GeneSeqer. Version of March 12, 2006. Date run: Tue Jul 25 11:58:45 2006 (Bayesian) Splice site model (species): Arabidopsis thaliana Fast search parameters: MinMatchLen 16, MinQualityHSP 30, MinQualityCHAIN 50. Total number of ESTs: 34829 Total sequence length: 35392868 Minimum sequence length: 63 Maximum sequence length: 5381 Length distribution (number of sequences of specified length): < 100: 4 < 200: 53 < 300: 143 < 400: 353 < 500: 791 < 600: 1674 < 700: 2583 < 800: 4023 < 900: 6481 < 1000: 5706 >=1000: 13018 Input file : /tmp/bac-submission-temp-0nz25/C08HBa0294K15/C08HBa0294K15.seq.screen ________________________________________________________________________________ Sequence 1: C08HBa0294K15.1, from 1 to 72577, both strands analyzed. ... started at: Tue Jul 25 12:07:56 2006 EST library file: /tmp/cxgn-bacpublish-resources-lL3Nze/lycopersicum_combined_unigene_seqs; matching gDNA +strand ... ... found all matches, elapsed seconds = 3 ... matches indexed, elapsed seconds = 3 HitsTableSize = 61 EST library file: /tmp/cxgn-bacpublish-resources-lL3Nze/lycopersicum_combined_unigene_seqs; matching gDNA -strand ... ... found all matches, elapsed seconds = 3 ... matches indexed, elapsed seconds = 3 HitsTableSize = 41 ******************************************************************************** EST sequence 34 +strand 1660 n (File: SGN-U315285+) 1 TAGTCTTCGG TGGAGGTAGG TTATTGTTTC TCTTACGATA TTCGTAGTAA ACTCTTAATA 61 GAGAATGATA TGTATTGATA ATATTGTAAA CCCTGCTATG TGCTTAATTG TATGCTTGCA 121 TGAATGTAAC TATATAATTG TTATTATATA AGCATGATGA AGTTATTGAA TCCCAAATCT 181 TGTAAAAACC TAATCTCTTT TTAATGATGA TGCCTTGGTA AGGGAGAAGG CTTGATGAAC 241 TAAAGTAATG AGATTGATGA TGCCTTGGTA AGGGAGAAGG CTTGATGAAT TGATAGAATG 301 AGATTAGGGG ATCGGGTGTC ACGAACTGAC ACGTAGAATT AGGGGATCGG GTGTCACAAA 361 CCGACACGTA GATTAAGGGA TCAGGTGTCA CGAACCAACA CATAGATTAG GGGATCGGGT 421 GTCACGAACC GACACGTAGA TTTAGGGGAT CGGGTGTCAC GAACCGACAC GTAGATTTAG 481 GGGATCGGGT GTCACGAACC GACACGTAGA TTTAGGGGAT CAGGTGTCAC GAACCGACAC 541 GTAGATTTAG GGGATCGGAG TGTCACGTTC CGACATATAG ATTTAGGGGA TCGGAGTGTC 601 ACGTACCGAC ACAAGAGGAT TAATGAATAT TGAGGGAGCG GAGTGTCACG TACCGACACA 661 AGAGAAATAA AGATAATGAA TCTTGAAAGA TGTTAATATA CTCAATCTAA TGAACATGAT 721 TCCCAAATGA GTATGGTATT GAGGCTTGAG TCCTCATGTG TGAACTTGAC GGTAATTGTT 781 AATGATATAG TATTTGTTGT TGCTACATGT TGAGTATCAT AGTTGATTTT ATGATATTAC 841 TTGGTATATA TATTGATTTC TATTTTGAGT TGGCCGATGA TATCTACTCA GTACCCGTGT 901 TTTGTACTGA CCCCTACTTT TATGTTCTCT TCTTGTTTAT TTGTGGAGTG CAGCAAACGT 961 GCCATCGTCC TCAACTCAAC AGTAATTCAA GCCAGTCTTA CTACATCGGA AATTCAGGGT 1021 GAGCTAATGC TTCTAGCTTG GACTGGATCT TCTTCTTCAA GTCTCGATGC CTTGAACTTC 1081 CGGCATGGAC TAGCTTCTTA TGTATTTTTA GCTTTTAGAA TACTCATAGT TTAGTCATTT 1141 GATCGTAGAT GTTCTTGTGA TGATGACTTC CAGATTTTGG GGAATAATAG ATGTTGAATT 1201 TTAGAAGTTA ATGAATTGGT CTGTATTTAA TGAGTTTAAG TCTTCCACAT TACTTTCTGT 1261 TGATATTATA TTGAAATGTT AAGGTTAGAT TGGTTGGTTC GCTCACATAG GAGGGTAAGT 1321 GTGGGTGCCA GTCGCAACCC GGTTTTGGTC GTGACAAACT TGGTATCAGA GCATTAGGTT 1381 CGTTGGTCTC ATCACACAAG AACGAGTCTA GTAGAGTCTT AAGGAACGGT AGGGGGATGC 1441 CTTTACTTTT CCTTGAGAGG CTATAAGACT TTTGGAAAAT TCCATTCTTT CTTCTTTCGT 1501 GCTATTACTT GGGTCCAATT GGTATCTAGG TGATACAAAT TGGTATCTGA CCATCTTCAC 1561 TCTATTTCGC AGATGGTTAG AACTAGAGCA ACGACTACGC CAGCATCAAC ACCAGCACCG 1621 GCGGGACAGG GTGCGACTGA GCCAGCCACT GGGGCTGTGG Predicted gene structure (within gDNA segment 2705 to 15014): Exon 1 3364 3458 ( 95 n); cDNA 522 615 ( 94 n); score: 0.732 Intron 1 3459 3488 ( 30 n); Pd: 0.000 (s: 0.70), Pa: 0.000 (s: 0.29) ?? Exon 2 3489 4517 (1029 n); cDNA 616 1658 (1043 n); score: 0.786 MATCH C08HBa0294K15.1+ SGN-U315285+ 0.781 1124 0.677 C PGS_C08HBa0294K15.1+_SGN-U315285+ (3364 3458,3489 4517) Alignment (genomic DNA sequence = upper lines): AGGCTTGATG AACTGAAAGA ATGAGAATTA GGGGATCGGA GTGTCACGTT TCGACACCAG 3423 ||| | | | ||| || | | ||| ||| |||||||||| |||||||||| ||||| AGGTGTCACG AACCGACA-C GT-AGATTTA GGGGATCGGA GTGTCACGTT CCGACATATA 579 GATAGTATGG ATCGG-GTGT CACGTTCCGA CACCAGGATA GTATAGATCG GGTGTCACGT 3482 ||| || ||||| |||| ||||| |||| ||| || GATTTAGGGG ATCGGAGTGT CACGTACCGA CACAAG.... .......... .......... 615 TCCGAC---A -CCA-GGATA GT-ATGGATC GG-GTGTCAC GTTTTGACAC CAGGATAGTA 3535 | | | ||| | | ||| | || ||||||| || ||||| || | || ......AGGA TTAATGAATA TTGAGGGAGC GGAGTGTCAC GTACCGACAC AAGAGAAATA 669 AAGAGAATGA ATCTTGAATT ATGCTAATAT ACTCAGATTT AATGAACCTG TTTCCCAAAT 3595 |||| ||||| |||||||| ||| |||||| ||||| || | ||||||| || ||||||||| AAGATAATGA ATCTTGAAAG ATGTTAATAT ACTCA-ATCT AATGAACATG ATTCCCAAAT 728 GAGTATGGTG TGGAGGCTTG AGTCCTCATA GATGTGCTTG --GGTTGTGC CCAATGGTTA 3653 ||||||||| | |||||||| ||||||||| || |||| ||| | ||| | || GAGTATGGTA TTGAGGCTTG AGTCCTCATG TGTGAACTTG ACGGTAATTG TTAAT-GATA 787 TGGTACTTGT TGTTGTCACC TGTTTAGTAT TGTAGTTGAT TTTATGTTAT TA-TCTG-AT 3711 | ||| |||| ||||| || |||| ||||| |||||||| |||||| ||| || | | || TAGTATTTGT TGTTGCTACA TGTTGAGTAT CATAGTTGAT TTTATGATAT TACTTGGTAT 847 ATATATTGCT TTCTATTTTG AGTTGGCCGA TGATACCTAC TCAGTACTTG TGCCTTGTAC 3771 |||||||| | |||||||||| |||||||||| ||||| |||| ||||||| | || |||||| ATATATTGAT TTCTATTTTG AGTTGGCCGA TGATATCTAC TCAGTACCCG TGTTTTGTAC 907 TGACCCCTAC TTGTATGTTT CTTTCTTTGT TATTTGTGGA GTGCAGCAAA CGTGCCA-CA 3830 |||||||||| || |||||| ||||| | |||||||||| |||||||||| ||||||| | TGACCCCTAC TTTTATGTTC TCTTCTTGTT TATTTGTGGA GTGCAGCAAA CGTGCCATCG 967 ACTTCGACTC AACCGCAACT CTAGCCAGAC TTCAGCATAA TCAG-ATTTC A-GGTGAGCT 3888 | || |||| ||| | || | | |||||| | || | | | || | | ||| | |||||||| TCCTCAACTC AACAGTAATT CAAGCCAGTC TT-A-CTACA TCGGAAATTC AGGGTGAGCT 1025 ATTGTTCCTA GCTCGGACTG GATTCTTTCT TTCAGGTCTT GATGTCTTGA AGTTCGGACA 3948 | || | ||| ||| |||||| ||| | | |||| |||| |||| ||||| | ||| | || AATGCTTCTA GCTTGGACTG GATCTTCTTC TTCAAGTCTC GATGCCTTGA ACTTCCGGCA 1085 TGGACCATCT CTTTTATTTA -TTTTAGCTT CTTAG-ATAC TCTTAGATTT AGTAATTTGA 4006 ||||| | || | |||| || ||||||||| |||| |||| || ||| ||| ||| |||||| TGGACTAGCT -TCTTATGTA TTTTTAGCTT -TTAGAATAC TCATAG-TTT AGTCATTTGA 1142 GGATAGATGT TCTTGTGATG ATGACTTCCA GATTTTGGGG ATAATGATAA GTTTTGAGTT 4066 ||||||| |||||||||| |||||||||| |||||||||| ||| ||| | |||| || TCGTAGATGT TCTTGTGATG ATGACTTCCA GATTTTGGGG --AATAATAG ATGTTGAATT 1200 TTAGAAGTTA AT-TATTGAT -T-TCGTTAA TGAGTTTTAA GTTTTCCGTA TTATATTCTG 4123 |||||||||| || |||| | | | |||| |||| ||||| || |||| | ||| ||||| TTAGAAGTTA ATGAATTGGT CTGTATTTAA TGAG-TTTAA GTCTTCCACA TTACTTTCTG 1259 TT--TATTAT GGTTGAAATG TTGGGGTTTA GATTGGTTGG TTCGCTCACA TAGGAGGGTA 4181 || |||||| |||||||| || || ||| |||||||||| |||||||||| |||||||||| TTGATATTAT -ATTGAAATG TTAAGG-TTA GATTGGTTGG TTCGCTCACA TAGGAGGGTA 1317 AGTGTGGGTG CCACTCACGG CTCGTTTTGG GTCGTGACAA ACTTGGTATC AGAGCATTAG 4241 |||||||||| ||| || | | || ||| | |||||||||| |||||||||| |||||||||| AGTGTGGGTG CCAGTCGCAA CCCGGTTTTG GTCGTGACAA ACTTGGTATC AGAGCATTAG 1377 GTTCGTTGGT CTCATCACAC AAGAACAAGT CTAGTAGAGT CTTGAGGAAT GGTAGGGGGA 4301 |||||||||| |||||||||| |||||| ||| |||||||||| ||| ||||| |||||||||| GTTCGTTGGT CTCATCACAC AAGAACGAGT CTAGTAGAGT CTTAAGGAAC GGTAGGGGGA 1437 CGCCTTTACT TTTCTTTGAG AGGCTATAAG ACTTAAGGAA AATTCCATTC TTTCTTTCTT 4361 ||||||||| |||| ||||| |||||||||| |||| |||| |||||||||| |||| ||||| TGCCTTTACT TTTCCTTGAG AGGCTATAAG ACTTTTGGAA AATTCCATTC TTTC-TTCTT 1496 TCGTGCTATT ACTTGGATCC AATTGGTATC TAGGTGATAC AAATTGGTAT CTGACCATCT 4421 |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| TCGTGCTATT ACTTGGGTCC AATTGGTATC TAGGTGATAC AAATTGGTAT CTGACCATCT 1556 TCACTCTATT TCGCAGATGG TTAGAACTAG AGCAACAGCT --G-C-GC-- CGACACCAAC 4475 |||||||||| |||||||||| |||||||||| |||||| || | | || | |||||| | TCACTCTATT TCGCAGATGG TTAGAACTAG AGCAACGACT ACGCCAGCAT CAACACCAGC 1616 ACCGGCAAAA CAAGATGCGT CTGAACCAGC CACTGAGGCT GT 4517 |||||| | || | |||| |||| ||||| ||||| |||| || ACCGGCGGGA CAGGGTGCGA CTGAGCCAGC CACTGGGGCT GT 1658 hqPGS_C08HBa0294K15.1+_SGN-U315285+ (3364 3458,3489 4517) ******************************************************************************** EST sequence 58 +strand 1035 n (File: SGN-U339541+) 1 TAGAACCATC GAGATCCACC TCGGTGGCTT CCGCTCTAGA ACTCGTGGAT CCCCCGGGCT 61 GCAGGTCTTG ATGAGAATTT GTCTTATGAG GAGGAGCCTG TTGCCATTTT AGATAGAGAA 121 GTCCGCAAAT TGAGGTCAAG GGAGATTGCA TCTATCAAAG TTCAATGGAA GAATCGACCA 181 GTTGAAGAAT CCACTTGGGA GAAGGAAGTT GATATGCGAG AAAGATACCC ATACCTGTTT 241 ACAGATTCAG GTACTCCTTT TCGCCCTTGT TTTTCTTCTT GTGATCGTTC GGGGACGAAC 301 GATGGGTAAA TTGGTATCTA TTGTAACGAC CTGTTTAGTC GTTTTGAGTA ACAGATTTTA 361 TTTCTGGAAA AACTGACTGA GACGACGGAT CCCACGACGG ACCGTCGAGG GGGTCTCGTT 421 CCAAAACACT TAGAATTCTG AAATTTGGGT ACTGAAATCG ACTCTCTGAA CTTCGTGACG 481 GAATGGCAGG ACGGACCGTC ACAGGCGTGA TGGGCCGTCA CAGACCCTTG GTAAAAATCT 541 AGTCTCTGAA CTCTGTGACG GACGTGCAGG ACGGACCGTC ACAGACTGCG TAATCCCAGG 601 CTGGGTCGGA TTTCTGTTAA ATGTTTTAAG GGGCGTTTTG GACTATTCTT GCTTATAATT 661 ATAAAAGTTG TGGTTGAATA TAAATAATCC AATTTCTTGA GGGTTAAAGG AGATAACCTT 721 AAATTAATTA GTGGGTTATT TTGGCATCCT TTATACTTAA ATATATGGTA ATTAGGGTAA 781 AAAGAAAGAG GGGTTTGGAT TAAGAAAAAT TGTAAGCACC CAGGAGAAGG GAAAGAAAAA 841 CAATCCGAGA GAAAGAGGGG ATACCCAAGG AGGAAACAAA GCTTTGGGAA AATGGCTTGC 901 TTGAACACCA AATTCTTGGG GGAAGCAAAC GTGCCCGGTT TTTTCACCTA ACCCGCAACT 961 CTTAGCCAGT CTTTTATTTC ACCCCAATTT CAGGGTGGGC TAATGCTTTT TAGCCTGGGA 1021 CTGGATTTTC CTTTC Predicted gene structure (within gDNA segment 1 to 7613): Exon 1 2526 3162 ( 637 n); cDNA 322 925 ( 604 n); score: 0.723 Intron 1 3163 3817 ( 655 n); Pd: 0.991 (s: 0.60), Pa: 0.993 (s: 0) Exon 2 3818 3827 ( 10 n); cDNA 926 935 ( 10 n); score: 1.000 MATCH C08HBa0294K15.1+ SGN-U339541+ 0.723 647 0.625 C PGS_C08HBa0294K15.1+_SGN-U339541+ (2526 3162,3818 3827) Alignment (genomic DNA sequence = upper lines): TGTAACGACC TGT-TAGTCG TTTTGAGCAG TAGAGTTTAT TTCTGGTAAT AACTGTCTGG 2584 |||||||||| ||| |||||| ||||||| | ||| ||||| |||||| || ||||| | TGTAACGACC TGTTTAGTCG TTTTGAGTAA CAGATTTTAT TTCTGG-AAA AACTGAC--- 377 GTTGACGGAT CCCACGACGG ACCGTCATGG GCACGACGGA CCGTCGAGGG GGTCTCGTTC 2644 ||| | ||||||| | || ||||||||| |||||||||| |||||||||| --TGA--G-- ---ACGACGG A---TC---- CCACGACGGA CCGTCGAGGG GGTCTCGTTC 421 CAAAATACTT AG-TTTCTGA AAAATTGGGT ACTGAGAACA ACTCTCTGAA CTTCGCAACG 2703 ||||| |||| || ||||| ||| |||||| ||||| | | |||||||||| ||||| ||| CAAAACACTT AGAATTCTG- AAATTTGGGT ACTGAAATCG ACTCTCTGAA CTTCGTGACG 480 GAAGAGCAGG ACGGACCGTC GTAGGCACGA CGGACCGTCA CATGGTCTTA AATAAAAATT 2763 ||| ||||| |||||||||| |||| || || |||||| || | | | ||||||| GAATGGCAGG ACGGACCGTC ACAGGCGTGA TGGGCCGTCA CA-GACCCTT GGTAAAAATC 539 GAGTCTCTGA ACTCTGTAAC GACTTAGCAG GACGGACTAT CGCAGGCACG ACGGACCGTC 2823 ||||||||| ||||||| | | | | ||| | | ||| | | |||||||||| TAGTCTCTGA ACTCTGT--- G----A-C-G GAC-G----T -GCA-G---G ACGGACCGTC 580 ACAGACTGAG TAA-CCCTGA CTGGGTCGGA TTTCTGTTAA AATTTTTTAA GGGGTGTTTT 2882 |||||||| | ||| ||| | |||||||||| |||||||| | ||| |||||| |||| ||||| ACAGACTGCG TAATCCCAGG CTGGGTCGGA TTTCTGTT-A AATGTTTTAA GGGGCGTTTT 639 GGACTATTCC TGCTTATGAT TATAAGGTTA GTGGTTTAAT GTTAATAATT CAATTTCTTG 2942 ||||||||| ||||||| || ||||| | |||||| ||| | |||||| |||||||||| GGACTATTCT TGCTTATAAT TATAAAAGTT GTGGTTGAAT ATAAATAATC CAATTTCTTG 699 GGGGTTAAAG AAGACAACCT TGGAATAAGT AATGGGTTAC TTTTAGCATC TTTTATACTT 3002 ||||||||| ||| ||||| | | ||| | | ||||||| |||| ||||| ||||||||| AGGGTTAAAG GAGATAACCT TAAATTAATT AGTGGGTTA- TTTTGGCATC CTTTATACTT 758 AATTATATGA TAAATAGGGT -AAAACAAAG -GGATTTTGA AAGAGGAGAA AATTAAAAAA 3060 || |||||| ||| |||||| |||| |||| || |||| | | || || | | || | AAATATATGG TAATTAGGGT AAAAAGAAAG AGGGGTTTGG ATTAAGAAAA ATTGTAAGCA 818 AAAAAGA-AA AAGAAGGGAG AACGA-GTGA GAGGGAGAGA AGA-A-CGAA -GAGGAAAGC 3115 | || || ||| | | ||| | || ||| |||| || | | || ||||||| | CCCAGGAGAA GGGAAAGAAA AACAATCCGA GAGAAAGAGG GGATACCCAA GGAGGAAA-C 877 AAAGAACTTG AGGAGTAGCT TGCGTGATCA -CGAATTCTT CGCTGGAGGT AGGTTATGGT 3174 |||| | | | | ||| ||| ||| || | ||||||| | | || AAAGCTTTGG GAAAATGGCT TGCTTGAACA CCAAATTCTT GGGGGAAG.. .......... 925 TTATGCTATT TCATAGTAAA CTCTTAATAG CGAATGATAT GTGTTGGGTA GTATTGTAAA 3234 .......... .......... .......... .......... .......... .......... 925 GTCTTCTATA TGCTTAATTG TGTGCTTGCA TGACGTGATT ATATAATTGT GATAAAATAA 3294 .......... .......... .......... .......... .......... .......... 925 GCATGATGAG GCTATTGAAT CTTAAACCTT AAGACCTCTT TGTTAATGAT GATGCCTTGG 3354 .......... .......... .......... .......... .......... .......... 925 TATAAAAGAA GGCTTGATGA ACTGAAAGAA TGAGAATTAG GGGATCGGAG TGTCACGTTT 3414 .......... .......... .......... .......... .......... .......... 925 CGACACCAGG ATAGTATGGA TCGGGTGTCA CGTTCCGACA CCAGGATAGT ATAGATCGGG 3474 .......... .......... .......... .......... .......... .......... 925 TGTCACGTTC CGACACCAGG ATAGTATGGA TCGGGTGTCA CGTTTTGACA CCAGGATAGT 3534 .......... .......... .......... .......... .......... .......... 