTGGG 240 GGTTTACCCC ACCCGGTACA CTGCAAGACT CCACCACAAT CACCAGTCTC ACAAGAACCT 43681 ||||| |||| | |||||||| ||| |||||| |||||||||| ||||||||| ||| | |||| GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG ACATGTACCT 300 CTACCAGCAC CGTCAAAGTT GCATTTAGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC 43741 || || ||| | | |||||| ||| |||| |||||||||| |||||||||| |||||| ||| CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT CTTAGTTCCC 360 CTCAGTGCAT TGATGGTCCA AGTCTGGCCT TGATTGAGAC 43781 ||| | |||| ||||| ||| || |||||| ||||||||| CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC 400 hqPGS_C08HBa0235H18.1+_SGN-E335641- (43382 43781) ******************************************************************************** EST sequence 1080 -strand 441 n (File: SGN-E208167-) 1 GAGTGCAACA ATATTGTTGT CCTCCGAATG TAGTACAAGG GTTGTTACAT CCTCCGGGTA 61 CCCTAAGTGA ACCAGGGCAT TCACCGTTTA TATTAGCAAC ACATTGAATT GGATGACATT 121 TTCCCGGCCC AGGGTTAGTT GGGCCGAAAG ACATAGGGAT GTTGAATCCA TCAATAACAG 181 AAATGTCCCA GAAATCTAAG TTGCTAAATT GATTCAAAGC GTATTCAGCT AAGGTGTTTG 241 GTGGTTTACC CCATCCTTTG CATTCCAAGA CTCCACCACA ATCACCGGTC TGGCACCAAC 301 CTCTACCAGC ACCATCAAAA TTGCAATTAG TACGACCCCA AATACGTGCC ATTTTGGTGC 361 CCGGTGGAGC CCAAAACCAC CAACTTTGAC CTCTCTCGAG ACGTCGGCCA CCTCCTACGG 421 GAGTCGCCGC TGCCCATACG G Predicted gene structure (within gDNA segment 42752 to 45572): Exon 1 43382 43741 ( 360 n); cDNA 3 362 ( 360 n); score: 0.822 MATCH C08HBa0235H18.1+ SGN-E208167- 0.822 360 0.816 C PGS_C08HBa0235H18.1+_SGN-E208167- (43382 43741) Alignment (genomic DNA sequence = upper lines): GTGCAACAAT ATTGTTGTCC TCCAAACGTG GTACAAGGAT TGTTACATCC TCCGGTTACT 43441 |||||||||| |||||||||| ||| || || |||||||| | |||||||||| ||||| ||| GTGCAACAAT ATTGTTGTCC TCCGAATGTA GTACAAGGGT TGTTACATCC TCCGGGTACC 62 TTAAGTTGAC TAGGGCATTC ACCGTTTATA TTGGCGGTGC ATTGAATTGA GTGGCATTTT 43501 ||||| || ||||||||| |||||||||| || || | ||||||||| || |||||| CTAAGTGAAC CAGGGCATTC ACCGTTTATA TTAGCAACAC ATTGAATTGG ATGACATTTT 122 CCTCCACTGG AATTGGTTGT GGCGAAAGTC ATCGGTATAT TAAATCCATC GACTAAAGAA 43561 || | | || |||| | |||||| | || || || | | |||||||| | | |||| CCCGGCCCAG GGTTAGTTGG GCCGAAAGAC ATAGGGATGT TGAATCCATC AATAACAGAA 182 ATGTCCCAGA AATCTAGGTT GTTAAACTGG TTCAAGGCGT ATTCGGTCAA GGTGTTTGGC 43621 |||||||||| |||||| ||| | |||| || ||||| |||| |||| | || ||||||||| ATGTCCCAGA AATCTAAGTT GCTAAATTGA TTCAAAGCGT ATTCAGCTAA GGTGTTTGGT 242 GGTTTACCCC ACCCGGTACA CTGCAAGACT CCACCACAAT CACCAGTCTC ACAAGAACCT 43681 |||||||||| | || | || | ||||||| |||||||||| |||| |||| || ||||| GGTTTACCCC ATCCTTTGCA TTCCAAGACT CCACCACAAT CACCGGTCTG GCACCAACCT 302 CTACCAGCAC CGTCAAAGTT GCATTTAGTA CGACCCCATA TACGTGCCAT CTTAGTGCCC 43741 |||||||||| | ||||| || ||| |||||| |||||||| | |||||||||| || |||||| CTACCAGCAC CATCAAAATT GCAATTAGTA CGACCCCAAA TACGTGCCAT TTTGGTGCCC 362 hqPGS_C08HBa0235H18.1+_SGN-E208167- (43382 43741) ******************************************************************************** EST sequence 693 -strand 534 n (File: SGN-E250262-) 1 CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG 61 GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA 121 CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC 181 CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG 241 CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT 301 GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA 361 GCATTGATGA CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT CGGAGTCGAT 421 GCCGCCCAAA CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGCAGC ATAAGTATAA 481 GTCACACAAA GAAGGAAGAA GAGAACAAAA GAAGATGTCA AGTAGCCCAT GTTT Predicted gene structure (within gDNA segment 42778 to 46177): Exon 1 43388 43781 ( 394 n); cDNA 1 394 ( 394 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E250262- 0.863 394 0.738 C PGS_C08HBa0235H18.1+_SGN-E250262- (43388 43781) Alignment (genomic DNA sequence = upper lines): CAATATTGTT GTCCTCCAAA CGTGGTACAA GGATTGTTAC ATCCTCCGGT TACTTTAAGT 43447 |||||||||| |||||||||| |||||||||| || ||||||| ||||||| | ||| ||||| CAATATTGTT GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG 60 TGACTAGGGC ATTCACCGTT TATATTGGCG GTGCATTGAA TTGAGTGGCA TTTTCCTCCA 43507 | ||| | ||||||| || ||||||||| ||||| |||| ||| ||| || |||||||||| GCGCGAGGAC ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA 120 CTGGAATTGG TTGTGGCGAA AGTCATCGGT ATATTAAATC CATCGACTAA AGAAATGTCC 43567 || | || | ||| ||| || |||||| || |||||||||| |||||||||| |||||||||| CTAGGTTTTG TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC 180 CAGAAATCTA GGTTGTTAAA CTGGTTCAAG GCGTATTCGG TCAAGGTGTT TGGCGGTTTA 43627 || ||||||| |||| |||| ||||| |||| ||||| |||| | |||||| ||| ||||| CAAAAATCTA AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG 240 CCCCACCCGG TACACTGCAA GACTCCACCA CAATCACCAG TCTCACAAGA ACCTCTACCA 43687 ||||| |||| ||||||| || |||||||||| |||||||||| ||| ||| | |||||| || CCCCATCCGG TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT 300 GCACCGTCAA AGTTGCATTT AGTACGACCC CATATACGTG CCATCTTAGT GCCCCTCAGT 43747 ||| | | || ||||||| |||||||||| |||||||||| |||||||||| |||||| | GCAGCATTAA AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA 360 GCATTGATGG TCCAAGTCTG GCCTTGATTG AGAC 43781 ||||||||| ||| || || |||| ||||| |||| GCATTGATGA CCCATGTTTG GCCTCGATTG AGAC 394 hqPGS_C08HBa0235H18.1+_SGN-E250262- (43388 43781) ******************************************************************************** EST sequence 995 -strand 516 n (File: SGN-E274937-) 1 AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACCTTAAGGG 61 CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC 121 TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC 181 AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC 241 CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG 301 CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG 361 CATTGATGAC CCATGTTTGG CCTCGATTGA GACGTCGACC ACCGCCTATC GGAGTCGATG 421 CCGCCCAAAC GGTGTATGGA CAGTTGTTGC GTACCTCAAT AGTGGCAGCA TAAGTATAAG 481 TCACACAAAG AAGGAAGAAG AGAACAAAAG AAGATG Predicted gene structure (within gDNA segment 42779 to 46007): Exon 1 43389 43781 ( 393 n); cDNA 1 393 ( 393 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E274937- 0.863 393 0.762 C PGS_C08HBa0235H18.1+_SGN-E274937- (43389 43781) Alignment (genomic DNA sequence = upper lines): AATATTGTTG TCCTCCAAAC GTGGTACAAG GATTGTTACA TCCTCCGGTT ACTTTAAGTT 43448 |||||||||| |||||||||| |||||||||| | |||||||| |||||| | | || ||||| AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACCTTAAGGG 60 GACTAGGGCA TTCACCGTTT ATATTGGCGG TGCATTGAAT TGAGTGGCAT TTTCCTCCAC 43508 | ||| || |||||| ||| |||||||| | |||| ||||| || ||| ||| |||||||||| CGCGAGGACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC 120 TGGAATTGGT TGTGGCGAAA GTCATCGGTA TATTAAATCC ATCGACTAAA GAAATGTCCC 43568 | | || || || ||| ||| ||||| || | |||||||||| |||||||||| |||||||||| TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC 180 AGAAATCTAG GTTGTTAAAC TGGTTCAAGG CGTATTCGGT CAAGGTGTTT GGCGGTTTAC 43628 | ||||||| |||| ||||| |||| ||||| |||| |||| | ||||||| || ||||| | AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC 240 CCCACCCGGT ACACTGCAAG ACTCCACCAC AATCACCAGT CTCACAAGAA CCTCTACCAG 43688 |||| ||||| |||||| ||| |||||||||| |||||||||| || ||| | | ||||| || | CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG 300 CACCGTCAAA GTTGCATTTA GTACGACCCC ATATACGTGC CATCTTAGTG CCCCTCAGTG 43748 || | | ||| |||||| | |||||||||| |||||||||| ||||||||| |||||| | | CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG 360 CATTGATGGT CCAAGTCTGG CCTTGATTGA GAC 43781 |||||||| ||| || ||| ||| |||||| ||| CATTGATGAC CCATGTTTGG CCTCGATTGA GAC 393 hqPGS_C08HBa0235H18.1+_SGN-E274937- (43389 43781) ******************************************************************************** EST sequence 732 -strand 390 n (File: SGN-E205109-) 1 AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACATTAAGGG 61 CGCGAGTACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC 121 TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC 181 AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC 241 CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG 301 CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG 361 CATTGATGAC CCATGATTGG CCTTTATTGA Predicted gene structure (within gDNA segment 42779 to 44747): Exon 1 43389 43778 ( 390 n); cDNA 1 390 ( 390 n); score: 0.856 MATCH C08HBa0235H18.1+ SGN-E205109- 0.856 390 1.000 C PGS_C08HBa0235H18.1+_SGN-E205109- (43389 43778) Alignment (genomic DNA sequence = upper lines): AATATTGTTG TCCTCCAAAC GTGGTACAAG GATTGTTACA TCCTCCGGTT ACTTTAAGTT 43448 |||||||||| |||||||||| |||||||||| | |||||||| |||||| | | || ||||| AATATTGTTG TCCTCCAAAC GTGGTACAAG GGTTGTTACA TCCTCCAGGT ACATTAAGGG 60 GACTAGGGCA TTCACCGTTT ATATTGGCGG TGCATTGAAT TGAGTGGCAT TTTCCTCCAC 43508 | || || |||||| ||| |||||||| | |||| ||||| || ||| ||| |||||||||| CGCGAGTACA TTCACCATTT ATATTGGCCG TGCAATGAAT TGCGTGACAT TTTCCTCCAC 120 TGGAATTGGT TGTGGCGAAA GTCATCGGTA TATTAAATCC ATCGACTAAA GAAATGTCCC 43568 | | || || || ||| ||| ||||| || | |||||||||| |||||||||| |||||||||| TAGGTTTTGT TGGGGCAAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC 180 AGAAATCTAG GTTGTTAAAC TGGTTCAAGG CGTATTCGGT CAAGGTGTTT GGCGGTTTAC 43628 | ||||||| |||| ||||| |||| ||||| |||| |||| | ||||||| || ||||| | AAAAATCTAA GTTGCTAAAC TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC 240 CCCACCCGGT ACACTGCAAG ACTCCACCAC AATCACCAGT CTCACAAGAA CCTCTACCAG 43688 |||| ||||| |||||| ||| |||||||||| |||||||||| || ||| | | ||||| || | CCCATCCGGT ACACTGTAAG ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG 300 CACCGTCAAA GTTGCATTTA GTACGACCCC ATATACGTGC CATCTTAGTG CCCCTCAGTG 43748 || | | ||| |||||| | |||||||||| |||||||||| ||||||||| |||||| | | CAGCATTAAA GTTGCAACCA GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG 360 CATTGATGGT CCAAGTCTGG CCTTGATTGA 43778 |||||||| ||| | ||| |||| ||||| CATTGATGAC CCATGATTGG CCTTTATTGA 390 hqPGS_C08HBa0235H18.1+_SGN-E205109- (43389 43778) ******************************************************************************** EST sequence 631 -strand 418 n (File: SGN-E204875-) 1 TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC ATTAAGGGCG 61 CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 121 GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 181 AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 241 CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 301 GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 361 TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATG Predicted gene structure (within gDNA segment 41458 to 45047): Exon 1 43391 43781 ( 391 n); cDNA 1 391 ( 391 n); score: 0.862 MATCH C08HBa0235H18.1+ SGN-E204875- 0.862 391 0.935 C PGS_C08HBa0235H18.1+_SGN-E204875- (43391 43781) Alignment (genomic DNA sequence = upper lines): TATTGTTGTC CTCCAAACGT GGTACAAGGA TTGTTACATC CTCCGGTTAC TTTAAGTTGA 43450 |||||||||| |||||||||| ||||||||| |||||||||| |||| | ||| ||||| TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC ATTAAGGGCG 60 CTAGGGCATT CACCGTTTAT ATTGGCGGTG CATTGAATTG AGTGGCATTT TCCTCCACTG 43510 | ||| |||| |||| ||||| |||||| ||| || ||||||| ||| ||||| ||||||||| CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 120 GAATTGGTTG TGGCGAAAGT CATCGGTATA TTAAATCCAT CGACTAAAGA AATGTCCCAG 43570 | || |||| ||| ||||| ||| || ||| |||||||||| |||||||||| ||||||||| GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 180 AAATCTAGGT TGTTAAACTG GTTCAAGGCG TATTCGGTCA AGGTGTTTGG CGGTTTACCC 43630 ||||||| || || ||||||| || ||||||| || |||| | ||||||||| ||||| ||| AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 240 CACCCGGTAC ACTGCAAGAC TCCACCACAA TCACCAGTCT CACAAGAACC TCTACCAGCA 43690 || ||||||| |||| ||||| |||||||||| |||||||||| ||| | ||| ||| || ||| CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 300 CCGTCAAAGT TGCATTTAGT ACGACCCCAT ATACGTGCCA TCTTAGTGCC CCTCAGTGCA 43750 | | ||||| |||| ||| |||||||||| |||||||||| ||||||| || |||| | ||| GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 360 TTGATGGTCC AAGTCTGGCC TTGATTGAGA C 43781 |||||| || | || ||||| | |||||||| | TTGATGACCC ATGTTTGGCC TCGATTGAGA C 391 hqPGS_C08HBa0235H18.1+_SGN-E204875- (43391 43781) ******************************************************************************** EST sequence 775 -strand 506 n (File: SGN-E252003-) 1 TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 61 CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 121 GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 181 AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 241 CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 301 GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 361 TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATGCC 421 GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA AGTATAAGTC 481 ACACAAAGAA GGAAGAAGAG AACAAA Predicted gene structure (within gDNA segment 41458 to 45927): Exon 1 43391 43781 ( 391 n); cDNA 1 391 ( 391 n); score: 0.862 MATCH C08HBa0235H18.1+ SGN-E252003- 0.862 391 0.773 C PGS_C08HBa0235H18.1+_SGN-E252003- (43391 43781) Alignment (genomic DNA sequence = upper lines): TATTGTTGTC CTCCAAACGT GGTACAAGGA TTGTTACATC CTCCGGTTAC TTTAAGTTGA 43450 |||||||||| |||||||||| ||||||||| |||||||||| |||| | ||| ||||| TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 60 CTAGGGCATT CACCGTTTAT ATTGGCGGTG CATTGAATTG AGTGGCATTT TCCTCCACTG 43510 | ||| |||| |||| ||||| |||||| ||| || ||||||| ||| ||||| ||||||||| CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 120 GAATTGGTTG TGGCGAAAGT CATCGGTATA TTAAATCCAT CGACTAAAGA AATGTCCCAG 43570 | || |||| ||| ||||| ||| || ||| |||||||||| |||||||||| ||||||||| GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 180 AAATCTAGGT TGTTAAACTG GTTCAAGGCG TATTCGGTCA AGGTGTTTGG CGGTTTACCC 43630 ||||||| || || ||||||| || ||||||| || |||| | ||||||||| ||||| ||| AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 240 CACCCGGTAC ACTGCAAGAC TCCACCACAA TCACCAGTCT CACAAGAACC TCTACCAGCA 43690 || ||||||| |||| ||||| |||||||||| |||||||||| ||| | ||| ||| || ||| CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 300 CCGTCAAAGT TGCATTTAGT ACGACCCCAT ATACGTGCCA TCTTAGTGCC CCTCAGTGCA 43750 | | ||||| |||| ||| |||||||||| |||||||||| ||||||| || |||| | ||| GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 360 TTGATGGTCC AAGTCTGGCC TTGATTGAGA C 43781 |||||| || | || ||||| | |||||||| | TTGATGACCC ATGTTTGGCC TCGATTGAGA C 391 hqPGS_C08HBa0235H18.1+_SGN-E252003- (43391 43781) ******************************************************************************** EST sequence 987 -strand 521 n (File: SGN-E274932-) 1 TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 61 CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 121 GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 181 AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 241 CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 301 GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 361 TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATGCC 421 GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA AGTATAAGTC 481 ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT A Predicted gene structure (within gDNA segment 41458 to 46077): Exon 1 43391 43781 ( 391 n); cDNA 1 391 ( 391 n); score: 0.862 MATCH C08HBa0235H18.1+ SGN-E274932- 0.862 391 0.750 C PGS_C08HBa0235H18.1+_SGN-E274932- (43391 43781) Alignment (genomic DNA sequence = upper lines): TATTGTTGTC CTCCAAACGT GGTACAAGGA TTGTTACATC CTCCGGTTAC TTTAAGTTGA 43450 |||||||||| |||||||||| ||||||||| |||||||||| |||| | ||| ||||| TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 60 CTAGGGCATT CACCGTTTAT ATTGGCGGTG CATTGAATTG AGTGGCATTT TCCTCCACTG 43510 | ||| |||| |||| ||||| |||||| ||| || ||||||| ||| ||||| ||||||||| CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 120 GAATTGGTTG TGGCGAAAGT CATCGGTATA TTAAATCCAT CGACTAAAGA AATGTCCCAG 43570 | || |||| ||| ||||| ||| || ||| |||||||||| |||||||||| ||||||||| GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 180 AAATCTAGGT TGTTAAACTG GTTCAAGGCG TATTCGGTCA AGGTGTTTGG CGGTTTACCC 43630 ||||||| || || ||||||| || ||||||| || |||| | ||||||||| ||||| ||| AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 240 CACCCGGTAC ACTGCAAGAC TCCACCACAA TCACCAGTCT CACAAGAACC TCTACCAGCA 43690 || ||||||| |||| ||||| |||||||||| |||||||||| ||| | ||| ||| || ||| CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 300 CCGTCAAAGT TGCATTTAGT ACGACCCCAT ATACGTGCCA TCTTAGTGCC CCTCAGTGCA 43750 | | ||||| |||| ||| |||||||||| |||||||||| ||||||| || |||| | ||| GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 360 TTGATGGTCC AAGTCTGGCC TTGATTGAGA C 43781 |||||| || | || ||||| | |||||||| | TTGATGACCC ATGTTTGGCC TCGATTGAGA C 391 hqPGS_C08HBa0235H18.1+_SGN-E274932- (43391 43781) ******************************************************************************** EST sequence 1049 -strand 530 n (File: SGN-E275676-) 1 TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 61 CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 121 GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 181 AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 241 CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 301 GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 361 TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC CGCCTATCGG AGTCGATGCC 421 GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG TGGCAGCATA AGTATAAGTC 481 ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT AGCCCATGTT Predicted gene structure (within gDNA segment 41458 to 46167): Exon 1 43391 43781 ( 391 n); cDNA 1 391 ( 391 n); score: 0.862 MATCH C08HBa0235H18.1+ SGN-E275676- 0.862 391 0.738 C PGS_C08HBa0235H18.1+_SGN-E275676- (43391 43781) Alignment (genomic DNA sequence = upper lines): TATTGTTGTC CTCCAAACGT GGTACAAGGA TTGTTACATC CTCCGGTTAC TTTAAGTTGA 43450 |||||||||| |||||||||| ||||||||| |||||||||| |||| | ||| ||||| TATTGTTGTC CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC CTTAAGGGCG 60 CTAGGGCATT CACCGTTTAT ATTGGCGGTG CATTGAATTG AGTGGCATTT TCCTCCACTG 43510 | ||| |||| |||| ||||| |||||| ||| || ||||||| ||| ||||| ||||||||| CGAGGACATT CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA 120 GAATTGGTTG TGGCGAAAGT CATCGGTATA TTAAATCCAT CGACTAAAGA AATGTCCCAG 43570 | || |||| ||| ||||| ||| || ||| |||||||||| |||||||||| ||||||||| GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA 180 AAATCTAGGT TGTTAAACTG GTTCAAGGCG TATTCGGTCA AGGTGTTTGG CGGTTTACCC 43630 ||||||| || || ||||||| || ||||||| || |||| | ||||||||| ||||| ||| AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC 240 CACCCGGTAC ACTGCAAGAC TCCACCACAA TCACCAGTCT CACAAGAACC TCTACCAGCA 43690 || ||||||| |||| ||||| |||||||||| |||||||||| ||| | ||| ||| || ||| CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA 300 CCGTCAAAGT TGCATTTAGT ACGACCCCAT ATACGTGCCA TCTTAGTGCC CCTCAGTGCA 43750 | | ||||| |||| ||| |||||||||| |||||||||| ||||||| || |||| | ||| GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 360 TTGATGGTCC AAGTCTGGCC TTGATTGAGA C 43781 |||||| || | || ||||| | |||||||| | TTGATGACCC ATGTTTGGCC TCGATTGAGA C 391 hqPGS_C08HBa0235H18.1+_SGN-E275676- (43391 43781) ******************************************************************************** EST sequence 1037 -strand 467 n (File: SGN-E266663-) 1 GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACTTTA AGGGCGCGAG 61 GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT 121 TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT 181 CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC 241 CGGTACGCTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT 301 TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA 361 TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATAGGAGTC GATGCCGCCC 421 AAACGGTGTA TGGACAGTTG TATAAGTACC TCAATAGTGG CAGCATA Predicted gene structure (within gDNA segment 41498 to 45577): Exon 1 43395 43781 ( 387 n); cDNA 1 387 ( 387 n); score: 0.860 MATCH C08HBa0235H18.1+ SGN-E266663- 0.860 387 0.829 C PGS_C08HBa0235H18.1+_SGN-E266663- (43395 43781) Alignment (genomic DNA sequence = upper lines): GTTGTCCTCC AAACGTGGTA CAAGGATTGT TACATCCTCC GGTTACTTTA AGTTGACTAG 43454 |||||||||| |||||||||| ||||| |||| |||||||||| | ||||||| || | || GTTGTCCTCC AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACTTTA AGGGCGCGAG 60 GGCATTCACC GTTTATATTG GCGGTGCATT GAATTGAGTG GCATTTTCCT CCACTGGAAT 43514 | |||||||| ||||||||| || ||||| | |||||| ||| ||||||||| ||||| | | GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT 120 TGGTTGTGGC GAAAGTCATC GGTATATTAA ATCCATCGAC TAAAGAAATG TCCCAGAAAT 43574 | |||| ||| |||||||| || ||||||| |||||||||| |||||||||| ||||| |||| TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT 180 CTAGGTTGTT AAACTGGTTC AAGGCGTATT CGGTCAAGGT GTTTGGCGGT TTACCCCACC 43634 ||| |||| | |||||||| | |||||||| | ||| | ||| |||||| ||| || ||||| | CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC 240 CGGTACACTG CAAGACTCCA CCACAATCAC CAGTCTCACA AGAACCTCTA CCAGCACCGT 43694 |||||| ||| ||||||||| |||||||||| |||||| ||| | |||||| || ||| | | CGGTACGCTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT 300 CAAAGTTGCA TTTAGTACGA CCCCATATAC GTGCCATCTT AGTGCCCCTC AGTGCATTGA 43754 ||||||||| ||||||| |||||||||| |||||||||| ||| |||||| | ||||||| TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA 360 TGGTCCAAGT CTGGCCTTGA TTGAGAC 43781 || ||| || |||||| || ||||||| TGACCCATGT TTGGCCTCGA TTGAGAC 387 hqPGS_C08HBa0235H18.1+_SGN-E266663- (43395 43781) ******************************************************************************** EST sequence 1013 -strand 524 n (File: SGN-E246947-) 1 GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC 61 ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG 121 TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA 181 AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG 241 TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA 301 AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA 361 CCCATGTTTG GCCTCGATTG AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA 421 CGGTGTATGG ACAGTTGTTG CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA 481 GAAGGAAGAA GAGAACAAAA GAAGATGTCA AGTAGCCCAT GTTT Predicted gene structure (within gDNA segment 41528 to 46177): Exon 1 43398 43781 ( 384 n); cDNA 1 384 ( 384 n); score: 0.859 MATCH C08HBa0235H18.1+ SGN-E246947- 0.859 384 0.733 C PGS_C08HBa0235H18.1+_SGN-E246947- (43398 43781) Alignment (genomic DNA sequence = upper lines): GTCCTCCAAA CGTGGTACAA GGATTGTTAC ATCCTCCGGT TACTTTAAGT TGACTAGGGC 43457 |||||||||| |||||||||| || ||||||| ||||||| | ||| ||||| | ||| | GTCCTCCAAA CGTGGTACAA GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC 60 ATTCACCGTT TATATTGGCG GTGCATTGAA TTGAGTGGCA TTTTCCTCCA CTGGAATTGG 43517 ||||||| || ||||||||| ||||| |||| ||| ||| || |||||||||| || | || | ATTCACCATT TATATTGGCC GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG 120 TTGTGGCGAA AGTCATCGGT ATATTAAATC CATCGACTAA AGAAATGTCC CAGAAATCTA 43577 ||| ||| || |||||| || |||||||||| |||||||||| |||||||||| || ||||||| TTGGGGCAAA AGTCATTGGA ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA 180 GGTTGTTAAA CTGGTTCAAG GCGTATTCGG TCAAGGTGTT TGGCGGTTTA CCCCACCCGG 43637 |||| |||| ||||| |||| ||||| |||| | |||||| ||| ||||| ||||| |||| AGTTGCTAAA CTGGTCCAAG GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG 240 TACACTGCAA GACTCCACCA CAATCACCAG TCTCACAAGA ACCTCTACCA GCACCGTCAA 43697 ||||||| || |||||||||| |||||||||| ||| ||| | |||||| || ||| | | || TACACTGTAA GACTCCACCA CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA 300 AGTTGCATTT AGTACGACCC CATATACGTG CCATCTTAGT GCCCCTCAGT GCATTGATGG 43757 ||||||| |||||||||| |||||||||| |||||||||| |||||| | ||||||||| AGTTGCAACC AGTACGACCC CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA 360 TCCAAGTCTG GCCTTGATTG AGAC 43781 ||| || || |||| ||||| |||| CCCATGTTTG GCCTCGATTG AGAC 384 hqPGS_C08HBa0235H18.1+_SGN-E246947- (43398 43781) ******************************************************************************** EST sequence 1032 -strand 350 n (File: SGN-E275799-) 1 CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC TTTAAGGGCG CGAGGACATT 61 CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG 121 GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT 181 TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC 241 ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA GCATTAAAGT 301 TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA Predicted gene structure (within gDNA segment 41558 to 44467): Exon 1 43401 43750 ( 350 n); cDNA 1 350 ( 350 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E275799- 0.863 350 1.000 C PGS_C08HBa0235H18.1+_SGN-E275799- (43401 43750) Alignment (genomic DNA sequence = upper lines): CTCCAAACGT GGTACAAGGA TTGTTACATC CTCCGGTTAC TTTAAGTTGA CTAGGGCATT 43460 |||||||||| ||||||||| |||||||||| |||| | ||| |||||| | ||| |||| CTCCAAACGT GGTACAAGGG TTGTTACATC CTCCAGGTAC TTTAAGGGCG CGAGGACATT 60 CACCGTTTAT ATTGGCGGTG CATTGAATTG AGTGGCATTT TCCTCCACTG GAATTGGTTG 43520 |||| ||||| |||||| ||| || ||||||| ||| ||||| ||||||||| | || |||| CACCATTTAT ATTGGCCGTG CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG 120 TGGCGAAAGT CATCGGTATA TTAAATCCAT CGACTAAAGA AATGTCCCAG AAATCTAGGT 43580 ||| ||||| ||| || ||| |||||||||| |||||||||| ||||||||| ||||||| || GGGCAAAAGT CATTGGAATA TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT 180 TGTTAAACTG GTTCAAGGCG TATTCGGTCA AGGTGTTTGG CGGTTTACCC CACCCGGTAC 43640 || ||||||| || ||||||| || |||| | ||||||||| ||||| ||| || ||||||| TGCTAAACTG GTCCAAGGCG TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC 240 ACTGCAAGAC TCCACCACAA TCACCAGTCT CACAAGAACC TCTACCAGCA CCGTCAAAGT 43700 |||| ||||| |||||||||| |||||||||| ||| | ||| ||| || ||| | | ||||| ACTGTAAGAC TCCACCACAA TCACCAGTCT GACATGTACC TCTGCCTGCA GCATTAAAGT 300 TGCATTTAGT ACGACCCCAT ATACGTGCCA TCTTAGTGCC CCTCAGTGCA 43750 |||| ||| |||||||||| |||||||||| ||||||| || |||| | ||| TGCAACCAGT ACGACCCCAT ATACGTGCCA TCTTAGTTCC CCTCGGAGCA 350 hqPGS_C08HBa0235H18.1+_SGN-E275799- (43401 43750) ******************************************************************************** EST sequence 676 -strand 457 n (File: SGN-E203662-) 1 AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC 61 ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 121 AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 181 AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 241 TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 301 ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 361 TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA 421 TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAA Predicted gene structure (within gDNA segment 41598 to 45577): Exon 1 43405 43781 ( 377 n); cDNA 1 377 ( 377 n); score: 0.857 MATCH C08HBa0235H18.1+ SGN-E203662- 0.857 377 0.825 C PGS_C08HBa0235H18.1+_SGN-E203662- (43405 43781) Alignment (genomic DNA sequence = upper lines): AAACGTGGTA CAAGGATTGT TACATCCTCC GGTTACTTTA AGTTGACTAG GGCATTCACC 43464 |||||||||| ||||| |||| |||||||||| | ||| ||| || | || | |||||||| AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC 60 GTTTATATTG GCGGTGCATT GAATTGAGTG GCATTTTCCT CCACTGGAAT TGGTTGTGGC 43524 ||||||||| || ||||| | |||||| ||| ||||||||| ||||| | | | |||| ||| ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 120 GAAAGTCATC GGTATATTAA ATCCATCGAC TAAAGAAATG TCCCAGAAAT CTAGGTTGTT 43584 |||||||| || ||||||| |||||||||| |||||||||| ||||| |||| ||| |||| | AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 180 AAACTGGTTC AAGGCGTATT CGGTCAAGGT GTTTGGCGGT TTACCCCACC CGGTACACTG 43644 |||||||| | |||||||| | ||| | ||| |||||| ||| || ||||| | |||||||||| AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 240 CAAGACTCCA CCACAATCAC CAGTCTCACA AGAACCTCTA CCAGCACCGT CAAAGTTGCA 43704 ||||||||| |||||||||| |||||| ||| | |||||| || ||| | | ||||||||| TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 300 TTTAGTACGA CCCCATATAC GTGCCATCTT AGTGCCCCTC AGTGCATTGA TGGTCCAAGT 43764 ||||||| |||||||||| |||||||||| ||| |||||| | ||||||| || ||| || ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 360 CTGGCCTTGA TTGAGAC 43781 |||||| || ||||||| TTGGCCTCGA TTGAGAC 377 hqPGS_C08HBa0235H18.1+_SGN-E203662- (43405 43781) ******************************************************************************** EST sequence 767 -strand 518 n (File: SGN-E214938-) 1 AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC 61 ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 121 AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 181 AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 241 TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 301 ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 361 TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA 421 TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA 481 GAAGAGAACA AAAGAAGATG TCAAGTAGCC CATGTTTG Predicted gene structure (within gDNA segment 41598 to 46187): Exon 1 43405 43781 ( 377 n); cDNA 1 377 ( 377 n); score: 0.857 MATCH C08HBa0235H18.1+ SGN-E214938- 0.857 377 0.728 C PGS_C08HBa0235H18.1+_SGN-E214938- (43405 43781) Alignment (genomic DNA sequence = upper lines): AAACGTGGTA CAAGGATTGT TACATCCTCC GGTTACTTTA AGTTGACTAG GGCATTCACC 43464 |||||||||| ||||| |||| |||||||||| | ||| ||| || | || | |||||||| AAACGTGGTA CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC 60 GTTTATATTG GCGGTGCATT GAATTGAGTG GCATTTTCCT CCACTGGAAT TGGTTGTGGC 43524 ||||||||| || ||||| | |||||| ||| ||||||||| ||||| | | | |||| ||| ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 120 GAAAGTCATC GGTATATTAA ATCCATCGAC TAAAGAAATG TCCCAGAAAT CTAGGTTGTT 43584 |||||||| || ||||||| |||||||||| |||||||||| ||||| |||| ||| |||| | AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 180 AAACTGGTTC AAGGCGTATT CGGTCAAGGT GTTTGGCGGT TTACCCCACC CGGTACACTG 43644 |||||||| | |||||||| | ||| | ||| |||||| ||| || ||||| | |||||||||| AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 240 CAAGACTCCA CCACAATCAC CAGTCTCACA AGAACCTCTA CCAGCACCGT CAAAGTTGCA 43704 ||||||||| |||||||||| |||||| ||| | |||||| || ||| | | ||||||||| TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 300 TTTAGTACGA CCCCATATAC GTGCCATCTT AGTGCCCCTC AGTGCATTGA TGGTCCAAGT 43764 ||||||| |||||||||| |||||||||| ||| |||||| | ||||||| || ||| || ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 360 CTGGCCTTGA TTGAGAC 43781 |||||| || ||||||| TTGGCCTCGA TTGAGAC 377 hqPGS_C08HBa0235H18.1+_SGN-E214938- (43405 43781) ******************************************************************************** EST sequence 718 -strand 528 n (File: SGN-E304108-) 1 CGAATGTAGT ACAAGGGTTG TTACATCCTC CGGGTACCCT AAGTGAACCA GGGCATTCAC 61 CGTTTATATT AGCAACACAT TGAATTGGAT GACATTTTCC CGGCCCAGGG TTAGTTGGGC 121 CGAAAGACAT AGGGATGTTG AATCCATCAA TAACAGAAAT GTCCCAGAAA TCTAAGTTGC 181 TAAATTGATT CAAAGCGTAT TCAGCTAAGG TGTTTGGTGG TTTACCCCAT CCTTTGCATT 241 CCAAGACTCC ACCACAATCA CCGGTCTGGC ACCAACCTCT ACCAGCACCA TCAAAATTGC 301 AATTAGTACG ACCCCAAATA CGTGCCATTT TGGTGCCCGG TGGAGCCCAA AACCACCAAC 361 TTTGACCTCT CTCGAGACGT CGGCCACCTC CTACGGGAGT CGCCGCTGCC CATACGGTGT 421 ATGGACAGTT GTTATGGACC TCAAATACAC CGGAAGCATA AGTGTAAGTC ACAAAGGCAA 481 GGAGAAAGAA CACTAAACAA GTTGTCAAAT GACTCATTTT AGAATAAA Predicted gene structure (within gDNA segment 42641 to 46682): Exon 1 43406 43781 ( 376 n); cDNA 3 378 ( 376 n); score: 0.779 MATCH C08HBa0235H18.1+ SGN-E304108- 0.779 376 0.712 C PGS_C08HBa0235H18.1+_SGN-E304108- (43406 43781) Alignment (genomic DNA sequence = upper lines): AACGTGGTAC AAGGATTGTT ACATCCTCCG GTTACTTTAA GTTGACTAGG GCATTCACCG 43465 || || |||| |||| ||||| |||||||||| | ||| ||| || || ||| |||||||||| AATGTAGTAC AAGGGTTGTT ACATCCTCCG GGTACCCTAA GTGAACCAGG GCATTCACCG 62 TTTATATTGG CGGTGCATTG AATTGAGTGG CATTTTCCTC CACTGGAATT GGTTGTGGCG 43525 |||||||| | | ||||| ||||| || |||||||| | | || |||| | || TTTATATTAG CAACACATTG AATTGGATGA CATTTTCCCG GCCCAGGGTT AGTTGGGCCG 122 AAAGTCATCG GTATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC TAGGTTGTTA 43585 |||| ||| | | || || || |||||| | | |||||||| |||||||||| || |||| || AAAGACATAG GGATGTTGAA TCCATCAATA ACAGAAATGT CCCAGAAATC TAAGTTGCTA 182 AACTGGTTCA AGGCGTATTC GGTCAAGGTG TTTGGCGGTT TACCCCACCC GGTACACTGC 43645 || || |||| | |||||||| | |||||| ||||| |||| ||||||| || | || | | AATTGATTCA AAGCGTATTC AGCTAAGGTG TTTGGTGGTT TACCCCATCC TTTGCATTCC 242 AAGACTCCAC CACAATCACC AGTCTCACAA GAACCTCTAC CAGCACCGTC AAAGTTGCAT 43705 |||||||||| |||||||||| |||| || ||||||||| ||||||| || ||| ||||| AAGACTCCAC CACAATCACC GGTCTGGCAC CAACCTCTAC CAGCACCATC AAAATTGCAA 302 TTAGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCA GTGCATTGAT GGTCCAAGTC 43765 |||||||||| |||| ||||| |||||| || |||||| | || | |||| | TTAGTACGAC CCCAAATACG TGCCATTTTG GTGCCCGGTG GAGCCCAAAA CCACCAACTT 362 TGGCCTTGAT TGAGAC 43781 || ||| | ||||| TGACCTCTCT CGAGAC 378 hqPGS_C08HBa0235H18.1+_SGN-E304108- (43406 43781) ******************************************************************************** EST sequence 667 -strand 490 n (File: SGN-E204618-) 1 CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC ATTTATATTG 61 CCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC AAAAGTCATT 121 GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT AAACTGGTCC 181 AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG TAAGACTCCT 241 CCACAATCAC CAGTTTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA ACCAGTACGA 301 CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT TTGGCCTCGA 361 TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA TGGACAGTTG 421 TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA GAACAGAACA 481 AAAGAAGATG Predicted gene structure (within gDNA segment 41698 to 46007): Exon 1 43415 43781 ( 367 n); cDNA 1 367 ( 367 n); score: 0.845 MATCH C08HBa0235H18.1+ SGN-E204618- 0.845 367 0.749 C PGS_C08HBa0235H18.1+_SGN-E204618- (43415 43781) Alignment (genomic DNA sequence = upper lines): CAAGGATTGT TACATCCTCC GGTTACTTTA AGTTGACTAG GGCATTCACC GTTTATATTG 43474 ||||| |||| |||||||||| | ||| ||| || | || | |||||||| ||||||||| CAAGGGTTGT TACATCCTCC AGGTACCTTA AGGGCGCGAG GACATTCACC ATTTATATTG 60 GCGGTGCATT GAATTGAGTG GCATTTTCCT CCACTGGAAT TGGTTGTGGC GAAAGTCATC 43534 | ||||| | |||||| ||| ||||||||| ||||| | | | |||| ||| |||||||| CCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC AAAAGTCATT 120 GGTATATTAA ATCCATCGAC TAAAGAAATG TCCCAGAAAT CTAGGTTGTT AAACTGGTTC 43594 || ||||||| |||||||||| |||||||||| ||||| |||| ||| |||| | |||||||| | GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT AAACTGGTCC 180 AAGGCGTATT CGGTCAAGGT GTTTGGCGGT TTACCCCACC CGGTACACTG CAAGACTCCA 43654 |||||||| | ||| | ||| |||||| ||| || ||||| | |||||||||| |||||||| AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG TAAGACTCCT 240 CCACAATCAC CAGTCTCACA AGAACCTCTA CCAGCACCGT CAAAGTTGCA TTTAGTACGA 43714 |||||||||| |||| | ||| | |||||| || ||| | | ||||||||| ||||||| CCACAATCAC CAGTTTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA ACCAGTACGA 300 CCCCATATAC GTGCCATCTT AGTGCCCCTC AGTGCATTGA TGGTCCAAGT CTGGCCTTGA 43774 |||||||||| |||||||||| ||| |||||| | ||||||| || ||| || |||||| || CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT TTGGCCTCGA 360 TTGAGAC 43781 ||||||| TTGAGAC 367 hqPGS_C08HBa0235H18.1+_SGN-E204618- (43415 43781) ******************************************************************************** EST sequence 858 -strand 436 n (File: SGN-E206535-) 1 AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC 61 CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG 121 AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA 181 GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC 241 ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC 301 CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG ACCCATGTTT GGCCTCGATT 361 GAGACGTCGA CCACCGCCTA TCGGAGTCGA TGCCGCCCAA ACGGTGTATG GACAGTTGTT 421 GCGTACCTCA ATAGTG Predicted gene structure (within gDNA segment 41718 to 45487): Exon 1 43417 43781 ( 365 n); cDNA 1 365 ( 365 n); score: 0.852 MATCH C08HBa0235H18.1+ SGN-E206535- 0.852 365 0.837 C PGS_C08HBa0235H18.1+_SGN-E206535- (43417 43781) Alignment (genomic DNA sequence = upper lines): AGGATTGTTA CATCCTCCGG TTACTTTAAG TTGACTAGGG CATTCACCGT TTATATTGGC 43476 ||| |||||| |||||||| | ||| ||||| | ||| |||||||| | |||||||||| AGGGTTGTTA CATCCTCCAG GTACCTTAAG GGCGCGAGGA CATTCACCAT TTATATTGGC 60 GGTGCATTGA ATTGAGTGGC ATTTTCCTCC ACTGGAATTG GTTGTGGCGA AAGTCATCGG 43536 ||||| ||| |||| ||| | |||||||||| ||| | || |||| ||| | ||||||| || CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT GTTGGGGCAA AAGTCATTGG 120 TATATTAAAT CCATCGACTA AAGAAATGTC CCAGAAATCT AGGTTGTTAA ACTGGTTCAA 43596 ||||||||| |||||||||| |||||||||| ||| |||||| | |||| ||| |||||| ||| AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT AAGTTGCTAA ACTGGTCCAA 180 GGCGTATTCG GTCAAGGTGT TTGGCGGTTT ACCCCACCCG GTACACTGCA AGACTCCACC 43656 |||||| ||| | | ||||| |||| ||||| ||||| ||| |||||||| | |||||||||| GGCGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG GTACACTGTA AGACTCCACC 240 ACAATCACCA GTCTCACAAG AACCTCTACC AGCACCGTCA AAGTTGCATT TAGTACGACC 43716 |||||||||| |||| ||| | |||||| || ||| | | | |||||||| ||||||||| ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA AAGTTGCAAC CAGTACGACC 300 CCATATACGT GCCATCTTAG TGCCCCTCAG TGCATTGATG GTCCAAGTCT GGCCTTGATT 43776 |||||||||| |||||||||| | |||||| | ||||||||| ||| || | ||||| |||| CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG ACCCATGTTT GGCCTCGATT 360 GAGAC 43781 ||||| GAGAC 365 hqPGS_C08HBa0235H18.1+_SGN-E206535- (43417 43781) ******************************************************************************** EST sequence 1207 -strand 487 n (File: SGN-E209259-) 1 GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC 61 GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 121 ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 181 GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 241 CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 301 CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 361 AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG 421 CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA 481 GAAGATG Predicted gene structure (within gDNA segment 41728 to 46007): Exon 1 43418 43781 ( 364 n); cDNA 1 364 ( 364 n); score: 0.852 MATCH C08HBa0235H18.1+ SGN-E209259- 0.852 364 0.747 C PGS_C08HBa0235H18.1+_SGN-E209259- (43418 43781) Alignment (genomic DNA sequence = upper lines): GGATTGTTAC ATCCTCCGGT TACTTTAAGT TGACTAGGGC ATTCACCGTT TATATTGGCG 43477 || ||||||| ||||||| | ||| ||||| | ||| | ||||||| || ||||||||| GGGTTGTTAC ATCCTCCAGG TACCTTAAGG GCGCGAGGAC ATTCACCATT TATATTGGCC 60 GTGCATTGAA TTGAGTGGCA TTTTCCTCCA CTGGAATTGG TTGTGGCGAA AGTCATCGGT 43537 ||||| |||| ||| ||| || |||||||||| || | || | ||| ||| || |||||| || GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 120 ATATTAAATC CATCGACTAA AGAAATGTCC CAGAAATCTA GGTTGTTAAA CTGGTTCAAG 43597 |||||||||| |||||||||| |||||||||| || ||||||| |||| |||| ||||| |||| ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 180 GCGTATTCGG TCAAGGTGTT TGGCGGTTTA CCCCACCCGG TACACTGCAA GACTCCACCA 43657 ||||| |||| | |||||| ||| ||||| ||||| |||| ||||||| || |||||||||| GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 240 CAATCACCAG TCTCACAAGA ACCTCTACCA GCACCGTCAA AGTTGCATTT AGTACGACCC 43717 |||||||||| ||| ||| | |||||| || ||| | | || ||||||| |||||||||| CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 300 CATATACGTG CCATCTTAGT GCCCCTCAGT GCATTGATGG TCCAAGTCTG GCCTTGATTG 43777 |||||||||| |||||||||| |||||| | ||||||||| ||| || || |||| ||||| CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 360 AGAC 43781 |||| AGAC 364 hqPGS_C08HBa0235H18.1+_SGN-E209259- (43418 43781) ******************************************************************************** EST sequence 951 -strand 513 n (File: SGN-E207077-) 1 ATTGTTACAT CTCCGGGTAC CCTAANGTGA ACCAGGACAT TCACCATTTA TATTAGCCGT 61 ACAATGAATT GCATGGCATT TCCCTCCACT AGGATTGGTC GGGGCGAAAG TCATTGGAAT 121 ATTAAATCCA TCGACTAAAG AAATGTCCCA GAAATCTAGG TTGCTAAACT GGTCCAAGGC 181 GTACTCGGCC AGGGTGTTTG GTGGTTTGCC CCACCCGGTA CATTGCAAGA CCCCACCACA 241 ATCACCAGTC TGACATGAAC CTCTACCAGC ACCATCAAAG TTGCAATTCG TACGACCCCA 301 TATACGTGCC ATCTTAGTGC CCCTCGGTGC ATTGATGACC CATGTTTGGC CTCGATCAAG 361 ACGTCGACCA CCGCCTATTG GGGTCGACGC CGCCCAGACG GTGTATGGAC AGTTGTTGCG 421 TACCTCGAAA GTGGCAGCAT AAGTGTAAGT CACAAAAGCA AGAAGGAAGA AAACAAAAGA 481 AGATCTCAAG TAGGCCATGT TTGTGGAACT ATT Predicted gene structure (within gDNA segment 41748 to 46224): Exon 1 43420 43781 ( 362 n); cDNA 1 362 ( 362 n); score: 0.872 MATCH C08HBa0235H18.1+ SGN-E207077- 0.872 362 0.706 C PGS_C08HBa0235H18.1+_SGN-E207077- (43420 43781) Alignment (genomic DNA sequence = upper lines): ATTGTTACAT CCTCCGGTTA CTTTAAGTTG -ACTAGGGCA TTCACCGTTT ATATTGGCGG 43478 |||||||||| |||||| || | ||| || || ||| || |||||| ||| ||||| || | ATTGTTACAT -CTCCGGGTA CCCTAANGTG AACCAGGACA TTCACCATTT ATATTAGCCG 59 TGCATTGAAT TGAGTGGCAT TTTCCTCCAC TGGAATTGGT TGTGGCGAAA GTCATCGGTA 43538 | || ||||| || |||||| || ||||||| | | |||||| | ||||||| ||||| || | TACAATGAAT TGCATGGCAT TTCCCTCCAC TAGGATTGGT CGGGGCGAAA GTCATTGGAA 119 TATTAAATCC ATCGACTAAA GAAATGTCCC AGAAATCTAG GTTGTTAAAC TGGTTCAAGG 43598 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| |||| ||||| TATTAAATCC ATCGACTAAA GAAATGTCCC AGAAATCTAG GTTGCTAAAC TGGTCCAAGG 179 CGTATTCGGT CAAGGTGTTT GGCGGTTTAC CCCACCCGGT ACACTGCAAG ACTCCACCAC 43658 |||| |||| || ||||||| || ||||| | |||||||||| ||| |||||| || ||||||| CGTACTCGGC CAGGGTGTTT GGTGGTTTGC CCCACCCGGT ACATTGCAAG ACCCCACCAC 239 AATCACCAGT CTCACAAGAA CCTCTACCAG CACCGTCAAA GTTGCATTTA GTACGACCCC 43718 |||||||||| || ||| ||| |||||||||| |||| ||||| |||||| || |||||||||| AATCACCAGT CTGACATGAA CCTCTACCAG CACCATCAAA GTTGCAATTC GTACGACCCC 299 ATATACGTGC CATCTTAGTG CCCCTCAGTG CATTGATGGT CCAAGTCTGG CCTTGATTGA 43778 |||||||||| |||||||||| |||||| ||| |||||||| ||| || ||| ||| ||| | ATATACGTGC CATCTTAGTG CCCCTCGGTG CATTGATGAC CCATGTTTGG CCTCGATCAA 359 GAC 43781 ||| GAC 362 hqPGS_C08HBa0235H18.1+_SGN-E207077- (43420 43781) ******************************************************************************** EST sequence 829 -strand 493 n (File: SGN-E205594-) 1 GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT 61 GCAATGAATT GCGTGACATT TTCCTCCATT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT 121 ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC 181 GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA 241 ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA 301 TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG 361 ACGTCGACCA CCGCCTATCG GAGTTGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG 421 TACCTCAATA GTGGCAGCAT AAGCACCAGT CACACAAAGA AGGAAGAAGA GAACAAAAGA 481 AGATGTCAAG TAG Predicted gene structure (within gDNA segment 41748 to 46087): Exon 1 43421 43781 ( 361 n); cDNA 2 362 ( 361 n); score: 0.850 MATCH C08HBa0235H18.1+ SGN-E205594- 0.850 361 0.732 C PGS_C08HBa0235H18.1+_SGN-E205594- (43421 43781) Alignment (genomic DNA sequence = upper lines): TTGTTACATC CTCCGGTTAC TTTAAGTTGA CTAGGGCATT CACCGTTTAT ATTGGCGGTG 43480 |||||||||| |||| | ||| ||||| | ||| |||| |||| ||||| |||||| ||| TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 61 CATTGAATTG AGTGGCATTT TCCTCCACTG GAATTGGTTG TGGCGAAAGT CATCGGTATA 43540 || ||||||| ||| ||||| ||||||| | | || |||| ||| ||||| ||| || ||| CAATGAATTG CGTGACATTT TCCTCCATTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 121 TTAAATCCAT CGACTAAAGA AATGTCCCAG AAATCTAGGT TGTTAAACTG GTTCAAGGCG 43600 |||||||||| |||||||||| ||||||||| ||||||| || || ||||||| || ||||||| TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 181 TATTCGGTCA AGGTGTTTGG CGGTTTACCC CACCCGGTAC ACTGCAAGAC TCCACCACAA 43660 || |||| | ||||||||| ||||| ||| || ||||||| |||| ||||| |||||||||| TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA 241 TCACCAGTCT CACAAGAACC TCTACCAGCA CCGTCAAAGT TGCATTTAGT ACGACCCCAT 43720 |||||||||| ||| | ||| ||| || ||| | | ||||| |||| ||| |||||||||| TCACCAGTCT GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT 301 ATACGTGCCA TCTTAGTGCC CCTCAGTGCA TTGATGGTCC AAGTCTGGCC TTGATTGAGA 43780 |||||||||| ||||||| || |||| | ||| |||||| || | || ||||| | |||||||| ATACGTGCCA TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA 361 C 43781 | C 362 hqPGS_C08HBa0235H18.1+_SGN-E205594- (43421 43781) ******************************************************************************** EST sequence 892 -strand 455 n (File: SGN-E205290-) 1 GTTGTTACAT CCTCCAGGTA CCTTAAGGGC GCGAGGACAT TCACCATTTA TATTGGCCGT 61 GCAATGAATT GCGTGACATT TTCCTCCACT AGGTTTTGTT GGGGCAAAAG TCATTGGAAT 121 ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC 181 GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA 241 ATCACCAGTC TGACATGTAC CTCTGCCTGC AGCATTAAAG TTGCAACCAG TACGACCCCA 301 TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG 361 ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG GTGTATCCAC AGTTGTTGCG 421 TACCTCAATA GTGGCAGCAT AAGTATAAGT CACAC Predicted gene structure (within gDNA segment 41748 to 45707): Exon 1 43421 43781 ( 361 n); cDNA 2 362 ( 361 n); score: 0.853 MATCH C08HBa0235H18.1+ SGN-E205290- 0.853 361 0.793 C PGS_C08HBa0235H18.1+_SGN-E205290- (43421 43781) Alignment (genomic DNA sequence = upper lines): TTGTTACATC CTCCGGTTAC TTTAAGTTGA CTAGGGCATT CACCGTTTAT ATTGGCGGTG 43480 |||||||||| |||| | ||| ||||| | ||| |||| |||| ||||| |||||| ||| TTGTTACATC CTCCAGGTAC CTTAAGGGCG CGAGGACATT CACCATTTAT ATTGGCCGTG 61 CATTGAATTG AGTGGCATTT TCCTCCACTG GAATTGGTTG TGGCGAAAGT CATCGGTATA 43540 || ||||||| ||| ||||| ||||||||| | || |||| ||| ||||| ||| || ||| CAATGAATTG CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA 121 TTAAATCCAT CGACTAAAGA AATGTCCCAG AAATCTAGGT TGTTAAACTG GTTCAAGGCG 43600 |||||||||| |||||||||| ||||||||| ||||||| || || ||||||| || ||||||| TTAAATCCAT CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG 181 TATTCGGTCA AGGTGTTTGG CGGTTTACCC CACCCGGTAC ACTGCAAGAC TCCACCACAA 43660 || |||| | ||||||||| ||||| ||| || ||||||| |||| ||||| |||||||||| TACTCGGCTA GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA 241 TCACCAGTCT CACAAGAACC TCTACCAGCA CCGTCAAAGT TGCATTTAGT ACGACCCCAT 43720 |||||||||| ||| | ||| ||| || ||| | | ||||| |||| ||| |||||||||| TCACCAGTCT GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT 301 ATACGTGCCA TCTTAGTGCC CCTCAGTGCA TTGATGGTCC AAGTCTGGCC TTGATTGAGA 43780 |||||||||| ||||||| || |||| | ||| |||||| || | || ||||| | |||||||| ATACGTGCCA TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA 361 C 43781 | C 362 hqPGS_C08HBa0235H18.1+_SGN-E205290- (43421 43781) ******************************************************************************** EST sequence 512 -strand 474 n (File: SGN-E250954-) 1 TTTACATCCT CCAGGTACCT TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA 61 ATGAATTGCG TGACATTTTC CTCCACTAGG TTTTGTTGGG GCAAAAGTCA TTGGAATATT 121 AAATCCATCG ACTAAAGAAA TGTCCCAAAA ATCTAAGTTG CTAAACTGGT CCAAGGCGTA 181 CTCGGCTAGG GTGTTTGGGG GTTTGCCCCA TCCGGTACAC TGTAAGACTC CACCACAATC 241 ACCAGTCTGA CATGTACCTC TGCCTGCAGC ATTAAAGTTG CAACCAGTAC GACCCCATAT 301 ACGTGCCATC TTAGTTCCCC TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG 361 TCGACCACCG CCTATCGGAG TCGATGCCGC CCAAACGGTG TATGGACAGT TGTTGCGTAC 421 CTCAATAGTG CGATAGTAAG TATAAGTCAC ACAAAGAAGG AAGAAGAGAA CAAA Predicted gene structure (within gDNA segment 41778 to 45927): Exon 1 43424 43781 ( 358 n); cDNA 2 359 ( 358 n); score: 0.852 MATCH C08HBa0235H18.1+ SGN-E250954- 0.852 358 0.755 C PGS_C08HBa0235H18.1+_SGN-E250954- (43424 43781) Alignment (genomic DNA sequence = upper lines): TTACATCCTC CGGTTACTTT AAGTTGACTA GGGCATTCAC CGTTTATATT GGCGGTGCAT 43483 |||||||||| | | ||| || ||| | | || ||||||| | |||||||| ||| ||||| TTACATCCTC CAGGTACCTT AAGGGCGCGA GGACATTCAC CATTTATATT GGCCGTGCAA 61 TGAATTGAGT GGCATTTTCC TCCACTGGAA TTGGTTGTGG CGAAAGTCAT CGGTATATTA 43543 ||||||| || | |||||||| |||||| | || |||| || | |||||||| || |||||| TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT TGGAATATTA 121 AATCCATCGA CTAAAGAAAT GTCCCAGAAA TCTAGGTTGT TAAACTGGTT CAAGGCGTAT 43603 |||||||||| |||||||||| |||||| ||| |||| |||| ||||||||| ||||||||| AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGCGTAC 181 TCGGTCAAGG TGTTTGGCGG TTTACCCCAC CCGGTACACT GCAAGACTCC ACCACAATCA 43663 |||| | || ||||||| || ||| ||||| |||||||||| | |||||||| |||||||||| TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC ACCACAATCA 241 CCAGTCTCAC AAGAACCTCT ACCAGCACCG TCAAAGTTGC ATTTAGTACG ACCCCATATA 43723 ||||||| || | | |||||| || ||| | | |||||||| | |||||| |||||||||| CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG ACCCCATATA 301 CGTGCCATCT TAGTGCCCCT CAGTGCATTG ATGGTCCAAG TCTGGCCTTG ATTGAGAC 43781 |||||||||| |||| ||||| | | |||||| ||| ||| | | |||||| | |||||||| CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG TTTGGCCTCG ATTGAGAC 359 hqPGS_C08HBa0235H18.1+_SGN-E250954- (43424 43781) ******************************************************************************** EST sequence 569 -strand 391 n (File: SGN-E201143-) 1 TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC 61 CTCCACTAGG TTTTGTTGGG GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA 121 TGTCCCAAAA ATCTAAGTTG CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG 181 GTTTGCCCCA TCCGGTACAC TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC 241 TGCCTGCAGC ATTAAAGTTG CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC 301 TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGACG TCGACCACCG CCTATCGGAG 361 TCGATGCCGC CCAAGCGGTG TATGGACAGT T Predicted gene structure (within gDNA segment 41978 to 45297): Exon 1 43443 43781 ( 339 n); cDNA 1 339 ( 339 n); score: 0.853 MATCH C08HBa0235H18.1+ SGN-E201143- 0.853 339 0.867 C PGS_C08HBa0235H18.1+_SGN-E201143- (43443 43781) Alignment (genomic DNA sequence = upper lines): TAAGTTGACT AGGGCATTCA CCGTTTATAT TGGCGGTGCA TTGAATTGAG TGGCATTTTC 43502 |||| | ||| |||||| || ||||||| |||| ||||| ||||||| | || ||||||| TAAGGGCGCG AGGACATTCA CCATTTATAT TGGCCGTGCA ATGAATTGCG TGACATTTTC 60 CTCCACTGGA ATTGGTTGTG GCGAAAGTCA TCGGTATATT AAATCCATCG ACTAAAGAAA 43562 ||||||| | || |||| | || ||||||| | || ||||| |||||||||| |||||||||| CTCCACTAGG TTTTGTTGGG GCAAAAGTCA TTGGAATATT AAATCCATCG ACTAAAGAAA 120 TGTCCCAGAA ATCTAGGTTG TTAAACTGGT TCAAGGCGTA TTCGGTCAAG GTGTTTGGCG 43622 ||||||| || ||||| |||| ||||||||| ||||||||| |||| | | |||||||| | TGTCCCAAAA ATCTAAGTTG CTAAACTGGT CCAAGGCGTA CTCGGCTAGG GTGTTTGGGG 180 GTTTACCCCA CCCGGTACAC TGCAAGACTC CACCACAATC ACCAGTCTCA CAAGAACCTC 43682 |||| ||||| ||||||||| || ||||||| |||||||||| |||||||| | || | ||||| GTTTGCCCCA TCCGGTACAC TGTAAGACTC CACCACAATC ACCAGTCTGA CATGTACCTC 240 TACCAGCACC GTCAAAGTTG CATTTAGTAC GACCCCATAT ACGTGCCATC TTAGTGCCCC 43742 | || ||| | | ||||||| || ||||| |||||||||| |||||||||| ||||| |||| TGCCTGCAGC ATTAAAGTTG CAACCAGTAC GACCCCATAT ACGTGCCATC TTAGTTCCCC 300 TCAGTGCATT GATGGTCCAA GTCTGGCCTT GATTGAGAC 43781 || | ||||| |||| ||| || |||||| ||||||||| TCGGAGCATT GATGACCCAT GTTTGGCCTC GATTGAGAC 339 hqPGS_C08HBa0235H18.1+_SGN-E201143- (43443 43781) ******************************************************************************** EST sequence 736 -strand 491 n (File: SGN-E205046-) 1 AAGTGAACCA GGACATTCAC CATTTATATT AGCCGTACAA TGAATTGCAT GGCATTTCCC 61 TCCACTAGGA TTGGTCGGGG CGAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT 121 GTCCCAGAAA TCTAGGTTGC TAAACTGGTC CAAGGCGTAC TCGGCCAGGG TGTTTGGTGG 181 TTTGCCCCAC CCGGTACATT GCAAGACCCC ACCACAATCA CCAGTCTGAC ATGAACCTCT 241 ACCAGCACCA TCAAAGTTGC AATTCGTACG ACCCCATATA CGTGCCATCT TAGTGCCCCT 301 CGGTGCATTG ATGACCCATG TTTGGCCTCG ATCAAGACGT CGACCACCGC CTATTGGGGT 361 CGACGCCGCC CAGACGGTGT ATGGACAGTT GTTGCGTACC TCGAAAGTGG CAGCATAAGT 421 GTAAGTCACA AAAGCAAGAA GGAAGAAAAC AACAGAAGAT CTCAAGTAGG CCATGTTTGT 481 GGAACTATTT T Predicted gene structure (within gDNA segment 41988 to 46244): Exon 1 43444 43781 ( 338 n); cDNA 1 338 ( 338 n); score: 0.882 MATCH C08HBa0235H18.1+ SGN-E205046- 0.882 338 0.688 C PGS_C08HBa0235H18.1+_SGN-E205046- (43444 43781) Alignment (genomic DNA sequence = upper lines): AAGTTGACTA GGGCATTCAC CGTTTATATT GGCGGTGCAT TGAATTGAGT GGCATTTTCC 43503 |||| || | || ||||||| | |||||||| || || || ||||||| | ||||||| || AAGTGAACCA GGACATTCAC CATTTATATT AGCCGTACAA TGAATTGCAT GGCATTTCCC 60 TCCACTGGAA TTGGTTGTGG CGAAAGTCAT CGGTATATTA AATCCATCGA CTAAAGAAAT 43563 |||||| | | ||||| | || |||||||||| || |||||| |||||||||| |||||||||| TCCACTAGGA TTGGTCGGGG CGAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT 120 GTCCCAGAAA TCTAGGTTGT TAAACTGGTT CAAGGCGTAT TCGGTCAAGG TGTTTGGCGG 43623 |||||||||| ||||||||| ||||||||| ||||||||| |||| || || ||||||| || GTCCCAGAAA TCTAGGTTGC TAAACTGGTC CAAGGCGTAC TCGGCCAGGG TGTTTGGTGG 180 TTTACCCCAC CCGGTACACT GCAAGACTCC ACCACAATCA CCAGTCTCAC AAGAACCTCT 43683 ||| |||||| |||||||| | ||||||| || |||||||||| ||||||| || | |||||||| TTTGCCCCAC CCGGTACATT GCAAGACCCC ACCACAATCA CCAGTCTGAC ATGAACCTCT 240 ACCAGCACCG TCAAAGTTGC ATTTAGTACG ACCCCATATA CGTGCCATCT TAGTGCCCCT 43743 ||||||||| |||||||||| | || ||||| |||||||||| |||||||||| |||||||||| ACCAGCACCA TCAAAGTTGC AATTCGTACG ACCCCATATA CGTGCCATCT TAGTGCCCCT 300 CAGTGCATTG ATGGTCCAAG TCTGGCCTTG ATTGAGAC 43781 | |||||||| ||| ||| | | |||||| | || |||| CGGTGCATTG ATGACCCATG TTTGGCCTCG ATCAAGAC 338 hqPGS_C08HBa0235H18.1+_SGN-E205046- (43444 43781) ******************************************************************************** EST sequence 610 -strand 463 n (File: SGN-E264072-) 1 AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 61 CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 121 TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT 181 TTGCCCCATC CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG 241 CCTGCAGCAT TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC 301 GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC 361 GATGCCGCCC AAACGGTGTA TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA 421 TAAGTCACAC AAAGAAGGAA GAAGAGAACA AAAGAAGATG TCA Predicted gene structure (within gDNA segment 41998 to 46037): Exon 1 43445 43781 ( 337 n); cDNA 1 337 ( 337 n); score: 0.852 MATCH C08HBa0235H18.1+ SGN-E264072- 0.852 337 0.728 C PGS_C08HBa0235H18.1+_SGN-E264072- (43445 43781) Alignment (genomic DNA sequence = upper lines): AGTTGACTAG GGCATTCACC GTTTATATTG GCGGTGCATT GAATTGAGTG GCATTTTCCT 43504 || | || | |||||||| ||||||||| || ||||| | |||||| ||| ||||||||| AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 60 CCACTGGAAT TGGTTGTGGC GAAAGTCATC GGTATATTAA ATCCATCGAC TAAAGAAATG 43564 ||||| | | | |||| ||| |||||||| || ||||||| |||||||||| |||||||||| CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 120 TCCCAGAAAT CTAGGTTGTT AAACTGGTTC AAGGCGTATT CGGTCAAGGT GTTTGGCGGT 43624 ||||| |||| ||| |||| | |||||||| | |||||||| | ||| | ||| |||||| ||| TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT 180 TTACCCCACC CGGTACACTG CAAGACTCCA CCACAATCAC CAGTCTCACA AGAACCTCTA 43684 || ||||| | |||||||||| ||||||||| |||||||||| |||||| ||| | |||||| TTGCCCCATC CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG 240 CCAGCACCGT CAAAGTTGCA TTTAGTACGA CCCCATATAC GTGCCATCTT AGTGCCCCTC 43744 || ||| | | ||||||||| ||||||| |||||||||| |||||||||| ||| |||||| CCTGCAGCAT TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC 300 AGTGCATTGA TGGTCCAAGT CTGGCCTTGA TTGAGAC 43781 | ||||||| || ||| || |||||| || ||||||| GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGAC 337 hqPGS_C08HBa0235H18.1+_SGN-E264072- (43445 43781) ******************************************************************************** EST sequence 821 -strand 477 n (File: SGN-E202164-) 1 AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 61 CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 121 TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT 181 TTGCCCCATC CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG 241 CCTGCAGCAT TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC 301 GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC 361 GATGCCGCCC AAACGGTGTA TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA 421 TAAGTCACAC AAAGAAGGAA GAAGAGAACA AAAGAAGATG TCAAGTAGCC CATGTTT Predicted gene structure (within gDNA segment 41998 to 46177): Exon 1 43445 43781 ( 337 n); cDNA 1 337 ( 337 n); score: 0.852 MATCH C08HBa0235H18.1+ SGN-E202164- 0.852 337 0.706 C PGS_C08HBa0235H18.1+_SGN-E202164- (43445 43781) Alignment (genomic DNA sequence = upper lines): AGTTGACTAG GGCATTCACC GTTTATATTG GCGGTGCATT GAATTGAGTG GCATTTTCCT 43504 || | || | |||||||| ||||||||| || ||||| | |||||| ||| ||||||||| AGGGCGCGAG GACATTCACC ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT 60 CCACTGGAAT TGGTTGTGGC GAAAGTCATC GGTATATTAA ATCCATCGAC TAAAGAAATG 43564 ||||| | | | |||| ||| |||||||| || ||||||| |||||||||| |||||||||| CCACTAGGTT TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG 120 TCCCAGAAAT CTAGGTTGTT AAACTGGTTC AAGGCGTATT CGGTCAAGGT GTTTGGCGGT 43624 ||||| |||| ||| |||| | |||||||| | |||||||| | ||| | ||| |||||| ||| TCCCAAAAAT CTAAGTTGCT AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT 180 TTACCCCACC CGGTACACTG CAAGACTCCA CCACAATCAC CAGTCTCACA AGAACCTCTA 43684 || ||||| | |||||||||| ||||||||| |||||||||| |||||| ||| | |||||| TTGCCCCATC CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG 240 CCAGCACCGT CAAAGTTGCA TTTAGTACGA CCCCATATAC GTGCCATCTT AGTGCCCCTC 43744 || ||| | | ||||||||| ||||||| |||||||||| |||||||||| ||| |||||| CCTGCAGCAT TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC 300 AGTGCATTGA TGGTCCAAGT CTGGCCTTGA TTGAGAC 43781 | ||||||| || ||| || |||||| || ||||||| GGAGCATTGA TGACCCATGT TTGGCCTCGA TTGAGAC 337 hqPGS_C08HBa0235H18.1+_SGN-E202164- (43445 43781) ******************************************************************************** EST sequence 551 -strand 477 n (File: SGN-E202521-) 1 GACATTCACC ATTTATATTA GCCGTACAAT GAATTGCATG GCATTTCCCT CCACTAGGAT 61 TGGTCGGGGC GAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAGAAAT 121 CTAGGTTGCT AAACTGGTCC AAGGCGTACT CGGCCAGGGT GTTTGGTGGT TTGCCCCACC 181 CGGTACATTG CAAGACCCCA CCACAATCAC CAGTCTGACA TGAACCTCTA CCAGCACCAT 241 CAAAGTTGCA ATTCGTACGA CCCCATATAC GTGCCATCTT AGTGCCCCTC GGTGCATTGA 301 TGACCCATGT TTGGCCTCGA TCAAGACGTC GACCACCGCC TATTGGGGTC GACGCCGCCC 361 AGACGGTGTA TGGACAGTTG TTGCGTACCT CGAAAGTGGC AGCATAAGTG TAAGTCACAA 421 AAGCAAGAAG GAAGAAAACA AAAGAAGATC TCAAGTAGGC CATGTTTGTG GAACTAT Predicted gene structure (within gDNA segment 42098 to 46214): Exon 1 43457 43781 ( 325 n); cDNA 3 327 ( 325 n); score: 0.889 MATCH C08HBa0235H18.1+ SGN-E202521- 0.889 325 0.681 C PGS_C08HBa0235H18.1+_SGN-E202521- (43457 43781) Alignment (genomic DNA sequence = upper lines): CATTCACCGT TTATATTGGC GGTGCATTGA ATTGAGTGGC ATTTTCCTCC ACTGGAATTG 43516 |||||||| | ||||||| || || || ||| |||| |||| |||| ||||| ||| | |||| CATTCACCAT TTATATTAGC CGTACAATGA ATTGCATGGC ATTTCCCTCC ACTAGGATTG 62 GTTGTGGCGA AAGTCATCGG TATATTAAAT CCATCGACTA AAGAAATGTC CCAGAAATCT 43576 || | ||||| ||||||| || ||||||||| |||||||||| |||||||||| |||||||||| GTCGGGGCGA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAGAAATCT 122 AGGTTGTTAA ACTGGTTCAA GGCGTATTCG GTCAAGGTGT TTGGCGGTTT ACCCCACCCG 43636 |||||| ||| |||||| ||| |||||| ||| | || ||||| |||| ||||| ||||||||| AGGTTGCTAA ACTGGTCCAA GGCGTACTCG GCCAGGGTGT TTGGTGGTTT GCCCCACCCG 182 GTACACTGCA AGACTCCACC ACAATCACCA GTCTCACAAG AACCTCTACC AGCACCGTCA 43696 ||||| |||| |||| ||||| |||||||||| |||| ||| | |||||||||| |||||| ||| GTACATTGCA AGACCCCACC ACAATCACCA GTCTGACATG AACCTCTACC AGCACCATCA 242 AAGTTGCATT TAGTACGACC CCATATACGT GCCATCTTAG TGCCCCTCAG TGCATTGATG 43756 |||||||| | | |||||||| |||||||||| |||||||||| |||||||| | |||||||||| AAGTTGCAAT TCGTACGACC CCATATACGT GCCATCTTAG TGCCCCTCGG TGCATTGATG 302 GTCCAAGTCT GGCCTTGATT GAGAC 43781 ||| || | ||||| ||| |||| ACCCATGTTT GGCCTCGATC AAGAC 327 hqPGS_C08HBa0235H18.1+_SGN-E202521- (43457 43781) ******************************************************************************** EST sequence 838 -strand 447 n (File: SGN-E203940-) 1 ACATTCACCA TTTATATTGA CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT 61 TGTTGGGGCA AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC 121 TAAGTTGCTA AACTGGTCCA AGGTGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC 181 GGTACACTGT AAGACTCCAC CGCAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT 241 AAAGTTGCAT CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT 301 GACCCATGTT TGGCCTCGAT TGAGACGTCG ACCACCGCCT ATCGGAGTCG ATGCCGCCCA 361 AACGGTGTAT GGACAGTTGT TGCGTACTTC AATAGTGGCA GCATAAGTAT AAGTCACACA 421 AACAAGGAAG AAGAGAGCAA AAGAAGA Predicted gene structure (within gDNA segment 42108 to 45987): Exon 1 43457 43781 ( 325 n); cDNA 2 326 ( 325 n); score: 0.858 MATCH C08HBa0235H18.1+ SGN-E203940- 0.858 325 0.727 C PGS_C08HBa0235H18.1+_SGN-E203940- (43457 43781) Alignment (genomic DNA sequence = upper lines): CATTCACCGT TTATATTGGC GGTGCATTGA ATTGAGTGGC ATTTTCCTCC ACTGGAATTG 43516 |||||||| | |||||||| | ||||| ||| |||| ||| | |||||||||| ||| | || CATTCACCAT TTATATTGAC CGTGCAATGA ATTGCGTGAC ATTTTCCTCC ACTAGGTTTT 61 GTTGTGGCGA AAGTCATCGG TATATTAAAT CCATCGACTA AAGAAATGTC CCAGAAATCT 43576 |||| ||| | ||||||| || ||||||||| |||||||||| |||||||||| ||| |||||| GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATCT 121 AGGTTGTTAA ACTGGTTCAA GGCGTATTCG GTCAAGGTGT TTGGCGGTTT ACCCCACCCG 43636 | |||| ||| |||||| ||| || ||| ||| | | ||||| |||| ||||| ||||| ||| AAGTTGCTAA ACTGGTCCAA GGTGTACTCG GCTAGGGTGT TTGGGGGTTT GCCCCATCCG 181 GTACACTGCA AGACTCCACC ACAATCACCA GTCTCACAAG AACCTCTACC AGCACCGTCA 43696 |||||||| | |||||||||| ||||||||| |||| ||| | |||||| || ||| | | | GTACACTGTA AGACTCCACC GCAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 241 AAGTTGCATT TAGTACGACC CCATATACGT GCCATCTTAG TGCCCCTCAG TGCATTGATG 43756 ||||||||| ||||||||| |||||||||| |||||||||| | |||||| | ||||||||| AAGTTGCATC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 301 GTCCAAGTCT GGCCTTGATT GAGAC 43781 ||| || | ||||| |||| ||||| ACCCATGTTT GGCCTCGATT GAGAC 326 hqPGS_C08HBa0235H18.1+_SGN-E203940- (43457 43781) ******************************************************************************** EST sequence 708 -strand 421 n (File: SGN-E205056-) 1 CATTTATATT GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG 61 CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC 121 TAAACTGGTC CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT 181 GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC 241 AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG 301 TTTGGCCTCG ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT 361 ATGGACAGTT GTTGCGTACC TCAATAGTGG CAGCATAAGT ATAAGTCACA CAAAGAAGGA 421 A Predicted gene structure (within gDNA segment 42188 to 45807): Exon 1 43466 43781 ( 316 n); cDNA 3 318 ( 316 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E205056- 0.864 316 0.751 C PGS_C08HBa0235H18.1+_SGN-E205056- (43466 43781) Alignment (genomic DNA sequence = upper lines): TTTATATTGG CGGTGCATTG AATTGAGTGG CATTTTCCTC CACTGGAATT GGTTGTGGCG 43525 |||||||||| | ||||| || ||||| ||| |||||||||| |||| | || |||| ||| TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT TGTTGGGGCA 62 AAAGTCATCG GTATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC TAGGTTGTTA 43585 |||||||| | | |||||||| |||||||||| |||||||||| |||| ||||| || |||| || AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA 122 AACTGGTTCA AGGCGTATTC GGTCAAGGTG TTTGGCGGTT TACCCCACCC GGTACACTGC 43645 ||||||| || ||||||| || || | |||| ||||| |||| | ||||| || ||||||||| AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC GGTACACTGT 182 AAGACTCCAC CACAATCACC AGTCTCACAA GAACCTCTAC CAGCACCGTC AAAGTTGCAT 43705 |||||||||| |||||||||| ||||| ||| | |||||| | | ||| | | ||||||||| AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT AAAGTTGCAA 242 TTAGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCA GTGCATTGAT GGTCCAAGTC 43765 |||||||| |||||||||| |||||||||| || |||||| | |||||||| | ||| || CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT GACCCATGTT 302 TGGCCTTGAT TGAGAC 43781 |||||| ||| |||||| TGGCCTCGAT TGAGAC 318 hqPGS_C08HBa0235H18.1+_SGN-E205056- (43466 43781) ******************************************************************************** EST sequence 722 -strand 457 n (File: SGN-E205100-) 1 ATTTATATTG GCCGTGCAAT GAATTGCGTG ACATTTTCCT CCACTAGGTT TTGTTGGGGC 61 AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT CTAAGTTGCT 121 AAACTGGTCC AAGGCGTACT CGGCTAGGGT GTTTGGGGGT TTGCCCCATC CGGTACACTG 181 TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT TAAAGTTGCA 241 ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA TGACCCATGT 301 TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC AAACGGTGTA 361 TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC AAAGAAGGAA 421 GAAGAGAACA AAAGAAGATG TCAAGTAGCC CATGTTT Predicted gene structure (within gDNA segment 42198 to 46177): Exon 1 43466 43781 ( 316 n); cDNA 2 317 ( 316 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E205100- 0.864 316 0.691 C PGS_C08HBa0235H18.1+_SGN-E205100- (43466 43781) Alignment (genomic DNA sequence = upper lines): TTTATATTGG CGGTGCATTG AATTGAGTGG CATTTTCCTC CACTGGAATT GGTTGTGGCG 43525 |||||||||| | ||||| || ||||| ||| |||||||||| |||| | || |||| ||| TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT TGTTGGGGCA 61 AAAGTCATCG GTATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC TAGGTTGTTA 43585 |||||||| | | |||||||| |||||||||| |||||||||| |||| ||||| || |||| || AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA 121 AACTGGTTCA AGGCGTATTC GGTCAAGGTG TTTGGCGGTT TACCCCACCC GGTACACTGC 43645 ||||||| || ||||||| || || | |||| ||||| |||| | ||||| || ||||||||| AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC GGTACACTGT 181 AAGACTCCAC CACAATCACC AGTCTCACAA GAACCTCTAC CAGCACCGTC AAAGTTGCAT 43705 |||||||||| |||||||||| ||||| ||| | |||||| | | ||| | | ||||||||| AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT AAAGTTGCAA 241 TTAGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCA GTGCATTGAT GGTCCAAGTC 43765 |||||||| |||||||||| |||||||||| || |||||| | |||||||| | ||| || CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT GACCCATGTT 301 TGGCCTTGAT TGAGAC 43781 |||||| ||| |||||| TGGCCTCGAT TGAGAC 317 hqPGS_C08HBa0235H18.1+_SGN-E205100- (43466 43781) ******************************************************************************** EST sequence 1029 -strand 467 n (File: SGN-E208115-) 1 ATTTATATTA GCCGTACAAT GAATTGCATG GCATTTCCCT CCACTAGGAT TGGTCGGGGC 61 GAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAGAAAT CTAGGTTGCT 121 AAACTGGTCC AAGGCGTACT CGGCCAGGGT GTTTGGTGGT TTGCCCCACC CGGTACATTG 181 CAAGACCCCA CCACAATCAC CAGTCTGACA TGAACCTCTA CCAGCACCAT CAAAGTTGCA 241 ATTCGTACGA CCCCATATAC GTGCCATCTT AGTGCCCCTC GGTGCATTGA TGACCCATGT 301 TTGGCCTCGA TCAAGACGTC GACCACCGCC TATTGGGGTC GACGCCGCCC AGACGGTGTA 361 TGGACAGTTG TTGCGTACCT CGAAAGTGGC AGCATAAGTG TAAGTCACAA AAGCAAGAAG 421 GAAGAAAACA AAAGAAGATC TCAAGTAGGC CATGTTTGTG GAACTAT Predicted gene structure (within gDNA segment 42198 to 46214): Exon 1 43466 43781 ( 316 n); cDNA 2 317 ( 316 n); score: 0.889 MATCH C08HBa0235H18.1+ SGN-E208115- 0.889 316 0.677 C PGS_C08HBa0235H18.1+_SGN-E208115- (43466 43781) Alignment (genomic DNA sequence = upper lines): TTTATATTGG CGGTGCATTG AATTGAGTGG CATTTTCCTC CACTGGAATT GGTTGTGGCG 43525 |||||||| | | || || || ||||| ||| ||||| |||| |||| | ||| ||| | |||| TTTATATTAG CCGTACAATG AATTGCATGG CATTTCCCTC CACTAGGATT GGTCGGGGCG 61 AAAGTCATCG GTATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC TAGGTTGTTA 43585 |||||||| | | |||||||| |||||||||| |||||||||| |||||||||| ||||||| || AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC TAGGTTGCTA 121 AACTGGTTCA AGGCGTATTC GGTCAAGGTG TTTGGCGGTT TACCCCACCC GGTACACTGC 43645 ||||||| || ||||||| || || || |||| ||||| |||| | |||||||| |||||| ||| AACTGGTCCA AGGCGTACTC GGCCAGGGTG TTTGGTGGTT TGCCCCACCC GGTACATTGC 181 AAGACTCCAC CACAATCACC AGTCTCACAA GAACCTCTAC CAGCACCGTC AAAGTTGCAT 43705 ||||| |||| |||||||||| ||||| ||| |||||||||| ||||||| || ||||||||| AAGACCCCAC CACAATCACC AGTCTGACAT GAACCTCTAC CAGCACCATC AAAGTTGCAA 241 TTAGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCA GTGCATTGAT GGTCCAAGTC 43765 || ||||||| |||||||||| |||||||||| ||||||||| |||||||||| | ||| || TTCGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCG GTGCATTGAT GACCCATGTT 301 TGGCCTTGAT TGAGAC 43781 |||||| ||| |||| TGGCCTCGAT CAAGAC 317 hqPGS_C08HBa0235H18.1+_SGN-E208115- (43466 43781) ******************************************************************************** EST sequence 958 -strand 389 n (File: SGN-E207079-) 1 CATTTATATT GGCCGTGCAA TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG 61 CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC 121 TAAACTGGTC CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT 181 GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC 241 AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG 301 TTTGGCCTCG ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC CAAACGGTGT 361 ATGGACAGTT GTTGCGTACC TCAATAGTG Predicted gene structure (within gDNA segment 42188 to 45487): Exon 1 43466 43781 ( 316 n); cDNA 3 318 ( 316 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E207079- 0.864 316 0.812 C PGS_C08HBa0235H18.1+_SGN-E207079- (43466 43781) Alignment (genomic DNA sequence = upper lines): TTTATATTGG CGGTGCATTG AATTGAGTGG CATTTTCCTC CACTGGAATT GGTTGTGGCG 43525 |||||||||| | ||||| || ||||| ||| |||||||||| |||| | || |||| ||| TTTATATTGG CCGTGCAATG AATTGCGTGA CATTTTCCTC CACTAGGTTT TGTTGGGGCA 62 AAAGTCATCG GTATATTAAA TCCATCGACT AAAGAAATGT CCCAGAAATC TAGGTTGTTA 43585 |||||||| | | |||||||| |||||||||| |||||||||| |||| ||||| || |||| || AAAGTCATTG GAATATTAAA TCCATCGACT AAAGAAATGT CCCAAAAATC TAAGTTGCTA 122 AACTGGTTCA AGGCGTATTC GGTCAAGGTG TTTGGCGGTT TACCCCACCC GGTACACTGC 43645 ||||||| || ||||||| || || | |||| ||||| |||| | ||||| || ||||||||| AACTGGTCCA AGGCGTACTC GGCTAGGGTG TTTGGGGGTT TGCCCCATCC GGTACACTGT 182 AAGACTCCAC CACAATCACC AGTCTCACAA GAACCTCTAC CAGCACCGTC AAAGTTGCAT 43705 |||||||||| |||||||||| ||||| ||| | |||||| | | ||| | | ||||||||| AAGACTCCAC CACAATCACC AGTCTGACAT GTACCTCTGC CTGCAGCATT AAAGTTGCAA 242 TTAGTACGAC CCCATATACG TGCCATCTTA GTGCCCCTCA GTGCATTGAT GGTCCAAGTC 43765 |||||||| |||||||||| |||||||||| || |||||| | |||||||| | ||| || CCAGTACGAC CCCATATACG TGCCATCTTA GTTCCCCTCG GAGCATTGAT GACCCATGTT 302 TGGCCTTGAT TGAGAC 43781 |||||| ||| |||||| TGGCCTCGAT TGAGAC 318 hqPGS_C08HBa0235H18.1+_SGN-E207079- (43466 43781) ******************************************************************************** EST sequence 1025 -strand 425 n (File: SGN-E276456-) 1 GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 61 ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 121 GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 181 CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 241 CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 301 AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG 361 CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA 421 GAAGA Predicted gene structure (within gDNA segment 42328 to 45987): Exon 1 43478 43781 ( 304 n); cDNA 1 304 ( 304 n); score: 0.862 MATCH C08HBa0235H18.1+ SGN-E276456- 0.862 304 0.715 C PGS_C08HBa0235H18.1+_SGN-E276456- (43478 43781) Alignment (genomic DNA sequence = upper lines): GTGCATTGAA TTGAGTGGCA TTTTCCTCCA CTGGAATTGG TTGTGGCGAA AGTCATCGGT 43537 ||||| |||| ||| ||| || |||||||||| || | || | ||| ||| || |||||| || GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 60 ATATTAAATC CATCGACTAA AGAAATGTCC CAGAAATCTA GGTTGTTAAA CTGGTTCAAG 43597 |||||||||| |||||||||| |||||||||| || ||||||| |||| |||| ||||| |||| ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 120 GCGTATTCGG TCAAGGTGTT TGGCGGTTTA CCCCACCCGG TACACTGCAA GACTCCACCA 43657 ||||| |||| | |||||| ||| ||||| ||||| |||| ||||||| || |||||||||| GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 180 CAATCACCAG TCTCACAAGA ACCTCTACCA GCACCGTCAA AGTTGCATTT AGTACGACCC 43717 |||||||||| ||| ||| | |||||| || ||| | | || ||||||| |||||||||| CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 240 CATATACGTG CCATCTTAGT GCCCCTCAGT GCATTGATGG TCCAAGTCTG GCCTTGATTG 43777 |||||||||| |||||||||| |||||| | ||||||||| ||| || || |||| ||||| CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 300 AGAC 43781 |||| AGAC 304 hqPGS_C08HBa0235H18.1+_SGN-E276456- (43478 43781) ******************************************************************************** EST sequence 1077 -strand 444 n (File: SGN-E208277-) 1 GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 61 ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 121 GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 181 CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 241 CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 301 AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG 361 CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA 421 GAAGATGTCA AGTAGCCCAT GTTT Predicted gene structure (within gDNA segment 42328 to 46177): Exon 1 43478 43781 ( 304 n); cDNA 1 304 ( 304 n); score: 0.862 MATCH C08HBa0235H18.1+ SGN-E208277- 0.862 304 0.685 C PGS_C08HBa0235H18.1+_SGN-E208277- (43478 43781) Alignment (genomic DNA sequence = upper lines): GTGCATTGAA TTGAGTGGCA TTTTCCTCCA CTGGAATTGG TTGTGGCGAA AGTCATCGGT 43537 ||||| |||| ||| ||| || |||||||||| || | || | ||| ||| || |||||| || GTGCAATGAA TTGCGTGACA TTTTCCTCCA CTAGGTTTTG TTGGGGCAAA AGTCATTGGA 60 ATATTAAATC CATCGACTAA AGAAATGTCC CAGAAATCTA GGTTGTTAAA CTGGTTCAAG 43597 |||||||||| |||||||||| |||||||||| || ||||||| |||| |||| ||||| |||| ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 120 GCGTATTCGG TCAAGGTGTT TGGCGGTTTA CCCCACCCGG TACACTGCAA GACTCCACCA 43657 ||||| |||| | |||||| ||| ||||| ||||| |||| ||||||| || |||||||||| GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 180 CAATCACCAG TCTCACAAGA ACCTCTACCA GCACCGTCAA AGTTGCATTT AGTACGACCC 43717 |||||||||| ||| ||| | |||||| || ||| | | || ||||||| |||||||||| CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 240 CATATACGTG CCATCTTAGT GCCCCTCAGT GCATTGATGG TCCAAGTCTG GCCTTGATTG 43777 |||||||||| |||||||||| |||||| | ||||||||| ||| || || |||| ||||| CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 300 AGAC 43781 |||| AGAC 304 hqPGS_C08HBa0235H18.1+_SGN-E208277- (43478 43781) ******************************************************************************** EST sequence 640 -strand 419 n (File: SGN-E338892-) 1 TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 61 TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 121 CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 181 AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 241 ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 301 GACGTCGACC ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC 361 GTACCTCAAT AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAA Predicted gene structure (within gDNA segment 42338 to 45937): Exon 1 43479 43781 ( 303 n); cDNA 1 303 ( 303 n); score: 0.861 MATCH C08HBa0235H18.1+ SGN-E338892- 0.861 303 0.723 C PGS_C08HBa0235H18.1+_SGN-E338892- (43479 43781) Alignment (genomic DNA sequence = upper lines): TGCATTGAAT TGAGTGGCAT TTTCCTCCAC TGGAATTGGT TGTGGCGAAA GTCATCGGTA 43538 |||| ||||| || ||| ||| |||||||||| | | || || || ||| ||| ||||| || | TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 60 TATTAAATCC ATCGACTAAA GAAATGTCCC AGAAATCTAG GTTGTTAAAC TGGTTCAAGG 43598 |||||||||| |||||||||| |||||||||| | ||||||| |||| ||||| |||| ||||| TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 120 CGTATTCGGT CAAGGTGTTT GGCGGTTTAC CCCACCCGGT ACACTGCAAG ACTCCACCAC 43658 |||| |||| | ||||||| || ||||| | |||| ||||| |||||| ||| |||||||||| CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 180 AATCACCAGT CTCACAAGAA CCTCTACCAG CACCGTCAAA GTTGCATTTA GTACGACCCC 43718 |||||||||| || ||| | | ||||| || | || | | ||| |||||| | |||||||||| AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 240 ATATACGTGC CATCTTAGTG CCCCTCAGTG CATTGATGGT CCAAGTCTGG CCTTGATTGA 43778 |||||||||| ||||||||| |||||| | | |||||||| ||| || ||| ||| |||||| ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 300 GAC 43781 ||| GAC 303 hqPGS_C08HBa0235H18.1+_SGN-E338892- (43479 43781) ******************************************************************************** EST sequence 869 -strand 433 n (File: SGN-E200039-) 1 TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 61 TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 121 CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 181 AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 241 ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 301 GACGTCGACC ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC 361 GTACCTCAAT AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG 421 AAGATGTCAA GTA Predicted gene structure (within gDNA segment 42338 to 46077): Exon 1 43479 43781 ( 303 n); cDNA 1 303 ( 303 n); score: 0.861 MATCH C08HBa0235H18.1+ SGN-E200039- 0.861 303 0.700 C PGS_C08HBa0235H18.1+_SGN-E200039- (43479 43781) Alignment (genomic DNA sequence = upper lines): TGCATTGAAT TGAGTGGCAT TTTCCTCCAC TGGAATTGGT TGTGGCGAAA GTCATCGGTA 43538 |||| ||||| || ||| ||| |||||||||| | | || || || ||| ||| ||||| || | TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 60 TATTAAATCC ATCGACTAAA GAAATGTCCC AGAAATCTAG GTTGTTAAAC TGGTTCAAGG 43598 |||||||||| |||||||||| |||||||||| | ||||||| |||| ||||| |||| ||||| TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 120 CGTATTCGGT CAAGGTGTTT GGCGGTTTAC CCCACCCGGT ACACTGCAAG ACTCCACCAC 43658 |||| |||| | ||||||| || ||||| | |||| ||||| |||||| ||| |||||||||| CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 180 AATCACCAGT CTCACAAGAA CCTCTACCAG CACCGTCAAA GTTGCATTTA GTACGACCCC 43718 |||||||||| || ||| | | ||||| || | || | | ||| |||||| | |||||||||| AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 240 ATATACGTGC CATCTTAGTG CCCCTCAGTG CATTGATGGT CCAAGTCTGG CCTTGATTGA 43778 |||||||||| ||||||||| |||||| | | |||||||| ||| || ||| ||| |||||| ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 300 GAC 43781 ||| GAC 303 hqPGS_C08HBa0235H18.1+_SGN-E200039- (43479 43781) ******************************************************************************** EST sequence 1056 -strand 429 n (File: SGN-E210426-) 1 TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 61 TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 121 CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 181 AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 241 ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 301 GACGTCGACC ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC 361 GTACCTCAAT AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG 421 AAGATGTCA Predicted gene structure (within gDNA segment 42338 to 46037): Exon 1 43479 43781 ( 303 n); cDNA 1 303 ( 303 n); score: 0.861 MATCH C08HBa0235H18.1+ SGN-E210426- 0.861 303 0.706 C PGS_C08HBa0235H18.1+_SGN-E210426- (43479 43781) Alignment (genomic DNA sequence = upper lines): TGCATTGAAT TGAGTGGCAT TTTCCTCCAC TGGAATTGGT TGTGGCGAAA GTCATCGGTA 43538 |||| ||||| || ||| ||| |||||||||| | | || || || ||| ||| ||||| || | TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 60 TATTAAATCC ATCGACTAAA GAAATGTCCC AGAAATCTAG GTTGTTAAAC TGGTTCAAGG 43598 |||||||||| |||||||||| |||||||||| | ||||||| |||| ||||| |||| ||||| TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 120 CGTATTCGGT CAAGGTGTTT GGCGGTTTAC CCCACCCGGT ACACTGCAAG ACTCCACCAC 43658 |||| |||| | ||||||| || ||||| | |||| ||||| |||||| ||| |||||||||| CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 180 AATCACCAGT CTCACAAGAA CCTCTACCAG CACCGTCAAA GTTGCATTTA GTACGACCCC 43718 |||||||||| || ||| | | ||||| || | || | | ||| |||||| | |||||||||| AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 240 ATATACGTGC CATCTTAGTG CCCCTCAGTG CATTGATGGT CCAAGTCTGG CCTTGATTGA 43778 |||||||||| ||||||||| |||||| | | |||||||| ||| || ||| ||| |||||| ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 300 GAC 43781 ||| GAC 303 hqPGS_C08HBa0235H18.1+_SGN-E210426- (43479 43781) ******************************************************************************** EST sequence 1233 -strand 445 n (File: SGN-E200871-) 1 TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 61 TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 121 CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 181 AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 241 ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 301 GACGTCGACC ACCGCCTATC GGAGTCGATG CCGCCCAAAC GGTGTATGGA CAGTTGTTGC 361 GTACCTCAAT AGTGGCAGCA TAAGTATAAG TCACACAAAG AAGGAAGAAG AGAACAAAAG 421 AAGATGTCAA GTAGCCCATG TTTGT Predicted gene structure (within gDNA segment 42338 to 46197): Exon 1 43479 43781 ( 303 n); cDNA 1 303 ( 303 n); score: 0.861 MATCH C08HBa0235H18.1+ SGN-E200871- 0.861 303 0.681 C PGS_C08HBa0235H18.1+_SGN-E200871- (43479 43781) Alignment (genomic DNA sequence = upper lines): TGCATTGAAT TGAGTGGCAT TTTCCTCCAC TGGAATTGGT TGTGGCGAAA GTCATCGGTA 43538 |||| ||||| || ||| ||| |||||||||| | | || || || ||| ||| ||||| || | TGCAATGAAT TGCGTGACAT TTTCCTCCAC TAGGTTTTGT TGGGGCAAAA GTCATTGGAA 60 TATTAAATCC ATCGACTAAA GAAATGTCCC AGAAATCTAG GTTGTTAAAC TGGTTCAAGG 43598 |||||||||| |||||||||| |||||||||| | ||||||| |||| ||||| |||| ||||| TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC TGGTCCAAGG 120 CGTATTCGGT CAAGGTGTTT GGCGGTTTAC CCCACCCGGT ACACTGCAAG ACTCCACCAC 43658 |||| |||| | ||||||| || ||||| | |||| ||||| |||||| ||| |||||||||| CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG ACTCCACCAC 180 AATCACCAGT CTCACAAGAA CCTCTACCAG CACCGTCAAA GTTGCATTTA GTACGACCCC 43718 |||||||||| || ||| | | ||||| || | || | | ||| |||||| | |||||||||| AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA GTACGACCCC 240 ATATACGTGC CATCTTAGTG CCCCTCAGTG CATTGATGGT CCAAGTCTGG CCTTGATTGA 43778 |||||||||| ||||||||| |||||| | | |||||||| ||| || ||| ||| |||||| ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG CCTCGATTGA 300 GAC 43781 ||| GAC 303 hqPGS_C08HBa0235H18.1+_SGN-E200871- (43479 43781) ******************************************************************************** EST sequence 913 -strand 426 n (File: SGN-E256174-) 1 AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT 61 TAAATCCATC GACTAAAGAA ATGTCCCAAA AATATAAGTT GCTAAACTGG TCCAAGGCGT 121 ACTCGGCTAG GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT 181 CACCAGTCTG ACATGTACCT CTGCATGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA 241 TACGTGCCAT CTTAGTTCCC CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC 301 GTCGACCACC GCCTATCGGA GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA 361 CCTCAATAGT GGCAGCATAA GTATAAGTCA CACAAAGAAG GAAGAAGAGA ACAAAAGAAG 421 ATGTCA Predicted gene structure (within gDNA segment 42368 to 46037): Exon 1 43484 43781 ( 298 n); cDNA 3 300 ( 298 n); score: 0.856 MATCH C08HBa0235H18.1+ SGN-E256174- 0.856 298 0.700 C PGS_C08HBa0235H18.1+_SGN-E256174- (43484 43781) Alignment (genomic DNA sequence = upper lines): TGAATTGAGT GGCATTTTCC TCCACTGGAA TTGGTTGTGG CGAAAGTCAT CGGTATATTA 43543 ||||||| || | |||||||| |||||| | || |||| || | |||||||| || |||||| TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT TGGAATATTA 62 AATCCATCGA CTAAAGAAAT GTCCCAGAAA TCTAGGTTGT TAAACTGGTT CAAGGCGTAT 43603 |||||||||| |||||||||| |||||| ||| | || |||| ||||||||| ||||||||| AATCCATCGA CTAAAGAAAT GTCCCAAAAA TATAAGTTGC TAAACTGGTC CAAGGCGTAC 122 TCGGTCAAGG TGTTTGGCGG TTTACCCCAC CCGGTACACT GCAAGACTCC ACCACAATCA 43663 |||| | || ||||||| || ||| ||||| |||||||||| | |||||||| |||||||||| TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC ACCACAATCA 182 CCAGTCTCAC AAGAACCTCT ACCAGCACCG TCAAAGTTGC ATTTAGTACG ACCCCATATA 43723 ||||||| || | | |||||| | ||| | | |||||||| | |||||| |||||||||| CCAGTCTGAC ATGTACCTCT GCATGCAGCA TTAAAGTTGC AACCAGTACG ACCCCATATA 242 CGTGCCATCT TAGTGCCCCT CAGTGCATTG ATGGTCCAAG TCTGGCCTTG ATTGAGAC 43781 |||||||||| |||| ||||| | | |||||| ||| ||| | | |||||| | |||||||| CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG TTTGGCCTCG ATTGAGAC 300 hqPGS_C08HBa0235H18.1+_SGN-E256174- (43484 43781) ******************************************************************************** EST sequence 1169 -strand 410 n (File: SGN-E208827-) 1 AATGAATTGC GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT 61 TAAATCCATC GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT 121 ACTCGGCTAG GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT 181 CACCAGTCTG ACATGTACCT CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA 241 TACGTGCCAT CTTAGTTCCC CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC 301 GTCGACCACC GCCTATCGGA GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA 361 CCTCAATAGT GGCAGCATAA GTATAAGTCA CACAAAGAAG GAAGAAGAGA Predicted gene structure (within gDNA segment 42368 to 45877): Exon 1 43484 43781 ( 298 n); cDNA 3 300 ( 298 n); score: 0.862 MATCH C08HBa0235H18.1+ SGN-E208827- 0.862 298 0.727 C PGS_C08HBa0235H18.1+_SGN-E208827- (43484 43781) Alignment (genomic DNA sequence = upper lines): TGAATTGAGT GGCATTTTCC TCCACTGGAA TTGGTTGTGG CGAAAGTCAT CGGTATATTA 43543 ||||||| || | |||||||| |||||| | || |||| || | |||||||| || |||||| TGAATTGCGT GACATTTTCC TCCACTAGGT TTTGTTGGGG CAAAAGTCAT TGGAATATTA 62 AATCCATCGA CTAAAGAAAT GTCCCAGAAA TCTAGGTTGT TAAACTGGTT CAAGGCGTAT 43603 |||||||||| |||||||||| |||||| ||| |||| |||| ||||||||| ||||||||| AATCCATCGA CTAAAGAAAT GTCCCAAAAA TCTAAGTTGC TAAACTGGTC CAAGGCGTAC 122 TCGGTCAAGG TGTTTGGCGG TTTACCCCAC CCGGTACACT GCAAGACTCC ACCACAATCA 43663 |||| | || ||||||| || ||| ||||| |||||||||| | |||||||| |||||||||| TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT CCGGTACACT GTAAGACTCC ACCACAATCA 182 CCAGTCTCAC AAGAACCTCT ACCAGCACCG TCAAAGTTGC ATTTAGTACG ACCCCATATA 43723 ||||||| || | | |||||| || ||| | | |||||||| | |||||| |||||||||| CCAGTCTGAC ATGTACCTCT GCCTGCAGCA TTAAAGTTGC AACCAGTACG ACCCCATATA 242 CGTGCCATCT TAGTGCCCCT CAGTGCATTG ATGGTCCAAG TCTGGCCTTG ATTGAGAC 43781 |||||||||| |||| ||||| | | |||||| ||| ||| | | |||||| | |||||||| CGTGCCATCT TAGTTCCCCT CGGAGCATTG ATGACCCATG TTTGGCCTCG ATTGAGAC 300 hqPGS_C08HBa0235H18.1+_SGN-E208827- (43484 43781) ******************************************************************************** EST sequence 825 -strand 413 n (File: SGN-E336913-) 1 GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC 61 GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG 121 GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG 181 ACATGTACCT CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT 241 CTTAGTTCCC CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC GTCGACCACC 301 GCCTATCGGA GTCGATGCCG CCCAAACGGT GTATGGACAG TTGTTGCGTA CCTCAATAGT 361 GGCAGCATAA GTATAAGTCA CACAAAGAAG GAAGAAGAGA ACAAAAGAAG CCT Predicted gene structure (within gDNA segment 42468 to 46007): Exon 1 43492 43781 ( 290 n); cDNA 1 290 ( 290 n); score: 0.862 MATCH C08HBa0235H18.1+ SGN-E336913- 0.862 290 0.702 C PGS_C08HBa0235H18.1+_SGN-E336913- (43492 43781) Alignment (genomic DNA sequence = upper lines): GTGGCATTTT CCTCCACTGG AATTGGTTGT GGCGAAAGTC ATCGGTATAT TAAATCCATC 43551 ||| |||||| |||||||| | || |||| ||| |||||| || || |||| |||||||||| GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC 60 GACTAAAGAA ATGTCCCAGA AATCTAGGTT GTTAAACTGG TTCAAGGCGT ATTCGGTCAA 43611 |||||||||| |||||||| | |||||| ||| | |||||||| | |||||||| | |||| | GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG 120 GGTGTTTGGC GGTTTACCCC ACCCGGTACA CTGCAAGACT CCACCACAAT CACCAGTCTC 43671 ||||||||| ||||| |||| | |||||||| ||| |||||| |||||||||| ||||||||| GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG 180 ACAAGAACCT CTACCAGCAC CGTCAAAGTT GCATTTAGTA CGACCCCATA TACGTGCCAT 43731 ||| | |||| || || ||| | | |||||| ||| |||| |||||||||| |||||||||| ACATGTACCT CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT 240 CTTAGTGCCC CTCAGTGCAT TGATGGTCCA AGTCTGGCCT TGATTGAGAC 43781 |||||| ||| ||| | |||| ||||| ||| || |||||| ||||||||| CTTAGTTCCC CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC 290 hqPGS_C08HBa0235H18.1+_SGN-E336913- (43492 43781) ******************************************************************************** EST sequence 991 -strand 431 n (File: SGN-E207769-) 1 CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT 61 CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA 121 GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTGT 181 GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA 241 TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC 301 CGCCTATCGG AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG 361 TGGCAGCATA AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAAGT 421 AGCCCATGTT T Predicted gene structure (within gDNA segment 42458 to 46177): Exon 1 43492 43781 ( 290 n); cDNA 2 291 ( 290 n); score: 0.859 MATCH C08HBa0235H18.1+ SGN-E207769- 0.859 290 0.673 C PGS_C08HBa0235H18.1+_SGN-E207769- (43492 43781) Alignment (genomic DNA sequence = upper lines): GTGGCATTTT CCTCCACTGG AATTGGTTGT GGCGAAAGTC ATCGGTATAT TAAATCCATC 43551 ||| |||||| |||||||| | || |||| ||| |||||| || || |||| |||||||||| GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC 61 GACTAAAGAA ATGTCCCAGA AATCTAGGTT GTTAAACTGG TTCAAGGCGT ATTCGGTCAA 43611 |||||||||| |||||||| | |||||| ||| | |||||||| | |||||||| | |||| | GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG 121 GGTGTTTGGC GGTTTACCCC ACCCGGTACA CTGCAAGACT CCACCACAAT CACCAGTCTC 43671 ||||||||| ||||| |||| | |||||||| ||| |||||| |||||||||| ||||||| | GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTGTG 181 ACAAGAACCT CTACCAGCAC CGTCAAAGTT GCATTTAGTA CGACCCCATA TACGTGCCAT 43731 ||| | |||| || || ||| | | |||||| ||| |||| |||||||||| |||||||||| ACATGTACCT CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT 241 CTTAGTGCCC CTCAGTGCAT TGATGGTCCA AGTCTGGCCT TGATTGAGAC 43781 |||||| ||| ||| | |||| ||||| ||| || |||||| ||||||||| CTTAGTTCCC CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC 291 hqPGS_C08HBa0235H18.1+_SGN-E207769- (43492 43781) ******************************************************************************** EST sequence 1152 -strand 418 n (File: SGN-E201442-) 1 CGTGACATTT TCCTCCACTA GGTTTTGTTG GGGCAAAAGT CATTGGAATA TTAAATCCAT 61 CGACTAAAGA AATGTCCCAA AAATCTAAGT TGCTAAACTG GTCCAAGGCG TACTCGGCTA 121 GGGTGTTTGG GGGTTTGCCC CATCCGGTAC ACTGTAAGAC TCCACCACAA TCACCAGTCT 181 GACATGTACC TCTGCCTGCA GCATTAAAGT TGCAACCAGT ACGACCCCAT ATACGTGCCA 241 TCTTAGTTCC CCTCGGAGCA TTGATGACCC ATGTTTGGCC TCGATTGAGA CGTCGACCAC 301 CGCCTATCGG AGTCGATGCC GCCCAAACGG TGTATGGACA GTTGTTGCGT ACCTCAATAG 361 TGGCAGCATA AGTATAAGTC ACACAAAGAA GGAAGAAGAG AACAAAAGAA GATGTCAA Predicted gene structure (within gDNA segment 42458 to 46047): Exon 1 43492 43781 ( 290 n); cDNA 2 291 ( 290 n); score: 0.862 MATCH C08HBa0235H18.1+ SGN-E201442- 0.862 290 0.694 C PGS_C08HBa0235H18.1+_SGN-E201442- (43492 43781) Alignment (genomic DNA sequence = upper lines): GTGGCATTTT CCTCCACTGG AATTGGTTGT GGCGAAAGTC ATCGGTATAT TAAATCCATC 43551 ||| |||||| |||||||| | || |||| ||| |||||| || || |||| |||||||||| GTGACATTTT CCTCCACTAG GTTTTGTTGG GGCAAAAGTC ATTGGAATAT TAAATCCATC 61 GACTAAAGAA ATGTCCCAGA AATCTAGGTT GTTAAACTGG TTCAAGGCGT ATTCGGTCAA 43611 |||||||||| |||||||| | |||||| ||| | |||||||| | |||||||| | |||| | GACTAAAGAA ATGTCCCAAA AATCTAAGTT GCTAAACTGG TCCAAGGCGT ACTCGGCTAG 121 GGTGTTTGGC GGTTTACCCC ACCCGGTACA CTGCAAGACT CCACCACAAT CACCAGTCTC 43671 ||||||||| ||||| |||| | |||||||| ||| |||||| |||||||||| ||||||||| GGTGTTTGGG GGTTTGCCCC ATCCGGTACA CTGTAAGACT CCACCACAAT CACCAGTCTG 181 ACAAGAACCT CTACCAGCAC CGTCAAAGTT GCATTTAGTA CGACCCCATA TACGTGCCAT 43731 ||| | |||| || || ||| | | |||||| ||| |||| |||||||||| |||||||||| ACATGTACCT CTGCCTGCAG CATTAAAGTT GCAACCAGTA CGACCCCATA TACGTGCCAT 241 CTTAGTGCCC CTCAGTGCAT TGATGGTCCA AGTCTGGCCT TGATTGAGAC 43781 |||||| ||| ||| | |||| ||||| ||| || |||||| ||||||||| CTTAGTTCCC CTCGGAGCAT TGATGACCCA TGTTTGGCCT CGATTGAGAC 291 hqPGS_C08HBa0235H18.1+_SGN-E201442- (43492 43781) ******************************************************************************** EST sequence 712 -strand 395 n (File: SGN-E204939-) 1 TTTGTTGGGG CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA 61 TCTAAGTTGC TAAACTGGTC CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT 121 CCGGTACACT GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA 181 TTAAAGTTGC AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG 241 ATGACCCATG TTTGGCCTCG ATTGAGACGT CGACCACCGC CTATCGGAGT CGATGCCGCC 301 CAAACGGTGT ATGGACAGTT GTTGCGTACC TCAATAGTGG CAGCATAAGT ATAAGTCACA 361 CAAAGAAGGA AGAAGAGAAC AAAAGAAGAT GTCAA Predicted gene structure (within gDNA segment 42688 to 46047): Exon 1 43514 43781 ( 268 n); cDNA 1 268 ( 268 n); score: 0.866 MATCH C08HBa0235H18.1+ SGN-E204939- 0.866 268 0.678 C PGS_C08HBa0235H18.1+_SGN-E204939- (43514 43781) Alignment (genomic DNA sequence = upper lines): TTGGTTGTGG CGAAAGTCAT CGGTATATTA AATCCATCGA CTAAAGAAAT GTCCCAGAAA 43573 || |||| || | |||||||| || |||||| |||||||||| |||||||||| |||||| ||| TTTGTTGGGG CAAAAGTCAT TGGAATATTA AATCCATCGA CTAAAGAAAT GTCCCAAAAA 60 TCTAGGTTGT TAAACTGGTT CAAGGCGTAT TCGGTCAAGG TGTTTGGCGG TTTACCCCAC 43633 |||| |||| ||||||||| ||||||||| |||| | || ||||||| || ||| ||||| TCTAAGTTGC TAAACTGGTC CAAGGCGTAC TCGGCTAGGG TGTTTGGGGG TTTGCCCCAT 120 CCGGTACACT GCAAGACTCC ACCACAATCA CCAGTCTCAC AAGAACCTCT ACCAGCACCG 43693 |||||||||| | |||||||| |||||||||| ||||||| || | | |||||| || ||| | CCGGTACACT GTAAGACTCC ACCACAATCA CCAGTCTGAC ATGTACCTCT GCCTGCAGCA 180 TCAAAGTTGC ATTTAGTACG ACCCCATATA CGTGCCATCT TAGTGCCCCT CAGTGCATTG 43753 | |||||||| | |||||| |||||||||| |||||||||| |||| ||||| | | |||||| TTAAAGTTGC AACCAGTACG ACCCCATATA CGTGCCATCT TAGTTCCCCT CGGAGCATTG 240 ATGGTCCAAG TCTGGCCTTG ATTGAGAC 43781 ||| ||| | | |||||| | |||||||| ATGACCCATG TTTGGCCTCG ATTGAGAC 268 hqPGS_C08HBa0235H18.1+_SGN-E204939- (43514 43781) ******************************************************************************** EST sequence 1140 -strand 390 n (File: SGN-E210135-) 1 TTGTTGGGGC AAAAGTCATT GGAATATTAA ATCCATCGAC TAAAGAAATG TCCCAAAAAT 61 ATAAGTTGCT AAGCTGGTCC AAGGCGTACT CGGTTAGGGT GTTTGGGGGT TTGCCCCATC 121 CGGTACACTG TAAGACTCCA CCACAATCAC CAGTCTGACA TGTACCTCTG CCTGCAGCAT 181 TAAAGTTGCA ACCAGTACGA CCCCATATAC GTGCCATCTT AGTTCCCCTC GGAGCATTGA 241 TGACCCATGT TTGGCCTCGA TTGAGACGTC GACCACCGCC TATCGGAGTC GATGCCGCCC 301 AAACGGTGTA TGGACAGTTG TTGCGTACCT CAATAGTGGC AGCATAAGTA TAAGTCACAC 361 AAAGAAGGAA GAAGAGAACA AAAGAAGATG Predicted gene structure (within gDNA segment 42698 to 46007): Exon 1 43517 43781 ( 265 n); cDNA 3 267 ( 265 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E210135- 0.864 265 0.679 C PGS_C08HBa0235H18.1+_SGN-E210135- (43517 43781) Alignment (genomic DNA sequence = upper lines): GTTGTGGCGA AAGTCATCGG TATATTAAAT CCATCGACTA AAGAAATGTC CCAGAAATCT 43576 |||| ||| | ||||||| || ||||||||| |||||||||| |||||||||| ||| |||| | GTTGGGGCAA AAGTCATTGG AATATTAAAT CCATCGACTA AAGAAATGTC CCAAAAATAT 62 AGGTTGTTAA ACTGGTTCAA GGCGTATTCG GTCAAGGTGT TTGGCGGTTT ACCCCACCCG 43636 | |||| ||| ||||| ||| |||||| ||| || | ||||| |||| ||||| ||||| ||| AAGTTGCTAA GCTGGTCCAA GGCGTACTCG GTTAGGGTGT TTGGGGGTTT GCCCCATCCG 122 GTACACTGCA AGACTCCACC ACAATCACCA GTCTCACAAG AACCTCTACC AGCACCGTCA 43696 |||||||| | |||||||||| |||||||||| |||| ||| | |||||| || ||| | | | GTACACTGTA AGACTCCACC ACAATCACCA GTCTGACATG TACCTCTGCC TGCAGCATTA 182 AAGTTGCATT TAGTACGACC CCATATACGT GCCATCTTAG TGCCCCTCAG TGCATTGATG 43756 |||||||| ||||||||| |||||||||| |||||||||| | |||||| | ||||||||| AAGTTGCAAC CAGTACGACC CCATATACGT GCCATCTTAG TTCCCCTCGG AGCATTGATG 242 GTCCAAGTCT GGCCTTGATT GAGAC 43781 ||| || | ||||| |||| ||||| ACCCATGTTT GGCCTCGATT GAGAC 267 hqPGS_C08HBa0235H18.1+_SGN-E210135- (43517 43781) ******************************************************************************** EST sequence 744 -strand 349 n (File: SGN-E278209-) 1 CGGGGCGAAA GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC AGAAATCTAG 61 GTTGCTAAAC TGGTCCAAGG CGTACTCGGC CAGGGTGTTT GGTGGTTTGC CCCACCCGGT 121 ACATTGCAAG ACCCCCCCCA CAATCACCAG TCTGACATGA ACCTCTACCA GCACCATCAA 181 AGTTGCAATT CGTACGACCC CATATACGTG CCATCTTAGT GCCCCTCGGT GCATTGATGA 241 CCCATGTTTG GCCTCGATCA AGACGTCGAC CACCGCCTAT TGGGGTCGAC GCCGCCCAGA 301 CGGTGTATGG ACAGTTGTTG CGTACCTCGA AAGTGGCAGC ATAAGTGTA Predicted gene structure (within gDNA segment 42738 to 45564): Exon 1 43522 43781 ( 260 n); cDNA 4 264 ( 261 n); score: 0.894 MATCH C08HBa0235H18.1+ SGN-E278209- 0.894 260 0.745 C PGS_C08HBa0235H18.1+_SGN-E278209- (43522 43781) Alignment (genomic DNA sequence = upper lines): GGCGAAAGTC ATCGGTATAT TAAATCCATC GACTAAAGAA ATGTCCCAGA AATCTAGGTT 43581 |||||||||| || || |||| |||||||||| |||||||||| |||||||||| |||||||||| GGCGAAAGTC ATTGGAATAT TAAATCCATC GACTAAAGAA ATGTCCCAGA AATCTAGGTT 63 GTTAAACTGG TTCAAGGCGT ATTCGGTCAA GGTGTTTGGC GGTTTACCCC ACCCGGTACA 43641 | |||||||| | |||||||| | |||| || ||||||||| ||||| |||| |||||||||| GCTAAACTGG TCCAAGGCGT ACTCGGCCAG GGTGTTTGGT GGTTTGCCCC ACCCGGTACA 123 CTGCAAGA-C TCCACCACAA TCACCAGTCT CACAAGAACC TCTACCAGCA CCGTCAAAGT 43700 ||||||| | || |||||| |||||||||| ||| ||||| |||||||||| || ||||||| TTGCAAGACC CCCCCCACAA TCACCAGTCT GACATGAACC TCTACCAGCA CCATCAAAGT 183 TGCATTTAGT ACGACCCCAT ATACGTGCCA TCTTAGTGCC CCTCAGTGCA TTGATGGTCC 43760 |||| || || |||||||||| |||||||||| |||||||||| |||| ||||| |||||| || TGCAATTCGT ACGACCCCAT ATACGTGCCA TCTTAGTGCC CCTCGGTGCA TTGATGACCC 243 AAGTCTGGCC TTGATTGAGA C 43781 | || ||||| | ||| ||| | ATGTTTGGCC TCGATCAAGA C 264 hqPGS_C08HBa0235H18.1+_SGN-E278209- (43522 43781) ******************************************************************************** EST sequence 1060 -strand 265 n (File: SGN-E210564-) 1 GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC 61 TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG 121 ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA 181 GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG 241 CCTCGATTGA GACGTCGACC ACCGC Predicted gene structure (within gDNA segment 42838 to 44897): Exon 1 43529 43786 ( 258 n); cDNA 1 258 ( 258 n); score: 0.868 MATCH C08HBa0235H18.1+ SGN-E210564- 0.868 258 0.974 C PGS_C08HBa0235H18.1+_SGN-E210564- (43529 43786) Alignment (genomic DNA sequence = upper lines): GTCATCGGTA TATTAAATCC ATCGACTAAA GAAATGTCCC AGAAATCTAG GTTGTTAAAC 43588 ||||| || | |||||||||| |||||||||| |||||||||| | ||||||| |||| ||||| GTCATTGGAA TATTAAATCC ATCGACTAAA GAAATGTCCC AAAAATCTAA GTTGCTAAAC 60 TGGTTCAAGG CGTATTCGGT CAAGGTGTTT GGCGGTTTAC CCCACCCGGT ACACTGCAAG 43648 |||| ||||| |||| |||| | ||||||| || ||||| | |||| ||||| |||||| ||| TGGTCCAAGG CGTACTCGGC TAGGGTGTTT GGGGGTTTGC CCCATCCGGT ACACTGTAAG 120 ACTCCACCAC AATCACCAGT CTCACAAGAA CCTCTACCAG CACCGTCAAA GTTGCATTTA 43708 |||||||||| |||||||||| || ||| | | ||||| || | || | | ||| |||||| | ACTCCACCAC AATCACCAGT CTGACATGTA CCTCTGCCTG CAGCATTAAA GTTGCAACCA 180 GTACGACCCC ATATACGTGC CATCTTAGTG CCCCTCAGTG CATTGATGGT CCAAGTCTGG 43768 |||||||||| |||||||||| ||||||||| |||||| | | |||||||| ||| || ||| GTACGACCCC ATATACGTGC CATCTTAGTT CCCCTCGGAG CATTGATGAC CCATGTTTGG 240 CCTTGATTGA GACGTTGA 43786 ||| |||||| ||||| || CCTCGATTGA GACGTCGA 258 hqPGS_C08HBa0235H18.1+_SGN-E210564- (43529 43786) ******************************************************************************** EST sequence 614 -strand 379 n (File: SGN-E337746-) 1 ATATTAAATC CATCGACTAA AGAAATGTCC CAGAAATCTA GGTTGCTAAA CTGGTCCAAG 61 GCGTACTCGG CAAGGGTGTT TGGTGGTTTG CCCCACCCGG TACATTGCAA GACCCCACCA 121 CAATCACCAG TATGACATGA ACCTCTACCA GCACCATCAA AGTTGCAATT CGTACGACCC 181 CATATACGTG CCATCTTAGT GCCCCTCGGT GCATTGATGA CCCATGTTTG GCCTCGATCA 241 AGACGTCGAC CACCGCCTAT TGGGGTCGAC GCCGCCCAGA CGGTGTATGG ACAGTTGTTG 301 CGTACCTCGA AAGTGGCAGC ATAAGTGTAA GTCACAAAAG CAAGAAGGAA GAAAACAAAA 361 GAAGATCTCA AGTAGGCCA Predicted gene structure (within gDNA segment 42928 to 46064): Exon 1 43538 43781 ( 244 n); cDNA 1 244 ( 244 n); score: 0.902 MATCH C08HBa0235H18.1+ SGN-E337746- 0.902 244 0.644 C PGS_C08HBa0235H18.1+_SGN-E337746- (43538 43781) Alignment (genomic DNA sequence = upper lines): ATATTAAATC CATCGACTAA AGAAATGTCC CAGAAATCTA GGTTGTTAAA CTGGTTCAAG 43597 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| ||||| |||| ATATTAAATC CATCGACTAA AGAAATGTCC CAGAAATCTA GGTTGCTAAA CTGGTCCAAG 60 GCGTATTCGG TCAAGGTGTT TGGCGGTTTA CCCCACCCGG TACACTGCAA GACTCCACCA 43657 ||||| |||| | |||||| ||| ||||| |||||||||| |||| ||||| ||| |||||| GCGTACTCGG CAAGGGTGTT TGGTGGTTTG CCCCACCCGG TACATTGCAA GACCCCACCA 120 CAATCACCAG TCTCACAAGA ACCTCTACCA GCACCGTCAA AGTTGCATTT AGTACGACCC 43717 |||||||||| | | ||| || |||||||||| ||||| |||| ||||||| || ||||||||| CAATCACCAG TATGACATGA ACCTCTACCA GCACCATCAA AGTTGCAATT CGTACGACCC 180 CATATACGTG CCATCTTAGT GCCCCTCAGT GCATTGATGG TCCAAGTCTG GCCTTGATTG 43777 |||||||||| |||||||||| ||||||| || ||||||||| ||| || || |||| ||| CATATACGTG CCATCTTAGT GCCCCTCGGT GCATTGATGA CCCATGTTTG GCCTCGATCA 240 AGAC 43781 |||| AGAC 244 hqPGS_C08HBa0235H18.1+_SGN-E337746- (43538 43781) ******************************************************************************** EST sequence 648 -strand 386 n (File: SGN-E338707-) 1 ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 61 GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 121 CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 181 CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 241 AGACGTCGAC CACCGCCTAT CGGAGTCGAT GCCGCCCAAA CGGTGTATGG ACAGTTGTTG 301 CGTACCTCAA TAGTGGCAGC ATAAGTATAA GTCACACAAA GAAGGAAGAA GAGAACAAAA 361 GAAGATGTCA AGTAGCCCTC GTGCCG Predicted gene structure (within gDNA segment 42928 to 46197): Exon 1 43538 43781 ( 244 n); cDNA 1 244 ( 244 n); score: 0.873 MATCH C08HBa0235H18.1+ SGN-E338707- 0.873 244 0.632 C PGS_C08HBa0235H18.1+_SGN-E338707- (43538 43781) Alignment (genomic DNA sequence = upper lines): ATATTAAATC CATCGACTAA AGAAATGTCC CAGAAATCTA GGTTGTTAAA CTGGTTCAAG 43597 |||||||||| |||||||||| |||||||||| || ||||||| |||| |||| ||||| |||| ATATTAAATC CATCGACTAA AGAAATGTCC CAAAAATCTA AGTTGCTAAA CTGGTCCAAG 60 GCGTATTCGG TCAAGGTGTT TGGCGGTTTA CCCCACCCGG TACACTGCAA GACTCCACCA 43657 ||||| |||| | |||||| ||| ||||| ||||| |||| ||||||| || |||||||||| GCGTACTCGG CTAGGGTGTT TGGGGGTTTG CCCCATCCGG TACACTGTAA GACTCCACCA 120 CAATCACCAG TCTCACAAGA ACCTCTACCA GCACCGTCAA AGTTGCATTT AGTACGACCC 43717 |||||||||| ||| ||| | |||||| || ||| | | || ||||||| |||||||||| CAATCACCAG TCTGACATGT ACCTCTGCCT GCAGCATTAA AGTTGCAACC AGTACGACCC 180 CATATACGTG CCATCTTAGT GCCCCTCAGT GCATTGATGG TCCAAGTCTG GCCTTGATTG 43777 |||||||||| |||||||||| |||||| | ||||||||| ||| || || |||| ||||| CATATACGTG CCATCTTAGT TCCCCTCGGA GCATTGATGA CCCATGTTTG GCCTCGATTG 240 AGAC 43781 |||| AGAC 244 hqPGS_C08HBa0235H18.1+_SGN-E338707- (43538 43781) ******************************************************************************** EST sequence 814 -strand 358 n (File: SGN-E336810-) 1 ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC 61 GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA 121 ATCACCAGTC TGACATGTAC CTCTGCTTGC AGCATTAAAG TTGCAACCAG TACGACCCCA 181 TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG 241 ACGTCGACCA CCGCCTATCG GAGTCGATGC CGCCCAAACG GTGTATGGAC AGTTGTTGCG 301 TACCTCAATA GTGGCAGCAT AAGTATAAGT CACCCAAAGA AGGAAGAAGA GAACAAAA Predicted gene structure (within gDNA segment 42930 to 45937): Exon 1 43540 43781 ( 242 n); cDNA 1 242 ( 242 n); score: 0.868 MATCH C08HBa0235H18.1+ SGN-E336810- 0.868 242 0.676 C PGS_C08HBa0235H18.1+_SGN-E336810- (43540 43781) Alignment (genomic DNA sequence = upper lines): ATTAAATCCA TCGACTAAAG AAATGTCCCA GAAATCTAGG TTGTTAAACT GGTTCAAGGC 43599 |||||||||| |||||||||| |||||||||| ||||||| | ||| |||||| ||| |||||| ATTAAATCCA TCGACTAAAG AAATGTCCCA AAAATCTAAG TTGCTAAACT GGTCCAAGGC 60 GTATTCGGTC AAGGTGTTTG GCGGTTTACC CCACCCGGTA CACTGCAAGA CTCCACCACA 43659 ||| |||| | |||||||| | ||||| || ||| |||||| ||||| |||| |||||||||| GTACTCGGCT AGGGTGTTTG GGGGTTTGCC CCATCCGGTA CACTGTAAGA CTCCACCACA 120 ATCACCAGTC TCACAAGAAC CTCTACCAGC ACCGTCAAAG TTGCATTTAG TACGACCCCA 43719 |||||||||| | ||| | || |||| | || | | | |||| ||||| || |||||||||| ATCACCAGTC TGACATGTAC CTCTGCTTGC AGCATTAAAG TTGCAACCAG TACGACCCCA 180 TATACGTGCC ATCTTAGTGC CCCTCAGTGC ATTGATGGTC CAAGTCTGGC CTTGATTGAG 43779 |||||||||| |||||||| | ||||| | || ||||||| | || || |||| || ||||||| TATACGTGCC ATCTTAGTTC CCCTCGGAGC ATTGATGACC CATGTTTGGC CTCGATTGAG 240 AC 43781 || AC 242 hqPGS_C08HBa0235H18.1+_SGN-E336810- (43540 43781) ******************************************************************************** EST sequence 1052 -strand 455 n (File: SGN-E238621-) 1 GAGTTTGTTT TTAGACTTTT AGGAGTCGCC ACTTAATTTT TAAGAAAAAT CAAGAAAACT 61 TCGTTTCTAA ACAACTTAAA CAGAAAAATT GTTTTGAAAC ATTTTAAGGG TTCAAGATTC 121 CTATTAGTAT CTTAAGAAGG TGTAAGGCAC CTAAGACACT CCGTTAAATA CAGTTTTCCG 181 ACGATTAACT TATTTGACTA TTTTGTTTTA AAGACTTGCG AATTTTGAAC TTCTTAAGAT 241 ATCTAGGAAA ACTTTATAAA TTTGAAACAT TTATTGTTTT AAGATTCCGT TAACATTAAA 301 ACTTTTCGAA CTTTAATTCT AAGTGACTTT CAAATTCGAA CGCCTTTAAA GTTTCGATTT 361 TTTAGTTTCG AGTTTGATAA AGCAAAAGGC GTTTGATGGG GTTTGGATTC TTCTAATCCT 421 AAGCTAACGA CATTTAAAAC AAAAACGTCA ACAAA Predicted gene structure (within gDNA segment 42534 to 47726): Exon 1 44024 44425 ( 402 n); cDNA 89 455 ( 367 n); score: 0.728 MATCH C08HBa0235H18.1+ SGN-E238621- 0.728 402 0.884 C PGS_C08HBa0235H18.1+_SGN-E238621- (44024 44425) Alignment (genomic DNA sequence = upper lines): TTGTTTTGAA ACATTTTAAG GGTTCGGGAT TCCTATTAGT ATCTTAGGAA GGTGTAAGGC 44083 |||||||||| |||||||||| ||||| ||| |||||||||| |||||| ||| |||||||||| TTGTTTTGAA ACATTTTAAG GGTTCAAGAT TCCTATTAGT ATCTTAAGAA GGTGTAAGGC 148 ACCCAAAACA CTCCGTTAAC TTACGGTTTT CCAATGATTA AC-TATTTGA TTATTTTTAT 44142 ||| || ||| ||||||||| ||| ||||| || | ||||| || ||||||| || |||| | ACCTAAGACA CTCCGTTAA- ATACAGTTTT CCGACGATTA ACTTATTTGA CTA-TTTTGT 206 TTTTAACCTT TGCAAATTTA TTTGAACTTT TAACATGACT TACTTAGCCA AACTTAGCCA 44202 ||| || | ||| || | ||||||||| | | | || || ||| | ||||| | TTTAAAGACT TGCGAA--T- TTTGAACTTC TTA-A-GA-- TATCTAGGAA AACTT-TATA 258 ATTTTGAAAT ATTTATTGTT TATCTTGCCA GTTTACGAAA CCATTTCAAA GTTAAGCTTA 44262 | ||||||| |||||||| | | || | | || || | || || || || ||| AATTTGAAAC ATTTATTG-- T-T-TT--AA GATTCCGTTA ACA-TT--AA ---AA-CTT- 304 CTCAAGGTTT TATCTAAACA AGCCTTACGA ATTTGAAACA ATTTATCATT TAGAAGTTAG 44322 || | ||| || | | | ||| | | ||| ||| |||| || | | | || TTCGAACTTT AAT-TCTAAG TGACTTTCAA ATTCGAACGC CTTTAAAGTT TCG-A-TT-- 359 TTTTAAAAAT TTTTAGGTTT GATAAAATAA CAGGCGTTCG ATGAGGGTTT GGAGTTTCCT 44382 |||| | | || | |||| |||||| || ||||||| | ||| |||||| ||| | | || TTTT---AGT TTCGA-GTTT GATAAAGCAA AAGGCGTTTG ATG-GGGTTT GGATTCTTCT 414 AATCCTAAGC TTACGGCATT GAAAACAAAA TAAGATAAGC AAA 44425 |||||||||| | ||| |||| ||||||||| | | | | | ||| AATCCTAAGC TAACGACATT TAAAACAAAA -ACG-TCAAC AAA 455 hqPGS_C08HBa0235H18.1+_SGN-E238621- (44024 44425) ******************************************************************************** EST sequence 1016 -strand 358 n (File: SGN-E235901-) 1 GAAAACTCAT TCTCAAAACA ATTTAAACAG AAAAGTCGTT TTGAAAATAT TTTTTAGGAT 61 TCGGGATTCT TATTAGCGTC TTAGGAAGGT GTTTAAGGCA CCTAAGACAC TCCGTTAAAT 121 ACGGTTTTCC AACGACTAAC TTATTTGATT ATTTTTATTT TTACCCTTTG CAAATTTATT 181 TGAACTTTTA TCACGATTTA CTTAGCCAAA CTTTGCAAAT TTGAGATATT AATCTTTTAA 241 GATTCCGTCT TAGTTAAACT TTCTAAGCCT TAACTCTCTA AGCAGACTTT CAAATTTTAA 301 ACCTCTATCG TTTCAAAACT TCAATTTTTA TTTTTTAGTT TCATAAAGCA AAAGGCGT Predicted gene structure (within gDNA segment 42106 to 46247): Exon 1 44046 44264 ( 219 n); cDNA 60 279 ( 220 n); score: 0.781 MATCH C08HBa0235H18.1+ SGN-E235901- 0.781 219 0.612 C PGS_C08HBa0235H18.1+_SGN-E235901- (44046 44264) Alignment (genomic DNA sequence = upper lines): TTCGGGATTC CTATTAGTAT CTTAGGAAGG TG--TAAGGC ACCCAAAACA CTCCGTTAAC 44103 |||||||||| |||||| | |||||||||| || |||||| ||| || ||| ||||||||| TTCGGGATTC TTATTAGCGT CTTAGGAAGG TGTTTAAGGC ACCTAAGACA CTCCGTTAA- 118 TTACGGTTTT CCAATGATTA AC-TATTTGA TTATTTTTAT TTTTAACCTT TGCAAATTTA 44162 ||||||||| |||| || || || ||||||| |||||||||| ||||| |||| |||||||||| ATACGGTTTT CCAACGACTA ACTTATTTGA TTATTTTTAT TTTTACCCTT TGCAAATTTA 178 TTTGAACTTT TAACATGACT TACTTAGCCA AACTTAGCCA ATTTTGAAAT ATTTATTGTT 44222 |||||||||| || || || | |||||||||| ||||| | || | ||||| || ||| || || TTTGAACTTT TATCACGATT TACTTAGCCA AACTTTG-CA AATTTGAGAT ATTAATCTTT 237 TATCTTGCCA GTTTACGAAA CCATTTCAAA G-TTAAGCTT ACT 44264 || | || ||| || | |||| || | | | || || TAAGATTCCG TCTTAGTTAA AC-TTTCTAA GCCTTAACTC TCT 279 hqPGS_C08HBa0235H18.1+_SGN-E235901- (44046 44264) ******************************************************************************** EST sequence 8 +strand 645 n (File: SGN-E211803+) 1 AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 61 TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 121 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 181 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 241 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 301 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 361 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 421 AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 481 GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC 541 CCAAGGTCCA TGTGGCCCTA CAGAGTTGTC CAAATTTTTC AAGAAAAGAT GTCCCGATGC 601 TTATAGCTAC CCACNAGACG ATCCTACNAG CACATTTACT TGCCC Predicted gene structure (within gDNA segment 44483 to 50960): Exon 1 46874 47128 ( 255 n); cDNA 136 390 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E211803+ 0.863 255 0.395 C PGS_C08HBa0235H18.1+_SGN-E211803+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 195 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 255 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 315 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 375 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 390 hqPGS_C08HBa0235H18.1+_SGN-E211803+ (46874 47128) ******************************************************************************** EST sequence 10 +strand 583 n (File: SGN-E211899+) 1 TCTTCTTTTG TTCTCTTCTT CCTTCTTTGT GTGACTTATA CTTATGCTGC CACTATTGAG 61 GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA CTCCGATAGG CGGTGGTCGA 121 CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA GGGGAACTAA GATGGCACGT 181 ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA GAGGTACATG TCAGACTGGT 241 GATTGTGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC CCCCAAACAC CCTAGCCGAG 301 TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA TTTCTTTAGT CGATGGATTT 361 AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG GAAAATGTCA CGCAATTCAT 421 TGCACGGCCA ATATAAATGG TGAATGTCCT CGCGCCCTTA AGGTACCTGG AGGATGTAAC 481 AACCCTTGTA CCACGTTTGG AGGACNACAA TATTGTTGCA CCCAAAGTCC ATGTGGCCCT 541 ACAGAGTTGT CCAAATTTTT CAAGAAAAGA TGTCCCGATG CTT Predicted gene structure (within gDNA segment 44673 to 49930): Exon 1 46874 47128 ( 255 n); cDNA 117 371 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E211899+ 0.863 255 0.437 C PGS_C08HBa0235H18.1+_SGN-E211899+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 176 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 236 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 296 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 356 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 371 hqPGS_C08HBa0235H18.1+_SGN-E211899+ (46874 47128) ******************************************************************************** EST sequence 11 +strand 617 n (File: SGN-E211417+) 1 GTTCTCTTCT TCCTTCTTTG TGTGACTTAT ACTTATGCTG CCACTATTGA TTTACGCAAC 61 AACTGTCCAT ACACCGTTTG GGCGGCATCG ACTCCGATAG GCGGTGGTCG ACGTCTCAAT 121 CGAGGCCAAA CATGGGTCAT CAATGCTCCG AGGGGAACTA AGATGGCACG TATATGGGGT 181 CGTACTGGTT GCAACTTTAA TGCTGCAGGC AGAGGTACAT GTCAGACTGG TGATTGTGGT 241 GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAACA CCCTAGCCGA GTACGCCTTG 301 GACCAGTTTA GCAACTTAGA TTTTTGGGAC ATTTCTTTAG TCGATGGATT TAATATTCCA 361 ATGACTTTTG CCCCAACAAA ACCTAGTGGA GGAAAATGTC ACGCAATTCA TTGCACGGCC 421 AATATAAATG GTGAATGTCC TCGCGCCCTT AAGGTACCTG GAGGATGTAA CAACCCTTGT 481 ACCACGTTTG GAGGACAACA ATATTGTTGC ACCCAAGGAT CATGTGGCCC TACAGAGTTG 541 TCCAAATTTT TCAAGAATAG ATGTCCCGAT GCTTATAGCT ACCCACAAGA CGATCCCTAC 601 AGCACATTTA CTTGCCC Predicted gene structure (within gDNA segment 44763 to 50960): Exon 1 46874 47128 ( 255 n); cDNA 108 362 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E211417+ 0.863 255 0.413 C PGS_C08HBa0235H18.1+_SGN-E211417+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 167 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 227 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 287 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 347 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 362 hqPGS_C08HBa0235H18.1+_SGN-E211417+ (46874 47128) ******************************************************************************** EST sequence 25 +strand 786 n (File: SGN-E210798+) 1 TGACATCTTC TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 61 TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 121 GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 181 CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 241 CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 301 CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG 361 GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 421 TTCATTGCAC GGCCAATATA AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT 481 GTAACAACCC TTGTACCACG TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG 541 GCCCTACAGA GTTGTCCAAA TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC 601 AAGACGATCC TACAAGCACA TTTACTTGCC CNTGGTGGTA GTACAAACTA TAGGGTTGTC 661 TTTTGTCCTA ATGGTGTTGC TGATCCAAAT TTCCCCTTGG AGATGCCTGC AAGTACTGAT 721 GAAGTGGCCA AGTGAATTTG AGTTTCTTCA TTTTAAATCG CCCTCATTAG TCAACTGATC 781 TCTACC Predicted gene structure (within gDNA segment 44623 to 51910): Exon 1 46874 47128 ( 255 n); cDNA 122 376 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E210798+ 0.863 255 0.324 C PGS_C08HBa0235H18.1+_SGN-E210798+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 181 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 241 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 301 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 361 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 376 hqPGS_C08HBa0235H18.1+_SGN-E210798+ (46874 47128) ******************************************************************************** EST sequence 40 +strand 474 n (File: SGN-E250954+) 1 TTTGTTCTCT TCTTCCTTCT TTGTGTGACT TATACTTACT ATCGCACTAT TGAGGTACGC 61 AACAACTGTC CATACACCGT TTGGGCGGCA TCGACTCCGA TAGGCGGTGG TCGACGTCTC 121 AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC ACGTATATGG 181 GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC TGGTGATTGT 241 GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC CGAGTACGCC 301 TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG ATTTAATATT 361 CCAATGACTT TTGCCCCAAC AAAACCTAGT GGAGGAAAAT GTCACGCAAT TCATTGCACG 421 GCCAATATAA ATGGTGAATG TCCTCGCGCC CTTAAGGTAC CTGGAGGATG TAAA Predicted gene structure (within gDNA segment 44733 to 48900): Exon 1 46874 47128 ( 255 n); cDNA 111 365 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E250954+ 0.863 255 0.538 C PGS_C08HBa0235H18.1+_SGN-E250954+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 170 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 230 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 290 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 350 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 365 hqPGS_C08HBa0235H18.1+_SGN-E250954+ (46874 47128) ******************************************************************************** EST sequence 47 +strand 719 n (File: SGN-E210966+) 1 TGACATCTTC TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 61 TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 121 GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 181 CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 241 CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 301 CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG 361 GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 421 TTCATTGCAC GGCCAATATA AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT 481 GTAACAACCC TTGTACCACG TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG 541 GCCCTACAGA GTTGTCCAAA TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC 601 AAGACGATCC TACAAGCACA TTTACTTGCC CTGGTGGTAG TACAAACTAT AGGGTTGTCT 661 TTTGTCCTAA TGGTNGTGCT GATCCAAATT TCCCTTGGAG ATGCCCTGCA GTACTGATG Predicted gene structure (within gDNA segment 44623 to 51240): Exon 1 46874 47128 ( 255 n); cDNA 122 376 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E210966+ 0.863 255 0.355 C PGS_C08HBa0235H18.1+_SGN-E210966+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 181 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 241 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 301 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 361 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 376 hqPGS_C08HBa0235H18.1+_SGN-E210966+ (46874 47128) ******************************************************************************** EST sequence 49 +strand 636 n (File: SGN-E211072+) 1 CTACTTGACA TCTTCTTTTG TTCTCTTCTT CCTTCTTTGT GTGACTTATA CTTATGCTGC 61 CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA CTCCGATAGG 121 CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA GGGGAACTAA 181 GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA GAGGTACATG 241 TCAGACTGGT GATTGTGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC CCCCAAACAC 301 CCTAGCCGAG TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA TTTCTTTAGT 361 CGATGGATTT AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG GAAAATGTCA 421 CGCAATTCAT TGCACGGCCA ATATAAATGG TGAATGTCCT CGCGCCCTTA AGGTACCTGG 481 AGGATGTAAC AACCCTTGTA CCACGTTTGG AGGACAACAA TATTGTTGCA CCCAAGGTCC 541 ATGTGGCCCT ACAGAGTTGT CCAAATTTTT CAAGAAAAGA TGTCCCGATG CTTATAGCTA 601 CCCACAAGAC GATCCTACAA GCACATTTAC TTGCCC Predicted gene structure (within gDNA segment 44573 to 50960): Exon 1 46874 47128 ( 255 n); cDNA 127 381 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E211072+ 0.863 255 0.401 C PGS_C08HBa0235H18.1+_SGN-E211072+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 186 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 246 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 306 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 366 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 381 hqPGS_C08HBa0235H18.1+_SGN-E211072+ (46874 47128) ******************************************************************************** EST sequence 52 +strand 787 n (File: SGN-E340366+) 1 TGAGATCTTC TTTTGTTTTC TTCCTTCTTG CTTTTGTGAC TTACACTTAT GCTGCCACTT 61 TCGAGGTACG CAACAACTGT CCATACACCG TCTGGGCGGC GTCGACCCCA ATAGGCGGTG 121 GTCGACGTCT TGATCGAGGC CAAACATGGG TCATCAATGC ACCGAGGGGC ACTAAGATGG 181 CACGTATATG GGGTCGTACG AATTGCAACT TTGATGGTGC TGGTAGAGGT TCATGTCAGA 241 CTGGTGATTG TGGTGGGGTC TTGCAATGTA CCGGGTGGGG CAAACCACCA AACACCCTGG 301 CCGAGTACGC CTTGGACCAG TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG 361 GATTTAATAT TCCAATGACT TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA 421 TTCATTGTAC GGCTAATATA AATGGTGAAT GTCCTGGTTC ACTTAGGGTA CCCGGAGGAT 481 GTAACAATCC TTGTACCACG TTCGGAGGAC AACAATATTG TTGCACACAA GGTCCATGTG 541 GCCCTACTGA TTTGTCGAGA TTTTTAAACA AAGATGTCCT GATGCGTATA GCTACCCACA 601 AGATGATCCT ACTAGCACAT TTACTTGCCC TAGTGGTAGT ACAAATTATA NGGGTTGTTT 661 TTTGTCCTAA TGGTGTTACT AGCCCAAATT TCCCCTTGGA GATGCCCTCA AGTGATGAAG 721 AGGCTAAGTA AAATTGAGTC ACTTTCTTTT AAATTGCTTG AAGTAATCGA GTTATATAAT 781 TGGCTTG Predicted gene structure (within gDNA segment 44686 to 51920): Exon 1 46874 47128 ( 255 n); cDNA 122 376 ( 255 n); score: 0.906 MATCH C08HBa0235H18.1+ SGN-E340366+ 0.906 255 0.324 C PGS_C08HBa0235H18.1+_SGN-E340366+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || |||||| |||| ||||| | || ||| |||||||||| | |||||||| |||||||||| TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA CCGAGGGGCA CTAAGATGGC 181 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| |||||||| | | |||||||| ||| |||||| |||||||||| | ||| |||| ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT GGTAGAGGTT CATGTCAGAC 241 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| ||||| |||| |||| ||||| ||||||||| ||||| |||| ||||| |||| TGGTGATTGT GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA ACACCCTGGC 301 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||||| |||||||||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 361 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 376 hqPGS_C08HBa0235H18.1+_SGN-E340366+ (46874 47128) ******************************************************************************** EST sequence 54 +strand 710 n (File: SGN-E263607+) 1 TTTGTTCTCT TCTTCCTTCT TTGTGTGACT TATACTTATG CTGCCACTAT TGAGGTACGC 61 AACAACTGTC CATACACCGT TTGGGCGGCA TCGACTCCGA TAGGCGGTGG TCGACGTCTC 121 AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC ACGTATATGG 181 GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC TGGTGATTGT 241 GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC CGAGTACGCC 301 TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG ATTTAATATT 361 CCAATGACTT TTGCCCCAAC AAAACCTAGT GGAGGAAAAT GTCACGCAAT TCATTGCACG 421 GCCAATATAA ATGGTGAATG TCCTCGCGCC CTTAAGGTAC CTGGAGGATG TAACAACCCT 481 TGTACCACGT TTGGAGGACA ACAATATTGT TGCACCCAAG GTCCATGTGG CCCTACAGAG 541 TTGTCCAAAT TTTTCAAGAA AAGATGTCCC GATGCTTATA GCTACCCACA AGACGATCCT 601 ACAAGCACAT TTACTTGCCC TGGTGGTAGT ACAAACTATA NGGTTGTCTT TTGTCCTAAT 661 GGTGTTGCTG ATCCAAATTT CCCCTTGGAG ATGCCTGCAA GTACTGATGA Predicted gene structure (within gDNA segment 44733 to 51860): Exon 1 46874 47128 ( 255 n); cDNA 111 365 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E263607+ 0.863 255 0.359 C PGS_C08HBa0235H18.1+_SGN-E263607+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 170 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 230 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 290 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 350 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 365 hqPGS_C08HBa0235H18.1+_SGN-E263607+ (46874 47128) ******************************************************************************** EST sequence 104 +strand 630 n (File: SGN-E213091+) 1 TGACATCTTC TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 61 TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 121 GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 181 CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 241 CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 301 CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG 361 GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 421 TTCATTGCAC GGCCAATATA AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT 481 GTAACAACCC TTGTACCACG TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG 541 GCCCTACAGA GTTGTCCAAA TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC 601 AGACGATCCT ACNAGCACAT TTACTTGCCC Predicted gene structure (within gDNA segment 44623 to 50350): Exon 1 46874 47128 ( 255 n); cDNA 122 376 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E213091+ 0.863 255 0.405 C PGS_C08HBa0235H18.1+_SGN-E213091+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 181 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 241 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 301 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 361 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 376 hqPGS_C08HBa0235H18.1+_SGN-E213091+ (46874 47128) ******************************************************************************** EST sequence 107 +strand 632 n (File: SGN-E302616+) 1 TGAGATCTTC TTTTGTTTTC TTCCTTCTTG CTTTTGTGAC TTACACTTAT GCTGCCACTT 61 TCGAGGTACG CAACAACTGT CCATACACCG TCTGGGCGGC GTCGACCCCA ATAGGCGGTG 121 GTCGACGTCT TGATCGAGGC CAAACATGGG TCATCAATGC ACCGAGGGGC ACTAAGATGG 181 CACGTATATG GGGTCGTACG AATTGCAACT TTGATGGTGC TGGTAGAGGT TCATGTCAGA 241 CTGGTGATTG TGGTGGGGTC TTGCAATGTA CCGGGTGGGG CAAACCACCA AACACCCTGG 301 CCGAGTACGC CTTGGACCAG TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG 361 GATTTAATAT TCCAATGACT TTCGCCCCGA CCAATCCTAG TGGAGGGAAA TGCCATGCAA 421 TTCATTGTAC GGCTAATATA AATGGTGAAT GTCCTGGTTC ACTTAGGGTA CCCGGAGGAT 481 GTAACAATCC TTGTACCACG TTCGGAGGAC AACAATATTG TTGCACACAA GGTCCATGTG 541 GCCCTACTGA TTTGTCGGGA TTGTGCAAAC AGAGATGTCC TGATGCGTAT AGCTACCCAC 601 AGGATGATCC TACTAGCACA TTTACTTGCC CT Predicted gene structure (within gDNA segment 44686 to 50370): Exon 1 46874 47128 ( 255 n); cDNA 122 376 ( 255 n); score: 0.906 MATCH C08HBa0235H18.1+ SGN-E302616+ 0.906 255 0.403 C PGS_C08HBa0235H18.1+_SGN-E302616+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || |||||| |||| ||||| | || ||| |||||||||| | |||||||| |||||||||| TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA CCGAGGGGCA CTAAGATGGC 181 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| |||||||| | | |||||||| ||| |||||| |||||||||| | ||| |||| ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT GGTAGAGGTT CATGTCAGAC 241 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| ||||| |||| |||| ||||| ||||||||| ||||| |||| ||||| |||| TGGTGATTGT GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA ACACCCTGGC 301 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||||| |||||||||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 361 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 376 hqPGS_C08HBa0235H18.1+_SGN-E302616+ (46874 47128) ******************************************************************************** EST sequence 112 +strand 704 n (File: SGN-E212978+) 1 AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 61 TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 121 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 181 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 241 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 301 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 361 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 421 AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 481 GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC 541 CCAAGGTCCA TGTGGCCCTA CAGAGTTGTC CAAATTTTTC AAGAAAAGAT GTCCCGATGC 601 TTATAGCTAC CCACAAGACG ATCCTACAAG CACATTTACT TGCCCTGGTG GTAGTCAAAC 661 TATAGGGTTG TCTTTTGTCC TAATGGTGTT GCTGATCAAA TTTC Predicted gene structure (within gDNA segment 44483 to 50950): Exon 1 46874 47128 ( 255 n); cDNA 136 390 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E212978+ 0.863 255 0.362 C PGS_C08HBa0235H18.1+_SGN-E212978+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 195 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 255 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 315 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 375 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 390 hqPGS_C08HBa0235H18.1+_SGN-E212978+ (46874 47128) ******************************************************************************** EST sequence 121 +strand 463 n (File: SGN-E264072+) 1 TGACATCTTC TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 61 TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 121 GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 181 CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 241 CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 301 CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG 361 GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 421 TTCATTGCAC GGCCAATATA AATGGTGAAT GTCCTCGCGC CCT Predicted gene structure (within gDNA segment 44623 to 48680): Exon 1 46874 47128 ( 255 n); cDNA 122 376 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E264072+ 0.863 255 0.551 C PGS_C08HBa0235H18.1+_SGN-E264072+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 181 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 241 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 301 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 361 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 376 hqPGS_C08HBa0235H18.1+_SGN-E264072+ (46874 47128) ******************************************************************************** EST sequence 128 +strand 639 n (File: SGN-E335205+) 1 TGGCCTACTT GAGATCTTCT TTTGTTTTCT TCCTTCTTGC TTTTGTGACT TACACTTATG 61 CTGCCACTTT CGAGGTACGC AACAACTGTC CATACACCGT CTGGGCGGCG TCGACCCCAA 121 TAGGCGGTGG TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA CCGAGGGGCA 181 CTAAGATGGC ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT GGTAGAGGTT 241 CATGTCAGAC TGGTGATTGT GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA 301 ACACCCTGGC CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT 361 TAGTCGATGG ATTTAATATT CCAATGACTT TCGCCCCGAC CAATCCTAGT GGAGGGAAAT 421 GCCATGCAAT TCATTGTACG GCTAATATAA ATGGTGAATG TCCTGGTTCA CTTAGGGTAC 481 CCGGAGGATG TAACAATCCT TGTACCACGT TCGGAGGACA ACAATATTGT TGCACACAAG 541 GTCCATGTGG CCCTACTGAT TTGTCGAGAT TTTTCAAACA AAGATGTCCT GATGCGTATA 601 GCTACCCACA AGATGATCCT ACTAACACAT TTACTTGCC Predicted gene structure (within gDNA segment 44596 to 50350): Exon 1 46874 47128 ( 255 n); cDNA 131 385 ( 255 n); score: 0.906 MATCH C08HBa0235H18.1+ SGN-E335205+ 0.906 255 0.399 C PGS_C08HBa0235H18.1+_SGN-E335205+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || |||||| |||| ||||| | || ||| |||||||||| | |||||||| |||||||||| TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA CCGAGGGGCA CTAAGATGGC 190 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| |||||||| | | |||||||| ||| |||||| |||||||||| | ||| |||| ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT GGTAGAGGTT CATGTCAGAC 250 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| ||||| |||| |||| ||||| ||||||||| ||||| |||| ||||| |||| TGGTGATTGT GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA ACACCCTGGC 310 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||||| |||||||||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 370 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 385 hqPGS_C08HBa0235H18.1+_SGN-E335205+ (46874 47128) ******************************************************************************** EST sequence 134 +strand 683 n (File: SGN-E212433+) 1 TGACATCTTC TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 61 TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 121 GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 181 CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 241 CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 301 CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG 361 GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 421 TTCATTGCAC GGCCAATATA AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT 481 GTAACAACCC TTGTACCACG TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG 541 GCCCTACAGA GTTGTCCAAA TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC 601 AAGACGATCC TACAAGCACA TTTACTTGCC CTGGTGGTAG TACAAACTAT AGGGNTGTCT 661 TTTGTCCTAA TGGTGTTGCT GAT Predicted gene structure (within gDNA segment 44623 to 50880): Exon 1 46874 47128 ( 255 n); cDNA 122 376 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E212433+ 0.863 255 0.373 C PGS_C08HBa0235H18.1+_SGN-E212433+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 181 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 241 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 301 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 361 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 376 hqPGS_C08HBa0235H18.1+_SGN-E212433+ (46874 47128) ******************************************************************************** EST sequence 138 +strand 602 n (File: SGN-E303865+) 1 TTATACTTAT GCTGCCACTA TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC 61 ATCGACTCCG ATAGGCGGTG GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC 121 TCCGAGGGGA ACTAAGATGG CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC 181 AGGCAGAGGT ACATGTCAGA CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG 241 CAAACCCCCA AACACCCTAG CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG 301 GGACATTTCT TTAGTCGATG GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG 361 TGGAGGAAAA TGTCACGCAA TTCATTGCAC GGCCAATATA AATGGTGAAT GTCCTCGCGC 421 CCTTAAGGTA NCCTGGAGGA TGTAACAACC CTTGTACCAC GTTTGGAGGA CAACAATATT 481 GTTGCACCCA AGGTCCATGT GGCCCTACAG AGTTGTCCAA ATTTTTCAAG AAAAGATGTC 541 CCGATGCTTA TAGCTACCCA CAAGACGATC CTACAAGCAC ATTTACTTGC CCTGGTGGTA 601 GT Predicted gene structure (within gDNA segment 45023 to 50470): Exon 1 46874 47128 ( 255 n); cDNA 82 336 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E303865+ 0.863 255 0.424 C PGS_C08HBa0235H18.1+_SGN-E303865+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 141 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 201 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 261 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 321 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 336 hqPGS_C08HBa0235H18.1+_SGN-E303865+ (46874 47128) ******************************************************************************** EST sequence 140 +strand 642 n (File: SGN-E212383+) 1 AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 61 TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 121 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 181 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 241 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 301 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 361 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 421 AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 481 GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC 541 CCAAGGTCCA TGTGGCCCTA CAGAGTTGTC CAAATTTTTC AAGAAAAGAT GTCCCGATGC 601 TTATAGCTAC CCACAAGACG ATCCCTACAG CACATTTACT TG Predicted gene structure (within gDNA segment 44483 to 50330): Exon 1 46874 47128 ( 255 n); cDNA 136 390 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E212383+ 0.863 255 0.397 C PGS_C08HBa0235H18.1+_SGN-E212383+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 195 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 255 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 315 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 375 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 390 hqPGS_C08HBa0235H18.1+_SGN-E212383+ (46874 47128) ******************************************************************************** EST sequence 152 +strand 490 n (File: SGN-E204618+) 1 CATCTTCTTT TGTTCTGTTC TTCCTTCTTT GTGTGACTTA TACTTATGCT GCCACTATTG 61 AGGTACGCAA CAACTGTCCA TACACCGTTT GGGCGGCATC GACTCCGATA GGCGGTGGTC 121 GACGTCTCAA TCGAGGCCAA ACATGGGTCA TCAATGCTCC GAGGGGAACT AAGATGGCAC 181 GTATATGGGG TCGTACTGGT TGCAACTTTA ATGCTGCAGG CAGAGGTACA TGTCAAACTG 241 GTGATTGTGG AGGAGTCTTA CAGTGTACCG GATGGGGCAA ACCCCCAAAC ACCCTAGCCG 301 AGTACGCCTT GGACCAGTTT AGCAACTTAG ATTTTTGGGA CATTTCTTTA GTCGATGGAT 361 TTAATATTCC AATGACTTTT GCCCCAACAA AACCTAGTGG AGGAAAATGT CACGCAATTC 421 ATTGCACGGG CAATATAAAT GGTGAATGTC CTCGCGCCCT TAAGGTACCT GGAGGATGTA 481 ACAACCCTTG Predicted gene structure (within gDNA segment 44653 to 48980): Exon 1 46874 47128 ( 255 n); cDNA 119 373 ( 255 n); score: 0.855 MATCH C08HBa0235H18.1+ SGN-E204618+ 0.855 255 0.520 C PGS_C08HBa0235H18.1+_SGN-E204618+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 178 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| | || ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAAAC 238 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| || ||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGAGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 298 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 358 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 373 hqPGS_C08HBa0235H18.1+_SGN-E204618+ (46874 47128) ******************************************************************************** EST sequence 166 +strand 534 n (File: SGN-E250262+) 1 AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 61 TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 121 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 181 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 241 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 301 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 361 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 421 AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 481 GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTG Predicted gene structure (within gDNA segment 44483 to 49250): Exon 1 46874 47128 ( 255 n); cDNA 136 390 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E250262+ 0.863 255 0.478 C PGS_C08HBa0235H18.1+_SGN-E250262+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 195 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 255 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 315 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 375 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 390 hqPGS_C08HBa0235H18.1+_SGN-E250262+ (46874 47128) ******************************************************************************** EST sequence 174 +strand 703 n (File: SGN-E213606+) 1 TGACATCTTC TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 61 TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 121 GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 181 CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 241 CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 301 CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG 361 GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 421 TTCATTGCAC GGCCAATATA AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT 481 GTAACAACCC TTGTACCACG TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG 541 GCCCTACAGA GTTGTCCAAA TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC 601 AAGACGATCC TACAAGCACA TTTACTTGCC CTGGTGGTAG TACAAACTAT AGGGTTGTCT 661 TTTGTCCTAA TGGTGTTGCT GATCCAAATT TCCCCTTGGA AAT Predicted gene structure (within gDNA segment 44623 to 51080): Exon 1 46874 47128 ( 255 n); cDNA 122 376 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E213606+ 0.863 255 0.363 C PGS_C08HBa0235H18.1+_SGN-E213606+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 181 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 241 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 301 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 361 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 376 hqPGS_C08HBa0235H18.1+_SGN-E213606+ (46874 47128) ******************************************************************************** EST sequence 187 +strand 491 n (File: SGN-E205046+) 1 AAAATAGTTC CACAAACATG GCCTACTTGA GATCTTCTGT TGTTTTCTTC CTTCTTGCTT 61 TTGTGACTTA CACTTATGCT GCCACTTTCG AGGTACGCAA CAACTGTCCA TACACCGTCT 121 GGGCGGCGTC GACCCCAATA GGCGGTGGTC GACGTCTTGA TCGAGGCCAA ACATGGGTCA 181 TCAATGCACC GAGGGGCACT AAGATGGCAC GTATATGGGG TCGTACGAAT TGCAACTTTG 241 ATGGTGCTGG TAGAGGTTCA TGTCAGACTG GTGATTGTGG TGGGGTCTTG CAATGTACCG 301 GGTGGGGCAA ACCACCAAAC ACCCTGGCCG AGTACGCCTT GGACCAGTTT AGCAACCTAG 361 ATTTCTGGGA CATTTCTTTA GTCGATGGAT TTAATATTCC AATGACTTTC GCCCCGACCA 421 ATCCTAGTGG AGGGAAATGC CATGCAATTC ATTGTACGGC TAATATAAAT GGTGAATGTC 481 CTGGTTCACT T Predicted gene structure (within gDNA segment 44416 to 48690): Exon 1 46874 47128 ( 255 n); cDNA 149 403 ( 255 n); score: 0.906 MATCH C08HBa0235H18.1+ SGN-E205046+ 0.906 255 0.519 C PGS_C08HBa0235H18.1+_SGN-E205046+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || |||||| |||| ||||| | || ||| |||||||||| | |||||||| |||||||||| TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA CCGAGGGGCA CTAAGATGGC 208 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| |||||||| | | |||||||| ||| |||||| |||||||||| | ||| |||| ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT GGTAGAGGTT CATGTCAGAC 268 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| ||||| |||| |||| ||||| ||||||||| ||||| |||| ||||| |||| TGGTGATTGT GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA ACACCCTGGC 328 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||||| |||||||||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 388 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 403 hqPGS_C08HBa0235H18.1+_SGN-E205046+ (46874 47128) ******************************************************************************** EST sequence 189 +strand 604 n (File: SGN-E255554+) 1 TCTTCCTTCT TTGTGTGACT TATACTTATG CTGCCACTAT TGAGGTACGC AACAACTGTC 61 CATACACCGT TTGGGCGGCA TCGACTCCGA TAGGCGGTGG TCGACGTCTC AATCGAGGCC 121 AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC ACGTATATGG GGTCGTACTG 181 GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC TGGTGATTGT GGTGGAGTCT 241 TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC CGAGTACGCC TTGGACCAGT 301 TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG ATTTAATATT CCAATGACTT 361 TTGCCCCAAC AAAACCTAGT GGAGGAAAAT GTCACGCAAT TCATTGCACG GCCAATATAA 421 ATGGTGAATG TCCTCGCGCC CTTAAGGTAC CTGGAGGATG TAACAACCCT TGTACCACGT 481 TTGGAGGACA ACAATATTGT TGCACCCAAG GTCCATGTGG CCCTACAGAG TTGTCCAAAT 541 TTTTCAAGAA AAGATGTCCC GATGCTTATA GCTACCCACA AGACGATCCT ACAAGCACAT 601 TTAC Predicted gene structure (within gDNA segment 44833 to 50300): Exon 1 46874 47128 ( 255 n); cDNA 101 355 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E255554+ 0.863 255 0.422 C PGS_C08HBa0235H18.1+_SGN-E255554+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 160 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 220 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 280 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 340 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 355 hqPGS_C08HBa0235H18.1+_SGN-E255554+ (46874 47128) ******************************************************************************** EST sequence 194 +strand 659 n (File: SGN-E214263+) 1 AAAATAGTTC CACAAACATG GCCTACTTGA GATCTTCTTT TGTTTTCTTC CTTCTTGCTT 61 TTGTGACTTA CACTTATGCT GCCACTTTCG AGGTACGCAA CAACTGTCCA TACACCGTCT 121 GGGCGGCGTC GACCCCAATA GGCGGTGGTC GACGTCTTGA TCGAGGCCAA ACATGGGTCA 181 TCAATGCACC GAGGGGCACT AAGATGGCAC GTATATGGGG TCGTACGAAT TGCAACTTTG 241 ATGGTGCTGG TAGAGGTTCA TGTCAGACTG GTGATTGTGG TGGGGTCTTG CAATGTACCG 301 GGTGGGGCAA ACCACCAAAC ACCCTGGCCG AGTACGCCTT GGACCAGTTT AGCAACCTAG 361 ATTTCTGGGA CATTTCTTTA GTCGATGGAT TTAATATTCC AATGACTTTC GCCCCGACCA 421 ATCCTAGTGG AGGGAAATGC CATGCAATTC ATTGTACGGC TAATATAAAT GGTGAATGTC 481 CTGGTTCACT TANGGTACCC GGAGGATGTA ACAATCCTTG TACCACGTTC GGAGGACAAC 541 AATATTGTTG CACACAAGGT CCATGTGGCC CTACTGATTT GTCGAGATTT TCAAACAAAG 601 ATGTCCTGAT GCGTATAGCT ACCCACAAGA TGATCCTACT AGCACATTTA CTTGCCCCT Predicted gene structure (within gDNA segment 44416 to 50370): Exon 1 46874 47128 ( 255 n); cDNA 149 403 ( 255 n); score: 0.906 MATCH C08HBa0235H18.1+ SGN-E214263+ 0.906 255 0.387 C PGS_C08HBa0235H18.1+_SGN-E214263+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || |||||| |||| ||||| | || ||| |||||||||| | |||||||| |||||||||| TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA CCGAGGGGCA CTAAGATGGC 208 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| |||||||| | | |||||||| ||| |||||| |||||||||| | ||| |||| ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT GGTAGAGGTT CATGTCAGAC 268 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| ||||| |||| |||| ||||| ||||||||| ||||| |||| ||||| |||| TGGTGATTGT GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA ACACCCTGGC 328 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||||| |||||||||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 388 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 403 hqPGS_C08HBa0235H18.1+_SGN-E214263+ (46874 47128) ******************************************************************************** EST sequence 203 +strand 518 n (File: SGN-E214938+) 1 CAAACATGGG CTACTTGACA TCTTCTTTTG TTCTCTTCTT CCTTCTTTGT GTGACTTATA 61 CTTATGCTGC CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA 121 CTCCGATAGG CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA 181 GGGGAACTAA GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA 241 GAGGTACATG TCAGACTGGT GATTGTGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC 301 CCCCAAACAC CCTAGCCGAG TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA 361 TTTCTTTAGT CGATGGATTT AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG 421 GAAAATGTCA CGCAATTCAT TGCACGGCCA ATATAAATGG TGAATGTCCT CGCGCCCTTA 481 AGGTACCTGG AGGATGTAAC AACCCTTGTA CCACGTTT Predicted gene structure (within gDNA segment 44473 to 49080): Exon 1 46874 47128 ( 255 n); cDNA 137 391 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E214938+ 0.863 255 0.492 C PGS_C08HBa0235H18.1+_SGN-E214938+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 196 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 256 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 316 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 376 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 391 hqPGS_C08HBa0235H18.1+_SGN-E214938+ (46874 47128) ******************************************************************************** EST sequence 206 +strand 542 n (File: SGN-E215146+) 1 CAAACATGGG CTACTTGACA TCTTCTTTTG TTCTCTTCTT CCTTCTTTGT GTGACTTATA 61 CTTATGCTGC CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA 121 CTCCGATAGG CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA 181 GGGGAACTAA GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA 241 GAGGTACATG TCAGACTGGT GATTGTGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC 301 CCCCAAACAC CCTAGCCGAG TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA 361 TTTCTTTAGT CGATGGATTT AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG 421 GAAAATGTCA CGCAATTCAT TGCACGGCCA ATATAAATGG TGAATGTCCT CGCGCCCTTA 481 AGGTACCTGG AGGATGTAAC AACCCTTGTA CCACGTTTGG AGGACAACAA TATTGTTGCA 541 CC Predicted gene structure (within gDNA segment 44473 to 49320): Exon 1 46874 47128 ( 255 n); cDNA 137 391 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E215146+ 0.863 255 0.470 C PGS_C08HBa0235H18.1+_SGN-E215146+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 196 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 256 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 316 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 376 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 391 hqPGS_C08HBa0235H18.1+_SGN-E215146+ (46874 47128) ******************************************************************************** EST sequence 208 +strand 506 n (File: SGN-E252003+) 1 TTTGTTCTCT TCTTCCTTCT TTGTGTGACT TATACTTATG CTGCCACTAT TGAGGTACGC 61 AACAACTGTC CATACACCGT TTGGGCGGCA TCGACTCCGA TAGGCGGTGG TCGACGTCTC 121 AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC ACGTATATGG 181 GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC TGGTGATTGT 241 GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC CGAGTACGCC 301 TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG ATTTAATATT 361 CCAATGACTT TTGCCCCAAC AAAACCTAGT GGAGGAAAAT GTCACGCAAT TCATTGCACG 421 GCCAATATAA ATGGTGAATG TCCTCGCGCC CTTAAGGTAC CTGGAGGATG TAACAACCCT 481 TGTACCACGT TTGGAGGACA ACAATA Predicted gene structure (within gDNA segment 44733 to 49220): Exon 1 46874 47128 ( 255 n); cDNA 111 365 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E252003+ 0.863 255 0.504 C PGS_C08HBa0235H18.1+_SGN-E252003+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 170 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 230 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 290 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 350 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 365 hqPGS_C08HBa0235H18.1+_SGN-E252003+ (46874 47128) ******************************************************************************** EST sequence 216 +strand 632 n (File: SGN-E251623+) 1 TGACATCTTC TTTTGGTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 61 TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 121 GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 181 CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 241 CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 301 CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG 361 GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 421 TTCATTGCAC GGCCAATATA AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT 481 GTAACAACCC TTGTACCACG TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG 541 GCCCTACAGA GTTGTCCAAA TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC 601 AAGACGATCC TACAAGCACA TTTACTTGCC CT Predicted gene structure (within gDNA segment 44623 to 50370): Exon 1 46874 47128 ( 255 n); cDNA 122 376 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E251623+ 0.863 255 0.403 C PGS_C08HBa0235H18.1+_SGN-E251623+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 181 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 241 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 301 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 361 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 376 hqPGS_C08HBa0235H18.1+_SGN-E251623+ (46874 47128) ******************************************************************************** EST sequence 225 +strand 477 n (File: SGN-E202164+) 1 AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 61 TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 121 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 181 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 241 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 301 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 361 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 421 AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCT Predicted gene structure (within gDNA segment 44483 to 48680): Exon 1 46874 47128 ( 255 n); cDNA 136 390 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E202164+ 0.863 255 0.535 C PGS_C08HBa0235H18.1+_SGN-E202164+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 195 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 255 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 315 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 375 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 390 hqPGS_C08HBa0235H18.1+_SGN-E202164+ (46874 47128) ******************************************************************************** EST sequence 227 +strand 493 n (File: SGN-E205594+) 1 CTACTTGACA TCTTCTTTTG TTCTCTTCTT CCTTCTTTGT GTGACTGGTG CTTATGCTGC 61 CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCAA CTCCGATAGG 121 CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA GGGGAACTAA 181 GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA GAGGTACATG 241 TCAGACTGGT GATTGTGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC CCCCAAACAC 301 CCTAGCCGAG TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA TTTCTTTAGT 361 CGATGGATTT AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAATGGAG GAAAATGTCA 421 CGCAATTCAT TGCACGGCCA ATATAAATGG TGAATGTCCT CGCGCCCTTA AGGTACCTGG 481 AGGATGTAAC AAC Predicted gene structure (within gDNA segment 44573 to 48930): Exon 1 46874 47128 ( 255 n); cDNA 127 381 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E205594+ 0.863 255 0.517 C PGS_C08HBa0235H18.1+_SGN-E205594+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 186 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 246 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 306 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 366 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 381 hqPGS_C08HBa0235H18.1+_SGN-E205594+ (46874 47128) ******************************************************************************** EST sequence 234 +strand 624 n (File: SGN-E307742+) 1 GACATCTTCT TTTGTTCTCT TCTTCCTTCT TTGTGTGACT TATACTTATG CTGCCACTAT 61 TGAGGTACGC AACAACTGTC CATACACCGT TTGGGCGGCA TCGACTCCGA TAGGCGGTGG 121 TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 181 ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 241 TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 301 CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 361 ATTTAATATT CCAATGACTT TTGCCCCAAC AAAACCTAGT GGAGGAAAAT GTCACGCAAT 421 TCATTGCACG GCCAATATAA ATGGTGAATG TCCTCGCGCC CTTAAGGTAC CTGGAGGATG 481 TAACAACCCT TGTACCACGT TTGGAGGACA ACAATATTGT TGCACCCAAG GTCCATGTGG 541 CCCTACAGAG TTGTCCAAAT TTTTCAAGAA AAGATGTCCC GATGCTTATA GCTACCCACA 601 AGACGATCCT ACAAGCACAT TTAC Predicted gene structure (within gDNA segment 44633 to 50300): Exon 1 46874 47128 ( 255 n); cDNA 121 375 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E307742+ 0.863 255 0.409 C PGS_C08HBa0235H18.1+_SGN-E307742+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 180 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 240 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 300 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 360 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 375 hqPGS_C08HBa0235H18.1+_SGN-E307742+ (46874 47128) ******************************************************************************** EST sequence 239 +strand 713 n (File: SGN-E214128+) 1 TATACTTATG CTGCCACTAT TGAGGTACGC AACAACTGTC CATACACCGT TTGGGCGGCA 61 TCGACTCCGA TAGGCGGTGG TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT 121 CCGAGGGGAA CTAAGATGGC ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA 181 GGCAGAGGTA CATGTCAGAC TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC 241 AAACCCCCAA ACACCCTAGC CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG 301 GACATTTCTT TAGTCGATGG ATTTAATATT CCAATGACTT TTGCCCCAAC AAAACCTAGT 361 GGAGGAAAAT GTCACGCAAT TCATTGCACG GCCAATATAA ATGGTGAATG TCCTCGCGCC 421 CTTAAGGTAC CTGGAGGATG TAACAACCCT TGTACCACGT TTGGAGGACA ACAATATTGT 481 TGCACCCAAG GTCCATGTGG CCCTACAGAG TTGTCCAAAT TTTTCAAGAA AAGATGTCCC 541 GATGCTTATA GCTACCCACA AGACGATCCT ACAAGCACAT TTACTTGCCC TGGTGGTAGT 601 ACAAACTATA GGGTTGTCTT TTGTCCTAAT GGTNGTGCTG ATCCAATTTC CCCTTGGAGA 661 TGCCCTGCAG TACTGATGAA GTGGCCAAGT GATTTGAGTT TCTTCATTTA AAT Predicted gene structure (within gDNA segment 45033 to 51590): Exon 1 46874 47128 ( 255 n); cDNA 81 335 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E214128+ 0.863 255 0.358 C PGS_C08HBa0235H18.1+_SGN-E214128+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 140 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 200 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 260 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 320 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 335 hqPGS_C08HBa0235H18.1+_SGN-E214128+ (46874 47128) ******************************************************************************** EST sequence 255 +strand 455 n (File: SGN-E205290+) 1 GTGTGACTTA TACTTATGCT GCCACTATTG AGGTACGCAA CAACTGTGGA TACACCGTTT 61 GGGCGGCATC GACTCCGATA GGCGGTGGTC GACGTCTCAA TCGAGGCCAA ACATGGGTCA 121 TCAATGCTCC GAGGGGAACT AAGATGGCAC GTATATGGGG TCGTACTGGT TGCAACTTTA 181 ATGCTGCAGG CAGAGGTACA TGTCAGACTG GTGATTGTGG TGGAGTCTTA CAGTGTACCG 241 GATGGGGCAA ACCCCCAAAC ACCCTAGCCG AGTACGCCTT GGACCAGTTT AGCAACTTAG 301 ATTTTTGGGA CATTTCTTTA GTCGATGGAT TTAATATTCC AATGACTTTT GCCCCAACAA 361 AACCTAGTGG AGGAAAATGT CACGCAATTC ATTGCACGGC CAATATAAAT GGTGAATGTC 421 CTCGCGCCCT TAAGGTACCT GGAGGATGTA ACAAC Predicted gene structure (within gDNA segment 44953 to 48930): Exon 1 46874 47128 ( 255 n); cDNA 89 343 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E205290+ 0.863 255 0.560 C PGS_C08HBa0235H18.1+_SGN-E205290+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 148 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 208 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 268 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 328 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 343 hqPGS_C08HBa0235H18.1+_SGN-E205290+ (46874 47128) ******************************************************************************** EST sequence 259 +strand 499 n (File: SGN-E335641+) 1 TTCTTTGTGT GACTTATACT TATGCTGCCA CTATTGAGGT ACGCAACAAC TGTCCATACA 61 CCGTTTGGGC GGCATCGACT CCGATAGGCG GTGGTCGACG TCTCAATCGA GGCCAAACAT 121 GGGTCATCAA TGCTCCGAGG GGAACTAAGA TGGCACGTAT ATGGGGTCGT ACTGGTTGCA 181 ACTTTAATGC TGCAGGCAGA GGTACATGTC AGACTGGTGA TTGTGGTGGA GTCTTACAGT 241 GTACCGGATG GGGCAAACCC CCAAACACCC TAGCCGAGTA CGCCTTGGAC CAGTTTAGCA 301 ACTTAGATTT TTGGGACATT TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTTGCCC 361 CAACAAAACC TAGTGGAGGA AAATGTCACG CAATTCATTG CACGGCCAAT ATAAATGGTG 421 AATGTCCTCG CGCCCTTAAG GTACCTGGAG GATGTAACAA CCCTTGTACC ACGTTTGGAG 481 GACAACAATA TTGTTGCAC Predicted gene structure (within gDNA segment 44893 to 49310): Exon 1 46874 47128 ( 255 n); cDNA 95 349 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E335641+ 0.863 255 0.511 C PGS_C08HBa0235H18.1+_SGN-E335641+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 154 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 214 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 274 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 334 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 349 hqPGS_C08HBa0235H18.1+_SGN-E335641+ (46874 47128) ******************************************************************************** EST sequence 278 +strand 535 n (File: SGN-E275948+) 1 GCTACTTGAC ATCTTCTTTT GTTCTCTTCT TCCTTCTTTG AGTGACTTAT ACTTATGCTG 61 CCACTATTGA GGTACGCAAC AACTGTCCAT ACACCGTTTG GGCGGCATCG ACTCCGATAG 121 GCGGTGGTCG ACGTCTCAAT CGAGGCCAAA CATGGGTCAT CAATGCTCCG AGGGGAACTA 181 AGATGGCACG TATATGGGGT CGTACTGGTT GCAACTTTAA TGCTGCAGGC AGAGGTACAT 241 GTCAGACTGG TGATTGTGGT GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAACA 301 CCCTAGCCGA GTACGCCTTG GACCAGTTTA GCAACTTAGA TTTTTGGGAC ATTTCTTTAG 361 TCGATGGATT TAATATTCCA ATGACTTTTG CCCCAACAAA ACCTAGTGGA GGAAAATGTC 421 ACGCAATTCA TTGCACGGCC AATATAAATG GTGAATGTCC TCGCGCCCTT AAGGTACCTG 481 GAGGATGTAA CAACCCTTGT ACCACGTTTG GAGGACAACA ATATTGTTGC ACCCA Predicted gene structure (within gDNA segment 44563 to 49340): Exon 1 46874 47128 ( 255 n); cDNA 128 382 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E275948+ 0.863 255 0.477 C PGS_C08HBa0235H18.1+_SGN-E275948+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 187 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 247 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 307 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 367 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 382 hqPGS_C08HBa0235H18.1+_SGN-E275948+ (46874 47128) ******************************************************************************** EST sequence 282 +strand 538 n (File: SGN-E206152+) 1 GACATCTTCT TTTGTTCTCT TCTTCCTTCT TTGTGTGACT TATACTTATG CTGCCACTAT 61 TGAGGTACGC AACAACTGTC CATACACCGT TTGGGCGGCA TCGACTCCGA TAGGCGGTGG 121 TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 181 ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 241 TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 301 CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 361 ATTTAATATT CCAATGACTT TTGCCCCAAC AAAACCTAGT GGAGGAAAAT GTCACGCAAT 421 TCATTGCACG GCCAATATAA ATGGTGAATG TCCTCGCGCC CTTAAGGTAC CTGGAGGATG 481 TAACAACCCT TGTACCACGT TTGGAGGACA ACAATATTGT TGCACCCAAG GTCCATGT Predicted gene structure (within gDNA segment 44633 to 49440): Exon 1 46874 47128 ( 255 n); cDNA 121 375 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E206152+ 0.863 255 0.474 C PGS_C08HBa0235H18.1+_SGN-E206152+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 180 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 240 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 300 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 360 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 375 hqPGS_C08HBa0235H18.1+_SGN-E206152+ (46874 47128) ******************************************************************************** EST sequence 284 +strand 629 n (File: SGN-E276027+) 1 TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC TTATGCTGCC 61 ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC TCCGATAGGC 121 GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG 181 ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT 241 CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC 301 CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC 361 GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG AAAATGTCAC 421 GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA GGTACCTGGA 481 GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC CCAAGGTCCA 541 TGTGGCCCTA CAGAGTTGTC CAAATTTTTC AAGAAAAGAT GTCCCGATGC TTATAGCTAC 601 CCACAAGACG ATCCTACAAG CACATTTAC Predicted gene structure (within gDNA segment 44583 to 50300): Exon 1 46874 47128 ( 255 n); cDNA 126 380 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E276027+ 0.863 255 0.405 C PGS_C08HBa0235H18.1+_SGN-E276027+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 185 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 245 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 305 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 365 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 380 hqPGS_C08HBa0235H18.1+_SGN-E276027+ (46874 47128) ******************************************************************************** EST sequence 294 +strand 513 n (File: SGN-E207077+) 1 AATAGTTCCA CAAACATGGC CTACTTGAGA TCTTCTTTTG TTTTCTTCCT TCTTGCTTTT 61 GTGACTTACA CTTATGCTGC CACTTTCGAG GTACGCAACA ACTGTCCATA CACCGTCTGG 121 GCGGCGTCGA CCCCAATAGG CGGTGGTCGA CGTCTTGATC GAGGCCAAAC ATGGGTCATC 181 AATGCACCGA GGGGCACTAA GATGGCACGT ATATGGGGTC GTACGAATTG CAACTTTGAT 241 GGTGCTGGTA GAGGTTCATG TCAGACTGGT GATTGTGGTG GGGTCTTGCA ATGTACCGGG 301 TGGGGCAAAC CACCAAACAC CCTGGCCGAG TACGCCTTGG ACCAGTTTAG CAACCTAGAT 361 TTCTGGGACA TTTCTTTAGT CGATGGATTT AATATTCCAA TGACTTTCGC CCCGACCAAT 421 CCTAGTGGAG GGAAATGCCA TGCAATTCAT TGTACGGCTA ATATAAATGG TGAATGTCCT 481 GGTTCACNTT AGGGTACCCG GAGATGTAAC AAT Predicted gene structure (within gDNA segment 44436 to 48930): Exon 1 46874 47128 ( 255 n); cDNA 147 401 ( 255 n); score: 0.906 MATCH C08HBa0235H18.1+ SGN-E207077+ 0.906 255 0.497 C PGS_C08HBa0235H18.1+_SGN-E207077+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || |||||| |||| ||||| | || ||| |||||||||| | |||||||| |||||||||| TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA CCGAGGGGCA CTAAGATGGC 206 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| |||||||| | | |||||||| ||| |||||| |||||||||| | ||| |||| ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT GGTAGAGGTT CATGTCAGAC 266 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| ||||| |||| |||| ||||| ||||||||| ||||| |||| ||||| |||| TGGTGATTGT GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA ACACCCTGGC 326 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||||| |||||||||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 386 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 401 hqPGS_C08HBa0235H18.1+_SGN-E207077+ (46874 47128) ******************************************************************************** EST sequence 302 +strand 645 n (File: SGN-E276677+) 1 CATCTTCTTT TGTTCTCTTC TTCCTTCTTT GTGTGACTTA TACTTATGCT GCCACTATTG 61 AGGTACGCAA CAACTGTCCA TACACCGTTT GGGCGGCATC GACTCCGATA GGCGGTGGTC 121 GACGTCTCAA TCGAGGCCAA ACATGGGTCA TCAATGCTCC GAGGGGAACT AAGATGGCAC 181 GTATATGGGG TCGTACTGGT TGCAACTTTA ATGCTGCAGG CAGAGGTACA TGTCAGACTG 241 GTGATTGTGG TGGAGTCTTA CAGTGTACCG GATGGGGCAA ACCCCCAAAC ACCCTAGCCG 301 AGTACGCCTT GGACCAGTTT AGCAACTTAG ATTTTTGGGA CATTTCTTTA GTCGATGGAT 361 TTAATATTCC AATGACTTTT GCCCCAACAA AACCTAGTGG AGGAAAATGT CACGCAATTC 421 ATTGCACGGC CAATATAAAT GGTGAATGTC CTCGCGCCCT TAAGGTACCT GGAGGATGTA 481 ACAACCCTTG TACCACGTTT GGAGGACAAC AATATTGTTG CACCCAAGGT CCATGTGGCC 541 CTACAGAGTT GTCCAAATTT TTCAAGAAAA GATGTCCCGA TGCTTATAGC TACCCACAAG 601 ACGATCCTAC AAGCACATTT ACTTGCCCTG GTGGTAGTAC AAACT Predicted gene structure (within gDNA segment 44653 to 50530): Exon 1 46874 47128 ( 255 n); cDNA 119 373 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E276677+ 0.863 255 0.395 C PGS_C08HBa0235H18.1+_SGN-E276677+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 178 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 238 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 298 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 358 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 373 hqPGS_C08HBa0235H18.1+_SGN-E276677+ (46874 47128) ******************************************************************************** EST sequence 305 +strand 611 n (File: SGN-E256710+) 1 TCTTCCTTCT TTGTGTGACT TATACTTATG CTGCCACTAT TGAGGTACGC AACAACTGTC 61 CATACACCGT TTGGGCGGCA TCGACTCCGA TAGGCGGTGG TCGACGTCTC AATCGAGGCC 121 AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC ACGTATATGG GGTCGTACTG 181 GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC TGGTGATTGT GGTGGAGTCT 241 TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC CGAGTACGCC TTGGACCAGT 301 TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG ATTTAATATT CCAATGACTT 361 TTGCCCCAAC AAAACCTAGT GGAGGAAAAT GTCACGCAAT TCATTGCACG GCCAATATAA 421 ATGGTGAATG TCCTCGCGCC CTTAAGGTAC CTGGAGGATG TAACAACCCT TGTACCACGT 481 TTGGAGGACA ACAATATTGT TGCACCCAAG GTCCATGTGG CCCTACAGAG TTGTCCAAAT 541 TTTTCAAGAA AAGATGTCCC GATGCTTATA GCTACCCACA AGACGATCCT ACAAGCACAT 601 TTACTTGCCC T Predicted gene structure (within gDNA segment 44833 to 50370): Exon 1 46874 47128 ( 255 n); cDNA 101 355 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E256710+ 0.863 255 0.417 C PGS_C08HBa0235H18.1+_SGN-E256710+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 160 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 220 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 280 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 340 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 355 hqPGS_C08HBa0235H18.1+_SGN-E256710+ (46874 47128) ******************************************************************************** EST sequence 314 +strand 521 n (File: SGN-E274932+) 1 TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC TTATGCTGCC 61 ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC TCCGATAGGC 121 GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG 181 ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT 241 CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC 301 CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC 361 GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG AAAATGTCAC 421 GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA GGTACCTGGA 481 GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT A Predicted gene structure (within gDNA segment 44583 to 49220): Exon 1 46874 47128 ( 255 n); cDNA 126 380 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E274932+ 0.863 255 0.489 C PGS_C08HBa0235H18.1+_SGN-E274932+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 185 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 245 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 305 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 365 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 380 hqPGS_C08HBa0235H18.1+_SGN-E274932+ (46874 47128) ******************************************************************************** EST sequence 316 +strand 516 n (File: SGN-E274937+) 1 CATCTTCTTT TGTTCTCTTC TTCCTTCTTT GTGTGACTTA TACTTATGCT GCCACTATTG 61 AGGTACGCAA CAACTGTCCA TACACCGTTT GGGCGGCATC GACTCCGATA GGCGGTGGTC 121 GACGTCTCAA TCGAGGCCAA ACATGGGTCA TCAATGCTCC GAGGGGAACT AAGATGGCAC 181 GTATATGGGG TCGTACTGGT TGCAACTTTA ATGCTGCAGG CAGAGGTACA TGTCAGACTG 241 GTGATTGTGG TGGAGTCTTA CAGTGTACCG GATGGGGCAA ACCCCCAAAC ACCCTAGCCG 301 AGTACGCCTT GGACCAGTTT AGCAACTTAG ATTTTTGGGA CATTTCTTTA GTCGATGGAT 361 TTAATATTCC AATGACTTTT GCCCCAACAA AACCTAGTGG AGGAAAATGT CACGCAATTC 421 ATTGCACGGC CAATATAAAT GGTGAATGTC CTCGCGCCCT TAAGGTACCT GGAGGATGTA 481 ACAACCCTTG TACCACGTTT GGAGGACAAC AATATT Predicted gene structure (within gDNA segment 44653 to 49240): Exon 1 46874 47128 ( 255 n); cDNA 119 373 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E274937+ 0.863 255 0.494 C PGS_C08HBa0235H18.1+_SGN-E274937+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 178 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 238 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 298 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 358 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 373 hqPGS_C08HBa0235H18.1+_SGN-E274937+ (46874 47128) ******************************************************************************** EST sequence 320 +strand 531 n (File: SGN-E206874+) 1 TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC TTATGCTGCC 61 ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC TCCGATAGGC 121 GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG 181 ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTATAATG CTGCAGGCAG AGGTACATGT 241 CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC 301 CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC 361 GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG AAAATGTCAC 421 GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA GGTACCTGGA 481 GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC C Predicted gene structure (within gDNA segment 44583 to 49320): Exon 1 46874 47128 ( 255 n); cDNA 126 380 ( 255 n); score: 0.859 MATCH C08HBa0235H18.1+ SGN-E206874+ 0.859 255 0.480 C PGS_C08HBa0235H18.1+_SGN-E206874+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 185 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| ||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTA TAATGCTGCA GGCAGAGGTA CATGTCAGAC 245 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 305 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 365 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 380 hqPGS_C08HBa0235H18.1+_SGN-E206874+ (46874 47128) ******************************************************************************** EST sequence 326 +strand 524 n (File: SGN-E246947+) 1 AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 61 TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 121 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 181 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 241 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 301 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 361 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 421 AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 481 GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGAC Predicted gene structure (within gDNA segment 44483 to 49150): Exon 1 46874 47128 ( 255 n); cDNA 136 390 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E246947+ 0.863 255 0.487 C PGS_C08HBa0235H18.1+_SGN-E246947+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 195 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 255 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 315 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 375 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 390 hqPGS_C08HBa0235H18.1+_SGN-E246947+ (46874 47128) ******************************************************************************** EST sequence 337 +strand 741 n (File: SGN-E355282+) 1 GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG GGGCACTAAG 61 ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG AGGTTCATGT 121 CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC ACCAAACACC 181 CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT TTCTTTAGTC 241 GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG GAAATGCCAT 301 GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG GGTACCCGGA 361 GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT ATTGTTGCAC ACAAGGTCCA 421 TGTGGCCCTA CTGATTTGTC GAGATTTTTC AAACAAAGAT GTCCTGATGC GTATAGCTAC 481 CCACAAGATG ATCCTACTAG CACATTTACT TGCCCTAGTG GTAGTACAAA TTATAGGGTT 541 GTTTTTTGTC CTAATGGTGT TACTAGCCCA AATTTCCCCT TGGAGATGCC CTCAAGTGAT 601 GAAGAGGCTA AGTAAAATTG AGTCACTTTC TTTTAAATTG CTTGAAGTAG TCGAGTTATA 661 TAATTGGCTT GTAATAAACC TAATATAATT ACATGAATAA AAGTCACATC ATCACAAATA 721 TGTTGTTTTC GANNAAAAAA A Predicted gene structure (within gDNA segment 45846 to 52620): Exon 1 46874 47128 ( 255 n); cDNA 6 260 ( 255 n); score: 0.906 MATCH C08HBa0235H18.1+ SGN-E355282+ 0.906 255 0.344 C PGS_C08HBa0235H18.1+_SGN-E355282+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || |||||| |||| ||||| | || ||| |||||||||| | |||||||| |||||||||| TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA CCGAGGGGCA CTAAGATGGC 65 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| |||||||| | | |||||||| ||| |||||| |||||||||| | ||| |||| ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT GGTAGAGGTT CATGTCAGAC 125 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| ||||| |||| |||| ||||| ||||||||| ||||| |||| ||||| |||| TGGTGATTGT GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA ACACCCTGGC 185 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||||| |||||||||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 245 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 260 hqPGS_C08HBa0235H18.1+_SGN-E355282+ (46874 47128) ******************************************************************************** EST sequence 341 +strand 530 n (File: SGN-E275676+) 1 AACATGGGCT ACTTGACATC TTCTTTTGTT CTCTTCTTCC TTCTTTGTGT GACTTATACT 61 TATGCTGCCA CTATTGAGGT ACGCAACAAC TGTCCATACA CCGTTTGGGC GGCATCGACT 121 CCGATAGGCG GTGGTCGACG TCTCAATCGA GGCCAAACAT GGGTCATCAA TGCTCCGAGG 181 GGAACTAAGA TGGCACGTAT ATGGGGTCGT ACTGGTTGCA ACTTTAATGC TGCAGGCAGA 241 GGTACATGTC AGACTGGTGA TTGTGGTGGA GTCTTACAGT GTACCGGATG GGGCAAACCC 301 CCAAACACCC TAGCCGAGTA CGCCTTGGAC CAGTTTAGCA ACTTAGATTT TTGGGACATT 361 TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTTGCCC CAACAAAACC TAGTGGAGGA 421 AAATGTCACG CAATTCATTG CACGGCCAAT ATAAATGGTG AATGTCCTCG CGCCCTTAAG 481 GTACCTGGAG GATGTAACAA CCCTTGTACC ACGTTTGGAG GACAACAATA Predicted gene structure (within gDNA segment 44493 to 49220): Exon 1 46874 47128 ( 255 n); cDNA 135 389 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E275676+ 0.863 255 0.481 C PGS_C08HBa0235H18.1+_SGN-E275676+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 194 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 254 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 314 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 374 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 389 hqPGS_C08HBa0235H18.1+_SGN-E275676+ (46874 47128) ******************************************************************************** EST sequence 345 +strand 265 n (File: SGN-E210564+) 1 GCGGTGGTCG ACGTCTCAAT CGAGGCCAAA CATGGGTCAT CAATGCTCCG AGGGGAACTA 61 AGATGGCACG TATATGGGGT CGTACTGGTT GCAACTTTAA TGCTGCAGGC AGAGGTACAT 121 GTCAGACTGG TGATTGTGGT GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAACA 181 CCCTAGCCGA GTACGCCTTG GACCAGTTTA GCAACTTAGA TTTTTGGGAC ATTTCTTTAG 241 TCGATGGATT TAATATTCCA ATGAC Predicted gene structure (within gDNA segment 45763 to 47840): Exon 1 46874 47128 ( 255 n); cDNA 8 262 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E210564+ 0.863 255 0.962 C PGS_C08HBa0235H18.1+_SGN-E210564+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 67 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 127 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 187 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 247 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 262 hqPGS_C08HBa0235H18.1+_SGN-E210564+ (46874 47128) ******************************************************************************** EST sequence 346 +strand 551 n (File: SGN-E210488+) 1 ACATGGGCTA CTTGACATCT TCTTTTGTTC TCTTCTTCCT TCTTTGTGTG ACTTATACTT 61 ATGCTGCCAC TATTGAGGTA CGCAACAACT GTCCATACAC CGTTTGGGCG GCATCGACTC 121 CGATAGGCGG TGGTCGACGT CTCAATCGAG GCCAAACATG GGTCATCAAT GCTCCGAGGG 181 GAACTAAGAT GGCACGTATA TGGGGTCGTA CTGGTTGCAA CTTTAATGCT GCAGGCAGAG 241 GTACATGTCA GACTGGTGAT TGTGGTGGAG TCTTACAGTG TACCGGATGG GGCAAACCCC 301 CAAACACCCT AGCCGAGTAC GCCTTGGACC AGTTTAGCAA CTTAGATTTT TGGGACATTT 361 CTTTAGTCGA TGGATTTAAT ATTCCAATGA CTTTTGCCCC AACAAAACCT AGTGGAGGAA 421 AATGTCACGC AATTCATTGC ACGGCCAATA TAAATGGTGA ATGTCCTCGC GCCCTTAAGG 481 TACCTGGAGG ATGTAACAAC CCTTGTACCA CGTTTGGAGG ACAACAATAT TGTTGCACCC 541 AAGGTCCATG T Predicted gene structure (within gDNA segment 44503 to 49440): Exon 1 46874 47128 ( 255 n); cDNA 134 388 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E210488+ 0.863 255 0.463 C PGS_C08HBa0235H18.1+_SGN-E210488+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 193 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 253 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 313 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 373 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 388 hqPGS_C08HBa0235H18.1+_SGN-E210488+ (46874 47128) ******************************************************************************** EST sequence 367 +strand 411 n (File: SGN-E273584+) 1 GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG 61 ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT 121 CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC 181 CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC 241 GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG AAAATGTCAC 301 GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA GGTACCTGGA 361 GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC C Predicted gene structure (within gDNA segment 45783 to 49320): Exon 1 46874 47128 ( 255 n); cDNA 6 260 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E273584+ 0.863 255 0.620 C PGS_C08HBa0235H18.1+_SGN-E273584+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 65 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 125 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 185 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 245 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 260 hqPGS_C08HBa0235H18.1+_SGN-E273584+ (46874 47128) ******************************************************************************** EST sequence 372 +strand 561 n (File: SGN-E273742+) 1 AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 61 TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 121 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 181 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 241 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 301 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 361 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 421 AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 481 GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC 541 CCAAGGTCCA TGTGGCCCTA C Predicted gene structure (within gDNA segment 44483 to 49520): Exon 1 46874 47128 ( 255 n); cDNA 136 390 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E273742+ 0.863 255 0.455 C PGS_C08HBa0235H18.1+_SGN-E273742+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 195 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 255 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 315 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 375 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 390 hqPGS_C08HBa0235H18.1+_SGN-E273742+ (46874 47128) ******************************************************************************** EST sequence 377 +strand 534 n (File: SGN-E288509+) 1 TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC TTATGCTGCC 61 ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC TCCGATAGGC 121 GGTGGTCGAC GTCTCAGTCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG 181 ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT 241 CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC 301 CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC 361 GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG AAAATGTCAC 421 GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCCTAA GGTACCTGGA 481 GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC CCAA Predicted gene structure (within gDNA segment 44583 to 49350): Exon 1 46874 47128 ( 255 n); cDNA 126 380 ( 255 n); score: 0.859 MATCH C08HBa0235H18.1+ SGN-E288509+ 0.859 255 0.478 C PGS_C08HBa0235H18.1+_SGN-E288509+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| || ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AGTCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 185 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 245 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 305 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 365 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 380 hqPGS_C08HBa0235H18.1+_SGN-E288509+ (46874 47128) ******************************************************************************** EST sequence 387 +strand 645 n (File: SGN-E209968+) 1 CATCTTCTTT TGTTCTCTTC TTCCTTCTTT GTGTGACTTA TACTTATGCT GCCACTATTG 61 AGGTACGCAA CAACTGTCCA TACACCGTTT GGGCGGCATC GACTCCGATA GGCGGTGGTC 121 GACGTCTCAA TCGAGGCCAA ACATGGGTCA TCAATGCTCC GAGGGGAACT AAGATGGCAC 181 GTATATGGGG TCGTACTGGT TGCAACTTTA ATGCTGCAGG CAGAGGTACA TGTCAGACTG 241 GTGATTGTGG TGGAGTCTTA CAGTGTACCG GATGGGGCAA ACCCCCAAAC ACCCTAGCCG 301 AGTACGCCTT GGACCAGTTT AGCAACTTAG ATTTTTGGGA CATTTCTTTA GTCGATGGAT 361 TTAATATTCC AATGACTTTT GCCCCAACAA AACCTAGTGG AGGAAAATGT CACGCAATTC 421 ATTGCACGGC CAATATAAAT GGTGAATGTC CTCGCGCCCT TAAGGTACCT GGAGGATGTA 481 ACAACCCTTG TACCACGTTT GGAGGACAAC AATATTGTTG CACCCAAGGT CCATGTGGCC 541 CTACAGAGTT GTCCAAATTT TTCAAGAAAA GATGTCCCGA TGCTTATAGC TACCCACAAG 601 ACGATCCTAC AAGCACATTT ACTTGCCCTG GTGGTAGTAC AAACT Predicted gene structure (within gDNA segment 44653 to 50530): Exon 1 46874 47128 ( 255 n); cDNA 119 373 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E209968+ 0.863 255 0.395 C PGS_C08HBa0235H18.1+_SGN-E209968+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 178 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 238 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 298 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 358 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 373 hqPGS_C08HBa0235H18.1+_SGN-E209968+ (46874 47128) ******************************************************************************** EST sequence 410 +strand 525 n (File: SGN-E208900+) 1 CATCTTCTTT TGTTCTCTTC TTCCTTCTTT GTGTGACTTA TACTTATGCT GCCACTATTG 61 AGGTACGCAA CAACTGTCCA TACACCGTTT GGGCGGCATC GACTCCGATA GGCGGTGGTC 121 GACGTCTCAA TCGAGGCCAA ACATGGGTCA TCAATGCTCC GAGGGGAACT AAGATGGCAC 181 GTATATGGGG TCGTACTGGT TGCAACTTTA ATGCTGCAGG CAGAGGTACA TGTCAGACTG 241 GTGATTGTGG TGGAGTCTTA CAGTGTACCG GATGGGGCAA ACCCCCAAAC ACCCTAGCCG 301 AGTACGCCTT GGACCAGTTT AGCAACTTAG ATTTTTGGGA CATTTCTTTA GTCGATGGAT 361 TTAATATTCC AATGACTTTT GCCCCAACAA AACCTAGTGG AGGAAAATGT CACGCAATTC 421 ATTGCACGGC CAATATAAAT GGTGAATGTC CTCGCGCCCT TAAGGTACCT GGAGGATGTA 481 ACAACCCTTG TACCACGTTT GGAGGACAAC AATATTGTTG CACCC Predicted gene structure (within gDNA segment 44653 to 49330): Exon 1 46874 47128 ( 255 n); cDNA 119 373 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E208900+ 0.863 255 0.486 C PGS_C08HBa0235H18.1+_SGN-E208900+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 178 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 238 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 298 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 358 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 373 hqPGS_C08HBa0235H18.1+_SGN-E208900+ (46874 47128) ******************************************************************************** EST sequence 431 +strand 492 n (File: SGN-E209439+) 1 GTGACTTATA CTTATGCTGC CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG 61 GCGGCATCGA CTCCGATAGG CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC 121 AATGCTCCGA GGGGAACTAA GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT 181 GCTGCAGGCA GAGGTACATG TCAGACTGGT GATTGTGGTG GAGTCTTACA GTGTACCGGA 241 TGGGGCAAAC CCCCAAACAC CCTAGCCGAG TACGCCTTGG ACCAGTTTAG CAACTTAGAT 301 TTTTGGGACA TTTCTTTAGT CGATGGATTT AATATTCCAA TGACTTTTGC CCCAACAAAA 361 CCTAGTGGAG GAAAATGTCA CGCAATTCAT TGCACGGCCA ATATAAATGG TGAATGTCCT 421 CGCGCCCTTA AGGTACCTGG AGGATGTAAC AACCCTTGTA CCACGTTTGG AGGACAACAA 481 TATTGTTGCA CC Predicted gene structure (within gDNA segment 44973 to 49320): Exon 1 46874 47128 ( 255 n); cDNA 87 341 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E209439+ 0.863 255 0.518 C PGS_C08HBa0235H18.1+_SGN-E209439+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 146 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 206 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 266 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 326 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 341 hqPGS_C08HBa0235H18.1+_SGN-E209439+ (46874 47128) ******************************************************************************** EST sequence 433 +strand 487 n (File: SGN-E209259+) 1 CATCTTCTTT TGTTCTCTTC TTCCTTCTTT GTGTGACTTA TACTTATGCT GCCACTATTG 61 AGGTACGCAA CAACTGTCCA TACACCGTTT GGGCGGCATC GACTCCGATA GGCGGTGGTC 121 GACGTCTCAA TCGAGGCCAA ACATGGGTCA TCAATGCTCC GAGGGGAACT AAGATGGCAC 181 GTATATGGGG TCGTACTGGT TGCAACTTTA ATGCTGCAGG CAGAGGTACA TGTCAGACTG 241 GTGATTGTGG TGGAGTCTTA CAGTGTACCG GATGGGGCAA ACCCCCAAAC ACCCTAGCCG 301 AGTACGCCTT GGACCAGTTT AGCAACTTAG ATTTTTGGGA CATTTCTTTA GTCGATGGAT 361 TTAATATTCC AATGACTTTT GCCCCAACAA AACCTAGTGG AGGAAAATGT CACGCAATTC 421 ATTGCACGGC CAATATAAAT GGTGAATGTC CTCGCGCCCT TAAGGTACCT GGAGGATGTA 481 ACAACCC Predicted gene structure (within gDNA segment 44653 to 48950): Exon 1 46874 47128 ( 255 n); cDNA 119 373 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E209259+ 0.863 255 0.524 C PGS_C08HBa0235H18.1+_SGN-E209259+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 178 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 238 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 298 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 358 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 373 hqPGS_C08HBa0235H18.1+_SGN-E209259+ (46874 47128) ******************************************************************************** EST sequence 434 +strand 805 n (File: SGN-E260562+) 1 AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 61 TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 121 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 181 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 241 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 301 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 361 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 421 AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 481 GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC 541 CCAAGGTCCA TGTGGCCCTA CAGAGTTGTC CAAATTTTTC AAGAAAAGAT GTCCCGATGC 601 TTATAGCTAC CCACAAGACG ATCCTACAAG CACATTTACT TGCCCTGGTG GTAGTACAAA 661 CTATAGGGTT GTCTTTTGTC CTAATGGTGT TGCTGATCCA AATTTCCCCT TGGAGATGCC 721 CTGCAGTACT GATGAAGTGG CCNAGTGAAT TTGAGTTTTC TCATTTTAAT CGCCCTCATT 781 AGTCACTGAT CTCTACCGTA ATGAA Predicted gene structure (within gDNA segment 44483 to 51960): Exon 1 46874 47128 ( 255 n); cDNA 136 390 ( 255 n); score: 0.863 MATCH C08HBa0235H18.1+ SGN-E260562+ 0.863 255 0.317 C PGS_C08HBa0235H18.1+_SGN-E260562+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 195 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 255 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 315 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 375 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 390 hqPGS_C08HBa0235H18.1+_SGN-E260562+ (46874 47128) ******************************************************************************** EST sequence 438 +strand 646 n (File: SGN-E294134+) 1 AAACATGGCC TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG TGACTTACAC 61 TTATGCTGCC ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG CGGCGTCGAC 121 CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG 181 GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG 241 AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC 301 ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT 361 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC CTAGTGGAGG 421 GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTCCTG GTTCACTTAG 481 GGTACCCGGA GGATGTAACA ATCCTTGTAC CACGTTCGGA GGACAACAAT ATTGTTGCAC 541 ACAAGGTCCA TGTGGCCCTA CTGATTTGGC GAGATTTTTC AAACAAAGAT GTCCTGATGC 601 GTATAGCTAC CCACAAGATG ATCCTACTAG CACATTTACT TGCCCT Predicted gene structure (within gDNA segment 44546 to 50370): Exon 1 46874 47128 ( 255 n); cDNA 136 390 ( 255 n); score: 0.906 MATCH C08HBa0235H18.1+ SGN-E294134+ 0.906 255 0.395 C PGS_C08HBa0235H18.1+_SGN-E294134+ (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || |||||| |||| ||||| | || ||| |||||||||| | |||||||| |||||||||| TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA CCGAGGGGCA CTAAGATGGC 195 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| |||||||| | | |||||||| ||| |||||| |||||||||| | ||| |||| ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT GGTAGAGGTT CATGTCAGAC 255 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| ||||| |||| |||| ||||| ||||||||| ||||| |||| ||||| |||| TGGTGATTGT GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA ACACCCTGGC 315 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||||| |||||||||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 375 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 390 hqPGS_C08HBa0235H18.1+_SGN-E294134+ (46874 47128) ******************************************************************************** EST sequence 695 -strand 803 n (File: SGN-E540205-) 1 ACTTACACTT ATGCTGCCAC TTTCGAGGTA CGCAACAACT GTCCATACAC CGTCTGGGCG 61 GCGTCGACCN CAATAGGCGG TGGTCGACGT CTTGATCGAG GCCAAACATG GGTCATCAAT 121 GCACCGAGGG GCACTAAGAT GGCACGTATA TGGGGTCGTA CGAATTGCAA CTTTGATGGT 181 GCTGGTAGAG GTTCATGTCA GACTGGTGAT TGTGGTGGGG TCTTGCAATG TACCGGGTGG 241 GGCAAACCAC CAAACACCCT GGCCGAGTAC GCCTTGGACC AGTTTAGCAA CCTAGATTTC 301 TGGGACATTT CTTTAGTCGA TGGATTTAAT ATTCCAATGA CTTTCGCCCC GACCAATCCT 361 AGTGGAGGGA AATGCCATGC AATTCATTGT ACGGCTAATA TAAATGGTGA ATGTCCTGGT 421 TCACTTAGGG TACCCGGAGG ATGTAACAAT CCTTGTACCA CGTTCGGAGG ACAACAATAT 481 TGTTGCACAC AAGGTCCATG TGGCCCTACT GATTTGTCGA GATTTTTCAA ACAAAGATGT 541 CCTGATGCGT ATAGCTACCC ACAAGATGAT CCTACTAGCA CATTTACTTG CCCTAGTGGT 601 AGTACAAATT ATAGGGTTGT TTTTTGTCCT AATGGTGTTA CTAGCCCAAA TTTCCCCTTG 661 GAGATGCCCT CAAGTGATGA AGAGGCTAAG TAAAATTGAG TCACTTTCTT TTAAATTGCT 721 TGAAGTAGTC GAGTTATATA ATTGGCTTGT AATAAACCTA ATATAATTAC ATGAATAAAA 781 GTCACATCAT CACAAAAAAA AAA Predicted gene structure (within gDNA segment 45056 to 52450): Exon 1 46874 47128 ( 255 n); cDNA 84 338 ( 255 n); score: 0.906 PPA cDNA 792 803 MATCH C08HBa0235H18.1+ SGN-E540205- 0.906 255 0.318 C PGS_C08HBa0235H18.1+_SGN-E540205- (46874 47128) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || |||||| |||| ||||| | || ||| |||||||||| | |||||||| |||||||||| TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA CCGAGGGGCA CTAAGATGGC 143 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| |||||||| | | |||||||| ||| |||||| |||||||||| | ||| |||| ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT GGTAGAGGTT CATGTCAGAC 203 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| ||||| |||| |||| ||||| ||||||||| ||||| |||| ||||| |||| TGGTGATTGT GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA ACACCCTGGC 263 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||||| |||||||||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 323 ATTTAATCTG CAAAT 47128 ||||||| | | ||| ATTTAATATT CCAAT 338 hqPGS_C08HBa0235H18.1+_SGN-E540205- (46874 47128) ******************************************************************************** EST sequence 66 +strand 477 n (File: SGN-E202521+) 1 ATAGTTCCAC AAACATGGCC TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG 61 TGACTTACAC TTATGCTGCC ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG 121 CGGCGTCGAC CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA 181 ATGCACCGAG GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG 241 GTGCTGGTAG AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT 301 GGGGCAAACC ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT 361 TCTGGGACAT TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC 421 CTAGTGGAGG GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAATGGT GAATGTC Predicted gene structure (within gDNA segment 44446 to 48580): Exon 1 46874 47120 ( 247 n); cDNA 146 392 ( 247 n); score: 0.915 MATCH C08HBa0235H18.1+ SGN-E202521+ 0.915 247 0.518 C PGS_C08HBa0235H18.1+_SGN-E202521+ (46874 47120) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || |||||| |||| ||||| | || ||| |||||||||| | |||||||| |||||||||| TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA CCGAGGGGCA CTAAGATGGC 205 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| |||||||| | | |||||||| ||| |||||| |||||||||| | ||| |||| ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT GGTAGAGGTT CATGTCAGAC 265 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| ||||| |||| |||| ||||| ||||||||| ||||| |||| ||||| |||| TGGTGATTGT GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA ACACCCTGGC 325 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||||| |||||||||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 385 ATTTAAT 47120 ||||||| ATTTAAT 392 hqPGS_C08HBa0235H18.1+_SGN-E202521+ (46874 47120) ******************************************************************************** EST sequence 122 +strand 379 n (File: SGN-E337746+) 1 TGGCCTACTT GAGATCTTCT TTTGTTTTCT TCCTTCTTGC TTTTGTGACT TACACTTATG 61 CTGCCACTTT CGAGGTACGC AACAACTGTC CATACACCGT CTGGGCGGCG TCGACCCCAA 121 TAGGCGGTGG TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA CCGAGGGGCA 181 CTAAGATGGC ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT GGTAGAGGTT 241 CATGTCATAC TGGTGATTGT GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA 301 ACACCCTTGC CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT 361 TAGTCGATGG ATTTAATAT Predicted gene structure (within gDNA segment 44596 to 47750): Exon 1 46874 47120 ( 247 n); cDNA 131 377 ( 247 n); score: 0.907 MATCH C08HBa0235H18.1+ SGN-E337746+ 0.907 247 0.652 C PGS_C08HBa0235H18.1+_SGN-E337746+ (46874 47120) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || |||||| |||| ||||| | || ||| |||||||||| | |||||||| |||||||||| TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA CCGAGGGGCA CTAAGATGGC 190 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| |||||||| | | |||||||| ||| |||||| |||||||||| | ||| | || ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT GGTAGAGGTT CATGTCATAC 250 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| ||||| |||| |||| ||||| ||||||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA ACACCCTTGC 310 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||||| |||||||||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 370 ATTTAAT 47120 ||||||| ATTTAAT 377 hqPGS_C08HBa0235H18.1+_SGN-E337746+ (46874 47120) ******************************************************************************** EST sequence 139 +strand 419 n (File: SGN-E338892+) 1 TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA TTGAGGTACG 61 CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG GTCGACGTCT 121 CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG CACGTATATG 181 GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA CTGGTGATTG 241 TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG CCGAGTACGC 301 CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG GATTTAATAT 361 TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA TTCATTGCA Predicted gene structure (within gDNA segment 44723 to 48340): Exon 1 46874 47120 ( 247 n); cDNA 112 358 ( 247 n); score: 0.870 MATCH C08HBa0235H18.1+ SGN-E338892+ 0.870 247 0.589 C PGS_C08HBa0235H18.1+_SGN-E338892+ (46874 47120) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 171 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 231 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 291 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 351 ATTTAAT 47120 ||||||| ATTTAAT 358 hqPGS_C08HBa0235H18.1+_SGN-E338892+ (46874 47120) ******************************************************************************** EST sequence 142 +strand 386 n (File: SGN-E338707+) 1 CGGCACGAGG GCTACTTGAC ATCTTCTTTT GTTCTCTTCT TCCTTCTTTG TGTGACTTAT 61 ACTTATGCTG CCACTATTGA GGTACGCAAC AACTGTCCAT ACACCGTTTG GGCGGCATCG 121 ACTCCGATAG GCGGTGGTCG ACGTCTCAAT CGAGGCCAAA CATGGGTCAT CAATGCTCCG 181 AGGGGAACTA AGATGGCACG TATATGGGGT CGTACTGGTT GCAACTTTAA TGCTGCAGGC 241 AGAGGTACAT GTCAGACTGG TGATTGTGGT GGAGTCTTAC AGTGTACCGG ATGGGGCAAA 301 CCCCCAAACA CCCTAGCCGA GTACGCCTTG GACCAGTTTA GCAACTTAGA TTTTTGGGAC 361 ATTTCTTTAG TCGATGGATT TAATAT Predicted gene structure (within gDNA segment 44463 to 47750): Exon 1 46874 47120 ( 247 n); cDNA 138 384 ( 247 n); score: 0.870 MATCH C08HBa0235H18.1+ SGN-E338707+ 0.870 247 0.640 C PGS_C08HBa0235H18.1+_SGN-E338707+ (46874 47120) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 197 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 257 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 317 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 377 ATTTAAT 47120 ||||||| ATTTAAT 384 hqPGS_C08HBa0235H18.1+_SGN-E338707+ (46874 47120) ******************************************************************************** EST sequence 176 +strand 421 n (File: SGN-E205056+) 1 TTCCTTCTTT GTGTGACTTA TACTTATGCT GCCACTATTG AGGTACGCAA CAACTGTCCA 61 TACACCGTTT GGGCGGCATC GACTCCGATA GGCGGTGGTC GACGTCTCAA TCGAGGCCAA 121 ACATGGGTCA TCAATGCTCC GAGGGGAACT AAGATGGCAC GTATATGGGG TCGTACTGGT 181 TGCAACTTTA ATGCTGCAGG CAGAGGTACA TGTCAGACTG GTGATTGTGG TGGAGTCTTA 241 CAGTGTACCG GATGGGGCAA ACCCCCAAAC ACCCTAGCCG AGTACGCCTT GGACCAGTTT 301 AGCAACTTAG ATTTTTGGGA CATTTCTTTA GTCGATGGAT TTAATATTCC AATGACTTTT 361 GCCCCAACAA AACCTAGTGG AGGAAAATGT CACGCAATTC ATTGCACGGC CAATATAAAT 421 G Predicted gene structure (within gDNA segment 44853 to 48490): Exon 1 46874 47120 ( 247 n); cDNA 99 345 ( 247 n); score: 0.870 MATCH C08HBa0235H18.1+ SGN-E205056+ 0.870 247 0.587 C PGS_C08HBa0235H18.1+_SGN-E205056+ (46874 47120) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 158 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 218 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 278 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 338 ATTTAAT 47120 ||||||| ATTTAAT 345 hqPGS_C08HBa0235H18.1+_SGN-E205056+ (46874 47120) ******************************************************************************** EST sequence 177 +strand 395 n (File: SGN-E204939+) 1 TTGACATCTT CTTTTGTTCT CTTCTTCCTT CTTTGTGTGA CTTATACTTA TGCTGCCACT 61 ATTGAGGTAC GCAACAACTG TCCATACACC GTTTGGGCGG CATCGACTCC GATAGGCGGT 121 GGTCGACGTC TCAATCGAGG CCAAACATGG GTCATCAATG CTCCGAGGGG AACTAAGATG 181 GCACGTATAT GGGGTCGTAC TGGTTGCAAC TTTAATGCTG CAGGCAGAGG TACATGTCAG 241 ACTGGTGATT GTGGTGGAGT CTTACAGTGT ACCGGATGGG GCAAACCCCC AAACACCCTA 301 GCCGAGTACG CCTTGGACCA GTTTAGCAAC TTAGATTTTT GGGACATTTC TTTAGTCGAT 361 GGATTTAATA TTCCAATGAC TTTTGCCCCA ACAAA Predicted gene structure (within gDNA segment 44613 to 47990): Exon 1 46874 47120 ( 247 n); cDNA 123 369 ( 247 n); score: 0.870 MATCH C08HBa0235H18.1+ SGN-E204939+ 0.870 247 0.625 C PGS_C08HBa0235H18.1+_SGN-E204939+ (46874 47120) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 182 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 242 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 302 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 362 ATTTAAT 47120 ||||||| ATTTAAT 369 hqPGS_C08HBa0235H18.1+_SGN-E204939+ (46874 47120) ******************************************************************************** EST sequence 183 +strand 457 n (File: SGN-E205100+) 1 AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 61 TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 121 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 181 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 241 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 301 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 361 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 421 AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAAT Predicted gene structure (within gDNA segment 44483 to 48480): Exon 1 46874 47120 ( 247 n); cDNA 136 382 ( 247 n); score: 0.870 MATCH C08HBa0235H18.1+ SGN-E205100+ 0.870 247 0.540 C PGS_C08HBa0235H18.1+_SGN-E205100+ (46874 47120) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 195 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 255 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 315 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 375 ATTTAAT 47120 ||||||| ATTTAAT 382 hqPGS_C08HBa0235H18.1+_SGN-E205100+ (46874 47120) ******************************************************************************** EST sequence 191 +strand 349 n (File: SGN-E278209+) 1 TACACTTATG CTGCCACTTT CGAGGTACGC AACAACTGTC CATACACCGT CTGGGCGGCG 61 TCGACCCCAA TAGGCGGTGG TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA 121 CCGAGGGGCA CTAAGATGGC ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT 181 GGTAGAGGTT CATGTCAGAC TGGTGATTGT GGGGGGGGTC TTGCAATGTA CCGGGTGGGG 241 CAAACCACCA AACACCCTGG CCGAGTACGC CTTGGACCAG TTTAGCAACC TAGATTTCTG 301 GGACATTTCT TTAGTCGATG GATTTAATAT TCCAATGACT TTCGCCCCG Predicted gene structure (within gDNA segment 45096 to 47940): Exon 1 46874 47120 ( 247 n); cDNA 81 328 ( 248 n); score: 0.901 MATCH C08HBa0235H18.1+ SGN-E278209+ 0.901 247 0.708 C PGS_C08HBa0235H18.1+_SGN-E278209+ (46874 47120) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || |||||| |||| ||||| | || ||| |||||||||| | |||||||| |||||||||| TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA CCGAGGGGCA CTAAGATGGC 140 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| |||||||| | | |||||||| ||| |||||| |||||||||| | ||| |||| ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT GGTAGAGGTT CATGTCAGAC 200 TGGTGATTGT -GGTGGAGTC TTGCAGTGTA CCGGGTGGGG TAAACCGCCA AACACCTTGG 47052 |||||||||| || || ||| ||||| |||| |||||||||| ||||| ||| |||||| ||| TGGTGATTGT GGGGGGGGTC TTGCAATGTA CCGGGTGGGG CAAACCACCA AACACCCTGG 260 CCGAATACGC CTTGAACCAG TTTAACAACC TAGATTTCTG GGACATTTCT TTAGTCGATG 47112 |||| ||||| |||| ||||| |||| ||||| |||||||||| |||||||||| |||||||||| CCGAGTACGC CTTGGACCAG TTTAGCAACC TAGATTTCTG GGACATTTCT TTAGTCGATG 320 GATTTAAT 47120 |||||||| GATTTAAT 328 hqPGS_C08HBa0235H18.1+_SGN-E278209+ (46874 47120) ******************************************************************************** EST sequence 223 +strand 358 n (File: SGN-E336810+) 1 TTTTGTTCTC TTCTTCCTTC TTTGGGTGAC TTATACTTAT GCTGCCACTA TTGAGGTACG 61 CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG GTCGACGTCT 121 CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG CACGTATATG 181 GGGTCGTACT GGTTGCAACT TTAATGCTGC AAGCAGAGGT ACATGTCAGA CTGGTGATTG 241 TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG CCGAGTACGC 301 CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG GATTTAAT Predicted gene structure (within gDNA segment 44723 to 47730): Exon 1 46874 47120 ( 247 n); cDNA 112 358 ( 247 n); score: 0.866 MATCH C08HBa0235H18.1+ SGN-E336810+ 0.866 247 0.690 C PGS_C08HBa0235H18.1+_SGN-E336810+ (46874 47120) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 171 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| | |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA AGCAGAGGTA CATGTCAGAC 231 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 291 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 351 ATTTAAT 47120 ||||||| ATTTAAT 358 hqPGS_C08HBa0235H18.1+_SGN-E336810+ (46874 47120) ******************************************************************************** EST sequence 226 +strand 413 n (File: SGN-E336913+) 1 AGGCTTCTTT TGTTCTCTTC TTCCTTCTTT GTGTGACTTA TACTTATGCT GCCACTATTG 61 AGGTACGCAA CAACTGTCCA TACACCGTTT GGGCGGCATC GACTCCGATA GGCGGTGGTC 121 GACGTCTCAA TCGAGGCCAA ACATGGGTCA TCAATGCTCC GAGGGGAACT AAGATGGCAC 181 GTATATGGGG TCGTACTGGT TGCAACTTTA ATGCTGCAGG CAGAGGTACA TGTCAGACTG 241 GTGATTGTGG TGGAGTCTTA CAGTGTACCG GATGGGGCAA ACCCCCAAAC ACCCTAGCCG 301 AGTACGCCTT GGACCAGTTT AGCAACTTAG ATTTTTGGGA CATTTCTTTA GTCGATGGAT 361 TTAATATTCC AATGACTTTT GCCCCAACAA AACCTAGTGG AGGAAAATGT CAC Predicted gene structure (within gDNA segment 44653 to 48210): Exon 1 46874 47120 ( 247 n); cDNA 119 365 ( 247 n); score: 0.870 MATCH C08HBa0235H18.1+ SGN-E336913+ 0.870 247 0.598 C PGS_C08HBa0235H18.1+_SGN-E336913+ (46874 47120) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 178 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 238 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 298 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 358 ATTTAAT 47120 ||||||| ATTTAAT 365 hqPGS_C08HBa0235H18.1+_SGN-E336913+ (46874 47120) ******************************************************************************** EST sequence 230 +strand 447 n (File: SGN-E203940+) 1 TCTTCTTTTG CTCTCTTCTT CCTTGTTTGT GTGACTTATA CTTATGCTGC CACTATTGAA 61 GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA CTCCGATAGG CGGTGGTCGA 121 CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA GGGGAACTAA GATGGCACGT 181 ATATGGGGTC GTACTGGATG CAACTTTAAT GCTGCAGGCA GAGGTACATG TCAGACTGGT 241 GATTGCGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC CCCCAAACAC CCTAGCCGAG 301 TACACCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA TTTCTTTAGT CGATGGATTT 361 AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG GAAAATGTCA CGCAATTCAT 421 TGCACGGTCA ATATAAATGG TGAATGT Predicted gene structure (within gDNA segment 44673 to 48570): Exon 1 46874 47120 ( 247 n); cDNA 117 363 ( 247 n); score: 0.866 MATCH C08HBa0235H18.1+ SGN-E203940+ 0.866 247 0.553 C PGS_C08HBa0235H18.1+_SGN-E203940+ (46874 47120) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 176 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| ||||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GATGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 236 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 ||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGC GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 296 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| ||| || ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACACC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 356 ATTTAAT 47120 ||||||| ATTTAAT 363 hqPGS_C08HBa0235H18.1+_SGN-E203940+ (46874 47120) ******************************************************************************** EST sequence 248 +strand 433 n (File: SGN-E200039+) 1 TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC TTATGCTGCC 61 ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC TCCGATAGGC 121 GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG 181 ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT 241 CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC 301 CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC 361 GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG AAAATGTCAC 421 GCAATTCATT GCA Predicted gene structure (within gDNA segment 44583 to 48340): Exon 1 46874 47120 ( 247 n); cDNA 126 372 ( 247 n); score: 0.870 MATCH C08HBa0235H18.1+ SGN-E200039+ 0.870 247 0.570 C PGS_C08HBa0235H18.1+_SGN-E200039+ (46874 47120) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 185 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 245 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 305 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 365 ATTTAAT 47120 ||||||| ATTTAAT 372 hqPGS_C08HBa0235H18.1+_SGN-E200039+ (46874 47120) ******************************************************************************** EST sequence 263 +strand 426 n (File: SGN-E256174+) 1 TGACATCTTC TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 61 TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 121 GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 181 CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC ATGCAGAGGT ACATGTCAGA 241 CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 301 CCGAGTACGC CTTGGACCAG TTTAGCAACT TATATTTTTG GGACATTTCT TTAGTCGATG 361 GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 421 TTCATT Predicted gene structure (within gDNA segment 44623 to 48310): Exon 1 46874 47120 ( 247 n); cDNA 122 368 ( 247 n); score: 0.862 MATCH C08HBa0235H18.1+ SGN-E256174+ 0.862 247 0.580 C PGS_C08HBa0235H18.1+_SGN-E256174+ (46874 47120) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 181 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| | |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA TGCAGAGGTA CATGTCAGAC 241 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 301 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | | |||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT ATATTTTTGG GACATTTCTT TAGTCGATGG 361 ATTTAAT 47120 ||||||| ATTTAAT 368 hqPGS_C08HBa0235H18.1+_SGN-E256174+ (46874 47120) ******************************************************************************** EST sequence 315 +strand 431 n (File: SGN-E207769+) 1 AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 61 TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 121 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 181 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 241 AGGTACATGT CACACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 301 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 361 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 421 AAAATGTCAC G Predicted gene structure (within gDNA segment 44483 to 48220): Exon 1 46874 47120 ( 247 n); cDNA 136 382 ( 247 n); score: 0.866 MATCH C08HBa0235H18.1+ SGN-E207769+ 0.866 247 0.573 C PGS_C08HBa0235H18.1+_SGN-E207769+ (46874 47120) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 195 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| | || ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCACAC 255 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 315 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 375 ATTTAAT 47120 ||||||| ATTTAAT 382 hqPGS_C08HBa0235H18.1+_SGN-E207769+ (46874 47120) ******************************************************************************** EST sequence 331 +strand 425 n (File: SGN-E276456+) 1 TCTTCTTTTG TTCTCTTCTT CCTTCTTTGT GTGACTTATA CTTATGCTGC CACTATTGAG 61 GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA CTCCGATAGG CGGTGGTCGA 121 CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA GGGGAACTAA GATGGCACGT 181 ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA GAGGTACATG TCAGACTGGT 241 GATTGTGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC CCCCAAACAC CCTAGCCGAG 301 TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA TTTCTTTAGT CGATGGATTT 361 AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG GAAAATGTCA CGCAATTCAT 421 TGCAC Predicted gene structure (within gDNA segment 44673 to 48350): Exon 1 46874 47120 ( 247 n); cDNA 117 363 ( 247 n); score: 0.870 MATCH C08HBa0235H18.1+ SGN-E276456+ 0.870 247 0.581 C PGS_C08HBa0235H18.1+_SGN-E276456+ (46874 47120) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 176 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 236 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 296 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 356 ATTTAAT 47120 ||||||| ATTTAAT 363 hqPGS_C08HBa0235H18.1+_SGN-E276456+ (46874 47120) ******************************************************************************** EST sequence 333 +strand 467 n (File: SGN-E208115+) 1 ATAGTTCCAC AAACATGGCC TACTTGAGAT CTTCTTTTGT TTTCTTCCTT CTTGCTTTTG 61 TGACTTACAC TTATGCTGCC ACTTTCGAGG TACGCAACAA CTGTCCATAC ACCGTCTGGG 121 CGGCGTCGAC CCCAATAGGC GGTGGTCGAC GTCTTGATCG AGGCCAAACA TGGGTCATCA 181 ATGCACCGAG GGGCACTAAG ATGGCACGTA TATGGGGTCG TACGAATTGC AACTTTGATG 241 GTGCTGGTAG AGGTTCATGT CAGACTGGTG ATTGTGGTGG GGTCTTGCAA TGTACCGGGT 301 GGGGCAAACC ACCAAACACC CTGGCCGAGT ACGCCTTGGA CCAGTTTAGC AACCTAGATT 361 TCTGGGACAT TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTCGCC CCGACCAATC 421 CTAGTGGAGG GAAATGCCAT GCAATTCATT GTACGGCTAA TATAAAT Predicted gene structure (within gDNA segment 44446 to 48480): Exon 1 46874 47120 ( 247 n); cDNA 146 392 ( 247 n); score: 0.915 MATCH C08HBa0235H18.1+ SGN-E208115+ 0.915 247 0.529 C PGS_C08HBa0235H18.1+_SGN-E208115+ (46874 47120) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || |||||| |||| ||||| | || ||| |||||||||| | |||||||| |||||||||| TCGACGTCTT GATCGAGGCC AAACATGGGT CATCAATGCA CCGAGGGGCA CTAAGATGGC 205 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| |||||||| | | |||||||| ||| |||||| |||||||||| | ||| |||| ACGTATATGG GGTCGTACGA ATTGCAACTT TGATGGTGCT GGTAGAGGTT CATGTCAGAC 265 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| ||||| |||| |||| ||||| ||||||||| ||||| |||| ||||| |||| TGGTGATTGT GGTGGGGTCT TGCAATGTAC CGGGTGGGGC AAACCACCAA ACACCCTGGC 325 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||||| |||||||||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 385 ATTTAAT 47120 ||||||| ATTTAAT 392 hqPGS_C08HBa0235H18.1+_SGN-E208115+ (46874 47120) ******************************************************************************** EST sequence 342 +strand 429 n (File: SGN-E210426+) 1 TGACATCTTC TTTTGTTCTC TTCTTCCTTC TTTGTGTGAC TTATACTTAT GCTGCCACTA 61 TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 121 GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 181 CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 241 CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 301 CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG 361 GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 421 TTCATTGCA Predicted gene structure (within gDNA segment 44623 to 48340): Exon 1 46874 47120 ( 247 n); cDNA 122 368 ( 247 n); score: 0.870 MATCH C08HBa0235H18.1+ SGN-E210426+ 0.870 247 0.576 C PGS_C08HBa0235H18.1+_SGN-E210426+ (46874 47120) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 181 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 241 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 301 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 361 ATTTAAT 47120 ||||||| ATTTAAT 368 hqPGS_C08HBa0235H18.1+_SGN-E210426+ (46874 47120) ******************************************************************************** EST sequence 358 +strand 444 n (File: SGN-E208277+) 1 AAACATGGGC TACTTGACAT CTTCTTTTGT TCTCTTCTTC CTTCTTTGTG TGACTTATAC 61 TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 121 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 181 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 241 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 301 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 361 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 421 AAAATGTCAC GCAATTCATT GCAC Predicted gene structure (within gDNA segment 44483 to 48350): Exon 1 46874 47120 ( 247 n); cDNA 136 382 ( 247 n); score: 0.870 MATCH C08HBa0235H18.1+ SGN-E208277+ 0.870 247 0.556 C PGS_C08HBa0235H18.1+_SGN-E208277+ (46874 47120) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 195 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 255 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 315 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 375 ATTTAAT 47120 ||||||| ATTTAAT 382 hqPGS_C08HBa0235H18.1+_SGN-E208277+ (46874 47120) ******************************************************************************** EST sequence 394 +strand 390 n (File: SGN-E210135+) 1 CATCTTCTTT TGTTCTCTTC TTCCTTCTTT GTGTGACTTA TACTTATGCT GCCACTATTG 61 AGGTACGCAA CAACTGTCCA TACACCGTTT GGGCGGCATC GACTCCGATA GGCGGTGGTC 121 GACGTCTCAA TCGAGGCCAA ACATGGGTCA TCAATGCTCC GAGGGGAACT AAGATGGCAC 181 GTATATGGGG TCGTACTGGT TGCAACTTTA ATGCTGCAGG CAGAGGTACA TGTCAGACTG 241 GTGATTGTGG TGGAGTCTTA CAGTGTACCG GATGGGGCAA ACCCCCAAAC ACCCTAACCG 301 AGTACGCCTT GGACCAGCTT AGCAACTTAT ATTTTTGGGA CATTTCTTTA GTCGATGGAT 361 TTAATATTCC AATGACTTTT GCCCCAACAA Predicted gene structure (within gDNA segment 44653 to 47980): Exon 1 46874 47120 ( 247 n); cDNA 119 365 ( 247 n); score: 0.858 MATCH C08HBa0235H18.1+ SGN-E210135+ 0.858 247 0.633 C PGS_C08HBa0235H18.1+_SGN-E210135+ (46874 47120) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 178 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 238 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | | TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAAC 298 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| ||||| ||| |||| | | |||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGC TTAGCAACTT ATATTTTTGG GACATTTCTT TAGTCGATGG 358 ATTTAAT 47120 ||||||| ATTTAAT 365 hqPGS_C08HBa0235H18.1+_SGN-E210135+ (46874 47120) ******************************************************************************** EST sequence 399 +strand 418 n (File: SGN-E201442+) 1 TTGACATCTT CTTTTGTTCT CTTCTTCCTT CTTTGTGTGA CTTATACTTA TGCTGCCACT 61 ATTGAGGTAC GCAACAACTG TCCATACACC GTTTGGGCGG CATCGACTCC GATAGGCGGT 121 GGTCGACGTC TCAATCGAGG CCAAACATGG GTCATCAATG CTCCGAGGGG AACTAAGATG 181 GCACGTATAT GGGGTCGTAC TGGTTGCAAC TTTAATGCTG CAGGCAGAGG TACATGTCAG 241 ACTGGTGATT GTGGTGGAGT CTTACAGTGT ACCGGATGGG GCAAACCCCC AAACACCCTA 301 GCCGAGTACG CCTTGGACCA GTTTAGCAAC TTAGATTTTT GGGACATTTC TTTAGTCGAT 361 GGATTTAATA TTCCAATGAC TTTTGCCCCA ACAAAACCTA GTGGAGGAAA ATGTCACG Predicted gene structure (within gDNA segment 44613 to 48220): Exon 1 46874 47120 ( 247 n); cDNA 123 369 ( 247 n); score: 0.870 MATCH C08HBa0235H18.1+ SGN-E201442+ 0.870 247 0.591 C PGS_C08HBa0235H18.1+_SGN-E201442+ (46874 47120) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 182 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 242 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 302 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 362 ATTTAAT 47120 ||||||| ATTTAAT 369 hqPGS_C08HBa0235H18.1+_SGN-E201442+ (46874 47120) ******************************************************************************** EST sequence 409 +strand 410 n (File: SGN-E208827+) 1 TCTCTTCTTC CTTCTTTGTG TGACTTATAC TTATGCTGCC ACTATTGAGG TACGCAACAA 61 CTGTCCATAC ACCGTTTGGG CGGCATCGAC TCCGATAGGC GGTGGTCGAC GTCTCAATCG 121 AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG ATGGCACGTA TATGGGGTCG 181 TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT CAGACTGGTG ATTGTGGTGG 241 AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC CTAGCCGAGT ACGCCTTGGA 301 CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC GATGGATTTA ATATTCCAAT 361 GACTTTTGCC CCAACAAAAC CTAGTGGAGG AAAATGTCAC GCAATTCATT Predicted gene structure (within gDNA segment 44783 to 48310): Exon 1 46874 47120 ( 247 n); cDNA 106 352 ( 247 n); score: 0.870 MATCH C08HBa0235H18.1+ SGN-E208827+ 0.870 247 0.602 C PGS_C08HBa0235H18.1+_SGN-E208827+ (46874 47120) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 165 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 225 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 285 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 345 ATTTAAT 47120 ||||||| ATTTAAT 352 hqPGS_C08HBa0235H18.1+_SGN-E208827+ (46874 47120) ******************************************************************************** EST sequence 445 +strand 445 n (File: SGN-E200871+) 1 ACAAACATGG GCTACTTGAC ATCTTCTTTT GTTCTCTTCT TCCTTCTTTG TGTGACTTAT 61 ACTTATGCTG CCACTATTGA GGTACGCAAC AACTGTCCAT ACACCGTTTG GGCGGCATCG 121 ACTCCGATAG GCGGTGGTCG ACGTCTCAAT CGAGGCCAAA CATGGGTCAT CAATGCTCCG 181 AGGGGAACTA AGATGGCACG TATATGGGGT CGTACTGGTT GCAACTTTAA TGCTGCAGGC 241 AGAGGTACAT GTCAGACTGG TGATTGTGGT GGAGTCTTAC AGTGTACCGG ATGGGGCAAA 301 CCCCCAAACA CCCTAGCCGA GTACGCCTTG GACCAGTTTA GCAACTTAGA TTTTTGGGAC 361 ATTTCTTTAG TCGATGGATT TAATATTCCA ATGACTTTTG CCCCAACAAA ACCTAGTGGA 421 GGAAAATGTC ACGCAATTCA TTGCA Predicted gene structure (within gDNA segment 44463 to 48340): Exon 1 46874 47120 ( 247 n); cDNA 138 384 ( 247 n); score: 0.870 MATCH C08HBa0235H18.1+ SGN-E200871+ 0.870 247 0.555 C PGS_C08HBa0235H18.1+_SGN-E200871+ (46874 47120) Alignment (genomic DNA sequence = upper lines): TCAACGTCTC GATCAAGGCC AGACTTGGAC CATCAATGCA CTGAGGGGCA CTAAGATGGC 46933 || ||||||| ||| ||||| | || ||| ||||||||| | |||||| | |||||||||| TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 197 ACGTATATGG GGTCGTACTA AATGCAACTT TGACGGTGCT GGTAGAGGTT CTTGTGAGAC 46993 |||||||||| ||||||||| |||||||| | | | ||| || |||||| | ||| |||| ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA CATGTCAGAC 257 TGGTGATTGT GGTGGAGTCT TGCAGTGTAC CGGGTGGGGT AAACCGCCAA ACACCTTGGC 47053 |||||||||| |||||||||| | |||||||| ||| ||||| ||||| |||| ||||| | || TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTAGC 317 CGAATACGCC TTGAACCAGT TTAACAACCT AGATTTCTGG GACATTTCTT TAGTCGATGG 47113 ||| |||||| ||| |||||| ||| |||| | |||||| ||| |||||||||| |||||||||| CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 377 ATTTAAT 47120 ||||||| ATTTAAT 384 hqPGS_C08HBa0235H18.1+_SGN-E200871+ (46874 47120) ******************************************************************************** EST sequence 57 +strand 750 n (File: SGN-E263617+) 1 ACTTATGCTG CCACTATTGA GGTACGCAAC AACTGTCCAT ACACCGTTTG GGCGGCATCG 61 ACTCCGATAG GCGGTGGTCG ACGTCTCAAT CGAGGCCAAA CATGGGTCAT CAATGCTCCG 121 AGGGGAACTA AGATGGCACG TATATGGGGT CGTACTGGTT GCAACTTTAA TGCTGCAGGC 181 AGAGGTACAT GTCAGACTGG TGATTGTGGT GGAGTCTTAC AGTGTACCGG ATGGGGCAAA 241 CCCCCAAACA CCCTAGCCGA GTACGCCTTG GACCAGTTTA GCAACTTAGA TTTTTGGGAC 301 ATTTCTTTAG TCGATGGATT TAATATTCCA ATGACTTTTG CCCCAACAAA ACCTAGTGGA 361 GGAAAATGTC ACGCAATTCA TTGCACGGCC AATATAAATG GTGAATGTCC TCGCGCCCTT 421 AAGGTACCTG GAGGATGTAA CAACCCTTGT ACCACGTTTG GAGGACAACA ATATTGTTGC 481 ACCCAAGGTC CATGTGGCCC TACAGAGTTG TCCAAATTTT TCAAGAAAAG ATGTCCCGAT 541 GCTTATAGCT ACCCACAAGA CGATCCTACA AGCACATTTA CTTGCCCTGG TGGTAGTACA 601 AACTATAGGG TTGTCTTTTG TCCTAATGGT GTTGCTGATC CAAATTTCCC CTTGGAGATG 661 CCTGCAAGTA CTGATGAAGT GGCCAAGTGA ATTTGAGTTT CTTCATTTTA AATCGCCTNC 721 ATTAGTCAAC TGATCTCTAC CGTAATGAAA Predicted gene structure (within gDNA segment 45063 to 51990): Exon 1 46877 47128 ( 252 n); cDNA 81 332 ( 252 n); score: 0.865 MATCH C08HBa0235H18.1+ SGN-E263617+ 0.865 252 0.336 C PGS_C08HBa0235H18.1+_SGN-E263617+ (46877 47128) Alignment (genomic DNA sequence = upper lines): ACGTCTCGAT CAAGGCCAGA CTTGGACCAT CAATGCACTG AGGGGCACTA AGATGGCACG 46936 ||||||| || | |||||| | | ||| ||| |||||| | | ||||| |||| |||||||||| ACGTCTCAAT CGAGGCCAAA CATGGGTCAT CAATGCTCCG AGGGGAACTA AGATGGCACG 140 TATATGGGGT CGTACTAAAT GCAACTTTGA CGGTGCTGGT AGAGGTTCTT GTGAGACTGG 46996 |||||||||| |||||| | |||||||| | | ||| || |||||| | | || ||||||| TATATGGGGT CGTACTGGTT GCAACTTTAA TGCTGCAGGC AGAGGTACAT GTCAGACTGG 200 TGATTGTGGT GGAGTCTTGC AGTGTACCGG GTGGGGTAAA CCGCCAAACA CCTTGGCCGA 47056 |||||||||| |||||||| | |||||||||| ||||| ||| || ||||||| || | ||||| TGATTGTGGT GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAACA CCCTAGCCGA 260 ATACGCCTTG AACCAGTTTA ACAACCTAGA TTTCTGGGAC ATTTCTTTAG TCGATGGATT 47116 ||||||||| ||||||||| |||| |||| ||| |||||| |||||||||| |||||||||| GTACGCCTTG GACCAGTTTA GCAACTTAGA TTTTTGGGAC ATTTCTTTAG TCGATGGATT 320 TAATCTGCAA AT 47128 |||| | | | || TAATATTCCA AT 332 hqPGS_C08HBa0235H18.1+_SGN-E263617+ (46877 47128) ******************************************************************************** EST sequence 298 +strand 550 n (File: SGN-E256630+) 1 GCGACGTCTC AATCGAAGCC AAACATGGGT CATCAATGCT CCGAGGGGAA CTAAGATGGC 61 ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA AGCAGAGGTA CATGTCAGAC 121 TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA ACACCCTATC 181 CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT TAGTCGATGG 241 ATTTAATATT CCAATGACTT TTGCCCCAAC AAAACCTAGT GGAGGAAAAT GTCACGCAAT 301 TCATTGCACG GCCAATATAA ATGGTGAATG TCCTCGCGCC CTTAAGGTAC CTGGAGGATG 361 TAACAACCCT TGTACCACGT TTGGAGGACA ACAATATTGT TGCACCCAAA GTCCATGTGG 421 CCCTACAGAG TTGTCCAAAT TTTTCAAGAA AAGATGTCCC GATGCTTATA GCTACCCACA 481 AGACGATCCT ACAAGCACAT TTACTTGCCC TGGTGGTAGT ACAAACTATA GGGTTGTCTT 541 TTGTCCTAAT Predicted gene structure (within gDNA segment 45833 to 50760): Exon 1 46877 47128 ( 252 n); cDNA 4 255 ( 252 n); score: 0.853 MATCH C08HBa0235H18.1+ SGN-E256630+ 0.853 252 0.458 C PGS_C08HBa0235H18.1+_SGN-E256630+ (46877 47128) Alignment (genomic DNA sequence = upper lines): ACGTCTCGAT CAAGGCCAGA CTTGGACCAT CAATGCACTG AGGGGCACTA AGATGGCACG 46936 ||||||| || | | |||| | | ||| ||| |||||| | | ||||| |||| |||||||||| ACGTCTCAAT CGAAGCCAAA CATGGGTCAT CAATGCTCCG AGGGGAACTA AGATGGCACG 63 TATATGGGGT CGTACTAAAT GCAACTTTGA CGGTGCTGGT AGAGGTTCTT GTGAGACTGG 46996 |||||||||| |||||| | |||||||| | | ||| | |||||| | | || ||||||| TATATGGGGT CGTACTGGTT GCAACTTTAA TGCTGCAAGC AGAGGTACAT GTCAGACTGG 123 TGATTGTGGT GGAGTCTTGC AGTGTACCGG GTGGGGTAAA CCGCCAAACA CCTTGGCCGA 47056 |||||||||| |||||||| | |||||||||| ||||| ||| || ||||||| || | |||| TGATTGTGGT GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAACA CCCTATCCGA 183 ATACGCCTTG AACCAGTTTA ACAACCTAGA TTTCTGGGAC ATTTCTTTAG TCGATGGATT 47116 ||||||||| ||||||||| |||| |||| ||| |||||| |||||||||| |||||||||| GTACGCCTTG GACCAGTTTA GCAACTTAGA TTTTTGGGAC ATTTCTTTAG TCGATGGATT 243 TAATCTGCAA AT 47128 |||| | | | || TAATATTCCA AT 255 hqPGS_C08HBa0235H18.1+_SGN-E256630+ (46877 47128) ******************************************************************************** EST sequence 21 +strand 530 n (File: SGN-E336261+) 1 TTGAGGTACG CAACAACTGT CCATACACCG TTTGGGCGGC ATCGACTCCG ATAGGCGGTG 61 GTCGACGTCT CAATCGAGGC CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG 121 CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA 181 CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG 241 CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG 301 GATTTAATAT TCCAATGACT TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA 361 TTCATTGCAC GGCCAATATA AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT 421 GTAACAACCC TTGTACCACG TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG 481 GCCCTACAGA GTTGTCCAAA TTTTTCAAGA AAAGATGTCC CGATGCTTAT Predicted gene structure (within gDNA segment 45223 to 49950): Exon 1 46879 47128 ( 250 n); cDNA 67 316 ( 250 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E336261+ 0.864 250 0.472 C PGS_C08HBa0235H18.1+_SGN-E336261+ (46879 47128) Alignment (genomic DNA sequence = upper lines): GTCTCGATCA AGGCCAGACT TGGACCATCA ATGCACTGAG GGGCACTAAG ATGGCACGTA 46938 ||||| ||| |||||| || ||| ||||| |||| | ||| ||| |||||| |||||||||| GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG ATGGCACGTA 126 TATGGGGTCG TACTAAATGC AACTTTGACG GTGCTGGTAG AGGTTCTTGT GAGACTGGTG 46998 |||||||||| |||| ||| |||||| | | ||| || || |||| | ||| ||||||||| TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT CAGACTGGTG 186 ATTGTGGTGG AGTCTTGCAG TGTACCGGGT GGGGTAAACC GCCAAACACC TTGGCCGAAT 47058 |||||||||| |||||| ||| |||||||| | |||| ||||| ||||||||| | ||||| | ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC CTAGCCGAGT 246 ACGCCTTGAA CCAGTTTAAC AACCTAGATT TCTGGGACAT TTCTTTAGTC GATGGATTTA 47118 |||||||| | |||||||| | ||| |||||| | |||||||| |||||||||| |||||||||| ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC GATGGATTTA 306 ATCTGCAAAT 47128 || | | ||| ATATTCCAAT 316 hqPGS_C08HBa0235H18.1+_SGN-E336261+ (46879 47128) ******************************************************************************** EST sequence 33 +strand 709 n (File: SGN-E350897+) 1 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 61 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 121 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 181 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 241 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 301 AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 361 GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC 421 CCAAGGTCCA TGTGGCCCTA CAGAGTTGTC CAAATTTTTC AAGAAAAGAT GTCCCGATGC 481 TTATAGCTAC CCACAAGACG ATCCTACAAG CACATTTACT TGCCCCTGGT GGTAGTACAA 541 ACTATAGGGT TGTCTTTTGT CCTAATGGGT GTGCTGATCC CNAATTCCCC TTGAGATGCC 601 TGCAAGTACT GATGAAGTGG CCAAGTGAAA TTGNNAGTTC TCATTTTAAT CGCCTCATTA 661 GTCAACTGAT CTCTACCGTA ATGAAAATCT TTATAGCTCA GTTTTTTAA Predicted gene structure (within gDNA segment 45683 to 52200): Exon 1 46879 47128 ( 250 n); cDNA 21 270 ( 250 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E350897+ 0.864 250 0.353 C PGS_C08HBa0235H18.1+_SGN-E350897+ (46879 47128) Alignment (genomic DNA sequence = upper lines): GTCTCGATCA AGGCCAGACT TGGACCATCA ATGCACTGAG GGGCACTAAG ATGGCACGTA 46938 ||||| ||| |||||| || ||| ||||| |||| | ||| ||| |||||| |||||||||| GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG ATGGCACGTA 80 TATGGGGTCG TACTAAATGC AACTTTGACG GTGCTGGTAG AGGTTCTTGT GAGACTGGTG 46998 |||||||||| |||| ||| |||||| | | ||| || || |||| | ||| ||||||||| TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT CAGACTGGTG 140 ATTGTGGTGG AGTCTTGCAG TGTACCGGGT GGGGTAAACC GCCAAACACC TTGGCCGAAT 47058 |||||||||| |||||| ||| |||||||| | |||| ||||| ||||||||| | ||||| | ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC CTAGCCGAGT 200 ACGCCTTGAA CCAGTTTAAC AACCTAGATT TCTGGGACAT TTCTTTAGTC GATGGATTTA 47118 |||||||| | |||||||| | ||| |||||| | |||||||| |||||||||| |||||||||| ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC GATGGATTTA 260 ATCTGCAAAT 47128 || | | ||| ATATTCCAAT 270 hqPGS_C08HBa0235H18.1+_SGN-E350897+ (46879 47128) ******************************************************************************** EST sequence 83 +strand 391 n (File: SGN-E201143+) 1 AACTGTCCAT ACACCGCTTG GGCGGCATCG ACTCCGATAG GCGGTGGTCG ACGTCTCAAT 61 CGAGGCCAAA CATGGGTCAT CAATGCTCCG AGGGGAACTA AGATGGCACG TATATGGGGT 121 CGTACTGGTT GCAACTTTAA TGCTGCAGGC AGAGGTACAT GTCAGACTGG TGATTGTGGT 181 GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAACA CCCTAGCCGA GTACGCCTTG 241 GACCAGTTTA GCAACTTAGA TTTTTGGGAC ATTTCTTTAG TCGATGGATT TAATATTCCA 301 ATGACTTTTG CCCCAACAAA ACCTAGTGGA GGAAAATGTC ACGCAATTCA TTGCACGGCC 361 AATATAAATG GTGAATGTCC TCGCGCCCTT A Predicted gene structure (within gDNA segment 45363 to 48700): Exon 1 46879 47128 ( 250 n); cDNA 53 302 ( 250 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E201143+ 0.864 250 0.639 C PGS_C08HBa0235H18.1+_SGN-E201143+ (46879 47128) Alignment (genomic DNA sequence = upper lines): GTCTCGATCA AGGCCAGACT TGGACCATCA ATGCACTGAG GGGCACTAAG ATGGCACGTA 46938 ||||| ||| |||||| || ||| ||||| |||| | ||| ||| |||||| |||||||||| GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG ATGGCACGTA 112 TATGGGGTCG TACTAAATGC AACTTTGACG GTGCTGGTAG AGGTTCTTGT GAGACTGGTG 46998 |||||||||| |||| ||| |||||| | | ||| || || |||| | ||| ||||||||| TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT CAGACTGGTG 172 ATTGTGGTGG AGTCTTGCAG TGTACCGGGT GGGGTAAACC GCCAAACACC TTGGCCGAAT 47058 |||||||||| |||||| ||| |||||||| | |||| ||||| ||||||||| | ||||| | ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC CTAGCCGAGT 232 ACGCCTTGAA CCAGTTTAAC AACCTAGATT TCTGGGACAT TTCTTTAGTC GATGGATTTA 47118 |||||||| | |||||||| | ||| |||||| | |||||||| |||||||||| |||||||||| ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC GATGGATTTA 292 ATCTGCAAAT 47128 || | | ||| ATATTCCAAT 302 hqPGS_C08HBa0235H18.1+_SGN-E201143+ (46879 47128) ******************************************************************************** EST sequence 84 +strand 652 n (File: SGN-E213536+) 1 TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 61 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 121 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 181 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 241 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 301 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 361 AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 421 GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC 481 CCAAGGTCCA TGTGGCCCTA CAGAGTTGTC CAAATTTTTC AAGAAAAGAT GTCCCGATGC 541 TTATAGCTAC CCACAAGACG ATCCTACAAG CACATTTACT TGCCCTGGTG GTAGTACAAA 601 CTATANGGTT GTCTTTTGTC CTAATGGTGT TGCTGATCCA AATTTCCCTT GG Predicted gene structure (within gDNA segment 45083 to 51030): Exon 1 46879 47128 ( 250 n); cDNA 81 330 ( 250 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E213536+ 0.864 250 0.383 C PGS_C08HBa0235H18.1+_SGN-E213536+ (46879 47128) Alignment (genomic DNA sequence = upper lines): GTCTCGATCA AGGCCAGACT TGGACCATCA ATGCACTGAG GGGCACTAAG ATGGCACGTA 46938 ||||| ||| |||||| || ||| ||||| |||| | ||| ||| |||||| |||||||||| GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG ATGGCACGTA 140 TATGGGGTCG TACTAAATGC AACTTTGACG GTGCTGGTAG AGGTTCTTGT GAGACTGGTG 46998 |||||||||| |||| ||| |||||| | | ||| || || |||| | ||| ||||||||| TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT CAGACTGGTG 200 ATTGTGGTGG AGTCTTGCAG TGTACCGGGT GGGGTAAACC GCCAAACACC TTGGCCGAAT 47058 |||||||||| |||||| ||| |||||||| | |||| ||||| ||||||||| | ||||| | ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC CTAGCCGAGT 260 ACGCCTTGAA CCAGTTTAAC AACCTAGATT TCTGGGACAT TTCTTTAGTC GATGGATTTA 47118 |||||||| | |||||||| | ||| |||||| | |||||||| |||||||||| |||||||||| ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC GATGGATTTA 320 ATCTGCAAAT 47128 || | | ||| ATATTCCAAT 330 hqPGS_C08HBa0235H18.1+_SGN-E213536+ (46879 47128) ******************************************************************************** EST sequence 114 +strand 598 n (File: SGN-E253452+) 1 CTGCCACTAT TGAGGTACGC AACAACTGTC CATACACCGT TTGGGCGGCA TCGACTCCGA 61 TAGGCGGTGG TCGACGTCTC AATCGAGGCC AAACATGGGT CATCAATGCT CCGAGGGGAA 121 CTAAGATGGC ACGTATATGG GGTCGTACTG GTTGCAACTT TAATGCTGCA GGCAGAGGTA 181 CATGTCAGAC TGGTGATTGT GGTGGAGTCT TACAGTGTAC CGGATGGGGC AAACCCCCAA 241 ACACCCTAGC CGAGTACGCC TTGGACCAGT TTAGCAACTT AGATTTTTGG GACATTTCTT 301 TAGTCGATGG ATTTAATATT CCAATGACTT TTGCCCCAAC AAAACCTAGT GGAGGAAAAT 361 GTCACGCAAT TCATTGCACG GCCAATATAA ATGGTGAATG TCCTCGCGCC CTTAAGGTAC 421 CTGGAGGATG TAACAACCCT TGTACCACGT TTGGAGGACA ACAATATTGT TGCACCCAAG 481 GTCCATGTGG CCCTACAGAG TTGTCCAAAT TTTTCAAGAA AAGATGTCCC GATGCTTATA 541 GCTACCCACA AGACGATCCT ACAAGCACAT TTACTTGCCC TGGTGGTAGT ACAAACTA Predicted gene structure (within gDNA segment 45133 to 50540): Exon 1 46879 47128 ( 250 n); cDNA 76 325 ( 250 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E253452+ 0.864 250 0.418 C PGS_C08HBa0235H18.1+_SGN-E253452+ (46879 47128) Alignment (genomic DNA sequence = upper lines): GTCTCGATCA AGGCCAGACT TGGACCATCA ATGCACTGAG GGGCACTAAG ATGGCACGTA 46938 ||||| ||| |||||| || ||| ||||| |||| | ||| ||| |||||| |||||||||| GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG ATGGCACGTA 135 TATGGGGTCG TACTAAATGC AACTTTGACG GTGCTGGTAG AGGTTCTTGT GAGACTGGTG 46998 |||||||||| |||| ||| |||||| | | ||| || || |||| | ||| ||||||||| TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT CAGACTGGTG 195 ATTGTGGTGG AGTCTTGCAG TGTACCGGGT GGGGTAAACC GCCAAACACC TTGGCCGAAT 47058 |||||||||| |||||| ||| |||||||| | |||| ||||| ||||||||| | ||||| | ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC CTAGCCGAGT 255 ACGCCTTGAA CCAGTTTAAC AACCTAGATT TCTGGGACAT TTCTTTAGTC GATGGATTTA 47118 |||||||| | |||||||| | ||| |||||| | |||||||| |||||||||| |||||||||| ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC GATGGATTTA 315 ATCTGCAAAT 47128 || | | ||| ATATTCCAAT 325 hqPGS_C08HBa0235H18.1+_SGN-E253452+ (46879 47128) ******************************************************************************** EST sequence 136 +strand 418 n (File: SGN-E204875+) 1 CATCGACTCC GATAGGCGGT GGTCGACGTC TCAATCGAGG CCAAACATGG GTCATCAATG 61 CTCCGAGGGG AACTAAGATG GCACGTATAT GGGGTCGTAC TGGTTGCAAC TTTAATGCTG 121 CAGGCAGAGG TACATGTCAG ACTGGTGATT GTGGTGGAGT CTTACAGTGT ACCGGATGGG 181 GCAAACCCCC AAACACCCTA GCCGAGTACG CCTTGGACCA GTTTAGCAAC TTAGATTTTT 241 GGGACATTTC TTTAGTCGAT GGATTTAATA TTCCAATGAC TTTTGCCCCA ACAAAACCTA 301 GTGGAGGAAA ATGTCACGCA ATTCATTGCA CGGCCAATAT AAATGGTGAA TGTCCTCGCG 361 CCCTTAATGT ACCTGGAGGA TGTAACAACC CTTGTACCAC GTTTGGAGGA CAACAATA Predicted gene structure (within gDNA segment 45613 to 49220): Exon 1 46879 47128 ( 250 n); cDNA 28 277 ( 250 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E204875+ 0.864 250 0.598 C PGS_C08HBa0235H18.1+_SGN-E204875+ (46879 47128) Alignment (genomic DNA sequence = upper lines): GTCTCGATCA AGGCCAGACT TGGACCATCA ATGCACTGAG GGGCACTAAG ATGGCACGTA 46938 ||||| ||| |||||| || ||| ||||| |||| | ||| ||| |||||| |||||||||| GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG ATGGCACGTA 87 TATGGGGTCG TACTAAATGC AACTTTGACG GTGCTGGTAG AGGTTCTTGT GAGACTGGTG 46998 |||||||||| |||| ||| |||||| | | ||| || || |||| | ||| ||||||||| TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT CAGACTGGTG 147 ATTGTGGTGG AGTCTTGCAG TGTACCGGGT GGGGTAAACC GCCAAACACC TTGGCCGAAT 47058 |||||||||| |||||| ||| |||||||| | |||| ||||| ||||||||| | ||||| | ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC CTAGCCGAGT 207 ACGCCTTGAA CCAGTTTAAC AACCTAGATT TCTGGGACAT TTCTTTAGTC GATGGATTTA 47118 |||||||| | |||||||| | ||| |||||| | |||||||| |||||||||| |||||||||| ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC GATGGATTTA 267 ATCTGCAAAT 47128 || | | ||| ATATTCCAAT 277 hqPGS_C08HBa0235H18.1+_SGN-E204875+ (46879 47128) ******************************************************************************** EST sequence 153 +strand 595 n (File: SGN-E254383+) 1 GCCACTATTG AGGTACGCAA CAACTGTCCA TACACCGTTT GGGCGGCATC GACTCCGATA 61 GGCGGTGGTC GACGTCTCAA TCGAGGCCAA ACATGGGTCA TCAATGCTCC GAGGGGAACT 121 AAGATGGCAC GTATATGGGG TCGTACTGGT TGCAACTTTA ATGCTGCAGG CAGAGGTACA 181 TGTCAGACTG GTGATTGTGG TGGAGTCTTA CAGTGTACCG GATGGGGCAA ACCCCCAAAC 241 ACCCTAGCCG AGTACGCCTT GGACCAGTTT AGCAACTTAG ATTTTTGGGA CATTTCTTTA 301 GTCGATGGAT TTAATATTCC AATGACTTTT GCCCCAACAA AACCTAGTGG AGGAAAATGT 361 CACGCAATTC ATTGCACGGC CAATATAAAT GGTGAATGTC CTCGCGCCCT TAAGGTACCT 421 GGAGGATGTA ACAACCCTTG TACCACGTTT GGAGGACAAC AATATTGTTG CACCCAAGGT 481 CCATGTGGCC CTACAGAGTT GTCCAAATTT TTCAAGAAAA GATGTCCCGA TGCTTATAGC 541 TACCCACAAG ACGATCCTAC AAGCACATTT ACTTGCCCTG GTGGTAGTAC AAACT Predicted gene structure (within gDNA segment 45153 to 50530): Exon 1 46879 47128 ( 250 n); cDNA 74 323 ( 250 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E254383+ 0.864 250 0.420 C PGS_C08HBa0235H18.1+_SGN-E254383+ (46879 47128) Alignment (genomic DNA sequence = upper lines): GTCTCGATCA AGGCCAGACT TGGACCATCA ATGCACTGAG GGGCACTAAG ATGGCACGTA 46938 ||||| ||| |||||| || ||| ||||| |||| | ||| ||| |||||| |||||||||| GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG ATGGCACGTA 133 TATGGGGTCG TACTAAATGC AACTTTGACG GTGCTGGTAG AGGTTCTTGT GAGACTGGTG 46998 |||||||||| |||| ||| |||||| | | ||| || || |||| | ||| ||||||||| TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT CAGACTGGTG 193 ATTGTGGTGG AGTCTTGCAG TGTACCGGGT GGGGTAAACC GCCAAACACC TTGGCCGAAT 47058 |||||||||| |||||| ||| |||||||| | |||| ||||| ||||||||| | ||||| | ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC CTAGCCGAGT 253 ACGCCTTGAA CCAGTTTAAC AACCTAGATT TCTGGGACAT TTCTTTAGTC GATGGATTTA 47118 |||||||| | |||||||| | ||| |||||| | |||||||| |||||||||| |||||||||| ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC GATGGATTTA 313 ATCTGCAAAT 47128 || | | ||| ATATTCCAAT 323 hqPGS_C08HBa0235H18.1+_SGN-E254383+ (46879 47128) ******************************************************************************** EST sequence 155 +strand 457 n (File: SGN-E203662+) 1 TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 61 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 121 