925 AAAGAGAATG AATCTTGAAT TATGCTAATA TACTCAGATT TAATGAACCT GTTTCCCAAA 3594 .......... .......... .......... .......... .......... .......... 925 TGAGTATGGT GTGGAGGCTT GAGTCCTCAT AGATGTGCTT GGGTTGTGCC CAATGGTTAT 3654 .......... .......... .......... .......... .......... .......... 925 GGTACTTGTT GTTGTCACCT GTTTAGTATT GTAGTTGATT TTATGTTATT ATCTGATATA 3714 .......... .......... .......... .......... .......... .......... 925 TATTGCTTTC TATTTTGAGT TGGCCGATGA TACCTACTCA GTACTTGTGC CTTGTACTGA 3774 .......... .......... .......... .......... .......... .......... 925 CCCCTACTTG TATGTTTCTT TCTTTGTTAT TTGTGGAGTG CAGCAAACGT GCC 3827 ||||||| ||| .......... .......... .......... .......... ...CAAACGT GCC 935 hqPGS_C08HBa0294K15.1+_SGN-U339541+ (2526 3162) ******************************************************************************** EST sequence 10 +strand 830 n (File: SGN-U343842+) 1 TTGGAACAAA AGCTCCTGCT CCACCGCGGT GGCGGCCGCT CTAGAACTAG TGGATCCCCC 61 GGGCTGCAGG AATTCGGCAC GAGCTGAGTC GACGGATCCC ACGACGGACC GTCATGAGCA 121 CGACGGACCG TGGAGGGTGT CTCGTTCCAA AACACTTAGA ATTCTGAAAT TTGGGTACTG 181 AGATCGACTC TCTGAACTTC GCGACGAAAT GGCACGACGG ACCGTCACAG GCATGACGGG 241 CTGTCACAAA CCCTTAGTGA AATTTAATCT CTGAACTTTG TGACGGAAGC AGCAGGACGG 301 ACCGTCGCAG GCACGACTGG TCGTCACAGA CTGCGTAACC CTGACTGGGT CGGATTTTTG 361 TTAAATGTTT TAAGGGGCGT TTTGGACTAT TCCTGCTTAT AATTATGAAA TTAGTGGTTT 421 AATGTTAATA ATTCAATTAC TTGGGGGGTT GAAGGAGATA ACCTTGAATT AATTAGCGGG 481 TTACTTTAGG TATCTTTCAT TCTTAATGAT ATGCTAATCA GGGTTAAAGA AAAAGGGTTT 541 GATTAAGACC AATACAACGA TCACAGGGAG GGAGGAACCA ACGATCCAAA AGACAGAACT 601 AAGACGAAAG CAGAACTTTA GAAAGTTAAC TTTTTGGATC ACAAATATCT TCCTTGGAGT 661 GGGTTATGGG TACTCCTTTT TCATGGGCAA CTCTTAATGG CCAATAAAAT GGTTTTGGAA 721 GGAATGGTAA ACCCTCCTTT ATCCTTAATT GGTGGTTCTG CCTAAGGGGA TTAATTATTG 781 GGGTTAAATA GGCCATAAGG GGCCTTATGA AACTAAATTT TTTAAACTTG Predicted gene structure (within gDNA segment 1 to 7467): Exon 1 2581 3329 ( 749 n); cDNA 84 827 ( 744 n); score: 0.740 MATCH C08HBa0294K15.1+ SGN-U343842+ 0.740 749 0.902 C PGS_C08HBa0294K15.1+_SGN-U343842+ (2581 3329) Alignment (genomic DNA sequence = upper lines): CTGGGTTGAC GGATCCCACG ACGGACCGTC ATGGGCACGA CGGACCGTCG AGGGGGTCTC 2640 ||| || ||| |||||||||| |||||||||| ||| |||||| |||||||| | |||| ||||| CTGAGTCGAC GGATCCCACG ACGGACCGTC ATGAGCACGA CGGACCGTGG AGGGTGTCTC 143 GTTCCAAAAT ACTTAG-TTT CTGAAAAATT GGGTACTGAG AACAACTCTC TGAACTTCGC 2699 ||||||||| |||||| || ||| ||| || |||||||||| | | |||||| |||||||||| GTTCCAAAAC ACTTAGAATT CTG-AAATTT GGGTACTGAG ATCGACTCTC TGAACTTCGC 202 AACGGAAGAG CAGGACGGAC CGTCGTAGGC ACGACGGACC GTCACATGGT CTTAAATAAA 2759 ||| || | || ||||||| |||| |||| | ||||| | |||||| ||| | | | GACGAAATGG CACGACGGAC CGTCACAGGC ATGACGGGCT GTCACAAACC CTT-AGT-GA 260 AATTGAGTCT CTGAACTCTG TAAC-GACTT AGCAGGACGG ACTATCGCAG GCACGACGGA 2818 |||| | ||| ||||||| || | || || |||||||||| || |||||| ||||||| | AATTTAATCT CTGAACTTTG TGACGGAAGC AGCAGGACGG ACCGTCGCAG GCACGACTGG 320 CCGTCACAGA CTGAGTAACC CTGACTGGGT CGGATTTCTG TTAAAATTTT TTAAGGGGTG 2878 ||||||||| ||| |||||| |||||||||| ||||||| || || |||| || |||||||| | TCGTCACAGA CTGCGTAACC CTGACTGGGT CGGATTTTTG TT-AAATGTT TTAAGGGGCG 379 TTTTGGACTA TTCCTGCTTA TGATTATAAG GTTAGTGGTT TAATGTTAAT AATTCAATTT 2938 |||||||||| |||||||||| | ||||| | ||||||||| |||||||||| ||||||||| TTTTGGACTA TTCCTGCTTA TAATTATGAA ATTAGTGGTT TAATGTTAAT AATTCAATTA 439 CTT-GGGGGT TAAAGAAGAC AACCTTGGAA TAAGTAATGG GTTACTTTTA GCATCTTTTA 2997 ||| |||||| | ||| ||| ||||||| | ||| || || |||||||| | |||||| | CTTGGGGGGT TGAAGGAGAT AACCTTGAAT TAATTAGCGG GTTACTTTAG GTATCTTTCA 499 TACTTAATTA TATGATAAAT AGGGTAAAAC AAAGGGATTT TGAAAGAGGA GAAAATTAAA 3057 | |||||| | |||| ||| ||||| ||| ||| | || || | | || ||| || TTCTTAATGA TATGCTAATC AGGGTTAAAG AAAAAGGGTT TG-ATTAAGA -CCAATACAA 557 AAAAAAAAGA AAAAGAAGGG AGAACGAGTG AGAGGGAGAG AAGAACGAAG AGGAAAGCAA 3117 | | || | || | ||||| | | ||| ||||| ||| | |||||| CGATCACAGG GAGGGAGGAA CCAACGA-T- CCA-AAAGA- CAGAACTAAG ACGAAAGC-- 611 AGAACTTGAG -GAG-TAGCT TGCGTGATCA CGAAT-TCTT CGCTGGAGGT AGGTTATGGT 3174 ||||||| || || || || | ||||| | ||| |||| | |||| || |||||||| AGAACTTTAG AAAGTTAACT TTTTGGATCA CAAATATCTT CCTTGGA-GT GGGTTATGGG 670 TTATGCTATT TCATAGTAAA CTCTTAATAG CGAATGATAT -GTGTTGGGT AGTATTGTAA 3233 | | || || |||| | || |||||||| | | ||| | || || |||| | || |||| TACTCCTTTT TCATGGGCAA CTCTTAATGG CCAATAAAAT GGTTTTGGAA GGAATGGTAA 730 AGTCTTCTAT ATGCTTAATT -GTGTGCTTG CATGACGTGA TTATATAATT GTGATAAAAT 3292 | || || | || ||||||| ||| || | | | | || ||| || ||| | | | |||| ACCCTCCTTT ATCCTTAATT GGTGGTTCTG CCTAAGGGGA TTA-ATTATT GGGGTTAAAT 789 AAG-CATGAT GAGGCTATTG AATCTTAAAC CTTAAGAC 3329 | | ||| | | | || || || || || || | || AGGCCATAAG GGGCCTTATG AAACTAAATT TTTTAAAC 827 hqPGS_C08HBa0294K15.1+_SGN-U343842+ (2581 3329) ******************************************************************************** EST sequence 20 +strand 954 n (File: SGN-U335077+) 1 NATCTTTTAG CTGGAGCTCC ACCGCGGTGG CGNGCCGCTC TAGAACTAGT GGATCCCCCG 61 GGCTGCAGGA ATTCGGCACG AGGGAATAAA GAAAATAGAA AGAACAAGAG AGAGAGGAAG 121 AATCGAACGA GAAGGGAGAA ACAAAGCTTG GAGAAAAATT TGCTTGCTTG ATCACTAATC 181 TTCGGTGGAG GTAGGTTATG GTTTTCATGC TTTCATAGTA AACTCTTAAT AGAGAATGAT 241 ATGTATTGGT AGTATTGTAA ACCCTGCTAT ATGCTTAATT GTATGCATGC ATGAACGTGA 301 TTATATAATT GTGATTATAT TAAGCATGAT GAAGTTATTG AATCCCAAAT CTTGATAAAA 361 ATCTAATCTC TTATTAATGA TGATGCCTTG GTATAGAAGA AGGCTTGATG AATAAAAGTA 421 ATGGGATTGA TGATGCCTTG GTATAGAGAA GGCCTGATGA TTTACAGAAT GATATTAGTG 481 GATCGGAGTG TCACGTACCG ACACATGCAG GGGATCGGGT GTCACGAACC GACACGTAGA 541 ATTAGGGGAT CGGGTGTCAC GAACTGGCAC GTAGAATTAG GGGATCGGGT GTCACGAACC 601 GGCACGTAGA TTAGGGGATC AGGTGTCACG AACCGACACG TAGAATTAGG GGATCGGGTG 661 TCACGAACCG ACACGTAGAA TTAGGGGATC GGNTGTCACG AACCGACACA TAGATATAGG 721 GGATNCGGAG TGTCACGTAC CGACACAAGA GGAAATATGA ATATGANGGA TCGGAGTGTC 781 ACGTACCGAC ACCAGAGATT TAAGGATATG AAATCTGAAA GAATGTATAT ACTCAATCTA 841 CGAACATAAT TCCAAATGAA TATGGGGTTG AAGCTTGAGC CCTCATGGAT GAACTGGATG 901 GGACCTAATG AGGATATAAT AACCTGTGGG GGCTCATGGT TAAGTTTTAA GGTA Predicted gene structure (within gDNA segment 708 to 9405): Exon 1 3034 3389 ( 356 n); cDNA 71 426 ( 356 n); score: 0.716 Intron 1 3390 3923 ( 534 n); Pd: 0.000 (s: 0.87), Pa: 0.043 (s: 0) Exon 2 3924 3939 ( 16 n); cDNA 427 442 ( 16 n); score: 0.625 Intron 2 3940 8432 (4493 n); Pd: 0.639 (s: 0), Pa: 0.000 (s: 0) Exon 3 8433 8438 ( 6 n); cDNA 443 448 ( 6 n); score: 1.000 MATCH C08HBa0294K15.1+ SGN-U335077+ 0.716 378 0.396 C PGS_C08HBa0294K15.1+_SGN-U335077+ (3034 3389,3924 3939,8433 8438) Alignment (genomic DNA sequence = upper lines): ATTTTGAAAG AGGAGAAAAT TAAAAAAAAA AAGAAAAAGA -AGGGAGAAC GAGTGAGAGG 3092 ||| | | | ||| ||| | |||| | | ||||| |||| || ||| | || | || ATTCGGCACG AGG-GAATAA AGAAAATAGA AAGAACAAGA GAGAGAGGAA GAAT-CGAAC 128 GAGAGAAGAA CGAAGAGGAA AGCAAAGAAC TTGAGGAGTA GCTTGCGTGA TCACGAATTC 3152 |||| | | | ||| | || ||| | | | | | |||||| ||| |||| || || GAGA-AGGGA -GAA-A-CAA AGC-TTGGAG A--AAAATTT GCTTGCTTGA TCACTAA-TC 180 TTCGCTGGAG GTAGGTTATG GTTTATGCTA TTTCATAGTA AACTCTTAAT AGCGAATGAT 3212 |||| ||||| |||||||||| |||| |||||||||| |||||||||| || ||||||| TTCGGTGGAG GTAGGTTATG GTTTTCATGC TTTCATAGTA AACTCTTAAT AGAGAATGAT 240 ATGTGTTGGG TAGTATTGTA AAGTCTTCTA TATGCTTAAT TGTGTGCTTG CATG-ACGTG 3271 |||| || || |||||||||| || || ||| |||||||||| ||| ||| || |||| ||||| ATGTATT-GG TAGTATTGTA AACCCTGCTA TATGCTTAAT TGTATGCATG CATGAACGTG 299 ATTATATAAT TGTGA-TAAA ATAAGCATGA TGAGGCTATT GAATCTTAAA -CCT--T-AA 3326 |||||||||| ||||| || | ||||||||| ||| | |||| ||||| ||| | | | || ATTATATAAT TGTGATTATA TTAAGCATGA TGAAGTTATT GAATCCCAAA TCTTGATAAA 359 GA-C--CTCT -TTGTTAATG ATGATGCCTT GGTATAAAAG AAGGCTTGAT GAACTGAAAG 3382 | | ||| || |||||| |||||||||| |||||| ||| |||||||||| ||| | |||| AATCTAATCT CTTATTAATG ATGATGCCTT GGTATAGAAG AAGGCTTGAT GAA-TAAAAG 418 -AATGAGAAT TAGGGGATCG GAGTGTCACG TTTCGACACC AGGATAGTAT GGATCGGGTG 3441 |||| || TAATGGGA.. .......... .......... .......... .......... .......... 426 TCACGTTCCG ACACCAGGAT AGTATAGATC GGGTGTCACG TTCCGACACC AGGATAGTAT 3501 .......... .......... .......... .......... .......... .......... 426 GGATCGGGTG TCACGTTTTG ACACCAGGAT AGTAAAGAGA ATGAATCTTG AATTATGCTA 3561 .......... .......... .......... .......... .......... .......... 426 ATATACTCAG ATTTAATGAA CCTGTTTCCC AAATGAGTAT GGTGTGGAGG CTTGAGTCCT 3621 .......... .......... .......... .......... .......... .......... 426 CATAGATGTG CTTGGGTTGT GCCCAATGGT TATGGTACTT GTTGTTGTCA CCTGTTTAGT 3681 .......... .......... .......... .......... .......... .......... 426 ATTGTAGTTG ATTTTATGTT ATTATCTGAT ATATATTGCT TTCTATTTTG AGTTGGCCGA 3741 .......... .......... .......... .......... .......... .......... 426 TGATACCTAC TCAGTACTTG TGCCTTGTAC TGACCCCTAC TTGTATGTTT CTTTCTTTGT 3801 .......... .......... .......... .......... .......... .......... 426 TATTTGTGGA GTGCAGCAAA CGTGCCACAA CTTCGACTCA ACCGCAACTC TAGCCAGACT 3861 .......... .......... .......... .......... .......... .......... 426 TCAGCATAAT CAGATTTCAG GTGAGCTATT GTTCCTAGCT CGGACTGGAT TCTTTCTTTC 3921 .......... .......... .......... .......... .......... .......... 426 AGGTCTTGAT GTCTTGAAGT TCGGACATGG ACCATCTCTT TTATTTATTT TAGCTTCTTA 3981 | |||| | |||| ..TTGATGAT GCCTTGGT.. .......... .......... .......... .......... 442 GATACTCTTA GATTTAGTAA TTTGAGGATA GATGTTCTTG TGATGATGAC TTCCAGATTT 4041 .......... .......... .......... .......... .......... .......... 442 TGGGGATAAT GATAAGTTTT GAGTTTTAGA AGTTAATTAT TGATTTCGTT AATGAGTTTT 4101 .......... .......... .......... .......... .......... .......... 442 AAGTTTTCCG TATTATATTC TGTTTATTAT GGTTGAAATG TTGGGGTTTA GATTGGTTGG 4161 .......... .......... .......... .......... .......... .......... 442 TTCGCTCACA TAGGAGGGTA AGTGTGGGTG CCACTCACGG CTCGTTTTGG GTCGTGACAA 4221 .......... .......... .......... .......... .......... .......... 442 ACTTGGTATC AGAGCATTAG GTTCGTTGGT CTCATCACAC AAGAACAAGT CTAGTAGAGT 4281 .......... .......... .......... .......... .......... .......... 442 CTTGAGGAAT GGTAGGGGGA CGCCTTTACT TTTCTTTGAG AGGCTATAAG ACTTAAGGAA 4341 .......... .......... .......... .......... .......... .......... 442 AATTCCATTC TTTCTTTCTT TCGTGCTATT ACTTGGATCC AATTGGTATC TAGGTGATAC 4401 .......... .......... .......... .......... .......... .......... 442 AAATTGGTAT CTGACCATCT TCACTCTATT TCGCAGATGG TTAGAACTAG AGCAACAGCT 4461 .......... .......... .......... .......... .......... .......... 442 GCGCCGACAC CAACACCGGC AAAACAAGAT GCGTCTGAAC CAGCCACTGA GGCTGTAGCT 4521 .......... .......... .......... .......... .......... .......... 442 CGAAGAGGAG CAGTGGCAAG AGGCCGCGGT AGAGGGTACT AGGGCGGTGA CTCCTCCACC 4581 .......... .......... .......... .......... .......... .......... 442 GACTGAGGAA GTATTAAGAG AGGGTGAGGA AGGGGGAAAT GAACAAGTGC AGAACGAGGA 4641 .......... .......... .......... .......... .......... .......... 442 ATTACCACCC CAACCTACCC TAGAGATGAT TAATCAGGTT CTTGCTTATC TTAGCGGGTT 4701 .......... .......... .......... .......... .......... .......... 442 ATCTGATCAA GGCCAGACAC CTCCAGTGTT TTCTGCACCA GTACCTCAGG TTCCGGGAGT 4761 .......... .......... .......... .......... .......... .......... 442 ACAACATACA GCTGCTGTGG CTCCCCGCAT GGATGCCTCA TTGGAAATAG GCACGTTTCC 4821 .......... .......... .......... .......... .......... .......... 442 TCGGTTGACT ACAGGGCCTA TAATGACAAG TGACCAGCAC GAACTTTTCA GTAAGTTCTT 4881 .......... .......... .......... .......... .......... .......... 442 GAAGTTGAAA CCTCCAGTTT TCAAGGGTGC TGAATCTGAG GATGCCTATG ACTTTCTGGT 4941 .......... .......... .......... .......... .......... .......... 442 TGATTGTCAT GAGTTGCTAC ATAAGATGCG CATAGTGGAA CGATTTGGCG TTGAGTTTGT 5001 .......... .......... .......... .......... .......... .......... 442 GACCTATCAG TTTTAGGGGA ACGCCAAAAT GTGGTGGCGG TCATATGTTG AGTGTCAACC 5061 .......... .......... .......... .......... .......... .......... 442 AGCACAGTCA CCACCTATGA CTTGGGCATC ATTCTCTAGC TTGTTTATGG AGAATTATAT 5121 .......... .......... .......... .......... .......... .......... 442 ACCTCGGACT TTGAGGGATA GGAGGAGAGA TAAGTTCCTG AGCTTAGAGC AAGGCAGGAT 5181 .......... .......... .......... .......... .......... .......... 442 GTCGGTTACT GCTTATGAGG CTAAGTTTTG TGCACTATCC AGGTATGCCA CCCAGCTTTG 5241 .......... .......... .......... .......... .......... .......... 442 CTTCAGTCCA CAAGAGCGGA TTCGTCGTTT CGTGAAAGGG TTGAGGTCAG ATTTGCGGAT 5301 .......... .......... .......... .......... .......... .......... 442 TTCAGCCTTA CAGGTAGCTG CTGCAGCAAA ATCCTTTCAG GAGGTGGTAG ATTTTGTAAT 5361 .......... .......... .......... .......... .......... .......... 442 AGAAGTGGAG GGAGTGAAGC CAGACGACTT CACCATGGCA TCAATATCTA AGAAGTTTCA 5421 .......... .......... .......... .......... .......... .......... 442 TAAAGGAGGT GATTTTAATG GTTTTTAATC CAGAGGGCAG AGTTCAGGAG GTTATCCAGC 5481 .......... .......... .......... .......... .......... .......... 442 CCGACCTATT CAGTCTTCAC TACAAGCTGT AGCTGGGGGT CCACCGCAGA CCGGTCAACA 5541 .......... .......... .......... .......... .......... .......... 442 TTTCTCTGAG TTTGGAGGTT ATCCCCAGAC TCTGTCGTTC TCATAGAGAC CTATGCTTTA 5601 .......... .......... .......... .......... .......... .......... 442 ATCAAGAGAG TGTTATGGAT GTGGAGAGAC TGGACATATT AAGAGGTATT GTCCAAAACA 5661 .......... .......... .......... .......... .......... .......... 442 GAGTTACAGA CCCCCAATAG TCAGAGGTAG AGGTGGTCAT GGGAGAGGTC GCTATTCTGG 5721 .......... .......... .......... .......... .......... .......... 442 AGGACGTGGT GGCCGAGGTA ATGGTGGTCA CCAAAACGGC CGGGGTGACA GGCAAACTGG 5781 .......... .......... .......... .......... .......... .......... 442 AACTTCTGTA GCTCAACATT GTAGGGGCAA CGGGCAGACC GGTGATAGGG CCCATTGTTA 5841 .......... .......... .......... .......... .......... .......... 442 TGCTTTCCCT GGGAGGTCTG AAGCGGAGAC ATCTGATGCC GTCATCACAG GTAATCTTTT 5901 .......... .......... .......... .......... .......... .......... 442 GGTTTGTGAT TGCATGGCTT CTGTATTGTT TGATCCTGGA TCCACATTTT CATATGTATC 5961 .......... .......... .......... .......... .......... .......... 442 TTCCTCATTT GCTACTGGTC TTAATTTACA TTATGAATTG CTTGACATAC CTATTCGTGT 6021 .......... .......... .......... .......... .......... .......... 442 TTCTACTCCG GTGGGTGAGT CTGTGATAGT TGAAAAAGTG TATAGGTCTT GTCTTGTGAC 6081 .......... .......... .......... .......... .......... .......... 442 TTTTGTGGGG AACAATACTC ATGTAGACTT GGTTATCTTA GAAATGGTTG ACTTCGATGT 6141 .......... .......... .......... .......... .......... .......... 442 AATTCTGGGT ATGACTTGGC TGTCTCCAAA TTTTGCAATC TTAGATTGTA ATGCTAAAAC 6201 .......... .......... .......... .......... .......... .......... 442 TGTAACGTCG GCCAAGCCTG GGACAGATCC GTTAGTGTGG GAGGGTGACT ACACTTCCAC 6261 .......... .......... .......... .......... .......... .......... 442 TCCATTTCGT ATTATCTCCT TTCTTCGTGC TAAGAGAATG GTTAGTAAGG GTTGTTTAGC 6321 .......... .......... .......... .......... .......... .......... 442 TTTCTTGACA CACCTCTAGG ATGATACTAC CCAAGTACCT TCAATTGAGT CGATTTCGAT 6381 .......... .......... .......... .......... .......... .......... 442 AGTCCGTGAG TTTCTAGATG TGTTTCCTGC AGACCTTCCT CGTATGCCAC CGAATAGAGA 6441 .......... .......... .......... .......... .......... .......... 442 TATTTATTTC TGTATTGATC TGGAGCCGGG TACTCGCCCC ATTTCCATAC CCCATTATAG 6501 .......... .......... .......... .......... .......... .......... 442 GATGGCTCCC GCTGAGTTAA GAGAGTTAAA GGCCCAACTT CAAGAGTTGT TAAGCAAAGG 6561 .......... .......... .......... .......... .......... .......... 442 CTTTATTAGA CCAAGTGCAT CCCCTTGGGG TGCTCCTATT TTATTTGTGA AGAAGAAGGA 6621 .......... .......... .......... .......... .......... .......... 442 TGGAAGTTTT CGGATGTGCA TAGACTATAG GCAACTGAAT AAGGTAATCA TTAAGAACAA 6681 .......... .......... .......... .......... .......... .......... 442 GTATCCTCTT CCTCGCATCG ATGATTTGTT CGATCAGTTA CAAGGTGCTT GTACCTTCTA 6741 .......... .......... .......... .......... .......... .......... 442 AAAAATTGAT TTGAGATCTG GTTATCATCA ATTAAAAATA CGGGCAACGG ATGTGCCCAA 6801 .......... .......... .......... .......... .......... .......... 442 GACTGCTTTT TGGACCACGT ATGGGCATTA TGAGTTCCTA GTAATGTCTT TTGGGCTTAC 6861 .......... .......... .......... .......... .......... .......... 442 GAATTCCCCT GCTGCTTTCA TGAGCTTAAT GAGCGGGATT TTTAAGCCAT ATCTGGATCT 6921 .......... .......... .......... .......... .......... .......... 442 CTTCGTCATT GTATTCATCG ATGACATACT GGTATACTCA AAGAGCAAGA AAGAACATGA 6981 .......... .......... .......... .......... .......... .......... 442 GGAGCACTTG AGAATGGTAT TGGAAATGTT GAGGGAGAAA GAGCTTTATG CCAAATTCTC 7041 .......... .......... .......... .......... .......... .......... 442 TAAGTGTGAG TTTTGGCTAG ATTCAGTGTC CTTCTTGGGG CGTGTGGTTT ATAAGGATGA 7101 .......... .......... .......... .......... .......... .......... 442 AGTGATGGTG GATCCTTCTA AGGTCGAAGC AGTGAAGAGT TGGGTAAGAC CTACTAATGT 7161 .......... .......... .......... .......... .......... .......... 442 TACAGAGGTA AGGAGCTTCG TTGGTTTAGC TAGCTACTAC CGTCGATTTG TCAAGGGATT 7221 .......... .......... .......... .......... .......... .......... 442 TTCTTCTGTT GCTTCTCAAT TGACAAACTT GACTAAGCAG AGTGTTCCAT TTGTATGGTC 7281 .......... .......... .......... .......... .......... .......... 442 GGACGAGTGT GAAGAAAGCT TTCAAAAGCT CAAGACCTTG TTGACTACTG CACCAATTCT 7341 .......... .......... .......... .......... .......... .......... 442 TACCCTGCTA GTGGAAGGTA AGAATTTCAT TGTTTATTGT GATGCATCCT ATTTTGGTTT 7401 .......... .......... .......... .......... .......... .......... 442 GGGTGCAGGG CTAATGCAAG AGAAGAATGT AATTGCTTAT GCTTCGAGGC AATTAAAGGT 7461 .......... .......... .......... .......... .......... .......... 442 GCATGAACGT AATTATCCAA CCCATGATTT GGAGTTGGCT GCGGTAGTGT TTGCATTAAA 7521 .......... .......... .......... .......... .......... .......... 442 GCAATGGAGA CATTATCTAT ATGGGGTTAA GTGTGAAGTC TATACGGATC ATCGTAGTTT 7581 .......... .......... .......... .......... .......... .......... 442 ACAGTATATC TTTACTCAGA AAGATTTGAA TTTGAGACAG AGGAGATGGA TGGAACTACT 7641 .......... .......... .......... .......... .......... .......... 442 GAAGGACTAT GATATCACTA TCTTGTATCA TCCGGAAAAA GCTAATGTTG TGGCAGATGT 7701 .......... .......... .......... .......... .......... .......... 442 TTTAAGTAGA AAGGCAGGGA ACATGGGAAG TCTAGCCCAC TTGCAGGTTT CTAGACGCCC 7761 .......... .......... .......... .......... .......... .......... 442 ATTGGCTAGA GAGGTTCAGA CTCTGGATAA TGACCTTATG AGGCTAGAAG TAAATGAGAA 7821 .......... .......... .......... .......... .......... .......... 442 GGGAGGATTT TTGGTCTGTG TGGAGGCAAG ATCTTCCTTT CTTGATAAGA TTAAAGGAAA 7881 .......... .......... .......... .......... .......... .......... 442 GCAGTTTACC GATGAGAAAC TGATCTGGAT CCGAGATAAG GTGTTGCGAG GAGAGGTTAA 7941 .......... .......... .......... .......... .......... .......... 442 AGAAGCAAAA ATCGATGAGG AAGGTGTTTT GAGGATTAAG GGAAGGGTAC GTGTACCCCG 8001 .......... .......... .......... .......... .......... .......... 442 CGTCGATGAC TTGATTCACA CTGTTCTTAC AGACGCTCAT AGTTCAAGGT ATTCTATACA 8061 .......... .......... .......... .......... .......... .......... 442 TCCTGGTGCA ACCAAGATGT ATCGTGATCT AAAGCAACAT TTTTGGTGAA GTAGGATGAA 8121 .......... .......... .......... .......... .......... .......... 442 GCGTGACATT GTTAATTTTG TTGCTCAATG CCCGAATTGT CTGCAGGTAA AGTATGAACA 8181 .......... .......... .......... .......... .......... .......... 442 CCAGAGGCCT GGAGGGACAC TTCAGAGAAT GCCCATTCCT GAATGGAAGT GGGAGAGAAT 8241 .......... .......... .......... .......... .......... .......... 442 TGCAATGGAC TTCGTGGTTA GTCTTCCAAA GACAACGGGT AAGTATGACT CCATTTGGGT 8301 .......... .......... .......... .......... .......... .......... 442 AATTGTTGAC AGATTAACTA AGTCTGCTCA TTTCATTCCG GTCAAGGTGA CTTATAATGC 8361 .......... .......... .......... .......... .......... .......... 442 AGAGAAGTTA GCCAAACTTT ACATCTCAGA AATTGTTCGA TTGCATGGAG TTCCACTTTC 8421 .......... .......... .......... .......... .......... .......... 442 CATTATATCA GATAGAG 8438 |||||| .......... .ATAGAG 448 hqPGS_C08HBa0294K15.1+_SGN-U335077+ (3034 3389) ******************************************************************************** EST sequence 31 +strand 647 n (File: SGN-U315283+) 1 ACGCCTTTTG CTTTATGAAA CTAAAAAATA AAAATTGAAG TTTTGAAACG ATAGAGGTTT 61 AAAATTTGAA AGTCTGCTTA GAGAGTTAAG GCTTAGAAAG TTTAACTAAG ACGGAATCTT 121 AAAAGATTAA TATCTCAAAT TTGCAAAGTT TGGCTAAGTA AATCGTGATA AAAGTTCAAA 181 TAAATTTGCA AAGGGTAAAA ATAAAAATAA TCAAATAAGT TAGTCGTTGG AAAACCGTAT 241 TTAACGGAGT GTCTTAGGTG CCTTAAACAC CTTCCTAAGA CGCTAATAAG AATCCCGAAT 301 CCTAAAAAAT ATTTTCAAAA CGACTTTTCT GTTTAAATTG TTTTGAGAAT GAGTTTTCTT 361 GATTTTTCTT AAAAATTAAG TGGCGACTCC TAAAGTCGAA AAATACTTTA AAATAAAACA 421 AACTCTTTTC GAAAAATCAC CTTTTTTCGA TAAAACAAAG CTTCTAGCTT GGACTGGATC 481 TTCTTCTTCA TGTCTTGATG CCTTGAAGTT CCGGCATGGA CTAGCTGTTT ATGTATTTTA 541 GCTTCTTAGA TACTCTTAGA TTTAGTAATT CGAAGTAGAT GTTCTTGTGA TGATAACTTC 601 CAGATTTTGG GAAATAATAG TTATTGAATT GGTTTTTATA AAAAAAA Predicted gene structure (within gDNA segment 1 to 5015): Exon 1 3022 3031 ( 10 n); cDNA 451 460 ( 10 n); score: 1.000 Intron 1 3032 3892 ( 861 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.80) Exon 2 3893 4063 ( 171 n); cDNA 461 627 ( 167 n); score: 0.842 Intron 2 4064 4152 ( 89 n); Pd: 0.000 (s: 0.86), Pa: 0.994 (s: 0) Exon 3 4153 4159 ( 7 n); cDNA 628 634 ( 7 n); score: 1.000 MATCH C08HBa0294K15.1+ SGN-U315283+ 0.842 188 0.291 C PGS_C08HBa0294K15.1+_SGN-U315283+ (3022 3031,3893 4063,4153 4159) Alignment (genomic DNA sequence = upper lines): TAAAACAAAG GGATTTTGAA AGAGGAGAAA ATTAAAAAAA AAAAGAAAAA GAAGGGAGAA 3081 |||||||||| TAAAACAAAG .......... .......... .......... .......... .......... 460 CGAGTGAGAG GGAGAGAAGA ACGAAGAGGA AAGCAAAGAA CTTGAGGAGT AGCTTGCGTG 3141 .......... .......... .......... .......... .......... .......... 460 ATCACGAATT CTTCGCTGGA GGTAGGTTAT GGTTTATGCT ATTTCATAGT AAACTCTTAA 3201 .......... .......... .......... .......... .......... .......... 460 TAGCGAATGA TATGTGTTGG GTAGTATTGT AAAGTCTTCT ATATGCTTAA TTGTGTGCTT 3261 .......... .......... .......... .......... .......... .......... 460 GCATGACGTG ATTATATAAT TGTGATAAAA TAAGCATGAT GAGGCTATTG AATCTTAAAC 3321 .......... .......... .......... .......... .......... .......... 460 CTTAAGACCT CTTTGTTAAT GATGATGCCT TGGTATAAAA GAAGGCTTGA TGAACTGAAA 3381 .......... .......... .......... .......... .......... .......... 460 GAATGAGAAT TAGGGGATCG GAGTGTCACG TTTCGACACC AGGATAGTAT GGATCGGGTG 3441 .......... .......... .......... .......... .......... .......... 460 TCACGTTCCG ACACCAGGAT AGTATAGATC GGGTGTCACG TTCCGACACC AGGATAGTAT 3501 .......... .......... .......... .......... .......... .......... 460 GGATCGGGTG TCACGTTTTG ACACCAGGAT AGTAAAGAGA ATGAATCTTG AATTATGCTA 3561 .......... .......... .......... .......... .......... .......... 460 ATATACTCAG ATTTAATGAA CCTGTTTCCC AAATGAGTAT GGTGTGGAGG CTTGAGTCCT 3621 .......... .......... .......... .......... .......... .......... 460 CATAGATGTG CTTGGGTTGT GCCCAATGGT TATGGTACTT GTTGTTGTCA CCTGTTTAGT 3681 .......... .......... .......... .......... .......... .......... 460 ATTGTAGTTG ATTTTATGTT ATTATCTGAT ATATATTGCT TTCTATTTTG AGTTGGCCGA 3741 .......... .......... .......... .......... .......... .......... 460 TGATACCTAC TCAGTACTTG TGCCTTGTAC TGACCCCTAC TTGTATGTTT CTTTCTTTGT 3801 .......... .......... .......... .......... .......... .......... 460 TATTTGTGGA GTGCAGCAAA CGTGCCACAA CTTCGACTCA ACCGCAACTC TAGCCAGACT 3861 .......... .......... .......... .......... .......... .......... 460 TCAGCATAAT CAGATTTCAG GTGAGCTATT GTTCCTAGCT CGGACTGGAT TCTTTCTTTC 3921 | |||||| ||||||||| | | ||| .......... .......... .......... .CTTCTAGCT TGGACTGGAT CTTCTTCTTC 489 AGGTCTTGAT GTCTTGAAGT TCGGACATGG ACCATCTCTT TTATTTATTT TAGCTTCTTA 3981 | |||||||| | |||||||| || | ||||| || | || | |||| ||||| |||||||||| ATGTCTTGAT GCCTTGAAGT TCCGGCATGG ACTAGCT-GT TTATGTATTT TAGCTTCTTA 548 GATACTCTTA GATTTAGTAA TTTGAGGATA GATGTTCTTG TGATGATGAC TTCCAGATTT 4041 |||||||||| |||||||||| || || | || |||||||||| ||||||| || |||||||||| GATACTCTTA GATTTAGTAA TTCGAAG-TA GATGTTCTTG TGATGATAAC TTCCAGATTT 607 TGGGGATAAT GATAAGTTTT GAGTTTTAGA AGTTAATTAT TGATTTCGTT AATGAGTTTT 4101 | |||| ||| ||| | || || T-GGGA-AAT AATAGTTATT GA........ .......... .......... .......... 627 AAGTTTTCCG TATTATATTC TGTTTATTAT GGTTGAAATG TTGGGGTTTA GATTGGTT 4159 ||||||| .......... .......... .......... .......... .......... .ATTGGTT 634 hqPGS_C08HBa0294K15.1+_SGN-U315283+ (3893 4063,4153 4159) ******************************************************************************** EST sequence 62 -strand 920 n (File: SGN-U335071-) 1 AAGGCTAGAT AATTATATAA TGAGAAGATG ATGCCTTGTG TAAAAGAAGC CTGATGGATT 61 GGGGATCGGG TGCCACGTTC CGGTACCAGG ATAGAATGAT TATGAGGATC GGAGTGTCAC 121 GTTCCGACCC CAGGATAGAT ATGGGATCGG GTGCCACGTT CCGGTACCAG GATAGAATAT 181 GAGGATCGGA GTGTCACGTT CCGACACCAG GATAGAAAAT GGATCGGGTG CCACGTTCCG 241 GTACCAGGAT AGAATGAGGA TCGGAGTGCC ACGTTCCGGC ACCAGGATAG AAATAGAGGA 301 TCGGAGTGTC ACGTACCGAC ACAAGAGGAA GAAAGATAAT GAATCTTGAA AGATAATGAA 361 TATACTCAAT CTAATGAACT TAATTCCCAA ATGAGTATGG TATTGAGGCT TGAGTCCTCA 421 TGTGTGAACT CGGTTGTAGT TATTGATGAA TTCATGGTGT TATTGCTACA TGTTGAGTAT 481 TGTAGTTGAT TTACATTATT ATTGATATAT ACTGTTCCCT ATTTTGAGTT GGCCGATGAT 541 ATCTACTCAG TACGTGTGGT TGTACTGACC CCTACTTTCA TGTTTTCCTC TTTGTTATTT 601 GTGTAATGCA GCAAACGTTC CGTCAACTTC AACTCAACAG TAGATCTAGC CAGTCTTCAC 661 TTCATCGGAA AATTCAGGGT GAGCTAATGC GTCTAGCTTG GACTGGGTCT TCTTCTTCAA 721 GTCTTGATGC CTTGAATTTC CGGCATGGAC TAGCTTTTTA GTTATTTTGT TCTTAGACAT 781 TCCTAGTTAA GTAATTTGAG ATAGATGTTC TTGTGATGAT GACTTCCAGA TTTTGGGGAT 841 AATAATAATA GTATTGAATT GTTTTTATTA AAAAAAAAAA AAAAAAAAAA AAAAACTCGA 901 GGGGGGGCCC GGTCCCAATG Predicted gene structure (within gDNA segment 1 to 5421): Exon 1 563 602 ( 40 n); cDNA 111 150 ( 40 n); score: 0.625 Intron 1 603 3362 (2760 n); Pd: 0.114 (s: 0.62), Pa: 0.508 (s: 0.64) Exon 2 3363 4056 ( 694 n); cDNA 151 848 ( 698 n); score: 0.749 PPA cDNA 870 896 MATCH C08HBa0294K15.1+ SGN-U335071- 0.749 734 0.798 C PGS_C08HBa0294K15.1+_SGN-U335071- (563 602,3363 4056) Alignment (genomic DNA sequence = upper lines): GGAGTATCAT TATACAATCA CAGTGTACAG ATAGGATCAC GCGACTATTC CAGTAAGCAC 622 ||||| ||| | | | | ||| || | || ||||| GGAGTGTCAC GTTCCGACCC CAGGATAGAT ATGGGATCGG .......... .......... 