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 181 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 241 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 301 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 361 AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 421 GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTT Predicted gene structure (within gDNA segment 45083 to 49080): Exon 1 46879 47128 ( 250 n); cDNA 81 330 ( 250 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E203662+ 0.864 250 0.547 C PGS_C08HBa0235H18.1+_SGN-E203662+ (46879 47128) Alignment (genomic DNA sequence = upper lines): GTCTCGATCA AGGCCAGACT TGGACCATCA ATGCACTGAG GGGCACTAAG ATGGCACGTA 46938 ||||| ||| |||||| || ||| ||||| |||| | ||| ||| |||||| |||||||||| GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG ATGGCACGTA 140 TATGGGGTCG TACTAAATGC AACTTTGACG GTGCTGGTAG AGGTTCTTGT GAGACTGGTG 46998 |||||||||| |||| ||| |||||| | | ||| || || |||| | ||| ||||||||| TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT CAGACTGGTG 200 ATTGTGGTGG AGTCTTGCAG TGTACCGGGT GGGGTAAACC GCCAAACACC TTGGCCGAAT 47058 |||||||||| |||||| ||| |||||||| | |||| ||||| ||||||||| | ||||| | ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC CTAGCCGAGT 260 ACGCCTTGAA CCAGTTTAAC AACCTAGATT TCTGGGACAT TTCTTTAGTC GATGGATTTA 47118 |||||||| | |||||||| | ||| |||||| | |||||||| |||||||||| |||||||||| ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC GATGGATTTA 320 ATCTGCAAAT 47128 || | | ||| ATATTCCAAT 330 hqPGS_C08HBa0235H18.1+_SGN-E203662+ (46879 47128) ******************************************************************************** EST sequence 159 +strand 753 n (File: SGN-E212205+) 1 TATGCTGCCA CTATTGAGGT ACGCAACAAC TGTCCATACA CCGTTTGGGC GGCATCGACT 61 CCGATAGGCG GTGGTCGACG TCTCAATCGA GGCCAAACAT GGGTCATCAA TGCTCCGAGG 121 GGAACTAAGA TGGCACGTAT ATGGGGTCGT ACTGGTTGCA ACTTTAATGC TGCAGGCAGA 181 GGTACATGTC AGACTGGTGA TTGTGGTGGA GTCTTACAGT GTACCGGATG GGGCAAACCC 241 CCAAACACCC TAGCCGAGTA CGCCTTGGAC CAGTTTAGCA ACTTAGATTT TTGGGACATT 301 TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTTGCCC CAACAAAACC TAGTGGAGGA 361 AAATGTCACG CAATTCATTG CACGGCCAAT ATAAATGGTG AATGTCCTCG CGCCCTTAAG 421 GTACCTGGAG GATGTAACAA CCCTTGTACC ACGTTTGGAG GACAACAATA TTGTTGCACC 481 CAAGGTCCAT GTGGCCCTAC AGAGTTGTCC AAATTTTTCA AGAAAAGATG TCCCGATGCT 541 TATAGCTACC CACAAGACGA TCCTACAAGC ACATTTACTT GCCCNTGGTG GTAGTACAAA 601 CTATAGGGTT GTCTTTTGTC CTAATGGTGT TGCTGATCCA AATTTCCCCT TGGAGATGCC 661 TGCAAGTACT GATGAAGTGG CCAAGTGAAT TTGAGTTTCT TCATTTAAAT CGCCTCAATT 721 AGTCAACTGA TCTCTACCGT AATGAAAATC TTA Predicted gene structure (within gDNA segment 45093 to 52050): Exon 1 46879 47128 ( 250 n); cDNA 80 329 ( 250 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E212205+ 0.864 250 0.332 C PGS_C08HBa0235H18.1+_SGN-E212205+ (46879 47128) Alignment (genomic DNA sequence = upper lines): GTCTCGATCA AGGCCAGACT TGGACCATCA ATGCACTGAG GGGCACTAAG ATGGCACGTA 46938 ||||| ||| |||||| || ||| ||||| |||| | ||| ||| |||||| |||||||||| GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG ATGGCACGTA 139 TATGGGGTCG TACTAAATGC AACTTTGACG GTGCTGGTAG AGGTTCTTGT GAGACTGGTG 46998 |||||||||| |||| ||| |||||| | | ||| || || |||| | ||| ||||||||| TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT CAGACTGGTG 199 ATTGTGGTGG AGTCTTGCAG TGTACCGGGT GGGGTAAACC GCCAAACACC TTGGCCGAAT 47058 |||||||||| |||||| ||| |||||||| | |||| ||||| ||||||||| | ||||| | ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC CTAGCCGAGT 259 ACGCCTTGAA CCAGTTTAAC AACCTAGATT TCTGGGACAT TTCTTTAGTC GATGGATTTA 47118 |||||||| | |||||||| | ||| |||||| | |||||||| |||||||||| |||||||||| ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC GATGGATTTA 319 ATCTGCAAAT 47128 || | | ||| ATATTCCAAT 329 hqPGS_C08HBa0235H18.1+_SGN-E212205+ (46879 47128) ******************************************************************************** EST sequence 170 +strand 726 n (File: SGN-E213837+) 1 ATTGAGGTAC GCAACAACTG TCCATACACC GTTTGGGCGG CATCGACTCC GATAGGCGGT 61 GGTCGACGTC TCAATCGAGG CCAAACATGG GTCATCAATG CTCCGAGGGG AACTAAGATG 121 GCACGTATAT GGGGTCGTAC TGGTTGCAAC TTTAATGCTG CAGGCAGAGG TACATGTCAG 181 ACTGGTGATT GTGGTGGAGT CTTACAGTGT ACCGGATGGG GCAAACCCCC AAACACCCTA 241 GCCGAGTACG CCTTGGACCA GTTTAGCAAC TTAGATTTTT GGGACATTTC TTTAGTCGAT 301 GGATTTAATA TTCCAATGAC TTTTGCCCCA ACAAAACCTA GTGGAGGAAA ATGTCACGCA 361 ATTCATTGCA CGGCCAATAT AAATGGTGAA TGTCCTCGCG CCCTTAAGGT ACCTGGAGGA 421 TGTAACAACC CTTGTACCAC GTTTGGAGGA CAACAATATT GTTGCACCCA AGGTCCATGT 481 GGCCCTACAG AGTTGTCCAA ATTTTTCAAG AAAAGATGTC CCGATGCTTA TAGCTACCCA 541 CAAGACGATC CTACAAGCAC ATTTACTTGC CCTGGTGGTA GTACAAACTA TANGGTTGTC 601 TTTTGTCCTA ATGGTGTTGC TGATCCAAAT TTCCCCTTGG AGATGCCTGC AAGTACTGAT 661 GAAGTGGCCA AGTGAATTTG AGTTTCTTCA TTTTAAATCG CCTNCATTAG TCAACTGATC 721 TCTACC Predicted gene structure (within gDNA segment 45213 to 51900): Exon 1 46879 47128 ( 250 n); cDNA 68 317 ( 250 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E213837+ 0.864 250 0.344 C PGS_C08HBa0235H18.1+_SGN-E213837+ (46879 47128) Alignment (genomic DNA sequence = upper lines): GTCTCGATCA AGGCCAGACT TGGACCATCA ATGCACTGAG GGGCACTAAG ATGGCACGTA 46938 ||||| ||| |||||| || ||| ||||| |||| | ||| ||| |||||| |||||||||| GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG ATGGCACGTA 127 TATGGGGTCG TACTAAATGC AACTTTGACG GTGCTGGTAG AGGTTCTTGT GAGACTGGTG 46998 |||||||||| |||| ||| |||||| | | ||| || || |||| | ||| ||||||||| TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT CAGACTGGTG 187 ATTGTGGTGG AGTCTTGCAG TGTACCGGGT GGGGTAAACC GCCAAACACC TTGGCCGAAT 47058 |||||||||| |||||| ||| |||||||| | |||| ||||| ||||||||| | ||||| | ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC CTAGCCGAGT 247 ACGCCTTGAA CCAGTTTAAC AACCTAGATT TCTGGGACAT TTCTTTAGTC GATGGATTTA 47118 |||||||| | |||||||| | ||| |||||| | |||||||| |||||||||| |||||||||| ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC GATGGATTTA 307 ATCTGCAAAT 47128 || | | ||| ATATTCCAAT 317 hqPGS_C08HBa0235H18.1+_SGN-E213837+ (46879 47128) ******************************************************************************** EST sequence 179 +strand 643 n (File: SGN-E213897+) 1 CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA CTCCGATAGG 61 CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA GGGGAACTAA 121 GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA GAGGTACATG 181 TCAGACTGGT GATTGTGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC CCCCAAACAC 241 CCTAGCCGAG TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA TTTCTTTAGT 301 CGATGGATTT AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG GAAAATGTCA 361 CGCAATTCAT TGCACGGCCA ATATAAATGG TGAATGTCCT CGCGCCCTTA AGGTACCTGG 421 AGGATGTAAC AACCCTTGTA CCACGTTTGG AGGACAACAA TATTGTTGCA CCCAAGGTCC 481 ATGTGGCCCT ACAGAGTTGT CCAAATTTTT CAAGAAAAGA TGTCCCGATG CTTATAGCTA 541 CCCACAAGAC GATCCTACAA GCACATTTAC TTGCCCCTGG TGGTAGTACA AACTATANGG 601 NTGTCTTTTG TCCTAATGGT GTTGCTGATT CAAATTTCCC CTT Predicted gene structure (within gDNA segment 45173 to 51030): Exon 1 46879 47128 ( 250 n); cDNA 72 321 ( 250 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E213897+ 0.864 250 0.389 C PGS_C08HBa0235H18.1+_SGN-E213897+ (46879 47128) Alignment (genomic DNA sequence = upper lines): GTCTCGATCA AGGCCAGACT TGGACCATCA ATGCACTGAG GGGCACTAAG ATGGCACGTA 46938 ||||| ||| |||||| || ||| ||||| |||| | ||| ||| |||||| |||||||||| GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG ATGGCACGTA 131 TATGGGGTCG TACTAAATGC AACTTTGACG GTGCTGGTAG AGGTTCTTGT GAGACTGGTG 46998 |||||||||| |||| ||| |||||| | | ||| || || |||| | ||| ||||||||| TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT CAGACTGGTG 191 ATTGTGGTGG AGTCTTGCAG TGTACCGGGT GGGGTAAACC GCCAAACACC TTGGCCGAAT 47058 |||||||||| |||||| ||| |||||||| | |||| ||||| ||||||||| | ||||| | ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC CTAGCCGAGT 251 ACGCCTTGAA CCAGTTTAAC AACCTAGATT TCTGGGACAT TTCTTTAGTC GATGGATTTA 47118 |||||||| | |||||||| | ||| |||||| | |||||||| |||||||||| |||||||||| ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC GATGGATTTA 311 ATCTGCAAAT 47128 || | | ||| ATATTCCAAT 321 hqPGS_C08HBa0235H18.1+_SGN-E213897+ (46879 47128) ******************************************************************************** EST sequence 199 +strand 473 n (File: SGN-E334899+) 1 CCACTTTCGA GGTACGCAAC AACTGTCCAT ACACCGTCTG GGCGGCGTCG ACCCCAATAG 61 GCGGTGGTCG ACGTCTTGAT CGAGGCCAAA CATGGGTCAT CAATGCACCG AGGGGCACTA 121 AGATGGCACG TATATGGGGT CGTACGAATT GCAACTTTGA TGGTGCTGGT AGAGGTTCAT 181 GTCAGACTGG TGATTGTGGT GGGGTCTTGC AATGTACCGG GTGGGGCAAA CCACCAAACA 241 CCCTGGCCGA GTACGCCTTG GACCAGTTTA GCAACCTAGA TTTCTGGGAC ATTTCTTTAG 301 TCGATGGATT TAATATTCCA ATGACTTTCG CCCCGACCAA TCCTAGTGGA GGGAAATGCC 361 ATGCAATTCA TTGTACGGCT AATATAAATG GTGAATGTCC TGGTTCACTT AGGGTGCCCG 421 GAGGATGTAA CAATCCTTGT ACCACGTTCG GAGGACAACA ATATTGTTGC ACA Predicted gene structure (within gDNA segment 45226 to 49320): Exon 1 46879 47128 ( 250 n); cDNA 73 322 ( 250 n); score: 0.908 MATCH C08HBa0235H18.1+ SGN-E334899+ 0.908 250 0.529 C PGS_C08HBa0235H18.1+_SGN-E334899+ (46879 47128) Alignment (genomic DNA sequence = upper lines): GTCTCGATCA AGGCCAGACT TGGACCATCA ATGCACTGAG GGGCACTAAG ATGGCACGTA 46938 |||| |||| |||||| || ||| ||||| |||||| ||| |||||||||| |||||||||| GTCTTGATCG AGGCCAAACA TGGGTCATCA ATGCACCGAG GGGCACTAAG ATGGCACGTA 132 TATGGGGTCG TACTAAATGC AACTTTGACG GTGCTGGTAG AGGTTCTTGT GAGACTGGTG 46998 |||||||||| ||| || ||| |||||||| | |||||||||| |||||| ||| ||||||||| TATGGGGTCG TACGAATTGC AACTTTGATG GTGCTGGTAG AGGTTCATGT CAGACTGGTG 192 ATTGTGGTGG AGTCTTGCAG TGTACCGGGT GGGGTAAACC GCCAAACACC TTGGCCGAAT 47058 |||||||||| |||||||| |||||||||| |||| ||||| ||||||||| ||||||| | ATTGTGGTGG GGTCTTGCAA TGTACCGGGT GGGGCAAACC ACCAAACACC CTGGCCGAGT 252 ACGCCTTGAA CCAGTTTAAC AACCTAGATT TCTGGGACAT TTCTTTAGTC GATGGATTTA 47118 |||||||| | |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| ACGCCTTGGA CCAGTTTAGC AACCTAGATT TCTGGGACAT TTCTTTAGTC GATGGATTTA 312 ATCTGCAAAT 47128 || | | ||| ATATTCCAAT 322 hqPGS_C08HBa0235H18.1+_SGN-E334899+ (46879 47128) ******************************************************************************** EST sequence 211 +strand 455 n (File: SGN-E253792+) 1 AACTGTCCAT ACACCGTTTG GGCGGCATCG ACTCCGATAG GCGGTGGTCG ACGTCTCAAT 61 CGAGGCCAAA CATGGGTCAT CAATGCTCCG AGGGGAACTA AGATGGCACG TATATGGGGT 121 CGTACTGGTT GCAACTTTAA TGCTGCAGGC AGAGGTACAT GTCAGACTGG TGATTGTGGT 181 GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAACA CCCTAGCCGA GTACGCCTTG 241 GACCAGTTTA GCAACTTAGA TTTTTGGGAC ATTTCTTTAG TCGATGGATT TAATATTCCA 301 ATGACTTTTG CCCCAACAAA ACCTAGTGGA GGAAAATGTC ACGCAATTCA TTGCACGGCC 361 AATATAAATG GTGAATGTCC TCGCGCCCTT AAGGTACCTG GAGGATGTAA CAACCCTTGT 421 ACCACGTTTG GAGGACAACA ATATTGTTGC ACCCA Predicted gene structure (within gDNA segment 45363 to 49340): Exon 1 46879 47128 ( 250 n); cDNA 53 302 ( 250 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E253792+ 0.864 250 0.549 C PGS_C08HBa0235H18.1+_SGN-E253792+ (46879 47128) Alignment (genomic DNA sequence = upper lines): GTCTCGATCA AGGCCAGACT TGGACCATCA ATGCACTGAG GGGCACTAAG ATGGCACGTA 46938 ||||| ||| |||||| || ||| ||||| |||| | ||| ||| |||||| |||||||||| GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG ATGGCACGTA 112 TATGGGGTCG TACTAAATGC AACTTTGACG GTGCTGGTAG AGGTTCTTGT GAGACTGGTG 46998 |||||||||| |||| ||| |||||| | | ||| || || |||| | ||| ||||||||| TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT CAGACTGGTG 172 ATTGTGGTGG AGTCTTGCAG TGTACCGGGT GGGGTAAACC GCCAAACACC TTGGCCGAAT 47058 |||||||||| |||||| ||| |||||||| | |||| ||||| ||||||||| | ||||| | ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC CTAGCCGAGT 232 ACGCCTTGAA CCAGTTTAAC AACCTAGATT TCTGGGACAT TTCTTTAGTC GATGGATTTA 47118 |||||||| | |||||||| | ||| |||||| | |||||||| |||||||||| |||||||||| ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC GATGGATTTA 292 ATCTGCAAAT 47128 || | | ||| ATATTCCAAT 302 hqPGS_C08HBa0235H18.1+_SGN-E253792+ (46879 47128) ******************************************************************************** EST sequence 241 +strand 436 n (File: SGN-E206535+) 1 CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA CTCCGATAGG 61 CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA GGGGAACTAA 121 GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA GAGGTACATG 181 TCAGACTGGT GATTGTGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC CCCCAAACAC 241 CCTAGCCGAG TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA TTTCTTTAGT 301 CGATGGATTT AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG GAAAATGTCA 361 CGCAATTCAT TGCACGGCCA ATATAAATGG TGAATGTCCT CGCGCCCTTA AGGTACCTGG 421 AGGATGTAAC AACCCT Predicted gene structure (within gDNA segment 45173 to 48960): Exon 1 46879 47128 ( 250 n); cDNA 72 321 ( 250 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E206535+ 0.864 250 0.573 C PGS_C08HBa0235H18.1+_SGN-E206535+ (46879 47128) Alignment (genomic DNA sequence = upper lines): GTCTCGATCA AGGCCAGACT TGGACCATCA ATGCACTGAG GGGCACTAAG ATGGCACGTA 46938 ||||| ||| |||||| || ||| ||||| |||| | ||| ||| |||||| |||||||||| GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG ATGGCACGTA 131 TATGGGGTCG TACTAAATGC AACTTTGACG GTGCTGGTAG AGGTTCTTGT GAGACTGGTG 46998 |||||||||| |||| ||| |||||| | | ||| || || |||| | ||| ||||||||| TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT CAGACTGGTG 191 ATTGTGGTGG AGTCTTGCAG TGTACCGGGT GGGGTAAACC GCCAAACACC TTGGCCGAAT 47058 |||||||||| |||||| ||| |||||||| | |||| ||||| ||||||||| | ||||| | ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC CTAGCCGAGT 251 ACGCCTTGAA CCAGTTTAAC AACCTAGATT TCTGGGACAT TTCTTTAGTC GATGGATTTA 47118 |||||||| | |||||||| | ||| |||||| | |||||||| |||||||||| |||||||||| ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC GATGGATTTA 311 ATCTGCAAAT 47128 || | | ||| ATATTCCAAT 321 hqPGS_C08HBa0235H18.1+_SGN-E206535+ (46879 47128) ******************************************************************************** EST sequence 336 +strand 467 n (File: SGN-E266663+) 1 TATGCTGCCA CTATTGAGGT ACTTATACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 61 TCCTATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 121 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 181 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG CGTACCGGAT GGGGCAAACC 241 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 301 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 361 AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 421 AGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAAC Predicted gene structure (within gDNA segment 45083 to 49180): Exon 1 46879 47128 ( 250 n); cDNA 81 330 ( 250 n); score: 0.860 MATCH C08HBa0235H18.1+ SGN-E266663+ 0.860 250 0.535 C PGS_C08HBa0235H18.1+_SGN-E266663+ (46879 47128) Alignment (genomic DNA sequence = upper lines): GTCTCGATCA AGGCCAGACT TGGACCATCA ATGCACTGAG GGGCACTAAG ATGGCACGTA 46938 ||||| ||| |||||| || ||| ||||| |||| | ||| ||| |||||| |||||||||| GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG ATGGCACGTA 140 TATGGGGTCG TACTAAATGC AACTTTGACG GTGCTGGTAG AGGTTCTTGT GAGACTGGTG 46998 |||||||||| |||| ||| |||||| | | ||| || || |||| | ||| ||||||||| TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT CAGACTGGTG 200 ATTGTGGTGG AGTCTTGCAG TGTACCGGGT GGGGTAAACC GCCAAACACC TTGGCCGAAT 47058 |||||||||| |||||| ||| ||||||| | |||| ||||| ||||||||| | ||||| | ATTGTGGTGG AGTCTTACAG CGTACCGGAT GGGGCAAACC CCCAAACACC CTAGCCGAGT 260 ACGCCTTGAA CCAGTTTAAC AACCTAGATT TCTGGGACAT TTCTTTAGTC GATGGATTTA 47118 |||||||| | |||||||| | ||| |||||| | |||||||| |||||||||| |||||||||| ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC GATGGATTTA 320 ATCTGCAAAT 47128 || | | ||| ATATTCCAAT 330 hqPGS_C08HBa0235H18.1+_SGN-E266663+ (46879 47128) ******************************************************************************** EST sequence 391 +strand 645 n (File: SGN-E258673+) 1 AACTGTCCAT ACACCGTTTG GGCGGCATCG ACTCCGATAG GCGGTGGTCG ACGTCTCAAT 61 CGAGGCCAAA CATGGGTCAT CAATGCTCCG AGGGGAACTA AGATGGCACG TATATGGGGT 121 CGTACTGGTT GCAACTTTAA TGCTGCAGGC AGAGGTACAT GTCAGACTGG TGATTGTGGT 181 GGAGTCTTAC AGTGTACCGG ATGGGGCAAA CCCCCAAACA CCCTAGCCGA GTACGCCTTG 241 GACCAGTTTA GCAACTTAGA TTTTTGGGAC ATTTCTTTAG TCGATGGATT TAATATTCCA 301 ATGACTTTTG CCCCAACAAA ACCTAGTGGA GGAAAATGTC ACGCAATTCA TTGCACGGCC 361 AATATAAATG GTGAATGTCC TCGCGCCCTT AAGGTACCTG GAGGATGTAA CAACCCTTGT 421 ACCACGTTTG GAGGACAACA ATATTGTTGC ACCCAAGGTC CATGTGGCCC TACAGAGTTG 481 TCCAAATTTT TCAAGAAAAG ATGTCCCGAT GCTTATAGCT ACCCACAAGA CGATCCTACA 541 AGCACATTTA CTTGCCCTGG TGGTAGTACA AACTATAGGG TTGTTTTTTG TCCTAATGGT 601 GTTGCTGATC CAAATTTCCC CTTGGAGATG CCTGCAAGTA CTGAT Predicted gene structure (within gDNA segment 45363 to 51240): Exon 1 46879 47128 ( 250 n); cDNA 53 302 ( 250 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E258673+ 0.864 250 0.388 C PGS_C08HBa0235H18.1+_SGN-E258673+ (46879 47128) Alignment (genomic DNA sequence = upper lines): GTCTCGATCA AGGCCAGACT TGGACCATCA ATGCACTGAG GGGCACTAAG ATGGCACGTA 46938 ||||| ||| |||||| || ||| ||||| |||| | ||| ||| |||||| |||||||||| GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG ATGGCACGTA 112 TATGGGGTCG TACTAAATGC AACTTTGACG GTGCTGGTAG AGGTTCTTGT GAGACTGGTG 46998 |||||||||| |||| ||| |||||| | | ||| || || |||| | ||| ||||||||| TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT CAGACTGGTG 172 ATTGTGGTGG AGTCTTGCAG TGTACCGGGT GGGGTAAACC GCCAAACACC TTGGCCGAAT 47058 |||||||||| |||||| ||| |||||||| | |||| ||||| ||||||||| | ||||| | ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC CTAGCCGAGT 232 ACGCCTTGAA CCAGTTTAAC AACCTAGATT TCTGGGACAT TTCTTTAGTC GATGGATTTA 47118 |||||||| | |||||||| | ||| |||||| | |||||||| |||||||||| |||||||||| ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC GATGGATTTA 292 ATCTGCAAAT 47128 || | | ||| ATATTCCAAT 302 hqPGS_C08HBa0235H18.1+_SGN-E258673+ (46879 47128) ******************************************************************************** EST sequence 402 +strand 481 n (File: SGN-E311822+) 1 TTATGCTGCC ACTATTGAGG TACGCAACAA CTGTCCATAC ACCGTTTGGG CGGCATCGAC 61 TCCGATAGGC GGTGGTCGAC GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG 121 GGGAACTAAG ATGGCACGTA TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG 181 AGGTACATGT CAGACTGGTG ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC 241 CCCAAACACC CTAGCCGAGT ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT 301 TTCTTTAGTC GATGGATTTA ATATTCCAAT GACTTTTGCC CCAACAAAAC CTAGTGGAGG 361 AAAATGTCAC GCAATTCATT GCACGGCCAA TATAAATGGT GAATGTCCTC GCGCCCTTAA 421 GGTACCTGGA GGATGTAACA ACCCTTGTAC CACGTTTGGA GGACAACAAT ATTGTTGCAC 481 C Predicted gene structure (within gDNA segment 45083 to 49320): Exon 1 46879 47128 ( 250 n); cDNA 81 330 ( 250 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E311822+ 0.864 250 0.520 C PGS_C08HBa0235H18.1+_SGN-E311822+ (46879 47128) Alignment (genomic DNA sequence = upper lines): GTCTCGATCA AGGCCAGACT TGGACCATCA ATGCACTGAG GGGCACTAAG ATGGCACGTA 46938 ||||| ||| |||||| || ||| ||||| |||| | ||| ||| |||||| |||||||||| GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG ATGGCACGTA 140 TATGGGGTCG TACTAAATGC AACTTTGACG GTGCTGGTAG AGGTTCTTGT GAGACTGGTG 46998 |||||||||| |||| ||| |||||| | | ||| || || |||| | ||| ||||||||| TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT CAGACTGGTG 200 ATTGTGGTGG AGTCTTGCAG TGTACCGGGT GGGGTAAACC GCCAAACACC TTGGCCGAAT 47058 |||||||||| |||||| ||| |||||||| | |||| ||||| ||||||||| | ||||| | ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC CTAGCCGAGT 260 ACGCCTTGAA CCAGTTTAAC AACCTAGATT TCTGGGACAT TTCTTTAGTC GATGGATTTA 47118 |||||||| | |||||||| | ||| |||||| | |||||||| |||||||||| |||||||||| ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC GATGGATTTA 320 ATCTGCAAAT 47128 || | | ||| ATATTCCAAT 330 hqPGS_C08HBa0235H18.1+_SGN-E311822+ (46879 47128) ******************************************************************************** EST sequence 297 +strand 389 n (File: SGN-E207079+) 1 CACTATTGAG GTACGCAACA ACTGTCCATA CACCGTTTGG GCGGCATCGA CTCCGATAGG 61 CGGTGGTCGA CGTCTCAATC GAGGCCAAAC ATGGGTCATC AATGCTCCGA GGGGAACTAA 121 GATGGCACGT ATATGGGGTC GTACTGGTTG CAACTTTAAT GCTGCAGGCA GAGGTACATG 181 TCAGACTGGT GATTGTGGTG GAGTCTTACA GTGTACCGGA TGGGGCAAAC CCCCAAACAC 241 CCTAGCCGAG TACGCCTTGG ACCAGTTTAG CAACTTAGAT TTTTGGGACA TTTCTTTAGT 301 CGATGGATTT AATATTCCAA TGACTTTTGC CCCAACAAAA CCTAGTGGAG GAAAATGTCA 361 CGCAATTCAT TGCACGGCCA ATATAAATG Predicted gene structure (within gDNA segment 45173 to 48490): Exon 1 46879 47120 ( 242 n); cDNA 72 313 ( 242 n); score: 0.872 MATCH C08HBa0235H18.1+ SGN-E207079+ 0.872 242 0.622 C PGS_C08HBa0235H18.1+_SGN-E207079+ (46879 47120) Alignment (genomic DNA sequence = upper lines): GTCTCGATCA AGGCCAGACT TGGACCATCA ATGCACTGAG GGGCACTAAG ATGGCACGTA 46938 ||||| ||| |||||| || ||| ||||| |||| | ||| ||| |||||| |||||||||| GTCTCAATCG AGGCCAAACA TGGGTCATCA ATGCTCCGAG GGGAACTAAG ATGGCACGTA 131 TATGGGGTCG TACTAAATGC AACTTTGACG GTGCTGGTAG AGGTTCTTGT GAGACTGGTG 46998 |||||||||| |||| ||| |||||| | | ||| || || |||| | ||| ||||||||| TATGGGGTCG TACTGGTTGC AACTTTAATG CTGCAGGCAG AGGTACATGT CAGACTGGTG 191 ATTGTGGTGG AGTCTTGCAG TGTACCGGGT GGGGTAAACC GCCAAACACC TTGGCCGAAT 47058 |||||||||| |||||| ||| |||||||| | |||| ||||| ||||||||| | ||||| | ATTGTGGTGG AGTCTTACAG TGTACCGGAT GGGGCAAACC CCCAAACACC CTAGCCGAGT 251 ACGCCTTGAA CCAGTTTAAC AACCTAGATT TCTGGGACAT TTCTTTAGTC GATGGATTTA 47118 |||||||| | |||||||| | ||| |||||| | |||||||| |||||||||| |||||||||| ACGCCTTGGA CCAGTTTAGC AACTTAGATT TTTGGGACAT TTCTTTAGTC GATGGATTTA 311 AT 47120 || AT 313 hqPGS_C08HBa0235H18.1+_SGN-E207079+ (46879 47120) ******************************************************************************** EST sequence 44 +strand 713 n (File: SGN-E210944+) 1 TCAATCGAGG CCAAACATGG GTCATCAATG CTCCGAGGGG AACTAAGATG GCACGTATAT 61 GGGGTCGTAC TGGTTGCAAC TTTAATGCTG CAGGCAGAGG TACATGTCAG ACTGGTGATT 121 GTGGTGGAGT CTTACAGTGT ACCGGATGGG GCAAACCCCC AAACACCCTA GCCGAGTACG 181 CCTTGGACCA GTTTAGCAAC TTAGATTTTT GGGACATTTC TTTAGTCGAT GGATTTAATA 241 TTCCAATGAC TTTTGCCCCA ACAAAACCTA GTGGAGGAAA ATGTCACGCA ATTCATTGCA 301 CGGCCAATAT AAATGGTGAA TGTCCTCGCG CCCTTAAGGT ACCTGGAGGA TGTAACAACC 361 CTTGTACCAC GTTTGGAGGA CAACAATATT GTTGCACCCA AGGTCCATGT GGCCCTACAG 421 AGTTGTCCAA ATTTTTCAAG AAAAGATGTC CCGATGCTTA TAGCTACCCA CAAGACGATC 481 CTACAAGCAC ATTTACTTGC CCTGGTGGTA GTACAAACTA TAGGGTTGTC TTTTGTCCTA 541 ATGGTGTTGC TGATCCAAAT TTCCCCTTGG AGATGCCTGC AAGTACTGAT GAAGTGGCCA 601 AGTGAATTTG AGTTTCTTCA TTTTAAATCG CCTCAATTAG TCAACTGATC TCTACCGTAA 661 TGAAAAATCT TAATAGCTCA GTTTTTTAAA TATTCACTTT TACTTTATTG ATA Predicted gene structure (within gDNA segment 45913 to 52470): Exon 1 46882 47128 ( 247 n); cDNA 1 247 ( 247 n); score: 0.862 MATCH C08HBa0235H18.1+ SGN-E210944+ 0.862 247 0.346 C PGS_C08HBa0235H18.1+_SGN-E210944+ (46882 47128) Alignment (genomic DNA sequence = upper lines): TCGATCAAGG CCAGACTTGG ACCATCAATG CACTGAGGGG CACTAAGATG GCACGTATAT 46941 || ||| ||| ||| || ||| |||||||| | | |||||| ||||||||| |||||||||| TCAATCGAGG CCAAACATGG GTCATCAATG CTCCGAGGGG AACTAAGATG GCACGTATAT 60 GGGGTCGTAC TAAATGCAAC TTTGACGGTG CTGGTAGAGG TTCTTGTGAG ACTGGTGATT 47001 |||||||||| | |||||| ||| | | || | || ||||| | | ||| || |||||||||| GGGGTCGTAC TGGTTGCAAC TTTAATGCTG CAGGCAGAGG TACATGTCAG ACTGGTGATT 120 GTGGTGGAGT CTTGCAGTGT ACCGGGTGGG GTAAACCGCC AAACACCTTG GCCGAATACG 47061 |||||||||| ||| |||||| ||||| |||| | ||||| || ||||||| | ||||| |||| GTGGTGGAGT CTTACAGTGT ACCGGATGGG GCAAACCCCC AAACACCCTA GCCGAGTACG 180 CCTTGAACCA GTTTAACAAC CTAGATTTCT GGGACATTTC TTTAGTCGAT GGATTTAATC 47121 ||||| |||| ||||| |||| ||||||| | |||||||||| |||||||||| ||||||||| CCTTGGACCA GTTTAGCAAC TTAGATTTTT GGGACATTTC TTTAGTCGAT GGATTTAATA 240 TGCAAAT 47128 | | ||| TTCCAAT 247 hqPGS_C08HBa0235H18.1+_SGN-E210944+ (46882 47128) ******************************************************************************** EST sequence 186 +strand 390 n (File: SGN-E205109+) 1 TCAATAAAGG CCAATCATGG GTCATCAATG CTCCGAGGGG AACTAAGATG GCACGTATAT 61 GGGGTCGTAC TGGTTGCAAC TTTAATGCTG CAGGCAGAGG TACATGTCAG ACTGGTGATT 121 GTGGTGGAGT CTTACAGTGT ACCGGATGGG GCAAACCCCC AAACACCCTA GCCGAGTACG 181 CCTTGGACCA GTTTAGCAAC TTAGATTTTT GGGACATTTC TTTAGTCGAT GGATTTAATA 241 TTCCAATGAC TTTTGCCCCA ACAAAACCTA GTGGAGGAAA ATGTCACGCA ATTCATTGCA 301 CGGCCAATAT AAATGGTGAA TGTACTCGCG CCCTTAATGT ACCTGGAGGA TGTAACAACC 361 CTTGTACCAC GTTTGGAGGA CAACAATATT Predicted gene structure (within gDNA segment 45913 to 49240): Exon 1 46882 47128 ( 247 n); cDNA 1 247 ( 247 n); score: 0.858 MATCH C08HBa0235H18.1+ SGN-E205109+ 0.858 247 0.633 C PGS_C08HBa0235H18.1+_SGN-E205109+ (46882 47128) Alignment (genomic DNA sequence = upper lines): TCGATCAAGG CCAGACTTGG ACCATCAATG CACTGAGGGG CACTAAGATG GCACGTATAT 46941 || || |||| ||| | ||| |||||||| | | |||||| ||||||||| |||||||||| TCAATAAAGG CCAATCATGG GTCATCAATG CTCCGAGGGG AACTAAGATG GCACGTATAT 60 GGGGTCGTAC TAAATGCAAC TTTGACGGTG CTGGTAGAGG TTCTTGTGAG ACTGGTGATT 47001 |||||||||| | |||||| ||| | | || | || ||||| | | ||| || |||||||||| GGGGTCGTAC TGGTTGCAAC TTTAATGCTG CAGGCAGAGG TACATGTCAG ACTGGTGATT 120 GTGGTGGAGT CTTGCAGTGT ACCGGGTGGG GTAAACCGCC AAACACCTTG GCCGAATACG 47061 |||||||||| ||| |||||| ||||| |||| | ||||| || ||||||| | ||||| |||| GTGGTGGAGT CTTACAGTGT ACCGGATGGG GCAAACCCCC AAACACCCTA GCCGAGTACG 180 CCTTGAACCA GTTTAACAAC CTAGATTTCT GGGACATTTC TTTAGTCGAT GGATTTAATC 47121 ||||| |||| ||||| |||| ||||||| | |||||||||| |||||||||| ||||||||| CCTTGGACCA GTTTAGCAAC TTAGATTTTT GGGACATTTC TTTAGTCGAT GGATTTAATA 240 TGCAAAT 47128 | | ||| TTCCAAT 247 hqPGS_C08HBa0235H18.1+_SGN-E205109+ (46882 47128) ******************************************************************************** EST sequence 14 +strand 577 n (File: SGN-E211610+) 1 CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG CACGTATATG GGGTCGTACT 61 GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA CTGGTGATTG TGGTGGAGTC 121 TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG CCGAGTACGC CTTGGACCAG 181 TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG GATTTAATAT TCCAATGACT 241 TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA TTCATTGCAC GGCCAATATA 301 AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT GTAACAACCC TTGTACCACG 361 TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG GCCCTACAGA GTTGTCCAAA 421 TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC AAGACGATCC TACAAGCACA 481 TTTACTTGCC CTGGTGGTAG TACAAACTAT AAGGTTGTCT TTTGTCCTAA TGGTGTTGCT 541 GATCCAAATT TCCCCTTGGA GATGCCTGCA AGTACTG Predicted gene structure (within gDNA segment 46023 to 51220): Exon 1 46893 47128 ( 236 n); cDNA 1 236 ( 236 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E211610+ 0.864 236 0.409 C PGS_C08HBa0235H18.1+_SGN-E211610+ (46893 47128) Alignment (genomic DNA sequence = upper lines): CAGACTTGGA CCATCAATGC ACTGAGGGGC ACTAAGATGG CACGTATATG GGGTCGTACT 46952 || || ||| ||||||||| | |||||| |||||||||| |||||||||| |||||||||| CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG CACGTATATG GGGTCGTACT 60 AAATGCAACT TTGACGGTGC TGGTAGAGGT TCTTGTGAGA CTGGTGATTG TGGTGGAGTC 47012 ||||||| || | | ||| || |||||| | ||| ||| |||||||||| |||||||||| GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA CTGGTGATTG TGGTGGAGTC 120 TTGCAGTGTA CCGGGTGGGG TAAACCGCCA AACACCTTGG CCGAATACGC CTTGAACCAG 47072 || ||||||| |||| ||||| ||||| ||| |||||| | | |||| ||||| |||| ||||| TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG CCGAGTACGC CTTGGACCAG 180 TTTAACAACC TAGATTTCTG GGACATTTCT TTAGTCGATG GATTTAATCT GCAAAT 47128 |||| |||| ||||||| || |||||||||| |||||||||| |||||||| | | ||| TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG GATTTAATAT TCCAAT 236 hqPGS_C08HBa0235H18.1+_SGN-E211610+ (46893 47128) ******************************************************************************** EST sequence 146 +strand 511 n (File: SGN-E204787+) 1 CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG CACGTATATG GGGTCGTACT 61 GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA CTGGTGATTG TGGTGGAGTC 121 TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG CCGAGTACGC CTTGGACCAG 181 TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG GATTTAATAT TCCAATGACT 241 TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA TTCATTGCAC GGCCAATATA 301 AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT GTAACAACCC TTGTACCACG 361 TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG GCCCTACAGA GTTGTCCAAA 421 TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC AAGACGATCC TACAAGCACA 481 TTTACTTGCC CTGGTGGTAG TACAAACTAT A Predicted gene structure (within gDNA segment 46023 to 50560): Exon 1 46893 47128 ( 236 n); cDNA 1 236 ( 236 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E204787+ 0.864 236 0.462 C PGS_C08HBa0235H18.1+_SGN-E204787+ (46893 47128) Alignment (genomic DNA sequence = upper lines): CAGACTTGGA CCATCAATGC ACTGAGGGGC ACTAAGATGG CACGTATATG GGGTCGTACT 46952 || || ||| ||||||||| | |||||| |||||||||| |||||||||| |||||||||| CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG CACGTATATG GGGTCGTACT 60 AAATGCAACT TTGACGGTGC TGGTAGAGGT TCTTGTGAGA CTGGTGATTG TGGTGGAGTC 47012 ||||||| || | | ||| || |||||| | ||| ||| |||||||||| |||||||||| GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA CTGGTGATTG TGGTGGAGTC 120 TTGCAGTGTA CCGGGTGGGG TAAACCGCCA AACACCTTGG CCGAATACGC CTTGAACCAG 47072 || ||||||| |||| ||||| ||||| ||| |||||| | | |||| ||||| |||| ||||| TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG CCGAGTACGC CTTGGACCAG 180 TTTAACAACC TAGATTTCTG GGACATTTCT TTAGTCGATG GATTTAATCT GCAAAT 47128 |||| |||| ||||||| || |||||||||| |||||||||| |||||||| | | ||| TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG GATTTAATAT TCCAAT 236 hqPGS_C08HBa0235H18.1+_SGN-E204787+ (46893 47128) ******************************************************************************** EST sequence 221 +strand 697 n (File: SGN-E375347+) 1 CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG CACGTATATG GGGTCGTACT 61 GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA CTGGTGATTG TGGTGGAGTC 121 TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG CCGAGTACGC CTTGGACCAG 181 TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG GATTTAATAT TCCAATGACT 241 TTTGCCCCAA CAAAACCTAG TGGAGGAAAA TGTCACGCAA TTCATTGCAC GGCCAATATA 301 AATGGTGAAT GTCCTCGCGC CCTTAAGGTA CCTGGAGGAT GTAACAACCC TTGTACCACG 361 TTTGGAGGAC AACAATATTG TTGCACCCAA GGTCCATGTG GCCCTACAGA GTTGTCCAAA 421 TTTTTCAAGA AAAGATGTCC CGATGCTTAT AGCTACCCAC AAGACGATCC TACAAGCACA 481 TTTACTTGCC CTGGTGGTAG TACAAACTAT AGGGTTGTCT TTTGTCCTAA TGGTGTTGCT 541 GATCCAAATT TCCCCTTGGA GATGCCTGCA AGTACTGATG AAGTGGCCAA GTGAATTTGA 601 GTTTCTTCAT TTTAAATCGC CTCAATTAGT CAACTGATCT CTACCGTAAT GAAAAATCTT 661 AATAGCTCAG TTTTTTAAAT ATTCACTTTT ACTTTAT Predicted gene structure (within gDNA segment 46023 to 52420): Exon 1 46893 47128 ( 236 n); cDNA 1 236 ( 236 n); score: 0.864 MATCH C08HBa0235H18.1+ SGN-E375347+ 0.864 236 0.339 C PGS_C08HBa0235H18.1+_SGN-E375347+ (46893 47128) Alignment (genomic DNA sequence = upper lines): CAGACTTGGA CCATCAATGC ACTGAGGGGC ACTAAGATGG CACGTATATG GGGTCGTACT 46952 || || ||| ||||||||| | |||||| |||||||||| |||||||||| |||||||||| CAAACATGGG TCATCAATGC TCCGAGGGGA ACTAAGATGG CACGTATATG GGGTCGTACT 60 AAATGCAACT TTGACGGTGC TGGTAGAGGT TCTTGTGAGA CTGGTGATTG TGGTGGAGTC 47012 ||||||| || | | ||| || |||||| | ||| ||| |||||||||| |||||||||| GGTTGCAACT TTAATGCTGC AGGCAGAGGT ACATGTCAGA CTGGTGATTG TGGTGGAGTC 120 TTGCAGTGTA CCGGGTGGGG TAAACCGCCA AACACCTTGG CCGAATACGC CTTGAACCAG 47072 || ||||||| |||| ||||| ||||| ||| |||||| | | |||| ||||| |||| ||||| TTACAGTGTA CCGGATGGGG CAAACCCCCA AACACCCTAG CCGAGTACGC CTTGGACCAG 180 TTTAACAACC TAGATTTCTG GGACATTTCT TTAGTCGATG GATTTAATCT GCAAAT 47128 |||| |||| ||||||| || |||||||||| |||||||||| |||||||| | | ||| TTTAGCAACT TAGATTTTTG GGACATTTCT TTAGTCGATG GATTTAATAT TCCAAT 236 hqPGS_C08HBa0235H18.1+_SGN-E375347+ (46893 47128) ******************************************************************************** EST sequence 228 +strand 672 n (File: SGN-E352685+) 1 GGTCATCAAT GCACCGAGGG GCACTAAGAT GGCACGTATA TGGGGTCGTA CGAATTGCAA 61 CTTTGATGGT GCTGGTAGAG GTTCATGTCA GACTGGTGAT TGTGGTGGGG TCTTGCAATG 121 TACCGGGTGG GGCAAACCAC CAAACACCCT GGCCGAGTAC GCCTTGGACC AGTTTAGCAA 181 CCTAGATTTC TGGGACATTT CTTTAGTCGA TGGATTTAAT ATTCCAATGA CTTTCGCCCC 241 GACCAATCCT AGTGGAGGGA AATGCCATGC AATTCATTGT ACGGCTAATA TAAATGGTGA 301 ATGTCCTGGT TCACTTAGGG TACCCGGAGG ATGTAACAAT CCTTGTACCA CGTTCGGAGG 361 ACAACAATAT TGTTGCACAC AAGGTCCATG TGGCCCTACT GATTTGTCGA GATTTTTCAA 421 ACAAAGATGT CCTGATGCGT ATAGCTACCC ACAAGATGAT CCTACTAGCA CATTTACTTG 481 CCCTAGTGGT AGTACAAATT ATAGGGTTGT TTTTTGTCCT AATGGTGTTA CTAGCCCAAA 541 TTTCCCCTTG GAGATGCCCT CAAGTGATGA AGAGGCTAAG TAAAATTGAG TCACTTTCTT 601 TTAAATTGCT TGAAGTAGTC GAGTTATATA ATTGGCTTGT AATAAACCTA ATATAATTAC 661 ATGAATAAAA GT Predicted gene structure (within gDNA segment 46166 to 52250): Exon 1 46904 47128 ( 225 n); cDNA 4 228 ( 225 n); score: 0.924 MATCH C08HBa0235H18.1+ SGN-E352685+ 0.924 225 0.335 C PGS_C08HBa0235H18.1+_SGN-E352685+ (46904 47128) Alignment (genomic DNA sequence = upper lines): CATCAATGCA CTGAGGGGCA CTAAGATGGC ACGTATATGG GGTCGTACTA AATGCAACTT 46963 |||||||||| | |||||||| |||||||||| |||||||||| |||||||| | | |||||||| CATCAATGCA CCGAGGGGCA CTAAGATGGC ACGTATATGG GGTCGTACGA ATTGCAACTT 63 TGACGGTGCT GGTAGAGGTT CTTGTGAGAC TGGTGATTGT GGTGGAGTCT TGCAGTGTAC 47023 ||| |||||| |||||||||| | ||| |||| |||||||||| ||||| |||| |||| ||||| TGATGGTGCT GGTAGAGGTT CATGTCAGAC TGGTGATTGT GGTGGGGTCT TGCAATGTAC 123 CGGGTGGGGT AAACCGCCAA ACACCTTGGC CGAATACGCC TTGAACCAGT TTAACAACCT 47083 ||||||||| ||||| |||| ||||| |||| ||| |||||| ||| |||||| ||| |||||| CGGGTGGGGC AAACCACCAA ACACCCTGGC CGAGTACGCC TTGGACCAGT TTAGCAACCT 183 AGATTTCTGG GACATTTCTT TAGTCGATGG ATTTAATCTG CAAAT 47128 |||||||||| |||||||||| |||||||||| ||||||| | | ||| AGATTTCTGG GACATTTCTT TAGTCGATGG ATTTAATATT CCAAT 228 hqPGS_C08HBa0235H18.1+_SGN-E352685+ (46904 47128) ******************************************************************************** EST sequence 319 +strand 463 n (File: SGN-E354546+) 1 TCATCAATGC ACCGAGGGGC ACTAAGATGG CACGTATATG GGGTCGTACG AATTGCAACT 61 TTGATGGTGC TGGTAGAGGT TCATGTCAGA CTGGTGATTG TGGTGGGGTC TTGCAATGTA 121 CCGGGTGGGG CAAACCACCA AACACCCTGG CCGAGTACGC CTTGGACCAG TTTAGCAACC 181 TAGATTTCTG GGACATTTCT TTAGTCGATG GATTTAATAT TCCAATGACT TTCGCCCCGA 241 CCAATCCTAG TGGAGGGAAA TGCCATGCAA TTCATTGTAC GGCTAATATA AATGGTGAAT 301 GTCCTGGTTC ACTTAGGGTA CCCCGGAGGA TGTAACAATC CTTGTACCAC GTTCGGAGGA 361 CAACAATATT GTTGCACACA AGGTCCATGT GGCCCTACTG ATTTGTCGAG ATTTTTCAAA 421 CAAGATGTCC TGATGCGTAT AGCTACCCAC AGATGATCCT ACT Predicted gene structure (within gDNA segment 46186 to 50180): Exon 1 46904 47128 ( 225 n); cDNA 2 226 ( 225 n); score: 0.924 MATCH C08HBa0235H18.1+ SGN-E354546+ 0.924 225 0.486 C PGS_C08HBa0235H18.1+_SGN-E354546+ (46904 47128) Alignment (genomic DNA sequence = upper lines): CATCAATGCA CTGAGGGGCA CTAAGATGGC ACGTATATGG GGTCGTACTA AATGCAACTT 46963 |||||||||| | |||||||| |||||||||| |||||||||| |||||||| | | |||||||| CATCAATGCA CCGAGGGGCA CTAAGATGGC ACGTATATGG GGTCGTACGA ATTGCAACTT 61 TGACGGTGCT GGTAGAGGTT CTTGTGAGAC TGGTGATTGT GGTGGAGTCT TGCAGTGTAC 47023 ||| |||||| |||||||||| | ||| |||| |||||||||| ||||| |||| |||| ||||| TGATGGTGCT GGTAGAGGTT CATGTCAGAC TGGTGATTGT GGTGGGGTCT TGCAATGTAC 121 CGGGTGGGGT AAACCGCCAA ACACCTTGGC CGAATACGCC TTGAACCAGT TTAACAACCT 47083 ||||||||| ||||| |||| ||||| |||| ||| |||||| ||| |||||| ||| |||||| CGGGTGGGGC AAACCACCAA ACACCCTGGC CGAGTACGCC TTGGACCAGT TTAGCAACCT 181 AGATTTCTGG GACATTTCTT TAGTCGATGG ATTTAATCTG CAAAT 47128 |||||||||| |||||||||| |||||||||| ||||||| | | ||| AGATTTCTGG GACATTTCTT TAGTCGATGG ATTTAATATT CCAAT 226 hqPGS_C08HBa0235H18.1+_SGN-E354546+ (46904 47128) ******************************************************************************** EST sequence 144 +strand 654 n (File: SGN-E212616+) 1 ATCAATGCTC CGAGGGGAAC TAAGATGGCA CGTATATGGG GTCGTACTGG TTGCAACTTT 61 AATGCTGCAG GCAGAGGTAC ATGTCAGACT GGTGATTGTG GTGGAGTCTT ACAGTGTACC 121 GGATGGGGCA AACCCCCAAA CACCCTAGCC GAGTACGCCT TGGACCAGTT TAGCAACTTA 181 GATTTTTGGG ACATTTCTTT AGTCGATGGA TTTAATATTC CAATGACTTT TGCCCCAACA 241 AAACCTAGTG GAGGAAAATG TCACGCAATT CATTGCACGG CCAATATAAA TGGTGAATGT 301 CCTCGCGCCC TTAAGGTACC TGGAGGATGT AACAACCCTT GTACCACGTT TGGAGGACAA 361 CAATATTGTT GCACCCAAGG TCCATGTGGC CCTACAGAGT TGTCCAAATT TTTCAAGAAA 421 AGATGTCCCG ATGCTTATAG CTACCCACAA GACGATCCTA CAAGCACATT TACTTGCCCT 481 GGTGGTAGTA CAAACTATAG GGTTGTCTTT TGTCCTAATG GTGTTGCTGA TCCAATTTCC 541 CCTTGGAGAT GCCTGCAAGT ACTGATGAAG TGGCCAAGTG AATTTGAGTT TCTTCATTTT 601 AAATCGCCTC AATTAGTCAA CTGATCTCTA CCCGTAATGA AAATCTTAAT AGCT Predicted gene structure (within gDNA segment 46143 to 52110): Exon 1 46905 47128 ( 224 n); cDNA 1 224 ( 224 n); score: 0.875 MATCH C08HBa0235H18.1+ SGN-E212616+ 0.875 224 0.343 C PGS_C08HBa0235H18.1+_SGN-E212616+ (46905 47128) Alignment (genomic DNA sequence = upper lines): ATCAATGCAC TGAGGGGCAC TAAGATGGCA CGTATATGGG GTCGTACTAA ATGCAACTTT 46964 |||||||| | |||||| || |||||||||| |||||||||| |||||||| ||||||||| ATCAATGCTC CGAGGGGAAC TAAGATGGCA CGTATATGGG GTCGTACTGG TTGCAACTTT 60 GACGGTGCTG GTAGAGGTTC TTGTGAGACT GGTGATTGTG GTGGAGTCTT GCAGTGTACC 47024 | | ||| | | |||||| | ||| ||||| |||||||||| |||||||||| ||||||||| AATGCTGCAG GCAGAGGTAC ATGTCAGACT GGTGATTGTG GTGGAGTCTT ACAGTGTACC 120 GGGTGGGGTA AACCGCCAAA CACCTTGGCC GAATACGCCT TGAACCAGTT TAACAACCTA 47084 || ||||| | |||| ||||| |||| | ||| || ||||||| || ||||||| || |||| || GGATGGGGCA AACCCCCAAA CACCCTAGCC GAGTACGCCT TGGACCAGTT TAGCAACTTA 180 GATTTCTGGG ACATTTCTTT AGTCGATGGA TTTAATCTGC AAAT 47128 ||||| |||| |||||||||| |||||||||| |||||| | | ||| GATTTTTGGG ACATTTCTTT AGTCGATGGA TTTAATATTC CAAT 224 hqPGS_C08HBa0235H18.1+_SGN-E212616+ (46905 47128) ******************************************************************************** EST sequence 253 +strand 499 n (File: SGN-E200099+) 1 ATCAATGCTC CGAGGGGAAC TAAGATGGCA CGTATATGGG GTCGTACTGG TTGCAACTTT 61 AATGCTGCAG GCAGAGGTAC ATGTCAGACT GGTGATTGTG GTGGAGTCTT ACAGTGTACC 121 GGATGGGGCA AACCCCCAAA CACCCTAGCC GAGTACGCCT TGGACCAGTT TAGCAACTTA 181 GATTTTTGGG ACATTTCTTT AGTCGATGGA TTTAATATTC CAATGACTTT TGCCCCAACA 241 AAACCTAGTG GAGGAAAATG TCACGCAATT CATTGCACGG CCAATATAAA TGGTGAATGT 301 CCTCGCGCCC TTAAGGTACC TGGAGGATGT AACAACCCTT GTACCACGTT TGGAGGACAA 361 CAATATTGTT GCACCCAAGG TCCATGTGGC CCTACAGAGT TGTCCAAATT TTTCAAGAAA 421 AGATGTCCCG ATGCTTATAG CTACCCACAA GACGATCCTA CAAGCACATT TACTTGCCCT 481 GGTGGTAGTA CAAACTATA Predicted gene structure (within gDNA segment 46143 to 50560): Exon 1 46905 47128 ( 224 n); cDNA 1 224 ( 224 n); score: 0.875 MATCH C08HBa0235H18.1+ SGN-E200099+ 0.875 224 0.449 C PGS_C08HBa0235H18.1+_SGN-E200099+ (46905 47128) Alignment (genomic DNA sequence = upper lines): ATCAATGCAC TGAGGGGCAC TAAGATGGCA CGTATATGGG GTCGTACTAA ATGCAACTTT 46964 |||||||| | |||||| || |||||||||| |||||||||| |||||||| ||||||||| ATCAATGCTC CGAGGGGAAC TAAGATGGCA CGTATATGGG GTCGTACTGG TTGCAACTTT 60 GACGGTGCTG GTAGAGGTTC TTGTGAGACT GGTGATTGTG GTGGAGTCTT GCAGTGTACC 47024 | | ||| | | |||||| | ||| ||||| |||||||||| |||||||||| ||||||||| AATGCTGCAG GCAGAGGTAC ATGTCAGACT GGTGATTGTG GTGGAGTCTT ACAGTGTACC 120 GGGTGGGGTA AACCGCCAAA CACCTTGGCC GAATACGCCT TGAACCAGTT TAACAACCTA 47084 || ||||| | |||| ||||| |||| | ||| || ||||||| || ||||||| || |||| || GGATGGGGCA AACCCCCAAA CACCCTAGCC GAGTACGCCT TGGACCAGTT TAGCAACTTA 180 GATTTCTGGG ACATTTCTTT AGTCGATGGA TTTAATCTGC AAAT 47128 ||||| |||| |||||||||| |||||||||| |||||| | | ||| GATTTTTGGG ACATTTCTTT AGTCGATGGA TTTAATATTC CAAT 224 hqPGS_C08HBa0235H18.1+_SGN-E200099+ (46905 47128) ******************************************************************************** EST sequence 332 +strand 350 n (File: SGN-E275799+) 1 TGCTCCGAGG GGAACTAAGA TGGCACGTAT ATGGGGTCGT ACTGGTTGCA ACTTTAATGC 61 TGCAGGCAGA GGTACATGTC AGACTGGTGA TTGTGGTGGA GTCTTACAGT GTACCGGATG 121 GGGCAAACCC CCAAACACCC TAGCCGAGTA CGCCTTGGAC CAGTTTAGCA ACTTAGATTT 181 TTGGGACATT TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTTGCCC CAACAAAACC 241 TAGTGGAGGA AAATGTCACG CAATTCATTG CACGGCCAAT ATAAATGGTG AATGTCCTCG 301 CGCCCTTAAA GTACCTGGAG GATGTAACAA CCCTTGTACC ACGTTTGGAG Predicted gene structure (within gDNA segment 46193 to 49120): Exon 1 46910 47128 ( 219 n); cDNA 1 219 ( 219 n); score: 0.872 MATCH C08HBa0235H18.1+ SGN-E275799+ 0.872 219 0.626 C PGS_C08HBa0235H18.1+_SGN-E275799+ (46910 47128) Alignment (genomic DNA sequence = upper lines): TGCACTGAGG GGCACTAAGA TGGCACGTAT ATGGGGTCGT ACTAAATGCA ACTTTGACGG 46969 ||| | |||| || ||||||| |||||||||| |||||||||| ||| |||| ||||| | | TGCTCCGAGG GGAACTAAGA TGGCACGTAT ATGGGGTCGT ACTGGTTGCA ACTTTAATGC 60 TGCTGGTAGA GGTTCTTGTG AGACTGGTGA TTGTGGTGGA GTCTTGCAGT GTACCGGGTG 47029 ||| || ||| ||| | ||| |||||||||| |||||||||| ||||| |||| ||||||| || TGCAGGCAGA GGTACATGTC AGACTGGTGA TTGTGGTGGA GTCTTACAGT GTACCGGATG 120 GGGTAAACCG CCAAACACCT TGGCCGAATA CGCCTTGAAC CAGTTTAACA ACCTAGATTT 47089 ||| ||||| ||||||||| | ||||| || ||||||| || ||||||| || || ||||||| GGGCAAACCC CCAAACACCC TAGCCGAGTA CGCCTTGGAC CAGTTTAGCA ACTTAGATTT 180 CTGGGACATT TCTTTAGTCG ATGGATTTAA TCTGCAAAT 47128 ||||||||| |||||||||| |||||||||| | | | ||| TTGGGACATT TCTTTAGTCG ATGGATTTAA TATTCCAAT 219 hqPGS_C08HBa0235H18.1+_SGN-E275799+ (46910 47128) ******************************************************************************** EST sequence 31 +strand 730 n (File: SGN-E210719+) 1 CGAGGGGAAC TAAGATGGCA CGTATATGGG GTCGTACTGG TTGCAACTTT AATGCTGCAG 61 GCAGAGGTAC ATGTCATACT GGTGATTGTG GTGGAGTCTT ACAGTGTACC GGATGGGGCA 121 AACCCCCAAA CACCCTAGCC GAGTACGCCT TGGACCAGTT TAGCAACTTA GATTTTTGGG 181 ACATTTCTTT AGTCGATGGA TTTAATATTC CAATGACTTT TGCCCCAACA AAACCTAGTG 241 GAGGAAAATG TCACGCAATT CATTGCACGG CCAATATAAA TGGTGAATGT CCTCGCGCCC 301 TTAAGGTACC TGGAGGATGT AACAACCCTT GTACCACGTT TGGAGGACAA CAATATTGTT 361 GCACCCAAGG TCCATGTGGC CCTACAGAGT TGTCCAAATT TTTCAAGAAA AGATGTCCCG 421 ATGCTTATAG CTACCCACAA GACGATCCTA CAAGCACATT TACTTGCCCT GGTGGTAGTA 481 CAAACTATAG GGTTGTCTTT TGTCCTAATG GTGTTGCTGA TCCAAATTTC CCCTTGGAGA 541 TGCCTGCAAG TACTGATGAA GTGGCCAAGT GAATTTGAGT TTCTTCATTT TAAATCGCCT 601 CAATTAGTCA ACTGATCTCT ACCGTAATGA AAGATCTTAA TAGCTCAGTT TTTTAAATAT 661 TCACTTTTAC TTTATTGATA AGAGTTCGTA GCAAACTTAA AGACCGGAAT AAGAGTTACA 721 TCTCAAAAAA Predicted gene structure (within gDNA segment 46243 to 53570): Exon 1 46916 47131 ( 216 n); cDNA 2 217 ( 216 n); score: 0.866 Intron 1 47132 50350 (3219 n); Pd: 0.000 (s: 0.86), Pa: 0.000 (s: 0) Exon 2 50351 50370 ( 20 n); cDNA 218 237 ( 20 n); score: 0.600 Intron 2 50371 52483 (2113 n); Pd: 0.900 (s: 0), Pa: 0.471 (s: 0) Exon 3 52484 52495 ( 12 n); cDNA 238 249 ( 12 n); score: 0.917 MATCH C08HBa0235H18.1+ SGN-E210719+ 0.866 248 0.340 C PGS_C08HBa0235H18.1+_SGN-E210719+ (46916 47131,50351 50370,52484 52495) Alignment (genomic DNA sequence = upper lines): GAGGGGCACT AAGATGGCAC GTATATGGGG TCGTACTAAA TGCAACTTTG ACGGTGCTGG 46975 |||||| ||| |||||||||| |||||||||| ||||||| ||||||||| | | ||| || GAGGGGAACT AAGATGGCAC GTATATGGGG TCGTACTGGT TGCAACTTTA ATGCTGCAGG 61 TAGAGGTTCT TGTGAGACTG GTGATTGTGG TGGAGTCTTG CAGTGTACCG GGTGGGGTAA 47035 |||||| | ||| | |||| |||||||||| ||||||||| |||||||||| | ||||| || CAGAGGTACA TGTCATACTG GTGATTGTGG TGGAGTCTTA CAGTGTACCG GATGGGGCAA 121 ACCGCCAAAC ACCTTGGCCG AATACGCCTT GAACCAGTTT AACAACCTAG ATTTCTGGGA 47095 ||| |||||| ||| | |||| | |||||||| | |||||||| | |||| ||| |||| ||||| ACCCCCAAAC ACCCTAGCCG AGTACGCCTT GGACCAGTTT AGCAACTTAG ATTTTTGGGA 181 CATTTCTTTA GTCGATGGAT TTAATCTGCA AATTAGAAAT TCGGGTAAGG AATTCTGTTG 47155 |||||||||| |||||||||| ||||| | | ||| | CATTTCTTTA GTCGATGGAT TTAATATTCC AATGAC.... .......... .......... 217 ACCGAAGGGA AGGTATTAGG CACCCCTCGA ATCCCGTGGT TCTAGCACGG TCGCTTTATT 47215 .......... .......... .......... .......... .......... .......... 217 AACTTTAATA TGACCTGACT TAATTTTGGA TATTATATTT TTTAAACTAA TTATAAAATT 47275 .......... .......... .......... .......... .......... .......... 217 GTTATTTATC CTCAAATTTA TTTTAAACTT ATTTCAAACT GGCTTATTTA TTTTAAAGGG 47335 .......... .......... .......... .......... .......... .......... 217 TGTTTATTTT TATTTTTATT TTTGTGTAAT TTTAAAATTG AACATCCGTA TATATTTTTT 47395 .......... .......... .......... .......... .......... .......... 217 TTGCTTATAT TTGTATGTTT TTAATTTTTA ATGTTATAAT AGGTAGAATA TATATAGATA 47455 .......... .......... .......... .......... .......... .......... 217 TCTAATTTCT AAGAATTAGA GTTTGTGTAA AAAGGACATA TTTAGAGTTC AAGTTAATTT 47515 .......... .......... .......... .......... .......... .......... 217 AGGATTACAT ATTTTAGATT TTATCGAGAC TCAATACAGA TACCAGATAT TAATTTCTAC 47575 .......... .......... .......... .......... .......... .......... 217 TGCAGGGTCT ATTTGGGAGT GGCGCTTCTA ACATGATTTT TTTCATATCC AAAGCTCGAA 47635 .......... .......... .......... .......... .......... .......... 217 TTCGAGATTT CTGATTAAGG TAAAGCATTC TCACTAGTGC ACCACAACTC ATGTTGGTCA 47695 .......... .......... .......... .......... .......... .......... 217 TATAAAATTT TTTAATTTTT GTGATAATAT TATTTTCTTC TAAAAAGTCT CACTCAATTA 47755 .......... .......... .......... .......... .......... .......... 217 AGAATATTCT TAACACTATA TTTAGCTTCT TCTATTTTTC AATTATATAT TAATATTTAT 47815 .......... .......... .......... .......... .......... .......... 217 TTGCACATAT TAAATTCATA ATTTAAATTG CAATTGACCG CATGCAAATC AAAGTCTTCG 47875 .......... .......... .......... .......... .......... .......... 217 TCAAATACGA CGAGTCGTAC ACATGCCTTA AAATTTGAGG GGCTTATTTT TTTAGCAATA 47935 .......... .......... .......... .......... .......... .......... 217 ATATACTTAT AAGTAATTTC AAAAGTAAGT ATCATCTATT TCAATTTTTA GTTTAACAGT 47995 .......... .......... .......... .......... .......... .......... 217 ATAAGATTTA AATGATTTTT TTATTTAATT TCAATTATCA TATCAAGTCA AAAAATAAGA 48055 .......... .......... .......... .......... .......... .......... 217 TAAATAAATG GAAAATTGAA AGTACTATTT ATTGAATAAA AATAAACTAT TTCATGTGAA 48115 .......... .......... .......... .......... .......... .......... 217 AGAAAAAAAA TAACTTTCCA TCACTTTTTA AGAAATATAT TAGTAGCAAC TTTGTATTCT 48175 .......... .......... .......... .......... .......... .......... 217 AAAAAAAAAT ATAGAAGAAT GGACTTTCTT TAAATTTTAA ATAGTACTTA TTTGAATTAT 48235 .......... .......... .......... .......... .......... .......... 217 AAAATAATCT CAATTAATGT TCTATTTTTT TTCCAAGAGA TATATTATGG TTTAAAAATT 48295 .......... .......... .......... .......... .......... .......... 217 AATCCATGAT GTGGAAAAAT GATCAGGAAA TTTTCCCACA AACCACTATA TAACTTCTTC 48355 .......... .......... .......... .......... .......... .......... 217 TTTTCTGTAC TTTTGAATTC GATTAAATTA AAAATTTTGT TAAAAAATTC AAATTGAAGA 48415 .......... .......... .......... .......... .......... .......... 217 TATAACTTTC AACTTTAATG AAAATTTTAG ATCAACATTT AAATTTGAGA TTACTGGAAA 48475 .......... .......... .......... .......... .......... .......... 217 AAAAATTGGC ATGTATTACT TATGTAATAA TAGTTATTAA CTATTTGTTT TAGAATTATC 48535 .......... .......... .......... .......... .......... .......... 217 AAAATTCCAG TATAATTAGG TGATTCTTTT TTGGGACATT GTGGGGTTTC AACTTTCAAT 48595 .......... .......... .......... .......... .......... .......... 217 TTACAAGACT AGCAAGACTT GCTGTTGATA GGTTAGAAAA GTCTTTGTAA GAAATGAATT 48655 .......... .......... .......... .......... .......... .......... 217 GTATTATTTT TCAAAAAAAT TATAATATAA AAGAAGATAT AAATACATGT GTAATGATAT 48715 .......... .......... .......... .......... .......... .......... 217 ATTATCTAAT TAAAATAATA AGTATTTTAA AGTTAAAGTA TATTACTAAA TATAAAAAAG 48775 .......... .......... .......... .......... .......... .......... 217 ATATTTATCA TTTATTCAAA ACTGATTAAA GAAAATCACA TAAATTAAAA TGAAAGAAAT 48835 .......... .......... .......... .......... .......... .......... 217 ACAGCCTTAT TTTCTCAAAT TAGTGGAAAT AGTTAAAATT TGAATTTGAA ATAATGACAT 48895 .......... .......... .......... .......... .......... .......... 217 TGCAAACCCG TATTGTATAT ATAATATATC AAAAAGCTAT ATACCTATAG GGAAATATAA 48955 .......... .......... .......... .......... .......... .......... 217 TTAATATATA AATTTTTCTC GTCAAGTAAA AAAGTGTTAA TACATATCTT AATATATAGA 49015 .......... .......... .......... .......... .......... .......... 217 TATTCATTCA AATTCAAATG TCTTAATTTT AAGGAAAGTA TTAGAAACAA TTAAATGCTT 49075 .......... .......... .......... .......... .......... .......... 217 ACAACTAAAC GAAACAAAAA ATTCAATCTG TCGGTGGCAT TTACTGACAC TAAAAGGGAA 49135 .......... .......... .......... .......... .......... .......... 217 TAATTAGAAA TGTTCATTTT TTAAAAAATA AAATAAAAAT AGAAATCTCC TATAACCAAA 49195 .......... .......... .......... .......... .......... .......... 217 AACGACATTT TCTATTAATT TACCCTTTAT ATATTTTTTA TCACTTTTAA AACACAATCC 49255 .......... .......... .......... .......... .......... .......... 217 TAATTTTTAG GGAAAAAATA AATTAATTCT TCATATCTTG ATTTTTAAAT TGACTAGGAT 49315 .......... .......... .......... .......... .......... .......... 217 TTTAAAATGA ACTTTGTCTT TAATAATGTT GATAATTAAT ATGAGACAAA GTCGGAGAAT 49375 .......... .......... .......... .......... .......... .......... 217 ACTTAATGGC TTTAGTCATG TTGCTCAGAA AGAAATGTTT AATTAGTTAT ATACTACGGA 49435 .......... .......... .......... .......... .......... .......... 217 AAAGGGTTAA AATATTCTTA AACTATCAGA AATAGATTTA CCCTTAAATT ATATTTTGAT 49495 .......... .......... .......... .......... .......... .......... 217 TTAAAACTAT TTTTCTATCA AATTATTGGG TCAAAAATAC CCTTCTTATT TTTTTTACCC 49555 .......... .......... .......... .......... .......... .......... 217 TTTTCCGTAT ATATTTTTAA AAAAGACATT TTGATGAAAA TTTTTAGAAA TTGGAGCAAA 49615 .......... .......... .......... .......... .......... .......... 217 AAGCATTAGA TGATCATAAT AATACATATT GCAAATATTT GACTGCAAAG CTAAGTCTTT 49675 .......... .......... .......... .......... .......... .......... 217 GTCAATAATA AATATGAAGC TATTGCAATT TGTGGTCCTC ATGCATTGGA AATAGTATGC 49735 .......... .......... .......... .......... .......... .......... 217 ATAGCCTTTT AATTAAGATG TACATTGAGT TACATAGCTG GAAAGTCGTC GTTTATTAAG 49795 .......... .......... .......... .......... .......... .......... 217 AGTGTTTTAT TTATTAATGT GAATTTTTTA AATACAAATT TATATTTAAT CGAGATTTAA 49855 .......... .......... .......... .......... .......... .......... 217 TATGAATAAT TAAACACCAA AATTTAAATT TAAGAAGGTA CAATAATTTA CCCCTCCTTT 49915 .......... .......... .......... .......... .......... .......... 217 TGTTTTTAAC TAGCTAGATC GAATTGTATA TATAGGTAAT CATAATATTC AAATTGTGCA 49975 .......... .......... .......... .......... .......... .......... 217 ATATTTGACT GTGTATAGCT AAGTGGTCAA TTTATAGTTG GTCGTCATCA CTAGAACTTT 50035 .......... .......... .......... .......... .......... .......... 217 ATAGCCTTTT AACTCTTCTT TGAAAAATTA AATTGATTAG AATACTTTAA AGAAATTAAT 50095 .......... .......... .......... .......... .......... .......... 217 TTAATTTCAT GTGAAAAAGT AATTTTAAGC CACTTAATTA ATTTCATGTA CTTAATAATG 50155 .......... .......... .......... .......... .......... .......... 217 GGAACGAGGA ATATAAAATT ATATTGGGTG AAGCTTCCAC AAAGAGAATC CTTAATATTA 50215 .......... .......... .......... .......... .......... .......... 217 TAATATTATA TAATACTTTT TGTTCTGAAT TAAATCTCGA TGATTTTTAA AATAAAATCT 50275 .......... .......... .......... .......... .......... .......... 217 AGCTCGCTTA ATTAAGAGTG TTCATAATGT TAATCGTAAC TTCTCTTACT TTTCAATTAT 50335 .......... .......... .......... .......... .......... .......... 217 ATGGCAAATG TGAAGTTTTG CACAACTAGA AAGCAATCTC CTTCTCGAAT TAAGTTTCAT 50395 ||||| | | | | | | | .......... .....TTTTG CCCCAACAAA ACCTA..... .......... .......... 237 GTATGCATGA CTTACCACTT TATTCCTCGA ATAATTTTAC ATAGCTCATC ACTAAAATCG 50455 .......... .......... .......... .......... .......... .......... 237 TCGATTCATG TGTTGAAATG GATATTAATT ATCTGTCACG TATAGTTTTC AAATATTTAT 50515 .......... .......... .......... .......... .......... .......... 237 GATCATCGAA GTCCATATAT AATGCAAGCT CCTATTATTA TTAATTTTTG TCTAGCTTTT 50575 .......... .......... .......... .......... .......... .......... 237 CATAGAGGGT GAAAGACGGA TCAGACTCAA TACCATGCAT CTTCATACTC ATCTCGTCAA 50635 .......... .......... .......... .......... .......... .......... 237 AAGCTATTAA CTTAAACCTT GAGGGAAACT TAAAAGTGAC CAAATCATCA TAAAGATATT 50695 .......... .......... .......... .......... .......... .......... 237 CTTTATTTTC CTTTTATTCA TCACAAACTA AGGAACTACA TAGTACTTCC ATATTATCAC 50755 .......... .......... .......... .......... .......... .......... 237 TATATATATG ATGAATAAAA ACATCATATT TTTCCTTGAC TTAGTAATTA ATCCTCCTAG 50815 .......... .......... .......... .......... .......... .......... 237 CAAGGAGAAT AACATAGCCT TATTCAAATT ATTAATACAA AAGGATATAT AGATAGGCAG 50875 .......... .......... .......... .......... .......... .......... 237 ATAGATATTT AAGGACAGAA TACAACCCTA TAATTAGTAC CAGCAGGGCA AGTGAAAGTA 50935 .......... .......... .......... .......... .......... .......... 237 CTAGTTTGAT CATCCTTAGG GTAACTATAT GCATCAGGAC ACCTCTCCTT AAAAAATCTC 50995 .......... .......... .......... .......... .......... .......... 237 GAAAATTTAG TCGGACCACA GTTACCAGAG TTACAACAAT ATTGATCAGT CTTAAAAACA 51055 .......... .......... .......... .......... .......... .......... 237 GTACAAGGGT TGTTACATCC TCCGGGAGCT TTCAATTCAT TAGGACATTG TTGATTAATT 51115 .......... .......... .......... .......... .......... .......... 237 TCCGCTTTAC ACGTTATGCC ACGGGTGCAC CCATTGGAAG TTGGACTAAA TTCCATAGGA 51175 .......... .......... .......... .......... .......... .......... 237 ACATTAAATC CATCGACAAG AGAAATATCG AAAAAATCTT TATTTGCAAA TTGGTTTAGG 51235 .......... .......... .......... .......... .......... .......... 237 GCATATTCAG CTAATGTATT TGGTGGTACA CCAAAAGATT TACATACAAG AAGACCATTA 51295 .......... .......... .......... .......... .......... .......... 237 CAATCTCCAG TTTGGCATTT TCCCTTACCG GATGCATCGA AATTGCATCC GGTACGGCCC 51355 .......... .......... .......... .......... .......... .......... 237 CAAACTCGAG CTTGTTTAGT CCCCGGAGGG GCGTTTATCG TCCACGTTTG GCCACGATCG 51415 .......... .......... .......... .......... .......... .......... 237 AGGCGTTTGC CGCCTCCGGC TGGGACTCCG GCAGCCCAAA CGGTGTAGGG ACAATTGTTA 51475 .......... .......... .......... .......... .......... .......... 237 CGAACTAAAA TTGTGGCTGC ATTGGCATAG GTGAAAAAAA GGGAAAAGAG AATAAAAATT 51535 .......... .......... .......... .......... .......... .......... 237 GAAGTTTTCA TATTTTTATT TTTTGTGTGA CTACTAATAA ATTGGGATGA GTGATTTTTT 51595 .......... .......... .......... .......... .......... .......... 237 ATGAGGGAGT AATAATAATT AGAAGGGTAT TTATAGGGTA AAAATGGGGC ACCAATATAG 51655 .......... .......... .......... .......... .......... .......... 237 TTGGTAAGTA ACTAATTTGT TTGAAATTTT AGTTTGTGAT AATGTAATGT AATGTTTTGA 51715 .......... .......... .......... .......... .......... .......... 237 GTAGACTAGT ACATTATTCT ATCGAGGGTG CAAGGTGTGG CTACTAGAAG TTGTAGAAAA 51775 .......... .......... .......... .......... .......... .......... 237 TGTAGCTAGG GTCTATTATT CAAGCTTGGA TTTTATTTTT TACTTTTGAA TAATATGTAT 51835 .......... .......... .......... .......... .......... .......... 237 ATATATATAT ATTTATTTTT TTTACGTATC AGAACGAAGT TCGATTAAAT TTAGATACGC 51895 .......... .......... .......... .......... .......... .......... 237 GCTTTAAAGT TGTATATTGA GTATAAAACG TTTCCTAACA AAAATAACTA TGTACTTAAG 51955 .......... .......... .......... .......... .......... .......... 237 AGACTCGAAC TCGAAACATC TGATTAAGAA TTAATGAAAT AGAATACTTA TCACTTCACG 52015 .......... .......... .......... .......... .......... .......... 237 GCCAAAAGCG AAAAAGAAAA ATCAAAGTCA AGAACAATGA ACTTAGAATT TGGATGGTAC 52075 .......... .......... .......... .......... .......... .......... 237 ATAAATTCAA ACTTTTTTAG ATAATCATGC AAGTTTAAGG ACCTCTATTT AGCAACAATC 52135 .......... .......... .......... .......... .......... .......... 237 GAAAGGCTAT GCACACATGA ACATTATATT GCTTTGTGAT TTACATAAGT GACTTTTTTC 52195 .......... .......... .......... .......... .......... .......... 237 AGTATCCACA TTTGATATTC ATATTGAATT TTAACACTCT ATAAATAATA AAAATCGTGA 52255 .......... .......... .......... .......... .......... .......... 237 TTGAATTCGA TCGAAATCTT AAATTAAAAA TTTGAATCAA AATTACTGAA TTCTTATTCG 52315 .......... .......... .......... .......... .......... .......... 237 TCAATATTTA ATGATCTGTA TTAGTGCCCC TCGAATCAAT AAAGTTTAAA AGATGGTGAC 52375 .......... .......... .......... .......... .......... .......... 237 TTGTTAAGTG TACAAAAAAA TCAAAAGAAA AATAGAGACT TGAAAGTAAG AAATATCAAA 52435 .......... .......... .......... .......... .......... .......... 237 GTTTACTAAA TATGAAAGAA AATTGTTAAC TACCTTGTAC AAAATTAGGT GGTGGAAAAT 52495 || || ||||||| .......... .......... .......... .......... ........GT GGAGGAAAAT 249 hqPGS_C08HBa0235H18.1+_SGN-E210719+ (46916 47131) ******************************************************************************** EST sequence 35 +strand 712 n (File: SGN-E210726+) 1 CGAGGGGAAC TAAGATGGCA CGTATATGGG GTCGTACTGG TTGCAACTTT AATGCTGCAG 61 GCAGAGGTAC ATGTCAGACT GGTGATTGTG GTGGAGTCTT ACAGTGTACC GGATGGGGCA 121 AACCCCCAAA CACCCTAGCC GAGTACGCCT TGGACCAGTT TAGCAACTTA GATTTTTGGG 181 ACATTTCTTT AGTCGATGGA TTTAATATTC CAATGACTTT TGCCCCAACA AAACCTAGTG 241 GAGGAAAATG TCACGCAATT CATTGCACGG CCAATATAAA TGGTGAATGT CCTCGCGCCC 301 TTAAGGTACC TGGAGGATGT AACAACCCTT GTACCACGTT TGGAGGACAA CAATATTGTT 361 GCACCCAAGG TCCATGTGGC CCTACAGAGT TGTCCAAATT TTTCAAGAAA AGATGTCCCG 421 ATGCTTATAG CTACCCACAA GACGATCCTA CAAGCACATT TACTTGCCCT GGTGGTAGTA 481 CAAACTATAG GGTTGTCTTT TGTCCTAATG GTGTTGCTGA TCCAAATTTC CCCTTGGAGA 541 TGCCTGCAAG TACTGATGAA GTGGCCAAGT GAATTTGAGT TTCTTCATTT TAAATCGCCT 601 CAATTAGTCA ACTGATCTCT ACCGTAATGA AAAATCTTAA TAGCTCAGTT TTTTAAATAT 661 TCACTTTTAC TTTATTGATA AGAGTTCGTA ACAAACTTAA AGAACCGGAA TA Predicted gene structure (within gDNA segment 46243 to 53390): Exon 1 46916 47131 ( 216 n); cDNA 2 217 ( 216 n); score: 0.870 Intron 1 47132 50350 (3219 n); Pd: 0.000 (s: 0.86), Pa: 0.000 (s: 0) Exon 2 50351 50370 ( 20 n); cDNA 218 237 ( 20 n); score: 0.600 Intron 2 50371 52483 (2113 n); Pd: 0.900 (s: 0), Pa: 0.471 (s: 0) Exon 3 52484 52495 ( 12 n); cDNA 238 249 ( 12 n); score: 0.917 MATCH C08HBa0235H18.1+ SGN-E210726+ 0.870 248 0.348 C PGS_C08HBa0235H18.1+_SGN-E210726+ (46916 47131,50351 50370,52484 52495) Alignment (genomic DNA sequence = upper lines): GAGGGGCACT AAGATGGCAC GTATATGGGG TCGTACTAAA TGCAACTTTG ACGGTGCTGG 46975 |||||| ||| |||||||||| |||||||||| ||||||| ||||||||| | | ||| || GAGGGGAACT AAGATGGCAC GTATATGGGG TCGTACTGGT TGCAACTTTA ATGCTGCAGG 61 TAGAGGTTCT TGTGAGACTG GTGATTGTGG TGGAGTCTTG CAGTGTACCG GGTGGGGTAA 47035 |||||| | ||| |||||| |||||||||| ||||||||| |||||||||| | ||||| || CAGAGGTACA TGTCAGACTG GTGATTGTGG TGGAGTCTTA CAGTGTACCG GATGGGGCAA 121 ACCGCCAAAC ACCTTGGCCG AATACGCCTT GAACCAGTTT AACAACCTAG ATTTCTGGGA 47095 ||| |||||| ||| | |||| | |||||||| | |||||||| | |||| ||| |||| ||||| ACCCCCAAAC ACCCTAGCCG AGTACGCCTT GGACCAGTTT AGCAACTTAG ATTTTTGGGA 181 CATTTCTTTA GTCGATGGAT TTAATCTGCA AATTAGAAAT TCGGGTAAGG AATTCTGTTG 47155 |||||||||| |||||||||| ||||| | | ||| | CATTTCTTTA GTCGATGGAT TTAATATTCC AATGAC.... .......... .......... 217 ACCGAAGGGA AGGTATTAGG CACCCCTCGA ATCCCGTGGT TCTAGCACGG TCGCTTTATT 47215 .......... .......... .......... .......... .......... .......... 217 AACTTTAATA TGACCTGACT TAATTTTGGA TATTATATTT TTTAAACTAA TTATAAAATT 47275 .......... .......... .......... .......... .......... .......... 217 GTTATTTATC CTCAAATTTA TTTTAAACTT ATTTCAAACT GGCTTATTTA TTTTAAAGGG 47335 .......... .......... .......... .......... .......... .......... 217 TGTTTATTTT TATTTTTATT TTTGTGTAAT TTTAAAATTG AACATCCGTA TATATTTTTT 47395 .......... .......... .......... .......... .......... .......... 217 TTGCTTATAT TTGTATGTTT TTAATTTTTA ATGTTATAAT AGGTAGAATA TATATAGATA 47455 .......... .......... .......... .......... .......... .......... 217 TCTAATTTCT AAGAATTAGA GTTTGTGTAA AAAGGACATA TTTAGAGTTC AAGTTAATTT 47515 .......... .......... .......... .......... .......... .......... 217 AGGATTACAT ATTTTAGATT TTATCGAGAC TCAATACAGA TACCAGATAT TAATTTCTAC 47575 .......... .......... .......... .......... .......... .......... 217 TGCAGGGTCT ATTTGGGAGT GGCGCTTCTA ACATGATTTT TTTCATATCC AAAGCTCGAA 47635 .......... .......... .......... .......... .......... .......... 217 TTCGAGATTT CTGATTAAGG TAAAGCATTC TCACTAGTGC ACCACAACTC ATGTTGGTCA 47695 .......... .......... .......... .......... .......... .......... 217 TATAAAATTT TTTAATTTTT GTGATAATAT TATTTTCTTC TAAAAAGTCT CACTCAATTA 47755 .......... .......... .......... .......... .......... .......... 217 AGAATATTCT TAACACTATA TTTAGCTTCT TCTATTTTTC AATTATATAT TAATATTTAT 47815 .......... .......... .......... .......... .......... .......... 217 TTGCACATAT TAAATTCATA ATTTAAATTG CAATTGACCG CATGCAAATC AAAGTCTTCG 47875 .......... .......... .......... .......... .......... .......... 217 TCAAATACGA CGAGTCGTAC ACATGCCTTA AAATTTGAGG GGCTTATTTT TTTAGCAATA 47935 .......... .......... .......... .......... .......... .......... 217 ATATACTTAT AAGTAATTTC AAAAGTAAGT ATCATCTATT TCAATTTTTA GTTTAACAGT 47995 .......... .......... .......... .......... .......... .......... 217 ATAAGATTTA AATGATTTTT TTATTTAATT TCAATTATCA TATCAAGTCA AAAAATAAGA 48055 .......... .......... .......... .......... .......... .......... 217 TAAATAAATG GAAAATTGAA AGTACTATTT ATTGAATAAA AATAAACTAT TTCATGTGAA 48115 .......... .......... .......... .......... .......... .......... 217 AGAAAAAAAA TAACTTTCCA TCACTTTTTA AGAAATATAT TAGTAGCAAC TTTGTATTCT 48175 .......... .......... .......... .......... .......... .......... 217 AAAAAAAAAT ATAGAAGAAT GGACTTTCTT TAAATTTTAA ATAGTACTTA TTTGAATTAT 48235 .......... .......... .......... .......... .......... .......... 217 AAAATAATCT CAATTAATGT TCTATTTTTT TTCCAAGAGA TATATTATGG TTTAAAAATT 48295 .......... .......... .......... .......... .......... .......... 217 AATCCATGAT GTGGAAAAAT GATCAGGAAA TTTTCCCACA AACCACTATA TAACTTCTTC 48355 .......... .......... .......... .......... .......... .......... 217 TTTTCTGTAC TTTTGAATTC GATTAAATTA AAAATTTTGT TAAAAAATTC AAATTGAAGA 48415 .......... .......... .......... .......... .......... .......... 217 TATAACTTTC AACTTTAATG AAAATTTTAG ATCAACATTT AAATTTGAGA TTACTGGAAA 48475 .......... .......... .......... .......... .......... .......... 217 AAAAATTGGC ATGTATTACT TATGTAATAA TAGTTATTAA CTATTTGTTT TAGAATTATC 48535 .......... .......... .......... .......... .......... .......... 217 AAAATTCCAG TATAATTAGG TGATTCTTTT TTGGGACATT GTGGGGTTTC AACTTTCAAT 48595 .......... .......... .......... .......... .......... .......... 217 TTACAAGACT AGCAAGACTT GCTGTTGATA GGTTAGAAAA GTCTTTGTAA GAAATGAATT 48655 .......... .......... .......... .......... .......... .......... 217 GTATTATTTT TCAAAAAAAT TATAATATAA AAGAAGATAT AAATACATGT GTAATGATAT 48715 .......... .......... .......... .......... .......... .......... 217 ATTATCTAAT TAAAATAATA AGTATTTTAA AGTTAAAGTA TATTACTAAA TATAAAAAAG 48775 .......... .......... .......... .......... .......... .......... 217 ATATTTATCA TTTATTCAAA ACTGATTAAA GAAAATCACA TAAATTAAAA TGAAAGAAAT 48835 .......... .......... .......... .......... .......... .......... 217 ACAGCCTTAT TTTCTCAAAT TAGTGGAAAT AGTTAAAATT TGAATTTGAA ATAATGACAT 48895 .......... .......... .......... .......... .......... .......... 217 TGCAAACCCG TATTGTATAT ATAATATATC AAAAAGCTAT ATACCTATAG GGAAATATAA 48955 .......... .......... .......... .......... .......... .......... 217 TTAATATATA AATTTTTCTC GTCAAGTAAA AAAGTGTTAA TACATATCTT AATATATAGA 49015 .......... .......... .......... .......... .......... .......... 217 TATTCATTCA AATTCAAATG TCTTAATTTT AAGGAAAGTA TTAGAAACAA TTAAATGCTT 49075 .......... .......... .......... .......... .......... .......... 217 ACAACTAAAC GAAACAAAAA ATTCAATCTG TCGGTGGCAT TTACTGACAC TAAAAGGGAA 49135 .......... .......... .......... .......... .......... .......... 217 TAATTAGAAA TGTTCATTTT TTAAAAAATA AAATAAAAAT AGAAATCTCC TATAACCAAA 49195 .......... .......... .......... .......... .......... .......... 217 AACGACATTT TCTATTAATT TACCCTTTAT ATATTTTTTA TCACTTTTAA AACACAATCC 49255 .......... .......... .......... .......... .......... .......... 217 TAATTTTTAG GGAAAAAATA AATTAATTCT TCATATCTTG ATTTTTAAAT TGACTAGGAT 49315 .......... .......... .......... .......... .......... .......... 217 TTTAAAATGA ACTTTGTCTT TAATAATGTT GATAATTAAT ATGAGACAAA GTCGGAGAAT 49375 .......... .......... .......... .......... .......... .......... 217 ACTTAATGGC TTTAGTCATG TTGCTCAGAA AGAAATGTTT AATTAGTTAT ATACTACGGA 49435 .......... .......... .......... .......... .......... .......... 217 AAAGGGTTAA AATATTCTTA AACTATCAGA AATAGATTTA CCCTTAAATT ATATTTTGAT 49495 .......... .......... .......... .......... .......... .......... 217 TTAAAACTAT TTTTCTATCA AATTATTGGG TCAAAAATAC CCTTCTTATT TTTTTTACCC 49555 .......... .......... .......... .......... .......... .......... 217 TTTTCCGTAT ATATTTTTAA AAAAGACATT TTGATGAAAA TTTTTAGAAA TTGGAGCAAA 49615 .......... .......... .......... .......... .......... .......... 217 AAGCATTAGA TGATCATAAT AATACATATT GCAAATATTT GACTGCAAAG CTAAGTCTTT 49675 .......... .......... .......... .......... .......... .......... 217 GTCAATAATA AATATGAAGC TATTGCAATT TGTGGTCCTC ATGCATTGGA AATAGTATGC 49735 .......... .......... .......... .......... .......... .......... 217 ATAGCCTTTT AATTAAGATG TACATTGAGT TACATAGCTG GAAAGTCGTC GTTTATTAAG 49795 .......... .......... .......... .......... .......... .......... 217 AGTGTTTTAT TTATTAATGT GAATTTTTTA AATACAAATT TATATTTAAT CGAGATTTAA 49855 .......... .......... .......... .......... .......... .......... 217 TATGAATAAT TAAACACCAA AATTTAAATT TAAGAAGGTA CAATAATTTA CCCCTCCTTT 49915 .......... .......... .......... .......... .......... .......... 217 TGTTTTTAAC TAGCTAGATC GAATTGTATA TATAGGTAAT CATAATATTC AAATTGTGCA 49975 .......... .......... .......... .......... .......... .......... 217 ATATTTGACT GTGTATAGCT AAGTGGTCAA TTTATAGTTG GTCGTCATCA CTAGAACTTT 50035 .......... .......... .......... .......... .......... .......... 217 ATAGCCTTTT AACTCTTCTT TGAAAAATTA AATTGATTAG AATACTTTAA AGAAATTAAT 50095 .......... .......... .......... .......... .......... .......... 217 TTAATTTCAT GTGAAAAAGT AATTTTAAGC CACTTAATTA ATTTCATGTA CTTAATAATG 50155 .......... .......... .......... .......... .......... .......... 217 GGAACGAGGA ATATAAAATT ATATTGGGTG AAGCTTCCAC AAAGAGAATC CTTAATATTA 50215 .......... .......... .......... .......... .......... .......... 217 TAATATTATA TAATACTTTT TGTTCTGAAT TAAATCTCGA TGATTTTTAA AATAAAATCT 50275 .......... .......... .......... .......... .......... .......... 217 AGCTCGCTTA ATTAAGAGTG TTCATAATGT TAATCGTAAC TTCTCTTACT TTTCAATTAT 50335 .......... .......... .......... .......... .......... .......... 217 ATGGCAAATG TGAAGTTTTG CACAACTAGA AAGCAATCTC CTTCTCGAAT TAAGTTTCAT 50395 ||||| | | | | | | | .......... .....TTTTG CCCCAACAAA ACCTA..... .......... .......... 237 GTATGCATGA CTTACCACTT TATTCCTCGA ATAATTTTAC ATAGCTCATC ACTAAAATCG 50455 .......... .......... .......... .......... .......... .......... 237 TCGATTCATG TGTTGAAATG GATATTAATT ATCTGTCACG TATAGTTTTC AAATATTTAT 50515 .......... .......... .......... .......... .......... .......... 237 GATCATCGAA GTCCATATAT AATGCAAGCT CCTATTATTA TTAATTTTTG TCTAGCTTTT 50575 .......... .......... .......... .......... .......... .......... 237 CATAGAGGGT GAAAGACGGA TCAGACTCAA TACCATGCAT CTTCATACTC ATCTCGTCAA 50635 .......... .......... .......... .......... .......... .......... 237 AAGCTATTAA CTTAAACCTT GAGGGAAACT TAAAAGTGAC CAAATCATCA TAAAGATATT 50695 .......... .......... .......... .......... .......... .......... 237 CTTTATTTTC CTTTTATTCA TCACAAACTA AGGAACTACA TAGTACTTCC ATATTATCAC 50755 .......... .......... .......... .......... .......... .......... 237 TATATATATG ATGAATAAAA ACATCATATT TTTCCTTGAC TTAGTAATTA ATCCTCCTAG 50815 .......... .......... .......... .......... .......... .......... 237 CAAGGAGAAT AACATAGCCT TATTCAAATT ATTAATACAA AAGGATATAT AGATAGGCAG 50875 .......... .......... .......... .......... .......... .......... 237 ATAGATATTT AAGGACAGAA TACAACCCTA TAATTAGTAC CAGCAGGGCA AGTGAAAGTA 50935 .......... .......... .......... .......... .......... .......... 237 CTAGTTTGAT CATCCTTAGG GTAACTATAT GCATCAGGAC ACCTCTCCTT AAAAAATCTC 50995 .......... .......... .......... .......... .......... .......... 237 GAAAATTTAG TCGGACCACA GTTACCAGAG TTACAACAAT ATTGATCAGT CTTAAAAACA 51055 .......... .......... .......... .......... .......... .......... 237 GTACAAGGGT TGTTACATCC TCCGGGAGCT TTCAATTCAT TAGGACATTG TTGATTAATT 51115 .......... .......... .......... .......... .......... .......... 237 TCCGCTTTAC ACGTTATGCC ACGGGTGCAC CCATTGGAAG TTGGACTAAA TTCCATAGGA 51175 .......... .......... .......... .......... .......... .......... 237 ACATTAAATC CATCGACAAG AGAAATATCG AAAAAATCTT TATTTGCAAA TTGGTTTAGG 51235 .......... .......... .......... .......... .......... .......... 237 GCATATTCAG CTAATGTATT TGGTGGTACA CCAAAAGATT TACATACAAG AAGACCATTA 51295 .......... .......... .......... .......... .......... .......... 237 CAATCTCCAG TTTGGCATTT TCCCTTACCG GATGCATCGA AATTGCATCC GGTACGGCCC 51355 .......... .......... .......... .......... .......... .......... 237 CAAACTCGAG CTTGTTTAGT CCCCGGAGGG GCGTTTATCG TCCACGTTTG GCCACGATCG 51415 .......... .......... .......... .......... .......... .......... 237 AGGCGTTTGC CGCCTCCGGC TGGGACTCCG GCAGCCCAAA CGGTGTAGGG ACAATTGTTA 51475 .......... .......... .......... .......... .......... .......... 237 CGAACTAAAA TTGTGGCTGC ATTGGCATAG GTGAAAAAAA GGGAAAAGAG AATAAAAATT 51535 .......... .......... .......... .......... .......... .......... 237 GAAGTTTTCA TATTTTTATT TTTTGTGTGA CTACTAATAA ATTGGGATGA GTGATTTTTT 51595 .......... .......... .......... .......... .......... .......... 237 ATGAGGGAGT AATAATAATT AGAAGGGTAT TTATAGGGTA AAAATGGGGC ACCAATATAG 51655 .......... .......... .......... .......... .......... .......... 237 TTGGTAAGTA ACTAATTTGT TTGAAATTTT AGTTTGTGAT AATGTAATGT AATGTTTTGA 51715 .......... .......... .......... .......... .......... .......... 237 GTAGACTAGT ACATTATTCT ATCGAGGGTG CAAGGTGTGG CTACTAGAAG TTGTAGAAAA 51775 .......... .......... .......... .......... .......... .......... 237 TGTAGCTAGG GTCTATTATT CAAGCTTGGA TTTTATTTTT TACTTTTGAA TAATATGTAT 51835 .......... .......... .......... .......... .......... .......... 237 ATATATATAT ATTTATTTTT TTTACGTATC AGAACGAAGT TCGATTAAAT TTAGATACGC 51895 .......... .......... .......... .......... .......... .......... 237 GCTTTAAAGT TGTATATTGA GTATAAAACG TTTCCTAACA AAAATAACTA TGTACTTAAG 51955 .......... .......... .......... .......... .......... .......... 237 AGACTCGAAC TCGAAACATC TGATTAAGAA TTAATGAAAT AGAATACTTA TCACTTCACG 52015 .......... .......... .......... .......... .......... .......... 237 GCCAAAAGCG AAAAAGAAAA ATCAAAGTCA AGAACAATGA ACTTAGAATT TGGATGGTAC 52075 .......... .......... .......... .......... .......... .......... 237 ATAAATTCAA ACTTTTTTAG ATAATCATGC AAGTTTAAGG ACCTCTATTT AGCAACAATC 52135 .......... .......... .......... .......... .......... .......... 237 GAAAGGCTAT GCACACATGA ACATTATATT GCTTTGTGAT TTACATAAGT GACTTTTTTC 52195 .......... .......... .......... .......... .......... .......... 237 AGTATCCACA TTTGATATTC ATATTGAATT TTAACACTCT ATAAATAATA AAAATCGTGA 52255 .......... .......... .......... .......... .......... .......... 237 TTGAATTCGA TCGAAATCTT AAATTAAAAA TTTGAATCAA AATTACTGAA TTCTTATTCG 52315 .......... .......... .......... .......... .......... .......... 237 TCAATATTTA ATGATCTGTA TTAGTGCCCC TCGAATCAAT AAAGTTTAAA AGATGGTGAC 52375 .......... .......... .......... .......... .......... .......... 237 TTGTTAAGTG TACAAAAAAA TCAAAAGAAA AATAGAGACT TGAAAGTAAG AAATATCAAA 52435 .......... .......... .......... .......... .......... .......... 237 GTTTACTAAA TATGAAAGAA AATTGTTAAC TACCTTGTAC AAAATTAGGT GGTGGAAAAT 52495 || || ||||||| .......... .......... .......... .......... ........GT GGAGGAAAAT 249 hqPGS_C08HBa0235H18.1+_SGN-E210726+ (46916 47131) ******************************************************************************** EST sequence 95 +strand 464 n (File: SGN-E201711+) 1 GGAACTAAGA TGGCACGTAT ATGGGGTCGT ACTGGTTGCA ACTTTAATGC TGCAGGCAGA 61 GGTACATGTC AGACTGGTGA TTGTGGTGGA GTCTTACAGT GTACCGGATG GGGCAAACCC 121 CCAAACACCC TAGCCGAGTA CGCCTTGGAC CAGTTTAGCA ACTTAGATTT TTGGGACATT 181 TCTTTAGTCG ATGGATTTAA TATTCCAATG ACTTTTGCCC CAACAAAACC TAGTGGAGGA 241 AAATGTCACG CAATTCATTG CACGGCCAAT ATAAATGGTG AATGTCCTCG CGCCCTTAAG 301 GTACCTGGAG GATGTAACAA CCCTTGTACC ACGTTTGGAG GACAACAATA TTGTTGCACC 361 CAAGGTCCAT GTGGCCCTAC AGAGTTGTCC AAATTTTTCA AGAAAAGATG TCCCGATGCT 421 TATAGCTACC CACAAGACGA TCCTACAAGC ACATTTACTT GCCC Predicted gene structure (within gDNA segment 46293 to 50960): Exon 1 46920 47128 ( 209 n); cDNA 1 209 ( 209 n); score: 0.876 MATCH C08HBa0235H18.1+ SGN-E201711+ 0.876 209 0.450 C PGS_C08HBa0235H18.1+_SGN-E201711+ (46920 47128) Alignment (genomic DNA sequence = upper lines): GGCACTAAGA TGGCACGTAT ATGGGGTCGT ACTAAATGCA ACTTTGACGG TGCTGGTAGA 46979 || ||||||| |||||||||| |||||||||| ||| |||| ||||| | | ||| || ||| GGAACTAAGA TGGCACGTAT ATGGGGTCGT ACTGGTTGCA ACTTTAATGC TGCAGGCAGA 60 GGTTCTTGTG AGACTGGTGA TTGTGGTGGA GTCTTGCAGT GTACCGGGTG GGGTAAACCG 47039 ||| | ||| |||||||||| |||||||||| ||||| |||| ||||||| || ||| ||||| GGTACATGTC AGACTGGTGA TTGTGGTGGA GTCTTACAGT GTACCGGATG GGGCAAACCC 120 CCAAACACCT TGGCCGAATA CGCCTTGAAC CAGTTTAACA ACCTAGATTT CTGGGACATT 47099 ||||||||| | ||||| || ||||||| || ||||||| || || ||||||| ||||||||| CCAAACACCC TAGCCGAGTA CGCCTTGGAC CAGTTTAGCA ACTTAGATTT TTGGGACATT 180 TCTTTAGTCG ATGGATTTAA TCTGCAAAT 47128 |||||||||| |||||||||| | | | ||| TCTTTAGTCG ATGGATTTAA TATTCCAAT 209 hqPGS_C08HBa0235H18.1+_SGN-E201711+ (46920 47128) ******************************************************************************** EST sequence 256 +strand 672 n (File: SGN-E268624+) 1 AACTAAGATG GCACGTATAT GGGGTCGTAC TGGTTGCAAC TTTAATGCTG CAGGCAGAGG 61 TACATGTCAG ACTGGTGATT GTGGTGGAGT CTTACAGTGT ACCGGATGGG GCAAACCCCC 121 AAACACCCTA GCCGAGTACG CCTTGGACCA GTTTAGCAAC TTAGATTTTT GGGACATTTC 181 TTTAGTCGAT GGATTTAATA TTCCAATGAC TTTTGCCCCA ACAAAACCTA GTGGAGGAAA 241 ATGTCACGCA ATTCATTGCA CGGCCAATAT AAATGGTGAA TGTCCTCGCG CCCTTAAGGT 301 ACCTGGAGGA TGTAACAACC CTTGTACCAC GTTTGGAGGA CAACAATATT GTTGCACCCA 361 AGGTCCATGT GGCCCTACAG AGTTGTCCAA ATTTTTCAAG AAAAGATGTC CCGATGCTTA 421 TAGCTACCCA CAAGACGATC CTACAAGCAC ATTTACTTGC CCTGGTGGTA GTACAAACTA 481 TAGGGTTGTC TTTTGTCCTA ATGGTGTTGC TGATCCAAAT TTCCCCTTGG AGATGCCTGC 541 AAGTACTGAT GAAGTGGCCA AGTGAATTTG AGTTTCTTCA TTTTAAATCG CCTCAATTAG 601 TCAACTGATC TCTACCGTAA TGAAAAATCT TAATAGCTCA GTTTTTTAAA TATTCACTTT 661 TACTTTATTG AT Predicted gene structure (within gDNA segment 46313 to 52460): Exon 1 46923 47128 ( 206 n); cDNA 2 207 ( 206 n); score: 0.879 MATCH C08HBa0235H18.1+ SGN-E268624+ 0.879 206 0.307 C PGS_C08HBa0235H18.1+_SGN-E268624+ (46923 47128) Alignment (genomic DNA sequence = upper lines): ACTAAGATGG CACGTATATG GGGTCGTACT AAATGCAACT TTGACGGTGC TGGTAGAGGT 46982 |||||||||| |||||||||| |||||||||| ||||||| || | | ||| || |||||| ACTAAGATGG CACGTATATG GGGTCGTACT GGTTGCAACT TTAATGCTGC AGGCAGAGGT 61 TCTTGTGAGA CTGGTGATTG TGGTGGAGTC TTGCAGTGTA CCGGGTGGGG TAAACCGCCA 47042 | ||| ||| |||||||||| |||||||||| || ||||||| |||| ||||| ||||| ||| ACATGTCAGA CTGGTGATTG TGGTGGAGTC TTACAGTGTA CCGGATGGGG CAAACCCCCA 121 AACACCTTGG CCGAATACGC CTTGAACCAG TTTAACAACC TAGATTTCTG GGACATTTCT 47102 |||||| | | |||| ||||| |||| ||||| |||| |||| ||||||| || |||||||||| AACACCCTAG CCGAGTACGC CTTGGACCAG TTTAGCAACT TAGATTTTTG GGACATTTCT 181 TTAGTCGATG GATTTAATCT GCAAAT 47128 |||||||||| |||||||| | | ||| TTAGTCGATG GATTTAATAT TCCAAT 207 hqPGS_C08HBa0235H18.1+_SGN-E268624+ (46923 47128) ******************************************************************************** EST sequence 591 -strand 667 n (File: SGN-E302617-) 1 GATGGCACGT ATATGGGGTC GTACGAATTG CAACTTTGAT GGTGCTGGTA GAGGTTCATG 61 TCAGACTGGT GATTGTGGTG GGGTCTTGCA ATGTACCGGG TGGGGCAAAC CACCAAACAC 121 CCTGGCCGAG TACGCCTTGG ACCAGTTTAG CAACCTAGAT TTCTGGGACA TTTCTTTAGT 181 CGATGGATTT AATATTCCAA TGACTTTCGC CCCGACCAAT CCTAGTGGAG GGAAATGCCA 241 TGCAATTCAT TGTACGGCTA ATATAAATGG TGAATGTCCT GGTTCACTTA GGGTACCCGG 301 AGGATGTAAC AATCCTTGTA CCACGTTCGG AGGACAACAA TATTGTTGCA CACAAGGTCC 361 ATGTGGCCCT ACTGATTTGT CGAGATTTTT CAAACAAAGA TGTCCTGATG CGTATAGCTA 421 CCCACAAGAT GATCCTACTA GCACATTTAC TTGCCCTAGT GGTAGTACAA ATTATAGGGT 481 TGTTTTTTGT CCTAATGGTG TTACTAGCCC AAATTTCCCC TTGGAGATGC CCTCAAGTGA 541 TGAAGAGGCT AAGTAAAATT GAGTCACTTT CTTTTAAATT GCTTGAAGTA GTCGAGTTAT 601 ATAATTGGCT TGTAATAAAC CTAATATAAT TACATGAATA AAAGTCACAT CATCACAAAA 661 AAAAAAA Predicted gene structure (within gDNA segment 46318 to 52460): Exon 1 46928 47128 ( 201 n); cDNA 1 201 ( 201 n); score: 0.920 PPA cDNA 655 667 MATCH C08HBa0235H18.1+ SGN-E302617- 0.920 201 0.301 C PGS_C08HBa0235H18.1+_SGN-E302617- (46928 47128) Alignment (genomic DNA sequence = upper lines): GATGGCACGT ATATGGGGTC GTACTAAATG CAACTTTGAC GGTGCTGGTA GAGGTTCTTG 46987 |||||||||| |||||||||| |||| || || ||||||||| |||||||||| ||||||| || GATGGCACGT ATATGGGGTC GTACGAATTG CAACTTTGAT GGTGCTGGTA GAGGTTCATG 60 TGAGACTGGT GATTGTGGTG GAGTCTTGCA GTGTACCGGG TGGGGTAAAC CGCCAAACAC 47047 | |||||||| |||||||||| | |||||||| ||||||||| ||||| |||| | |||||||| TCAGACTGGT GATTGTGGTG GGGTCTTGCA ATGTACCGGG TGGGGCAAAC CACCAAACAC 120 CTTGGCCGAA TACGCCTTGA ACCAGTTTAA CAACCTAGAT TTCTGGGACA TTTCTTTAGT 47107 | ||||||| ||||||||| ||||||||| |||||||||| |||||||||| |||||||||| CCTGGCCGAG TACGCCTTGG ACCAGTTTAG CAACCTAGAT TTCTGGGACA TTTCTTTAGT 180 CGATGGATTT AATCTGCAAA T 47128 |||||||||| ||| | | || | CGATGGATTT AATATTCCAA T 201 hqPGS_C08HBa0235H18.1+_SGN-E302617- (46928 47128) ******************************************************************************** EST sequence 19 -strand 493 n (File: SGN-E238858-) 1 TCTATATATC CTTTTGTATT AATAATTTGA ATAAGGCTAT GTTATTCTCC TTGCTAGGAG 61 GATTAATTAC TAAGTCAAGG AAAAATATGA TGTTTTTATT CATCATATAT ATAGTGATAA 121 TATGGAAGTA CTATGTAGTT CCTTAGTTTG TGATGAATAA AAGGAAAATA AAGAATATCT 181 TTATGATGAT TTGGTCAAAA ATCGATACGA AGGATCTGAA ACGCATACAC ATCTGAGTTG 241 ATTGTCTATA ATTACCATTG TTCTTGGAAC TTTTATTTGA CCCCAGGAGC TTACGACTTG 301 CCCTTTAGTA TTTTCATGTT TCTCAGTAAG CTATTTCGTT TTCTTTGGCT GTTTGGGGCG 361 TCCGCGTGGC TGATTCAGAT TTTTTCTGTG TTTTTTCCTG CGGCTTTAGT ATTTGATACT 421 CTGGCTTTTA GCTTGTATTC TTGTTTATTG ACATGCTCTA CTTCTTTTTC GGCTCTAAAA 481 AAAAAAAAAA AAA Predicted gene structure (within gDNA segment 51478 to 47112): Exon 1 50868 50672 ( 197 n); cDNA 1 197 ( 197 n); score: 1.000 Intron 1 50671 50488 ( 184 n); Pd: 0.000 (s: 1.00), Pa: 0.688 (s: 0) Exon 2 50487 50483 ( 5 n); cDNA 198 202 ( 5 n); score: 0.800 PPA cDNA 477 493 MATCH C08HBa0235H18.1- SGN-E238858- 1.000 202 0.410 C PGS_C08HBa0235H18.1-_SGN-E238858- (50868 50672,50487 50483) Alignment (genomic DNA sequence = upper lines): TCTATATATC CTTTTGTATT AATAATTTGA ATAAGGCTAT GTTATTCTCC TTGCTAGGAG 50809 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTATATATC CTTTTGTATT AATAATTTGA ATAAGGCTAT GTTATTCTCC TTGCTAGGAG 60 GATTAATTAC TAAGTCAAGG AAAAATATGA TGTTTTTATT CATCATATAT ATAGTGATAA 50749 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATTAATTAC TAAGTCAAGG AAAAATATGA TGTTTTTATT CATCATATAT ATAGTGATAA 120 TATGGAAGTA CTATGTAGTT CCTTAGTTTG TGATGAATAA AAGGAAAATA AAGAATATCT 50689 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATGGAAGTA CTATGTAGTT CCTTAGTTTG TGATGAATAA AAGGAAAATA AAGAATATCT 180 TTATGATGAT TTGGTCACTT TTAAGTTTCC CTCAAGGTTT AAGTTAATAG CTTTTGACGA 50629 |||||||||| ||||||| TTATGATGAT TTGGTCA... .......... .......... .......... .......... 197 GATGAGTATG AAGATGCATG GTATTGAGTC TGATCCGTCT TTCACCCTCT ATGAAAAGCT 50569 .......... .......... .......... .......... .......... .......... 197 AGACAAAAAT TAATAATAAT AGGAGCTTGC ATTATATATG GACTTCGATG ATCATAAATA 50509 .......... .......... .......... .......... .......... .......... 197 TTTGAAAACT ATACGTGACA GATAAT 50483 | ||| .......... .......... .AAAAT 202 hqPGS_C08HBa0235H18.1-_SGN-E238858- (50868 50672,50487 50483) ******************************************************************************** EST sequence 20 -strand 368 n (File: SGN-E239367-) 1 AAGTACTATG TAGTTCCTTA GTTTGTGATG AATAAAAGGA AAATAAAGAA TATCTTTATG 61 ATGATTTGGT CAAAAATCGA TACGAAGGAT CTGAAACGCA TACACATCTG AGTTGATTGT 121 CTATAATTAC CATTGTTCTT GGAACTTTTA TTTGACCCCA GGAGCTTACG ACTTGCCCTT 181 TAGTATTTTC ATGTTTCTCA GTAAGCTATT TCGTTTTCTT TGGCTGTTTG GGGCGTCCGC 241 GTGGCTGATT CAGATTTTTT CTGTGTTTTT TCCTACGGCT TTAGTATTTG ATACTCTGGC 301 TTTTAGCTTG TATTCTTGTT TATTGACATG CTCTACTTCT TTTTCGGCTC TAAAAAAAAA 361 AAAAAAAA Predicted gene structure (within gDNA segment 51353 to 47112): Exon 1 50743 50672 ( 72 n); cDNA 1 72 ( 72 n); score: 1.000 Intron 1 50671 50488 ( 184 n); Pd: 0.000 (s: 1.00), Pa: 0.688 (s: 0) Exon 2 50487 50483 ( 5 n); cDNA 73 77 ( 5 n); score: 0.800 PPA cDNA 352 368 MATCH C08HBa0235H18.1- SGN-E239367- 1.000 77 0.209 C PGS_C08HBa0235H18.1-_SGN-E239367- (50743 50672,50487 50483) Alignment (genomic DNA sequence = upper lines): AAGTACTATG TAGTTCCTTA GTTTGTGATG AATAAAAGGA AAATAAAGAA TATCTTTATG 50684 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTACTATG TAGTTCCTTA GTTTGTGATG AATAAAAGGA AAATAAAGAA TATCTTTATG 60 ATGATTTGGT CACTTTTAAG TTTCCCTCAA GGTTTAAGTT AATAGCTTTT GACGAGATGA 50624 |||||||||| || ATGATTTGGT CA........ .......... .......... .......... .......... 72 GTATGAAGAT GCATGGTATT GAGTCTGATC CGTCTTTCAC CCTCTATGAA AAGCTAGACA 50564 .......... .......... .......... .......... .......... .......... 72 AAAATTAATA ATAATAGGAG CTTGCATTAT ATATGGACTT CGATGATCAT AAATATTTGA 50504 .......... .......... .......... .......... .......... .......... 72 AAACTATACG TGACAGATAA T 50483 | || | .......... ......AAAA T 77 hqPGS_C08HBa0235H18.1-_SGN-E239367- (50743 50672,50487 50483) ******************************************************************************** EST sequence 758 +strand 729 n (File: SGN-E341860+) 1 ATTTATTAGT AGTCACACAA AAAATAAAAA TATGAAAACT TCAATTTTTA TTCTCTTTTC 61 CCTTTTTTTC ACCTATGCCA ATGCAGCCAC AATTTTAGTT CGTAACAATT GTCCCTACAC 121 CGTTTGGGCT GCCGGAGTCC CAGCCGGAGG CGGCAAACGC CTCGATCGTG GCCAAACGTG 181 GACGATAAAC GCCCCTCCGG GGACTAAACA AGCTCGAGTT TGGGGCCGTA CCGGATGCAA 241 TTTCGATGCA TCCGGTAAGG GAAAATGCCA AACTGGAGAT TGTAATGGTC TTCTTGTATG 301 TAAATCTTTT GGTGTACCAC CAAATACATT AGCTGAATAT GCCCTAAACC AATTTGCAAA 361 TAAAGATTTT TTCGATATTT CTCTTGTCGA TGGATTTAAT GTTCCTATGG AATTTAGTCC 421 AACTTCCAAT GGGTGCACCC GTGGCATAAC GTGTAAAGCG GAAATTAATC AACAATGTCC 481 TAATGAATTG AAAGCTCCCG GAGGATGTAA CAACCCTTGT ACTGTTTTTA AGACTGATCA 541 ATATTTGTTG TAACTCTGGT AANCTGTGGT CCGACTAAAT TTTCGAGATT TTTTAAGGGA 601 GAGGTGTCCT GATGCATATA GTTACCCTAA GGATGATCAA ACTAGTACTT TCACTTGCCC 661 TGCTGGTACT AATTATAGGG TTGTANTTCT GTCCTTAAAT ATCTATCTGC CTATCTATAT 721 ATCCCTTTT Predicted gene structure (within gDNA segment 52177 to 50198): Exon 1 51577 50854 ( 724 n); cDNA 1 728 ( 728 n); score: 0.985 MATCH C08HBa0235H18.1- SGN-E341860+ 0.985 724 0.993 C PGS_C08HBa0235H18.1-_SGN-E341860+ (51577 50854) Alignment (genomic DNA sequence = upper lines): ATTTATTAGT AGTCACACAA AAAATAAAAA TATGAAAACT TCAATTTTTA TTCTCTTTTC 51518 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTATTAGT AGTCACACAA AAAATAAAAA TATGAAAACT TCAATTTTTA TTCTCTTTTC 60 CCTTTTTTTC ACCTATGCCA ATGCAGCCAC AATTTTAGTT CGTAACAATT GTCCCTACAC 51458 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTTTTTTC ACCTATGCCA ATGCAGCCAC AATTTTAGTT CGTAACAATT GTCCCTACAC 120 CGTTTGGGCT GCCGGAGTCC CAGCCGGAGG CGGCAAACGC CTCGATCGTG GCCAAACGTG 51398 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTTGGGCT GCCGGAGTCC CAGCCGGAGG CGGCAAACGC CTCGATCGTG GCCAAACGTG 180 GACGATAAAC GCCCCTCCGG GGACTAAACA AGCTCGAGTT TGGGGCCGTA CCGGATGCAA 51338 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACGATAAAC GCCCCTCCGG GGACTAAACA AGCTCGAGTT TGGGGCCGTA CCGGATGCAA 240 TTTCGATGCA TCCGGTAAGG GAAAATGCCA AACTGGAGAT TGTAATGGTC TTCTTGTATG 51278 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCGATGCA TCCGGTAAGG GAAAATGCCA AACTGGAGAT TGTAATGGTC TTCTTGTATG 300 TAAATCTTTT GGTGTACCAC CAAATACATT AGCTGAATAT GCCCTAAACC AATTTGCAAA 51218 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAATCTTTT GGTGTACCAC CAAATACATT AGCTGAATAT GCCCTAAACC AATTTGCAAA 360 TAAAGATTTT TTCGATATTT CTCTTGTCGA TGGATTTAAT GTTCCTATGG AATTTAGTCC 51158 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAGATTTT TTCGATATTT CTCTTGTCGA TGGATTTAAT GTTCCTATGG AATTTAGTCC 420 AACTTCCAAT GGGTGCACCC GTGGCATAAC GTGTAAAGCG GAAATTAATC AACAATGTCC 51098 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACTTCCAAT GGGTGCACCC GTGGCATAAC GTGTAAAGCG GAAATTAATC AACAATGTCC 480 TAATGAATTG AAAGCTCCCG GAGGATGTAA CAACCCTTGT ACTGTTTTTA AGACTGATCA 51038 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATGAATTG AAAGCTCCCG GAGGATGTAA CAACCCTTGT ACTGTTTTTA AGACTGATCA 540 ATA-TTGTTG TAACTCTGGT AA-CTGTGGT CCGACTAAAT TTTCGAGATT TTTTAA-GGA 50981 ||| |||||| |||||||||| || ||||||| |||||||||| |||||||||| |||||| ||| ATATTTGTTG TAACTCTGGT AANCTGTGGT CCGACTAAAT TTTCGAGATT TTTTAAGGGA 600 GAGGTGTCCT GATGCATATA GTTACCCTAA GGATGATCAA ACTAGTACTT TCACTTGCCC 50921 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGGTGTCCT GATGCATATA GTTACCCTAA GGATGATCAA ACTAGTACTT TCACTTGCCC 660 TGCTGGTACT AATTATAGGG TTGTA-TTCT GTCCTTAAAT ATCTATCTGC CTATCTATAT 50862 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| TGCTGGTACT AATTATAGGG TTGTANTTCT GTCCTTAAAT ATCTATCTGC CTATCTATAT 720 ATCCTTTT 50854 |||| ||| ATCCCTTT 728 hqPGS_C08HBa0235H18.1-_SGN-E341860+ (51577 50854) ******************************************************************************** EST sequence 490 +strand 719 n (File: SGN-E348822+) 1 ATTTATTAGT AGTCACACAA AAAATAAAAA TATGAAAACT TCAATTTTTA TTCTCTTTTC 61 CCTTTTTTTC ACCTATGCCA ATGCAGCCAC AATTTTAGTT CGTAACAATT GTCCCTACAC 121 CGTTTGGGCT GCCGGAGTCC CAGCCGGAGG CGGCAAACGC CTCGATCGTG GCCAAACGTG 181 GACGATAAAC GCCCCTCCGG GGACTAAACA AGCTCGAGTT TGGGGCCGTA CCGGATGCAA 241 TTTCGATGCA TCCGGTAAGG GAAAATGCCA AACTGGAGAT TGTAATGGTC TTCTTGTATG 301 TAAATCTTTT GGTGTACCAC CAAATACATT AGCTGAATAT GCCCTAAACC AATTTGCAAA 361 TAAAGATTTT TTCGATATTT CTCTTGTCGA TGGATTTAAT GTTCCTATGG AATTTAGTCC 421 AACTTCCAAT GGGTGCACCC GTGGCATAAC GTGTAAAGCG GAAATTAATC AACAATGTCC 481 TAATGAATTG AAAGCTCCCG GAGGATGTAA CAACCCTTGT ACTGTTTTTA AGACTGATCA 541 ATANTTGTTG TACCTCTGGT AACCTGTGGT CCGACTAAAT TTTCGAGATT TTTTAGGGAG 601 AAGGTGTCCT GATGCATATA GTTACCCTAA GGATGATCNA ACTAGTACTT TCACTTGCCC 661 TGCTGGTACT AATATAAGGG TTGTATTCTG TCCTTAAATA TCTATCTGCC TATCTATAT Predicted gene structure (within gDNA segment 52177 to 50252): Exon 1 51577 50864 ( 714 n); cDNA 1 717 ( 717 n); score: 0.981 MATCH C08HBa0235H18.1- SGN-E348822+ 0.981 714 0.993 C PGS_C08HBa0235H18.1-_SGN-E348822+ (51577 50864) Alignment (genomic DNA sequence = upper lines): ATTTATTAGT AGTCACACAA AAAATAAAAA TATGAAAACT TCAATTTTTA TTCTCTTTTC 51518 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTATTAGT AGTCACACAA AAAATAAAAA TATGAAAACT TCAATTTTTA TTCTCTTTTC 60 CCTTTTTTTC ACCTATGCCA ATGCAGCCAC AATTTTAGTT CGTAACAATT GTCCCTACAC 51458 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTTTTTTC ACCTATGCCA ATGCAGCCAC AATTTTAGTT CGTAACAATT GTCCCTACAC 120 CGTTTGGGCT GCCGGAGTCC CAGCCGGAGG CGGCAAACGC CTCGATCGTG GCCAAACGTG 51398 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTTGGGCT GCCGGAGTCC CAGCCGGAGG CGGCAAACGC CTCGATCGTG GCCAAACGTG 180 GACGATAAAC GCCCCTCCGG GGACTAAACA AGCTCGAGTT TGGGGCCGTA CCGGATGCAA 51338 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACGATAAAC GCCCCTCCGG GGACTAAACA AGCTCGAGTT TGGGGCCGTA CCGGATGCAA 240 TTTCGATGCA TCCGGTAAGG GAAAATGCCA AACTGGAGAT TGTAATGGTC TTCTTGTATG 51278 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCGATGCA TCCGGTAAGG GAAAATGCCA AACTGGAGAT TGTAATGGTC TTCTTGTATG 300 TAAATCTTTT GGTGTACCAC CAAATACATT AGCTGAATAT GCCCTAAACC AATTTGCAAA 51218 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAATCTTTT GGTGTACCAC CAAATACATT AGCTGAATAT GCCCTAAACC AATTTGCAAA 360 TAAAGATTTT TTCGATATTT CTCTTGTCGA TGGATTTAAT GTTCCTATGG AATTTAGTCC 51158 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAGATTTT TTCGATATTT CTCTTGTCGA TGGATTTAAT GTTCCTATGG AATTTAGTCC 420 AACTTCCAAT GGGTGCACCC GTGGCATAAC GTGTAAAGCG GAAATTAATC AACAATGTCC 51098 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACTTCCAAT GGGTGCACCC GTGGCATAAC GTGTAAAGCG GAAATTAATC AACAATGTCC 480 TAATGAATTG AAAGCTCCCG GAGGATGTAA CAACCCTTGT ACTGTTTTTA AGACTGATCA 51038 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATGAATTG AAAGCTCCCG GAGGATGTAA CAACCCTTGT ACTGTTTTTA AGACTGATCA 540 ATA-TTGTTG TAACTCTGGT AA-CTGTGGT CCGACTAAAT TTTCGAGATT TTTTAAGGAG 50980 ||| |||||| || ||||||| || ||||||| |||||||||| |||||||||| ||||| |||| ATANTTGTTG TACCTCTGGT AACCTGTGGT CCGACTAAAT TTTCGAGATT TTTTAGGGAG 600 -AGGTGTCCT GATGCATATA GTTACCCTAA GGATGATCAA ACTAGTACTT TCACTTGCCC 50921 ||||||||| |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| AAGGTGTCCT GATGCATATA GTTACCCTAA GGATGATCNA ACTAGTACTT TCACTTGCCC 660 TGCTGGTACT AATTATAGGG TTGTATTCTG TCCTTAAATA TCTATCTGCC TATCTAT 50864 |||||||||| ||| |||| |||||||||| |||||||||| |||||||||| ||||||| TGCTGGTACT AATATAAGGG TTGTATTCTG TCCTTAAATA TCTATCTGCC TATCTAT 717 hqPGS_C08HBa0235H18.1-_SGN-E348822+ (51577 50864) ******************************************************************************** EST sequence 759 +strand 673 n (File: SGN-E341907+) 1 ATTTATTAGT AGTCACACAA AAAATAAAAA TATGAAAACT TCAATTTTTA TTCTCTTTTC 61 CCTTTTTTTC ACCTATGCCA ATGCAGCCAC AATTTTAGTT CGTAACAATT GTCCCTACAC 121 CGTTTGGGCT GCCGGAGTCC CAGCCGGAGG CGGCAAACGC CTCGATCGTG GCCAAACGTG 181 GACGATAAAC GCCCCTCCGG GGACTAAACA AGCTCGAGTT TGGGGCCGTA CCGGATGCAA 241 TTTCGATGCA TCCGGTAAGG GAAAATGCCA AACTGGAGAT TGTAATGGTC TTCTTGTATG 301 TAAATCTTTT GGTGTACCAC CAAATACATT AGCTGAATAT GCCCTAAACC AATTTGCAAA 361 TAAAGATTTT TTCGATATTT CTCTTGTCGA TGGATTTAAT GTTCCTATGG AATTTAGTCC 421 AACTTCCAAT GGGTGCACCC GTGGCATAAC GTGTAAAGCG GAAATTAATC AACAATGTCC 481 TAATGAATTG AAAGCTCCCG GAGGATGTAA CAACCCTTGT ACTGTTTTTA AGACTGATCA 541 ATATTGTTGT AACTCTGGTA ACTGTGGTCC GACTAAATTT TCGAGATTTT TAAGGAGAAG 601 TGTCCTGATG CATTATAGTT ACCCTAAGGA TGATCAAACT AGTACTTTCA CTTGCCCTGC 661 TGGTACTAAT TAT Predicted gene structure (within gDNA segment 52177 to 50295): Exon 1 51577 50905 ( 673 n); cDNA 1 673 ( 673 n); score: 0.993 MATCH C08HBa0235H18.1- SGN-E341907+ 0.993 673 1.000 C PGS_C08HBa0235H18.1-_SGN-E341907+ (51577 50905) Alignment (genomic DNA sequence = upper lines): ATTTATTAGT AGTCACACAA AAAATAAAAA TATGAAAACT TCAATTTTTA TTCTCTTTTC 51518 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTATTAGT AGTCACACAA AAAATAAAAA TATGAAAACT TCAATTTTTA TTCTCTTTTC 60 CCTTTTTTTC ACCTATGCCA ATGCAGCCAC AATTTTAGTT CGTAACAATT GTCCCTACAC 51458 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTTTTTTC ACCTATGCCA ATGCAGCCAC AATTTTAGTT CGTAACAATT GTCCCTACAC 120 CGTTTGGGCT GCCGGAGTCC CAGCCGGAGG CGGCAAACGC CTCGATCGTG GCCAAACGTG 51398 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTTGGGCT GCCGGAGTCC CAGCCGGAGG CGGCAAACGC CTCGATCGTG GCCAAACGTG 180 GACGATAAAC GCCCCTCCGG GGACTAAACA AGCTCGAGTT TGGGGCCGTA CCGGATGCAA 51338 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACGATAAAC GCCCCTCCGG GGACTAAACA AGCTCGAGTT TGGGGCCGTA CCGGATGCAA 240 TTTCGATGCA TCCGGTAAGG GAAAATGCCA AACTGGAGAT TGTAATGGTC TTCTTGTATG 51278 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCGATGCA TCCGGTAAGG GAAAATGCCA AACTGGAGAT TGTAATGGTC TTCTTGTATG 300 TAAATCTTTT GGTGTACCAC CAAATACATT AGCTGAATAT GCCCTAAACC AATTTGCAAA 51218 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAATCTTTT GGTGTACCAC CAAATACATT AGCTGAATAT GCCCTAAACC AATTTGCAAA 360 TAAAGATTTT TTCGATATTT CTCTTGTCGA TGGATTTAAT GTTCCTATGG AATTTAGTCC 51158 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAGATTTT TTCGATATTT CTCTTGTCGA TGGATTTAAT GTTCCTATGG AATTTAGTCC 420 AACTTCCAAT GGGTGCACCC GTGGCATAAC GTGTAAAGCG GAAATTAATC AACAATGTCC 51098 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACTTCCAAT GGGTGCACCC GTGGCATAAC GTGTAAAGCG GAAATTAATC AACAATGTCC 480 TAATGAATTG AAAGCTCCCG GAGGATGTAA CAACCCTTGT ACTGTTTTTA AGACTGATCA 51038 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATGAATTG AAAGCTCCCG GAGGATGTAA CAACCCTTGT ACTGTTTTTA AGACTGATCA 540 ATATTGTTGT AACTCTGGTA ACTGTGGTCC GACTAAATTT TCGAGATTTT TTAAGGAGAG 50978 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| ||||||||| ATATTGTTGT AACTCTGGTA ACTGTGGTCC GACTAAATTT TCGAGA-TTT TTAAGGAGAA 599 GTGTCCTGAT GCA-TATAGT TACCCTAAGG ATGATCAAAC TAGTACTTTC ACTTGCCCTG 50919 |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGTCCTGAT GCATTATAGT TACCCTAAGG ATGATCAAAC TAGTACTTTC ACTTGCCCTG 659 CTGGTACTAA TTAT 50905 |||||||||| |||| CTGGTACTAA TTAT 673 hqPGS_C08HBa0235H18.1-_SGN-E341907+ (51577 50905) ******************************************************************************** EST sequence 781 +strand 668 n (File: SGN-E341709+) 1 ATTTATTAGT AGTCACACAA AAAATAAAAA TATGAAAACT TCAATTTTTA TTCTCTTTTC 61 CCTTTTTTTC ACCTATGCCA ATGCAGCCAC AATTTTAGTT CGTAACAATT GTCCCTACAC 121 CGTTTGGGCT GCCGGAGTCC CAGCCGGAGG CGGCAAACGC CTCGATCGTG GCCAAACGTG 181 GACGATAAAC GCCCCTCCGG GGACTAAACA AGCTCGAGTT TGGGGCCGTA CCGGATGCAA 241 TTTCGATGCA TCCGGTAAGG GAAAATGCCA AACTGGAGAT TGTAATGGTC TTCTTGTATG 301 TAAATCTTTT GGTGTACCAC CAAATACATT ATCTGAATAT GCCCTAAACC AATTTGCAAA 361 TAAAGATTTT TTCGATATTT CTCTTGTCGA TGGATTTAAT GTTCCTATGG AATTTAGTCC 421 AACTTCCAAT GGGTGCACCC GTGGCATAAC GTGTAAAGCG GAAATTAATC AACAATGTCC 481 TAATGAATTG AAAGCTCCCG GAGGATGTAA CAACCCTTGT ACTGTTTTTA AGACTGATCA 541 ATATTGCTGT AACTCTGGTA ACTGTGGTCC GACTAAATTT TCGAGATTTT ATAAGGAGAG 601 GTGTCCTGAT GCATATAGTT ACCCCTAGGA TGATCAAACT AGTACGTTCA CTTGCCCTGC 661 TGGTACTA Predicted gene structure (within gDNA segment 52177 to 50300): Exon 1 51577 50910 ( 668 n); cDNA 1 668 ( 668 n); score: 0.991 MATCH C08HBa0235H18.1- SGN-E341709+ 0.991 668 1.000 C PGS_C08HBa0235H18.1-_SGN-E341709+ (51577 50910) Alignment (genomic DNA sequence = upper lines): ATTTATTAGT AGTCACACAA AAAATAAAAA TATGAAAACT TCAATTTTTA TTCTCTTTTC 51518 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTATTAGT AGTCACACAA AAAATAAAAA TATGAAAACT TCAATTTTTA TTCTCTTTTC 60 CCTTTTTTTC ACCTATGCCA ATGCAGCCAC AATTTTAGTT CGTAACAATT GTCCCTACAC 51458 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTTTTTTC ACCTATGCCA ATGCAGCCAC AATTTTAGTT CGTAACAATT GTCCCTACAC 120 CGTTTGGGCT GCCGGAGTCC CAGCCGGAGG CGGCAAACGC CTCGATCGTG GCCAAACGTG 51398 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTTGGGCT GCCGGAGTCC CAGCCGGAGG CGGCAAACGC CTCGATCGTG GCCAAACGTG 180 GACGATAAAC GCCCCTCCGG GGACTAAACA AGCTCGAGTT TGGGGCCGTA CCGGATGCAA 51338 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACGATAAAC GCCCCTCCGG GGACTAAACA AGCTCGAGTT TGGGGCCGTA CCGGATGCAA 240 TTTCGATGCA TCCGGTAAGG GAAAATGCCA AACTGGAGAT TGTAATGGTC TTCTTGTATG 51278 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCGATGCA TCCGGTAAGG GAAAATGCCA AACTGGAGAT TGTAATGGTC TTCTTGTATG 300 TAAATCTTTT GGTGTACCAC CAAATACATT AGCTGAATAT GCCCTAAACC AATTTGCAAA 51218 |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| TAAATCTTTT GGTGTACCAC CAAATACATT ATCTGAATAT GCCCTAAACC AATTTGCAAA 360 TAAAGATTTT TTCGATATTT CTCTTGTCGA TGGATTTAAT GTTCCTATGG AATTTAGTCC 51158 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAGATTTT TTCGATATTT CTCTTGTCGA TGGATTTAAT GTTCCTATGG AATTTAGTCC 420 AACTTCCAAT GGGTGCACCC GTGGCATAAC GTGTAAAGCG GAAATTAATC AACAATGTCC 51098 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACTTCCAAT GGGTGCACCC GTGGCATAAC GTGTAAAGCG GAAATTAATC AACAATGTCC 480 TAATGAATTG AAAGCTCCCG GAGGATGTAA CAACCCTTGT ACTGTTTTTA AGACTGATCA 51038 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATGAATTG AAAGCTCCCG GAGGATGTAA CAACCCTTGT ACTGTTTTTA AGACTGATCA 540 ATATTGTTGT AACTCTGGTA ACTGTGGTCC GACTAAATTT TCGAGATTTT TTAAGGAGAG 50978 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| ATATTGCTGT AACTCTGGTA ACTGTGGTCC GACTAAATTT TCGAGATTTT ATAAGGAGAG 600 GTGTCCTGAT GCATATAGTT ACCCTAAGGA TGATCAAACT AGTACTTTCA CTTGCCCTGC 50918 |||||||||| |||||||||| |||| |||| |||||||||| ||||| |||| |||||||||| GTGTCCTGAT GCATATAGTT ACCCCTAGGA TGATCAAACT AGTACGTTCA CTTGCCCTGC 660 TGGTACTA 50910 |||||||| TGGTACTA 668 hqPGS_C08HBa0235H18.1-_SGN-E341709+ (51577 50910) ******************************************************************************** EST sequence 552 +strand 390 n (File: SGN-E200127+) 1 GCACGAGATT TATTAGTAGT CACACAAAAA ATAAAAATAT GAAAACTTCA ATTTTTATTC 61 TCTTTTCCCT TTTTTTCACC TATGCCAATG CAGCCACAAT TTTAGTTCGT AACAATTGTC 121 CCTACACCGT TTGGGCTGCC GGAGTCCCAG CCGGAGGCGG CAAACGCCTC GATCGTGGCC 181 AAACGTGGAC GATAAACGCC CCTCCGGGGA CTAAACAAGC TCGAGTTTGG GGCCGTACCG 241 GATGCAATTT CGATGCATCC GGTAAGGGAA AATGCCAAAC TGGAGATTGT AATGGTCTTC 301 TTGTATGTAA ATCTTTTGGT GTACCACCAA ATACATTAGC TGAATATGCC CTAAACCAAT 361 TTGCAAATAA AGATTTTTTC GATATTTCTC Predicted gene structure (within gDNA segment 52247 to 50585): Exon 1 51577 51195 ( 383 n); cDNA 8 390 ( 383 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E200127+ 1.000 383 0.982 C PGS_C08HBa0235H18.1-_SGN-E200127+ (51577 51195) Alignment (genomic DNA sequence = upper lines): ATTTATTAGT AGTCACACAA AAAATAAAAA TATGAAAACT TCAATTTTTA TTCTCTTTTC 51518 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTATTAGT AGTCACACAA AAAATAAAAA TATGAAAACT TCAATTTTTA TTCTCTTTTC 67 CCTTTTTTTC ACCTATGCCA ATGCAGCCAC AATTTTAGTT CGTAACAATT GTCCCTACAC 51458 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTTTTTTC ACCTATGCCA ATGCAGCCAC AATTTTAGTT CGTAACAATT GTCCCTACAC 127 CGTTTGGGCT GCCGGAGTCC CAGCCGGAGG CGGCAAACGC CTCGATCGTG GCCAAACGTG 51398 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTTGGGCT GCCGGAGTCC CAGCCGGAGG CGGCAAACGC CTCGATCGTG GCCAAACGTG 187 GACGATAAAC GCCCCTCCGG GGACTAAACA AGCTCGAGTT TGGGGCCGTA CCGGATGCAA 51338 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACGATAAAC GCCCCTCCGG GGACTAAACA AGCTCGAGTT TGGGGCCGTA CCGGATGCAA 247 TTTCGATGCA TCCGGTAAGG GAAAATGCCA AACTGGAGAT TGTAATGGTC TTCTTGTATG 51278 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCGATGCA TCCGGTAAGG GAAAATGCCA AACTGGAGAT TGTAATGGTC TTCTTGTATG 307 TAAATCTTTT GGTGTACCAC CAAATACATT AGCTGAATAT GCCCTAAACC AATTTGCAAA 51218 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAATCTTTT GGTGTACCAC CAAATACATT AGCTGAATAT GCCCTAAACC AATTTGCAAA 367 TAAAGATTTT TTCGATATTT CTC 51195 |||||||||| |||||||||| ||| TAAAGATTTT TTCGATATTT CTC 390 hqPGS_C08HBa0235H18.1-_SGN-E200127+ (51577 51195) ******************************************************************************** EST sequence 522 +strand 385 n (File: SGN-E340163+) 1 TTAGTAGTCA CACAAAAAAT AAAAATATGA AAACTTCAAT TTTTATTCTC TTTTCCCTTT 61 TTTTCACCTA TGCCAATGCA GCCACAATTT TAGTTCGTAA CAATTGTCCC TACACCGTTT 121 GGGCTGCCGG AGTCCCAGCC GGAGGCGGCA AACGCCTCGA TCGTGGCCAA ACGTGGACGA 181 TAAACGCCCC TCCGGGGACT AAACAAGCTC GAGTTTGGGG CCGTACCGGA TGCAATTTCG 241 ATGCATCCGG TAAGGGAAAA TGCCAAACTG GAGATTGTAA TGGTCTTCTT GTATGTAAAT 301 CTTTTGGTGT ACCACCAAAT ACATTAGCTG AATATGCCCT AAACCAATTT GCAAATAAAG 361 AATATCTTTA TGATGAAAAA AAAAA Predicted gene structure (within gDNA segment 52172 to 50362): Exon 1 51572 51213 ( 360 n); cDNA 1 360 ( 360 n); score: 1.000 PPA cDNA 376 385 MATCH C08HBa0235H18.1- SGN-E340163+ 1.000 360 0.935 C PGS_C08HBa0235H18.1-_SGN-E340163+ (51572 51213) Alignment (genomic DNA sequence = upper lines): TTAGTAGTCA CACAAAAAAT AAAAATATGA AAACTTCAAT TTTTATTCTC TTTTCCCTTT 51513 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAGTAGTCA CACAAAAAAT AAAAATATGA AAACTTCAAT TTTTATTCTC TTTTCCCTTT 60 TTTTCACCTA TGCCAATGCA GCCACAATTT TAGTTCGTAA CAATTGTCCC TACACCGTTT 51453 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTCACCTA TGCCAATGCA GCCACAATTT TAGTTCGTAA CAATTGTCCC TACACCGTTT 120 GGGCTGCCGG AGTCCCAGCC GGAGGCGGCA AACGCCTCGA TCGTGGCCAA ACGTGGACGA 51393 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGCTGCCGG AGTCCCAGCC GGAGGCGGCA AACGCCTCGA TCGTGGCCAA ACGTGGACGA 180 TAAACGCCCC TCCGGGGACT AAACAAGCTC GAGTTTGGGG CCGTACCGGA TGCAATTTCG 51333 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAACGCCCC TCCGGGGACT AAACAAGCTC GAGTTTGGGG CCGTACCGGA TGCAATTTCG 240 ATGCATCCGG TAAGGGAAAA TGCCAAACTG GAGATTGTAA TGGTCTTCTT GTATGTAAAT 51273 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGCATCCGG TAAGGGAAAA TGCCAAACTG GAGATTGTAA TGGTCTTCTT GTATGTAAAT 300 CTTTTGGTGT ACCACCAAAT ACATTAGCTG AATATGCCCT AAACCAATTT GCAAATAAAG 51213 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTTGGTGT ACCACCAAAT ACATTAGCTG AATATGCCCT AAACCAATTT GCAAATAAAG 360 hqPGS_C08HBa0235H18.1-_SGN-E340163+ (51572 51213) ******************************************************************************** EST sequence 1038 +strand 385 n (File: SGN-E344592+) 1 TTAGTAGTCA CACAAAAAAT AAAAATATGA AAACTTCAAT TTTTATTCTC TTTTCCCTTT 61 TTTTCACCTA TGCCAATGCA GCCACAATTT TAGTTCGTAA CAATTGTCCC TACACCGTTT 121 GGGCTGCCGG AGTCCCAGCC GGAGGCGGCA AACGCCTCGA TCGTGGCCAA ACGTGGACGA 181 TAAACGCCCC TCCGGGGACT AAACAAGCTC GAGTTTGGGG CCGTACCGGA TGCAATTTCG 241 ATGCATCCGG TAAGGGAAAA TGCCAAACTG GAGATTGTAA TGGTCTTCTT GTATGTAAAT 301 CTTTTGGTGT ACCACCAAAT ACATTAGCTG AATATGCCCT AAACCAATTT GCAAATAAAG 361 AATATCTTTA TGATGAAAAA AAAAA Predicted gene structure (within gDNA segment 52172 to 50362): Exon 1 51572 51213 ( 360 n); cDNA 1 360 ( 360 n); score: 1.000 PPA cDNA 376 385 MATCH C08HBa0235H18.1- SGN-E344592+ 1.000 360 0.935 C PGS_C08HBa0235H18.1-_SGN-E344592+ (51572 51213) Alignment (genomic DNA sequence = upper lines): TTAGTAGTCA CACAAAAAAT AAAAATATGA AAACTTCAAT TTTTATTCTC TTTTCCCTTT 51513 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAGTAGTCA CACAAAAAAT AAAAATATGA AAACTTCAAT TTTTATTCTC TTTTCCCTTT 60 TTTTCACCTA TGCCAATGCA GCCACAATTT TAGTTCGTAA CAATTGTCCC TACACCGTTT 51453 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTCACCTA TGCCAATGCA GCCACAATTT TAGTTCGTAA CAATTGTCCC TACACCGTTT 120 GGGCTGCCGG AGTCCCAGCC GGAGGCGGCA AACGCCTCGA TCGTGGCCAA ACGTGGACGA 51393 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGCTGCCGG AGTCCCAGCC GGAGGCGGCA AACGCCTCGA TCGTGGCCAA ACGTGGACGA 180 TAAACGCCCC TCCGGGGACT AAACAAGCTC GAGTTTGGGG CCGTACCGGA TGCAATTTCG 51333 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAACGCCCC TCCGGGGACT AAACAAGCTC GAGTTTGGGG CCGTACCGGA TGCAATTTCG 240 ATGCATCCGG TAAGGGAAAA TGCCAAACTG GAGATTGTAA TGGTCTTCTT GTATGTAAAT 51273 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGCATCCGG TAAGGGAAAA TGCCAAACTG GAGATTGTAA TGGTCTTCTT GTATGTAAAT 300 CTTTTGGTGT ACCACCAAAT ACATTAGCTG AATATGCCCT AAACCAATTT GCAAATAAAG 51213 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTTGGTGT ACCACCAAAT ACATTAGCTG AATATGCCCT AAACCAATTT GCAAATAAAG 360 hqPGS_C08HBa0235H18.1-_SGN-E344592+ (51572 51213) ******************************************************************************** EST sequence 1124 -strand 230 n (File: SGN-E232530-) 1 TATATATGAC AAACATGTAA ACTTGATTAG GGTAAAATTC TCGTTTCAAT TCTATGTGGA 61 TGTACACTCC GAAAAACTGT TTTTCCCTGT CCTATTTCAG AAGTCTAGGA TTGGTTTTGT 121 AAATATGCAT TTTAACTCAA TTTCACATCT GTTCAAAAAA TGCGTTCCTA GTGTTTCTGC 181 CATGGATAAA TAAGGTGAAA AATAGTTCCA GTCAAAAAAA AAAAAAAAAA Predicted gene structure (within gDNA segment 61497 to 63197): Exon 1 62107 62300 ( 194 n); cDNA 1 194 ( 194 n); score: 0.995 PPA cDNA 214 230 MATCH C08HBa0235H18.1+ SGN-E232530- 0.995 194 0.843 C PGS_C08HBa0235H18.1+_SGN-E232530- (62107 62300) Alignment (genomic DNA sequence = upper lines): TATATATGAC AAACATGTAA ACTTGATTAG GGTAAGATTC TCGTTTCAAT TCTATGTGGA 62166 |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| TATATATGAC AAACATGTAA ACTTGATTAG GGTAAAATTC TCGTTTCAAT TCTATGTGGA 60 TGTACACTCC GAAAAACTGT TTTTCCCTGT CCTATTTCAG AAGTCTAGGA TTGGTTTTGT 62226 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTACACTCC GAAAAACTGT TTTTCCCTGT CCTATTTCAG AAGTCTAGGA TTGGTTTTGT 120 AAATATGCAT TTTAACTCAA TTTCACATCT GTTCAAAAAA TGCGTTCCTA GTGTTTCTGC 62286 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATATGCAT TTTAACTCAA TTTCACATCT GTTCAAAAAA TGCGTTCCTA GTGTTTCTGC 180 CATGGATAAA TAAG 62300 |||||||||| |||| CATGGATAAA TAAG 194 hqPGS_C08HBa0235H18.1+_SGN-E232530- (62107 62300) ******************************************************************************** EST sequence 17 +strand 830 n (File: SGN-E262143+) 1 TTTTTTTCAA GAAGAGTCTT GATTTGCTCA AAACTTTTTC CCTTTTTCTT CACGTATCTT 61 CTACAACTAA AAAGAAAGAA CCCCTTTTTT TCTGATTTTC CATAAAAATT GGTTCTTGAA 121 AGGATAAAGA TTGAATCTTT GTTGTGTTTT ATGAAATGGG TGTTCAGTGT CAAGAAAATA 181 TTTTGGTGAC TGGAGGAGCT GGTTTCATTG GAACACATAC TGTGGTGCAG TTACTGAATG 241 AAGGGTTCAA AGTTACAATC ATTGATAACT TTCATAATTC TGTGAAAGAA GCTGTTGATA 301 GAGTCAGAGA ATTAGTTGGT CCTCAACTTT CACAGAATCT TGAATTCCAT TTGGGTGATA 361 TTAGAAACAG AGATGACTTG GAGAAGCTAT TTTCTAAGAA AGAGTTTGCT GCTGTGGTCC 421 ATTTTGCTGG GCTTAAGGCT GTTGGAGAGA GTGTTGTTCA GCCCTTCCTT TACTTTGAGA 481 ACAATCTGAT TGGATCAATA ACTTTGTATT CAGTCATGGC CAAGTATAAT TGTAAGAAGT 541 TGGTTTTTTC ATCATCTGCA ACAGTTTATG GTCAGCCTGA AAAGGTTCCC TGTGTGGGAG 601 GGATTTGAAT TGAGGCTATG AAATCCTATG GTCGAACAAA GCTATTTCTT NGAGATATTG 661 CACGGAATAT CCAGAAAGCT GATNCAGAAT GGAATATCAT ACTGTTGAGG TATTTCAACC 721 CGGTAGGAGC TCATGAAAGT GGCAAACTCG GGGAAGATCC AAAGGGCATT CCGAACAATC 781 TTATGCCTTA CATTCAGCAA GTAGCTGTTG GTAGATTGCC GGAGTTGAAT Predicted gene structure (within gDNA segment 63670 to 66668): Exon 1 64270 64622 ( 353 n); cDNA 1 353 ( 353 n); score: 1.000 Intron 1 64623 65057 ( 435 n); Pd: 0.981 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 65058 65107 ( 50 n); cDNA 354 403 ( 50 n); score: 1.000 Intron 2 65108 65217 ( 110 n); Pd: 0.963 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 3 65218 65353 ( 136 n); cDNA 404 539 ( 136 n); score: 1.000 Intron 3 65354 65652 ( 299 n); Pd: 0.969 (s: 1.00), Pa: 0.983 (s: 1.00) Exon 4 65653 65754 ( 102 n); cDNA 540 641 ( 102 n); score: 0.917 Intron 4 65755 65869 ( 115 n); Pd: 0.999 (s: 0.83), Pa: 0.993 (s: 0.88) Exon 5 65870 66058 ( 189 n); cDNA 642 830 ( 189 n); score: 0.968 MATCH C08HBa0235H18.1+ SGN-E262143+ 0.983 830 1.000 C PGS_C08HBa0235H18.1+_SGN-E262143+ (64270 64622,65058 65107,65218 65353,65653 65754,65870 66058) Alignment (genomic DNA sequence = upper lines): TTTTTTTCAA GAAGAGTCTT GATTTGCTCA AAACTTTTTC CCTTTTTCTT CACGTATCTT 64329 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTTTTCAA GAAGAGTCTT GATTTGCTCA AAACTTTTTC CCTTTTTCTT CACGTATCTT 60 CTACAACTAA AAAGAAAGAA CCCCTTTTTT TCTGATTTTC CATAAAAATT GGTTCTTGAA 64389 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTACAACTAA AAAGAAAGAA CCCCTTTTTT TCTGATTTTC CATAAAAATT GGTTCTTGAA 120 AGGATAAAGA TTGAATCTTT GTTGTGTTTT ATGAAATGGG TGTTCAGTGT CAAGAAAATA 64449 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGATAAAGA TTGAATCTTT GTTGTGTTTT ATGAAATGGG TGTTCAGTGT CAAGAAAATA 180 TTTTGGTGAC TGGAGGAGCT GGTTTCATTG GAACACATAC TGTGGTGCAG TTACTGAATG 64509 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTGGTGAC TGGAGGAGCT GGTTTCATTG GAACACATAC TGTGGTGCAG TTACTGAATG 240 AAGGGTTCAA AGTTACAATC ATTGATAACT TTCATAATTC TGTGAAAGAA GCTGTTGATA 64569 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGGTTCAA AGTTACAATC ATTGATAACT TTCATAATTC TGTGAAAGAA GCTGTTGATA 300 GAGTCAGAGA ATTAGTTGGT CCTCAACTTT CACAGAATCT TGAATTCCAT TTGGTATGAT 64629 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| GAGTCAGAGA ATTAGTTGGT CCTCAACTTT CACAGAATCT TGAATTCCAT TTG....... 353 TTTTTTTTCA ATCTTTTTTA TTTTTTATCA AACCCGACAT ACACCCTTTT TCTAAAAGCA 64689 .......... .......... .......... .......... .......... .......... 353 CAAATTGTGG GTGGGGGGGG GGGGGGGGAG AAGGAAGGAA ATGTGAAAAA AATGAGCTTT 64749 .......... .......... .......... .......... .......... .......... 353 TGAGATGATC ATGTGTGTGT TTTGTAGTCA TTGAATGTTT AAGGCTCCAT CATTAGCTTT 64809 .......... .......... .......... .......... .......... .......... 353 TTGTGTCATT GTGTGTGTGT TTTTCATTGC TGCCTTGTAT CGTGTTGTTA TCATTTTCTT 64869 .......... .......... .......... .......... .......... .......... 353 AAAAAAGTTA TCTTTATTTT ATTTTATAGG AATCTTGATA GCTCTGTGAT TGTACAACTA 64929 .......... .......... .......... .......... .......... .......... 353 GTTCTTTTTA ATCCTATTTT TTTTTTTTGT GAAATGAATG TTGATCTTAC ATACCTTGTA 64989 .......... .......... .......... .......... .......... .......... 353 TTCACAATGC TAGAATTGTG TTTTTTCACC TTATCTGGGA TTTTACCTTT GTTGCTTCTT 65049 .......... .......... .......... .......... .......... .......... 353 GGTGGCAGGG TGATATTAGA AACAGAGATG ACTTGGAGAA GCTATTTTCT AAGAAAGAGT 65109 || |||||||||| |||||||||| |||||||||| |||||||||| |||||||| ........GG TGATATTAGA AACAGAGATG ACTTGGAGAA GCTATTTTCT AAGAAAGA.. 403 ATGAAAATTT TCTTGTTTTC AAATTATCTC CTGCTGTTAT TATTTCCTTT GAATGCATTT 65169 .......... .......... .......... .......... .......... .......... 403 CTATGGTGTG TTGTGATATT CATTGTTTTG TTATATATAT TGAAATAGGT TTGCTGCTGT 65229 || |||||||||| .......... .......... .......... .......... ........GT TTGCTGCTGT 415 GGTCCATTTT GCTGGGCTTA AGGCTGTTGG AGAGAGTGTT GTTCAGCCCT TCCTTTACTT 65289 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTCCATTTT GCTGGGCTTA AGGCTGTTGG AGAGAGTGTT GTTCAGCCCT TCCTTTACTT 475 TGAGAACAAT CTGATTGGAT CAATAACTTT GTATTCAGTC ATGGCCAAGT ATAATTGTAA 65349 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAGAACAAT CTGATTGGAT CAATAACTTT GTATTCAGTC ATGGCCAAGT ATAATTGTAA 535 GAAGGTACGT CTTTCGATAT AATTTTGGTT TCATATAAGT GAAATATGCT ATGCATTCAG 65409 |||| GAAG...... .......... .......... .......... .......... .......... 539 GGCAAGTTGG AATCTGTTAT GTTCATGATT GCTGCTACCC TTATAGTTTT GGTAGAATTT 65469 .......... .......... .......... .......... .......... .......... 539 GAAGGCTAAT AGTAAACATG GTTCTTCTTT CAAGAACTCA TTTAGCCTCA AGAACATGGG 65529 .......... .......... .......... .......... .......... .......... 539 CGTTGCTAGG GGGCGGAAGG AGGTTCAGTT GTTCATGGTG TGGCGAACTG TTGGATTCGT 65589 .......... .......... .......... .......... .......... .......... 539 AGGAGGGTAT TGAGTAGGTT GGTCAGGTTG ATAACTTTTT AATTTCATTG TGTGAAATTG 65649 .......... .......... .......... .......... .......... .......... 539 CAGTTGGTTT TTTCATCATC TGCAACAGTT TATGGTCAGC CTGAAAAGGT TCCCTGTGT- 65708 ||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| ...TTGGTTT TTTCATCATC TGCAACAGTT TATGGTCAGC CTGAAAAGGT TCCCTGTGTG 596 GGAGGATTTT GAATTGAAGG CTATGAATCC TTATGGTCGA ACAAAGGTTT GTATTGTCAA 65768 ||||| ||| |||||| ||| ||||||| | ||||||||| |||||| GGAGGGATTT GAATTG-AGG CTATGAAATC CTATGGTCGA ACAAAG.... .......... 641 TAATTGTCTC TTAATTTCAT ACTGATTAGA GATAGTTCAT TTGATAGTAT CTCAGTCTGT 65828 .......... .......... .......... .......... .......... .......... 641 AAACTATGTG ACCGAACCTG TGTTTTGTTC TATTTAATTA GCTATTTCTT GAAGATATTG 65888 ||||||||| |||||||| .......... .......... .......... .......... .CTATTTCTT NGAGATATTG 660 CACGGGATAT CCAGAAGGCT GATCAAGAAT GGAATATCAT ACTGTTGAGG TATTTCAACC 65948 ||||| |||| |||||| ||| ||| ||||| |||||||||| |||||||||| |||||||||| CACGGAATAT CCAGAAAGCT GATNCAGAAT GGAATATCAT ACTGTTGAGG TATTTCAACC 720 CGGTAGGAGC TCATGAAAGT GGCAAACTCG GGGAAGATCC AAAGGGCATT CCGAACAATC 66008 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGTAGGAGC TCATGAAAGT GGCAAACTCG GGGAAGATCC AAAGGGCATT CCGAACAATC 780 TTATGCCTTA CATTCAGCAA GTAGCTGTTG GTAGATTGCC GGAGTTGAAT 66058 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTATGCCTTA CATTCAGCAA GTAGCTGTTG GTAGATTGCC GGAGTTGAAT 830 hqPGS_C08HBa0235H18.1+_SGN-E262143+ (64270 64622,65058 65107,65218 65353,65653 65754,65870 66058) ******************************************************************************** EST sequence 276 +strand 506 n (File: SGN-E256568+) 1 TTTTTTTCAA GAAGAGTCTT GATTTGCTCA AAACTTTTTC CCTTTTTCTT CACGTATCTT 61 CTACAACTAA AAAGAAAGAA CCCCTTTTTT TCTGATTTTC CATAAAAATT GGTTCTTGAA 121 AGGATAAAGA TTGAATCTTT GTTGTGTTTT ATGAAATGGG TGTTCAGTGT CAAGAAAATA 181 TTTTGGTGAC TGGAGGAGCT GGTTTCATTG GAACACATAC TGTGGTGCAG TTACTGAATG 241 AAGGGTTCAA AGTTACAATC ATTGATAACT TTCATAATTC TGTGAAAGAA GCTGTTGATA 301 GAGTCAGAGA ATTAGTTGGT CCTCAACTTT CACAGAATCT TGAATTCCAT TTGGGTGATA 361 TTAGAAACAG AGATGACTTG GAGAAGCTAT TTTCTAAGAA AGAGTTTGCT GCTGTGGTCC 421 ATTTTGCTGG GCTTAAGGCT GTTGGAGAGA GTGTTGTTCA GCCCTTCCTT TACTTTGAGA 481 ACAATCTGAT TGGATCAATA ACTTTG Predicted gene structure (within gDNA segment 63670 to 65930): Exon 1 64270 64622 ( 353 n); cDNA 1 353 ( 353 n); score: 1.000 Intron 1 64623 65057 ( 435 n); Pd: 0.981 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 65058 65107 ( 50 n); cDNA 354 403 ( 50 n); score: 1.000 Intron 2 65108 65217 ( 110 n); Pd: 0.963 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 3 65218 65320 ( 103 n); cDNA 404 506 ( 103 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E256568+ 1.000 506 1.000 C PGS_C08HBa0235H18.1+_SGN-E256568+ (64270 64622,65058 65107,65218 65320) Alignment (genomic DNA sequence = upper lines): TTTTTTTCAA GAAGAGTCTT GATTTGCTCA AAACTTTTTC CCTTTTTCTT CACGTATCTT 64329 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTTTTCAA GAAGAGTCTT GATTTGCTCA AAACTTTTTC CCTTTTTCTT CACGTATCTT 60 CTACAACTAA AAAGAAAGAA CCCCTTTTTT TCTGATTTTC CATAAAAATT GGTTCTTGAA 64389 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTACAACTAA AAAGAAAGAA CCCCTTTTTT TCTGATTTTC CATAAAAATT GGTTCTTGAA 120 AGGATAAAGA TTGAATCTTT GTTGTGTTTT ATGAAATGGG TGTTCAGTGT CAAGAAAATA 64449 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGATAAAGA TTGAATCTTT GTTGTGTTTT ATGAAATGGG TGTTCAGTGT CAAGAAAATA 180 TTTTGGTGAC TGGAGGAGCT GGTTTCATTG GAACACATAC TGTGGTGCAG TTACTGAATG 64509 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTGGTGAC TGGAGGAGCT GGTTTCATTG GAACACATAC TGTGGTGCAG TTACTGAATG 240 AAGGGTTCAA AGTTACAATC ATTGATAACT TTCATAATTC TGTGAAAGAA GCTGTTGATA 64569 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGGTTCAA AGTTACAATC ATTGATAACT TTCATAATTC TGTGAAAGAA GCTGTTGATA 300 GAGTCAGAGA ATTAGTTGGT CCTCAACTTT CACAGAATCT TGAATTCCAT TTGGTATGAT 64629 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| GAGTCAGAGA ATTAGTTGGT CCTCAACTTT CACAGAATCT TGAATTCCAT TTG....... 353 TTTTTTTTCA ATCTTTTTTA TTTTTTATCA AACCCGACAT ACACCCTTTT TCTAAAAGCA 64689 .......... .......... .......... .......... .......... .......... 353 CAAATTGTGG GTGGGGGGGG GGGGGGGGAG AAGGAAGGAA ATGTGAAAAA AATGAGCTTT 64749 .......... .......... .......... .......... .......... .......... 353 TGAGATGATC ATGTGTGTGT TTTGTAGTCA TTGAATGTTT AAGGCTCCAT CATTAGCTTT 64809 .......... .......... .......... .......... .......... .......... 353 TTGTGTCATT GTGTGTGTGT TTTTCATTGC TGCCTTGTAT CGTGTTGTTA TCATTTTCTT 64869 .......... .......... .......... .......... .......... .......... 353 AAAAAAGTTA TCTTTATTTT ATTTTATAGG AATCTTGATA GCTCTGTGAT TGTACAACTA 64929 .......... .......... .......... .......... .......... .......... 353 GTTCTTTTTA ATCCTATTTT TTTTTTTTGT GAAATGAATG TTGATCTTAC ATACCTTGTA 64989 .......... .......... .......... .......... .......... .......... 353 TTCACAATGC TAGAATTGTG TTTTTTCACC TTATCTGGGA TTTTACCTTT GTTGCTTCTT 65049 .......... .......... .......... .......... .......... .......... 353 GGTGGCAGGG TGATATTAGA AACAGAGATG ACTTGGAGAA GCTATTTTCT AAGAAAGAGT 65109 || |||||||||| |||||||||| |||||||||| |||||||||| |||||||| ........GG TGATATTAGA AACAGAGATG ACTTGGAGAA GCTATTTTCT AAGAAAGA.. 403 ATGAAAATTT TCTTGTTTTC AAATTATCTC CTGCTGTTAT TATTTCCTTT GAATGCATTT 65169 .......... .......... .......... .......... .......... .......... 403 CTATGGTGTG TTGTGATATT CATTGTTTTG TTATATATAT TGAAATAGGT TTGCTGCTGT 65229 || |||||||||| .......... .......... .......... .......... ........GT TTGCTGCTGT 415 GGTCCATTTT GCTGGGCTTA AGGCTGTTGG AGAGAGTGTT GTTCAGCCCT TCCTTTACTT 65289 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTCCATTTT GCTGGGCTTA AGGCTGTTGG AGAGAGTGTT GTTCAGCCCT TCCTTTACTT 475 TGAGAACAAT CTGATTGGAT CAATAACTTT G 65320 |||||||||| |||||||||| |||||||||| | TGAGAACAAT CTGATTGGAT CAATAACTTT G 506 hqPGS_C08HBa0235H18.1+_SGN-E256568+ (64270 64622,65058 65107,65218 65320) ******************************************************************************** EST sequence 354 +strand 551 n (File: SGN-E245261+) 1 TTGATTTGCT CAAAACTTTT TCCCTTTTTC TTCACGTATC TTCTACAACT AAAAAGAAAG 61 AACCCCTTTT TTTCTGATTT TCCATAAAAA TTGGTTCTTG AAAGGATAAA GATTGAATCT 121 TTGTTGTGTT TTATGAAATG GGTGTTCAGT GTCAAGAAAA TATTTTGGTG ACTGGAGGAG 181 CTGGTTTCAT TGGAACACAT ACTGTGGTGC AGTTACTGAA TGAAGGGTTC AAAGTTACAA 241 TCATTGATAA CTTTCATAAT TCTGTGAAAG AAGCTGTTGA TAGAGTCAGA GAATTAGTTG 301 GTCCTCAACT TTCACAGAAT CTTGAATTCC ATTTGGGTGA TATTAGAAAC AGAGATGACT 361 TGGAGAAGCT ATTTTCTAAG AAAGAGTTTG CTGCTGTGGT CCATTTTGCT GGGCTTAAGG 421 CTGTTGGAGA GAGTGTTGTT CAGCCCTTCC TTTACTTTGA GAACAATCTG ATTGGATCAA 481 TAACTTTGTA TTCAGTCATG GCCAAGTATA ATTGTAAGAA GTTGGTTTTT TCATCATCTG 541 CAACAGTTTA T Predicted gene structure (within gDNA segment 63688 to 66292): Exon 1 64288 64622 ( 335 n); cDNA 1 335 ( 335 n); score: 1.000 Intron 1 64623 65057 ( 435 n); Pd: 0.981 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 65058 65107 ( 50 n); cDNA 336 385 ( 50 n); score: 1.000 Intron 2 65108 65217 ( 110 n); Pd: 0.963 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 3 65218 65353 ( 136 n); cDNA 386 521 ( 136 n); score: 1.000 Intron 3 65354 65652 ( 299 n); Pd: 0.969 (s: 1.00), Pa: 0.983 (s: 0) Exon 4 65653 65682 ( 30 n); cDNA 522 551 ( 30 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E245261+ 1.000 551 1.000 C PGS_C08HBa0235H18.1+_SGN-E245261+ (64288 64622,65058 65107,65218 65353,65653 65682) Alignment (genomic DNA sequence = upper lines): TTGATTTGCT CAAAACTTTT TCCCTTTTTC TTCACGTATC TTCTACAACT AAAAAGAAAG 64347 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATTTGCT CAAAACTTTT TCCCTTTTTC TTCACGTATC TTCTACAACT AAAAAGAAAG 60 AACCCCTTTT TTTCTGATTT TCCATAAAAA TTGGTTCTTG AAAGGATAAA GATTGAATCT 64407 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACCCCTTTT TTTCTGATTT TCCATAAAAA TTGGTTCTTG AAAGGATAAA GATTGAATCT 120 TTGTTGTGTT TTATGAAATG GGTGTTCAGT GTCAAGAAAA TATTTTGGTG ACTGGAGGAG 64467 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTTGTGTT TTATGAAATG GGTGTTCAGT GTCAAGAAAA TATTTTGGTG ACTGGAGGAG 180 CTGGTTTCAT TGGAACACAT ACTGTGGTGC AGTTACTGAA TGAAGGGTTC AAAGTTACAA 64527 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGGTTTCAT TGGAACACAT ACTGTGGTGC AGTTACTGAA TGAAGGGTTC AAAGTTACAA 240 TCATTGATAA CTTTCATAAT TCTGTGAAAG AAGCTGTTGA TAGAGTCAGA GAATTAGTTG 64587 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCATTGATAA CTTTCATAAT TCTGTGAAAG AAGCTGTTGA TAGAGTCAGA GAATTAGTTG 300 GTCCTCAACT TTCACAGAAT CTTGAATTCC ATTTGGTATG ATTTTTTTTT CAATCTTTTT 64647 |||||||||| |||||||||| |||||||||| ||||| GTCCTCAACT TTCACAGAAT CTTGAATTCC ATTTG..... .......... .......... 335 TATTTTTTAT CAAACCCGAC ATACACCCTT TTTCTAAAAG CACAAATTGT GGGTGGGGGG 64707 .......... .......... .......... .......... .......... .......... 335 GGGGGGGGGG AGAAGGAAGG AAATGTGAAA AAAATGAGCT TTTGAGATGA TCATGTGTGT 64767 .......... .......... .......... .......... .......... .......... 335 GTTTTGTAGT CATTGAATGT TTAAGGCTCC ATCATTAGCT TTTTGTGTCA TTGTGTGTGT 64827 .......... .......... .......... .......... .......... .......... 335 GTTTTTCATT GCTGCCTTGT ATCGTGTTGT TATCATTTTC TTAAAAAAGT TATCTTTATT 64887 .......... .......... .......... .......... .......... .......... 335 TTATTTTATA GGAATCTTGA TAGCTCTGTG ATTGTACAAC TAGTTCTTTT TAATCCTATT 64947 .......... .......... .......... .......... .......... .......... 335 TTTTTTTTTT GTGAAATGAA TGTTGATCTT ACATACCTTG TATTCACAAT GCTAGAATTG 65007 .......... .......... .......... .......... .......... .......... 335 TGTTTTTTCA CCTTATCTGG GATTTTACCT TTGTTGCTTC TTGGTGGCAG GGTGATATTA 65067 |||||||||| .......... .......... .......... .......... .......... GGTGATATTA 345 GAAACAGAGA TGACTTGGAG AAGCTATTTT CTAAGAAAGA GTATGAAAAT TTTCTTGTTT 65127 |||||||||| |||||||||| |||||||||| |||||||||| GAAACAGAGA TGACTTGGAG AAGCTATTTT CTAAGAAAGA .......... .......... 385 TCAAATTATC TCCTGCTGTT ATTATTTCCT TTGAATGCAT TTCTATGGTG TGTTGTGATA 65187 .......... .......... .......... .......... .......... .......... 385 TTCATTGTTT TGTTATATAT ATTGAAATAG GTTTGCTGCT GTGGTCCATT TTGCTGGGCT 65247 |||||||||| |||||||||| |||||||||| .......... .......... .......... GTTTGCTGCT GTGGTCCATT TTGCTGGGCT 415 TAAGGCTGTT GGAGAGAGTG TTGTTCAGCC CTTCCTTTAC TTTGAGAACA ATCTGATTGG 65307 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGGCTGTT GGAGAGAGTG TTGTTCAGCC CTTCCTTTAC TTTGAGAACA ATCTGATTGG 475 ATCAATAACT TTGTATTCAG TCATGGCCAA GTATAATTGT AAGAAGGTAC GTCTTTCGAT 65367 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ATCAATAACT TTGTATTCAG TCATGGCCAA GTATAATTGT AAGAAG.... .......... 