150 AACATATATC AAAATTACAA CAATCTAAAC ACATACATGC ATAGAATATA TACGCACACA 682 .......... .......... .......... .......... .......... .......... 150 ATGATTTATC ACTTACAAAC AAGTATAATT TCACAATTCT CAAGATATAA AGTCATGTCA 742 .......... .......... .......... .......... .......... .......... 150 AGTCGATGGT TCTCTCATAG AACCCAATTC AATGGTCCGC TCATGCAACC CATGCCCAAA 802 .......... .......... .......... .......... .......... .......... 150 CTAATAGCAT ACCAATACGT AGTACCCAAT TTAATGTTTA TGCTAGAATA TAGCAATCGA 862 .......... .......... .......... .......... .......... .......... 150 TCTAATATTT ATGCCGAAAT GTGGCAACCG ATTTCATATT TATGTCGAAA TGTGACAACC 922 .......... .......... .......... .......... .......... .......... 150 GATCAGAAAT CAACACCCGA TCCATTCAAC AAACCACAAT CACAATGTAT ACAATCATAA 982 .......... .......... .......... .......... .......... .......... 150 AATAAGAGGT TATTCATGGA AAGTAGTTCT TAGTTCATAT TTAGTTACAT TAGGTGTGAT 1042 .......... .......... .......... .......... .......... .......... 150 TAATAGACTT CATTCACATG CATGCATTAC AATGAAGCAA TCACTAACAT ACATCATTCA 1102 .......... .......... .......... .......... .......... .......... 150 AAACATGATA TCACAGTCAT CACCTACCTC GAATCCAAGC TTGAATCCCT TAAGGCATTT 1162 .......... .......... .......... .......... .......... .......... 150 GAATCTTCCC TTTTTGAATT CTTTTCGCTT GTTCTAGGTC TACTAATGAC AATTTATAAT 1222 .......... .......... .......... .......... .......... .......... 150 AATCAACAAT CAAAGGTCTA ATTATCCAGA TTATAAAGAA CTCAATAATC CTAGACCAAA 1282 .......... .......... .......... .......... .......... .......... 150 TCCATGATCC CAATACCTAG ATTGGGGATT TTTCCACCAT AATTCTCATA TCAAAACCCT 1342 .......... .......... .......... .......... .......... .......... 150 CCCACGTCAA TAATTACCCA AGGAACTAAG TTCTATGAAT TGAAACATGA ATTCGGCGAA 1402 .......... .......... .......... .......... .......... .......... 150 TAAAAACCTT ACCTTTAGCC TTAAGTATGG TGAAAAAACC TTCAAGAACA CACTTGGGGT 1462 .......... .......... .......... .......... .......... .......... 150 CGTTCCTTAG CTATCAAAGT TCAGAAGTGT ATAATAAAAC ATTTTTGAGG TTTTAAGTTG 1522 .......... .......... .......... .......... .......... .......... 150 GGAGTTAAAT AGTGTTTGTC CCGCTATGGC GACCCCAACC CGCCACAGCG GCTTCGCCCT 1582 .......... .......... .......... .......... .......... .......... 150 AGCAGAAATA ATCCAGCTAC AACGGCTTGC ACAGAAACAG TGAGCAAAAT TAATAATTCC 1642 .......... .......... .......... .......... .......... .......... 150 AAACCCCCAT TTCACAACAC ACCATTATCC CATGACACAC AAAAAATACA CATTCACGCT 1702 .......... .......... .......... .......... .......... .......... 150 AAGATCAATT CGGGAGTTCT ACTCACCTAA ATTCAATTAA GTAAAAAGTC GTACTAGATC 1762 .......... .......... .......... .......... .......... .......... 150 CTTAAAATCT TGCCTATCCA CTCATGTAAT CAAATTCATT TATAGATCTC TCATTTGTTA 1822 .......... .......... .......... .......... .......... .......... 150 TCATATTTTC TGATTTTGTC CAAATCTAAT ACTAGAGTAG AAAATCTCAA GTTACTACAA 1882 .......... .......... .......... .......... .......... .......... 150 AAAAATTTTT GGCCCCAATT CTTTCCCCGT TGGCTTTTTC CTAACGACGG AAATCAGGTC 1942 .......... .......... .......... .......... .......... .......... 150 GCTATAGATT CACTATTTAT AATTATTGAT TTATTGATTT AGATCTTGAT TTGACTATTT 2002 .......... .......... .......... .......... .......... .......... 150 TCTTATCGAG TGAATGAATA TATATAATAA ACATATATAT ATATATATAT ATATATATAT 2062 .......... .......... .......... .......... .......... .......... 150 ATATAAAATT TTAGTTTATT ATTGCAATTA CCGTTTAAGA AAAGGTTTGG TAATGTCATT 2122 .......... .......... .......... .......... .......... .......... 150 ACTTCAACCA CATCATTATT ATTTTTTTAT AATAAAAACA AAATTCTAAA TAAAAATTGG 2182 .......... .......... .......... .......... .......... .......... 150 ATTAAAATAA CTCACCCAAG TAAAGACCCG CCCAAAATTC CTATAACCCA TTAGTAATCC 2242 .......... .......... .......... .......... .......... .......... 150 AATACTTTCA TTCCCAATTT TGTTACGGGT GATAATGTTG TTTGTACTAT TCACAGATAG 2302 .......... .......... .......... .......... .......... .......... 150 TAATTATTGA AAAATTCTTT TTGCGGTCGT AAAGCCACTA CTGAGGAATT GGAAGGGAGG 2362 .......... .......... .......... .......... .......... .......... 150 GATAAACAAG CTTTTGCAAA AACATTAGAC GTGATGAAGT TTAGTTTTAT TTACGAAGCC 2422 .......... .......... .......... .......... .......... .......... 150 CTACTGTTTA AAAGTGATGA TATTATGCAT TAGTTCACAA ATATCAAATA GCAAATTCAA 2482 .......... .......... .......... .......... .......... .......... 150 ATTAGTTCAC AACTTTTGAA GTAATGCCAG AACATTAAAC TCATGTAACG ACCTGTTAGT 2542 .......... .......... .......... .......... .......... .......... 150 CGTTTTGAGC AGTAGAGTTT ATTTCTGGTA ATAACTGTCT GGGTTGACGG ATCCCACGAC 2602 .......... .......... .......... .......... .......... .......... 150 GGACCGTCAT GGGCACGACG GACCGTCGAG GGGGTCTCGT TCCAAAATAC TTAGTTTCTG 2662 .......... .......... .......... .......... .......... .......... 150 AAAAATTGGG TACTGAGAAC AACTCTCTGA ACTTCGCAAC GGAAGAGCAG GACGGACCGT 2722 .......... .......... .......... .......... .......... .......... 150 CGTAGGCACG ACGGACCGTC ACATGGTCTT AAATAAAAAT TGAGTCTCTG AACTCTGTAA 2782 .......... .......... .......... .......... .......... .......... 150 CGACTTAGCA GGACGGACTA TCGCAGGCAC GACGGACCGT CACAGACTGA GTAACCCTGA 2842 .......... .......... .......... .......... .......... .......... 150 CTGGGTCGGA TTTCTGTTAA AATTTTTTAA GGGGTGTTTT GGACTATTCC TGCTTATGAT 2902 .......... .......... .......... .......... .......... .......... 150 TATAAGGTTA GTGGTTTAAT GTTAATAATT CAATTTCTTG GGGGTTAAAG AAGACAACCT 2962 .......... .......... .......... .......... .......... .......... 150 TGGAATAAGT AATGGGTTAC TTTTAGCATC TTTTATACTT AATTATATGA TAAATAGGGT 3022 .......... .......... .......... .......... .......... .......... 150 AAAACAAAGG GATTTTGAAA GAGGAGAAAA TTAAAAAAAA AAAGAAAAAG AAGGGAGAAC 3082 .......... .......... .......... .......... .......... .......... 150 GAGTGAGAGG GAGAGAAGAA CGAAGAGGAA AGCAAAGAAC TTGAGGAGTA GCTTGCGTGA 3142 .......... .......... .......... .......... .......... .......... 150 TCACGAATTC TTCGCTGGAG GTAGGTTATG GTTTATGCTA TTTCATAGTA AACTCTTAAT 3202 .......... .......... .......... .......... .......... .......... 150 AGCGAATGAT ATGTGTTGGG TAGTATTGTA AAGTCTTCTA TATGCTTAAT TGTGTGCTTG 3262 .......... .......... .......... .......... .......... .......... 150 CATGACGTGA TTATATAATT GTGATAAAAT AAGCATGATG AGGCTATTGA ATCTTAAACC 3322 .......... .......... .......... .......... .......... .......... 150 TTAAGACCTC TTTGTTAATG ATGATGCCTT GGTATAAAAG AAGGCTTGAT GAACTGAAAG 3382 | | | | | || .......... .......... .......... .......... GTGCCACGTT CCGGTACCAG 170 AATGAGAATT AGGGGATCGG AGTGTCACGT TTCGACACCA GGATAG--TA TGGATCGGGT 3440 || ||||| | ||||||| |||||||||| | |||||||| |||||| | |||||||||| GAT-AGAATA TGAGGATCGG AGTGTCACGT TCCGACACCA GGATAGAAAA TGGATCGGGT 229 GTCACGTTCC GACACCAGGA TAGTAT-AG- ATCGG-GTGT CACGTTCCGA CACCAGGATA 3497 | |||||||| | ||||||| ||| || || ||||| ||| ||||||||| |||||||||| GCCACGTTCC GGTACCAGGA TAGAATGAGG ATCGGAGTGC CACGTTCCGG CACCAGGATA 289 G---TA-TGG ATCGG-GTGT CACGTTTTGA CACCAGGATA GTAAAGAGAA TGAATCTTGA 3552 | || || ||||| |||| ||||| || ||| || | ||||| || |||||||||| GAAATAGAGG ATCGGAGTGT CACGTACCGA CACAAGAGGA AGAAAGATAA TGAATCTTGA 349 ATTATGCT-A ATATACTCAG ATTTAATGAA CCTGTTTCCC AAATGAGTAT GGTGTGGAGG 3611 | || | | ||||||||| || ||||||| | | ||||| |||||||||| ||| | |||| AAGATAATGA ATATACTCA- ATCTAATGAA CTTAATTCCC AAATGAGTAT GGTATTGAGG 408 CTTGAGTCCT CATAGATGTG CTTGGGTTGT GCCCAATGGT -TATGGTACT TGTTGTTGTC 3670 |||||||||| ||| || | | |||||| | || | || |||| ||| CTTGAGTCCT CATGTGTGAA C-TCGGTTGT AGTTATTGAT GAATTCATGG TGTTATTGCT 467 ACCTGTTTAG TATTGTAGTT GATTTTATGT TATTATCTGA TATATATTGC TTTCTATTTT 3730 || |||| || |||||||||| || |||| | |||||| ||| |||||| || | ||||||| ACATGTTGAG TATTGTAGTT GA-TTTACAT TATTAT-TGA TATATACTGT TCCCTATTTT 525 GAGTTGGCCG ATGATACCTA CTCAGTACTT GTGCCTTGTA CTGACCCCTA CTTGTATGTT 3790 |||||||||| |||||| ||| |||||||| | ||| ||||| |||||||||| ||| ||||| GAGTTGGCCG ATGATATCTA CTCAGTACGT GTG-GTTGTA CTGACCCCTA CTTTCATGTT 584 TCTTTCTTTG TTATTTGTGG AGTGCAGCAA ACGTGCC-AC AACTTCGACT CAACCGCAAC 3849 | |||||| ||||||||| | |||||||| |||| || | |||||| ||| |||| | | TTCCTCTTTG TTATTTGTGT AATGCAGCAA ACGTTCCGTC AACTTCAACT CAACAGTAGA 644 TCTAGCCAGA CTTCAGCATA ATC--AGATT TCA-GGTGAG CTATTGTTCC TAGCTCGGAC 3906 ||||||||| ||||| | | ||| | | | ||| |||||| ||| || | ||||| |||| TCTAGCCAGT CTTCA-CTTC ATCGGAAAAT TCAGGGTGAG CTAATGCGTC TAGCTTGGAC 703 TGGATTCTTT CTTTCAGGTC TTGATGTCTT GAAGTTCGGA CATGGACCAT CTCTTTTATT 3966 ||| | | | |||| ||| |||||| ||| ||| ||| | ||||||| | || ||||| | TGGGTCTTCT TCTTCAAGTC TTGATGCCTT GAATTTCCGG CATGGACTAG CT-TTTTAGT 762 TATTTTAGCT TCTTAGATAC TCTTAGATTT AGTAATTTGA GGATAGATGT TCTTGTGATG 4026 |||||| | | ||||||| | || ||| || |||||||||| ||||||||| |||||||||| TATTTT-G-T TCTTAGACAT TCCTAG-TTA AGTAATTTGA -GATAGATGT TCTTGTGATG 818 ATGACTTCCA GATTTTGGGG ATAATGATAA 4056 |||||||||| |||||||||| ||||| |||| ATGACTTCCA GATTTTGGGG ATAATAATAA 848 hqPGS_C08HBa0294K15.1+_SGN-U335071- (3363 4056) ******************************************************************************** EST sequence 66 -strand 969 n (File: SGN-U335080-) 1 GTGGAGGTAG GTAATGGTTT AAGTATTTCC ATAGTAACTT TTAATAGCAA TTGATATGTA 61 TTGGGTAGTA TTGTAAAGTC TTTTATATGC TTAATTGTAT GCTTGCATGA TGTGATTATG 121 AAATTGTAAT GGGTTGGAAA GATAAGGTTG TGAAGCTTAA AACCTAAAAC CCTCTTTGTT 181 AATGATGATG TCTTGGTATA AAAGAAGGCT TGATGAACTA AAAGAATGAG GTTAGGGGAT 241 CGGGTGTCAC GAACCGACAC GTAGTATTAA TGGATCGGGT GTCACGAACC GACACATAGT 301 ATTAATGGAT CGGGTGTCAC GAATCGGCAC GTAGTATTAG GAGATCGGGT GTAACGAACC 361 GACACGTAGT ATTAGGGGAT CGGGTGTCAC GAACCGACAC GTAGCATTAG GGGATCGGAG 421 TATCACGTTC CGACACCACG ATAGTAAAAA GAATGAATCT TGAATTATGT TAATGTACTC 481 AATTTAATGA ACCTGTTTCC CAAATGAGTA TGGTGTGGAG GCTTGAGTCC TCATAGATGT 541 TCTTGGGTTG TGCCCAATGG TTATGGTACT TGTTGTTGTC ACCTGTTAAG TGTTATGGTT 601 GATTTTATTT TATTATTTGA TATATATTGT TCTCTATTCT GAGTTGGCCG ATGATATCTA 661 CTCAGTACTC GTGTTTGTAC TGACCCCTAC TTTTATGTTT TCTTTTTGTT AATTGTGGAG 721 TGCAGCAAAC GTACCGTCGT CTTCAACTCA ACCGCAACTC TAACCAGTCT TCATCACGTC 781 AGATTTCAGG GTGAGCTATT GTTCCTAGCT CGGACTGGAT TCTCTCTCAT TCATGTCTTG 841 ATGTCCTTGA AGATCAGACA TGCTGGTGCC GAATTCCTGC AGCCCGGGGG ATCCACTAGT 901 TCTAGAGCGG CAGCCACCGC GGTGANGCCG ATCGCATTGC ATTTCATTNN NNNNNNNGNA 961 NACTCTCGT Predicted gene structure (within gDNA segment 1019 to 5974): Exon 1 3373 3939 ( 567 n); cDNA 286 851 ( 566 n); score: 0.825 MATCH C08HBa0294K15.1+ SGN-U335080- 0.825 567 0.585 C PGS_C08HBa0294K15.1+_SGN-U335080- (3373 3939) Alignment (genomic DNA sequence = upper lines): GAACTGAAAG AATGAGAATT AGGGGATCGG AGTGTCACGT TTCGACACCA GGATAGTATG 3432 |||| || | || || ||| | ||||||| |||||||| ||| ||| | || || | GAACCGACA- CAT-AGTATT AATGGATCGG -GTGTCACGA ATCGGCACGT AG-TATTAGG 341 -GATCGGGTG TCACGTTCCG ACACCAGGAT AGTA-TAGAT CGGGTGTCAC GTTCCGACAC 3490 ||||||||| | ||| ||| |||| | | | || ||| |||||||||| | ||||||| AGATCGGGTG TAACGAACCG ACACGTAG-T ATTAGGGGAT CGGGTGTCAC GAACCGACAC 400 C-AGGATAGT ATGGATCGG- GTGTCACGTT TTGACACCAG GATAGTAAAG AGAATGAATC 3548 || || ||||||| || ||||||| ||||||| ||||||||| |||||||||| GTAGCAT-TA GGGGATCGGA GTATCACGTT CCGACACCAC GATAGTAAAA AGAATGAATC 459 TTGAATTATG CTAATATACT CAGATTTAAT GAACCTGTTT CCCAAATGAG TATGGTGTGG 3608 |||||||||| |||| |||| || ||||||| |||||||||| |||||||||| |||||||||| TTGAATTATG TTAATGTACT CA-ATTTAAT GAACCTGTTT CCCAAATGAG TATGGTGTGG 518 AGGCTTGAGT CCTCATAGAT GTGCTTGGGT TGTGCCCAAT GGTTATGGTA CTTGTTGTTG 3668 |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| AGGCTTGAGT CCTCATAGAT GTTCTTGGGT TGTGCCCAAT GGTTATGGTA CTTGTTGTTG 578 TCACCTGTTT AGTATTGTAG TTGATTTTAT GTTATTATCT GATATATATT GCTTTCTATT 3728 ||||||||| ||| || | | |||||||||| ||||||| | |||||||||| | | |||||| TCACCTGTTA AGTGTTATGG TTGATTTTAT TTTATTATTT GATATATATT GTTCTCTATT 638 TTGAGTTGGC CGATGATACC TACTCAGTAC TTGTGCCTTG