521 ATAATTTTGG TTTCATATAA GTGAAATATG CTATGCATTC AGGGCAAGTT GGAATCTGTT 65427 .......... .......... .......... .......... .......... .......... 521 ATGTTCATGA TTGCTGCTAC CCTTATAGTT TTGGTAGAAT TTGAAGGCTA ATAGTAAACA 65487 .......... .......... .......... .......... .......... .......... 521 TGGTTCTTCT TTCAAGAACT CATTTAGCCT CAAGAACATG GGCGTTGCTA GGGGGCGGAA 65547 .......... .......... .......... .......... .......... .......... 521 GGAGGTTCAG TTGTTCATGG TGTGGCGAAC TGTTGGATTC GTAGGAGGGT ATTGAGTAGG 65607 .......... .......... .......... .......... .......... .......... 521 TTGGTCAGGT TGATAACTTT TTAATTTCAT TGTGTGAAAT TGCAGTTGGT TTTTTCATCA 65667 ||||| |||||||||| .......... .......... .......... .......... .....TTGGT TTTTTCATCA 536 TCTGCAACAG TTTAT 65682 |||||||||| ||||| TCTGCAACAG TTTAT 551 hqPGS_C08HBa0235H18.1+_SGN-E245261+ (64288 64622,65058 65107,65218 65353,65653 65682) ******************************************************************************** EST sequence 116 +strand 428 n (File: SGN-E295447+) 1 TGATTTGCTC AAAACTTTTT CCCTTTTTCT TCACGTATCT TCTACAACTA AAAAGAAAGA 61 ACCCCTTTTT TTCTGATTTT CCATAAAAAT TGGTTCTTGA AAGGATAAAG ATTGAATCTT 121 TGTTGTGTTT TATGAAATGG GTGTTCAGTG TCAAGAAAAT ATTTTGGTGA CTGGAGGAGC 181 TGGTTTCATT GGAACACATA CTGTGGTGCA GTTACTGAAT GAAGGGTTCA AAGTTACAAT 241 CATTGATAAC TTTCATAATT CTGTGAAAGA AGCTGTTGAT AGAGTCAGAG AATTAGTTGG 301 TCCTCAACTT TCACAGAATC TTGAATTCCA TTTGGGTGAT ATTAGAAACA GAGATGACTT 361 GGAGAAGCTA TTTTCTAAGA AAGAGTTTGC TGCTGTGGTC CATTTTGCTG GGCTTAAAGC 421 TGTTGGAG Predicted gene structure (within gDNA segment 63689 to 65970): Exon 1 64289 64622 ( 334 n); cDNA 1 334 ( 334 n); score: 1.000 Intron 1 64623 65057 ( 435 n); Pd: 0.981 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 65058 65107 ( 50 n); cDNA 335 384 ( 50 n); score: 1.000 Intron 2 65108 65217 ( 110 n); Pd: 0.963 (s: 1.00), Pa: 1.000 (s: 0.98) Exon 3 65218 65261 ( 44 n); cDNA 385 428 ( 44 n); score: 0.977 MATCH C08HBa0235H18.1+ SGN-E295447+ 1.000 428 1.000 C PGS_C08HBa0235H18.1+_SGN-E295447+ (64289 64622,65058 65107,65218 65261) Alignment (genomic DNA sequence = upper lines): TGATTTGCTC AAAACTTTTT CCCTTTTTCT TCACGTATCT TCTACAACTA AAAAGAAAGA 64348 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATTTGCTC AAAACTTTTT CCCTTTTTCT TCACGTATCT TCTACAACTA AAAAGAAAGA 60 ACCCCTTTTT TTCTGATTTT CCATAAAAAT TGGTTCTTGA AAGGATAAAG ATTGAATCTT 64408 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCCCTTTTT TTCTGATTTT CCATAAAAAT TGGTTCTTGA AAGGATAAAG ATTGAATCTT 120 TGTTGTGTTT TATGAAATGG GTGTTCAGTG TCAAGAAAAT ATTTTGGTGA CTGGAGGAGC 64468 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTGTGTTT TATGAAATGG GTGTTCAGTG TCAAGAAAAT ATTTTGGTGA CTGGAGGAGC 180 TGGTTTCATT GGAACACATA CTGTGGTGCA GTTACTGAAT GAAGGGTTCA AAGTTACAAT 64528 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTTTCATT GGAACACATA CTGTGGTGCA GTTACTGAAT GAAGGGTTCA AAGTTACAAT 240 CATTGATAAC TTTCATAATT CTGTGAAAGA AGCTGTTGAT AGAGTCAGAG AATTAGTTGG 64588 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTGATAAC TTTCATAATT CTGTGAAAGA AGCTGTTGAT AGAGTCAGAG AATTAGTTGG 300 TCCTCAACTT TCACAGAATC TTGAATTCCA TTTGGTATGA TTTTTTTTTC AATCTTTTTT 64648 |||||||||| |||||||||| |||||||||| |||| TCCTCAACTT TCACAGAATC TTGAATTCCA TTTG...... .......... .......... 334 ATTTTTTATC AAACCCGACA TACACCCTTT TTCTAAAAGC ACAAATTGTG GGTGGGGGGG 64708 .......... .......... .......... .......... .......... .......... 334 GGGGGGGGGA GAAGGAAGGA AATGTGAAAA AAATGAGCTT TTGAGATGAT CATGTGTGTG 64768 .......... .......... .......... .......... .......... .......... 334 TTTTGTAGTC ATTGAATGTT TAAGGCTCCA TCATTAGCTT TTTGTGTCAT TGTGTGTGTG 64828 .......... .......... .......... .......... .......... .......... 334 TTTTTCATTG CTGCCTTGTA TCGTGTTGTT ATCATTTTCT TAAAAAAGTT ATCTTTATTT 64888 .......... .......... .......... .......... .......... .......... 334 TATTTTATAG GAATCTTGAT AGCTCTGTGA TTGTACAACT AGTTCTTTTT AATCCTATTT 64948 .......... .......... .......... .......... .......... .......... 334 TTTTTTTTTG TGAAATGAAT GTTGATCTTA CATACCTTGT ATTCACAATG CTAGAATTGT 65008 .......... .......... .......... .......... .......... .......... 334 GTTTTTTCAC CTTATCTGGG ATTTTACCTT TGTTGCTTCT TGGTGGCAGG GTGATATTAG 65068 | |||||||||| .......... .......... .......... .......... .........G GTGATATTAG 345 AAACAGAGAT GACTTGGAGA AGCTATTTTC TAAGAAAGAG TATGAAAATT TTCTTGTTTT 65128 |||||||||| |||||||||| |||||||||| ||||||||| AAACAGAGAT GACTTGGAGA AGCTATTTTC TAAGAAAGA. .......... .......... 384 CAAATTATCT CCTGCTGTTA TTATTTCCTT TGAATGCATT TCTATGGTGT GTTGTGATAT 65188 .......... .......... .......... .......... .......... .......... 384 TCATTGTTTT GTTATATATA TTGAAATAGG TTTGCTGCTG TGGTCCATTT TGCTGGGCTT 65248 | |||||||||| |||||||||| |||||||||| .......... .......... .........G TTTGCTGCTG TGGTCCATTT TGCTGGGCTT 415 AAGGCTGTTG GAG 65261 || ||||||| ||| AAAGCTGTTG GAG 428 hqPGS_C08HBa0235H18.1+_SGN-E295447+ (64289 64622,65058 65107,65218 65261) ******************************************************************************** EST sequence 364 +strand 498 n (File: SGN-E247239+) 1 GATTTGCTCA AAACTTTTTC CCTTTTTCTT CACGTATCTT CTACAACTAA AAAGAAAGAA 61 CCCCTTTTTT TCTGATTTTC CATAAAAATT GGTTCTTGAA AGGATAAAGA TTGAATCTTT 121 GTTGTGTTTT ATGAAATGGG TGTTCAGTGT CAAGAAAATA TTTTGGTGAC TGGAGGAGCT 181 GGTTTCATTG GAACACATAC TGTGGTGCAG TTACTGAATG AAGGGTTCAA AGTTACAATC 241 ATTGATAACT TTCATAATTC TGTGAAAGAA GCTGTTGATA GAGTCAGAGA ATTAGTTGGT 301 CCTCAACTTT CACAGAATCT TGAATTCCAT TTGGGTGATA TTAGAAACAG AGATGACTTG 361 GAGAAGCTAT TTTCTAAGAA AGAGTTTGCT GCTGTGGTCC ATTTTGCTGG GCTTAAGGCT 421 GTTGGAGAGA GTGTTGTTCA NCCCTTCCTT TACTTTGAGA ACAATCTGAT TGGATCAATA 481 ACTTTGTATT CAGTCATG Predicted gene structure (within gDNA segment 63690 to 65942): Exon 1 64290 64622 ( 333 n); cDNA 1 333 ( 333 n); score: 1.000 Intron 1 64623 65057 ( 435 n); Pd: 0.981 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 65058 65107 ( 50 n); cDNA 334 383 ( 50 n); score: 1.000 Intron 2 65108 65217 ( 110 n); Pd: 0.963 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 3 65218 65332 ( 115 n); cDNA 384 498 ( 115 n); score: 0.991 MATCH C08HBa0235H18.1+ SGN-E247239+ 0.998 498 1.000 C PGS_C08HBa0235H18.1+_SGN-E247239+ (64290 64622,65058 65107,65218 65332) Alignment (genomic DNA sequence = upper lines): GATTTGCTCA AAACTTTTTC CCTTTTTCTT CACGTATCTT CTACAACTAA AAAGAAAGAA 64349 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATTTGCTCA AAACTTTTTC CCTTTTTCTT CACGTATCTT CTACAACTAA AAAGAAAGAA 60 CCCCTTTTTT TCTGATTTTC CATAAAAATT GGTTCTTGAA AGGATAAAGA TTGAATCTTT 64409 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCCTTTTTT TCTGATTTTC CATAAAAATT GGTTCTTGAA AGGATAAAGA TTGAATCTTT 120 GTTGTGTTTT ATGAAATGGG TGTTCAGTGT CAAGAAAATA TTTTGGTGAC TGGAGGAGCT 64469 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGTGTTTT ATGAAATGGG TGTTCAGTGT CAAGAAAATA TTTTGGTGAC TGGAGGAGCT 180 GGTTTCATTG GAACACATAC TGTGGTGCAG TTACTGAATG AAGGGTTCAA AGTTACAATC 64529 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTTTCATTG GAACACATAC TGTGGTGCAG TTACTGAATG AAGGGTTCAA AGTTACAATC 240 ATTGATAACT TTCATAATTC TGTGAAAGAA GCTGTTGATA GAGTCAGAGA ATTAGTTGGT 64589 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGATAACT TTCATAATTC TGTGAAAGAA GCTGTTGATA GAGTCAGAGA ATTAGTTGGT 300 CCTCAACTTT CACAGAATCT TGAATTCCAT TTGGTATGAT TTTTTTTTCA ATCTTTTTTA 64649 |||||||||| |||||||||| |||||||||| ||| CCTCAACTTT CACAGAATCT TGAATTCCAT TTG....... .......... .......... 333 TTTTTTATCA AACCCGACAT ACACCCTTTT TCTAAAAGCA CAAATTGTGG GTGGGGGGGG 64709 .......... .......... .......... .......... .......... .......... 333 GGGGGGGGAG AAGGAAGGAA ATGTGAAAAA AATGAGCTTT TGAGATGATC ATGTGTGTGT 64769 .......... .......... .......... .......... .......... .......... 333 TTTGTAGTCA TTGAATGTTT AAGGCTCCAT CATTAGCTTT TTGTGTCATT GTGTGTGTGT 64829 .......... .......... .......... .......... .......... .......... 333 TTTTCATTGC TGCCTTGTAT CGTGTTGTTA TCATTTTCTT AAAAAAGTTA TCTTTATTTT 64889 .......... .......... .......... .......... .......... .......... 333 ATTTTATAGG AATCTTGATA GCTCTGTGAT TGTACAACTA GTTCTTTTTA ATCCTATTTT 64949 .......... .......... .......... .......... .......... .......... 333 TTTTTTTTGT GAAATGAATG TTGATCTTAC ATACCTTGTA TTCACAATGC TAGAATTGTG 65009 .......... .......... .......... .......... .......... .......... 333 TTTTTTCACC TTATCTGGGA TTTTACCTTT GTTGCTTCTT GGTGGCAGGG TGATATTAGA 65069 || |||||||||| .......... .......... .......... .......... ........GG TGATATTAGA 345 AACAGAGATG ACTTGGAGAA GCTATTTTCT AAGAAAGAGT ATGAAAATTT TCTTGTTTTC 65129 |||||||||| |||||||||| |||||||||| |||||||| AACAGAGATG ACTTGGAGAA GCTATTTTCT AAGAAAGA.. .......... .......... 383 AAATTATCTC CTGCTGTTAT TATTTCCTTT GAATGCATTT CTATGGTGTG TTGTGATATT 65189 .......... .......... .......... .......... .......... .......... 383 CATTGTTTTG TTATATATAT TGAAATAGGT TTGCTGCTGT GGTCCATTTT GCTGGGCTTA 65249 || |||||||||| |||||||||| |||||||||| .......... .......... ........GT TTGCTGCTGT GGTCCATTTT GCTGGGCTTA 415 AGGCTGTTGG AGAGAGTGTT GTTCAGCCCT TCCTTTACTT TGAGAACAAT CTGATTGGAT 65309 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| AGGCTGTTGG AGAGAGTGTT GTTCANCCCT TCCTTTACTT TGAGAACAAT CTGATTGGAT 475 CAATAACTTT GTATTCAGTC ATG 65332 |||||||||| |||||||||| ||| CAATAACTTT GTATTCAGTC ATG 498 hqPGS_C08HBa0235H18.1+_SGN-E247239+ (64290 64622,65058 65107,65218 65332) ******************************************************************************** EST sequence 102 +strand 590 n (File: SGN-E325442+) 1 TTTGCTCAAA ACTTTTTCCC TTTTTCTTCA CGTATCTTCT ACAACTAAAA AGAAAGAACC 61 CCTTTTTTTC TGATTTTCCA TAAAAATTGG TTCTTGAAAG GATAAAGATT GAATCTTTGT 121 TGTGTTTTAT GAAATGGGTG TTCAGTGTCA AGAAAATATT TTGGTGACTG GAGGAGCTGG 181 TTTCATTGGA ACACATACTG TGGTGCAGTT ACTGAATGAA GGGTTCAAAG TTACAATCAT 241 TGATAACTTT CATAATTCTG TGAAAGAAGC TGTTGATAGA GTCAGAGAAT TAGTTGGTCC 301 TCAACTTTCA CAGAATCTTG AATTCCATTT GGGTGATATT AGAAACAGAG ATGACTTGGA 361 GAAGCTATTT TCTAAGAAAG AGTTTGCTGC TGTGGTCCAT TTTGCTGGGC TTAAGGCTGT 421 TGGAGAGAGT GTTGTTCAGC CCTTCCTTTA CTTTGAGAAC AATCTGATTG GATCAATAAC 481 TTTGTATTCA GTCATGGCCA AGTATAATTG TAAGAAGTTG GTTTTTTCAT CATCTGCAAC 541 AGTTTATGGT CAGCCTGAAA AGGTTCCCTG TGTGGAAGAT TTTGAATTGA Predicted gene structure (within gDNA segment 63692 to 66461): Exon 1 64292 64622 ( 331 n); cDNA 1 331 ( 331 n); score: 1.000 Intron 1 64623 65057 ( 435 n); Pd: 0.981 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 65058 65107 ( 50 n); cDNA 332 381 ( 50 n); score: 1.000 Intron 2 65108 65217 ( 110 n); Pd: 0.963 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 3 65218 65353 ( 136 n); cDNA 382 517 ( 136 n); score: 1.000 Intron 3 65354 65652 ( 299 n); Pd: 0.969 (s: 1.00), Pa: 0.983 (s: 1.00) Exon 4 65653 65725 ( 73 n); cDNA 518 590 ( 73 n); score: 0.986 MATCH C08HBa0235H18.1+ SGN-E325442+ 0.998 590 1.000 C PGS_C08HBa0235H18.1+_SGN-E325442+ (64292 64622,65058 65107,65218 65353,65653 65725) Alignment (genomic DNA sequence = upper lines): TTTGCTCAAA ACTTTTTCCC TTTTTCTTCA CGTATCTTCT ACAACTAAAA AGAAAGAACC 64351 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGCTCAAA ACTTTTTCCC TTTTTCTTCA CGTATCTTCT ACAACTAAAA AGAAAGAACC 60 CCTTTTTTTC TGATTTTCCA TAAAAATTGG TTCTTGAAAG GATAAAGATT GAATCTTTGT 64411 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTTTTTTC TGATTTTCCA TAAAAATTGG TTCTTGAAAG GATAAAGATT GAATCTTTGT 120 TGTGTTTTAT GAAATGGGTG TTCAGTGTCA AGAAAATATT TTGGTGACTG GAGGAGCTGG 64471 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGTTTTAT GAAATGGGTG TTCAGTGTCA AGAAAATATT TTGGTGACTG GAGGAGCTGG 180 TTTCATTGGA ACACATACTG TGGTGCAGTT ACTGAATGAA GGGTTCAAAG TTACAATCAT 64531 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCATTGGA ACACATACTG TGGTGCAGTT ACTGAATGAA GGGTTCAAAG TTACAATCAT 240 TGATAACTTT CATAATTCTG TGAAAGAAGC TGTTGATAGA GTCAGAGAAT TAGTTGGTCC 64591 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATAACTTT CATAATTCTG TGAAAGAAGC TGTTGATAGA GTCAGAGAAT TAGTTGGTCC 300 TCAACTTTCA CAGAATCTTG AATTCCATTT GGTATGATTT TTTTTTCAAT CTTTTTTATT 64651 |||||||||| |||||||||| |||||||||| | TCAACTTTCA CAGAATCTTG AATTCCATTT G......... .......... .......... 331 TTTTATCAAA CCCGACATAC ACCCTTTTTC TAAAAGCACA AATTGTGGGT GGGGGGGGGG 64711 .......... .......... .......... .......... .......... .......... 331 GGGGGGAGAA GGAAGGAAAT GTGAAAAAAA TGAGCTTTTG AGATGATCAT GTGTGTGTTT 64771 .......... .......... .......... .......... .......... .......... 331 TGTAGTCATT GAATGTTTAA GGCTCCATCA TTAGCTTTTT GTGTCATTGT GTGTGTGTTT 64831 .......... .......... .......... .......... .......... .......... 331 TTCATTGCTG CCTTGTATCG TGTTGTTATC ATTTTCTTAA AAAAGTTATC TTTATTTTAT 64891 .......... .......... .......... .......... .......... .......... 331 TTTATAGGAA TCTTGATAGC TCTGTGATTG TACAACTAGT TCTTTTTAAT CCTATTTTTT 64951 .......... .......... .......... .......... .......... .......... 331 TTTTTTGTGA AATGAATGTT GATCTTACAT ACCTTGTATT CACAATGCTA GAATTGTGTT 65011 .......... .......... .......... .......... .......... .......... 331 TTTTCACCTT ATCTGGGATT TTACCTTTGT TGCTTCTTGG TGGCAGGGTG ATATTAGAAA 65071 |||| |||||||||| .......... .......... .......... .......... ......GGTG ATATTAGAAA 345 CAGAGATGAC TTGGAGAAGC TATTTTCTAA GAAAGAGTAT GAAAATTTTC TTGTTTTCAA 65131 |||||||||| |||||||||| |||||||||| |||||| CAGAGATGAC TTGGAGAAGC TATTTTCTAA GAAAGA.... .......... .......... 381 ATTATCTCCT GCTGTTATTA TTTCCTTTGA ATGCATTTCT ATGGTGTGTT GTGATATTCA 65191 .......... .......... .......... .......... .......... .......... 381 TTGTTTTGTT ATATATATTG AAATAGGTTT GCTGCTGTGG TCCATTTTGC TGGGCTTAAG 65251 |||| |||||||||| |||||||||| |||||||||| .......... .......... ......GTTT GCTGCTGTGG TCCATTTTGC TGGGCTTAAG 415 GCTGTTGGAG AGAGTGTTGT TCAGCCCTTC CTTTACTTTG AGAACAATCT GATTGGATCA 65311 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTGTTGGAG AGAGTGTTGT TCAGCCCTTC CTTTACTTTG AGAACAATCT GATTGGATCA 475 ATAACTTTGT ATTCAGTCAT GGCCAAGTAT AATTGTAAGA AGGTACGTCT TTCGATATAA 65371 |||||||||| |||||||||| |||||||||| |||||||||| || ATAACTTTGT ATTCAGTCAT GGCCAAGTAT AATTGTAAGA AG........ .......... 517 TTTTGGTTTC ATATAAGTGA AATATGCTAT GCATTCAGGG CAAGTTGGAA TCTGTTATGT 65431 .......... .......... .......... .......... .......... .......... 517 TCATGATTGC TGCTACCCTT ATAGTTTTGG TAGAATTTGA AGGCTAATAG TAAACATGGT 65491 .......... .......... .......... .......... .......... .......... 517 TCTTCTTTCA AGAACTCATT TAGCCTCAAG AACATGGGCG TTGCTAGGGG GCGGAAGGAG 65551 .......... .......... .......... .......... .......... .......... 517 GTTCAGTTGT TCATGGTGTG GCGAACTGTT GGATTCGTAG GAGGGTATTG AGTAGGTTGG 65611 .......... .......... .......... .......... .......... .......... 517 TCAGGTTGAT AACTTTTTAA TTTCATTGTG TGAAATTGCA GTTGGTTTTT TCATCATCTG 65671 ||||||||| |||||||||| .......... .......... .......... .......... .TTGGTTTTT TCATCATCTG 536 CAACAGTTTA TGGTCAGCCT GAAAAGGTTC CCTGTGTGGA GGATTTTGAA TTGA 65725 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||| CAACAGTTTA TGGTCAGCCT GAAAAGGTTC CCTGTGTGGA AGATTTTGAA TTGA 590 hqPGS_C08HBa0235H18.1+_SGN-E325442+ (64292 64622,65058 65107,65218 65353,65653 65725) ******************************************************************************** EST sequence 1 +strand 589 n (File: SGN-E331696+) 1 TTTGCTCAAA ACTTTTTCCC TTTTTCTTCA CGTATCTTCT ACAACTAAAA AGAAAGAACC 61 CCTTTTTTTC TGATTTTCCA TAAAAATTGG TTCTTGAAAG GATAAAGATT GAATCTTTGT 121 TGTGTTTTAT GAAATGGGTG TTCAGTGTCA AGAAAATATT TTGGTGACTG GAGGAGCTGG 181 TTTCATTGGA ACACATACTG TGGTGCAGTT ACTGAATGAA GGGTTCAAAG TTACAATCAT 241 TGATAACTTT CATAATTCTG TGAAAGAAGC TGTTGATAGA GTCAGAGAAT TAGTTGGTCC 301 TCAACTTTCA CAGAATCTTG AATTCCATTT GGGTGATATT AGAAACAGAG ATGACTTGGA 361 GAAGCTATTT TCTAAGAAAG AGTTTGCTGC TGTGGTCCAT TTTGCTGGGC TTAAGGCTGT 421 TGGAGAGAGT GTTGTTCAGC CCTTCCTTTA CTTTGAGAAC AATCTGATTG GATCAATAAC 481 TTTGTATTCA GTCATGGCCA AGTATAATTG TAAGAAGTTG GTTTTTTCAT CATCTGCAAC 541 AGTTTATGGT CAGCCTGAAA AGGTTCCCTG TGTGGAGGAT TTTGAATTG Predicted gene structure (within gDNA segment 63692 to 66334): Exon 1 64292 64622 ( 331 n); cDNA 1 331 ( 331 n); score: 1.000 Intron 1 64623 65057 ( 435 n); Pd: 0.981 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 65058 65107 ( 50 n); cDNA 332 381 ( 50 n); score: 1.000 Intron 2 65108 65217 ( 110 n); Pd: 0.963 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 3 65218 65353 ( 136 n); cDNA 382 517 ( 136 n); score: 1.000 Intron 3 65354 65652 ( 299 n); Pd: 0.969 (s: 1.00), Pa: 0.983 (s: 1.00) Exon 4 65653 65724 ( 72 n); cDNA 518 589 ( 72 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E331696+ 1.000 589 1.000 C PGS_C08HBa0235H18.1+_SGN-E331696+ (64292 64622,65058 65107,65218 65353,65653 65724) Alignment (genomic DNA sequence = upper lines): TTTGCTCAAA ACTTTTTCCC TTTTTCTTCA CGTATCTTCT ACAACTAAAA AGAAAGAACC 64351 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGCTCAAA ACTTTTTCCC TTTTTCTTCA CGTATCTTCT ACAACTAAAA AGAAAGAACC 60 CCTTTTTTTC TGATTTTCCA TAAAAATTGG TTCTTGAAAG GATAAAGATT GAATCTTTGT 64411 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTTTTTTC TGATTTTCCA TAAAAATTGG TTCTTGAAAG GATAAAGATT GAATCTTTGT 120 TGTGTTTTAT GAAATGGGTG TTCAGTGTCA AGAAAATATT TTGGTGACTG GAGGAGCTGG 64471 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGTTTTAT GAAATGGGTG TTCAGTGTCA AGAAAATATT TTGGTGACTG GAGGAGCTGG 180 TTTCATTGGA ACACATACTG TGGTGCAGTT ACTGAATGAA GGGTTCAAAG TTACAATCAT 64531 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCATTGGA ACACATACTG TGGTGCAGTT ACTGAATGAA GGGTTCAAAG TTACAATCAT 240 TGATAACTTT CATAATTCTG TGAAAGAAGC TGTTGATAGA GTCAGAGAAT TAGTTGGTCC 64591 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATAACTTT CATAATTCTG TGAAAGAAGC TGTTGATAGA GTCAGAGAAT TAGTTGGTCC 300 TCAACTTTCA CAGAATCTTG AATTCCATTT GGTATGATTT TTTTTTCAAT CTTTTTTATT 64651 |||||||||| |||||||||| |||||||||| | TCAACTTTCA CAGAATCTTG AATTCCATTT G......... .......... .......... 331 TTTTATCAAA CCCGACATAC ACCCTTTTTC TAAAAGCACA AATTGTGGGT GGGGGGGGGG 64711 .......... .......... .......... .......... .......... .......... 331 GGGGGGAGAA GGAAGGAAAT GTGAAAAAAA TGAGCTTTTG AGATGATCAT GTGTGTGTTT 64771 .......... .......... .......... .......... .......... .......... 331 TGTAGTCATT GAATGTTTAA GGCTCCATCA TTAGCTTTTT GTGTCATTGT GTGTGTGTTT 64831 .......... .......... .......... .......... .......... .......... 331 TTCATTGCTG CCTTGTATCG TGTTGTTATC ATTTTCTTAA AAAAGTTATC TTTATTTTAT 64891 .......... .......... .......... .......... .......... .......... 331 TTTATAGGAA TCTTGATAGC TCTGTGATTG TACAACTAGT TCTTTTTAAT CCTATTTTTT 64951 .......... .......... .......... .......... .......... .......... 331 TTTTTTGTGA AATGAATGTT GATCTTACAT ACCTTGTATT CACAATGCTA GAATTGTGTT 65011 .......... .......... .......... .......... .......... .......... 331 TTTTCACCTT ATCTGGGATT TTACCTTTGT TGCTTCTTGG TGGCAGGGTG ATATTAGAAA 65071 |||| |||||||||| .......... .......... .......... .......... ......GGTG ATATTAGAAA 345 CAGAGATGAC TTGGAGAAGC TATTTTCTAA GAAAGAGTAT GAAAATTTTC TTGTTTTCAA 65131 |||||||||| |||||||||| |||||||||| |||||| CAGAGATGAC TTGGAGAAGC TATTTTCTAA GAAAGA.... .......... .......... 381 ATTATCTCCT GCTGTTATTA TTTCCTTTGA ATGCATTTCT ATGGTGTGTT GTGATATTCA 65191 .......... .......... .......... .......... .......... .......... 381 TTGTTTTGTT ATATATATTG AAATAGGTTT GCTGCTGTGG TCCATTTTGC TGGGCTTAAG 65251 |||| |||||||||| |||||||||| |||||||||| .......... .......... ......GTTT GCTGCTGTGG TCCATTTTGC TGGGCTTAAG 415 GCTGTTGGAG AGAGTGTTGT TCAGCCCTTC CTTTACTTTG AGAACAATCT GATTGGATCA 65311 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTGTTGGAG AGAGTGTTGT TCAGCCCTTC CTTTACTTTG AGAACAATCT GATTGGATCA 475 ATAACTTTGT ATTCAGTCAT GGCCAAGTAT AATTGTAAGA AGGTACGTCT TTCGATATAA 65371 |||||||||| |||||||||| |||||||||| |||||||||| || ATAACTTTGT ATTCAGTCAT GGCCAAGTAT AATTGTAAGA AG........ .......... 517 TTTTGGTTTC ATATAAGTGA AATATGCTAT GCATTCAGGG CAAGTTGGAA TCTGTTATGT 65431 .......... .......... .......... .......... .......... .......... 517 TCATGATTGC TGCTACCCTT ATAGTTTTGG TAGAATTTGA AGGCTAATAG TAAACATGGT 65491 .......... .......... .......... .......... .......... .......... 517 TCTTCTTTCA AGAACTCATT TAGCCTCAAG AACATGGGCG TTGCTAGGGG GCGGAAGGAG 65551 .......... .......... .......... .......... .......... .......... 517 GTTCAGTTGT TCATGGTGTG GCGAACTGTT GGATTCGTAG GAGGGTATTG AGTAGGTTGG 65611 .......... .......... .......... .......... .......... .......... 517 TCAGGTTGAT AACTTTTTAA TTTCATTGTG TGAAATTGCA GTTGGTTTTT TCATCATCTG 65671 ||||||||| |||||||||| .......... .......... .......... .......... .TTGGTTTTT TCATCATCTG 536 CAACAGTTTA TGGTCAGCCT GAAAAGGTTC CCTGTGTGGA GGATTTTGAA TTG 65724 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| CAACAGTTTA TGGTCAGCCT GAAAAGGTTC CCTGTGTGGA GGATTTTGAA TTG 589 hqPGS_C08HBa0235H18.1+_SGN-E331696+ (64292 64622,65058 65107,65218 65353,65653 65724) ******************************************************************************** EST sequence 5 +strand 588 n (File: SGN-E331702+) 1 TTTGCTCAAA ACTTTTTCCC TTTTTCTTCA CGTATCTTCT ACAACTAAAA AGAAAGAACC 61 CCTTTTTTTC TGATTTTCCA TAAAAATTGG TTCTTGAAAG GATAAAGATT GAATCTTTGT 121 TGTGTTTTAT GAAATGGGTG TTCAGTGTCA AGAAAATATT TTGGTGACTG GAGGAGCTGG 181 TTTCATTGGA ACACATACTG TGGTGCAGTT ACTGAATGAA GGGTTCAAAG TTACAATCAT 241 TGATAACTTT CATAATTCTG TGAAAGAAGC TGTTGATAGA GTCAGAGAAT TAGTTGGTCC 301 TCAACTTTCA CAGAATCTTG AATTCCATTT GGGTGATATT AGAAACAGAG ATGACTTGGA 361 GAAGCTATTT TCTAAGAAAG AGTTTGCTGC TGTGGTCCAT TTTGCTGGGC TTAAAGCTGT 421 TGGAGAGAGT GTTGTTCAGC CCTTCCTTTA CTTTGAGAAC AATCTGATTG GATCAATAAC 481 TTTGTATTCA GTCATGGCCA AGTATAATTG TAAGAAGTTG GTTTTTTCAT CATCTGCAAC 541 AGTTTATGGT CAGCCTGAAA AGGTTCCCTG TGTGGAGGAT TTTGAATT Predicted gene structure (within gDNA segment 63692 to 66333): Exon 1 64292 64622 ( 331 n); cDNA 1 331 ( 331 n); score: 1.000 Intron 1 64623 65057 ( 435 n); Pd: 0.981 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 65058 65107 ( 50 n); cDNA 332 381 ( 50 n); score: 1.000 Intron 2 65108 65217 ( 110 n); Pd: 0.963 (s: 1.00), Pa: 1.000 (s: 0.98) Exon 3 65218 65353 ( 136 n); cDNA 382 517 ( 136 n); score: 0.993 Intron 3 65354 65652 ( 299 n); Pd: 0.969 (s: 1.00), Pa: 0.983 (s: 1.00) Exon 4 65653 65723 ( 71 n); cDNA 518 588 ( 71 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E331702+ 0.998 588 1.000 C PGS_C08HBa0235H18.1+_SGN-E331702+ (64292 64622,65058 65107,65218 65353,65653 65723) Alignment (genomic DNA sequence = upper lines): TTTGCTCAAA ACTTTTTCCC TTTTTCTTCA CGTATCTTCT ACAACTAAAA AGAAAGAACC 64351 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGCTCAAA ACTTTTTCCC TTTTTCTTCA CGTATCTTCT ACAACTAAAA AGAAAGAACC 60 CCTTTTTTTC TGATTTTCCA TAAAAATTGG TTCTTGAAAG GATAAAGATT GAATCTTTGT 64411 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTTTTTTC TGATTTTCCA TAAAAATTGG TTCTTGAAAG GATAAAGATT GAATCTTTGT 120 TGTGTTTTAT GAAATGGGTG TTCAGTGTCA AGAAAATATT TTGGTGACTG GAGGAGCTGG 64471 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGTTTTAT GAAATGGGTG TTCAGTGTCA AGAAAATATT TTGGTGACTG GAGGAGCTGG 180 TTTCATTGGA ACACATACTG TGGTGCAGTT ACTGAATGAA GGGTTCAAAG TTACAATCAT 64531 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCATTGGA ACACATACTG TGGTGCAGTT ACTGAATGAA GGGTTCAAAG TTACAATCAT 240 TGATAACTTT CATAATTCTG TGAAAGAAGC TGTTGATAGA GTCAGAGAAT TAGTTGGTCC 64591 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATAACTTT CATAATTCTG TGAAAGAAGC TGTTGATAGA GTCAGAGAAT TAGTTGGTCC 300 TCAACTTTCA CAGAATCTTG AATTCCATTT GGTATGATTT TTTTTTCAAT CTTTTTTATT 64651 |||||||||| |||||||||| |||||||||| | TCAACTTTCA CAGAATCTTG AATTCCATTT G......... .......... .......... 331 TTTTATCAAA CCCGACATAC ACCCTTTTTC TAAAAGCACA AATTGTGGGT GGGGGGGGGG 64711 .......... .......... .......... .......... .......... .......... 331 GGGGGGAGAA GGAAGGAAAT GTGAAAAAAA TGAGCTTTTG AGATGATCAT GTGTGTGTTT 64771 .......... .......... .......... .......... .......... .......... 331 TGTAGTCATT GAATGTTTAA GGCTCCATCA TTAGCTTTTT GTGTCATTGT GTGTGTGTTT 64831 .......... .......... .......... .......... .......... .......... 331 TTCATTGCTG CCTTGTATCG TGTTGTTATC ATTTTCTTAA AAAAGTTATC TTTATTTTAT 64891 .......... .......... .......... .......... .......... .......... 331 TTTATAGGAA TCTTGATAGC TCTGTGATTG TACAACTAGT TCTTTTTAAT CCTATTTTTT 64951 .......... .......... .......... .......... .......... .......... 331 TTTTTTGTGA AATGAATGTT GATCTTACAT ACCTTGTATT CACAATGCTA GAATTGTGTT 65011 .......... .......... .......... .......... .......... .......... 331 TTTTCACCTT ATCTGGGATT TTACCTTTGT TGCTTCTTGG TGGCAGGGTG ATATTAGAAA 65071 |||| |||||||||| .......... .......... .......... .......... ......GGTG ATATTAGAAA 345 CAGAGATGAC TTGGAGAAGC TATTTTCTAA GAAAGAGTAT GAAAATTTTC TTGTTTTCAA 65131 |||||||||| |||||||||| |||||||||| |||||| CAGAGATGAC TTGGAGAAGC TATTTTCTAA GAAAGA.... .......... .......... 381 ATTATCTCCT GCTGTTATTA TTTCCTTTGA ATGCATTTCT ATGGTGTGTT GTGATATTCA 65191 .......... .......... .......... .......... .......... .......... 381 TTGTTTTGTT ATATATATTG AAATAGGTTT GCTGCTGTGG TCCATTTTGC TGGGCTTAAG 65251 |||| |||||||||| |||||||||| ||||||||| .......... .......... ......GTTT GCTGCTGTGG TCCATTTTGC TGGGCTTAAA 415 GCTGTTGGAG AGAGTGTTGT TCAGCCCTTC CTTTACTTTG AGAACAATCT GATTGGATCA 65311 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTGTTGGAG AGAGTGTTGT TCAGCCCTTC CTTTACTTTG AGAACAATCT GATTGGATCA 475 ATAACTTTGT ATTCAGTCAT GGCCAAGTAT AATTGTAAGA AGGTACGTCT TTCGATATAA 65371 |||||||||| |||||||||| |||||||||| |||||||||| || ATAACTTTGT ATTCAGTCAT GGCCAAGTAT AATTGTAAGA AG........ .......... 517 TTTTGGTTTC ATATAAGTGA AATATGCTAT GCATTCAGGG CAAGTTGGAA TCTGTTATGT 65431 .......... .......... .......... .......... .......... .......... 517 TCATGATTGC TGCTACCCTT ATAGTTTTGG TAGAATTTGA AGGCTAATAG TAAACATGGT 65491 .......... .......... .......... .......... .......... .......... 517 TCTTCTTTCA AGAACTCATT TAGCCTCAAG AACATGGGCG TTGCTAGGGG GCGGAAGGAG 65551 .......... .......... .......... .......... .......... .......... 517 GTTCAGTTGT TCATGGTGTG GCGAACTGTT GGATTCGTAG GAGGGTATTG AGTAGGTTGG 65611 .......... .......... .......... .......... .......... .......... 517 TCAGGTTGAT AACTTTTTAA TTTCATTGTG TGAAATTGCA GTTGGTTTTT TCATCATCTG 65671 ||||||||| |||||||||| .......... .......... .......... .......... .TTGGTTTTT TCATCATCTG 536 CAACAGTTTA TGGTCAGCCT GAAAAGGTTC CCTGTGTGGA GGATTTTGAA TT 65723 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || CAACAGTTTA TGGTCAGCCT GAAAAGGTTC CCTGTGTGGA GGATTTTGAA TT 588 hqPGS_C08HBa0235H18.1+_SGN-E331702+ (64292 64622,65058 65107,65218 65353,65653 65723) ******************************************************************************** EST sequence 198 +strand 547 n (File: SGN-E323607+) 1 TTTGCTCAAA ACTTTTTCCC TTTTTCTTCA CGTATCTTCT ACAACTAAAA AGAAAGAACC 61 CCTTTTTTTC TGATTTTCCA TAAAAATTGG TTCTTGAAAG GATAAAGATT GAATCTTTGT 121 TGTGTTTTAT GAAATGGGTG TTCAGTGTCA AGAAAATATT TTGGTGACTG GAGGAGCTGG 181 TTTCATTGGA ACACATACTG TGGTGCAGTT ACTGAATGAA GGGTTCAAAG TTACAATCAT 241 TGATAACTTT CATAATTCTG TGAAAGAAGC TGTTGATAGA GTCAGAGAAT TAGTTGGTCC 301 TCAACTTTCA CAGAATCTTG AATTCCATTT GGGTGATATT AGAAACAGAG ATGACTTGGA 361 GAAGCTATTT TCTAAGAAAG AGTTTGCTGC TGTGGTCCAT TTTGCTGGGC TTAAGGCTGT 421 TGGAGAGAGT GTTGTTCAGC CCTTCCTTTA CTTTGAGAAC AATCTGATTG GATCAATAAC 481 TTTGTATTCA GTCATGGCCA AGTATAATTG TAAGAAGTTG GTTTTTTCAT CATCTGCAAC 541 AGTTTAT Predicted gene structure (within gDNA segment 63692 to 66292): Exon 1 64292 64622 ( 331 n); cDNA 1 331 ( 331 n); score: 1.000 Intron 1 64623 65057 ( 435 n); Pd: 0.981 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 65058 65107 ( 50 n); cDNA 332 381 ( 50 n); score: 1.000 Intron 2 65108 65217 ( 110 n); Pd: 0.963 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 3 65218 65353 ( 136 n); cDNA 382 517 ( 136 n); score: 1.000 Intron 3 65354 65652 ( 299 n); Pd: 0.969 (s: 1.00), Pa: 0.983 (s: 0) Exon 4 65653 65682 ( 30 n); cDNA 518 547 ( 30 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E323607+ 1.000 547 1.000 C PGS_C08HBa0235H18.1+_SGN-E323607+ (64292 64622,65058 65107,65218 65353,65653 65682) Alignment (genomic DNA sequence = upper lines): TTTGCTCAAA ACTTTTTCCC TTTTTCTTCA CGTATCTTCT ACAACTAAAA AGAAAGAACC 64351 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGCTCAAA ACTTTTTCCC TTTTTCTTCA CGTATCTTCT ACAACTAAAA AGAAAGAACC 60 CCTTTTTTTC TGATTTTCCA TAAAAATTGG TTCTTGAAAG GATAAAGATT GAATCTTTGT 64411 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTTTTTTC TGATTTTCCA TAAAAATTGG TTCTTGAAAG GATAAAGATT GAATCTTTGT 120 TGTGTTTTAT GAAATGGGTG TTCAGTGTCA AGAAAATATT TTGGTGACTG GAGGAGCTGG 64471 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGTTTTAT GAAATGGGTG TTCAGTGTCA AGAAAATATT TTGGTGACTG GAGGAGCTGG 180 TTTCATTGGA ACACATACTG TGGTGCAGTT ACTGAATGAA GGGTTCAAAG TTACAATCAT 64531 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCATTGGA ACACATACTG TGGTGCAGTT ACTGAATGAA GGGTTCAAAG TTACAATCAT 240 TGATAACTTT CATAATTCTG TGAAAGAAGC TGTTGATAGA GTCAGAGAAT TAGTTGGTCC 64591 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATAACTTT CATAATTCTG TGAAAGAAGC TGTTGATAGA GTCAGAGAAT TAGTTGGTCC 300 TCAACTTTCA CAGAATCTTG AATTCCATTT GGTATGATTT TTTTTTCAAT CTTTTTTATT 64651 |||||||||| |||||||||| |||||||||| | TCAACTTTCA CAGAATCTTG AATTCCATTT G......... .......... .......... 331 TTTTATCAAA CCCGACATAC ACCCTTTTTC TAAAAGCACA AATTGTGGGT GGGGGGGGGG 64711 .......... .......... .......... .......... .......... .......... 331 GGGGGGAGAA GGAAGGAAAT GTGAAAAAAA TGAGCTTTTG AGATGATCAT GTGTGTGTTT 64771 .......... .......... .......... .......... .......... .......... 331 TGTAGTCATT GAATGTTTAA GGCTCCATCA TTAGCTTTTT GTGTCATTGT GTGTGTGTTT 64831 .......... .......... .......... .......... .......... .......... 331 TTCATTGCTG CCTTGTATCG TGTTGTTATC ATTTTCTTAA AAAAGTTATC TTTATTTTAT 64891 .......... .......... .......... .......... .......... .......... 331 TTTATAGGAA TCTTGATAGC TCTGTGATTG TACAACTAGT TCTTTTTAAT CCTATTTTTT 64951 .......... .......... .......... .......... .......... .......... 331 TTTTTTGTGA AATGAATGTT GATCTTACAT ACCTTGTATT CACAATGCTA GAATTGTGTT 65011 .......... .......... .......... .......... .......... .......... 331 TTTTCACCTT ATCTGGGATT TTACCTTTGT TGCTTCTTGG TGGCAGGGTG ATATTAGAAA 65071 |||| |||||||||| .......... .......... .......... .......... ......GGTG ATATTAGAAA 345 CAGAGATGAC TTGGAGAAGC TATTTTCTAA GAAAGAGTAT GAAAATTTTC TTGTTTTCAA 65131 |||||||||| |||||||||| |||||||||| |||||| CAGAGATGAC TTGGAGAAGC TATTTTCTAA GAAAGA.... .......... .......... 381 ATTATCTCCT GCTGTTATTA TTTCCTTTGA ATGCATTTCT ATGGTGTGTT GTGATATTCA 65191 .......... .......... .......... .......... .......... .......... 381 TTGTTTTGTT ATATATATTG AAATAGGTTT GCTGCTGTGG TCCATTTTGC TGGGCTTAAG 65251 |||| |||||||||| |||||||||| |||||||||| .......... .......... ......GTTT GCTGCTGTGG TCCATTTTGC TGGGCTTAAG 415 GCTGTTGGAG AGAGTGTTGT TCAGCCCTTC CTTTACTTTG AGAACAATCT GATTGGATCA 65311 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTGTTGGAG AGAGTGTTGT TCAGCCCTTC CTTTACTTTG AGAACAATCT GATTGGATCA 475 ATAACTTTGT ATTCAGTCAT GGCCAAGTAT AATTGTAAGA AGGTACGTCT TTCGATATAA 65371 |||||||||| |||||||||| |||||||||| |||||||||| || ATAACTTTGT ATTCAGTCAT GGCCAAGTAT AATTGTAAGA AG........ .......... 517 TTTTGGTTTC ATATAAGTGA AATATGCTAT GCATTCAGGG CAAGTTGGAA TCTGTTATGT 65431 .......... .......... .......... .......... .......... .......... 517 TCATGATTGC TGCTACCCTT ATAGTTTTGG TAGAATTTGA AGGCTAATAG TAAACATGGT 65491 .......... .......... .......... .......... .......... .......... 517 TCTTCTTTCA AGAACTCATT TAGCCTCAAG AACATGGGCG TTGCTAGGGG GCGGAAGGAG 65551 .......... .......... .......... .......... .......... .......... 517 GTTCAGTTGT TCATGGTGTG GCGAACTGTT GGATTCGTAG GAGGGTATTG AGTAGGTTGG 65611 .......... .......... .......... .......... .......... .......... 517 TCAGGTTGAT AACTTTTTAA TTTCATTGTG TGAAATTGCA GTTGGTTTTT TCATCATCTG 65671 ||||||||| |||||||||| .......... .......... .......... .......... .TTGGTTTTT TCATCATCTG 536 CAACAGTTTA T 65682 |||||||||| | CAACAGTTTA T 547 hqPGS_C08HBa0235H18.1+_SGN-E323607+ (64292 64622,65058 65107,65218 65353,65653 65682) ******************************************************************************** EST sequence 437 +strand 413 n (File: SGN-E200949+) 1 TTTGCTCAAA ACTTTTTCCC TTTTTCTTCA CGTATCTTCT ACAACTAAAA AGAAAGAACC 61 CCTTTTTTTC TGATTTTCCA TAAAAATTGG TTCTTGAAAG GATAAAGATT GAATCTTTGT 121 TGTGTTTTAT GAAATGGGTG TTCAGTGTCA AGAAAATATT TTGGTGACTG GAGGAGCTGG 181 TTTCATTGGA ACACATACTG TGGTGCAGTT ACTGAATGAA GGGTTCAAAG TTACAATCAT 241 TGATAACTTT CATAATTCTG TGAAAGAAGC TGTTGATAGA GTCAGAGAAT TAGTTGGTCC 301 TCAACTTTCA CAGAATCTTG AATTCCATTT GGGTGATATT AGAAACAGAG ATGACTTGGA 361 GAAGCTATTT TCTAAGAAAG AGTTTGCTGC TGTGGTCCAT TTTGCTGGGC TTA Predicted gene structure (within gDNA segment 63692 to 65859): Exon 1 64292 64622 ( 331 n); cDNA 1 331 ( 331 n); score: 1.000 Intron 1 64623 65057 ( 435 n); Pd: 0.981 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 65058 65107 ( 50 n); cDNA 332 381 ( 50 n); score: 1.000 Intron 2 65108 65217 ( 110 n); Pd: 0.963 (s: 1.00), Pa: 1.000 (s: 0) Exon 3 65218 65249 ( 32 n); cDNA 382 413 ( 32 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E200949+ 1.000 413 1.000 C PGS_C08HBa0235H18.1+_SGN-E200949+ (64292 64622,65058 65107,65218 65249) Alignment (genomic DNA sequence = upper lines): TTTGCTCAAA ACTTTTTCCC TTTTTCTTCA CGTATCTTCT ACAACTAAAA AGAAAGAACC 64351 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGCTCAAA ACTTTTTCCC TTTTTCTTCA CGTATCTTCT ACAACTAAAA AGAAAGAACC 60 CCTTTTTTTC TGATTTTCCA TAAAAATTGG TTCTTGAAAG GATAAAGATT GAATCTTTGT 64411 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTTTTTTC TGATTTTCCA TAAAAATTGG TTCTTGAAAG GATAAAGATT GAATCTTTGT 120 TGTGTTTTAT GAAATGGGTG TTCAGTGTCA AGAAAATATT TTGGTGACTG GAGGAGCTGG 64471 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGTTTTAT GAAATGGGTG TTCAGTGTCA AGAAAATATT TTGGTGACTG GAGGAGCTGG 180 TTTCATTGGA ACACATACTG TGGTGCAGTT ACTGAATGAA GGGTTCAAAG TTACAATCAT 64531 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCATTGGA ACACATACTG TGGTGCAGTT ACTGAATGAA GGGTTCAAAG TTACAATCAT 240 TGATAACTTT CATAATTCTG TGAAAGAAGC TGTTGATAGA GTCAGAGAAT TAGTTGGTCC 64591 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATAACTTT CATAATTCTG TGAAAGAAGC TGTTGATAGA GTCAGAGAAT TAGTTGGTCC 300 TCAACTTTCA CAGAATCTTG AATTCCATTT GGTATGATTT TTTTTTCAAT CTTTTTTATT 64651 |||||||||| |||||||||| |||||||||| | TCAACTTTCA CAGAATCTTG AATTCCATTT G......... .......... .......... 331 TTTTATCAAA CCCGACATAC ACCCTTTTTC TAAAAGCACA AATTGTGGGT GGGGGGGGGG 64711 .......... .......... .......... .......... .......... .......... 331 GGGGGGAGAA GGAAGGAAAT GTGAAAAAAA TGAGCTTTTG AGATGATCAT GTGTGTGTTT 64771 .......... .......... .......... .......... .......... .......... 331 TGTAGTCATT GAATGTTTAA GGCTCCATCA TTAGCTTTTT GTGTCATTGT GTGTGTGTTT 64831 .......... .......... .......... .......... .......... .......... 331 TTCATTGCTG CCTTGTATCG TGTTGTTATC ATTTTCTTAA AAAAGTTATC TTTATTTTAT 64891 .......... .......... .......... .......... .......... .......... 331 TTTATAGGAA TCTTGATAGC TCTGTGATTG TACAACTAGT TCTTTTTAAT CCTATTTTTT 64951 .......... .......... .......... .......... .......... .......... 331 TTTTTTGTGA AATGAATGTT GATCTTACAT ACCTTGTATT CACAATGCTA GAATTGTGTT 65011 .......... .......... .......... .......... .......... .......... 331 TTTTCACCTT ATCTGGGATT TTACCTTTGT TGCTTCTTGG TGGCAGGGTG ATATTAGAAA 65071 |||| |||||||||| .......... .......... .......... .......... ......GGTG ATATTAGAAA 345 CAGAGATGAC TTGGAGAAGC TATTTTCTAA GAAAGAGTAT GAAAATTTTC TTGTTTTCAA 65131 |||||||||| |||||||||| |||||||||| |||||| CAGAGATGAC TTGGAGAAGC TATTTTCTAA GAAAGA.... .......... .......... 381 ATTATCTCCT GCTGTTATTA TTTCCTTTGA ATGCATTTCT ATGGTGTGTT GTGATATTCA 65191 .......... .......... .......... .......... .......... .......... 381 TTGTTTTGTT ATATATATTG AAATAGGTTT GCTGCTGTGG TCCATTTTGC TGGGCTTA 65249 |||| |||||||||| |||||||||| |||||||| .......... .......... ......GTTT GCTGCTGTGG TCCATTTTGC TGGGCTTA 413 hqPGS_C08HBa0235H18.1+_SGN-E200949+ (64292 64622,65058 65107,65218 65249) ******************************************************************************** EST sequence 172 +strand 722 n (File: SGN-E328737+) 1 TTGCTCAAAA CTTTTTCCCT TTTTCTTCAC GTATCTTCTA CAACTAAAAA GAAAGAACCC 61 CTTTTTTTCT GATTTTCCAT AAAAATTGGT TCTTGAAAGG ATAAAGATTG AATCTTTGTT 121 GTGTTTTATG AAATGGGTGT TCAGTGTCAA GAAAATATTT TGGTGACTGG AGGAGCTGGT 181 TTCATTGGAA CACATACTGT GGTGCAGTTA CTGAATGAAG GGTTCAAAGT TACAATCATT 241 GATAACTTTC ATAATTCTGT GAAAGAAGCT GTTGATAGAG TCAGAGAATT AGTTGGTCCT 301 CAACTTTCAC AGAATCTTGA ATTCCATTTG GGTGATATTA GAAACAGAGA TGACTTGGAG 361 AAGCTATTTT CTAAGAAAGA GTTTGCTGCT GTGGTCCATT TTGCTGGGCT TAAGGCTGTT 421 GGAGAGAGTG TTGTTCAGCC CTTCCTTTAC TTTGAGAACA ATCTGATTGG ATCAATAACT 481 TTGTATTCAG TCATGGCCAA GTATAATTGT AAGAAGTTGG TTTTTTCATC ATCTGCAACA 541 GTTTATGGTC AGCCTGAAAA GGTTCCCTGT GTGGAGGATT TTGAATTGAA GGCTATGAAT 601 CCTTATGGTC GAACAAAGCT ATTTCTTGAA GATATTGCAC GGGATATCCA GAAGGCTGAT 661 CAAGAATGGA ATATCATACT GTTGAGGTAT TTCAACCCGG TAGGAGCTCA TGAAAGTGGC 721 AA Predicted gene structure (within gDNA segment 63693 to 66583): Exon 1 64293 64622 ( 330 n); cDNA 1 330 ( 330 n); score: 1.000 Intron 1 64623 65057 ( 435 n); Pd: 0.981 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 65058 65107 ( 50 n); cDNA 331 380 ( 50 n); score: 1.000 Intron 2 65108 65217 ( 110 n); Pd: 0.963 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 3 65218 65353 ( 136 n); cDNA 381 516 ( 136 n); score: 1.000 Intron 3 65354 65652 ( 299 n); Pd: 0.969 (s: 1.00), Pa: 0.983 (s: 1.00) Exon 4 65653 65754 ( 102 n); cDNA 517 618 ( 102 n); score: 1.000 Intron 4 65755 65869 ( 115 n); Pd: 0.999 (s: 1.00), Pa: 0.993 (s: 1.00) Exon 5 65870 65973 ( 104 n); cDNA 619 722 ( 104 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E328737+ 1.000 722 1.000 C PGS_C08HBa0235H18.1+_SGN-E328737+ (64293 64622,65058 65107,65218 65353,65653 65754,65870 65973) Alignment (genomic DNA sequence = upper lines): TTGCTCAAAA CTTTTTCCCT TTTTCTTCAC GTATCTTCTA CAACTAAAAA GAAAGAACCC 64352 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCTCAAAA CTTTTTCCCT TTTTCTTCAC GTATCTTCTA CAACTAAAAA GAAAGAACCC 60 CTTTTTTTCT GATTTTCCAT AAAAATTGGT TCTTGAAAGG ATAAAGATTG AATCTTTGTT 64412 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTTTTTCT GATTTTCCAT AAAAATTGGT TCTTGAAAGG ATAAAGATTG AATCTTTGTT 120 GTGTTTTATG AAATGGGTGT TCAGTGTCAA GAAAATATTT TGGTGACTGG AGGAGCTGGT 64472 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGTTTTATG AAATGGGTGT TCAGTGTCAA GAAAATATTT TGGTGACTGG AGGAGCTGGT 180 TTCATTGGAA CACATACTGT GGTGCAGTTA CTGAATGAAG GGTTCAAAGT TACAATCATT 64532 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCATTGGAA CACATACTGT GGTGCAGTTA CTGAATGAAG GGTTCAAAGT TACAATCATT 240 GATAACTTTC ATAATTCTGT GAAAGAAGCT GTTGATAGAG TCAGAGAATT AGTTGGTCCT 64592 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAACTTTC ATAATTCTGT GAAAGAAGCT GTTGATAGAG TCAGAGAATT AGTTGGTCCT 300 CAACTTTCAC AGAATCTTGA ATTCCATTTG GTATGATTTT TTTTTCAATC TTTTTTATTT 64652 |||||||||| |||||||||| |||||||||| CAACTTTCAC AGAATCTTGA ATTCCATTTG .......... .......... .......... 330 TTTATCAAAC CCGACATACA CCCTTTTTCT AAAAGCACAA ATTGTGGGTG GGGGGGGGGG 64712 .......... .......... .......... .......... .......... .......... 330 GGGGGAGAAG GAAGGAAATG TGAAAAAAAT GAGCTTTTGA GATGATCATG TGTGTGTTTT 64772 .......... .......... .......... .......... .......... .......... 330 GTAGTCATTG AATGTTTAAG GCTCCATCAT TAGCTTTTTG TGTCATTGTG TGTGTGTTTT 64832 .......... .......... .......... .......... .......... .......... 330 TCATTGCTGC CTTGTATCGT GTTGTTATCA TTTTCTTAAA AAAGTTATCT TTATTTTATT 64892 .......... .......... .......... .......... .......... .......... 330 TTATAGGAAT CTTGATAGCT CTGTGATTGT ACAACTAGTT CTTTTTAATC CTATTTTTTT 64952 .......... .......... .......... .......... .......... .......... 330 TTTTTGTGAA ATGAATGTTG ATCTTACATA CCTTGTATTC ACAATGCTAG AATTGTGTTT 65012 .......... .......... .......... .......... .......... .......... 330 TTTCACCTTA TCTGGGATTT TACCTTTGTT GCTTCTTGGT GGCAGGGTGA TATTAGAAAC 65072 ||||| |||||||||| .......... .......... .......... .......... .....GGTGA TATTAGAAAC 345 AGAGATGACT TGGAGAAGCT ATTTTCTAAG AAAGAGTATG AAAATTTTCT TGTTTTCAAA 65132 |||||||||| |||||||||| |||||||||| ||||| AGAGATGACT TGGAGAAGCT ATTTTCTAAG AAAGA..... .......... .......... 380 TTATCTCCTG CTGTTATTAT TTCCTTTGAA TGCATTTCTA TGGTGTGTTG TGATATTCAT 65192 .......... .......... .......... .......... .......... .......... 380 TGTTTTGTTA TATATATTGA AATAGGTTTG CTGCTGTGGT CCATTTTGCT GGGCTTAAGG 65252 ||||| |||||||||| |||||||||| |||||||||| .......... .......... .....GTTTG CTGCTGTGGT CCATTTTGCT GGGCTTAAGG 415 CTGTTGGAGA GAGTGTTGTT CAGCCCTTCC TTTACTTTGA GAACAATCTG ATTGGATCAA 65312 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTTGGAGA GAGTGTTGTT CAGCCCTTCC TTTACTTTGA GAACAATCTG ATTGGATCAA 475 TAACTTTGTA TTCAGTCATG GCCAAGTATA ATTGTAAGAA GGTACGTCTT TCGATATAAT 65372 |||||||||| |||||||||| |||||||||| |||||||||| | TAACTTTGTA TTCAGTCATG GCCAAGTATA ATTGTAAGAA G......... .......... 516 TTTGGTTTCA TATAAGTGAA ATATGCTATG CATTCAGGGC AAGTTGGAAT CTGTTATGTT 65432 .......... .......... .......... .......... .......... .......... 516 CATGATTGCT GCTACCCTTA TAGTTTTGGT AGAATTTGAA GGCTAATAGT AAACATGGTT 65492 .......... .......... .......... .......... .......... .......... 516 CTTCTTTCAA GAACTCATTT AGCCTCAAGA ACATGGGCGT TGCTAGGGGG CGGAAGGAGG 65552 .......... .......... .......... .......... .......... .......... 516 TTCAGTTGTT CATGGTGTGG CGAACTGTTG GATTCGTAGG AGGGTATTGA GTAGGTTGGT 65612 .......... .......... .......... .......... .......... .......... 516 CAGGTTGATA ACTTTTTAAT TTCATTGTGT GAAATTGCAG TTGGTTTTTT CATCATCTGC 65672 |||||||||| |||||||||| .......... .......... .......... .......... TTGGTTTTTT CATCATCTGC 536 AACAGTTTAT GGTCAGCCTG AAAAGGTTCC CTGTGTGGAG GATTTTGAAT TGAAGGCTAT 65732 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACAGTTTAT GGTCAGCCTG AAAAGGTTCC CTGTGTGGAG GATTTTGAAT TGAAGGCTAT 596 GAATCCTTAT GGTCGAACAA AGGTTTGTAT TGTCAATAAT TGTCTCTTAA TTTCATACTG 65792 |||||||||| |||||||||| || GAATCCTTAT GGTCGAACAA AG........ .......... .......... .......... 618 ATTAGAGATA GTTCATTTGA TAGTATCTCA GTCTGTAAAC TATGTGACCG AACCTGTGTT 65852 .......... .......... .......... .......... .......... .......... 618 TTGTTCTATT TAATTAGCTA TTTCTTGAAG ATATTGCACG GGATATCCAG AAGGCTGATC 65912 ||| |||||||||| |||||||||| |||||||||| |||||||||| .......... .......CTA TTTCTTGAAG ATATTGCACG GGATATCCAG AAGGCTGATC 661 AAGAATGGAA TATCATACTG TTGAGGTATT TCAACCCGGT AGGAGCTCAT GAAAGTGGCA 65972 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGAATGGAA TATCATACTG TTGAGGTATT TCAACCCGGT AGGAGCTCAT GAAAGTGGCA 721 A 65973 | A 722 hqPGS_C08HBa0235H18.1+_SGN-E328737+ (64293 64622,65058 65107,65218 65353,65653 65754,65870 65973) ******************************************************************************** EST sequence 197 +strand 679 n (File: SGN-E328893+) 1 TTGCTCAAAA CTTTTTCCCT TTTTCTTCAC GTATCTTCTA CAACTAAAAA GAAAGAACCC 61 CTTTTTTTCT GATTTTCCAT AAAAATTGGT TCTTGAAAGG ATAAAGATTG AATCTTTGTT 121 GTGTTTTATG AAATGGGTGT TCAGTGTCAA GAAAATATTT TGGTGACTGG AGGAGCTGGT 181 TTCATTGGAA CACATACTGT GGTGCAGTTA CTGAATGAAG GGTTCAAAGT TACAATCATT 241 GATAACTTTC ATAATTCTGT GAAAGAAGCT GTTGATAGAG TCAGAGAATT AGTTGGTCCT 301 CAACTTTCAC AGAATCTTGA ATTCCATTTG GGTGATATTA GAAACAGAGA TGACTTGGAG 361 AAGCTATTTT CTAAGAAAGA GTTTGCTGCT GTGGTCCATT TTGCTGGGCT TAAGGCTGTT 421 GGAGAGAGTG TTGTTCAGCC CTTCCTTTAC TTTGAGAACA ATCTGATTGG ATCAATAACT 481 TTGTATTCAG TCATGGCCAA GTATAATTGT AAGAAGTTGG TTTTTTCATC ATCTGCAACA 541 GTTTATGGTC AGCCTGAAAA GGTTCCCTGT GTGGAGGATT TTGAATTGAA GGCTATGAAT 601 CCTTATGGTC GAACAAAGCT ATTTCTTGAA GATATTGCAC GGGATATCCA GAAGGCTGAT 661 CAAGAATGGA ATATCATAC Predicted gene structure (within gDNA segment 63693 to 66540): Exon 1 64293 64622 ( 330 n); cDNA 1 330 ( 330 n); score: 1.000 Intron 1 64623 65057 ( 435 n); Pd: 0.981 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 65058 65107 ( 50 n); cDNA 331 380 ( 50 n); score: 1.000 Intron 2 65108 65217 ( 110 n); Pd: 0.963 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 3 65218 65353 ( 136 n); cDNA 381 516 ( 136 n); score: 1.000 Intron 3 65354 65652 ( 299 n); Pd: 0.969 (s: 1.00), Pa: 0.983 (s: 1.00) Exon 4 65653 65754 ( 102 n); cDNA 517 618 ( 102 n); score: 1.000 Intron 4 65755 65869 ( 115 n); Pd: 0.999 (s: 1.00), Pa: 0.993 (s: 1.00) Exon 5 65870 65930 ( 61 n); cDNA 619 679 ( 61 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E328893+ 1.000 679 1.000 C PGS_C08HBa0235H18.1+_SGN-E328893+ (64293 64622,65058 65107,65218 65353,65653 65754,65870 65930) Alignment (genomic DNA sequence = upper lines): TTGCTCAAAA CTTTTTCCCT TTTTCTTCAC GTATCTTCTA CAACTAAAAA GAAAGAACCC 64352 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCTCAAAA CTTTTTCCCT TTTTCTTCAC GTATCTTCTA CAACTAAAAA GAAAGAACCC 60 CTTTTTTTCT GATTTTCCAT AAAAATTGGT TCTTGAAAGG ATAAAGATTG AATCTTTGTT 64412 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTTTTTCT GATTTTCCAT AAAAATTGGT TCTTGAAAGG ATAAAGATTG AATCTTTGTT 120 GTGTTTTATG AAATGGGTGT TCAGTGTCAA GAAAATATTT TGGTGACTGG AGGAGCTGGT 64472 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGTTTTATG AAATGGGTGT TCAGTGTCAA GAAAATATTT TGGTGACTGG AGGAGCTGGT 180 TTCATTGGAA CACATACTGT GGTGCAGTTA CTGAATGAAG GGTTCAAAGT TACAATCATT 64532 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCATTGGAA CACATACTGT GGTGCAGTTA CTGAATGAAG GGTTCAAAGT TACAATCATT 240 GATAACTTTC ATAATTCTGT GAAAGAAGCT GTTGATAGAG TCAGAGAATT AGTTGGTCCT 64592 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAACTTTC ATAATTCTGT GAAAGAAGCT GTTGATAGAG TCAGAGAATT AGTTGGTCCT 300 CAACTTTCAC AGAATCTTGA ATTCCATTTG GTATGATTTT TTTTTCAATC TTTTTTATTT 64652 |||||||||| |||||||||| |||||||||| CAACTTTCAC AGAATCTTGA ATTCCATTTG .......... .......... .......... 330 TTTATCAAAC CCGACATACA CCCTTTTTCT AAAAGCACAA ATTGTGGGTG GGGGGGGGGG 64712 .......... .......... .......... .......... .......... .......... 330 GGGGGAGAAG GAAGGAAATG TGAAAAAAAT GAGCTTTTGA GATGATCATG TGTGTGTTTT 64772 .......... .......... .......... .......... .......... .......... 330 GTAGTCATTG AATGTTTAAG GCTCCATCAT TAGCTTTTTG TGTCATTGTG TGTGTGTTTT 64832 .......... .......... .......... .......... .......... .......... 330 TCATTGCTGC CTTGTATCGT GTTGTTATCA TTTTCTTAAA AAAGTTATCT TTATTTTATT 64892 .......... .......... .......... .......... .......... .......... 330 TTATAGGAAT CTTGATAGCT CTGTGATTGT ACAACTAGTT CTTTTTAATC CTATTTTTTT 64952 .......... .......... .......... .......... .......... .......... 330 TTTTTGTGAA ATGAATGTTG ATCTTACATA CCTTGTATTC ACAATGCTAG AATTGTGTTT 65012 .......... .......... .......... .......... .......... .......... 330 TTTCACCTTA TCTGGGATTT TACCTTTGTT GCTTCTTGGT GGCAGGGTGA TATTAGAAAC 65072 ||||| |||||||||| .......... .......... .......... .......... .....GGTGA TATTAGAAAC 345 AGAGATGACT TGGAGAAGCT ATTTTCTAAG AAAGAGTATG AAAATTTTCT TGTTTTCAAA 65132 |||||||||| |||||||||| |||||||||| ||||| AGAGATGACT TGGAGAAGCT ATTTTCTAAG AAAGA..... .......... .......... 380 TTATCTCCTG CTGTTATTAT TTCCTTTGAA TGCATTTCTA TGGTGTGTTG TGATATTCAT 65192 .......... .......... .......... .......... .......... .......... 380 TGTTTTGTTA TATATATTGA AATAGGTTTG CTGCTGTGGT CCATTTTGCT GGGCTTAAGG 65252 ||||| |||||||||| |||||||||| |||||||||| .......... .......... .....GTTTG CTGCTGTGGT CCATTTTGCT GGGCTTAAGG 415 CTGTTGGAGA GAGTGTTGTT CAGCCCTTCC TTTACTTTGA GAACAATCTG ATTGGATCAA 65312 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTTGGAGA GAGTGTTGTT CAGCCCTTCC TTTACTTTGA GAACAATCTG ATTGGATCAA 475 TAACTTTGTA TTCAGTCATG GCCAAGTATA ATTGTAAGAA GGTACGTCTT TCGATATAAT 65372 |||||||||| |||||||||| |||||||||| |||||||||| | TAACTTTGTA TTCAGTCATG GCCAAGTATA ATTGTAAGAA G......... .......... 516 TTTGGTTTCA TATAAGTGAA ATATGCTATG CATTCAGGGC AAGTTGGAAT CTGTTATGTT 65432 .......... .......... .......... .......... .......... .......... 516 CATGATTGCT GCTACCCTTA TAGTTTTGGT AGAATTTGAA GGCTAATAGT AAACATGGTT 65492 .......... .......... .......... .......... .......... .......... 516 CTTCTTTCAA GAACTCATTT AGCCTCAAGA ACATGGGCGT TGCTAGGGGG CGGAAGGAGG 65552 .......... .......... .......... .......... .......... .......... 516 TTCAGTTGTT CATGGTGTGG CGAACTGTTG GATTCGTAGG AGGGTATTGA GTAGGTTGGT 65612 .......... .......... .......... .......... .......... .......... 516 CAGGTTGATA ACTTTTTAAT TTCATTGTGT GAAATTGCAG TTGGTTTTTT CATCATCTGC 65672 |||||||||| |||||||||| .......... .......... .......... .......... TTGGTTTTTT CATCATCTGC 536 AACAGTTTAT GGTCAGCCTG AAAAGGTTCC CTGTGTGGAG GATTTTGAAT TGAAGGCTAT 65732 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACAGTTTAT GGTCAGCCTG AAAAGGTTCC CTGTGTGGAG GATTTTGAAT TGAAGGCTAT 596 GAATCCTTAT GGTCGAACAA AGGTTTGTAT TGTCAATAAT TGTCTCTTAA TTTCATACTG 65792 |||||||||| |||||||||| || GAATCCTTAT GGTCGAACAA AG........ .......... .......... .......... 618 ATTAGAGATA GTTCATTTGA TAGTATCTCA GTCTGTAAAC TATGTGACCG AACCTGTGTT 65852 .......... .......... .......... .......... .......... .......... 618 TTGTTCTATT TAATTAGCTA TTTCTTGAAG ATATTGCACG GGATATCCAG AAGGCTGATC 65912 ||| |||||||||| |||||||||| |||||||||| |||||||||| .......... .......CTA TTTCTTGAAG ATATTGCACG GGATATCCAG AAGGCTGATC 661 AAGAATGGAA TATCATAC 65930 |||||||||| |||||||| AAGAATGGAA TATCATAC 679 hqPGS_C08HBa0235H18.1+_SGN-E328893+ (64293 64622,65058 65107,65218 65353,65653 65754,65870 65930) ******************************************************************************** EST sequence 192 +strand 555 n (File: SGN-E329036+) 1 TTGCTCAAAA CTTTTTCCCT TTTTCTTCAC GTATCTTCTA CAACTAAAAA GAAAGAACCC 61 CTTTTTTTCT GATTTTCCAT AAAAATTGGT TCTTGAAAGG ATAAAGATTG AATCTTTGTT 121 GTGTTTTATG AAATGGGTGT TCAGTGTCAA GAAAATATTT TGGTGACTGG AGGAGCTGGT 181 TTCATTGGAA CACATACTGT GGTGCAGTTA CTGAATGAAG GGTTCAAAGT TACAATCATT 241 GATAACTTTC ATAATTCTGT GAAAGAAGCT GTTGATAGAG TCAGAGAATT AGTTGGTCCT 301 CAACTTTCAC AGAATCTTGA ATTCCATTTG GGTGATATTA GAAACAGAGA TGACTTGGAG 361 AAGCTATTTT CTAAGAAAGA GTTTGCTGCT GTGGTCCATT TTGCTGGGCT TAAGGCTGTT 421 GGAGAGAGTG TTGTTCAGCC CTTCCTTTAC TTTGAGAACA ATCTGATTGG ATCAATAACT 481 TTGTATTCAG TCATGGCCAA GTATAATTGT AAGAAGTTGG TTTTTTCATC ATCTGCAACA 541 GTTTATGGTC AGCCT Predicted gene structure (within gDNA segment 63693 to 66301): Exon 1 64293 64622 ( 330 n); cDNA 1 330 ( 330 n); score: 1.000 Intron 1 64623 65057 ( 435 n); Pd: 0.981 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 65058 65107 ( 50 n); cDNA 331 380 ( 50 n); score: 1.000 Intron 2 65108 65217 ( 110 n); Pd: 0.963 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 3 65218 65353 ( 136 n); cDNA 381 516 ( 136 n); score: 1.000 Intron 3 65354 65652 ( 299 n); Pd: 0.969 (s: 1.00), Pa: 0.983 (s: 0) Exon 4 65653 65691 ( 39 n); cDNA 517 555 ( 39 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E329036+ 1.000 555 1.000 C PGS_C08HBa0235H18.1+_SGN-E329036+ (64293 64622,65058 65107,65218 65353,65653 65691) Alignment (genomic DNA sequence = upper lines): TTGCTCAAAA CTTTTTCCCT TTTTCTTCAC GTATCTTCTA CAACTAAAAA GAAAGAACCC 64352 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCTCAAAA CTTTTTCCCT TTTTCTTCAC GTATCTTCTA CAACTAAAAA GAAAGAACCC 60 CTTTTTTTCT GATTTTCCAT AAAAATTGGT TCTTGAAAGG ATAAAGATTG AATCTTTGTT 64412 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTTTTTCT GATTTTCCAT AAAAATTGGT TCTTGAAAGG ATAAAGATTG AATCTTTGTT 120 GTGTTTTATG AAATGGGTGT TCAGTGTCAA GAAAATATTT TGGTGACTGG AGGAGCTGGT 64472 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGTTTTATG AAATGGGTGT TCAGTGTCAA GAAAATATTT TGGTGACTGG AGGAGCTGGT 180 TTCATTGGAA CACATACTGT GGTGCAGTTA CTGAATGAAG GGTTCAAAGT TACAATCATT 64532 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCATTGGAA CACATACTGT GGTGCAGTTA CTGAATGAAG GGTTCAAAGT TACAATCATT 240 GATAACTTTC ATAATTCTGT GAAAGAAGCT GTTGATAGAG TCAGAGAATT AGTTGGTCCT 64592 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAACTTTC ATAATTCTGT GAAAGAAGCT GTTGATAGAG TCAGAGAATT AGTTGGTCCT 300 CAACTTTCAC AGAATCTTGA ATTCCATTTG GTATGATTTT TTTTTCAATC TTTTTTATTT 64652 |||||||||| |||||||||| |||||||||| CAACTTTCAC AGAATCTTGA ATTCCATTTG .......... .......... .......... 330 TTTATCAAAC CCGACATACA CCCTTTTTCT AAAAGCACAA ATTGTGGGTG GGGGGGGGGG 64712 .......... .......... .......... .......... .......... .......... 330 GGGGGAGAAG GAAGGAAATG TGAAAAAAAT GAGCTTTTGA GATGATCATG TGTGTGTTTT 64772 .......... .......... .......... .......... .......... .......... 330 GTAGTCATTG AATGTTTAAG GCTCCATCAT TAGCTTTTTG TGTCATTGTG TGTGTGTTTT 64832 .......... .......... .......... .......... .......... .......... 330 TCATTGCTGC CTTGTATCGT GTTGTTATCA TTTTCTTAAA AAAGTTATCT TTATTTTATT 64892 .......... .......... .......... .......... .......... .......... 330 TTATAGGAAT CTTGATAGCT CTGTGATTGT ACAACTAGTT CTTTTTAATC CTATTTTTTT 64952 .......... .......... .......... .......... .......... .......... 330 TTTTTGTGAA ATGAATGTTG ATCTTACATA CCTTGTATTC ACAATGCTAG AATTGTGTTT 65012 .......... .......... .......... .......... .......... .......... 330 TTTCACCTTA TCTGGGATTT TACCTTTGTT GCTTCTTGGT GGCAGGGTGA TATTAGAAAC 65072 ||||| |||||||||| .......... .......... .......... .......... .....GGTGA TATTAGAAAC 345 AGAGATGACT TGGAGAAGCT ATTTTCTAAG AAAGAGTATG AAAATTTTCT TGTTTTCAAA 65132 |||||||||| |||||||||| |||||||||| ||||| AGAGATGACT TGGAGAAGCT ATTTTCTAAG AAAGA..... .......... .......... 380 TTATCTCCTG CTGTTATTAT TTCCTTTGAA TGCATTTCTA TGGTGTGTTG TGATATTCAT 65192 .......... .......... .......... .......... .......... .......... 380 TGTTTTGTTA TATATATTGA AATAGGTTTG CTGCTGTGGT CCATTTTGCT GGGCTTAAGG 65252 ||||| |||||||||| |||||||||| |||||||||| .......... .......... .....GTTTG CTGCTGTGGT CCATTTTGCT GGGCTTAAGG 415 CTGTTGGAGA GAGTGTTGTT CAGCCCTTCC TTTACTTTGA GAACAATCTG ATTGGATCAA 65312 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTTGGAGA GAGTGTTGTT CAGCCCTTCC TTTACTTTGA GAACAATCTG ATTGGATCAA 475 TAACTTTGTA TTCAGTCATG GCCAAGTATA ATTGTAAGAA GGTACGTCTT TCGATATAAT 65372 |||||||||| |||||||||| |||||||||| |||||||||| | TAACTTTGTA TTCAGTCATG GCCAAGTATA ATTGTAAGAA G......... .......... 516 TTTGGTTTCA TATAAGTGAA ATATGCTATG CATTCAGGGC AAGTTGGAAT CTGTTATGTT 65432 .......... .......... .......... .......... .......... .......... 516 CATGATTGCT GCTACCCTTA TAGTTTTGGT AGAATTTGAA GGCTAATAGT AAACATGGTT 65492 .......... .......... .......... .......... .......... .......... 516 CTTCTTTCAA GAACTCATTT AGCCTCAAGA ACATGGGCGT TGCTAGGGGG CGGAAGGAGG 65552 .......... .......... .......... .......... .......... .......... 516 TTCAGTTGTT CATGGTGTGG CGAACTGTTG GATTCGTAGG AGGGTATTGA GTAGGTTGGT 65612 .......... .......... .......... .......... .......... .......... 516 CAGGTTGATA ACTTTTTAAT TTCATTGTGT GAAATTGCAG TTGGTTTTTT CATCATCTGC 65672 |||||||||| |||||||||| .......... .......... .......... .......... TTGGTTTTTT CATCATCTGC 536 AACAGTTTAT GGTCAGCCT 65691 |||||||||| ||||||||| AACAGTTTAT GGTCAGCCT 555 hqPGS_C08HBa0235H18.1+_SGN-E329036+ (64293 64622,65058 65107,65218 65353,65653 65691) ******************************************************************************** EST sequence 178 +strand 369 n (File: SGN-E280972+) 1 TTGCTCAAAA CTTTTTCCCT TTTTCTTCAC GTATCTTCTA CAACTAAAAA GAAAGAACCC 61 CTTTTTTTCT GATTTTCCAT AAAAATTGGT TCTTGAAAGG ATAAAGATTG AATCTTTGTT 121 GTGTTTTATG AAATGGGTGT TCAGTGTCAA GAAAATATTT TGGTGACTGG AGGAGCTGGT 181 TTCATTGGAA CACATACTGT GGTGCAGTTA CTGAATGAAG GGTTCAAAGT TACAATCATT 241 GATAACTTTC ATAATTCTGT GAAAGAAGCT GTTGATAGAG TCAGAGAATT AGTTGGTCCT 301 CAACTTTCAC AGAATCTTGA ATTCCATTTG GGTGATATTA GAAACAGAGA TGACTTGGAG 361 AAGCTATTT Predicted gene structure (within gDNA segment 63693 to 65706): Exon 1 64293 64622 ( 330 n); cDNA 1 330 ( 330 n); score: 1.000 Intron 1 64623 65057 ( 435 n); Pd: 0.981 (s: 1.00), Pa: 1.000 (s: 0) Exon 2 65058 65096 ( 39 n); cDNA 331 369 ( 39 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E280972+ 1.000 369 1.000 C PGS_C08HBa0235H18.1+_SGN-E280972+ (64293 64622,65058 65096) Alignment (genomic DNA sequence = upper lines): TTGCTCAAAA CTTTTTCCCT TTTTCTTCAC GTATCTTCTA CAACTAAAAA GAAAGAACCC 64352 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCTCAAAA CTTTTTCCCT TTTTCTTCAC GTATCTTCTA CAACTAAAAA GAAAGAACCC 60 CTTTTTTTCT GATTTTCCAT AAAAATTGGT TCTTGAAAGG ATAAAGATTG AATCTTTGTT 64412 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTTTTTCT GATTTTCCAT AAAAATTGGT TCTTGAAAGG ATAAAGATTG AATCTTTGTT 120 GTGTTTTATG AAATGGGTGT TCAGTGTCAA GAAAATATTT TGGTGACTGG AGGAGCTGGT 64472 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGTTTTATG AAATGGGTGT TCAGTGTCAA GAAAATATTT TGGTGACTGG AGGAGCTGGT 180 TTCATTGGAA CACATACTGT GGTGCAGTTA CTGAATGAAG GGTTCAAAGT TACAATCATT 64532 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCATTGGAA CACATACTGT GGTGCAGTTA CTGAATGAAG GGTTCAAAGT TACAATCATT 240 GATAACTTTC ATAATTCTGT GAAAGAAGCT GTTGATAGAG TCAGAGAATT AGTTGGTCCT 64592 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAACTTTC ATAATTCTGT GAAAGAAGCT GTTGATAGAG TCAGAGAATT AGTTGGTCCT 300 CAACTTTCAC AGAATCTTGA ATTCCATTTG GTATGATTTT TTTTTCAATC TTTTTTATTT 64652 |||||||||| |||||||||| |||||||||| CAACTTTCAC AGAATCTTGA ATTCCATTTG .......... .......... .......... 330 TTTATCAAAC CCGACATACA CCCTTTTTCT AAAAGCACAA ATTGTGGGTG GGGGGGGGGG 64712 .......... .......... .......... .......... .......... .......... 330 GGGGGAGAAG GAAGGAAATG TGAAAAAAAT GAGCTTTTGA GATGATCATG TGTGTGTTTT 64772 .......... .......... .......... .......... .......... .......... 330 GTAGTCATTG AATGTTTAAG GCTCCATCAT TAGCTTTTTG TGTCATTGTG TGTGTGTTTT 64832 .......... .......... .......... .......... .......... .......... 330 TCATTGCTGC CTTGTATCGT GTTGTTATCA TTTTCTTAAA AAAGTTATCT TTATTTTATT 64892 .......... .......... .......... .......... .......... .......... 330 TTATAGGAAT CTTGATAGCT CTGTGATTGT ACAACTAGTT CTTTTTAATC CTATTTTTTT 64952 .......... .......... .......... .......... .......... .......... 330 TTTTTGTGAA ATGAATGTTG ATCTTACATA CCTTGTATTC ACAATGCTAG AATTGTGTTT 65012 .......... .......... .......... .......... .......... .......... 330 TTTCACCTTA TCTGGGATTT TACCTTTGTT GCTTCTTGGT GGCAGGGTGA TATTAGAAAC 65072 ||||| |||||||||| .......... .......... .......... .......... .....GGTGA TATTAGAAAC 345 AGAGATGACT TGGAGAAGCT ATTT 65096 |||||||||| |||||||||| |||| AGAGATGACT TGGAGAAGCT ATTT 369 hqPGS_C08HBa0235H18.1+_SGN-E280972+ (64293 64622,65058 65096) ******************************************************************************** EST sequence 173 +strand 531 n (File: SGN-E304041+) 1 TCAAAACTTT TTCCCTTTTT CTTCACGTAT CTTCTACAAC TAAAAAGAAA GAACCCCTTT 61 TTTTCTGATT TTCCATAAAA ATTGGTTCTT GAAAGGATAA AGATTGAATC TTTGTTGTGT 121 TTTATGAAAT GGGTGTTCAG TGTCAAGAAA ATATTTTGGT GACTGGAGGA GCTGGTTTCA 181 TTGGAACACA TACTGTGGTG CAGTTACTGA ATGAAGGGTT CAAAGTTACA ATCATTGATA 241 ACTTTCATAA TTCTGTGAAA GAAGCTGTTG ATAGAGTCAG AGAATTAGTT GGTCCTCAAC 301 TTTCACAGAA TCTTGAATTC CATTTGGGTG ATATTAGAAA CAGAGATGAC TTGGAGAAGC 361 TATTTTCTAA GAAAGAGTTT GCTGCTGTGG TCCATTTTGC TGGGCTTAAG GCTGTTGGAG 421 AGAGTGTTGT TCANCCCTTC CTTTACTTTG AGAACAATCT GATTGGATCA ATAACTTTGT 481 ATTCAGTCAT GGCCAAGTAT AATTGTAAGA AGTTGGTTTT TTCATCATCT G Predicted gene structure (within gDNA segment 63697 to 66153): Exon 1 64297 64622 ( 326 n); cDNA 1 326 ( 326 n); score: 1.000 Intron 1 64623 65057 ( 435 n); Pd: 0.981 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 65058 65107 ( 50 n); cDNA 327 376 ( 50 n); score: 1.000 Intron 2 65108 65217 ( 110 n); Pd: 0.963 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 3 65218 65353 ( 136 n); cDNA 377 512 ( 136 n); score: 0.993 Intron 3 65354 65652 ( 299 n); Pd: 0.969 (s: 1.00), Pa: 0.983 (s: 0) Exon 4 65653 65671 ( 19 n); cDNA 513 531 ( 19 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E304041+ 0.998 531 1.000 C PGS_C08HBa0235H18.1+_SGN-E304041+ (64297 64622,65058 65107,65218 65353,65653 65671) Alignment (genomic DNA sequence = upper lines): TCAAAACTTT TTCCCTTTTT CTTCACGTAT CTTCTACAAC TAAAAAGAAA GAACCCCTTT 64356 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAAACTTT TTCCCTTTTT CTTCACGTAT CTTCTACAAC TAAAAAGAAA GAACCCCTTT 60 TTTTCTGATT TTCCATAAAA ATTGGTTCTT GAAAGGATAA AGATTGAATC TTTGTTGTGT 64416 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTCTGATT TTCCATAAAA ATTGGTTCTT GAAAGGATAA AGATTGAATC TTTGTTGTGT 120 TTTATGAAAT GGGTGTTCAG TGTCAAGAAA ATATTTTGGT GACTGGAGGA GCTGGTTTCA 64476 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTATGAAAT GGGTGTTCAG TGTCAAGAAA ATATTTTGGT GACTGGAGGA GCTGGTTTCA 180 TTGGAACACA TACTGTGGTG CAGTTACTGA ATGAAGGGTT CAAAGTTACA ATCATTGATA 64536 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGAACACA TACTGTGGTG CAGTTACTGA ATGAAGGGTT CAAAGTTACA ATCATTGATA 240 ACTTTCATAA TTCTGTGAAA GAAGCTGTTG ATAGAGTCAG AGAATTAGTT GGTCCTCAAC 64596 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTTCATAA TTCTGTGAAA GAAGCTGTTG ATAGAGTCAG AGAATTAGTT GGTCCTCAAC 300 TTTCACAGAA TCTTGAATTC CATTTGGTAT GATTTTTTTT TCAATCTTTT TTATTTTTTA 64656 |||||||||| |||||||||| |||||| TTTCACAGAA TCTTGAATTC CATTTG.... .......... .......... .......... 326 TCAAACCCGA CATACACCCT TTTTCTAAAA GCACAAATTG TGGGTGGGGG GGGGGGGGGG 64716 .......... .......... .......... .......... .......... .......... 326 GAGAAGGAAG GAAATGTGAA AAAAATGAGC TTTTGAGATG ATCATGTGTG TGTTTTGTAG 64776 .......... .......... .......... .......... .......... .......... 326 TCATTGAATG TTTAAGGCTC CATCATTAGC TTTTTGTGTC ATTGTGTGTG TGTTTTTCAT 64836 .......... .......... .......... .......... .......... .......... 326 TGCTGCCTTG TATCGTGTTG TTATCATTTT CTTAAAAAAG TTATCTTTAT TTTATTTTAT 64896 .......... .......... .......... .......... .......... .......... 326 AGGAATCTTG ATAGCTCTGT GATTGTACAA CTAGTTCTTT TTAATCCTAT TTTTTTTTTT 64956 .......... .......... .......... .......... .......... .......... 326 TGTGAAATGA ATGTTGATCT TACATACCTT GTATTCACAA TGCTAGAATT GTGTTTTTTC 65016 .......... .......... .......... .......... .......... .......... 326 ACCTTATCTG GGATTTTACC TTTGTTGCTT CTTGGTGGCA GGGTGATATT AGAAACAGAG 65076 ||||||||| |||||||||| .......... .......... .......... .......... .GGTGATATT AGAAACAGAG 345 ATGACTTGGA GAAGCTATTT TCTAAGAAAG AGTATGAAAA TTTTCTTGTT TTCAAATTAT 65136 |||||||||| |||||||||| |||||||||| | ATGACTTGGA GAAGCTATTT TCTAAGAAAG A......... .......... .......... 376 CTCCTGCTGT TATTATTTCC TTTGAATGCA TTTCTATGGT GTGTTGTGAT ATTCATTGTT 65196 .......... .......... .......... .......... .......... .......... 376 TTGTTATATA TATTGAAATA GGTTTGCTGC TGTGGTCCAT TTTGCTGGGC TTAAGGCTGT 65256 ||||||||| |||||||||| |||||||||| |||||||||| .......... .......... .GTTTGCTGC TGTGGTCCAT TTTGCTGGGC TTAAGGCTGT 415 TGGAGAGAGT GTTGTTCAGC CCTTCCTTTA CTTTGAGAAC AATCTGATTG GATCAATAAC 65316 |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| TGGAGAGAGT GTTGTTCANC CCTTCCTTTA CTTTGAGAAC AATCTGATTG GATCAATAAC 475 TTTGTATTCA GTCATGGCCA AGTATAATTG TAAGAAGGTA CGTCTTTCGA TATAATTTTG 65376 |||||||||| |||||||||| |||||||||| ||||||| TTTGTATTCA GTCATGGCCA AGTATAATTG TAAGAAG... .......... .......... 512 GTTTCATATA AGTGAAATAT GCTATGCATT CAGGGCAAGT TGGAATCTGT TATGTTCATG 65436 .......... .......... .......... .......... .......... .......... 512 ATTGCTGCTA CCCTTATAGT TTTGGTAGAA TTTGAAGGCT AATAGTAAAC ATGGTTCTTC 65496 .......... .......... .......... .......... .......... .......... 512 TTTCAAGAAC TCATTTAGCC TCAAGAACAT GGGCGTTGCT AGGGGGCGGA AGGAGGTTCA 65556 .......... .......... .......... .......... .......... .......... 512 GTTGTTCATG GTGTGGCGAA CTGTTGGATT CGTAGGAGGG TATTGAGTAG GTTGGTCAGG 65616 .......... .......... .......... .......... .......... .......... 512 TTGATAACTT TTTAATTTCA TTGTGTGAAA TTGCAGTTGG TTTTTTCATC ATCTG 65671 |||| |||||||||| ||||| .......... .......... .......... ......TTGG TTTTTTCATC ATCTG 531 hqPGS_C08HBa0235H18.1+_SGN-E304041+ (64297 64622,65058 65107,65218 65353,65653 65671) ******************************************************************************** EST sequence 71 +strand 406 n (File: SGN-E305655+) 1 TCAAAACTTT TTCCCTTTTT CTTCACGTAT CTTCTACAAC TAAAAAGAAA GAACCCCTTT 61 TTTTCTGATT TTCCATAAAA ATTGGTTCTT GAAAGGATAA AGATTGAATC TTTGTTGTGT 121 TTTATGAAAT GGGTGTTCAG TGTCAAGAAA ATATTTTGGT GACTGGAGGA GCTGGTTTCA 181 TTGGAACACA TACTGTGGTG CAGTTACTGA ATGAAGGGTT CAAAGTTACA ATCATTGATA 241 ACTTTCATAA TTCTGTGAAA GAAGCTGTTG ATAGAGTCAG AGAATTAGTT GGTCCTCAAC 301 TTTCACAGAA TCTTGAATTC CATTTGGGTG ATATTAGAAA CAGAGATGAC TTGGAGAAGC 361 TATTTTCTAA GAAAGAGTTT GCTGCTGTGG TCCATTTTGC TGGGCT Predicted gene structure (within gDNA segment 63697 to 65857): Exon 1 64297 64622 ( 326 n); cDNA 1 326 ( 326 n); score: 1.000 Intron 1 64623 65057 ( 435 n); Pd: 0.981 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 65058 65107 ( 50 n); cDNA 327 376 ( 50 n); score: 1.000 Intron 2 65108 65217 ( 110 n); Pd: 0.963 (s: 1.00), Pa: 1.000 (s: 0) Exon 3 65218 65247 ( 30 n); cDNA 377 406 ( 30 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E305655+ 1.000 406 1.000 C PGS_C08HBa0235H18.1+_SGN-E305655+ (64297 64622,65058 65107,65218 65247) Alignment (genomic DNA sequence = upper lines): TCAAAACTTT TTCCCTTTTT CTTCACGTAT CTTCTACAAC TAAAAAGAAA GAACCCCTTT 64356 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAAACTTT TTCCCTTTTT CTTCACGTAT CTTCTACAAC TAAAAAGAAA GAACCCCTTT 60 TTTTCTGATT TTCCATAAAA ATTGGTTCTT GAAAGGATAA AGATTGAATC TTTGTTGTGT 64416 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTCTGATT TTCCATAAAA ATTGGTTCTT GAAAGGATAA AGATTGAATC TTTGTTGTGT 120 TTTATGAAAT GGGTGTTCAG TGTCAAGAAA ATATTTTGGT GACTGGAGGA GCTGGTTTCA 64476 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTATGAAAT GGGTGTTCAG TGTCAAGAAA ATATTTTGGT GACTGGAGGA GCTGGTTTCA 180 TTGGAACACA TACTGTGGTG CAGTTACTGA ATGAAGGGTT CAAAGTTACA ATCATTGATA 64536 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGAACACA TACTGTGGTG CAGTTACTGA ATGAAGGGTT CAAAGTTACA ATCATTGATA 240 ACTTTCATAA TTCTGTGAAA GAAGCTGTTG ATAGAGTCAG AGAATTAGTT GGTCCTCAAC 64596 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTTCATAA TTCTGTGAAA GAAGCTGTTG ATAGAGTCAG AGAATTAGTT GGTCCTCAAC 300 TTTCACAGAA TCTTGAATTC CATTTGGTAT GATTTTTTTT TCAATCTTTT TTATTTTTTA 64656 |||||||||| |||||||||| |||||| TTTCACAGAA TCTTGAATTC CATTTG.... .......... .......... .......... 326 TCAAACCCGA CATACACCCT TTTTCTAAAA GCACAAATTG TGGGTGGGGG GGGGGGGGGG 64716 .......... .......... .......... .......... .......... .......... 326 GAGAAGGAAG GAAATGTGAA AAAAATGAGC TTTTGAGATG ATCATGTGTG TGTTTTGTAG 64776 .......... .......... .......... .......... .......... .......... 326 TCATTGAATG TTTAAGGCTC CATCATTAGC TTTTTGTGTC ATTGTGTGTG TGTTTTTCAT 64836 .......... .......... .......... .......... .......... .......... 326 TGCTGCCTTG TATCGTGTTG TTATCATTTT CTTAAAAAAG TTATCTTTAT TTTATTTTAT 64896 .......... .......... .......... .......... .......... .......... 326 AGGAATCTTG ATAGCTCTGT GATTGTACAA CTAGTTCTTT TTAATCCTAT TTTTTTTTTT 64956 .......... .......... .......... .......... .......... .......... 326 TGTGAAATGA ATGTTGATCT TACATACCTT GTATTCACAA TGCTAGAATT GTGTTTTTTC 65016 .......... .......... .......... .......... .......... .......... 326 ACCTTATCTG GGATTTTACC TTTGTTGCTT CTTGGTGGCA GGGTGATATT AGAAACAGAG 65076 ||||||||| |||||||||| .......... .......... .......... .......... .GGTGATATT AGAAACAGAG 345 ATGACTTGGA GAAGCTATTT TCTAAGAAAG AGTATGAAAA TTTTCTTGTT TTCAAATTAT 65136 |||||||||| |||||||||| |||||||||| | ATGACTTGGA GAAGCTATTT TCTAAGAAAG A......... .......... .......... 376 CTCCTGCTGT TATTATTTCC TTTGAATGCA TTTCTATGGT GTGTTGTGAT ATTCATTGTT 65196 .......... .......... .......... .......... .......... .......... 376 TTGTTATATA TATTGAAATA GGTTTGCTGC TGTGGTCCAT TTTGCTGGGC T 65247 ||||||||| |||||||||| |||||||||| | .......... .......... .GTTTGCTGC TGTGGTCCAT TTTGCTGGGC T 406 hqPGS_C08HBa0235H18.1+_SGN-E305655+ (64297 64622,65058 65107,65218 65247) ******************************************************************************** EST sequence 123 +strand 583 n (File: SGN-E204373+) 1 AAAACTTTTT CCCTTTTTCT TCACGTATCT TCTACAACTA AAAAGAAAGA ACCCCTTTTT 61 TTCTGATTTT CCATAAAAAT TGGTTCTTGA AAGGATAAAG ATTGAATCTT TGTTGTGTTT 121 TATGAAATGG GTGTTCAGTG TCAAGAAAAT ATTTTGGTGA CTGGACGAGC TGGTTTCATT 181 GGAACACATA CTGTGGTGCA GTTACTGAAT GAAGGGTTCA AAGTTACAAT CATTGATAAC 241 TTTCATAATT CTGTGAAAGA AGCTGTTGAT CGAGTCAGAG AATTAGTTGG TCCTCAACTT 301 TCACAGAATC TTGAATTCCA TTTGGGTGAT ATTAGAAACA CAGATGACTT GGATAAGCTA 361 TTTTCTAAGA AAGAGTTTGC TGCTGTGGAC CATTTTGCTG GGCTTAAGGC TGTTGGAGAG 421 AGTGTTGTTC AGCCCTTCCT TTACTTTGAG AACAATCTGA TCGGATCAAT AACTTTGTAT 481 TCAGTCATGG CCAAGTATAA TTGTAAGAAG TTGGTTTTTT CATCATCTGC AACAGCTTAT 541 GGTCAGCCTG AAAAGGTTCC CTGTGCGGAG GATTTTGAAT TGA Predicted gene structure (within gDNA segment 63699 to 66335): Exon 1 64299 64622 ( 324 n); cDNA 1 324 ( 324 n); score: 0.994 Intron 1 64623 65057 ( 435 n); Pd: 0.981 (s: 1.00), Pa: 1.000 (s: 0.96) Exon 2 65058 65107 ( 50 n); cDNA 325 374 ( 50 n); score: 0.960 Intron 2 65108 65217 ( 110 n); Pd: 0.963 (s: 0.96), Pa: 1.000 (s: 0.98) Exon 3 65218 65353 ( 136 n); cDNA 375 510 ( 136 n); score: 0.985 Intron 3 65354 65652 ( 299 n); Pd: 0.969 (s: 0.98), Pa: 0.983 (s: 0.98) Exon 4 65653 65725 ( 73 n); cDNA 511 583 ( 73 n); score: 0.973 MATCH C08HBa0235H18.1+ SGN-E204373+ 0.986 583 1.000 C PGS_C08HBa0235H18.1+_SGN-E204373+ (64299 64622,65058 65107,65218 65353,65653 65725) Alignment (genomic DNA sequence = upper lines): AAAACTTTTT CCCTTTTTCT TCACGTATCT TCTACAACTA AAAAGAAAGA ACCCCTTTTT 64358 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAACTTTTT CCCTTTTTCT TCACGTATCT TCTACAACTA AAAAGAAAGA ACCCCTTTTT 60 TTCTGATTTT CCATAAAAAT TGGTTCTTGA AAGGATAAAG ATTGAATCTT TGTTGTGTTT 64418 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTGATTTT CCATAAAAAT TGGTTCTTGA AAGGATAAAG ATTGAATCTT TGTTGTGTTT 120 TATGAAATGG GTGTTCAGTG TCAAGAAAAT ATTTTGGTGA CTGGAGGAGC TGGTTTCATT 64478 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| TATGAAATGG GTGTTCAGTG TCAAGAAAAT ATTTTGGTGA CTGGACGAGC TGGTTTCATT 180 GGAACACATA CTGTGGTGCA GTTACTGAAT GAAGGGTTCA AAGTTACAAT CATTGATAAC 64538 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAACACATA CTGTGGTGCA GTTACTGAAT GAAGGGTTCA AAGTTACAAT CATTGATAAC 240 TTTCATAATT CTGTGAAAGA AGCTGTTGAT AGAGTCAGAG AATTAGTTGG TCCTCAACTT 64598 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| TTTCATAATT CTGTGAAAGA AGCTGTTGAT CGAGTCAGAG AATTAGTTGG TCCTCAACTT 300 TCACAGAATC TTGAATTCCA TTTGGTATGA TTTTTTTTTC AATCTTTTTT ATTTTTTATC 64658 |||||||||| |||||||||| |||| TCACAGAATC TTGAATTCCA TTTG...... .......... .......... .......... 324 AAACCCGACA TACACCCTTT TTCTAAAAGC ACAAATTGTG GGTGGGGGGG GGGGGGGGGA 64718 .......... .......... .......... .......... .......... .......... 324 GAAGGAAGGA AATGTGAAAA AAATGAGCTT TTGAGATGAT CATGTGTGTG TTTTGTAGTC 64778 .......... .......... .......... .......... .......... .......... 324 ATTGAATGTT TAAGGCTCCA TCATTAGCTT TTTGTGTCAT TGTGTGTGTG TTTTTCATTG 64838 .......... .......... .......... .......... .......... .......... 324 CTGCCTTGTA TCGTGTTGTT ATCATTTTCT TAAAAAAGTT ATCTTTATTT TATTTTATAG 64898 .......... .......... .......... .......... .......... .......... 324 GAATCTTGAT AGCTCTGTGA TTGTACAACT AGTTCTTTTT AATCCTATTT TTTTTTTTTG 64958 .......... .......... .......... .......... .......... .......... 324 TGAAATGAAT GTTGATCTTA CATACCTTGT ATTCACAATG CTAGAATTGT GTTTTTTCAC 65018 .......... .......... .......... .......... .......... .......... 324 CTTATCTGGG ATTTTACCTT TGTTGCTTCT TGGTGGCAGG GTGATATTAG AAACAGAGAT 65078 | |||||||||| ||||| |||| .......... .......... .......... .........G GTGATATTAG AAACACAGAT 345 GACTTGGAGA AGCTATTTTC TAAGAAAGAG TATGAAAATT TTCTTGTTTT CAAATTATCT 65138 |||||||| | |||||||||| ||||||||| GACTTGGATA AGCTATTTTC TAAGAAAGA. .......... .......... .......... 374 CCTGCTGTTA TTATTTCCTT TGAATGCATT TCTATGGTGT GTTGTGATAT TCATTGTTTT 65198 .......... .......... .......... .......... .......... .......... 374 GTTATATATA TTGAAATAGG TTTGCTGCTG TGGTCCATTT TGCTGGGCTT AAGGCTGTTG 65258 | |||||||||| ||| |||||| |||||||||| |||||||||| .......... .........G TTTGCTGCTG TGGACCATTT TGCTGGGCTT AAGGCTGTTG 415 GAGAGAGTGT TGTTCAGCCC TTCCTTTACT TTGAGAACAA TCTGATTGGA TCAATAACTT 65318 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| GAGAGAGTGT TGTTCAGCCC TTCCTTTACT TTGAGAACAA TCTGATCGGA TCAATAACTT 475 TGTATTCAGT CATGGCCAAG TATAATTGTA AGAAGGTACG TCTTTCGATA TAATTTTGGT 65378 |||||||||| |||||||||| |||||||||| ||||| TGTATTCAGT CATGGCCAAG TATAATTGTA AGAAG..... .......... .......... 510 TTCATATAAG TGAAATATGC TATGCATTCA GGGCAAGTTG GAATCTGTTA TGTTCATGAT 65438 .......... .......... .......... .......... .......... .......... 510 TGCTGCTACC CTTATAGTTT TGGTAGAATT TGAAGGCTAA TAGTAAACAT GGTTCTTCTT 65498 .......... .......... .......... .......... .......... .......... 510 TCAAGAACTC ATTTAGCCTC AAGAACATGG GCGTTGCTAG GGGGCGGAAG GAGGTTCAGT 65558 .......... .......... .......... .......... .......... .......... 510 TGTTCATGGT GTGGCGAACT GTTGGATTCG TAGGAGGGTA TTGAGTAGGT TGGTCAGGTT 65618 .......... .......... .......... .......... .......... .......... 510 GATAACTTTT TAATTTCATT GTGTGAAATT GCAGTTGGTT TTTTCATCAT CTGCAACAGT 65678 |||||| |||||||||| ||||||||| .......... .......... .......... ....TTGGTT TTTTCATCAT CTGCAACAGC 536 TTATGGTCAG CCTGAAAAGG TTCCCTGTGT GGAGGATTTT GAATTGA 65725 |||||||||| |||||||||| ||||||||| |||||||||| ||||||| TTATGGTCAG CCTGAAAAGG TTCCCTGTGC GGAGGATTTT GAATTGA 583 hqPGS_C08HBa0235H18.1+_SGN-E204373+ (64299 64622,65058 65107,65218 65353,65653 65725) ******************************************************************************** EST sequence 408 +strand 582 n (File: SGN-E299595+) 1 AAAACTTTTT CCCTTTTTCT TCACGTATCT TCTACAACTA AAAAGAAAGA ACCCCTTTTT 61 TTCTGATTTT CCATAAAAAT TGGTTCTTGA AAGGATAAAG ATTGAATCTT TGTTGTGTTT 121 TATGAAATGG GTGTTCAGTG TCAAGAAAAT ATTTTGGTGA CTGGAGGAGC TGGTTTCATT 181 GGAACACATA CTGTGGTGCA GTTACTGAAT GAAGGGTTCA AAGTTACAAT CATTGATAAC 241 TTTCATAATT CTGTGAAAGA AGCTGTTGAT AGAGTCAGAG AATTAGTTGG TCCTCAACTT 301 TCACAGAATC TTGAATTCCA TTTGGGTGAT ATTAGAAACA GAGATGACTT GTAGAAGCTA 361 TTTTCTAAGA AAGAGTTTGC TGCTGTGGTC CATTTTGCTG GGCTTAAGGC TGTTGGAGAG 421 AGTGTTGTTC AGCCCTTCCT TTACTTTGAG AACAATCTGA TTGGATCAAT AACTTTGTAT 481 TCAGTCATGG CCAAGTATAA TTGTAAGAAG TTGGTTTTTT CATCATCTGC AACAGTTTAT 541 GGTCAGCCTG AAAAGGTTCC CTGTGTGGAG GATTTTGAAT TG Predicted gene structure (within gDNA segment 63699 to 66334): Exon 1 64299 64622 ( 324 n); cDNA 1 324 ( 324 n); score: 1.000 Intron 1 64623 65057 ( 435 n); Pd: 0.981 (s: 1.00), Pa: 1.000 (s: 0.98) Exon 2 65058 65107 ( 50 n); cDNA 325 374 ( 50 n); score: 0.980 Intron 2 65108 65217 ( 110 n); Pd: 0.963 (s: 0.98), Pa: 1.000 (s: 1.00) Exon 3 65218 65353 ( 136 n); cDNA 375 510 ( 136 n); score: 1.000 Intron 3 65354 65652 ( 299 n); Pd: 0.969 (s: 1.00), Pa: 0.983 (s: 1.00) Exon 4 65653 65724 ( 72 n); cDNA 511 582 ( 72 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E299595+ 0.998 582 1.000 C PGS_C08HBa0235H18.1+_SGN-E299595+ (64299 64622,65058 65107,65218 65353,65653 65724) Alignment (genomic DNA sequence = upper lines): AAAACTTTTT CCCTTTTTCT TCACGTATCT TCTACAACTA AAAAGAAAGA ACCCCTTTTT 64358 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAACTTTTT CCCTTTTTCT TCACGTATCT TCTACAACTA AAAAGAAAGA ACCCCTTTTT 60 TTCTGATTTT CCATAAAAAT TGGTTCTTGA AAGGATAAAG ATTGAATCTT TGTTGTGTTT 64418 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTGATTTT CCATAAAAAT TGGTTCTTGA AAGGATAAAG ATTGAATCTT TGTTGTGTTT 120 TATGAAATGG GTGTTCAGTG TCAAGAAAAT ATTTTGGTGA CTGGAGGAGC TGGTTTCATT 64478 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATGAAATGG GTGTTCAGTG TCAAGAAAAT ATTTTGGTGA CTGGAGGAGC TGGTTTCATT 180 GGAACACATA CTGTGGTGCA GTTACTGAAT GAAGGGTTCA AAGTTACAAT CATTGATAAC 64538 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAACACATA CTGTGGTGCA GTTACTGAAT GAAGGGTTCA AAGTTACAAT CATTGATAAC 240 TTTCATAATT CTGTGAAAGA AGCTGTTGAT AGAGTCAGAG AATTAGTTGG TCCTCAACTT 64598 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCATAATT CTGTGAAAGA AGCTGTTGAT AGAGTCAGAG AATTAGTTGG TCCTCAACTT 300 TCACAGAATC TTGAATTCCA TTTGGTATGA TTTTTTTTTC AATCTTTTTT ATTTTTTATC 64658 |||||||||| |||||||||| |||| TCACAGAATC TTGAATTCCA TTTG...... .......... .......... .......... 324 AAACCCGACA TACACCCTTT TTCTAAAAGC ACAAATTGTG GGTGGGGGGG GGGGGGGGGA 64718 .......... .......... .......... .......... .......... .......... 324 GAAGGAAGGA AATGTGAAAA AAATGAGCTT TTGAGATGAT CATGTGTGTG TTTTGTAGTC 64778 .......... .......... .......... .......... .......... .......... 324 ATTGAATGTT TAAGGCTCCA TCATTAGCTT TTTGTGTCAT TGTGTGTGTG TTTTTCATTG 64838 .......... .......... .......... .......... .......... .......... 324 CTGCCTTGTA TCGTGTTGTT ATCATTTTCT TAAAAAAGTT ATCTTTATTT TATTTTATAG 64898 .......... .......... .......... .......... .......... .......... 324 GAATCTTGAT AGCTCTGTGA TTGTACAACT AGTTCTTTTT AATCCTATTT TTTTTTTTTG 64958 .......... .......... .......... .......... .......... .......... 324 TGAAATGAAT GTTGATCTTA CATACCTTGT ATTCACAATG CTAGAATTGT GTTTTTTCAC 65018 .......... .......... .......... .......... .......... .......... 324 CTTATCTGGG ATTTTACCTT TGTTGCTTCT TGGTGGCAGG GTGATATTAG AAACAGAGAT 65078 | |||||||||| |||||||||| .......... .......... .......... .........G GTGATATTAG AAACAGAGAT 345 GACTTGGAGA AGCTATTTTC TAAGAAAGAG TATGAAAATT TTCTTGTTTT CAAATTATCT 65138 |||||| ||| |||||||||| ||||||||| GACTTGTAGA AGCTATTTTC TAAGAAAGA. .......... .......... .......... 374 CCTGCTGTTA TTATTTCCTT TGAATGCATT TCTATGGTGT GTTGTGATAT TCATTGTTTT 65198 .......... .......... .......... .......... .......... .......... 374 GTTATATATA TTGAAATAGG TTTGCTGCTG TGGTCCATTT TGCTGGGCTT AAGGCTGTTG 65258 | |||||||||| |||||||||| |||||||||| |||||||||| .......... .........G TTTGCTGCTG TGGTCCATTT TGCTGGGCTT AAGGCTGTTG 415 GAGAGAGTGT TGTTCAGCCC TTCCTTTACT TTGAGAACAA TCTGATTGGA TCAATAACTT 65318 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGAGAGTGT TGTTCAGCCC TTCCTTTACT TTGAGAACAA TCTGATTGGA TCAATAACTT 475 TGTATTCAGT CATGGCCAAG TATAATTGTA AGAAGGTACG TCTTTCGATA TAATTTTGGT 65378 |||||||||| |||||||||| |||||||||| ||||| TGTATTCAGT CATGGCCAAG TATAATTGTA AGAAG..... .......... .......... 510 TTCATATAAG TGAAATATGC TATGCATTCA GGGCAAGTTG GAATCTGTTA TGTTCATGAT 65438 .......... .......... .......... .......... .......... .......... 510 TGCTGCTACC CTTATAGTTT TGGTAGAATT TGAAGGCTAA TAGTAAACAT GGTTCTTCTT 65498 .......... .......... .......... .......... .......... .......... 510 TCAAGAACTC ATTTAGCCTC AAGAACATGG GCGTTGCTAG GGGGCGGAAG GAGGTTCAGT 65558 .......... .......... .......... .......... .......... .......... 510 TGTTCATGGT GTGGCGAACT GTTGGATTCG TAGGAGGGTA TTGAGTAGGT TGGTCAGGTT 65618 .......... .......... .......... .......... .......... .......... 510 GATAACTTTT TAATTTCATT GTGTGAAATT GCAGTTGGTT TTTTCATCAT CTGCAACAGT 65678 |||||| |||||||||| |||||||||| .......... .......... .......... ....TTGGTT TTTTCATCAT CTGCAACAGT 536 TTATGGTCAG CCTGAAAAGG TTCCCTGTGT GGAGGATTTT GAATTG 65724 |||||||||| |||||||||| |||||||||| |||||||||| |||||| TTATGGTCAG CCTGAAAAGG TTCCCTGTGT GGAGGATTTT GAATTG 582 hqPGS_C08HBa0235H18.1+_SGN-E299595+ (64299 64622,65058 65107,65218 65353,65653 65724) ******************************************************************************** EST sequence 270 +strand 578 n (File: SGN-E256622+) 1 CTTTTTCCCT TTTTCTTCAC GTATCTTCTA CAACTAAAAA GAAAGAACCC CTTTTTTTCT 61 GATTTTCCAT AAAAATTGGT TCTTGAAAGG ATAAAGATTG AATCTTTGTT GTGTTTTATG 121 AAATGGGTGT TCAGTGTCAA GAAAATATTT TGGTGACTGG AGGAGCTGGT TTCATTGGAA 181 CACATACTGT GGTGCAGTTA CTGAATGAAG GGTTCAAAGT TACAATCATT GATAACTTTC 241 ATAATTCTGT GAAAGAAGCT GTTGATAGAG TCAGAGAATT AGTTGGTCCT CAACTTTCAC 301 AGAATCTTGA ATTCCATTTG GGTGATATTA GAAACAGAGA TGACTTGGAG AAGCTATTTT 361 CTAAGAAAGA GTTTGCTGCT GTGGTCCATT TTGCTGGGCT TAAGGCTGTT GGAGAGAGTG 421 TTGTTCAGCC CTTCCTTTAC TTTGAGAACA ATCTGATTGG ATCAATAACT TTGTATTCAG 481 TCATGGCCAA GTATAATTGT AAGAAGTTGG TTTTTTCATC ATCTGCAACA GTTTATGGTC 541 AGCCTGAAAA GGTTCCCTGT GTGGAGGATT TTGAATTG Predicted gene structure (within gDNA segment 63676 to 66334): Exon 1 64303 64622 ( 320 n); cDNA 1 320 ( 320 n); score: 1.000 Intron 1 64623 65057 ( 435 n); Pd: 0.981 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 65058 65107 ( 50 n); cDNA 321 370 ( 50 n); score: 1.000 Intron 2 65108 65217 ( 110 n); Pd: 0.963 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 3 65218 65353 ( 136 n); cDNA 371 506 ( 136 n); score: 1.000 Intron 3 65354 65652 ( 299 n); Pd: 0.969 (s: 1.00), Pa: 0.983 (s: 1.00) Exon 4 65653 65724 ( 72 n); cDNA 507 578 ( 72 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E256622+ 1.000 578 1.000 C PGS_C08HBa0235H18.1+_SGN-E256622+ (64303 64622,65058 65107,65218 65353,65653 65724) Alignment (genomic DNA sequence = upper lines): CTTTTTCCCT TTTTCTTCAC GTATCTTCTA CAACTAAAAA GAAAGAACCC CTTTTTTTCT 64362 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTTTCCCT TTTTCTTCAC GTATCTTCTA CAACTAAAAA GAAAGAACCC CTTTTTTTCT 60 GATTTTCCAT AAAAATTGGT TCTTGAAAGG ATAAAGATTG AATCTTTGTT GTGTTTTATG 64422 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATTTTCCAT AAAAATTGGT TCTTGAAAGG ATAAAGATTG AATCTTTGTT GTGTTTTATG 120 AAATGGGTGT TCAGTGTCAA GAAAATATTT TGGTGACTGG AGGAGCTGGT TTCATTGGAA 64482 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATGGGTGT TCAGTGTCAA GAAAATATTT TGGTGACTGG AGGAGCTGGT TTCATTGGAA 180 CACATACTGT GGTGCAGTTA CTGAATGAAG GGTTCAAAGT TACAATCATT GATAACTTTC 64542 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACATACTGT GGTGCAGTTA CTGAATGAAG GGTTCAAAGT TACAATCATT GATAACTTTC 240 ATAATTCTGT GAAAGAAGCT GTTGATAGAG TCAGAGAATT AGTTGGTCCT CAACTTTCAC 64602 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAATTCTGT GAAAGAAGCT GTTGATAGAG TCAGAGAATT AGTTGGTCCT CAACTTTCAC 300 AGAATCTTGA ATTCCATTTG GTATGATTTT TTTTTCAATC TTTTTTATTT TTTATCAAAC 64662 |||||||||| |||||||||| AGAATCTTGA ATTCCATTTG .......... .......... .......... .......... 320 CCGACATACA CCCTTTTTCT AAAAGCACAA ATTGTGGGTG GGGGGGGGGG GGGGGAGAAG 64722 .......... .......... .......... .......... .......... .......... 320 GAAGGAAATG TGAAAAAAAT GAGCTTTTGA GATGATCATG TGTGTGTTTT GTAGTCATTG 64782 .......... .......... .......... .......... .......... .......... 320 AATGTTTAAG GCTCCATCAT TAGCTTTTTG TGTCATTGTG TGTGTGTTTT TCATTGCTGC 64842 .......... .......... .......... .......... .......... .......... 320 CTTGTATCGT GTTGTTATCA TTTTCTTAAA AAAGTTATCT TTATTTTATT TTATAGGAAT 64902 .......... .......... .......... .......... .......... .......... 320 CTTGATAGCT CTGTGATTGT ACAACTAGTT CTTTTTAATC CTATTTTTTT TTTTTGTGAA 64962 .......... .......... .......... .......... .......... .......... 320 ATGAATGTTG ATCTTACATA CCTTGTATTC ACAATGCTAG AATTGTGTTT TTTCACCTTA 65022 .......... .......... .......... .......... .......... .......... 320 TCTGGGATTT TACCTTTGTT GCTTCTTGGT GGCAGGGTGA TATTAGAAAC AGAGATGACT 65082 ||||| |||||||||| |||||||||| .......... .......... .......... .....GGTGA TATTAGAAAC AGAGATGACT 345 TGGAGAAGCT ATTTTCTAAG AAAGAGTATG AAAATTTTCT TGTTTTCAAA TTATCTCCTG 65142 |||||||||| |||||||||| ||||| TGGAGAAGCT ATTTTCTAAG AAAGA..... .......... .......... .......... 370 CTGTTATTAT TTCCTTTGAA TGCATTTCTA TGGTGTGTTG TGATATTCAT TGTTTTGTTA 65202 .......... .......... .......... .......... .......... .......... 370 TATATATTGA AATAGGTTTG CTGCTGTGGT CCATTTTGCT GGGCTTAAGG CTGTTGGAGA 65262 ||||| |||||||||| |||||||||| |||||||||| |||||||||| .......... .....GTTTG CTGCTGTGGT CCATTTTGCT GGGCTTAAGG CTGTTGGAGA 415 GAGTGTTGTT CAGCCCTTCC TTTACTTTGA GAACAATCTG ATTGGATCAA TAACTTTGTA 65322 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGTGTTGTT CAGCCCTTCC TTTACTTTGA GAACAATCTG ATTGGATCAA TAACTTTGTA 475 TTCAGTCATG GCCAAGTATA ATTGTAAGAA GGTACGTCTT TCGATATAAT TTTGGTTTCA 65382 |||||||||| |||||||||| |||||||||| | TTCAGTCATG GCCAAGTATA ATTGTAAGAA G......... .......... .......... 506 TATAAGTGAA ATATGCTATG CATTCAGGGC AAGTTGGAAT CTGTTATGTT CATGATTGCT 65442 .......... .......... .......... .......... .......... .......... 506 GCTACCCTTA TAGTTTTGGT AGAATTTGAA GGCTAATAGT AAACATGGTT CTTCTTTCAA 65502 .......... .......... .......... .......... .......... .......... 506 GAACTCATTT AGCCTCAAGA ACATGGGCGT TGCTAGGGGG CGGAAGGAGG TTCAGTTGTT 65562 .......... .......... .......... .......... .......... .......... 506 CATGGTGTGG CGAACTGTTG GATTCGTAGG AGGGTATTGA GTAGGTTGGT CAGGTTGATA 65622 .......... .......... .......... .......... .......... .......... 506 ACTTTTTAAT TTCATTGTGT GAAATTGCAG TTGGTTTTTT CATCATCTGC AACAGTTTAT 65682 |||||||||| |||||||||| |||||||||| .......... .......... .......... TTGGTTTTTT CATCATCTGC AACAGTTTAT 536 GGTCAGCCTG AAAAGGTTCC CTGTGTGGAG GATTTTGAAT TG 65724 |||||||||| |||||||||| |||||||||| |||||||||| || GGTCAGCCTG AAAAGGTTCC CTGTGTGGAG GATTTTGAAT TG 578 hqPGS_C08HBa0235H18.1+_SGN-E256622+ (64303 64622,65058 65107,65218 65353,65653 65724) ******************************************************************************** EST sequence 73 +strand 549 n (File: SGN-E263162+) 1 CTTTTTCCCT TTTTCTTCAC GTATCTTCTA CAACTAAAAA GAAAGAACCC CTTTTTTTCT 61 GATTTTCCAT AAAAATTGGT TCTTGAAAGG ATAAAGATTG AATCTTTGTT GTGTTTTATG 121 AAATGGGTGT TCAGTGTCAA GAAAATATTT TGGTGACTGG AGGAGCTGGT TTCATTGGAA 181 CACATACTGT GGTGCAGTTA CTGAATGAAG GGTTCAAAGT TACAATCATT GATAACTTTC 241 ATAATTCTGT GAAAGAAGCT GTTGATAGAG TCAGAGAATT AGTTGGTCCT CAACTTTCAC 301 AGAATCTTGA ATTCCATTTG GGTGATATTA GAAACAGAGA TGACTTGGAG AAGCTATTTT 361 CTAAGAAAGA GTTTGCTGCT GTGGTCCATT TTGCTGGGCT TAAGGCTGTT GGAGAGAGTG 421 TTGTTCANCC CTTCCTTTAC TTTGAGAACA ATCTGATTGG ATCAATAACT TTGTATTCAG 481 TCATGGCCAA GTATAATTGT AAGAAGTTGG TTTTTTCATC ATCTGCAACA GTTTATGGTC 541 AGCCTGAAA Predicted gene structure (within gDNA segment 63676 to 66305): Exon 1 64303 64622 ( 320 n); cDNA 1 320 ( 320 n); score: 1.000 Intron 1 64623 65057 ( 435 n); Pd: 0.981 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 65058 65107 ( 50 n); cDNA 321 370 ( 50 n); score: 1.000 Intron 2 65108 65217 ( 110 n); Pd: 0.963 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 3 65218 65353 ( 136 n); cDNA 371 506 ( 136 n); score: 0.993 Intron 3 65354 65652 ( 299 n); Pd: 0.969 (s: 1.00), Pa: 0.983 (s: 1.00) Exon 4 65653 65695 ( 43 n); cDNA 507 549 ( 43 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E263162+ 0.998 549 1.000 C PGS_C08HBa0235H18.1+_SGN-E263162+ (64303 64622,65058 65107,65218 65353,65653 65695) Alignment (genomic DNA sequence = upper lines): CTTTTTCCCT TTTTCTTCAC GTATCTTCTA CAACTAAAAA GAAAGAACCC CTTTTTTTCT 64362 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTTTCCCT TTTTCTTCAC GTATCTTCTA CAACTAAAAA GAAAGAACCC CTTTTTTTCT 60 GATTTTCCAT AAAAATTGGT TCTTGAAAGG ATAAAGATTG AATCTTTGTT GTGTTTTATG 64422 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATTTTCCAT AAAAATTGGT TCTTGAAAGG ATAAAGATTG AATCTTTGTT GTGTTTTATG 120 AAATGGGTGT TCAGTGTCAA GAAAATATTT TGGTGACTGG AGGAGCTGGT TTCATTGGAA 64482 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATGGGTGT TCAGTGTCAA GAAAATATTT TGGTGACTGG AGGAGCTGGT TTCATTGGAA 180 CACATACTGT GGTGCAGTTA CTGAATGAAG GGTTCAAAGT TACAATCATT GATAACTTTC 64542 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACATACTGT GGTGCAGTTA CTGAATGAAG GGTTCAAAGT TACAATCATT GATAACTTTC 240 ATAATTCTGT GAAAGAAGCT GTTGATAGAG TCAGAGAATT AGTTGGTCCT CAACTTTCAC 64602 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAATTCTGT GAAAGAAGCT GTTGATAGAG TCAGAGAATT AGTTGGTCCT CAACTTTCAC 300 AGAATCTTGA ATTCCATTTG GTATGATTTT TTTTTCAATC TTTTTTATTT TTTATCAAAC 64662 |||||||||| |||||||||| AGAATCTTGA ATTCCATTTG .......... .......... .......... .......... 320 CCGACATACA CCCTTTTTCT AAAAGCACAA ATTGTGGGTG GGGGGGGGGG GGGGGAGAAG 64722 .......... .......... .......... .......... .......... .......... 320 GAAGGAAATG TGAAAAAAAT GAGCTTTTGA GATGATCATG TGTGTGTTTT GTAGTCATTG 64782 .......... .......... .......... .......... .......... .......... 320 AATGTTTAAG GCTCCATCAT TAGCTTTTTG TGTCATTGTG TGTGTGTTTT TCATTGCTGC 64842 .......... .......... .......... .......... .......... .......... 320 CTTGTATCGT GTTGTTATCA TTTTCTTAAA AAAGTTATCT TTATTTTATT TTATAGGAAT 64902 .......... .......... .......... .......... .......... .......... 320 CTTGATAGCT CTGTGATTGT ACAACTAGTT CTTTTTAATC CTATTTTTTT TTTTTGTGAA 64962 .......... .......... .......... .......... .......... .......... 320 ATGAATGTTG ATCTTACATA CCTTGTATTC ACAATGCTAG AATTGTGTTT TTTCACCTTA 65022 .......... .......... .......... .......... .......... .......... 320 TCTGGGATTT TACCTTTGTT GCTTCTTGGT GGCAGGGTGA TATTAGAAAC AGAGATGACT 65082 ||||| |||||||||| |||||||||| .......... .......... .......... .....GGTGA TATTAGAAAC AGAGATGACT 345 TGGAGAAGCT ATTTTCTAAG AAAGAGTATG AAAATTTTCT TGTTTTCAAA TTATCTCCTG 65142 |||||||||| |||||||||| ||||| TGGAGAAGCT ATTTTCTAAG AAAGA..... .......... .......... .......... 370 CTGTTATTAT TTCCTTTGAA TGCATTTCTA TGGTGTGTTG TGATATTCAT TGTTTTGTTA 65202 .......... .......... .......... .......... .......... .......... 370 TATATATTGA AATAGGTTTG CTGCTGTGGT CCATTTTGCT GGGCTTAAGG CTGTTGGAGA 65262 ||||| |||||||||| |||||||||| |||||||||| |||||||||| .......... .....GTTTG CTGCTGTGGT CCATTTTGCT GGGCTTAAGG CTGTTGGAGA 415 GAGTGTTGTT CAGCCCTTCC TTTACTTTGA GAACAATCTG ATTGGATCAA TAACTTTGTA 65322 |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGTGTTGTT CANCCCTTCC TTTACTTTGA GAACAATCTG ATTGGATCAA TAACTTTGTA 475 TTCAGTCATG GCCAAGTATA ATTGTAAGAA GGTACGTCTT TCGATATAAT TTTGGTTTCA 65382 |||||||||| |||||||||| |||||||||| | TTCAGTCATG GCCAAGTATA ATTGTAAGAA G......... .......... .......... 506 TATAAGTGAA ATATGCTATG CATTCAGGGC AAGTTGGAAT CTGTTATGTT CATGATTGCT 65442 .......... .......... .......... .......... .......... .......... 506 GCTACCCTTA TAGTTTTGGT AGAATTTGAA GGCTAATAGT AAACATGGTT CTTCTTTCAA 65502 .......... .......... .......... .......... .......... .......... 506 GAACTCATTT AGCCTCAAGA ACATGGGCGT TGCTAGGGGG CGGAAGGAGG TTCAGTTGTT 65562 .......... .......... .......... .......... .......... .......... 506 CATGGTGTGG CGAACTGTTG GATTCGTAGG AGGGTATTGA GTAGGTTGGT CAGGTTGATA 65622 .......... .......... .......... .......... .......... .......... 506 ACTTTTTAAT TTCATTGTGT GAAATTGCAG TTGGTTTTTT CATCATCTGC AACAGTTTAT 65682 |||||||||| |||||||||| |||||||||| .......... .......... .......... TTGGTTTTTT CATCATCTGC AACAGTTTAT 536 GGTCAGCCTG AAA 65695 |||||||||| ||| GGTCAGCCTG AAA 549 hqPGS_C08HBa0235H18.1+_SGN-E263162+ (64303 64622,65058 65107,65218 65353,65653 65695) ******************************************************************************** EST sequence 376 +strand 414 n (File: SGN-E258215+) 1 CTTTTTCCCT TTTTCTTCAC GTATCTTCTA CAACTAAAAA GAAAGAACCC CTTTTTTTCT 61 GATTTTCCAT AAAAATTGGT TCTTGAAAGG ATAAAGATTG AATCTTTGTT GTGTTTTATG 121 AAATGGGTGT TCAGTGTCAA GAAAATATTT TGGTGACTGG AGGAGCTGGT TTCATTGGAA 181 CACATACTGT GGTGCAGTTA CTGAATGAAG GGTTCGAAGT TACAATCATT GATAACTTTC 241 ATAATTCTGT GAAAGAAGCT GTTGATAGAA TCAGAGAATT ATTTGGTCCT CTACTTTCAC 301 AGAATCTTGA ATTCCATTTG GGTGGTATTA TAAACAAACA TGACTTGGAG AAGCTATTTT 361 CTTTGAAAAA GAATGCTGCT GTGGTCCATT TTGCTGGGCT TAAAGCTGTT GGAA Predicted gene structure (within gDNA segment 63676 to 65970): Exon 1 64303 64622 ( 320 n); cDNA 1 320 ( 320 n); score: 0.988 Intron 1 64623 65057 ( 435 n); Pd: 0.981 (s: 0.96), Pa: 1.000 (s: 0.86) Exon 2 65058 65107 ( 50 n); cDNA 321 370 ( 50 n); score: 0.860 Intron 2 65108 65217 ( 110 n); Pd: 0.963 (s: 0.86), Pa: 1.000 (s: 0.93) Exon 3 65218 65260 ( 43 n); cDNA 371 413 ( 43 n); score: 0.930 MATCH C08HBa0235H18.1+ SGN-E258215+ 0.970 413 0.998 C PGS_C08HBa0235H18.1+_SGN-E258215+ (64303 64622,65058 65107,65218 65260) Alignment (genomic DNA sequence = upper lines): CTTTTTCCCT TTTTCTTCAC GTATCTTCTA CAACTAAAAA GAAAGAACCC CTTTTTTTCT 64362 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTTTCCCT TTTTCTTCAC GTATCTTCTA CAACTAAAAA GAAAGAACCC CTTTTTTTCT 60 GATTTTCCAT AAAAATTGGT TCTTGAAAGG ATAAAGATTG AATCTTTGTT GTGTTTTATG 64422 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATTTTCCAT AAAAATTGGT TCTTGAAAGG ATAAAGATTG AATCTTTGTT GTGTTTTATG 120 AAATGGGTGT TCAGTGTCAA GAAAATATTT TGGTGACTGG AGGAGCTGGT TTCATTGGAA 64482 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATGGGTGT TCAGTGTCAA GAAAATATTT TGGTGACTGG AGGAGCTGGT TTCATTGGAA 180 CACATACTGT GGTGCAGTTA CTGAATGAAG GGTTCAAAGT TACAATCATT GATAACTTTC 64542 |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| CACATACTGT GGTGCAGTTA CTGAATGAAG GGTTCGAAGT TACAATCATT GATAACTTTC 240 ATAATTCTGT GAAAGAAGCT GTTGATAGAG TCAGAGAATT AGTTGGTCCT CAACTTTCAC 64602 |||||||||| |||||||||| ||||||||| |||||||||| | |||||||| | |||||||| ATAATTCTGT GAAAGAAGCT GTTGATAGAA TCAGAGAATT ATTTGGTCCT CTACTTTCAC 300 AGAATCTTGA ATTCCATTTG GTATGATTTT TTTTTCAATC TTTTTTATTT TTTATCAAAC 64662 |||||||||| |||||||||| AGAATCTTGA ATTCCATTTG .......... .......... .......... .......... 320 CCGACATACA CCCTTTTTCT AAAAGCACAA ATTGTGGGTG GGGGGGGGGG GGGGGAGAAG 64722 .......... .......... .......... .......... .......... .......... 320 GAAGGAAATG TGAAAAAAAT GAGCTTTTGA GATGATCATG TGTGTGTTTT GTAGTCATTG 64782 .......... .......... .......... .......... .......... .......... 320 AATGTTTAAG GCTCCATCAT TAGCTTTTTG TGTCATTGTG TGTGTGTTTT TCATTGCTGC 64842 .......... .......... .......... .......... .......... .......... 320 CTTGTATCGT GTTGTTATCA TTTTCTTAAA AAAGTTATCT TTATTTTATT TTATAGGAAT 64902 .......... .......... .......... .......... .......... .......... 320 CTTGATAGCT CTGTGATTGT ACAACTAGTT CTTTTTAATC CTATTTTTTT TTTTTGTGAA 64962 .......... .......... .......... .......... .......... .......... 320 ATGAATGTTG ATCTTACATA CCTTGTATTC ACAATGCTAG AATTGTGTTT TTTCACCTTA 65022 .......... .......... .......... .......... .......... .......... 320 TCTGGGATTT TACCTTTGTT GCTTCTTGGT GGCAGGGTGA TATTAGAAAC AGAGATGACT 65082 |||| ||||| |||| | | |||||| .......... .......... .......... .....GGTGG TATTATAAAC AAACATGACT 345 TGGAGAAGCT ATTTTCTAAG AAAGAGTATG AAAATTTTCT TGTTTTCAAA TTATCTCCTG 65142 |||||||||| ||||||| | ||| | TGGAGAAGCT ATTTTCTTTG AAAAA..... .......... .......... .......... 370 CTGTTATTAT TTCCTTTGAA TGCATTTCTA TGGTGTGTTG TGATATTCAT TGTTTTGTTA 65202 .......... .......... .......... .......... .......... .......... 370 TATATATTGA AATAGGTTTG CTGCTGTGGT CCATTTTGCT GGGCTTAAGG CTGTTGGA 65260 | || |||||||||| |||||||||| |||||||| | |||||||| .......... .....GAATG CTGCTGTGGT CCATTTTGCT GGGCTTAAAG CTGTTGGA 413 hqPGS_C08HBa0235H18.1+_SGN-E258215+ (64303 64622,65058 65107,65218 65260) ******************************************************************************** EST sequence 386 +strand 549 n (File: SGN-E299689+) 1 TTTTTCCCTT TTTCTTCACG TATCTTCTAC AACTAAAAAG AAAGAACCCC TTTTTTTCTG 61 ATTTTCCATA AAAATTGGTT CTTGAAAGGA TAAAGATTGA ATCTTTGTTG TGTTTTATGA 121 AATGGGTGTT CAGTGTCAAG AAAATATTTT GGTGACTGGA GGAGCTGGTT TCATTGGAAC 181 ACATACTGTG GTGCAGTTAC TGAATGAAGG GTTCAAAGTT ACAATCATTG ATAACTTTCA 241 TAATTCTGTG AAAGAAGCTG TTGATAGAGT CAGAGAATTA GTTGGTCCTC AACTTTCACA 301 GAATCTTGAA TTCCATTTGG GTGATATTAG AAACAGAGAT GACTTGGAGA AGCTATTTTC 361 TAAGAAAGAG TTTGCTGCTG TGGTCCATTT TGCTGGGCTT AAGGCTGTTG GAGAGAGTGT 421 TGTTCAGCCC TTCCTTTACT TTGAGAACAA TCTGATTGGA TCAATAACTT TGTATTCAGT 481 CATGGCCAAG TATAATTGTA AGAAGTTGGT TTTTTCATCA TCTGCAACAG TTTATGGTCA 541 GCCTGAAAA Predicted gene structure (within gDNA segment 63686 to 66306): Exon 1 64304 64622 ( 319 n); cDNA 1 319 ( 319 n); score: 1.000 Intron 1 64623 65057 ( 435 n); Pd: 0.981 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 65058 65107 ( 50 n); cDNA 320 369 ( 50 n); score: 1.000 Intron 2 65108 65217 ( 110 n); Pd: 0.963 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 3 65218 65353 ( 136 n); cDNA 370 505 ( 136 n); score: 1.000 Intron 3 65354 65652 ( 299 n); Pd: 0.969 (s: 1.00), Pa: 0.983 (s: 1.00) Exon 4 65653 65696 ( 44 n); cDNA 506 549 ( 44 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E299689+ 1.000 549 1.000 C PGS_C08HBa0235H18.1+_SGN-E299689+ (64304 64622,65058 65107,65218 65353,65653 65696) Alignment (genomic DNA sequence = upper lines): TTTTTCCCTT TTTCTTCACG TATCTTCTAC AACTAAAAAG AAAGAACCCC TTTTTTTCTG 64363 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTTCCCTT TTTCTTCACG TATCTTCTAC AACTAAAAAG AAAGAACCCC TTTTTTTCTG 60 ATTTTCCATA AAAATTGGTT CTTGAAAGGA TAAAGATTGA ATCTTTGTTG TGTTTTATGA 64423 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTTCCATA AAAATTGGTT CTTGAAAGGA TAAAGATTGA ATCTTTGTTG TGTTTTATGA 120 AATGGGTGTT CAGTGTCAAG AAAATATTTT GGTGACTGGA GGAGCTGGTT TCATTGGAAC 64483 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGGGTGTT CAGTGTCAAG AAAATATTTT GGTGACTGGA GGAGCTGGTT TCATTGGAAC 180 ACATACTGTG GTGCAGTTAC TGAATGAAGG GTTCAAAGTT ACAATCATTG ATAACTTTCA 64543 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATACTGTG GTGCAGTTAC TGAATGAAGG GTTCAAAGTT ACAATCATTG ATAACTTTCA 240 TAATTCTGTG AAAGAAGCTG TTGATAGAGT CAGAGAATTA GTTGGTCCTC AACTTTCACA 64603 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATTCTGTG AAAGAAGCTG TTGATAGAGT CAGAGAATTA GTTGGTCCTC AACTTTCACA 300 GAATCTTGAA TTCCATTTGG TATGATTTTT TTTTCAATCT TTTTTATTTT TTATCAAACC 64663 |||||||||| ||||||||| GAATCTTGAA TTCCATTTG. .......... .......... .......... .......... 319 CGACATACAC CCTTTTTCTA AAAGCACAAA TTGTGGGTGG GGGGGGGGGG GGGGAGAAGG 64723 .......... .......... .......... .......... .......... .......... 319 AAGGAAATGT GAAAAAAATG AGCTTTTGAG ATGATCATGT GTGTGTTTTG TAGTCATTGA 64783 .......... .......... .......... .......... .......... .......... 319 ATGTTTAAGG CTCCATCATT AGCTTTTTGT GTCATTGTGT GTGTGTTTTT CATTGCTGCC 64843 .......... .......... .......... .......... .......... .......... 319 TTGTATCGTG TTGTTATCAT TTTCTTAAAA AAGTTATCTT TATTTTATTT TATAGGAATC 64903 .......... .......... .......... .......... .......... .......... 319 TTGATAGCTC TGTGATTGTA CAACTAGTTC TTTTTAATCC TATTTTTTTT TTTTGTGAAA 64963 .......... .......... .......... .......... .......... .......... 319 TGAATGTTGA TCTTACATAC CTTGTATTCA CAATGCTAGA ATTGTGTTTT TTCACCTTAT 65023 .......... .......... .......... .......... .......... .......... 319 CTGGGATTTT ACCTTTGTTG CTTCTTGGTG GCAGGGTGAT ATTAGAAACA GAGATGACTT 65083 |||||| |||||||||| |||||||||| .......... .......... .......... ....GGTGAT ATTAGAAACA GAGATGACTT 345 GGAGAAGCTA TTTTCTAAGA AAGAGTATGA AAATTTTCTT GTTTTCAAAT TATCTCCTGC 65143 |||||||||| |||||||||| |||| GGAGAAGCTA TTTTCTAAGA AAGA...... .......... .......... .......... 369 TGTTATTATT TCCTTTGAAT GCATTTCTAT GGTGTGTTGT GATATTCATT GTTTTGTTAT 65203 .......... .......... .......... .......... .......... .......... 369 ATATATTGAA ATAGGTTTGC TGCTGTGGTC CATTTTGCTG GGCTTAAGGC TGTTGGAGAG 65263 |||||| |||||||||| |||||||||| |||||||||| |||||||||| .......... ....GTTTGC TGCTGTGGTC CATTTTGCTG GGCTTAAGGC TGTTGGAGAG 415 AGTGTTGTTC AGCCCTTCCT TTACTTTGAG AACAATCTGA TTGGATCAAT AACTTTGTAT 65323 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTGTTGTTC AGCCCTTCCT TTACTTTGAG AACAATCTGA TTGGATCAAT AACTTTGTAT 475 TCAGTCATGG CCAAGTATAA TTGTAAGAAG GTACGTCTTT CGATATAATT TTGGTTTCAT 65383 |||||||||| |||||||||| |||||||||| TCAGTCATGG CCAAGTATAA TTGTAAGAAG .......... .......... .......... 505 ATAAGTGAAA TATGCTATGC ATTCAGGGCA AGTTGGAATC TGTTATGTTC ATGATTGCTG 65443 .......... .......... .......... .......... .......... .......... 505 CTACCCTTAT AGTTTTGGTA GAATTTGAAG GCTAATAGTA AACATGGTTC TTCTTTCAAG 65503 .......... .......... .......... .......... .......... .......... 505 AACTCATTTA GCCTCAAGAA CATGGGCGTT GCTAGGGGGC GGAAGGAGGT TCAGTTGTTC 65563 .......... .......... .......... .......... .......... .......... 505 ATGGTGTGGC GAACTGTTGG ATTCGTAGGA GGGTATTGAG TAGGTTGGTC AGGTTGATAA 65623 .......... .......... .......... .......... .......... .......... 505 CTTTTTAATT TCATTGTGTG AAATTGCAGT TGGTTTTTTC ATCATCTGCA ACAGTTTATG 65683 | |||||||||| |||||||||| |||||||||| .......... .......... .........T TGGTTTTTTC ATCATCTGCA ACAGTTTATG 536 GTCAGCCTGA AAA 65696 |||||||||| ||| GTCAGCCTGA AAA 549 hqPGS_C08HBa0235H18.1+_SGN-E299689+ (64304 64622,65058 65107,65218 65353,65653 65696) ******************************************************************************** EST sequence 244 +strand 395 n (File: SGN-E224382+) 1 TTTTTTTTTT TTTTTTCACG TATCTTCTAC AACTAAAAAG AAAGAACCCC TTTTTTTCTG 61 ATTTTCCATA AAAATTGGTT CTTGAAAGGA TAAAGATTGA ATCTTTGTTG TGTTTTATGA 121 AATGGGTGTT CAGTGTCAAG AAAATATTTT GGTGACTGGA GGAGCTGGTT TCATTGGAAC 181 ACATACTGTG GTGCAGTTAC TGAATGAAGG GTTCAAAGTT ACAATCATTG ATAACTTTCA 241 TAATTCTGTG AAAGAAGCTG TTGATAGAGT CAGAGAATTA GTTGGTCCTC AACTTTCACA 301 GAATCTTGAA TTCCATTTGG GTGATATTAG AAACAGAGAT GACTTGGAGA AGCTATTTTC 361 TAAGAAAGAG TTTGCTGCTG TGGTCCATTT TGCTG Predicted gene structure (within gDNA segment 63578 to 65959): Exon 1 64304 64622 ( 319 n); cDNA 1 319 ( 319 n); score: 0.987 Intron 1 64623 65057 ( 435 n); Pd: 0.981 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 65058 65107 ( 50 n); cDNA 320 369 ( 50 n); score: 1.000 Intron 2 65108 65217 ( 110 n); Pd: 0.963 (s: 1.00), Pa: 1.000 (s: 0) Exon 3 65218 65243 ( 26 n); cDNA 370 395 ( 26 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E224382+ 0.989 395 1.000 C PGS_C08HBa0235H18.1+_SGN-E224382+ (64304 64622,65058 65107,65218 65243) Alignment (genomic DNA sequence = upper lines): TTTTTCCCTT TTTCTTCACG TATCTTCTAC AACTAAAAAG AAAGAACCCC TTTTTTTCTG 64363 ||||| || ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTTTTTTT TTTTTTCACG TATCTTCTAC AACTAAAAAG AAAGAACCCC TTTTTTTCTG 60 ATTTTCCATA AAAATTGGTT CTTGAAAGGA TAAAGATTGA ATCTTTGTTG TGTTTTATGA 64423 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTTCCATA AAAATTGGTT CTTGAAAGGA TAAAGATTGA ATCTTTGTTG TGTTTTATGA 120 AATGGGTGTT CAGTGTCAAG AAAATATTTT GGTGACTGGA GGAGCTGGTT TCATTGGAAC 64483 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGGGTGTT CAGTGTCAAG AAAATATTTT GGTGACTGGA GGAGCTGGTT TCATTGGAAC 180 ACATACTGTG GTGCAGTTAC TGAATGAAGG GTTCAAAGTT ACAATCATTG ATAACTTTCA 64543 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATACTGTG GTGCAGTTAC TGAATGAAGG GTTCAAAGTT ACAATCATTG ATAACTTTCA 240 TAATTCTGTG AAAGAAGCTG TTGATAGAGT CAGAGAATTA GTTGGTCCTC AACTTTCACA 64603 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATTCTGTG AAAGAAGCTG TTGATAGAGT CAGAGAATTA GTTGGTCCTC AACTTTCACA 300 GAATCTTGAA TTCCATTTGG TATGATTTTT TTTTCAATCT TTTTTATTTT TTATCAAACC 64663 |||||||||| ||||||||| GAATCTTGAA TTCCATTTG. .......... .......... .......... .......... 319 CGACATACAC CCTTTTTCTA AAAGCACAAA TTGTGGGTGG GGGGGGGGGG GGGGAGAAGG 64723 .......... .......... .......... .......... .......... .......... 319 AAGGAAATGT GAAAAAAATG AGCTTTTGAG ATGATCATGT GTGTGTTTTG TAGTCATTGA 64783 .......... .......... .......... .......... .......... .......... 319 ATGTTTAAGG CTCCATCATT AGCTTTTTGT GTCATTGTGT GTGTGTTTTT CATTGCTGCC 64843 .......... .......... .......... .......... .......... .......... 319 TTGTATCGTG TTGTTATCAT TTTCTTAAAA AAGTTATCTT TATTTTATTT TATAGGAATC 64903 .......... .......... .......... .......... .......... .......... 319 TTGATAGCTC TGTGATTGTA CAACTAGTTC TTTTTAATCC TATTTTTTTT TTTTGTGAAA 64963 .......... .......... .......... .......... .......... .......... 319 TGAATGTTGA TCTTACATAC CTTGTATTCA CAATGCTAGA ATTGTGTTTT TTCACCTTAT 65023 .......... .......... .......... .......... .......... .......... 319 CTGGGATTTT ACCTTTGTTG CTTCTTGGTG GCAGGGTGAT ATTAGAAACA GAGATGACTT 65083 |||||| |||||||||| |||||||||| .......... .......... .......... ....GGTGAT ATTAGAAACA GAGATGACTT 345 GGAGAAGCTA TTTTCTAAGA AAGAGTATGA AAATTTTCTT GTTTTCAAAT TATCTCCTGC 65143 |||||||||| |||||||||| |||| GGAGAAGCTA TTTTCTAAGA AAGA...... .......... .......... .......... 369 TGTTATTATT TCCTTTGAAT GCATTTCTAT GGTGTGTTGT GATATTCATT GTTTTGTTAT 65203 .......... .......... .......... .......... .......... .......... 369 ATATATTGAA ATAGGTTTGC TGCTGTGGTC CATTTTGCTG 65243 |||||| |||||||||| |||||||||| .......... ....GTTTGC TGCTGTGGTC CATTTTGCTG 395 hqPGS_C08HBa0235H18.1+_SGN-E224382+ (64304 64622,65058 65107,65218 65243) ******************************************************************************** EST sequence 245 +strand 394 n (File: SGN-E224882+) 1 TTTTTTTTTT TTTTTTCACG TATCTTCTAC AACTAAAAAG AAAGAACCCC TTTTTTTCTG 61 ATTTTCCATA AAAATTGGTT CTTGAAAGGA TAAAGATTGA ATCTTTGTTG TGTTTTATGA 121 AATGGGTGTT CAGTGTCAAG AAAATATTTT GGTGACTGGA GGAGCTGGTT TCATTGGAAC 181 ACATACTGTG GTGCAGTTAC TGAATGAAGG GTTCAAAGTT ACAATCATTG ATAACTTTCA 241 TAATTCTGTG AAAGAAGCTG TTGATAGAGT CAGAGAATTA GTTGGTCCTC AACTTTCACA 301 GAATCTTGAA TTCCATTTGG GTGATATTAG AAACAGAGAT GACTTGGAGA AGCTATTTTC 361 TAAGAAAGAG TTTGCTGCTG TGGTCCATTT TGCT Predicted gene structure (within gDNA segment 63578 to 65949): Exon 1 64304 64622 ( 319 n); cDNA 1 319 ( 319 n); score: 0.987 Intron 1 64623 65057 ( 435 n); Pd: 0.981 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 65058 65107 ( 50 n); cDNA 320 369 ( 50 n); score: 1.000 Intron 2 65108 65217 ( 110 n); Pd: 0.963 (s: 1.00), Pa: 1.000 (s: 0) Exon 3 65218 65242 ( 25 n); cDNA 370 394 ( 25 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E224882+ 0.989 394 1.000 C PGS_C08HBa0235H18.1+_SGN-E224882+ (64304 64622,65058 65107,65218 65242) Alignment (genomic DNA sequence = upper lines): TTTTTCCCTT TTTCTTCACG TATCTTCTAC AACTAAAAAG AAAGAACCCC TTTTTTTCTG 64363 ||||| || ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTTTTTTT TTTTTTCACG TATCTTCTAC AACTAAAAAG AAAGAACCCC TTTTTTTCTG 60 ATTTTCCATA AAAATTGGTT CTTGAAAGGA TAAAGATTGA ATCTTTGTTG TGTTTTATGA 64423 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTTCCATA AAAATTGGTT CTTGAAAGGA TAAAGATTGA ATCTTTGTTG TGTTTTATGA 120 AATGGGTGTT CAGTGTCAAG AAAATATTTT GGTGACTGGA GGAGCTGGTT TCATTGGAAC 64483 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGGGTGTT CAGTGTCAAG AAAATATTTT GGTGACTGGA GGAGCTGGTT TCATTGGAAC 180 ACATACTGTG GTGCAGTTAC TGAATGAAGG GTTCAAAGTT ACAATCATTG ATAACTTTCA 64543 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATACTGTG GTGCAGTTAC TGAATGAAGG GTTCAAAGTT ACAATCATTG ATAACTTTCA 240 TAATTCTGTG AAAGAAGCTG TTGATAGAGT CAGAGAATTA GTTGGTCCTC AACTTTCACA 64603 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATTCTGTG AAAGAAGCTG TTGATAGAGT CAGAGAATTA GTTGGTCCTC AACTTTCACA 300 GAATCTTGAA TTCCATTTGG TATGATTTTT TTTTCAATCT TTTTTATTTT TTATCAAACC 64663 |||||||||| ||||||||| GAATCTTGAA TTCCATTTG. .......... .......... .......... .......... 319 CGACATACAC CCTTTTTCTA AAAGCACAAA TTGTGGGTGG GGGGGGGGGG GGGGAGAAGG 64723 .......... .......... .......... .......... .......... .......... 319 AAGGAAATGT GAAAAAAATG AGCTTTTGAG ATGATCATGT GTGTGTTTTG TAGTCATTGA 64783 .......... .......... .......... .......... .......... .......... 319 ATGTTTAAGG CTCCATCATT AGCTTTTTGT GTCATTGTGT GTGTGTTTTT CATTGCTGCC 64843 .......... .......... .......... .......... .......... .......... 319 TTGTATCGTG TTGTTATCAT TTTCTTAAAA AAGTTATCTT TATTTTATTT TATAGGAATC 64903 .......... .......... .......... .......... .......... .......... 319 TTGATAGCTC TGTGATTGTA CAACTAGTTC TTTTTAATCC TATTTTTTTT TTTTGTGAAA 64963 .......... .......... .......... .......... .......... .......... 319 TGAATGTTGA TCTTACATAC CTTGTATTCA CAATGCTAGA ATTGTGTTTT TTCACCTTAT 65023 .......... .......... .......... .......... .......... .......... 319 CTGGGATTTT ACCTTTGTTG CTTCTTGGTG GCAGGGTGAT ATTAGAAACA GAGATGACTT 65083 |||||| |||||||||| |||||||||| .......... .......... .......... ....GGTGAT ATTAGAAACA GAGATGACTT 345 GGAGAAGCTA TTTTCTAAGA AAGAGTATGA AAATTTTCTT GTTTTCAAAT TATCTCCTGC 65143 |||||||||| |||||||||| |||| GGAGAAGCTA TTTTCTAAGA AAGA...... .......... .......... .......... 369 TGTTATTATT TCCTTTGAAT GCATTTCTAT GGTGTGTTGT GATATTCATT GTTTTGTTAT 65203 .......... .......... .......... .......... .......... .......... 369 ATATATTGAA ATAGGTTTGC TGCTGTGGTC CATTTTGCT 65242 |||||| |||||||||| ||||||||| .......... ....GTTTGC TGCTGTGGTC CATTTTGCT 394 hqPGS_C08HBa0235H18.1+_SGN-E224882+ (64304 64622,65058 65107,65218 65242) ******************************************************************************** EST sequence 43 +strand 285 n (File: SGN-E293389+) 1 ACTTTCACAG AATCTTGAAT TCCATTTGGG TGATATTAGA AACAGAGATG ACTTGGAGAA 61 GCTATTTTCT AAGAAAGAGT TTGCTGCTGT GGTCCATTTT GCTGGGCTTA AGGCTGTTGG 121 AGAGAGTGTT GTTCAGCCCT TCCTTTACTT TGAGAACAAT CTGATTGGAT CAATAACTTT 181 GTATTCAGTC ATGGCCAAGT ATAATTGTAA GAAGTTGGTT TTTTCATCAT CTGCAACAGT 241 TTATGGTCAG CCTGAAAAGG TTCCCTGTGT GGAGGATTTT GAATT Predicted gene structure (within gDNA segment 64187 to 66333): Exon 1 64595 64622 ( 28 n); cDNA 1 28 ( 28 n); score: 1.000 Intron 1 64623 65057 ( 435 n); Pd: 0.981 (s: 0), Pa: 1.000 (s: 1.00) Exon 2 65058 65107 ( 50 n); cDNA 29 78 ( 50 n); score: 1.000 Intron 2 65108 65217 ( 110 n); Pd: 0.963 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 3 65218 65353 ( 136 n); cDNA 79 214 ( 136 n); score: 1.000 Intron 3 65354 65652 ( 299 n); Pd: 0.969 (s: 1.00), Pa: 0.983 (s: 1.00) Exon 4 65653 65723 ( 71 n); cDNA 215 285 ( 71 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E293389+ 1.000 285 1.000 C PGS_C08HBa0235H18.1+_SGN-E293389+ (64595 64622,65058 65107,65218 65353,65653 65723) Alignment (genomic DNA sequence = upper lines): ACTTTCACAG AATCTTGAAT TCCATTTGGT ATGATTTTTT TTTCAATCTT TTTTATTTTT 64654 |||||||||| |||||||||| |||||||| ACTTTCACAG AATCTTGAAT TCCATTTG.. .......... .......... .......... 28 TATCAAACCC GACATACACC CTTTTTCTAA AAGCACAAAT TGTGGGTGGG GGGGGGGGGG 64714 .......... .......... .......... .......... .......... .......... 28 GGGAGAAGGA AGGAAATGTG AAAAAAATGA GCTTTTGAGA TGATCATGTG TGTGTTTTGT 64774 .......... .......... .......... .......... .......... .......... 28 AGTCATTGAA TGTTTAAGGC TCCATCATTA GCTTTTTGTG TCATTGTGTG TGTGTTTTTC 64834 .......... .......... .......... .......... .......... .......... 28 ATTGCTGCCT TGTATCGTGT TGTTATCATT TTCTTAAAAA AGTTATCTTT ATTTTATTTT 64894 .......... .......... .......... .......... .......... .......... 28 ATAGGAATCT TGATAGCTCT GTGATTGTAC AACTAGTTCT TTTTAATCCT ATTTTTTTTT 64954 .......... .......... .......... .......... .......... .......... 28 TTTGTGAAAT GAATGTTGAT CTTACATACC TTGTATTCAC AATGCTAGAA TTGTGTTTTT 65014 .......... .......... .......... .......... .......... .......... 28 TCACCTTATC TGGGATTTTA CCTTTGTTGC TTCTTGGTGG CAGGGTGATA TTAGAAACAG 65074 ||||||| |||||||||| .......... .......... .......... .......... ...GGTGATA TTAGAAACAG 45 AGATGACTTG GAGAAGCTAT TTTCTAAGAA AGAGTATGAA AATTTTCTTG TTTTCAAATT 65134 |||||||||| |||||||||| |||||||||| ||| AGATGACTTG GAGAAGCTAT TTTCTAAGAA AGA....... .......... .......... 78 ATCTCCTGCT GTTATTATTT CCTTTGAATG CATTTCTATG GTGTGTTGTG ATATTCATTG 65194 .......... .......... .......... .......... .......... .......... 78 TTTTGTTATA TATATTGAAA TAGGTTTGCT GCTGTGGTCC ATTTTGCTGG GCTTAAGGCT 65254 ||||||| |||||||||| |||||||||| |||||||||| .......... .......... ...GTTTGCT GCTGTGGTCC ATTTTGCTGG GCTTAAGGCT 115 GTTGGAGAGA GTGTTGTTCA GCCCTTCCTT TACTTTGAGA ACAATCTGAT TGGATCAATA 65314 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGGAGAGA GTGTTGTTCA GCCCTTCCTT TACTTTGAGA ACAATCTGAT TGGATCAATA 175 ACTTTGTATT CAGTCATGGC CAAGTATAAT TGTAAGAAGG TACGTCTTTC GATATAATTT 65374 |||||||||| |||||||||| |||||||||| ||||||||| ACTTTGTATT CAGTCATGGC CAAGTATAAT TGTAAGAAG. .......... .......... 214 TGGTTTCATA TAAGTGAAAT ATGCTATGCA TTCAGGGCAA GTTGGAATCT GTTATGTTCA 65434 .......... .......... .......... .......... .......... .......... 214 TGATTGCTGC TACCCTTATA GTTTTGGTAG AATTTGAAGG CTAATAGTAA ACATGGTTCT 65494 .......... .......... .......... .......... .......... .......... 214 TCTTTCAAGA ACTCATTTAG CCTCAAGAAC ATGGGCGTTG CTAGGGGGCG GAAGGAGGTT 65554 .......... .......... .......... .......... .......... .......... 214 CAGTTGTTCA TGGTGTGGCG AACTGTTGGA TTCGTAGGAG GGTATTGAGT AGGTTGGTCA 65614 .......... .......... .......... .......... .......... .......... 214 GGTTGATAAC TTTTTAATTT CATTGTGTGA AATTGCAGTT GGTTTTTTCA TCATCTGCAA 65674 || |||||||||| |||||||||| .......... .......... .......... ........TT GGTTTTTTCA TCATCTGCAA 236 CAGTTTATGG TCAGCCTGAA AAGGTTCCCT GTGTGGAGGA TTTTGAATT 65723 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| CAGTTTATGG TCAGCCTGAA AAGGTTCCCT GTGTGGAGGA TTTTGAATT 285 hqPGS_C08HBa0235H18.1+_SGN-E293389+ (64595 64622,65058 65107,65218 65353,65653 65723) ******************************************************************************** EST sequence 374 +strand 519 n (File: SGN-E247844+) 1 TTGCTGCTGT GGTCCATTTT GCTGGGCTTA AGGCTGTGGG AGAGGGTGTT GTTCAGCCCT 61 TCCTTTACTT TGAGAACAAT CTGATTGGAT CAATAACTTT GTATTCAGTC ATGGCCAAGT 121 ATAATTGTAA GAAGTTGGTT TTTTCATCAT CTGCAACAGT TTATGGTCAG CCTGAAAAGG 181 TTCCCTGTGT GGAGGATTTT GAATTGAAGG CTATGAATCC TTATGGTCGA ACAAAGCTAT 241 TTCTTGAAGA TATTGCACGG GATATCCAGA AGGCTGATCA AGAATGGAAT ATCATACTGT 301 TGAGGTATTT CAACCCGGTA GGAGCTCATG AAAGTGGCAA ACTCGGGGAA GATCCAAAGG 361 GCATTCCGAA CAATCTTATG CCTTACATTC AGCAAGTAGC TGTTGGTAGA TTGCCGGAGT 421 TGAATGTATA TGGCAACGAC TACCCTACAC CTGATGGTAC CGCGATACGA GATTATATCC 481 ATGTTATGGA TTTGGCGGAC GGTCATGTTG TTGCACTTC Predicted gene structure (within gDNA segment 64620 to 67051): Exon 1 65220 65353 ( 134 n); cDNA 1 134 ( 134 n); score: 0.985 Intron 1 65354 65652 ( 299 n); Pd: 0.969 (s: 1.00), Pa: 0.983 (s: 1.00) Exon 2 65653 65754 ( 102 n); cDNA 135 236 ( 102 n); score: 1.000 Intron 2 65755 65869 ( 115 n); Pd: 0.999 (s: 1.00), Pa: 0.993 (s: 1.00) Exon 3 65870 66097 ( 228 n); cDNA 237 464 ( 228 n); score: 1.000 Intron 3 66098 66386 ( 289 n); Pd: 0.982 (s: 1.00), Pa: 0.970 (s: 1.00) Exon 4 66387 66441 ( 55 n); cDNA 465 519 ( 55 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E247844+ 0.996 519 1.000 C PGS_C08HBa0235H18.1+_SGN-E247844+ (65220 65353,65653 65754,65870 66097,66387 66441) Alignment (genomic DNA sequence = upper lines): TTGCTGCTGT GGTCCATTTT GCTGGGCTTA AGGCTGTTGG AGAGAGTGTT GTTCAGCCCT 65279 |||||||||| |||||||||| |||||||||| ||||||| || |||| ||||| |||||||||| TTGCTGCTGT GGTCCATTTT GCTGGGCTTA AGGCTGTGGG AGAGGGTGTT GTTCAGCCCT 60 TCCTTTACTT TGAGAACAAT CTGATTGGAT CAATAACTTT GTATTCAGTC ATGGCCAAGT 65339 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTTTACTT TGAGAACAAT CTGATTGGAT CAATAACTTT GTATTCAGTC ATGGCCAAGT 120 ATAATTGTAA GAAGGTACGT CTTTCGATAT AATTTTGGTT TCATATAAGT GAAATATGCT 65399 |||||||||| |||| ATAATTGTAA GAAG...... .......... .......... .......... .......... 134 ATGCATTCAG GGCAAGTTGG AATCTGTTAT GTTCATGATT GCTGCTACCC TTATAGTTTT 65459 .......... .......... .......... .......... .......... .......... 134 GGTAGAATTT GAAGGCTAAT AGTAAACATG GTTCTTCTTT CAAGAACTCA TTTAGCCTCA 65519 .......... .......... .......... .......... .......... .......... 134 AGAACATGGG CGTTGCTAGG GGGCGGAAGG AGGTTCAGTT GTTCATGGTG TGGCGAACTG 65579 .......... .......... .......... .......... .......... .......... 134 TTGGATTCGT AGGAGGGTAT TGAGTAGGTT GGTCAGGTTG ATAACTTTTT AATTTCATTG 65639 .......... .......... .......... .......... .......... .......... 134 TGTGAAATTG CAGTTGGTTT TTTCATCATC TGCAACAGTT TATGGTCAGC CTGAAAAGGT 65699 ||||||| |||||||||| |||||||||| |||||||||| |||||||||| .......... ...TTGGTTT TTTCATCATC TGCAACAGTT TATGGTCAGC CTGAAAAGGT 181 TCCCTGTGTG GAGGATTTTG AATTGAAGGC TATGAATCCT TATGGTCGAA CAAAGGTTTG 65759 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| TCCCTGTGTG GAGGATTTTG AATTGAAGGC TATGAATCCT TATGGTCGAA CAAAG..... 236 TATTGTCAAT AATTGTCTCT TAATTTCATA CTGATTAGAG ATAGTTCATT TGATAGTATC 65819 .......... .......... .......... .......... .......... .......... 236 TCAGTCTGTA AACTATGTGA CCGAACCTGT GTTTTGTTCT ATTTAATTAG CTATTTCTTG 65879 |||||||||| .......... .......... .......... .......... .......... CTATTTCTTG 246 AAGATATTGC ACGGGATATC CAGAAGGCTG ATCAAGAATG GAATATCATA CTGTTGAGGT 65939 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGATATTGC ACGGGATATC CAGAAGGCTG ATCAAGAATG GAATATCATA CTGTTGAGGT 306 ATTTCAACCC GGTAGGAGCT CATGAAAGTG GCAAACTCGG GGAAGATCCA AAGGGCATTC 65999 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTCAACCC GGTAGGAGCT CATGAAAGTG GCAAACTCGG GGAAGATCCA AAGGGCATTC 366 CGAACAATCT TATGCCTTAC ATTCAGCAAG TAGCTGTTGG TAGATTGCCG GAGTTGAATG 66059 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGAACAATCT TATGCCTTAC ATTCAGCAAG TAGCTGTTGG TAGATTGCCG GAGTTGAATG 426 TATATGGCAA CGACTACCCT ACACCTGATG GTACCGCGGT AGGTTATGTT TGGCTGATTC 66119 |||||||||| |||||||||| |||||||||| |||||||| TATATGGCAA CGACTACCCT ACACCTGATG GTACCGCG.. .......... .......... 464 TTTGTGACTG TAGCTTCTTT GTATGAGGAA AAAAAAGAAA CTGAATGACT CAACATACCA 66179 .......... .......... .......... .......... .......... .......... 464 TCTGTGACTA GAGTACATAC GAAAGAAACA GAAAATGAAG AGCGAGCAGA AGTTAACAGC 66239 .......... .......... .......... .......... .......... .......... 464 CGGAACAACT TATTGAACTA CTAATAATGA AGAGAAAAGA CAGAAATATA GTTGAATATC 66299 .......... .......... .......... .......... .......... .......... 464 CAAATATACT CATGACATGA ATCACCTTTA ACATATTTTG CTTCTTGTAC TTGACTGTTA 66359 .......... .......... .......... .......... .......... .......... 464 AATGATCTTT AATCTATTTC TCACTAGATA CGAGATTATA TCCATGTTAT GGATTTGGCG 66419 ||| |||||||||| |||||||||| |||||||||| .......... .......... .......ATA CGAGATTATA TCCATGTTAT GGATTTGGCG 497 GACGGTCATG TTGTTGCACT TC 66441 |||||||||| |||||||||| || GACGGTCATG TTGTTGCACT TC 519 hqPGS_C08HBa0235H18.1+_SGN-E247844+ (65220 65353,65653 65754,65870 66097,66387 66441) ******************************************************************************** EST sequence 185 +strand 611 n (File: SGN-E297537+) 1 TTGGAGAGAG TGTTGTTCAT CCCTTCCTTT ACTTTGAGAA CAATCTGATT GGATCAATAA 61 CTTTGTATTC AGTCATGGCC AAGTATAATT GTAAGAAGTT GGTTTTTTCA TCATCTGCAA 121 CAGTTTATGG TCAGCCTGAA AAGGTTCCCT GTGTGGAGGA TTTTGAATTG AAGGCTATGA 181 ATCCTTATGG TCGAACAAAG CTATTTCTTG AAGATATTGC ACGGGATATC CAGAAGGCTG 241 ATCAAGAATG GAATATCATA CTGTTGAGGT ATTTCAACCC GGTAGGAGCT CATGAAAGTG 301 GCAAACTCGG GGAAGATCCA AAGGGCATTC CGAACAATCT TATGCCTTAC ATTCAGCAAG 361 TAGCTGTTGG TAGATTGCCG GAGTTGAATG TATATGGCAA CGACTACCCT ACACCTGATG 421 GTACCGCGAT ACGAGATTAT ATCCATGTTA TGGATTTGGC GGACGGTCAT GTTGTTGCAC 481 TTCAGAGACT TCTAAGGCAG AATCACATAG GTTGTGTTGC CTACAATTTG GGTACTGGAA 541 AAGGCAAATC TGTCCTAGAG ATGGTTGGTG CCTTTGAAAA GGCGTCTGGA AAGAAAATCC 601 CGCTTAAAAT G Predicted gene structure (within gDNA segment 64656 to 67496): Exon 1 65256 65353 ( 98 n); cDNA 1 98 ( 98 n); score: 0.990 Intron 1 65354 65652 ( 299 n); Pd: 0.969 (s: 1.00), Pa: 0.983 (s: 1.00) Exon 2 65653 65754 ( 102 n); cDNA 99 200 ( 102 n); score: 1.000 Intron 2 65755 65869 ( 115 n); Pd: 0.999 (s: 1.00), Pa: 0.993 (s: 1.00) Exon 3 65870 66097 ( 228 n); cDNA 201 428 ( 228 n); score: 1.000 Intron 3 66098 66386 ( 289 n); Pd: 0.982 (s: 1.00), Pa: 0.970 (s: 1.00) Exon 4 66387 66468 ( 82 n); cDNA 429 510 ( 82 n); score: 1.000 Intron 4 66469 66623 ( 155 n); Pd: 0.998 (s: 1.00), Pa: 0.979 (s: 1.00) Exon 5 66624 66706 ( 83 n); cDNA 511 593 ( 83 n); score: 1.000 Intron 5 66707 66801 ( 95 n); Pd: 0.000 (s: 1.00), Pa: 0.997 (s: 0) Exon 6 66802 66819 ( 18 n); cDNA 594 611 ( 18 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E297537+ 0.998 611 1.000 C PGS_C08HBa0235H18.1+_SGN-E297537+ (65256 65353,65653 65754,65870 66097,66387 66468,66624 66706,66802 66819) Alignment (genomic DNA sequence = upper lines): TTGGAGAGAG TGTTGTTCAG CCCTTCCTTT ACTTTGAGAA CAATCTGATT GGATCAATAA 65315 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGAGAGAG TGTTGTTCAT CCCTTCCTTT ACTTTGAGAA CAATCTGATT GGATCAATAA 60 CTTTGTATTC AGTCATGGCC AAGTATAATT GTAAGAAGGT ACGTCTTTCG ATATAATTTT 65375 |||||||||| |||||||||| |||||||||| |||||||| CTTTGTATTC AGTCATGGCC AAGTATAATT GTAAGAAG.. .......... .......... 98 GGTTTCATAT AAGTGAAATA TGCTATGCAT TCAGGGCAAG TTGGAATCTG TTATGTTCAT 65435 .......... .......... .......... .......... .......... .......... 98 GATTGCTGCT ACCCTTATAG TTTTGGTAGA ATTTGAAGGC TAATAGTAAA CATGGTTCTT 65495 .......... .......... .......... .......... .......... .......... 98 CTTTCAAGAA CTCATTTAGC CTCAAGAACA TGGGCGTTGC TAGGGGGCGG AAGGAGGTTC 65555 .......... .......... .......... .......... .......... .......... 98 AGTTGTTCAT GGTGTGGCGA ACTGTTGGAT TCGTAGGAGG GTATTGAGTA GGTTGGTCAG 65615 .......... .......... .......... .......... .......... .......... 98 GTTGATAACT TTTTAATTTC ATTGTGTGAA ATTGCAGTTG GTTTTTTCAT CATCTGCAAC 65675 ||| |||||||||| |||||||||| .......... .......... .......... .......TTG GTTTTTTCAT CATCTGCAAC 121 AGTTTATGGT CAGCCTGAAA AGGTTCCCTG TGTGGAGGAT TTTGAATTGA AGGCTATGAA 65735 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTTATGGT CAGCCTGAAA AGGTTCCCTG TGTGGAGGAT TTTGAATTGA AGGCTATGAA 181 TCCTTATGGT CGAACAAAGG TTTGTATTGT CAATAATTGT CTCTTAATTT CATACTGATT 65795 |||||||||| ||||||||| TCCTTATGGT CGAACAAAG. .......... .......... .......... .......... 