TACTGACCCC TACTTGTATG 3788 ||||||||| |||||||| | |||||||||| | ||| ||| |||||||||| ||||| |||| CTGAGTTGGC CGATGATATC TACTCAGTAC TCGTG-TTTG TACTGACCCC TACTTTTATG 697 TTTCTTTCTT TGTTATTTGT GGAGTGCAGC AAACGTGCC- ACAACTTCGA CTCAACCGCA 3847 ||| | | || ||||| |||| |||||||||| |||||| || | |||| | |||||||||| TTT-TCTTTT TGTTAATTGT GGAGTGCAGC AAACGTACCG TCGTCTTCAA CTCAACCGCA 756 ACTCTAGCCA GACTTCAGCA TAATCAGATT TCA-GGTGAG CTATTGTTCC TAGCTCGGAC 3906 |||||| ||| | ||||| || ||||||| ||| |||||| |||||||||| |||||||||| ACTCTAACCA GTCTTCATCA -CGTCAGATT TCAGGGTGAG CTATTGTTCC TAGCTCGGAC 815 TGGATTCT-T -TCTTTCAGG TCTTGATGT- CTTGAA 3939 |||||||| | || |||| | ||||||||| |||||| TGGATTCTCT CTCATTCATG TCTTGATGTC CTTGAA 851 hqPGS_C08HBa0294K15.1+_SGN-U335080- (3373 3939) ******************************************************************************** EST sequence 24 +strand 809 n (File: SGN-U335078+) 1 NTTGAAAACA AAAGCTGGAG CTCCACCGCG GTGGCGGCCG CTCTAGAACT AGTGGATCCC 61 CCGGGCTGCA GGAATTCGGC ACCAGCCCTA ATCTACTTTG TTAATAATGA TGCCTTGGTA 121 TAAAAGAAGG CTTGATGAAC GAAAGTGGTG AGATTAGGGG ATCGGGTGCC ACGTTCCGGT 181 ACCAGGATAG AATATGGATC GGGTGTCACG TTCCGACACC AGGATAGAAT ATGGATCGGG 241 TGCCACGTTC CGGTACCAGG ATAGAATATG GATCGGGTGT CACGTTCCGA CACCAGGATA 301 GAATATGGAT CGGGTGTCAC GTTCTGACAC CAGGATAGAA TATGGATCGG GTGCCACGTT 361 CCGGTGCCAG GATAGTATAT TGAGGAGTGG AGTGTCACGT AAGGACACGA GGGGAATAAA 421 TATGATGAAT CTTGAAATAT GTTAATATAT GCAATCCAAT GAACTAAATT CCCAAATAAG 481 TATGATGAGG AGGTGTGAGT CCTCATTGAT GTGCTTGGTG ATGCAACCAA GGGTTATGGT 541 AATTGCAAAT GCTGCATGCT AAGGATATTA GTTAATTTTA TGATATTGCT TAATACATAC 601 TGGTATCTAT TTTGAGTTGG CCGACGATGT CTACTCAATA CCCGTGTTTT GTACTGACCC 661 CTACTTTTAT TGTTACTTCC TGGGTATTTG GGGAGAGCAG CAAACGTGCC GTCACCTTAT 721 ACTTCACCGT AACTCAAGGC TGGCTTTACT ACAATGGAAA ATTCAGGGGG GGCTGATGTT 781 TCCTACTGGG ACTTGGACAT TTTTTTTTG Predicted gene structure (within gDNA segment 1683 to 8958): Exon 1 3396 3920 ( 525 n); cDNA 270 806 ( 537 n); score: 0.710 MATCH C08HBa0294K15.1+ SGN-U335078+ 0.710 525 0.649 C PGS_C08HBa0294K15.1+_SGN-U335078+ (3396 3920) Alignment (genomic DNA sequence = upper lines): GGATCGGAGT GTCACGTTTC GACACCAGGA TAG--TATGG ATCGGGTGTC ACGTTCCGAC 3453 ||||||| || |||||||| | |||||||||| ||| ||||| |||||||||| |||||| ||| GGATCGG-GT GTCACGTTCC GACACCAGGA TAGAATATGG ATCGGGTGTC ACGTTCTGAC 328 ACCAGGATAG --TATAGATC GGGTGTCACG TTCCGACACC AGGATAG--T A-T--GGA-T 3505 |||||||||| ||| |||| ||||| |||| ||||| || ||||||| | | | ||| | ACCAGGATAG AATATGGATC GGGTGCCACG TTCCGGTGCC AGGATAGTAT ATTGAGGAGT 388 CGGGTGTCAC GTTTTGACAC CAGGATAGTA AAGAGAATGA ATCTTGAATT ATGCTAATAT 3565 | ||||||| || ||||| ||| | || || | |||| |||||||| | ||| |||||| GGAGTGTCAC GTAAGGACAC GAGGGGAATA AATATGATGA ATCTTGAAAT ATGTTAATAT 448 ACTCAGATTT AATGAACCTG TTTCCCAAAT GAGTATGGTG TGGAGGCTTG AGTCCTCATA 3625 | || || ||||||| ||||||||| |||||| || ||||| || ||||||||| ATGCA-ATCC AATGAACTAA ATTCCCAAAT AAGTATGATG AGGAGGTGTG AGTCCTCATT 507 GATGTGCTTG G-GTTGTGCC CAATGGTTAT GGTACTTGTT GTTGTCACCT GTTTAGTATT 3684 |||||||||| | | || | ||| |||||| |||| ||| || | | | | || || GATGTGCTTG GTGATGCAAC CAAGGGTTAT GGTAATTGCA AATGCTGCAT GCTAAGGATA 567 GTAGTTGATT TTATGTTATT ATCTGATATA TATTGCTTTC TATTTTGAGT TGGCCGATGA 3744 ||||| ||| ||||| |||| | ||| | || || | || |||||||||| ||||||| || TTAGTTAATT TTATGATATT GCTTAATACA TACTGGTATC TATTTTGAGT TGGCCGACGA 627 TACCTACTCA GTACTTGTGC CTTGTACTGA CCCCTACTTG TATGTTTCTT TCTTTGTTAT 3804 | ||||||| ||| ||| ||||||||| ||||||||| ||| || | || | | ||| TGTCTACTCA ATACCCGTGT TTTGTACTGA CCCCTACTTT TATTGTTACT TCCTGGGTAT 687 TTGTGGAGTG CAGCAAACGT GCC-ACAACT TCGACTCAAC CGCAACTCTA GCCAGACTTC 3863 ||| |||| | |||||||||| ||| || || | ||| || || ||||| | | | | ||| TTGGGGAGAG CAGCAAACGT GCCGTCACCT TATACTTCAC CGTAACTCAA GGCTGGCTTT 747 AGCATAAT-C AGATTTCA-G GTGAGCTATT GTTCCTAGCT CGGACTGGAT TCTTTCTTT 3920 | | ||| | | |||| | | | ||| | ||| | || ||||| | ||| ||| ACTACAATGG AAAATTCAGG GGGGGCTGAT GTTTCCTACT GGGACTTGGA CATTTTTTT 806 hqPGS_C08HBa0294K15.1+_SGN-U335078+ (3396 3920) ******************************************************************************** EST sequence 16 +strand 1490 n (File: SGN-U335075+) 1 NGCCATGGGG NNGGGCAGAG ATGTATGACT CCTATGGGCG AATGGCGGCA AATCGGCCGA 61 ATTGATCGTC CCTCTCTCTC TGTCATCGTC CCTCTCTCTC TCATCATTCC TCTCTACCAG 121 CATTCTCCAT CTCCTCTCTC CGCCGTCATC TTCTTCATCT TCATCTCCGC CGTCGTCTTC 181 TCCATTCTCC ATCTCCTCCG TCGTCTTCTC CATTCTCCAT CTCCTCTCTT CGCCGCCAGC 241 TCCATCTCTG CGCGCCATTT GCAGTCGGGC CTCAGCAGGT GGAGGTCGCG CCGCCTCCAT 301 CTCCGCCGAG TCGTGCAGCA GCAACAGTGG TCGACGTTCC CAACCCTTTG ACTCCAGCAA 361 ACGTGCCGTC ATCTTCAACT CAACCGCAAC TCTAGCCAGT CTTCATTACA CCAGATTTCA 421 GGGTGAGCTA ATGCTTCTAG CTTGGACTGG ATCTTCCTCT TCATGTCTTG ATGCCTTGAA 481 CTTCCGGCAT GGACTAGCTT TTTACTTATT CTAGATTCTT AGATACTCTT AGCTTATTTG 541 AGGATAGATG TTCTTGTGAT GATGACTTCC AGATTTTGGG AATAATGATA AGTTTGAGTT 601 TTAGAAGTTG ATTAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAACGNNCAA 661 AGGGGGCCCC TGGGAAAATT TGAAGGACCC CCAAAAAAAG CGGGGAAAAG GGGGGAAAAA 721 GGGGGCCCAA GGGGAAAATG GGGACACAAA AAAAAACCAA AAAANNNNNN NNNNNCNACA 781 AANNNTCCGG GGGGAAAANN ATTTCAACAA AAAAAANNNN NGNCCCCNAA TACCCCCAAA 841 AAAATAATAG CNCNANACAT CGTAANTTGA TTAAAGAAGG ACAATAATAC TCTATTACAT 901 TTAAATACAA CCTGAATAAG CACCACATAA AGAATATTAC AACCAATATT GTCATTCACC 961 ACCCTAATAA AGTATAAAGA AAACCGTAAA ATAAACATGA CAATTCAAAA GACGATCAAA 1021 AGTGCAAAAC CCAGAAATAT AGAGCGGAAA TCAATCGATT ATCTAGACAT ATACCTAACA 1081 CATAATGACA TGCCATTACA ACCTTTCTAC TATTAAAGTA ATACATACAC TACCAACGTC 1141 ATCCTAAAAG ATATAATTAA GATATTTAGA ACATATATTA GCGCAGCATA TATTATAATA 1201 AAAAGTACAA CGATAGCGAG TAAAAAGATA AAAATCTAAT CATTTACCAT CGGCAGCAGA 1261 CACGCCAATA AATAGATGAC ATACATATTT TATTAGGATA AAACTGTCCG TACTATAACG 1321 TACGAATATA CACATTAAAT TAAGTCACCT GAGGAACACT GTCAAACTAC GTGATATACC 1381 GATCCGAATC TCTAATATAT ACCATATGAA ACACATATAC ACGTAGTAAN ATAATATATA 1441 CTACTCAATA ATTAGCAACG AACACCCGAC TACTCTATTA TATATAATAA Predicted gene structure (within gDNA segment 1 to 13219): Exon 1 3815 4075 ( 261 n); cDNA 355 609 ( 255 n); score: 0.841 Intron 1 4076 9837 (5762 n); Pd: 0.000 (s: 0.96), Pa: 0.782 (s: 0.62) Exon 2 9838 9905 ( 68 n); cDNA 610 677 ( 68 n); score: 0.574 Intron 2 9906 11062 (1157 n); Pd: 0.000 (s: 0.62), Pa: 0.981 (s: 0) Exon 3 11063 11088 ( 26 n); cDNA 678 703 ( 26 n); score: 0.538 Intron 3 11089 12388 (1300 n); Pd: 0.000 (s: 0), Pa: 0.990 (s: 0.62) Exon 4 12389 12435 ( 47 n); cDNA 704 750 ( 47 n); score: 0.617 MATCH C08HBa0294K15.1+ SGN-U335075+ 0.786 402 0.270 C PGS_C08HBa0294K15.1+_SGN-U335075+ (3815 4075,9838 9905,11063 11088,12389 12435) Alignment (genomic DNA sequence = upper lines): CAGCAAACGT GCC-ACAACT TCGACTCAAC CGCAACTCTA GCCAGACTTC AGCATAATCA 3873 |||||||||| ||| || || || ||||||| |||||||||| ||||| |||| | | | || CAGCAAACGT GCCGTCATCT TCAACTCAAC CGCAACTCTA GCCAGTCTTC ATTA-CACCA 413 GATTTCAGG- TGAGCTATTG TTCCTAGCTC GGACTGGATT CTTTCT-TTC AGGTCTTGAT 3931 ||||||||| ||||||| || | |||||| |||||||| | ||| || ||| | |||||||| GATTTCAGGG TGAGCTAATG CTTCTAGCTT GGACTGGA-T CTTCCTCTTC ATGTCTTGAT 472 GTCTTGAAGT TCGGACATGG ACCATCTCTT TTATTTATTT TAGCTTCTTA GATACTCTTA 3991 | |||||| | || | ||||| || | || || ||| ||||| ||| |||||| |||||||||| GCCTTGAACT TCCGGCATGG ACTAGCT-TT TTACTTATTC TAGATTCTTA GATACTCTTA 531 GATTTAGTAA TTTGAGGATA GATGTTCTTG TGATGATGAC TTCCAGATTT TGGGGATAAT 4051 | | | | |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| G--CT--T-A TTTGAGGATA GATGTTCTTG TGATGATGAC TTCCAGATTT TGGGAATAAT 586 GATAAGTTTT GAGTTTTAGA AGTTAATTAT TGATTTCGTT AATGAGTTTT AAGTTTTCCG 4111 |||||| ||| |||||||||| |||| GATAAG-TTT GAGTTTTAGA AGTT...... .......... .......... .......... 609 TATTATATTC TGTTTATTAT GGTTGAAATG TTGGGGTTTA GATTGGTTGG TTCGCTCACA 4171 .......... .......... .......... .......... .......... .......... 609 TAGGAGGGTA AGTGTGGGTG CCACTCACGG CTCGTTTTGG GTCGTGACAA ACTTGGTATC 4231 .......... .......... .......... .......... .......... .......... 609 AGAGCATTAG GTTCGTTGGT CTCATCACAC AAGAACAAGT CTAGTAGAGT CTTGAGGAAT 4291 .......... .......... .......... .......... .......... .......... 609 GGTAGGGGGA CGCCTTTACT TTTCTTTGAG AGGCTATAAG ACTTAAGGAA AATTCCATTC 4351 .......... .......... .......... .......... .......... .......... 609 TTTCTTTCTT TCGTGCTATT ACTTGGATCC AATTGGTATC TAGGTGATAC AAATTGGTAT 4411 .......... .......... .......... .......... .......... .......... 609 CTGACCATCT TCACTCTATT TCGCAGATGG TTAGAACTAG AGCAACAGCT GCGCCGACAC 4471 .......... .......... .......... .......... .......... .......... 609 CAACACCGGC AAAACAAGAT GCGTCTGAAC CAGCCACTGA GGCTGTAGCT CGAAGAGGAG 4531 .......... .......... .......... .......... .......... .......... 609 CAGTGGCAAG AGGCCGCGGT AGAGGGTACT AGGGCGGTGA CTCCTCCACC GACTGAGGAA 4591 .......... .......... .......... .......... .......... .......... 609 GTATTAAGAG AGGGTGAGGA AGGGGGAAAT GAACAAGTGC AGAACGAGGA ATTACCACCC 4651 .......... .......... .......... .......... .......... .......... 609 CAACCTACCC TAGAGATGAT TAATCAGGTT CTTGCTTATC TTAGCGGGTT ATCTGATCAA 4711 .......... .......... .......... .......... .......... .......... 609 GGCCAGACAC CTCCAGTGTT TTCTGCACCA GTACCTCAGG TTCCGGGAGT ACAACATACA 4771 .......... .......... .......... .......... .......... .......... 609 GCTGCTGTGG CTCCCCGCAT GGATGCCTCA TTGGAAATAG GCACGTTTCC TCGGTTGACT 4831 .......... .......... .......... .......... .......... .......... 609 ACAGGGCCTA TAATGACAAG TGACCAGCAC GAACTTTTCA GTAAGTTCTT GAAGTTGAAA 4891 .......... .......... .......... .......... .......... .......... 609 CCTCCAGTTT TCAAGGGTGC TGAATCTGAG GATGCCTATG ACTTTCTGGT TGATTGTCAT 4951 .......... .......... .......... .......... .......... .......... 609 GAGTTGCTAC ATAAGATGCG CATAGTGGAA CGATTTGGCG TTGAGTTTGT GACCTATCAG 5011 .......... .......... .......... .......... .......... .......... 609 TTTTAGGGGA ACGCCAAAAT GTGGTGGCGG TCATATGTTG AGTGTCAACC AGCACAGTCA 5071 .......... .......... .......... .......... .......... .......... 609 CCACCTATGA CTTGGGCATC ATTCTCTAGC TTGTTTATGG AGAATTATAT ACCTCGGACT 5131 .......... .......... .......... .......... .......... .......... 609 TTGAGGGATA GGAGGAGAGA TAAGTTCCTG AGCTTAGAGC AAGGCAGGAT GTCGGTTACT 5191 .......... .......... .......... .......... .......... .......... 609 GCTTATGAGG CTAAGTTTTG TGCACTATCC AGGTATGCCA CCCAGCTTTG CTTCAGTCCA 5251 .......... .......... .......... .......... .......... .......... 609 CAAGAGCGGA TTCGTCGTTT CGTGAAAGGG TTGAGGTCAG ATTTGCGGAT TTCAGCCTTA 5311 .......... .......... .......... .......... .......... .......... 609 CAGGTAGCTG CTGCAGCAAA ATCCTTTCAG GAGGTGGTAG ATTTTGTAAT AGAAGTGGAG 5371 .......... .......... .......... .......... .......... .......... 609 GGAGTGAAGC CAGACGACTT CACCATGGCA TCAATATCTA AGAAGTTTCA TAAAGGAGGT 5431 .......... .......... .......... .......... .......... .......... 609 GATTTTAATG GTTTTTAATC CAGAGGGCAG AGTTCAGGAG GTTATCCAGC CCGACCTATT 5491 .......... .......... .......... .......... .......... .......... 609 CAGTCTTCAC TACAAGCTGT AGCTGGGGGT CCACCGCAGA CCGGTCAACA TTTCTCTGAG 5551 .......... .......... .......... .......... .......... .......... 609 TTTGGAGGTT ATCCCCAGAC TCTGTCGTTC TCATAGAGAC CTATGCTTTA ATCAAGAGAG 5611 .......... .......... .......... .......... .......... .......... 609 TGTTATGGAT GTGGAGAGAC TGGACATATT AAGAGGTATT GTCCAAAACA GAGTTACAGA 5671 .......... .......... .......... .......... .......... .......... 609 CCCCCAATAG TCAGAGGTAG AGGTGGTCAT GGGAGAGGTC GCTATTCTGG AGGACGTGGT 5731 .......... .......... .......... .......... .......... .......... 609 GGCCGAGGTA ATGGTGGTCA CCAAAACGGC CGGGGTGACA GGCAAACTGG AACTTCTGTA 5791 .......... .......... .......... .......... .......... .......... 609 GCTCAACATT GTAGGGGCAA CGGGCAGACC GGTGATAGGG CCCATTGTTA TGCTTTCCCT 5851 .......... .......... .......... .......... .......... .......... 609 GGGAGGTCTG AAGCGGAGAC ATCTGATGCC GTCATCACAG GTAATCTTTT GGTTTGTGAT 5911 .......... .......... .......... .......... .......... .......... 609 TGCATGGCTT CTGTATTGTT TGATCCTGGA TCCACATTTT CATATGTATC TTCCTCATTT 5971 .......... .......... .......... .......... .......... .......... 609 GCTACTGGTC TTAATTTACA TTATGAATTG CTTGACATAC CTATTCGTGT TTCTACTCCG 6031 .......... .......... .......... .......... .......... .......... 609 GTGGGTGAGT CTGTGATAGT TGAAAAAGTG TATAGGTCTT GTCTTGTGAC TTTTGTGGGG 6091 .......... .......... .......... .......... .......... .......... 609 AACAATACTC ATGTAGACTT GGTTATCTTA GAAATGGTTG ACTTCGATGT AATTCTGGGT 6151 .......... .......... .......... .......... .......... .......... 609 ATGACTTGGC TGTCTCCAAA TTTTGCAATC TTAGATTGTA ATGCTAAAAC TGTAACGTCG 6211 .......... .......... .......... .......... .......... .......... 609 GCCAAGCCTG GGACAGATCC GTTAGTGTGG GAGGGTGACT ACACTTCCAC TCCATTTCGT 6271 .......... .......... .......... .......... .......... .......... 609 ATTATCTCCT TTCTTCGTGC TAAGAGAATG GTTAGTAAGG GTTGTTTAGC TTTCTTGACA 6331 .......... .......... .......... .......... .......... .......... 609 CACCTCTAGG ATGATACTAC CCAAGTACCT TCAATTGAGT CGATTTCGAT AGTCCGTGAG 6391 .......... .......... .......... .......... .......... .......... 609 TTTCTAGATG TGTTTCCTGC AGACCTTCCT CGTATGCCAC CGAATAGAGA TATTTATTTC 6451 .......... .......... .......... .......... .......... .......... 609 TGTATTGATC TGGAGCCGGG TACTCGCCCC ATTTCCATAC CCCATTATAG GATGGCTCCC 6511 .......... .......... .......... .......... .......... .......... 609 GCTGAGTTAA GAGAGTTAAA GGCCCAACTT CAAGAGTTGT TAAGCAAAGG CTTTATTAGA 6571 .......... .......... .......... .......... .......... .......... 609 CCAAGTGCAT CCCCTTGGGG TGCTCCTATT TTATTTGTGA AGAAGAAGGA TGGAAGTTTT 6631 .......... .......... .......... .......... .......... .......... 609 CGGATGTGCA TAGACTATAG GCAACTGAAT AAGGTAATCA TTAAGAACAA GTATCCTCTT 6691 .......... .......... .......... .......... .......... .......... 609 CCTCGCATCG ATGATTTGTT CGATCAGTTA CAAGGTGCTT GTACCTTCTA AAAAATTGAT 6751 .......... .......... .......... .......... .......... .......... 609 TTGAGATCTG GTTATCATCA ATTAAAAATA CGGGCAACGG ATGTGCCCAA GACTGCTTTT 6811 .......... .......... .......... .......... .......... .......... 609 TGGACCACGT ATGGGCATTA TGAGTTCCTA GTAATGTCTT TTGGGCTTAC GAATTCCCCT 6871 .......... .......... .......... .......... .......... .......... 609 GCTGCTTTCA TGAGCTTAAT GAGCGGGATT TTTAAGCCAT ATCTGGATCT CTTCGTCATT 6931 .......... .......... .......... .......... .......... .......... 609 GTATTCATCG ATGACATACT GGTATACTCA AAGAGCAAGA AAGAACATGA GGAGCACTTG 6991 .......... .......... .......... .......... .......... .......... 609 AGAATGGTAT TGGAAATGTT GAGGGAGAAA GAGCTTTATG CCAAATTCTC TAAGTGTGAG 7051 .......... .......... .......... .......... .......... .......... 609 TTTTGGCTAG ATTCAGTGTC CTTCTTGGGG CGTGTGGTTT ATAAGGATGA AGTGATGGTG 7111 .......... .......... .......... .......... .......... .......... 609 GATCCTTCTA AGGTCGAAGC AGTGAAGAGT TGGGTAAGAC CTACTAATGT TACAGAGGTA 7171 .......... .......... .......... .......... .......... .......... 609 AGGAGCTTCG TTGGTTTAGC TAGCTACTAC CGTCGATTTG TCAAGGGATT TTCTTCTGTT 7231 .......... .......... .......... .......... .......... .......... 609 GCTTCTCAAT TGACAAACTT GACTAAGCAG AGTGTTCCAT TTGTATGGTC GGACGAGTGT 7291 .......... .......... .......... .......... .......... .......... 609 GAAGAAAGCT TTCAAAAGCT CAAGACCTTG TTGACTACTG CACCAATTCT TACCCTGCTA 7351 .......... .......... .......... .......... .......... .......... 609 GTGGAAGGTA AGAATTTCAT TGTTTATTGT GATGCATCCT ATTTTGGTTT GGGTGCAGGG 7411 .......... .......... .......... .......... .......... .......... 609 CTAATGCAAG AGAAGAATGT AATTGCTTAT GCTTCGAGGC AATTAAAGGT GCATGAACGT 7471 .......... .......... .......... .......... .......... .......... 609 AATTATCCAA CCCATGATTT GGAGTTGGCT GCGGTAGTGT TTGCATTAAA GCAATGGAGA 7531 .......... .......... .......... .......... .......... .......... 609 CATTATCTAT ATGGGGTTAA GTGTGAAGTC TATACGGATC ATCGTAGTTT ACAGTATATC 7591 .......... .......... .......... .......... .......... .......... 609 TTTACTCAGA AAGATTTGAA TTTGAGACAG AGGAGATGGA TGGAACTACT GAAGGACTAT 7651 .......... .......... .......... .......... .......... .......... 609 GATATCACTA TCTTGTATCA TCCGGAAAAA GCTAATGTTG TGGCAGATGT TTTAAGTAGA 7711 .......... .......... .......... .......... .......... .......... 609 AAGGCAGGGA ACATGGGAAG TCTAGCCCAC TTGCAGGTTT CTAGACGCCC ATTGGCTAGA 7771 .......... .......... .......... .......... .......... .......... 609 GAGGTTCAGA CTCTGGATAA TGACCTTATG AGGCTAGAAG TAAATGAGAA GGGAGGATTT 7831 .......... .......... .......... .......... .......... .......... 609 TTGGTCTGTG TGGAGGCAAG ATCTTCCTTT CTTGATAAGA TTAAAGGAAA GCAGTTTACC 7891 .......... .......... .......... .......... .......... .......... 609 GATGAGAAAC TGATCTGGAT CCGAGATAAG GTGTTGCGAG GAGAGGTTAA AGAAGCAAAA 7951 .......... .......... .......... .......... .......... .......... 609 ATCGATGAGG AAGGTGTTTT GAGGATTAAG GGAAGGGTAC GTGTACCCCG CGTCGATGAC 8011 .......... .......... .......... .......... .......... .......... 609 TTGATTCACA CTGTTCTTAC AGACGCTCAT AGTTCAAGGT ATTCTATACA TCCTGGTGCA 8071 .......... .......... .......... .......... .......... .......... 609 ACCAAGATGT ATCGTGATCT AAAGCAACAT TTTTGGTGAA GTAGGATGAA GCGTGACATT 8131 .......... .......... .......... .......... .......... .......... 609 GTTAATTTTG TTGCTCAATG CCCGAATTGT CTGCAGGTAA AGTATGAACA CCAGAGGCCT 8191 .......... .......... .......... .......... .......... .......... 609 GGAGGGACAC TTCAGAGAAT GCCCATTCCT GAATGGAAGT GGGAGAGAAT TGCAATGGAC 8251 .......... .......... .......... .......... .......... .......... 609 TTCGTGGTTA GTCTTCCAAA GACAACGGGT AAGTATGACT CCATTTGGGT AATTGTTGAC 8311 .......... .......... .......... .......... .......... .......... 609 AGATTAACTA AGTCTGCTCA TTTCATTCCG GTCAAGGTGA CTTATAATGC AGAGAAGTTA 8371 .......... .......... .......... .......... .......... .......... 609 GCCAAACTTT ACATCTCAGA AATTGTTCGA TTGCATGGAG TTCCACTTTC CATTATATCA 8431 .......... .......... .......... .......... .......... .......... 609 GATAGAGGTA CGCAGTTTAC TTCTAAATTT TGGAGAATAT TGCATGCCGA ATTAGGTACT 8491 .......... .......... .......... .......... .......... .......... 609 AGGTTGGATC TTAGTACTGC ATTTCACCCT CAGACTGATG GTCAGTCTGA GCGAACGATT 8551 .......... .......... .......... .......... .......... .......... 609 CAGGTTTTGG AGGATATGCT TCATGCATGT GTGATAGGGT TTGGTGGTCA TTGGTATAAC 8611 .......... .......... .......... .......... .......... .......... 609 TTCTTACCCT TAGCAGAGTT TTCATACAAC AATAGCTATC ACTCAAGTAT TGATGTGGCC 8671 .......... .......... .......... .......... .......... .......... 609 CCATTTGAGG CACTGTATGG GAGAAGATGT AGGTCTCCCA TTGGTGGTTT GATGCATTTG 8731 .......... .......... .......... .......... .......... .......... 609 AGGTTAGACC TTGGGGTACT GACCTTCTGA GGGAATCGCT AGATAAAGTG AAATGCATTC 8791 .......... .......... .......... .......... .......... .......... 609 AAGAAAAGCT TTTAGCGGCT CAAAGTAGAC AAAAAGAATA TGCAGATCGA AAGGTTAGAG 8851 .......... .......... .......... .......... .......... .......... 609 ACTTGGAGTT TATGGAGGGT GAGCAAGTTT TGCTGAAGGT TTCACCCATG AAAGGGGTGA 8911 .......... .......... .......... .......... .......... .......... 609 TGCGGTTTGG TAAGCTTAGT CCGAGGTATA TTGGTCCATT TGAAGTTCTG AAGCGCGTGG 8971 .......... .......... .......... .......... .......... .......... 609 GGGAGGTAGC GTATGAATTA GCCTTGCCCC CAGGACTGTC AGGATTGCAC CCGGTATTTC 9031 .......... .......... .......... .......... .......... .......... 609 ATGTGTCTAT GTTGAAAAGA TACCATGGGG ATGGAAACTA CATCATTCGT TGGGATTCAG 9091 .......... .......... .......... .......... .......... .......... 609 TTCTTCTTGA TGAGAATTTG TCTTATGAGG AGGAGCCTGT TGCTATCTTA GATAGAGAAG 9151 .......... .......... .......... .......... .......... .......... 609 TACGCAAGCT GAGGTCAAGG GAGATTGCAT CCATCAAGGT TCAATGAAAG AATCGACCAA 9211 .......... .......... .......... .......... .......... .......... 609 TTGAAGAGTC CACTTGGGAG AAGGAGGCTG ATATGCAAGA AAAATACCCA CACCTGTTTA 9271 .......... .......... .......... .......... .......... .......... 609 CAGATTCAGG TACTCCTTTT CGCCCTTGTT TTTCTTCTTG TGATCGTTCA AGGACGAACG 9331 .......... .......... .......... .......... .......... .......... 609 ATGGGTAAAT TGGTGTCTAT TGTAACGACC TGTTAGTCGT TTTGAGCAGT AGAGTTTATT 9391 .......... .......... .......... .......... .......... .......... 609 TCTGTTAATA ACTGTCTGGG TCGATGGATA CCACGACGGA CCGTCGAGGG GGTCTCGTTC 9451 .......... .......... .......... .......... .......... .......... 609 CAAAACACTT AGTTTCTGAA AAATTGGGTA CTGAGAACAA CTCTCTGAAC TTCGCAATGG 9511 .......... .......... .......... .......... .......... .......... 609 AAGAGCAGGA CGGACCGTCG TAGGCACGAC GGACCGTCAC ATGGTCTTAA ATAAAAATTG 9571 .......... .......... .......... .......... .......... .......... 609 AGTCTCTAAA CTCTGTGACG ACTTAGCAGG ACGACCGTCG CAGGCACGAA GGACCGTCAC 9631 .......... .......... .......... .......... .......... .......... 609 AGACTGCGTA ACCCTGACTG GGTCGGATTT CTGTTAAAAG TTTTTAAGGG GTGTTTTGGA 9691 .......... .......... .......... .......... .......... .......... 609 TTATTCCTGC TTATGATTAT AAAGTTAGTG GTTTAATGTT AATAATTCAA TTTCTTGGGG 9751 .......... .......... .......... .......... .......... .......... 609 GTTAAAGGAG ACAACCTTGG AATAAGTAAT GGGTTACTTT TAGCATCTTT TATACTTAAT 9811 .......... .......... .......... .......... .......... .......... 609 TATATGGTAA TTAAGGTAAA ACAAAGGGAT TTTGAAAGAG GAGAAAATTA AAAAAGAAAA 9871 | | ||| | | |||| | ||||| |||| .......... .......... ......GATT AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA 643 AGAAAAAGAA GGGAGAACGA GCGAGAGGGA GAGAAGAACG AAGAGGAAAG CAAAGACCTT 9931 | ||||| || | || | | | | || | AAAAAAAAAA CGNNCAAAGG GGGCCCCTGG GAAA...... .......... .......... 677 GAGGAGTAGC TTGCGTGATC ACGAATTCTT CGGTGGAGGT AGGTTATGGA TTATGCTATA 9991 .......... .......... .......... .......... .......... .......... 677 GTAAACTCTT AATAGCGAAT GATATGTGTT GGGTAGTATT GTAAAGTCTT CTATATGCTT 10051 .......... .......... .......... .......... .......... .......... 677 AATTGTGTGC TTGCATGACG TGATTATATA ATTGTGATAA AATAAGCATG ATGAGGCTGT 10111 .......... .......... .......... .......... .......... .......... 677 TGAATCTTAA ACCTTAAAAC CTCTTTGTTA ATGATGATAC CTTGGTATAA AAGAAGGCTT 10171 .......... .......... .......... .......... .......... .......... 677 GATGAACTGA AAGAATGAGA ATTAGGGGAT CGGAGTGTCA CATTCCGACA CCAGGATAGT 10231 .......... .......... .......... .......... .......... .......... 677 ATGGATCGGG TGTCACGTTC CGACACCAGG ATAGTATGGA TCGGGTGTCA CGTTCCGACA 10291 .......... .......... .......... .......... .......... .......... 677 CCAGGATAGT ATGGATCGGG TGTCACGTTC GACACCAGGA TAGTATGGAT CGAGTATCAC 10351 .......... .......... .......... .......... .......... .......... 677 GTTCCGACAC CAGGATAGTA GAGGATCAGA GTGTCACGTT CCGACACCAG GATAGTATGG 10411 .......... .......... .......... .......... .......... .......... 677 ATCGGGTGTC ACGTTTTGAC ACCAGGATAG TAAAAAGAAT GAATCTTGAA TTATGCTAAT 10471 .......... .......... .......... .......... .......... .......... 677 ATACTCAAAT TTAATGAACC TGTTTCCCAA ATGAGTATGG TGTGGAGGCT TGAGTCCTCA 10531 .......... .......... .......... .......... .......... .......... 677 TAGATGTGCT TGGGTTGTGC CCAATGGTTA TGGTACTTGT TGTTGTCACC TGTTGAGTAT 10591 .......... .......... .......... .......... .......... .......... 677 TGTAGTTGAT TTTATGTTAT TATCTGATGT ATATTGTTTT CTATTTTGAG TTGGCCGATG 10651 .......... .......... .......... .......... .......... .......... 677 ATACCTACTC AGTACTTGTG CCTTGTACTG ACCCCTACTT GTATGTTTCT TTCTTTGTTA 10711 .......... .......... .......... .......... .......... .......... 677 TTTGTGGAGT GCAACAAACG TGCCAACAAC TTCGACTCAA CCACAACTCT AGCCAGACTT 10771 .......... .......... .......... .......... .......... .......... 677 CAGCATAATC AGATTTCAGG GTGAGCTATT GTTCCTAGCT CGGACTGGAT TCTTTCTTTC 10831 .......... .......... .......... .......... .......... .......... 677 AGGTCTTGAT GTCTTGAAGT TCGGACATGG ACCATCTCTT TTATTTATTT TAGCTTCTTA 10891 .......... .......... .......... .......... .......... .......... 677 GATACTCTTA GATTTAGTAA TTTGAGGATA GATGTTCTTG TGATGATGAC TTCCAGATTT 10951 .......... .......... .......... .......... .......... .......... 677 TGGGGATAAT GATAAGTTCT GAGTTTTAGA AGTTAATTAT TGATTTCGTT AATGAGTTTT 11011 .......... .......... .......... .......... .......... .......... 677 AAGTTTTCCG CATTATATTC TGTTTAATAT TGTTGAAATG TTGGGGTTTA GATTGGTTGG 11071 ||| | || .......... .......... .......... .......... .......... .ATTTGAAGG 686 TTCTCTCACA TAGGAGGGTA AGTGTGGGTG CCACTCACGG CTCGTTTTGG GTCGTGACAA 11131 | | | | | | || ACCCCCAAAA AAAGCGG... .......... .......... .......... .......... 703 CTCATCTATG CCCTACCATT TAAAATAACC CAGTAGAAAG TGGCAAAGAT TATTTGTTCA 11191 .......... .......... .......... .......... .......... .......... 703 TTTTTTACAT GTAAAATTGA ATTTTATTTC GGAGGTTCTT TACTTGGGTG TGTTATTTTT 11251 .......... .......... .......... .......... .......... .......... 703 ATTTCAAAAT TTTATTTTTT TAAATTAAAA TATAGTGATG TGGTCAAAAT ATAATTGACC 11311 .......... .......... .......... .......... .......... .......... 703 ACGTGTAAAA AAATAATTTT ACAACATCAG TGTTAAAAAA TAATGGTATG AATGAGCCTT 11371 .......... .......... .......... .......... .......... .......... 703 TTCTTAAACG GTAATGGCAT TAATGAGTCA AACTTTTAAC AAATGATATA AATAAGTTGT 11431 .......... .......... .......... .......... .......... .......... 703 TTCTGAAATT CAATGGCATA TTTGAGATTT TCACTTAATT TAATAAAAGA AAAATTGCAT 11491 .......... .......... .......... .......... .......... .......... 