200 AGAGATAGTT CATTTGATAG TATCTCAGTC TGTAAACTAT GTGACCGAAC CTGTGTTTTG 65855 .......... .......... .......... .......... .......... .......... 200 TTCTATTTAA TTAGCTATTT CTTGAAGATA TTGCACGGGA TATCCAGAAG GCTGATCAAG 65915 |||||| |||||||||| |||||||||| |||||||||| |||||||||| .......... ....CTATTT CTTGAAGATA TTGCACGGGA TATCCAGAAG GCTGATCAAG 246 AATGGAATAT CATACTGTTG AGGTATTTCA ACCCGGTAGG AGCTCATGAA AGTGGCAAAC 65975 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGGAATAT CATACTGTTG AGGTATTTCA ACCCGGTAGG AGCTCATGAA AGTGGCAAAC 306 TCGGGGAAGA TCCAAAGGGC ATTCCGAACA ATCTTATGCC TTACATTCAG CAAGTAGCTG 66035 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGGGGAAGA TCCAAAGGGC ATTCCGAACA ATCTTATGCC TTACATTCAG CAAGTAGCTG 366 TTGGTAGATT GCCGGAGTTG AATGTATATG GCAACGACTA CCCTACACCT GATGGTACCG 66095 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGTAGATT GCCGGAGTTG AATGTATATG GCAACGACTA CCCTACACCT GATGGTACCG 426 CGGTAGGTTA TGTTTGGCTG ATTCTTTGTG ACTGTAGCTT CTTTGTATGA GGAAAAAAAA 66155 || CG........ .......... .......... .......... .......... .......... 428 GAAACTGAAT GACTCAACAT ACCATCTGTG ACTAGAGTAC ATACGAAAGA AACAGAAAAT 66215 .......... .......... .......... .......... .......... .......... 428 GAAGAGCGAG CAGAAGTTAA CAGCCGGAAC AACTTATTGA ACTACTAATA ATGAAGAGAA 66275 .......... .......... .......... .......... .......... .......... 428 AAGACAGAAA TATAGTTGAA TATCCAAATA TACTCATGAC ATGAATCACC TTTAACATAT 66335 .......... .......... .......... .......... .......... .......... 428 TTTGCTTCTT GTACTTGACT GTTAAATGAT CTTTAATCTA TTTCTCACTA GATACGAGAT 66395 ||||||||| .......... .......... .......... .......... .......... .ATACGAGAT 437 TATATCCATG TTATGGATTT GGCGGACGGT CATGTTGTTG CACTTCAGAG ACTTCTAAGG 66455 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATATCCATG TTATGGATTT GGCGGACGGT CATGTTGTTG CACTTCAGAG ACTTCTAAGG 497 CAGAATCACA TAGGTAAGTA ATCCTTTTCA AAGCAAAGTT TAGATCTGAA TTCTTTTGAC 66515 |||||||||| ||| CAGAATCACA TAG....... .......... .......... .......... .......... 510 GTTAGTTCGA GCTAATGATA CCCTTTTGTA TGATTTTGAC ATTTCATATA TTTCGGTTGA 66575 .......... .......... .......... .......... .......... .......... 510 AGGTAACATC TTGTGACATT TGTTCTTCTG TTTAATGGTT TGCATTAGGT TGTGTTGCCT 66635 || |||||||||| .......... .......... .......... .......... ........GT TGTGTTGCCT 522 ACAATTTGGG TACTGGAAAA GGCAAATCTG TCCTAGAGAT GGTTGGTGCC TTTGAAAAGG 66695 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAATTTGGG TACTGGAAAA GGCAAATCTG TCCTAGAGAT GGTTGGTGCC TTTGAAAAGG 582 CGTCTGGAAA GGTCTCTTAA CGGAACACGC TAAACCATAC TTAGTAGAAT TTGAACAAAG 66755 |||||||||| | CGTCTGGAAA G......... .......... .......... .......... .......... 593 CAACAATCTC ATATTATGTT GTACTAATAT ATTATTTTTG TTCCAGAAAA TCCCGCTTAA 66815 |||| |||||||||| .......... .......... .......... .......... ......AAAA TCCCGCTTAA 607 AATG 66819 |||| AATG 611 hqPGS_C08HBa0235H18.1+_SGN-E297537+ (65256 65353,65653 65754,65870 66097,66387 66468,66624 66706,66802 66819) ******************************************************************************** EST sequence 41 +strand 720 n (File: SGN-E211078+) 1 TCAGCCCTTC CTTTACTTTG AGAACAATCT GATTGGATCA ATAACTTTGT ATTCAGTCAT 61 GGCCAAGTAT AATTGTAAGA AGTTGGTTTT TTCATCATCT GCAACAGTTT ATGGTCAGCC 121 TGAAAAGGTT CCCTGTGTGG AGGATTTTGA ATTGAAGGCT ATGAATCCTT ATGGTCGAAC 181 AAAGCTATTT CTTGAAGATA TTGCACGGGA TATCCAGAAG GCTGATCAAG AATGGAATAT 241 CATACTGTTG AGGTATTTCA ACCCGGTAGG AGCTCATGAA AGTGGCAAAC TCGGGGAAGA 301 TCCAAAGGGC ATTCCGAACA ATCTTATGCC TTACATTCAG CAAGTAGCTG TTGGTAGATT 361 GCCGGAGTTG AATGTATATG GCAACGACTA CCCTACACCT GATGGTACCG CGATACGAGA 421 TTATATCCAT GTTATGGATT TGGCGGACGG TCATGTTGTT GCACTTCAGA GACTTCTAAG 481 GCAGAATCAC ATAGGTTGTG TTGCCTACAA TTTGGGTACT GGAAAAGGCA AATCTGTCCT 541 ACAGATGGTT GGTGCCTTTG AAAAGGCGTC TGGAGAGAAA ATCCCGCTTA AAATGTGTCC 601 AAGAAGACCA GGAGATGCCA CTGCTGTTTA CGCATCTACT GAAAAAGCTG AGAAGGAGCT 661 CGGTTGGAAG GCAAATATGG GATAAATGAG ATGTGCAGGT ACCATTGGGA ATGGGCAAGC Predicted gene structure (within gDNA segment 64672 to 68004): Exon 1 65272 65353 ( 82 n); cDNA 1 82 ( 82 n); score: 1.000 Intron 1 65354 65652 ( 299 n); Pd: 0.969 (s: 1.00), Pa: 0.983 (s: 1.00) Exon 2 65653 65754 ( 102 n); cDNA 83 184 ( 102 n); score: 1.000 Intron 2 65755 65869 ( 115 n); Pd: 0.999 (s: 1.00), Pa: 0.993 (s: 1.00) Exon 3 65870 66097 ( 228 n); cDNA 185 412 ( 228 n); score: 1.000 Intron 3 66098 66386 ( 289 n); Pd: 0.982 (s: 1.00), Pa: 0.970 (s: 1.00) Exon 4 66387 66468 ( 82 n); cDNA 413 494 ( 82 n); score: 1.000 Intron 4 66469 66623 ( 155 n); Pd: 0.998 (s: 1.00), Pa: 0.979 (s: 0.98) Exon 5 66624 66706 ( 83 n); cDNA 495 577 ( 83 n); score: 0.976 Intron 5 66707 66801 ( 95 n); Pd: 0.000 (s: 0.96), Pa: 0.997 (s: 1.00) Exon 6 66802 66893 ( 92 n); cDNA 578 669 ( 92 n); score: 1.000 Intron 6 66894 67043 ( 150 n); Pd: 0.997 (s: 1.00), Pa: 0.990 (s: 0.92) Exon 7 67044 67095 ( 52 n); cDNA 670 720 ( 51 n); score: 0.923 MATCH C08HBa0235H18.1+ SGN-E211078+ 0.992 721 1.001 C PGS_C08HBa0235H18.1+_SGN-E211078+ (65272 65353,65653 65754,65870 66097,66387 66468,66624 66706,66802 66893,67044 67095) Alignment (genomic DNA sequence = upper lines): TCAGCCCTTC CTTTACTTTG AGAACAATCT GATTGGATCA ATAACTTTGT ATTCAGTCAT 65331 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAGCCCTTC CTTTACTTTG AGAACAATCT GATTGGATCA ATAACTTTGT ATTCAGTCAT 60 GGCCAAGTAT AATTGTAAGA AGGTACGTCT TTCGATATAA TTTTGGTTTC ATATAAGTGA 65391 |||||||||| |||||||||| || GGCCAAGTAT AATTGTAAGA AG........ .......... .......... .......... 82 AATATGCTAT GCATTCAGGG CAAGTTGGAA TCTGTTATGT TCATGATTGC TGCTACCCTT 65451 .......... .......... .......... .......... .......... .......... 82 ATAGTTTTGG TAGAATTTGA AGGCTAATAG TAAACATGGT TCTTCTTTCA AGAACTCATT 65511 .......... .......... .......... .......... .......... .......... 82 TAGCCTCAAG AACATGGGCG TTGCTAGGGG GCGGAAGGAG GTTCAGTTGT TCATGGTGTG 65571 .......... .......... .......... .......... .......... .......... 82 GCGAACTGTT GGATTCGTAG GAGGGTATTG AGTAGGTTGG TCAGGTTGAT AACTTTTTAA 65631 .......... .......... .......... .......... .......... .......... 82 TTTCATTGTG TGAAATTGCA GTTGGTTTTT TCATCATCTG CAACAGTTTA TGGTCAGCCT 65691 ||||||||| |||||||||| |||||||||| |||||||||| .......... .......... .TTGGTTTTT TCATCATCTG CAACAGTTTA TGGTCAGCCT 121 GAAAAGGTTC CCTGTGTGGA GGATTTTGAA TTGAAGGCTA TGAATCCTTA TGGTCGAACA 65751 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAAAGGTTC CCTGTGTGGA GGATTTTGAA TTGAAGGCTA TGAATCCTTA TGGTCGAACA 181 AAGGTTTGTA TTGTCAATAA TTGTCTCTTA ATTTCATACT GATTAGAGAT AGTTCATTTG 65811 ||| AAG....... .......... .......... .......... .......... .......... 184 ATAGTATCTC AGTCTGTAAA CTATGTGACC GAACCTGTGT TTTGTTCTAT TTAATTAGCT 65871 || .......... .......... .......... .......... .......... ........CT 186 ATTTCTTGAA GATATTGCAC GGGATATCCA GAAGGCTGAT CAAGAATGGA ATATCATACT 65931 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTCTTGAA GATATTGCAC GGGATATCCA GAAGGCTGAT CAAGAATGGA ATATCATACT 246 GTTGAGGTAT TTCAACCCGG TAGGAGCTCA TGAAAGTGGC AAACTCGGGG AAGATCCAAA 65991 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGAGGTAT TTCAACCCGG TAGGAGCTCA TGAAAGTGGC AAACTCGGGG AAGATCCAAA 306 GGGCATTCCG AACAATCTTA TGCCTTACAT TCAGCAAGTA GCTGTTGGTA GATTGCCGGA 66051 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGCATTCCG AACAATCTTA TGCCTTACAT TCAGCAAGTA GCTGTTGGTA GATTGCCGGA 366 GTTGAATGTA TATGGCAACG ACTACCCTAC ACCTGATGGT ACCGCGGTAG GTTATGTTTG 66111 |||||||||| |||||||||| |||||||||| |||||||||| |||||| GTTGAATGTA TATGGCAACG ACTACCCTAC ACCTGATGGT ACCGCG.... .......... 412 GCTGATTCTT TGTGACTGTA GCTTCTTTGT ATGAGGAAAA AAAAGAAACT GAATGACTCA 66171 .......... .......... .......... .......... .......... .......... 412 ACATACCATC TGTGACTAGA GTACATACGA AAGAAACAGA AAATGAAGAG CGAGCAGAAG 66231 .......... .......... .......... .......... .......... .......... 412 TTAACAGCCG GAACAACTTA TTGAACTACT AATAATGAAG AGAAAAGACA GAAATATAGT 66291 .......... .......... .......... .......... .......... .......... 412 TGAATATCCA AATATACTCA TGACATGAAT CACCTTTAAC ATATTTTGCT TCTTGTACTT 66351 .......... .......... .......... .......... .......... .......... 412 GACTGTTAAA TGATCTTTAA TCTATTTCTC ACTAGATACG AGATTATATC CATGTTATGG 66411 ||||| |||||||||| |||||||||| .......... .......... .......... .....ATACG AGATTATATC CATGTTATGG 437 ATTTGGCGGA CGGTCATGTT GTTGCACTTC AGAGACTTCT AAGGCAGAAT CACATAGGTA 66471 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| ATTTGGCGGA CGGTCATGTT GTTGCACTTC AGAGACTTCT AAGGCAGAAT CACATAG... 494 AGTAATCCTT TTCAAAGCAA AGTTTAGATC TGAATTCTTT TGACGTTAGT TCGAGCTAAT 66531 .......... .......... .......... .......... .......... .......... 494 GATACCCTTT TGTATGATTT TGACATTTCA TATATTTCGG TTGAAGGTAA CATCTTGTGA 66591 .......... .......... .......... .......... .......... .......... 494 CATTTGTTCT TCTGTTTAAT GGTTTGCATT AGGTTGTGTT GCCTACAATT TGGGTACTGG 66651 |||||||| |||||||||| |||||||||| .......... .......... .......... ..GTTGTGTT GCCTACAATT TGGGTACTGG 522 AAAAGGCAAA TCTGTCCTAG AGATGGTTGG TGCCTTTGAA AAGGCGTCTG GAAAGGTCTC 66711 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| || || AAAAGGCAAA TCTGTCCTAC AGATGGTTGG TGCCTTTGAA AAGGCGTCTG GAGAG..... 577 TTAACGGAAC ACGCTAAACC ATACTTAGTA GAATTTGAAC AAAGCAACAA TCTCATATTA 66771 .......... .......... .......... .......... .......... .......... 577 TGTTGTACTA ATATATTATT TTTGTTCCAG AAAATCCCGC TTAAAATGTG TCCAAGAAGA 66831 |||||||||| |||||||||| |||||||||| .......... .......... .......... AAAATCCCGC TTAAAATGTG TCCAAGAAGA 607 CCAGGAGATG CCACTGCTGT TTACGCATCT ACTGAAAAAG CTGAGAAGGA GCTCGGTTGG 66891 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAGGAGATG CCACTGCTGT TTACGCATCT ACTGAAAAAG CTGAGAAGGA GCTCGGTTGG 667 AAGTAAGTAG TAAATGGTTA TTTTTCTATT CTTGGATCAA CTGATGCTTG TGCCTAGCAG 66951 || AA........ .......... .......... .......... .......... .......... 669 CCTCATAAAG GCTAATCTTC TTGCATCTCA TTCATTTCAC CAGTTGAAAG AGAAACTGAT 67011 .......... .......... .......... .......... .......... .......... 669 GGTGGGATCA AATCTTTTCT ACTTCTTTTC AGGGCAAAAT ATGGGATAAA TGAGATGTGC 67071 ||| |||| |||||||||| |||||||||| .......... .......... .......... ..GGC-AAAT ATGGGATAAA TGAGATGTGC 696 AGGGACCAGT GGAAATGGGC AAGC 67095 ||| |||| | || ||||||| |||| AGGTACCATT GGGAATGGGC AAGC 720 hqPGS_C08HBa0235H18.1+_SGN-E211078+ (65272 65353,65653 65754,65870 66097,66387 66468,66624 66706,66802 66893,67044 67095) ******************************************************************************** EST sequence 375 +strand 712 n (File: SGN-E369438+) 1 AAAGGTTCCC TGTGTGGAGG ATTTTGAATT GAAGGCTATG AATCCTTATG GTCGAACAAA 61 GCTATTTCTT GAAGATATTG CACGGGATAT CCAGAAGGCT GATCAAGAAT GGAATATCAT 121 ACTGTTGAGG TATTTCAACC CGGTAGGAGC TCATGAAAGT GGCAAACTCG GGGAAGATCC 181 AAAGGGCATT CCGAACAATC TTATGCCTTA CATTCAGCAA GTAGCTGTTG GTAGATTGCC 241 GGAGTTGAAT GTATATGGCA ACGACTACCC TACACCTGAT GGTACCGCGA TACGAGATTA 301 TATCCATGTT ATGGATTTGG CGGACGGTCA TGTTGTTGCA CTTCAGAGAC TTCTAAGGCA 361 GAATCACATA GGTTGTGTTG CCTACAATTT GGGTACTGGA AAAGGCAAAT CTGTCCTAGA 421 GATGGTTGGT GCCTTTGAAA AGGCGTCTGG AAAGAAAATC CCGCTTAAAA TGTGTCCAAG 481 AAGACCAGGA GATGCCACTG CTGTTTACGC ATCTACTGAA AAAGCTGAGA AGGAGCTCGG 541 TTGGAAGGCA AAATATGGGA TAAATGAGAT GTGCAGGGAC CAGTGGAAAT GGGCAAGCCA 601 AAATCCTTGG GGTTACCAAC CAAAGCCTTG ATATGTTATA ATAATAATAA TAATAATACA 661 AGTAGCACTT GGAGTACAAA ACTGTAGTCA ACATCCTAGT ACTTTACATT TC Predicted gene structure (within gDNA segment 65094 to 67819): Exon 1 65694 65754 ( 61 n); cDNA 1 61 ( 61 n); score: 1.000 Intron 1 65755 65869 ( 115 n); Pd: 0.999 (s: 1.00), Pa: 0.993 (s: 1.00) Exon 2 65870 66097 ( 228 n); cDNA 62 289 ( 228 n); score: 1.000 Intron 2 66098 66386 ( 289 n); Pd: 0.982 (s: 1.00), Pa: 0.970 (s: 1.00) Exon 3 66387 66468 ( 82 n); cDNA 290 371 ( 82 n); score: 1.000 Intron 3 66469 66623 ( 155 n); Pd: 0.998 (s: 1.00), Pa: 0.979 (s: 1.00) Exon 4 66624 66706 ( 83 n); cDNA 372 454 ( 83 n); score: 1.000 Intron 4 66707 66801 ( 95 n); Pd: 0.000 (s: 1.00), Pa: 0.997 (s: 1.00) Exon 5 66802 66893 ( 92 n); cDNA 455 546 ( 92 n); score: 1.000 Intron 5 66894 67043 ( 150 n); Pd: 0.997 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 6 67044 67209 ( 166 n); cDNA 547 712 ( 166 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E369438+ 1.000 712 1.000 C PGS_C08HBa0235H18.1+_SGN-E369438+ (65694 65754,65870 66097,66387 66468,66624 66706,66802 66893,67044 67209) Alignment (genomic DNA sequence = upper lines): AAAGGTTCCC TGTGTGGAGG ATTTTGAATT GAAGGCTATG AATCCTTATG GTCGAACAAA 65753 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGGTTCCC TGTGTGGAGG ATTTTGAATT GAAGGCTATG AATCCTTATG GTCGAACAAA 60 GGTTTGTATT GTCAATAATT GTCTCTTAAT TTCATACTGA TTAGAGATAG TTCATTTGAT 65813 | G......... .......... .......... .......... .......... .......... 61 AGTATCTCAG TCTGTAAACT ATGTGACCGA ACCTGTGTTT TGTTCTATTT AATTAGCTAT 65873 |||| .......... .......... .......... .......... .......... ......CTAT 65 TTCTTGAAGA TATTGCACGG GATATCCAGA AGGCTGATCA AGAATGGAAT ATCATACTGT 65933 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTGAAGA TATTGCACGG GATATCCAGA AGGCTGATCA AGAATGGAAT ATCATACTGT 125 TGAGGTATTT CAACCCGGTA GGAGCTCATG AAAGTGGCAA ACTCGGGGAA GATCCAAAGG 65993 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAGGTATTT CAACCCGGTA GGAGCTCATG AAAGTGGCAA ACTCGGGGAA GATCCAAAGG 185 GCATTCCGAA CAATCTTATG CCTTACATTC AGCAAGTAGC TGTTGGTAGA TTGCCGGAGT 66053 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCATTCCGAA CAATCTTATG CCTTACATTC AGCAAGTAGC TGTTGGTAGA TTGCCGGAGT 245 TGAATGTATA TGGCAACGAC TACCCTACAC CTGATGGTAC CGCGGTAGGT TATGTTTGGC 66113 |||||||||| |||||||||| |||||||||| |||||||||| |||| TGAATGTATA TGGCAACGAC TACCCTACAC CTGATGGTAC CGCG...... .......... 289 TGATTCTTTG TGACTGTAGC TTCTTTGTAT GAGGAAAAAA AAGAAACTGA ATGACTCAAC 66173 .......... .......... .......... .......... .......... .......... 289 ATACCATCTG TGACTAGAGT ACATACGAAA GAAACAGAAA ATGAAGAGCG AGCAGAAGTT 66233 .......... .......... .......... .......... .......... .......... 289 AACAGCCGGA ACAACTTATT GAACTACTAA TAATGAAGAG AAAAGACAGA AATATAGTTG 66293 .......... .......... .......... .......... .......... .......... 289 AATATCCAAA TATACTCATG ACATGAATCA CCTTTAACAT ATTTTGCTTC TTGTACTTGA 66353 .......... .......... .......... .......... .......... .......... 289 CTGTTAAATG ATCTTTAATC TATTTCTCAC TAGATACGAG ATTATATCCA TGTTATGGAT 66413 ||||||| |||||||||| |||||||||| .......... .......... .......... ...ATACGAG ATTATATCCA TGTTATGGAT 316 TTGGCGGACG GTCATGTTGT TGCACTTCAG AGACTTCTAA GGCAGAATCA CATAGGTAAG 66473 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| TTGGCGGACG GTCATGTTGT TGCACTTCAG AGACTTCTAA GGCAGAATCA CATAG..... 371 TAATCCTTTT CAAAGCAAAG TTTAGATCTG AATTCTTTTG ACGTTAGTTC GAGCTAATGA 66533 .......... .......... .......... .......... .......... .......... 371 TACCCTTTTG TATGATTTTG ACATTTCATA TATTTCGGTT GAAGGTAACA TCTTGTGACA 66593 .......... .......... .......... .......... .......... .......... 371 TTTGTTCTTC TGTTTAATGG TTTGCATTAG GTTGTGTTGC CTACAATTTG GGTACTGGAA 66653 |||||||||| |||||||||| |||||||||| .......... .......... .......... GTTGTGTTGC CTACAATTTG GGTACTGGAA 401 AAGGCAAATC TGTCCTAGAG ATGGTTGGTG CCTTTGAAAA GGCGTCTGGA AAGGTCTCTT 66713 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| AAGGCAAATC TGTCCTAGAG ATGGTTGGTG CCTTTGAAAA GGCGTCTGGA AAG....... 454 AACGGAACAC GCTAAACCAT ACTTAGTAGA ATTTGAACAA AGCAACAATC TCATATTATG 66773 .......... .......... .......... .......... .......... .......... 454 TTGTACTAAT ATATTATTTT TGTTCCAGAA AATCCCGCTT AAAATGTGTC CAAGAAGACC 66833 || |||||||||| |||||||||| |||||||||| .......... .......... ........AA AATCCCGCTT AAAATGTGTC CAAGAAGACC 486 AGGAGATGCC ACTGCTGTTT ACGCATCTAC TGAAAAAGCT GAGAAGGAGC TCGGTTGGAA 66893 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGAGATGCC ACTGCTGTTT ACGCATCTAC TGAAAAAGCT GAGAAGGAGC TCGGTTGGAA 546 GTAAGTAGTA AATGGTTATT TTTCTATTCT TGGATCAACT GATGCTTGTG CCTAGCAGCC 66953 .......... .......... .......... .......... .......... .......... 546 TCATAAAGGC TAATCTTCTT GCATCTCATT CATTTCACCA GTTGAAAGAG AAACTGATGG 67013 .......... .......... .......... .......... .......... .......... 546 TGGGATCAAA TCTTTTCTAC TTCTTTTCAG GGCAAAATAT GGGATAAATG AGATGTGCAG 67073 |||||||||| |||||||||| |||||||||| .......... .......... .......... GGCAAAATAT GGGATAAATG AGATGTGCAG 576 GGACCAGTGG AAATGGGCAA GCCAAAATCC TTGGGGTTAC CAACCAAAGC CTTGATATGT 67133 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGACCAGTGG AAATGGGCAA GCCAAAATCC TTGGGGTTAC CAACCAAAGC CTTGATATGT 636 TATAATAATA ATAATAATAA TACAAGTAGC ACTTGGAGTA CAAAACTGTA GTCAACATCC 67193 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATAATAATA ATAATAATAA TACAAGTAGC ACTTGGAGTA CAAAACTGTA GTCAACATCC 696 TAGTACTTTA CATTTC 67209 |||||||||| |||||| TAGTACTTTA CATTTC 712 hqPGS_C08HBa0235H18.1+_SGN-E369438+ (65694 65754,65870 66097,66387 66468,66624 66706,66802 66893,67044 67209) ******************************************************************************** EST sequence 318 +strand 399 n (File: SGN-E246876+) 1 AGGTTCCCTG TGTGGAGGAT TTTGAATTGA AGGCTATGAA TCCTTATGGT CGAACAAAGC 61 TATTTCTTGA AGATATTGCA CGGGATATCC AGAAGGCTGA TCAAGAATGG AATATCATAC 121 TGTTGAGGTA TTTCAACCCG GTAGGAGCTC ATGAAAGTGG CAAACTCGGG GAAGAATCCA 181 AAGGGCATTC CGAACAATCT TATGCCTTAC ATTCAGCAAG TAGCTGTTGG TAGATTGCCG 241 GAGTTGAATG TATATGGCAA CGACTACCCT ACACCTGATG GTACCGCGAT ACGAGATTAT 301 ATCCATGTTA TGGATTTGGC GGACGGTCAT GTTGTTGCAC TTCAGAGACT TCTAAGGCAG 361 AATCACATAA GTTGTGTTGC CTACAATTTG GGTACTGGA Predicted gene structure (within gDNA segment 65096 to 67377): Exon 1 65696 65754 ( 59 n); cDNA 1 59 ( 59 n); score: 1.000 Intron 1 65755 65869 ( 115 n); Pd: 0.999 (s: 1.00), Pa: 0.993 (s: 1.00) Exon 2 65870 66097 ( 228 n); cDNA 60 288 ( 229 n); score: 0.989 Intron 2 66098 66386 ( 289 n); Pd: 0.982 (s: 1.00), Pa: 0.970 (s: 1.00) Exon 3 66387 66468 ( 82 n); cDNA 289 370 ( 82 n); score: 0.988 Intron 3 66469 66623 ( 155 n); Pd: 0.998 (s: 0.98), Pa: 0.979 (s: 0) Exon 4 66624 66652 ( 29 n); cDNA 371 399 ( 29 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E246876+ 0.991 398 0.997 C PGS_C08HBa0235H18.1+_SGN-E246876+ (65696 65754,65870 66097,66387 66468,66624 66652) Alignment (genomic DNA sequence = upper lines): AGGTTCCCTG TGTGGAGGAT TTTGAATTGA AGGCTATGAA TCCTTATGGT CGAACAAAGG 65755 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| AGGTTCCCTG TGTGGAGGAT TTTGAATTGA AGGCTATGAA TCCTTATGGT CGAACAAAG. 59 TTTGTATTGT CAATAATTGT CTCTTAATTT CATACTGATT AGAGATAGTT CATTTGATAG 65815 .......... .......... .......... .......... .......... .......... 59 TATCTCAGTC TGTAAACTAT GTGACCGAAC CTGTGTTTTG TTCTATTTAA TTAGCTATTT 65875 |||||| .......... .......... .......... .......... .......... ....CTATTT 65 CTTGAAGATA TTGCACGGGA TATCCAGAAG GCTGATCAAG AATGGAATAT CATACTGTTG 65935 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGAAGATA TTGCACGGGA TATCCAGAAG GCTGATCAAG AATGGAATAT CATACTGTTG 125 AGGTATTTCA ACCCGGTAGG AGCTCATGAA AGTGGCAAAC TCGGGGAAG- ATCCAAAGGG 65994 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| AGGTATTTCA ACCCGGTAGG AGCTCATGAA AGTGGCAAAC TCGGGGAAGA ATCCAAAGGG 185 CATTCCGAAC AATCTTATGC CTTACATTCA GCAAGTAGCT GTTGGTAGAT TGCCGGAGTT 66054 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTCCGAAC AATCTTATGC CTTACATTCA GCAAGTAGCT GTTGGTAGAT TGCCGGAGTT 245 GAATGTATAT GGCAACGACT ACCCTACACC TGATGGTACC GCGGTAGGTT ATGTTTGGCT 66114 |||||||||| |||||||||| |||||||||| |||||||||| ||| GAATGTATAT GGCAACGACT ACCCTACACC TGATGGTACC GCG....... .......... 288 GATTCTTTGT GACTGTAGCT TCTTTGTATG AGGAAAAAAA AGAAACTGAA TGACTCAACA 66174 .......... .......... .......... .......... .......... .......... 288 TACCATCTGT GACTAGAGTA CATACGAAAG AAACAGAAAA TGAAGAGCGA GCAGAAGTTA 66234 .......... .......... .......... .......... .......... .......... 288 ACAGCCGGAA CAACTTATTG AACTACTAAT AATGAAGAGA AAAGACAGAA ATATAGTTGA 66294 .......... .......... .......... .......... .......... .......... 288 ATATCCAAAT ATACTCATGA CATGAATCAC CTTTAACATA TTTTGCTTCT TGTACTTGAC 66354 .......... .......... .......... .......... .......... .......... 288 TGTTAAATGA TCTTTAATCT ATTTCTCACT AGATACGAGA TTATATCCAT GTTATGGATT 66414 |||||||| |||||||||| |||||||||| .......... .......... .......... ..ATACGAGA TTATATCCAT GTTATGGATT 316 TGGCGGACGG TCATGTTGTT GCACTTCAGA GACTTCTAAG GCAGAATCAC ATAGGTAAGT 66474 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| TGGCGGACGG TCATGTTGTT GCACTTCAGA GACTTCTAAG GCAGAATCAC ATAA...... 370 AATCCTTTTC AAAGCAAAGT TTAGATCTGA ATTCTTTTGA CGTTAGTTCG AGCTAATGAT 66534 .......... .......... .......... .......... .......... .......... 370 ACCCTTTTGT ATGATTTTGA CATTTCATAT ATTTCGGTTG AAGGTAACAT CTTGTGACAT 66594 .......... .......... .......... .......... .......... .......... 370 TTGTTCTTCT GTTTAATGGT TTGCATTAGG TTGTGTTGCC TACAATTTGG GTACTGGA 66652 | |||||||||| |||||||||| |||||||| .......... .......... .........G TTGTGTTGCC TACAATTTGG GTACTGGA 399 hqPGS_C08HBa0235H18.1+_SGN-E246876+ (65696 65754,65870 66097,66387 66468,66624 66652) ******************************************************************************** EST sequence 87 +strand 624 n (File: SGN-E305446+) 1 CAGAAGGCTG ATCAAGAATG GAATATCATA CTGTTGAGGT ATTTCAACCC GGTAGGAGCT 61 CATGAAAGTG GCAAACTCGG GGAAGATCCA AAGGGCATTC CGAACAATCT TATGCCTTAC 121 ATTCAGCAAG TAGCTGTTGG TAGATTGCCG GAGTTGAATG TATATGGCAA CGACTACCCT 181 ACACCTGATG GTACCGCGAT ACGAGATTAT ATCCATGTTA TGGATTTGGC GGACGGTCAT 241 GTTGTTGCAC TTCAGAGACT TCTAAGGCAG AATCACATAG GTTGTGTTGC CTACAATTTG 301 GGTACTGGAA AAGGCAAATC TGTCCTAGAG ATGGTTGGTG CCTTTGAAAA GGCGTCTGGA 361 AAGAAAATCC CGCTTAAAAT GTGTCCAAGA AGACCAGGAG ATGCCACTGC TGTTTACGCA 421 TCTACTGAAA AAGCTGAGAA GGAGCTCGGT TGGAAGGCAA AATATGGGAT AAATGAGATG 481 TGCAGGGACC AGTGGAAATG GGCAAGCCAA AATCCTTGGG GTTACCAACC AAAGCCTTGA 541 TATGTTATAA TAATAATAAT AATAATACAA GTAGCACTTG GAGTACAAAA CTGTAGTCAA 601 CATCCTAGTA CTTTACATTT CATG Predicted gene structure (within gDNA segment 65300 to 67822): Exon 1 65900 66097 ( 198 n); cDNA 1 198 ( 198 n); score: 1.000 Intron 1 66098 66386 ( 289 n); Pd: 0.982 (s: 1.00), Pa: 0.970 (s: 1.00) Exon 2 66387 66468 ( 82 n); cDNA 199 280 ( 82 n); score: 1.000 Intron 2 66469 66623 ( 155 n); Pd: 0.998 (s: 1.00), Pa: 0.979 (s: 1.00) Exon 3 66624 66706 ( 83 n); cDNA 281 363 ( 83 n); score: 1.000 Intron 3 66707 66801 ( 95 n); Pd: 0.000 (s: 1.00), Pa: 0.997 (s: 1.00) Exon 4 66802 66893 ( 92 n); cDNA 364 455 ( 92 n); score: 1.000 Intron 4 66894 67043 ( 150 n); Pd: 0.997 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 5 67044 67211 ( 168 n); cDNA 456 623 ( 168 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E305446+ 1.000 623 0.998 C PGS_C08HBa0235H18.1+_SGN-E305446+ (65900 66097,66387 66468,66624 66706,66802 66893,67044 67211) Alignment (genomic DNA sequence = upper lines): CAGAAGGCTG ATCAAGAATG GAATATCATA CTGTTGAGGT ATTTCAACCC GGTAGGAGCT 65959 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGAAGGCTG ATCAAGAATG GAATATCATA CTGTTGAGGT ATTTCAACCC GGTAGGAGCT 60 CATGAAAGTG GCAAACTCGG GGAAGATCCA AAGGGCATTC CGAACAATCT TATGCCTTAC 66019 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGAAAGTG GCAAACTCGG GGAAGATCCA AAGGGCATTC CGAACAATCT TATGCCTTAC 120 ATTCAGCAAG TAGCTGTTGG TAGATTGCCG GAGTTGAATG TATATGGCAA CGACTACCCT 66079 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTCAGCAAG TAGCTGTTGG TAGATTGCCG GAGTTGAATG TATATGGCAA CGACTACCCT 180 ACACCTGATG GTACCGCGGT AGGTTATGTT TGGCTGATTC TTTGTGACTG TAGCTTCTTT 66139 |||||||||| |||||||| ACACCTGATG GTACCGCG.. .......... .......... .......... .......... 198 GTATGAGGAA AAAAAAGAAA CTGAATGACT CAACATACCA TCTGTGACTA GAGTACATAC 66199 .......... .......... .......... .......... .......... .......... 198 GAAAGAAACA GAAAATGAAG AGCGAGCAGA AGTTAACAGC CGGAACAACT TATTGAACTA 66259 .......... .......... .......... .......... .......... .......... 198 CTAATAATGA AGAGAAAAGA CAGAAATATA GTTGAATATC CAAATATACT CATGACATGA 66319 .......... .......... .......... .......... .......... .......... 198 ATCACCTTTA ACATATTTTG CTTCTTGTAC TTGACTGTTA AATGATCTTT AATCTATTTC 66379 .......... .......... .......... .......... .......... .......... 198 TCACTAGATA CGAGATTATA TCCATGTTAT GGATTTGGCG GACGGTCATG TTGTTGCACT 66439 ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| .......ATA CGAGATTATA TCCATGTTAT GGATTTGGCG GACGGTCATG TTGTTGCACT 251 TCAGAGACTT CTAAGGCAGA ATCACATAGG TAAGTAATCC TTTTCAAAGC AAAGTTTAGA 66499 |||||||||| |||||||||| ||||||||| TCAGAGACTT CTAAGGCAGA ATCACATAG. .......... .......... .......... 280 TCTGAATTCT TTTGACGTTA GTTCGAGCTA ATGATACCCT TTTGTATGAT TTTGACATTT 66559 .......... .......... .......... .......... .......... .......... 280 CATATATTTC GGTTGAAGGT AACATCTTGT GACATTTGTT CTTCTGTTTA ATGGTTTGCA 66619 .......... .......... .......... .......... .......... .......... 280 TTAGGTTGTG TTGCCTACAA TTTGGGTACT GGAAAAGGCA AATCTGTCCT AGAGATGGTT 66679 |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ....GTTGTG TTGCCTACAA TTTGGGTACT GGAAAAGGCA AATCTGTCCT AGAGATGGTT 336 GGTGCCTTTG AAAAGGCGTC TGGAAAGGTC TCTTAACGGA ACACGCTAAA CCATACTTAG 66739 |||||||||| |||||||||| ||||||| GGTGCCTTTG AAAAGGCGTC TGGAAAG... .......... .......... .......... 363 TAGAATTTGA ACAAAGCAAC AATCTCATAT TATGTTGTAC TAATATATTA TTTTTGTTCC 66799 .......... .......... .......... .......... .......... .......... 363 AGAAAATCCC GCTTAAAATG TGTCCAAGAA GACCAGGAGA TGCCACTGCT GTTTACGCAT 66859 |||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ..AAAATCCC GCTTAAAATG TGTCCAAGAA GACCAGGAGA TGCCACTGCT GTTTACGCAT 421 CTACTGAAAA AGCTGAGAAG GAGCTCGGTT GGAAGTAAGT AGTAAATGGT TATTTTTCTA 66919 |||||||||| |||||||||| |||||||||| |||| CTACTGAAAA AGCTGAGAAG GAGCTCGGTT GGAA...... .......... .......... 455 TTCTTGGATC AACTGATGCT TGTGCCTAGC AGCCTCATAA AGGCTAATCT TCTTGCATCT 66979 .......... .......... .......... .......... .......... .......... 455 CATTCATTTC ACCAGTTGAA AGAGAAACTG ATGGTGGGAT CAAATCTTTT CTACTTCTTT 67039 .......... .......... .......... .......... .......... .......... 455 TCAGGGCAAA ATATGGGATA AATGAGATGT GCAGGGACCA GTGGAAATGG GCAAGCCAAA 67099 |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ....GGCAAA ATATGGGATA AATGAGATGT GCAGGGACCA GTGGAAATGG GCAAGCCAAA 511 ATCCTTGGGG TTACCAACCA AAGCCTTGAT ATGTTATAAT AATAATAATA ATAATACAAG 67159 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCCTTGGGG TTACCAACCA AAGCCTTGAT ATGTTATAAT AATAATAATA ATAATACAAG 571 TAGCACTTGG AGTACAAAAC TGTAGTCAAC ATCCTAGTAC TTTACATTTC AT 67211 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || TAGCACTTGG AGTACAAAAC TGTAGTCAAC ATCCTAGTAC TTTACATTTC AT 623 hqPGS_C08HBa0235H18.1+_SGN-E305446+ (65900 66097,66387 66468,66624 66706,66802 66893,67044 67211) ******************************************************************************** EST sequence 271 +strand 475 n (File: SGN-E245136+) 1 GTGACTGTAG CTTCTTTGTA TGAGGAAAAA AAAGAAACTG AATGACTCAA CATACCATCT 61 GTGACTAGAG TACATACGAA AGAAACAGAA AATGAAGAGC GAGCAGAAGT TAACAGCCGG 121 AACAACTTAT TGAACTACTA ATAATGAAGA GAAAAGACAG AAATATAGTT GAATATCCAA 181 ATATACTCAT GACATGAATC ACCTTTAACA TATTTTGCTT CTTGTACTTG ACTGTTAAAT 241 GATCTTTAAT CTATTTCTCA CTAGATACGA GATTATATCC ATGTTATGGA TTTGGCGGAC 301 GGTCATGTTG TTGCACTTCA GAGACTTCTA AGGCAGAATC ACATAGGTTG TGTTGCCTAC 361 AATTTGGGTA CTGGAAAAGG CAAATCTGTC CTAGAGATGG TTGGTGCCTT TGAAAAGGCG 421 TCTGGAAAGA AAATCCCGCT TAAAATGTGT CCAAGAAGAC CAGGAGATGC CACTG Predicted gene structure (within gDNA segment 65523 to 67457): Exon 1 66123 66468 ( 346 n); cDNA 1 346 ( 346 n); score: 1.000 Intron 1 66469 66623 ( 155 n); Pd: 0.998 (s: 1.00), Pa: 0.979 (s: 1.00) Exon 2 66624 66706 ( 83 n); cDNA 347 429 ( 83 n); score: 1.000 Intron 2 66707 66801 ( 95 n); Pd: 0.000 (s: 1.00), Pa: 0.997 (s: 1.00) Exon 3 66802 66847 ( 46 n); cDNA 430 475 ( 46 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E245136+ 1.000 475 1.000 C PGS_C08HBa0235H18.1+_SGN-E245136+ (66123 66468,66624 66706,66802 66847) Alignment (genomic DNA sequence = upper lines): GTGACTGTAG CTTCTTTGTA TGAGGAAAAA AAAGAAACTG AATGACTCAA CATACCATCT 66182 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGACTGTAG CTTCTTTGTA TGAGGAAAAA AAAGAAACTG AATGACTCAA CATACCATCT 60 GTGACTAGAG TACATACGAA AGAAACAGAA AATGAAGAGC GAGCAGAAGT TAACAGCCGG 66242 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGACTAGAG TACATACGAA AGAAACAGAA AATGAAGAGC GAGCAGAAGT TAACAGCCGG 120 AACAACTTAT TGAACTACTA ATAATGAAGA GAAAAGACAG AAATATAGTT GAATATCCAA 66302 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACAACTTAT TGAACTACTA ATAATGAAGA GAAAAGACAG AAATATAGTT GAATATCCAA 180 ATATACTCAT GACATGAATC ACCTTTAACA TATTTTGCTT CTTGTACTTG ACTGTTAAAT 66362 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATACTCAT GACATGAATC ACCTTTAACA TATTTTGCTT CTTGTACTTG ACTGTTAAAT 240 GATCTTTAAT CTATTTCTCA CTAGATACGA GATTATATCC ATGTTATGGA TTTGGCGGAC 66422 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATCTTTAAT CTATTTCTCA CTAGATACGA GATTATATCC ATGTTATGGA TTTGGCGGAC 300 GGTCATGTTG TTGCACTTCA GAGACTTCTA AGGCAGAATC ACATAGGTAA GTAATCCTTT 66482 |||||||||| |||||||||| |||||||||| |||||||||| |||||| GGTCATGTTG TTGCACTTCA GAGACTTCTA AGGCAGAATC ACATAG.... .......... 346 TCAAAGCAAA GTTTAGATCT GAATTCTTTT GACGTTAGTT CGAGCTAATG ATACCCTTTT 66542 .......... .......... .......... .......... .......... .......... 346 GTATGATTTT GACATTTCAT ATATTTCGGT TGAAGGTAAC ATCTTGTGAC ATTTGTTCTT 66602 .......... .......... .......... .......... .......... .......... 346 CTGTTTAATG GTTTGCATTA GGTTGTGTTG CCTACAATTT GGGTACTGGA AAAGGCAAAT 66662 ||||||||| |||||||||| |||||||||| |||||||||| .......... .......... .GTTGTGTTG CCTACAATTT GGGTACTGGA AAAGGCAAAT 385 CTGTCCTAGA GATGGTTGGT GCCTTTGAAA AGGCGTCTGG AAAGGTCTCT TAACGGAACA 66722 |||||||||| |||||||||| |||||||||| |||||||||| |||| CTGTCCTAGA GATGGTTGGT GCCTTTGAAA AGGCGTCTGG AAAG...... .......... 429 CGCTAAACCA TACTTAGTAG AATTTGAACA AAGCAACAAT CTCATATTAT GTTGTACTAA 66782 .......... .......... .......... .......... .......... .......... 429 TATATTATTT TTGTTCCAGA AAATCCCGCT TAAAATGTGT CCAAGAAGAC CAGGAGATGC 66842 | |||||||||| |||||||||| |||||||||| |||||||||| .......... .........A AAATCCCGCT TAAAATGTGT CCAAGAAGAC CAGGAGATGC 470 CACTG 66847 ||||| CACTG 475 hqPGS_C08HBa0235H18.1+_SGN-E245136+ (66123 66468,66624 66706,66802 66847) ******************************************************************************** EST sequence 106 +strand 447 n (File: SGN-E216547+) 1 ACTTCTAAGG CAGAATCACA TAGGTTGCGT TGCCTACAAT TTGGGTACTG GAAAAGGCAA 61 ATCTGTCCTA GAGATGGTTG GTGCCTTTGA AAAGGCGTCT GGAAAGAAAA TCCCGCTTAA 121 AATGTGTCCA AGAAGACCAG GAGATGCCAC TGCTGTTTAC GCATCTACTG AAAAAGCTGA 181 GAAGGAGCTC GGTTGGAAGG CAAAATATGG GATAAATGAG ATGTGCAGGG ACCAGTGGAA 241 ATGGGCAAGC CAAAATCCTT GGGGTTACCA ACCAAAGCCT TGATATGTTA TAATAATAAT 301 AATAATAATT CAAGTAGCAC TTGGAGTACA AAACTGTAGT CAACATTCTA GTACTTTACA 361 TTTCATGCAA ACATTAGATG TATCCAAGGA CAAAAGTGTT CATCCATAAT AGTTGTTGAT 421 GGTTATGTAC TACTAAACCC TGTTGTT Predicted gene structure (within gDNA segment 65749 to 67902): Exon 1 66446 66468 ( 23 n); cDNA 1 23 ( 23 n); score: 1.000 Intron 1 66469 66623 ( 155 n); Pd: 0.998 (s: 0), Pa: 0.979 (s: 0.98) Exon 2 66624 66706 ( 83 n); cDNA 24 106 ( 83 n); score: 0.988 Intron 2 66707 66801 ( 95 n); Pd: 0.000 (s: 1.00), Pa: 0.997 (s: 1.00) Exon 3 66802 66893 ( 92 n); cDNA 107 198 ( 92 n); score: 1.000 Intron 3 66894 67043 ( 150 n); Pd: 0.997 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 4 67044 67292 ( 249 n); cDNA 199 447 ( 249 n); score: 0.992 MATCH C08HBa0235H18.1+ SGN-E216547+ 0.993 447 1.000 C PGS_C08HBa0235H18.1+_SGN-E216547+ (66446 66468,66624 66706,66802 66893,67044 67292) Alignment (genomic DNA sequence = upper lines): ACTTCTAAGG CAGAATCACA TAGGTAAGTA ATCCTTTTCA AAGCAAAGTT TAGATCTGAA 66505 |||||||||| |||||||||| ||| ACTTCTAAGG CAGAATCACA TAG....... .......... .......... .......... 23 TTCTTTTGAC GTTAGTTCGA GCTAATGATA CCCTTTTGTA TGATTTTGAC ATTTCATATA 66565 .......... .......... .......... .......... .......... .......... 23 TTTCGGTTGA AGGTAACATC TTGTGACATT TGTTCTTCTG TTTAATGGTT TGCATTAGGT 66625 || .......... .......... .......... .......... .......... ........GT 25 TGTGTTGCCT ACAATTTGGG TACTGGAAAA GGCAAATCTG TCCTAGAGAT GGTTGGTGCC 66685 || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCGTTGCCT ACAATTTGGG TACTGGAAAA GGCAAATCTG TCCTAGAGAT GGTTGGTGCC 85 TTTGAAAAGG CGTCTGGAAA GGTCTCTTAA CGGAACACGC TAAACCATAC TTAGTAGAAT 66745 |||||||||| |||||||||| | TTTGAAAAGG CGTCTGGAAA G......... .......... .......... .......... 106 TTGAACAAAG CAACAATCTC ATATTATGTT GTACTAATAT ATTATTTTTG TTCCAGAAAA 66805 |||| .......... .......... .......... .......... .......... ......AAAA 110 TCCCGCTTAA AATGTGTCCA AGAAGACCAG GAGATGCCAC TGCTGTTTAC GCATCTACTG 66865 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCCGCTTAA AATGTGTCCA AGAAGACCAG GAGATGCCAC TGCTGTTTAC GCATCTACTG 170 AAAAAGCTGA GAAGGAGCTC GGTTGGAAGT AAGTAGTAAA TGGTTATTTT TCTATTCTTG 66925 |||||||||| |||||||||| |||||||| AAAAAGCTGA GAAGGAGCTC GGTTGGAA.. .......... .......... .......... 198 GATCAACTGA TGCTTGTGCC TAGCAGCCTC ATAAAGGCTA ATCTTCTTGC ATCTCATTCA 66985 .......... .......... .......... .......... .......... .......... 198 TTTCACCAGT TGAAAGAGAA ACTGATGGTG GGATCAAATC TTTTCTACTT CTTTTCAGGG 67045 || .......... .......... .......... .......... .......... ........GG 200 CAAAATATGG GATAAATGAG ATGTGCAGGG ACCAGTGGAA ATGGGCAAGC CAAAATCCTT 67105 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAATATGG GATAAATGAG ATGTGCAGGG ACCAGTGGAA ATGGGCAAGC CAAAATCCTT 260 GGGGTTACCA ACCAAAGCCT TGATATGTTA TAATAATAAT AATAATAATA CAAGTAGCAC 67165 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| GGGGTTACCA ACCAAAGCCT TGATATGTTA TAATAATAAT AATAATAATT CAAGTAGCAC 320 TTGGAGTACA AAACTGTAGT CAACATCCTA GTACTTTACA TTTCATGCAA ACATTAGATG 67225 |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| TTGGAGTACA AAACTGTAGT CAACATTCTA GTACTTTACA TTTCATGCAA ACATTAGATG 380 TATCCAAGGA CAAAAGTGTT CATCCATAAT AGTTGTTGAT GGTTATGTAC TACTAAACCC 67285 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATCCAAGGA CAAAAGTGTT CATCCATAAT AGTTGTTGAT GGTTATGTAC TACTAAACCC 440 TGTTGTT 67292 ||||||| TGTTGTT 447 hqPGS_C08HBa0235H18.1+_SGN-E216547+ (66446 66468,66624 66706,66802 66893,67044 67292) ******************************************************************************** EST sequence 448 -strand 437 n (File: SGN-E215562-) 1 TCACATAGGT TGTGTTGCCT ACAATTTGGG TACTGGAAAA GGCAAATCTG TCCTAGAAAT 61 GGTTGGTGCC TTTGAAAAGG CGTCTGGAAA AAAAATCCCG CTTAAAATGT GTCCAAGAAG 121 ACCAGGAGAT GCCACTGCTG TTTACGCATC TACTGAAAAA GCTGAGAAGG AGCTCGGTTG 181 GAAGGCAAAA TATGGGATAA ATGAGATGTG CAGGGACCAG TGGAAATGGG CAAGCCAAAA 241 TCCTTGGGGT TACCAACCAA AGCCTTGATA TGTTATAATA ATAATAATAA TAATACAAGT 301 AGCACTTGGA GTACAAAACT GTAGTCAACA TCCTAGTACT TTACATTTCA TGCAAACATT 361 AGATGTATCC AAGGACAAAA GTGTTCATCC ATAATAGTTG TTGATGGTTA TGTACTNCTA 421 AAAAAAAAAA AAAAAAA Predicted gene structure (within gDNA segment 65961 to 68086): Exon 1 66461 66468 ( 8 n); cDNA 1 8 ( 8 n); score: 1.000 Intron 1 66469 66623 ( 155 n); Pd: 0.998 (s: 0), Pa: 0.979 (s: 0.98) Exon 2 66624 66706 ( 83 n); cDNA 9 91 ( 83 n); score: 0.976 Intron 2 66707 66801 ( 95 n); Pd: 0.000 (s: 0.96), Pa: 0.997 (s: 1.00) Exon 3 66802 66893 ( 92 n); cDNA 92 183 ( 92 n); score: 1.000 Intron 3 66894 67043 ( 150 n); Pd: 0.997 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 4 67044 67282 ( 239 n); cDNA 184 422 ( 239 n); score: 0.996 PPA cDNA 423 437 MATCH C08HBa0235H18.1+ SGN-E215562- 0.993 422 0.966 C PGS_C08HBa0235H18.1+_SGN-E215562- (66461 66468,66624 66706,66802 66893,67044 67282) Alignment (genomic DNA sequence = upper lines): TCACATAGGT AAGTAATCCT TTTCAAAGCA AAGTTTAGAT CTGAATTCTT TTGACGTTAG 66520 |||||||| TCACATAG.. .......... .......... .......... .......... .......... 8 TTCGAGCTAA TGATACCCTT TTGTATGATT TTGACATTTC ATATATTTCG GTTGAAGGTA 66580 .......... .......... .......... .......... .......... .......... 8 ACATCTTGTG ACATTTGTTC TTCTGTTTAA TGGTTTGCAT TAGGTTGTGT TGCCTACAAT 66640 ||||||| |||||||||| .......... .......... .......... .......... ...GTTGTGT TGCCTACAAT 25 TTGGGTACTG GAAAAGGCAA ATCTGTCCTA GAGATGGTTG GTGCCTTTGA AAAGGCGTCT 66700 |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| TTGGGTACTG GAAAAGGCAA ATCTGTCCTA GAAATGGTTG GTGCCTTTGA AAAGGCGTCT 85 GGAAAGGTCT CTTAACGGAA CACGCTAAAC CATACTTAGT AGAATTTGAA CAAAGCAACA 66760 ||||| GGAAAA.... .......... .......... .......... .......... .......... 91 ATCTCATATT ATGTTGTACT AATATATTAT TTTTGTTCCA GAAAATCCCG CTTAAAATGT 66820 ||||||||| |||||||||| .......... .......... .......... .......... .AAAATCCCG CTTAAAATGT 110 GTCCAAGAAG ACCAGGAGAT GCCACTGCTG TTTACGCATC TACTGAAAAA GCTGAGAAGG 66880 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCCAAGAAG ACCAGGAGAT GCCACTGCTG TTTACGCATC TACTGAAAAA GCTGAGAAGG 170 AGCTCGGTTG GAAGTAAGTA GTAAATGGTT ATTTTTCTAT TCTTGGATCA ACTGATGCTT 66940 |||||||||| ||| AGCTCGGTTG GAA....... .......... .......... .......... .......... 183 GTGCCTAGCA GCCTCATAAA GGCTAATCTT CTTGCATCTC ATTCATTTCA CCAGTTGAAA 67000 .......... .......... .......... .......... .......... .......... 183 GAGAAACTGA TGGTGGGATC AAATCTTTTC TACTTCTTTT CAGGGCAAAA TATGGGATAA 67060 ||||||| |||||||||| .......... .......... .......... .......... ...GGCAAAA TATGGGATAA 200 ATGAGATGTG CAGGGACCAG TGGAAATGGG CAAGCCAAAA TCCTTGGGGT TACCAACCAA 67120 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGAGATGTG CAGGGACCAG TGGAAATGGG CAAGCCAAAA TCCTTGGGGT TACCAACCAA 260 AGCCTTGATA TGTTATAATA ATAATAATAA TAATACAAGT AGCACTTGGA GTACAAAACT 67180 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCTTGATA TGTTATAATA ATAATAATAA TAATACAAGT AGCACTTGGA GTACAAAACT 320 GTAGTCAACA TCCTAGTACT TTACATTTCA TGCAAACATT AGATGTATCC AAGGACAAAA 67240 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTAGTCAACA TCCTAGTACT TTACATTTCA TGCAAACATT AGATGTATCC AAGGACAAAA 380 GTGTTCATCC ATAATAGTTG TTGATGGTTA TGTACTACTA AA 67282 |||||||||| |||||||||| |||||||||| |||||| ||| || GTGTTCATCC ATAATAGTTG TTGATGGTTA TGTACTNCTA AA 422 hqPGS_C08HBa0235H18.1+_SGN-E215562- (66461 66468,66624 66706,66802 66893,67044 67282) ******************************************************************************** EST sequence 313 +strand 471 n (File: SGN-E246170+) 1 TTGCATTAGG TTGTGTTGCC TACAATTTGG GTACTGGAAA AGGCAAATCT GTCCTAGAGA 61 TGGTTGGTGC CTTTGAAAAG GCGTCTGGAA AGAAAATCCC GCTTAAAATG TGTCCAAGAA 121 GACCAGGAGA TGCCACTGCT GTTTACGCAT CTACTGAAAA AGCTGAGAAG GAGCTCGGTT 181 GGAAGGCAAA ATATGGGATA AATGAGATGT GCAGGGACCA GTGGAAATGG GCAAGCCAAA 241 ATCCTTGGGG TTACCAACCA AAGCCTTGAT ATGTTATAAT AATAATAATA ATAATACAAG 301 TAGCACTTGG AGTACAAAAC TGTAGTCAAC ATCCTAGTAC TTTACATTTC ATGCAAACAT 361 TAGATGTATC CAAGGACAAA AGTGTTCATC CATAATAGTT GTTGATGGTT ATGTACTACT 421 AAACCCTGTT GTTGTCTCCC TTAAAGGTTT TATGGGAACT TGAATGTTCA T Predicted gene structure (within gDNA segment 66015 to 67940): Exon 1 66615 66706 ( 92 n); cDNA 1 92 ( 92 n); score: 1.000 Intron 1 66707 66801 ( 95 n); Pd: 0.000 (s: 1.00), Pa: 0.997 (s: 1.00) Exon 2 66802 66893 ( 92 n); cDNA 93 184 ( 92 n); score: 1.000 Intron 2 66894 67043 ( 150 n); Pd: 0.997 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 3 67044 67330 ( 287 n); cDNA 185 471 ( 287 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E246170+ 1.000 471 1.000 C PGS_C08HBa0235H18.1+_SGN-E246170+ (66615 66706,66802 66893,67044 67330) Alignment (genomic DNA sequence = upper lines): TTGCATTAGG TTGTGTTGCC TACAATTTGG GTACTGGAAA AGGCAAATCT GTCCTAGAGA 66674 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCATTAGG TTGTGTTGCC TACAATTTGG GTACTGGAAA AGGCAAATCT GTCCTAGAGA 60 TGGTTGGTGC CTTTGAAAAG GCGTCTGGAA AGGTCTCTTA ACGGAACACG CTAAACCATA 66734 |||||||||| |||||||||| |||||||||| || TGGTTGGTGC CTTTGAAAAG GCGTCTGGAA AG........ .......... .......... 92 CTTAGTAGAA TTTGAACAAA GCAACAATCT CATATTATGT TGTACTAATA TATTATTTTT 66794 .......... .......... .......... .......... .......... .......... 92 GTTCCAGAAA ATCCCGCTTA AAATGTGTCC AAGAAGACCA GGAGATGCCA CTGCTGTTTA 66854 ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| .......AAA ATCCCGCTTA AAATGTGTCC AAGAAGACCA GGAGATGCCA CTGCTGTTTA 145 CGCATCTACT GAAAAAGCTG AGAAGGAGCT CGGTTGGAAG TAAGTAGTAA ATGGTTATTT 66914 |||||||||| |||||||||| |||||||||| ||||||||| CGCATCTACT GAAAAAGCTG AGAAGGAGCT CGGTTGGAA. .......... .......... 184 TTCTATTCTT GGATCAACTG ATGCTTGTGC CTAGCAGCCT CATAAAGGCT AATCTTCTTG 66974 .......... .......... .......... .......... .......... .......... 184 CATCTCATTC ATTTCACCAG TTGAAAGAGA AACTGATGGT GGGATCAAAT CTTTTCTACT 67034 .......... .......... .......... .......... .......... .......... 184 TCTTTTCAGG GCAAAATATG GGATAAATGA GATGTGCAGG GACCAGTGGA AATGGGCAAG 67094 | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| .........G GCAAAATATG GGATAAATGA GATGTGCAGG GACCAGTGGA AATGGGCAAG 235 CCAAAATCCT TGGGGTTACC AACCAAAGCC TTGATATGTT ATAATAATAA TAATAATAAT 67154 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAAAATCCT TGGGGTTACC AACCAAAGCC TTGATATGTT ATAATAATAA TAATAATAAT 295 ACAAGTAGCA CTTGGAGTAC AAAACTGTAG TCAACATCCT AGTACTTTAC ATTTCATGCA 67214 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAGTAGCA CTTGGAGTAC AAAACTGTAG TCAACATCCT AGTACTTTAC ATTTCATGCA 355 AACATTAGAT GTATCCAAGG ACAAAAGTGT TCATCCATAA TAGTTGTTGA TGGTTATGTA 67274 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACATTAGAT GTATCCAAGG ACAAAAGTGT TCATCCATAA TAGTTGTTGA TGGTTATGTA 415 CTACTAAACC CTGTTGTTGT CTCCCTTAAA GGTTTTATGG GAACTTGAAT GTTCAT 67330 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| CTACTAAACC CTGTTGTTGT CTCCCTTAAA GGTTTTATGG GAACTTGAAT GTTCAT 471 hqPGS_C08HBa0235H18.1+_SGN-E246170+ (66615 66706,66802 66893,67044 67330) ******************************************************************************** EST sequence 449 -strand 394 n (File: SGN-E215894-) 1 AAATCTGTCC TAGAGATGGT TGGTGCCTTT GAAAAGGCGT CTGGAAAGAA AATCCCGCTT 61 AAAATGTGTC CAAGAAGACC AGGAGATGCC ACTGCTGTTT ACGCATCTAC TGAAAAAGCT 121 GAGAAGGAGC TCGGTTGGAA GGCAAAATAT GGGATAAATG AGATGTGCAG GGACCAGTGG 181 AAATGGGCAA GCCAAAATCC TTGGGGTTAC CAACCAAAGC CTTGATATGT TATAATAATA 241 ATAATAATAA TACAAGTAGC ACTTGGAGTA CAAAACTGTA GTCAACATCC TAGTACTTTA 301 CATTTCATGC AAACATTAGA TGTATCCAAG GACAAAAGTG TTCATCCATA ATAGTTGTTG 361 ATGGTTATGT CCTCCTAAAA AAAAAAAAAA AAAA Predicted gene structure (within gDNA segment 66049 to 68113): Exon 1 66659 66706 ( 48 n); cDNA 1 48 ( 48 n); score: 1.000 Intron 1 66707 66801 ( 95 n); Pd: 0.000 (s: 1.00), Pa: 0.997 (s: 1.00) Exon 2 66802 66893 ( 92 n); cDNA 49 140 ( 92 n); score: 1.000 Intron 2 66894 67043 ( 150 n); Pd: 0.997 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 3 67044 67282 ( 239 n); cDNA 141 379 ( 239 n); score: 0.992 PPA cDNA 380 394 MATCH C08HBa0235H18.1+ SGN-E215894- 0.994 379 0.962 C PGS_C08HBa0235H18.1+_SGN-E215894- (66659 66706,66802 66893,67044 67282) Alignment (genomic DNA sequence = upper lines): AAATCTGTCC TAGAGATGGT TGGTGCCTTT GAAAAGGCGT CTGGAAAGGT CTCTTAACGG 66718 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| AAATCTGTCC TAGAGATGGT TGGTGCCTTT GAAAAGGCGT CTGGAAAG.. .......... 48 AACACGCTAA ACCATACTTA GTAGAATTTG AACAAAGCAA CAATCTCATA TTATGTTGTA 66778 .......... .......... .......... .......... .......... .......... 48 CTAATATATT ATTTTTGTTC CAGAAAATCC CGCTTAAAAT GTGTCCAAGA AGACCAGGAG 66838 ||||||| |||||||||| |||||||||| |||||||||| .......... .......... ...AAAATCC CGCTTAAAAT GTGTCCAAGA AGACCAGGAG 85 ATGCCACTGC TGTTTACGCA TCTACTGAAA AAGCTGAGAA GGAGCTCGGT TGGAAGTAAG 66898 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| ATGCCACTGC TGTTTACGCA TCTACTGAAA AAGCTGAGAA GGAGCTCGGT TGGAA..... 140 TAGTAAATGG TTATTTTTCT ATTCTTGGAT CAACTGATGC TTGTGCCTAG CAGCCTCATA 66958 .......... .......... .......... .......... .......... .......... 140 AAGGCTAATC TTCTTGCATC TCATTCATTT CACCAGTTGA AAGAGAAACT GATGGTGGGA 67018 .......... .......... .......... .......... .......... .......... 140 TCAAATCTTT TCTACTTCTT TTCAGGGCAA AATATGGGAT AAATGAGATG TGCAGGGACC 67078 ||||| |||||||||| |||||||||| |||||||||| .......... .......... .....GGCAA AATATGGGAT AAATGAGATG TGCAGGGACC 175 AGTGGAAATG GGCAAGCCAA AATCCTTGGG GTTACCAACC AAAGCCTTGA TATGTTATAA 67138 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTGGAAATG GGCAAGCCAA AATCCTTGGG GTTACCAACC AAAGCCTTGA TATGTTATAA 235 TAATAATAAT AATAATACAA GTAGCACTTG GAGTACAAAA CTGTAGTCAA CATCCTAGTA 67198 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATAATAAT AATAATACAA GTAGCACTTG GAGTACAAAA CTGTAGTCAA CATCCTAGTA 295 CTTTACATTT CATGCAAACA TTAGATGTAT CCAAGGACAA AAGTGTTCAT CCATAATAGT 67258 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTACATTT CATGCAAACA TTAGATGTAT CCAAGGACAA AAGTGTTCAT CCATAATAGT 355 TGTTGATGGT TATGTACTAC TAAA 67282 |||||||||| ||||| || | |||| TGTTGATGGT TATGTCCTCC TAAA 379 hqPGS_C08HBa0235H18.1+_SGN-E215894- (66659 66706,66802 66893,67044 67282) ******************************************************************************** EST sequence 699 -strand 475 n (File: SGN-E304181-) 1 AAATCCCGCT TAAAATGTGT CCAAGAAGAC CAGGAGATGC CACTGCTGTT TACGCATCTA 61 CTGAAAAAGC TGAGAAGGAG CTCGGTTGGA AGGCAAAATA TGGGATAAAT GAGATGTGCA 121 GGGACCAGTG GAAATGGGCA AGCCAAAATC CTTGGGGTTA CCAACCAAAG CCTTGATATG 181 TTATAATAAT AATAATAATA ATACAAGTAG CACTTGGAGT ACAAAACTGT AGTCAACATC 241 CTAGTACTTT ACATTTCATG CAAACATTAG ATGTATCCAA GGACAAAAGT GTTCATCCAT 301 AATAGTTGTT GATGGTTATG TACTACTAAA CCCTGTTGTT GTCTCCCTTA AAGGTTTTAT 361 GGGAACTTGA ATGTTCATCC TATTATGATC CCTTCAACCA AATCTCTTTA CTGATTGTAA 421 TTCATTCAAA AAGAGTAAAT GATCTAGTCT ACTATGCTAA AAAAAAAAAA AAAAA Predicted gene structure (within gDNA segment 66193 to 68171): Exon 1 66803 66893 ( 91 n); cDNA 1 91 ( 91 n); score: 1.000 Intron 1 66894 67043 ( 150 n); Pd: 0.997 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 2 67044 67410 ( 367 n); cDNA 92 458 ( 367 n); score: 1.000 PPA cDNA 459 475 MATCH C08HBa0235H18.1+ SGN-E304181- 1.000 458 0.964 C PGS_C08HBa0235H18.1+_SGN-E304181- (66803 66893,67044 67410) Alignment (genomic DNA sequence = upper lines): AAATCCCGCT TAAAATGTGT CCAAGAAGAC CAGGAGATGC CACTGCTGTT TACGCATCTA 66862 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATCCCGCT TAAAATGTGT CCAAGAAGAC CAGGAGATGC CACTGCTGTT TACGCATCTA 60 CTGAAAAAGC TGAGAAGGAG CTCGGTTGGA AGTAAGTAGT AAATGGTTAT TTTTCTATTC 66922 |||||||||| |||||||||| |||||||||| | CTGAAAAAGC TGAGAAGGAG CTCGGTTGGA A......... .......... .......... 91 TTGGATCAAC TGATGCTTGT GCCTAGCAGC CTCATAAAGG CTAATCTTCT TGCATCTCAT 66982 .......... .......... .......... .......... .......... .......... 91 TCATTTCACC AGTTGAAAGA GAAACTGATG GTGGGATCAA ATCTTTTCTA CTTCTTTTCA 67042 .......... .......... .......... .......... .......... .......... 91 GGGCAAAATA TGGGATAAAT GAGATGTGCA GGGACCAGTG GAAATGGGCA AGCCAAAATC 67102 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| .GGCAAAATA TGGGATAAAT GAGATGTGCA GGGACCAGTG GAAATGGGCA AGCCAAAATC 150 CTTGGGGTTA CCAACCAAAG CCTTGATATG TTATAATAAT AATAATAATA ATACAAGTAG 67162 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGGGGTTA CCAACCAAAG CCTTGATATG TTATAATAAT AATAATAATA ATACAAGTAG 210 CACTTGGAGT ACAAAACTGT AGTCAACATC CTAGTACTTT ACATTTCATG CAAACATTAG 67222 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACTTGGAGT ACAAAACTGT AGTCAACATC CTAGTACTTT ACATTTCATG CAAACATTAG 270 ATGTATCCAA GGACAAAAGT GTTCATCCAT AATAGTTGTT GATGGTTATG TACTACTAAA 67282 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGTATCCAA GGACAAAAGT GTTCATCCAT AATAGTTGTT GATGGTTATG TACTACTAAA 330 CCCTGTTGTT GTCTCCCTTA AAGGTTTTAT GGGAACTTGA ATGTTCATCC TATTATGATC 67342 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCTGTTGTT GTCTCCCTTA AAGGTTTTAT GGGAACTTGA ATGTTCATCC TATTATGATC 390 CCTTCAACCA AATCTCTTTA CTGATTGTAA TTCATTCAAA AAGAGTAAAT GATCTAGTCT 67402 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTCAACCA AATCTCTTTA CTGATTGTAA TTCATTCAAA AAGAGTAAAT GATCTAGTCT 450 ACTATGCT 67410 |||||||| ACTATGCT 458 hqPGS_C08HBa0235H18.1+_SGN-E304181- (66803 66893,67044 67410) ******************************************************************************** EST sequence 325 +strand 776 n (File: SGN-E543704+) 1 CTAATTAGTT ATCTCTATGC AAATTTGCTC AATTGGCTGC AAAAGTATCC CAGACTTTTT 61 GGTCAAATTG TTCTTTTGAG AGTAATCATT TGCTAACAGT TGAGGAAAGG AGAGAACTAT 121 GAAAGAAGAA GGTAATGTGA TGGTGACTGC TCAGACAATC ATATCTGGTG CTTCTCCTTC 181 TCCTACATTA ACTCCACAAC CACCTTTGCC AACACCATCA CCATATTCGT TCTCAGTGGC 241 ATCGACAAGG TTGAGATCAA GGCCTTCTAT ATATGCATAT GATCTTGCCC TAAGATCACT 301 GGCACTTCTG TTCTCTTTCA TATCTGCTCT TTCACTAGCT GTACCATCAC CAACAAGGAC 361 AAAACGAGGA ACGATTTCAA AATTCTGTGA TTACCCACAA TTAACGTAAG AATCAACACA 421 GGATTTCAGG ATTTAAACTA AGACAACATT CAGTTCTATG GTTTTGAGAG CTGTTTTTAC 481 ACTACTGCAG GTACTGCTTC AGTGTAAGCG TATTAGCTTT TATCTACTCA GCTTTTCAAC 541 TCTTCAAAAG AGTTTGTGAC ATCGCTTATA GAGGTGTCTT GATCTCCGAT AAGACCTCTG 601 ACTATCTCAG TTTCATACTC GATCAGTTGA CAGGTTACCT CCTCGTGTCC TCTTCTTCAG 661 TAACTATACC AGTCATTNCA GAGATGGATA TCCAAGCCTC TCTCTGGAAG GCAGCTATTC 721 TTGCTGTTTG CATGTCATTT GCTGCTTTCA TGGTCCTTGC AGTGTCTGCA CTTTTA Predicted gene structure (within gDNA segment 66976 to 69359): Exon 1 67576 68201 ( 626 n); cDNA 1 626 ( 626 n); score: 1.000 Intron 1 68202 68599 ( 398 n); Pd: 0.983 (s: 1.00), Pa: 0.000 (s: 1.00) Exon 2 68600 68749 ( 150 n); cDNA 627 776 ( 150 n); score: 0.987 MATCH C08HBa0235H18.1+ SGN-E543704+ 0.997 776 1.000 C PGS_C08HBa0235H18.1+_SGN-E543704+ (67576 68201,68600 68749) Alignment (genomic DNA sequence = upper lines): CTAATTAGTT ATCTCTATGC AAATTTGCTC AATTGGCTGC AAAAGTATCC CAGACTTTTT 67635 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAATTAGTT ATCTCTATGC AAATTTGCTC AATTGGCTGC AAAAGTATCC CAGACTTTTT 60 GGTCAAATTG TTCTTTTGAG AGTAATCATT TGCTAACAGT TGAGGAAAGG AGAGAACTAT 67695 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTCAAATTG TTCTTTTGAG AGTAATCATT TGCTAACAGT TGAGGAAAGG AGAGAACTAT 120 GAAAGAAGAA GGTAATGTGA TGGTGACTGC TCAGACAATC ATATCTGGTG CTTCTCCTTC 67755 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAAGAAGAA GGTAATGTGA TGGTGACTGC TCAGACAATC ATATCTGGTG CTTCTCCTTC 180 TCCTACATTA ACTCCACAAC CACCTTTGCC AACACCATCA CCATATTCGT TCTCAGTGGC 67815 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTACATTA ACTCCACAAC CACCTTTGCC AACACCATCA CCATATTCGT TCTCAGTGGC 240 ATCGACAAGG TTGAGATCAA GGCCTTCTAT ATATGCATAT GATCTTGCCC TAAGATCACT 67875 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCGACAAGG TTGAGATCAA GGCCTTCTAT ATATGCATAT GATCTTGCCC TAAGATCACT 300 GGCACTTCTG TTCTCTTTCA TATCTGCTCT TTCACTAGCT GTACCATCAC CAACAAGGAC 67935 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCACTTCTG TTCTCTTTCA TATCTGCTCT TTCACTAGCT GTACCATCAC CAACAAGGAC 360 AAAACGAGGA ACGATTTCAA AATTCTGTGA TTACCCACAA TTAACGTAAG AATCAACACA 67995 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAACGAGGA ACGATTTCAA AATTCTGTGA TTACCCACAA TTAACGTAAG AATCAACACA 420 GGATTTCAGG ATTTAAACTA AGACAACATT CAGTTCTATG GTTTTGAGAG CTGTTTTTAC 68055 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGATTTCAGG ATTTAAACTA AGACAACATT CAGTTCTATG GTTTTGAGAG CTGTTTTTAC 480 ACTACTGCAG GTACTGCTTC AGTGTAAGCG TATTAGCTTT TATCTACTCA GCTTTTCAAC 68115 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTACTGCAG GTACTGCTTC AGTGTAAGCG TATTAGCTTT TATCTACTCA GCTTTTCAAC 540 TCTTCAAAAG AGTTTGTGAC ATCGCTTATA GAGGTGTCTT GATCTCCGAT AAGACCTCTG 68175 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTCAAAAG AGTTTGTGAC ATCGCTTATA GAGGTGTCTT GATCTCCGAT AAGACCTCTG 600 ACTATCTCAG TTTCATACTC GATCAGGTAT ATACTAACTT TAATAAGCTA GAGATTACTT 68235 |||||||||| |||||||||| |||||| ACTATCTCAG TTTCATACTC GATCAG.... .......... .......... .......... 626 CCGAGTCCAA AACCTAAAGG AAGCTGGCTC ACTGTTTCAC ATGTAACTAC GACCATAAAA 68295 .......... .......... .......... .......... .......... .......... 626 TGGTTGCATC CCTACCTTTA GTTCAAACTA GTAGCAAGAA TTTACTCTCT CACTTGGGAT 68355 .......... .......... .......... .......... .......... .......... 626 TTCGCCTGAT GTATCATCAA CATCTACGCT CTATTATCCA CTAACAGTGA AACTTTATGT 68415 .......... .......... .......... .......... .......... .......... 626 TGAACAATAA TGGCAAGAAA CAGAAATCAT CTTATAGGAA GAAACAAAGA GTAGAAGCAT 68475 .......... .......... .......... .......... .......... .......... 626 CTTATTTGAA TATCAAGCAT CCTAAATTTC ATTTCTTCTG AATGCTTCTC TCTAGTTCTC 68535 .......... .......... .......... .......... .......... .......... 626 CTTTTCATTT ACTGCAGATA AATATTTCTA AACAACGAAT TCTCATAAGC AGAATGTTTT 68595 .......... .......... .......... .......... .......... .......... 626 ACAGTTGACA GGTTACCTCC TCGTGTCCTC TTCTTCAGTA ACTATACCAG TCATTCAAGA 68655 |||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| ||| ....TTGACA GGTTACCTCC TCGTGTCCTC TTCTTCAGTA ACTATACCAG TCATTNCAGA 682 GATGGATATC CAAGCCTCTC TCTGGAAGGC AGCTATTCTT GCTGTTTGCA TGTCATTTGC 68715 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGGATATC CAAGCCTCTC TCTGGAAGGC AGCTATTCTT GCTGTTTGCA TGTCATTTGC 742 TGCTTTCATG GTCCTTGCAG TGTCTGCACT TTTA 68749 |||||||||| |||||||||| |||||||||| |||| TGCTTTCATG GTCCTTGCAG TGTCTGCACT TTTA 776 hqPGS_C08HBa0235H18.1+_SGN-E543704+ (67576 68201,68600 68749) ******************************************************************************** EST sequence 1008 -strand 839 n (File: SGN-E543703-) 1 TAGCTGTACC ATCACCAACA AGGACAAAAC GAGGAACGAT TTCAAAATTC TGTGATTACC 61 CACAATTAAC GTAAGAATCA ACACAGGATT TCAGGATTTA AACTAAGACA ACATTCAGTT 121 CTATGGTTTT GAGAGCTGTT TTTACACTAC TGCAGGTACT GCTTCAGTGT AAGCGTATTA 181 GCTTTTATCT ACTCAGCTTT TCAACTCTTC AAAAGAGTTT GTGACATCGC TTATAGAGGT 241 GTCTTGATCT CCGATAAGAC CTCTGACTAT CTCAGTTTCA TACTCGATCA GTTGACAGGT 301 TACCTCCTCG TGTCCTCTTC TTCAGTAACT ATACCAGTCA TTCAAGAGAT GGATATCCAA 361 GCCTCTCTCT GGAAGGCAGC TATTCTTGCT GTTTGCATGT CATTTGCTGC TTTCATGGTC 421 CTTGCAGTGT CTGCACTTTT ATCAGGCTAC AAGCTGTGCA AAAGGATCAT ATGGTGATGG 481 ACTGGGAATT GAACGTGCAG CCTTCAACTC CAGGATTGAC AAAGCAATCG TAGTGTAAAA 541 TGGGACATGA TTTCTTCGAT CTGCTTGAAG CATCACAAGA AGCAATTGGG TGGCAGATAC 601 CAAATATCCT CTACTACACT AATGGTCTGG TAGAAGTTGA TAACAGTAAG AAGAGGGTTT 661 CAGAAGTTTA TAGCAAAGAA TAGAAATATT TTTGGAGGAA AATATCCATA TACCACTATG 721 AATTGTTGTC CCACCGCCCA TGGTGAATGA ACCAGTATTA AGTAGTAACA AACTNAGTTT 781 GAACTTCCTT GCTTCGANAG TATAACAANA AACTTACAGT TCTTTTTCTA AAAAAAAAA Predicted gene structure (within gDNA segment 67301 to 69822): Exon 1 67911 68201 ( 291 n); cDNA 1 291 ( 291 n); score: 1.000 Intron 1 68202 68599 ( 398 n); Pd: 0.983 (s: 1.00), Pa: 0.000 (s: 1.00) Exon 2 68600 69139 ( 540 n); cDNA 292 837 ( 546 n); score: 0.967 MATCH C08HBa0235H18.1+ SGN-E543703- 0.978 831 0.990 C PGS_C08HBa0235H18.1+_SGN-E543703- (67911 68201,68600 69139) Alignment (genomic DNA sequence = upper lines): TAGCTGTACC ATCACCAACA AGGACAAAAC GAGGAACGAT TTCAAAATTC TGTGATTACC 67970 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGCTGTACC ATCACCAACA AGGACAAAAC GAGGAACGAT TTCAAAATTC TGTGATTACC 60 CACAATTAAC GTAAGAATCA ACACAGGATT TCAGGATTTA AACTAAGACA ACATTCAGTT 68030 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACAATTAAC GTAAGAATCA ACACAGGATT TCAGGATTTA AACTAAGACA ACATTCAGTT 120 CTATGGTTTT GAGAGCTGTT TTTACACTAC TGCAGGTACT GCTTCAGTGT AAGCGTATTA 68090 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTATGGTTTT GAGAGCTGTT TTTACACTAC TGCAGGTACT GCTTCAGTGT AAGCGTATTA 180 GCTTTTATCT ACTCAGCTTT TCAACTCTTC AAAAGAGTTT GTGACATCGC TTATAGAGGT 68150 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTTTTATCT ACTCAGCTTT TCAACTCTTC AAAAGAGTTT GTGACATCGC TTATAGAGGT 240 GTCTTGATCT CCGATAAGAC CTCTGACTAT CTCAGTTTCA TACTCGATCA GGTATATACT 68210 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | GTCTTGATCT CCGATAAGAC CTCTGACTAT CTCAGTTTCA TACTCGATCA G......... 291 AACTTTAATA AGCTAGAGAT TACTTCCGAG TCCAAAACCT AAAGGAAGCT GGCTCACTGT 68270 .......... .......... .......... .......... .......... .......... 291 TTCACATGTA ACTACGACCA TAAAATGGTT GCATCCCTAC CTTTAGTTCA AACTAGTAGC 68330 .......... .......... .......... .......... .......... .......... 291 AAGAATTTAC TCTCTCACTT GGGATTTCGC CTGATGTATC ATCAACATCT ACGCTCTATT 68390 .......... .......... .......... .......... .......... .......... 291 ATCCACTAAC AGTGAAACTT TATGTTGAAC AATAATGGCA AGAAACAGAA ATCATCTTAT 68450 .......... .......... .......... .......... .......... .......... 291 AGGAAGAAAC AAAGAGTAGA AGCATCTTAT TTGAATATCA AGCATCCTAA ATTTCATTTC 68510 .......... .......... .......... .......... .......... .......... 291 TTCTGAATGC TTCTCTCTAG TTCTCCTTTT CATTTACTGC AGATAAATAT TTCTAAACAA 68570 .......... .......... .......... .......... .......... .......... 291 CGAATTCTCA TAAGCAGAAT GTTTTACAGT TGACAGGTTA CCTCCTCGTG TCCTCTTCTT 68630 | |||||||||| |||||||||| |||||||||| .......... .......... .........T TGACAGGTTA CCTCCTCGTG TCCTCTTCTT 322 CAGTAACTAT ACCAGTCATT CAAGAGATGG ATATCCAAGC CTCTCTCTGG AAGGCAGCTA 68690 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGTAACTAT ACCAGTCATT CAAGAGATGG ATATCCAAGC CTCTCTCTGG AAGGCAGCTA 382 TTCTTGCTGT TTGCATGTCA TTTGCTGCTT TCATGGTCCT TGCAGTGTCT GCACTTTTAT 68750 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTGCTGT TTGCATGTCA TTTGCTGCTT TCATGGTCCT TGCAGTGTCT GCACTTTTAT 442 CAGGCTACAA GCTGTGCAAA AGGATCATAT GGTGATGGAC TGGGAATTGA ACGTGCAGCC 68810 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGGCTACAA GCTGTGCAAA AGGATCATAT GGTGATGGAC TGGGAATTGA ACGTGCAGCC 502 TTCAACTCCA GGATTGACAA AGCAATCGTA GTGTAAAATG GGACATGATT TCTTCGATCT 68870 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCAACTCCA GGATTGACAA AGCAATCGTA GTGTAAAATG GGACATGATT TCTTCGATCT 562 GCTTGAAGCA TCACAAGAAG CAATTGGGTG GCAGATACCA AATATCCTCT ACTACACTAA 68930 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTTGAAGCA TCACAAGAAG CAATTGGGTG GCAGATACCA AATATCCTCT ACTACACTAA 622 TGGTCTGGTA GAAGTTGATA ACAGTAAGAA GAGGGTTTCA GAAGTTTATA GCAAAGAATA 68990 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTCTGGTA GAAGTTGATA ACAGTAAGAA GAGGGTTTCA GAAGTTTATA GCAAAGAATA 682 GAAATATTTT TGGAGGAAAA TATCCATATA -CACTATGAA TTGTTGTCCC ACCG-CCATG 69048 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||| ||||| GAAATATTTT TGGAGGAAAA TATCCATATA CCACTATGAA TTGTTGTCCC ACCGCCCATG 742 GTGAATGAA- CAGTATTAAG TAGTAACAAA CT-AGTTTGA ACTTCCTTGC TTCGA-AGTA 69105 ||||||||| |||||||||| |||||||||| || ||||||| |||||||||| ||||| |||| GTGAATGAAC CAGTATTAAG TAGTAACAAA CTNAGTTTGA ACTTCCTTGC TTCGANAGTA 802 TAACAA-AAA CTTACAGTTC TTTTTCTACA GATAA 69139 |||||| ||| |||||||||| |||||||| | | || TAACAANAAA CTTACAGTTC TTTTTCTAAA AAAAA 837 hqPGS_C08HBa0235H18.1+_SGN-E543703- (67911 68201,68600 69139) ******************************************************************************** EST sequence 46 +strand 620 n (File: SGN-E304411+) 1 TAATTAGTTA TCTCTATGCA AATTTGCTCA ATTGGCTGCA AAAGTATCCC AGACTTTTTG 61 GTCAAATTGT TCTTTTGAGA GTAATCATTT GCTAACAGTT GAGGAAAGGA GAGAACTATG 121 AAAGAAGAAG GTAATGTGAT GGTGACTGCT CAGACAATCA TATCTGGTGC TTCTCCTTCT 181 CCTACATTAA CTCCACAACC ACCTTTGCCA ACACCATCAC CATATTCGTT CTCAGTGGCA 241 TCGACAAGGT TGAGATCAAG GCCTTCTATA TATGCATATG ATCTTGCCCT AAGATCACTG 301 GCACTTCTGT TCTCTTTCAT ATCTGCTCTT TCACTAGCTG TACCATCACC AACAAGGACA 361 AAACGAGGAA CGATTTCAAA ATTCTGTGAT TACCCACAAT TAACGTAAGA ATCAACACAG 421 GATTTCAGGA TTTAAACTAA GACAACATTC AGTTCTATGG TTTTGAGAGC TGTTTTTACA 481 CTACTGCANG TACTGCTTCA GTGTAAGCGT ATTAGCTGTT ATCTACTCAG CTTTTCAACT 541 CTTCAAAAGA GTGTGTGACA TCGCTTATAG AGGTGTCTAG ATCTCCGATA AGACCTCTGA 601 CTATCTCAGT TTCATACTCG Predicted gene structure (within gDNA segment 66977 to 68806): Exon 1 67577 68196 ( 620 n); cDNA 1 620 ( 620 n); score: 0.994 MATCH C08HBa0235H18.1+ SGN-E304411+ 0.994 620 1.000 C PGS_C08HBa0235H18.1+_SGN-E304411+ (67577 68196) Alignment (genomic DNA sequence = upper lines): TAATTAGTTA TCTCTATGCA AATTTGCTCA ATTGGCTGCA AAAGTATCCC AGACTTTTTG 67636 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATTAGTTA TCTCTATGCA AATTTGCTCA ATTGGCTGCA AAAGTATCCC AGACTTTTTG 60 GTCAAATTGT TCTTTTGAGA GTAATCATTT GCTAACAGTT GAGGAAAGGA GAGAACTATG 67696 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCAAATTGT TCTTTTGAGA GTAATCATTT GCTAACAGTT GAGGAAAGGA GAGAACTATG 120 AAAGAAGAAG GTAATGTGAT GGTGACTGCT CAGACAATCA TATCTGGTGC TTCTCCTTCT 67756 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGAAGAAG GTAATGTGAT GGTGACTGCT CAGACAATCA TATCTGGTGC TTCTCCTTCT 180 CCTACATTAA CTCCACAACC ACCTTTGCCA ACACCATCAC CATATTCGTT CTCAGTGGCA 67816 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTACATTAA CTCCACAACC ACCTTTGCCA ACACCATCAC CATATTCGTT CTCAGTGGCA 240 TCGACAAGGT TGAGATCAAG GCCTTCTATA TATGCATATG ATCTTGCCCT AAGATCACTG 67876 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGACAAGGT TGAGATCAAG GCCTTCTATA TATGCATATG ATCTTGCCCT AAGATCACTG 300 GCACTTCTGT TCTCTTTCAT ATCTGCTCTT TCACTAGCTG TACCATCACC AACAAGGACA 67936 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCACTTCTGT TCTCTTTCAT ATCTGCTCTT TCACTAGCTG TACCATCACC AACAAGGACA 360 AAACGAGGAA CGATTTCAAA ATTCTGTGAT TACCCACAAT TAACGTAAGA ATCAACACAG 67996 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACGAGGAA CGATTTCAAA ATTCTGTGAT TACCCACAAT TAACGTAAGA ATCAACACAG 420 GATTTCAGGA TTTAAACTAA GACAACATTC AGTTCTATGG TTTTGAGAGC TGTTTTTACA 68056 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATTTCAGGA TTTAAACTAA GACAACATTC AGTTCTATGG TTTTGAGAGC TGTTTTTACA 480 CTACTGCAGG TACTGCTTCA GTGTAAGCGT ATTAGCTTTT ATCTACTCAG CTTTTCAACT 68116 |||||||| | |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| CTACTGCANG TACTGCTTCA GTGTAAGCGT ATTAGCTGTT ATCTACTCAG CTTTTCAACT 540 CTTCAAAAGA GTTTGTGACA TCGCTTATAG AGGTGTCTTG ATCTCCGATA AGACCTCTGA 68176 |||||||||| || ||||||| |||||||||| |||||||| | |||||||||| |||||||||| CTTCAAAAGA GTGTGTGACA TCGCTTATAG AGGTGTCTAG ATCTCCGATA AGACCTCTGA 600 CTATCTCAGT TTCATACTCG 68196 |||||||||| |||||||||| CTATCTCAGT TTCATACTCG 620 hqPGS_C08HBa0235H18.1+_SGN-E304411+ (67577 68196) ******************************************************************************** EST sequence 86 +strand 844 n (File: SGN-E538742+) 1 TTTTTTTTTT TTTTTTTAGG CCAAGAAGAT AATAACAGTG TAATGTATAA AATTATAAAT 61 ACTATCAAAC ACTGGCAGCT CCATATAACC AAAATACTAA ACCTTCCTTG ATGAACAAAG 121 AAGTAATTTC AGTTTAAAAC CTACAGTTAT CTCATATTCA ACATTAGGAA CATCAATTCA 181 CATAGTACTT ACGATATCTA TTTATTTATA CCCAGCAAAT CTTGAAAATC ATTCGTCTCA 241 GATGGCTTAC ATATATTCGT TCACCATACC ATCAGATATT CAGATCAAAT GTAGACTGCT 301 CGGCACATTC TAAAGTCGGC ACATTCTTTA GAAGGCAAAA TCTCATCTGA ATTGGCATGT 361 TTAATGGCAA GCAACAACAT TTCAGCTCTC ACCACTAGTA AACAAATTTC AGTTGTCTTT 421 AGTGATTTGT CTAGTTAAAA CTTGACAGAA GCAAGTGCTA TGCAGTTTAA TCTTCTATAA 481 TGACAAGATT TCCCTCAGAA AATTCACATG CCTCGATAGA GAGGGAAAGT TGCTTCTGTA 541 GCTTTTTTAC CACAAAGACT TCTGACTCTT CACATATGGT TACTACCGTG CCCTTGCGAC 601 CAAGCCTGCC CGTACGACCA GCTCGATGAG CATAATGAAC CGAGTCAGTA GGTAACCCCA 661 GATTAACTAC AAGATCACAT TCAGGTAAAT CCAAGCCTCT AGCTGAAAGC TCATTCGTTA 721 GCAGCACTCT AATCTCCCCA TTTCTGAACT TCTTTAAGAT TGTTGATCTC ACAAGTTTGC 781 TAAGATCACC ATGTAATTCT GCAGCATTCA TACCACGAGC TTCTAGTTTG AAGACAGCAT 841 CTTT Predicted gene structure (within gDNA segment 68406 to 70594): Exon 1 69142 69984 ( 843 n); cDNA 2 844 ( 843 n); score: 0.992 MATCH C08HBa0235H18.1+ SGN-E538742+ 0.992 843 0.999 C PGS_C08HBa0235H18.1+_SGN-E538742+ (69142 69984) Alignment (genomic DNA sequence = upper lines): TTTTACTGCT TCACTTAGGC CAAGAAGATA ATAACAGTGT AATGTATAAA ATTATAAATA 69201 |||| | | | |||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTTTTTTT TTTTTTAGGC CAAGAAGATA ATAACAGTGT AATGTATAAA ATTATAAATA 61 CTATCAAACA CTGGCAGCTC CATATAACCA AAATACTAAA CCTTCCTTGA TGAACAAAGA 69261 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTATCAAACA CTGGCAGCTC CATATAACCA AAATACTAAA CCTTCCTTGA TGAACAAAGA 121 AGTAATTTCA GTTTAAAACC TACAGTTATC TCATATTCAA CATTAGGAAC ATCAATTCAC 69321 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTAATTTCA GTTTAAAACC TACAGTTATC TCATATTCAA CATTAGGAAC ATCAATTCAC 181 ATAGTACTTA CGATATCTAT TTATTTATAC CCAGCAAATC TTGAAAATCA TTCGTCTCAG 69381 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGTACTTA CGATATCTAT TTATTTATAC CCAGCAAATC TTGAAAATCA TTCGTCTCAG 241 ATGGCTTACA TATATTCGTT CACCATACCA TCAGATATTC AGATCAAATG TAGACTGCTC 69441 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGCTTACA TATATTCGTT CACCATACCA TCAGATATTC AGATCAAATG TAGACTGCTC 301 GGCACATTCT AAAGTCGGCA CATTCTTTAG AAGGCAAAAT CTCATCTGAA TTGGCATGTT 69501 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCACATTCT AAAGTCGGCA CATTCTTTAG AAGGCAAAAT CTCATCTGAA TTGGCATGTT 361 TAATGGCAAG CAACAACATT TCAGCTCTCA CCACTAGTAA ACAAATTTCA GTTGTCTTTA 69561 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATGGCAAG CAACAACATT TCAGCTCTCA CCACTAGTAA ACAAATTTCA GTTGTCTTTA 421 GTGATTTGTC TAGTTAAAAC TTGACAGAAG CAAGTGCTAT GCAGTTTAAT CTTCTATAAT 69621 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGATTTGTC TAGTTAAAAC TTGACAGAAG CAAGTGCTAT GCAGTTTAAT CTTCTATAAT 481 GACAAGATTT CCCTCAGAAA ATTCACATGC CTCGATAGAG AGGGAAAGTT GCTTCTGTAG 69681 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACAAGATTT CCCTCAGAAA ATTCACATGC CTCGATAGAG AGGGAAAGTT GCTTCTGTAG 541 CTTTTTTACC ACAAAGACTT CTGACTCTTC ACATATGGTT ACTACCGTGC CCTTGCGACC 69741 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTTTTACC ACAAAGACTT CTGACTCTTC ACATATGGTT ACTACCGTGC CCTTGCGACC 601 AAGCCTGCCC GTACGACCAG CTCGATGAGC ATAATGAACC GAGTCAGTAG GTAACCCCAG 69801 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGCCTGCCC GTACGACCAG CTCGATGAGC ATAATGAACC GAGTCAGTAG GTAACCCCAG 661 ATTAACTACA AGATCACATT CAGGTAAATC CAAGCCTCTA GCTGAAAGCT CATTCGTTAG 69861 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAACTACA AGATCACATT CAGGTAAATC CAAGCCTCTA GCTGAAAGCT CATTCGTTAG 721 CAGCACTCTA ATCTCCCCAT TTCTGAACTT CTTTAAGATT GTTGATCTCA CAAGTTTGCT 69921 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGCACTCTA ATCTCCCCAT TTCTGAACTT CTTTAAGATT GTTGATCTCA CAAGTTTGCT 781 AAGATCACCA TGTAATTCTG CAGCATTCAT ACCACGAGCT TCTAGTTTGA AGACAGCATC 69981 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGATCACCA TGTAATTCTG CAGCATTCAT ACCACGAGCT TCTAGTTTGA AGACAGCATC 841 TTT 69984 ||| TTT 844 hqPGS_C08HBa0235H18.1+_SGN-E538742+ (69142 69984) ******************************************************************************** EST sequence 28 +strand 824 n (File: SGN-E537427+) 1 TTTCTTTTTT TTTTTTTAGG CCAAGAAGAT AATAACAGTG TAATGTATAA AATTATAAAT 61 ACTATCAAAC ACTGGCAGCT CCATATAACC AAAATACTAA ACCTTCCTTG ATGAACAAAG 121 AAGTAATTTC AGTTTAAAAC CTACAGTTAT CTCATATTCA ACATTAGGAA CATCAATTCA 181 CATAGTACTT ACGATATCTA TTTATTTATA CCCAGCAAAT CTTGAAAATC ATTCGTCTCA 241 GATGGCTTAC ATATATTCGT TCACCATACC ATCAGATATT CAGATCAAAT GTAGACTGCT 301 CGGCACATTC TAAAGTCGGC ACATTCTTTA GAAGGCAAAA TCTCATCTGA ATTGGCATGT 361 TTAATGGCAA GCAACAACAT TTCAGCTCTC ACCACTAGTA AACAAATTTC AGTTGTCTTT 421 AGTGATTTGT CTAGTTAAAA CTTGACAGAA GCAAGTGCTA TGCAGTTTAA TCTTCTATAA 481 TGACAAGATT TCCCTCAGAA AATTCACATG CCTCGATAGA GAGGGAAAGT TGCTTCTGTA 541 GCTTTTTTAC CACAAAGACT TCTGACTCTT CACATATGGT TACTACCGTG CCCTTGCGAC 601 CAAGCCTGCC CGTACGACCA GCTCGATGAG CATAATGAAC CGAGTCAGTA GGTAACCCCA 661 GATTAACTAC AAGATCACAT TCAGGTAAAT CCAAGCCTCT AGCTGAAAGC TCATTCGTTA 721 GCAGCACTCT AATCTCCCCA TTTCTGAACT TCTTTAAGAT TGTTGATCTC ACAAGTTTGC 781 TAAGATCACC ATGTAATTCT GCAGCATTCA TACCACGAGC TTCT Predicted gene structure (within gDNA segment 68406 to 70574): Exon 1 69142 69964 ( 823 n); cDNA 2 824 ( 823 n); score: 0.990 MATCH C08HBa0235H18.1+ SGN-E537427+ 0.990 823 0.999 C PGS_C08HBa0235H18.1+_SGN-E537427+ (69142 69964) Alignment (genomic DNA sequence = upper lines): TTTTACTGCT TCACTTAGGC CAAGAAGATA ATAACAGTGT AATGTATAAA ATTATAAATA 69201 || | | | | |||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTTTTTT TTTTTTAGGC CAAGAAGATA ATAACAGTGT AATGTATAAA ATTATAAATA 61 CTATCAAACA CTGGCAGCTC CATATAACCA AAATACTAAA CCTTCCTTGA TGAACAAAGA 69261 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTATCAAACA CTGGCAGCTC CATATAACCA AAATACTAAA CCTTCCTTGA TGAACAAAGA 121 AGTAATTTCA GTTTAAAACC TACAGTTATC TCATATTCAA CATTAGGAAC ATCAATTCAC 69321 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTAATTTCA GTTTAAAACC TACAGTTATC TCATATTCAA CATTAGGAAC ATCAATTCAC 181 ATAGTACTTA CGATATCTAT TTATTTATAC CCAGCAAATC TTGAAAATCA TTCGTCTCAG 69381 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGTACTTA CGATATCTAT TTATTTATAC CCAGCAAATC TTGAAAATCA TTCGTCTCAG 241 ATGGCTTACA TATATTCGTT CACCATACCA TCAGATATTC AGATCAAATG TAGACTGCTC 69441 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGCTTACA TATATTCGTT CACCATACCA TCAGATATTC AGATCAAATG TAGACTGCTC 301 GGCACATTCT AAAGTCGGCA CATTCTTTAG AAGGCAAAAT CTCATCTGAA TTGGCATGTT 69501 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCACATTCT AAAGTCGGCA CATTCTTTAG AAGGCAAAAT CTCATCTGAA TTGGCATGTT 361 TAATGGCAAG CAACAACATT TCAGCTCTCA CCACTAGTAA ACAAATTTCA GTTGTCTTTA 69561 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATGGCAAG CAACAACATT TCAGCTCTCA CCACTAGTAA ACAAATTTCA GTTGTCTTTA 421 GTGATTTGTC TAGTTAAAAC TTGACAGAAG CAAGTGCTAT GCAGTTTAAT CTTCTATAAT 69621 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGATTTGTC TAGTTAAAAC TTGACAGAAG CAAGTGCTAT GCAGTTTAAT CTTCTATAAT 481 GACAAGATTT CCCTCAGAAA ATTCACATGC CTCGATAGAG AGGGAAAGTT GCTTCTGTAG 69681 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACAAGATTT CCCTCAGAAA ATTCACATGC CTCGATAGAG AGGGAAAGTT GCTTCTGTAG 541 CTTTTTTACC ACAAAGACTT CTGACTCTTC ACATATGGTT ACTACCGTGC CCTTGCGACC 69741 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTTTTACC ACAAAGACTT CTGACTCTTC ACATATGGTT ACTACCGTGC CCTTGCGACC 601 AAGCCTGCCC GTACGACCAG CTCGATGAGC ATAATGAACC GAGTCAGTAG GTAACCCCAG 69801 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGCCTGCCC GTACGACCAG CTCGATGAGC ATAATGAACC GAGTCAGTAG GTAACCCCAG 661 ATTAACTACA AGATCACATT CAGGTAAATC CAAGCCTCTA GCTGAAAGCT CATTCGTTAG 69861 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAACTACA AGATCACATT CAGGTAAATC CAAGCCTCTA GCTGAAAGCT CATTCGTTAG 721 CAGCACTCTA ATCTCCCCAT TTCTGAACTT CTTTAAGATT GTTGATCTCA CAAGTTTGCT 69921 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGCACTCTA ATCTCCCCAT TTCTGAACTT CTTTAAGATT GTTGATCTCA CAAGTTTGCT 781 AAGATCACCA TGTAATTCTG CAGCATTCAT ACCACGAGCT TCT 69964 |||||||||| |||||||||| |||||||||| |||||||||| ||| AAGATCACCA TGTAATTCTG CAGCATTCAT ACCACGAGCT TCT 824 hqPGS_C08HBa0235H18.1+_SGN-E537427+ (69142 69964) ******************************************************************************** EST sequence 30 +strand 749 n (File: SGN-E537466+) 1 TTTCTTTTTT TTTTTTTAGG CCAAGAAGAT AATAACAGTG TAATGTATAA AATTATAAAT 61 ACTATCAAAC ACTGGCAGCT CCATATAACC AAAATACTAA ACCTTCCTTG ATGAACAAAG 121 AAGTAATTTC AGTTTAAAAC CTACAGTTAT CTCATATTCA ACATTAGGAA CATCAATTCA 181 CATAGTACTT ACGATATCTA TTTATTTATA CCCAGCAAAT CTTGAAAATC ATTCGTCTCA 241 GATGGCTTAC ATATATTCGT TCACCATACC ATCAGATATT CAGATCAAAT GTAGACTGCT 301 CGGCACATTC TAAAGTCGGC ACATTCTTTA GAAGGCAAAA TCTCATCTGA ATTGGCATGT 361 TTAATGGCAA GCAACAACAT TTCAGCTCTC ACCACTAGTA AACAAATTTC AGTTGTCTTT 421 AGTGATTTGT CTAGTTAAAA CTTGACAGAA GCAAGTGCTA TGCAGTTTAA TCTTCTATAA 481 TGACAAGATT TCCCTCAGAA AATTCACATG CCTCGATAGA GAGGGAAAGT TGCTTCTGTA 541 GCTTTTTTAC CACAAAGACT TCTGACTCTT CACATATGGT TACTACCGTG CCCTTGCGAC 601 CAAGCCTGCC CGTACGACCA GCTCGATGAG CATAATGAAC CGAGTCAGTA GGTAACCCCA 661 GATTAACTAC AAGATCACAT TCAGGTAAAT CCAAGCCTCT AGCTGAAAGC TCATTCGTTA 721 GCAGCACTCT AATCTCCCCA TTTCTGAAC Predicted gene structure (within gDNA segment 68406 to 70499): Exon 1 69142 69889 ( 748 n); cDNA 2 749 ( 748 n); score: 0.989 MATCH C08HBa0235H18.1+ SGN-E537466+ 0.989 748 0.999 C PGS_C08HBa0235H18.1+_SGN-E537466+ (69142 69889) Alignment (genomic DNA sequence = upper lines): TTTTACTGCT TCACTTAGGC CAAGAAGATA ATAACAGTGT AATGTATAAA ATTATAAATA 69201 || | | | | |||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTTTTTT TTTTTTAGGC CAAGAAGATA ATAACAGTGT AATGTATAAA ATTATAAATA 61 CTATCAAACA CTGGCAGCTC CATATAACCA AAATACTAAA CCTTCCTTGA TGAACAAAGA 69261 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTATCAAACA CTGGCAGCTC CATATAACCA AAATACTAAA CCTTCCTTGA TGAACAAAGA 121 AGTAATTTCA GTTTAAAACC TACAGTTATC TCATATTCAA CATTAGGAAC ATCAATTCAC 69321 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTAATTTCA GTTTAAAACC TACAGTTATC TCATATTCAA CATTAGGAAC ATCAATTCAC 181 ATAGTACTTA CGATATCTAT TTATTTATAC CCAGCAAATC TTGAAAATCA TTCGTCTCAG 69381 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGTACTTA CGATATCTAT TTATTTATAC CCAGCAAATC TTGAAAATCA TTCGTCTCAG 241 ATGGCTTACA TATATTCGTT CACCATACCA TCAGATATTC AGATCAAATG TAGACTGCTC 69441 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGCTTACA TATATTCGTT CACCATACCA TCAGATATTC AGATCAAATG TAGACTGCTC 301 GGCACATTCT AAAGTCGGCA CATTCTTTAG AAGGCAAAAT CTCATCTGAA TTGGCATGTT 69501 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCACATTCT AAAGTCGGCA CATTCTTTAG AAGGCAAAAT CTCATCTGAA TTGGCATGTT 361 TAATGGCAAG CAACAACATT TCAGCTCTCA CCACTAGTAA ACAAATTTCA GTTGTCTTTA 69561 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATGGCAAG CAACAACATT TCAGCTCTCA CCACTAGTAA ACAAATTTCA GTTGTCTTTA 421 GTGATTTGTC TAGTTAAAAC TTGACAGAAG CAAGTGCTAT GCAGTTTAAT CTTCTATAAT 69621 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGATTTGTC TAGTTAAAAC TTGACAGAAG CAAGTGCTAT GCAGTTTAAT CTTCTATAAT 481 GACAAGATTT CCCTCAGAAA ATTCACATGC CTCGATAGAG AGGGAAAGTT GCTTCTGTAG 69681 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACAAGATTT CCCTCAGAAA ATTCACATGC CTCGATAGAG AGGGAAAGTT GCTTCTGTAG 541 CTTTTTTACC ACAAAGACTT CTGACTCTTC ACATATGGTT ACTACCGTGC CCTTGCGACC 69741 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTTTTACC ACAAAGACTT CTGACTCTTC ACATATGGTT ACTACCGTGC CCTTGCGACC 601 AAGCCTGCCC GTACGACCAG CTCGATGAGC ATAATGAACC GAGTCAGTAG GTAACCCCAG 69801 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGCCTGCCC GTACGACCAG CTCGATGAGC ATAATGAACC GAGTCAGTAG GTAACCCCAG 661 ATTAACTACA AGATCACATT CAGGTAAATC CAAGCCTCTA GCTGAAAGCT CATTCGTTAG 69861 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAACTACA AGATCACATT CAGGTAAATC CAAGCCTCTA GCTGAAAGCT CATTCGTTAG 721 CAGCACTCTA ATCTCCCCAT TTCTGAAC 69889 |||||||||| |||||||||| |||||||| CAGCACTCTA ATCTCCCCAT TTCTGAAC 749 hqPGS_C08HBa0235H18.1+_SGN-E537466+ (69142 69889) ******************************************************************************** EST sequence 29 +strand 173 n (File: SGN-E547890+) 1 AAAATTATAA ATACTATCAA ACACTGGCAG CTCCATATAA CCAAAATACT AAACCTTCCT 61 TGATGAACAA AGAAGTAATT TCAGTTTAAA ACCTACAGTT ATCTCATATT CAACATTAGG 121 AACATCAATT CACATATTAC TTACGATATT TTTTTTTTTA TACCCAGCAA ATC Predicted gene structure (within gDNA segment 68589 to 70304): Exon 1 69189 69361 ( 173 n); cDNA 1 173 ( 173 n); score: 0.977 MATCH C08HBa0235H18.1+ SGN-E547890+ 0.977 173 1.000 C PGS_C08HBa0235H18.1+_SGN-E547890+ (69189 69361) Alignment (genomic DNA sequence = upper lines): AAAATTATAA ATACTATCAA ACACTGGCAG CTCCATATAA CCAAAATACT AAACCTTCCT 69248 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAATTATAA ATACTATCAA ACACTGGCAG CTCCATATAA CCAAAATACT AAACCTTCCT 60 TGATGAACAA AGAAGTAATT TCAGTTTAAA ACCTACAGTT ATCTCATATT CAACATTAGG 69308 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATGAACAA AGAAGTAATT TCAGTTTAAA ACCTACAGTT ATCTCATATT CAACATTAGG 120 AACATCAATT CACATAGTAC TTACGATATC TATTTATTTA TACCCAGCAA ATC 69361 |||||||||| |||||| ||| ||||||||| | ||| |||| |||||||||| ||| AACATCAATT CACATATTAC TTACGATATT TTTTTTTTTA TACCCAGCAA ATC 173 hqPGS_C08HBa0235H18.1+_SGN-E547890+ (69189 69361) ******************************************************************************** EST sequence 430 +strand 810 n (File: SGN-E546587+) 1 TTTTTTTTTC AATACTATAA AACACTGGCG GTTCCATATA ACCAAAATAC TCAACCTTCC 61 TTGATGAACA AAGAAGTAAG TTCAGTTAAA AACCTACAGT TTTAGGAACA TCAATTCACA 121 TAGTACTTGC AATATCTATT TATTTATACC CAGCAAATCT TGAAAAACAT TCGTCTCAGA 181 TGGCTTACAT ATATTCGTTC ACCATACCAT CAGATATTCA GATCAAATGT AGACTGCTCG 241 GCACATTCTA CAGTCAGCAC ATTCTTTAGA AGGCAAAATC TCATCTGAAT TGGCATGTTT 301 AATGGCTAGC AACAACATTT CAGCTCTCAC CATTAGTAAA CAAATTTCAG TTGTCTTTAG 361 TGATTTGTCT AGTTAAAACT TGACTATGCA GTTTAATCTT CTATAATGAC AAGATTTCCC 421 TCAGAAAATT CACATGCCTC GATAGAGAGG GAAAGTTGCT TCTGTAGCTT TTTTACCACA 481 AAGACTTCTG ACTCTTCACA TATGGTTACT ACCGTGCCCT TGCGGCCAAG CCTGCCCGTA 541 CGACCAGCTC GATGAGCATA ATGAACCGAG TCAGTAGGTA ACCCCAGATT AACTACAAGA 601 TCACATTCAG GTAAATCCAA GCCTCTAGCT GAAAGCTCAT TCGTTAGCAG CACCCTAATC 661 TCCCCATTTC TGAACTTCTT TAAGATTGTT GATCTCACAA GTTTGCTAAG ATCACCATGT 721 AATTCTGCAG CATTCATACC ACGAGCTTCT AGTTTGAAGA CAGCATCTTT TAGCTGGTTT 781 GGTGTGGTTC ATAAAAGCTA TTACACATTT Predicted gene structure (within gDNA segment 68300 to 70633): Exon 1 69193 70023 ( 831 n); cDNA 6 810 ( 805 n); score: 0.943 MATCH C08HBa0235H18.1+ SGN-E546587+ 0.943 831 1.026 C PGS_C08HBa0235H18.1+_SGN-E546587+ (69193 70023) Alignment (genomic DNA sequence = upper lines): TTATAAATAC TATCAAACAC TGGCAGCTCC ATATAACCAA AATACTAAAC CTTCCTTGAT 69252 || | ||||| ||| |||||| |||| | ||| |||||||||| |||||| ||| |||||||||| TTTTCAATAC TATAAAACAC TGGCGGTTCC ATATAACCAA AATACTCAAC CTTCCTTGAT 65 GAACAAAGAA GTAATTTCAG TTTAAAACCT ACAGTTATCT CATATTCAAC ATTAGGAACA 69312 |||||||||| |||| ||||| || ||||||| |||||| | | | |||||| GAACAAAGAA GTAAGTTCAG TTAAAAACCT ACAGTT-T-T -A-------- ----GGAACA 110 TCAATTCACA TAGTACTTAC GATATCTATT TATTTATACC CAGCAAATCT TGAAAATCAT 69372 |||||||||| |||||||| | ||||||||| |||||||||| |||||||||| |||||| ||| TCAATTCACA TAGTACTTGC AATATCTATT TATTTATACC CAGCAAATCT TGAAAAACAT 170 TCGTCTCAGA TGGCTTACAT ATATTCGTTC ACCATACCAT CAGATATTCA GATCAAATGT 69432 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGTCTCAGA TGGCTTACAT ATATTCGTTC ACCATACCAT CAGATATTCA GATCAAATGT 230 AGACTGCTCG GCACATTCTA AAGTCGGCAC ATTCTTTAGA AGGCAAAATC TCATCTGAAT 69492 |||||||||| |||||||||| |||| |||| |||||||||| |||||||||| |||||||||| AGACTGCTCG GCACATTCTA CAGTCAGCAC ATTCTTTAGA AGGCAAAATC TCATCTGAAT 290 TGGCATGTTT AATGGCAAGC AACAACATTT CAGCTCTCAC CACTAGTAAA CAAATTTCAG 69552 |||||||||| |||||| ||| |||||||||| |||||||||| || ||||||| |||||||||| TGGCATGTTT AATGGCTAGC AACAACATTT CAGCTCTCAC CATTAGTAAA CAAATTTCAG 350 TTGTCTTTAG TGATTTGTCT AGTTAAAACT TGACAGAAGC AAGTGCTATG CAGTTTAATC 69612 |||||||||| |||||||||| |||||||||| | | | ||||| |||||||||| TTGTCTTTAG TGATTTGTCT AGTTAAAACT T-------G- -A---CTATG CAGTTTAATC 398 TTCTATAATG ACAAGATTTC CCTCAGAAAA TTCACATGCC TCGATAGAGA GGGAAAGTTG 69672 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTATAATG ACAAGATTTC CCTCAGAAAA TTCACATGCC TCGATAGAGA GGGAAAGTTG 458 CTTCTGTAGC TTTTTTACCA CAAAGACTTC TGACTCTTCA CATATGGTTA CTACCGTGCC 69732 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTCTGTAGC TTTTTTACCA CAAAGACTTC TGACTCTTCA CATATGGTTA CTACCGTGCC 518 CTTGCGACCA AGCCTGCCCG TACGACCAGC TCGATGAGCA TAATGAACCG AGTCAGTAGG 69792 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGCGGCCA AGCCTGCCCG TACGACCAGC TCGATGAGCA TAATGAACCG AGTCAGTAGG 578 TAACCCCAGA TTAACTACAA GATCACATTC AGGTAAATCC AAGCCTCTAG CTGAAAGCTC 69852 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAACCCCAGA TTAACTACAA GATCACATTC AGGTAAATCC AAGCCTCTAG CTGAAAGCTC 638 ATTCGTTAGC AGCACTCTAA TCTCCCCATT TCTGAACTTC TTTAAGATTG TTGATCTCAC 69912 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| ATTCGTTAGC AGCACCCTAA TCTCCCCATT TCTGAACTTC TTTAAGATTG TTGATCTCAC 698 AAGTTTGCTA AGATCACCAT GTAATTCTGC AGCATTCATA CCACGAGCTT CTAGTTTGAA 69972 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTTTGCTA AGATCACCAT GTAATTCTGC AGCATTCATA CCACGAGCTT CTAGTTTGAA 758 GACAGCATCT TTTAGCT-GT TTTGTGTGGT TCATAAAAGC TATTACACAT TT 70023 |||||||||| ||||||| || || ||||||| |||||||||| |||||||||| || GACAGCATCT TTTAGCTGGT TTGGTGTGGT TCATAAAAGC TATTACACAT TT 810 hqPGS_C08HBa0235H18.1+_SGN-E546587+ (69193 70023) ******************************************************************************** EST sequence 685 -strand 723 n (File: SGN-E540084-) 1 CAGCCAAGAC CTGGGTTGCA TCAGTGCACC CAACATGGGC AACTTTCCAC ATGGTCCAGT 61 ATCTGCCATC GTAGTATCCT GGTGACTTAT GGTTCTCACG GTACACAAAT CCGTGCTCAG 121 TCTCGAATTC CAAGCAAGGA ACCCATCCAT TTTTCAATAG GTACTCAATT TCGCTGAGCA 181 ATTGCTCGTC GGACAAATCA GGAAGGTACG ACAGAGTCTC GTACTTCTTC ATGTTAATTG 241 GTGGCCACAC CTGCATGCAA CTGACTCTTC CACCGTTGCT AGCAATGGAG GTAATGTCAA 301 GGTTTTGCTT CCTTGAAACA GGGAAAGAAG CAGTGGACTT GAGTCCAGTG AAGGGTGCAA 361 CCATGCTAGC TTGTGCACCA TTGCCGCGGG TGGCAACAGC AGCTGAACAC TGGCAGCTCC 421 ATATAACCAA AATACTAAAC CTTCCTTGAT GAACAAAGAA GTAATTTCAG TTTAAAACCT 481 ACAGTTATCT CATATTCAAC ATTAGGAACA TCAATTCACA TAGTACTTAC GATATCTATT 541 TATTTATACC CAGCAAATCT TGAAAATCAT TCGTCTCAGA TGGCTTACAT ATATTCGTTC 601 ACCATACCAT CAGATATTCA GATCAAATGT AGACTGCTCG GCACATTCTA AAGTCGGCAC 661 ATTCTTTAGA AGGCAAAATC TCATCTGAAT TGGCATGTTT AATGGCAAGC AACAACATTT 721 CAG Predicted gene structure (within gDNA segment 63948 to 70125): Exon 1 65058 65064 ( 7 n); cDNA 389 395 ( 7 n); score: 0.714 Intron 1 65065 66386 (1322 n); Pd: 0.000 (s: 0), Pa: 0.970 (s: 0) Exon 2 66387 66396 ( 10 n); cDNA 396 405 ( 10 n); score: 0.500 Intron 2 66397 69207 (2811 n); Pd: 0.900 (s: 0), Pa: 0.000 (s: 1.00) Exon 3 69208 69525 ( 318 n); cDNA 406 723 ( 318 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E540084- 1.000 335 0.463 C PGS_C08HBa0235H18.1+_SGN-E540084- (65058 65064,66387 66396,69208 69525) Alignment (genomic DNA sequence = upper lines): GGTGATATTA GAAACAGAGA TGACTTGGAG AAGCTATTTT CTAAGAAAGA GTATGAAAAT 65117 |||| | GGTGGCA... .......... .......... .......... .......... .......... 395 TTTCTTGTTT TCAAATTATC TCCTGCTGTT ATTATTTCCT TTGAATGCAT TTCTATGGTG 65177 .......... .......... .......... .......... .......... .......... 395 TGTTGTGATA TTCATTGTTT TGTTATATAT ATTGAAATAG GTTTGCTGCT GTGGTCCATT 65237 .......... .......... .......... .......... .......... .......... 395 TTGCTGGGCT TAAGGCTGTT GGAGAGAGTG TTGTTCAGCC CTTCCTTTAC TTTGAGAACA 65297 .......... .......... .......... .......... .......... .......... 395 ATCTGATTGG ATCAATAACT TTGTATTCAG TCATGGCCAA GTATAATTGT AAGAAGGTAC 65357 .......... .......... .......... .......... .......... .......... 395 GTCTTTCGAT ATAATTTTGG TTTCATATAA GTGAAATATG CTATGCATTC AGGGCAAGTT 65417 .......... .......... .......... .......... .......... .......... 395 GGAATCTGTT ATGTTCATGA TTGCTGCTAC CCTTATAGTT TTGGTAGAAT TTGAAGGCTA 65477 .......... .......... .......... .......... .......... .......... 395 ATAGTAAACA TGGTTCTTCT TTCAAGAACT CATTTAGCCT CAAGAACATG GGCGTTGCTA 65537 .......... .......... .......... .......... .......... .......... 395 GGGGGCGGAA GGAGGTTCAG TTGTTCATGG TGTGGCGAAC TGTTGGATTC GTAGGAGGGT 65597 .......... .......... .......... .......... .......... .......... 395 ATTGAGTAGG TTGGTCAGGT TGATAACTTT TTAATTTCAT TGTGTGAAAT TGCAGTTGGT 65657 .......... .......... .......... .......... .......... .......... 395 TTTTTCATCA TCTGCAACAG TTTATGGTCA GCCTGAAAAG GTTCCCTGTG TGGAGGATTT 65717 .......... .......... .......... .......... .......... .......... 395 TGAATTGAAG GCTATGAATC CTTATGGTCG AACAAAGGTT TGTATTGTCA ATAATTGTCT 65777 .......... .......... .......... .......... .......... .......... 395 CTTAATTTCA TACTGATTAG AGATAGTTCA TTTGATAGTA TCTCAGTCTG TAAACTATGT 65837 .......... .......... .......... .......... .......... .......... 395 GACCGAACCT GTGTTTTGTT CTATTTAATT AGCTATTTCT TGAAGATATT GCACGGGATA 65897 .......... .......... .......... .......... .......... .......... 395 TCCAGAAGGC TGATCAAGAA TGGAATATCA TACTGTTGAG GTATTTCAAC CCGGTAGGAG 65957 .......... .......... .......... .......... .......... .......... 395 CTCATGAAAG TGGCAAACTC GGGGAAGATC CAAAGGGCAT TCCGAACAAT CTTATGCCTT 66017 .......... .......... .......... .......... .......... .......... 395 ACATTCAGCA AGTAGCTGTT GGTAGATTGC CGGAGTTGAA TGTATATGGC AACGACTACC 66077 .......... .......... .......... .......... .......... .......... 395 CTACACCTGA TGGTACCGCG GTAGGTTATG TTTGGCTGAT TCTTTGTGAC TGTAGCTTCT 66137 .......... .......... .......... .......... .......... .......... 395 TTGTATGAGG AAAAAAAAGA AACTGAATGA CTCAACATAC CATCTGTGAC TAGAGTACAT 66197 .......... .......... .......... .......... .......... .......... 395 ACGAAAGAAA CAGAAAATGA AGAGCGAGCA GAAGTTAACA GCCGGAACAA CTTATTGAAC 66257 .......... .......... .......... .......... .......... .......... 395 TACTAATAAT GAAGAGAAAA GACAGAAATA TAGTTGAATA TCCAAATATA CTCATGACAT 66317 .......... .......... .......... .......... .......... .......... 395 GAATCACCTT TAACATATTT TGCTTCTTGT ACTTGACTGT TAAATGATCT TTAATCTATT 66377 .......... .......... .......... .......... .......... .......... 395 TCTCACTAGA TACGAGATTA TATCCATGTT ATGGATTTGG CGGACGGTCA TGTTGTTGCA 66437 | | || | .........A CAGCAGCTG. .......... .......... .......... .......... 405 CTTCAGAGAC TTCTAAGGCA GAATCACATA GGTAAGTAAT CCTTTTCAAA GCAAAGTTTA 66497 .......... .......... .......... .......... .......... .......... 405 GATCTGAATT CTTTTGACGT TAGTTCGAGC TAATGATACC CTTTTGTATG ATTTTGACAT 66557 .......... .......... .......... .......... .......... .......... 405 TTCATATATT TCGGTTGAAG GTAACATCTT GTGACATTTG TTCTTCTGTT TAATGGTTTG 66617 .......... .......... .......... .......... .......... .......... 405 CATTAGGTTG TGTTGCCTAC AATTTGGGTA CTGGAAAAGG CAAATCTGTC CTAGAGATGG 66677 .......... .......... .......... .......... .......... .......... 405 TTGGTGCCTT TGAAAAGGCG TCTGGAAAGG TCTCTTAACG GAACACGCTA AACCATACTT 66737 .......... .......... .......... .......... .......... .......... 405 AGTAGAATTT GAACAAAGCA ACAATCTCAT ATTATGTTGT ACTAATATAT TATTTTTGTT 66797 .......... .......... .......... .......... .......... .......... 405 CCAGAAAATC CCGCTTAAAA TGTGTCCAAG AAGACCAGGA GATGCCACTG CTGTTTACGC 66857 .......... .......... .......... .......... .......... .......... 405 ATCTACTGAA AAAGCTGAGA AGGAGCTCGG TTGGAAGTAA GTAGTAAATG GTTATTTTTC 66917 .......... .......... .......... .......... .......... .......... 405 TATTCTTGGA TCAACTGATG CTTGTGCCTA GCAGCCTCAT AAAGGCTAAT CTTCTTGCAT 66977 .......... .......... .......... .......... .......... .......... 405 CTCATTCATT TCACCAGTTG AAAGAGAAAC TGATGGTGGG ATCAAATCTT TTCTACTTCT 67037 .......... .......... .......... .......... .......... .......... 405 TTTCAGGGCA AAATATGGGA TAAATGAGAT GTGCAGGGAC CAGTGGAAAT GGGCAAGCCA 67097 .......... .......... .......... .......... .......... .......... 405 AAATCCTTGG GGTTACCAAC CAAAGCCTTG ATATGTTATA ATAATAATAA TAATAATACA 67157 .......... .......... .......... .......... .......... .......... 405 AGTAGCACTT GGAGTACAAA ACTGTAGTCA ACATCCTAGT ACTTTACATT TCATGCAAAC 67217 .......... .......... .......... .......... .......... .......... 405 ATTAGATGTA TCCAAGGACA AAAGTGTTCA TCCATAATAG TTGTTGATGG TTATGTACTA 67277 .......... .......... .......... .......... .......... .......... 405 CTAAACCCTG TTGTTGTCTC CCTTAAAGGT TTTATGGGAA CTTGAATGTT CATCCTATTA 67337 .......... .......... .......... .......... .......... .......... 405 TGATCCCTTC AACCAAATCT CTTTACTGAT TGTAATTCAT TCAAAAAGAG TAAATGATCT 67397 .......... .......... .......... .......... .......... .......... 405 AGTCTACTAT GCTATTGAAG GTGTTCAATT CTATACTTCA TTGTTGATGA AGTTATGGTT 67457 .......... .......... .......... .......... .......... .......... 405 TATATTTGAC TCAAACATAT CTTTTAGCTC AGAATAGTTG ACTTTTTTCA CCTACTTACA 67517 .......... .......... .......... .......... .......... .......... 405 TTTAAATTTA GTAGTGGTTA ACCAACTATT CTGTCCTTTG GACAAGACTT ATTACCAGCT 67577 .......... .......... .......... .......... .......... .......... 405 AATTAGTTAT CTCTATGCAA ATTTGCTCAA TTGGCTGCAA AAGTATCCCA GACTTTTTGG 67637 .......... .......... .......... .......... .......... .......... 405 TCAAATTGTT CTTTTGAGAG TAATCATTTG CTAACAGTTG AGGAAAGGAG AGAACTATGA 67697 .......... .......... .......... .......... .......... .......... 405 AAGAAGAAGG TAATGTGATG GTGACTGCTC AGACAATCAT ATCTGGTGCT TCTCCTTCTC 67757 .......... .......... .......... .......... .......... .......... 405 CTACATTAAC TCCACAACCA CCTTTGCCAA CACCATCACC ATATTCGTTC TCAGTGGCAT 67817 .......... .......... .......... .......... .......... .......... 405 CGACAAGGTT GAGATCAAGG CCTTCTATAT ATGCATATGA TCTTGCCCTA AGATCACTGG 67877 .......... .......... .......... .......... .......... .......... 405 CACTTCTGTT CTCTTTCATA TCTGCTCTTT CACTAGCTGT ACCATCACCA ACAAGGACAA 67937 .......... .......... .......... .......... .......... .......... 405 AACGAGGAAC GATTTCAAAA TTCTGTGATT ACCCACAATT AACGTAAGAA TCAACACAGG 67997 .......... .......... .......... .......... .......... .......... 405 ATTTCAGGAT TTAAACTAAG ACAACATTCA GTTCTATGGT TTTGAGAGCT GTTTTTACAC 68057 .......... .......... .......... .......... .......... .......... 405 TACTGCAGGT ACTGCTTCAG TGTAAGCGTA TTAGCTTTTA TCTACTCAGC TTTTCAACTC 68117 .......... .......... .......... .......... .......... .......... 405 TTCAAAAGAG TTTGTGACAT CGCTTATAGA GGTGTCTTGA TCTCCGATAA GACCTCTGAC 68177 .......... .......... .......... .......... .......... .......... 405 TATCTCAGTT TCATACTCGA TCAGGTATAT ACTAACTTTA ATAAGCTAGA GATTACTTCC 68237 .......... .......... .......... .......... .......... .......... 405 GAGTCCAAAA CCTAAAGGAA GCTGGCTCAC TGTTTCACAT GTAACTACGA CCATAAAATG 68297 .......... .......... .......... .......... .......... .......... 405 GTTGCATCCC TACCTTTAGT TCAAACTAGT AGCAAGAATT TACTCTCTCA CTTGGGATTT 68357 .......... .......... .......... .......... .......... .......... 405 CGCCTGATGT ATCATCAACA TCTACGCTCT ATTATCCACT AACAGTGAAA CTTTATGTTG 68417 .......... .......... .......... .......... .......... .......... 405 AACAATAATG GCAAGAAACA GAAATCATCT TATAGGAAGA AACAAAGAGT AGAAGCATCT 68477 .......... .......... .......... .......... .......... .......... 405 TATTTGAATA TCAAGCATCC TAAATTTCAT TTCTTCTGAA TGCTTCTCTC TAGTTCTCCT 68537 .......... .......... .......... .......... .......... .......... 405 TTTCATTTAC TGCAGATAAA TATTTCTAAA CAACGAATTC TCATAAGCAG AATGTTTTAC 68597 .......... .......... .......... .......... .......... .......... 405 AGTTGACAGG TTACCTCCTC GTGTCCTCTT CTTCAGTAAC TATACCAGTC ATTCAAGAGA 68657 .......... .......... .......... .......... .......... .......... 405 TGGATATCCA AGCCTCTCTC TGGAAGGCAG CTATTCTTGC TGTTTGCATG TCATTTGCTG 68717 .......... .......... .......... .......... .......... .......... 405 CTTTCATGGT CCTTGCAGTG TCTGCACTTT TATCAGGCTA CAAGCTGTGC AAAAGGATCA 68777 .......... .......... .......... .......... .......... .......... 405 TATGGTGATG GACTGGGAAT TGAACGTGCA GCCTTCAACT CCAGGATTGA CAAAGCAATC 68837 .......... .......... .......... .......... .......... .......... 405 GTAGTGTAAA ATGGGACATG ATTTCTTCGA TCTGCTTGAA GCATCACAAG AAGCAATTGG 68897 .......... .......... .......... .......... .......... .......... 405 GTGGCAGATA CCAAATATCC TCTACTACAC TAATGGTCTG GTAGAAGTTG ATAACAGTAA 68957 .......... .......... .......... .......... .......... .......... 405 GAAGAGGGTT TCAGAAGTTT ATAGCAAAGA ATAGAAATAT TTTTGGAGGA AAATATCCAT 69017 .......... .......... .......... .......... .......... .......... 405 ATACACTATG AATTGTTGTC CCACCGCCAT GGTGAATGAA CAGTATTAAG TAGTAACAAA 69077 .......... .......... .......... .......... .......... .......... 405 CTAGTTTGAA CTTCCTTGCT TCGAAGTATA ACAAAAACTT ACAGTTCTTT TTCTACAGAT 69137 .......... .......... .......... .......... .......... .......... 405 AATGTTTTAC TGCTTCACTT AGGCCAAGAA GATAATAACA GTGTAATGTA TAAAATTATA 69197 .......... .......... .......... .......... .......... .......... 405 AATACTATCA AACACTGGCA GCTCCATATA ACCAAAATAC TAAACCTTCC TTGATGAACA 69257 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| .......... AACACTGGCA GCTCCATATA ACCAAAATAC TAAACCTTCC TTGATGAACA 455 AAGAAGTAAT TTCAGTTTAA AACCTACAGT TATCTCATAT TCAACATTAG GAACATCAAT 69317 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGAAGTAAT TTCAGTTTAA AACCTACAGT TATCTCATAT TCAACATTAG GAACATCAAT 515 TCACATAGTA CTTACGATAT CTATTTATTT ATACCCAGCA AATCTTGAAA ATCATTCGTC 69377 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACATAGTA CTTACGATAT CTATTTATTT ATACCCAGCA AATCTTGAAA ATCATTCGTC 575 TCAGATGGCT TACATATATT CGTTCACCAT ACCATCAGAT ATTCAGATCA AATGTAGACT 69437 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAGATGGCT TACATATATT CGTTCACCAT ACCATCAGAT ATTCAGATCA AATGTAGACT 635 GCTCGGCACA TTCTAAAGTC GGCACATTCT TTAGAAGGCA AAATCTCATC TGAATTGGCA 69497 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTCGGCACA TTCTAAAGTC GGCACATTCT TTAGAAGGCA AAATCTCATC TGAATTGGCA 695 TGTTTAATGG CAAGCAACAA CATTTCAG 69525 |||||||||| |||||||||| |||||||| TGTTTAATGG CAAGCAACAA CATTTCAG 723 hqPGS_C08HBa0235H18.1+_SGN-E540084- (69208 69525) ******************************************************************************** EST sequence 757 -strand 613 n (File: SGN-E285474-) 1 ATCCGTGCTC AGTCTCGAAT TCCAAGCAAG GAACCCATCC ATTTTTCAAT AGGTACTCAA 61 TTTCGCTGAG CAATTGCTCG TCGGACAAAT CAGGAAGGTA CGACAGAGTC TCGTACTTCT 121 TCATGTTAAT TGGTGGCCAC ACCTGCATGC AACTGACTCT TCCACCGTTG CTAGCAATGG 181 AGGTAATGTC AAGGTTTTGC TTCCTTGAAA CAGGGAAAGA AGCAGTGGAC TTGAGTCCAG 241 TGAAGGGTGC AACCATGCTA GCTTGTGCAC CATTGCCGCG GGTGGCAACA GCAGCTGAAC 301 ACTGGCAGCT CCATATAACC AAAATACTAA ACCTTCCTTG ATGAACAAAG AAGTAATTTC 361 AGTTTAAAAC CTACAGTTAT CTCATATTCA ACATTAGGAA CATCAATTCA CATAGTACTT 421 ACGATATCTA TTTATTTATA CCCAGCAAAT CTTGAAAATC ATTCGTCTCA GATGGCTTAC 481 ATATATTCGT TCACCATACC ATCAGATATT CAGATCAAAT GTAGACTGCT CGGCACATTC 541 TAAAGTCGGC ACATTCTTTA GAAGGCAAAA TCTCATCTGA ATTGGCATGT TACAGGCAAG 601 CAACAACATT TCA Predicted gene structure (within gDNA segment 65628 to 70321): Exon 1 66392 66396 ( 5 n); cDNA 293 297 ( 5 n); score: 0.600 Intron 1 66397 69207 (2811 n); Pd: 0.900 (s: 0), Pa: 0.000 (s: 1.00) Exon 2 69208 69524 ( 317 n); cDNA 298 613 ( 316 n); score: 0.991 MATCH C08HBa0235H18.1+ SGN-E285474- 0.991 322 0.525 C PGS_C08HBa0235H18.1+_SGN-E285474- (66392 66396,69208 69524) Alignment (genomic DNA sequence = upper lines): AGATTATATC CATGTTATGG ATTTGGCGGA CGGTCATGTT GTTGCACTTC AGAGACTTCT 66451 || | AGCTG..... .......... .......... .......... .......... .......... 297 AAGGCAGAAT CACATAGGTA AGTAATCCTT TTCAAAGCAA AGTTTAGATC TGAATTCTTT 66511 .......... .......... .......... .......... .......... .......... 297 TGACGTTAGT TCGAGCTAAT GATACCCTTT TGTATGATTT TGACATTTCA TATATTTCGG 66571 .......... .......... .......... .......... .......... .......... 297 TTGAAGGTAA CATCTTGTGA CATTTGTTCT TCTGTTTAAT GGTTTGCATT AGGTTGTGTT 66631 .......... .......... .......... .......... .......... .......... 297 GCCTACAATT TGGGTACTGG AAAAGGCAAA TCTGTCCTAG AGATGGTTGG TGCCTTTGAA 66691 .......... .......... .......... .......... .......... .......... 297 AAGGCGTCTG GAAAGGTCTC TTAACGGAAC ACGCTAAACC ATACTTAGTA GAATTTGAAC 66751 .......... .......... .......... .......... .......... .......... 297 AAAGCAACAA TCTCATATTA TGTTGTACTA ATATATTATT TTTGTTCCAG AAAATCCCGC 66811 .......... .......... .......... .......... .......... .......... 297 TTAAAATGTG TCCAAGAAGA CCAGGAGATG CCACTGCTGT TTACGCATCT ACTGAAAAAG 66871 .......... .......... .......... .......... .......... .......... 297 CTGAGAAGGA GCTCGGTTGG AAGTAAGTAG TAAATGGTTA TTTTTCTATT CTTGGATCAA 66931 .......... .......... .......... .......... .......... .......... 297 CTGATGCTTG TGCCTAGCAG CCTCATAAAG GCTAATCTTC TTGCATCTCA TTCATTTCAC 66991 .......... .......... .......... .......... .......... .......... 297 CAGTTGAAAG AGAAACTGAT GGTGGGATCA AATCTTTTCT ACTTCTTTTC AGGGCAAAAT 67051 .......... .......... .......... .......... .......... .......... 297 ATGGGATAAA TGAGATGTGC AGGGACCAGT GGAAATGGGC AAGCCAAAAT CCTTGGGGTT 67111 .......... .......... .......... .......... .......... .......... 297 ACCAACCAAA GCCTTGATAT GTTATAATAA TAATAATAAT AATACAAGTA GCACTTGGAG 67171 .......... .......... .......... .......... .......... .......... 297 TACAAAACTG TAGTCAACAT CCTAGTACTT TACATTTCAT GCAAACATTA GATGTATCCA 67231 .......... .......... .......... .......... .......... .......... 297 AGGACAAAAG TGTTCATCCA TAATAGTTGT TGATGGTTAT GTACTACTAA ACCCTGTTGT 67291 .......... .......... .......... .......... .......... .......... 297 TGTCTCCCTT AAAGGTTTTA TGGGAACTTG AATGTTCATC CTATTATGAT CCCTTCAACC 67351 .......... .......... .......... .......... .......... .......... 297 AAATCTCTTT ACTGATTGTA ATTCATTCAA AAAGAGTAAA TGATCTAGTC TACTATGCTA 67411 .......... .......... .......... .......... .......... .......... 297 TTGAAGGTGT TCAATTCTAT ACTTCATTGT TGATGAAGTT ATGGTTTATA TTTGACTCAA 67471 .......... .......... .......... .......... .......... .......... 297 ACATATCTTT TAGCTCAGAA TAGTTGACTT TTTTCACCTA CTTACATTTA AATTTAGTAG 67531 .......... .......... .......... .......... .......... .......... 297 TGGTTAACCA ACTATTCTGT CCTTTGGACA AGACTTATTA CCAGCTAATT AGTTATCTCT 67591 .......... .......... .......... .......... .......... .......... 297 ATGCAAATTT GCTCAATTGG CTGCAAAAGT ATCCCAGACT TTTTGGTCAA ATTGTTCTTT 67651 .......... .......... .......... .......... .......... .......... 297 TGAGAGTAAT CATTTGCTAA CAGTTGAGGA AAGGAGAGAA CTATGAAAGA AGAAGGTAAT 67711 .......... .......... .......... .......... .......... .......... 297 GTGATGGTGA CTGCTCAGAC AATCATATCT GGTGCTTCTC CTTCTCCTAC ATTAACTCCA 67771 .......... .......... .......... .......... .......... .......... 297 CAACCACCTT TGCCAACACC ATCACCATAT TCGTTCTCAG TGGCATCGAC AAGGTTGAGA 67831 .......... .......... .......... .......... .......... .......... 297 TCAAGGCCTT CTATATATGC ATATGATCTT GCCCTAAGAT CACTGGCACT TCTGTTCTCT 67891 .......... .......... .......... .......... .......... .......... 297 TTCATATCTG CTCTTTCACT AGCTGTACCA TCACCAACAA GGACAAAACG AGGAACGATT 67951 .......... .......... .......... .......... .......... .......... 297 TCAAAATTCT GTGATTACCC ACAATTAACG TAAGAATCAA CACAGGATTT CAGGATTTAA 68011 .......... .......... .......... .......... .......... .......... 297 ACTAAGACAA CATTCAGTTC TATGGTTTTG AGAGCTGTTT TTACACTACT GCAGGTACTG 68071 .......... .......... .......... .......... .......... .......... 297 CTTCAGTGTA AGCGTATTAG CTTTTATCTA CTCAGCTTTT CAACTCTTCA AAAGAGTTTG 68131 .......... .......... .......... .......... .......... .......... 297 TGACATCGCT TATAGAGGTG TCTTGATCTC CGATAAGACC TCTGACTATC TCAGTTTCAT 68191 .......... .......... .......... .......... .......... .......... 297 ACTCGATCAG GTATATACTA ACTTTAATAA GCTAGAGATT ACTTCCGAGT CCAAAACCTA 68251 .......... .......... .......... .......... .......... .......... 297 AAGGAAGCTG GCTCACTGTT TCACATGTAA CTACGACCAT AAAATGGTTG CATCCCTACC 68311 .......... .......... .......... .......... .......... .......... 297 TTTAGTTCAA ACTAGTAGCA AGAATTTACT CTCTCACTTG GGATTTCGCC TGATGTATCA 68371 .......... .......... .......... .......... .......... .......... 297 TCAACATCTA CGCTCTATTA TCCACTAACA GTGAAACTTT ATGTTGAACA ATAATGGCAA 68431 .......... .......... .......... .......... .......... .......... 297 GAAACAGAAA TCATCTTATA GGAAGAAACA AAGAGTAGAA GCATCTTATT TGAATATCAA 68491 .......... .......... .......... .......... .......... .......... 297 GCATCCTAAA TTTCATTTCT TCTGAATGCT TCTCTCTAGT TCTCCTTTTC ATTTACTGCA 68551 .......... .......... .......... .......... .......... .......... 297 GATAAATATT TCTAAACAAC GAATTCTCAT AAGCAGAATG TTTTACAGTT GACAGGTTAC 68611 .......... .......... .......... .......... .......... .......... 297 CTCCTCGTGT CCTCTTCTTC AGTAACTATA CCAGTCATTC AAGAGATGGA TATCCAAGCC 68671 .......... .......... .......... .......... .......... .......... 297 TCTCTCTGGA AGGCAGCTAT TCTTGCTGTT TGCATGTCAT TTGCTGCTTT CATGGTCCTT 68731 .......... .......... .......... .......... .......... .......... 297 GCAGTGTCTG CACTTTTATC AGGCTACAAG CTGTGCAAAA GGATCATATG GTGATGGACT 68791 .......... .......... .......... .......... .......... .......... 297 GGGAATTGAA CGTGCAGCCT TCAACTCCAG GATTGACAAA GCAATCGTAG TGTAAAATGG 68851 .......... .......... .......... .......... .......... .......... 297 GACATGATTT CTTCGATCTG CTTGAAGCAT CACAAGAAGC AATTGGGTGG CAGATACCAA 68911 .......... .......... .......... .......... .......... .......... 297 ATATCCTCTA CTACACTAAT GGTCTGGTAG AAGTTGATAA CAGTAAGAAG AGGGTTTCAG 68971 .......... .......... .......... .......... .......... .......... 297 AAGTTTATAG CAAAGAATAG AAATATTTTT GGAGGAAAAT ATCCATATAC ACTATGAATT 69031 .......... .......... .......... .......... .......... .......... 297 GTTGTCCCAC CGCCATGGTG AATGAACAGT ATTAAGTAGT AACAAACTAG TTTGAACTTC 69091 .......... .......... .......... .......... .......... .......... 297 CTTGCTTCGA AGTATAACAA AAACTTACAG TTCTTTTTCT ACAGATAATG TTTTACTGCT 69151 .......... .......... .......... .......... .......... .......... 297 TCACTTAGGC CAAGAAGATA ATAACAGTGT AATGTATAAA ATTATAAATA CTATCAAACA 69211 |||| .......... .......... .......... .......... .......... ......AACA 301 CTGGCAGCTC CATATAACCA AAATACTAAA CCTTCCTTGA TGAACAAAGA AGTAATTTCA 69271 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGGCAGCTC CATATAACCA AAATACTAAA CCTTCCTTGA TGAACAAAGA AGTAATTTCA 361 GTTTAAAACC TACAGTTATC TCATATTCAA CATTAGGAAC ATCAATTCAC ATAGTACTTA 69331 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTAAAACC TACAGTTATC TCATATTCAA CATTAGGAAC ATCAATTCAC ATAGTACTTA 421 CGATATCTAT TTATTTATAC CCAGCAAATC TTGAAAATCA TTCGTCTCAG ATGGCTTACA 69391 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGATATCTAT TTATTTATAC CCAGCAAATC TTGAAAATCA TTCGTCTCAG ATGGCTTACA 481 TATATTCGTT CACCATACCA TCAGATATTC AGATCAAATG TAGACTGCTC GGCACATTCT 69451 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATATTCGTT CACCATACCA TCAGATATTC AGATCAAATG TAGACTGCTC GGCACATTCT 541 AAAGTCGGCA CATTCTTTAG AAGGCAAAAT CTCATCTGAA TTGGCATGTT TAATGGCAAG 69511 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | || |||||| AAAGTCGGCA CATTCTTTAG AAGGCAAAAT CTCATCTGAA TTGGCATG-T TACAGGCAAG 600 CAACAACATT TCA 69524 |||||||||| ||| CAACAACATT TCA 613 hqPGS_C08HBa0235H18.1+_SGN-E285474- (69208 69524) ******************************************************************************** EST sequence 161 +strand 823 n (File: SGN-E540081+) 1 TTTTTTTTTT TGAAGGGAAC ACAACAAAGT AAAATTACTA CAGTTTCTCC AGAGAAAAAC 61 TTTAAGGAGG ATTCAAACAA GCTTCCCCTA AATACATAGG GTCAGTTATA CATTACATAA 121 TTAAAAATTG GCATTTTAGT ATCCTTCGGG CTTGTAAGCG ATGAAACTGA TGCACTGCAC 181 TTGACGAACA TTGTCGAATC CGATGATACG GACCCATGCC TGAGGGTAAG CCTTCTTTGC 241 CTCCTGCACC TCAGCCAAGA CCTGGGTTGC ATCAGTGCAC CCAAACATGG GCAACTTCCA 301 CATGGTCCAG TATCTGCCAT CGTAGTATCC TGGTGACTTA TGGTTCTCAC GGTACACAAA 361 TCCGTGCTCA GTCTCGAATT CCAAGCAAGG AACCCATCCA TTTTTCAATA GGTACTCAAT 421 TTCGCTGAGC AATTGCTCGT CGGACAAATC AGGAAGGTAC GACAGAGTCT CGTACTTCTT 481 CATGTTAATT GGTGGCCACA CCTGCATGCA ACTGACTCTT CCACCGTTGC TAGCAATGGA 541 GGTAATGTCA AGGTTTTGCT TCCTTGAAAC AGGGAAAGAA GCAGTGGACT TGAGTCCAGT 601 GAAGGGTGCA ACCATGCTAG CTTGTGCACC ATTGCCGCGG GTGGCAACAG CAGCTGAACA 661 CTGGCAGCTC CATATAACCA AAATACTAAA CCTTCCTTGA TGAACAAAGA AGTAATTTCA 721 GTTTAAAACC TACAGTTATC TCATATTCAA CATTAGGAAC ATCAATTCAC ATAGTACTTA 781 CGATATCTAT TTATTTATAC CCAGCAAATC TTGAAAATCA TTC Predicted gene structure (within gDNA segment 62048 to 69984): Exon 1 65058 65064 ( 7 n); cDNA 640 646 ( 7 n); score: 0.714 Intron 1 65065 66386 (1322 n); Pd: 0.000 (s: 0), Pa: 0.970 (s: 0) Exon 2 66387 66396 ( 10 n); cDNA 647 656 ( 10 n); score: 0.500 Intron 2 66397 69207 (2811 n); Pd: 0.900 (s: 0), Pa: 0.000 (s: 1.00) Exon 3 69208 69374 ( 167 n); cDNA 657 823 ( 167 n); score: 1.000 PPA cDNA 11 1 MATCH C08HBa0235H18.1+ SGN-E540081+ 1.000 184 0.224 C PGS_C08HBa0235H18.1+_SGN-E540081+ (65058 65064,66387 66396,69208 69374) Alignment (genomic DNA sequence = upper lines): GGTGATATTA GAAACAGAGA TGACTTGGAG AAGCTATTTT CTAAGAAAGA GTATGAAAAT 65117 |||| | GGTGGCA... .......... .......... .......... .......... .......... 646 TTTCTTGTTT TCAAATTATC TCCTGCTGTT ATTATTTCCT TTGAATGCAT TTCTATGGTG 65177 .......... .......... .......... .......... .......... .......... 646 TGTTGTGATA TTCATTGTTT TGTTATATAT ATTGAAATAG GTTTGCTGCT GTGGTCCATT 65237 .......... .......... .......... .......... .......... .......... 646 TTGCTGGGCT TAAGGCTGTT GGAGAGAGTG TTGTTCAGCC CTTCCTTTAC TTTGAGAACA 65297 .......... .......... .......... .......... .......... .......... 646 ATCTGATTGG ATCAATAACT TTGTATTCAG TCATGGCCAA GTATAATTGT AAGAAGGTAC 65357 .......... .......... .......... .......... .......... .......... 646 GTCTTTCGAT ATAATTTTGG TTTCATATAA GTGAAATATG CTATGCATTC AGGGCAAGTT 65417 .......... .......... .......... .......... .......... .......... 646 GGAATCTGTT ATGTTCATGA TTGCTGCTAC CCTTATAGTT TTGGTAGAAT TTGAAGGCTA 65477 .......... .......... .......... .......... .......... .......... 646 ATAGTAAACA TGGTTCTTCT TTCAAGAACT CATTTAGCCT CAAGAACATG GGCGTTGCTA 65537 .......... .......... .......... .......... .......... .......... 646 GGGGGCGGAA GGAGGTTCAG TTGTTCATGG TGTGGCGAAC TGTTGGATTC GTAGGAGGGT 65597 .......... .......... .......... .......... .......... .......... 646 ATTGAGTAGG TTGGTCAGGT TGATAACTTT TTAATTTCAT TGTGTGAAAT TGCAGTTGGT 65657 .......... .......... .......... .......... .......... .......... 646 TTTTTCATCA TCTGCAACAG TTTATGGTCA GCCTGAAAAG GTTCCCTGTG TGGAGGATTT 65717 .......... .......... .......... .......... .......... .......... 646 TGAATTGAAG GCTATGAATC CTTATGGTCG AACAAAGGTT TGTATTGTCA ATAATTGTCT 65777 .......... .......... .......... .......... .......... .......... 646 CTTAATTTCA TACTGATTAG AGATAGTTCA TTTGATAGTA TCTCAGTCTG TAAACTATGT 65837 .......... .......... .......... .......... .......... .......... 646 GACCGAACCT GTGTTTTGTT CTATTTAATT AGCTATTTCT TGAAGATATT GCACGGGATA 65897 .......... .......... .......... .......... .......... .......... 646 TCCAGAAGGC TGATCAAGAA TGGAATATCA TACTGTTGAG GTATTTCAAC CCGGTAGGAG 65957 .......... .......... .......... .......... .......... .......... 646 CTCATGAAAG TGGCAAACTC GGGGAAGATC CAAAGGGCAT TCCGAACAAT CTTATGCCTT 66017 .......... .......... .......... .......... .......... .......... 646 ACATTCAGCA AGTAGCTGTT GGTAGATTGC CGGAGTTGAA TGTATATGGC AACGACTACC 66077 .......... .......... .......... .......... .......... .......... 646 CTACACCTGA TGGTACCGCG GTAGGTTATG TTTGGCTGAT TCTTTGTGAC TGTAGCTTCT 66137 .......... .......... .......... .......... .......... .......... 646 TTGTATGAGG AAAAAAAAGA AACTGAATGA CTCAACATAC CATCTGTGAC TAGAGTACAT 66197 .......... .......... .......... .......... .......... .......... 646 ACGAAAGAAA CAGAAAATGA AGAGCGAGCA GAAGTTAACA GCCGGAACAA CTTATTGAAC 66257 .......... .......... .......... .......... .......... .......... 646 TACTAATAAT GAAGAGAAAA GACAGAAATA TAGTTGAATA TCCAAATATA CTCATGACAT 66317 .......... .......... .......... .......... .......... .......... 646 GAATCACCTT TAACATATTT TGCTTCTTGT ACTTGACTGT TAAATGATCT TTAATCTATT 66377 .......... .......... .......... .......... .......... .......... 646 TCTCACTAGA TACGAGATTA TATCCATGTT ATGGATTTGG CGGACGGTCA TGTTGTTGCA 66437 | | || | .........A CAGCAGCTG. .......... .......... .......... .......... 656 CTTCAGAGAC TTCTAAGGCA GAATCACATA GGTAAGTAAT CCTTTTCAAA GCAAAGTTTA 66497 .......... .......... .......... .......... .......... .......... 656 GATCTGAATT CTTTTGACGT TAGTTCGAGC TAATGATACC CTTTTGTATG ATTTTGACAT 66557 .......... .......... .......... .......... .......... .......... 656 TTCATATATT TCGGTTGAAG GTAACATCTT GTGACATTTG TTCTTCTGTT TAATGGTTTG 66617 .......... .......... .......... .......... .......... .......... 656 CATTAGGTTG TGTTGCCTAC AATTTGGGTA CTGGAAAAGG CAAATCTGTC CTAGAGATGG 66677 .......... .......... .......... .......... .......... .......... 656 TTGGTGCCTT TGAAAAGGCG TCTGGAAAGG TCTCTTAACG GAACACGCTA AACCATACTT 66737 .......... .......... .......... .......... .......... .......... 656 AGTAGAATTT GAACAAAGCA ACAATCTCAT ATTATGTTGT ACTAATATAT TATTTTTGTT 66797 .......... .......... .......... .......... .......... .......... 656 CCAGAAAATC CCGCTTAAAA TGTGTCCAAG AAGACCAGGA GATGCCACTG CTGTTTACGC 66857 .......... .......... .......... .......... .......... .......... 656 ATCTACTGAA AAAGCTGAGA AGGAGCTCGG TTGGAAGTAA GTAGTAAATG GTTATTTTTC 66917 .......... .......... .......... .......... .......... .......... 656 TATTCTTGGA TCAACTGATG CTTGTGCCTA GCAGCCTCAT AAAGGCTAAT CTTCTTGCAT 66977 .......... .......... .......... .......... .......... .......... 656 CTCATTCATT TCACCAGTTG AAAGAGAAAC TGATGGTGGG ATCAAATCTT TTCTACTTCT 67037 .......... .......... .......... .......... .......... .......... 656 TTTCAGGGCA AAATATGGGA TAAATGAGAT GTGCAGGGAC CAGTGGAAAT GGGCAAGCCA 67097 .......... .......... .......... .......... .......... .......... 656 AAATCCTTGG GGTTACCAAC CAAAGCCTTG ATATGTTATA ATAATAATAA TAATAATACA 67157 .......... .......... .......... .......... .......... .......... 656 AGTAGCACTT GGAGTACAAA ACTGTAGTCA ACATCCTAGT ACTTTACATT TCATGCAAAC 67217 .......... .......... .......... .......... .......... .......... 656 ATTAGATGTA TCCAAGGACA AAAGTGTTCA TCCATAATAG TTGTTGATGG TTATGTACTA 67277 .......... .......... .......... .......... .......... .......... 656 CTAAACCCTG TTGTTGTCTC CCTTAAAGGT TTTATGGGAA CTTGAATGTT CATCCTATTA 67337 .......... .......... .......... .......... .......... .......... 656 TGATCCCTTC AACCAAATCT CTTTACTGAT TGTAATTCAT TCAAAAAGAG TAAATGATCT 67397 .......... .......... .......... .......... .......... .......... 656 AGTCTACTAT GCTATTGAAG GTGTTCAATT CTATACTTCA TTGTTGATGA AGTTATGGTT 67457 .......... .......... .......... .......... .......... .......... 656 TATATTTGAC TCAAACATAT CTTTTAGCTC AGAATAGTTG ACTTTTTTCA CCTACTTACA 67517 .......... .......... .......... .......... .......... .......... 656 TTTAAATTTA GTAGTGGTTA ACCAACTATT CTGTCCTTTG GACAAGACTT ATTACCAGCT 67577 .......... .......... .......... .......... .......... .......... 656 AATTAGTTAT CTCTATGCAA ATTTGCTCAA TTGGCTGCAA AAGTATCCCA GACTTTTTGG 67637 .......... .......... .......... .......... .......... .......... 656 TCAAATTGTT CTTTTGAGAG TAATCATTTG CTAACAGTTG AGGAAAGGAG AGAACTATGA 67697 .......... .......... .......... .......... .......... .......... 656 AAGAAGAAGG TAATGTGATG GTGACTGCTC AGACAATCAT ATCTGGTGCT TCTCCTTCTC 67757 .......... .......... .......... .......... .......... .......... 656 CTACATTAAC TCCACAACCA CCTTTGCCAA CACCATCACC ATATTCGTTC TCAGTGGCAT 67817 .......... .......... .......... .......... .......... .......... 656 CGACAAGGTT GAGATCAAGG CCTTCTATAT ATGCATATGA TCTTGCCCTA AGATCACTGG 67877 .......... .......... .......... .......... .......... .......... 656 CACTTCTGTT CTCTTTCATA TCTGCTCTTT CACTAGCTGT ACCATCACCA ACAAGGACAA 67937 .......... .......... .......... .......... .......... .......... 656 AACGAGGAAC GATTTCAAAA TTCTGTGATT ACCCACAATT AACGTAAGAA TCAACACAGG 67997 .......... .......... .......... .......... .......... .......... 656 ATTTCAGGAT TTAAACTAAG ACAACATTCA GTTCTATGGT TTTGAGAGCT GTTTTTACAC 68057 .......... .......... .......... .......... .......... .......... 656 TACTGCAGGT ACTGCTTCAG TGTAAGCGTA TTAGCTTTTA TCTACTCAGC TTTTCAACTC 68117 .......... .......... .......... .......... .......... .......... 656 TTCAAAAGAG TTTGTGACAT CGCTTATAGA GGTGTCTTGA TCTCCGATAA GACCTCTGAC 68177 .......... .......... .......... .......... .......... .......... 656 TATCTCAGTT TCATACTCGA TCAGGTATAT ACTAACTTTA ATAAGCTAGA GATTACTTCC 68237 .......... .......... .......... .......... .......... .......... 656 GAGTCCAAAA CCTAAAGGAA GCTGGCTCAC TGTTTCACAT GTAACTACGA CCATAAAATG 68297 .......... .......... .......... .......... .......... .......... 656 GTTGCATCCC TACCTTTAGT TCAAACTAGT AGCAAGAATT TACTCTCTCA CTTGGGATTT 68357 .......... .......... .......... .......... .......... .......... 656 CGCCTGATGT ATCATCAACA TCTACGCTCT ATTATCCACT AACAGTGAAA CTTTATGTTG 68417 .......... .......... .......... .......... .......... .......... 656 AACAATAATG GCAAGAAACA GAAATCATCT TATAGGAAGA AACAAAGAGT AGAAGCATCT 68477 .......... .......... .......... .......... .......... .......... 656 TATTTGAATA TCAAGCATCC TAAATTTCAT TTCTTCTGAA TGCTTCTCTC TAGTTCTCCT 68537 .......... .......... .......... .......... .......... .......... 656 TTTCATTTAC TGCAGATAAA TATTTCTAAA CAACGAATTC TCATAAGCAG AATGTTTTAC 68597 .......... .......... .......... .......... .......... .......... 656 AGTTGACAGG TTACCTCCTC GTGTCCTCTT CTTCAGTAAC TATACCAGTC ATTCAAGAGA 68657 .......... .......... .......... .......... .......... .......... 656 TGGATATCCA AGCCTCTCTC TGGAAGGCAG CTATTCTTGC TGTTTGCATG TCATTTGCTG 68717 .......... .......... .......... .......... .......... .......... 656 CTTTCATGGT CCTTGCAGTG TCTGCACTTT TATCAGGCTA CAAGCTGTGC AAAAGGATCA 68777 .......... .......... .......... .......... .......... .......... 656 TATGGTGATG GACTGGGAAT TGAACGTGCA GCCTTCAACT CCAGGATTGA CAAAGCAATC 68837 .......... .......... .......... .......... .......... .......... 656 GTAGTGTAAA ATGGGACATG ATTTCTTCGA TCTGCTTGAA GCATCACAAG AAGCAATTGG 68897 .......... .......... .......... .......... .......... .......... 656 GTGGCAGATA CCAAATATCC TCTACTACAC TAATGGTCTG GTAGAAGTTG ATAACAGTAA 68957 .......... .......... .......... .......... .......... .......... 656 GAAGAGGGTT TCAGAAGTTT ATAGCAAAGA ATAGAAATAT TTTTGGAGGA AAATATCCAT 69017 .......... .......... .......... .......... .......... .......... 656 ATACACTATG AATTGTTGTC CCACCGCCAT GGTGAATGAA CAGTATTAAG TAGTAACAAA 69077 .......... .......... .......... .......... .......... .......... 656 CTAGTTTGAA CTTCCTTGCT TCGAAGTATA ACAAAAACTT ACAGTTCTTT TTCTACAGAT 69137 .......... .......... .......... .......... .......... .......... 656 AATGTTTTAC TGCTTCACTT AGGCCAAGAA GATAATAACA GTGTAATGTA TAAAATTATA 69197 .......... .......... .......... .......... .......... .......... 