703 GTAATTTCTG CAAGTTTTTG ACTAGTCATT TCATTTTAGG TTTGACTTTA GTCATGATTG 11551 .......... .......... .......... .......... .......... .......... 703 AATTTTATTT TATTCAAATA TAATACAAAA GAAAAAGAAA ATAGGAGTAT AGTAAAGTGT 11611 .......... .......... .......... .......... .......... .......... 703 AGTTGTCTTT TGTGACTTTG GTCCGCCCAC CTGCTGCTTA TTCCCTCCGA GCCATGATAA 11671 .......... .......... .......... .......... .......... .......... 703 TAATAATATG CGAAGTTTAA AAGCCCCCTC AACCTATACC CGAAATTCCA ACTACACACT 11731 .......... .......... .......... .......... .......... .......... 703 CTAACTTCAC GGGTGTCGCA TTACCCATCT AAGCTATATT TTTATTTATT TTTTACCCAC 11791 .......... .......... .......... .......... .......... .......... 703 CTAAGTGCTG ACCTATCATT GGAGGTGTTA TCACCGCCTC TAGGCGCGTT TGAAGCAAAA 11851 .......... .......... .......... .......... .......... .......... 703 TTTGATGAAA ATTTTCCCCC TTCTCCTATA GTCATCTTCC CCACTTTTAA ATACTCATTA 11911 .......... .......... .......... .......... .......... .......... 703 CTTCTTCTTC GCCCACCATT AATCCTTGTT TCTTTAGTAA AAAATTCACG AATTCCTCTC 11971 .......... .......... .......... .......... .......... .......... 703 AAAATGAAGT AGGGTTTAGT TGTTAATGTT CATTTGTACT TCAAATCTTG AATTTAAGGT 12031 .......... .......... .......... .......... .......... .......... 703 TTGTAATCTG ATCTAATTTC TTATTTAGAT TTCTAATTAG AAGTTTGAAT TTTCTCGAAA 12091 .......... .......... .......... .......... .......... .......... 703 TTCATTAAAA ATGACAAATG AAAACTTGAA TACGCTTTAT ATGGATGAAT CAGACCCAAT 12151 .......... .......... .......... .......... .......... .......... 703 GCCCAACGTT GTAGTGAGAT GCAAACACGA AATTTTTGTT GAATTTGCAA ACTTCTTGGT 12211 .......... .......... .......... .......... .......... .......... 703 CGAAATTAAA TCCGGAAAGA AGATTTGGTG ATATCACTTG ATAATGCAGA ATCGTCTGAT 12271 .......... .......... .......... .......... .......... .......... 703 GTAAATGCTC TTACTTTTGA TGATGCAGAA TCGTTTAATG ATAACCAAAA GTGGAGTAGG 12331 .......... .......... .......... .......... .......... .......... 703 AGATGAAAAG AGGGTTTTTG AAATTTTCTT GCTTCCTTTG TTCTTCTTTC AGTTTAGGGA 12391 ||| .......... .......... .......... .......... .......... .......GGA 706 GAAATGGGGG GGGGGGGGGG GTAGCAAGAA AATGGAGAAA AAAA 12435 || |||| ||||| | ||| ||||| || | ||| AAAGGGGGGA AAAAGGGGGC CCAAGGGGAA AATGGGGACA CAAA 750 hqPGS_C08HBa0294K15.1+_SGN-U335075+ (3815 4075) ******************************************************************************** EST sequence 49 +strand 1778 n (File: SGN-U316028+) 1 GAGATTTGAG GTTGATGATG AAATTTCTTG TTTTAGCAGC TCTTCTTGCT GTTACTGCTT 61 TTGCAGCAGA AAATGAGGTT GTATGGACTT TGGACCATAC TAATTACTCT CAAATTATTT 121 CCCAGCACAA GATGATCGTT GTTCAGTTCT ATGCCCCATG GTGTGGATAC TGCCAGCAAC 181 TTGAGCCAAA GTACGAAGAA GCAGCTTCGG TATTGAGTAA TCATGATCCT CCAGTTATTC 241 TTGCTAAAAT GGATACAACA ATTCTAGAAA ATGCTGAACT TGCAAGAAAT TTCACCATTA 301 ATGGTGTTCC AAGCATTAAG ATCTTCCGTA ATGGTGGGAA GACGGTTCAT GATTACAAAG 361 GTACTCGTGA GACGGAAGGT ATAATTGCTT ATTTGAAAAA ACATGGGGGC CCTGCATCTC 421 TTGAAATCAA AACCGAGAAA GATGCTGCAA CCTTTATTGA TGAGAAAAAG ATTGTTGTTG 481 CTGGTATATT TCCACAACTC TCTTTAGAGA AGATCATCAA TTTTACTACT TTAGCTGAAG 541 ATTTACGAGT AGATTACGAT TTTGTTCACA CACTTGATGC CAAACTCCTT CCTCGTGGTG 601 GGCTGGTTGA TAAGCCAACT ATCCGTCTAT TGAAGCCATA TGATGAACTT TATGCTGATT 661 TCGAGGATTT TCAAATTGAG GCAATGCAGA ATTTCATTGA AGAAACTAGT GTCCCAATCA 721 TGGCTATTCT TGATGATAAT CCAGAAAACC AACAATTTGT TAATCACTTT TTGCATAGTC 781 CAGGAGACAA GGTATTTCTA TTTCTGAACT TCAGCACTGA TCTTGATGCT TTCAAGATTA 841 AGTACTATGA TCTTGCACTC AGTTACAAGG GAAAGGAAAC AAACTTCCTC TTGGGAGATG 901 CTGAGAGTGG TAAAAAGGCC CTTCAGTATT TTGGATTGGA CACTGATCAG ACACCTTTAA 961 TCTTCGTACT TACCATGGGT AGCACAAAAT ACGTTCAGCG ACATGTACAA CCCGATAACC 1021 TTGCATCTTG GTTGAAGGAT TGTAAGGACG GAAAGTTGAA GCCATACTTG AAGTCACAGC 1081 CAATTCCAGA ATTTAACAAT GAAACTGTGA AGGTGGTGGT TGCAGAGACT CTTGACGATA 1141 TGGTGTTTAA TTCGGGAAAA GATGTACTGT TGGAGTTCTA TCGACTTGGG TGTAGATATT 1201 GTGAGGAGTT TGCTCCCGTC TTGGATGAAA TAGCTATCTC ATTTGAAAAA GATCCTCATG 1261 TCGTGATTGC TAAAATTGAT GGAACGGAAA ATGATATACC TCGTGACGTA TTTGAAGTTG 1321 AAGGATTCCC AACTTTATAC TTGAGATCTT CAACGGGTAG TTTGTCACGG TTTGAGGGTA 1381 ATAGAACAAA AGAGGCCATT ATTGAATTTA TCCAGACAAA CAGAGGTAGC CCTGCCTTTG 1441 ATTTTAGCAT ATCACAAACT CAAACAGATC AAGTGAAGGA TGAGTTGTAA GAAGCAAGTG 1501 CACCATCAAC TTCGACCCGC CTTCAACTCT AGCCAGTCTC CAGCACATCA GATTTCAGGG 1561 TGAGCTATTA TTCCTAGCTC GGACTGGATT CTCTCCCTCA CGTCTTGATG TCTTGAAGTT 1621 CGGACATGGA CCGTTTTCTT TTTACTTATT TTAGCTTCTT AAATACTCTT AGATTTACTG 1681 AGGATAGATG TTATTGATGT GATGACTTCC AGATTTTGGG ATTAATAAAT ATTAAACTTT 1741 AGAAGTTTAT TTAATTGATT ACGTTAATAA AAAAAAAA Predicted gene structure (within gDNA segment 1 to 12461): Exon 1 3816 4103 ( 288 n); cDNA 1493 1777 ( 285 n); score: 0.778 MATCH C08HBa0294K15.1+ SGN-U316028+ 0.778 288 0.162 C PGS_C08HBa0294K15.1+_SGN-U316028+ (3816 4103) Alignment (genomic DNA sequence = upper lines): AGCAAACGTG CCA-CAACTT CGACTCAACC GCAACTCTAG CCAGACTTCA GCATAATCAG 3874 ||||| | ||| |||||| |||| | | ||||||||| |||| || || ||| ||||| AGCAAGTGCA CCATCAACTT CGACCCGCCT TCAACTCTAG CCAGTCTCCA GCA-CATCAG 1551 ATTTCA-GGT GAGCTATTGT TCCTAGCTCG GACTGGATTC TTTCTTTCAG GTCTTGATGT 3933 |||||| ||| |||||||| | |||||||||| |||||||||| | || ||| |||||||||| ATTTCAGGGT GAGCTATTAT TCCTAGCTCG GACTGGATTC TCTCCCTCAC GTCTTGATGT 1611 CTTGAAGTTC GGACATGGAC C-ATCTC-TT TTATTTATTT TAGCTTCTTA GATACTCTTA 3991 |||||||||| |||||||||| | | || || ||| |||||| |||||||||| ||||||||| CTTGAAGTTC GGACATGGAC CGTTTTCTTT TTACTTATTT TAGCTTCTTA AATACTCTTA 1671 GATTTAGTAA TTTGAGGATA GATGTTCTTG TGATGATGAC TTCCAGATTT TGGGGATAAT 4051 || || | | |||||||| |||||| ||| ||||||| |||||||||| | ||||| | GA-TT--T-A -CTGAGGATA GATGTTATTG ATGTGATGAC TTCCAGATTT T-GGGAT--T 1723 GATAAGTTTT GAGTTTTAGA AG-TTAATT- ATTGATTTCG TTAATGAGTT TTAA 4103 |||| | || | |||||| || ||| || ||||||| || ||||| | || AATAAATATT AAACTTTAGA AGTTTATTTA ATTGATTACG TTAATAAAAA AAAA 1777 hqPGS_C08HBa0294K15.1+_SGN-U316028+ (3816 4103) ******************************************************************************** EST sequence 93 -strand 1437 n (File: SGN-U317064-) 1 AGCCCATCTG ATACTAGGGC AGTGACTCTT CCACTGACTG AGGAAGTAAT AGAGAAAGGG 61 AGGGATGGGG AAACTGAACA AGTGCAAAAT GAGGAAATGC CACCCCAACC TACCCCAGAG 121 ATGATCAATC AGGTTCTGGC TTATCTTAGC GGGTTATCTG ATCAAGGTCA AGCACCTCCA 181 GTGTTTTCTG CGCCAACACC TCCGGTTTCA GAAGTACAAC ATGCGGCTAC TATGGCTCCC 241 CGCATGGATG TTCCATTGGA CATAGGCACA TTTCCACGTT TGACTACTGT CCCTATAATG 301 ACAAATGATC AGCATGAACT TTTCAGTAAG TTCTTGAAAT TGAAACCTCC GGTCTTCAAG 361 GGTGCTGAAT CGGAGGATGC TTATGATTTT CTGGTTGACT GTCACGAGCT ACTACACAAG 421 ATGGGTATAG TAGAACGGTT TGGTGTGGAG TTTGTGACTT ATCAGTTTCA AGGGAACGCC 481 CAAATGTGGT GGCGGTCACA TATCGAGTGT CAACCAATAG AGGCATCACC TATGACTTGG 541 GCCTCATTCT ATAGTTTGTT TATGGAGAAG TATATCCCCC GGACTTTGAG GGATAAGAAA 601 AGGGATGAGT TCTTGAGCCT AGAGCAAGGT AGGGTGTCAG TTAATGCTTA TGAGGCTAAG 661 TTTCGTGCAC TATCCAGATA TGCCACTCAA CTCTGTTTCA GTCCTCAAGA GCGGATTCGC 721 CGGTTTGTGA AGGGGTTGAG GTCAGAATTG CGGATTTCGT CCTTACAGGT AGCGGCAACG 781 GCAAAATCCT TCCAAGAAGT GGTAGACTTT GTGATAGAAG TGGAAGGAGT GAAGCCAGAC 841 GACTTCACCA CGACATCGAC ATCAAAGAGG TTTCGAAAGG GAGGTGAGTT TAAGGGTTCT 901 TACTCTAGAG GACAAGGTTC CGGAGGTTAC TCAGCTCGAC CCATTCAGTC TTCACTACAG 961 ACTGTAGTTG GGGGTCCACC TCAGACCGGT CAACACTTCT CCAAGGGGCC TATGAGTGAC 1021 TCCAGAGAAT GTTATGGATG TGGGGAGATT GGACATATTA GGATAAATTG TCCCGGACCA 1081 AGTTATAGAC CCCCAATAGC TAGAGGTAGA GGTGGTCATG GTAGAGGCCG TTATTCTGGA 1141 GGACGTGGTG GTCGAGGTAA TGGTGGTCAC CAAAACGGCA GAGGTAATGG GCAAACTGGG 1201 GCCACTACAT CACAACATGG TAGGGGCAAT GGGCAGACAA ACGATAGGGC CCATTGTTAC 1261 GCTTTCCCTG GGCGGTCTGA AGCGGAGGCA TCTGATGCTG TCATCACAGG TAATCTTCTA 1321 GTTTGTGATT GCATGGCTTC CGTATTGTTT GATCCTGGAT CCACGTTTTC TTATGTATCT 1381 TCCTCATTTG CTAATGGTCT AAATTTACAT TGTGAATTTC TTGATATGCC TATTCGT Predicted gene structure (within gDNA segment 2695 to 7015): Exon 1 4558 5550 ( 993 n); cDNA 12 1004 ( 993 n); score: 0.853 Intron 1 5551 5586 ( 36 n); Pd: 0.000 (s: 0.86), Pa: 0.000 (s: 0.80) Exon 2 5587 6019 ( 433 n); cDNA 1005 1437 ( 433 n); score: 0.861 MATCH C08HBa0294K15.1+ SGN-U317064- 0.856 1426 0.992 C PGS_C08HBa0294K15.1+_SGN-U317064- (4558 5550,5587 6019) Alignment (genomic DNA sequence = upper lines): TACTAGGGCG GTGACTCCTC CACCGACTGA GGAAGTATTA -AGAGAGGGT GAGGAAGGGG 4616 ||||||||| ||||||| || ||| |||||| ||||||| || ||| |||| | ||| |||| TACTAGGGCA GTGACTCTTC CACTGACTGA GGAAGTAATA GAGAAAGGGA G-GGATGGGG 70 GAAATGAACA AGTGCAGAAC GAGGAATTAC CACCCCAACC TACCCTAGAG ATGATTAATC 4676 || |||||| |||||| || |||||| | | |||||||||| ||||| |||| ||||| |||| AAACTGAACA AGTGCAAAAT GAGGAAATGC CACCCCAACC TACCCCAGAG ATGATCAATC 130 AGGTTCTTGC TTATCTTAGC GGGTTATCTG ATCAAGGCCA GACACCTCCA GTGTTTTCTG 4736 ||||||| || |||||||||| |||||||||| ||||||| || |||||||| |||||||||| AGGTTCTGGC TTATCTTAGC GGGTTATCTG ATCAAGGTCA AGCACCTCCA GTGTTTTCTG 190 CACCAGTACC TCAGGTTCCG GGAGTACAAC ATACAGCTGC TGTGGCTCCC CGCATGGATG 4796 | ||| ||| || |||| | | |||||||| || | ||| | | |||||||| |||||||||| CGCCAACACC TCCGGTTTCA GAAGTACAAC ATGCGGCTAC TATGGCTCCC CGCATGGATG 250 CCTCATTGGA AATAGGCACG TTTCCTCGGT TGACTACAGG GCCTATAATG ACAAGTGACC 4856 ||||||| |||||||| ||||| || | ||||||| | ||||||||| |||| ||| | TTCCATTGGA CATAGGCACA TTTCCACGTT TGACTACTGT CCCTATAATG ACAAATGATC 310 AGCACGAACT TTTCAGTAAG TTCTTGAAGT TGAAACCTCC AGTTTTCAAG GGTGCTGAAT 4916 |||| ||||| |||||||||| |||||||| | |||||||||| || |||||| |||||||||| AGCATGAACT TTTCAGTAAG TTCTTGAAAT TGAAACCTCC GGTCTTCAAG GGTGCTGAAT 370 CTGAGGATGC CTATGACTTT CTGGTTGATT GTCATGAGTT GCTACATAAG ATGCGCATAG 4976 | |||||||| ||||| ||| |||||||| | |||| ||| | ||||| ||| ||| | |||| CGGAGGATGC TTATGATTTT CTGGTTGACT GTCACGAGCT ACTACACAAG ATGGGTATAG 430 TGGAACGATT TGGCGTTGAG TTTGTGACCT ATCAGTTTTA GGGGAACGCC AAAATGTGGT 5036 | ||||| || ||| || ||| |||||||| | |||||||| | ||||||||| ||||||||| TAGAACGGTT TGGTGTGGAG TTTGTGACTT ATCAGTTTCA AGGGAACGCC CAAATGTGGT 490 GGCGGTCATA TGTTGAGTGT CAACCAGCAC AGTCACCACC TATGACTTGG GCATCATTCT 5096 |||||||| | | | |||||| |||||| | || || |||| |||||||||| || ||||||| GGCGGTCACA TATCGAGTGT CAACCAATAG AGGCATCACC TATGACTTGG GCCTCATTCT 550 CTAGCTTGTT TATGGAGAAT TATATACCTC GGACTTTGAG GGATAGGAGG AGAGATAAGT 5156 ||| ||||| ||||||||| ||||| || | |||||||||| ||||| || || ||| ||| ATAGTTTGTT TATGGAGAAG TATATCCCCC GGACTTTGAG GGATAAGAAA AGGGATGAGT 610 TCCTGAGCTT AGAGCAAGGC AGGATGTCGG TTACTGCTTA TGAGGCTAAG TTTTGTGCAC 5216 || ||||| | ||||||||| ||| |||| | ||| |||||| |||||||||| ||| |||||| TCTTGAGCCT AGAGCAAGGT AGGGTGTCAG TTAATGCTTA TGAGGCTAAG TTTCGTGCAC 670 TATCCAGGTA TGCCACCCAG CTTTGCTTCA GTCCACAAGA GCGGATTCGT CGTTTCGTGA 5276 ||||||| || |||||| || || || |||| |||| ||||| ||||||||| || || |||| TATCCAGATA TGCCACTCAA CTCTGTTTCA GTCCTCAAGA GCGGATTCGC CGGTTTGTGA 730 AAGGGTTGAG GTCAGATTTG CGGATTTCAG CCTTACAGGT AGCTGCTGCA GCAAAATCCT 5336 | |||||||| |||||| ||| |||||||| |||||||||| ||| || | |||||||||| AGGGGTTGAG GTCAGAATTG CGGATTTCGT CCTTACAGGT AGCGGCAACG GCAAAATCCT 790 TTCAGGAGGT GGTAGATTTT GTAATAGAAG TGGAGGGAGT GAAGCCAGAC GACTTCACCA 5396 | || || || |||||| ||| || ||||||| |||| ||||| |||||||||| |||||||||| TCCAAGAAGT GGTAGACTTT GTGATAGAAG TGGAAGGAGT GAAGCCAGAC GACTTCACCA 850 TGGCATCAAT ATCTAAGAAG TTTCATAAAG GAGGTGATTT TAATGGTTTT TAATCCAGAG 5456 | |||| | ||| |||| | |||| || | ||||||| || ||| |||| | || || |||| CGACATCGAC ATCAAAGAGG TTTCGAAAGG GAGGTGAGTT TAAGGGTTCT TACTCTAGAG 910 GGCAGAGTTC AGGAGGTTAT CCAGCCCGAC CTATTCAGTC TTCACTACAA GCTGTAGCTG 5516 | || |||| |||||||| |||| |||| | |||||||| ||||||||| |||||| || GACAAGGTTC CGGAGGTTAC TCAGCTCGAC CCATTCAGTC TTCACTACAG ACTGTAGTTG 970 GGGGTCCACC GCAGACCGGT CAACATTTCT CTGAGTTTGG AGGTTATCCC CAGACTCTGT 5576 |||||||||| ||||||||| ||||| |||| | | GGGGTCCACC TCAGACCGGT CAACACTTCT CCAA...... .......... .......... 