656 AATACTATCA AACACTGGCA GCTCCATATA ACCAAAATAC TAAACCTTCC TTGATGAACA 69257 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| .......... AACACTGGCA GCTCCATATA ACCAAAATAC TAAACCTTCC TTGATGAACA 706 AAGAAGTAAT TTCAGTTTAA AACCTACAGT TATCTCATAT TCAACATTAG GAACATCAAT 69317 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGAAGTAAT TTCAGTTTAA AACCTACAGT TATCTCATAT TCAACATTAG GAACATCAAT 766 TCACATAGTA CTTACGATAT CTATTTATTT ATACCCAGCA AATCTTGAAA ATCATTC 69374 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| TCACATAGTA CTTACGATAT CTATTTATTT ATACCCAGCA AATCTTGAAA ATCATTC 823 hqPGS_C08HBa0235H18.1+_SGN-E540081+ (69208 69374) ******************************************************************************** EST sequence 574 -strand 774 n (File: SGN-E538744-) 1 GAATTGGCAT GTTTAATGGC AAGCAACAAC ATTTCAGCTC TCACCACTAG TAAACAAATN 61 TCAGTTGTCT TTAGTGATTT GTCTAGTTAA AACTTGACAG AAGCAAGTGC TATGCAGTTT 121 AATCTTCTAT AATGACAAGA TTTCCCTCAG AAAATTCACA TGCCTCGATA GAGAGGGAAA 181 GTTGCTTCTG TAGCTTTTTT ACCACAAAGA CTTCTGACTC TTCACATATG GTTACTACCG 241 TGCCCTTGCG ACCAAGCCTG CCCGTACGAC CAGCTCGATG AGCATAATGA ACCGAGTCAG 301 TAGGTAACCC CAGATTAACT ACAAGATCAC ATTCAGGTAA ATCCAAGCCT CTAGCTGAAA 361 GCTCATTCGT TAGCAGCACT CTAATCTCCC CATTTCTGAA CTTCTTTAAG ATTGTTGATC 421 TCACAAGTTT GCTAAGATCA CCATGTAATT CTGCAGCATT CATACCACGA GCTTCTAGTT 481 TGAAGACAGC ATCTTTTAGC TGTTTTGTGT GGTTCATAAA AGCTATTACA CATTTGGCAT 541 CCAGAGCGTG CACACACCTT CTTAACATAT CAACTTTGTG CTGTATCCTA GTAATAGTGT 601 AATAATGCTG CAAATTAGGG GGTAAGCTCT GAACATCAGG CATAGGTTGT ACACTTGAGC 661 TTGAATCAGT AGTAGAAGGT GTTCCCGGTA TATTAACAGA TCCAGAAGGA GTGACAGACT 721 CGAGTGGAAC AACTTTATTG GCTTGGATGA GAAGTGGATC ACAACCCCAA CTTC Predicted gene structure (within gDNA segment 68879 to 70862): Exon 1 69489 70262 ( 774 n); cDNA 1 774 ( 774 n); score: 0.999 MATCH C08HBa0235H18.1+ SGN-E538744- 0.999 774 1.000 C PGS_C08HBa0235H18.1+_SGN-E538744- (69489 70262) Alignment (genomic DNA sequence = upper lines): GAATTGGCAT GTTTAATGGC AAGCAACAAC ATTTCAGCTC TCACCACTAG TAAACAAATT 69548 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| GAATTGGCAT GTTTAATGGC AAGCAACAAC ATTTCAGCTC TCACCACTAG TAAACAAATN 60 TCAGTTGTCT TTAGTGATTT GTCTAGTTAA AACTTGACAG AAGCAAGTGC TATGCAGTTT 69608 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAGTTGTCT TTAGTGATTT GTCTAGTTAA AACTTGACAG AAGCAAGTGC TATGCAGTTT 120 AATCTTCTAT AATGACAAGA TTTCCCTCAG AAAATTCACA TGCCTCGATA GAGAGGGAAA 69668 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATCTTCTAT AATGACAAGA TTTCCCTCAG AAAATTCACA TGCCTCGATA GAGAGGGAAA 180 GTTGCTTCTG TAGCTTTTTT ACCACAAAGA CTTCTGACTC TTCACATATG GTTACTACCG 69728 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGCTTCTG TAGCTTTTTT ACCACAAAGA CTTCTGACTC TTCACATATG GTTACTACCG 240 TGCCCTTGCG ACCAAGCCTG CCCGTACGAC CAGCTCGATG AGCATAATGA ACCGAGTCAG 69788 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCCCTTGCG ACCAAGCCTG CCCGTACGAC CAGCTCGATG AGCATAATGA ACCGAGTCAG 300 TAGGTAACCC CAGATTAACT ACAAGATCAC ATTCAGGTAA ATCCAAGCCT CTAGCTGAAA 69848 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGGTAACCC CAGATTAACT ACAAGATCAC ATTCAGGTAA ATCCAAGCCT CTAGCTGAAA 360 GCTCATTCGT TAGCAGCACT CTAATCTCCC CATTTCTGAA CTTCTTTAAG ATTGTTGATC 69908 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTCATTCGT TAGCAGCACT CTAATCTCCC CATTTCTGAA CTTCTTTAAG ATTGTTGATC 420 TCACAAGTTT GCTAAGATCA CCATGTAATT CTGCAGCATT CATACCACGA GCTTCTAGTT 69968 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACAAGTTT GCTAAGATCA CCATGTAATT CTGCAGCATT CATACCACGA GCTTCTAGTT 480 TGAAGACAGC ATCTTTTAGC TGTTTTGTGT GGTTCATAAA AGCTATTACA CATTTGGCAT 70028 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAGACAGC ATCTTTTAGC TGTTTTGTGT GGTTCATAAA AGCTATTACA CATTTGGCAT 540 CCAGAGCGTG CACACACCTT CTTAACATAT CAACTTTGTG CTGTATCCTA GTAATAGTGT 70088 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAGAGCGTG CACACACCTT CTTAACATAT CAACTTTGTG CTGTATCCTA GTAATAGTGT 600 AATAATGCTG CAAATTAGGG GGTAAGCTCT GAACATCAGG CATAGGTTGT ACACTTGAGC 70148 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATAATGCTG CAAATTAGGG GGTAAGCTCT GAACATCAGG CATAGGTTGT ACACTTGAGC 660 TTGAATCAGT AGTAGAAGGT GTTCCCGGTA TATTAACAGA TCCAGAAGGA GTGACAGACT 70208 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGAATCAGT AGTAGAAGGT GTTCCCGGTA TATTAACAGA TCCAGAAGGA GTGACAGACT 720 CGAGTGGAAC AACTTTATTG GCTTGGATGA GAAGTGGATC ACAACCCCAA CTTC 70262 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| CGAGTGGAAC AACTTTATTG GCTTGGATGA GAAGTGGATC ACAACCCCAA CTTC 774 hqPGS_C08HBa0235H18.1+_SGN-E538744- (69489 70262) ******************************************************************************** EST sequence 487 -strand 767 n (File: SGN-E537429-) 1 CATGTTAAAT GGCAAGCAAC AACATTTCAG CTCTCACCAC TAGTAAACAA ATTTCAGTTG 61 TCTTTAGTGA TTTGTCTAGT TAAAACTTGA CAGAAGCAAG TGCTATGCAG TTTAATCTTC 121 TATAATGACA AGATTTCCCT CAGAAAATTC ACATGCCTCG ATAGAGAGGG AAAGTTGCTT 181 CTGTAGCTTT TTTACCACAA AGACTTCTGA CTCTTCACAT ATGGTTACTA CCGTGCCCTT 241 GCGACCAAGC CTGCCCGTAC GACCAGCTCG ATGAGCATAA TGAACCGAGT CAGTAGGTAA 301 CCCCAGATTA ACTACAAGAT CACATTCAGG TAAATCCAAG CCTCTAGCTG AAAGCTCATT 361 CGTTAGCAGC ACTCTAATCT CCCCATTTCT GAACTTCTTT AAGATTGTTG ATCTCACAAG 421 TTTGCTAAGA TCACCATGTA ATTCTGCAGC ATTCATACCA CGAGCTTCTA GTTTGAAGAC 481 AGCATCTTTT AGCTGTTTTG TGTGGTTCAT AAAAGCTATT ACACATTTGG CATCCAGAGC 541 GTGCACACAC CTTCTTAACA TATCAACTTT GTGCTGTATC CTAGTAATAG TGTAATAATG 601 CTGCAAATTA GGGGGTAAGC TCTGAACATC AGGCATAGGT TGTACACTTG AGCTTGAATC 661 AGTAGTAGAA GGTGTTCCCG GTATATTAAC AGATCCAGAA GGAGTGACAG ACTCGAGTGG 721 AACAACTTTA TTGGCTTGGA TGAGAAGTGG ATCACAACCC CAACTTC Predicted gene structure (within gDNA segment 68823 to 70862): Exon 1 69496 70262 ( 767 n); cDNA 1 767 ( 767 n); score: 0.999 MATCH C08HBa0235H18.1+ SGN-E537429- 0.999 767 1.000 C PGS_C08HBa0235H18.1+_SGN-E537429- (69496 70262) Alignment (genomic DNA sequence = upper lines): CATGTTTAAT GGCAAGCAAC AACATTTCAG CTCTCACCAC TAGTAAACAA ATTTCAGTTG 69555 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGTTAAAT GGCAAGCAAC AACATTTCAG CTCTCACCAC TAGTAAACAA ATTTCAGTTG 60 TCTTTAGTGA TTTGTCTAGT TAAAACTTGA CAGAAGCAAG TGCTATGCAG TTTAATCTTC 69615 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTTAGTGA TTTGTCTAGT TAAAACTTGA CAGAAGCAAG TGCTATGCAG TTTAATCTTC 120 TATAATGACA AGATTTCCCT CAGAAAATTC ACATGCCTCG ATAGAGAGGG AAAGTTGCTT 69675 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATAATGACA AGATTTCCCT CAGAAAATTC ACATGCCTCG ATAGAGAGGG AAAGTTGCTT 180 CTGTAGCTTT TTTACCACAA AGACTTCTGA CTCTTCACAT ATGGTTACTA CCGTGCCCTT 69735 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTAGCTTT TTTACCACAA AGACTTCTGA CTCTTCACAT ATGGTTACTA CCGTGCCCTT 240 GCGACCAAGC CTGCCCGTAC GACCAGCTCG ATGAGCATAA TGAACCGAGT CAGTAGGTAA 69795 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGACCAAGC CTGCCCGTAC GACCAGCTCG ATGAGCATAA TGAACCGAGT CAGTAGGTAA 300 CCCCAGATTA ACTACAAGAT CACATTCAGG TAAATCCAAG CCTCTAGCTG AAAGCTCATT 69855 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCCAGATTA ACTACAAGAT CACATTCAGG TAAATCCAAG CCTCTAGCTG AAAGCTCATT 360 CGTTAGCAGC ACTCTAATCT CCCCATTTCT GAACTTCTTT AAGATTGTTG ATCTCACAAG 69915 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTAGCAGC ACTCTAATCT CCCCATTTCT GAACTTCTTT AAGATTGTTG ATCTCACAAG 420 TTTGCTAAGA TCACCATGTA ATTCTGCAGC ATTCATACCA CGAGCTTCTA GTTTGAAGAC 69975 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGCTAAGA TCACCATGTA ATTCTGCAGC ATTCATACCA CGAGCTTCTA GTTTGAAGAC 480 AGCATCTTTT AGCTGTTTTG TGTGGTTCAT AAAAGCTATT ACACATTTGG CATCCAGAGC 70035 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCATCTTTT AGCTGTTTTG TGTGGTTCAT AAAAGCTATT ACACATTTGG CATCCAGAGC 540 GTGCACACAC CTTCTTAACA TATCAACTTT GTGCTGTATC CTAGTAATAG TGTAATAATG 70095 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGCACACAC CTTCTTAACA TATCAACTTT GTGCTGTATC CTAGTAATAG TGTAATAATG 600 CTGCAAATTA GGGGGTAAGC TCTGAACATC AGGCATAGGT TGTACACTTG AGCTTGAATC 70155 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGCAAATTA GGGGGTAAGC TCTGAACATC AGGCATAGGT TGTACACTTG AGCTTGAATC 660 AGTAGTAGAA GGTGTTCCCG GTATATTAAC AGATCCAGAA GGAGTGACAG ACTCGAGTGG 70215 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTAGTAGAA GGTGTTCCCG GTATATTAAC AGATCCAGAA GGAGTGACAG ACTCGAGTGG 720 AACAACTTTA TTGGCTTGGA TGAGAAGTGG ATCACAACCC CAACTTC 70262 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| AACAACTTTA TTGGCTTGGA TGAGAAGTGG ATCACAACCC CAACTTC 767 hqPGS_C08HBa0235H18.1+_SGN-E537429- (69496 70262) ******************************************************************************** EST sequence 488 -strand 712 n (File: SGN-E537436-) 1 AGGTGTCTTT AGTGATTTGT CTAGTTAAAA CTTGACAGAA GCAAGTGCTA TGCAGTTTAA 61 TCTTCTATAA TGACAAGATT CGCCTCAGGA AATTCACATG CCTCGATAGA GAGGGAAAGT 121 TGCTTCTGTA GCTTTTTTAA CACAAAGACT TCTGACTCTT CACATATGGT TACTACCGTG 181 CCCTTGCGAC CAAGCCTGCC CGTACGACCA GCTCGATGAG CATAATGAAC CGAGTCAGTA 241 GGTAACCCCA GATTAACTAC AAGATCACAT TCAGGTAAAT CCAAGCCTCT AGCTGAAAGC 301 TCATTCGTTA GCAGCACTCT AATCTCCCCA TTTCTGAACT TCTTTAAGAT TGTTGATCTC 361 ACAAGTTTGC TAAGATCACC ATGTAATTCT GCAGCATTCA TACCACGAGC TTCTAGTTTG 421 AAGACAGCAT CTTTTAGCTG TTTTGTGTGG TTCATAAAAG CTATTACACA TTTGGCATCC 481 AGAGCGTGCA CACACCTTCT TAACATATCA ACTTTGTGCT GTATCCTAGT AATAGTGTAA 541 TAATGCTGCA AATTAGGGGG TAAGCTCTGA ACATCAGGCA TAGGTTGTAC ACTTGAGCTT 601 GAATCAGTAG TAGAAGGTGT TCCCGGTATA TTAACAGATC CAGAAGGAGT GACAGACTCG 661 AGTGGAACAA CTTTATTGGC TTGGATGAGA AGTGGATCAC AACCCCAACT TC Predicted gene structure (within gDNA segment 68914 to 70862): Exon 1 69551 70262 ( 712 n); cDNA 1 712 ( 712 n); score: 0.993 MATCH C08HBa0235H18.1+ SGN-E537436- 0.993 712 1.000 C PGS_C08HBa0235H18.1+_SGN-E537436- (69551 70262) Alignment (genomic DNA sequence = upper lines): AGTTGTCTTT AGTGATTTGT CTAGTTAAAA CTTGACAGAA GCAAGTGCTA TGCAGTTTAA 69610 || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGTGTCTTT AGTGATTTGT CTAGTTAAAA CTTGACAGAA GCAAGTGCTA TGCAGTTTAA 60 TCTTCTATAA TGACAAGATT TCCCTCAGAA AATTCACATG CCTCGATAGA GAGGGAAAGT 69670 |||||||||| |||||||||| |||||| | |||||||||| |||||||||| |||||||||| TCTTCTATAA TGACAAGATT CGCCTCAGGA AATTCACATG CCTCGATAGA GAGGGAAAGT 120 TGCTTCTGTA GCTTTTTTAC CACAAAGACT TCTGACTCTT CACATATGGT TACTACCGTG 69730 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCTTCTGTA GCTTTTTTAA CACAAAGACT TCTGACTCTT CACATATGGT TACTACCGTG 180 CCCTTGCGAC CAAGCCTGCC CGTACGACCA GCTCGATGAG CATAATGAAC CGAGTCAGTA 69790 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCTTGCGAC CAAGCCTGCC CGTACGACCA GCTCGATGAG CATAATGAAC CGAGTCAGTA 240 GGTAACCCCA GATTAACTAC AAGATCACAT TCAGGTAAAT CCAAGCCTCT AGCTGAAAGC 69850 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTAACCCCA GATTAACTAC AAGATCACAT TCAGGTAAAT CCAAGCCTCT AGCTGAAAGC 300 TCATTCGTTA GCAGCACTCT AATCTCCCCA TTTCTGAACT TCTTTAAGAT TGTTGATCTC 69910 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCATTCGTTA GCAGCACTCT AATCTCCCCA TTTCTGAACT TCTTTAAGAT TGTTGATCTC 360 ACAAGTTTGC TAAGATCACC ATGTAATTCT GCAGCATTCA TACCACGAGC TTCTAGTTTG 69970 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAGTTTGC TAAGATCACC ATGTAATTCT GCAGCATTCA TACCACGAGC TTCTAGTTTG 420 AAGACAGCAT CTTTTAGCTG TTTTGTGTGG TTCATAAAAG CTATTACACA TTTGGCATCC 70030 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGACAGCAT CTTTTAGCTG TTTTGTGTGG TTCATAAAAG CTATTACACA TTTGGCATCC 480 AGAGCGTGCA CACACCTTCT TAACATATCA ACTTTGTGCT GTATCCTAGT AATAGTGTAA 70090 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAGCGTGCA CACACCTTCT TAACATATCA ACTTTGTGCT GTATCCTAGT AATAGTGTAA 540 TAATGCTGCA AATTAGGGGG TAAGCTCTGA ACATCAGGCA TAGGTTGTAC ACTTGAGCTT 70150 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATGCTGCA AATTAGGGGG TAAGCTCTGA ACATCAGGCA TAGGTTGTAC ACTTGAGCTT 600 GAATCAGTAG TAGAAGGTGT TCCCGGTATA TTAACAGATC CAGAAGGAGT GACAGACTCG 70210 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAATCAGTAG TAGAAGGTGT TCCCGGTATA TTAACAGATC CAGAAGGAGT GACAGACTCG 660 AGTGGAACAA CTTTATTGGC TTGGATGAGA AGTGGATCAC AACCCCAACT TC 70262 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || AGTGGAACAA CTTTATTGGC TTGGATGAGA AGTGGATCAC AACCCCAACT TC 712 hqPGS_C08HBa0235H18.1+_SGN-E537436- (69551 70262) ******************************************************************************** EST sequence 489 -strand 693 n (File: SGN-E537469-) 1 TCTAGTTAAA ACTTGACAGA AGCAAGTGCT ATGCAGTTAA ATCTTCTATA ATGACAAGAT 61 TTCCCTCAGA AAATTCACAT GCCTCGATAG AGAGGGAAAG TTGCTTCTGT AGCTTTTTTA 121 CCACAAAGAC TTCTGACTCT TCACATATGG TTACTACCGT GCCCTTGCGA CCAAGCCTGC 181 CCGTACGACC AGCTCGATGA GCATAATGAA CCGAGTCAGT AGGTAACCCC AGATTAACTA 241 CAAGATCACA TTCAGGTAAA TCCAAGCCTC TAGCTGAAAG CTCATTCGTT AGCAGCACTC 301 TAATCTCCCC ATTTCTGAAC TTCTTTAAGA TTGTTGATCT CACAAGTTTG CTAAGATCAC 361 CATGTAATTC TGCAGCATTC ATACCACGAG CTTCTAGTTT GAAGACAGCA TCTTTTAGCT 421 GTTTTGTGTG GTTCATAAAA GCTATTACAC ATTTGGCATC CAGAGCGTGC ACACACCTTC 481 TTAACATATC AACTTTGTGC TGTATCCTAG TAATAGTGTA ATAATGCTGC AAATTAGGGG 541 GTAAGCTCTG AACATCAGGC ATAGGTTGTA CACTTGAGCT TGAATCAGTA GTAGAAGGTG 601 TTCCCGGTAT ATTAACAGAT CCAGAAGGAG TGACAGACTC GAGTGGAACA ACTTTATTGG 661 CTTGGATGAG AAGTGGATCA CAACCCCAAC TTC Predicted gene structure (within gDNA segment 68960 to 70862): Exon 1 69570 70262 ( 693 n); cDNA 1 693 ( 693 n); score: 0.999 MATCH C08HBa0235H18.1+ SGN-E537469- 0.999 693 1.000 C PGS_C08HBa0235H18.1+_SGN-E537469- (69570 70262) Alignment (genomic DNA sequence = upper lines): TCTAGTTAAA ACTTGACAGA AGCAAGTGCT ATGCAGTTTA ATCTTCTATA ATGACAAGAT 69629 |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| TCTAGTTAAA ACTTGACAGA AGCAAGTGCT ATGCAGTTAA ATCTTCTATA ATGACAAGAT 60 TTCCCTCAGA AAATTCACAT GCCTCGATAG AGAGGGAAAG TTGCTTCTGT AGCTTTTTTA 69689 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCCTCAGA AAATTCACAT GCCTCGATAG AGAGGGAAAG TTGCTTCTGT AGCTTTTTTA 120 CCACAAAGAC TTCTGACTCT TCACATATGG TTACTACCGT GCCCTTGCGA CCAAGCCTGC 69749 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCACAAAGAC TTCTGACTCT TCACATATGG TTACTACCGT GCCCTTGCGA CCAAGCCTGC 180 CCGTACGACC AGCTCGATGA GCATAATGAA CCGAGTCAGT AGGTAACCCC AGATTAACTA 69809 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGTACGACC AGCTCGATGA GCATAATGAA CCGAGTCAGT AGGTAACCCC AGATTAACTA 240 CAAGATCACA TTCAGGTAAA TCCAAGCCTC TAGCTGAAAG CTCATTCGTT AGCAGCACTC 69869 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGATCACA TTCAGGTAAA TCCAAGCCTC TAGCTGAAAG CTCATTCGTT AGCAGCACTC 300 TAATCTCCCC ATTTCTGAAC TTCTTTAAGA TTGTTGATCT CACAAGTTTG CTAAGATCAC 69929 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATCTCCCC ATTTCTGAAC TTCTTTAAGA TTGTTGATCT CACAAGTTTG CTAAGATCAC 360 CATGTAATTC TGCAGCATTC ATACCACGAG CTTCTAGTTT GAAGACAGCA TCTTTTAGCT 69989 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGTAATTC TGCAGCATTC ATACCACGAG CTTCTAGTTT GAAGACAGCA TCTTTTAGCT 420 GTTTTGTGTG GTTCATAAAA GCTATTACAC ATTTGGCATC CAGAGCGTGC ACACACCTTC 70049 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTTGTGTG GTTCATAAAA GCTATTACAC ATTTGGCATC CAGAGCGTGC ACACACCTTC 480 TTAACATATC AACTTTGTGC TGTATCCTAG TAATAGTGTA ATAATGCTGC AAATTAGGGG 70109 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAACATATC AACTTTGTGC TGTATCCTAG TAATAGTGTA ATAATGCTGC AAATTAGGGG 540 GTAAGCTCTG AACATCAGGC ATAGGTTGTA CACTTGAGCT TGAATCAGTA GTAGAAGGTG 70169 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTAAGCTCTG AACATCAGGC ATAGGTTGTA CACTTGAGCT TGAATCAGTA GTAGAAGGTG 600 TTCCCGGTAT ATTAACAGAT CCAGAAGGAG TGACAGACTC GAGTGGAACA ACTTTATTGG 70229 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCCGGTAT ATTAACAGAT CCAGAAGGAG TGACAGACTC GAGTGGAACA ACTTTATTGG 660 CTTGGATGAG AAGTGGATCA CAACCCCAAC TTC 70262 |||||||||| |||||||||| |||||||||| ||| CTTGGATGAG AAGTGGATCA CAACCCCAAC TTC 693 hqPGS_C08HBa0235H18.1+_SGN-E537469- (69570 70262) ******************************************************************************** EST sequence 983 -strand 388 n (File: SGN-E265111-) 1 CTCCCCATTT CTGAACTTCT TTAAGATTGT TGATCTCACA AGTTTGCTAA GATCACCATG 61 TAATTCTGCA GCATTCATAC CACGAGCTTC TAGTTTGAAG ACAGCATCTT TTAGCTGTTT 121 TGTGTGGTTC ATAAAAGCTA TTACACATTT GGCATCCAGA GCGTGCACAC ACCTTCTTAA 181 CATATCAACT TTGTGCTGTA TCCTAGTAAT AGTGTAATAA TGCTGCAAAT TAGGGGGTAA 241 GCTCTGAACA TCAGGCATAG GTTGTACACT TGAGCTTGAA TCAGTAGTAG AAGGTGTTCC 301 CGGTATATTA ACAGATCCAG AAGGAGTGAC AGACTCGAGT GGAACAACTT TATTGGCTTG 361 GATGAGAAGT GGATCACAAC CCCAACTT Predicted gene structure (within gDNA segment 69264 to 70861): Exon 1 69874 70261 ( 388 n); cDNA 1 388 ( 388 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E265111- 1.000 388 1.000 C PGS_C08HBa0235H18.1+_SGN-E265111- (69874 70261) Alignment (genomic DNA sequence = upper lines): CTCCCCATTT CTGAACTTCT TTAAGATTGT TGATCTCACA AGTTTGCTAA GATCACCATG 69933 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCCCCATTT CTGAACTTCT TTAAGATTGT TGATCTCACA AGTTTGCTAA GATCACCATG 60 TAATTCTGCA GCATTCATAC CACGAGCTTC TAGTTTGAAG ACAGCATCTT TTAGCTGTTT 69993 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATTCTGCA GCATTCATAC CACGAGCTTC TAGTTTGAAG ACAGCATCTT TTAGCTGTTT 120 TGTGTGGTTC ATAAAAGCTA TTACACATTT GGCATCCAGA GCGTGCACAC ACCTTCTTAA 70053 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGTGGTTC ATAAAAGCTA TTACACATTT GGCATCCAGA GCGTGCACAC ACCTTCTTAA 180 CATATCAACT TTGTGCTGTA TCCTAGTAAT AGTGTAATAA TGCTGCAAAT TAGGGGGTAA 70113 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATATCAACT TTGTGCTGTA TCCTAGTAAT AGTGTAATAA TGCTGCAAAT TAGGGGGTAA 240 GCTCTGAACA TCAGGCATAG GTTGTACACT TGAGCTTGAA TCAGTAGTAG AAGGTGTTCC 70173 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTCTGAACA TCAGGCATAG GTTGTACACT TGAGCTTGAA TCAGTAGTAG AAGGTGTTCC 300 CGGTATATTA ACAGATCCAG AAGGAGTGAC AGACTCGAGT GGAACAACTT TATTGGCTTG 70233 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGTATATTA ACAGATCCAG AAGGAGTGAC AGACTCGAGT GGAACAACTT TATTGGCTTG 360 GATGAGAAGT GGATCACAAC CCCAACTT 70261 |||||||||| |||||||||| |||||||| GATGAGAAGT GGATCACAAC CCCAACTT 388 hqPGS_C08HBa0235H18.1+_SGN-E265111- (69874 70261) ******************************************************************************** EST sequence 1203 +strand 772 n (File: SGN-E546588+) 1 GGAAGGGCAG CTAAGGTGTG AAGAAGAAGA TGGAGGAGTC TGATTGGTGA TGATAGTAAA 61 TTGCTTAAGA GGATTTTGGC ATTATAAATA GTCGTATCAA GTTTGAGTTG TTCCATGAGA 121 TAGCAACTGG GAAAACAAGT ACTAGAAAAA CCATGCCTGC TTTAGTGCTA ACAAGGGCCC 181 TCTTGTTAAT TGGGGATTCT TTAGCTTTCA GAAAAGTTAC ACAGTTTACA CGGATAGCTC 241 CATCTCAAGG CAATGTTCGC TTTTTAAGTA GCAGTGGATC CCTCACTCTA GCTAGCCTTG 301 GATTGAAGAG TGAAGTTAAG ACAGTAAGTG CAAATGAGAA AAATAAGCTC CAGCAGGGAA 361 TTTCAACAAT TGAGGTCCCG AAGAGCAGAG AGAAGAAAAG AGTTGGTGGC AATAAACAAG 421 GATTGGTTAA GGAGAAAAAC CCAGTAGATA TAATGACTGC ACCATTTGCT GCGAAGTCAT 481 TTTCAGAACT TGGCCTTCCA CCTTTGTTGG TCGAAAGACT AGAGACGGAA GGCTTTACGA 541 TTCCGACTGA TGTTCAAGCT GCTGCAGTTC CAACTGTTCT TAAAAATCAT GATGTTGTGA 601 TCCAGTCATA CACAGGTTCA GGAAAAACAT TAGCTTATCT CCTTCCCATA CTGTCTCGAG 661 TTGGTCCGTT GAAGGAAGAA CTTCCAGATG GCTATGAAAC TGGGAACAAA ATAGACATCG 721 AAGCAGTTAT AGTAGCTCCT TCGAGGGAAC TTGGCATGCA GATTGTCAGG GA Predicted gene structure (within gDNA segment 72329 to 70024): Exon 1 72228 72191 ( 38 n); cDNA 1 38 ( 38 n); score: 0.947 Intron 1 72190 71368 ( 823 n); Pd: 0.991 (s: 0), Pa: 0.980 (s: 1.00) Exon 2 71367 70634 ( 734 n); cDNA 39 772 ( 734 n); score: 0.990 MATCH C08HBa0235H18.1- SGN-E546588+ 0.990 772 1.000 C PGS_C08HBa0235H18.1-_SGN-E546588+ (72228 72191,71367 70634) Alignment (genomic DNA sequence = upper lines): GGAAGGGCAG CTAAGTTGTG AAGAAGAAGA TGAAGGAGGT AAAAATACAC CTTCAATTTC 72169 |||||||||| ||||| |||| |||||||||| || ||||| GGAAGGGCAG CTAAGGTGTG AAGAAGAAGA TGGAGGAG.. .......... .......... 38 CTCTTTATTC TCTTACCCAA TTCAATGGAG GCTAAGCTTT CGTGTTTATT TGTTTTTGTT 72109 .......... .......... .......... .......... .......... .......... 38 AGTTTCATGT TCTCTTATAT GTTTAGTTTT CCTTCAAATT TTGCTTCTTG TTTGTTTCCA 72049 .......... .......... .......... .......... .......... .......... 38 TTTTTATTTT TTGATGAGTT CGAACTCTCT AGAAAGTTGA AAACTTTATA GATTATGCAT 71989 .......... .......... .......... .......... .......... .......... 38 TGAATGTGAT AGTGAAAATG CGTAGGTGTG TAGAAATGAG AGTTGAGGGT TTGATATGTT 71929 .......... .......... .......... .......... .......... .......... 38 TTTGATGAAA TGGTCACCAT GTGTTTGATG AAATGTTTAG TGTCTTCTAG TTTCTGGGTG 71869 .......... .......... .......... .......... .......... .......... 38 TTAAAAAAAT GTCTATATAA GAGGTTATGT GGGATATGAT TTACTGCAGT AAACGTCATT 71809 .......... .......... .......... .......... .......... .......... 38 CAGTCATCCC TGCTATTGAT CTTCAAGAGT GGACAGTTAT GTGGTGTTTG AATGATATAG 71749 .......... .......... .......... .......... .......... .......... 38 TTGAACTATG TTTAGTTAGG GAGTAGAGGA TATCACTTGG CACCTAAGGT GAGGTTCAAG 71689 .......... .......... .......... .......... .......... .......... 38 CTTAGTGGAG AAAAGGAAAA TAGGATTTAT GGCTGAAGGG AGCGGGATGG ATATAGAGAA 71629 .......... .......... .......... .......... .......... .......... 38 TTCATATAAC AGAGTACAGA CACTAACTAG TTTTGATTGA TCGATTGATT CATTGAGTTG 71569 .......... .......... .......... .......... .......... .......... 38 TTTGACTTGC CTTTTGCACT AATGCTCTTT GCTGATTATT TTCTTTTTCT TGAAGAGGGA 71509 .......... .......... .......... .......... .......... .......... 38 TATTACAGCA AAAGAGGCAT ACTTTTGTCA CTACATTCTC AATTTTTAGT AAAAAGAATG 71449 .......... .......... .......... .......... .......... .......... 38 CTGATATGCT AAATCTTAAT TTTACTTATC ATAGGTCCTA TATTGTTATG TATATTTGAT 71389 .......... .......... .......... .......... .......... .......... 38 ATTTTAACAT TTTTGTTGCA GTCTGATTGG TGATGATAGT AAATTGCTTA AGAGGATTTT 71329 ||||||||| |||||||||| |||||||||| |||||||||| .......... .......... .TCTGATTGG TGATGATAGT AAATTGCTTA AGAGGATTTT 77 GGCATTATAA ATAGTCATAT CAAGTTTGAG TTGTTCCATG AGATAGCAAC TGGGAAAACA 71269 |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| GGCATTATAA ATAGTCGTAT CAAGTTTGAG TTGTTCCATG AGATAGCAAC TGGGAAAACA 137 AGTACTAGAA AAACCATGCC TGCTTTAGTG CTAACAAGGG CCCTCTTGTT AATTGGGGAT 71209 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTACTAGAA AAACCATGCC TGCTTTAGTG CTAACAAGGG CCCTCTTGTT AATTGGGGAT 197 TCTTTAGCTT TCAGAAAAGC TACACAGTTT ACACGGATAG CTCCATCTCA AGGCAATGTT 71149 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTTAGCTT TCAGAAAAGT TACACAGTTT ACACGGATAG CTCCATCTCA AGGCAATGTT 257 CGCTTTTTAA GTAGCAGTGG ATCCCTCACT CTAGCTAGCC TTGGATTGAA GAGTGAAGTT 71089 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTTTTTAA GTAGCAGTGG ATCCCTCACT CTAGCTAGCC TTGGATTGAA GAGTGAAGTT 317 AAGACAGTAA GTGCAAATGA GAAAAATAAG CTCCAGCAGG GAATTTCAAC TATTGAGGTC 71029 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| AAGACAGTAA GTGCAAATGA GAAAAATAAG CTCCAGCAGG GAATTTCAAC AATTGAGGTC 377 CCAAAGAGCA GAGAGAAGAA AAGAGTTAGT GGCAATAAAC AAGGATTGGT TAAGGAGAAA 70969 || ||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| CCGAAGAGCA GAGAGAAGAA AAGAGTTGGT GGCAATAAAC AAGGATTGGT TAAGGAGAAA 437 AACCCAGTAG ATATAATGAC TGCACCATTT GCTGCGAAGT CATTTTCAGA ACTTGGCCTT 70909 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACCCAGTAG ATATAATGAC TGCACCATTT GCTGCGAAGT CATTTTCAGA ACTTGGCCTT 497 CCACCTTTGT TGGTCGAAAG ACTAGAGACG GAAGGCTTTA CGATTCCGAC TGATGTTCAA 70849 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCACCTTTGT TGGTCGAAAG ACTAGAGACG GAAGGCTTTA CGATTCCGAC TGATGTTCAA 557 GCTGCTGCAG TTCCAACTGT TCTTAAAAAT CATGATGTTG TGATTCAGTC CTACACAGGT 70789 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| ||||||||| GCTGCTGCAG TTCCAACTGT TCTTAAAAAT CATGATGTTG TGATCCAGTC ATACACAGGT 617 TCAGGAAAAA CATTAGCTTA TCTCCTTCCC ATACTGTCTC GAGTTGGTCC GTTGAAGGAA 70729 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAGGAAAAA CATTAGCTTA TCTCCTTCCC ATACTGTCTC GAGTTGGTCC GTTGAAGGAA 677 GAACTTCCAG ATGGCTATGA AACTGGGAAC AAAATAGACA TCGAAGCAGT TATAGTAGCT 70669 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAACTTCCAG ATGGCTATGA AACTGGGAAC AAAATAGACA TCGAAGCAGT TATAGTAGCT 737 CCTTCGAGGG AACTTGGCAT GCAGATTGTC AGGGA 70634 |||||||||| |||||||||| |||||||||| ||||| CCTTCGAGGG AACTTGGCAT GCAGATTGTC AGGGA 772 hqPGS_C08HBa0235H18.1-_SGN-E546588+ (72228 72191,71367 70634) ******************************************************************************** EST sequence 700 +strand 600 n (File: SGN-E297685+) 1 TTTGTTGGTC GAAAGACTAG AGACGGAAGG CTTTACGATT CCGACTGATG TTCAAGCTGC 61 TGCAGTTCCA ACTGTTCTTA AAAATCATGA TGTTGTGATT CAGTCCTACA CAGGTTCAGG 121 AAAAACATTA GCTTATCTCC TTCCCATACT GTCTCGAGTT GGTCCGTTGA AGGAAGAACT 181 TCCAGATGGC TATGAAACTG GGAACAAAAT AGACATCGAA GCAGTTATAG TAGCTCCTTC 241 GAGGGAACTT GGCATGCAGA TTGTCAGGGA AGTTGAAAAG CTGTTAGGAC CAGCGAATAA 301 GAAACTAGTC CAGCAGCTTG TAGGGGGTGC AAACCGATCT AGACAGGAGG ATGCTCTGAA 361 GAAGAACAAG CCCGACATTG TAGTGGGGAC ACCAGGGCGG ATAGCAGAGA TTAGTGCAGC 421 TGGAAAGCTT CCTACCCATG GTTGTCGTTA CTTGGTATTG GATGAAATTG ATCAACTCCT 481 TGCATTCACT TTCAGGGAGG ACATGAAGCG TATATTAGAC CATGTGGGGA GAAGACCTGG 541 TGCACGTGGA GGAGAGTCAA ATAGTCCACT TGTCAAGCGA GCTGCACGTC AGACTATTAT Predicted gene structure (within gDNA segment 71503 to 69694): Exon 1 70903 70304 ( 600 n); cDNA 1 600 ( 600 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E297685+ 1.000 600 1.000 C PGS_C08HBa0235H18.1-_SGN-E297685+ (70903 70304) Alignment (genomic DNA sequence = upper lines): TTTGTTGGTC GAAAGACTAG AGACGGAAGG CTTTACGATT CCGACTGATG TTCAAGCTGC 70844 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGTTGGTC GAAAGACTAG AGACGGAAGG CTTTACGATT CCGACTGATG TTCAAGCTGC 60 TGCAGTTCCA ACTGTTCTTA AAAATCATGA TGTTGTGATT CAGTCCTACA CAGGTTCAGG 70784 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCAGTTCCA ACTGTTCTTA AAAATCATGA TGTTGTGATT CAGTCCTACA CAGGTTCAGG 120 AAAAACATTA GCTTATCTCC TTCCCATACT GTCTCGAGTT GGTCCGTTGA AGGAAGAACT 70724 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAACATTA GCTTATCTCC TTCCCATACT GTCTCGAGTT GGTCCGTTGA AGGAAGAACT 180 TCCAGATGGC TATGAAACTG GGAACAAAAT AGACATCGAA GCAGTTATAG TAGCTCCTTC 70664 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCAGATGGC TATGAAACTG GGAACAAAAT AGACATCGAA GCAGTTATAG TAGCTCCTTC 240 GAGGGAACTT GGCATGCAGA TTGTCAGGGA AGTTGAAAAG CTGTTAGGAC CAGCGAATAA 70604 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGGGAACTT GGCATGCAGA TTGTCAGGGA AGTTGAAAAG CTGTTAGGAC CAGCGAATAA 300 GAAACTAGTC CAGCAGCTTG TAGGGGGTGC AAACCGATCT AGACAGGAGG ATGCTCTGAA 70544 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAACTAGTC CAGCAGCTTG TAGGGGGTGC AAACCGATCT AGACAGGAGG ATGCTCTGAA 360 GAAGAACAAG CCCGACATTG TAGTGGGGAC ACCAGGGCGG ATAGCAGAGA TTAGTGCAGC 70484 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGAACAAG CCCGACATTG TAGTGGGGAC ACCAGGGCGG ATAGCAGAGA TTAGTGCAGC 420 TGGAAAGCTT CCTACCCATG GTTGTCGTTA CTTGGTATTG GATGAAATTG ATCAACTCCT 70424 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGAAAGCTT CCTACCCATG GTTGTCGTTA CTTGGTATTG GATGAAATTG ATCAACTCCT 480 TGCATTCACT TTCAGGGAGG ACATGAAGCG TATATTAGAC CATGTGGGGA GAAGACCTGG 70364 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCATTCACT TTCAGGGAGG ACATGAAGCG TATATTAGAC CATGTGGGGA GAAGACCTGG 540 TGCACGTGGA GGAGAGTCAA ATAGTCCACT TGTCAAGCGA GCTGCACGTC AGACTATTAT 70304 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCACGTGGA GGAGAGTCAA ATAGTCCACT TGTCAAGCGA GCTGCACGTC AGACTATTAT 600 hqPGS_C08HBa0235H18.1-_SGN-E297685+ (70903 70304) ******************************************************************************** EST sequence 457 -strand 722 n (File: SGN-E578000-) 1 GTCGTGACAA TATCATATAA CATATAGCAC ATTTTGCATG TAGCACCAGA TAAGCTTTAC 61 CGTTTGAAAT CTCGATTCAA ACATTGAAAT TCTTGGATAG TCACGAGAAA TCCGGCGGAT 121 ATACCGGCAG GTATACTAGG AGGACGAGCT TTGGAATTGC TTCGTACGGG GCAAGTTGAC 181 GGCGGCGGTG CGGCCATCAC AGCGGCGGAG AGCAGCGGCT TCAAGGCGGA TGAAGATATG 241 AGCCCACGGT TGTTTGGTGT ATCAATTGGG GTAAAGCGCG TGAGGAGAAG CAGCGAAGAA 301 GAATCTGAGG ATCAGGATCA AGTACAACCG CATGGATCAG ACATGAAATC AGAGCCGTTA 361 GATTCAGGAA GTGCTCAACA TGATGATCAG CCATGGATTG ATCGATTAGA TTTAGGGTGT 421 TGATTTCCCT TGGAGGGTGG GGTCCACAGA AGCACTTCGG CATTGATGAC CAACACGTGT 481 ACAATGGAAG ATTGTTGGTT GTTTCTGGTG GTTTCTAGAA GAAGTGAGAA ATCAAGTCAA 541 ATGGTTTTTT GAGAAGGCCC CAAAAGAGGT GGAAAAGGAG AAAAACGAAG TGGCTTTTTT 601 AATATGTTTT CATAATTGGA TTGGAAAAAA TAGAGGGGGC TGAGCTGGTT GGTTGAAAAA 661 GATGACAAAT GTTGGAAATG ATAGTCAAAT GTATTAATTA GTTGGGATTA GGGAAATATT 721 TA Predicted gene structure (within gDNA segment 74475 to 77378): Exon 1 76159 76778 ( 620 n); cDNA 103 722 ( 620 n); score: 0.995 MATCH C08HBa0235H18.1+ SGN-E578000- 0.995 620 0.859 C PGS_C08HBa0235H18.1+_SGN-E578000- (76159 76778) Alignment (genomic DNA sequence = upper lines): ACGGCGAATC CGGCGGATAT ACCGGCAGGT ATACTAGGAG GACGAGCTTT GGAATTGCTT 76218 ||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACGAGAAATC CGGCGGATAT ACCGGCAGGT ATACTAGGAG GACGAGCTTT GGAATTGCTT 162 CGTACGGGGC AAGTTGACGG CGGCGGTGCG GCCATCACAG CGGCGGAGAG CAGCGGCTTC 76278 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTACGGGGC AAGTTGACGG CGGCGGTGCG GCCATCACAG CGGCGGAGAG CAGCGGCTTC 222 AAGGCGGATG AAGATATGAG CCCACGGTTG TTTGGTGTAT CAATTGGGGT AAAGCGCGTG 76338 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGCGGATG AAGATATGAG CCCACGGTTG TTTGGTGTAT CAATTGGGGT AAAGCGCGTG 282 AGGAGAAGCA GCGAAGAAGA ATCTGAGGAT CAGGATCAAG TACAACCGCA TGGATCAGAC 76398 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGAGAAGCA GCGAAGAAGA ATCTGAGGAT CAGGATCAAG TACAACCGCA TGGATCAGAC 342 ATGAAATCAG AGCCGTTAGA TTCAGGAAGT GCTCAACATG ATGATCAGCC ATGGATTGAT 76458 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGAAATCAG AGCCGTTAGA TTCAGGAAGT GCTCAACATG ATGATCAGCC ATGGATTGAT 402 CGATTAGATT TAGGGTGTTG ATTTCCCTTG GAGGGTGGGG TCCACAGAAG CACTTCGGCA 76518 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGATTAGATT TAGGGTGTTG ATTTCCCTTG GAGGGTGGGG TCCACAGAAG CACTTCGGCA 462 TTGATGACCA ACACGTGTAC AATGGAAGAT TGTTGGTTGT TTCTGGTGGT TTCTAGAAGA 76578 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATGACCA ACACGTGTAC AATGGAAGAT TGTTGGTTGT TTCTGGTGGT TTCTAGAAGA 522 AGTGAGAAAT CAAGTCAAAT GGTTTTTTGA GAAGGCCCCA AAAGAGGTGG AAAAGGAGAA 76638 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTGAGAAAT CAAGTCAAAT GGTTTTTTGA GAAGGCCCCA AAAGAGGTGG AAAAGGAGAA 582 AAACGAAGTG GCTTTTTTAA TATGTTTTCA TAATTGGATT GGAAAAAATA GAGGGGGCTG 76698 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACGAAGTG GCTTTTTTAA TATGTTTTCA TAATTGGATT GGAAAAAATA GAGGGGGCTG 642 AGCTGGTTGG TTGAAAAAGA TGACAAATGT TGGAAATGAT AGTCAAATGT ATTAATTAGT 76758 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCTGGTTGG TTGAAAAAGA TGACAAATGT TGGAAATGAT AGTCAAATGT ATTAATTAGT 702 TGGGATTAGG GAAATATTTA 76778 |||||||||| |||||||||| TGGGATTAGG GAAATATTTA 722 hqPGS_C08HBa0235H18.1+_SGN-E578000- (76159 76778) ******************************************************************************** EST sequence 124 +strand 580 n (File: SGN-E204223+) 1 ATGGTCTTCT TTGGTTAGGA GGGCCAATAA AAATTGAAAT GAAAACAGGA AGGAAAGATA 61 GCAAGGAAAC TTACTTTTCA GAAGTTGAGA AGTACCTCCC TAATCACAAC GATTCAATCT 121 CATCTGTGCT TTCAAGATTT CAATCAATTG GTGTTGATAC TGAAGGAACT GTTGCTCTAC 181 TTGGTAATCA ACTCTCTAAA CTCTCGTTTA ATCATAAATT TTTTAAAAAT AATTAATTAT 241 ACAAAATTAT GTTTATTTTG ATCGAAAAAT TCATGTAGAG TTCATTCTTA GGGCCCGTTT 301 GGATGGACTT AGCTTTAAAA AAGTACTTTT AAAAGTTATG CATTTGGATA AAAGTGTTGA 361 AGTTGCTATG CCAAACGTGA AAATGGAAAA ATGGAAGAAA GAGATGTTAG AGTTATGTGG 421 ATAATTTGGA GATTGTATAA AAATATTAAG GGCAAAAAGA TAAAAATGTG GTCAACTTAA 481 AACAGCTTAT AAGCTAAAAA AAAAGCACCC CTACCCCAGC TTTTAACTTT TGGCTTAAAA 541 TAAGTTTTTT TTTTTAACTT AAAATAAGTT ATTTTGAGTA Predicted gene structure (within gDNA segment 76204 to 82654): Exon 1 77063 77091 ( 29 n); cDNA 257 286 ( 30 n); score: 0.638 Intron 1 77092 81717 (4626 n); Pd: 0.000 (s: 0), Pa: 0.663 (s: 0.72) Exon 2 81718 81773 ( 56 n); cDNA 287 333 ( 47 n); score: 0.750 Intron 2 81774 81803 ( 30 n); Pd: 0.000 (s: 0.78), Pa: 0.765 (s: 0.81) ?? Exon 3 81804 82044 ( 241 n); cDNA 334 580 ( 247 n); score: 0.896 MATCH C08HBa0235H18.1+ SGN-E204223+ 0.869 326 0.562 C PGS_C08HBa0235H18.1+_SGN-E204223+ (77063 77091,81718 81773,81804 82044) Alignment (genomic DNA sequence = upper lines): TTCCATTGAA TAATTAAAG- AGAGTTAAAT GGGGGAGTAG AACCTAGTTA GAGATGAAAT 77121 || || ||| |||| | | |||||| | | TTTGATCGAA AAATTCATGT AGAGTTCATT .......... .......... .......... 286 TATCAAATAT TTTGTAACTT TATTTAAAGA AAAAAAAAAG AAAAGGGAAG TACGTTAACA 77181 .......... .......... .......... .......... .......... .......... 286 AAAAAAAAGA TAAATTATAT GTAGACTATA AATTAAATTG AGTCGTCAAA GAAGTAACAC 77241 .......... .......... .......... .......... .......... .......... 286 AGACAATTAA ATATAATTAC ACCTCCATTT ATTTGTCAAA ATCCTTGACC ACACTTTTAT 77301 .......... .......... .......... .......... .......... .......... 286 GAAACTGATA TAATTATTCT CTTGTCTTAA AATATTTATT GTATTTTTCA CTTTTGAACA 77361 .......... .......... .......... .......... .......... .......... 286 CTTTAAATGA AACATTAATT TAAAGAAACA TTTAGCTTTT ATTTATTCAT TTATATTTTG 77421 .......... .......... .......... .......... .......... .......... 286 AGATATAATT TCTTTTTATA TCTATCATAA TTGTAGTCTT CAAATATCAT ATTACCATTA 77481 .......... .......... .......... .......... .......... .......... 286 AAAGCACGAC GTGAAAAAAA ATTATAATTT GCCTTAGACT TCTTAAATGA CAAATATTTT 77541 .......... .......... .......... .......... .......... .......... 286 GTTGAGACAA TTATTTTTGG TAAAAAGATA ACATGTCTGA TTATTTTTAG TTTTGAACAT 77601 .......... .......... .......... .......... .......... .......... 286 TCCTCTACTC ACCAAAAATG TGATGAGACT AGATTTGATC ATTTGCATTA AAAAAATATT 77661 .......... .......... .......... .......... .......... .......... 286 TGGGAATTAA ATCAAATAGC ATGTAAAAAT ATCTCAAATT TATGATTGAA TTATTTTGCA 77721 .......... .......... .......... .......... .......... .......... 286 GAATATATCT GTATATTTAT TATCATTAGA TTATGGATTA AAATGTTCGA TTCTTTTATA 77781 .......... .......... .......... .......... .......... .......... 286 TAGTACAAAT CCAAATTAAC ATAACATCCC CTACAATTCA CTAGAGTATG AGAAATTATA 77841 .......... .......... .......... .......... .......... .......... 286 AATAAATAAT TTATTTTTAG TTTGTAGTTT TAATACAATA TGAAATAAAA TAACTTACTA 77901 .......... .......... .......... .......... .......... .......... 286 ATTATAATCA TTCAATGGAA CATGTCATAG TGTGAATGTG TTGCTACGTG TTCTTGTTTT 77961 .......... .......... .......... .......... .......... .......... 286 TTGTTTCGAT TCGATAATTG ATATTCAAAT TAGAATTTAA TAAATTTAAA TTTATATTTT 78021 .......... .......... .......... .......... .......... .......... 286 ATAAAATTTA TTTAGGTAAA TATTTCCTAC TAAAAATGGG TCATTGTTTG TTATTGTCCA 78081 .......... .......... .......... .......... .......... .......... 286 ATATGAGAGG CATAATGGCA AATCACAATA AATGAAAATC ATTTATGATG AACTTAGATG 78141 .......... .......... .......... .......... .......... .......... 286 CTCTTTTTTA GTTAGAGGGG TTTTAATTGA GCTAAAGGTT GGTCAAATTT ATTTTAAAAT 78201 .......... .......... .......... .......... .......... .......... 286 TAATTTTTGA CTTTTGAAAA TGCTTGACAA ATATGCAAGG TAATAATTTA AAGTAAGTTA 78261 .......... .......... .......... .......... .......... .......... 286 AAAATGATAT TGAATAAGTT AGAAAGTGTT TGACCATGTT AAAAAGTAAC TTAAGATTAG 78321 .......... .......... .......... .......... .......... .......... 286 TAAAAATAAC TTAAAATAAG TTACAAACCA AAAATAGATC GCTCATACTT TTTATGTTTG 78381 .......... .......... .......... .......... .......... .......... 286 ACTTAAAAAT TATTTTAGTT TGACTTTTTG TTTTTGACTT AAAAATTATA TTTTTTTAAA 78441 .......... .......... .......... .......... .......... .......... 286 GTTAATTCAA ACTCGCTCAT TTTAATAGCC TCAAATAAAT ATGAGATTTC TTTTACGATT 78501 .......... .......... .......... .......... .......... .......... 286 GTTTGGTTCG AAGACAAGTT ATATGGTTAA TCTCTGATAT TAACTTTTAT TGACTTTGAT 78561 .......... .......... .......... .......... .......... .......... 286 TTATTATATT AAAATAACAT GATATTTTCT ATCATATTTA ATAGGGAAAA AAAAGTCTGA 78621 .......... .......... .......... .......... .......... .......... 286 AATTCTTGGG ATTATTTTTA ATTATTATTT TATCTCAAAA CTAATACTAT TATTCCACCA 78681 .......... .......... .......... .......... .......... .......... 286 TGTCTCAAAG ATAACTCATT CCAATATTAT TTAATAATCT TATTTATTAC ATTCCAAACG 78741 .......... .......... .......... .......... .......... .......... 286 TATAGACAAC AAACTTTTCT TTTTTCTGTA ACCTTTTGTT TTGTGGAGAA ATTGAATGGT 78801 .......... .......... .......... .......... .......... .......... 286 AATTGTATGG AAGATCCTTG TAATGGGCCT ATGGAAATCT TGAAGCTAGT GTTTGACTAC 78861 .......... .......... .......... .......... .......... .......... 286 TTCAAAGGCA AATATTATCT TGTTTTTGTT TTTTGTTTTT GTTTTTTTCT CTTTGATCGT 78921 .......... .......... .......... .......... .......... .......... 286 AAACGTGGAA CTTGAACCTA ACTCAGTCTC AAAAGTTTGT TAATGAGGTG AGTATTTTTC 78981 .......... .......... .......... .......... .......... .......... 286 AAGTGGATAT AAAAAGATTA AATTTCTATC ACTTTTCTGT TGTAGGAATT TATAACATTG 79041 .......... .......... .......... .......... .......... .......... 286 CCCCACACGA TACCATGAAA AGATTAATAT GATCTAACCT AACCTCAAAA GTTAGCTCAT 79101 .......... .......... .......... .......... .......... .......... 286 AAAGTGAGAA TTGTTACATG ATTTGGGTCT AACCTAAAGT AAGGATTGTT ACGTTCAAGT 79161 .......... .......... .......... .......... .......... .......... 286 TCATACAAGG AGAATTCTTA ACATTGACGC CATTGATAAA TATATAAATA AATAAGCAAT 79221 .......... .......... .......... .......... .......... .......... 286 AAAATTATGC TTTTAGTGGT TCACTTTCCA CATATAATAA TATATGATTA AAAGAAAAGG 79281 .......... .......... .......... .......... .......... .......... 286 GAAATCGTCT AATCCTATCA TTTTATGTGG AAAAAATCAC TTTGAAATCT CTATGCTTGA 79341 .......... .......... .......... .......... .......... .......... 286 TTTCGACCAA AAAAAAAAAA AAGAAATATT AAACTAATAT ATATCTTATT TTTTCGATTC 79401 .......... .......... .......... .......... .......... .......... 286 TTAGTATTAA ATAATTAAAT AAAATAATAA CAAATAAATT TAGAATTTCA AAGTATTGTT 79461 .......... .......... .......... .......... .......... .......... 286 AACAAAGTTA ATTTAATAAC ATACATTTCT AACTAAAATT TTCTTTAAAA TATATATCAA 79521 .......... .......... .......... .......... .......... .......... 286 ATATTAATAC TTTATAAAAT AGAGTAAATA TTTATCAATC GTCTTTTCAC TTTTTTTCTT 79581 .......... .......... .......... .......... .......... .......... 286 GGCCTCTTGT GGAAAAATTC TTGACTTATC AGTACAACCT TCTACTTAGG AATCTTGATG 79641 .......... .......... .......... .......... .......... .......... 286 TTAAATCATC AACTAATAGA ATGATTAAGA AAATGATGGA ATGAGGGGAC TTTTTAAAAA 79701 .......... .......... .......... .......... .......... .......... 286 AATTTAATGC TTGGTTGGTT ACTGAATTAA AAAATATTTT TTTGCGAATC TAATTTAATC 79761 .......... .......... .......... .......... .......... .......... 286 TTTTAAAATA AAAAAAAATT TAGTAAAAAC TAAATTTGAT ATAATTGATT TTCTCCTTTA 79821 .......... .......... .......... .......... .......... .......... 286 AAATGTAATT TTTTCAAAAG TTTTTTTTGT TTCTAAAAGA AAAAAAATCA AAAGTTTCGG 79881 .......... .......... .......... .......... .......... .......... 286 CCATATGACA AAATTCAAAT ATTTTTTGGG GGAAAACATT TTGAAAAAAT AATATTATTT 79941 .......... .......... .......... .......... .......... .......... 286 TCTCATTGCT CATCGTTATT GCAAGTGTAT CAGCTCGTTA CTTCCTAGAA AGAATTGATG 80001 .......... .......... .......... .......... .......... .......... 286 AAGAAAAAAA AAACGGCGTG GGCCTCGTTA ATTAATTTTC AAATGGTTGG CCACTATATA 80061 .......... .......... .......... .......... .......... .......... 286 TTAGTAGGTC ACATTTATCC TATTCAAGTT TTTTCCTTCT TCTTTACGTT AAATCCAAAC 80121 .......... .......... .......... .......... .......... .......... 286 ATATCGTTTT AGCTCGGTCT CAATTGATAT GACATATTTT TTATTTAATC AGTTTAAATT 80181 .......... .......... .......... .......... .......... .......... 286 AAAAAAATAT CATCTTTAAT ATATTTAAAA ATAATTTCAA CATTTTTATT TAGATCGTAT 80241 .......... .......... .......... .......... .......... .......... 286 ATAATTATAA TTATGACTAA TGAAATAATT AAATTTAACC TGAAGTCTCA TATTCAAACT 80301 .......... .......... .......... .......... .......... .......... 286 TTTGGTAGAA TTATAATTTT TCAAATAGAT TTTATAGTGT ACAATTTAAA TTTAATCAAA 80361 .......... .......... .......... .......... .......... .......... 286 TTTCAATATA AATATCGAAC GTGAGGAGTA ACTAAACGTT TACATTTCAA GTCCACCTAA 80421 .......... .......... .......... .......... .......... .......... 286 ACTTTTTCCA CATGCGAAGT TGCATGGGTG CATCGTCCCT CGTATTATTA AAATAGCCAT 80481 .......... .......... .......... .......... .......... .......... 286 CAAATTGCAT CATACAAACT ATATTATATA TCTTTTAATT TCCTTTTCTT AAAAAAAAAA 80541 .......... .......... .......... .......... .......... .......... 286 ATTTTTGGTC GATGGAAATT ACTATCATAT CAGCTCAAGG TCTCAAGAAC ACCACCACCT 80601 .......... .......... .......... .......... .......... .......... 286 GGCCGTGGCG GTTCCGCCCT TTCGCCACCC TCTCCACCGT CTCCGCCACC TCCACGAATG 80661 .......... .......... .......... .......... .......... .......... 286 AACTTCATAT AACTAGTGTT GATGAAACAA TACGTAACAA CAACATCGAT AATAATTATA 80721 .......... .......... .......... .......... .......... .......... 286 ATGCTATGTG GGGCGATAAA TTTCATCTAT CTATCGATGC TAGTCTATTT TTACATGGAC 80781 .......... .......... .......... .......... .......... .......... 286 ATTTATGTAT ATACATTCGA ATATATTCTA AAAATTTTCT TAAGGGTCGG AGTGAACTAG 80841 .......... .......... .......... .......... .......... .......... 286 GGTGGTGTAT GATTTCGGCG GCCGACGTAT TCAACGGGTT ACTTCCGGCG GGTTTTCTCC 80901 .......... .......... .......... .......... .......... .......... 286 GGCAATTTAG CTATAGGCTA CGGAATAAAG ATGGTTCAAG AGGTAACGGA GTTGTCAATG 80961 .......... .......... .......... .......... .......... .......... 286 TTGCCGTTAA ATTGGGTACT TCGTTTGTTT TGGGAATGCA TCCTCAACGA TCACCGTTAG 81021 .......... .......... .......... .......... .......... .......... 286 TGACGTATTT ACCGAAGGTG AGTGAGTACT CGCCGGTTCT TGGAATTCCG CTGATGGCAT 81081 .......... .......... .......... .......... .......... .......... 286 CATCGACAAA TATGTTGTAA GACAAATGAA CGATATCATA TTATTTAAGT TACATACGTT 81141 .......... .......... .......... .......... .......... .......... 286 GACAGTAAAG GACATTGTCA TTATATATAA ATTATCTAAA AAAAGTTTGT GGAATGCTAT 81201 .......... .......... .......... .......... .......... .......... 286 GTTTGTTAGA CTTTAAAAGC TTATTTGTTT GGAGAAAATC GTGAATTTTA ATTGATCATC 81261 .......... .......... .......... .......... .......... .......... 286 GTTAATGACA TATTTACAGA AGGTGAGTAA GTACTCGCCG ATTTTTGGAA TTCCGATGAT 81321 .......... .......... .......... .......... .......... .......... 286 GGCATCATCA ACAAATATGT TGTAAGACAA ATGAACGATA TTGTATTATT TGTGTTATAT 81381 .......... .......... .......... .......... .......... .......... 286 ATGTTGACAG TAAAGAATAT TCTCACTATA TATAAATTAT CTAAAAAGAA TTTGTGGAAT 81441 .......... .......... .......... .......... .......... .......... 286 GATATGTTTC TTGACTTTAA AAGTTTATTT CTTTGGAGAA AATGGTGAAT TTTAATTTGT 81501 .......... .......... .......... .......... .......... .......... 286 CGATGATTAG TTTGTGATAA TTAATGTTGT TGTTCTCATT TGATCATTAA ATAGTTCCTT 81561 .......... .......... .......... .......... .......... .......... 286 TTTTAGGGGG TTTTAGTTAC ACTTTAATTT GTTTATAATT AATTCTCTTA ATTATGCCTT 81621 .......... .......... .......... .......... .......... .......... 286 TTAAAACATT AATTGAAACT AAAAAAAAAT CAACTTTTTA GTTTCATTTC TTTTAAGGAT 81681 .......... .......... .......... .......... .......... .......... 286 ACATCTTATA TTAAATTCAT TTTCTATAAT AATTAGAGTA AGGGCCGTTT GGATGGGCTT 81741 || || |||||| |||||| | | .......... .......... .......... ......CTTA GGGCCCGTTT GGATGGAC-T 309 AATAAAAGTA GCTTTAAAAA AGTACTTTTA AAAGTGCTGA AACTTATTTT TAAAATAAGC 81801 | || ||||||||| |||||||||| || --T---AG-- -CTTTAAAAA AGTACTTTTA AA........ .......... .......... 333 AG--TTATGC GTTTGGATAA AAGTGCTGAA GTTGTTATGT CAAACGTGAA AAGAGAAAAA 81859 |||||| ||||||||| ||||| |||| |||| |||| |||||||||| || |||||| ..AGTTATGC ATTTGGATAA AAGTGTTGAA GTTGCTATGC CAAACGTGAA AATGGAAAAA 391 TGGAAGAAAG AAATGTTAGG GTTATATGGA TAATTTGGAG ATTGTATAAA AATATTAAGA 81919 |||||||||| | ||||||| ||||| |||| |||||||||| |||||||||| ||||||||| TGGAAGAAAG AGATGTTAGA GTTATGTGGA TAATTTGGAG ATTGTATAAA AATATTAAGG 451 GCAAAAAGAT AAAAATGTGG TCAACTTAAA ACAGCTTATA AGCTAAAAAA AAAGCACCCC 81979 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAAAAAGAT AAAAATGTGG TCAACTTAAA ACAGCTTATA AGCTAAAAAA AAAGCACCCC 511 TA-CCCAGCT TTTAACTTTT GGCTTAAAAT AAG---TTTT TTTTAACTTA AAATAAGTTA 82035 || ||||||| |||||||||| |||||||||| ||| |||| |||||||||| |||||||||| TACCCCAGCT TTTAACTTTT GGCTTAAAAT AAGTTTTTTT TTTTAACTTA AAATAAGTTA 571 TTTTGAGTA 82044 ||||||||| TTTTGAGTA 580 hqPGS_C08HBa0235H18.1+_SGN-E204223+ (81718 81773,81804 82044) ******************************************************************************** EST sequence 213 +strand 554 n (File: SGN-E374844+) 1 ATGGTCTTCT TTGGTTAGGA GGGCCAATAA AAATTGAAAT GAAAACAGGA AGGAAAGATA 61 GCAAGGAAAC TTACTTTTCA GAAGTTGAGA AGTACCTCCC TAATCACAAC GATTCAATCT 121 CATCTGTGCT TTCAAGATTT CAATCAATTG GTGTTGATAC TGAAGGAACT GTTGCTCTAC 181 TTGGTAATCA ACTCTCTAAA CTCTCGTTTA ATCATAAATT TTTTAAAAAT AATTAATTAT 241 ACAAAATTAT GTTTATTTTG ATCGAAAAAT TCATGTAGAG TTCATTCTTA GGGCCCGTTT 301 GGATGGACTT AGCTTTAAAA AAGTACTTTT AAAAGTTATG CATTTGGATA AAAGTGTTGA 361 AGTTGCTATG CCAAACGTGA AAATGGAAAA ATGGAAGAAA GAGATGTTAG AGTTATGTGG 421 ATAATTTGGA GATTGTATAA AAATATTAAG GGCAAAAAGA TAAAAATGTG GTCAACTTAA 481 AACAGCTTAT AAGCTAAAAA AAAAGCACCC CTACCCCAGC TTTTAACTTT TGGCTTAATA 541 TAAGTTTTTT TTTT Predicted gene structure (within gDNA segment 76204 to 82775): Exon 1 77063 77091 ( 29 n); cDNA 257 286 ( 30 n); score: 0.638 Intron 1 77092 81717 (4626 n); Pd: 0.000 (s: 0), Pa: 0.663 (s: 0.72) Exon 2 81718 81773 ( 56 n); cDNA 287 333 ( 47 n); score: 0.750 Intron 2 81774 81803 ( 30 n); Pd: 0.000 (s: 0.78), Pa: 0.765 (s: 0.81) ?? Exon 3 81804 82019 ( 216 n); cDNA 334 552 ( 219 n); score: 0.914 MATCH C08HBa0235H18.1+ SGN-E374844+ 0.881 301 0.543 C PGS_C08HBa0235H18.1+_SGN-E374844+ (77063 77091,81718 81773,81804 82019) Alignment (genomic DNA sequence = upper lines): TTCCATTGAA TAATTAAAG- AGAGTTAAAT GGGGGAGTAG AACCTAGTTA GAGATGAAAT 77121 || || ||| |||| | | |||||| | | TTTGATCGAA AAATTCATGT AGAGTTCATT .......... .......... .......... 286 TATCAAATAT TTTGTAACTT TATTTAAAGA AAAAAAAAAG AAAAGGGAAG TACGTTAACA 77181 .......... .......... .......... .......... .......... .......... 286 AAAAAAAAGA TAAATTATAT GTAGACTATA AATTAAATTG AGTCGTCAAA GAAGTAACAC 77241 .......... .......... .......... .......... .......... .......... 286 AGACAATTAA ATATAATTAC ACCTCCATTT ATTTGTCAAA ATCCTTGACC ACACTTTTAT 77301 .......... .......... .......... .......... .......... .......... 286 GAAACTGATA TAATTATTCT CTTGTCTTAA AATATTTATT GTATTTTTCA CTTTTGAACA 77361 .......... .......... .......... .......... .......... .......... 286 CTTTAAATGA AACATTAATT TAAAGAAACA TTTAGCTTTT ATTTATTCAT TTATATTTTG 77421 .......... .......... .......... .......... .......... .......... 286 AGATATAATT TCTTTTTATA TCTATCATAA TTGTAGTCTT CAAATATCAT ATTACCATTA 77481 .......... .......... .......... .......... .......... .......... 286 AAAGCACGAC GTGAAAAAAA ATTATAATTT GCCTTAGACT TCTTAAATGA CAAATATTTT 77541 .......... .......... .......... .......... .......... .......... 286 GTTGAGACAA TTATTTTTGG TAAAAAGATA ACATGTCTGA TTATTTTTAG TTTTGAACAT 77601 .......... .......... .......... .......... .......... .......... 286 TCCTCTACTC ACCAAAAATG TGATGAGACT AGATTTGATC ATTTGCATTA AAAAAATATT 77661 .......... .......... .......... .......... .......... .......... 286 TGGGAATTAA ATCAAATAGC ATGTAAAAAT ATCTCAAATT TATGATTGAA TTATTTTGCA 77721 .......... .......... .......... .......... .......... .......... 286 GAATATATCT GTATATTTAT TATCATTAGA TTATGGATTA AAATGTTCGA TTCTTTTATA 77781 .......... .......... .......... .......... .......... .......... 286 TAGTACAAAT CCAAATTAAC ATAACATCCC CTACAATTCA CTAGAGTATG AGAAATTATA 77841 .......... .......... .......... .......... .......... .......... 286 AATAAATAAT TTATTTTTAG TTTGTAGTTT TAATACAATA TGAAATAAAA TAACTTACTA 77901 .......... .......... .......... .......... .......... .......... 286 ATTATAATCA TTCAATGGAA CATGTCATAG TGTGAATGTG TTGCTACGTG TTCTTGTTTT 77961 .......... .......... .......... .......... .......... .......... 286 TTGTTTCGAT TCGATAATTG ATATTCAAAT TAGAATTTAA TAAATTTAAA TTTATATTTT 78021 .......... .......... .......... .......... .......... .......... 286 ATAAAATTTA TTTAGGTAAA TATTTCCTAC TAAAAATGGG TCATTGTTTG TTATTGTCCA 78081 .......... .......... .......... .......... .......... .......... 286 ATATGAGAGG CATAATGGCA AATCACAATA AATGAAAATC ATTTATGATG AACTTAGATG 78141 .......... .......... .......... .......... .......... .......... 286 CTCTTTTTTA GTTAGAGGGG TTTTAATTGA GCTAAAGGTT GGTCAAATTT ATTTTAAAAT 78201 .......... .......... .......... .......... .......... .......... 286 TAATTTTTGA CTTTTGAAAA TGCTTGACAA ATATGCAAGG TAATAATTTA AAGTAAGTTA 78261 .......... .......... .......... .......... .......... .......... 286 AAAATGATAT TGAATAAGTT AGAAAGTGTT TGACCATGTT AAAAAGTAAC TTAAGATTAG 78321 .......... .......... .......... .......... .......... .......... 286 TAAAAATAAC TTAAAATAAG TTACAAACCA AAAATAGATC GCTCATACTT TTTATGTTTG 78381 .......... .......... .......... .......... .......... .......... 286 ACTTAAAAAT TATTTTAGTT TGACTTTTTG TTTTTGACTT AAAAATTATA TTTTTTTAAA 78441 .......... .......... .......... .......... .......... .......... 286 GTTAATTCAA ACTCGCTCAT TTTAATAGCC TCAAATAAAT ATGAGATTTC TTTTACGATT 78501 .......... .......... .......... .......... .......... .......... 286 GTTTGGTTCG AAGACAAGTT ATATGGTTAA TCTCTGATAT TAACTTTTAT TGACTTTGAT 78561 .......... .......... .......... .......... .......... .......... 286 TTATTATATT AAAATAACAT GATATTTTCT ATCATATTTA ATAGGGAAAA AAAAGTCTGA 78621 .......... .......... .......... .......... .......... .......... 286 AATTCTTGGG ATTATTTTTA ATTATTATTT TATCTCAAAA CTAATACTAT TATTCCACCA 78681 .......... .......... .......... .......... .......... .......... 286 TGTCTCAAAG ATAACTCATT CCAATATTAT TTAATAATCT TATTTATTAC ATTCCAAACG 78741 .......... .......... .......... .......... .......... .......... 286 TATAGACAAC AAACTTTTCT TTTTTCTGTA ACCTTTTGTT TTGTGGAGAA ATTGAATGGT 78801 .......... .......... .......... .......... .......... .......... 286 AATTGTATGG AAGATCCTTG TAATGGGCCT ATGGAAATCT TGAAGCTAGT GTTTGACTAC 78861 .......... .......... .......... .......... .......... .......... 286 TTCAAAGGCA AATATTATCT TGTTTTTGTT TTTTGTTTTT GTTTTTTTCT CTTTGATCGT 78921 .......... .......... .......... .......... .......... .......... 286 AAACGTGGAA CTTGAACCTA ACTCAGTCTC AAAAGTTTGT TAATGAGGTG AGTATTTTTC 78981 .......... .......... .......... .......... .......... .......... 286 AAGTGGATAT AAAAAGATTA AATTTCTATC ACTTTTCTGT TGTAGGAATT TATAACATTG 79041 .......... .......... .......... .......... .......... .......... 286 CCCCACACGA TACCATGAAA AGATTAATAT GATCTAACCT AACCTCAAAA GTTAGCTCAT 79101 .......... .......... .......... .......... .......... .......... 286 AAAGTGAGAA TTGTTACATG ATTTGGGTCT AACCTAAAGT AAGGATTGTT ACGTTCAAGT 79161 .......... .......... .......... .......... .......... .......... 286 TCATACAAGG AGAATTCTTA ACATTGACGC CATTGATAAA TATATAAATA AATAAGCAAT 79221 .......... .......... .......... .......... .......... .......... 286 AAAATTATGC TTTTAGTGGT TCACTTTCCA CATATAATAA TATATGATTA AAAGAAAAGG 79281 .......... .......... .......... .......... .......... .......... 286 GAAATCGTCT AATCCTATCA TTTTATGTGG AAAAAATCAC TTTGAAATCT CTATGCTTGA 79341 .......... .......... .......... .......... .......... .......... 286 TTTCGACCAA AAAAAAAAAA AAGAAATATT AAACTAATAT ATATCTTATT TTTTCGATTC 79401 .......... .......... .......... .......... .......... .......... 286 TTAGTATTAA ATAATTAAAT AAAATAATAA CAAATAAATT TAGAATTTCA AAGTATTGTT 79461 .......... .......... .......... .......... .......... .......... 286 AACAAAGTTA ATTTAATAAC ATACATTTCT AACTAAAATT TTCTTTAAAA TATATATCAA 79521 .......... .......... .......... .......... .......... .......... 286 ATATTAATAC TTTATAAAAT AGAGTAAATA TTTATCAATC GTCTTTTCAC TTTTTTTCTT 79581 .......... .......... .......... .......... .......... .......... 286 GGCCTCTTGT GGAAAAATTC TTGACTTATC AGTACAACCT TCTACTTAGG AATCTTGATG 79641 .......... .......... .......... .......... .......... .......... 286 TTAAATCATC AACTAATAGA ATGATTAAGA AAATGATGGA ATGAGGGGAC TTTTTAAAAA 79701 .......... .......... .......... .......... .......... .......... 286 AATTTAATGC TTGGTTGGTT ACTGAATTAA AAAATATTTT TTTGCGAATC TAATTTAATC 79761 .......... .......... .......... .......... .......... .......... 286 TTTTAAAATA AAAAAAAATT TAGTAAAAAC TAAATTTGAT ATAATTGATT TTCTCCTTTA 79821 .......... .......... .......... .......... .......... .......... 286 AAATGTAATT TTTTCAAAAG TTTTTTTTGT TTCTAAAAGA AAAAAAATCA AAAGTTTCGG 79881 .......... .......... .......... .......... .......... .......... 286 CCATATGACA AAATTCAAAT ATTTTTTGGG GGAAAACATT TTGAAAAAAT AATATTATTT 79941 .......... .......... .......... .......... .......... .......... 286 TCTCATTGCT CATCGTTATT GCAAGTGTAT CAGCTCGTTA CTTCCTAGAA AGAATTGATG 80001 .......... .......... .......... .......... .......... .......... 286 AAGAAAAAAA AAACGGCGTG GGCCTCGTTA ATTAATTTTC AAATGGTTGG CCACTATATA 80061 .......... .......... .......... .......... .......... .......... 286 TTAGTAGGTC ACATTTATCC TATTCAAGTT TTTTCCTTCT TCTTTACGTT AAATCCAAAC 80121 .......... .......... .......... .......... .......... .......... 286 ATATCGTTTT AGCTCGGTCT CAATTGATAT GACATATTTT TTATTTAATC AGTTTAAATT 80181 .......... .......... .......... .......... .......... .......... 286 AAAAAAATAT CATCTTTAAT ATATTTAAAA ATAATTTCAA CATTTTTATT TAGATCGTAT 80241 .......... .......... .......... .......... .......... .......... 286 ATAATTATAA TTATGACTAA TGAAATAATT AAATTTAACC TGAAGTCTCA TATTCAAACT 80301 .......... .......... .......... .......... .......... .......... 286 TTTGGTAGAA TTATAATTTT TCAAATAGAT TTTATAGTGT ACAATTTAAA TTTAATCAAA 80361 .......... .......... .......... .......... .......... .......... 286 TTTCAATATA AATATCGAAC GTGAGGAGTA ACTAAACGTT TACATTTCAA GTCCACCTAA 80421 .......... .......... .......... .......... .......... .......... 286 ACTTTTTCCA CATGCGAAGT TGCATGGGTG CATCGTCCCT CGTATTATTA AAATAGCCAT 80481 .......... .......... .......... .......... .......... .......... 286 CAAATTGCAT CATACAAACT ATATTATATA TCTTTTAATT TCCTTTTCTT AAAAAAAAAA 80541 .......... .......... .......... .......... .......... .......... 286 ATTTTTGGTC GATGGAAATT ACTATCATAT CAGCTCAAGG TCTCAAGAAC ACCACCACCT 80601 .......... .......... .......... .......... .......... .......... 286 GGCCGTGGCG GTTCCGCCCT TTCGCCACCC TCTCCACCGT CTCCGCCACC TCCACGAATG 80661 .......... .......... .......... .......... .......... .......... 286 AACTTCATAT AACTAGTGTT GATGAAACAA TACGTAACAA CAACATCGAT AATAATTATA 80721 .......... .......... .......... .......... .......... .......... 286 ATGCTATGTG GGGCGATAAA TTTCATCTAT CTATCGATGC TAGTCTATTT TTACATGGAC 80781 .......... .......... .......... .......... .......... .......... 286 ATTTATGTAT ATACATTCGA ATATATTCTA AAAATTTTCT TAAGGGTCGG AGTGAACTAG 80841 .......... .......... .......... .......... .......... .......... 286 GGTGGTGTAT GATTTCGGCG GCCGACGTAT TCAACGGGTT ACTTCCGGCG GGTTTTCTCC 80901 .......... .......... .......... .......... .......... .......... 286 GGCAATTTAG CTATAGGCTA CGGAATAAAG ATGGTTCAAG AGGTAACGGA GTTGTCAATG 80961 .......... .......... .......... .......... .......... .......... 286 TTGCCGTTAA ATTGGGTACT TCGTTTGTTT TGGGAATGCA TCCTCAACGA TCACCGTTAG 81021 .......... .......... .......... .......... .......... .......... 286 TGACGTATTT ACCGAAGGTG AGTGAGTACT CGCCGGTTCT TGGAATTCCG CTGATGGCAT 81081 .......... .......... .......... .......... .......... .......... 286 CATCGACAAA TATGTTGTAA GACAAATGAA CGATATCATA TTATTTAAGT TACATACGTT 81141 .......... .......... .......... .......... .......... .......... 286 GACAGTAAAG GACATTGTCA TTATATATAA ATTATCTAAA AAAAGTTTGT GGAATGCTAT 81201 .......... .......... .......... .......... .......... .......... 286 GTTTGTTAGA CTTTAAAAGC TTATTTGTTT GGAGAAAATC GTGAATTTTA ATTGATCATC 81261 .......... .......... .......... .......... .......... .......... 286 GTTAATGACA TATTTACAGA AGGTGAGTAA GTACTCGCCG ATTTTTGGAA TTCCGATGAT 81321 .......... .......... .......... .......... .......... .......... 286 GGCATCATCA ACAAATATGT TGTAAGACAA ATGAACGATA TTGTATTATT TGTGTTATAT 81381 .......... .......... .......... .......... .......... .......... 286 ATGTTGACAG TAAAGAATAT TCTCACTATA TATAAATTAT CTAAAAAGAA TTTGTGGAAT 81441 .......... .......... .......... .......... .......... .......... 286 GATATGTTTC TTGACTTTAA AAGTTTATTT CTTTGGAGAA AATGGTGAAT TTTAATTTGT 81501 .......... .......... .......... .......... .......... .......... 286 CGATGATTAG TTTGTGATAA TTAATGTTGT TGTTCTCATT TGATCATTAA ATAGTTCCTT 81561 .......... .......... .......... .......... .......... .......... 286 TTTTAGGGGG TTTTAGTTAC ACTTTAATTT GTTTATAATT AATTCTCTTA ATTATGCCTT 81621 .......... .......... .......... .......... .......... .......... 286 TTAAAACATT AATTGAAACT AAAAAAAAAT CAACTTTTTA GTTTCATTTC TTTTAAGGAT 81681 .......... .......... .......... .......... .......... .......... 286 ACATCTTATA TTAAATTCAT TTTCTATAAT AATTAGAGTA AGGGCCGTTT GGATGGGCTT 81741 || || |||||| |||||| | | .......... .......... .......... ......CTTA GGGCCCGTTT GGATGGAC-T 309 AATAAAAGTA GCTTTAAAAA AGTACTTTTA AAAGTGCTGA AACTTATTTT TAAAATAAGC 81801 | || ||||||||| |||||||||| || --T---AG-- -CTTTAAAAA AGTACTTTTA AA........ .......... .......... 333 AG--TTATGC GTTTGGATAA AAGTGCTGAA GTTGTTATGT CAAACGTGAA AAGAGAAAAA 81859 |||||| ||||||||| ||||| |||| |||| |||| |||||||||| || |||||| ..AGTTATGC ATTTGGATAA AAGTGTTGAA GTTGCTATGC CAAACGTGAA AATGGAAAAA 391 TGGAAGAAAG AAATGTTAGG GTTATATGGA TAATTTGGAG ATTGTATAAA AATATTAAGA 81919 |||||||||| | ||||||| ||||| |||| |||||||||| |||||||||| ||||||||| TGGAAGAAAG AGATGTTAGA GTTATGTGGA TAATTTGGAG ATTGTATAAA AATATTAAGG 451 GCAAAAAGAT AAAAATGTGG TCAACTTAAA ACAGCTTATA AGCTAAAAAA AAAGCACCCC 81979 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAAAAAGAT AAAAATGTGG TCAACTTAAA ACAGCTTATA AGCTAAAAAA AAAGCACCCC 511 TA-CCCAGCT TTTAACTTTT GGCTTAAAAT AAGTTTTTTT T 82019 || ||||||| |||||||||| ||||||| || |||||||||| | TACCCCAGCT TTTAACTTTT GGCTTAATAT AAGTTTTTTT T 552 hqPGS_C08HBa0235H18.1+_SGN-E374844+ (81718 81773,81804 82019) ******************************************************************************** EST sequence 407 +strand 812 n (File: SGN-E546063+) 1 GGGCCCCCCT CGAGTTTTTT TTTTTTTTTT ATTTTTAAAA TAAGCAGTTA TGTGTTTGGA 61 TAAAAGTGCT GAATTTGTTA TGCCAAACGT GAAAAGAGAA AAATAGAAGA AAGAGATTAT 121 TACATTGGTC CAACAATCAA AAGCTAGAAG ACAGAAATTG AAATACAAAA TACTATTCCA 181 AAATCATAAA ATCTTGGATT CATATAATAC TAAATCACAA TTTTGCCTCT ACGATTCATC 241 GGTAGGAGAT GATAATTTGA AATTTCTATT TTTTTTTTCT TCAGAAAGCA ACTTTGCAAA 301 CTCTTTCAAA GCTTCTTCAT TTGTGCCACC ATCTTTTTTG CATTGTTCAA ATAGGCCTGT 361 TTGTAGATTT ACCCTTGAAA CTGGTTTCTT CAATAAATTT GTACCAATTT CAACCAATTT 421 GTTCATGTTT TCTTTGGTTG ATATGTCAAC AGTGGAGTCT GCTCCACTTA ATGTATCATC 481 CTGAATACGA AGATAATGTT TTTCAGAATG AACAGATTGG AAAACAACAG AAATATGATA 541 ATCAACCATA TCATCACTAG CATCAGCAAA TGCATCAATA ATTGGATTTG AGCCTCCACC 601 AGTTAGCCAT CCAAAAATAC CCCAATTTGA TGCAATTTTT GCATCATATT TATGTTCCAA 661 TTTTGCTGAT CCAGTCCCAA TAGAGATAAC CAAAAATTTC CCATAATTAG TGGGCTTCAT 721 TTCCTTGAAA TTTTTGAAAT ATGGGGTTTG TTCGAATATT TGTTTGGACG CTTCATTTAT 781 AGCAATTAAG GTCGGATTGT TAGCAGCGAT AG Predicted gene structure (within gDNA segment 80905 to 90150): Exon 1 81785 81873 ( 89 n); cDNA 29 117 ( 89 n); score: 0.944 Intron 1 81874 86112 (4239 n); Pd: 0.000 (s: 0.92), Pa: 0.000 (s: 0) Exon 2 86113 86131 ( 19 n); cDNA 118 136 ( 19 n); score: 0.789 Intron 2 86132 87802 (1671 n); Pd: 0.000 (s: 0), Pa: 0.703 (s: 0) Exon 3 87803 87809 ( 7 n); cDNA 137 143 ( 7 n); score: 0.714 Intron 3 87810 88203 ( 394 n); Pd: 0.900 (s: 0), Pa: 0.000 (s: 0) Exon 4 88204 88219 ( 16 n); cDNA 144 159 ( 16 n); score: 0.750 Intron 4 88220 88966 ( 747 n); Pd: 0.919 (s: 0), Pa: 0.000 (s: 0) Exon 5 88967 88997 ( 31 n); cDNA 160 190 ( 31 n); score: 0.710 PPA cDNA 28 14 MATCH C08HBa0235H18.1+ SGN-E546063+ 0.944 162 0.200 C PGS_C08HBa0235H18.1+_SGN-E546063+ (81785 81873,86113 86131,87803 87809,88204 88219,88967 88997) Alignment (genomic DNA sequence = upper lines): TTATTTTTAA AATAAGCAGT TATGCGTTTG GATAAAAGTG CTGAAGTTGT TATGTCAAAC 81844 |||||||||| |||||||||| |||| ||||| |||||||||| ||||| |||| |||| ||||| TTATTTTTAA AATAAGCAGT TATGTGTTTG GATAAAAGTG CTGAATTTGT TATGCCAAAC 88 GTGAAAAGAG AAAAATGGAA GAAAGAAATG TTAGGGTTAT ATGGATAATT TGGAGATTGT 81904 |||||||||| |||||| ||| |||||| || GTGAAAAGAG AAAAATAGAA GAAAGAGAT. .......... .......... .......... 117 ATAAAAATAT TAAGAGCAAA AAGATAAAAA TGTGGTCAAC TTAAAACAGC TTATAAGCTA 81964 .......... .......... .......... .......... .......... .......... 117 AAAAAAAAGC ACCCCTACCC AGCTTTTAAC TTTTGGCTTA AAATAAGTTT TTTTTAACTT 82024 .......... .......... .......... .......... .......... .......... 117 AAAATAAGTT ATTTTGAGTA TTGCCAAACA GCTAAACAAG TCAAAAATCA GCTTTTAAGT 82084 .......... .......... .......... .......... .......... .......... 117 CAGTTTGACC AGCTTTTAAG CTGAGCCAAA CAGGCTCTAA GAGTAATTCT AAGATCCATC 82144 .......... .......... .......... .......... .......... .......... 117 TTTATAGTAA ATATAATAAA AGATGTATAT TTAATTTGCT ATATCAAGTT GCATGCTAAT 82204 .......... .......... .......... .......... .......... .......... 117 AATTTTTCAT GTAACTAGTT TCACTTGTTA TTTTGGAAAA GTCGAGTGTA ATTATTTTTT 82264 .......... .......... .......... .......... .......... .......... 117 TCAAATTTAA TAATTAATAT GATGATAAAT TTTAAAAAAT TACTTTATCA ACTATAGAAA 82324 .......... .......... .......... .......... .......... .......... 117 TCGAAATTCT CTTATGTTAA ATTTTCTCCA TTCAAATTTC TTTTCAATTG TGTGATTTTT 82384 .......... .......... .......... .......... .......... .......... 117 AAAGCCAAAG GAATACTTGA ATAAGTGTGC AAATTATAGT TTTATCTTTC TTTTCACTTT 82444 .......... .......... .......... .......... .......... .......... 117 ATTTTTATGA TAGTTTAATC AGGTTATCGA TTTACTCATT ATTGTGTCAT AAGGTTACTT 82504 .......... .......... .......... .......... .......... .......... 117 TTATTTTAAA TTTGTATGGA AATGAGATGT ATAATTCAAG TTTTGTTAGT AAGATGGACG 82564 .......... .......... .......... .......... .......... .......... 117 AAATTACATA AGAGTTAATT GTCCAACTGT CCTACCTATA CATGGAAAAT TTTCCTTTTC 82624 .......... .......... .......... .......... .......... .......... 117 TTATCCAACA ACTAAAGAAG GAAAATTTGG AAACAAATTT TTCTGTTCTT TTAGTATTTA 82684 .......... .......... .......... .......... .......... .......... 117 TCCAATAAGG TCATATCATG TTAGAGCCAA TTATTAAATA TATATACTAG ACATCGGTAT 82744 .......... .......... .......... .......... .......... .......... 117 CTATTCACTG ATTCAATATC TGTTATTTTT TTATTTCAGT TTATGCGATA TAGATGGAAT 82804 .......... .......... .......... .......... .......... .......... 117 TAAATAGTAG ATTAAATTTT GACATGAATT TTAAAAAAAT TTAAGTAGTT GTTGTAATTT 82864 .......... .......... .......... .......... .......... .......... 117 ATAGTATTTT ACTGTAATTT TTAAATAATA TATATTACTT CTTTTGTCCC AATGTAAGTG 82924 .......... .......... .......... .......... .......... .......... 117 ATATCCCAAT GTAAGTGATA CCGATAGAAT TTCAAGAGTC AATCAAATGT TGTTAATTAT 82984 .......... .......... .......... .......... .......... .......... 117 TGAATTTACA ATATTTTCTA CGTAGTTTTC AAATTAAATA TTTAATGTTA CTTCTTTTGA 83044 .......... .......... .......... .......... .......... .......... 117 TTATTGTAAT TTATAGTAAT TTTTACGTAT TTTTTAATAA TATATGTTAC TTCTCTTATC 83104 .......... .......... .......... .......... .......... .......... 117 CCAATGTATG TAGCACAAAT AGAATTTCAA GAGTCAATCA AATGTTGTTA ATTATTGAGA 83164 .......... .......... .......... .......... .......... .......... 117 TTTACAATAT TTTCTATCGT AGTTTCCAAA TTAAATAATA CATGTTACTT CTTCTATCCT 83224 .......... .......... .......... .......... .......... .......... 117 TTTTATGTGA CATAGATAGA TTAATTTTAT GAATCAATCG AAATTTTTAT TTATTTTTTA 83284 .......... .......... .......... .......... .......... .......... 117 TAAATATTTT AAATTGTCAG TTAAAACATT TAAAATCAAG ACAAACAAAT TAAAACGGAA 83344 .......... .......... .......... .......... .......... .......... 117 GAACCACCGA AAAAGAAAAA ATAATGCAGC TGTCAGGTAG GGTCGACCAT GACCTCCCTG 83404 .......... .......... .......... .......... .......... .......... 117 GTTACTATCA CTTATATATA TAAAAAAAAA TTAAAATCAA GACAAACAAA TTAAAACGGA 83464 .......... .......... .......... .......... .......... .......... 117 AGAATCATAG AAAAAGGTAA ATAGTGTAGC TATCGCGCAA GCATGCATGT CGATCATGAC 83524 .......... .......... .......... .......... .......... .......... 117 CTGTCTGTTT GTTGTCACTT AAATATAATA AAATTTATAA ATCAAAACAA ACAAATTAAA 83584 .......... .......... .......... .......... .......... .......... 117 ACAAATAAAA AAATAAAAAT ATAAATGCCC ACCAGACATA TCAATCATGA CCTGCCTAGT 83644 .......... .......... .......... .......... .......... .......... 117 TATTGTCACT CGTATATGTG TAATTTCTTT CCTCTTTTTG CTTTTTCCTT CTATTTCATC 83704 .......... .......... .......... .......... .......... .......... 117 TAGAAGTTCC ATTCCTAATA TGTTACCAAA TTTTATTTTT AAAAAATAAT TATCACTGAA 83764 .......... .......... .......... .......... .......... .......... 117 ATGAGTTAAT TTGTGCAAAT TTCAATTATT TTGATTAAAT AACTACTATC TGCTATCCAA 83824 .......... .......... .......... .......... .......... .......... 117 AAATTGAATT ACACTTTTTG AAGGGATTTT ATTAAGAGTA AATTAACACA TGATAATAGT 83884 .......... .......... .......... .......... .......... .......... 117 TATGATAATT AAGATATATT GATTAACCTA TGTGGGATTA TACCTCTCAA TTATAATGCT 83944 .......... .......... .......... .......... .......... .......... 117 TTTTGACTAA CTTTTTTTTT TTGTTCTTTT AAATTCTTAC GTATTCCAAA CGGTTCTATC 84004 .......... .......... .......... .......... .......... .......... 117 CTCTAACACA AAATCCCACT TAAAAATCAG GAAAACTCAG AAAATAAAAA AATGCACATT 84064 .......... .......... .......... .......... .......... .......... 117 TTAATTATAT TGATCAATTA TTTAATCAAA TGAAGATAAT TATTTAGTAA CTATCTTCAT 84124 .......... .......... .......... .......... .......... .......... 117 TTATATTTTA ATTGTATTAG TGAGAAACAG AAAAAATAAT ATTACTAGTG TTTTTACACA 84184 .......... .......... .......... .......... .......... .......... 117 GGAAAATTAG TAAGCTTTTT AATATTTCGG TAAGAATACT TTTCTAGTGA GCTAATTCGA 84244 .......... .......... .......... .......... .......... .......... 117 CGAGAAAAAC TTTTATCATC TACATGTATT GTAGAAGAAA TATGGAAACT GCTAAGGAGG 84304 .......... .......... .......... .......... .......... .......... 117 TTCTGTAGGG TTACGATAAT TTGAAAAGTT TTAGGATTAT TACCAAAAGC AATCAATTAA 84364 .......... .......... .......... .......... .......... .......... 117 TCAGTTAGCT GCATGTCTCA ATCATAAACT AGTTATAGTG ATAAAATAAT TAATAGTCAA 84424 .......... .......... .......... .......... .......... .......... 117 CCATACTAAT AATTAATTAA TAAAATGAGA CCAAGAAATA AATTGAGCCT TTATATTAAC 84484 .......... .......... .......... .......... .......... .......... 117 GAACCTTCCT AGTGCTCACT TCTCAAATAT TAGAAGTTGC TAAGAAGAAA AATTAAGGAA 84544 .......... .......... .......... .......... .......... .......... 117 AAATTAATAC ACGTCTGGTG TTTCCCTTAT TTTTAATTTT TTATTTTATT TTTAAAATCT 84604 .......... .......... .......... .......... .......... .......... 117 CTAAAATTCC TTACGTCTTT AATGTATCCG AACTACATAT CAATGAATTT GAACCAACAT 84664 .......... .......... .......... .......... .......... .......... 117 TTAATGTATT CAAGCTACAT ATATATATAT TCATTTATTT TATAATGTAT CCGAGCTACA 84724 .......... .......... .......... .......... .......... .......... 117 TATTATGTAT CAGATCTAGT TTTAGTGTAT CCAAACTGCA TATGTGTGTA TTCAGTTTAT 84784 .......... .......... .......... .......... .......... .......... 117 GTTATAATGT ATCCGAGATA CCCTTTAATG TATCCAATTT GTATTACTTT TTAAGGGATT 84844 .......... .......... .......... .......... .......... .......... 117 AATGTAGTTA CAAAACTAAA TAGGAATAAA TTATGATTTT CATATTAAAA CTATGTGATT 84904 .......... .......... .......... .......... .......... .......... 117 CCTAAAACTT ATCCGAAAAA AGTCCACGAG AAGATCGCCA GGTCTCTTTC TGAGACAGTG 84964 .......... .......... .......... .......... .......... .......... 117 GCAAACTAGC TCAGACATCA TAATTATAAG AAAATAAGAT CGAGTTTATT TCAATATGAT 85024 .......... .......... .......... .......... .......... .......... 117 TAAAATATTC ATATTCTTAC TTAATTTAAA GACGTTATTT ACATCTTGAA AAACCTGCAA 85084 .......... .......... .......... .......... .......... .......... 117 AATTCTTATA TATTATCATA GCTTCCATAG TTAAGTGCTC TTAGTAAGGA ATGTGTAGCA 85144 .......... .......... .......... .......... .......... .......... 117 ATAGACTGTG AAAATGAAAT GTGCTGCCTC AATTACTATA ATTATTTTTG CAAGCATAGG 85204 .......... .......... .......... .......... .......... .......... 117 TTATGTTGTT ATTGCTAGTA TAAAGTTGCT CCATGTGTCT TAAATCACAT CTTTTATGGT 85264 .......... .......... .......... .......... .......... .......... 117 GCATTAATTA ACAAGGTAGG TAAGTTGAGA CTTCTATTTG AATTTTCTCA TATATAATGA 85324 .......... .......... .......... .......... .......... .......... 117 CATAAAATTT CAATAATGTG GATGCAAAGT AAGGACAGGC ATACATGATA TGTCACAATG 85384 .......... .......... .......... .......... .......... .......... 117 TTGATTTGCT AACTAGGTAT GAGATGTAGA TATACTATAA TCTGGGAATG TTACTTTTAC 85444 .......... .......... .......... .......... .......... .......... 117 TTTTATAGTT GAGACCCAGA GTTTACAACA TTGATCTACA TCTTCAAAGT TAGAAGCAAA 85504 .......... .......... .......... .......... .......... .......... 117 CATGACAAAA TTTTCTGAGA ATAATACTCC CAGAATGGAG TACCCTCTCA TTCTTCATTT 85564 .......... .......... .......... .......... .......... .......... 117 AAATGCAATT TGCATATATG CAACTTTTAA CGAGTACCTT TAATGGGCGA TATGCTGTTA 85624 .......... .......... .......... .......... .......... .......... 117 GGAAGGCGTC CATCATCACC ATCCCACTTG CCTAAAATCT GATGTTGCGT CTTGGATTTT 85684 .......... .......... .......... .......... .......... .......... 117 CTTCTTTAAA GATCTGAAAC TGCTACTGCT TTTGTCAGAC CAACGAAACG AAGCACTCCT 85744 .......... .......... .......... .......... .......... .......... 117 TTTAATGAGA TCTGCCATAA GTGGCGACTT CATAGAGGAA TCCTCCACTG CAGCCCCACT 85804 .......... .......... .......... .......... .......... .......... 117 GTACACTGCG CTCCAAAAAA AAAAATTGGA TTTCAGGAGG TGAAATATAT ACTTTATCAT 85864 .......... .......... .......... .......... .......... .......... 117 ATCAGCCTTT TGGGAAACCA TAACAAACTA AAAGGATTCG AAAGGGCACC TGACGATGGT 85924 .......... .......... .......... .......... .......... .......... 117 GGGAGGTGGT AATAGCGCTT CAAGAATTTT GAAGCTTCTC TCTCCTTCTT GTGACATAAA 85984 .......... .......... .......... .......... .......... .......... 117 ACGCGTATCA AGGTGTGTGC ATCTCCCAGA TGTCTGTGGC CATATTTATG TGCTTCAAGT 86044 .......... .......... .......... .......... .......... .......... 117 CCTGAACTGT GTTCACTAGA AGTCATCAAC AATTGGATCA CAGATTCAGC CTGCTACGAA 86104 .......... .......... .......... .......... .......... .......... 117 AACCAAAATA TTAAATAGGT CCCACAGCAT GCATACAGAA ACAGGCTAAA AGCTTTAATT 86164 || ||| || ||| || ||| ........TA TTACATTGGT CCAACAA... .......... .......... .......... 136 AATTCTTAAC AAACCCGGAG GGAAAATAAA CTGAGGATTT GATGAGCGAA TCTCGCTTCT 86224 .......... .......... .......... .......... .......... .......... 136 TCTTCAACTA GTGATCGGGG AAGCCCTTCT CCGTCAGCAA CGAACAAGTC CTAGAAAGTG 86284 .......... .......... .......... .......... .......... .......... 136 AAAGAAACAT AATTGTTGTT TCTCAAATAG TCGCTGAATA TCTCTTGCAA AAGATATCTA 86344 .......... .......... .......... .......... .......... .......... 136 AAATCCAAGC ATAATAGAAG CAAAAGATCC ATATAGGCAA ATATCAACTA GCTGAGTTAC 86404 .......... .......... .......... .......... .......... .......... 136 ATCACCAATG GATAAATTCA GTGTGGTCAG GACTCTTTAA GATCTGGTTA AAAAAATTTA 86464 .......... .......... .......... .......... .......... .......... 136 CCTTGGTTTC GGGGAAGTGT GAAATTCAGA AAACTTCTAT TATGAAAATA CAAGAAAAAT 86524 .......... .......... .......... .......... .......... .......... 136 TATTTAGTAT TGGAAATCAA GGAATTAAAA TAATTAGGAA ATGAAAGCAA AAGGTCAAAC 86584 .......... .......... .......... .......... .......... .......... 136 ACAATTAAAC CAGCCTACAA GAAAAAAATT GTCTAGAATA TTAAATTTCA ATGATCAGCC 86644 .......... .......... .......... .......... .......... .......... 136 ATATATCTTT TATAACTAAG AAATTCCCAA GGGACAATAT AGCGCATGGT TCAAAACTCT 86704 .......... .......... .......... .......... .......... .......... 136 GGATAATGAA CGCGGCTTTG TCAGGGTCCA AGTTCGAAAT ATGAACTGTG ACTAACACGC 86764 .......... .......... .......... .......... .......... .......... 136 ACATCATGCT TTACGCTCTT ACCACTAGAT CAAAGGCCTA GGGCCCAATG ACCAAAGCTA 86824 .......... .......... .......... .......... .......... .......... 136 ATACACCACA TTGTGGGCCA AAATTAGAGA TGAGGTTCGT CAATGCAGGC TTTTGGTTAC 86884 .......... .......... .......... .......... .......... .......... 136 TAAAAATAAC AATTATGGAA CTATAATAAA TAAGAGAACG AGAGACAAGG ATCATTAGCT 86944 .......... .......... .......... .......... .......... .......... 136 CAGAGAAAAG ATAACTTATT ACGAATCTAC ATAGTTACAG AAATCCTTGT CCTAGTTGAA 87004 .......... .......... .......... .......... .......... .......... 136 ACTTGAATGA CCTAACTAAG AATATCTGTC AAACATATCA GAGGATTGTG AACAATTTTT 87064 .......... .......... .......... .......... .......... .......... 136 CAAAAGAATT GATTGGATAC ATGATATTCC TGACAAGTAA GAAGACTTTA AGCTGACTCA 87124 .......... .......... .......... .......... .......... .......... 136 AACAGATGAT GACATCATTA CAAAAAGGAA AGTTTAACAG AGGTGCATAA ATACGCTATT 87184 .......... .......... .......... .......... .......... .......... 136 GAATCTTTTG TCAAAACCAA ATAATGAAAT GGCCTTCAAG AAGATCAGTA AATGTTCAGA 87244 .......... .......... .......... .......... .......... .......... 136 ATATCGTGGT CACTGGTGAT GACGTTGATG AGGTTGCAAG ATTGAAGGTT TACCTGAGCC 87304 .......... .......... .......... .......... .......... .......... 136 GCACCTTCGA CATAAATTAG GCATACTAAG GTACTTCTTG GAAACAGTAT ACCAAAACAA 87364 .......... .......... .......... .......... .......... .......... 136 TTCAGATTCT ATATTTTCTA AGGGCTGCTA AATATTAAAC TGACGAACAT GACAAGAGTT 87424 .......... .......... .......... .......... .......... .......... 136 CTCTACAAAA ACTCAAGGTG AACGTGAATT TTTCAGAAGA TATCACACCT AAAAAGAATC 87484 .......... .......... .......... .......... .......... .......... 136 TATTATTTGA AAGAAGACAC TACCTAGAAT ATACACTTTT TCTATACTTG CTGGCAACAG 87544 .......... .......... .......... .......... .......... .......... 136 TCAAGAACTG AAATTGCAAG CAACTCTATG TATTCCTTAA TCTGTATAGT ACATATGACG 87604 .......... .......... .......... .......... .......... .......... 136 TACACAAATG GCTATAACAG AGTTTCTCTT ATTAATAATA CTAACAGCTA CTCTGGGAGT 87664 .......... .......... .......... .......... .......... .......... 136 CTCAGTGTGA CTTCTTGCCT TTAGAAGATT ACAGAACTTA TGAGACATCC TTCTTAGAAG 87724 .......... .......... .......... .......... .......... .......... 136 AAGGTAGCAA GAGGCAAAGG AAGTTCTCAA TTGTCCCGTA TGTAACTTCA GTTTAATTCA 87784 .......... .......... .......... .......... .......... .......... 136 CAGTACCATT TTGAATAGGA AAAAGATATC ATTGGAACAC TACACCAGGA AGGGAAGTGT 87844 ||||| .......... ........TC AAAAG..... .......... .......... .......... 143 TCTATGCAAG TGAAATAAAT ACTGCTTGAG AACACCAAAT TCAACTGCTG CTTTAACAAG 87904 .......... .......... .......... .......... .......... .......... 143 CACAATAACC ACAAGTAATA AGAAAGTTAG AAGAGGAACT TACTTTTAAT ATATTGAGGT 87964 .......... .......... .......... .......... .......... .......... 143 CATCTTCCAT CATGACAACA TCAAATTCAG AAAATGCACG TGATGGACCT CCATCTAGTA 88024 .......... .......... .......... .......... .......... .......... 143 ATACCCAAGC ATAACCTTCC TATCCAATGA AATCAGAGAG TCAGAACTGG ACAATGGGAA 88084 .......... .......... .......... .......... .......... .......... 143 TCATAATAGG AAAATTCACA AGAATGAGAC TGAGATTCTA CCAGTGATGC CTTAAAAATA 88144 .......... .......... .......... .......... .......... .......... 143 CTTTTCACTA CAATGTCTCT GAGGGCGTCA TCAATCAGAG CACAAACATT ATTGAGGACC 88204 | .......... .......... .......... .......... .......... .........C 144 TAGAAAACAA AAAAGGCTGT GAATACAGTA ATCTTGGAAC TGGTCCGACT TTTAGACCAT 88264 ||||| ||| ||| TAGAAGACAG AAATT..... .......... .......... .......... .......... 159 GCATTGAAAG AGAATATGCA ATCCCTTTAT CGTTTCTTTC CTTTATTTAG GGATATTAGA 88324 .......... .......... .......... .......... .......... .......... 159 CTGTAGAGTG AAATATTGAA TGTCTTACTC TATCAAATTG TGGAAGTATA GTTTCCAATC 88384 .......... .......... .......... .......... .......... .......... 159 GTGCCCCTTC AACATCACCG TGATATAAAT TAAATATGAA TGGTTCTCTC ATGTCCCAAA 88444 .......... .......... .......... .......... .......... .......... 159 ACACAACTCT AGCTCCTACA GGTCACATAA GAATAGCTTA GGATAAAACT TTGTAGAAGA 88504 .......... .......... .......... .......... .......... .......... 159 GACAAAAGAA GCAAATTTTT GCCTTCAAAA CTCAGAAAGC AAATTATATA CTACCATCAA 88564 .......... .......... .......... .......... .......... .......... 159 ATCCAAGAAT GAATAATTGC TCAAAAGTCG CACAGCATTT ATTAATATGA AAAAAGAAAG 88624 .......... .......... .......... .......... .......... .......... 159 TTGGGGAAGA CATTAAAGAG CTTTAAGAGG ATACCAAGAA CGTCTATCTG GCAAATTAAG 88684 .......... .......... .......... .......... .......... .......... 159 TAAACAATGA GAGAGGCCAG TTCTATTGAT TGTTCAAGTT GAACGCACAC ATGAAACTAT 88744 .......... .......... .......... .......... .......... .......... 159 CTCGTTTTAA AAACAAGCTT TCATGAAGTT AAAATAATGG ACCAAACATA GATTGAGTGA 88804 .......... .......... .......... .......... .......... .......... 159 TTCCACATGT TTGCAAGATG CCTATTTTAC CTTTTTGATA AACAAATGAC CATTTCCAAA 88864 .......... .......... .......... .......... .......... .......... 159 GTACTAATAG TGGCATGAAA GACTTACAGA CCACCAGTAC TCTTTTTTGT TAATTGTTAA 88924 .......... .......... .......... .......... .......... .......... 159 CAGAACAGCA GTACCATATA ATGAAAGAGA AGCAAAAAGA ACGATAAGCA AAAAACTAAA 88984 || | || ||| |||| .......... .......... .......... .......... ..GAAATACA AAATACTATT 177 GCAAAATCAA GAA 88997 |||||||| || CCAAAATCAT AAA 190 hqPGS_C08HBa0235H18.1+_SGN-E546063+ (81785 81873,86113 86131,87803 87809,88204 88219,88967 88997) ******************************************************************************** EST sequence 264 +strand 514 n (File: SGN-E256217+) 1 AAAAACCAGC TTTTAAGTCA GTTTGACCAG CTTTTAAGCT GAGCCAAACA GGCTCTTAAA 61 ATGTCTGCTT AGATGTGCTA TATATATTTG AGCTTTTTTT GAAGTAGTAT ATTATCCTTA 121 AGTTCAACAT AAAAATACAT GCTTTAACAT AGCACATATA GTTAATCAAA AGACGAAATG 181 ATGAATAATT TTGCGAATTT GATTATTCAC AAGAAAAGGG ATAGTTCAAA GTGTACATTT 241 CAAGTAATTG AAGATATCAT AAAGACTAAA ATTAGAAGAA CTAATAATTG AGGGATCAAA 301 AATGTTATTA CCTTATTAAA ATACTATTCC ATTTTCATAT TAAATTAACT AATTAAGAGT 361 GTTTTATAAT CTAATAAAAC ATGCAATAAT TATTGACGAA ATGTGGTTTT GGTACCTATA 421 ATCTTTCTGA ATATTTGCTC TTATTTTTTC TCTTTTTATT TTTCCATGGA TTAGTATTGG 481 AAGCTTAGGA TCTGGAAATT CAGAAGCTTA TGTG Predicted gene structure (within gDNA segment 81413 to 88512): Exon 1 82067 82126 ( 60 n); cDNA 1 60 ( 60 n); score: 0.950 Intron 1 82127 82166 ( 40 n); Pd: 0.896 (s: 0.96), Pa: 0.000 (s: 0) Exon 2 82167 82202 ( 36 n); cDNA 61 95 ( 35 n); score: 0.653 Intron 2 82203 83838 (1636 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.70) Exon 3 83839 83882 ( 44 n); cDNA 96 137 ( 42 n); score: 0.705 Intron 3 83883 84060 ( 178 n); Pd: 0.000 (s: 0.70), Pa: 0.000 (s: 0.64) Exon 4 84061 84126 ( 66 n); cDNA 138 200 ( 63 n); score: 0.621 Intron 4 84127 85265 (1139 n); Pd: 0.000 (s: 0.64), Pa: 0.000 (s: 0) Exon 5 85266 85279 ( 14 n); cDNA 201 213 ( 13 n); score: 0.786 Intron 5 85280 87145 (1866 n); Pd: 0.992 (s: 0), Pa: 0.000 (s: 0) Exon 6 87146 87161 ( 16 n); cDNA 214 229 ( 16 n); score: 0.812 MATCH C08HBa0235H18.1+ SGN-E256217+ 0.778 236 0.459 C PGS_C08HBa0235H18.1+_SGN-E256217+ (82067 82126,82167 82202,83839 83882,84061 84126,85266 85279,87146 87161) Alignment (genomic DNA sequence = upper lines): AAAAATCAGC TTTTAAGTCA GTTTGACCAG CTTTTAAGCT GAGCCAAACA GGCTCTAAGA 82126 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| | | AAAAACCAGC TTTTAAGTCA GTTTGACCAG CTTTTAAGCT GAGCCAAACA GGCTCTTAAA 60 GTAATTCTAA GATCCATCTT TATAGTAAAT ATAATAAAAG ATGTATATTT A-ATTTGCTA 82185 |||| | || | || ||||| .......... .......... .......... .......... ATGTCTGCTT AGATGTGCTA 80 TATCAAGTTG CATGCTAATA ATTTTTCATG TAACTAGTTT CACTTGTTAT TTTGGAAAAG 82245 ||| | ||| | ||| TATATATTTG -A-GCTT... .......... .......... .......... .......... 95 TCGAGTGTAA TTATTTTTTT CAAATTTAAT AATTAATATG ATGATAAATT TTAAAAAATT 82305 .......... .......... .......... .......... .......... .......... 95 ACTTTATCAA CTATAGAAAT CGAAATTCTC TTATGTTAAA TTTTCTCCAT TCAAATTTCT 82365 .......... .......... .......... .......... .......... .......... 95 TTTCAATTGT GTGATTTTTA AAGCCAAAGG AATACTTGAA TAAGTGTGCA AATTATAGTT 82425 .......... .......... .......... .......... .......... .......... 95 TTATCTTTCT TTTCACTTTA TTTTTATGAT AGTTTAATCA GGTTATCGAT TTACTCATTA 82485 .......... .......... .......... .......... .......... .......... 95 TTGTGTCATA AGGTTACTTT TATTTTAAAT TTGTATGGAA ATGAGATGTA TAATTCAAGT 82545 .......... .......... .......... .......... .......... .......... 95 TTTGTTAGTA AGATGGACGA AATTACATAA GAGTTAATTG TCCAACTGTC CTACCTATAC 82605 .......... .......... .......... .......... .......... .......... 95 ATGGAAAATT TTCCTTTTCT TATCCAACAA CTAAAGAAGG AAAATTTGGA AACAAATTTT 82665 .......... .......... .......... .......... .......... .......... 95 TCTGTTCTTT TAGTATTTAT CCAATAAGGT CATATCATGT TAGAGCCAAT TATTAAATAT 82725 .......... .......... .......... .......... .......... .......... 95 ATATACTAGA CATCGGTATC TATTCACTGA TTCAATATCT GTTATTTTTT TATTTCAGTT 82785 .......... .......... .......... .......... .......... .......... 95 TATGCGATAT AGATGGAATT AAATAGTAGA TTAAATTTTG ACATGAATTT TAAAAAAATT 82845 .......... .......... .......... .......... .......... .......... 95 TAAGTAGTTG TTGTAATTTA TAGTATTTTA CTGTAATTTT TAAATAATAT ATATTACTTC 82905 .......... .......... .......... .......... .......... .......... 95 TTTTGTCCCA ATGTAAGTGA TATCCCAATG TAAGTGATAC CGATAGAATT TCAAGAGTCA 82965 .......... .......... .......... .......... .......... .......... 95 ATCAAATGTT GTTAATTATT GAATTTACAA TATTTTCTAC GTAGTTTTCA AATTAAATAT 83025 .......... .......... .......... .......... .......... .......... 95 TTAATGTTAC TTCTTTTGAT TATTGTAATT TATAGTAATT TTTACGTATT TTTTAATAAT 83085 .......... .......... .......... .......... .......... .......... 95 ATATGTTACT TCTCTTATCC CAATGTATGT AGCACAAATA GAATTTCAAG AGTCAATCAA 83145 .......... .......... .......... .......... .......... .......... 95 ATGTTGTTAA TTATTGAGAT TTACAATATT TTCTATCGTA GTTTCCAAAT TAAATAATAC 83205 .......... .......... .......... .......... .......... .......... 95 ATGTTACTTC TTCTATCCTT TTTATGTGAC ATAGATAGAT TAATTTTATG AATCAATCGA 83265 .......... .......... .......... .......... .......... .......... 95 AATTTTTATT TATTTTTTAT AAATATTTTA AATTGTCAGT TAAAACATTT AAAATCAAGA 83325 .......... .......... .......... .......... .......... .......... 95 CAAACAAATT AAAACGGAAG AACCACCGAA AAAGAAAAAA TAATGCAGCT GTCAGGTAGG 83385 .......... .......... .......... .......... .......... .......... 95 GTCGACCATG ACCTCCCTGG TTACTATCAC TTATATATAT AAAAAAAAAT TAAAATCAAG 83445 .......... .......... .......... .......... .......... .......... 95 ACAAACAAAT TAAAACGGAA GAATCATAGA AAAAGGTAAA TAGTGTAGCT ATCGCGCAAG 83505 .......... .......... .......... .......... .......... .......... 95 CATGCATGTC GATCATGACC TGTCTGTTTG TTGTCACTTA AATATAATAA AATTTATAAA 83565 .......... .......... .......... .......... .......... .......... 95 TCAAAACAAA CAAATTAAAA CAAATAAAAA AATAAAAATA TAAATGCCCA CCAGACATAT 83625 .......... .......... .......... .......... .......... .......... 95 CAATCATGAC CTGCCTAGTT ATTGTCACTC GTATATGTGT AATTTCTTTC CTCTTTTTGC 83685 .......... .......... .......... .......... .......... .......... 95 TTTTTCCTTC TATTTCATCT AGAAGTTCCA TTCCTAATAT GTTACCAAAT TTTATTTTTA 83745 .......... .......... .......... .......... .......... .......... 95 AAAAATAATT ATCACTGAAA TGAGTTAATT TGTGCAAATT TCAATTATTT TGATTAAATA 83805 .......... .......... .......... .......... .......... .......... 95 ACTACTATCT GCTATCCAAA AATTGAATTA CACTTTTTGA AGGGATTTTA TTAAGAGTAA 83865 ||||||| | | | | || ||| ||| .......... .......... .......... ...TTTTTGA A-GTAGTATA TTATCCTTAA 121 ATTAACACAT GATAATAGTT ATGATAATTA AGATATATTG ATTAACCTAT GTGGGATTAT 83925 || | |||| | |||| GTTCA-ACAT AAAAATA... .......... .......... .......... .......... 137 ACCTCTCAAT TATAATGCTT TTTGACTAAC TTTTTTTTTT TGTTCTTTTA AATTCTTACG 83985 .......... .......... .......... .......... .......... .......... 137 TATTCCAAAC GGTTCTATCC TCTAACACAA AATCCCACTT AAAAATCAGG AAAACTCAGA 84045 .......... .......... .......... .......... .......... .......... 137 AAATAAAAAA ATGCACATTT TAATTATATT GATCAATTAT TTAATCAAAT GAAGATAATT 84105 ||| | | | || | || || ||||||||| || || ||| .......... .....CATGC T-TTAACATA GCACATATAG TTAATCAAAA GACGA-AATG 180 ATTTAGTAAC TATCTTCATT TATATTTTAA TTGTATTAGT GAGAAACAGA AAAAATAATA 84165 | | | ||| | | ||| | A-TGAATAAT TTTGCGAATT T......... .......... .......... .......... 200 TTACTAGTGT TTTTACACAG GAAAATTAGT AAGCTTTTTA ATATTTCGGT AAGAATACTT 84225 .......... .......... .......... .......... .......... .......... 200 TTCTAGTGAG CTAATTCGAC GAGAAAAACT TTTATCATCT ACATGTATTG TAGAAGAAAT 84285 .......... .......... .......... .......... .......... .......... 200 ATGGAAACTG CTAAGGAGGT TCTGTAGGGT TACGATAATT TGAAAAGTTT TAGGATTATT 84345 .......... .......... .......... .......... .......... .......... 200 ACCAAAAGCA ATCAATTAAT CAGTTAGCTG CATGTCTCAA TCATAAACTA GTTATAGTGA 84405 .......... .......... .......... .......... .......... .......... 200 TAAAATAATT AATAGTCAAC CATACTAATA ATTAATTAAT AAAATGAGAC CAAGAAATAA 84465 .......... .......... .......... .......... .......... .......... 200 ATTGAGCCTT TATATTAACG AACCTTCCTA GTGCTCACTT CTCAAATATT AGAAGTTGCT 84525 .......... .......... .......... .......... .......... .......... 200 AAGAAGAAAA ATTAAGGAAA AATTAATACA CGTCTGGTGT TTCCCTTATT TTTAATTTTT 84585 .......... .......... .......... .......... .......... .......... 200 TATTTTATTT TTAAAATCTC TAAAATTCCT TACGTCTTTA ATGTATCCGA ACTACATATC 84645 .......... .......... .......... .......... .......... .......... 200 AATGAATTTG AACCAACATT TAATGTATTC AAGCTACATA TATATATATT CATTTATTTT 84705 .......... .......... .......... .......... .......... .......... 200 ATAATGTATC CGAGCTACAT ATTATGTATC AGATCTAGTT TTAGTGTATC CAAACTGCAT 84765 .......... .......... .......... .......... .......... .......... 200 ATGTGTGTAT TCAGTTTATG TTATAATGTA TCCGAGATAC CCTTTAATGT ATCCAATTTG 84825 .......... .......... .......... .......... .......... .......... 200 TATTACTTTT TAAGGGATTA ATGTAGTTAC AAAACTAAAT AGGAATAAAT TATGATTTTC 84885 .......... .......... .......... .......... .......... .......... 200 ATATTAAAAC TATGTGATTC CTAAAACTTA TCCGAAAAAA GTCCACGAGA AGATCGCCAG 84945 .......... .......... .......... .......... .......... .......... 200 GTCTCTTTCT GAGACAGTGG CAAACTAGCT CAGACATCAT AATTATAAGA AAATAAGATC 85005 .......... .......... .......... .......... .......... .......... 200 GAGTTTATTT CAATATGATT AAAATATTCA TATTCTTACT TAATTTAAAG ACGTTATTTA 85065 .......... .......... .......... .......... .......... .......... 200 CATCTTGAAA AACCTGCAAA ATTCTTATAT ATTATCATAG CTTCCATAGT TAAGTGCTCT 85125 .......... .......... .......... .......... .......... .......... 200 TAGTAAGGAA TGTGTAGCAA TAGACTGTGA AAATGAAATG TGCTGCCTCA ATTACTATAA 85185 .......... .......... .......... .......... .......... .......... 200 TTATTTTTGC AAGCATAGGT TATGTTGTTA TTGCTAGTAT AAAGTTGCTC CATGTGTCTT 85245 .......... .......... .......... .......... .......... .......... 200 AAATCACATC TTTTATGGTG CATTAATTAA CAAGGTAGGT AAGTTGAGAC TTCTATTTGA 85305 ||| ||| | |||| .......... .......... GATT-ATTCA CAAG...... .......... .......... 213 ATTTTCTCAT ATATAATGAC ATAAAATTTC AATAATGTGG ATGCAAAGTA AGGACAGGCA 85365 .......... .......... .......... .......... .......... .......... 213 TACATGATAT GTCACAATGT TGATTTGCTA ACTAGGTATG AGATGTAGAT ATACTATAAT 85425 .......... .......... .......... .......... .......... .......... 213 CTGGGAATGT TACTTTTACT TTTATAGTTG AGACCCAGAG TTTACAACAT TGATCTACAT 85485 .......... .......... .......... .......... .......... .......... 213 CTTCAAAGTT AGAAGCAAAC ATGACAAAAT TTTCTGAGAA TAATACTCCC AGAATGGAGT 85545 .......... .......... .......... .......... .......... .......... 213 ACCCTCTCAT TCTTCATTTA AATGCAATTT GCATATATGC AACTTTTAAC GAGTACCTTT 85605 .......... .......... .......... .......... .......... .......... 213 AATGGGCGAT ATGCTGTTAG GAAGGCGTCC ATCATCACCA TCCCACTTGC CTAAAATCTG 85665 .......... .......... .......... .......... .......... .......... 213 ATGTTGCGTC TTGGATTTTC TTCTTTAAAG ATCTGAAACT GCTACTGCTT TTGTCAGACC 85725 .......... .......... .......... .......... .......... .......... 213 AACGAAACGA AGCACTCCTT TTAATGAGAT CTGCCATAAG TGGCGACTTC ATAGAGGAAT 85785 .......... .......... .......... .......... .......... .......... 213 CCTCCACTGC AGCCCCACTG TACACTGCGC TCCAAAAAAA AAAATTGGAT TTCAGGAGGT 85845 .......... .......... .......... .......... .......... .......... 213 GAAATATATA CTTTATCATA TCAGCCTTTT GGGAAACCAT AACAAACTAA AAGGATTCGA 85905 .......... .......... .......... .......... .......... .......... 213 AAGGGCACCT GACGATGGTG GGAGGTGGTA ATAGCGCTTC AAGAATTTTG AAGCTTCTCT 85965 .......... .......... .......... .......... .......... .......... 213 CTCCTTCTTG TGACATAAAA CGCGTATCAA GGTGTGTGCA TCTCCCAGAT GTCTGTGGCC 86025 .......... .......... .......... .......... .......... .......... 213 ATATTTATGT GCTTCAAGTC CTGAACTGTG TTCACTAGAA GTCATCAACA ATTGGATCAC 86085 .......... .......... .......... .......... .......... .......... 213 AGATTCAGCC TGCTACGAAA ACCAAAATAT TAAATAGGTC CCACAGCATG CATACAGAAA 86145 .......... .......... .......... .......... .......... .......... 213 CAGGCTAAAA GCTTTAATTA ATTCTTAACA AACCCGGAGG GAAAATAAAC TGAGGATTTG 86205 .......... .......... .......... .......... .......... .......... 213 ATGAGCGAAT CTCGCTTCTT CTTCAACTAG TGATCGGGGA AGCCCTTCTC CGTCAGCAAC 86265 .......... .......... .......... .......... .......... .......... 213 GAACAAGTCC TAGAAAGTGA AAGAAACATA ATTGTTGTTT CTCAAATAGT CGCTGAATAT 86325 .......... .......... .......... .......... .......... .......... 213 CTCTTGCAAA AGATATCTAA AATCCAAGCA TAATAGAAGC AAAAGATCCA TATAGGCAAA 86385 .......... .......... .......... .......... .......... .......... 213 TATCAACTAG CTGAGTTACA TCACCAATGG ATAAATTCAG TGTGGTCAGG ACTCTTTAAG 86445 .......... .......... .......... .......... .......... .......... 213 ATCTGGTTAA AAAAATTTAC CTTGGTTTCG GGGAAGTGTG AAATTCAGAA AACTTCTATT 86505 .......... .......... .......... .......... .......... .......... 213 ATGAAAATAC AAGAAAAATT ATTTAGTATT GGAAATCAAG GAATTAAAAT AATTAGGAAA 86565 .......... .......... .......... .......... .......... .......... 213 TGAAAGCAAA AGGTCAAACA CAATTAAACC AGCCTACAAG AAAAAAATTG TCTAGAATAT 86625 .......... .......... .......... .......... .......... .......... 213 TAAATTTCAA TGATCAGCCA TATATCTTTT ATAACTAAGA AATTCCCAAG GGACAATATA 86685 .......... .......... .......... .......... .......... .......... 213 GCGCATGGTT CAAAACTCTG GATAATGAAC GCGGCTTTGT CAGGGTCCAA GTTCGAAATA 86745 .......... .......... .......... .......... .......... .......... 213 TGAACTGTGA CTAACACGCA CATCATGCTT TACGCTCTTA CCACTAGATC AAAGGCCTAG 86805 .......... .......... .......... .......... .......... .......... 213 GGCCCAATGA CCAAAGCTAA TACACCACAT TGTGGGCCAA AATTAGAGAT GAGGTTCGTC 86865 .......... .......... .......... .......... .......... .......... 213 AATGCAGGCT TTTGGTTACT AAAAATAACA ATTATGGAAC TATAATAAAT AAGAGAACGA 86925 .......... .......... .......... .......... .......... .......... 213 GAGACAAGGA TCATTAGCTC AGAGAAAAGA TAACTTATTA CGAATCTACA TAGTTACAGA 86985 .......... .......... .......... .......... .......... .......... 213 AATCCTTGTC CTAGTTGAAA CTTGAATGAC CTAACTAAGA ATATCTGTCA AACATATCAG 87045 .......... .......... .......... .......... .......... .......... 213 AGGATTGTGA ACAATTTTTC AAAAGAATTG ATTGGATACA TGATATTCCT GACAAGTAAG 87105 .......... .......... .......... .......... .......... .......... 213 AAGACTTTAA GCTGACTCAA ACAGATGATG ACATCATTAC AAAAAGGAAA GTTTAA 87161 |||| ||| | ||| || .......... .......... .......... .......... AAAAGGGATA GTTCAA 229 hqPGS_C08HBa0235H18.1+_SGN-E256217+ (82067 82126,82167 82202,83839 83882) ******************************************************************************** EST sequence 13 +strand 506 n (File: SGN-E578392+) 1 CTCAGCTTAA ACCAGTTTTT TTCGATTCGA TGTTCGATAT ATATAACGAA GTCAAATCTC 61 ATATATTATT AAAGACATAA ATATAGATAA AGGTGACAGA GTTAGTTTAT CAACCTAACA 121 TGTCTAATCC ACCTAAGTTT GGGAAATTAA AGTTATTGAC CTACTCATTT ATTAGTTTAC 181 TGGGTAAGAA ATTAAAAATA ATATATAGTC TAAATTAATT TATGAGAATT TTTGTCAGAA 241 TATTTTCTTA TTTAGGGCCC GTTTGGATGG GCTTAATAAA AACAGCTTTA AAAAAGTACT 301 TTTGAAAGTG CTGAAACTTA TTTCTAAAAT AAACAGTTAT GCATTTGGAT AAAAGTGCTG 361 AAGTTGTTAT GCCAAACGTG AAAAGCGAAA AATGGAAGAA AGAGATGTTA GGGTTATATG 421 TGTAACTTGG AAATTGTATA AAAATATTAA GGGCAAAAAG ATAAAGATGT GATCAACTTA 481 AAACAGCTTA TAAGCTAAAA AAAAAA Predicted gene structure (within gDNA segment 78546 to 82592): Exon 1 81397 81453 ( 57 n); cDNA 197 249 ( 53 n); score: 0.684 Intron 1 81454 81717 ( 264 n); Pd: 0.000 (s: 0.68), Pa: 0.663 (s: 0.87) Exon 2 81718 81972 ( 255 n); cDNA 250 505 ( 256 n); score: 0.920 MATCH C08HBa0235H18.1+ SGN-E578392+ 0.877 312 0.617 C PGS_C08HBa0235H18.1+_SGN-E578392+ (81397 81453,81718 81972) Alignment (genomic DNA sequence = upper lines): AATATTCTCA CTATATATAA ATTATCTAAA AAGAATTTGT GGAATGATAT GTTTCTTGAC 81456 |||| | | | || | ||| |||| | | ||||||| | | | |||| |||||| AATAATAT-A -TA-GTCTAA ATTAATTTAT GAGAATTTTT GTCAGAATAT -TTTCTT... 249 TTTAAAAGTT TATTTCTTTG GAGAAAATGG TGAATTTTAA TTTGTCGATG ATTAGTTTGT 81516 .......... .......... .......... .......... .......... .......... 249 GATAATTAAT GTTGTTGTTC TCATTTGATC ATTAAATAGT TCCTTTTTTA GGGGGTTTTA 81576 .......... .......... .......... .......... .......... .......... 249 GTTACACTTT AATTTGTTTA TAATTAATTC TCTTAATTAT GCCTTTTAAA ACATTAATTG 81636 .......... .......... .......... .......... .......... .......... 249 AAACTAAAAA AAAATCAACT TTTTAGTTTC ATTTCTTTTA AGGATACATC TTATATTAAA 81696 .......... .......... .......... .......... .......... .......... 249 TTCATTTTCT ATAATAATTA GAGTAAGGG- CCGTTTGGAT GGGCTTAATA AAAGTAGCTT 81755 | | |||| |||||||||| |||||||||| ||| ||||| .......... .......... .ATTTAGGGC CCGTTTGGAT GGGCTTAATA AAAACAGCTT 288 TAAAAAAGTA CTTTTAAAAG TGCTGAAACT TATTTTTAAA ATAAGCAGTT ATGCGTTTGG 81815 |||||||||| ||||| |||| |||||||||| ||||| |||| |||| ||||| |||| ||||| TAAAAAAGTA CTTTTGAAAG TGCTGAAACT TATTTCTAAA ATAAACAGTT ATGCATTTGG 348 ATAAAAGTGC TGAAGTTGTT ATGTCAAACG TGAAAAGAGA AAAATGGAAG AAAGAAATGT 81875 |||||||||| |||||||||| ||| |||||| ||||||| || |||||||||| ||||| |||| ATAAAAGTGC TGAAGTTGTT ATGCCAAACG TGAAAAGCGA AAAATGGAAG AAAGAGATGT 408 TAGGGTTATA TGGATAATTT GGAGATTGTA TAAAAATATT AAGAGCAAAA AGATAAAAAT 81935 |||||||||| || ||| || ||| |||||| |||||||||| ||| |||||| ||||||| || TAGGGTTATA TGTGTAACTT GGAAATTGTA TAAAAATATT AAGGGCAAAA AGATAAAGAT 468 GTGGTCAACT TAAAACAGCT TATAAGCTAA AAAAAAA 81972 ||| |||||| |||||||||| |||||||||| ||||||| GTGATCAACT TAAAACAGCT TATAAGCTAA AAAAAAA 505 hqPGS_C08HBa0235H18.1+_SGN-E578392+ (81718 81972) ******************************************************************************** EST sequence 1154 -strand 346 n (File: SGN-E391901-) 1 ATACTCTTCA CCCATGAGTT TGGACTGATT GACAAGAAGG AACTGGCTCC ACTTCAAGAG 61 ATTATAGAAT CCATCATCGT CCCATACTGA ACAATCGTGA TATTTCACTG TGCTGCTAAA 121 GCTGGAACTA AATAGTGTAA TGTAATGCAA TAAAGTTTCT CGTGGTCATC CAAAGTGTAT 181 AGCCTCAGCT GACAATTTGA AGTGTCTATG AATGTATAAT GGTTGTAGCT TTTTCTATAT 241 TGCTTTTAAG TAAAGTGCTT TTGTGACCCG TTTGGATGGG CTTAGTAAAA GCAGCTTTAA 301 AAAAGTACTT TTGAAAGGAC TGAAACTTAT TTTTAAAAAA AAAAAA Predicted gene structure (within gDNA segment 78446 to 82476): Exon 1 81726 81799 ( 74 n); cDNA 268 341 ( 74 n); score: 0.919 MATCH C08HBa0235H18.1+ SGN-E391901- 0.919 74 0.214 C PGS_C08HBa0235H18.1+_SGN-E391901- (81726 81799) Alignment (genomic DNA sequence = upper lines): CCGTTTGGAT GGGCTTAATA AAAGTAGCTT TAAAAAAGTA CTTTTAAAAG TGCTGAAACT 81785 |||||||||| ||||||| || |||| ||||| |||||||||| ||||| |||| |||||||| CCGTTTGGAT GGGCTTAGTA AAAGCAGCTT TAAAAAAGTA CTTTTGAAAG GACTGAAACT 327 TATTTTTAAA ATAA 81799 |||||||||| | || TATTTTTAAA AAAA 341 hqPGS_C08HBa0235H18.1+_SGN-E391901- (81726 81799) ******************************************************************************** EST sequence 782 -strand 540 n (File: SGN-E253695-) 1 TTTTAAAATA AGCAATTATG CGTTTGGATA AAAGTGTTGA AGTTGTTATG CCAAACGTGA 61 AAAGGGAAAA ATAGAAGAAA GAGAAGTTAG TGTTATATGG GTAATTTGGA GATTGTATAA 121 AAATATTAAG GGAAAAAACA TAAAAATATG GTCAACTTAA AACAGCTTAT AAGCTAAAAA 181 AAAAAAGCAC ACTTTTGGCT TAAAATAAGT TTTTTTAACT TAAAATAAGC TATTTTGAGT 241 ATTGCCAAAC ATTTAAATAA GTCAAAAACC AGCTTTTAAG TCAGTTTGAC CAGCTTTTAA 301 GCTGAGCCAA ACAGGCTCTA AAGCTCGAGA TAGTGAAACT CTAAGATGAT CAATTAAGGA 361 ACTGGTGTTG GTTGTTTTTA GTAGATCTCT TACTTGTTCA AATGCAGGCA TGAGGAAGAG 421 GAGTCCAGTT TGAAAGTAGT CAATTTGAAG CTCAAGAATG TCCCATGGTG TCAACTCAAT 481 AATCTTACAA TTATCTGTAT GGTGCTGACT TTTTCCCTCA GCTTTAACCG TCCATTTTGA Predicted gene structure (within gDNA segment 80270 to 84914): Exon 1 81789 82124 ( 336 n); cDNA 1 321 ( 321 n); score: 0.899 MATCH C08HBa0235H18.1+ SGN-E253695- 0.899 336 0.622 C PGS_C08HBa0235H18.1+_SGN-E253695- (81789 82124) Alignment (genomic DNA sequence = upper lines): TTTTAAAATA AGCAGTTATG CGTTTGGATA AAAGTGCTGA AGTTGTTATG TCAAACGTGA 81848 |||||||||| |||| ||||| |||||||||| |||||| ||| |||||||||| ||||||||| TTTTAAAATA AGCAATTATG CGTTTGGATA AAAGTGTTGA AGTTGTTATG CCAAACGTGA 60 AAAGAGAAAA ATGGAAGAAA GAAATGTTAG GGTTATATGG ATAATTTGGA GATTGTATAA 81908 |||| ||||| || ||||||| || | ||||| ||||||||| ||||||||| |||||||||| AAAGGGAAAA ATAGAAGAAA GAGAAGTTAG TGTTATATGG GTAATTTGGA GATTGTATAA 120 AAATATTAAG AGCAAAAAGA TAAAAATGTG GTCAACTTAA AACAGCTTAT AAGCTAAAAA 81968 |||||||||| | ||||| | ||||||| || |||||||||| |||||||||| |||||||||| AAATATTAAG GGAAAAAACA TAAAAATATG GTCAACTTAA AACAGCTTAT AAGCTAAAAA 180 AAAAGCACCC CTACCCAGCT TTTAACTTTT GGCTTAAAAT AAGTTTTTTT TAACTTAAAA 82028 |||| | | || | |||||| |||||||||| ||| |||||| |||||||||| AAAA--A--- --A-GCA-C- ----ACTTTT GGCTTAAAAT AAG-TTTTTT TAACTTAAAA 225 TAAGTTATTT TGAGTATTGC CAAACAGCTA AACAAGTCAA AAATCAGCTT TTAAGTCAGT 82088 |||| ||||| |||||||||| |||||| || || ||||||| ||| |||||| |||||||||| TAAGCTATTT TGAGTATTGC CAAACATTTA AATAAGTCAA AAACCAGCTT TTAAGTCAGT 285 TTGACCAGCT TTTAAGCTGA GCCAAACAGG CTCTAA 82124 |||||||||| |||||||||| |||||||||| |||||| TTGACCAGCT TTTAAGCTGA GCCAAACAGG CTCTAA 321 hqPGS_C08HBa0235H18.1+_SGN-E253695- (81789 82124) ******************************************************************************** EST sequence 1155 -strand 618 n (File: SGN-E249253-) 1 GAAAAGGGAA AAATAGAAGA AAGAGAAGTT AGTGTTATAT GGGTAATTTG GAGATTGTAT 61 AAAAATATTA AGGGAAAAAA CATAAAAATA TGGTCAACTT AAAACAGCTT ATAAGCTAAA 121 AAAAAAAGGC ACACTTTTGG CTTAAAATAA GTTTTTTTAA CTTAAAATAA GCTATTTTGA 181 GTATTGCCAA ACATTTAAAT AAGTCAAAAA CCAGCTTTTA AGTCAGTTTG ACCAGCTTTT 241 AAGCTGAGCC AAACAGGCTC TAAAGCTCGA GATAGTGAAA CTCTAAGATG ATCAATTAAG 301 GAACTGGTGT TGGTTGTTTT TAGTAGATCT CTTACTTGTT CAAATGCAGG CATGAGGAAG 361 AGGAGTCCAG TTTGAAAGTA GTCAATTTGA AGCTCAAGAA TGTCCCATGG TGTCAACTCA 421 ATAATCTTAC AATTATCTGT ATGGTGCTGA CTTTTTCCCT CAGCTTTAAC CGTCCATTTT 481 GAAATGATGG ATACCTTGGA AGCCATAGCT TTCAATCACC TCTGTATTGG GTAAATCTGA 541 AGTTAAATCA GTGTGCTCAG CGGCGGAACA GCTTAATAAC CGGAAAAGTT GCCGGAAACG 601 GGACTTGAAC TGGTAACC Predicted gene structure (within gDNA segment 80850 to 87474): Exon 1 81847 82124 ( 278 n); cDNA 1 263 ( 263 n); score: 0.885 MATCH C08HBa0235H18.1+ SGN-E249253- 0.885 278 0.450 C PGS_C08HBa0235H18.1+_SGN-E249253- (81847 82124) Alignment (genomic DNA sequence = upper lines): GAAAAGAGAA AAATGGAAGA AAGAAATGTT AGGGTTATAT GGATAATTTG GAGATTGTAT 81906 |||||| ||| |||| ||||| |||| | ||| || ||||||| || ||||||| |||||||||| GAAAAGGGAA AAATAGAAGA AAGAGAAGTT AGTGTTATAT GGGTAATTTG GAGATTGTAT 60 AAAAATATTA AGAGCAAAAA GATAAAAATG TGGTCAACTT AAAACAGCTT ATAAGCTAAA 81966 |||||||||| || | ||||| |||||||| |||||||||| |||||||||| |||||||||| AAAAATATTA AGGGAAAAAA CATAAAAATA TGGTCAACTT AAAACAGCTT ATAAGCTAAA 120 AAAAAAGCAC CCCTACCCAG CTTTTAACTT TTGGCTTAAA ATAAGTTTTT TTTAACTTAA 82026 |||||| | || | |||| |||||||||| ||||| |||| |||||||||| AAAAAA---- ----AGGCA- C-----ACTT TTGGCTTAAA ATAAG-TTTT TTTAACTTAA 165 AATAAGTTAT TTTGAGTATT GCCAAACAGC TAAACAAGTC AAAAATCAGC TTTTAAGTCA 82086 |||||| ||| |||||||||| |||||||| |||| ||||| ||||| |||| |||||||||| AATAAGCTAT TTTGAGTATT GCCAAACATT TAAATAAGTC AAAAACCAGC TTTTAAGTCA 225 GTTTGACCAG CTTTTAAGCT GAGCCAAACA GGCTCTAA 82124 |||||||||| |||||||||| |||||||||| |||||||| GTTTGACCAG CTTTTAAGCT GAGCCAAACA GGCTCTAA 263 hqPGS_C08HBa0235H18.1+_SGN-E249253- (81847 82124) ******************************************************************************** EST sequence 27 +strand 528 n (File: SGN-E242674+) 1 GATGTTAGAG TTATGTGGAT AATTTGGAGA TTGTATAAAA ATATTAAGGG CAAAAAGATA 61 AAAATGTGGT CAACTTAAAA CAGCTTATAA GCTAAAAAAA AAGCACCCCT ACCCCAGCTT 121 TTAACTTTTG GCTTAAAATA AGTTTTTTTT TTTAACTTAA AATAAGTTAT TTTGAGTATT 181 GCCAAACAAC TAAATAAGTC AAAAATCAGT TTTTAAGTCA GTTTGATCAG CTTTTAAGCT 241 GAACTAAACA AGCTCTTAGA CAATAATTTT TTCTTTTACG TATCTCCACT TAAATAGTAG 301 ACATTATAAG TTTGAGGCAG TTCTCAACCA TGTAACCTAA GTCACAAATT TATGAGTTTC 361 CAATTTATGC ACTTTGGTTA AAAAAATAAC TATTCATATA AATTTCTTTT TTTATTATTT 421 TAATCGAAAA AAATCATCTA GAGTCGATTG TTAGAAATAG TTGCAACTTG CAACTATGTA 481 ACACAGAGAT AATAATTTTG TCTTTTTACG TATCTCCACT TAAATACC Predicted gene structure (within gDNA segment 81136 to 86064): Exon 1 81872 82126 ( 255 n); cDNA 2 260 ( 259 n); score: 0.918 MATCH C08HBa0235H18.1+ SGN-E242674+ 0.918 255 0.483 C PGS_C08HBa0235H18.1+_SGN-E242674+ (81872 82126) Alignment (genomic DNA sequence = upper lines): ATGTTAGGGT TATATGGATA ATTTGGAGAT TGTATAAAAA TATTAAGAGC AAAAAGATAA 81931 ||||||| || ||| |||||| |||||||||| |||||||||| ||||||| || |||||||||| ATGTTAGAGT TATGTGGATA ATTTGGAGAT TGTATAAAAA TATTAAGGGC AAAAAGATAA 61 AAATGTGGTC AACTTAAAAC AGCTTATAAG CTAAAAAAAA AGCACCCCTA -CCCAGCTTT 81990 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| AAATGTGGTC AACTTAAAAC AGCTTATAAG CTAAAAAAAA AGCACCCCTA CCCCAGCTTT 121 TAACTTTTGG CTTAAAATAA G---TTTTTT TTAACTTAAA ATAAGTTATT TTGAGTATTG 82047 |||||||||| |||||||||| | |||||| |||||||||| |||||||||| |||||||||| TAACTTTTGG CTTAAAATAA GTTTTTTTTT TTAACTTAAA ATAAGTTATT TTGAGTATTG 181 CCAAACAGCT AAACAAGTCA AAAATCAGCT TTTAAGTCAG TTTGACCAGC TTTTAAGCTG 82107 ||||||| || ||| |||||| |||||||| | |||||||||| ||||| |||| |||||||||| CCAAACAACT AAATAAGTCA AAAATCAGTT TTTAAGTCAG TTTGATCAGC TTTTAAGCTG 241 AGCCAAACAG GCTCTAAGA 82126 | | ||||| ||||| ||| AACTAAACAA GCTCTTAGA 260 hqPGS_C08HBa0235H18.1+_SGN-E242674+ (81872 82126) ******************************************************************************** EST sequence 188 +strand 643 n (File: SGN-E233074+) 1 GATGTTAGAG TTATGTGGAT AATTTGGAGA TTGTATAAAA ATATTAAGGG CAAAAAGATA 61 AAAATGTGGT CAACTTAAAA CAGCTTATAA GCTAAAAAAA AAGCACCCCT ACCCCAGCTT 121 TTAACTTTTG GCTTAAAATA AGTTTTTTTT TTTAACTTAA AATAAGTTAT TTTGAGTATT 181 GCCAAACAAC TAAATAAGTC AAAAATCAGT TTTTAAGTCA GTTTGATCAG CTTTTAAGCT 241 GAACTAAACA AGCTCTTAGA CAATAATTTT TTCTTTTACG TATCTCCACT TAAATAGTAG 301 ACATTATAAG TTTGAGGCAG TTCTCAACCA TGTAACCTAA GTCACAAATT TATGAGTTTC 361 CAATTTATGC ACTTTGGTTA AAAAAATAAC TATTCATATA AATTTCTTTT TTTATTATTT 421 TAATCGAAAA AAATCATCTA GAGTCGATTG TTAGAAATAG TTGCAACTTG CAACTATGTA 481 ACACAGAGAT AATAATTTTG TCTTTTTACG TATCTCCACT TAAATACCAG ACATCACTAA 541 CTTAAGTCAC AAACCCCTTG ACCTTCCCAA TTATATTTAA GCACTAGAAA ACTTATATAT 601 AAAAAATCGA ATTTAACGCT TAATATTTAT CAACTAACAC CTA Predicted gene structure (within gDNA segment 81136 to 87214): Exon 1 81872 82126 ( 255 n); cDNA 2 260 ( 259 n); score: 0.918 MATCH C08HBa0235H18.1+ SGN-E233074+ 0.918 255 0.397 C PGS_C08HBa0235H18.1+_SGN-E233074+ (81872 82126) Alignment (genomic DNA sequence = upper lines): ATGTTAGGGT TATATGGATA ATTTGGAGAT TGTATAAAAA TATTAAGAGC AAAAAGATAA 81931 ||||||| || ||| |||||| |||||||||| |||||||||| ||||||| || |||||||||| ATGTTAGAGT TATGTGGATA ATTTGGAGAT TGTATAAAAA TATTAAGGGC AAAAAGATAA 61 AAATGTGGTC AACTTAAAAC AGCTTATAAG CTAAAAAAAA AGCACCCCTA -CCCAGCTTT 81990 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| AAATGTGGTC AACTTAAAAC AGCTTATAAG CTAAAAAAAA AGCACCCCTA CCCCAGCTTT 121 TAACTTTTGG CTTAAAATAA G---TTTTTT TTAACTTAAA ATAAGTTATT TTGAGTATTG 82047 |||||||||| |||||||||| | |||||| |||||||||| |||||||||| |||||||||| TAACTTTTGG CTTAAAATAA GTTTTTTTTT TTAACTTAAA ATAAGTTATT TTGAGTATTG 181 CCAAACAGCT AAACAAGTCA AAAATCAGCT TTTAAGTCAG TTTGACCAGC TTTTAAGCTG 82107 ||||||| || ||| |||||| |||||||| | |||||||||| ||||| |||| |||||||||| CCAAACAACT AAATAAGTCA AAAATCAGTT TTTAAGTCAG TTTGATCAGC TTTTAAGCTG 241 AGCCAAACAG GCTCTAAGA 82126 | | ||||| ||||| ||| AACTAAACAA GCTCTTAGA 260 hqPGS_C08HBa0235H18.1+_SGN-E233074+ (81872 82126) ******************************************************************************** EST sequence 304 +strand 310 n (File: SGN-E233594+) 1 GATGTTAGAG TTATGTGGAT AATTTGGAGA TTGTATAAAA ATATTAAGGG CAAAAAGATA 61 AAAATGTGGT CAACTTAAAA CAGCTTATAA GCTAAAAAAA AAGCACCCCT ACCCCAGCTT 121 TTAACTTTTG GCTTAAAATA AGTTTTTTTT TTTAACTTAA AATAAGTTAT TTTGAGTATT 181 GCCAAACAAC TAAATAAGTC AAAAATCAGT TTTTAAGTCA GTTTGATCAG CTTTTAAGCT 241 GAACTAAACA AGCTCTTAGA CAATAATTTT TTCTTTTACG TATCTCCACT TAAATAGTAG 301 ACATTATAAG Predicted gene structure (within gDNA segment 81136 to 83884): Exon 1 81872 82126 ( 255 n); cDNA 2 260 ( 259 n); score: 0.918 MATCH C08HBa0235H18.1+ SGN-E233594+ 0.918 255 0.823 C PGS_C08HBa0235H18.1+_SGN-E233594+ (81872 82126) Alignment (genomic DNA sequence = upper lines): ATGTTAGGGT TATATGGATA ATTTGGAGAT TGTATAAAAA TATTAAGAGC AAAAAGATAA 81931 ||||||| || ||| |||||| |||||||||| |||||||||| ||||||| || |||||||||| ATGTTAGAGT TATGTGGATA ATTTGGAGAT TGTATAAAAA TATTAAGGGC AAAAAGATAA 61 AAATGTGGTC AACTTAAAAC AGCTTATAAG CTAAAAAAAA AGCACCCCTA -CCCAGCTTT 81990 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| AAATGTGGTC AACTTAAAAC AGCTTATAAG CTAAAAAAAA AGCACCCCTA CCCCAGCTTT 121 TAACTTTTGG CTTAAAATAA G---TTTTTT TTAACTTAAA ATAAGTTATT TTGAGTATTG 82047 |||||||||| |||||||||| | |||||| |||||||||| |||||||||| |||||||||| TAACTTTTGG CTTAAAATAA GTTTTTTTTT TTAACTTAAA ATAAGTTATT TTGAGTATTG 181 CCAAACAGCT AAACAAGTCA AAAATCAGCT TTTAAGTCAG TTTGACCAGC TTTTAAGCTG 82107 ||||||| || ||| |||||| |||||||| | |||||||||| ||||| |||| |||||||||| CCAAACAACT AAATAAGTCA AAAATCAGTT TTTAAGTCAG TTTGATCAGC TTTTAAGCTG 241 AGCCAAACAG GCTCTAAGA 82126 | | ||||| ||||| ||| AACTAAACAA GCTCTTAGA 260 hqPGS_C08HBa0235H18.1+_SGN-E233594+ (81872 82126) ******************************************************************************** EST sequence 307 +strand 514 n (File: SGN-E233735+) 1 GATGTTAGAG TTATGTGGAT AATTTGGAGA TTGTATAAAA ATATTAAGGG CAAAAAGATA 61 AAAATGTGGT CAACTTAAAA CAGCTTATAA GCTAAAAAAA AAGCACCCCT ACCCCAGCTT 121 TTAACTTTTG GCTTAAAATA AGTTTTTTTT TTTAACTTAA AATAAGTTAT TTTGAGTATT 181 GCCAAACAAC TAAATAAGTC AAAAATCAGT TTTTAAGTCA GTTTGATCAG CTTTTAAGCT 241 GAACTAAACA AGCTCTTAGA CAATAATTTT TTCTTTTACG TATCTCCACT TAAATAGTAG 301 ACATTATAAG TTTGAGGCAG TTCTCAACCA TGTAACCTAA GTCACAAATT TATGAGTTTC 361 CAATTTATGC ACTTTGGTTA AAAAAATAAC TATTCATATA AATTTCTTTT TTTATTATTT 421 TAATCGAAAA AAATCATCTA GAGTCGATTG TTAGAAATAG TTGCAACTTG CAACTATGTA 481 ACACAGAGAT AATAATTTTG TCTTTTTACG TATC Predicted gene structure (within gDNA segment 81136 to 85924): Exon 1 81872 82126 ( 255 n); cDNA 2 260 ( 259 n); score: 0.918 MATCH C08HBa0235H18.1+ SGN-E233735+ 0.918 255 0.496 C PGS_C08HBa0235H18.1+_SGN-E233735+ (81872 82126) Alignment (genomic DNA sequence = upper lines): ATGTTAGGGT TATATGGATA ATTTGGAGAT TGTATAAAAA TATTAAGAGC AAAAAGATAA 81931 ||||||| || ||| |||||| |||||||||| |||||||||| ||||||| || |||||||||| ATGTTAGAGT TATGTGGATA ATTTGGAGAT TGTATAAAAA TATTAAGGGC AAAAAGATAA 61 AAATGTGGTC AACTTAAAAC AGCTTATAAG CTAAAAAAAA AGCACCCCTA -CCCAGCTTT 81990 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| AAATGTGGTC AACTTAAAAC AGCTTATAAG CTAAAAAAAA AGCACCCCTA CCCCAGCTTT 121 TAACTTTTGG CTTAAAATAA G---TTTTTT TTAACTTAAA ATAAGTTATT TTGAGTATTG 82047 |||||||||| |||||||||| | |||||| |||||||||| |||||||||| |||||||||| TAACTTTTGG CTTAAAATAA GTTTTTTTTT TTAACTTAAA ATAAGTTATT TTGAGTATTG 181 CCAAACAGCT AAACAAGTCA AAAATCAGCT TTTAAGTCAG TTTGACCAGC TTTTAAGCTG 82107 ||||||| || ||| |||||| |||||||| | |||||||||| ||||| |||| |||||||||| CCAAACAACT AAATAAGTCA AAAATCAGTT TTTAAGTCAG TTTGATCAGC TTTTAAGCTG 241 AGCCAAACAG GCTCTAAGA 82126 | | ||||| ||||| ||| AACTAAACAA GCTCTTAGA 260 hqPGS_C08HBa0235H18.1+_SGN-E233735+ (81872 82126) ******************************************************************************** EST sequence 308 +strand 484 n (File: SGN-E377238+) 1 GATGTTAGAG TTATGTGGAT AATTTGGAGA TTGTATAAAA ATATTAAGGG CAAAAAGATA 61 AAAATGTGGT CAACTTAAAA CAGCTTATAA GCTAAAAAAA AAGCACCCCT ACCCCAGCTT 121 TTAACTTTTG GCTTAAAATA AGTTTTTTTT TTTAACTTAA AATAAGTTAT TTTGAGTATT 181 GCCAAACAAC TAAATAAGTC AAAAATCAGT TTTTAAGTCA GTTTGATCAG CTTTTAAGCT 241 GAACTAAACA AGCTCTTAGA CAATAATTTT TTCTTTTACG TATCTCCACT TAAATAGTAG 301 ACATTATAAG TTTGAGGCAG TTCTCAACCA TGTAACCTAA GTCACAAATT TATGAGTTTC 361 CAATTTATGC ACTTTGGTTA AAAAAATAAC TATTCATATA AATTTCTTTT TTTATTATTT 421 TAATCGAAAA AAATCATCTA GAGTCGATTG TTAGAAATAG TTGCAACTTG CAACTATGTA 481 ACAC Predicted gene structure (within gDNA segment 81136 to 85624): Exon 1 81872 82126 ( 255 n); cDNA 2 260 ( 259 n); score: 0.918 MATCH C08HBa0235H18.1+ SGN-E377238+ 0.918 255 0.527 C PGS_C08HBa0235H18.1+_SGN-E377238+ (81872 82126) Alignment (genomic DNA sequence = upper lines): ATGTTAGGGT TATATGGATA ATTTGGAGAT TGTATAAAAA TATTAAGAGC AAAAAGATAA 81931 ||||||| || ||| |||||| |||||||||| |||||||||| ||||||| || |||||||||| ATGTTAGAGT TATGTGGATA ATTTGGAGAT TGTATAAAAA TATTAAGGGC AAAAAGATAA 61 AAATGTGGTC AACTTAAAAC AGCTTATAAG CTAAAAAAAA AGCACCCCTA -CCCAGCTTT 81990 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| AAATGTGGTC AACTTAAAAC AGCTTATAAG CTAAAAAAAA AGCACCCCTA CCCCAGCTTT 121 TAACTTTTGG CTTAAAATAA G---TTTTTT TTAACTTAAA ATAAGTTATT TTGAGTATTG 82047 |||||||||| |||||||||| | |||||| |||||||||| |||||||||| |||||||||| TAACTTTTGG CTTAAAATAA GTTTTTTTTT TTAACTTAAA ATAAGTTATT TTGAGTATTG 181 CCAAACAGCT AAACAAGTCA AAAATCAGCT TTTAAGTCAG TTTGACCAGC TTTTAAGCTG 82107 ||||||| || ||| |||||| |||||||| | |||||||||| ||||| |||| |||||||||| CCAAACAACT AAATAAGTCA AAAATCAGTT TTTAAGTCAG TTTGATCAGC TTTTAAGCTG 241 AGCCAAACAG GCTCTAAGA 82126 | | ||||| ||||| ||| AACTAAACAA GCTCTTAGA 260 hqPGS_C08HBa0235H18.1+_SGN-E377238+ (81872 82126) ******************************************************************************** EST sequence 352 +strand 666 n (File: SGN-E237992+) 1 ATGTTAGAGT TATGTGGATA ATTTGGAGAT TGTATAAAAA TATTAAGGGC AAAAAGATAA 61 AAATGTGGTC AACTTAAAAC AGCTTATAAG CTAAAAAAAA AGCACCCCTA CCCCAGCTTT 121 TAACTTTTGG CTTAAAATAA GTTTTTTTTT TTAACTTAAA ATAAGTTATT TTGAGTATTG 181 CCAAACAACT AAATAAGTCA AAAATCAGTT TTTAAGTCAG TTTGATCAGC TTTTAAGCTG 241 AACTAAACAA GCTCTTAGAC AATAATTTTT TCTTTTACGT ATCTCCACTT AAATAGTAGA 301 CATTATAAGT TTGAGGCAGT TCTCAACCAT GTAACCTAAG TCACAAATTT ATGAGTTTCC 361 AATTTATGCA CTTTGGTTAA AAAAATAACT ATTCATATAA ATTTCTTTTT TTATTATTTT 421 AATCGAAAAA AATCATCTAG AGTCGATTGT TAGAAATAGT TGCAACTTGC AACTATGTAA 481 CACAGAGATA ATAATTTTGT CTTTTTACGT ATCTCCACTT AAATACCAGA CATCACTAAC 541 TTAAGTCACA AACCCCTTGA CCTTCCCAAT TATATTTAAG CACTAGAAAA CTTATATATA 601 AAAAATCGAA TTTAACGCTT AATATTTATC AACTAACACC TAATTGTCTT TTGTTTCATT 661 TGGAAA Predicted gene structure (within gDNA segment 81146 to 87454): Exon 1 81872 82126 ( 255 n); cDNA 1 259 ( 259 n); score: 0.918 MATCH C08HBa0235H18.1+ SGN-E237992+ 0.918 255 0.383 C PGS_C08HBa0235H18.1+_SGN-E237992+ (81872 82126) Alignment (genomic DNA sequence = upper lines): ATGTTAGGGT TATATGGATA ATTTGGAGAT TGTATAAAAA TATTAAGAGC AAAAAGATAA 81931 ||||||| || ||| |||||| |||||||||| |||||||||| ||||||| || |||||||||| ATGTTAGAGT TATGTGGATA ATTTGGAGAT TGTATAAAAA TATTAAGGGC AAAAAGATAA 60 AAATGTGGTC AACTTAAAAC AGCTTATAAG CTAAAAAAAA AGCACCCCTA -CCCAGCTTT 81990 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| AAATGTGGTC AACTTAAAAC AGCTTATAAG CTAAAAAAAA AGCACCCCTA CCCCAGCTTT 120 TAACTTTTGG CTTAAAATAA G---TTTTTT TTAACTTAAA ATAAGTTATT TTGAGTATTG 82047 |||||||||| |||||||||| | |||||| |||||||||| |||||||||| |||||||||| TAACTTTTGG CTTAAAATAA GTTTTTTTTT TTAACTTAAA ATAAGTTATT TTGAGTATTG 180 CCAAACAGCT AAACAAGTCA AAAATCAGCT TTTAAGTCAG TTTGACCAGC TTTTAAGCTG 82107 ||||||| || ||| |||||| |||||||| | |||||||||| ||||| |||| |||||||||| CCAAACAACT AAATAAGTCA AAAATCAGTT TTTAAGTCAG TTTGATCAGC TTTTAAGCTG 240 AGCCAAACAG GCTCTAAGA 82126 | | ||||| ||||| ||| AACTAAACAA GCTCTTAGA 259 hqPGS_C08HBa0235H18.1+_SGN-E237992+ (81872 82126) ******************************************************************************** EST sequence 404 +strand 434 n (File: SGN-E240879+) 1 GATGTTAGAG TTATGTGGAT AATTTGGAGA TTGTATAAAA ATATTAAGGG CAAAAAGATA 61 AAAATGTGGT CAACTTAAAA CAGCTTATAA GCTAAAAAAA AAGCACCCCT ACCCCAGCTT 121 TTAACTTTTG GCTTAAAATA AGTTTTTTTT TTTAACTTAA AATAAGTTAT TTTGAGTATT 181 GCCAAACAAC TAAATAAGTC AAAAATCAGT TTTTAAGTCA GTTTGATCAG CTTTTAAGCT 241 GAACTAAACA AGCTCTTAGA CAATAATTTT TTCTTTTACG TATCTCCACT TAAATAGTAG 301 ACATTATAAG TTTGAGGCAG TTCTCAACCA TGTAACCTAA GTCACAAATT TATGAGTTTC 361 CAATTTATGC ACTTTGGTTA AAAAAATAAC TATTCATATA AATTTCTTTT TTTATTATTT 421 TAATCGAAAA AAAT Predicted gene structure (within gDNA segment 81136 to 85124): Exon 1 81872 82126 ( 255 n); cDNA 2 260 ( 259 n); score: 0.918 MATCH C08HBa0235H18.1+ SGN-E240879+ 0.918 255 0.588 C PGS_C08HBa0235H18.1+_SGN-E240879+ (81872 82126) Alignment (genomic DNA sequence = upper lines): ATGTTAGGGT TATATGGATA ATTTGGAGAT TGTATAAAAA TATTAAGAGC AAAAAGATAA 81931 ||||||| || ||| |||||| |||||||||| |||||||||| ||||||| || |||||||||| ATGTTAGAGT TATGTGGATA ATTTGGAGAT TGTATAAAAA TATTAAGGGC AAAAAGATAA 61 AAATGTGGTC AACTTAAAAC AGCTTATAAG CTAAAAAAAA AGCACCCCTA -CCCAGCTTT 81990 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| AAATGTGGTC AACTTAAAAC AGCTTATAAG CTAAAAAAAA AGCACCCCTA CCCCAGCTTT 121 TAACTTTTGG CTTAAAATAA G---TTTTTT TTAACTTAAA ATAAGTTATT TTGAGTATTG 82047 |||||||||| |||||||||| | |||||| |||||||||| |||||||||| |||||||||| TAACTTTTGG CTTAAAATAA GTTTTTTTTT TTAACTTAAA ATAAGTTATT TTGAGTATTG 181 CCAAACAGCT AAACAAGTCA AAAATCAGCT TTTAAGTCAG TTTGACCAGC TTTTAAGCTG 82107 ||||||| || ||| |||||| |||||||| | |||||||||| ||||| |||| |||||||||| CCAAACAACT AAATAAGTCA AAAATCAGTT TTTAAGTCAG TTTGATCAGC TTTTAAGCTG 241 AGCCAAACAG GCTCTAAGA 82126 | | ||||| ||||| ||| AACTAAACAA GCTCTTAGA 260 hqPGS_C08HBa0235H18.1+_SGN-E240879+ (81872 82126) ******************************************************************************** EST sequence 300 +strand 662 n (File: SGN-E376754+) 1 TTTTTTTTTA AAATAAGTTT TTTTTAACTT AAAATAAGTT ATTTTGAGTA TTGTCAAACA 61 GCTAAATAAG TCAAAAACCA GCTTTTTAAG TCAGTTTGAC CAGTTTTTAA GCTGAGCCAA 121 ACAGGCTCTA AGAGGATCAA AGAAAGTACA CAAACTTAAA GAAAATAAGT AGAGATCACA 181 CCACTCATAC AATAAAACAT TACATTCAAT GAAGGTTCAA TACATCGAGA TGGTAAGACT 241 AACATTATAC TAGACAAGAG CCTACCCAAT GAATTATTTT TGGATTTTTT CACATTTTTG 301 ACAAGTCTAA ACTTCAAATG TAACAAGAGG ATAATGGAAT TACTTGGCCA TCATGACCTT 361 AACAAACTCC TCATAGTTGA TTTGTCCATC ACCATCAACA TCAGCTTCCC TAATCATCTC 421 ATCGACTTCT TCATCAGTAA GCTTCTCTCC AAGGTTAGTC ATCACATGAC GAAGCTCAGC 481 AGCGGAGATG AAGCCATTTT GATCCTTGTC GAAAACTCTG AATGCCTCTT TCAACTCCTC 541 CTCAGAGTCA GTATCCTTCA TCTTCCTGGC CATAAGGTTT AGAAACTCTG GGAAGTCGAT 601 GGTTCCATTA CCATCTGCAT CCACCTCGTT TATCATGTCC TGGAGCTCAG CTTTAGTAGG 661 GT Predicted gene structure (within gDNA segment 81332 to 88017): Exon 1 81995 82126 ( 132 n); cDNA 1 133 ( 133 n); score: 0.928 Intron 1 82127 85343 (3217 n); Pd: 0.896 (s: 0.93), Pa: 0.000 (s: 0) Exon 2 85344 85362 ( 19 n); cDNA 134 151 ( 18 n); score: 0.789 Intron 2 85363 86561 (1199 n); Pd: 0.666 (s: 0), Pa: 0.737 (s: 0) Exon 3 86562 86571 ( 10 n); cDNA 152 161 ( 10 n); score: 0.700 MATCH C08HBa0235H18.1+ SGN-E376754+ 0.928 161 0.243 C PGS_C08HBa0235H18.1+_SGN-E376754+ (81995 82126,85344 85362,86562 86571) Alignment (genomic DNA sequence = upper lines): TTTTGGCTTA AAATAAGTTT TTTTTAACTT AAAATAAGTT ATTTTGAGTA TTGCCAAACA 82054 |||| ||| |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| TTTTTTTTTA AAATAAGTTT TTTTTAACTT AAAATAAGTT ATTTTGAGTA TTGTCAAACA 60 GCTAAACAAG TCAAAAATCA GCTTTT-AAG TCAGTTTGAC CAGCTTTTAA GCTGAGCCAA 82113 |||||| ||| ||||||| || |||||| ||| |||||||||| ||| |||||| |||||||||| GCTAAATAAG TCAAAAACCA GCTTTTTAAG TCAGTTTGAC CAGTTTTTAA GCTGAGCCAA 120 ACAGGCTCTA AGAGTAATTC TAAGATCCAT CTTTATAGTA AATATAATAA AAGATGTATA 82173 |||||||||| ||| ACAGGCTCTA AGA....... .......... .......... .......... .......... 133 TTTAATTTGC TATATCAAGT TGCATGCTAA TAATTTTTCA TGTAACTAGT TTCACTTGTT 82233 .......... .......... .......... .......... .......... .......... 133 ATTTTGGAAA AGTCGAGTGT AATTATTTTT TTCAAATTTA ATAATTAATA TGATGATAAA 82293 .......... .......... .......... .......... .......... .......... 133 TTTTAAAAAA TTACTTTATC AACTATAGAA ATCGAAATTC TCTTATGTTA AATTTTCTCC 82353 .......... .......... .......... .......... .......... .......... 133 ATTCAAATTT CTTTTCAATT GTGTGATTTT TAAAGCCAAA GGAATACTTG AATAAGTGTG 82413 .......... .......... .......... .......... .......... .......... 133 CAAATTATAG TTTTATCTTT CTTTTCACTT TATTTTTATG ATAGTTTAAT CAGGTTATCG 82473 .......... .......... .......... .......... .......... .......... 133 ATTTACTCAT TATTGTGTCA TAAGGTTACT TTTATTTTAA ATTTGTATGG AAATGAGATG 82533 .......... .......... .......... .......... .......... .......... 133 TATAATTCAA GTTTTGTTAG TAAGATGGAC GAAATTACAT AAGAGTTAAT TGTCCAACTG 82593 .......... .......... .......... .......... .......... .......... 133 TCCTACCTAT ACATGGAAAA TTTTCCTTTT CTTATCCAAC AACTAAAGAA GGAAAATTTG 82653 .......... .......... .......... .......... .......... .......... 133 GAAACAAATT TTTCTGTTCT TTTAGTATTT ATCCAATAAG GTCATATCAT GTTAGAGCCA 82713 .......... .......... .......... .......... .......... .......... 133 ATTATTAAAT ATATATACTA GACATCGGTA TCTATTCACT GATTCAATAT CTGTTATTTT 82773 .......... .......... .......... .......... .......... .......... 133 TTTATTTCAG TTTATGCGAT ATAGATGGAA TTAAATAGTA GATTAAATTT TGACATGAAT 82833 .......... .......... .......... .......... .......... .......... 133 TTTAAAAAAA TTTAAGTAGT TGTTGTAATT TATAGTATTT TACTGTAATT TTTAAATAAT 82893 .......... .......... .......... .......... .......... .......... 133 ATATATTACT TCTTTTGTCC CAATGTAAGT GATATCCCAA TGTAAGTGAT ACCGATAGAA 82953 .......... .......... .......... .......... .......... .......... 133 TTTCAAGAGT CAATCAAATG TTGTTAATTA TTGAATTTAC AATATTTTCT ACGTAGTTTT 83013 .......... .......... .......... .......... .......... .......... 133 CAAATTAAAT ATTTAATGTT ACTTCTTTTG ATTATTGTAA TTTATAGTAA TTTTTACGTA 83073 .......... .......... .......... .......... .......... .......... 133 TTTTTTAATA ATATATGTTA CTTCTCTTAT CCCAATGTAT GTAGCACAAA TAGAATTTCA 83133 .......... .......... .......... .......... .......... .......... 133 AGAGTCAATC AAATGTTGTT AATTATTGAG ATTTACAATA TTTTCTATCG TAGTTTCCAA 83193 .......... .......... .......... .......... .......... .......... 133 ATTAAATAAT ACATGTTACT TCTTCTATCC TTTTTATGTG ACATAGATAG ATTAATTTTA 83253 .......... .......... .......... .......... .......... .......... 133 TGAATCAATC GAAATTTTTA TTTATTTTTT ATAAATATTT TAAATTGTCA GTTAAAACAT 83313 .......... .......... .......... .......... .......... .......... 133 TTAAAATCAA GACAAACAAA TTAAAACGGA AGAACCACCG AAAAAGAAAA AATAATGCAG 83373 .......... .......... .......... .......... .......... .......... 133 CTGTCAGGTA GGGTCGACCA TGACCTCCCT GGTTACTATC ACTTATATAT ATAAAAAAAA 83433 .......... .......... .......... .......... .......... .......... 133 ATTAAAATCA AGACAAACAA ATTAAAACGG AAGAATCATA GAAAAAGGTA AATAGTGTAG 83493 .......... .......... .......... .......... .......... .......... 133 CTATCGCGCA AGCATGCATG TCGATCATGA CCTGTCTGTT TGTTGTCACT TAAATATAAT 83553 .......... .......... .......... .......... .......... .......... 133 AAAATTTATA AATCAAAACA AACAAATTAA AACAAATAAA AAAATAAAAA TATAAATGCC 83613 .......... .......... .......... .......... .......... .......... 133 CACCAGACAT ATCAATCATG ACCTGCCTAG TTATTGTCAC TCGTATATGT GTAATTTCTT 83673 .......... .......... .......... .......... .......... .......... 133 TCCTCTTTTT GCTTTTTCCT TCTATTTCAT CTAGAAGTTC CATTCCTAAT ATGTTACCAA 83733 .......... .......... .......... .......... .......... .......... 133 ATTTTATTTT TAAAAAATAA TTATCACTGA AATGAGTTAA TTTGTGCAAA TTTCAATTAT 83793 .......... .......... .......... .......... .......... .......... 133 TTTGATTAAA TAACTACTAT CTGCTATCCA AAAATTGAAT TACACTTTTT GAAGGGATTT 83853 .......... .......... .......... .......... .......... .......... 133 TATTAAGAGT AAATTAACAC ATGATAATAG TTATGATAAT TAAGATATAT TGATTAACCT 83913 .......... .......... .......... .......... .......... .......... 133 ATGTGGGATT ATACCTCTCA ATTATAATGC TTTTTGACTA ACTTTTTTTT TTTGTTCTTT 83973 .......... .......... .......... .......... .......... .......... 133 TAAATTCTTA CGTATTCCAA ACGGTTCTAT CCTCTAACAC AAAATCCCAC TTAAAAATCA 84033 .......... .......... .......... .......... .......... .......... 133 GGAAAACTCA GAAAATAAAA AAATGCACAT TTTAATTATA TTGATCAATT ATTTAATCAA 84093 .......... .......... .......... .......... .......... .......... 133 ATGAAGATAA TTATTTAGTA ACTATCTTCA TTTATATTTT AATTGTATTA GTGAGAAACA 84153 .......... .......... .......... .......... .......... .......... 133 GAAAAAATAA TATTACTAGT GTTTTTACAC AGGAAAATTA GTAAGCTTTT TAATATTTCG 84213 .......... .......... .......... .......... .......... .......... 133 GTAAGAATAC TTTTCTAGTG AGCTAATTCG ACGAGAAAAA CTTTTATCAT CTACATGTAT 84273 .......... .......... .......... .......... .......... .......... 133 TGTAGAAGAA ATATGGAAAC TGCTAAGGAG GTTCTGTAGG GTTACGATAA TTTGAAAAGT 84333 .......... .......... .......... .......... .......... .......... 133 TTTAGGATTA TTACCAAAAG CAATCAATTA ATCAGTTAGC TGCATGTCTC AATCATAAAC 84393 .......... .......... .......... .......... .......... .......... 133 TAGTTATAGT GATAAAATAA TTAATAGTCA ACCATACTAA TAATTAATTA ATAAAATGAG 84453 .......... .......... .......... .......... .......... .......... 133 ACCAAGAAAT AAATTGAGCC TTTATATTAA CGAACCTTCC TAGTGCTCAC TTCTCAAATA 84513 .......... .......... .......... .......... .......... .......... 133 TTAGAAGTTG CTAAGAAGAA AAATTAAGGA AAAATTAATA CACGTCTGGT GTTTCCCTTA 84573 .......... .......... .......... .......... .......... .......... 133 TTTTTAATTT TTTATTTTAT TTTTAAAATC TCTAAAATTC CTTACGTCTT TAATGTATCC 84633 .......... .......... .......... .......... .......... .......... 133 GAACTACATA TCAATGAATT TGAACCAACA TTTAATGTAT TCAAGCTACA TATATATATA 84693 .......... .......... .......... .......... .......... .......... 133 TTCATTTATT TTATAATGTA TCCGAGCTAC ATATTATGTA TCAGATCTAG TTTTAGTGTA 84753 .......... .......... .......... .......... .......... .......... 133 TCCAAACTGC ATATGTGTGT ATTCAGTTTA TGTTATAATG TATCCGAGAT ACCCTTTAAT 84813 .......... .......... .......... .......... .......... .......... 133 GTATCCAATT TGTATTACTT TTTAAGGGAT TAATGTAGTT ACAAAACTAA ATAGGAATAA 84873 .......... .......... .......... .......... .......... .......... 133 ATTATGATTT TCATATTAAA ACTATGTGAT TCCTAAAACT TATCCGAAAA AAGTCCACGA 84933 .......... .......... .......... .......... .......... .......... 133 GAAGATCGCC AGGTCTCTTT CTGAGACAGT GGCAAACTAG CTCAGACATC ATAATTATAA 84993 .......... .......... .......... .......... .......... .......... 133 GAAAATAAGA TCGAGTTTAT TTCAATATGA TTAAAATATT CATATTCTTA CTTAATTTAA 85053 .......... .......... .......... .......... .......... .......... 133 AGACGTTATT TACATCTTGA AAAACCTGCA AAATTCTTAT ATATTATCAT AGCTTCCATA 85113 .......... .......... .......... .......... .......... .......... 133 GTTAAGTGCT CTTAGTAAGG AATGTGTAGC AATAGACTGT GAAAATGAAA TGTGCTGCCT 85173 .......... .......... .......... .......... .......... .......... 133 CAATTACTAT AATTATTTTT GCAAGCATAG GTTATGTTGT TATTGCTAGT ATAAAGTTGC 85233 .......... .......... .......... .......... .......... .......... 133 TCCATGTGTC TTAAATCACA TCTTTTATGG TGCATTAATT AACAAGGTAG GTAAGTTGAG 85293 .......... .......... .......... .......... .......... .......... 133 ACTTCTATTT GAATTTTCTC ATATATAATG ACATAAAATT TCAATAATGT GGATGCAAAG 85353 |||| ||||| .......... .......... .......... .......... .......... GGAT-CAAAG 142 TAAGGACAGG CATACATGAT ATGTCACAAT GTTGATTTGC TAACTAGGTA TGAGATGTAG 85413 ||| ||| AAAGTACAC. .......... .......... .......... .......... .......... 151 ATATACTATA ATCTGGGAAT GTTACTTTTA CTTTTATAGT TGAGACCCAG AGTTTACAAC 85473 .......... .......... .......... .......... .......... .......... 151 ATTGATCTAC ATCTTCAAAG TTAGAAGCAA ACATGACAAA ATTTTCTGAG AATAATACTC 85533 .......... .......... .......... .......... .......... .......... 151 CCAGAATGGA GTACCCTCTC ATTCTTCATT TAAATGCAAT TTGCATATAT GCAACTTTTA 85593 .......... .......... .......... .......... .......... .......... 151 ACGAGTACCT TTAATGGGCG ATATGCTGTT AGGAAGGCGT CCATCATCAC CATCCCACTT 85653 .......... .......... .......... .......... .......... .......... 151 GCCTAAAATC TGATGTTGCG TCTTGGATTT TCTTCTTTAA AGATCTGAAA CTGCTACTGC 85713 .......... .......... .......... .......... .......... .......... 151 TTTTGTCAGA CCAACGAAAC GAAGCACTCC TTTTAATGAG ATCTGCCATA AGTGGCGACT 85773 .......... .......... .......... .......... .......... .......... 151 TCATAGAGGA ATCCTCCACT GCAGCCCCAC TGTACACTGC GCTCCAAAAA AAAAAATTGG 85833 .......... .......... .......... .......... .......... .......... 151 ATTTCAGGAG GTGAAATATA TACTTTATCA TATCAGCCTT TTGGGAAACC ATAACAAACT 85893 .......... .......... .......... .......... .......... .......... 151 AAAAGGATTC GAAAGGGCAC CTGACGATGG TGGGAGGTGG TAATAGCGCT TCAAGAATTT 85953 .......... .......... .......... .......... .......... .......... 151 TGAAGCTTCT CTCTCCTTCT TGTGACATAA AACGCGTATC AAGGTGTGTG CATCTCCCAG 86013 .......... .......... .......... .......... .......... .......... 151 ATGTCTGTGG CCATATTTAT GTGCTTCAAG TCCTGAACTG TGTTCACTAG AAGTCATCAA 86073 .......... .......... .......... .......... .......... .......... 151 CAATTGGATC ACAGATTCAG CCTGCTACGA AAACCAAAAT ATTAAATAGG TCCCACAGCA 86133 .......... .......... .......... .......... .......... .......... 151 TGCATACAGA AACAGGCTAA AAGCTTTAAT TAATTCTTAA CAAACCCGGA GGGAAAATAA 86193 .......... .......... .......... .......... .......... .......... 151 ACTGAGGATT TGATGAGCGA ATCTCGCTTC TTCTTCAACT AGTGATCGGG GAAGCCCTTC 86253 .......... .......... .......... .......... .......... .......... 151 TCCGTCAGCA ACGAACAAGT CCTAGAAAGT GAAAGAAACA TAATTGTTGT TTCTCAAATA 86313 .......... .......... .......... .......... .......... .......... 151 GTCGCTGAAT ATCTCTTGCA AAAGATATCT AAAATCCAAG CATAATAGAA GCAAAAGATC 86373 .......... .......... .......... .......... .......... .......... 151 CATATAGGCA AATATCAACT AGCTGAGTTA CATCACCAAT GGATAAATTC AGTGTGGTCA 86433 .......... .......... .......... .......... .......... .......... 151 GGACTCTTTA AGATCTGGTT AAAAAAATTT ACCTTGGTTT CGGGGAAGTG TGAAATTCAG 86493 .......... .......... .......... .......... .......... .......... 151 AAAACTTCTA TTATGAAAAT ACAAGAAAAA TTATTTAGTA TTGGAAATCA AGGAATTAAA 86553 .......... .......... .......... .......... .......... .......... 151 ATAATTAGGA AATGAAAG 86571 | | | |||| ........AA ACTTAAAG 161 hqPGS_C08HBa0235H18.1+_SGN-E376754+ (81995 82126) ******************************************************************************** EST sequence 143 +strand 385 n (File: SGN-E217478+) 1 TTTTTTTTTT TTTTTGTTGG GGCTTAAAAT AAGTTTTTTT TAACTTAAAA TAAACCATTT 61 TGAGTATTGT CAAACAGTTA AATAAGTTAA AAAAAACTAT TTTGAGTATT GCCAAACAGT 121 TAAATAAGTC AAAAACCAGC TTTTAAGCTG AGCCAAACAG GCTCTAAGTA TCTCTGCTTA 181 AAATAACTGT GACATCTTTG CTTTTCTGGG AGTTTGAAAC CCAAAATCAG GTATCCTCAG 241 TCCTTTATCT GCCAATTGAT GCTAGTCAAG AAGACTTCAT GAATTTTCAG CATCCATCCG 301 TTCAATCACA CGACGTGCTT CTTCCTCTGT ACCAGGGACG ACATTCCTAA CTCGTGCACC 361 ATTTTTCAGT GAATCTTGTT GGACA Predicted gene structure (within gDNA segment 81199 to 84905): Exon 1 82019 82082 ( 64 n); cDNA 83 146 ( 64 n); score: 0.891 PPA cDNA 18 1 MATCH C08HBa0235H18.1+ SGN-E217478+ 0.891 64 0.166 C PGS_C08HBa0235H18.1+_SGN-E217478+ (82019 82082) Alignment (genomic DNA sequence = upper lines): TAACTTAAAA TAAGTTATTT TGAGTATTGC CAAACAGCTA AACAAGTCAA AAATCAGCTT 82078 ||| |||||| || ||||| |||||||||| ||||||| || || ||||||| ||| |||||| TAAGTTAAAA AAAACTATTT TGAGTATTGC CAAACAGTTA AATAAGTCAA AAACCAGCTT 142 TTAA 82082 |||| TTAA 146 hqPGS_C08HBa0235H18.1+_SGN-E217478+ (82019 82082) ******************************************************************************** EST sequence 267 +strand 397 n (File: SGN-E229134+) 1 TTTTTTTTTT TTTTTTTTTT GGCTTAAAAT AAGTTTTTTT TAACTTAAAA TAAACCATTT 61 TGAGTATTGT CAAACAGTTA AATAAGTTAA AAAAAACTAT TTTGAGTATT GCCAAACAGT 121 TAAATAAGTC AAAAACCAGC TTTTAAGCTG AGCCAAACAG GCTCTAAGTA TCTCTGCTTA 181 AAATAACTGT GACATCTTTG CTTTTCTGGG AGTTTGAAAC CCAAAATCAG GTATCCTCAG 241 TCCTTTATCT GCCAATTGAT GCTAGTCAAG AAGACTTCAT GAATTTTCAG CATCCATCCG 301 TTCAATCACA CGACGTGCTT CTTCCTCTGT ACCAGGGACG ACATTCCTAA CTCGTGCACC 361 ATTTTTTCAG TGAATCTTGT TGGACAGTGA AAGTGAA Predicted gene structure (within gDNA segment 81235 to 85025): Exon 1 82019 82082 ( 64 n); cDNA 83 146 ( 64 n); score: 0.891 PPA cDNA 20 1 MATCH C08HBa0235H18.1+ SGN-E229134+ 0.891 64 0.161 C PGS_C08HBa0235H18.1+_SGN-E229134+ (82019 82082) Alignment (genomic DNA sequence = upper lines): TAACTTAAAA TAAGTTATTT TGAGTATTGC CAAACAGCTA AACAAGTCAA AAATCAGCTT 82078 ||| |||||| || ||||| |||||||||| ||||||| || || ||||||| ||| |||||| TAAGTTAAAA AAAACTATTT TGAGTATTGC CAAACAGTTA AATAAGTCAA AAACCAGCTT 142 TTAA 82082 |||| TTAA 146 hqPGS_C08HBa0235H18.1+_SGN-E229134+ (82019 82082) ******************************************************************************** EST sequence 266 +strand 468 n (File: SGN-E228654+) 1 TTTTTTTTTT TTTTTTTTTG GGCTTAAAAT AAGTTTTTTT TAACTTAAAA TAAACCATTT 61 TGAGTATTGT CAAACAGTTA AATAAGTTAA AAAAAACTAT TTTGAGTATT GCCAAACAGT 121 TAAATAAGTC AAAAACCAGC TTTTAAGCTG AGCCAAACAG GCTCTAAGTA TCTCTGCTTA 181 AAATAACTGG GACATCTTTG CTTTTCTGGG AGTTTGAAAC CCAAAATCAG GTATCCTCAG 241 TCCTTTATCT GCCAATTGAT GCTAGTCAAG AAGACTTCAT GAATTTTCAG CATCCATCCG 301 TTCAATCACA CGACGTGCTT CTTCCTCTGT ACCAGGGACG ACATTCCTAA CTCGTGCACC 361 ATTTTTCAGT GAATCTTGTT GGACAGTGAA AGTGAAATAG AAATTGTTTG AAACCTCGCT 421 AGACCGCAAC TCAGGTCTCA TGACATGAGC TACCACTTCT ACATTGAT Predicted gene structure (within gDNA segment 81199 to 85735): Exon 1 82019 82082 ( 64 n); cDNA 83 146 ( 64 n); score: 0.891 PPA cDNA 19 1 MATCH C08HBa0235H18.1+ SGN-E228654+ 0.891 64 0.137 C PGS_C08HBa0235H18.1+_SGN-E228654+ (82019 82082) Alignment (genomic DNA sequence = upper lines): TAACTTAAAA TAAGTTATTT TGAGTATTGC CAAACAGCTA AACAAGTCAA AAATCAGCTT 82078 ||| |||||| || ||||| |||||||||| ||||||| || || ||||||| ||| |||||| TAAGTTAAAA AAAACTATTT TGAGTATTGC CAAACAGTTA AATAAGTCAA AAACCAGCTT 142 TTAA 82082 |||| TTAA 146 hqPGS_C08HBa0235H18.1+_SGN-E228654+ (82019 82082) ******************************************************************************** EST sequence 452 -strand 387 n (File: SGN-E577960-) 1 AACTTAAAAT AAGCTGTTTT GAGTATTGCC AAACAGTTAA ATAAGTCAAA AACCAGCTTT 61 TAAGTCAGTT TGACCAGCTT TTAAGCTGAG CCAAACAGGC TCTAAGTTGC TCAAAAGTGG 121 TTTTTGGAGC CTTTGGGAGC TTCGAGTGTC GGAATAAAGT TCCATCAATA CCATCAGTAC 181 CGGAATGTGG AATCTGAGTT GTGAGAGTTG TTCGTTTCGT ATTCTGAGTC TTTTTGAGGA 241 TTTGAGGTCC TAAGTTGTGA AATTGTGGGC TTTTGGGTTG ACTTTGGTGA ACATTCGGGG 301 TTTGGATGCT CGGCTCAGAA TTTCCGAGTG TTTTGTTGAA TTTGGGGGAT GATTTTTGAG 361 AGGTTTCGAG CTTGTTTTAC ACTTTTG Predicted gene structure (within gDNA segment 81266 to 85535): Exon 1 82020 82125 ( 106 n); cDNA 1 106 ( 106 n); score: 0.953 MATCH C08HBa0235H18.1+ SGN-E577960- 0.953 106 0.274 C PGS_C08HBa0235H18.1+_SGN-E577960- (82020 82125) Alignment (genomic DNA sequence = upper lines): AACTTAAAAT AAGTTATTTT GAGTATTGCC AAACAGCTAA ACAAGTCAAA AATCAGCTTT 82079 |||||||||| ||| | |||| |||||||||| |||||| ||| | |||||||| || ||||||| AACTTAAAAT AAGCTGTTTT GAGTATTGCC AAACAGTTAA ATAAGTCAAA AACCAGCTTT 60 TAAGTCAGTT TGACCAGCTT TTAAGCTGAG CCAAACAGGC TCTAAG 82125 |||||||||| |||||||||| |||||||||| |||||||||| |||||| TAAGTCAGTT TGACCAGCTT TTAAGCTGAG CCAAACAGGC TCTAAG 106 hqPGS_C08HBa0235H18.1+_SGN-E577960- (82020 82125) ******************************************************************************** EST sequence 1071 +strand 822 n (File: SGN-E544497+) 1 GGGTATTACT AGATGGAGGT CCATCACGTG CATTTTCTGA ATTTGATGTT GTCATGATGG 61 AAGATGACCT CAATATATTA AAAGACTTGT TCGTTGCTGA CGGAGAAGGG CTTCCCCGAT 121 CACTAGTTGA AGAAGAAGCG AGATTCGCTC ATCAAATCCT CAGTTTATTT TCCCTCCGGG 181 CTGAATCTGT GATCCAATTG TTGATGACTT CTAGTGAACA CAGTTCAGGA CTTGAAGCAC 241 ATAAATATGG CCACAGACAT CTGGGAGATG CACACACCTT GATACGCGTT TTATGTCACA 301 AGAAGGAGAG AGAAGCTTCA AAATTCTTGA AGCGCTATTA CCACCTCCCA CCATCGTCAG 361 TGTACAGTGG GGCTGCAGTG GAGGATTCCT CTATGAAGTC GCCACTTATG GCAGATCTCA 421 TTAAAAGGAG TGCTTCGTTT CGTTGGTCTG ACAAAAGCAG TAGCAGTTTC AGATCTTTAA 481 AGAAGAAAAT CCAAGACGCA ACATCAGATT TTAGGCAAGT GGGATGGTGA TGATGGACGC 541 CTTCCTAACA GCATATCGCC CATTAAAGGT ACTCGTTAAA AGTTGCATAT ATGCAAATTG 601 CATTTAAATG AAGAATGAGA GGGTACTCCA TTCTGGGAGT ATTATTCTCA GAAAATTTTG 661 TCATGTTTGC TTCTAACTTT GAAGATGTAG ATCAATGTTG TAAACTCTGG GTCTCAACTA 721 TAAAAGTAAA AGTAACATTC CCAGATTATA GTATATCTAC ATCTCATACC TAGTTAGCAA 781 ATCAACATTG TGACATATCA TGTATGCCTG TCCTTACTTT GC Predicted gene structure (within gDNA segment 88630 to 84738): Exon 1 88030 87948 ( 83 n); cDNA 1 83 ( 83 n); score: 1.000 Intron 1 87947 86275 (1673 n); Pd: 1.000 (s: 1.00), Pa: 0.997 (s: 1.00) Exon 2 86274 86179 ( 96 n); cDNA 84 179 ( 96 n); score: 1.000 Intron 2 86178 86095 ( 84 n); Pd: 0.951 (s: 1.00), Pa: 0.978 (s: 1.00) Exon 3 86094 85914 ( 181 n); cDNA 180 360 ( 181 n); score: 1.000 Intron 3 85913 85810 ( 104 n); Pd: 0.902 (s: 1.00), Pa: 0.972 (s: 1.00) Exon 4 85809 85348 ( 462 n); cDNA 361 822 ( 462 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E544497+ 1.000 822 1.000 C PGS_C08HBa0235H18.1-_SGN-E544497+ (88030 87948,86274 86179,86094 85914,85809 85348) Alignment (genomic DNA sequence = upper lines): GGGTATTACT AGATGGAGGT CCATCACGTG CATTTTCTGA ATTTGATGTT GTCATGATGG 87971 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGTATTACT AGATGGAGGT CCATCACGTG CATTTTCTGA ATTTGATGTT GTCATGATGG 60 AAGATGACCT CAATATATTA AAAGTAAGTT CCTCTTCTAA CTTTCTTATT ACTTGTGGTT 87911 |||||||||| |||||||||| ||| AAGATGACCT CAATATATTA AAA....... .......... .......... .......... 83 ATTGTGCTTG TTAAAGCAGC AGTTGAATTT GGTGTTCTCA AGCAGTATTT ATTTCACTTG 87851 .......... .......... .......... .......... .......... .......... 83 CATAGAACAC TTCCCTTCCT GGTGTAGTGT TCCAATGATA TCTTTTTCCT ATTCAAAATG 87791 .......... .......... .......... .......... .......... .......... 83 GTACTGTGAA TTAAACTGAA GTTACATACG GGACAATTGA GAACTTCCTT TGCCTCTTGC 87731 .......... .......... .......... .......... .......... .......... 83 TACCTTCTTC TAAGAAGGAT GTCTCATAAG TTCTGTAATC TTCTAAAGGC AAGAAGTCAC 87671 .......... .......... .......... .......... .......... .......... 83 ACTGAGACTC CCAGAGTAGC TGTTAGTATT ATTAATAAGA GAAACTCTGT TATAGCCATT 87611 .......... .......... .......... .......... .......... .......... 83 TGTGTACGTC ATATGTACTA TACAGATTAA GGAATACATA GAGTTGCTTG CAATTTCAGT 87551 .......... .......... .......... .......... .......... .......... 83 TCTTGACTGT TGCCAGCAAG TATAGAAAAA GTGTATATTC TAGGTAGTGT CTTCTTTCAA 87491 .......... .......... .......... .......... .......... .......... 83 ATAATAGATT CTTTTTAGGT GTGATATCTT CTGAAAAATT CACGTTCACC TTGAGTTTTT 87431 .......... .......... .......... .......... .......... .......... 83 GTAGAGAACT CTTGTCATGT TCGTCAGTTT AATATTTAGC AGCCCTTAGA AAATATAGAA 87371 .......... .......... .......... .......... .......... .......... 83 TCTGAATTGT TTTGGTATAC TGTTTCCAAG AAGTACCTTA GTATGCCTAA TTTATGTCGA 87311 .......... .......... .......... .......... .......... .......... 83 AGGTGCGGCT CAGGTAAACC TTCAATCTTG CAACCTCATC AACGTCATCA CCAGTGACCA 87251 .......... .......... .......... .......... .......... .......... 83 CGATATTCTG AACATTTACT GATCTTCTTG AAGGCCATTT CATTATTTGG TTTTGACAAA 87191 .......... .......... .......... .......... .......... .......... 83 AGATTCAATA GCGTATTTAT GCACCTCTGT TAAACTTTCC TTTTTGTAAT GATGTCATCA 87131 .......... .......... .......... .......... .......... .......... 83 TCTGTTTGAG TCAGCTTAAA GTCTTCTTAC TTGTCAGGAA TATCATGTAT CCAATCAATT 87071 .......... .......... .......... .......... .......... .......... 83 CTTTTGAAAA ATTGTTCACA ATCCTCTGAT ATGTTTGACA GATATTCTTA GTTAGGTCAT 87011 .......... .......... .......... .......... .......... .......... 83 TCAAGTTTCA ACTAGGACAA GGATTTCTGT AACTATGTAG ATTCGTAATA AGTTATCTTT 86951 .......... .......... .......... .......... .......... .......... 83 TCTCTGAGCT AATGATCCTT GTCTCTCGTT CTCTTATTTA TTATAGTTCC ATAATTGTTA 86891 .......... .......... .......... .......... .......... .......... 83 TTTTTAGTAA CCAAAAGCCT GCATTGACGA ACCTCATCTC TAATTTTGGC CCACAATGTG 86831 .......... .......... .......... .......... .......... .......... 83 GTGTATTAGC TTTGGTCATT GGGCCCTAGG CCTTTGATCT AGTGGTAAGA GCGTAAAGCA 86771 .......... .......... .......... .......... .......... .......... 83 TGATGTGCGT GTTAGTCACA GTTCATATTT CGAACTTGGA CCCTGACAAA GCCGCGTTCA 86711 .......... .......... .......... .......... .......... .......... 83 TTATCCAGAG TTTTGAACCA TGCGCTATAT TGTCCCTTGG GAATTTCTTA GTTATAAAAG 86651 .......... .......... .......... .......... .......... .......... 83 ATATATGGCT GATCATTGAA ATTTAATATT CTAGACAATT TTTTTCTTGT AGGCTGGTTT 86591 .......... .......... .......... .......... .......... .......... 83 AATTGTGTTT GACCTTTTGC TTTCATTTCC TAATTATTTT AATTCCTTGA TTTCCAATAC 86531 .......... .......... .......... .......... .......... .......... 83 TAAATAATTT TTCTTGTATT TTCATAATAG AAGTTTTCTG AATTTCACAC TTCCCCGAAA 86471 .......... .......... .......... .......... .......... .......... 83 CCAAGGTAAA TTTTTTTAAC CAGATCTTAA AGAGTCCTGA CCACACTGAA TTTATCCATT 86411 .......... .......... .......... .......... .......... .......... 83 GGTGATGTAA CTCAGCTAGT TGATATTTGC CTATATGGAT CTTTTGCTTC TATTATGCTT 86351 .......... .......... .......... .......... .......... .......... 83 GGATTTTAGA TATCTTTTGC AAGAGATATT CAGCGACTAT TTGAGAAACA ACAATTATGT 86291 .......... .......... .......... .......... .......... .......... 83 TTCTTTCACT TTCTAGGACT TGTTCGTTGC TGACGGAGAA GGGCTTCCCC GATCACTAGT 86231 |||| |||||||||| |||||||||| |||||||||| |||||||||| .......... ......GACT TGTTCGTTGC TGACGGAGAA GGGCTTCCCC GATCACTAGT 127 TGAAGAAGAA GCGAGATTCG CTCATCAAAT CCTCAGTTTA TTTTCCCTCC GGGTTTGTTA 86171 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || TGAAGAAGAA GCGAGATTCG CTCATCAAAT CCTCAGTTTA TTTTCCCTCC GG........ 179 AGAATTAATT AAAGCTTTTA GCCTGTTTCT GTATGCATGC TGTGGGACCT ATTTAATATT 86111 .......... .......... .......... .......... .......... .......... 179 TTGGTTTTCG TAGCAGGCTG AATCTGTGAT CCAATTGTTG ATGACTTCTA GTGAACACAG 86051 |||| |||||||||| |||||||||| |||||||||| |||||||||| .......... ......GCTG AATCTGTGAT CCAATTGTTG ATGACTTCTA GTGAACACAG 223 TTCAGGACTT GAAGCACATA AATATGGCCA CAGACATCTG GGAGATGCAC ACACCTTGAT 85991 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCAGGACTT GAAGCACATA AATATGGCCA CAGACATCTG GGAGATGCAC ACACCTTGAT 283 ACGCGTTTTA TGTCACAAGA AGGAGAGAGA AGCTTCAAAA TTCTTGAAGC GCTATTACCA 85931 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACGCGTTTTA TGTCACAAGA AGGAGAGAGA AGCTTCAAAA TTCTTGAAGC GCTATTACCA 343 CCTCCCACCA TCGTCAGGTG CCCTTTCGAA TCCTTTTAGT TTGTTATGGT TTCCCAAAAG 85871 |||||||||| ||||||| CCTCCCACCA TCGTCAG... .......... .......... .......... .......... 360 GCTGATATGA TAAAGTATAT ATTTCACCTC CTGAAATCCA ATTTTTTTTT TTGGAGCGCA 85811 .......... .......... .......... .......... .......... .......... 360 GTGTACAGTG GGGCTGCAGT GGAGGATTCC TCTATGAAGT CGCCACTTAT GGCAGATCTC 85751 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| .TGTACAGTG GGGCTGCAGT GGAGGATTCC TCTATGAAGT CGCCACTTAT GGCAGATCTC 419 ATTAAAAGGA GTGCTTCGTT TCGTTGGTCT GACAAAAGCA GTAGCAGTTT CAGATCTTTA 85691 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAAAAGGA GTGCTTCGTT TCGTTGGTCT GACAAAAGCA GTAGCAGTTT CAGATCTTTA 479 AAGAAGAAAA TCCAAGACGC AACATCAGAT TTTAGGCAAG TGGGATGGTG ATGATGGACG 85631 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGAAGAAAA TCCAAGACGC AACATCAGAT TTTAGGCAAG TGGGATGGTG ATGATGGACG 539 CCTTCCTAAC AGCATATCGC CCATTAAAGG TACTCGTTAA AAGTTGCATA TATGCAAATT 85571 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTCCTAAC AGCATATCGC CCATTAAAGG TACTCGTTAA AAGTTGCATA TATGCAAATT 599 GCATTTAAAT GAAGAATGAG AGGGTACTCC ATTCTGGGAG TATTATTCTC AGAAAATTTT 85511 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCATTTAAAT GAAGAATGAG AGGGTACTCC ATTCTGGGAG TATTATTCTC AGAAAATTTT 659 GTCATGTTTG CTTCTAACTT TGAAGATGTA GATCAATGTT GTAAACTCTG GGTCTCAACT 85451 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCATGTTTG CTTCTAACTT TGAAGATGTA GATCAATGTT GTAAACTCTG GGTCTCAACT 719 ATAAAAGTAA AAGTAACATT CCCAGATTAT AGTATATCTA CATCTCATAC CTAGTTAGCA 85391 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAAAAGTAA AAGTAACATT CCCAGATTAT AGTATATCTA CATCTCATAC CTAGTTAGCA 779 AATCAACATT GTGACATATC ATGTATGCCT GTCCTTACTT TGC 85348 |||||||||| |||||||||| |||||||||| |||||||||| ||| AATCAACATT GTGACATATC ATGTATGCCT GTCCTTACTT TGC 822 hqPGS_C08HBa0235H18.1-_SGN-E544497+ (88030 87948,86274 86179,86094 85914,85809 85348) ******************************************************************************** EST sequence 830 +strand 557 n (File: SGN-E307203+) 1 GGTATTACTA GATGGAGGTC CATCACGTGC ATTTTCTGAA TTTGATGTTG TCATGATGGA 61 AGATGACCTC AATATATTAA AAGACTTGTT CGTTGCTGAC GGAGAAGGGC TTCCCCGATC 121 ACTAGTTGAA GAAGAAGCGA GATTCGCTCA TCAAATCCTC AGTTTATTTT CCCTCCGGGC 181 TGAATCTGTG ATCCAATTGT TGATGACTTC TAGTGAACAC AGTTCAGGAC TTGAAGCACA 241 TAAATATGGC CACAGACATC TGGGAGATGC ACACACCTTG ATACGCGTTT TATGTCACAA 301 GAAGGAGAGA GAAGCTTCAA AATTCTTGAA GCGCTATTAC CACCTCCCAC CATCGTCAGT 361 GTACAGTGGG GCTGCAGTGG AGGATTCCTC TATGAAGTCG CCACTTATGG CAGATCTCAT 421 TAAAAGGAGT GCTTCGTTTC GTTGGTCTGA CAAAAGCAGT AGCAGTTTCA GATCTTTAAA 481 GAAGAAAATC CAAGACGCAA CATCAGATTT TAGGCAAGTG GGATGGTGAT GATGGACGCC 541 TTCCTAACAG CATATCG Predicted gene structure (within gDNA segment 88629 to 85002): Exon 1 88029 87948 ( 82 n); cDNA 1 82 ( 82 n); score: 1.000 Intron 1 87947 86275 (1673 n); Pd: 1.000 (s: 1.00), Pa: 0.997 (s: 1.00) Exon 2 86274 86179 ( 96 n); cDNA 83 178 ( 96 n); score: 1.000 Intron 2 86178 86095 ( 84 n); Pd: 0.951 (s: 1.00), Pa: 0.978 (s: 1.00) Exon 3 86094 85914 ( 181 n); cDNA 179 359 ( 181 n); score: 1.000 Intron 3 85913 85810 ( 104 n); Pd: 0.902 (s: 1.00), Pa: 0.972 (s: 1.00) Exon 4 85809 85612 ( 198 n); cDNA 360 557 ( 198 n); score: 1.000 MATCH C08HBa0235H18.1- SGN-E307203+ 1.000 557 1.000 C PGS_C08HBa0235H18.1-_SGN-E307203+ (88029 87948,86274 86179,86094 85914,85809 85612) Alignment (genomic DNA sequence = upper lines): GGTATTACTA GATGGAGGTC CATCACGTGC ATTTTCTGAA TTTGATGTTG TCATGATGGA 87970 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTATTACTA GATGGAGGTC CATCACGTGC ATTTTCTGAA TTTGATGTTG TCATGATGGA 60 AGATGACCTC AATATATTAA AAGTAAGTTC CTCTTCTAAC TTTCTTATTA CTTGTGGTTA 87910 |||||||||| |||||||||| || AGATGACCTC AATATATTAA AA........ .......... .......... .......... 82 TTGTGCTTGT TAAAGCAGCA GTTGAATTTG GTGTTCTCAA GCAGTATTTA TTTCACTTGC 87850 .......... .......... .......... .......... .......... .......... 82 ATAGAACACT TCCCTTCCTG GTGTAGTGTT CCAATGATAT CTTTTTCCTA TTCAAAATGG 87790 .......... .......... .......... .......... .......... .......... 82 TACTGTGAAT TAAACTGAAG TTACATACGG GACAATTGAG AACTTCCTTT GCCTCTTGCT 87730 .......... .......... .......... .......... .......... .......... 82 ACCTTCTTCT AAGAAGGATG TCTCATAAGT TCTGTAATCT TCTAAAGGCA AGAAGTCACA 87670 .......... .......... .......... .......... .......... .......... 82 CTGAGACTCC CAGAGTAGCT GTTAGTATTA TTAATAAGAG AAACTCTGTT ATAGCCATTT 87610 .......... .......... .......... .......... .......... .......... 82 GTGTACGTCA TATGTACTAT ACAGATTAAG GAATACATAG AGTTGCTTGC AATTTCAGTT 87550 .......... .......... .......... .......... .......... .......... 82 CTTGACTGTT GCCAGCAAGT ATAGAAAAAG TGTATATTCT AGGTAGTGTC TTCTTTCAAA 87490 .......... .......... .......... .......... .......... .......... 82 TAATAGATTC TTTTTAGGTG TGATATCTTC TGAAAAATTC ACGTTCACCT TGAGTTTTTG 87430 .......... .......... .......... .......... .......... .......... 82 TAGAGAACTC TTGTCATGTT CGTCAGTTTA ATATTTAGCA GCCCTTAGAA AATATAGAAT 87370 .......... .......... .......... .......... .......... .......... 82 CTGAATTGTT TTGGTATACT GTTTCCAAGA AGTACCTTAG TATGCCTAAT TTATGTCGAA 87310 .......... .......... .......... .......... .......... .......... 82 GGTGCGGCTC AGGTAAACCT TCAATCTTGC AACCTCATCA ACGTCATCAC CAGTGACCAC 87250 .......... .......... .......... .......... .......... .......... 82 GATATTCTGA ACATTTACTG ATCTTCTTGA AGGCCATTTC ATTATTTGGT TTTGACAAAA 87190 .......... .......... .......... .......... .......... .......... 82 GATTCAATAG CGTATTTATG CACCTCTGTT AAACTTTCCT TTTTGTAATG ATGTCATCAT 87130 .......... .......... .......... .......... .......... .......... 82 CTGTTTGAGT CAGCTTAAAG TCTTCTTACT TGTCAGGAAT ATCATGTATC CAATCAATTC 87070 .......... .......... .......... .......... .......... .......... 82 TTTTGAAAAA TTGTTCACAA TCCTCTGATA TGTTTGACAG ATATTCTTAG TTAGGTCATT 87010 .......... .......... .......... .......... .......... .......... 82 CAAGTTTCAA CTAGGACAAG GATTTCTGTA ACTATGTAGA TTCGTAATAA GTTATCTTTT 86950 .......... .......... .......... .......... .......... .......... 82 CTCTGAGCTA ATGATCCTTG TCTCTCGTTC TCTTATTTAT TATAGTTCCA TAATTGTTAT 86890 .......... .......... .......... .......... .......... .......... 82 TTTTAGTAAC CAAAAGCCTG CATTGACGAA CCTCATCTCT AATTTTGGCC CACAATGTGG 86830 .......... .......... .......... .......... .......... .......... 82 TGTATTAGCT TTGGTCATTG GGCCCTAGGC CTTTGATCTA GTGGTAAGAG CGTAAAGCAT 86770 .......... .......... .......... .......... .......... .......... 82 GATGTGCGTG TTAGTCACAG TTCATATTTC GAACTTGGAC CCTGACAAAG CCGCGTTCAT 86710 .......... .......... .......... .......... .......... .......... 82 TATCCAGAGT TTTGAACCAT GCGCTATATT GTCCCTTGGG AATTTCTTAG TTATAAAAGA 86650 .......... .......... .......... .......... .......... .......... 82 TATATGGCTG ATCATTGAAA TTTAATATTC TAGACAATTT TTTTCTTGTA GGCTGGTTTA 86590 .......... .......... .......... .......... .......... .......... 82 ATTGTGTTTG ACCTTTTGCT TTCATTTCCT AATTATTTTA ATTCCTTGAT TTCCAATACT 86530 .......... .......... .......... .......... .......... .......... 82 AAATAATTTT TCTTGTATTT TCATAATAGA AGTTTTCTGA ATTTCACACT TCCCCGAAAC 86470 .......... .......... .......... .......... .......... .......... 82 CAAGGTAAAT TTTTTTAACC AGATCTTAAA GAGTCCTGAC CACACTGAAT TTATCCATTG 86410 .......... .......... .......... .......... .......... .......... 82 GTGATGTAAC TCAGCTAGTT GATATTTGCC TATATGGATC TTTTGCTTCT ATTATGCTTG 86350 .......... .......... .......... .......... .......... .......... 82 GATTTTAGAT ATCTTTTGCA AGAGATATTC AGCGACTATT TGAGAAACAA CAATTATGTT 86290 .......... .......... .......... .......... .......... .......... 82 TCTTTCACTT TCTAGGACTT GTTCGTTGCT GACGGAGAAG GGCTTCCCCG ATCACTAGTT 86230 ||||| |||||||||| |||||||||| |||||||||| |||||||||| .......... .....GACTT GTTCGTTGCT GACGGAGAAG GGCTTCCCCG ATCACTAGTT 127 GAAGAAGAAG CGAGATTCGC TCATCAAATC CTCAGTTTAT TTTCCCTCCG GGTTTGTTAA 86170 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | GAAGAAGAAG CGAGATTCGC TCATCAAATC CTCAGTTTAT TTTCCCTCCG G......... 178 GAATTAATTA AAGCTTTTAG CCTGTTTCTG TATGCATGCT GTGGGACCTA TTTAATATTT 86110 .......... .......... .......... .......... .......... .......... 178 TGGTTTTCGT AGCAGGCTGA ATCTGTGATC CAATTGTTGA TGACTTCTAG TGAACACAGT 86050 ||||| |||||||||| |||||||||| |||||||||| |||||||||| .......... .....GCTGA ATCTGTGATC CAATTGTTGA TGACTTCTAG TGAACACAGT 223 TCAGGACTTG AAGCACATAA ATATGGCCAC AGACATCTGG GAGATGCACA CACCTTGATA 85990 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAGGACTTG AAGCACATAA ATATGGCCAC AGACATCTGG GAGATGCACA CACCTTGATA 283 CGCGTTTTAT GTCACAAGAA GGAGAGAGAA GCTTCAAAAT TCTTGAAGCG CTATTACCAC 85930 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCGTTTTAT GTCACAAGAA GGAGAGAGAA GCTTCAAAAT TCTTGAAGCG CTATTACCAC 343 CTCCCACCAT CGTCAGGTGC CCTTTCGAAT CCTTTTAGTT TGTTATGGTT TCCCAAAAGG 85870 |||||||||| |||||| CTCCCACCAT CGTCAG.... .......... .......... .......... .......... 359 CTGATATGAT AAAGTATATA TTTCACCTCC TGAAATCCAA TTTTTTTTTT TGGAGCGCAG 85810 .......... .......... .......... .......... .......... .......... 359 TGTACAGTGG GGCTGCAGTG GAGGATTCCT CTATGAAGTC GCCACTTATG GCAGATCTCA 85750 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTACAGTGG GGCTGCAGTG GAGGATTCCT CTATGAAGTC GCCACTTATG GCAGATCTCA 419 TTAAAAGGAG TGCTTCGTTT CGTTGGTCTG ACAAAAGCAG TAGCAGTTTC AGATCTTTAA 85690 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAAAAGGAG TGCTTCGTTT CGTTGGTCTG ACAAAAGCAG TAGCAGTTTC AGATCTTTAA 479 AGAAGAAAAT CCAAGACGCA ACATCAGATT TTAGGCAAGT GGGATGGTGA TGATGGACGC 85630 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAGAAAAT CCAAGACGCA ACATCAGATT TTAGGCAAGT GGGATGGTGA TGATGGACGC 539 CTTCCTAACA GCATATCG 85612 |||||||||| |||||||| CTTCCTAACA GCATATCG 557 hqPGS_C08HBa0235H18.1-_SGN-E307203+ (88029 87948,86274 86179,86094 85914,85809 85612) ******************************************************************************** EST sequence 355 -strand 209 n (File: SGN-E549052-) 1 AATTTTGTCA TGTTTGCTTC TAACTTTGAA GATGTAGATC AATGTTGTAA ACTCTGGGTC 61 TCAACTATAA AAGTAAAAGT AACATTCCCA GATTATAGTA TATCTACATC TCATACCTAG 121 TTAGCAAATC AACATTGTGA CATATCATGT ATGCCTGTCC TTACTTTGCA TCCACCATTA 181 TTGAAATTTT ATGTCATTAA AAAAAAAAA Predicted gene structure (within gDNA segment 86126 to 84619): Exon 1 85516 85309 ( 208 n); cDNA 1 209 ( 209 n); score: 0.964 MATCH C08HBa0235H18.1- SGN-E549052- 0.964 208 0.995 C PGS_C08HBa0235H18.1-_SGN-E549052- (85516 85309) Alignment (genomic DNA sequence = upper lines): AATTTTGTCA TGTTTGCTTC TAACTTTGAA GATGTAGATC AATGTTGTAA ACTCTGGGTC 85457 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTTTGTCA TGTTTGCTTC TAACTTTGAA GATGTAGATC AATGTTGTAA ACTCTGGGTC 60 TCAACTATAA AAGTAAAAGT AACATTCCCA GATTATAGTA TATCTACATC TCATACCTAG 85397 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAACTATAA AAGTAAAAGT AACATTCCCA GATTATAGTA TATCTACATC TCATACCTAG 120 TTAGCAAATC AACATTGTGA CATATCATGT ATGCCTGTCC TTACTTTGCA TCCA-CATTA 85338 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| TTAGCAAATC AACATTGTGA CATATCATGT ATGCCTGTCC TTACTTTGCA TCCACCATTA 180 TTGAAATTTT ATGTCATTAT ATATGAGAA 85309 |||||||||| ||||||||| | | | || TTGAAATTTT ATGTCATTAA AAAAAAAAA 209 hqPGS_C08HBa0235H18.1-_SGN-E549052- (85516 85309) ******************************************************************************** EST sequence 463 +strand 689 n (File: SGN-E212014+) 1 GTACTTGGGA TCGTAAGATC CACAATTCGA AATAGCTACA TAATTGTTAT GGGAAAAAAT 61 TCACAATCCA TTTAGGAACT TAGTGAATCA GGGACTTTGA TCATAGCTTC TACTTTTGTG 121 CTTGAGATAT GCTGCCAATA TTCATATTTA GATTTCGGAC TTCTATCCCT TAGTGCCAAA 181 AACACCGATT ATTTTTTTAT TATCAAGCAC ATAACCCGTT GATTATTAAA CATTTTCTTC 241 AAATAAAAAT GTTACATTCC AATTGAACGA AGGCCTCCAA ATATTTTGTT GCCTTTTTAT 301 AAATCATCAA AATTAGAGGT TAAACTAAAT TGTGTACAAT TGTTATCAAA GGTGCGCTTG 361 ACCCTTGGAA GAGAGCTCAA AACGTGTTGA GCGCTTCGGC CTCACTTAAT GTGTTCTTTA 421 TTGGTATCAT CATGGTTCGA AGGCATACTT CCCTTGCCAA TGGATCTCTT CTGAAGAGTC 481 AATACTAAAC AATTGATATT TCTGTTTGTC TCAGTTATCA ATTTCTTTGT TCATATATTT 541 GTCATTCGTG CTTACAAATT ATTAGTCTTG GACTAAACAT ATATATTTAT ATTTTTTCTC 601 CCTTTGTGCC TTTTTTTAAT TAAAGCCCAC ACTTTATTTG CGCTCAGAGC CCAACAGACC 661 TTAGAGCTTT TTTGCGCTTT TTGCTTTGA Predicted gene structure (within gDNA segment 102097 to 94728): Exon 1 99750 99721 ( 30 n); cDNA 243 272 ( 30 n); score: 0.667 Intron 1 99720 98740 ( 981 n); Pd: 0.826 (s: 0), Pa: 0.000 (s: 0) Exon 2 98739 98704 ( 36 n); cDNA 273 308 ( 36 n); score: 0.667 Intron 2 98703 97955 ( 749 n); Pd: 0.000 (s: 0), Pa: 0.261 (s: 0) Exon 3 97954 97928 ( 27 n); cDNA 309 335 ( 27 n); score: 0.593 Intron 3 97927 96443 (1485 n); Pd: 0.000 (s: 0), Pa: 0.694 (s: 0.66) Exon 4 96442 96077 ( 366 n); cDNA 336 689 ( 354 n); score: 0.745 MATCH C08HBa0235H18.1- SGN-E212014+ 0.745 459 0.666 C PGS_C08HBa0235H18.1-_SGN-E212014+ (99750 99721,98739 98704,97954 97928,96442 96077) Alignment (genomic DNA sequence = upper lines): ATCAAAATGT CTCCCTCCAA ATGCAAAGAG GTGCTATATT CCATTAGAAA TATTGCTTCG 99691 || ||||||| | ||||| || | || ATAAAAATGT TACATTCCAA TTGAACGAAG .......... .......... .......... 272 ACATTATCAT CTATGCCTGG AAATTGTGGC ATACAAGGCG AGACATATTA CTGGAGTGCT 99631 .......... .......... .......... .......... .......... .......... 272 GGTTATCCGT TTAACATGAG GCTGTATGAG AAGCTACTCC TTGGTTTATT TGACATTCTG 99571 .......... .......... .......... .......... .......... .......... 272 GAAGATGGCA AGCTCATAGA GGTTTACGTT ATATCTTTTA ACCTTTTGTG TTGGTTATTC 99511 .......... .......... .......... .......... .......... .......... 272 TGAATGTAGT GTACTTAATG TTCTCGTCAT CAGGAAGCTG ATGAAATCCT AAAGCTCATC 99451 .......... .......... .......... .......... .......... .......... 272 AAATCAACAT GGCCTTTGTT GGGAATTACC CAGAAGTTAC ATGATGTATT ATATGGATGG 99391 .......... .......... .......... .......... .......... .......... 272 GTGCTTTTTC AGCAGGTAAT TGAGCTTAAC CATGTTATTG AAGCAACCTT CTACCATCTC 99331 .......... .......... .......... .......... .......... .......... 272 CGTCCTCTCT CTCTCTCCCA GTTTTTGATG CTTTTATTAG ACACAGAATA TACGTATGCG 99271 .......... .......... .......... .......... .......... .......... 272 TGGCTAGGAA ATGAAGCTAT TATTTTCCGT CGCACAACTC ATGGGCCCAG ACATACTGAT 99211 .......... .......... .......... .......... .......... .......... 272 TTCTATCAAT GCATAACTTT AGCTTAGATT CTTCAATTGC TTCTACTGTT TGCACAAAAT 99151 .......... .......... .......... .......... .......... .......... 272 AGAACACCTA GAGTTGCACC CATGTTGCCA CTCACTTTGA AGTCTGCTTG TTATGTTAAA 99091 .......... .......... .......... .......... .......... .......... 272 AAGTTTACTG TGAAAGATGG AGAGTTATAT GCTTTACTGC AATGTGATGT AAGCTGGCTA 99031 .......... .......... .......... .......... .......... .......... 272 CTTGTGTGTT TAATCTTCCT TTAATAACTT TTTTGTTTCC TGTTCCCCTG TTTGTGATGC 98971 .......... .......... .......... .......... .......... .......... 272 AGTAGCATTC AGTTCTCAAA TTATTACATG TGTATGCTTT TGTTATGGCT TGTACCTTGC 98911 .......... .......... .......... .......... .......... .......... 272 TGCTTGGGTG CCTCACCTCC CATATGATTT TTTTCTTGGA GTATATGGAT TGTGAGGAAC 98851 .......... .......... .......... .......... .......... .......... 272 AACAGATTGG TGAATCTTTA TAGCTGGGTC GACCTATCAC ACATAAGGCC TTTCATGATA 98791 .......... .......... .......... .......... .......... .......... 272 GACTAAAGAT GTCGCCAGAT TTGCAGTTGA GTTTTTTACT TATTCTGGCA CGGTTGCACC 98731 | | || .......... .......... .......... .......... .......... .GCCTCCAAA 281 TGTTTTGTCC CTGTTTTATA AAACAGCTGA CTTTTTAAAA AATTTCTTTA ACGACAATTA 98671 | |||||| | ||||||| || || | TATTTTGTTG CCTTTTTATA AATCATC... .......... .......... .......... 308 CAAATTATTA ACCAGTTGCC GTTGTTGAAT ATTGAGAGGA AGTGTTTCTA GGGGAGTTAA 98611 .......... .......... .......... .......... .......... .......... 308 ATATTTTAAA AAAGAAAAGA AGAAGAAGAG AGATAGAGGT AGGTCTGAAA GAAGCTCTCC 98551 .......... .......... .......... .......... .......... .......... 308 TTCAAGCGTC TACCTTTTCT TTGAGGAACT GGTCCGACCA TTAAAACTTA TATTTGTCCA 98491 .......... .......... .......... .......... .......... .......... 308 CATTAATGAG GAGACAGAAC ACCTATCATA AACCTGCTGG AGCTGAGCTT GTCTTAAAGC 98431 .......... .......... .......... .......... .......... .......... 308 CGCGAATCAA CCAAGTCAAT GATAGGGAGC CTACTCTGGC TATATGATAC ATGCTTTTTC 98371 .......... .......... .......... .......... .......... .......... 308 ATTTAAAATT TATTGTTGCT AATTTTCTTG CACTTTTAGT TTTGTCTTCT CAAAACACCT 98311 .......... .......... .......... .......... .......... .......... 308 GAATATTAGC CTTCTTAATT TTGCACAGTT AAATCTAGCA TTGCTCCTCA CTTTGTGATA 98251 .......... .......... .......... .......... .......... .......... 308 ATTCAGTTGC TTGCAGTTTG CTAACAAGGA GTTACAATTT CTGTGCTTTG GTAGACATTT 98191 .......... .......... .......... .......... .......... .......... 308 TGATGCATTT AGCATTTAAA TAGTGCGAAA TTAGTTTCCT TGTAAAGTCA TTGCTATTAT 98131 .......... .......... .......... .......... .......... .......... 308 TTGTAGACTT GATAAAATTT CTGATGTATT TTCTTCTTAT TGAAGTTTCT TGGGACAGAG 98071 .......... .......... .......... .......... .......... .......... 308 GAGGCAATGC TTTTGGAGTA TGCAGTTCGT AAAATGCGGA ATATTCCGTC ATCTGAAGAT 98011 .......... .......... .......... .......... .......... .......... 308 GTCGTACAGA ATGAAAAGAA GTATTTGGAG AGTCTAGTTT GTGTAAATCA CTGCAGTGGC 97951 .......... .......... .......... .......... .......... ......AAAA 312 TCTGAGATTA GGCTAAATTT GGTGCAGTCT ATCCTTTGGT CAATTGGTTT ATGGTGCGAC 97891 | ||| ||| ||||||| || TTAGAGGTTA AACTAAATTG TGT....... .......... .......... .......... 335 AATAAGTTGC ATGATTATCA TTGGCATTTT TTTAAGGTTG TTTTCTGTAC TTGTATATTC 97831 .......... .......... .......... .......... .......... .......... 335 TTCTTATCTT GTTTCTCCGT TGTGATGTAT GACTTGTTAA TGGTTGTCTA ACATGCAAAA 97771 .......... .......... .......... .......... .......... .......... 335 TTGTGTATCT GATGAAAATT TTCTCCCTTT GTTAGAAGCC TTCTCTTTTC AAGGGGGTGT 97711 .......... .......... .......... .......... .......... .......... 335 TATCCATGGC ATTGGCAGCA GGGAATCAGA AGTTCGAAAT GTCTGGAAAC ATGGAGGTAT 97651 .......... .......... .......... .......... .......... .......... 335 TTGGTACAAA TTTATCTCTA TTAAGTGCCT TCTCTGGTGG ATGAAATAAG ACAACCATGG 97591 .......... .......... .......... .......... .......... .......... 335 AAAATATTTT GCTGGGCATC TAAATGCTAA TAGTCACTTG AGCCTGTGTG TATGATTCTC 97531 .......... .......... .......... .......... .......... .......... 335 CAGCACTAGT TCTCAAAGTG TATAACTGAA AAGACATGGC TTGACATCCT TTTAATTGGA 97471 .......... .......... .......... .......... .......... .......... 335 TTCTGTGATG TGTTTATTTG TGTACTTGGA CATTTAAGTT GGACAAGAAT CTAGAAATGC 97411 .......... .......... .......... .......... .......... .......... 335 AATATGTCCA AAACAAGCTA CTTTAGGAGG GGGTATTGTT TTTATATCGA CTTCCAAGGT 97351 .......... .......... .......... .......... .......... .......... 335 CGTATCTTCT CCCTGCACCA TTTTTGTTTT GGAAGTAATT TATAGCAAGT CTTCATTGGA 97291 .......... .......... .......... .......... .......... .......... 335 AAGACATGGC TTGACATCCT TTTAATTGGA ATCTGTAATG TGTTTATTTG TGTACTTGGA 97231 .......... .......... .......... .......... .......... .......... 335 CATTTAAGTT GGACAAGAAT CTAGAATTGC AATATGTCCA AAACAAGCTA CTTTAGGAGG 97171 .......... .......... .......... .......... .......... .......... 335 GGGTATTGTT TTTTATATCG ACTTCCAAGG TCGTATTCTT CTCGCTGCAC CATTTTTGTT 97111 .......... .......... .......... .......... .......... .......... 335 TTGAAAGTAA TTTATAGCAA GTCTTCATTG AAAAATATCT GTGCTTGCTA CCTTGCCAGA 97051 .......... .......... .......... .......... .......... .......... 335 AAAAGCTGTC CTCCTTATCT TCATCAAAAA ACACAACGCT CAATTTTTTT GGGCAAGCAG 96991 .......... .......... .......... .......... .......... .......... 335 CTCATCTTTC CAATCTCCCA ACTATTGGAA CTTCTTCTGA AAAGAAAATT CCATTTCTTC 96931 .......... .......... .......... .......... .......... .......... 335 AGAGAAGCAA CTTGTTATGG TATAAGTATT GTAGATAACT AGATTGTATA AATCTGGGAA 96871 .......... .......... .......... .......... .......... .......... 335 TATGGCCCTT GAGGCAATGT TTTCGAACCA TTTATTCGGT CAAAGTTTAA TCTTTTTTCC 96811 .......... .......... .......... .......... .......... .......... 335 ATTTCCAATC TTTAGGCTTG TACGTGAGTT AAATAGTTAA ATTCATCCCA GCAATTTCTA 96751 .......... .......... .......... .......... .......... .......... 335 ATTTGCCTCT GTATGGCTAT CCTGTAGGGA GCTTTTTCCA GTTTAATGCC CCAGGGAGAT 96691 .......... .......... .......... .......... .......... .......... 335 TCCATCCTAT ATTTTACGTT CACAACTTTT TTCCAAAGTT CTTCCTTTCC ATCACCAGAT 96631 .......... .......... .......... .......... .......... .......... 335 CTCCAAGGCA GTTTGGAACC ATCAAATCAA CTCATACACT ATGTGGAATC GGCAAACTGC 96571 .......... .......... .......... .......... .......... .......... 335 ACCCAGATTT TAGAACCTAC CAGCAATTCT TACCTGTCAG TCTGATTATT TAACAAACAG 96511 .......... .......... .......... .......... .......... .......... 335 AAAATACTAT GGCCCAACTT ATTAATGTCT CCAAGTAGGA TGGGAAAATA TTAACAAAAT 96451 .......... .......... .......... .......... .......... .......... 335 TGACTTAGAT TAGTGTTGTC AAAGGCACAC TTAAGCCCTA AAGCAGGGAT CAAAATGTGT 96391 | | |||| || ||||| | | || | || | | || | | ||||| |||| ........AC AATTGTTATC AAAGGTGCGC TTGACCCTTG GAAGAGAGCT CAAAACGTGT 387 TGAGTGTTTC -GCCTAACTA AATGTGCGCT TCGATGTCGT CATCAAGGTT CTAAGGCATA 96332 |||| | ||| |||| ||| |||||| || | || | ||||| |||| | |||||||| TGAGCGCTTC GGCCTCACTT AATGTGTTCT TTATTGGTAT CATCATGGTT CGAAGGCATA 447 CTTTTCCTTT CTAATGAACC TTTTATGGAA CGGCAACATC CAACAATTGG TATTTCGCTT 96272 | || |||| | |||| | | | || || | | ||| | |||||||| |||||| || C-TTCCCTTG CCAATGGATC TCTTCTGAAG AGTCAATACT AAACAATTGA TATTTCTGTT 506 TATCATATTT TTTTTTCTAT TCTTTTTGTT CATATATTTG TCATTCTTGC TTA-TAATAT 96213 | || | || | | || | | |||||| |||||||||| |||||| ||| ||| ||| TGTCTCAGTT AT----CAAT T-TCTTTGTT CATATATTTG TCATTCGTGC TTACAAATTA 561 TTAGTCTTGG ACTAAACATA TTTATTTGTA TTTTTTCTCC CTTTGCGCC- TTTTTAAAAT 96154 |||||||||| |||||||||| | ||||| || |||||||||| ||||| ||| ||||| || | TTAGTCTTGG ACTAAACATA TATATTTATA TTTTTTCTCC CTTTGTGCCT TTTTTTAATT 621 AAAGCCCACA TTTTATTAGC ACTTTGCGCT TAAAGCTCCA TCAAACCTTA GAGCTTTATT 96094 |||||||||| | || | |||||||| | ||| ||| || |||||| ||||||| || AAAGCCCACA --CT-TT--- A-TTTGCGCT CAGAGC-CCA ACAGACCTTA GAGCTTTTTT 673 GCGCTTTTTG CTTTTGA 96077 |||||||||| | ||||| GCGCTTTTTG C-TTTGA 689 hqPGS_C08HBa0235H18.1-_SGN-E212014+ (96442 96077) ******************************************************************************** EST sequence 468 -strand 505 n (File: SGN-E228234-) 1 CATATATTAT AGATACAAGA GACATGTCTT CCTAACTTTA TACGACTGAT AGAAGTACCA 61 AACGGACTTG ATAGTGAAAA TCATAAATTG ATGAAAGGAG CCACCTCCCT ACTGAGGCAC 121 CACAATGTAA AACAAGCACA AGTCATACTA GGGCTGTGTA TCGGCCGGTT CGGTTCGATT 181 TTGAAGTTTA TCGGGTTGAC TAATTGGTTA TCCGTTTGTA GTGATGCTAA ACCATTATAG 241 AACCATTAAG ATATTGGCTT ATCGGTTATT GGTTTATCGA TTTTTGATCG TTATCTGTTC 301 GGTTATCGGT TTAACCGTTA AGATTTGACC CAAAAGAAAA AATATTGAAA ATCACGTAGA 361 AACAAGGTGA CAAACCAAAT AAACCATGCA CTTGAGTTCA CAAGTTACAT CTTGCTCAAA 421 AGCAAGCACT TTTACATCGT AGAATAATCA AGTGTTTGAG ACAACCAAAA ATAAAAGTAG 481 GAAATTAAAC TCCAAGTCGA GGAAT Predicted gene structure (within gDNA segment 101475 to 107758): Exon 1 106092 106395 ( 304 n); cDNA 149 462 ( 314 n); score: 0.747 MATCH C08HBa0235H18.1+ SGN-E228234- 0.747 304 0.602 C PGS_C08HBa0235H18.1+_SGN-E228234- (106092 106395) Alignment (genomic DNA sequence = upper lines): TAAGTGTCTG TTATGATCGA TTTGGTTCGA TTTTAAAGTT TATCAGTTTG GCTTATTGGT 106151 || | | || | | || || ||||||| |||| ||||| |||| | ||| || |||||| TAGGGCTGTG TATCGGCCGG TTCGGTTCGA TTTTGAAGTT TATCGGGTTG ACTAATTGGT 208 TATCGATTTG TAGTGATGTT AAATCGTTAT ATAACCATTG AGATATTGAC TTATTAATTA 106211 |||| |||| |||||||| | ||| | |||| | ||||||| |||||||| | |||| ||| TATCCGTTTG TAGTGATGCT AAACCATTAT AGAACCATTA AGATATTGGC TTATCGGTTA 268 TTGG-TTAT- -TTATTTG-T CGATTTTTTA TC-GTTATCG ATTTAACCGC TAAGATTT-A 106265 |||| |||| | |||| | || | | | || ||||||| |||||||| |||||||| | TTGGTTTATC GATTTTTGAT CGTTATCTGT TCGGTTATCG GTTTAACCGT TAAGATTTGA 328 ATCAAAA-AT AAAATA---A AAATCACTTA GATACAAGGT GACAAACCAA ATGAACCATG 106321 ||||| | |||||| | ||||||| || || ||||||| |||||||||| || ||||||| CCCAAAAGAA AAAATATTGA AAATCACGTA GAAACAAGGT GACAAACCAA ATAAACCATG 388 CAAACGAGTT CACAAGTTAC ATCTTGCTCA AAAGCAAACA TTTTTACAGT GTAGAATTAC 106381 || ||||| |||||||||| |||||||||| ||||||| || ||||||| ||||||| | CACTTGAGTT CACAAGTTAC ATCTTGCTCA AAAGCAAGCA CTTTTACATC GTAGAATAAT 448 CAAGTGCTTG AGAC 106395 |||||| ||| |||| CAAGTGTTTG AGAC 462 hqPGS_C08HBa0235H18.1+_SGN-E228234- (106092 106395) ******************************************************************************** EST sequence 1112 -strand 504 n (File: SGN-E240450-) 1 ATATATTATA GATCCAAGAG ACATGTCTTC CTAACTTTAT ACGACTGATA GAAGTACCAA 61 ACGGACTTGA TAGTGANAAT CATAAATTGA TGAAAGGAGC CACCTCCCTA CTGAGGCACC 121 ACAATGTAAA ACAAGCACAA GTCATACTAG GGCTGTGTAT CGGCCGGTTC GGTTCGATTT 181 TGAAGTTTAT CGGGTTGACT AATTGGTTAT CCGTTTGTAG TGATGCTAAA CCATTATAGA 241 ACCATTAAGA TATTGGCTTA TCGGTTATTG GTTTATCGAT TTTTGATCGT TATCTGTTCG 301 GTTATCGGTT TAACCGTTAA GATTTGACCC AAAAGAAAAA ATATTGAAAA TCACGTAGAA 361 ACAAGGTGAC AAACCAAATA AACCATGCAC TTGAGTTCAC AAGTTACATC TTGCTCAAAA 421 GCAAGCACTT TTACATCGTA GAATAATCAA GTGTTTGAGA CAACCAAAAA TAAAAGTAGG 481 AAATTAAACT CCAAGAAGAG GAAT Predicted gene structure (within gDNA segment 101485 to 107758): Exon 1 106092 106395 ( 304 n); cDNA 148 461 ( 314 n); score: 0.747 MATCH C08HBa0235H18.1+ SGN-E240450- 0.747 304 0.603 C PGS_C08HBa0235H18.1+_SGN-E240450- (106092 106395) Alignment (genomic DNA sequence = upper lines): TAAGTGTCTG TTATGATCGA TTTGGTTCGA TTTTAAAGTT TATCAGTTTG GCTTATTGGT 106151 || | | || | | || || ||||||| |||| ||||| |||| | ||| || |||||| TAGGGCTGTG TATCGGCCGG TTCGGTTCGA TTTTGAAGTT TATCGGGTTG ACTAATTGGT 207 TATCGATTTG TAGTGATGTT AAATCGTTAT ATAACCATTG AGATATTGAC TTATTAATTA 106211 |||| |||| |||||||| | ||| | |||| | ||||||| |||||||| | |||| ||| TATCCGTTTG TAGTGATGCT AAACCATTAT AGAACCATTA AGATATTGGC TTATCGGTTA 267 TTGG-TTAT- -TTATTTG-T CGATTTTTTA TC-GTTATCG ATTTAACCGC TAAGATTT-A 106265 |||| |||| | |||| | || | | | || ||||||| |||||||| |||||||| | TTGGTTTATC GATTTTTGAT CGTTATCTGT TCGGTTATCG GTTTAACCGT TAAGATTTGA 327 ATCAAAA-AT AAAATA---A AAATCACTTA GATACAAGGT GACAAACCAA ATGAACCATG 106321 ||||| | |||||| | ||||||| || || ||||||| |||||||||| || ||||||| CCCAAAAGAA AAAATATTGA AAATCACGTA GAAACAAGGT GACAAACCAA ATAAACCATG 387 CAAACGAGTT CACAAGTTAC ATCTTGCTCA AAAGCAAACA TTTTTACAGT GTAGAATTAC 106381 || ||||| |||||||||| |||||||||| ||||||| || ||||||| ||||||| | CACTTGAGTT CACAAGTTAC ATCTTGCTCA AAAGCAAGCA CTTTTACATC GTAGAATAAT 447 CAAGTGCTTG AGAC 106395 |||||| ||| |||| CAAGTGTTTG AGAC 461 hqPGS_C08HBa0235H18.1+_SGN-E240450- (106092 106395) ******************************************************************************** EST sequence 1214 -strand 440 n (File: SGN-E241852-) 1 ACTTGATAGT GAAAATCATA AATTGATGAA AGGAGCCACC TCCCTACTGA GGCACCACAA 61 TGTAAAACAA GCACAAGTCA TACTAGGGCT GTGTATCGGC CGGTTCGGTT CGATTTTGAA 121 GTTTATCGGG TTGACTAATT GGTTATCCGT TTGTAGTGAT GCTAAACCAT TATAGAACCA 181 TTAAGATATT GGCTTATCGG TTATTGGTTT ATCGATTTTT GATCGTTATC TGTTCGGTTA 241 TCGGTTTAAC CGTTAAGATT TGACCCAAAA GAAAAAATAT TGAAAATCAC GTAGAAACAA 301 GGTGACAAAC CAAATAAACC ATGCACTTGA GTTCACAAGT TACATCTTGC TCAAAAGCAA 361 GCACTTTTAC ATCGTAGAAT AATCAAGTGT TTGAGACAAC CAAAAATAAA AGTAGGAAAT 421 TAAACTCCAA GTCGAGGAAT Predicted gene structure (within gDNA segment 102125 to 107758): Exon 1 106092 106395 ( 304 n); cDNA 84 397 ( 314 n); score: 0.747 MATCH C08HBa0235H18.1+ SGN-E241852- 0.747 304 0.691 C PGS_C08HBa0235H18.1+_SGN-E241852- (106092 106395) Alignment (genomic DNA sequence = upper lines): TAAGTGTCTG TTATGATCGA TTTGGTTCGA TTTTAAAGTT TATCAGTTTG GCTTATTGGT 106151 || | | || | | || || ||||||| |||| ||||| |||| | ||| || |||||| TAGGGCTGTG TATCGGCCGG TTCGGTTCGA TTTTGAAGTT TATCGGGTTG ACTAATTGGT 143 TATCGATTTG TAGTGATGTT AAATCGTTAT ATAACCATTG AGATATTGAC TTATTAATTA 106211 |||| |||| |||||||| | ||| | |||| | ||||||| |||||||| | |||| ||| TATCCGTTTG TAGTGATGCT AAACCATTAT AGAACCATTA AGATATTGGC TTATCGGTTA 203 TTGG-TTAT- -TTATTTG-T CGATTTTTTA TC-GTTATCG ATTTAACCGC TAAGATTT-A 106265 |||| |||| | |||| | || | | | || ||||||| |||||||| |||||||| | TTGGTTTATC GATTTTTGAT CGTTATCTGT TCGGTTATCG GTTTAACCGT TAAGATTTGA 263 ATCAAAA-AT AAAATA---A AAATCACTTA GATACAAGGT GACAAACCAA ATGAACCATG 106321 ||||| | |||||| | ||||||| || || ||||||| |||||||||| || ||||||| CCCAAAAGAA AAAATATTGA AAATCACGTA GAAACAAGGT GACAAACCAA ATAAACCATG 323 CAAACGAGTT CACAAGTTAC ATCTTGCTCA AAAGCAAACA TTTTTACAGT GTAGAATTAC 106381 || ||||| |||||||||| |||||||||| ||||||| || ||||||| ||||||| | CACTTGAGTT CACAAGTTAC ATCTTGCTCA AAAGCAAGCA CTTTTACATC GTAGAATAAT 383 CAAGTGCTTG AGAC 106395 |||||| ||| |||| CAAGTGTTTG AGAC 397 hqPGS_C08HBa0235H18.1+_SGN-E241852- (106092 106395) ******************************************************************************** EST sequence 444 +strand 502 n (File: SGN-E313722+) 1 GTCTTCTTCG ACATCATCTG GACCAGAAAT CCCTTGGGTT GAGAAGTTTC GACCCACCAA 61 AGTATCCGAC ATCGTCGGCA ATGAAGATGC AGTTGCCAGG CTTCAAGTTA TTGCTCGTGA 121 TGGAAACATG CCCAATCTTA TTTTAGCCGG TCCTCCGGGT ACTGGCAAAA CCACTAGTAT 181 ATTGGCTCTT GCTCATGAGC TTTTGGGACC AAACTATAAG GAGGCTGTGT TGGAGCTAAA 241 TGCATCAGAT GATAGGGGCA TCGATGTTGT TAGAAACAAA ATCAAGATGT TTGCTCAGAA 301 GAAAGTTACT CTACCCCCTG GTCGGCACAA AATAATTATT TTGGACGAGG CTGACAGCAT 361 GACATCTGGA GCTCAGCAAG CACTGAGGAG GACAATGGAA ATATATTCGA ACTCCACTCG 421 CTTTGCTCTT GCCTGCAATA CTTCTTCGAA GATTATCGAG CCTATTCAAA GTAGATGTGC 481 CCTGGTTCGA TTCGCAAGAT TA Predicted gene structure (within gDNA segment 106688 to 108061): Exon 1 107288 107435 ( 148 n); cDNA 1 148 ( 148 n); score: 1.000 MATCH C08HBa0235H18.1+ SGN-E313722+ 1.000 148 0.295 C PGS_C08HBa0235H18.1+_SGN-E313722+ (107288 107435) Alignment (genomic DNA sequence = upper lines): GTCTTCTTCG ACATCATCTG GACCAGAAAT CCCTTGGGTT GAGAAGTTTC GACCCACCAA 107347 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCTTCTTCG ACATCATCTG GACCAGAAAT CCCTTGGGTT GAGAAGTTTC GACCCACCAA 60 AGTATCCGAC ATCGTCGGCA ATGAAGATGC AGTTGCCAGG CTTCAAGTTA TTGCTCGTGA 107407 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTATCCGAC ATCGTCGGCA ATGAAGATGC AGTTGCCAGG CTTCAAGTTA TTGCTCGTGA 120 TGGAAACATG CCCAATCTTA TTTTAGCC 107435 |||||||||| |||||||||| |||||||| TGGAAACATG CCCAATCTTA TTTTAGCC 148 hqPGS_C08HBa0235H18.1+_SGN-E313722+ (107288 107435) Total number of EST alignments reported: 1231 ________________________________________________________________________________ Predicted gene locations (25) in segment 1 to 108061: PGL 1 (- strand): 3114 375 AGS-1 (3114 2967,2474 2409,2290 2164,1008 894,725 375) SCR (e 1.000 d 0.999 a 0.999,e 1.000 d 0.991 a 0.989,e 1.000 d 0.998 a 0.997,e 1.000 d 0.999 a 1.000,e 1.000) Exon 1 3114 2967 ( 148 n); score: 1.000 Intron 1 2966 2475 ( 492 n); Pd: 0.999 Pa: 0.999 Exon 2 2474 2409 ( 66 n); score: 1.000 Intron 2 2408 2291 ( 118 n); Pd: 0.991 Pa: 0.989 Exon 3 2290 2164 ( 127 n); score: 1.000 Intron 3 2163 1009 (1155 n); Pd: 0.998 Pa: 0.997 Exon 4 1008 894 ( 115 n); score: 1.000 Intron 4 893 726 ( 168 n); Pd: 0.999 Pa: 1.000 Exon 5 725 375 ( 351 n); score: 1.000 PGS (2280 2164,1008 894,725 375) SGN-E357091+ PGS (948 894,725 389) SGN-E243226+ PGS (2280 2164,1008 894,725 400) SGN-E309390+ PGS (3114 2967,2474 2409,2290 2164,1008 894,725 495) SGN-E372833+ PGS (3106 2967,2474 2409,2290 2164,1008 894,725 620) SGN-E308050+ PGS (3114 2967,2474 2409,2290 2164,1008 894,725 641) SGN-E336643+ PGS (3022 2967,2474 2409,2290 2164,1008 894,725 653) SGN-E281980+ PGS (3114 2967,2474 2409,2290 2164,1008 894,725 720) SGN-E291193+ PGS (3114 2967,2474 2409,2290 2164,1008 900) SGN-E292732+ PGS (3114 2967,2474 2409,2290 2164,1008 960) SGN-E289946+ PGS (3114 2967,2474 2427) SGN-E294394+ 3-phase translation of AGS-1 (-strand): . . . . . . 3114 AAAAGAAAACGATCTCTGTCCGAAAATTCGTGCGAGAATCTGTTTTTTTTTCCTGGGAAT K R K R S L S E N S C E N L F F F P G N K E N D L C P K I R A R I C F F F L G I K K T I S V R K F V R E S V F F S W E . . . . . . 3054 CTGCTAAGAGTTTGATTGAAAATGGTACGAGGAAAACTTGTAGTTCAACTTGTTGGAGCT L L R V - L K M V R G K L V V Q L V G A C - E F D - K W Y E E N L - F N L L E L S A K S L I E N G T R K T C S S T C W S . . . : . . . 2994 AAAGGCCTTGAAAACACTGATTTTCTCA : ATGATATGGATCCATATGTGATCTTAACTTAT K G L E N T D F L : N D M D P Y V I L T Y K A L K T L I F S : M I W I H M - S - L I - R P - K H - F S Q : - Y G S I C D L N L . . . . : . . 2442 AGATCTCAGGAGAAAAAGAGTACTGTTGCATCAG : GGAAGGGATGTGAACCAGAATGGAAT R S Q E K K S T V A S : G K G C E P E W N D L R R K R V L L H Q : G R D V N Q N G M - I S G E K E Y C C I R : E G M - T R M E . . . . . . 2264 GAAACATTTGTTTTCTCCATTTCTGAGGATGCTGAAGAACTCTTCTTGAAGATAATGGAC E T F V F S I S E D A E E L F L K I M D K H L F S P F L R M L K N S S - R - W T - N I C F L H F - G C - R T L L E D N G . . . . . : . 2204 AGTGATTCTATCGGCGAGGACGATATTGTTGGGGAAGCTAA : GATACCAATTGAACCAGTT S D S I G E D D I V G E A K : I P I E P V V I L S A R T I L L G K L : R Y Q L N Q F Q - F Y R R G R Y C W G S - : D T N - T S . . . . . . 989 TTTTCAGAAGGGAGCATCCCAATAACATGTTATAATGTTGTTAAAGATGAGGAATATTGT F S E G S I P I T C Y N V V K D E E Y C F Q K G A S Q - H V I M L L K M R N I V F F R R E H P N N M L - C C - R - G I L . . . . : . . 929 GGAGAAATTAAAGTTGGTCTCACCTTTACTCCTGAG : GAATATTCTGAGAGGGAGTATGAA G E I K V G L T F T P E : E Y S E R E Y E E K L K L V S P L L L R : N I L R G S M K W R N - S W S H L Y S - : G I F - E G V - . . . . . . 701 GAAGAGAACCTTGGTGGATGGAAAGAGTCTTCTTATTGATGTGAAGCATTACTCGACTGA E E N L G G W K E S S Y - C E A L L D - K R T L V D G K S L L I D V K H Y S T D R R E P W W M E R V F L L M - S I T R L . . . . . . 641 TCAATTTGTTCTTGCTTAAATTATGAACTTATCTTACCCGTTATAACATTTTCAAGTGTT S I C S C L N Y E L I L P V I T F S S V Q F V L A - I M N L S Y P L - H F Q V L I N L F L L K L - T Y L T R Y N I F K C . . . . . . 581 AAAAGTGTGGATTTCATATAGTAAAAAAGAAAAGAGCTATTTTGAGTCTATACGGGTTAC K S V D F I - - K R K E L F - V Y T G Y K V W I S Y S K K E K S Y F E S I R V T - K C G F H I V K K K R A I L S L Y G L . . . . . . 521 TGTAATAAAAATGTTGGGATTTTCTTTTCATTTTTCAAGTTAAATTATTTTATCATATGC C N K N V G I F F S F F K L N Y F I I C V I K M L G F S F H F S S - I I L S Y A L - - K C W D F L F I F Q V K L F Y H M . . . . . . 461 TACAATGTAAGGTTTGTTATTATGCAGAACAACAATGTCAAGTTATGAGATAATCAAGTC Y N V R F V I M Q N N N V K L - D N Q V T M - G L L L C R T T M S S Y E I I K S L Q C K V C Y Y A E Q Q C Q V M R - S S . . . 401 AAATATCTAGAAATTATTGTGAAGAAA K Y L E I I V K K N I - K L L - R Q I S R N Y C E E Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1-_PGL-1_AGS-1_PPS_1 (3039 2967,2474 2409,2290 2164,1008 894,725 663) (frame '1'; 441 bp, 147 residues) 1 LKMVRGKLVV QLVGAKGLEN TDFLNDMDPY VILTYRSQEK KSTVASGKGC EPEWNETFVF 61 SISEDAEELF LKIMDSDSIG EDDIVGEAKI PIEPVFSEGS IPITCYNVVK DEEYCGEIKV 121 GLTFTPEEYS EREYEEENLG GWKESSY- PGL 2 (+ strand): 3611 3724 AGS-1 (3611 3724) SCR (e 0.947) Exon 1 3611 3724 ( 114 n); score: 0.947 PGS (3611 3724) SGN-E323238- 3-phase translation of AGS-1 (+strand): . . . . . . 3611 GCTAATTCAGCAGCTTTTTGTTCAATTTCTCGTGCAGTCAAATTCTCATCAGTACAGGTC A N S A A F C S I S R A V K F S S V Q V L I Q Q L F V Q F L V Q S N S H Q Y R S - F S S F L F N F S C S Q I L I S T G . . . . . . 3671 AAGAGAATGGACCCCTGGCCTCGGATGTCCATATAAAGAACACGACAAACATAA K R M D P W P R M S I - R T R Q T - R E W T P G L G C P Y K E H D K H Q E N G P L A S D V H I K N T T N I Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (-strand): . . . . . . 3724 TTATGTTTGTCGTGTTCTTTATATGGACATCCGAGGCCAGGGGTCCATTCTCTTGACCTG L C L S C S L Y G H P R P G V H S L D L Y V C R V L Y M D I R G Q G S I L L T C M F V V F F I W T S E A R G P F S - P . . . . . . 3664 TACTGATGAGAATTTGACTGCACGAGAAATTGAACAAAAAGCTGCTGAATTAGC Y - - E F D C T R N - T K S C - I S T D E N L T A R E I E Q K A A E L V L M R I - L H E K L N K K L L N - Maximal non-overlapping open reading frames (>= 64 codons): none PGL 3 (- strand): 10524 4639 AGS-1 (8555 8503,5349 4639) SCR (e 0.760 d 0.156 a 0.189,e 0.997) Exon 1 8555 8503 ( 53 n); score: 0.760 Intron 1 8502 5350 (3153 n); Pd: 0.156 Pa: 0.189 Exon 2 5349 4639 ( 711 n); score: 0.997 PGS (5102 4639) SGN-E310129- PGS (5243 4649) SGN-E543853- PGS (5304 4650) SGN-E305774- PGS (5245 4650) SGN-E207039- PGS (5269 4651) SGN-E209843- PGS (5178 4651) SGN-E304108- PGS (5102 4651) SGN-E310823- PGS (5086 4651) SGN-E301999- PGS (5240 4658) SGN-E268610- PGS (5221 4658) SGN-E305497- PGS (5138 4658) SGN-E305272- PGS (5086 4658) SGN-E306238- PGS (5056 4658) SGN-E267258- PGS (5302 4659) SGN-E294134- PGS (5302 4663) SGN-E335205- PGS (8552 8503,5349 4672) SGN-E210798- PGS (8541 8503,5349 4672) SGN-E340366- PGS (5354 4672) SGN-E212433- PGS (5302 4672) SGN-E213091- PGS (5302 4672) SGN-E302616- PGS (5153 4672) SGN-E279388- PGS (4888 4682) SGN-E303218- PGS (5177 4683) SGN-E286425- PGS (5349 4706) SGN-E260562- PGS (5347 4706) SGN-E212978- PGS (5322 4706) SGN-E276677- PGS (5322 4706) SGN-E209968- PGS (5302 4706) SGN-E211803- PGS (5302 4706) SGN-E212383- PGS (5302 4706) SGN-E211072- PGS (5302 4706) SGN-E251623- PGS (5302 4706) SGN-E211417- PGS (5302 4706) SGN-E256710- PGS (5302 4706) SGN-E303485- PGS (5299 4706) SGN-E276027- PGS (5299 4706) SGN-E307742- PGS (5299 4706) SGN-E255554- PGS (5221 4706) SGN-E273742- PGS (5213 4706) SGN-E210488- PGS (5213 4706) SGN-E206152- PGS (5204 4706) SGN-E288509- PGS (8541 8503,5349 4710) SGN-E540205+ PGS (5355 4712) SGN-E305583- PGS (5224 4714) SGN-E306399- PGS (8552 8503,5349 4716) SGN-E263617- PGS (5352 4718) SGN-E213536- PGS (8552 8503,5349 4719) SGN-E212205- PGS (5314 4734) SGN-E301650- PGS (5200 4734) SGN-E334899- PGS (8552 8503,5349 4735) SGN-E213837- PGS (5323 4735) SGN-E253452- PGS (5323 4735) SGN-E253886- PGS (5322 4735) SGN-E254383- PGS (5347 4737) SGN-E213897- PGS (5202 4762) SGN-E208167- PGS (5349 4781) SGN-E350897- PGS (5116 4781) SGN-E306515- PGS (8541 8503,5349 4791) SGN-E355282- PGS (5301 4804) SGN-E201255- PGS (5040 4809) SGN-E290848- PGS (8555 8503,5349 4815) SGN-E375347- PGS (8541 8503,5349 4822) SGN-E352685- PGS (8552 8503,5349 4833) SGN-E212616- PGS (5085 4836) SGN-E357567- PGS (8555 8503,5349 4841) SGN-E210719- PGS (8555 8503,5349 4841) SGN-E210726- PGS (8555 8503,5349 4845) SGN-E210944- PGS (5345 4845) SGN-E256630- PGS (8541 8503,5349 4851) SGN-E302617+ PGS (8555 8503,5349 4857) SGN-E538599- PGS (8541 8503,5349 4939) SGN-E295156- PGS (8541 8503,5349 4953) SGN-E354307- PGS (8541 8503,5349 4953) SGN-E357558- PGS (8541 8503,5349 4953) SGN-E357673- PGS (8541 8503,5349 4956) SGN-E353160- PGS (8541 8503,5349 4956) SGN-E355505- PGS (8541 8503,5349 4977) SGN-E355527- PGS (8541 8503,5349 4983) SGN-E351103- PGS (8541 8503,5349 4983) SGN-E357512- PGS (8541 8503,5349 4986) SGN-E350942- PGS (8541 8503,5349 4995) SGN-E351796- PGS (8541 8503,5349 5021) SGN-E295085+ PGS (8541 8503,5349 5046) SGN-E349779- PGS (8541 8503,5349 5078) SGN-E299150- 3-phase translation of AGS-1 (-strand): . . . . . . : 8555 GCAACTTCAAGAGTACTTGTAGGCATCTCCAATGGGAAATTTGTTGTTTCATT : AGCCATA A T S R V L V G I S N G K F V V S L : A I Q L Q E Y L - A S P M G N L L F H : - P - N F K S T C R H L Q W E I C C F I : S H . . . . . . 5342 AGGACAAAACATAACCTTGTAGTCTGTAGTCCAACTCTGACAAGTAAAAGTACTTGTTGG R T K H N L V V C S P T L T S K S T C W G Q N I T L - S V V Q L - Q V K V L V G K D K T - P C S L - S N S D K - K Y L L . . . . . . 5282 ATCGTCTTGAGGATAACTATAGGCATCGGGACATCTTTGTTTGAAAAATCTTGACAAATC I V L R I T I G I G T S L F E K S - Q I S S - G - L - A S G H L C L K N L D K S D R L E D N Y R H R D I F V - K I L T N . . . . . . 5222 GGTAGGACCACATGGACCTTGAGTGCAACAATATTGTTGTCCTCCGAATGTAGTACAAGG G R T T W T L S A T I L L S S E C S T R V G P H G P - V Q Q Y C C P P N V V Q G R - D H M D L E C N N I V V L R M - Y K . . . . . . 5162 GTTGTTACATCCTCCGGGTACCCTAAGTGAACCAGGGCATTCACCGTTTATATTAGCAAC V V T S S G Y P K - T R A F T V Y I S N L L H P P G T L S E P G H S P F I L A T G C Y I L R V P - V N Q G I H R L Y - Q . . . . . . 5102 ACATTGAATTGGATGACATTTTCCCGGCCCAGGGTTAGTTGGGCCGAAAGACATAGGGAT T L N W M T F S R P R V S W A E R H R D H - I G - H F P G P G L V G P K D I G M H I E L D D I F P A Q G - L G R K T - G . . . . . . 5042 GTTGAATCCATCAATAACAGAAATGTCCCAGAAATCTAAGTTGCTAAATTGATTCAAAGC V E S I N N R N V P E I - V A K L I Q S L N P S I T E M S Q K S K L L N - F K A C - I H Q - Q K C P R N L S C - I D S K . . . . . . 4982 GTATTCAGCTAAGGTGTTTGGTGGTTTACCCCATCCTTTGCATTCCAAGACTCCACCACA V F S - G V W W F T P S F A F Q D S T T Y S A K V F G G L P H P L H S K T P P Q R I Q L R C L V V Y P I L C I P R L H H . . . . . . 4922 ATCACCGGTCTGGCACCAACCTCTACCAGCACCATCAAAATTGCAATTAGTACGACCCCA I T G L A P T S T S T I K I A I S T T P S P V W H Q P L P A P S K L Q L V R P Q N H R S G T N L Y Q H H Q N C N - Y D P . . . . . . 4862 AATACGTGCCATTTTGGTGCCCGGTGGAGCCCAAAACCACCAACTTTGACCTCTCTCGAG N T C H F G A R W S P K P P T L T S L E I R A I L V P G G A Q N H Q L - P L S R K Y V P F W C P V E P K T T N F D L S R . . . . . . 4802 ACGTCGGCCACCTCCTACGGGAGTCGCCGCTGCCCATACGGTGTATGGACAGTTGTTATG T S A T S Y G S R R C P Y G V W T V V M R R P P P T G V A A A H T V Y G Q L L W D V G H L L R E S P L P I R C M D S C Y . . . . . . 4742 GACCTCAAATACACCGGAAGCATAAGTGTAAGTCACAAAGGCAAGGAGAAAGAACACTAA D L K Y T G S I S V S H K G K E K E H - T S N T P E A - V - V T K A R R K N T K G P Q I H R K H K C K S Q R Q G E R T L . . . . . 4682 ACAAGTTGTCAAATGACTCATTTTAGAATAAAAGAAGAATATTT T S C Q M T H F R I K E E Y Q V V K - L I L E - K K N I N K L S N D S F - N K R R I F Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1-_PGL-3_AGS-1_PPS_1 (4970 4683) (frame '1'; 285 bp, 95 residues) 1 GVWWFTPSFA FQDSTTITGL APTSTSTIKI AISTTPNTCH FGARWSPKPP TLTSLETSAT 61 SYGSRRCPYG VWTVVMDLKY TGSISVSHKG KEKEH- AGS-2 (5606 4672) SCR (e 0.780) Exon 1 5606 4672 ( 935 n); score: 0.780 PGS (5403 4672) SGN-E210966- PGS (5386 4672) SGN-E213606- PGS (5404 4706) SGN-E263607- PGS (5423 4733) SGN-E542649- PGS (5460 4747) SGN-E212860- PGS (5399 4749) SGN-E258673- PGS (5399 4815) SGN-E211610- PGS (5547 4820) SGN-E357015- PGS (5423 4842) SGN-E295872- PGS (5606 4848) SGN-E548946+ PGS (5423 4848) SGN-E357685- PGS (5523 4854) SGN-E357464- PGS (5405 4854) SGN-E351866- PGS (5523 4878) SGN-E350938- PGS (5599 4904) SGN-E373165+ PGS (5599 4905) SGN-E373166- PGS (5451 4905) SGN-E291342- PGS (5427 4905) SGN-E292854- PGS (5399 4906) SGN-E208399- PGS (5571 4928) SGN-E352998- PGS (5525 4935) SGN-E551414- PGS (5562 4936) SGN-E206005- PGS (5570 4985) SGN-E353171- PGS (5566 4985) SGN-E308347- PGS (5559 5001) SGN-E302004- PGS (5547 5024) SGN-E353161- PGS (5547 5024) SGN-E354792- PGS (5599 5086) SGN-E206137+ PGS (5547 5089) SGN-E351855- PGS (5547 5095) SGN-E351304- PGS (5574 5176) SGN-E543859+ 3-phase translation of AGS-2 (-strand): . . . . . . 5606 GATATAATTTCAATTTAAAATTAAAATACCATATATAAGACAAAGCATCGATCATAGATT D I I S I - N - N T I Y K T K H R S - I I - F Q F K I K I P Y I R Q S I D H R L Y N F N L K L K Y H I - D K A S I I D . . . . . . 5546 GTTATTCAGATCTTAGCCACTTCAAACAAACAAATGTAAAAGAAATGTGTACAAGGCAAA V I Q I L A T S N K Q M - K K C V Q G K L F R S - P L Q T N K C K R N V Y K A N C Y S D L S H F K Q T N V K E M C T R Q . . . . . . 5486 TTAAAGACAATGTCCATCTTCAAAACAAATTTAACAAAAAAGAGATTGGCTCAACTCAAG L K T M S I F K T N L T K K R L A Q L K - R Q C P S S K Q I - Q K R D W L N S R I K D N V H L Q N K F N K K E I G S T Q . . . . . . 5426 ATTTCTACTTAATTAAGCCACTTCAAGAGTATTTGTAGGAATCTCCAATGGGAAATTTGT I S T - L S H F K S I C R N L Q W E I C F L L N - A T S R V F V G I S N G K F V D F Y L I K P L Q E Y L - E S P M G N L . . . . . . 5366 TGTTTCATTGTGAGTAGAGCCATAAGGACAAAACATAACCTTGTAGTCTGTAGTCCAACT C F I V S R A I R T K H N L V V C S P T V S L - V E P - G Q N I T L - S V V Q L L F H C E - S H K D K T - P C S L - S N . . . . . . 5306 CTGACAAGTAAAAGTACTTGTTGGATCGTCTTGAGGATAACTATAGGCATCGGGACATCT L T S K S T C W I V L R I T I G I G T S - Q V K V L V G S S - G - L - A S G H L S D K - K Y L L D R L E D N Y R H R D I . . . . . . 5246 TTGTTTGAAAAATCTTGACAAATCGGTAGGACCACATGGACCTTGAGTGCAACAATATTG L F E K S - Q I G R T T W T L S A T I L C L K N L D K S V G P H G P - V Q Q Y C F V - K I L T N R - D H M D L E C N N I . . . . . . 5186 TTGTCCTCCGAATGTAGTACAAGGGTTGTTACATCCTCCGGGTACCCTAAGTGAACCAGG L S S E C S T R V V T S S G Y P K - T R C P P N V V Q G L L H P P G T L S E P G V V L R M - Y K G C Y I L R V P - V N Q . . . . . . 5126 GCATTCACCGTTTATATTAGCAACACATTGAATTGGATGACATTTTCCCGGCCCAGGGTT A F T V Y I S N T L N W M T F S R P R V H S P F I L A T H - I G - H F P G P G L G I H R L Y - Q H I E L D D I F P A Q G . . . . . . 5066 AGTTGGGCCGAAAGACATAGGGATGTTGAATCCATCAATAACAGAAATGTCCCAGAAATC S W A E R H R D V E S I N N R N V P E I V G P K D I G M L N P S I T E M S Q K S - L G R K T - G C - I H Q - Q K C P R N . . . . . . 5006 TAAGTTGCTAAATTGATTCAAAGCGTATTCAGCTAAGGTGTTTGGTGGTTTACCCCATCC - V A K L I Q S V F S - G V W W F T P S K L L N - F K A Y S A K V F G G L P H P L S C - I D S K R I Q L R C L V V Y P I . . . . . . 4946 TTTGCATTCCAAGACTCCACCACAATCACCGGTCTGGCACCAACCTCTACCAGCACCATC F A F Q D S T T I T G L A P T S T S T I L H S K T P P Q S P V W H Q P L P A P S L C I P R L H H N H R S G T N L Y Q H H . . . . . . 4886 AAAATTGCAATTAGTACGACCCCAAATACGTGCCATTTTGGTGCCCGGTGGAGCCCAAAA K I A I S T T P N T C H F G A R W S P K K L Q L V R P Q I R A I L V P G G A Q N Q N C N - Y D P K Y V P F W C P V E P K . . . . . . 4826 CCACCAACTTTGACCTCTCTCGAGACGTCGGCCACCTCCTACGGGAGTCGCCGCTGCCCA P P T L T S L E T S A T S Y G S R R C P H Q L - P L S R R R P P P T G V A A A H T T N F D L S R D V G H L L R E S P L P . . . . . . 4766 TACGGTGTATGGACAGTTGTTATGGACCTCAAATACACCGGAAGCATAAGTGTAAGTCAC Y G V W T V V M D L K Y T G S I S V S H T V Y G Q L L W T S N T P E A - V - V T I R C M D S C Y G P Q I H R K H K C K S . . . . 4706 AAAGGCAAGGAGAAAGAACACTAAACAAGTTGTCA K G K E K E H - T S C K A R R K N T K Q V V Q R Q G E R T L N K L S Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1-_PGL-3_AGS-2_PPS_1 (4970 4683) (frame '1'; 285 bp, 95 residues) 1 GVWWFTPSFA FQDSTTITGL APTSTSTIKI AISTTPNTCH FGARWSPKPP TLTSLETSAT 61 SYGSRRCPYG VWTVVMDLKY TGSISVSHKG KEKEH- 3-phase translation of AGS-2 (+strand): . . . . . . 4672 TGACAACTTGTTTAGTGTTCTTTCTCCTTGCCTTTGTGACTTACACTTATGCTTCCGGTG - Q L V - C S F S L P L - L T L M L P V D N L F S V L S P C L C D L H L C F R C T T C L V F F L L A F V T Y T Y A S G . . . . . . 4732 TATTTGAGGTCCATAACAACTGTCCATACACCGTATGGGCAGCGGCGACTCCCGTAGGAG Y L R S I T T V H T P Y G Q R R L P - E I - G P - Q L S I H R M G S G D S R R R V F E V H N N C P Y T V W A A A T P V G . . . . . . 4792 GTGGCCGACGTCTCGAGAGAGGTCAAAGTTGGTGGTTTTGGGCTCCACCGGGCACCAAAA V A D V S R E V K V G G F G L H R A P K W P T S R E R S K L V V L G S T G H Q N G G R R L E R G Q S W W F W A P P G T K . . . . . . 4852 TGGCACGTATTTGGGGTCGTACTAATTGCAATTTTGATGGTGCTGGTAGAGGTTGGTGCC W H V F G V V L I A I L M V L V E V G A G T Y L G S Y - L Q F - W C W - R L V P M A R I W G R T N C N F D G A G R G W C . . . . . . 4912 AGACCGGTGATTGTGGTGGAGTCTTGGAATGCAAAGGATGGGGTAAACCACCAAACACCT R P V I V V E S W N A K D G V N H Q T P D R - L W W S L G M Q R M G - T T K H L Q T G D C G G V L E C K G W G K P P N T . . . . . . 4972 TAGCTGAATACGCTTTGAATCAATTTAGCAACTTAGATTTCTGGGACATTTCTGTTATTG - L N T L - I N L A T - I S G T F L L L S - I R F E S I - Q L R F L G H F C Y - L A E Y A L N Q F S N L D F W D I S V I . . . . . . 5032 ATGGATTCAACATCCCTATGTCTTTCGGCCCAACTAACCCTGGGCCGGGAAAATGTCATC M D S T S L C L S A Q L T L G R E N V I W I Q H P Y V F R P N - P W A G K M S S D G F N I P M S F G P T N P G P G K C H . . . . . . 5092 CAATTCAATGTGTTGCTAATATAAACGGTGAATGCCCTGGTTCACTTAGGGTACCCGGAG Q F N V L L I - T V N A L V H L G Y P E N S M C C - Y K R - M P W F T - G T R R P I Q C V A N I N G E C P G S L R V P G . . . . . . 5152 GATGTAACAACCCTTGTACTACATTCGGAGGACAACAATATTGTTGCACTCAAGGTCCAT D V T T L V L H S E D N N I V A L K V H M - Q P L Y Y I R R T T I L L H S R S M G C N N P C T T F G G Q Q Y C C T Q G P . . . . . . 5212 GTGGTCCTACCGATTTGTCAAGATTTTTCAAACAAAGATGTCCCGATGCCTATAGTTATC V V L P I C Q D F S N K D V P M P I V I W S Y R F V K I F Q T K M S R C L - L S C G P T D L S R F F K Q R C P D A Y S Y . . . . . . 5272 CTCAAGACGATCCAACAAGTACTTTTACTTGTCAGAGTTGGACTACAGACTACAAGGTTA L K T I Q Q V L L L V R V G L Q T T R L S R R S N K Y F Y L S E L D Y R L Q G Y P Q D D P T S T F T C Q S W T T D Y K V . . . . . . 5332 TGTTTTGTCCTTATGGCTCTACTCACAATGAAACAACAAATTTCCCATTGGAGATTCCTA C F V L M A L L T M K Q Q I S H W R F L V L S L W L Y S Q - N N K F P I G D S Y M F C P Y G S T H N E T T N F P L E I P . . . . . . 5392 CAAATACTCTTGAAGTGGCTTAATTAAGTAGAAATCTTGAGTTGAGCCAATCTCTTTTTT Q I L L K W L N - V E I L S - A N L F F K Y S - S G L I K - K S - V E P I S F L T N T L E V A - L S R N L E L S Q S L F . . . . . . 5452 GTTAAATTTGTTTTGAAGATGGACATTGTCTTTAATTTGCCTTGTACACATTTCTTTTAC V K F V L K M D I V F N L P C T H F F Y L N L F - R W T L S L I C L V H I S F T C - I C F E D G H C L - F A L Y T F L L . . . . . . 5512 ATTTGTTTGTTTGAAGTGGCTAAGATCTGAATAACAATCTATGATCGATGCTTTGTCTTA I C L F E V A K I - I T I Y D R C F V L F V C L K W L R S E - Q S M I D A L S Y H L F V - S G - D L N N N L - S M L C L . . . . 5572 TATATGGTATTTTAATTTTAAATTGAAATTATATC Y M V F - F - I E I I I W Y F N F K L K L Y I Y G I L I L N - N Y I Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1+_PGL-3_AGS-2_PPS_1 (4674 5414) (frame '0'; 738 bp, 246 residues) 1 TTCLVFFLLA FVTYTYASGV FEVHNNCPYT VWAAATPVGG GRRLERGQSW WFWAPPGTKM 61 ARIWGRTNCN FDGAGRGWCQ TGDCGGVLEC KGWGKPPNTL AEYALNQFSN LDFWDISVID 121 GFNIPMSFGP TNPGPGKCHP IQCVANINGE CPGSLRVPGG CNNPCTTFGG QQYCCTQGPC 181 GPTDLSRFFK QRCPDAYSYP QDDPTSTFTC QSWTTDYKVM FCPYGSTHNE TTNFPLEIPT 241 NTLEVA- AGS-3 (10420 10280,10247 10207,10029 9971,9939 9841,7078 7062,6615 6601,5515 5494) SCR (e 0.904 d 0.000 a 0.000,e 0.878 d 0.438 a 0.817,e 0.922 d 0.000 a 0.000,e 0.854 d 0.000 a 0.962,e 0.824 d 0.000 a 0.705,e 0.733 d 0.000 a 0.000,e 0.727) Exon 1 10420 10280 ( 141 n); score: 0.904 Intron 1 10279 10248 ( 32 n); Pd: 0.000 Pa: 0.000 Exon 2 10247 10207 ( 41 n); score: 0.878 Intron 2 10206 10030 ( 177 n); Pd: 0.438 Pa: 0.817 Exon 3 10029 9971 ( 59 n); score: 0.922 Intron 3 9970 9940 ( 31 n); Pd: 0.000 Pa: 0.000 Exon 4 9939 9841 ( 99 n); score: 0.854 Intron 4 9840 7079 (2762 n); Pd: 0.000 Pa: 0.962 Exon 5 7078 7062 ( 17 n); score: 0.824 Intron 5 7061 6616 ( 446 n); Pd: 0.000 Pa: 0.705 Exon 6 6615 6601 ( 15 n); score: 0.733 Intron 6 6600 5516 (1085 n); Pd: 0.000 Pa: 0.000 Exon 7 5515 5494 ( 22 n); score: 0.727 PGS (10028 9971,9939 9841,7078 7062,6615 6601,5515 5494) SGN-E371327+ PGS (10420 10280,10247 10207,10029 10017) SGN-E394141+ 3-phase translation of AGS-3 (-strand): . . . . . . 10420 TCGCCTCTCTCTCTTTATACACAAAAGTGTATAAATTGTGTTTCTGTTTTGTATAAGCGA S P L S L Y T Q K C I N C V S V L Y K R R L S L F I H K S V - I V F L F C I S E A S L S L Y T K V Y K L C F C F V - A . . . . . . 10360 GAGAAAACTGTATATACACATGCAAAAACATATATCTTCGTGTTATACACTTAATTATAC E K T V Y T H A K T Y I F V L Y T - L Y R K L Y I H M Q K H I S S C Y T L N Y T R E N C I Y T C K N I Y L R V I H L I I . . . : . . . 10300 AATTTACAAATATTTTACTTC : AAATATTGCAGCGAAAAAGGCGAACGAATTATACAATTG N L Q I F Y F : K Y C S E K G E R I I Q L I Y K Y F T S : N I A A K K A N E L Y N C Q F T N I L L : Q I L Q R K R R T N Y T I . : . . . . . 10208 CA : AGAATTATACAATATGCATTATACAATTGCAGTGAAATATGATAGCGAATTATACAAT Q : E L Y N M H Y T I A V K Y D S E L Y N : K N Y T I C I I Q L Q - N M I A N Y T I A : R I I Q Y A L Y N C S E I - - R I I Q . : . . . . . 9971 T : GTATATTATAGTGAATTATACAGTTTTATGTTTGCTATGGAGCGTAATTATACAAATTT : C I L - - I I Q F Y V C Y G A - L Y K F : V Y Y S E L Y S F M F A M E R N Y T N F L : Y I I V N Y T V L C L L W S V I I Q I . . . . : . . : 9880 TGCTATAACACACAAATATAAATTTTTTATTTGCTATATG : TCAAAAAAGTTGAGCAA : AAA C Y N T Q I - I F Y L L Y : V K K V E Q : K A I T H K Y K F F I C Y M : S K K L S K : N L L - H T N I N F L F A I C : Q K S - A : K . . : . . 6612 TCAATCAAAATT : AAATGTAAAAGAAATGTGTACA S I K I : K C K R N V Y Q S K L : N V K E M C T I N Q N : - M - K K C V Maximal non-overlapping open reading frames (>= 64 codons): none AGS-4 (8764 7784) SCR (e 1.000) Exon 1 8764 7784 ( 981 n); score: 1.000 PGS (8246 7784) SGN-E310129- PGS (8449 7797) SGN-E305774- PGS (8414 7797) SGN-E209843- PGS (8390 7797) SGN-E207039- PGS (8388 7797) SGN-E543853- PGS (8323 7797) SGN-E304108- PGS (8246 7797) SGN-E310823- PGS (8231 7797) SGN-E301999- PGS (8385 7803) SGN-E268610- PGS (8368 7803) SGN-E305497- PGS (8283 7803) SGN-E305272- PGS (8231 7803) SGN-E306238- PGS (8202 7803) SGN-E267258- PGS (8342 7804) SGN-E215146- PGS (8348 7814) SGN-E275948- PGS (8342 7814) SGN-E206874- PGS (8298 7817) SGN-E279388- PGS (8342 7820) SGN-E208900- PGS (8033 7827) SGN-E303218- PGS (8322 7828) SGN-E286425- PGS (8342 7851) SGN-E335641- PGS (8342 7852) SGN-E209439- PGS (8500 7857) SGN-E305583- PGS (8492 7858) SGN-E214128- PGS (8369 7859) SGN-E306399- PGS (8342 7863) SGN-E311822- PGS (8625 7878) SGN-E542649- PGS (8459 7879) SGN-E301650- PGS (8409 7880) SGN-E336261- PGS (8560 7892) SGN-E212860- PGS (8348 7894) SGN-E253792- PGS (8347 7907) SGN-E208167- PGS (8261 7927) SGN-E306515- PGS (8342 7936) SGN-E273584- PGS (8446 7949) SGN-E201255- PGS (8185 7954) SGN-E290848- PGS (8468 7960) SGN-E204787- PGS (8703 7965) SGN-E357015- PGS (8468 7978) SGN-E200099- PGS (8230 7980) SGN-E357567- PGS (8580 7986) SGN-E295872- PGS (8447 7987) SGN-E201711- PGS (8555 7990) SGN-E268624- PGS (8649 7991) SGN-E357685- PGS (8691 7993) SGN-E548946+ PGS (8667 7999) SGN-E357464- PGS (8581 7999) SGN-E351866- PGS (8555 8014) SGN-E538598+ PGS (8555 8017) SGN-E353136- PGS (8444 8022) SGN-E203547- PGS (8667 8023) SGN-E350938- PGS (8552 8044) SGN-E252885- PGS (8429 8044) SGN-E206738- PGS (8695 8049) SGN-E373165+ PGS (8691 8050) SGN-E373166- PGS (8596 8050) SGN-E291342- PGS (8567 8050) SGN-E292854- PGS (8544 8051) SGN-E208399- PGS (8555 8056) SGN-E274671- PGS (8555 8056) SGN-E276802- PGS (8468 8056) SGN-E275197- PGS (8468 8064) SGN-E206043- PGS (8552 8071) SGN-E209133- PGS (8713 8073) SGN-E352998- PGS (8555 8078) SGN-E357805- PGS (8444 8078) SGN-E301453- PGS (8691 8081) SGN-E206005- PGS (8669 8081) SGN-E551414- PGS (8555 8092) SGN-E206119- PGS (8555 8101) SGN-E357325- PGS (8555 8101) SGN-E357453- PGS (8555 8107) SGN-E353799- PGS (8555 8125) SGN-E263405+ PGS (8555 8125) SGN-E213158+ PGS (8409 8127) SGN-E258498- PGS (8555 8128) SGN-E255494- PGS (8712 8130) SGN-E353171- PGS (8707 8130) SGN-E308347- PGS (8555 8131) SGN-E274599- PGS (8555 8137) SGN-E213028+ PGS (8555 8146) SGN-E350782- PGS (8468 8146) SGN-E207626- PGS (8408 8146) SGN-E251433- PGS (8695 8150) SGN-E302004- PGS (8562 8156) SGN-E375346+ PGS (8764 8169) SGN-E353161- PGS (8764 8169) SGN-E354792- PGS (8555 8176) SGN-E351033- PGS (8555 8176) SGN-E356290- PGS (8549 8195) SGN-E260107- PGS (8555 8212) SGN-E214114- PGS (8555 8225) SGN-E356548- PGS (8740 8231) SGN-E206137+ PGS (8753 8234) SGN-E351855- PGS (8764 8240) SGN-E351304- PGS (8555 8260) SGN-E298580+ PGS (8555 8260) SGN-E276361+ PGS (8713 8321) SGN-E543859+ 3-phase translation of AGS-4 (-strand): . . . . . . 8764 TTAAACGATACTCCAAATGCACTCTTGTGTGAGAATTTTGAACATCATGTGTAAGACAAA L N D T P N A L L C E N F E H H V - D K - T I L Q M H S C V R I L N I M C K T N K R Y S K C T L V - E F - T S C V R Q . . . . . . 8704 TTAAAGTACAATATGTTATTGAAATCTTAGCCACCTCAAGATAACAAACTAAAAGAAATG L K Y N M L L K S - P P Q D N K L K E M - S T I C Y - N L S H L K I T N - K K C I K V Q Y V I E I L A T S R - Q T K R N . . . . . . 8644 TGGATAATACAAAAGACAAGTAATGAACAAAACTCAACCATTTTGAACAAGAAAGAGGTG W I I Q K T S N E Q N S T I L N K K E V G - Y K R Q V M N K T Q P F - T R K R W V D N T K D K - - T K L N H F E Q E R G . . . . . . 8584 GCTACACTCATGATGAATCTACTTATTAAGCAACTTCAAGAGTACTTGTAGGCATCTCCA A T L M M N L L I K Q L Q E Y L - A S P L H S - - I Y L L S N F K S T C R H L Q G Y T H D E S T Y - A T S R V L V G I S . . . . . . 8524 ATGGGAAATTTGTTGTTTCATTGTGAGTAGAGCCATAAGGACAGAACATTATCTTGTAGT M G N L L F H C E - S H K D R T L S C S W E I C C F I V S R A I R T E H Y L V V N G K F V V S L - V E P - G Q N I I L - . . . . . . 8464 CTGTAGTCCAACTCTGACAAGTAAAAGTACTAGTTGGATCGTCTTGAGGGTAACTATAGG L - S N S D K - K Y - L D R L E G N Y R C S P T L T S K S T S W I V L R V T I G S V V Q L - Q V K V L V G S S - G - L - . . . . . . 8404 CATCAGGACATCTTTGTTTGAAAAATCTTGACAATTCAGTAGGACCACATGGACCGTGAT H Q D I F V - K I L T I Q - D H M D R D I R T S L F E K S - Q F S R T T W T V I A S G H L C L K N L D N S V G P H G P - . . . . . . 8344 TACAACAATATTGTTGTCCTCCGAATGTTGTACAAGGGTTGTTACATCCTCCAGGTACCC Y N N I V V L R M L Y K G C Y I L Q V P T T I L L S S E C C T R V V T S S R Y P L Q Q Y C C P P N V V Q G L L H P P G T . . . . . . 8284 TAAGTGAACCAGGGCATTCACCGTTTATATTGGCTGTGCATTGAATTGGATGACATTTTC - V N Q G I H R L Y W L C I E L D D I F K - T R A F T V Y I G C A L N W M T F S L S E P G H S P F I L A V H - I G - H F . . . . . . 8224 CAGGGCCAGGCTTAGTTGGGCCAAAAGACATAGGGATGTTGAATCCATCAATAACAGAAA Q G Q A - L G Q K T - G C - I H Q - Q K R A R L S W A K R H R D V E S I N N R N P G P G L V G P K D I G M L N P S I T E . . . . . . 8164 TATCCCAAAAATCTAGGTTACCAAACTGGTTCAAAGCGTATTCAGCTAAGGTGTTTGGTG Y P K N L G Y Q T G S K R I Q L R C L V I P K I - V T K L V Q S V F S - G V W W I S Q K S R L P N W F K A Y S A K V F G . . . . . . 8104 GTTTACCCCATCCTTTGCAATCCAGGACTCCACCACAATCACCAGTCTGGCACCAACCTC V Y P I L C N P G L H H N H Q S G T N L F T P S F A I Q D S T T I T S L A P T S G L P H P L Q S R T P P Q S P V W H Q P . . . . . . 8044 TTCCAGCACCATCAAAGTTGCAATTAGTACGACCCCAAATACGTGCCATTTTAGTGCCAG F Q H H Q S C N - Y D P K Y V P F - C Q S S T I K V A I S T T P N T C H F S A R L P A P S K L Q L V R P Q I R A I L V P . . . . . . 7984 GTGGGGCCCAAAACCACCAACTCTGACCTCTCTCGAGACGTCGACCACCTCCTACGGGGA V G P K T T N S D L S R D V D H L L R G W G P K P P T L T S L E T S T T S Y G D G G A Q N H Q L - P L S R R R P P P T G . . . . . . 7924 CCGCTGCCGCCCAAACGGTGTAGGGGCAGTTGTTATGGACCTCAAATACACCGGAACCAT P L P P K R C R G S C Y G P Q I H R N H R C R P N G V G A V V M D L K Y T G T I T A A A Q T V - G Q L L W T S N T P E P . . . . . . 7864 AAGTGTAAGTCACAAAGGCAAGGAGAAAAAACACTAAACAAGTTGTCAAGTGACTCATTT K C K S Q R Q G E K T L N K L S S D S F S V S H K G K E K K H - T S C Q V T H F - V - V T K A R R K N T K Q V V K - L I . . . 7804 TAGTATAAGAAGTTGTAGGAT - Y K K L - D S I R S C R L V - E V V G Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1-_PGL-3_AGS-4_PPS_1 (8115 7828) (frame '2'; 285 bp, 95 residues) 1 GVWWFTPSFA IQDSTTITSL APTSSSTIKV AISTTPNTCH FSARWGPKPP TLTSLETSTT 61 SYGDRCRPNG VGAVVMDLKY TGTISVSHKG KEKKH- >C08HBa0235H18.1-_PGL-3_AGS-4_PPS_2 (8231 7959) (frame '0'; 270 bp, 90 residues) 1 HFPGPGLVGP KDIGMLNPSI TEISQKSRLP NWFKAYSAKV FGGLPHPLQS RTPPQSPVWH 61 QPLPAPSKLQ LVRPQIRAIL VPGGAQNHQL - >C08HBa0235H18.1-_PGL-3_AGS-4_PPS_3 (8568 8374) (frame '2'; 192 bp, 64 residues) 1 IYLLSNFKST CRHLQWEICC FIVSRAIRTE HYLVVCSPTL TSKSTSWIVL RVTIGIRTSL 61 FEKS- 3-phase translation of AGS-4 (+strand): . . . . . . 7784 ATCCTACAACTTCTTATACTAAAATGAGTCACTTGACAACTTGTTTAGTGTTTTTTCTCC I L Q L L I L K - V T - Q L V - C F F S S Y N F L Y - N E S L D N L F S V F S P P T T S Y T K M S H L T T C L V F F L . . . . . . 7844 TTGCCTTTGTGACTTACACTTATGGTTCCGGTGTATTTGAGGTCCATAACAACTGCCCCT L P L - L T L M V P V Y L R S I T T A P C L C D L H L W F R C I - G P - Q L P L L A F V T Y T Y G S G V F E V H N N C P . . . . . . 7904 ACACCGTTTGGGCGGCAGCGGTCCCCGTAGGAGGTGGTCGACGTCTCGAGAGAGGTCAGA T P F G R Q R S P - E V V D V S R E V R H R L G G S G P R R R W S T S R E R S E Y T V W A A A V P V G G G R R L E R G Q . . . . . . 7964 GTTGGTGGTTTTGGGCCCCACCTGGCACTAAAATGGCACGTATTTGGGGTCGTACTAATT V G G F G P H L A L K W H V F G V V L I L V V L G P T W H - N G T Y L G S Y - L S W W F W A P P G T K M A R I W G R T N . . . . . . 8024 GCAACTTTGATGGTGCTGGAAGAGGTTGGTGCCAGACTGGTGATTGTGGTGGAGTCCTGG A T L M V L E E V G A R L V I V V E S W Q L - W C W K R L V P D W - L W W S P G C N F D G A G R G W C Q T G D C G G V L . . . . . . 8084 ATTGCAAAGGATGGGGTAAACCACCAAACACCTTAGCTGAATACGCTTTGAACCAGTTTG I A K D G V N H Q T P - L N T L - T S L L Q R M G - T T K H L S - I R F E P V W D C K G W G K P P N T L A E Y A L N Q F . . . . . . 8144 GTAACCTAGATTTTTGGGATATTTCTGTTATTGATGGATTCAACATCCCTATGTCTTTTG V T - I F G I F L L L M D S T S L C L L - P R F L G Y F C Y - W I Q H P Y V F W G N L D F W D I S V I D G F N I P M S F . . . . . . 8204 GCCCAACTAAGCCTGGCCCTGGAAAATGTCATCCAATTCAATGCACAGCCAATATAAACG A Q L S L A L E N V I Q F N A Q P I - T P N - A W P W K M S S N S M H S Q Y K R G P T K P G P G K C H P I Q C T A N I N . . . . . . 8264 GTGAATGCCCTGGTTCACTTAGGGTACCTGGAGGATGTAACAACCCTTGTACAACATTCG V N A L V H L G Y L E D V T T L V Q H S - M P W F T - G T W R M - Q P L Y N I R G E C P G S L R V P G G C N N P C T T F . . . . . . 8324 GAGGACAACAATATTGTTGTAATCACGGTCCATGTGGTCCTACTGAATTGTCAAGATTTT E D N N I V V I T V H V V L L N C Q D F R T T I L L - S R S M W S Y - I V K I F G G Q Q Y C C N H G P C G P T E L S R F . . . . . . 8384 TCAAACAAAGATGTCCTGATGCCTATAGTTACCCTCAAGACGATCCAACTAGTACTTTTA S N K D V L M P I V T L K T I Q L V L L Q T K M S - C L - L P S R R S N - Y F Y F K Q R C P D A Y S Y P Q D D P T S T F . . . . . . 8444 CTTGTCAGAGTTGGACTACAGACTACAAGATAATGTTCTGTCCTTATGGCTCTACTCACA L V R V G L Q T T R - C S V L M A L L T L S E L D Y R L Q D N V L S L W L Y S Q T C Q S W T T D Y K I M F C P Y G S T H . . . . . . 8504 ATGAAACAACAAATTTCCCATTGGAGATGCCTACAAGTACTCTTGAAGTTGCTTAATAAG M K Q Q I S H W R C L Q V L L K L L N K - N N K F P I G D A Y K Y S - S C L I S N E T T N F P L E M P T S T L E V A - - . . . . . . 8564 TAGATTCATCATGAGTGTAGCCACCTCTTTCTTGTTCAAAATGGTTGAGTTTTGTTCATT - I H H E C S H L F L V Q N G - V L F I R F I M S V A T S F L F K M V E F C S L V D S S - V - P P L S C S K W L S F V H . . . . . . 8624 ACTTGTCTTTTGTATTATCCACATTTCTTTTAGTTTGTTATCTTGAGGTGGCTAAGATTT T C L L Y Y P H F F - F V I L R W L R F L V F C I I H I S F S L L S - G G - D F Y L S F V L S T F L L V C Y L E V A K I . . . . . . 8684 CAATAACATATTGTACTTTAATTTGTCTTACACATGATGTTCAAAATTCTCACACAAGAG Q - H I V L - F V L H M M F K I L T Q E N N I L Y F N L S Y T - C S K F S H K S S I T Y C T L I C L T H D V Q N S H T R . . . 8744 TGCATTTGGAGTATCGTTTAA C I W S I V - A F G V S F V H L E Y R L Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1+_PGL-3_AGS-4_PPS_1 (7786 8559) (frame '0'; 771 bp, 257 residues) 1 PTTSYTKMSH LTTCLVFFLL AFVTYTYGSG VFEVHNNCPY TVWAAAVPVG GGRRLERGQS 61 WWFWAPPGTK MARIWGRTNC NFDGAGRGWC QTGDCGGVLD CKGWGKPPNT LAEYALNQFG 121 NLDFWDISVI DGFNIPMSFG PTKPGPGKCH PIQCTANING ECPGSLRVPG GCNNPCTTFG 181 GQQYCCNHGP CGPTELSRFF KQRCPDAYSY PQDDPTSTFT CQSWTTDYKI MFCPYGSTHN 241 ETTNFPLEMP TSTLEVA- AGS-5 (10046 9797) SCR (e 0.760) Exon 1 10046 9797 ( 250 n); score: 0.760 PGS (10046 9797) SGN-E379427+ 3-phase translation of AGS-5 (-strand): . . . . . . 10046 TTATACAAATATTGCAGAGAATTATACAATATGCATTATACAATTGCAGTGAAATATGAT L Y K Y C R E L Y N M H Y T I A V K Y D Y T N I A E N Y T I C I I Q L Q - N M I I Q I L Q R I I Q Y A L Y N C S E I - . . . . . . 9986 AGCGAATTATACAATTGCGGCGAAATAGGCCAGCAAATTATACAATTGTATATTATAGTG S E L Y N C G E I G Q Q I I Q L Y I I V A N Y T I A A K - A S K L Y N C I L - - - R I I Q L R R N R P A N Y T I V Y Y S . . . . . . 9926 AATTATACAGTTTTATGTTTGCTATGGAGCGTAATTATACAAATTTTGCTATAACACACA N Y T V L C L L W S V I I Q I L L - H T I I Q F Y V C Y G A - L Y K F C Y N T Q E L Y S F M F A M E R N Y T N F A I T H . . . . . . 9866 AATATAAATTTTTTATTTGCTATATGCGAAAGTTGTCCTAAAACAATTAACAACATTACT N I N F L F A I C E S C P K T I N N I T I - I F Y L L Y A K V V L K Q L T T L L K Y K F F I C Y M R K L S - N N - Q H Y . 9806 CTTGAAAATA L E N L K I S - K Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-5 (+strand): . . . . . . 9797 TATTTTCAAGAGTAATGTTGTTAATTGTTTTAGGACAACTTTCGCATATAGCAAATAAAA Y F Q E - C C - L F - D N F R I - Q I K I F K S N V V N C F R T T F A Y S K - K F S R V M L L I V L G Q L S H I A N K . . . . . . 9857 AATTTATATTTGTGTGTTATAGCAAAATTTGTATAATTACGCTCCATAGCAAACATAAAA N L Y L C V I A K F V - L R S I A N I K I Y I C V L - Q N L Y N Y A P - Q T - N K F I F V C Y S K I C I I T L H S K H K . . . . . . 9917 CTGTATAATTCACTATAATATACAATTGTATAATTTGCTGGCCTATTTCGCCGCAATTGT L Y N S L - Y T I V - F A G L F R R N C C I I H Y N I Q L Y N L L A Y F A A I V T V - F T I I Y N C I I C W P I S P Q L . . . . . . 9977 ATAATTCGCTATCATATTTCACTGCAATTGTATAATGCATATTGTATAATTCTCTGCAAT I I R Y H I S L Q L Y N A Y C I I L C N - F A I I F H C N C I M H I V - F S A I Y N S L S Y F T A I V - C I L Y N S L Q . 10037 ATTTGTATAA I C I F V - Y L Y Maximal non-overlapping open reading frames (>= 64 codons): none AGS-6 (10420 10076) SCR (e 0.845) Exon 1 10420 10076 ( 345 n); score: 0.845 PGS (10420 10076) SGN-E394609- PGS (10420 10076) SGN-E379112+ PGS (10418 10076) SGN-E393065- PGS (10416 10076) SGN-E393076- PGS (10398 10076) SGN-E393075- PGS (10222 10076) SGN-E392727- PGS (10420 10077) SGN-E379618- PGS (10420 10077) SGN-E200845- 3-phase translation of AGS-6 (-strand): . . . . . . 10420 TCGCCTCTCTCTCTTTATACACAAAAGTGTATAAATTGTGTTTCTGTTTTGTATAAGCGA S P L S L Y T Q K C I N C V S V L Y K R R L S L F I H K S V - I V F L F C I S E A S L S L Y T K V Y K L C F C F V - A . . . . . . 10360 GAGAAAACTGTATATACACATGCAAAAACATATATCTTCGTGTTATACACTTAATTATAC E K T V Y T H A K T Y I F V L Y T - L Y R K L Y I H M Q K H I S S C Y T L N Y T R E N C I Y T C K N I Y L R V I H L I I . . . . . . 10300 AATTTACAAATATTTTACTTCAATTCAATTGTAGACAAATGCAAATTTTATACAAATATT N L Q I F Y F N S I V D K C K F Y T N I I Y K Y F T S I Q L - T N A N F I Q I L Q F T N I L L Q F N C R Q M Q I L Y K Y . . . . . . 10240 GCAGCGAAAAAGGCGAACGAATTATACAATTGCAGTGAAATACAATTTTCTCTTGCTTTA A A K K A N E L Y N C S E I Q F S L A L Q R K R R T N Y T I A V K Y N F L L L Y C S E K G E R I I Q L Q - N T I F S C F . . . . . . 10180 TACAACAGAAGTGTATAAATTGTGTTTATGTTTTTGTATAAAGCGAGAGAAAAACATATA Y N R S V - I V F M F L Y K A R E K H I T T E V Y K L C L C F C I K R E K N I Y I Q Q K C I N C V Y V F V - S E R K T Y . . . . . 10120 TTTTTTTCCTATACACTTATAATTATGCAATATACATACATTTTA F F S Y T L I I M Q Y T Y I L F F P I H L - L C N I H T F I F F L Y T Y N Y A I Y I H F Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-6 (+strand): . . . . . . 10076 TAAAATGTATGTATATTGCATAATTATAAGTGTATAGGAAAAAAATATATGTTTTTCTCT - N V C I L H N Y K C I G K K Y M F F S K M Y V Y C I I I S V - E K N I C F S L K C M Y I A - L - V Y R K K I Y V F L . . . . . . 10136 CGCTTTATACAAAAACATAAACACAATTTATACACTTCTGTTGTATAAAGCAAGAGAAAA R F I Q K H K H N L Y T S V V - S K R K A L Y K N I N T I Y T L L L Y K A R E N S L Y T K T - T Q F I H F C C I K Q E K . . . . . . 10196 TTGTATTTCACTGCAATTGTATAATTCGTTCGCCTTTTTCGCTGCAATATTTGTATAAAA L Y F T A I V - F V R L F R C N I C I K C I S L Q L Y N S F A F F A A I F V - N I V F H C N C I I R S P F S L Q Y L Y K . . . . . . 10256 TTTGCATTTGTCTACAATTGAATTGAAGTAAAATATTTGTAAATTGTATAATTAAGTGTA F A F V Y N - I E V K Y L - I V - L S V L H L S T I E L K - N I C K L Y N - V Y I C I C L Q L N - S K I F V N C I I K C . . . . . . 10316 TAACACGAAGATATATGTTTTTGCATGTGTATATACAGTTTTCTCTCGCTTATACAAAAC - H E D I C F C M C I Y S F L S L I Q N N T K I Y V F A C V Y T V F S R L Y K T I T R R Y M F L H V Y I Q F S L A Y T K . . . . . 10376 AGAAACACAATTTATACACTTTTGTGTATAAAGAGAGAGAGGCGA R N T I Y T L L C I K R E R R E T Q F I H F C V - R E R G Q K H N L Y T F V Y K E R E A Maximal non-overlapping open reading frames (>= 64 codons): none AGS-7 (10524 10410,10236 10128) SCR (e 0.887 d 0.000 a 0.958,e 0.679) Exon 1 10524 10410 ( 115 n); score: 0.887 Intron 1 10409 10237 ( 173 n); Pd: 0.000 Pa: 0.958 Exon 2 10236 10128 ( 109 n); score: 0.679 PGS (10524 10410,10236 10128) SGN-E392605+ 3-phase translation of AGS-7 (-strand): . . . . . . 10524 TGGGATAATTGTATATAATAGCAAACTAATAACCTAAAATAAATGGAGTAGCTATGATTT W D N C I - - Q T N N L K - M E - L - F G I I V Y N S K L I T - N K W S S Y D L G - L Y I I A N - - P K I N G V A M I . . . . . . : 10464 GATTTAATTGTGCACCATAGCAAACGTTAGCCAAAGTTTGTCAGTCGCCTCTCTC : CGAAA D L I V H H S K R - P K F V S R L S : P K I - L C T I A N V S Q S L S V A S L : R K - F N C A P - Q T L A K V C Q S P L S : E . . . . . . 10231 AAGGCGAACGAATTATACAATTGCAGTGAAATACAATTTTCTCTTGCTTTATACAACAGA K A N E L Y N C S E I Q F S L A L Y N R R R T N Y T I A V K Y N F L L L Y T T E K G E R I I Q L Q - N T I F S C F I Q Q . . . . . 10171 AGTGTATAAATTGTGTTTATGTTTTTGTATAAAGCGAGAGAAAA S V - I V F M F L Y K A R E V Y K L C L C F C I K R E K K C I N C V Y V F V - S E R K Maximal non-overlapping open reading frames (>= 64 codons): none PGL 4 (- strand): 12131 11071 AGS-1 (12131 11258,11091 11071) SCR (e 0.999 d 0.000 a 0.000,e 0.810) Exon 1 12131 11258 ( 874 n); score: 0.999 Intron 1 11257 11092 ( 166 n); Pd: 0.000 Pa: 0.000 Exon 2 11091 11071 ( 21 n); score: 0.810 PGS (11734 11258,11091 11071) SGN-E349779+ PGS (11988 11258) SGN-E355282+ PGS (12066 11271) SGN-E540205- PGS (11929 11271) SGN-E302617- PGS (11845 11271) SGN-E349926+ PGS (11842 11271) SGN-E295156+ PGS (11826 11271) SGN-E357558+ PGS (11826 11271) SGN-E357673+ PGS (11823 11271) SGN-E353160+ PGS (11823 11271) SGN-E355505+ PGS (11802 11271) SGN-E355527+ PGS (11796 11271) SGN-E351103+ PGS (11796 11271) SGN-E357512+ PGS (11793 11271) SGN-E350942+ PGS (11784 11271) SGN-E351796+ PGS (11598 11271) SGN-E310110+ PGS (11584 11271) SGN-E350856+ PGS (11758 11272) SGN-E295085- PGS (11826 11280) SGN-E354307+ PGS (11956 11285) SGN-E352685+ PGS (12104 11318) SGN-E340366+ PGS (11755 11327) SGN-E351033+ PGS (11755 11327) SGN-E356290+ PGS (11565 11327) SGN-E357088+ PGS (11532 11327) SGN-E353933+ PGS (11922 11328) SGN-E538599+ PGS (11907 11328) SGN-E353136+ PGS (11868 11328) SGN-E276802+ PGS (11846 11328) SGN-E357805+ PGS (11825 11328) SGN-E357453+ PGS (11817 11328) SGN-E353799+ PGS (11801 11328) SGN-E263405- PGS (11787 11328) SGN-E213028- PGS (11697 11328) SGN-E356548+ PGS (11664 11328) SGN-E276361- PGS (11627 11328) SGN-E261117- PGS (11942 11330) SGN-E210719+ PGS (11942 11330) SGN-E210726+ PGS (11910 11330) SGN-E538598- PGS (11868 11330) SGN-E274671+ PGS (11853 11330) SGN-E398465+ PGS (11809 11330) SGN-E390304- PGS (11801 11330) SGN-E213158- PGS (11794 11330) SGN-E274599+ PGS (11766 11330) SGN-E375346- PGS (11727 11330) SGN-E254748+ PGS (11712 11330) SGN-E214114+ PGS (11664 11330) SGN-E298580- PGS (11594 11330) SGN-E349554+ PGS (11544 11330) SGN-E351888+ PGS (11544 11330) SGN-E351415+ PGS (11544 11330) SGN-E352177+ PGS (11544 11330) SGN-E351985+ PGS (11972 11337) SGN-E210944+ PGS (11964 11337) SGN-E375347+ PGS (11934 11337) SGN-E268624+ PGS (11832 11337) SGN-E206119+ PGS (11796 11337) SGN-E255494+ PGS (11997 11383) SGN-E350897+ PGS (12118 11384) SGN-E260562+ PGS (12104 11384) SGN-E210798+ PGS (12093 11384) SGN-E263607+ PGS (12063 11384) SGN-E214128+ PGS (12060 11384) SGN-E263617+ PGS (12057 11384) SGN-E212205+ PGS (12042 11384) SGN-E213837+ PGS (11952 11384) SGN-E212616+ PGS (11880 11384) SGN-E252885+ PGS (11853 11384) SGN-E209133+ PGS (11781 11384) SGN-E350782+ PGS (11729 11384) SGN-E260107+ PGS (12104 11387) SGN-E210966+ PGS (12030 11387) SGN-E258673+ PGS (11964 11388) SGN-E211610+ PGS (12104 11402) SGN-E213606+ PGS (12058 11406) SGN-E213536+ PGS (12049 11408) SGN-E213897+ PGS (12118 11413) SGN-E212978+ PGS (11871 11418) SGN-E291342+ PGS (12032 11424) SGN-E212860+ PGS (11958 11424) SGN-E357015+ PGS (11933 11424) SGN-E357685+ PGS (11931 11424) SGN-E548946- PGS (11925 11424) SGN-E357464+ PGS (11901 11424) SGN-E350938+ PGS (11871 11424) SGN-E373166+ PGS (11844 11424) SGN-E551414+ PGS (11793 11424) SGN-E353171+ PGS (11793 11424) SGN-E308347+ PGS (11748 11424) SGN-E353161+ PGS (11748 11424) SGN-E354792+ PGS (11691 11424) SGN-E206137- PGS (11690 11424) SGN-E351855+ PGS (11684 11424) SGN-E351304+ PGS (12104 11425) SGN-E212433+ PGS (12045 11425) SGN-E542649+ PGS (11937 11425) SGN-E295872+ PGS (11925 11425) SGN-E351866+ PGS (11875 11425) SGN-E373165- PGS (11871 11433) SGN-E208399+ PGS (11871 11433) SGN-E292854+ PGS (11982 11434) SGN-E256630+ PGS (11656 11436) SGN-E337179+ PGS (11964 11454) SGN-E204787+ PGS (11952 11454) SGN-E200099+ PGS (11868 11454) SGN-E275197+ PGS (12051 11455) SGN-E253886+ PGS (11860 11455) SGN-E206043+ PGS (11781 11455) SGN-E207626+ PGS (12053 11456) SGN-E253452+ PGS (12100 11459) SGN-E276677+ PGS (12100 11459) SGN-E209968+ PGS (12051 11459) SGN-E254383+ PGS (12064 11464) SGN-E303865+ PGS (12118 11473) SGN-E294134+ PGS (12104 11473) SGN-E302616+ PGS (12104 11473) SGN-E251623+ PGS (12083 11473) SGN-E256710+ PGS (12131 11474) SGN-E214263+ PGS (12118 11474) SGN-E211803+ PGS (12109 11474) SGN-E211072+ PGS (12104 11474) SGN-E213091+ PGS (12090 11474) SGN-E211417+ PGS (11937 11474) SGN-E201711+ PGS (12113 11475) SGN-E335205+ PGS (12124 11477) SGN-E305774+ PGS (12118 11477) SGN-E212383+ PGS (12070 11477) SGN-E303485+ PGS (12108 11480) SGN-E276027+ PGS (12103 11480) SGN-E307742+ PGS (12083 11480) SGN-E255554+ PGS (11902 11480) SGN-E203547+ PGS (11846 11480) SGN-E301453+ PGS (11954 11491) SGN-E354546+ PGS (11880 11493) SGN-E206738+ PGS (12124 11510) SGN-E209843+ PGS (12042 11515) SGN-E336261+ PGS (11797 11515) SGN-E258498+ PGS (11779 11516) SGN-E251433+ PGS (12099 11519) SGN-E211899+ PGS (12124 11534) SGN-E207039+ PGS (12118 11558) SGN-E273742+ PGS (12116 11566) SGN-E210488+ PGS (12103 11566) SGN-E206152+ PGS (12108 11575) SGN-E288509+ PGS (12109 11576) SGN-E275948+ PGS (12030 11576) SGN-E253792+ PGS (12050 11578) SGN-E334899+ PGS (12119 11579) SGN-E215146+ PGS (12108 11579) SGN-E206874+ PGS (12100 11579) SGN-E208900+ PGS (12077 11579) SGN-E335641+ PGS (12069 11579) SGN-E209439+ PGS (12058 11579) SGN-E311822+ PGS (12017 11579) SGN-E208167+ PGS (11988 11579) SGN-E273584+ PGS (12118 11585) SGN-E250262+ PGS (12100 11586) SGN-E274937+ PGS (11972 11586) SGN-E205109+ PGS (12117 11588) SGN-E275676+ PGS (12108 11588) SGN-E274932+ PGS (12093 11588) SGN-E252003+ PGS (12003 11588) SGN-E204875+ PGS (11853 11588) SGN-E209055+ PGS (12057 11592) SGN-E266663+ PGS (12118 11595) SGN-E246947+ PGS (11947 11598) SGN-E275799+ PGS (12119 11603) SGN-E214938+ PGS (12058 11603) SGN-E203662+ PGS (12100 11612) SGN-E204618+ PGS (12078 11612) SGN-E202224+ PGS (12049 11614) SGN-E206535+ PGS (12115 11615) SGN-E274566+ PGS (12100 11615) SGN-E209259+ PGS (12129 11617) SGN-E207077+ PGS (12109 11618) SGN-E205594+ PGS (12070 11618) SGN-E205290+ PGS (12093 11621) SGN-E250954+ PGS (12030 11640) SGN-E201143+ PGS (12131 11641) SGN-E205046+ PGS (12118 11642) SGN-E202164+ PGS (12104 11642) SGN-E264072+ PGS (12128 11652) SGN-E202521+ PGS (12099 11653) SGN-E203940+ PGS (12078 11661) SGN-E205056+ PGS (12049 11661) SGN-E207079+ PGS (12128 11662) SGN-E208115+ PGS (12118 11662) SGN-E205100+ PGS (12118 11675) SGN-E208277+ PGS (12099 11675) SGN-E276456+ PGS (12120 11678) SGN-E200871+ PGS (12108 11678) SGN-E200039+ PGS (12104 11678) SGN-E210426+ PGS (12094 11678) SGN-E338892+ PGS (12104 11679) SGN-E256174+ PGS (12086 11679) SGN-E208827+ PGS (12118 11690) SGN-E207769+ PGS (12105 11690) SGN-E201442+ PGS (12098 11690) SGN-E336913+ PGS (12049 11707) SGN-E200631+ PGS (12105 11711) SGN-E204939+ PGS (12100 11714) SGN-E210135+ PGS (12063 11716) SGN-E278209+ PGS (11990 11726) SGN-E210564+ PGS (12116 11735) SGN-E338707+ PGS (12113 11735) SGN-E337746+ PGS (12094 11737) SGN-E336810+ PGS (12104 11743) SGN-E200826+ PGS (12104 11792) SGN-E205710+ PGS (12104 11807) SGN-E205598+ PGS (12105 11810) SGN-E209515+ PGS (12104 11816) SGN-E249666+ PGS (12119 11831) SGN-E390089+ PGS (12028 11833) SGN-E335140+ PGS (12096 11843) SGN-E264435+ PGS (12059 11867) SGN-E335797+ PGS (12118 11870) SGN-E255362+ PGS (12108 11889) SGN-E200076+ 3-phase translation of AGS-1 (-strand): . . . . . . 12131 AAAATAGTTCCACAAACATGGCCTACTTGAGATCTTCTTTTGTTTTCTTCCTTCTTGCTT K I V P Q T W P T - D L L L F S S F L L K - F H K H G L L E I F F C F L P S C F N S S T N M A Y L R S S F V F F L L A . . . . . . 12071 TTGTGACTTACACTTATGCTGCCACTTTCGAGGTACGCAACAACTGTCCATACACCGTCT L - L T L M L P L S R Y A T T V H T P S C D L H L C C H F R G T Q Q L S I H R L F V T Y T Y A A T F E V R N N C P Y T V . . . . . . 12011 GGGCGGCGTCGACCCCAATAGGCGGTGGTCGACGTCTTGATCGAGGCCAAACATGGGTCA G R R R P Q - A V V D V L I E A K H G S G G V D P N R R W S T S - S R P N M G H W A A S T P I G G G R R L D R G Q T W V . . . . . . 11951 TCAATGCACCGAGGGGCACTAAGATGGCACGTATATGGGGTCGTACGAATTGCAACTTTG S M H R G A L R W H V Y G V V R I A T L Q C T E G H - D G T Y M G S Y E L Q L - I N A P R G T K M A R I W G R T N C N F . . . . . . 11891 ATGGTGCTGGTAGAGGTTCATGTCAGACTGGTGATTGTGGTGGGGTCTTGCAATGTACCG M V L V E V H V R L V I V V G S C N V P W C W - R F M S D W - L W W G L A M Y R D G A G R G S C Q T G D C G G V L Q C T . . . . . . 11831 GGTGGGGCAAACCACCAAACACCCTGGCCGAGTACGCCTTGGACCAGTTTAGCAACCTAG G G A N H Q T P W P S T P W T S L A T - V G Q T T K H P G R V R L G P V - Q P R G W G K P P N T L A E Y A L D Q F S N L . . . . . . 11771 ATTTCTGGGACATTTCTTTAGTCGATGGATTTAATATTCCAATGACTTTCGCCCCGACCA I S G T F L - S M D L I F Q - L S P R P F L G H F F S R W I - Y S N D F R P D Q D F W D I S L V D G F N I P M T F A P T . . . . . . 11711 ATCCTAGTGGAGGGAAATGCCATGCAATTCATTGTACGGCTAATATAAATGGTGAATGTC I L V E G N A M Q F I V R L I - M V N V S - W R E M P C N S L Y G - Y K W - M S N P S G G K C H A I H C T A N I N G E C . . . . . . 11651 CTGGTTCACTTAGGGTACCCGGAGGATGTAACAATCCTTGTACCACGTTCGGAGGACAAC L V H L G Y P E D V T I L V P R S E D N W F T - G T R R M - Q S L Y H V R R T T P G S L R V P G G C N N P C T T F G G Q . . . . . . 11591 AATATTGTTGCACACAAGGTCCATGTGGCCCTACTGATTTGTCGAGATTTTTCAAACAAA N I V A H K V H V A L L I C R D F S N K I L L H T R S M W P Y - F V E I F Q T K Q Y C C T Q G P C G P T D L S R F F K Q . . . . . . 11531 GATGTCCTGATGCGTATAGCTACCCACAAGATGATCCTACTAGCACATTTACTTGCCCTA D V L M R I A T H K M I L L A H L L A L M S - C V - L P T R - S Y - H I Y L P - R C P D A Y S Y P Q D D P T S T F T C P . . . . . . 11471 GTGGTAGTACAAATTATAGGGTTGTTTTTTGTCCTAATGGTGTTACTAGCCCAAATTTCC V V V Q I I G L F F V L M V L L A Q I S W - Y K L - G C F L S - W C Y - P K F P S G S T N Y R V V F C P N G V T S P N F . . . . . . 11411 CCTTGGAGATGCCCTCAAGTGATGAAGAGGCTAAGTAAAATTGAGTCACTTTCTTTTAAA P W R C P Q V M K R L S K I E S L S F K L G D A L K - - R G - V K L S H F L L N P L E M P S S D E E A K - N - V T F F - . . . . . . 11351 TTGCTTGAAGTAGTCGAGTTATATAATTGGCTTGTAATAAACCTAATATAATTACATGAA L L E V V E L Y N W L V I N L I - L H E C L K - S S Y I I G L - - T - Y N Y M N I A - S S R V I - L A C N K P N I I T - . . . . : . . 11291 TAAAAGTCACATCATCACAAATATGTTGTTTCGA : AAAATATAAAAATAAAATAAA - K S H H H K Y V V S : K N I K I K - K S H I I T N M L F R : K I - K - N K I K V T S S Q I C C F E : K Y K N K I Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1-_PGL-4_AGS-1_PPS_1 (12129 11374) (frame '0'; 753 bp, 251 residues) 1 NSSTNMAYLR SSFVFFLLAF VTYTYAATFE VRNNCPYTVW AASTPIGGGR RLDRGQTWVI 61 NAPRGTKMAR IWGRTNCNFD GAGRGSCQTG DCGGVLQCTG WGKPPNTLAE YALDQFSNLD 121 FWDISLVDGF NIPMTFAPTN PSGGKCHAIH CTANINGECP GSLRVPGGCN NPCTTFGGQQ 181 YCCTQGPCGP TDLSRFFKQR CPDAYSYPQD DPTSTFTCPS GSTNYRVVFC PNGVTSPNFP 241 LEMPSSDEEA K- AGS-2 (11704 11218) SCR (e 0.994) Exon 1 11704 11218 ( 487 n); score: 0.994 PGS (11704 11218) SGN-E299150+ 3-phase translation of AGS-2 (-strand): . . . . . . 11704 TGGAGGGAAATGCCATGCAATTCATTGTACGGCTAATATAAATGGTGAATGTCCTGGTTC W R E M P C N S L Y G - Y K W - M S W F G G K C H A I H C T A N I N G E C P G S E G N A M Q F I V R L I - M V N V L V . . . . . . 11644 ACTTAGGGTACCCGGAGGATGTAACAATCCTTGTACCACGTTCGGAGGACAACAATATTG T - G T R R M - Q S L Y H V R R T T I L L R V P G G C N N P C T T F G G Q Q Y C H L G Y P E D V T I L V P R S E D N N I . . . . . . 11584 TTGCACACAAGGTCCATGTGGCCCTACTGATTTGTCGAGATTTTTCAAACAAAGATGTCC L H T R S M W P Y - F V E I F Q T K M S C T Q G P C G P T D L S R F F K Q R C P V A H K V H V A L L I C R D F S N K D V . . . . . . 11524 TGATGCGTATAGCTACCCACAAGATGATCCTACTAGCACATTTACTTGCCCTAGTGGTAG - C V - L P T R - S Y - H I Y L P - W - D A Y S Y P Q D D P T S T F T C P S G S L M R I A T H K M I L L A H L L A L V V . . . . . . 11464 TACAAATTATAGGGTTGTTTTTTGTCCTAATGGTGTTACTAGCCCAAATTTCCCCTTGGA Y K L - G C F L S - W C Y - P K F P L G T N Y R V V F C P N G V T S P N F P L E V Q I I G L F F V L M V L L A Q I S P W . . . . . . 11404 GATGCCCTCAAGTGATGAAGAGGCTAAGTAAAATTGAGTCACTTTCTTTTAAATTGCTTG D A L K - - R G - V K L S H F L L N C L M P S S D E E A K - N - V T F F - I A - R C P Q V M K R L S K I E S L S F K L L . . . . . . 11344 AAGTAGTCGAGTTATATAATTGGCTTGTAATAAACCTAATATAATTACATGAATAAAAGT K - S S Y I I G L - - T - Y N Y M N K S S S R V I - L A C N K P N I I T - I K V E V V E L Y N W L V I N L I - L H E - K . . . . . . 11284 CACATCATCACAAATATGTTGTTTCGAATATTATTTTATGTATATTTTGTTATTTACGTA H I I T N M L F R I L F Y V Y F V I Y V T S S Q I C C F E Y Y F M Y I L L F T Y S H H H K Y V V S N I I L C I F C Y L R . 11224 TTAACTT L T - L I N Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1-_PGL-4_AGS-2_PPS_1 (11663 11301) (frame '0'; 360 bp, 120 residues) 1 MVNVLVHLGY PEDVTILVPR SEDNNIVAHK VHVALLICRD FSNKDVLMRI ATHKMILLAH 61 LLALVVVQII GLFFVLMVLL AQISPWRCPQ VMKRLSKIES LSFKLLEVVE LYNWLVINLI 121 - 3-phase translation of AGS-2 (+strand): . . . . . . 11218 AAGTTAATACGTAAATAACAAAATATACATAAAATAATATTCGAAACAACATATTTGTGA K L I R K - Q N I H K I I F E T T Y L - S - Y V N N K I Y I K - Y S K Q H I C D V N T - I T K Y T - N N I R N N I F V . . . . . . 11278 TGATGTGACTTTTATTCATGTAATTATATTAGGTTTATTACAAGCCAATTATATAACTCG - C D F Y S C N Y I R F I T S Q L Y N S D V T F I H V I I L G L L Q A N Y I T R M M - L L F M - L Y - V Y Y K P I I - L . . . . . . 11338 ACTACTTCAAGCAATTTAAAAGAAAGTGACTCAATTTTACTTAGCCTCTTCATCACTTGA T T S S N L K E S D S I L L S L F I T - L L Q A I - K K V T Q F Y L A S S S L E D Y F K Q F K R K - L N F T - P L H H L . . . . . . 11398 GGGCATCTCCAAGGGGAAATTTGGGCTAGTAACACCATTAGGACAAAAAACAACCCTATA G H L Q G E I W A S N T I R T K N N P I G I S K G K F G L V T P L G Q K T T L - R A S P R G N L G - - H H - D K K Q P Y . . . . . . 11458 ATTTGTACTACCACTAGGGCAAGTAAATGTGCTAGTAGGATCATCTTGTGGGTAGCTATA I C T T T R A S K C A S R I I L W V A I F V L P L G Q V N V L V G S S C G - L Y N L Y Y H - G K - M C - - D H L V G S Y . . . . . . 11518 CGCATCAGGACATCTTTGTTTGAAAAATCTCGACAAATCAGTAGGGCCACATGGACCTTG R I R T S L F E K S R Q I S R A T W T L A S G H L C L K N L D K S V G P H G P C T H Q D I F V - K I S T N Q - G H M D L . . . . . . 11578 TGTGCAACAATATTGTTGTCCTCCGAACGTGGTACAAGGATTGTTACATCCTCCGGGTAC C A T I L L S S E R G T R I V T S S G Y V Q Q Y C C P P N V V Q G L L H P P G T V C N N I V V L R T W Y K D C Y I L R V . . . . . . 11638 CCTAAGTGAACCAGGACATTCACCATTTATATTAGCCGTACAATGAATTGCATGGCATTT P K - T R T F T I Y I S R T M N C M A F L S E P G H S P F I L A V Q - I A W H F P - V N Q D I H H L Y - P Y N E L H G I . 11698 CCCTCCA P S P P S L Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1+_PGL-4_AGS-2_PPS_1 (11398 11646) (frame '1'; 246 bp, 82 residues) 1 GHLQGEIWAS NTIRTKNNPI ICTTTRASKC ASRIILWVAI RIRTSLFEKS RQISRATWTL 61 CATILLSSER GTRIVTSSGY PK- PGL 5 (+ strand): 11425 11851 AGS-1 (11425 11851) SCR (e 0.803) Exon 1 11425 11851 ( 427 n); score: 0.803 PGS (11425 11851) SGN-E352998- 3-phase translation of AGS-1 (+strand): . . . . . . 11425 AGTAACACCATTAGGACAAAAAACAACCCTATAATTTGTACTACCACTAGGGCAAGTAAA S N T I R T K N N P I I C T T T R A S K V T P L G Q K T T L - F V L P L G Q V N - H H - D K K Q P Y N L Y Y H - G K - . . . . . . 11485 TGTGCTAGTAGGATCATCTTGTGGGTAGCTATACGCATCAGGACATCTTTGTTTGAAAAA C A S R I I L W V A I R I R T S L F E K V L V G S S C G - L Y A S G H L C L K N M C - - D H L V G S Y T H Q D I F V - K . . . . . . 11545 TCTCGACAAATCAGTAGGGCCACATGGACCTTGTGTGCAACAATATTGTTGTCCTCCGAA S R Q I S R A T W T L C A T I L L S S E L D K S V G P H G P C V Q Q Y C C P P N I S T N Q - G H M D L V C N N I V V L R . . . . . . 11605 CGTGGTACAAGGATTGTTACATCCTCCGGGTACCCTAAGTGAACCAGGACATTCACCATT R G T R I V T S S G Y P K - T R T F T I V V Q G L L H P P G T L S E P G H S P F T W Y K D C Y I L R V P - V N Q D I H H . . . . . . 11665 TATATTAGCCGTACAATGAATTGCATGGCATTTCCCTCCACTAGGATTGGTCGGGGCGAA Y I S R T M N C M A F P S T R I G R G E I L A V Q - I A W H F P P L G L V G A K L Y - P Y N E L H G I S L H - D W S G R . . . . . . 11725 AGTCATTGGAATATTAAATCCATCGACTAAAGAAATGTCCCAGAAATCTAGGTTGCTAAA S H W N I K S I D - R N V P E I - V A K V I G I L N P S T K E M S Q K S R L L N K S L E Y - I H R L K K C P R N L G C - . . . . . . 11785 CTGGTCCAAGGCGTACTCGGCCAGGGTGTTTGGTGGTTTGCCCCACCCGGTACATTGCAA L V Q G V L G Q G V W W F A P P G T L Q W S K A Y S A R V F G G L P H P V H C K T G P R R T R P G C L V V C P T R Y I A . 11845 GACCCCA D P T P R P Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1+_PGL-5_AGS-1_PPS_1 (11425 11646) (frame '1'; 219 bp, 73 residues) 1 SNTIRTKNNP IICTTTRASK CASRIILWVA IRIRTSLFEK SRQISRATWT LCATILLSSE 61 RGTRIVTSSG YPK- 3-phase translation of AGS-1 (-strand): . . . . . . 11851 TGGGGTCTTGCAATGTACCGGGTGGGGCAAACCACCAAACACCCTGGCCGAGTACGCCTT W G L A M Y R V G Q T T K H P G R V R L G V L Q C T G W G K P P N T L A E Y A L G S C N V P G G A N H Q T P W P S T P . . . . . . 11791 GGACCAGTTTAGCAACCTAGATTTCTGGGACATTTCTTTAGTCGATGGATTTAATATTCC G P V - Q P R F L G H F F S R W I - Y S D Q F S N L D F W D I S L V D G F N I P W T S L A T - I S G T F L - S M D L I F . . . . . . 11731 AATGACTTTCGCCCCGACCAATCCTAGTGGAGGGAAATGCCATGCAATTCATTGTACGGC N D F R P D Q S - W R E M P C N S L Y G M T F A P T N P S G G K C H A I H C T A Q - L S P R P I L V E G N A M Q F I V R . . . . . . 11671 TAATATAAATGGTGAATGTCCTGGTTCACTTAGGGTACCCGGAGGATGTAACAATCCTTG - Y K W - M S W F T - G T R R M - Q S L N I N G E C P G S L R V P G G C N N P C L I - M V N V L V H L G Y P E D V T I L . . . . . . 11611 TACCACGTTCGGAGGACAACAATATTGTTGCACACAAGGTCCATGTGGCCCTACTGATTT Y H V R R T T I L L H T R S M W P Y - F T T F G G Q Q Y C C T Q G P C G P T D L V P R S E D N N I V A H K V H V A L L I . . . . . . 11551 GTCGAGATTTTTCAAACAAAGATGTCCTGATGCGTATAGCTACCCACAAGATGATCCTAC V E I F Q T K M S - C V - L P T R - S Y S R F F K Q R C P D A Y S Y P Q D D P T C R D F S N K D V L M R I A T H K M I L . . . . . . 11491 TAGCACATTTACTTGCCCTAGTGGTAGTACAAATTATAGGGTTGTTTTTTGTCCTAATGG - H I Y L P - W - Y K L - G C F L S - W S T F T C P S G S T N Y R V V F C P N G L A H L L A L V V V Q I I G L F F V L M . 11431 TGTTACT C Y V T V L Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1-_PGL-5_AGS-1_PPS_1 (11850 11425) (frame '2'; 426 bp, 142 residues) 1 GVLQCTGWGK PPNTLAEYAL DQFSNLDFWD ISLVDGFNIP MTFAPTNPSG GKCHAIHCTA 61 NINGECPGSL RVPGGCNNPC TTFGGQQYCC TQGPCGPTDL SRFFKQRCPD AYSYPQDDPT 121 STFTCPSGST NYRVVFCPNG VT PGL 6 (+ strand): 13447 17145 AGS-1 (13447 13493,14665 14721,15939 15987,16610 17145) SCR (e 0.723 d 0.000 a 0.000,e 0.579 d 0.935 a 0.000,e 0.582 d 0.000 a 0.764,e 0.777) Exon 1 13447 13493 ( 47 n); score: 0.723 Intron 1 13494 14664 (1171 n); Pd: 0.000 Pa: 0.000 Exon 2 14665 14721 ( 57 n); score: 0.579 Intron 2 14722 15938 (1217 n); Pd: 0.935 Pa: 0.000 Exon 3 15939 15987 ( 49 n); score: 0.582 Intron 3 15988 16609 ( 622 n); Pd: 0.000 Pa: 0.764 Exon 4 16610 17145 ( 536 n); score: 0.777 PGS (13447 13493,14665 14721,15939 15987,16610 16761) SGN-E270562+ PGS (16610 16984) SGN-E368629- PGS (16610 16984) SGN-E238551- PGS (16610 16817) SGN-E352844- PGS (16655 17145) SGN-E238621- PGS (16708 16984) SGN-E235901- 3-phase translation of AGS-1 (+strand): . . . . . : . 13447 TTCTAAAAGTTATTTTTTTTTTAAAAAAAAAGAACGATAATTCAAAT : TTTGTAACGTGAC F - K L F F F - K K R T I I Q I : L - R D S K S Y F F F K K K E R - F K : F C N V T L K V I F F L K K K N D N S N : F V T - . . . . . : . 14678 GGAACTTATTTCTCAAAATAAATATTATTTAAAAAAAAAAAACA : TATAAATAATTAGTTG G T Y F S K - I L F K K K K H : I N N - L E L I S Q N K Y Y L K K K N : I - I I S C R N L F L K I N I I - K K K T : Y K - L V . . . . : . . 15955 TATTTTTTTTTTATAAATTATAGGTGTGACAAA : ATAGTGACATTTGTTTTATCGAAAAAG Y F F F I N Y R C D K : I V T F V L S K K I F F L - I I G V T K : - - H L F Y R K R V F F F Y K L - V - Q : N S D I C F I E K . . . . . . 16637 GGTGGTGATTTTCGAAAAGAGTTTGTTTTTAGACTTTTAGGAGTCGCCACTTAATTTTTA G G D F R K E F V F R L L G V A T - F L V V I F E K S L F L D F - E S P L N F - G W - F S K R V C F - T F R S R H L I F . . . . . . 16697 AGAAAAATCAAGAAAACTTCGTTTCTAAACAACTTAAACAGAAAAAATTGTTTTGAAACA R K I K K T S F L N N L N R K N C F E T E K S R K L R F - T T - T E K I V L K H K K N Q E N F V S K Q L K Q K K L F - N . . . . . . 16757 TTTTAAGGGTTCGGGATTCCTATTAGTATCTTAGGAAGGTGTAAGGCACCCAAAACACTC F - G F G I P I S I L G R C K A P K T L F K G S G F L L V S - E G V R H P K H S I L R V R D S Y - Y L R K V - G T Q N T . . . . . . 16817 CGTTAACTTACGGTTTTCCAATGATTAACTATTTGATTATTTTTATTTTTAACCTTTGCA R - L T V F Q - L T I - L F L F L T F A V N L R F S N D - L F D Y F Y F - P L Q P L T Y G F P M I N Y L I I F I F N L C . . . . . . 16877 AATTTATTTGAACTTTTAACATGACTTACTTAGCCAAACTTAGCCAATTTTGAAATATTT N L F E L L T - L T - P N L A N F E I F I Y L N F - H D L L S Q T - P I L K Y L K F I - T F N M T Y L A K L S Q F - N I . . . . . . 16937 ATTGTTTATCTTGCCAGTTTACGAAACCATTTCAAAGTTAAGCTTACTCAAGGTTTTATC I V Y L A S L R N H F K V K L T Q G F I L F I L P V Y E T I S K L S L L K V L S Y C L S C Q F T K P F Q S - A Y S R F Y . . . . . . 16997 TAAACAAGCCTTACGAATTTGAAACAATTTATCATTTAGAAGTTAGTTTTAAAAATTTTT - T S L T N L K Q F I I - K L V L K I F K Q A L R I - N N L S F R S - F - K F L L N K P Y E F E T I Y H L E V S F K N F . . . . . . 17057 AGGTTTGATAAAATAACAGGCGTTCGATGAGGGTTTGGAGTTTCCTAATCCTAAGCTAAC R F D K I T G V R - G F G V S - S - A N G L I K - Q A F D E G L E F P N P K L T - V - - N N R R S M R V W S F L I L S - . . . 17117 GGCATTGAAAACAAAATAAGATAAGCAAA G I E N K I R - A A L K T K - D K Q R H - K Q N K I S K Maximal non-overlapping open reading frames (>= 64 codons): none AGS-2 (13456 14446) SCR (e 0.987) Exon 1 13456 14446 ( 991 n); score: 0.987 PGS (13456 14081) SGN-E375346+ PGS (13484 14223) SGN-E538598+ PGS (13484 14114) SGN-E213158+ PGS (13484 14107) SGN-E274599- PGS (13484 14040) SGN-E254748- PGS (13484 13878) SGN-E357088- PGS (13484 13845) SGN-E353933- PGS (13487 14220) SGN-E353136- PGS (13487 14159) SGN-E357805- PGS (13487 14068) SGN-E356290- PGS (13487 14068) SGN-E351033- PGS (13487 14027) SGN-E214114- PGS (13487 13907) SGN-E349554- PGS (13487 13857) SGN-E351415- PGS (13487 13857) SGN-E351888- PGS (13488 14181) SGN-E274671- PGS (13489 14122) SGN-E390304+ PGS (13489 13977) SGN-E298580+ PGS (13489 13857) SGN-E352177- PGS (13489 13857) SGN-E351985- PGS (13515 14235) SGN-E538599- PGS (13525 14114) SGN-E263405+ PGS (13525 14100) SGN-E213028+ PGS (13525 14012) SGN-E356548- PGS (13525 13977) SGN-E276361+ PGS (13527 14130) SGN-E353799- PGS (13530 14181) SGN-E276802- PGS (13530 13940) SGN-E261117+ PGS (13531 14255) SGN-E210719- PGS (13531 14138) SGN-E357453- PGS (13531 14136) SGN-E357325- PGS (13544 13738) SGN-E353478- PGS (13545 14255) SGN-E210726- PGS (13576 14288) SGN-E210944- PGS (13577 14248) SGN-E268624- PGS (13581 14277) SGN-E375347- PGS (13584 14109) SGN-E255494- PGS (13588 14145) SGN-E206119- PGS (13589 14167) SGN-E396772- PGS (13600 14311) SGN-E350897- PGS (13609 14094) SGN-E350782- PGS (13611 14265) SGN-E212616- PGS (13617 14370) SGN-E212205- PGS (13624 14373) SGN-E263617- PGS (13625 14431) SGN-E260562- PGS (13628 14194) SGN-E252885- PGS (13631 14166) SGN-E398465- PGS (13633 14417) SGN-E210798- PGS (13633 14358) SGN-E213837- PGS (13633 14166) SGN-E209133- PGS (13640 14379) SGN-E540205+ PGS (13640 14301) SGN-E355282- PGS (13640 14269) SGN-E352685- PGS (13640 14242) SGN-E302617+ PGS (13640 14151) SGN-E295156- PGS (13640 14139) SGN-E357673- PGS (13640 14139) SGN-E354307- PGS (13640 14139) SGN-E357558- PGS (13640 14136) SGN-E355505- PGS (13640 14115) SGN-E355527- PGS (13640 14109) SGN-E357512- PGS (13640 14109) SGN-E351103- PGS (13640 14106) SGN-E350942- PGS (13640 14097) SGN-E351796- PGS (13640 14071) SGN-E295085+ PGS (13640 14047) SGN-E349779- PGS (13640 13911) SGN-E310110- PGS (13640 13897) SGN-E350856- PGS (13647 14136) SGN-E353160- PGS (13661 14376) SGN-E214128- PGS (13697 14406) SGN-E263607- PGS (13697 14042) SGN-E260107- PGS (13698 14417) SGN-E210966- PGS (13699 14343) SGN-E258673- PGS (13701 14277) SGN-E211610- PGS (13713 14417) SGN-E340366- PGS (13715 14417) SGN-E213606- PGS (13719 14371) SGN-E213536- PGS (13721 14362) SGN-E213897- PGS (13726 14431) SGN-E212978- PGS (13735 14417) SGN-E212433- PGS (13738 14379) SGN-E305583- PGS (13747 14295) SGN-E256630- PGS (13767 14277) SGN-E204787- PGS (13767 14265) SGN-E200099- PGS (13767 14181) SGN-E275197- PGS (13768 14364) SGN-E253886- PGS (13768 14173) SGN-E206043- PGS (13768 14094) SGN-E207626- PGS (13769 14366) SGN-E253452- PGS (13770 14414) SGN-E276677- PGS (13770 14414) SGN-E209968- PGS (13770 14364) SGN-E254383- PGS (13777 14377) SGN-E303865- PGS (13783 14357) SGN-E301650- PGS (13786 14431) SGN-E294134- PGS (13786 14417) SGN-E302616- PGS (13786 14417) SGN-E251623- PGS (13786 14396) SGN-E256710- PGS (13787 14437) SGN-E214263- PGS (13787 14431) SGN-E211803- PGS (13787 14422) SGN-E211072- PGS (13787 14417) SGN-E213091- PGS (13787 14403) SGN-E211417- PGS (13787 14250) SGN-E201711- PGS (13788 14426) SGN-E335205- PGS (13790 14431) SGN-E212383- PGS (13790 14383) SGN-E303485- PGS (13791 14288) SGN-E201255- PGS (13793 14421) SGN-E276027- PGS (13793 14416) SGN-E307742- PGS (13793 14396) SGN-E255554- PGS (13793 14218) SGN-E203547- PGS (13793 14159) SGN-E301453- PGS (13805 14267) SGN-E354546- PGS (13806 14194) SGN-E206738- PGS (13828 14357) SGN-E336261- PGS (13828 14110) SGN-E258498- PGS (13829 14092) SGN-E251433- PGS (13830 14412) SGN-E211899- PGS (13868 14379) SGN-E306399- PGS (13871 14431) SGN-E273742- PGS (13879 14429) SGN-E210488- PGS (13879 14416) SGN-E206152- PGS (13888 14421) SGN-E288509- PGS (13889 14423) SGN-E275948- PGS (13889 14343) SGN-E253792- PGS (13890 14414) SGN-E208900- PGS (13891 14432) SGN-E215146- PGS (13891 14421) SGN-E206874- PGS (13891 14382) SGN-E209439- PGS (13891 14371) SGN-E311822- PGS (13891 14301) SGN-E273584- PGS (13892 14390) SGN-E335641- PGS (13892 14363) SGN-E334899- PGS (13898 14431) SGN-E250262- PGS (13899 14414) SGN-E274937- PGS (13899 14288) SGN-E205109- PGS (13901 14430) SGN-E275676- PGS (13901 14421) SGN-E274932- PGS (13901 14406) SGN-E252003- PGS (13901 14318) SGN-E204875- PGS (13901 14166) SGN-E209055- PGS (13905 14370) SGN-E266663- PGS (13908 14431) SGN-E246947- PGS (13911 14260) SGN-E275799- PGS (13915 14432) SGN-E214938- PGS (13915 14371) SGN-E203662- PGS (13925 14414) SGN-E204618- PGS (13925 14391) SGN-E202224- PGS (13927 14362) SGN-E206535- PGS (13928 14428) SGN-E274566- PGS (13928 14414) SGN-E209259- PGS (13930 14422) SGN-E205594- PGS (13930 14384) SGN-E205290- PGS (13931 14437) SGN-E207077- PGS (13934 14406) SGN-E250954- PGS (13953 14343) SGN-E201143- PGS (13954 14437) SGN-E205046- PGS (13955 14431) SGN-E202164- PGS (13955 14417) SGN-E264072- PGS (13965 14437) SGN-E202521- PGS (13966 14412) SGN-E203940- PGS (13974 14394) SGN-E205056- PGS (13974 14362) SGN-E207079- PGS (13975 14437) SGN-E208115- PGS (13975 14431) SGN-E205100- PGS (13988 14431) SGN-E208277- PGS (13988 14412) SGN-E276456- PGS (13989 14433) SGN-E200871- PGS (13989 14421) SGN-E200039- PGS (13989 14417) SGN-E210426- PGS (13989 14407) SGN-E338892- PGS (13992 14417) SGN-E256174- PGS (13992 14401) SGN-E208827- PGS (14001 14431) SGN-E207769- PGS (14001 14418) SGN-E201442- PGS (14002 14411) SGN-E336913- PGS (14020 14362) SGN-E200631- PGS (14024 14418) SGN-E204939- PGS (14025 14414) SGN-E210135- PGS (14030 14376) SGN-E278209- PGS (14039 14303) SGN-E210564- PGS (14048 14426) SGN-E337746- PGS (14048 14425) SGN-E338707- PGS (14050 14407) SGN-E336810- PGS (14056 14417) SGN-E200826- PGS (14105 14417) SGN-E205710- PGS (14119 14417) SGN-E205598- PGS (14123 14418) SGN-E209515- PGS (14129 14417) SGN-E249666- PGS (14142 14432) SGN-E390089- PGS (14146 14341) SGN-E335140- PGS (14155 14409) SGN-E264435- PGS (14174 14431) SGN-E263895- PGS (14180 14372) SGN-E335797- PGS (14183 14427) SGN-E255362- PGS (14201 14421) SGN-E200076- PGS (14335 14446) SGN-E537407- PGS (14366 14427) SGN-E253853- 3-phase translation of AGS-2 (+strand): . . . . . . 13456 TTATTTTTTTTTTAAAAAAAAAGAACGATAATTCAAATGCACTGTTGTTTTATACATCTA L F F F - K K R T I I Q M H C C F I H L Y F F F K K K E R - F K C T V V L Y I - I F F L K K K N D N S N A L L F Y T S . . . . . . 13516 AGACAAAAGTACACATGAGATGTAACTCTTATTCCGGTCTTTAAGTTTGTTACGAACTCT R Q K Y T - D V T L I P V F K F V T N S D K S T H E M - L L F R S L S L L R T L K T K V H M R C N S Y S G L - V C Y E L . . . . . . 13576 TATCAATAAAGTAAAAGTGAATATTTAAAAAACTGAGCTATTAAGATTTTTCATTACGGT Y Q - S K S E Y L K N - A I K I F H Y G I N K V K V N I - K T E L L R F F I T V L S I K - K - I F K K L S Y - D F S L R . . . . . . 13636 AGAGATCAGTTGACTAATTGAGGCGATTTAAAATGAAGAAACTCAAATTCACTTGGCCAC R D Q L T N - G D L K - R N S N S L G H E I S - L I E A I - N E E T Q I H L A T - R S V D - L R R F K M K K L K F T W P . . . . . . 13696 TTCATCAGTACTTGCAGGCATCTCCAAGGGGAAATTTGGATCAGCAACACCATTAGGACA F I S T C R H L Q G E I W I S N T I R T S S V L A G I S K G K F G S A T P L G Q L H Q Y L Q A S P R G N L D Q Q H H - D . . . . . . 13756 AAAGACAACCCTATAGTTTGTACTACCACCAGGGCAAGTAAATGTGCTTGTAGGATCGTC K D N P I V C T T T R A S K C A C R I V K T T L - F V L P P G Q V N V L V G S S K R Q P Y S L Y Y H Q G K - M C L - D R . . . . . . 13816 TTGTGGGTAGCTATAAGCATCGGGACATCTTTTCTTGAAAAATTTGGACAACTCTGTAGG L W V A I S I G T S F L E K F G Q L C R C G - L - A S G H L F L K N L D N S V G L V G S Y K H R D I F S - K I W T T L - . . . . . . 13876 GCCACATGGACCTTGGGTGCAACAATATTGTTGTCCTCCAAACGTGGTACAAGGGTTGTT A T W T L G A T I L L S S K R G T R V V P H G P W V Q Q Y C C P P N V V Q G L L G H M D L G C N N I V V L Q T W Y K G C . . . . . . 13936 ACATCCTCCAGGTACCTTAAGGGCGCGAGGACATTCACCATTTATATTGGCCGTGCAATG T S S R Y L K G A R T F T I Y I G R A M H P P G T L R A R G H S P F I L A V Q - Y I L Q V P - G R E D I H H L Y W P C N . . . . . . 13996 AATTGCGTGACATTTTCCTCCACTAGGTTTTGTTGGGGCAAAAGTCATTGGAATATTAAA N C V T F S S T R F C W G K S H W N I K I A - H F P P L G F V G A K V I G I L N E L R D I F L H - V L L G Q K S L E Y - . . . . . . 14056 TCCATCGACTAAAGAAATGTCCCAAAAATCTAAGTTGCTAAACTGGTCCAAGGCGTACTC S I D - R N V P K I - V A K L V Q G V L P S T K E M S Q K S K L L N W S K A Y S I H R L K K C P K N L S C - T G P R R T . . . . . . 14116 GGCTAGGGTGTTTGGGGGTTTGCCCCATCCGGTACACTGTAAGACTCCACCACAATCACC G - G V W G F A P S G T L - D S T T I T A R V F G G L P H P V H C K T P P Q S P R L G C L G V C P I R Y T V R L H H N H . . . . . . 14176 AGTCTGACATGTACCTCTGCCTGCAGCATTAAAGTTGCAACCAGTACGACCCCATATACG S L T C T S A C S I K V A T S T T P Y T V - H V P L P A A L K L Q P V R P H I R Q S D M Y L C L Q H - S C N Q Y D P I Y . . . . . . 14236 TGCCATCTTAGTTCCCCTCGGAGCATTGATGACCCATGTTTGGCCTCGATTGAGACGTCG C H L S S P R S I D D P C L A S I E T S A I L V P L G A L M T H V W P R L R R R V P S - F P S E H - - P M F G L D - D V . . . . . . 14296 ACCACCGCCTATCGGAGTCGATGCCGCCCAAACGGTGTATGGACAGTTGTTGCGTACCTC T T A Y R S R C R P N G V W T V V A Y L P P P I G V D A A Q T V Y G Q L L R T S D H R L S E S M P P K R C M D S C C V P . . . . . . 14356 AATAGTGGCAGCATAAGTATAAGTCACACAAAGAAGGAAGAAGAGAACAAAAGAAGATGT N S G S I S I S H T K K E E E N K R R C I V A A - V - V T Q R R K K R T K E D V Q - W Q H K Y K S H K E G R R E Q K K M . . . . 14416 CAAGTAGCCCATGTTTGTTGAAATGTATATA Q V A H V C - N V Y K - P M F V E M Y I S S S P C L L K C I Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1+_PGL-6_AGS-2_PPS_1 (13672 14067) (frame '1'; 393 bp, 131 residues) 1 RNSNSLGHFI STCRHLQGEI WISNTIRTKD NPIVCTTTRA SKCACRIVLW VAISIGTSFL 61 EKFGQLCRAT WTLGATILLS SKRGTRVVTS SRYLKGARTF TIYIGRAMNC VTFSSTRFCW 121 GKSHWNIKSI D- >C08HBa0235H18.1+_PGL-6_AGS-2_PPS_2 (14158 14436) (frame '1'; 276 bp, 92 residues) 1 DSTTITSLTC TSACSIKVAT STTPYTCHLS SPRSIDDPCL ASIETSTTAY RSRCRPNGVW 61 TVVAYLNSGS ISISHTKKEE ENKRRCQVAH VC- 3-phase translation of AGS-2 (-strand): . . . . . . 14446 TATATACATTTCAACAAACATGGGCTACTTGACATCTTCTTTTGTTCTCTTCTTCCTTCT Y I H F N K H G L L D I F F C S L L P S I Y I S T N M G Y L T S S F V L F F L L Y T F Q Q T W A T - H L L L F S S S F . . . . . . 14386 TTGTGTGACTTATACTTATGCTGCCACTATTGAGGTACGCAACAACTGTCCATACACCGT L C D L Y L C C H Y - G T Q Q L S I H R C V T Y T Y A A T I E V R N N C P Y T V F V - L I L M L P L L R Y A T T V H T P . . . . . . 14326 TTGGGCGGCATCGACTCCGATAGGCGGTGGTCGACGTCTCAATCGAGGCCAAACATGGGT L G G I D S D R R W S T S Q S R P N M G W A A S T P I G G G R R L N R G Q T W V F G R H R L R - A V V D V S I E A K H G . . . . . . 14266 CATCAATGCTCCGAGGGGAACTAAGATGGCACGTATATGGGGTCGTACTGGTTGCAACTT H Q C S E G N - D G T Y M G S Y W L Q L I N A P R G T K M A R I W G R T G C N F S S M L R G E L R W H V Y G V V L V A T . . . . . . 14206 TAATGCTGCAGGCAGAGGTACATGTCAGACTGGTGATTGTGGTGGAGTCTTACAGTGTAC - C C R Q R Y M S D W - L W W S L T V Y N A A G R G T C Q T G D C G G V L Q C T L M L Q A E V H V R L V I V V E S Y S V . . . . . . 14146 CGGATGGGGCAAACCCCCAAACACCCTAGCCGAGTACGCCTTGGACCAGTTTAGCAACTT R M G Q T P K H P S R V R L G P V - Q L G W G K P P N T L A E Y A L D Q F S N L P D G A N P Q T P - P S T P W T S L A T . . . . . . 14086 AGATTTTTGGGACATTTCTTTAGTCGATGGATTTAATATTCCAATGACTTTTGCCCCAAC R F L G H F F S R W I - Y S N D F C P N D F W D I S L V D G F N I P M T F A P T - I F G T F L - S M D L I F Q - L L P Q . . . . . . 14026 AAAACCTAGTGGAGGAAAATGTCACGCAATTCATTGCACGGCCAATATAAATGGTGAATG K T - W R K M S R N S L H G Q Y K W - M K P S G G K C H A I H C T A N I N G E C Q N L V E E N V T Q F I A R P I - M V N . . . . . . 13966 TCCTCGCGCCCTTAAGGTACCTGGAGGATGTAACAACCCTTGTACCACGTTTGGAGGACA S S R P - G T W R M - Q P L Y H V W R T P R A L K V P G G C N N P C T T F G G Q V L A P L R Y L E D V T T L V P R L E D . . . . . . 13906 ACAATATTGTTGCACCCAAGGTCCATGTGGCCCTACAGAGTTGTCCAAATTTTTCAAGAA T I L L H P R S M W P Y R V V Q I F Q E Q Y C C T Q G P C G P T E L S K F F K K N N I V A P K V H V A L Q S C P N F S R . . . . . . 13846 AAGATGTCCCGATGCTTATAGCTACCCACAAGACGATCCTACAAGCACATTTACTTGCCC K M S R C L - L P T R R S Y K H I Y L P R C P D A Y S Y P Q D D P T S T F T C P K D V P M L I A T H K T I L Q A H L L A . . . . . . 13786 TGGTGGTAGTACAAACTATAGGGTTGTCTTTTGTCCTAATGGTGTTGCTGATCCAAATTT W W - Y K L - G C L L S - W C C - S K F G G S T N Y R V V F C P N G V A D P N F L V V V Q T I G L S F V L M V L L I Q I . . . . . . 13726 CCCCTTGGAGATGCCTGCAAGTACTGATGAAGTGGCCAAGTGAATTTGAGTTTCTTCATT P L G D A C K Y - - S G Q V N L S F F I P L E M P A S T D E V A K - I - V S S F S P W R C L Q V L M K W P S E F E F L H . . . . . . 13666 TTAAATCGCCTCAATTAGTCAACTGATCTCTACCGTAATGAAAAATCTTAATAGCTCAGT L N R L N - S T D L Y R N E K S - - L S - I A S I S Q L I S T V M K N L N S S V F K S P Q L V N - S L P - - K I L I A Q . . . . . . 13606 TTTTTAAATATTCACTTTTACTTTATTGATAAGAGTTCGTAACAAACTTAAAGACCGGAA F L N I H F Y F I D K S S - Q T - R P E F - I F T F T L L I R V R N K L K D R N F F K Y S L L L Y - - E F V T N L K T G . . . . . . 13546 TAAGAGTTACATCTCATGTGTACTTTTGTCTTAGATGTATAAAACAACAGTGCATTTGAA - E L H L M C T F V L D V - N N S A F E K S Y I S C V L L S - M Y K T T V H L N I R V T S H V Y F C L R C I K Q Q C I - . . . . 13486 TTATCGTTCTTTTTTTTTAAAAAAAAAATAA L S F F F F K K K I Y R S F F L K K K - I I V L F F - K K N Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1-_PGL-6_AGS-2_PPS_1 (14445 13684) (frame '2'; 759 bp, 253 residues) 1 IYISTNMGYL TSSFVLFFLL CVTYTYAATI EVRNNCPYTV WAASTPIGGG RRLNRGQTWV 61 INAPRGTKMA RIWGRTGCNF NAAGRGTCQT GDCGGVLQCT GWGKPPNTLA EYALDQFSNL 121 DFWDISLVDG FNIPMTFAPT KPSGGKCHAI HCTANINGEC PRALKVPGGC NNPCTTFGGQ 181 QYCCTQGPCG PTELSKFFKK RCPDAYSYPQ DDPTSTFTCP GGSTNYRVVF CPNGVADPNF 241 PLEMPASTDE VAK- AGS-3 (15214 15316,15420 15515,15978 16296) SCR (e 1.000 d 0.747 a 1.000,e 1.000 d 0.717 a 0.999,e 1.000) Exon 1 15214 15316 ( 103 n); score: 1.000 Intron 1 15317 15419 ( 103 n); Pd: 0.747 Pa: 1.000 Exon 2 15420 15515 ( 96 n); score: 1.000 Intron 2 15516 15977 ( 462 n); Pd: 0.717 Pa: 0.999 Exon 3 15978 16296 ( 319 n); score: 1.000 PGS (15214 15316,15420 15436) SGN-E255656+ PGS (15215 15316,15420 15515,15978 16295) SGN-E398199+ PGS (15215 15316,15420 15515,15978 16294) SGN-E395189+ PGS (15216 15316,15420 15515,15978 16296) SGN-E294184+ PGS (15216 15316,15420 15515,15978 16295) SGN-E372772+ PGS (15216 15316,15420 15515,15978 16291) SGN-E204130+ PGS (15216 15316,15420 15508) SGN-E262621+ 3-phase translation of AGS-3 (+strand): . . . . . . 15214 ACAAATATAAACTTTAGATTCTTAAAAACAAAGCTGAATTATATGGAGGCAAATAAGTCT T N I N F R F L K T K L N Y M E A N K S Q I - T L D S - K Q S - I I W R Q I S L K Y K L - I L K N K A E L Y G G K - V . . . . . : . 15274 ATGGTGAAGTTGGTTGCTTTCTTGATAATTCTTGTATCATCAT : GCTTTCAATCTCTCACT M V K L V A F L I I L V S S : C F Q S L T W - S W L L S - - F L Y H H : A F N L S L Y G E V G C F L D N S C I I M : L S I S H . . . . . . 15437 GCTCAAGATTTGGAAATCGAAGTTAGCGATGGCTTAAATGTATTGCAAGTACATGATGTG A Q D L E I E V S D G L N V L Q V H D V L K I W K S K L A M A - M Y C K Y M M C C S R F G N R S - R W L K C I A S T - C . . : . . . . 15497 TCTCAATCTTTTTGTCCAG : GTGTGACAAAGGAAAGTTGGCCAGAACTTCTTGGAACACCA S Q S F C P : G V T K E S W P E L L G T P L N L F V Q : V - Q R K V G Q N F L E H Q V S I F L S R : C D K G K L A R T S W N T . . . . . . 16019 GCTAAGTTTGCAAAGCAAATAATTCAAAAGGAAAATCCAAAATTAACAAATGTTGAAACT A K F A K Q I I Q K E N P K L T N V E T L S L Q S K - F K R K I Q N - Q M L K L S - V C K A N N S K G K S K I N K C - N . . . . . . 16079 CTACTGAATGGTTCAGCTTTTACAGAAGATTTGAGATGCAATAGAGTTCGTCTTTTTGTA L L N G S A F T E D L R C N R V R L F V Y - M V Q L L Q K I - D A I E F V F L - S T E W F S F Y R R F E M Q - S S S F C . . . . . . 16139 AATTTATTGGACATTGTTGTACAAACTCCCAAAGTTGGTTGAACAAAATTAATTGATGTT N L L D I V V Q T P K V G - T K L I D V I Y W T L L Y K L P K L V E Q N - L M L K F I G H C C T N S Q S W L N K I N - C . . . . . . 16199 ATATCATATGTATCTAGCCTCCACAAAAATAAATTGGAGATGTATGGTTAAAATTTCCAC I S Y V S S L H K N K L E M Y G - N F H Y H M Y L A S T K I N W R C M V K I S T Y I I C I - P P Q K - I G D V W L K F P . . . . 16259 TATATTTGGTGATAAATAAATGTGGCTTTTAATATTAA Y I W - - I N V A F N I I F G D K - M W L L I L L Y L V I N K C G F - Y - Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1+_PGL-6_AGS-3_PPS_1 (15214 15316,15420 15515,15978 16180) (frame '1'; 399 bp, 133 residues) 1 TNINFRFLKT KLNYMEANKS MVKLVAFLII LVSSCFQSLT AQDLEIEVSD GLNVLQVHDV 61 SQSFCPGVTK ESWPELLGTP AKFAKQIIQK ENPKLTNVET LLNGSAFTED LRCNRVRLFV 121 NLLDIVVQTP KVG- PGL 7 (+ strand): 20427 20532 AGS-1 (20427 20532) SCR (e 1.000) Exon 1 20427 20532 ( 106 n); score: 1.000 PGS (20427 20532) SGN-E396899- PGS (20427 20532) SGN-E391490- PGS (20427 20532) SGN-E391444- PGS (20427 20532) SGN-E396735- PGS (20427 20532) SGN-E395324- PGS (20427 20532) SGN-E396750- PGS (20427 20532) SGN-E396661- PGS (20427 20532) SGN-E397114- PGS (20427 20532) SGN-E390817- PGS (20427 20532) SGN-E397010- PGS (20427 20532) SGN-E397205- PGS (20427 20532) SGN-E397267- PGS (20427 20532) SGN-E396454- PGS (20427 20532) SGN-E391362- 3-phase translation of AGS-1 (+strand): . . . . . . 20427 AATTCAGGCCACTTGTAGTTCGATAAGCTTGATTTACCGCACGATTTCAAAGAATCAAAA N S G H L - F D K L D L P H D F K E S K I Q A T C S S I S L I Y R T I S K N Q K F R P L V V R - A - F T A R F Q R I K . . . . . 20487 GCCACCTTGACACCGAATTATGAAGGTATCGAAATGCTCGAGAATA A T L T P N Y E G I E M L E N P P - H R I M K V S K C S R I S H L D T E L - R Y R N A R E Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (-strand): . . . . . . 20532 TATTCTCGAGCATTTCGATACCTTCATAATTCGGTGTCAAGGTGGCTTTTGATTCTTTGA Y S R A F R Y L H N S V S R W L L I L - I L E H F D T F I I R C Q G G F - F F E F S S I S I P S - F G V K V A F D S L . . . . . 20472 AATCGTGCGGTAAATCAAGCTTATCGAACTACAAGTGGCCTGAATT N R A V N Q A Y R T T S G L N I V R - I K L I E L Q V A - I K S C G K S S L S N Y K W P E Maximal non-overlapping open reading frames (>= 64 codons): none PGL 8 (- strand): 23444 22803 AGS-1 (23444 22803) SCR (e 0.994) Exon 1 23444 22803 ( 642 n); score: 0.994 PGS (23444 22803) SGN-E396454- PGS (23438 22803) SGN-E391362- PGS (23383 22803) SGN-E397010- PGS (23377 22803) SGN-E391444- PGS (23373 22803) SGN-E396735- PGS (23371 22803) SGN-E390817- PGS (23366 22803) SGN-E396661- PGS (23362 22803) SGN-E395324- PGS (23302 22803) SGN-E397114- PGS (23292 22803) SGN-E391490- PGS (23215 22803) SGN-E397205- PGS (23146 22803) SGN-E397267- PGS (23145 22803) SGN-E396750- PGS (22921 22803) SGN-E396899- 3-phase translation of AGS-1 (-strand): . . . . . . 23444 CTGCCTCAACGGGATACGTAGGCGCCACAAGGGCTCGGTCATATATCTCGTAAATTCTAT L P Q R D T - A P Q G L G H I S R K F Y C L N G I R R R H K G S V I Y L V N S I A S T G Y V G A T R A R S Y I S - I L . . . . . . 23384 TCCCCCCTTTCTACAATAGAAACTGGGACAGAATTTTGAGAGGGACTCAAAAATTCTCCA S P L S T I E T G T E F - E G L K N S P P P F L Q - K L G Q N F E R D S K I L Q F P P F Y N R N W D R I L R G T Q K F S . . . . . . 23324 GAAGGAACCTTCTCTTCAGCGGATCAAACTAAAGACATTTCGAATTTGCGACTGGGACAG E G T F S S A D Q T K D I S N L R L G Q K E P S L Q R I K L K T F R I C D W D R R R N L L F S G S N - R H F E F A T G T . . . . . . 23264 AATTTTTTAGAAGATCTCAAAAATTCCGAGATCTGTTCGGTTACAATGGAAAGATGAACA N F L E D L K N S E I C S V T M E R - T I F - K I S K I P R S V R L Q W K D E Q E F F R R S Q K F R D L F G Y N G K M N . . . . . . 23204 AGATACTAAACTGGGACAGAAATTTTGAGGATGGCCTCAAAATTTCGTCATGGGACTTCC R Y - T G T E I L R M A S K F R H G T S D T K L G Q K F - G W P Q N F V M G L P K I L N W D R N F E D G L K I S S W D F . . . . . . 23144 CCACAAGTCTGGAATGCCTCTGAAATTCATTCGACAAGCGTCGGACTCAAAGAAGCTCGT P Q V W N A S E I H S T S V G L K E A R H K S G M P L K F I R Q A S D S K K L V P T S L E C L - N S F D K R R T Q R S S . . . . . . 23084 TAAGCCTGACATGACATGACTTGGCATTGACTTTTTCGAGATACTATTTCTTAAAAAATT - A - H D M T W H - L F R D T I S - K I K P D M T - L G I D F F E I L F L K K F L S L T - H D L A L T F S R Y Y F L K N . . . . . . 23024 TCTTGCTTCTCTTAAAAATTTCCCTTTTATATTTCATCTGTTTTGGCATAAGATATTTTC S C F S - K F P F Y I S S V L A - D I F L A S L K N F P F I F H L F W H K I F S F L L L L K I S L L Y F I C F G I R Y F . . . . . . 22964 TTATCTATCAAGAGTCGAGAAATCGGGAAATCAACCGAGGACGTCAAGACAAGGAGCAAA L S I K S R E I G K S T E D V K T R S K Y L S R V E K S G N Q P R T S R Q G A N L I Y Q E S R N R E I N R G R Q D K E Q . . . . . . 22904 CAATCGAAGGGATCGACACAGATCAGTATGTTTAAAACTGACAATTTTTCTGTGGATGCA Q S K G S T Q I S M F K T D N F S V D A N R R D R H R S V C L K L T I F L W M Q T I E G I D T D Q Y V - N - Q F F C G C . . . . . 22844 GGTTTATAGCTTCACTTCGAAATCGGCCGAATTCTTCCGACT G L - L H F E I G R I L P T V Y S F T S K S A E F F R R F I A S L R N R P N S S D Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1-_PGL-8_AGS-1_PPS_1 (23065 22805) (frame '2'; 261 bp, 87 residues) 1 LGIDFFEILF LKKFLASLKN FPFIFHLFWH KIFSYLSRVE KSGNQPRTSR QGANNRRDRH 61 RSVCLKLTIF LWMQVYSFTS KSAEFFR 3-phase translation of AGS-1 (+strand): . . . . . . 22803 AGTCGGAAGAATTCGGCCGATTTCGAAGTGAAGCTATAAACCTGCATCCACAGAAAAATT S R K N S A D F E V K L - T C I H R K I V G R I R P I S K - S Y K P A S T E K L S E E F G R F R S E A I N L H P Q K N . . . . . . 22863 GTCAGTTTTAAACATACTGATCTGTGTCGATCCCTTCGATTGTTTGCTCCTTGTCTTGAC V S F K H T D L C R S L R L F A P C L D S V L N I L I C V D P F D C L L L V L T C Q F - T Y - S V S I P S I V C S L S - . . . . . . 22923 GTCCTCGGTTGATTTCCCGATTTCTCGACTCTTGATAGATAAGAAAATATCTTATGCCAA V L G - F P D F S T L D R - E N I L C Q S S V D F P I S R L L I D K K I S Y A K R P R L I S R F L D S - - I R K Y L M P . . . . . . 22983 AACAGATGAAATATAAAAGGGAAATTTTTAAGAGAAGCAAGAAATTTTTTAAGAAATAGT N R - N I K G K F L R E A R N F L R N S T D E I - K G N F - E K Q E I F - E I V K Q M K Y K R E I F K R S K K F F K K - . . . . . . 23043 ATCTCGAAAAAGTCAATGCCAAGTCATGTCATGTCAGGCTTAACGAGCTTCTTTGAGTCC I S K K S M P S H V M S G L T S F F E S S R K S Q C Q V M S C Q A - R A S L S P Y L E K V N A K S C H V R L N E L L - V . . . . . . 23103 GACGCTTGTCGAATGAATTTCAGAGGCATTCCAGACTTGTGGGGAAGTCCCATGACGAAA D A C R M N F R G I P D L W G S P M T K T L V E - I S E A F Q T C G E V P - R N R R L S N E F Q R H S R L V G K S H D E . . . . . . 23163 TTTTGAGGCCATCCTCAAAATTTCTGTCCCAGTTTAGTATCTTGTTCATCTTTCCATTGT F - G H P Q N F C P S L V S C S S F H C F E A I L K I S V P V - Y L V H L S I V I L R P S S K F L S Q F S I L F I F P L . . . . . . 23223 AACCGAACAGATCTCGGAATTTTTGAGATCTTCTAAAAAATTCTGTCCCAGTCGCAAATT N R T D L G I F E I F - K I L S Q S Q I T E Q I S E F L R S S K K F C P S R K F - P N R S R N F - D L L K N S V P V A N . . . . . . 23283 CGAAATGTCTTTAGTTTGATCCGCTGAAGAGAAGGTTCCTTCTGGAGAATTTTTGAGTCC R N V F S L I R - R E G S F W R I F E S E M S L V - S A E E K V P S G E F L S P S K C L - F D P L K R R F L L E N F - V . . . . . . 23343 CTCTCAAAATTCTGTCCCAGTTTCTATTGTAGAAAGGGGGGAATAGAATTTACGAGATAT L S K F C P S F Y C R K G G I E F T R Y S Q N S V P V S I V E R G E - N L R D I P L K I L S Q F L L - K G G N R I Y E I . . . . . 23403 ATGACCGAGCCCTTGTGGCGCCTACGTATCCCGTTGAGGCAG M T E P L W R L R I P L R Q - P S P C G A Y V S R - G Y D R A L V A P T Y P V E A Maximal non-overlapping open reading frames (>= 64 codons): none PGL 9 (- strand): 24794 24064 AGS-1 (24794 24064) SCR (e 0.926) Exon 1 24794 24064 ( 731 n); score: 0.926 PGS (24794 24064) SGN-E355122+ PGS (24794 24104) SGN-E350936+ PGS (24794 24105) SGN-E353644+ 3-phase translation of AGS-1 (-strand): . . . . . . 24794 TGGGGAATGGATGTCATCGGCCCTATAGAACCGGTCGCTTCCAATGGACACAGATTTATT W G M D V I G P I E P V A S N G H R F I G E W M S S A L - N R S L P M D T D L F G N G C H R P Y R T G R F Q W T Q I Y . . . . . . 24734 TTGGTTGCCATCGATTATTTCACCAAATGGGTGGAAGCAGCCTCTTACAAATCGGTAACC L V A I D Y F T K W V E A A S Y K S V T W L P S I I S P N G W K Q P L T N R - P F G C H R L F H Q M G G S S L L Q I G N . . . . . . 24674 AAGAAAGTGGTGGCCGACTTTGTCCGCAACAATCTGATCTGCCGATTTGGAGTTCCAGAA K K V V A D F V R N N L I C R F G V P E R K W W P T L S A T I - S A D L E F Q N Q E S G G R L C P Q Q S D L P I W S S R . . . . . . 24614 TCCATCATCACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGAA S I I T D N G A N L N S H L M K E I C E P S S L I T V Q I S T V I - - K R Y V N I H H H - - R C K S Q Q S S D E R D M - . . . . . . 24554 CAATTTAAGATTATTCACCGAAGGTCAACTGCTTATCGCCCTCAAATGAACGGAGCTGTA Q F K I I H R R S T A Y R P Q M N G A V N L R L F T E G Q L L I A L K - T E L - T I - D Y S P K V N C L S P S N E R S C . . . . . . 24494 GAGGCCGCCAACAAGAACATCAAGAAGATTCTGGGGAAAATGATTGACAAGCAGCGGGGT E A A N K N I K K I L G K M I D K Q R G R P P T R T S R R F W G K - L T S S G V R G R Q Q E H Q E D S G E N D - Q A A G . . . . . . 24434 TGGCATGAAATGTTGCCATATGCTCTACTGGGTTATCGAACGACGGTCAGAACATCAACT W H E M L P Y A L L G Y R T T V R T S T G M K C C H M L Y W V I E R R S E H Q L L A - N V A I C S T G L S N D G Q N I N . . . . . . 24374 GGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTGTCGAAGTCGAG G A T P Y L L V Y G T E A V V P V E V E G L L H T C - Y T E Q K Q S Y L S K S R W G Y S I L A S I R N R S S R T C R S R . . . . . . 24314 ATACCGTCACTGAGGATCATCCAAGAAGCTGAGCTAAGTAATGCTGAGTGGGTTAGCAAA I P S L R I I Q E A E L S N A E W V S K Y R H - G S S K K L S - V M L S G L A N D T V T E D H P R S - A K - C - V G - Q . . . . . . 24254 CGGATTGATCAACTAGCCTTGATTGATGAAAAGAGGATGGTTGCCGTTTGCCATGGCCAG R I D Q L A L I D E K R M V A V C H G Q G L I N - P - L M K R G W L P F A M A S T D - S T S L D - - K E D G C R L P W P . . . . . . 24194 TTGTATAGACAAAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAGAAATTTTAAA L Y R Q R M T R A F H K R V R A R N F K C I D K E - L A L F T K E - E P E I L K V V - T K N D S R F S Q K S K S Q K F - . . . . . . 24134 GTTGGTCAGTTGGTTCTTAAGCGTATTTTTCCTCATCAAGACGAGTACAAAGGAAAGTTC V G Q L V L K R I F P H Q D E Y K G K F L V S W F L S V F F L I K T S T K E S S S W S V G S - A Y F S S S R R V Q R K V . . 24074 GCACCAAACTG A P N H Q T R T K L Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1-_PGL-9_AGS-1_PPS_1 (24794 24066) (frame '1'; 729 bp, 243 residues) 1 WGMDVIGPIE PVASNGHRFI LVAIDYFTKW VEAASYKSVT KKVVADFVRN NLICRFGVPE 61 SIITDNGANL NSHLMKEICE QFKIIHRRST AYRPQMNGAV EAANKNIKKI LGKMIDKQRG 121 WHEMLPYALL GYRTTVRTST GATPYLLVYG TEAVVPVEVE IPSLRIIQEA ELSNAEWVSK 181 RIDQLALIDE KRMVAVCHGQ LYRQRMTRAF HKRVRARNFK VGQLVLKRIF PHQDEYKGKF 241 APN 3-phase translation of AGS-1 (+strand): . . . . . . 24064 CAGTTTGGTGCGAACTTTCCTTTGTACTCGTCTTGATGAGGAAAAATACGCTTAAGAACC Q F G A N F P L Y S S - - G K I R L R T S L V R T F L C T R L D E E K Y A - E P V W C E L S F V L V L M R K N T L K N . . . . . . 24124 AACTGACCAACTTTAAAATTTCTGGCTCTTACTCTTTTGTGAAAAGCGCGAGTCATTCTT N - P T L K F L A L T L L - K A R V I L T D Q L - N F W L L L F C E K R E S F F Q L T N F K I S G S Y S F V K S A S H S . . . . . . 24184 TGTCTATACAACTGGCCATGGCAAACGGCAACCATCCTCTTTTCATCAATCAAGGCTAGT C L Y N W P W Q T A T I L F S S I K A S V Y T T G H G K R Q P S S F H Q S R L V L S I Q L A M A N G N H P L F I N Q G - . . . . . . 24244 TGATCAATCCGTTTGCTAACCCACTCAGCATTACTTAGCTCAGCTTCTTGGATGATCCTC - S I R L L T H S A L L S S A S W M I L D Q S V C - P T Q H Y L A Q L L G - S S L I N P F A N P L S I T - L S F L D D P . . . . . . 24304 AGTGACGGTATCTCGACTTCGACAGGTACGACTGCTTCTGTTCCGTATACTAGCAAGTAT S D G I S T S T G T T A S V P Y T S K Y V T V S R L R Q V R L L L F R I L A S M Q - R Y L D F D R Y D C F C S V Y - Q V . . . . . . 24364 GGAGTAGCCCCAGTTGATGTTCTGACCGTCGTTCGATAACCCAGTAGAGCATATGGCAAC G V A P V D V L T V V R - P S R A Y G N E - P Q L M F - P S F D N P V E H M A T W S S P S - C S D R R S I T Q - S I W Q . . . . . . 24424 ATTTCATGCCAACCCCGCTGCTTGTCAATCATTTTCCCCAGAATCTTCTTGATGTTCTTG I S C Q P R C L S I I F P R I F L M F L F H A N P A A C Q S F S P E S S - C S C H F M P T P L L V N H F P Q N L L D V L . . . . . . 24484 TTGGCGGCCTCTACAGCTCCGTTCATTTGAGGGCGATAAGCAGTTGACCTTCGGTGAATA L A A S T A P F I - G R - A V D L R - I W R P L Q L R S F E G D K Q L T F G E - V G G L Y S S V H L R A I S S - P S V N . . . . . . 24544 ATCTTAAATTGTTCACATATCTCTTTCATCAGATGACTGTTGAGATTTGCACCGTTATCA I L N C S H I S F I R - L L R F A P L S S - I V H I S L S S D D C - D L H R Y Q N L K L F T Y L F H Q M T V E I C T V I . . . . . . 24604 GTGATGATGGATTCTGGAACTCCAAATCGGCAGATCAGATTGTTGCGGACAAAGTCGGCC V M M D S G T P N R Q I R L L R T K S A - - W I L E L Q I G R S D C C G Q S R P S D D G F W N S K S A D Q I V A D K V G . . . . . . 24664 ACCACTTTCTTGGTTACCGATTTGTAAGAGGCTGCTTCCACCCATTTGGTGAAATAATCG T T F L V T D L - E A A S T H L V K - S P L S W L P I C K R L L P P I W - N N R H H F L G Y R F V R G C F H P F G E I I . . . . . . 24724 ATGGCAACCAAAATAAATCTGTGTCCATTGGAAGCGACCGGTTCTATAGGGCCGATGACA M A T K I N L C P L E A T G S I G P M T W Q P K - I C V H W K R P V L - G R - H D G N Q N K S V S I G S D R F Y R A D D . . 24784 TCCATTCCCCA S I P P F P I H S P Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1+_PGL-9_AGS-1_PPS_1 (24531 24794) (frame '0'; 264 bp, 88 residues) 1 PSVNNLKLFT YLFHQMTVEI CTVISDDGFW NSKSADQIVA DKVGHHFLGY RFVRGCFHPF 61 GEIIDGNQNK SVSIGSDRFY RADDIHSP PGL 10 (+ strand): 25459 26192 AGS-1 (25459 25775,25891 26192) SCR (e 0.833 d 0.000 a 0.000,e 0.808) Exon 1 25459 25775 ( 317 n); score: 0.833 Intron 1 25776 25890 ( 115 n); Pd: 0.000 Pa: 0.000 Exon 2 25891 26192 ( 302 n); score: 0.808 PGS (25459 25775,25891 26192) SGN-E352060+ 3-phase translation of AGS-1 (+strand): . . . . . . 25459 AGGTCTGAATCTCCAATAACCAGTAACTCGTAAACATTCATGTCAACGGCCATTTTCAAA R S E S P I T S N S - T F M S T A I F K G L N L Q - P V T R K H S C Q R P F S N V - I S N N Q - L V N I H V N G H F Q . . . . . . 25519 CCGAGAATGCAAGCTTCATACTCAGCCATGTTGTTTGTGCAGTTGAACCGTAGCTTAGCC P R M Q A S Y S A M L F V Q L N R S L A R E C K L H T Q P C C L C S - T V A - P T E N A S F I L S H V V C A V E P - L S . . . . . . 25579 GCCATAGGATAGTGCTGACCAGATTCTGATACCAAGACTGCTCCAACACCTTTACCCTGG A I G - C - P D S D T K T A P T P L P W P - D S A D Q I L I P R L L Q H L Y P G R H R I V L T R F - Y Q D C S N T F T L . . . . . . 25639 TGATTCACCGCTCCATCAAAGAATAATCTCCAACCTGGATAAACTTCAGAGATATCTTCA - F T A P S K N N L Q P G - T S E I S S D S P L H Q R I I S N L D K L Q R Y L H V I H R S I K E - S P T W I N F R D I F . . . . . . 25699 CCCACAAATGACACTTCTTCATCGTGAAAATATGTCTTGAGAGGTTCATACTCTTCATCA P T N D T S S S - K Y V L R G S Y S S S P Q M T L L H R E N M S - E V H T L H Q T H K - H F F I V K I C L E R F I L F I . . : . . . . 25759 ACGGGATTTTCCGCAAG : ATATACTTCAATGGATCCATTCTGGAGATAAGATATGTAGTAT T G F S A R : Y T S M D P F W R - D M - Y R D F P Q : D I L Q W I H S G D K I C S I N G I F R K : I Y F N G S I L E I R Y V V . . . . . . 25934 ACGACGACAAATAGTGCCTCAGCTTCTGGGCAAGCCATGTCAGAGCACAGCATGTTCTTT T T T N S A S A S G Q A M S E H S M F F R R Q I V P Q L L G K P C Q S T A C S F Y D D K - C L S F W A S H V R A Q H V L . . . . . . 25994 CCAGCAAAGTGTAACGAGACTCGTACGGAGTAAACTTCTTGCTGATGTAGTAGATAGCTT P A K C N E T R T E - T S C - C S R - L Q Q S V T R L V R S K L L A D V V D S F S S K V - R D S Y G V N F L L M - - I A . . . . . . 26054 TTTCCTTCTTCCCTGTCTCGTCGTGTTGACCAAGTACACATCCAAAGACGTTATCCGAGA F P S S L S R R V D Q V H I Q R R Y P R F L L P C L V V L T K Y T S K D V I R D F S F F P V S S C - P S T H P K T L S E . . . . . . 26114 CAGACAAATATAGCAACAAAGGACTCCCTTCTCGCGGAGGAACCAATACTGGTGGGTTAG Q T N I A T K D S L L A E E P I L V G - R Q I - Q Q R T P F S R R N Q Y W W V R T D K Y S N K G L P S R G G T N T G G L . . 26174 ACAAGTAGCTCTTGATAGC T S S S - - Q V A L D S D K - L L I Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1+_PGL-10_AGS-1_PPS_1 (25739 25775,25891 26126) (frame '2'; 270 bp, 90 residues) 1 EVHTLHQRDF PQDILQWIHS GDKICSIRRQ IVPQLLGKPC QSTACSFQQS VTRLVRSKLL 61 ADVVDSFFLL PCLVVLTKYT SKDVIRDRQI - PGL 11 (- strand): 31477 30943 AGS-1 (31477 30943) SCR (e 0.964) Exon 1 31477 30943 ( 535 n); score: 0.964 PGS (31477 30943) SGN-E243204- 3-phase translation of AGS-1 (-strand): . . . . . . 31477 CAGATTTCCCAAGATATCTCCAAACAAACAAATTCCTGTTTGTTCAAAATATATATCCGT Q I S Q D I S K Q T N S C L F K I Y I R R F P K I S P N K Q I P V C S K Y I S V D F P R Y L Q T N K F L F V Q N I Y P . . . . . . 31417 CCTTATTCGTGGGTTAAGATATCCTCAAACAAAACGACTTGTGTGCTTATCTGTTTTATG P Y S W V K I S S N K T T C V L I C F M L I R G L R Y P Q T K R L V C L S V L C S L F V G - D I L K Q N D L C A Y L F Y . . . . . . 31357 TGCGATATTATGCATTTTGTACTCTGGATATGCACTAACAAATTTGCCTTTGAGTTGTTT C D I M H F V L W I C T N K F A F E L F A I L C I L Y S G Y A L T N L P L S C F V R Y Y A F C T L D M H - Q I C L - V V . . . . . . 31297 CTACCTCTCAGGTACCTTTTACTGATCTGTGTCGATAAAGCTGGCAGATCATTCTTACTT L P L R Y L L L I C V D K A G R S F L L Y L S G T F Y - S V S I K L A D H S Y F S T S Q V P F T D L C R - S W Q I I L T . . . . . . 31237 CACCAGGTCAAAAGGTCCTACAGATTCCTTCCCTCGATCAAATTCAGACAAAGGAAAAAT H Q V K R S Y R F L P S I K F R Q R K N T R S K G P T D S F P R S N S D K G K I S P G Q K V L Q I P S L D Q I Q T K E K . . . . . . 31177 AGTTATGGGAGACAACAATGACGAAGGGCGTCTTACAGACGTTGTGGTGGCTCAGCCCAC S Y G R Q Q - R R A S Y R R C G G S A H V M G D N N D E G R L T D V V V A Q P T - L W E T T M T K G V L Q T L W W L S P . . . . . . 31117 TGTAGTGGAACAGAACGAATTGATCATGCAACTGATGCAACAGATTGCTGAAATGAAAGT C S G T E R I D H A T D A T D C - N E S V V E Q N E L I M Q L M Q Q I A E M K V L - W N R T N - S C N - C N R L L K - K . . . . . . 31057 TGAAATGCAACGGAGACAGGATGCGCCTCCACCTGGATTTGGTACTAATATTGCTGATGC - N A T E T G C A S T W I W Y - Y C - C E M Q R R Q D A P P P G F G T N I A D A L K C N G D R M R L H L D L V L I L L M . . . . . . 30997 AAGACCTCCGGTCTACTTCCTTTCATCAAACATAGATCCAACTCAGAACCAGCCT K T S G L L P F I K H R S N S E P A R P P V Y F L S S N I D P T Q N Q P Q D L R S T S F H Q T - I Q L R T S Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1-_PGL-11_AGS-1_PPS_1 (31272 30943) (frame '2'; 330 bp, 110 residues) 1 SVSIKLADHS YFTRSKGPTD SFPRSNSDKG KIVMGDNNDE GRLTDVVVAQ PTVVEQNELI 61 MQLMQQIAEM KVEMQRRQDA PPPGFGTNIA DARPPVYFLS SNIDPTQNQP >C08HBa0235H18.1-_PGL-11_AGS-1_PPS_2 (31477 31157) (frame '1'; 318 bp, 106 residues) 1 QISQDISKQT NSCLFKIYIR PYSWVKISSN KTTCVLICFM CDIMHFVLWI CTNKFAFELF 61 LPLRYLLLIC VDKAGRSFLL HQVKRSYRFL PSIKFRQRKN SYGRQQ- 3-phase translation of AGS-1 (+strand): . . . . . . 30943 AGGCTGGTTCTGAGTTGGATCTATGTTTGATGAAAGGAAGTAGACCGGAGGTCTTGCATC R L V L S W I Y V - - K E V D R R S C I G W F - V G S M F D E R K - T G G L A S A G S E L D L C L M K G S R P E V L H . . . . . . 31003 AGCAATATTAGTACCAAATCCAGGTGGAGGCGCATCCTGTCTCCGTTGCATTTCAACTTT S N I S T K S R W R R I L S P L H F N F A I L V P N P G G G A S C L R C I S T F Q Q Y - Y Q I Q V E A H P V S V A F Q L . . . . . . 31063 CATTTCAGCAATCTGTTGCATCAGTTGCATGATCAATTCGTTCTGTTCCACTACAGTGGG H F S N L L H Q L H D Q F V L F H Y S G I S A I C C I S C M I N S F C S T T V G S F Q Q S V A S V A - S I R S V P L Q W . . . . . . 31123 CTGAGCCACCACAACGTCTGTAAGACGCCCTTCGTCATTGTTGTCTCCCATAACTATTTT L S H H N V C K T P F V I V V S H N Y F - A T T T S V R R P S S L L S P I T I F A E P P Q R L - D A L R H C C L P - L F . . . . . . 31183 TCCTTTGTCTGAATTTGATCGAGGGAAGGAATCTGTAGGACCTTTTGACCTGGTGAAGTA S F V - I - S R E G I C R T F - P G E V P L S E F D R G K E S V G P F D L V K - F L C L N L I E G R N L - D L L T W - S . . . . . . 31243 AGAATGATCTGCCAGCTTTATCGACACAGATCAGTAAAAGGTACCTGAGAGGTAGAAACA R M I C Q L Y R H R S V K G T - E V E T E - S A S F I D T D Q - K V P E R - K Q K N D L P A L S T Q I S K R Y L R G R N . . . . . . 31303 ACTCAAAGGCAAATTTGTTAGTGCATATCCAGAGTACAAAATGCATAATATCGCACATAA T Q R Q I C - C I S R V Q N A - Y R T - L K G K F V S A Y P E Y K M H N I A H K N S K A N L L V H I Q S T K C I I S H I . . . . . . 31363 AACAGATAAGCACACAAGTCGTTTTGTTTGAGGATATCTTAACCCACGAATAAGGACGGA N R - A H K S F C L R I S - P T N K D G T D K H T S R F V - G Y L N P R I R T D K Q I S T Q V V L F E D I L T H E - G R . . . . . . 31423 TATATATTTTGAACAAACAGGAATTTGTTTGTTTGGAGATATCTTGGGAAATCTG Y I F - T N R N L F V W R Y L G K S I Y F E Q T G I C L F G D I L G N L I Y I L N K Q E F V C L E I S W E I Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1+_PGL-11_AGS-1_PPS_1 (30976 31194) (frame '1'; 216 bp, 72 residues) 1 KEVDRRSCIS NISTKSRWRR ILSPLHFNFH FSNLLHQLHD QFVLFHYSGL SHHNVCKTPF 61 VIVVSHNYFS FV- PGL 12 (- strand): 32166 31781 AGS-1 (32166 31781) SCR (e 0.969) Exon 1 32166 31781 ( 386 n); score: 0.969 PGS (32166 31781) SGN-E577849- 3-phase translation of AGS-1 (-strand): . . . . . . 32166 AGATTCAGAAGGTTAAGGAAGAAGGACTCAAAGTAGACGCGACCACGGCGATCTACAAAG R F R R L R K K D S K - T R P R R S T K D S E G - G R R T Q S R R D H G D L Q S I Q K V K E E G L K V D A T T A I Y K . . . . . . 32106 CTGCGGTCACAACATTGGATGAAGATCTGGCGTCACAGATAAAGAGAAAGAAGGAGGTTG L R S Q H W M K I W R H R - R E R R R L C G H N I G - R S G V T D K E K E G G - A A V T T L D E D L A S Q I K R K K E V . . . . . . 32046 AGATGGAAACCGAAAGCCTAAGGAAAAGGTTGAACTTGCTTCGTTTGGAGATACACGAAG R W K P K A - G K G - T C F V W R Y T K D G N R K P K E K V E L A S F G D T R R E M E T E S L R K R L N L L R L E I H E . . . . . . 31986 GAAAGGCGAGAGAGGCGAAGATAGATATCGAGACTGCTGTGTTGTTGGACAGAAGCACGG E R R E R R R - I S R L L C C W T E A R K G E R G E D R Y R D C C V V G Q K H G G K A R E A K I D I E T A V L L D R S T . . . . . . 31926 CGCTCGACGAGGAATTGGCAACCCATAGCGACCCAAAGGGCGGAAAATACCTCGCCCGTG R S T R N W Q P I A T Q R A E N T S P V A R R G I G N P - R P K G R K I P R P - A L D E E L A T H S D P K G G K Y L A R . . . . . . 31866 ATCAGGGAACAGGCAACAGTGGCCCCGGCCATGAAGTGATTGAGGAGGATGATGAAGAAG I R E Q A T V A P A M K - L R R M M K K S G N R Q Q W P R P - S D - G G - - R R D Q G T G N S G P G H E V I E E D D E E . . . 31806 AAATCGTCTACAAGCCTCCATTTTCG K S S T S L H F N R L Q A S I F E I V Y K P P F S Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1-_PGL-12_AGS-1_PPS_1 (32164 31781) (frame '0'; 384 bp, 128 residues) 1 IQKVKEEGLK VDATTAIYKA AVTTLDEDLA SQIKRKKEVE METESLRKRL NLLRLEIHEG 61 KAREAKIDIE TAVLLDRSTA LDEELATHSD PKGGKYLARD QGTGNSGPGH EVIEEDDEEE 121 IVYKPPFS 3-phase translation of AGS-1 (+strand): . . . . . . 31781 CGAAAATGGAGGCTTGTAGACGATTTCTTCTTCATCATCCTCCTCAATCACTTCATGGCC R K W R L V D D F F F I I L L N H F M A E N G G L - T I S S S S S S S I T S W P K M E A C R R F L L H H P P Q S L H G . . . . . . 31841 GGGGCCACTGTTGCCTGTTCCCTGATCACGGGCGAGGTATTTTCCGCCCTTTGGGTCGCT G A T V A C S L I T G E V F S A L W V A G P L L P V P - S R A R Y F P P F G S L R G H C C L F P D H G R G I F R P L G R . . . . . . 31901 ATGGGTTGCCAATTCCTCGTCGAGCGCCGTGCTTCTGTCCAACAACACAGCAGTCTCGAT M G C Q F L V E R R A S V Q Q H S S L D W V A N S S S S A V L L S N N T A V S I Y G L P I P R R A P C F C P T T Q Q S R . . . . . . 31961 ATCTATCTTCGCCTCTCTCGCCTTTCCTTCGTGTATCTCCAAACGAAGCAAGTTCAACCT I Y L R L S R L S F V Y L Q T K Q V Q P S I F A S L A F P S C I S K R S K F N L Y L S S P L S P F L R V S P N E A S S T . . . . . . 32021 TTTCCTTAGGCTTTCGGTTTCCATCTCAACCTCCTTCTTTCTCTTTATCTGTGACGCCAG F P - A F G F H L N L L L S L Y L - R Q F L R L S V S I S T S F F L F I C D A R F S L G F R F P S Q P P S F S L S V T P . . . . . . 32081 ATCTTCATCCAATGTTGTGACCGCAGCTTTGTAGATCGCCGTGGTCGCGTCTACTTTGAG I F I Q C C D R S F V D R R G R V Y F E S S S N V V T A A L - I A V V A S T L S D L H P M L - P Q L C R S P W S R L L - . . . 32141 TCCTTCTTCCTTAACCTTCTGAATCT S F F L N L L N P S S L T F - I V L L P - P S E S Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1+_PGL-12_AGS-1_PPS_1 (31783 32100) (frame '0'; 315 bp, 105 residues) 1 KMEACRRFLL HHPPQSLHGR GHCCLFPDHG RGIFRPLGRY GLPIPRRAPC FCPTTQQSRY 61 LSSPLSPFLR VSPNEASSTF SLGFRFPSQP PSFSLSVTPD LHPML- PGL 13 (- strand): 36411 34280 AGS-1 (34766 34280) SCR (e 0.742) Exon 1 34766 34280 ( 487 n); score: 0.742 PGS (34766 34280) SGN-E389635- PGS (34766 34280) SGN-E389893+ PGS (34766 34280) SGN-E549958+ PGS (34766 34280) SGN-E550487+ PGS (34737 34284) SGN-E550480- PGS (34766 34400) SGN-E233763+ 3-phase translation of AGS-1 (-strand): . . . . . . 34766 TTAACTGTTTAAATGTTTAAATTGTTTAGATTTTTAAACTGCTGCATACATAGCATACAT L T V - M F K L F R F L N C C I H S I H - L F K C L N C L D F - T A A Y I A Y I N C L N V - I V - I F K L L H T - H T . . . . . . 34706 ACTTCCGTCAAACGACACTTTTTTACATTTCCACTAAAGGACGATTATGCGGGTTCGCAG T S V K R H F F T F P L K D D Y A G S Q L P S N D T F L H F H - R T I M R V R S Y F R Q T T L F Y I S T K G R L C G F A . . . . . . 34646 TCGTTCGTTAACCAAAAATCTTCTCGGGGCACCCTGACGAGTGTAGTTGATTACTTGATA S F V N Q K S S R G T L T S V V D Y L I R S L T K N L L G A P - R V - L I T - - V V R - P K I F S G H P D E C S - L L D . . . . . . 34586 GTCAACGATCGTTAATTGTTCCAGCCCAAGTAGTCCGCTTGGGTTACCCATTCCACTCTA V N D R - L F Q P K - S A W V T H S T L S T I V N C S S P S S P L G L P I P L - S Q R S L I V P A Q V V R L G Y P F H S . . . . . . 34526 AATACAACCCACTCTTAGTCAAACTAGGATAGAGCGAAACCAAATCCCGAAAATAGCGCA N T T H S - S N - D R A K P N P E N S A I Q P T L S Q T R I E R N Q I P K I A H K Y N P L L V K L G - S E T K S R K - R . . . . . . 34466 TTGGCCTAAGATGACCCGACACCCAAGGAGTGTCGGGCCCATTAGAAAAGTCCACCTTGA L A - D D P T P K E C R A H - K S P P - W P K M T R H P R S V G P I R K V H L E I G L R - P D T Q G V S G P L E K S T L . . . . . . 34406 GTCCAAAGAGCCTGCGGCTCGATAGGACGCTCATGTTTGTTGTTTAAATTTGAAGGATGT V Q R A C G S I G R S C L L F K F E G C S K E P A A R - D A H V C C L N L K D V S P K S L R L D R T L M F V V - I - R M . . . . . . 34346 ATTGCGTGTTTAACGAGTTGTTGTATCGGGGGGATTGAAAATTAACTAGTTGTATGTTTT I A C L T S C C I G G I E N - L V V C F L R V - R V V V S G G L K I N - L Y V F Y C V F N E L L Y R G D - K L T S C M F . 34286 TGTAGAT C R V D L - Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (+strand): . . . . . . 34280 ATCTACAAAAACATACAACTAGTTAATTTTCAATCCCCCCGATACAACAACTCGTTAAAC I Y K N I Q L V N F Q S P R Y N N S L N S T K T Y N - L I F N P P D T T T R - T L Q K H T T S - F S I P P I Q Q L V K . . . . . . 34340 ACGCAATACATCCTTCAAATTTAAACAACAAACATGAGCGTCCTATCGAGCCGCAGGCTC T Q Y I L Q I - T T N M S V L S S R R L R N T S F K F K Q Q T - A S Y R A A G S H A I H P S N L N N K H E R P I E P Q A . . . . . . 34400 TTTGGACTCAAGGTGGACTTTTCTAATGGGCCCGACACTCCTTGGGTGTCGGGTCATCTT F G L K V D F S N G P D T P W V S G H L L D S R W T F L M G P T L L G C R V I L L W T Q G G L F - W A R H S L G V G S S . . . . . . 34460 AGGCCAATGCGCTATTTTCGGGATTTGGTTTCGCTCTATCCTAGTTTGACTAAGAGTGGG R P M R Y F R D L V S L Y P S L T K S G G Q C A I F G I W F R S I L V - L R V G - A N A L F S G F G F A L S - F D - E W . . . . . . 34520 TTGTATTTAGAGTGGAATGGGTAACCCAAGCGGACTACTTGGGCTGGAACAATTAACGAT L Y L E W N G - P K R T T W A G T I N D C I - S G M G N P S G L L G L E Q L T I V V F R V E W V T Q A D Y L G W N N - R . . . . . . 34580 CGTTGACTATCAAGTAATCAACTACACTCGTCAGGGTGCCCCGAGAAGATTTTTGGTTAA R - L S S N Q L H S S G C P E K I F G - V D Y Q V I N Y T R Q G A P R R F L V N S L T I K - S T T L V R V P R E D F W L . . . . . . 34640 CGAACGACTGCGAACCCGCATAATCGTCCTTTAGTGGAAATGTAAAAAAGTGTCGTTTGA R T T A N P H N R P L V E M - K S V V - E R L R T R I I V L - W K C K K V S F D T N D C E P A - S S F S G N V K K C R L . . . . . . 34700 CGGAAGTATGTATGCTATGTATGCAGCAGTTTAAAAATCTAAACAATTTAAACATTTAAA R K Y V C Y V C S S L K I - T I - T F K G S M Y A M Y A A V - K S K Q F K H L N T E V C M L C M Q Q F K N L N N L N I - . 34760 CAGTTAA Q L S - T V Maximal non-overlapping open reading frames (>= 64 codons): none AGS-2 (36411 36387,36273 36256,35480 35476,34737 34373) SCR (e 0.840 d 0.000 a 0.735,e 0.722 d 0.000 a 0.998,e 0.600 d 0.000 a 0.982,e 0.792) Exon 1 36411 36387 ( 25 n); score: 0.840 Intron 1 36386 36274 ( 113 n); Pd: 0.000 Pa: 0.735 Exon 2 36273 36256 ( 18 n); score: 0.722 Intron 2 36255 35481 ( 775 n); Pd: 0.000 Pa: 0.998 Exon 3 35480 35476 ( 5 n); score: 0.600 Intron 3 35475 34738 ( 738 n); Pd: 0.000 Pa: 0.982 Exon 4 34737 34373 ( 365 n); score: 0.792 PGS (36411 36387,36273 36256,35480 35476,34737 34373) SGN-E329966+ 3-phase translation of AGS-2 (-strand): . . . : . . : : . 36411 TGTTTATTCTCTATAATGTATTTAT : GCCATCTTTATCTTGGTG : ATTAG : ATTTTTAAACTG C L F S I M Y L : C H L Y L G : D - : I F K L V Y S L - C I Y : A I F I L V : I R : F L N C F I L Y N V F M : P S L S W - : L : D F - T . . . . . . 34725 CTGCATACATAGCATACATACTTCCGTCAAACGACACTTTTTTACATTTCCACTAAAGGA L H T - H T Y F R Q T T L F Y I S T K G C I H S I H T S V K R H F F T F P L K D A A Y I A Y I L P S N D T F L H F H - R . . . . . . 34665 CGATTATGCGGGTTCGCAGTCGTTCGTTAACCAAAAATCTTCTCGGGGCACCCTGACGAG R L C G F A V V R - P K I F S G H P D E D Y A G S Q S F V N Q K S S R G T L T S T I M R V R S R S L T K N L L G A P - R . . . . . . 34605 TGTAGTTGATTACTTGATAGTCAACGATCGTTAATTGTTCCAGCCCAAGTAGTCCGCTTG C S - L L D S Q R S L I V P A Q V V R L V V D Y L I V N D R - L F Q P K - S A W V - L I T - - S T I V N C S S P S S P L . . . . . . 34545 GGTTACCCATTCCACTCTAAATACAACCCACTCTTAGTCAAACTAGGATAGAGCGAAACC G Y P F H S K Y N P L L V K L G - S E T V T H S T L N T T H S - S N - D R A K P G L P I P L - I Q P T L S Q T R I E R N . . . . . . 34485 AAATCCCGAAAATAGCGCATTGGCCTAAGATGACCCGACACCCAAGGAGTGTCGGGCCCA K S R K - R I G L R - P D T Q G V S G P N P E N S A L A - D D P T P K E C R A H Q I P K I A H W P K M T R H P R S V G P . . . . . . 34425 TTAGAAAAGTCCACCTTGAGTCCAAAGAGCCTGCGGCTCGATAGGACGCTCAT L E K S T L S P K S L R L D R T L - K S P P - V Q R A C G S I G R S I R K V H L E S K E P A A R - D A H Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1-_PGL-13_AGS-2_PPS_1 (36395 36387,36273 36256,35480 35476,34737 34572) (frame '2'; 195 bp, 65 residues) 1 CIYAIFILVI RFLNCCIHSI HTSVKRHFFT FPLKDDYAGS QSFVNQKSSR GTLTSVVDYL 61 IVNDR- AGS-3 (35354 34835) SCR (e 0.777) Exon 1 35354 34835 ( 520 n); score: 0.777 PGS (35186 34835) SGN-E238551+ PGS (35186 34835) SGN-E368629+ PGS (34975 34835) SGN-E270562- PGS (35354 34869) SGN-E238621+ PGS (35186 34922) SGN-E235901+ 3-phase translation of AGS-3 (-strand): . . . . . . 35354 TTATCTTATTTTGTTTTCAATGCCGTTAGCTTAGGATTAGGAAACTCCAAACCCTCATCG L S Y F V F N A V S L G L G N S K P S S Y L I L F S M P L A - D - E T P N P H R I L F C F Q C R - L R I R K L Q T L I . . . . . . 35294 AACGCCTGTTATTTTATCAAACCTAAAAAATTTTAAAACTAACTTCTAAATGATAAATTG N A C Y F I K P K K F - N - L L N D K L T P V I L S N L K N F K T N F - M I N C E R L L F Y Q T - K I L K L T S K - - I . . . . . . 35234 TTTCAAATTCGTAAGGCTTGTTTAGATAAAACCTTGAGTAAGCTTAACTTTGAAATGGTT F Q I R K A C L D K T L S K L N F E M V F K F V R L V - I K P - V S L T L K W F V S N S - G L F R - N L E - A - L - N G . . . . . . 35174 TCGTAAACTGGCAAGATAAACAATAAATATTTCAAAATTGGCTAAGTTTGGCTAAGTAAG S - T G K I N N K Y F K I G - V W L S K R K L A R - T I N I S K L A K F G - V S F V N W Q D K Q - I F Q N W L S L A K - . . . . . . 35114 TCATGTTAAAAGTTCAAATAAATTTGCAAAGGTTAAAAATAAAAATAATCAAATAGTTAA S C - K F K - I C K G - K - K - S N S - H V K S S N K F A K V K N K N N Q I V N V M L K V Q I N L Q R L K I K I I K - L . . . . . . 35054 TCATTGGAAAACCGTAAGTTAACGGAGTGTTTTGGGTGCCTTACACCTTCCTAAGATACT S L E N R K L T E C F G C L T P S - D T H W K T V S - R S V L G A L H L P K I L I I G K P - V N G V F W V P Y T F L R Y . . . . . . 34994 AATAGGAATCCCGAACCCTTAAAATGTTTCAAAACAATTTTTTCTGTTTAAGTTGTTTAG N R N P E P L K C F K T I F S V - V V - I G I P N P - N V S K Q F F L F K L F R - - E S R T L K M F Q N N F F C L S C L . . . . . . 34934 AAACGAAGTTTTCTTGATTTTTCTTAAAAATTAAGTGGCGACTCCTAAAAGTCTAAAAAC K R S F L D F S - K L S G D S - K S K N N E V F L I F L K N - V A T P K S L K T E T K F S - F F L K I K W R L L K V - K . . . . 34874 AAACTCTTTTCGAAAATCACCACCCTTTTTCGATAAAACA K L F S K I T T L F R - N N S F R K S P P F F D K T Q T L F E N H H P F S I K Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-3 (+strand): . . . . . . 34835 TGTTTTATCGAAAAAGGGTGGTGATTTTCGAAAAGAGTTTGTTTTTAGACTTTTAGGAGT C F I E K G W - F S K R V C F - T F R S V L S K K G G D F R K E F V F R L L G V F Y R K R V V I F E K S L F L D F - E . . . . . . 34895 CGCCACTTAATTTTTAAGAAAAATCAAGAAAACTTCGTTTCTAAACAACTTAAACAGAAA R H L I F K K N Q E N F V S K Q L K Q K A T - F L R K I K K T S F L N N L N R K S P L N F - E K S R K L R F - T T - T E . . . . . . 34955 AAATTGTTTTGAAACATTTTAAGGGTTCGGGATTCCTATTAGTATCTTAGGAAGGTGTAA K L F - N I L R V R D S Y - Y L R K V - N C F E T F - G F G I P I S I L G R C K K I V L K H F K G S G F L L V S - E G V . . . . . . 35015 GGCACCCAAAACACTCCGTTAACTTACGGTTTTCCAATGATTAACTATTTGATTATTTTT G T Q N T P L T Y G F P M I N Y L I I F A P K T L R - L T V F Q - L T I - L F L R H P K H S V N L R F S N D - L F D Y F . . . . . . 35075 ATTTTTAACCTTTGCAAATTTATTTGAACTTTTAACATGACTTACTTAGCCAAACTTAGC I F N L C K F I - T F N M T Y L A K L S F L T F A N L F E L L T - L T - P N L A Y F - P L Q I Y L N F - H D L L S Q T - . . . . . . 35135 CAATTTTGAAATATTTATTGTTTATCTTGCCAGTTTACGAAACCATTTCAAAGTTAAGCT Q F - N I Y C L S C Q F T K P F Q S - A N F E I F I V Y L A S L R N H F K V K L P I L K Y L L F I L P V Y E T I S K L S . . . . . . 35195 TACTCAAGGTTTTATCTAAACAAGCCTTACGAATTTGAAACAATTTATCATTTAGAAGTT Y S R F Y L N K P Y E F E T I Y H L E V T Q G F I - T S L T N L K Q F I I - K L L L K V L S K Q A L R I - N N L S F R S . . . . . . 35255 AGTTTTAAAATTTTTTAGGTTTGATAAAATAACAGGCGTTCGATGAGGGTTTGGAGTTTC S F K I F - V - - N N R R S M R V W S F V L K F F R F D K I T G V R - G F G V S - F - N F L G L I K - Q A F D E G L E F . . . . 35315 CTAATCCTAAGCTAACGGCATTGAAAACAAAATAAGATAA L I L S - R H - K Q N K I - S - A N G I E N K I R - P N P K L T A L K T K - D Maximal non-overlapping open reading frames (>= 64 codons): none PGL 14 (+ strand): 40860 44425 AGS-1 (40860 41640) SCR (e 0.894) Exon 1 40860 41640 ( 781 n); score: 0.894 PGS (40860 41165) SGN-E337179- PGS (40919 41613) SGN-E340366- PGS (40919 41575) SGN-E540205+ PGS (40919 41497) SGN-E355282- PGS (40919 41465) SGN-E352685- PGS (40919 41438) SGN-E302617+ PGS (40919 41350) SGN-E295156- PGS (40919 41347) SGN-E349926- PGS (40919 41335) SGN-E354307- PGS (40919 41335) SGN-E357558- PGS (40919 41335) SGN-E357673- PGS (40919 41332) SGN-E353160- PGS (40919 41332) SGN-E355505- PGS (40919 41311) SGN-E355527- PGS (40919 41305) SGN-E351103- PGS (40919 41305) SGN-E357512- PGS (40919 41302) SGN-E350942- PGS (40919 41293) SGN-E351796- PGS (40919 41267) SGN-E295085+ PGS (40919 41242) SGN-E349779- PGS (40919 41213) SGN-E299150- PGS (40919 41107) SGN-E310110- PGS (40919 41093) SGN-E350856- PGS (40930 41613) SGN-E212433- PGS (40934 41461) SGN-E212616- PGS (40937 41506) SGN-E350897- PGS (40944 41541) SGN-E212860- PGS (40944 41440) SGN-E548946+ PGS (40944 41377) SGN-E373166- PGS (40944 41377) SGN-E291342- PGS (40944 41377) SGN-E292854- PGS (40944 41377) SGN-E373165+ PGS (40944 41347) SGN-E551414- PGS (40944 41347) SGN-E206005- PGS (40944 41313) SGN-E302004- PGS (40947 41627) SGN-E260562- PGS (40947 41613) SGN-E210798- PGS (40947 41572) SGN-E214128- PGS (40947 41569) SGN-E263617- PGS (40947 41566) SGN-E212205- PGS (40947 41554) SGN-E213837- PGS (40947 41491) SGN-E256630- PGS (40947 41484) SGN-E210944- PGS (40947 41473) SGN-E375347- PGS (40947 41451) SGN-E210719- PGS (40947 41451) SGN-E210726- PGS (40947 41443) SGN-E268624- PGS (40947 41431) SGN-E538599- PGS (40947 41419) SGN-E538598+ PGS (40947 41416) SGN-E353136- PGS (40947 41363) SGN-E396772- PGS (40947 41362) SGN-E398465- PGS (40947 41355) SGN-E357805- PGS (40947 41341) SGN-E206119- PGS (40947 41334) SGN-E357453- PGS (40947 41326) SGN-E353799- PGS (40947 41318) SGN-E390304+ PGS (40947 41290) SGN-E350782- PGS (40947 41275) SGN-E375346+ PGS (40947 41221) SGN-E214114- PGS (40950 41627) SGN-E212978- PGS (40950 41613) SGN-E210966- PGS (40950 41613) SGN-E213606- PGS (40950 41602) SGN-E263607- PGS (40950 41567) SGN-E213536- PGS (40950 41558) SGN-E213897- PGS (40950 41539) SGN-E258673- PGS (40950 41473) SGN-E211610- PGS (40958 41238) SGN-E260107- PGS (40963 41473) SGN-E204787- PGS (40963 41461) SGN-E200099- PGS (40964 41560) SGN-E253886- PGS (40965 41562) SGN-E253452- PGS (40968 41610) SGN-E276677- PGS (40968 41610) SGN-E209968- PGS (40968 41560) SGN-E254383- PGS (40973 41573) SGN-E303865- PGS (40982 41627) SGN-E294134- PGS (40982 41613) SGN-E302616- PGS (40982 41613) SGN-E251623- PGS (40982 41592) SGN-E256710- PGS (40983 41640) SGN-E214263- PGS (40983 41627) SGN-E211803- PGS (40983 41618) SGN-E211072- PGS (40983 41613) SGN-E213091- PGS (40983 41598) SGN-E211417- PGS (40983 41446) SGN-E201711- PGS (40984 41622) SGN-E335205- PGS (40986 41627) SGN-E212383- PGS (40986 41623) SGN-E305774- PGS (40986 41578) SGN-E303485- PGS (40989 41617) SGN-E276027- PGS (40989 41612) SGN-E307742- PGS (40989 41592) SGN-E255554- PGS (41000 41463) SGN-E354546- PGS (41019 41632) SGN-E209843- PGS (41024 41551) SGN-E336261- PGS (41028 41608) SGN-E211899- PGS (41043 41632) SGN-E207039- PGS (41045 41632) SGN-E543853- PGS (41048 41623) SGN-E268610- PGS (41067 41627) SGN-E273742- PGS (41075 41625) SGN-E210488- PGS (41075 41612) SGN-E206152- PGS (41084 41617) SGN-E288509- PGS (41085 41619) SGN-E275948- PGS (41085 41539) SGN-E253792- PGS (41086 41526) SGN-E208167- PGS (41088 41628) SGN-E215146- PGS (41088 41617) SGN-E206874- PGS (41088 41610) SGN-E208900- PGS (41088 41586) SGN-E335641- PGS (41088 41578) SGN-E209439- PGS (41088 41567) SGN-E311822- PGS (41088 41559) SGN-E334899- PGS (41088 41497) SGN-E273584- PGS (41094 41627) SGN-E250262- PGS (41095 41610) SGN-E274937- PGS (41095 41484) SGN-E205109- PGS (41097 41626) SGN-E275676- PGS (41097 41617) SGN-E274932- PGS (41097 41602) SGN-E252003- PGS (41097 41514) SGN-E204875- PGS (41101 41566) SGN-E266663- PGS (41104 41627) SGN-E246947- PGS (41110 41632) SGN-E304108- PGS (41112 41628) SGN-E214938- PGS (41112 41567) SGN-E203662- PGS (41121 41610) SGN-E204618- PGS (41121 41587) SGN-E202224- PGS (41123 41558) SGN-E206535- PGS (41124 41624) SGN-E274566- PGS (41124 41610) SGN-E209259- PGS (41126 41618) SGN-E205594- PGS (41126 41578) SGN-E205290- PGS (41127 41638) SGN-E207077- PGS (41130 41602) SGN-E250954- PGS (41149 41539) SGN-E201143- PGS (41150 41640) SGN-E205046- PGS (41151 41627) SGN-E202164- PGS (41151 41613) SGN-E264072- PGS (41163 41637) SGN-E202521- PGS (41163 41608) SGN-E203940- PGS (41172 41637) SGN-E208115- PGS (41172 41627) SGN-E205100- PGS (41172 41590) SGN-E205056- PGS (41172 41558) SGN-E207079- PGS (41184 41627) SGN-E208277- PGS (41184 41608) SGN-E276456- PGS (41185 41629) SGN-E200871- PGS (41185 41617) SGN-E200039- PGS (41185 41613) SGN-E210426- PGS (41185 41603) SGN-E338892- PGS (41188 41613) SGN-E256174- PGS (41188 41595) SGN-E208827- PGS (41199 41627) SGN-E207769- PGS (41199 41614) SGN-E201442- PGS (41199 41607) SGN-E336913- PGS (41216 41558) SGN-E200631- PGS (41220 41614) SGN-E204939- PGS (41223 41610) SGN-E210135- PGS (41226 41572) SGN-E278209- PGS (41235 41499) SGN-E210564- PGS (41244 41625) SGN-E338707- PGS (41244 41622) SGN-E337746- PGS (41246 41603) SGN-E336810- PGS (41252 41613) SGN-E200826- PGS (41301 41613) SGN-E205710- PGS (41315 41613) SGN-E205598- PGS (41319 41614) SGN-E209515- PGS (41325 41613) SGN-E249666- PGS (41340 41628) SGN-E390089- PGS (41342 41536) SGN-E335140- PGS (41351 41605) SGN-E264435- PGS (41370 41627) SGN-E263895- PGS (41376 41568) SGN-E335797- PGS (41379 41634) SGN-E255362- PGS (41398 41617) SGN-E200076- 3-phase translation of AGS-1 (+strand): . . . . . . 40860 CAGACCGTTTAAGATGCTTATTATTTTGGTAATTTTTTCATACCATTCAATTTGTAGCAA Q T V - D A Y Y F G N F F I P F N L - Q R P F K M L I I L V I F S Y H S I C S K D R L R C L L F W - F F H T I Q F V A . . . . . . 40920 AATATGCTTTATTGTGGCATCAATTATGGGCAAAAAACAACCCTATAATTTGTACTACCA N M L Y C G I N Y G Q K T T L - F V L P I C F I V A S I M G K K Q P Y N L Y Y H K Y A L L W H Q L W A K N N P I I C T T . . . . . . 40980 CTAGGGCAAGTGAATAAGCTAGTAGGATCATCTTGAGGGTAGCTATACGCATTAGGGCAC L G Q V N K L V G S S - G - L Y A L G H - G K - I S - - D H L E G S Y T H - G T T R A S E - A S R I I L R V A I R I R A . . . . . . 41040 CTTTGTTTGAAAAATCTCGAAAATTTTGTAGGACCACATGGGCCTTGAGTACAACAATAT L C L K N L E N F V G P H G P - V Q Q Y F V - K I S K I L - D H M G L E Y N N I P L F E K S R K F C R T T W A L S T T I . . . . . . 41100 TGTTGTCCTCCGAACGTGGTACAAGGGTTGTTACATCCTCCGGGTACCCTAAGTGGACTA C C P P N V V Q G L L H P P G T L S G L V V L R T W Y K G C Y I L R V P - V D - L L S S E R G T R V V T S S G Y P K W T . . . . . . 41160 GGGCATTCACCGTTTATATTAGCCGTGCAATGAATTGCATGGCATTTTCCTCCACTAGGA G H S P F I L A V Q - I A W H F P P L G G I H R L Y - P C N E L H G I F L H - D R A F T V Y I S R A M N C M A F S S T R . . . . . . 41220 TTGGTTGGGGCGAAAGTCATCGGTATATTAAATCCGTCAACCAAAGAAATGTCCCAGAAA L V G A K V I G I L N P S T K E M S Q K W L G R K S S V Y - I R Q P K K C P R N I G W G E S H R Y I K S V N Q R N V P E . . . . . . 41280 TCTAGGTTGCTGAATTGGTCCAAAGCATATTCAGCTAGGGTGTTTGGGGGTTTGCCCCAC S R L L N W S K A Y S A R V F G G L P H L G C - I G P K H I Q L G C L G V C P T I - V A E L V Q S I F S - G V W G F A P . . . . . . 41340 CCGGTACAGTGTAGGACCCCACCACAATCACCAGTTTGGCATGAACCTCTACCAGCACCA P V Q C R T P P Q S P V W H E P L P A P R Y S V G P H H N H Q F G M N L Y Q H H P G T V - D P T T I T S L A - T S T S T . . . . . . 41400 TTAAAATTGCAATTAGTACGACCCCATATACGTGCCATCTTAGTGCCCCTCGGCGCATTG L K L Q L V R P H I R A I L V P L G A L - N C N - Y D P I Y V P S - C P S A H - I K I A I S T T P Y T C H L S A P R R I . . . . . . 41460 ATGACCCATGTTTGGCCTCGATCGAGACGTCGACCACCGCCTATCGGGGTCGATGCTGCC M T H V W P R S R R R P P P I G V D A A - P M F G L D R D V D H R L S G S M L P D D P C L A S I E T S T T A Y R G R C C . . . . . . 41520 CAAACGGTGTAGGGACAATTGTTGCGTACCTCGATAGTGGCAGCATAAGTGTAAGTCACT Q T V - G Q L L R T S I V A A - V - V T K R C R D N C C V P R - W Q H K C K S L P N G V G T I V A Y L D S G S I S V S H . . . . . . 41580 AAAGCAAGGAAGAAGAAAATAAAAGAAGATGTCAAGTAGCCCATGTTTGTGTACATATTT K A R K K K I K E D V K - P M F V Y I F K Q G R R K - K K M S S S P C L C T Y F - S K E E E N K R R C Q V A H V C V H I . 41640 T Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1+_PGL-14_AGS-1_PPS_1 (41193 41531) (frame '1'; 336 bp, 112 residues) 1 IAWHFPPLGL VGAKVIGILN PSTKEMSQKS RLLNWSKAYS ARVFGGLPHP VQCRTPPQSP 61 VWHEPLPAPL KLQLVRPHIR AILVPLGALM THVWPRSRRR PPPIGVDAAQ TV- 3-phase translation of AGS-1 (-strand): . . . . . . 41640 AAAATATGTACACAAACATGGGCTACTTGACATCTTCTTTTATTTTCTTCTTCCTTGCTT K I C T Q T W A T - H L L L F S S S L L K Y V H K H G L L D I F F Y F L L P C F N M Y T N M G Y L T S S F I F F F L A . . . . . . 41580 TAGTGACTTACACTTATGCTGCCACTATCGAGGTACGCAACAATTGTCCCTACACCGTTT - - L T L M L P L S R Y A T I V P T P F S D L H L C C H Y R G T Q Q L S L H R L L V T Y T Y A A T I E V R N N C P Y T V . . . . . . 41520 GGGCAGCATCGACCCCGATAGGCGGTGGTCGACGTCTCGATCGAGGCCAAACATGGGTCA G Q H R P R - A V V D V S I E A K H G S G S I D P D R R W S T S R S R P N M G H W A A S T P I G G G R R L D R G Q T W V . . . . . . 41460 TCAATGCGCCGAGGGGCACTAAGATGGCACGTATATGGGGTCGTACTAATTGCAATTTTA S M R R G A L R W H V Y G V V L I A I L Q C A E G H - D G T Y M G S Y - L Q F - I N A P R G T K M A R I W G R T N C N F . . . . . . 41400 ATGGTGCTGGTAGAGGTTCATGCCAAACTGGTGATTGTGGTGGGGTCCTACACTGTACCG M V L V E V H A K L V I V V G S Y T V P W C W - R F M P N W - L W W G P T L Y R N G A G R G S C Q T G D C G G V L H C T . . . . . . 41340 GGTGGGGCAAACCCCCAAACACCCTAGCTGAATATGCTTTGGACCAATTCAGCAACCTAG G G A N P Q T P - L N M L W T N S A T - V G Q T P K H P S - I C F G P I Q Q P R G W G K P P N T L A E Y A L D Q F S N L . . . . . . 41280 ATTTCTGGGACATTTCTTTGGTTGACGGATTTAATATACCGATGACTTTCGCCCCAACCA I S G T F L W L T D L I Y R - L S P Q P F L G H F F G - R I - Y T D D F R P N Q D F W D I S L V D G F N I P M T F A P T . . . . . . 41220 ATCCTAGTGGAGGAAAATGCCATGCAATTCATTGCACGGCTAATATAAACGGTGAATGCC I L V E E N A M Q F I A R L I - T V N A S - W R K M P C N S L H G - Y K R - M P N P S G G K C H A I H C T A N I N G E C . . . . . . 41160 CTAGTCCACTTAGGGTACCCGGAGGATGTAACAACCCTTGTACCACGTTCGGAGGACAAC L V H L G Y P E D V T T L V P R S E D N - S T - G T R R M - Q P L Y H V R R T T P S P L R V P G G C N N P C T T F G G Q . . . . . . 41100 AATATTGTTGTACTCAAGGCCCATGTGGTCCTACAAAATTTTCGAGATTTTTCAAACAAA N I V V L K A H V V L Q N F R D F S N K I L L Y S R P M W S Y K I F E I F Q T K Q Y C C T Q G P C G P T K F S R F F K Q . . . . . . 41040 GGTGCCCTAATGCGTATAGCTACCCTCAAGATGATCCTACTAGCTTATTCACTTGCCCTA G A L M R I A T L K M I L L A Y S L A L V P - C V - L P S R - S Y - L I H L P - R C P N A Y S Y P Q D D P T S L F T C P . . . . . . 40980 GTGGTAGTACAAATTATAGGGTTGTTTTTTGCCCATAATTGATGCCACAATAAAGCATAT V V V Q I I G L F F A H N - C H N K A Y W - Y K L - G C F L P I I D A T I K H I S G S T N Y R V V F C P - L M P Q - S I . . . . . . 40920 TTTGCTACAAATTGAATGGTATGAAAAAATTACCAAAATAATAAGCATCTTAAACGGTCT F A T N - M V - K N Y Q N N K H L K R S L L Q I E W Y E K I T K I I S I L N G L F C Y K L N G M K K L P K - - A S - T V . 40860 G Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1-_PGL-14_AGS-1_PPS_1 (41638 40943) (frame '0'; 693 bp, 231 residues) 1 NMYTNMGYLT SSFIFFFLAL VTYTYAATIE VRNNCPYTVW AASTPIGGGR RLDRGQTWVI 61 NAPRGTKMAR IWGRTNCNFN GAGRGSCQTG DCGGVLHCTG WGKPPNTLAE YALDQFSNLD 121 FWDISLVDGF NIPMTFAPTN PSGGKCHAIH CTANINGECP SPLRVPGGCN NPCTTFGGQQ 181 YCCTQGPCGP TKFSRFFKQR CPNAYSYPQD DPTSLFTCPS GSTNYRVVFC P- AGS-2 (40947 40984,43278 43786) SCR (e 0.895 d 0.925 a 0.758,e 0.889) Exon 1 40947 40984 ( 38 n); score: 0.895 Intron 1 40985 43277 (2293 n); Pd: 0.925 Pa: 0.758 Exon 2 43278 43786 ( 509 n); score: 0.889 PGS (40947 40984,43278 43683) SGN-E252885- PGS (40947 40984,43278 43670) SGN-E274671- PGS (40947 40984,43278 43670) SGN-E276802- PGS (40947 40984,43278 43656) SGN-E209133- PGS (40947 40984,43278 43602) SGN-E263405+ PGS (40947 40984,43278 43602) SGN-E213158+ PGS (40947 40984,43278 43599) SGN-E255494- PGS (40947 40984,43278 43597) SGN-E274599- PGS (40947 40984,43278 43590) SGN-E213028+ PGS (40947 40984,43278 43558) SGN-E356290- PGS (40947 40984,43278 43558) SGN-E351033- PGS (40947 40984,43278 43530) SGN-E254748- PGS (40947 40984,43278 43502) SGN-E356548- PGS (40947 40984,43278 43467) SGN-E298580+ PGS (40947 40984,43278 43467) SGN-E276361+ PGS (40947 40984,43278 43430) SGN-E261117+ PGS (43257 43767) SGN-E204787- PGS (43257 43755) SGN-E200099- PGS (43257 43670) SGN-E275197- PGS (43258 43781) SGN-E253886- PGS (43258 43663) SGN-E206043- PGS (43258 43582) SGN-E207626- PGS (43259 43781) SGN-E253452- PGS (43262 43781) SGN-E209968- PGS (43262 43781) SGN-E276677- PGS (43262 43781) SGN-E254383- PGS (43267 43781) SGN-E303865- PGS (43276 43781) SGN-E294134- PGS (43276 43781) SGN-E302616- PGS (43276 43781) SGN-E251623- PGS (43276 43781) SGN-E256710- PGS (43277 43781) SGN-E211803- PGS (43277 43781) SGN-E211417- PGS (43277 43781) SGN-E211072- PGS (43277 43781) SGN-E213091- PGS (43277 43740) SGN-E201711- PGS (43278 43781) SGN-E212978- PGS (43278 43781) SGN-E213897- PGS (43278 43781) SGN-E214263- PGS (43278 43781) SGN-E335205- PGS (43280 43781) SGN-E303485- PGS (43280 43781) SGN-E212383- PGS (43280 43781) SGN-E305774- PGS (43285 43781) SGN-E255554- PGS (43285 43781) SGN-E307742- PGS (43285 43781) SGN-E276027- PGS (43285 43704) SGN-E203547- PGS (43285 43649) SGN-E301453- PGS (43294 43756) SGN-E354546- PGS (43296 43683) SGN-E206738- PGS (43313 43781) SGN-E209843- PGS (43318 43781) SGN-E336261- PGS (43318 43600) SGN-E258498- PGS (43319 43582) SGN-E251433- PGS (43322 43781) SGN-E211899- PGS (43337 43781) SGN-E207039- PGS (43342 43781) SGN-E268610- PGS (43361 43781) SGN-E273742- PGS (43369 43781) SGN-E206152- PGS (43369 43781) SGN-E210488- PGS (43378 43781) SGN-E288509- PGS (43379 43781) SGN-E275948- PGS (43379 43781) SGN-E253792- PGS (43380 43781) SGN-E208900- PGS (43381 43786) SGN-E273584- PGS (43381 43781) SGN-E215146- PGS (43381 43781) SGN-E206874- PGS (43381 43781) SGN-E311822- PGS (43381 43781) SGN-E209439- PGS (43382 43781) SGN-E334899- PGS (43382 43781) SGN-E335641- PGS (43382 43741) SGN-E208167- PGS (43388 43781) SGN-E250262- PGS (43389 43781) SGN-E274937- PGS (43389 43778) SGN-E205109- PGS (43391 43781) SGN-E204875- PGS (43391 43781) SGN-E252003- PGS (43391 43781) SGN-E274932- PGS (43391 43781) SGN-E275676- PGS (43395 43781) SGN-E266663- PGS (43398 43781) SGN-E246947- PGS (43401 43750) SGN-E275799- PGS (43405 43781) SGN-E203662- PGS (43405 43781) SGN-E214938- PGS (43406 43781) SGN-E304108- PGS (43415 43781) SGN-E204618- PGS (43417 43781) SGN-E206535- PGS (43418 43781) SGN-E209259- PGS (43420 43781) SGN-E207077- PGS (43421 43781) SGN-E205594- PGS (43421 43781) SGN-E205290- PGS (43424 43781) SGN-E250954- PGS (43443 43781) SGN-E201143- PGS (43444 43781) SGN-E205046- PGS (43445 43781) SGN-E264072- PGS (43445 43781) SGN-E202164- PGS (43457 43781) SGN-E202521- PGS (43457 43781) SGN-E203940- PGS (43466 43781) SGN-E205056- PGS (43466 43781) SGN-E205100- PGS (43466 43781) SGN-E208115- PGS (43466 43781) SGN-E207079- PGS (43478 43781) SGN-E276456- PGS (43478 43781) SGN-E208277- PGS (43479 43781) SGN-E338892- PGS (43479 43781) SGN-E200039- PGS (43479 43781) SGN-E210426- PGS (43479 43781) SGN-E200871- PGS (43484 43781) SGN-E256174- PGS (43484 43781) SGN-E208827- PGS (43492 43781) SGN-E336913- PGS (43492 43781) SGN-E207769- PGS (43492 43781) SGN-E201442- PGS (43514 43781) SGN-E204939- PGS (43517 43781) SGN-E210135- PGS (43522 43781) SGN-E278209- PGS (43529 43786) SGN-E210564- PGS (43538 43781) SGN-E337746- PGS (43538 43781) SGN-E338707- PGS (43540 43781) SGN-E336810- 3-phase translation of AGS-2 (+strand): . . . . : . . 40947 GGGCAAAAAACAACCCTATAATTTGTACTACCACTAGG : GGCAAGCAAATGTGCTAGTAGC G Q K T T L - F V L P L G : A S K C A S S G K K Q P Y N L Y Y H - : G Q A N V L V A A K N N P I I C T T T R : G K Q M C - - . . . . . . 43300 ATCATCTTGTGGGTAGCTATAGGCATCAGGGCATCTCTGTTTGAAAAATTTCGACCACTC I I L W V A I G I R A S L F E K F R P L S S C G - L - A S G H L C L K N F D H S H H L V G S Y R H Q G I S V - K I S T T . . . . . . 43360 AGTAGGACTACATGGACCTTGGGTGCAACAATATTGTTGTCCTCCAAACGTGGTACAAGG S R T T W T L G A T I L L S S K R G T R V G L H G P W V Q Q Y C C P P N V V Q G Q - D Y M D L G C N N I V V L Q T W Y K . . . . . . 43420 ATTGTTACATCCTCCGGTTACTTTAAGTTGACTAGGGCATTCACCGTTTATATTGGCGGT I V T S S G Y F K L T R A F T V Y I G G L L H P P V T L S - L G H S P F I L A V D C Y I L R L L - V D - G I H R L Y W R . . . . . . 43480 GCATTGAATTGAGTGGCATTTTCCTCCACTGGAATTGGTTGTGGCGAAAGTCATCGGTAT A L N - V A F S S T G I G C G E S H R Y H - I E W H F P P L E L V V A K V I G I C I E L S G I F L H W N W L W R K S S V . . . . . . 43540 ATTAAATCCATCGACTAAAGAAATGTCCCAGAAATCTAGGTTGTTAAACTGGTTCAAGGC I K S I D - R N V P E I - V V K L V Q G L N P S T K E M S Q K S R L L N W F K A Y - I H R L K K C P R N L G C - T G S R . . . . . . 43600 GTATTCGGTCAAGGTGTTTGGCGGTTTACCCCACCCGGTACACTGCAAGACTCCACCACA V F G Q G V W R F T P P G T L Q D S T T Y S V K V F G G L P H P V H C K T P P Q R I R S R C L A V Y P T R Y T A R L H H . . . . . . 43660 ATCACCAGTCTCACAAGAACCTCTACCAGCACCGTCAAAGTTGCATTTAGTACGACCCCA I T S L T R T S T S T V K V A F S T T P S P V S Q E P L P A P S K L H L V R P H N H Q S H K N L Y Q H R Q S C I - Y D P . . . . . . 43720 TATACGTGCCATCTTAGTGCCCCTCAGTGCATTGATGGTCCAAGTCTGGCCTTGATTGAG Y T C H L S A P Q C I D G P S L A L I E I R A I L V P L S A L M V Q V W P - L R I Y V P S - C P S V H - W S K S G L D - . 43780 ACGTTGA T L R - D V Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1+_PGL-14_AGS-2_PPS_1 (43487 43774) (frame '2'; 285 bp, 95 residues) 1 IEWHFPPLEL VVAKVIGILN PSTKEMSQKS RLLNWFKAYS VKVFGGLPHP VHCKTPPQSP 61 VSQEPLPAPS KLHLVRPHIR AILVPLSALM VQVWP- >C08HBa0235H18.1+_PGL-14_AGS-2_PPS_2 (40968 40984,43278 43491) (frame '1'; 228 bp, 76 residues) 1 FVLPLGASKC ASSIILWVAI GIRASLFEKF RPLSRTTWTL GATILLSSKR GTRIVTSSGY 61 FKLTRAFTVY IGGALN- AGS-3 (42396 42417,44024 44425) SCR (e 0.773 d 0.000 a 0.000,e 0.728) Exon 1 42396 42417 ( 22 n); score: 0.773 Intron 1 42418 44023 (1606 n); Pd: 0.000 Pa: 0.000 Exon 2 44024 44425 ( 402 n); score: 0.728 PGS (42396 42417,44024 44264) SGN-E238551- PGS (42396 42417,44024 44264) SGN-E368629- PGS (44024 44425) SGN-E238621- PGS (44046 44264) SGN-E235901- 3-phase translation of AGS-3 (+strand): . . . : . . . 42396 AAAACAGGTTTAACTGATAAAG : TTGTTTTGAAACATTTTAAGGGTTCGGGATTCCTATTA K T G L T D K : V V L K H F K G S G F L L K Q V - L I K : L F - N I L R V R D S Y - N R F N - - S : C F E T F - G F G I P I . . . . . . 44062 GTATCTTAGGAAGGTGTAAGGCACCCAAAACACTCCGTTAACTTACGGTTTTCCAATGAT V S - E G V R H P K H S V N L R F S N D Y L R K V - G T Q N T P L T Y G F P M I S I L G R C K A P K T L R - L T V F Q - . . . . . . 44122 TAACTATTTGATTATTTTTATTTTTAACCTTTGCAAATTTATTTGAACTTTTAACATGAC - L F D Y F Y F - P L Q I Y L N F - H D N Y L I I F I F N L C K F I - T F N M T L T I - L F L F L T F A N L F E L L T - . . . . . . 44182 TTACTTAGCCAAACTTAGCCAATTTTGAAATATTTATTGTTTATCTTGCCAGTTTACGAA L L S Q T - P I L K Y L L F I L P V Y E Y L A K L S Q F - N I Y C L S C Q F T K L T - P N L A N F E I F I V Y L A S L R . . . . . . 44242 ACCATTTCAAAGTTAAGCTTACTCAAGGTTTTATCTAAACAAGCCTTACGAATTTGAAAC T I S K L S L L K V L S K Q A L R I - N P F Q S - A Y S R F Y L N K P Y E F E T N H F K V K L T Q G F I - T S L T N L K . . . . . . 44302 AATTTATCATTTAGAAGTTAGTTTTAAAAATTTTTAGGTTTGATAAAATAACAGGCGTTC N L S F R S - F - K F L G L I K - Q A F I Y H L E V S F K N F - V - - N N R R S Q F I I - K L V L K I F R F D K I T G V . . . . . . 44362 GATGAGGGTTTGGAGTTTCCTAATCCTAAGCTTACGGCATTGAAAACAAAATAAGATAAG D E G L E F P N P K L T A L K T K - D K M R V W S F L I L S L R H - K Q N K I S R - G F G V S - S - A Y G I E N K I R - . 44422 CAAA Q K A Maximal non-overlapping open reading frames (>= 64 codons): none AGS-4 (43156 43781) SCR (e 0.844) Exon 1 43156 43781 ( 626 n); score: 0.844 PGS (43156 43459) SGN-E337179- PGS (43224 43781) SGN-E212433- PGS (43241 43781) SGN-E256630- PGS (43244 43781) SGN-E213536- PGS (43244 43781) SGN-E213606- 3-phase translation of AGS-4 (+strand): . . . . . . 43156 ACCTTTTAAGATACTTATTGTTTTGGTAATTTTTCATACCATATAATTTGTAGCAAAATA T F - D T Y C F G N F S Y H I I C S K I P F K I L I V L V I F H T I - F V A K Y L L R Y L L F W - F F I P Y N L - Q N . . . . . . 43216 TGCTTTATATTGTGGCATTAATTATGGGCAAAAAACAACCTTATAATTTGTACTATCACT C F I L W H - L W A K N N L I I C T I T A L Y C G I N Y G Q K T T L - F V L S L M L Y I V A L I M G K K Q P Y N L Y Y H . . . . . . 43276 AGGGCAAGCAAATGTGCTAGTAGCATCATCTTGTGGGTAGCTATAGGCATCAGGGCATCT R A S K C A S S I I L W V A I G I R A S G Q A N V L V A S S C G - L - A S G H L - G K Q M C - - H H L V G S Y R H Q G I . . . . . . 43336 CTGTTTGAAAAATTTCGACCACTCAGTAGGACTACATGGACCTTGGGTGCAACAATATTG L F E K F R P L S R T T W T L G A T I L C L K N F D H S V G L H G P W V Q Q Y C S V - K I S T T Q - D Y M D L G C N N I . . . . . . 43396 TTGTCCTCCAAACGTGGTACAAGGATTGTTACATCCTCCGGTTACTTTAAGTTGACTAGG L S S K R G T R I V T S S G Y F K L T R C P P N V V Q G L L H P P V T L S - L G V V L Q T W Y K D C Y I L R L L - V D - . . . . . . 43456 GCATTCACCGTTTATATTGGCGGTGCATTGAATTGAGTGGCATTTTCCTCCACTGGAATT A F T V Y I G G A L N - V A F S S T G I H S P F I L A V H - I E W H F P P L E L G I H R L Y W R C I E L S G I F L H W N . . . . . . 43516 GGTTGTGGCGAAAGTCATCGGTATATTAAATCCATCGACTAAAGAAATGTCCCAGAAATC G C G E S H R Y I K S I D - R N V P E I V V A K V I G I L N P S T K E M S Q K S W L W R K S S V Y - I H R L K K C P R N . . . . . . 43576 TAGGTTGTTAAACTGGTTCAAGGCGTATTCGGTCAAGGTGTTTGGCGGTTTACCCCACCC - V V K L V Q G V F G Q G V W R F T P P R L L N W F K A Y S V K V F G G L P H P L G C - T G S R R I R S R C L A V Y P T . . . . . . 43636 GGTACACTGCAAGACTCCACCACAATCACCAGTCTCACAAGAACCTCTACCAGCACCGTC G T L Q D S T T I T S L T R T S T S T V V H C K T P P Q S P V S Q E P L P A P S R Y T A R L H H N H Q S H K N L Y Q H R . . . . . . 43696 AAAGTTGCATTTAGTACGACCCCATATACGTGCCATCTTAGTGCCCCTCAGTGCATTGAT K V A F S T T P Y T C H L S A P Q C I D K L H L V R P H I R A I L V P L S A L M Q S C I - Y D P I Y V P S - C P S V H - . . . 43756 GGTCCAAGTCTGGCCTTGATTGAGAC G P S L A L I E V Q V W P - L R W S K S G L D - D Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1+_PGL-14_AGS-4_PPS_1 (43487 43774) (frame '2'; 285 bp, 95 residues) 1 IEWHFPPLEL VVAKVIGILN PSTKEMSQKS RLLNWFKAYS VKVFGGLPHP VHCKTPPQSP 61 VSQEPLPAPS KLHLVRPHIR AILVPLSALM VQVWP- >C08HBa0235H18.1+_PGL-14_AGS-4_PPS_2 (43237 43491) (frame '1'; 252 bp, 84 residues) 1 LWAKNNLIIC TITRASKCAS SIILWVAIGI RASLFEKFRP LSRTTWTLGA TILLSSKRGT 61 RIVTSSGYFK LTRAFTVYIG GALN- 3-phase translation of AGS-4 (-strand): . . . . . . 43781 GTCTCAATCAAGGCCAGACTTGGACCATCAATGCACTGAGGGGCACTAAGATGGCACGTA V S I K A R L G P S M H - G A L R W H V S Q S R P D L D H Q C T E G H - D G T Y L N Q G Q T W T I N A L R G T K M A R . . . . . . 43721 TATGGGGTCGTACTAAATGCAACTTTGACGGTGCTGGTAGAGGTTCTTGTGAGACTGGTG Y G V V L N A T L T V L V E V L V R L V M G S Y - M Q L - R C W - R F L - D W - I W G R T K C N F D G A G R G S C E T G . . . . . . 43661 ATTGTGGTGGAGTCTTGCAGTGTACCGGGTGGGGTAAACCGCCAAACACCTTGACCGAAT I V V E S C S V P G G V N R Q T P - P N L W W S L A V Y R V G - T A K H L D R I D C G G V L Q C T G W G K P P N T L T E . . . . . . 43601 ACGCCTTGAACCAGTTTAACAACCTAGATTTCTGGGACATTTCTTTAGTCGATGGATTTA T P - T S L T T - I S G T F L - S M D L R L E P V - Q P R F L G H F F S R W I - Y A L N Q F N N L D F W D I S L V D G F . . . . . . 43541 ATATACCGATGACTTTCGCCACAACCAATTCCAGTGGAGGAAAATGCCACTCAATTCAAT I Y R - L S P Q P I P V E E N A T Q F N Y T D D F R H N Q F Q W R K M P L N S M N I P M T F A T T N S S G G K C H S I Q . . . . . . 43481 GCACCGCCAATATAAACGGTGAATGCCCTAGTCAACTTAAAGTAACCGGAGGATGTAACA A P P I - T V N A L V N L K - P E D V T H R Q Y K R - M P - S T - S N R R M - Q C T A N I N G E C P S Q L K V T G G C N . . . . . . 43421 ATCCTTGTACCACGTTTGGAGGACAACAATATTGTTGCACCCAAGGTCCATGTAGTCCTA I L V P R L E D N N I V A P K V H V V L S L Y H V W R T T I L L H P R S M - S Y N P C T T F G G Q Q Y C C T Q G P C S P . . . . . . 43361 CTGAGTGGTCGAAATTTTTCAAACAGAGATGCCCTGATGCCTATAGCTACCCACAAGATG L S G R N F S N R D A L M P I A T H K M - V V E I F Q T E M P - C L - L P T R - T E W S K F F K Q R C P D A Y S Y P Q D . . . . . . 43301 ATGCTACTAGCACATTTGCTTGCCCTAGTGATAGTACAAATTATAAGGTTGTTTTTTGCC M L L A H L L A L V I V Q I I R L F F A C Y - H I C L P - - - Y K L - G C F L P D A T S T F A C P S D S T N Y K V V F C . . . . . . 43241 CATAATTAATGCCACAATATAAAGCATATTTTGCTACAAATTATATGGTATGAAAAATTA H N - C H N I K H I L L Q I I W Y E K L I I N A T I - S I F C Y K L Y G M K N Y P - L M P Q Y K A Y F A T N Y M V - K I . . . 43181 CCAAAACAATAAGTATCTTAAAAGGT P K Q - V S - K Q N N K Y L K R T K T I S I L K G Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1-_PGL-14_AGS-4_PPS_1 (43779 43237) (frame '0'; 540 bp, 180 residues) 1 LNQGQTWTIN ALRGTKMARI WGRTKCNFDG AGRGSCETGD CGGVLQCTGW GKPPNTLTEY 61 ALNQFNNLDF WDISLVDGFN IPMTFATTNS SGGKCHSIQC TANINGECPS QLKVTGGCNN 121 PCTTFGGQQY CCTQGPCSPT EWSKFFKQRC PDAYSYPQDD ATSTFACPSD STNYKVVFCP 181 - PGL 15 (+ strand): 46874 47131 AGS-1 (46874 47131) SCR (e 0.924) Exon 1 46874 47131 ( 258 n); score: 0.924 PGS (46874 47128) SGN-E211803+ PGS (46874 47128) SGN-E211899+ PGS (46874 47128) SGN-E211417+ PGS (46874 47128) SGN-E210798+ PGS (46874 47128) SGN-E250954+ PGS (46874 47128) SGN-E210966+ PGS (46874 47128) SGN-E211072+ PGS (46874 47128) SGN-E340366+ PGS (46874 47128) SGN-E263607+ PGS (46874 47128) SGN-E213091+ PGS (46874 47128) SGN-E302616+ PGS (46874 47128) SGN-E212978+ PGS (46874 47128) SGN-E264072+ PGS (46874 47128) SGN-E335205+ PGS (46874 47128) SGN-E212433+ PGS (46874 47128) SGN-E303865+ PGS (46874 47128) SGN-E212383+ PGS (46874 47128) SGN-E204618+ PGS (46874 47128) SGN-E250262+ PGS (46874 47128) SGN-E213606+ PGS (46874 47128) SGN-E205046+ PGS (46874 47128) SGN-E255554+ PGS (46874 47128) SGN-E214263+ PGS (46874 47128) SGN-E214938+ PGS (46874 47128) SGN-E215146+ PGS (46874 47128) SGN-E252003+ PGS (46874 47128) SGN-E251623+ PGS (46874 47128) SGN-E202164+ PGS (46874 47128) SGN-E205594+ PGS (46874 47128) SGN-E307742+ PGS (46874 47128) SGN-E214128+ PGS (46874 47128) SGN-E205290+ PGS (46874 47128) SGN-E335641+ PGS (46874 47128) SGN-E275948+ PGS (46874 47128) SGN-E206152+ PGS (46874 47128) SGN-E276027+ PGS (46874 47128) SGN-E207077+ PGS (46874 47128) SGN-E276677+ PGS (46874 47128) SGN-E256710+ PGS (46874 47128) SGN-E274932+ PGS (46874 47128) SGN-E274937+ PGS (46874 47128) SGN-E206874+ PGS (46874 47128) SGN-E246947+ PGS (46874 47128) SGN-E355282+ PGS (46874 47128) SGN-E275676+ PGS (46874 47128) SGN-E210564+ PGS (46874 47128) SGN-E210488+ PGS (46874 47128) SGN-E273584+ PGS (46874 47128) SGN-E273742+ PGS (46874 47128) SGN-E288509+ PGS (46874 47128) SGN-E209968+ PGS (46874 47128) SGN-E208900+ PGS (46874 47128) SGN-E209439+ PGS (46874 47128) SGN-E209259+ PGS (46874 47128) SGN-E260562+ PGS (46874 47128) SGN-E294134+ PGS (46874 47128) SGN-E540205- PGS (46874 47120) SGN-E202521+ PGS (46874 47120) SGN-E337746+ PGS (46874 47120) SGN-E338892+ PGS (46874 47120) SGN-E338707+ PGS (46874 47120) SGN-E205056+ PGS (46874 47120) SGN-E204939+ PGS (46874 47120) SGN-E205100+ PGS (46874 47120) SGN-E278209+ PGS (46874 47120) SGN-E336810+ PGS (46874 47120) SGN-E336913+ PGS (46874 47120) SGN-E203940+ PGS (46874 47120) SGN-E200039+ PGS (46874 47120) SGN-E256174+ PGS (46874 47120) SGN-E207769+ PGS (46874 47120) SGN-E276456+ PGS (46874 47120) SGN-E208115+ PGS (46874 47120) SGN-E210426+ PGS (46874 47120) SGN-E208277+ PGS (46874 47120) SGN-E210135+ PGS (46874 47120) SGN-E201442+ PGS (46874 47120) SGN-E208827+ PGS (46874 47120) SGN-E200871+ PGS (46877 47128) SGN-E263617+ PGS (46877 47128) SGN-E256630+ PGS (46879 47128) SGN-E336261+ PGS (46879 47128) SGN-E350897+ PGS (46879 47128) SGN-E201143+ PGS (46879 47128) SGN-E213536+ PGS (46879 47128) SGN-E253452+ PGS (46879 47128) SGN-E204875+ PGS (46879 47128) SGN-E254383+ PGS (46879 47128) SGN-E203662+ PGS (46879 47128) SGN-E212205+ PGS (46879 47128) SGN-E213837+ PGS (46879 47128) SGN-E213897+ PGS (46879 47128) SGN-E334899+ PGS (46879 47128) SGN-E253792+ PGS (46879 47128) SGN-E206535+ PGS (46879 47128) SGN-E266663+ PGS (46879 47128) SGN-E258673+ PGS (46879 47128) SGN-E311822+ PGS (46879 47120) SGN-E207079+ PGS (46882 47128) SGN-E210944+ PGS (46882 47128) SGN-E205109+ PGS (46893 47128) SGN-E211610+ PGS (46893 47128) SGN-E204787+ PGS (46893 47128) SGN-E375347+ PGS (46904 47128) SGN-E352685+ PGS (46904 47128) SGN-E354546+ PGS (46905 47128) SGN-E212616+ PGS (46905 47128) SGN-E200099+ PGS (46910 47128) SGN-E275799+ PGS (46916 47131) SGN-E210719+ PGS (46916 47131) SGN-E210726+ PGS (46920 47128) SGN-E201711+ PGS (46923 47128) SGN-E268624+ PGS (46928 47128) SGN-E302617- 3-phase translation of AGS-1 (+strand): . . . . . . 46874 TCAACGTCTCGATCAAGGCCAGACTTGGACCATCAATGCACTGAGGGGCACTAAGATGGC S T S R S R P D L D H Q C T E G H - D G Q R L D Q G Q T W T I N A L R G T K M A N V S I K A R L G P S M H - G A L R W . . . . . . 46934 ACGTATATGGGGTCGTACTAAATGCAACTTTGACGGTGCTGGTAGAGGTTCTTGTGAGAC T Y M G S Y - M Q L - R C W - R F L - D R I W G R T K C N F D G A G R G S C E T H V Y G V V L N A T L T V L V E V L V R . . . . . . 46994 TGGTGATTGTGGTGGAGTCTTGCAGTGTACCGGGTGGGGTAAACCGCCAAACACCTTGGC W - L W W S L A V Y R V G - T A K H L G G D C G G V L Q C T G W G K P P N T L A L V I V V E S C S V P G G V N R Q T P W . . . . . . 47054 CGAATACGCCTTGAACCAGTTTAACAACCTAGATTTCTGGGACATTTCTTTAGTCGATGG R I R L E P V - Q P R F L G H F F S R W E Y A L N Q F N N L D F W D I S L V D G P N T P - T S L T T - I S G T F L - S M . . 47114 ATTTAATCTGCAAATTAG I - S A N - F N L Q I D L I C K L Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1+_PGL-15_AGS-1_PPS_1 (46875 47129) (frame '2'; 255 bp, 85 residues) 1 QRLDQGQTWT INALRGTKMA RIWGRTKCNF DGAGRGSCET GDCGGVLQCT GWGKPPNTLA 61 EYALNQFNNL DFWDISLVDG FNLQI 3-phase translation of AGS-1 (-strand): . . . . . . 47131 CTAATTTGCAGATTAAATCCATCGACTAAAGAAATGTCCCAGAAATCTAGGTTGTTAAAC L I C R L N P S T K E M S Q K S R L L N - F A D - I H R L K K C P R N L G C - T N L Q I K S I D - R N V P E I - V V K . . . . . . 47071 TGGTTCAAGGCGTATTCGGCCAAGGTGTTTGGCGGTTTACCCCACCCGGTACACTGCAAG W F K A Y S A K V F G G L P H P V H C K G S R R I R P R C L A V Y P T R Y T A R L V Q G V F G Q G V W R F T P P G T L Q . . . . . . 47011 ACTCCACCACAATCACCAGTCTCACAAGAACCTCTACCAGCACCGTCAAAGTTGCATTTA T P P Q S P V S Q E P L P A P S K L H L L H H N H Q S H K N L Y Q H R Q S C I - D S T T I T S L T R T S T S T V K V A F . . . . . . 46951 GTACGACCCCATATACGTGCCATCTTAGTGCCCCTCAGTGCATTGATGGTCCAAGTCTGG V R P H I R A I L V P L S A L M V Q V W Y D P I Y V P S - C P S V H - W S K S G S T T P Y T C H L S A P Q C I D G P S L . . 46891 CCTTGATCGAGACGTTGA P - S R R - L D R D V A L I E T L Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1-_PGL-15_AGS-1_PPS_1 (47131 46886) (frame '1'; 243 bp, 81 residues) 1 LICRLNPSTK EMSQKSRLLN WFKAYSAKVF GGLPHPVHCK TPPQSPVSQE PLPAPSKLHL 61 VRPHIRAILV PLSALMVQVW P- PGL 16 (- strand): 51577 50483 AGS-1 (51577 50672,50487 50483) SCR (e 0.985 d 0.000 a 0.688,e 0.800) Exon 1 51577 50672 ( 906 n); score: 0.985 Intron 1 50671 50488 ( 184 n); Pd: 0.000 Pa: 0.688 Exon 2 50487 50483 ( 5 n); score: 0.800 PGS (50868 50672,50487 50483) SGN-E238858- PGS (50743 50672,50487 50483) SGN-E239367- PGS (51577 50854) SGN-E341860+ PGS (51577 50864) SGN-E348822+ PGS (51577 50905) SGN-E341907+ PGS (51577 50910) SGN-E341709+ PGS (51577 51195) SGN-E200127+ PGS (51572 51213) SGN-E340163+ PGS (51572 51213) SGN-E344592+ 3-phase translation of AGS-1 (-strand): . . . . . . 51577 ATTTATTAGTAGTCACACAAAAAATAAAAATATGAAAACTTCAATTTTTATTCTCTTTTC I Y - - S H K K - K Y E N F N F Y S L F F I S S H T K N K N M K T S I F I L F S L L V V T Q K I K I - K L Q F L F S F . . . . . . 51517 CCTTTTTTTCACCTATGCCAATGCAGCCACAATTTTAGTTCGTAACAATTGTCCCTACAC P F F H L C Q C S H N F S S - Q L S L H L F F T Y A N A A T I L V R N N C P Y T P F F S P M P M Q P Q F - F V T I V P T . . . . . . 51457 CGTTTGGGCTGCCGGAGTCCCAGCCGGAGGCGGCAAACGCCTCGATCGTGGCCAAACGTG R L G C R S P S R R R Q T P R S W P N V V W A A G V P A G G G K R L D R G Q T W P F G L P E S Q P E A A N A S I V A K R . . . . . . 51397 GACGATAAACGCCCCTCCGGGGACTAAACAAGCTCGAGTTTGGGGCCGTACCGGATGCAA D D K R P S G D - T S S S L G P Y R M Q T I N A P P G T K Q A R V W G R T G C N G R - T P L R G L N K L E F G A V P D A . . . . . . 51337 TTTCGATGCATCCGGTAAGGGAAAATGCCAAACTGGAGATTGTAATGGTCTTCTTGTATG F R C I R - G K M P N W R L - W S S C M F D A S G K G K C Q T G D C N G L L V C I S M H P V R E N A K L E I V M V F L Y . . . . . . 51277 TAAATCTTTTGGTGTACCACCAAATACATTAGCTGAATATGCCCTAAACCAATTTGCAAA - I F W C T T K Y I S - I C P K P I C K K S F G V P P N T L A E Y A L N Q F A N V N L L V Y H Q I H - L N M P - T N L Q . . . . . . 51217 TAAAGATTTTTTCGATATTTCTCTTGTCGATGGATTTAATGTTCCTATGGAATTTAGTCC - R F F R Y F S C R W I - C S Y G I - S K D F F D I S L V D G F N V P M E F S P I K I F S I F L L S M D L M F L W N L V . . . . . . 51157 AACTTCCAATGGGTGCACCCGTGGCATAACGTGTAAAGCGGAAATTAATCAACAATGTCC N F Q W V H P W H N V - S G N - S T M S T S N G C T R G I T C K A E I N Q Q C P Q L P M G A P V A - R V K R K L I N N V . . . . . . 51097 TAATGAATTGAAAGCTCCCGGAGGATGTAACAACCCTTGTACTGTTTTTAAGACTGATCA - - I E S S R R M - Q P L Y C F - D - S N E L K A P G G C N N P C T V F K T D Q L M N - K L P E D V T T L V L F L R L I . . . . . . 51037 ATATTGTTGTAACTCTGGTAACTGTGGTCCGACTAAATTTTCGAGATTTTTTAAGGAGAG I L L - L W - L W S D - I F E I F - G E Y C C N S G N C G P T K F S R F F K E R N I V V T L V T V V R L N F R D F L R R . . . . . . 50977 GTGTCCTGATGCATATAGTTACCCTAAGGATGATCAAACTAGTACTTTCACTTGCCCTGC V S - C I - L P - G - S N - Y F H L P C C P D A Y S Y P K D D Q T S T F T C P A G V L M H I V T L R M I K L V L S L A L . . . . . . 50917 TGGTACTAATTATAGGGTTGTATTCTGTCCTTAAATATCTATCTGCCTATCTATATATCC W Y - L - G C I L S L N I Y L P I Y I S G T N Y R V V F C P - I S I C L S I Y P L V L I I G L Y S V L K Y L S A Y L Y I . . . . . . 50857 TTTTGTATTAATAATTTGAATAAGGCTATGTTATTCTCCTTGCTAGGAGGATTAATTACT F C I N N L N K A M L F S L L G G L I T F V L I I - I R L C Y S P C - E D - L L L L Y - - F E - G Y V I L L A R R I N Y . . . . . . 50797 AAGTCAAGGAAAAATATGATGTTTTTATTCATCATATATATAGTGATAATATGGAAGTAC K S R K N M M F L F I I Y I V I I W K Y S Q G K I - C F Y S S Y I - - - Y G S T - V K E K Y D V F I H H I Y S D N M E V . . . . . . 50737 TATGTAGTTCCTTAGTTTGTGATGAATAAAAGGAAAATAAAGAATATCTTTATGATGATT Y V V P - F V M N K R K I K N I F M M I M - F L S L - - I K G K - R I S L - - F L C S S L V C D E - K E N K E Y L Y D D . : . 50677 TGGTCA : ATAAT W S : I G Q : - L V : N N Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1-_PGL-16_AGS-1_PPS_1 (51576 50884) (frame '2'; 690 bp, 230 residues) 1 FISSHTKNKN MKTSIFILFS LFFTYANAAT ILVRNNCPYT VWAAGVPAGG GKRLDRGQTW 61 TINAPPGTKQ ARVWGRTGCN FDASGKGKCQ TGDCNGLLVC KSFGVPPNTL AEYALNQFAN 121 KDFFDISLVD GFNVPMEFSP TSNGCTRGIT CKAEINQQCP NELKAPGGCN NPCTVFKTDQ 181 YCCNSGNCGP TKFSRFFKER CPDAYSYPKD DQTSTFTCPA GTNYRVVFCP - PGL 17 (+ strand): 62107 62300 AGS-1 (62107 62300) SCR (e 0.995) Exon 1 62107 62300 ( 194 n); score: 0.995 PGS (62107 62300) SGN-E232530- 3-phase translation of AGS-1 (+strand): . . . . . . 62107 TATATATGACAAACATGTAAACTTGATTAGGGTAAGATTCTCGTTTCAATTCTATGTGGA Y I - Q T C K L D - G K I L V S I L C G I Y D K H V N L I R V R F S F Q F Y V D Y M T N M - T - L G - D S R F N S M W . . . . . . 62167 TGTACACTCCGAAAAACTGTTTTTCCCTGTCCTATTTCAGAAGTCTAGGATTGGTTTTGT C T L R K T V F P C P I S E V - D W F C V H S E K L F F P V L F Q K S R I G F V M Y T P K N C F S L S Y F R S L G L V L . . . . . . 62227 AAATATGCATTTTAACTCAATTTCACATCTGTTCAAAAAATGCGTTCCTAGTGTTTCTGC K Y A F - L N F T S V Q K M R S - C F C N M H F N S I S H L F K K C V P S V S A - I C I L T Q F H I C S K N A F L V F L . . 62287 CATGGATAAATAAG H G - I M D K - P W I N K Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (-strand): . . . . . . 62300 CTTATTTATCCATGGCAGAAACACTAGGAACGCATTTTTTGAACAGATGTGAAATTGAGT L I Y P W Q K H - E R I F - T D V K L S L F I H G R N T R N A F F E Q M - N - V Y L S M A E T L G T H F L N R C E I E . . . . . . 62240 TAAAATGCATATTTACAAAACCAATCCTAGACTTCTGAAATAGGACAGGGAAAAACAGTT - N A Y L Q N Q S - T S E I G Q G K T V K M H I Y K T N P R L L K - D R E K Q F L K C I F T K P I L D F - N R T G K N S . . . . . . 62180 TTTCGGAGTGTACATCCACATAGAATTGAAACGAGAATCTTACCCTAATCAAGTTTACAT F R S V H P H R I E T R I L P - S S L H F G V Y I H I E L K R E S Y P N Q V Y M F S E C T S T - N - N E N L T L I K F T . . 62120 GTTTGTCATATATA V C H I F V I Y C L S Y I Maximal non-overlapping open reading frames (>= 64 codons): none PGL 18 (+ strand): 64270 70262 AGS-1 (64270 64622,65058 65107,65218 65353,65653 65754,65870 66097,66387 66468,66624 66706,66802 66893,67044 67410) SCR (e 1.000 d 0.981 a 1.000,e 1.000 d 0.963 a 1.000,e 1.000 d 0.969 a 0.983,e 1.000 d 0.999 a 0.993,e 1.000 d 0.982 a 0.970,e 1.000 d 0.998 a 0.979,e 1.000 d 0.000 a 0.997,e 1.000 d 0.997 a 0.990,e 1.000) Exon 1 64270 64622 ( 353 n); score: 1.000 Intron 1 64623 65057 ( 435 n); Pd: 0.981 Pa: 1.000 Exon 2 65058 65107 ( 50 n); score: 1.000 Intron 2 65108 65217 ( 110 n); Pd: 0.963 Pa: 1.000 Exon 3 65218 65353 ( 136 n); score: 1.000 Intron 3 65354 65652 ( 299 n); Pd: 0.969 Pa: 0.983 Exon 4 65653 65754 ( 102 n); score: 1.000 Intron 4 65755 65869 ( 115 n); Pd: 0.999 Pa: 0.993 Exon 5 65870 66097 ( 228 n); score: 1.000 Intron 5 66098 66386 ( 289 n); Pd: 0.982 Pa: 0.970 Exon 6 66387 66468 ( 82 n); score: 1.000 Intron 6 66469 66623 ( 155 n); Pd: 0.998 Pa: 0.979 Exon 7 66624 66706 ( 83 n); score: 1.000 Intron 7 66707 66801 ( 95 n); Pd: 0.000 Pa: 0.997 Exon 8 66802 66893 ( 92 n); score: 1.000 Intron 8 66894 67043 ( 150 n); Pd: 0.997 Pa: 0.990 Exon 9 67044 67410 ( 367 n); score: 1.000 PGS (64270 64622,65058 65107,65218 65353,65653 65754,65870 66058) SGN-E262143+ PGS (64270 64622,65058 65107,65218 65320) SGN-E256568+ PGS (64288 64622,65058 65107,65218 65353,65653 65682) SGN-E245261+ PGS (64289 64622,65058 65107,65218 65261) SGN-E295447+ PGS (64290 64622,65058 65107,65218 65332) SGN-E247239+ PGS (64292 64622,65058 65107,65218 65353,65653 65725) SGN-E325442+ PGS (64292 64622,65058 65107,65218 65353,65653 65724) SGN-E331696+ PGS (64292 64622,65058 65107,65218 65353,65653 65723) SGN-E331702+ PGS (64292 64622,65058 65107,65218 65353,65653 65682) SGN-E323607+ PGS (64292 64622,65058 65107,65218 65249) SGN-E200949+ PGS (64293 64622,65058 65107,65218 65353,65653 65754,65870 65973) SGN-E328737+ PGS (64293 64622,65058 65107,65218 65353,65653 65754,65870 65930) SGN-E328893+ PGS (64293 64622,65058 65107,65218 65353,65653 65691) SGN-E329036+ PGS (64293 64622,65058 65096) SGN-E280972+ PGS (64297 64622,65058 65107,65218 65353,65653 65671) SGN-E304041+ PGS (64297 64622,65058 65107,65218 65247) SGN-E305655+ PGS (64299 64622,65058 65107,65218 65353,65653 65725) SGN-E204373+ PGS (64299 64622,65058 65107,65218 65353,65653 65724) SGN-E299595+ PGS (64303 64622,65058 65107,65218 65353,65653 65724) SGN-E256622+ PGS (64303 64622,65058 65107,65218 65353,65653 65695) SGN-E263162+ PGS (64303 64622,65058 65107,65218 65260) SGN-E258215+ PGS (64304 64622,65058 65107,65218 65353,65653 65696) SGN-E299689+ PGS (64304 64622,65058 65107,65218 65243) SGN-E224382+ PGS (64304 64622,65058 65107,65218 65242) SGN-E224882+ PGS (64595 64622,65058 65107,65218 65353,65653 65723) SGN-E293389+ PGS (65220 65353,65653 65754,65870 66097,66387 66441) SGN-E247844+ PGS (65256 65353,65653 65754,65870 66097,66387 66468,66624 66706,66802 66819) SGN-E297537+ PGS (65272 65353,65653 65754,65870 66097,66387 66468,66624 66706,66802 66893,67044 67095) SGN-E211078+ PGS (65694 65754,65870 66097,66387 66468,66624 66706,66802 66893,67044 67209) SGN-E369438+ PGS (65696 65754,65870 66097,66387 66468,66624 66652) SGN-E246876+ PGS (65900 66097,66387 66468,66624 66706,66802 66893,67044 67211) SGN-E305446+ PGS (66446 66468,66624 66706,66802 66893,67044 67292) SGN-E216547+ PGS (66461 66468,66624 66706,66802 66893,67044 67282) SGN-E215562- PGS (66615 66706,66802 66893,67044 67330) SGN-E246170+ PGS (66659 66706,66802 66893,67044 67282) SGN-E215894- PGS (66803 66893,67044 67410) SGN-E304181- 3-phase translation of AGS-1 (+strand): . . . . . . 64270 TTTTTTTCAAGAAGAGTCTTGATTTGCTCAAAACTTTTTCCCTTTTTCTTCACGTATCTT F F S R R V L I C S K L F P F F F T Y L F F Q E E S - F A Q N F F P F S S R I F F F K K S L D L L K T F S L F L H V S . . . . . . 64330 CTACAACTAAAAAGAAAGAACCCCTTTTTTTCTGATTTTCCATAAAAATTGGTTCTTGAA L Q L K R K N P F F S D F P - K L V L E Y N - K E R T P F F L I F H K N W F L K S T T K K K E P L F F - F S I K I G S - . . . . . . 64390 AGGATAAAGATTGAATCTTTGTTGTGTTTTATGAAATGGGTGTTCAGTGTCAAGAAAATA R I K I E S L L C F M K W V F S V K K I G - R L N L C C V L - N G C S V S R K Y K D K D - I F V V F Y E M G V Q C Q E N . . . . . . 64450 TTTTGGTGACTGGAGGAGCTGGTTTCATTGGAACACATACTGTGGTGCAGTTACTGAATG F W - L E E L V S L E H I L W C S Y - M F G D W R S W F H W N T Y C G A V T E - I L V T G G A G F I G T H T V V Q L L N . . . . . . 64510 AAGGGTTCAAAGTTACAATCATTGATAACTTTCATAATTCTGTGAAAGAAGCTGTTGATA K G S K L Q S L I T F I I L - K K L L I R V Q S Y N H - - L S - F C E R S C - - E G F K V T I I D N F H N S V K E A V D . . . . . . : 64570 GAGTCAGAGAATTAGTTGGTCCTCAACTTTCACAGAATCTTGAATTCCATTTG : GGTGATA E S E N - L V L N F H R I L N S I W : V I S Q R I S W S S T F T E S - I P F : G - Y R V R E L V G P Q L S Q N L E F H L : G D . . . . . : . 65065 TTAGAAACAGAGATGACTTGGAGAAGCTATTTTCTAAGAAAGA : GTTTGCTGCTGTGGTCC L E T E M T W R S Y F L R K : S L L L W S - K Q R - L G E A I F - E R : V C C C G P I R N R D D L E K L F S K K E : F A A V V . . . . . . 65235 ATTTTGCTGGGCTTAAGGCTGTTGGAGAGAGTGTTGTTCAGCCCTTCCTTTACTTTGAGA I L L G L R L L E R V L F S P S F T L R F C W A - G C W R E C C S A L P L L - E H F A G L K A V G E S V V Q P F L Y F E . . . . . . : 65295 ACAATCTGATTGGATCAATAACTTTGTATTCAGTCATGGCCAAGTATAATTGTAAGAAG : T T I - L D Q - L C I Q S W P S I I V R S : Q S D W I N N F V F S H G Q V - L - E : V N N L I G S I T L Y S V M A K Y N C K K : . . . . . . 65654 TGGTTTTTTCATCATCTGCAACAGTTTATGGTCAGCCTGAAAAGGTTCCCTGTGTGGAGG W F F H H L Q Q F M V S L K R F P V W R G F F I I C N S L W S A - K G S L C G G L V F S S S A T V Y G Q P E K V P C V E . . . . . : . 65714 ATTTTGAATTGAAGGCTATGAATCCTTATGGTCGAACAAAG : CTATTTCTTGAAGATATTG I L N - R L - I L M V E Q S : Y F L K I L F - I E G Y E S L W S N K : A I S - R Y C D F E L K A M N P Y G R T K : L F L E D I . . . . . . 65889 CACGGGATATCCAGAAGGCTGATCAAGAATGGAATATCATACTGTTGAGGTATTTCAACC H G I S R R L I K N G I S Y C - G I S T T G Y P E G - S R M E Y H T V E V F Q P A R D I Q K A D Q E W N I I L L R Y F N . . . . . . 65949 CGGTAGGAGCTCATGAAAGTGGCAAACTCGGGGAAGATCCAAAGGGCATTCCGAACAATC R - E L M K V A N S G K I Q R A F R T I G R S S - K W Q T R G R S K G H S E Q S P V G A H E S G K L G E D P K G I P N N . . . . . . 66009 TTATGCCTTACATTCAGCAAGTAGCTGTTGGTAGATTGCCGGAGTTGAATGTATATGGCA L C L T F S K - L L V D C R S - M Y M A Y A L H S A S S C W - I A G V E C I W Q L M P Y I Q Q V A V G R L P E L N V Y G . . . : . . . 66069 ACGACTACCCTACACCTGATGGTACCGCG : ATACGAGATTATATCCATGTTATGGATTTGG T T T L H L M V P R : Y E I I S M L W I W R L P Y T - W Y R : D T R L Y P C Y G F G N D Y P T P D G T A : I R D Y I H V M D L . . . . . . : 66418 CGGACGGTCATGTTGTTGCACTTCAGAGACTTCTAAGGCAGAATCACATAG : GTTGTGTTG R T V M L L H F R D F - G R I T - : V V L G R S C C C T S E T S K A E S H R : L C C A D G H V V A L Q R L L R Q N H I : G C V . . . . . . 66633 CCTACAATTTGGGTACTGGAAAAGGCAAATCTGTCCTAGAGATGGTTGGTGCCTTTGAAA P T I W V L E K A N L S - R W L V P L K L Q F G Y W K R Q I C P R D G W C L - K A Y N L G T G K G K S V L E M V G A F E . . : . . . . 66693 AGGCGTCTGGAAAG : AAAATCCCGCTTAAAATGTGTCCAAGAAGACCAGGAGATGCCACTG R R L E R : K S R L K C V Q E D Q E M P L G V W K : E N P A - N V S K K T R R C H C K A S G K : K I P L K M C P R R P G D A T . . . . . : . 66848 CTGTTTACGCATCTACTGAAAAAGCTGAGAAGGAGCTCGGTTGGAA : GGCAAAATATGGGA L F T H L L K K L R R S S V G : R Q N M G C L R I Y - K S - E G A R L E : G K I W D A V Y A S T E K A E K E L G W K : A K Y G . . . . . . 67058 TAAATGAGATGTGCAGGGACCAGTGGAAATGGGCAAGCCAAAATCCTTGGGGTTACCAAC - M R C A G T S G N G Q A K I L G V T N K - D V Q G P V E M G K P K S L G L P T I N E M C R D Q W K W A S Q N P W G Y Q . . . . . . 67118 CAAAGCCTTGATATGTTATAATAATAATAATAATAATACAAGTAGCACTTGGAGTACAAA Q S L D M L - - - - - - Y K - H L E Y K K A L I C Y N N N N N N T S S T W S T K P K P - Y V I I I I I I I Q V A L G V Q . . . . . . 67178 ACTGTAGTCAACATCCTAGTACTTTACATTTCATGCAAACATTAGATGTATCCAAGGACA T V V N I L V L Y I S C K H - M Y P R T L - S T S - Y F T F H A N I R C I Q G Q N C S Q H P S T L H F M Q T L D V S K D . . . . . . 67238 AAAGTGTTCATCCATAATAGTTGTTGATGGTTATGTACTACTAAACCCTGTTGTTGTCTC K V F I H N S C - W L C T T K P C C C L K C S S I I V V D G Y V L L N P V V V S K S V H P - - L L M V M Y Y - T L L L S . . . . . . 67298 CCTTAAAGGTTTTATGGGAACTTGAATGTTCATCCTATTATGATCCCTTCAACCAAATCT P - R F Y G N L N V H P I M I P S T K S L K G F M G T - M F I L L - S L Q P N L P L K V L W E L E C S S Y Y D P F N Q I . . . . . . 67358 CTTTACTGATTGTAATTCATTCAAAAAGAGTAAATGATCTAGTCTACTATGCT L Y - L - F I Q K E - M I - S T M F T D C N S F K K S K - S S L L C S L L I V I H S K R V N D L V Y Y A Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1+_PGL-18_AGS-1_PPS_1 (64404 64622,65058 65107,65218 65353,65653 65754,65870 66097,66387 66468,66624 66706,66802 66893,67044 67128) (frame '0'; 1074 bp, 358 residues) 1 IFVVFYEMGV QCQENILVTG GAGFIGTHTV VQLLNEGFKV TIIDNFHNSV KEAVDRVREL 61 VGPQLSQNLE FHLGDIRNRD DLEKLFSKKE FAAVVHFAGL KAVGESVVQP FLYFENNLIG 121 SITLYSVMAK YNCKKLVFSS SATVYGQPEK VPCVEDFELK AMNPYGRTKL FLEDIARDIQ 181 KADQEWNIIL LRYFNPVGAH ESGKLGEDPK GIPNNLMPYI QQVAVGRLPE LNVYGNDYPT 241 PDGTAIRDYI HVMDLADGHV VALQRLLRQN HIGCVAYNLG TGKGKSVLEM VGAFEKASGK 301 KIPLKMCPRR PGDATAVYAS TEKAEKELGW KAKYGINEMC RDQWKWASQN PWGYQPKP- AGS-2 (66123 66468,66624 66706,66802 66847) SCR (e 1.000 d 0.998 a 0.979,e 1.000 d 0.000 a 0.997,e 1.000) Exon 1 66123 66468 ( 346 n); score: 1.000 Intron 1 66469 66623 ( 155 n); Pd: 0.998 Pa: 0.979 Exon 2 66624 66706 ( 83 n); score: 1.000 Intron 2 66707 66801 ( 95 n); Pd: 0.000 Pa: 0.997 Exon 3 66802 66847 ( 46 n); score: 1.000 PGS (66123 66468,66624 66706,66802 66847) SGN-E245136+ 3-phase translation of AGS-2 (+strand): . . . . . . 66123 GTGACTGTAGCTTCTTTGTATGAGGAAAAAAAAGAAACTGAATGACTCAACATACCATCT V T V A S L Y E E K K E T E - L N I P S - L - L L C M R K K K K L N D S T Y H L D C S F F V - G K K R N - M T Q H T I . . . . . . 66183 GTGACTAGAGTACATACGAAAGAAACAGAAAATGAAGAGCGAGCAGAAGTTAACAGCCGG V T R V H T K E T E N E E R A E V N S R - L E Y I R K K Q K M K S E Q K L T A G C D - S T Y E R N R K - R A S R S - Q P . . . . . . 66243 AACAACTTATTGAACTACTAATAATGAAGAGAAAAGACAGAAATATAGTTGAATATCCAA N N L L N Y - - - R E K T E I - L N I Q T T Y - T T N N E E K R Q K Y S - I S K E Q L I E L L I M K R K D R N I V E Y P . . . . . . 66303 ATATACTCATGACATGAATCACCTTTAACATATTTTGCTTCTTGTACTTGACTGTTAAAT I Y S - H E S P L T Y F A S C T - L L N Y T H D M N H L - H I L L L V L D C - M N I L M T - I T F N I F C F L Y L T V K . . . . . . 66363 GATCTTTAATCTATTTCTCACTAGATACGAGATTATATCCATGTTATGGATTTGGCGGAC D L - S I S H - I R D Y I H V M D L A D I F N L F L T R Y E I I S M L W I W R T - S L I Y F S L D T R L Y P C Y G F G G . . . . . : . 66423 GGTCATGTTGTTGCACTTCAGAGACTTCTAAGGCAGAATCACATAG : GTTGTGTTGCCTAC G H V V A L Q R L L R Q N H I : G C V A Y V M L L H F R D F - G R I T - : V V L P T R S C C C T S E T S K A E S H R : L C C L . . . . . . 66638 AATTTGGGTACTGGAAAAGGCAAATCTGTCCTAGAGATGGTTGGTGCCTTTGAAAAGGCG N L G T G K G K S V L E M V G A F E K A I W V L E K A N L S - R W L V P L K R R Q F G Y W K R Q I C P R D G W C L - K G . : . . . . . 66698 TCTGGAAAG : AAAATCCCGCTTAAAATGTGTCCAAGAAGACCAGGAGATGCCACTG S G K : K I P L K M C P R R P G D A T L E R : K S R L K C V Q E D Q E M P L V W K : E N P A - N V S K K T R R C H Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1+_PGL-18_AGS-2_PPS_1 (66387 66468,66624 66706,66802 66846) (frame '1'; 210 bp, 70 residues) 1 IRDYIHVMDL ADGHVVALQR LLRQNHIGCV AYNLGTGKGK SVLEMVGAFE KASGKKIPLK 61 MCPRRPGDAT AGS-3 (67576 68201,68600 69139) SCR (e 1.000 d 0.983 a 0.000,e 0.967) Exon 1 67576 68201 ( 626 n); score: 1.000 Intron 1 68202 68599 ( 398 n); Pd: 0.983 Pa: 0.000 Exon 2 68600 69139 ( 540 n); score: 0.967 PGS (67576 68201,68600 68749) SGN-E543704+ PGS (67577 68196) SGN-E304411+ PGS (67911 68201,68600 69139) SGN-E543703- 3-phase translation of AGS-3 (+strand): . . . . . . 67576 CTAATTAGTTATCTCTATGCAAATTTGCTCAATTGGCTGCAAAAGTATCCCAGACTTTTT L I S Y L Y A N L L N W L Q K Y P R L F - L V I S M Q I C S I G C K S I P D F L N - L S L C K F A Q L A A K V S Q T F . . . . . . 67636 GGTCAAATTGTTCTTTTGAGAGTAATCATTTGCTAACAGTTGAGGAAAGGAGAGAACTAT G Q I V L L R V I I C - Q L R K G E N Y V K L F F - E - S F A N S - G K E R T M W S N C S F E S N H L L T V E E R R E L . . . . . . 67696 GAAAGAAGAAGGTAATGTGATGGTGACTGCTCAGACAATCATATCTGGTGCTTCTCCTTC E R R R - C D G D C S D N H I W C F S F K E E G N V M V T A Q T I I S G A S P S - K K K V M - W - L L R Q S Y L V L L L . . . . . . 67756 TCCTACATTAACTCCACAACCACCTTTGCCAACACCATCACCATATTCGTTCTCAGTGGC S Y I N S T T T F A N T I T I F V L S G P T L T P Q P P L P T P S P Y S F S V A L L H - L H N H L C Q H H H H I R S Q W . . . . . . 67816 ATCGACAAGGTTGAGATCAAGGCCTTCTATATATGCATATGATCTTGCCCTAAGATCACT I D K V E I K A F Y I C I - S C P K I T S T R L R S R P S I Y A Y D L A L R S L H R Q G - D Q G L L Y M H M I L P - D H . . . . . . 67876 GGCACTTCTGTTCTCTTTCATATCTGCTCTTTCACTAGCTGTACCATCACCAACAAGGAC G T S V L F H I C S F T S C T I T N K D A L L F S F I S A L S L A V P S P T R T W H F C S L S Y L L F H - L Y H H Q Q G . . . . . . 67936 AAAACGAGGAACGATTTCAAAATTCTGTGATTACCCACAATTAACGTAAGAATCAACACA K T R N D F K I L - L P T I N V R I N T K R G T I S K F C D Y P Q L T - E S T Q Q N E E R F Q N S V I T H N - R K N Q H . . . . . . 67996 GGATTTCAGGATTTAAACTAAGACAACATTCAGTTCTATGGTTTTGAGAGCTGTTTTTAC G F Q D L N - D N I Q F Y G F E S C F Y D F R I - T K T T F S S M V L R A V F T R I S G F K L R Q H S V L W F - E L F L . . . . . . 68056 ACTACTGCAGGTACTGCTTCAGTGTAAGCGTATTAGCTTTTATCTACTCAGCTTTTCAAC T T A G T A S V - A Y - L L S T Q L F N L L Q V L L Q C K R I S F Y L L S F S T H Y C R Y C F S V S V L A F I Y S A F Q . . . . . . 68116 TCTTCAAAAGAGTTTGTGACATCGCTTATAGAGGTGTCTTGATCTCCGATAAGACCTCTG S S K E F V T S L I E V S - S P I R P L L Q K S L - H R L - R C L D L R - D L - L F K R V C D I A Y R G V L I S D K T S . . . : . . . 68176 ACTATCTCAGTTTCATACTCGATCAG : TTGACAGGTTACCTCCTCGTGTCCTCTTCTTCAG T I S V S Y S I S : - Q V T S S C P L L Q L S Q F H T R S : V D R L P P R V L F F S D Y L S F I L D Q : L T G Y L L V S S S S . . . . . . 68634 TAACTATACCAGTCATTCAAGAGATGGATATCCAAGCCTCTCTCTGGAAGGCAGCTATTC - L Y Q S F K R W I S K P L S G R Q L F N Y T S H S R D G Y P S L S L E G S Y S V T I P V I Q E M D I Q A S L W K A A I . . . . . . 68694 TTGCTGTTTGCATGTCATTTGCTGCTTTCATGGTCCTTGCAGTGTCTGCACTTTTATCAG L L F A C H L L L S W S L Q C L H F Y Q C C L H V I C C F H G P C S V C T F I R L A V C M S F A A F M V L A V S A L L S . . . . . . 68754 GCTACAAGCTGTGCAAAAGGATCATATGGTGATGGACTGGGAATTGAACGTGCAGCCTTC A T S C A K G S Y G D G L G I E R A A F L Q A V Q K D H M V M D W E L N V Q P S G Y K L C K R I I W - W T G N - T C S L . . . . . . 68814 AACTCCAGGATTGACAAAGCAATCGTAGTGTAAAATGGGACATGATTTCTTCGATCTGCT N S R I D K A I V V - N G T - F L R S A T P G L T K Q S - C K M G H D F F D L L Q L Q D - Q S N R S V K W D M I S S I C . . . . . . 68874 TGAAGCATCACAAGAAGCAATTGGGTGGCAGATACCAAATATCCTCTACTACACTAATGG - S I T R S N W V A D T K Y P L L H - W E A S Q E A I G W Q I P N I L Y Y T N G L K H H K K Q L G G R Y Q I S S T T L M . . . . . . 68934 TCTGGTAGAAGTTGATAACAGTAAGAAGAGGGTTTCAGAAGTTTATAGCAAAGAATAGAA S G R S - - Q - E E G F R S L - Q R I E L V E V D N S K K R V S E V Y S K E - K V W - K L I T V R R G F Q K F I A K N R . . . . . . 68994 ATATTTTTGGAGGAAAATATCCATATACACTATGAATTGTTGTCCCACCGCCATGGTGAA I F L E E N I H I H Y E L L S H R H G E Y F W R K I S I Y T M N C C P T A M V N N I F G G K Y P Y T L - I V V P P P W - . . . . . . 69054 TGAACAGTATTAAGTAGTAACAAACTAGTTTGAACTTCCTTGCTTCGAAGTATAACAAAA - T V L S S N K L V - T S L L R S I T K E Q Y - V V T N - F E L P C F E V - Q K M N S I K - - Q T S L N F L A S K Y N K . . . 69114 ACTTACAGTTCTTTTTCTACAGATAA T Y S S F S T D L T V L F L Q I N L Q F F F Y R - Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1+_PGL-18_AGS-3_PPS_1 (68043 68201,68600 68785) (frame '0'; 342 bp, 114 residues) 1 ELFLHYCRYC FSVSVLAFIY SAFQLFKRVC DIAYRGVLIS DKTSDYLSFI LDQLTGYLLV 61 SSSSVTIPVI QEMDIQASLW KAAILAVCMS FAAFMVLAVS ALLSGYKLCK RIIW- >C08HBa0235H18.1+_PGL-18_AGS-3_PPS_2 (67679 67984) (frame '2'; 303 bp, 101 residues) 1 GKERTMKEEG NVMVTAQTII SGASPSPTLT PQPPLPTPSP YSFSVASTRL RSRPSIYAYD 61 LALRSLALLF SFISALSLAV PSPTRTKRGT ISKFCDYPQL T- AGS-4 (69142 70262) SCR (e 0.992) Exon 1 69142 70262 (1121 n); score: 0.992 PGS (69142 69984) SGN-E538742+ PGS (69142 69964) SGN-E537427+ PGS (69142 69889) SGN-E537466+ PGS (69189 69361) SGN-E547890+ PGS (69193 70023) SGN-E546587+ PGS (69208 69525) SGN-E540084- PGS (69208 69524) SGN-E285474- PGS (69208 69374) SGN-E540081+ PGS (69489 70262) SGN-E538744- PGS (69496 70262) SGN-E537429- PGS (69551 70262) SGN-E537436- PGS (69570 70262) SGN-E537469- PGS (69874 70261) SGN-E265111- 3-phase translation of AGS-4 (+strand): . . . . . . 69142 TTTTACTGCTTCACTTAGGCCAAGAAGATAATAACAGTGTAATGTATAAAATTATAAATA F Y C F T - A K K I I T V - C I K L - I F T A S L R P R R - - Q C N V - N Y K Y L L L H L G Q E D N N S V M Y K I I N . . . . . . 69202 CTATCAAACACTGGCAGCTCCATATAACCAAAATACTAAACCTTCCTTGATGAACAAAGA L S N T G S S I - P K Y - T F L D E Q R Y Q T L A A P Y N Q N T K P S L M N K E T I K H W Q L H I T K I L N L P - - T K . . . . . . 69262 AGTAATTTCAGTTTAAAACCTACAGTTATCTCATATTCAACATTAGGAACATCAATTCAC S N F S L K P T V I S Y S T L G T S I H V I S V - N L Q L S H I Q H - E H Q F T K - F Q F K T Y S Y L I F N I R N I N S . . . . . . 69322 ATAGTACTTACGATATCTATTTATTTATACCCAGCAAATCTTGAAAATCATTCGTCTCAG I V L T I S I Y L Y P A N L E N H S S Q - Y L R Y L F I Y T Q Q I L K I I R L R H S T Y D I Y L F I P S K S - K S F V S . . . . . . 69382 ATGGCTTACATATATTCGTTCACCATACCATCAGATATTCAGATCAAATGTAGACTGCTC M A Y I Y S F T I P S D I Q I K C R L L W L T Y I R S P Y H Q I F R S N V D C S D G L H I F V H H T I R Y S D Q M - T A . . . . . . 69442 GGCACATTCTAAAGTCGGCACATTCTTTAGAAGGCAAAATCTCATCTGAATTGGCATGTT G T F - S R H I L - K A K S H L N W H V A H S K V G T F F R R Q N L I - I G M F R H I L K S A H S L E G K I S S E L A C . . . . . . 69502 TAATGGCAAGCAACAACATTTCAGCTCTCACCACTAGTAAACAAATTTCAGTTGTCTTTA - W Q A T T F Q L S P L V N K F Q L S L N G K Q Q H F S S H H - - T N F S C L - L M A S N N I S A L T T S K Q I S V V F . . . . . . 69562 GTGATTTGTCTAGTTAAAACTTGACAGAAGCAAGTGCTATGCAGTTTAATCTTCTATAAT V I C L V K T - Q K Q V L C S L I F Y N - F V - L K L D R S K C Y A V - S S I M S D L S S - N L T E A S A M Q F N L L - . . . . . . 69622 GACAAGATTTCCCTCAGAAAATTCACATGCCTCGATAGAGAGGGAAAGTTGCTTCTGTAG D K I S L R K F T C L D R E G K L L L - T R F P S E N S H A S I E R E S C F C S - Q D F P Q K I H M P R - R G K V A S V . . . . . . 69682 CTTTTTTACCACAAAGACTTCTGACTCTTCACATATGGTTACTACCGTGCCCTTGCGACC L F Y H K D F - L F T Y G Y Y R A L A T F F T T K T S D S S H M V T T V P L R P A F L P Q R L L T L H I W L L P C P C D . . . . . . 69742 AAGCCTGCCCGTACGACCAGCTCGATGAGCATAATGAACCGAGTCAGTAGGTAACCCCAG K P A R T T S S M S I M N R V S R - P Q S L P V R P A R - A - - T E S V G N P R Q A C P Y D Q L D E H N E P S Q - V T P . . . . . . 69802 ATTAACTACAAGATCACATTCAGGTAAATCCAAGCCTCTAGCTGAAAGCTCATTCGTTAG I N Y K I T F R - I Q A S S - K L I R - L T T R S H S G K S K P L A E S S F V S D - L Q D H I Q V N P S L - L K A H S L . . . . . . 69862 CAGCACTCTAATCTCCCCATTTCTGAACTTCTTTAAGATTGTTGATCTCACAAGTTTGCT Q H S N L P I S E L L - D C - S H K F A S T L I S P F L N F F K I V D L T S L L A A L - S P H F - T S L R L L I S Q V C . . . . . . 69922 AAGATCACCATGTAATTCTGCAGCATTCATACCACGAGCTTCTAGTTTGAAGACAGCATC K I T M - F C S I H T T S F - F E D S I R S P C N S A A F I P R A S S L K T A S - D H H V I L Q H S Y H E L L V - R Q H . . . . . . 69982 TTTTAGCTGTTTTGTGTGGTTCATAAAAGCTATTACACATTTGGCATCCAGAGCGTGCAC F - L F C V V H K S Y Y T F G I Q S V H F S C F V W F I K A I T H L A S R A C T L L A V L C G S - K L L H I W H P E R A . . . . . . 70042 ACACCTTCTTAACATATCAACTTTGTGCTGTATCCTAGTAATAGTGTAATAATGCTGCAA T P S - H I N F V L Y P S N S V I M L Q H L L N I S T L C C I L V I V - - C C K H T F L T Y Q L C A V S - - - C N N A A . . . . . . 70102 ATTAGGGGGTAAGCTCTGAACATCAGGCATAGGTTGTACACTTGAGCTTGAATCAGTAGT I R G - A L N I R H R L Y T - A - I S S L G G K L - T S G I G C T L E L E S V V N - G V S S E H Q A - V V H L S L N Q - . . . . . . 70162 AGAAGGTGTTCCCGGTATATTAACAGATCCAGAAGGAGTGACAGACTCGAGTGGAACAAC R R C S R Y I N R S R R S D R L E W N N E G V P G I L T D P E G V T D S S G T T - K V F P V Y - Q I Q K E - Q T R V E Q . . . . . 70222 TTTATTGGCTTGGATGAGAAGTGGATCACAACCCCAACTTC F I G L D E K W I T T P T L L A W M R S G S Q P Q L L Y W L G - E V D H N P N F Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1+_PGL-18_AGS-4_PPS_1 (69779 70090) (frame '2'; 309 bp, 103 residues) 1 TESVGNPRLT TRSHSGKSKP LAESSFVSST LISPFLNFFK IVDLTSLLRS PCNSAAFIPR 61 ASSLKTASFS CFVWFIKAIT HLASRACTHL LNISTLCCIL VIV- >C08HBa0235H18.1+_PGL-18_AGS-4_PPS_2 (69241 69453) (frame '1'; 210 bp, 70 residues) 1 TFLDEQRSNF SLKPTVISYS TLGTSIHIVL TISIYLYPAN LENHSSQMAY IYSFTIPSDI 61 QIKCRLLGTF - 3-phase translation of AGS-4 (-strand): . . . . . . 70262 GAAGTTGGGGTTGTGATCCACTTCTCATCCAAGCCAATAAAGTTGTTCCACTCGAGTCTG E V G V V I H F S S K P I K L F H S S L K L G L - S T S H P S Q - S C S T R V C S W G C D P L L I Q A N K V V P L E S . . . . . . 70202 TCACTCCTTCTGGATCTGTTAATATACCGGGAACACCTTCTACTACTGATTCAAGCTCAA S L L L D L L I Y R E H L L L L I Q A Q H S F W I C - Y T G N T F Y Y - F K L K V T P S G S V N I P G T P S T T D S S S . . . . . . 70142 GTGTACAACCTATGCCTGATGTTCAGAGCTTACCCCCTAATTTGCAGCATTATTACACTA V Y N L C L M F R A Y P L I C S I I T L C T T Y A - C S E L T P - F A A L L H Y S V Q P M P D V Q S L P P N L Q H Y Y T . . . . . . 70082 TTACTAGGATACAGCACAAAGTTGATATGTTAAGAAGGTGTGTGCACGCTCTGGATGCCA L L G Y S T K L I C - E G V C T L W M P Y - D T A Q S - Y V K K V C A R S G C Q I T R I Q H K V D M L R R C V H A L D A . . . . . . 70022 AATGTGTAATAGCTTTTATGAACCACACAAAACAGCTAAAAGATGCTGTCTTCAAACTAG N V - - L L - T T Q N S - K M L S S N - M C N S F Y E P H K T A K R C C L Q T R K C V I A F M N H T K Q L K D A V F K L . . . . . . 69962 AAGCTCGTGGTATGAATGCTGCAGAATTACATGGTGATCTTAGCAAACTTGTGAGATCAA K L V V - M L Q N Y M V I L A N L - D Q S S W Y E C C R I T W - S - Q T C E I N E A R G M N A A E L H G D L S K L V R S . . . . . . 69902 CAATCTTAAAGAAGTTCAGAAATGGGGAGATTAGAGTGCTGCTAACGAATGAGCTTTCAG Q S - R S S E M G R L E C C - R M S F Q N L K E V Q K W G D - S A A N E - A F S T I L K K F R N G E I R V L L T N E L S . . . . . . 69842 CTAGAGGCTTGGATTTACCTGAATGTGATCTTGTAGTTAATCTGGGGTTACCTACTGACT L E A W I Y L N V I L - L I W G Y L L T - R L G F T - M - S C S - S G V T Y - L A R G L D L P E C D L V V N L G L P T D . . . . . . 69782 CGGTTCATTATGCTCATCGAGCTGGTCGTACGGGCAGGCTTGGTCGCAAGGGCACGGTAG R F I M L I E L V V R A G L V A R A R - G S L C S S S W S Y G Q A W S Q G H G S S V H Y A H R A G R T G R L G R K G T V . . . . . . 69722 TAACCATATGTGAAGAGTCAGAAGTCTTTGTGGTAAAAAAGCTACAGAAGCAACTTTCCC - P Y V K S Q K S L W - K S Y R S N F P N H M - R V R S L C G K K A T E A T F P V T I C E E S E V F V V K K L Q K Q L S . . . . . . 69662 TCTCTATCGAGGCATGTGAATTTTCTGAGGGAAATCTTGTCATTATAGAAGATTAAACTG S L S R H V N F L R E I L S L - K I K L L Y R G M - I F - G K S C H Y R R L N C L S I E A C E F S E G N L V I I E D - T . . . . . . 69602 CATAGCACTTGCTTCTGTCAAGTTTTAACTAGACAAATCACTAAAGACAACTGAAATTTG H S T C F C Q V L T R Q I T K D N - N L I A L A S V K F - L D K S L K T T E I C A - H L L L S S F N - T N H - R Q L K F . . . . . . 69542 TTTACTAGTGGTGAGAGCTGAAATGTTGTTGCTTGCCATTAAACATGCCAATTCAGATGA F T S G E S - N V V A C H - T C Q F R - L L V V R A E M L L L A I K H A N S D E V Y - W - E L K C C C L P L N M P I Q M . . . . . . 69482 GATTTTGCCTTCTAAAGAATGTGCCGACTTTAGAATGTGCCGAGCAGTCTACATTTGATC D F A F - R M C R L - N V P S S L H L I I L P S K E C A D F R M C R A V Y I - S R F C L L K N V P T L E C A E Q S T F D . . . . . . 69422 TGAATATCTGATGGTATGGTGAACGAATATATGTAAGCCATCTGAGACGAATGATTTTCA - I S D G M V N E Y M - A I - D E - F S E Y L M V W - T N I C K P S E T N D F Q L N I - W Y G E R I Y V S H L R R M I F . . . . . . 69362 AGATTTGCTGGGTATAAATAAATAGATATCGTAAGTACTATGTGAATTGATGTTCCTAAT R F A G Y K - I D I V S T M - I D V P N D L L G I N K - I S - V L C E L M F L M K I C W V - I N R Y R K Y Y V N - C S - . . . . . . 69302 GTTGAATATGAGATAACTGTAGGTTTTAAACTGAAATTACTTCTTTGTTCATCAAGGAAG V E Y E I T V G F K L K L L L C S S R K L N M R - L - V L N - N Y F F V H Q G R C - I - D N C R F - T E I T S L F I K E . . . . . . 69242 GTTTAGTATTTTGGTTATATGGAGCTGCCAGTGTTTGATAGTATTTATAATTTTATACAT V - Y F G Y M E L P V F D S I Y N F I H F S I L V I W S C Q C L I V F I I L Y I G L V F W L Y G A A S V - - Y L - F Y T . . . . . 69182 TACACTGTTATTATCTTCTTGGCCTAAGTGAAGCAGTAAAA Y T V I I F L A - V K Q - T L L L S S W P K - S S K L H C Y Y L L G L S E A V K Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1-_PGL-18_AGS-4_PPS_1 (70260 69607) (frame '0'; 651 bp, 217 residues) 1 SWGCDPLLIQ ANKVVPLESV TPSGSVNIPG TPSTTDSSSS VQPMPDVQSL PPNLQHYYTI 61 TRIQHKVDML RRCVHALDAK CVIAFMNHTK QLKDAVFKLE ARGMNAAELH GDLSKLVRST 121 ILKKFRNGEI RVLLTNELSA RGLDLPECDL VVNLGLPTDS VHYAHRAGRT GRLGRKGTVV 181 TICEESEVFV VKKLQKQLSL SIEACEFSEG NLVIIED- PGL 19 (- strand): 72228 70304 AGS-1 (72228 72191,71367 70304) SCR (e 0.947 d 0.991 a 0.980,e 1.000) Exon 1 72228 72191 ( 38 n); score: 0.947 Intron 1 72190 71368 ( 823 n); Pd: 0.991 Pa: 0.980 Exon 2 71367 70304 (1064 n); score: 1.000 PGS (70903 70304) SGN-E297685+ PGS (72228 72191,71367 70634) SGN-E546588+ 3-phase translation of AGS-1 (-strand): . . . . : . . 72228 GGAAGGGCAGCTAAGTTGTGAAGAAGAAGATGAAGGAG : TCTGATTGGTGATGATAGTAAA G R A A K L - R R R - R S : L I G D D S K E G Q L S C E E E D E G : V - L V M I V N K G S - V V K K K M K E : S D W - - - - . . . . . . 71345 TTGCTTAAGAGGATTTTGGCATTATAAATAGTCATATCAAGTTTGAGTTGTTCCATGAGA L L K R I L A L - I V I S S L S C S M R C L R G F W H Y K - S Y Q V - V V P - D I A - E D F G I I N S H I K F E L F H E . . . . . . 71285 TAGCAACTGGGAAAACAAGTACTAGAAAAACCATGCCTGCTTTAGTGCTAACAAGGGCCC - Q L G K Q V L E K P C L L - C - Q G P S N W E N K Y - K N H A C F S A N K G P I A T G K T S T R K T M P A L V L T R A . . . . . . 71225 TCTTGTTAATTGGGGATTCTTTAGCTTTCAGAAAAGCTACACAGTTTACACGGATAGCTC S C - L G I L - L S E K L H S L H G - L L V N W G F F S F Q K S Y T V Y T D S S L L L I G D S L A F R K A T Q F T R I A . . . . . . 71165 CATCTCAAGGCAATGTTCGCTTTTTAAGTAGCAGTGGATCCCTCACTCTAGCTAGCCTTG H L K A M F A F - V A V D P S L - L A L I S R Q C S L F K - Q W I P H S S - P W P S Q G N V R F L S S S G S L T L A S L . . . . . . 71105 GATTGAAGAGTGAAGTTAAGACAGTAAGTGCAAATGAGAAAAATAAGCTCCAGCAGGGAA D - R V K L R Q - V Q M R K I S S S R E I E E - S - D S K C K - E K - A P A G N G L K S E V K T V S A N E K N K L Q Q G . . . . . . 71045 TTTCAACTATTGAGGTCCCAAAGAGCAGAGAGAAGAAAAGAGTTAGTGGCAATAAACAAG F Q L L R S Q R A E R R K E L V A I N K F N Y - G P K E Q R E E K S - W Q - T R I S T I E V P K S R E K K R V S G N K Q . . . . . . 70985 GATTGGTTAAGGAGAAAAACCCAGTAGATATAATGACTGCACCATTTGCTGCGAAGTCAT D W L R R K T Q - I - - L H H L L R S H I G - G E K P S R Y N D C T I C C E V I G L V K E K N P V D I M T A P F A A K S . . . . . . 70925 TTTCAGAACTTGGCCTTCCACCTTTGTTGGTCGAAAGACTAGAGACGGAAGGCTTTACGA F Q N L A F H L C W S K D - R R K A L R F R T W P S T F V G R K T R D G R L Y D F S E L G L P P L L V E R L E T E G F T . . . . . . 70865 TTCCGACTGATGTTCAAGCTGCTGCAGTTCCAACTGTTCTTAAAAATCATGATGTTGTGA F R L M F K L L Q F Q L F L K I M M L - S D - C S S C C S S N C S - K S - C C D I P T D V Q A A A V P T V L K N H D V V . . . . . . 70805 TTCAGTCCTACACAGGTTCAGGAAAAACATTAGCTTATCTCCTTCCCATACTGTCTCGAG F S P T Q V Q E K H - L I S F P Y C L E S V L H R F R K N I S L S P S H T V S S I Q S Y T G S G K T L A Y L L P I L S R . . . . . . 70745 TTGGTCCGTTGAAGGAAGAACTTCCAGATGGCTATGAAACTGGGAACAAAATAGACATCG L V R - R K N F Q M A M K L G T K - T S W S V E G R T S R W L - N W E Q N R H R V G P L K E E L P D G Y E T G N K I D I . . . . . . 70685 AAGCAGTTATAGTAGCTCCTTCGAGGGAACTTGGCATGCAGATTGTCAGGGAAGTTGAAA K Q L - - L L R G N L A C R L S G K L K S S Y S S S F E G T W H A D C Q G S - K E A V I V A P S R E L G M Q I V R E V E . . . . . . 70625 AGCTGTTAGGACCAGCGAATAAGAAACTAGTCCAGCAGCTTGTAGGGGGTGCAAACCGAT S C - D Q R I R N - S S S L - G V Q T D A V R T S E - E T S P A A C R G C K P I K L L G P A N K K L V Q Q L V G G A N R . . . . . . 70565 CTAGACAGGAGGATGCTCTGAAGAAGAACAAGCCCGACATTGTAGTGGGGACACCAGGGC L D R R M L - R R T S P T L - W G H Q G - T G G C S E E E Q A R H C S G D T R A S R Q E D A L K K N K P D I V V G T P G . . . . . . 70505 GGATAGCAGAGATTAGTGCAGCTGGAAAGCTTCCTACCCATGGTTGTCGTTACTTGGTAT G - Q R L V Q L E S F L P M V V V T W Y D S R D - C S W K A S Y P W L S L L G I R I A E I S A A G K L P T H G C R Y L V . . . . . . 70445 TGGATGAAATTGATCAACTCCTTGCATTCACTTTCAGGGAGGACATGAAGCGTATATTAG W M K L I N S L H S L S G R T - S V Y - G - N - S T P C I H F Q G G H E A Y I R L D E I D Q L L A F T F R E D M K R I L . . . . . . 70385 ACCATGTGGGGAGAAGACCTGGTGCACGTGGAGGAGAGTCAAATAGTCCACTTGTCAAGC T M W G E D L V H V E E S Q I V H L S S P C G E K T W C T W R R V K - S T C Q A D H V G R R P G A R G G E S N S P L V K . . . 70325 GAGCTGCACGTCAGACTATTAT E L H V R L L S C T S D Y Y R A A R Q T I Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1-_PGL-19_AGS-1_PPS_1 (71337 70306) (frame '0'; 1032 bp, 344 residues) 1 EDFGIINSHI KFELFHEIAT GKTSTRKTMP ALVLTRALLL IGDSLAFRKA TQFTRIAPSQ 61 GNVRFLSSSG SLTLASLGLK SEVKTVSANE KNKLQQGIST IEVPKSREKK RVSGNKQGLV 121 KEKNPVDIMT APFAAKSFSE LGLPPLLVER LETEGFTIPT DVQAAAVPTV LKNHDVVIQS 181 YTGSGKTLAY LLPILSRVGP LKEELPDGYE TGNKIDIEAV IVAPSRELGM QIVREVEKLL 241 GPANKKLVQQ LVGGANRSRQ EDALKKNKPD IVVGTPGRIA EISAAGKLPT HGCRYLVLDE 301 IDQLLAFTFR EDMKRILDHV GRRPGARGGE SNSPLVKRAA RQTI PGL 20 (+ strand): 76159 76778 AGS-1 (76159 76778) SCR (e 0.995) Exon 1 76159 76778 ( 620 n); score: 0.995 PGS (76159 76778) SGN-E578000- 3-phase translation of AGS-1 (+strand): . . . . . . 76159 ACGGCGAATCCGGCGGATATACCGGCAGGTATACTAGGAGGACGAGCTTTGGAATTGCTT T A N P A D I P A G I L G G R A L E L L R R I R R I Y R Q V Y - E D E L W N C F G E S G G Y T G R Y T R R T S F G I A . . . . . . 76219 CGTACGGGGCAAGTTGACGGCGGCGGTGCGGCCATCACAGCGGCGGAGAGCAGCGGCTTC R T G Q V D G G G A A I T A A E S S G F V R G K L T A A V R P S Q R R R A A A S S Y G A S - R R R C G H H S G G E Q R L . . . . . . 76279 AAGGCGGATGAAGATATGAGCCCACGGTTGTTTGGTGTATCAATTGGGGTAAAGCGCGTG K A D E D M S P R L F G V S I G V K R V R R M K I - A H G C L V Y Q L G - S A - Q G G - R Y E P T V V W C I N W G K A R . . . . . . 76339 AGGAGAAGCAGCGAAGAAGAATCTGAGGATCAGGATCAAGTACAACCGCATGGATCAGAC R R S S E E E S E D Q D Q V Q P H G S D G E A A K K N L R I R I K Y N R M D Q T E E K Q R R R I - G S G S S T T A W I R . . . . . . 76399 ATGAAATCAGAGCCGTTAGATTCAGGAAGTGCTCAACATGATGATCAGCCATGGATTGAT M K S E P L D S G S A Q H D D Q P W I D - N Q S R - I Q E V L N M M I S H G L I H E I R A V R F R K C S T - - S A M D - . . . . . . 76459 CGATTAGATTTAGGGTGTTGATTTCCCTTGGAGGGTGGGGTCCACAGAAGCACTTCGGCA R L D L G C - F P L E G G V H R S T S A D - I - G V D F P W R V G S T E A L R H S I R F R V L I S L G G W G P Q K H F G . . . . . . 76519 TTGATGACCAACACGTGTACAATGGAAGATTGTTGGTTGTTTCTGGTGGTTTCTAGAAGA L M T N T C T M E D C W L F L V V S R R - - P T R V Q W K I V G C F W W F L E E I D D Q H V Y N G R L L V V S G G F - K . . . . . . 76579 AGTGAGAAATCAAGTCAAATGGTTTTTTGAGAAGGCCCCAAAAGAGGTGGAAAAGGAGAA S E K S S Q M V F - E G P K R G G K G E V R N Q V K W F F E K A P K E V E K E K K - E I K S N G F L R R P Q K R W K R R . . . . . . 76639 AAACGAAGTGGCTTTTTTAATATGTTTTCATAATTGGATTGGAAAAAATAGAGGGGGCTG K R S G F F N M F S - L D W K K - R G L N E V A F L I C F H N W I G K N R G G - K T K W L F - Y V F I I G L E K I E G A . . . . . . 76699 AGCTGGTTGGTTGAAAAAGATGACAAATGTTGGAAATGATAGTCAAATGTATTAATTAGT S W L V E K D D K C W K - - S N V L I S A G W L K K M T N V G N D S Q M Y - L V E L V G - K R - Q M L E M I V K C I N - . . 76759 TGGGATTAGGGAAATATTTA W D - G N I G I R E I F L G L G K Y L Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1+_PGL-20_AGS-1_PPS_1 (76159 76479) (frame '1'; 318 bp, 106 residues) 1 TANPADIPAG ILGGRALELL RTGQVDGGGA AITAAESSGF KADEDMSPRL FGVSIGVKRV 61 RRSSEEESED QDQVQPHGSD MKSEPLDSGS AQHDDQPWID RLDLGC- 3-phase translation of AGS-1 (-strand): . . . . . . 76778 TAAATATTTCCCTAATCCCAACTAATTAATACATTTGACTATCATTTCCAACATTTGTCA - I F P - S Q L I N T F D Y H F Q H L S K Y F P N P N - L I H L T I I S N I C H N I S L I P T N - Y I - L S F P T F V . . . . . . 76718 TCTTTTTCAACCAACCAGCTCAGCCCCCTCTATTTTTTCCAATCCAATTATGAAAACATA S F S T N Q L S P L Y F F Q S N Y E N I L F Q P T S S A P S I F S N P I M K T Y I F F N Q P A Q P P L F F P I Q L - K H . . . . . . 76658 TTAAAAAAGCCACTTCGTTTTTCTCCTTTTCCACCTCTTTTGGGGCCTTCTCAAAAAACC L K K P L R F S P F P P L L G P S Q K T - K S H F V F L L F H L F W G L L K K P I K K A T S F F S F S T S F G A F S K N . . . . . . 76598 ATTTGACTTGATTTCTCACTTCTTCTAGAAACCACCAGAAACAACCAACAATCTTCCATT I - L D F S L L L E T T R N N Q Q S S I F D L I S H F F - K P P E T T N N L P L H L T - F L T S S R N H Q K Q P T I F H . . . . . . 76538 GTACACGTGTTGGTCATCAATGCCGAAGTGCTTCTGTGGACCCCACCCTCCAAGGGAAAT V H V L V I N A E V L L W T P P S K G N Y T C W S S M P K C F C G P H P P R E I C T R V G H Q C R S A S V D P T L Q G K . . . . . . 76478 CAACACCCTAAATCTAATCGATCAATCCATGGCTGATCATCATGTTGAGCACTTCCTGAA Q H P K S N R S I H G - S S C - A L P E N T L N L I D Q S M A D H H V E H F L N S T P - I - S I N P W L I I M L S T S - . . . . . . 76418 TCTAACGGCTCTGATTTCATGTCTGATCCATGCGGTTGTACTTGATCCTGATCCTCAGAT S N G S D F M S D P C G C T - S - S S D L T A L I S C L I H A V V L D P D P Q I I - R L - F H V - S M R L Y L I L I L R . . . . . . 76358 TCTTCTTCGCTGCTTCTCCTCACGCGCTTTACCCCAATTGATACACCAAACAACCGTGGG S S S L L L L T R F T P I D T P N N R G L L R C F S S R A L P Q L I H Q T T V G F F F A A S P H A L Y P N - Y T K Q P W . . . . . . 76298 CTCATATCTTCATCCGCCTTGAAGCCGCTGCTCTCCGCCGCTGTGATGGCCGCACCGCCG L I S S S A L K P L L S A A V M A A P P S Y L H P P - S R C S P P L - W P H R R A H I F I R L E A A A L R R C D G R T A . . . . . . 76238 CCGTCAACTTGCCCCGTACGAAGCAATTCCAAAGCTCGTCCTCCTAGTATACCTGCCGGT P S T C P V R S N S K A R P P S I P A G R Q L A P Y E A I P K L V L L V Y L P V A V N L P R T K Q F Q S S S S - Y T C R . . 76178 ATATCCGCCGGATTCGCCGT I S A G F A Y P P D S P Y I R R I R R Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1-_PGL-20_AGS-1_PPS_1 (76570 76277) (frame '2'; 291 bp, 97 residues) 1 KPPETTNNLP LYTCWSSMPK CFCGPHPPRE INTLNLIDQS MADHHVEHFL NLTALISCLI 61 HAVVLDPDPQ ILLRCFSSRA LPQLIHQTTV GSYLHPP- PGL 21 (+ strand): 81718 88997 AGS-1 (81718 81773,81804 82126,82167 82202,83839 83882) SCR (e 0.750 d 0.000 a 0.765,e 0.899 d 0.896 a 0.000,e 0.653 d 0.000 a 0.000,e 0.705) Exon 1 81718 81773 ( 56 n); score: 0.750 Intron 1 81774 81803 ( 30 n); Pd: 0.000 Pa: 0.765 Exon 2 81804 82126 ( 323 n); score: 0.899 Intron 2 82127 82166 ( 40 n); Pd: 0.896 Pa: 0.000 Exon 3 82167 82202 ( 36 n); score: 0.653 Intron 3 82203 83838 (1636 n); Pd: 0.000 Pa: 0.000 Exon 4 83839 83882 ( 44 n); score: 0.705 PGS (81718 81773,81804 82044) SGN-E204223+ PGS (81718 81773,81804 82019) SGN-E374844+ PGS (81789 82124) SGN-E253695- PGS (81847 82124) SGN-E249253- PGS (81872 82126) SGN-E242674+ PGS (81872 82126) SGN-E233074+ PGS (81872 82126) SGN-E233594+ PGS (81872 82126) SGN-E233735+ PGS (81872 82126) SGN-E377238+ PGS (81872 82126) SGN-E237992+ PGS (81872 82126) SGN-E240879+ PGS (81995 82126) SGN-E376754+ PGS (82019 82082) SGN-E217478+ PGS (82019 82082) SGN-E229134+ PGS (82019 82082) SGN-E228654+ PGS (82020 82125) SGN-E577960- PGS (82067 82126,82167 82202,83839 83882) SGN-E256217+ 3-phase translation of AGS-1 (+strand): . . . . . . : 81718 AGTAAGGGCCGTTTGGATGGGCTTAATAAAAGTAGCTTTAAAAAAGTACTTTTAAA : TTAT S K G R L D G L N K S S F K K V L L N : Y V R A V W M G L I K V A L K K Y F - : I M - G P F G W A - - K - L - K S T F K : L . . . . . . 81808 GCGTTTGGATAAAAGTGCTGAAGTTGTTATGTCAAACGTGAAAAGAGAAAAATGGAAGAA A F G - K C - S C Y V K R E K R K M E E R L D K S A E V V M S N V K R E K W K K C V W I K V L K L L C Q T - K E K N G R . . . . . . 81868 AGAAATGTTAGGGTTATATGGATAATTTGGAGATTGTATAAAAATATTAAGAGCAAAAAG R N V R V I W I I W R L Y K N I K S K K E M L G L Y G - F G D C I K I L R A K R K K C - G Y M D N L E I V - K Y - E Q K . . . . . . 81928 ATAAAAATGTGGTCAACTTAAAACAGCTTATAAGCTAAAAAAAAAGCACCCCTACCCAGC I K M W S T - N S L - A K K K A P L P S - K C G Q L K T A Y K L K K K H P Y P A D K N V V N L K Q L I S - K K S T P T Q . . . . . . 81988 TTTTAACTTTTGGCTTAAAATAAGTTTTTTTTAACTTAAAATAAGTTATTTTGAGTATTG F - L L A - N K F F L T - N K L F - V L F N F W L K I S F F - L K I S Y F E Y C L L T F G L K - V F F N L K - V I L S I . . . . . . 82048 CCAAACAGCTAAACAAGTCAAAAATCAGCTTTTAAGTCAGTTTGACCAGCTTTTAAGCTG P N S - T S Q K S A F K S V - P A F K L Q T A K Q V K N Q L L S Q F D Q L L S - A K Q L N K S K I S F - V S L T S F - A . . : . . . . : 82108 AGCCAAACAGGCTCTAAGA : ATGTATATTTAATTTGCTATATCAAGTTGCATGCTA : TTTTT S Q T G S K : N V Y L I C Y I K L H A : I F A K Q A L R : M Y I - F A I S S C M L : F L E P N R L - E : C I F N L L Y Q V A C Y : F . . . . 83844 GAAGGGATTTTATTAAGAGTAAATTAACACATGATAATA E G I L L R V N - H M I I K G F Y - E - I N T - - - R D F I K S K L T H D N Maximal non-overlapping open reading frames (>= 64 codons): none AGS-2 (81718 81972) SCR (e 0.920) Exon 1 81718 81972 ( 255 n); score: 0.920 PGS (81718 81972) SGN-E578392+ PGS (81726 81799) SGN-E391901- 3-phase translation of AGS-2 (+strand): . . . . . . 81718 AGTAAGGGCCGTTTGGATGGGCTTAATAAAAGTAGCTTTAAAAAAGTACTTTTAAAAGTG S K G R L D G L N K S S F K K V L L K V V R A V W M G L I K V A L K K Y F - K C - G P F G W A - - K - L - K S T F K S . . . . . . 81778 CTGAAACTTATTTTTAAAATAAGCAGTTATGCGTTTGGATAAAAGTGCTGAAGTTGTTAT L K L I F K I S S Y A F G - K C - S C Y - N L F L K - A V M R L D K S A E V V M A E T Y F - N K Q L C V W I K V L K L L . . . . . . 81838 GTCAAACGTGAAAAGAGAAAAATGGAAGAAAGAAATGTTAGGGTTATATGGATAATTTGG V K R E K R K M E E R N V R V I W I I W S N V K R E K W K K E M L G L Y G - F G C Q T - K E K N G R K K C - G Y M D N L . . . . . . 81898 AGATTGTATAAAAATATTAAGAGCAAAAAGATAAAAATGTGGTCAACTTAAAACAGCTTA R L Y K N I K S K K I K M W S T - N S L D C I K I L R A K R - K C G Q L K T A Y E I V - K Y - E Q K D K N V V N L K Q L . . 81958 TAAGCTAAAAAAAAA - A K K K K L K K I S - K K Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-2 (-strand): . . . . . . 81972 TTTTTTTTTAGCTTATAAGCTGTTTTAAGTTGACCACATTTTTATCTTTTTGCTCTTAAT F F F S L - A V L S - P H F Y L F A L N F F L A Y K L F - V D H I F I F L L L I F F - L I S C F K L T T F L S F C S - . . . . . . 81912 ATTTTTATACAATCTCCAAATTATCCATATAACCCTAACATTTCTTTCTTCCATTTTTCT I F I Q S P N Y P Y N P N I S F F H F S F L Y N L Q I I H I T L T F L S S I F L Y F Y T I S K L S I - P - H F F L P F F . . . . . . 81852 CTTTTCACGTTTGACATAACAACTTCAGCACTTTTATCCAAACGCATAACTGCTTATTTT L F T F D I T T S A L L S K R I T A Y F F S R L T - Q L Q H F Y P N A - L L I L S F H V - H N N F S T F I Q T H N C L F . . . . . . 81792 AAAAATAAGTTTCAGCACTTTTAAAAGTACTTTTTTAAAGCTACTTTTATTAAGCCCATC K N K F Q H F - K Y F F K A T F I K P I K I S F S T F K S T F L K L L L L S P S - K - V S A L L K V L F - S Y F Y - A H . . 81732 CAAACGGCCCTTACT Q T A L T K R P L P N G P Y Maximal non-overlapping open reading frames (>= 64 codons): none AGS-3 (81785 81873,86113 86131,87803 87809,88204 88219,88967 88997) SCR (e 0.944 d 0.000 a 0.000,e 0.789 d 0.000 a 0.703,e 0.714 d 0.900 a 0.000,e 0.750 d 0.919 a 0.000,e 0.710) Exon 1 81785 81873 ( 89 n); score: 0.944 Intron 1 81874 86112 (4239 n); Pd: 0.000 Pa: 0.000 Exon 2 86113 86131 ( 19 n); score: 0.789 Intron 2 86132 87802 (1671 n); Pd: 0.000 Pa: 0.703 Exon 3 87803 87809 ( 7 n); score: 0.714 Intron 3 87810 88203 ( 394 n); Pd: 0.900 Pa: 0.000 Exon 4 88204 88219 ( 16 n); score: 0.750 Intron 4 88220 88966 ( 747 n); Pd: 0.919 Pa: 0.000 Exon 5 88967 88997 ( 31 n); score: 0.710 PGS (81785 81873,86113 86131,87803 87809,88204 88219,88967 88997) SGN-E546063+ 3-phase translation of AGS-3 (+strand): . . . . . . 81785 TTATTTTTAAAATAAGCAGTTATGCGTTTGGATAAAAGTGCTGAAGTTGTTATGTCAAAC L F L K - A V M R L D K S A E V V M S N Y F - N K Q L C V W I K V L K L L C Q T I F K I S S Y A F G - K C - S C Y V K . . . : . . : . : 81845 GTGAAAAGAGAAAAATGGAAGAAAGAAAT : TATTAAATAGGTCCCACAG : GAAAAAG : CTAGA V K R E K W K K E I : I K - V P Q : E K : A R - K E K N G R K K : L L N R S H R : K K : L E R E K R K M E E R N : Y - I G P T : G K S : - . . : . . . 88209 AAACAAAAAAG : GATAAGCAAAAAACTAAAGCAAAATCAAGAA K Q K R : I S K K L K Q N Q E N K K : G - A K N - S K I K K T K K : D K Q K T K A K S R Maximal non-overlapping open reading frames (>= 64 codons): none PGL 22 (- strand): 88030 85309 AGS-1 (88030 87948,86274 86179,86094 85914,85809 85309) SCR (e 1.000 d 1.000 a 0.997,e 1.000 d 0.951 a 0.978,e 1.000 d 0.902 a 0.972,e 1.000) Exon 1 88030 87948 ( 83 n); score: 1.000 Intron 1 87947 86275 (1673 n); Pd: 1.000 Pa: 0.997 Exon 2 86274 86179 ( 96 n); score: 1.000 Intron 2 86178 86095 ( 84 n); Pd: 0.951 Pa: 0.978 Exon 3 86094 85914 ( 181 n); score: 1.000 Intron 3 85913 85810 ( 104 n); Pd: 0.902 Pa: 0.972 Exon 4 85809 85309 ( 501 n); score: 1.000 PGS (85516 85309) SGN-E549052- PGS (88030 87948,86274 86179,86094 85914,85809 85348) SGN-E544497+ PGS (88029 87948,86274 86179,86094 85914,85809 85612) SGN-E307203+ 3-phase translation of AGS-1 (-strand): . . . . . . 88030 GGGTATTACTAGATGGAGGTCCATCACGTGCATTTTCTGAATTTGATGTTGTCATGATGG G Y Y - M E V H H V H F L N L M L S - W G I T R W R S I T C I F - I - C C H D G V L L D G G P S R A F S E F D V V M M . . . : . . . 87970 AAGATGACCTCAATATATTAAAA : GACTTGTTCGTTGCTGACGGAGAAGGGCTTCCCCGAT K M T S I Y - K : T C S L L T E K G F P D R - P Q Y I K : R L V R C - R R R A S P I E D D L N I L K : D L F V A D G E G L P R . . . . . . : 86237 CACTAGTTGAAGAAGAAGCGAGATTCGCTCATCAAATCCTCAGTTTATTTTCCCTCCGG : G H - L K K K R D S L I K S S V Y F P S G : T S - R R S E I R S S N P Q F I F P P : G S L V E E E A R F A H Q I L S L F S L R : . . . . . . 86093 CTGAATCTGTGATCCAATTGTTGATGACTTCTAGTGAACACAGTTCAGGACTTGAAGCAC L N L - S N C - - L L V N T V Q D L K H - I C D P I V D D F - - T Q F R T - S T A E S V I Q L L M T S S E H S S G L E A . . . . . . 86033 ATAAATATGGCCACAGACATCTGGGAGATGCACACACCTTGATACGCGTTTTATGTCACA I N M A T D I W E M H T P - Y A F Y V T - I W P Q T S G R C T H L D T R F M S Q H K Y G H R H L G D A H T L I R V L C H . . . . . . : 85973 AGAAGGAGAGAGAAGCTTCAAAATTCTTGAAGCGCTATTACCACCTCCCACCATCGTCAG : R R R E K L Q N S - S A I T T S H H R Q : E G E R S F K I L E A L L P P P T I V S : K K E R E A S K F L K R Y Y H L P P S S : . . . . . . 85809 TGTACAGTGGGGCTGCAGTGGAGGATTCCTCTATGAAGTCGCCACTTATGGCAGATCTCA C T V G L Q W R I P L - S R H L W Q I S V Q W G C S G G F L Y E V A T Y G R S H V Y S G A A V E D S S M K S P L M A D L . . . . . . 85749 TTAAAAGGAGTGCTTCGTTTCGTTGGTCTGACAAAAGCAGTAGCAGTTTCAGATCTTTAA L K G V L R F V G L T K A V A V S D L - - K E C F V S L V - Q K Q - Q F Q I F K I K R S A S F R W S D K S S S S F R S L . . . . . . 85689 AGAAGAAAATCCAAGACGCAACATCAGATTTTAGGCAAGTGGGATGGTGATGATGGACGC R R K S K T Q H Q I L G K W D G D D G R E E N P R R N I R F - A S G M V M M D A K K K I Q D A T S D F R Q V G W - - W T . . . . . . 85629 CTTCCTAACAGCATATCGCCCATTAAAGGTACTCGTTAAAAGTTGCATATATGCAAATTG L P N S I S P I K G T R - K L H I C K L F L T A Y R P L K V L V K S C I Y A N C P S - Q H I A H - R Y S L K V A Y M Q I . . . . . . 85569 CATTTAAATGAAGAATGAGAGGGTACTCCATTCTGGGAGTATTATTCTCAGAAAATTTTG H L N E E - E G T P F W E Y Y S Q K I L I - M K N E R V L H S G S I I L R K F C A F K - R M R G Y S I L G V L F S E N F . . . . . . 85509 TCATGTTTGCTTCTAACTTTGAAGATGTAGATCAATGTTGTAAACTCTGGGTCTCAACTA S C L L L T L K M - I N V V N S G S Q L H V C F - L - R C R S M L - T L G L N Y V M F A S N F E D V D Q C C K L W V S T . . . . . . 85449 TAAAAGTAAAAGTAACATTCCCAGATTATAGTATATCTACATCTCATACCTAGTTAGCAA - K - K - H S Q I I V Y L H L I P S - Q K S K S N I P R L - Y I Y I S Y L V S K I K V K V T F P D Y S I S T S H T - L A . . . . . . 85389 ATCAACATTGTGACATATCATGTATGCCTGTCCTTACTTTGCATCCACATTATTGAAATT I N I V T Y H V C L S L L C I H I I E I S T L - H I M Y A C P Y F A S T L L K F N Q H C D I S C M P V L T L H P H Y - N . . . 85329 TTATGTCATTATATATGAGAA L C H Y I - E Y V I I Y E F M S L Y M R Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1-_PGL-22_AGS-1_PPS_1 (88028 87948,86274 86179,86094 85914,85809 85640) (frame '0'; 525 bp, 175 residues) 1 VLLDGGPSRA FSEFDVVMME DDLNILKDLF VADGEGLPRS LVEEEARFAH QILSLFSLRA 61 ESVIQLLMTS SEHSSGLEAH KYGHRHLGDA HTLIRVLCHK KEREASKFLK RYYHLPPSSV 121 YSGAAVEDSS MKSPLMADLI KRSASFRWSD KSSSSFRSLK KKIQDATSDF RQVGW- PGL 23 (- strand): 96442 96077 AGS-1 (96442 96077) SCR (e 0.745) Exon 1 96442 96077 ( 366 n); score: 0.745 PGS (96442 96077) SGN-E212014+ 3-phase translation of AGS-1 (-strand): . . . . . . 96442 ATTAGTGTTGTCAAAGGCACACTTAAGCCCTAAAGCAGGGATCAAAATGTGTTGAGTGTT I S V V K G T L K P - S R D Q N V L S V L V L S K A H L S P K A G I K M C - V F - C C Q R H T - A L K Q G S K C V E C . . . . . . 96382 TCGCCTAACTAAATGTGCGCTTCGATGTCGTCATCAAGGTTCTAAGGCATACTTTTCCTT S P N - M C A S M S S S R F - G I L F L R L T K C A L R C R H Q G S K A Y F S F F A - L N V R F D V V I K V L R H T F P . . . . . . 96322 TCTAATGAACCTTTTATGGAACGGCAACATCCAACAATTGGTATTTCGCTTTATCATATT S N E P F M E R Q H P T I G I S L Y H I L M N L L W N G N I Q Q L V F R F I I F F - - T F Y G T A T S N N W Y F A L S Y . . . . . . 96262 TTTTTTTCTATTCTTTTTGTTCATATATTTGTCATTCTTGCTTATAATATTTAGTCTTGG F F S I L F V H I F V I L A Y N I - S W F F L F F L F I Y L S F L L I I F S L G F F F Y S F C S Y I C H S C L - Y L V L . . . . . . 96202 ACTAAACATATTTATTTGTATTTTTTCTCCCTTTGCGCCTTTTTAAAATAAAGCCCACAT T K H I Y L Y F F S L C A F L K - S P H L N I F I C I F S P F A P F - N K A H I D - T Y L F V F F L P L R L F K I K P T . . . . . . 96142 TTTATTAGCACTTTGCGCTTAAAGCTCCATCAAACCTTAGAGCTTTATTGCGCTTTTTGC F I S T L R L K L H Q T L E L Y C A F C L L A L C A - S S I K P - S F I A L F A F Y - H F A L K A P S N L R A L L R F L . 96082 TTTTGA F - F L L Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0235H18.1-_PGL-23_AGS-1_PPS_1 (96387 96157) (frame '2'; 228 bp, 76 residues) 1 VFRLTKCALR CRHQGSKAYF SFLMNLLWNG NIQQLVFRFI IFFFLFFLFI YLSFLLIIFS 61 LGLNIFICIF SPFAPF- 3-phase translation of AGS-1 (+strand): . . . . . . 96077 TCAAAAGCAAAAAGCGCAATAAAGCTCTAAGGTTTGATGGAGCTTTAAGCGCAAAGTGCT S K A K S A I K L - G L M E L - A Q S A Q K Q K A Q - S S K V - W S F K R K V L K S K K R N K A L R F D G A L S A K C . . . . . . 96137 AATAAAATGTGGGCTTTATTTTAAAAAGGCGCAAAGGGAGAAAAAATACAAATAAATATG N K M W A L F - K G A K G E K I Q I N M I K C G L Y F K K A Q R E K K Y K - I C - - N V G F I L K R R K G R K N T N K Y . . . . . . 96197 TTTAGTCCAAGACTAAATATTATAAGCAAGAATGACAAATATATGAACAAAAAGAATAGA F S P R L N I I S K N D K Y M N K K N R L V Q D - I L - A R M T N I - T K R I E V - S K T K Y Y K Q E - Q I Y E Q K E - . . . . . . 96257 AAAAAAAATATGATAAAGCGAAATACCAATTGTTGGATGTTGCCGTTCCATAAAAGGTTC K K N M I K R N T N C W M L P F H K R F K K I - - S E I P I V G C C R S I K G S K K K Y D K A K Y Q L L D V A V P - K V . . . . . . 96317 ATTAGAAAGGAAAAGTATGCCTTAGAACCTTGATGACGACATCGAAGCGCACATTTAGTT I R K E K Y A L E P - - R H R S A H L V L E R K S M P - N L D D D I E A H I - L H - K G K V C L R T L M T T S K R T F S . . . . . . 96377 AGGCGAAACACTCAACACATTTTGATCCCTGCTTTAGGGCTTAAGTGTGCCTTTGACAAC R R N T Q H I L I P A L G L K C A F D N G E T L N T F - S L L - G L S V P L T T - A K H S T H F D P C F R A - V C L - Q . 96437 ACTAAT T N L H - Maximal non-overlapping open reading frames (>= 64 codons): none PGL 24 (+ strand): 106092 106395 AGS-1 (106092 106395) SCR (e 0.747) Exon 1 106092 106395 ( 304 n); score: 0.747 PGS (106092 106395) SGN-E228234- PGS (106092 106395) SGN-E240450- PGS (106092 106395) SGN-E241852- 3-phase translation of AGS-1 (+strand): . . . . . . 106092 TAAGTGTCTGTTATGATCGATTTGGTTCGATTTTAAAGTTTATCAGTTTGGCTTATTGGT - V S V M I D L V R F - S L S V W L I G K C L L - S I W F D F K V Y Q F G L L V S V C Y D R F G S I L K F I S L A Y W . . . . . . 106152 TATCGATTTGTAGTGATGTTAAATCGTTATATAACCATTGAGATATTGACTTATTAATTA Y R F V V M L N R Y I T I E I L T Y - L I D L - - C - I V I - P L R Y - L I N Y L S I C S D V K S L Y N H - D I D L L I . . . . . . 106212 TTGGTTATTTATTTGTCGATTTTTTATCGTTATCGATTTAACCGCTAAGATTTAATCAAA L V I Y L S I F Y R Y R F N R - D L I K W L F I C R F F I V I D L T A K I - S K I G Y L F V D F L S L S I - P L R F N Q . . . . . . 106272 AATAAAATAAAAATCACTTAGATACAAGGTGACAAACCAAATGAACCATGCAAACGAGTT N K I K I T - I Q G D K P N E P C K R V I K - K S L R Y K V T N Q M N H A N E F K - N K N H L D T R - Q T K - T M Q T S . . . . . . 106332 CACAAGTTACATCTTGCTCAAAAGCAAACATTTTTACAGTGTAGAATTACCAAGTGCTTG H K L H L A Q K Q T F L Q C R I T K C L T S Y I L L K S K H F Y S V E L P S A - S Q V T S C S K A N I F T V - N Y Q V L . 106392 AGAC R D E Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (-strand): . . . . . . 106395 GTCTCAAGCACTTGGTAATTCTACACTGTAAAAATGTTTGCTTTTGAGCAAGATGTAACT V S S T W - F Y T V K M F A F E Q D V T S Q A L G N S T L - K C L L L S K M - L L K H L V I L H C K N V C F - A R C N . . . . . . 106335 TGTGAACTCGTTTGCATGGTTCATTTGGTTTGTCACCTTGTATCTAAGTGATTTTTATTT C E L V C M V H L V C H L V S K - F L F V N S F A W F I W F V T L Y L S D F Y F L - T R L H G S F G L S P C I - V I F I . . . . . . 106275 TATTTTTGATTAAATCTTAGCGGTTAAATCGATAACGATAAAAAATCGACAAATAAATAA Y F - L N L S G - I D N D K K S T N K - I F D - I L A V K S I T I K N R Q I N N L F L I K S - R L N R - R - K I D K - I . . . . . . 106215 CCAATAATTAATAAGTCAATATCTCAATGGTTATATAACGATTTAACATCACTACAAATC P I I N K S I S Q W L Y N D L T S L Q I Q - L I S Q Y L N G Y I T I - H H Y K S T N N - - V N I S M V I - R F N I T T N . . . . . . 106155 GATAACCAATAAGCCAAACTGATAAACTTTAAAATCGAACCAAATCGATCATAACAGACA D N Q - A K L I N F K I E P N R S - Q T I T N K P N - - T L K S N Q I D H N R H R - P I S Q T D K L - N R T K S I I T D . 106095 CTTA L L T Maximal non-overlapping open reading frames (>= 64 codons): none PGL 25 (+ strand): 107288 107435 AGS-1 (107288 107435) SCR (e 1.000) Exon 1 107288 107435 ( 148 n); score: 1.000 PGS (107288 107435) SGN-E313722+ 3-phase translation of AGS-1 (+strand): . . . . . . 107288 GTCTTCTTCGACATCATCTGGACCAGAAATCCCTTGGGTTGAGAAGTTTCGACCCACCAA V F F D I I W T R N P L G - E V S T H Q S S S T S S G P E I P W V E K F R P T K L L R H H L D Q K S L G L R S F D P P . . . . . . 107348 AGTATCCGACATCGTCGGCAATGAAGATGCAGTTGCCAGGCTTCAAGTTATTGCTCGTGA S I R H R R Q - R C S C Q A S S Y C S - V S D I V G N E D A V A R L Q V I A R D K Y P T S S A M K M Q L P G F K L L L V . . . 107408 TGGAAACATGCCCAATCTTATTTTAGCC W K H A Q S Y F S G N M P N L I L A M E T C P I L F - Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (-strand): . . . . . . 107435 GGCTAAAATAAGATTGGGCATGTTTCCATCACGAGCAATAACTTGAAGCCTGGCAACTGC G - N K I G H V S I T S N N L K P G N C A K I R L G M F P S R A I T - S L A T A L K - D W A C F H H E Q - L E A W Q L . . . . . . 107375 ATCTTCATTGCCGACGATGTCGGATACTTTGGTGGGTCGAAACTTCTCAACCCAAGGGAT I F I A D D V G Y F G G S K L L N P R D S S L P T M S D T L V G R N F S T Q G I H L H C R R C R I L W W V E T S Q P K G . . . 107315 TTCTGGTCCAGATGATGTCGAAGAAGAC F W S R - C R R R S G P D D V E E D F L V Q M M S K K Maximal non-overlapping open reading frames (>= 64 codons): none ... finished at: Mon Aug 28 23:04:47 2006