1004 CGTTCTCATA GAGACCTATG CTTTAATCAA GAGAGTGTTA TGGATGTGGA GAGACTGGAC 5636 | | |||||| | | || | |||| ||||| ||||||||| |||| ||||| .......... GGGGCCTATG AGTGACTCCA GAGAATGTTA TGGATGTGGG GAGATTGGAC 1054 ATATTAAGAG GTATTGTCCA AAACAGAGTT ACAGACCCCC AATAGTCAGA GGTAGAGGTG 5696 |||||| || ||||||| || |||| | |||||||| ||||| ||| |||||||||| ATATTAGGAT AAATTGTCCC GGACCAAGTT ATAGACCCCC AATAGCTAGA GGTAGAGGTG 1114 GTCATGGGAG AGGTCGCTAT TCTGGAGGAC GTGGTGGCCG AGGTAATGGT GGTCACCAAA 5756 ||||||| || ||| || ||| |||||||||| ||||||| || |||||||||| |||||||||| GTCATGGTAG AGGCCGTTAT TCTGGAGGAC GTGGTGGTCG AGGTAATGGT GGTCACCAAA 1174 ACGGCCGGGG TGACAGGCAA ACTGGAACTT CTGTAGCTCA ACATTGTAGG GGCAACGGGC 5816 ||||| | || | | ||||| ||||| | || | | || |||| ||||| ||||| |||| ACGGCAGAGG TAATGGGCAA ACTGGGGCCA CTACATCACA ACATGGTAGG GGCAATGGGC 1234 AGACCGGTGA TAGGGCCCAT TGTTATGCTT TCCCTGGGAG GTCTGAAGCG GAGACATCTG 5876 |||| || |||||||||| ||||| |||| |||||||| | |||||||||| ||| |||||| AGACAAACGA TAGGGCCCAT TGTTACGCTT TCCCTGGGCG GTCTGAAGCG GAGGCATCTG 1294 ATGCCGTCAT CACAGGTAAT CTTTTGGTTT GTGATTGCAT GGCTTCTGTA TTGTTTGATC 5936 |||| ||||| |||||||||| ||| | |||| |||||||||| |||||| ||| |||||||||| ATGCTGTCAT CACAGGTAAT CTTCTAGTTT GTGATTGCAT GGCTTCCGTA TTGTTTGATC 1354 CTGGATCCAC ATTTTCATAT GTATCTTCCT CATTTGCTAC TGGTCTTAAT TTACATTATG 5996 |||||||||| ||||| ||| |||||||||| ||||||||| |||||| ||| ||||||| || CTGGATCCAC GTTTTCTTAT GTATCTTCCT CATTTGCTAA TGGTCTAAAT TTACATTGTG 1414 AATTGCTTGA CATACCTATT CGT 6019 |||| ||||| || |||||| ||| AATTTCTTGA TATGCCTATT CGT 1437 hqPGS_C08HBa0294K15.1+_SGN-U317064- (4558 5550,5587 6019) ******************************************************************************** EST sequence 37 +strand 888 n (File: SGN-U315286+) 1 TAATGAACTA AATTCCCAAA TGAGTATGAT GAGGAGGTGT GAGTCCTCAT TGATGTGCTT 61 GGTGTTGTAA CCAAGGGTTA TGGTAACTAT AAATGCTGCA TGTTAAGGAT ATTAGTTGAT 121 TTTATGATAT TGCTTAATAC ATACTGTTCC CTATTTTGAG TTGGCCGATG ATATCTACTC 181 AGTAGCCGTG TTTTGTACTG ACCCCTACTT TTATGTTTTT CTTCTTGTTA TTTGTGGAGT 241 GCAGCAAACG TGCCGTCATC TTCGACTCAA CAGTAACTCA AGCCAGTCTT CGTCACACCG 301 GATCTTCAGG GTGAGCTAAC GCTTCTAGCT TGGACTGGAT CTTCTCCTTC ATGTCTTGAT 361 GCCTTGAACT TCCGGCATGG ACTAGCTTCT TATGTAATTT TTTAGCTTCT TAGAAACTCT 421 TAGAATTAGT AGTTTAAAGT AGATGTTCTT GTGATGATGA CTTCCAGGTT TTGGGAATAA 481 TAGATGTTTA ATAATAGTAG TTATTGATTT TATTAATGAG TTTAAGTCTT CCGCATTACT 541 TTCTGTTGCT ATTACATTGA AATGTTAAGG TTTAGATTGG TTGGTTCGCT CACATAGGAG 601 GGTAAGTGTG GGTGCCAGTG GCGGCCCGGA TTTGGGTCGT GACAAAACTT GGTATCAGAG 661 CATTAGGTTC GTTGGTCTCA TCACACAAGA ACAAGTCTAG TAGAGTCTTA AGGAACGGTA 721 GGGGGACGCT TTTACTTTTC CTTGAGAGGC TATAAGACTT TAGGAAAACT TCACTCTTTC 781 ATTCTTTCTT TCGTGCTACT ACTTCGAGTC AATTGGTATC TAAGCGATAC GAATTGGTAT 841 CTGACCATNC TCACTCTCTT GCCAGATGGG TAGAACTAGA GCAACGAC Predicted gene structure (within gDNA segment 1246 to 6684): Exon 1 3575 4457 ( 883 n); cDNA 1 885 ( 885 n); score: 0.805 MATCH C08HBa0294K15.1+ SGN-U315286+ 0.805 883 0.994 C PGS_C08HBa0294K15.1+_SGN-U315286+ (3575 4457) Alignment (genomic DNA sequence = upper lines): TAATGAACCT GTTTCCCAAA TGAGTATGGT GTGGAGGCTT GAGTCCTCAT AGATGTGCTT 3634 |||||||| |||||||| |||||||| | | ||||| | |||||||||| ||||||||| TAATGAACTA AATTCCCAAA TGAGTATGAT GAGGAGGTGT GAGTCCTCAT TGATGTGCTT 60 GG-GTTGTGC CCAATGGTTA TGGTACTTGT TGTTGTCACC TGTTTAGTAT TGTAGTTGAT 3693 || ||||| |||| ||||| ||||| | | || | |||| || || |||||||| GGTGTTGTAA CCAAGGGTTA TGGTAACTAT AAATGCTGCA TGTTAAGGAT ATTAGTTGAT 120 TTTATGTTAT TATCTGATAT ATATTGCTTT CTATTTTGAG TTGGCCGATG ATACCTACTC 3753 |||||| ||| | | ||| ||| || | |||||||||| |||||||||| ||| |||||| TTTATGATAT TGCTTAATAC ATACTGTTCC CTATTTTGAG TTGGCCGATG ATATCTACTC 180 AGTACTTGTG CCTTGTACTG ACCCCTACTT GTATGTTTCT TTCTTTGTTA TTTGTGGAGT 3813 |||| ||| |||||||| |||||||||| ||||||| | | |||||| |||||||||| AGTAGCCGTG TTTTGTACTG ACCCCTACTT TTATGTTTTT CTTCTTGTTA TTTGTGGAGT 240 GCAGCAAACG TGCC-ACAAC TTCGACTCAA CCGCAACTCT AGCCAGACTT CAGCATAATC 3872 |||||||||| |||| || | |||||||||| | | ||||| |||||| ||| | || | | GCAGCAAACG TGCCGTCATC TTCGACTCAA CAGTAACTCA AGCCAGTCTT CGTCA-CACC 299 AGAT-TTCA- GGTGAGCTAT TGTTCCTAGC TCGGACTGGA TTCTTTCTTT CAGGTCTTGA 3930 ||| |||| ||||||||| | | ||||| | |||||||| | | || || || ||||||| GGATCTTCAG GGTGAGCTAA CGCTTCTAGC TTGGACTGGA TCTTCTCCTT CATGTCTTGA 359 TGTCTTGAAG TTCGGACATG GACCATC-TC TTTTAT-TTA TTTTAGCTTC TTAGATACTC 3988 || |||||| ||| | |||| ||| | | || || | | | |||||||||| ||||| |||| TGCCTTGAAC TTCCGGCATG GACTAGCTTC TTATGTAATT TTTTAGCTTC TTAGAAACTC 419 TTAGATTTAG TAATTTGAGG ATAGATGTTC TTGTGATGAT GACTTCCAGA TTTTGGGGAT 4048 ||||| |||| || ||| | | ||||||||| |||||||||| ||||||||| ||||||| || TTAGAATTAG TAGTTTAAAG -TAGATGTTC TTGTGATGAT GACTTCCAGG TTTTGGGAAT 478 AATGATAAGT TTTGAGTTTT AGAAGTTAAT TATTGATTTC GTTAATGAGT TTTAAGTTTT 4108 ||| | | | ||| | | | || || | ||||||||| |||||||| ||||||| || AAT-AGATG- TTT-A---AT AATAG-TAGT TATTGATTTT ATTAATGAG- TTTAAGTCTT 530 CCGTATTATA TTCTGTT--T ATTATGGTTG AAATGTTGGG GTTTAGATTG GTTGGTTCGC 4166 ||| |||| ||||||| | |||| ||| ||||||| | |||||||||| |||||||||| CCGCATTACT TTCTGTTGCT ATTA-CATTG AAATGTTAAG GTTTAGATTG GTTGGTTCGC 589 TCACATAGGA GGGTAAGTGT GGGTGCCACT CACGGCTC-G TTTTGGGTCG TGAC-AAACT 4224 |||||||||| |||||||||| |||||||| | |||| | | ||||||||| |||| ||||| TCACATAGGA GGGTAAGTGT GGGTGCCAGT GGCGGCCCGG ATTTGGGTCG TGACAAAACT 649 TGGTATCAGA GCATTAGGTT CGTTGGTCTC ATCACACAAG AACAAGTCTA GTAGAGTCTT 4284 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTATCAGA GCATTAGGTT CGTTGGTCTC ATCACACAAG AACAAGTCTA GTAGAGTCTT 709 GAGGAATGGT AGGGGGACGC CTTTACTTTT CTTTGAGAGG CTATAAGACT TAAGGAAAA- 4343 ||||| ||| |||||||||| ||||||||| | |||||||| |||||||||| | ||||||| AAGGAACGGT AGGGGGACGC TTTTACTTTT CCTTGAGAGG CTATAAGACT TTAGGAAAAC 769 TT--C-CATT CTTTCTTTCT TTCGTGCTAT TACTTGGATC CAATTGGTAT CTAGGTGATA 4400 || | | || | |||||||| ||||||||| ||||| || |||||||||| ||| | |||| TTCACTCTTT CATTCTTTCT TTCGTGCTAC TACTTCGAGT CAATTGGTAT CTAAGCGATA 829 CAAATTGGTA TCTGACCATC TTCACTCTAT TTCGCAGATG GTTAGAACTA GAGCAAC 4457 | |||||||| ||||||||| ||||||| | | | |||||| | |||||||| ||||||| CGAATTGGTA TCTGACCATN CTCACTCTCT TGC-CAGATG GGTAGAACTA GAGCAAC 885 hqPGS_C08HBa0294K15.1+_SGN-U315286+ (3575 4457) ******************************************************************************** EST sequence 27 +strand 1101 n (File: SGN-U315280+) 1 CCCAAACCAA CCAGCAGCTC ATCACAAACA AACTCCGTCA TTGTCTCTCC GTTTCCCTCC 61 AAACAACAAC CAAATAACAA CCAAACAGCC ACCAGAATAC AACCCAATCC AGCCAAACAC 121 ACTCCGAAAT CATCAGGAAA ATAGAACTAA AAACCCACCA GATCTCCTCT TAAATCACCA 181 CCTCTGCTCA CCCTTTAAGC TTTACTCGAG TTATTCCATT AATGGTGAAC TCCGAGCTCC 241 CATCGTCCCA TTTTCCCCTC TCACCCGCTA CAAACAATGG CAACCCTCAA TTCCATGCGA 301 ATCAGAACCA CCACCATTTC CGACGAACGG AGAAACGACN ACAACCACCT CTAAAACCCA 361 ATGTTTTCGT ATTCGATGCA ACCAGTAGCT CCGGCGAGGA GCTCAAAGCT CCGATGTACC 421 GGAGCTAAAT AACACTAGAC CTCTTTCCCT CTTCCCCTTA ACGTTTTTTT GACAGGTGAA 481 CTACAATCAG CGAGTTTGTG AACAAACAAC GGCNACAACT AGAAGTTCTA AGGATCAACG 541 ACNACCAGCT ACAAGCTCCA GCGAAGAATA AAAATGACCA CATCCAGTCC TAATACTCCN 601 TTGAAGTGAG ATTTCACCGG AAAGATTAGA CTTCGGCCAA ACATCATTTA AAATGGCAAA 661 CGTACCGTCG TCTTCAACTC AACCGCAACT CTAGCCAGTC TTCATTACAT CGGATTTCAG 721 GGTGAGCTAA CGCTTCTAGC TTGGACTGGA TCTTCTTCTT CATGTCTTGA TGCCTTGAAG 781 TTCCGGCATG GACTAGCTGT TTATGTATTT TAGCTTCTTA GATACTCTTA GATTTAGTAA 841 TTTGAAGTAG ATGTTCTTGT GATGATGACT TCCAGATTTT GGGGATAATA ATAGTTGTTG 901 AGTTTTTAGA AAAAAAAAAT TGATTTTCAT TAATGAGTTT AAGTCTTCCG CATTATATTC 961 CGTCATTATA TTGAAATGTT GGATTTTGTA TTGGTTGGTT CGCTCACATA GGAGGGTAAG 1021 TGTGGGTGCC ACTTGCGGCT CGATTTGGGT CGTGACATTA AAGATTATCG AATTCATAAT 1081 ATAATTGTAA GAAAAAAAAA A Predicted gene structure (within gDNA segment 2227 to 12396): Exon 1 3818 4263 ( 446 n); cDNA 657 1101 ( 445 n); score: 0.786 MATCH C08HBa0294K15.1+ SGN-U315280+ 0.786 446 0.405 C PGS_C08HBa0294K15.1+_SGN-U315280+ (3818 4263) Alignment (genomic DNA sequence = upper lines): CAAACGTGCC -ACAACTTCG ACTCAACCGC AACTCTAGCC AGACTTCAGC ATAATCAGAT 3876 ||||||| || | |||| |||||||||| |||||||||| || ||||| | ||| ||| CAAACGTACC GTCGTCTTCA ACTCAACCGC AACTCTAGCC AGTCTTCATT A-CATCGGAT 715 TTCA-GGTGA GCTATTGTTC CTAGCTCGGA CTGGATTCTT TCTTTCAGGT CTTGATGTCT 3935 |||| ||||| |||| | | |||||| ||| |||||| | | |||| || ||||||| || TTCAGGGTGA GCTAACGCTT CTAGCTTGGA CTGGATCTTC TTCTTCATGT CTTGATGCCT 775 TGAAGTTCGG ACATGGACCA TCTCTTTTAT TTATTTTAGC TTCTTAGATA CTCTTAGATT 3995 |||||||| | ||||||| | || ||||| ||||||||| |||||||||| |||||||||| TGAAGTTCCG GCATGGACTA GCT-GTTTAT GTATTTTAGC TTCTTAGATA CTCTTAGATT 834 TAGTAATTTG AGGATAGATG TTCTTGTGAT GATGACTTCC AGATTTTGGG GATAATGATA 4055 |||||||||| | | |||||| |||||||||| |||||||||| |||||||||| |||||| ||| TAGTAATTTG AAG-TAGATG TTCTTGTGAT GATGACTTCC AGATTTTGGG GATAATAATA 893 AGTTTTGAG- TTTTAGAAGT TAATTATTGA -TTTCGTTAA TGAGTTTTAA GTTTTCCGTA 4113 | ||||| |||||||| || ||||| |||| |||| |||| ||||| || ||||| | GTTGTTGAGT TTTTAGAAAA AAAAAATTGA TTTTCATTAA TGAG-TTTAA GTCTTCCGCA 952 TTATATTCTG TTTATTATGG TTGAAATGTT GGGGTTTAGA TTGGTTGGTT CGCTCACATA 4173 |||||||| | | ||||| |||||||||| || ||| | |||||||||| |||||||||| TTATATTCCG -TCATTAT-A TTGAAATGTT GGATTTTGTA TTGGTTGGTT CGCTCACATA 1010 GGAGGGTAAG TGTGGGTGCC ACTCACGGCT CGTTTTGGGT CGTGACA-AA CTTGGTATCA 4232 |||||||||| |||||||||| ||| ||||| || ||||||| ||||||| | |||| GGAGGGTAAG TGTGGGTGCC ACTTGCGGCT CGATTTGGGT CGTGACATTA AAGATTATCG 1070 GAGCATTAGG TTCGTTGGTC TCATCACACA A 4263 | || | ||| | | | | | AATTCATAAT ATAATTGTAA GAAAAAAAAA A 1101 hqPGS_C08HBa0294K15.1+_SGN-U315280+ (3818 4263) ******************************************************************************** EST sequence 13 +strand 897 n (File: SGN-U335073+) 1 ATAGCTGGAG CTCCCCGCGG TGGCGGCCGC TCTAGAACTA GTGGATCCCC CGGGCTGCAG 61 GAATTCGGCA CGAGGATTAG GTTCGTTGGT CTCATCACAC AAGAACAGGT CTAGTAGAGT 121 CTTTAGGAAC GGTAGGGGGA CGCCTTTACT TTTCTTTGAG AGGCTATAAG ACTTTAGGAA 181 AATTTCACCC TTTCATTCTT TCTTTCGTGC TACTACTTGA GTCCAATTGG TATCTAGGCG 241 ATACAAATTG GTATCTGACC ATCTTCACTC TCTTTTGCAG ATGGTTAGAA CTAGAGCAAC 301 GACCACGTCA ACACCAACAC CGGCCAGACA AGAAACAACT GAGCCAGCCA CTGGGGCTGT 361 GGCTCGAGGG GGGGCCCGGT ACCCAATTCG CCCTATAGTG AGTCGTATTA CAATTCACTG 421 GCCGTCGTTT TACAACGTCG TGACTGGGAA AACCCTGGCG TTACCCAACT TAATCGCCTT 481 GCAGCACATC CCCCTTTCGC CAGCTGGCGT AATAGCGAAG AGGCCCGCAC CGATCGCCCT 541 TCCCAACAGT TGCGCAGCCT GAATGGCGAA TGGCAAATTG TAAGCGTTAA TATTTTGTTA 601 AAATTCGCGT TAAATTTTTG TTAAATCAGC TCATTTTTTA ACCAATAGGC CGAAATCGGC 661 AAAATCCCTT ATAAATCAAA AGAATAGACC GAGATAGGGT TGAGTGTTGT TCCAGTTTGG 721 GAACAGAGTC CACTATTAAA GAACGTGGAC TCCAACGTCA AAGGGCGAAA ACCGTCTATC 781 AAGGCGATGG CCCACTACGT GAACCATCAC CCCTATCAGT TTTTTGGGGT CGAGGTGGCG 841 TAAAGCACTA AATCGGAACC CCTAAGGGAG CCNNCCGATT AAAGCTTGAC GGGGAAA Predicted gene structure (within gDNA segment 2887 to 11037): Exon 1 4234 4532 ( 299 n); cDNA 73 375 ( 303 n); score: 0.863 MATCH C08HBa0294K15.1+ SGN-U335073+ 0.863 299 0.333 C PGS_C08HBa0294K15.1+_SGN-U335073+ (4234 4532) Alignment (genomic DNA sequence = upper lines): AGCATTAGGT TCGTTGGTCT CATCACACAA GAACAAGTCT AGTAGAGTCT TGAGGAATGG 4293 || ||||||| |||||||||| |||||||||| ||||| |||| |||||||||| | ||||| || AGGATTAGGT TCGTTGGTCT CATCACACAA GAACAGGTCT AGTAGAGTCT TTAGGAACGG 132 TAGGGGGACG CCTTTACTTT TCTTTGAGAG GCTATAAGAC TTAAGGAAAA -TT---CCAT 4349 |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| || || | TAGGGGGACG CCTTTACTTT TCTTTGAGAG GCTATAAGAC TTTAGGAAAA TTTCACCCTT 192 TCTTTCTTTC TTTCGTGCTA TTACTTGGAT CCAATTGGTA TCTAGGTGAT ACAAATTGGT 4409 || ||||||| |||||||||| |||||| | |||||||||| |||||| ||| |||||||||| TCATTCTTTC TTTCGTGCTA CTACTTGAGT CCAATTGGTA TCTAGGCGAT ACAAATTGGT 252 ATCTGACCAT CTTCACTCTA TTTCGCAGAT GGTTAGAACT AGAGCAACAG CTGCGCCGAC 4469 |||||||||| ||||||||| ||| |||||| |||||||||| |||||||| | || | || ATCTGACCAT CTTCACTCTC TTTTGCAGAT GGTTAGAACT AGAGCAACGA CCACGTCAAC 312 ACCAACACCG GCAAAACAAG ATGCGTCTGA ACCAGCCACT GAGGCTGTAG CTCGAAGAGG 4529 |||||||||| || | ||||| | | |||| ||||||||| | |||||| | ||||| | || ACCAACACCG GCCAGACAAG AAACAACTGA GCCAGCCACT GGGGCTGTGG CTCGAGGGGG 372 AGC 4532 || GGC 375 hqPGS_C08HBa0294K15.1+_SGN-U335073+ (4234 4532) ******************************************************************************** EST sequence 82 -strand 891 n (File: SGN-U335938-) 1 GCAAATGTTA GTGGCACTCA CATGGTGGGG GTCACCACGG AGGCACCACT ATGACCTGGG 61 GCNTCATCTC TAGCTGTTTA TGAGGAAGTA TATCCCCCGG ACTTTGAGGN ATAGGAAAAG 121 GGATGAGTTC TTGANCCTAT AGCAAGGTAG GATGTAGGTC AATGCATATG AGGCTAAGTT 181 TCGTGCACTA TCCAGATATG CCACTCAACT TTGTTTCAGT CCACAAGAGA GGATTCGTCG 241 TTTTGTGAAA GGGTTGAGGT CAGAGTTGCG GATTTCAGCG TTACAGGTAG CGGCTACGGC 301 AAAATCCTTG CAAGAAATGG TTGACTTCGA TGTAATTCTG GGTATGACTT GGCTTTCTCC 361 AAATTTTGCA ATCTTGGATT GTAATGCTAA AACCGTGACG TTAGCCAAGC CTGGGACAGA 421 TCTGTTAGTG TAGGAGGGTG ACTACACTTC CAATCCGGTG CGTATCATCT CCTTTCTTCG 481 TGCTAAGAAA ATGGTTAGTA AAGGGTGTTT AGCTTTCTTG GCACATCTCA AGGATAACAC 541 TACCCAAGTA CCTTCGATTG ACTCAGTTTC AGTAGTTCGT GAGTTTATGG ATGTGTTCCC 601 TGCAGATCAT CCTGGTATGC CACCGGATAG GGATATTGAC TTCTGTATTG ATCTCGAACC 661 GGGCACACGC CCCATTTTTA TACCCCCTTA TAGAATGGCT CCCGCAGAGT TAAGAGAGTT 721 AAAGGCACAA CTTCAAGAGT TATTGAACAA AGGCTTCATT AGACCAAGTG CATCTCCTTG 781 GGGTGCTCCG GTTTTGTTGT AAAGATCGGC AGTTTTTGAA TGTGCATAGA CTACAGCCTG 841 CAGCCCGGGG GATCCACTAT TCTAGAGCGG CCGCCACCGC GGTGAGCTCC A Predicted gene structure (within gDNA segment 2391 to 10926): Exon 1 5026 5340 ( 315 n); cDNA 2 312 ( 311 n); score: 0.827 Intron 1 5341 6120 ( 780 n); Pd: 0.000 (s: 0.88), Pa: 0.000 (s: 0.98) Exon 2 6121 6614 ( 494 n); cDNA 313 805 ( 493 n); score: 0.883 MATCH C08HBa0294K15.1+ SGN-U335938- 0.861 809 0.908 C PGS_C08HBa0294K15.1+_SGN-U335938- (5026 5340,6121 6614) Alignment (genomic DNA sequence = upper lines): CAAAATGTGG TGGCGGTCAT ATGTTGAGTG TCAACCAGCA CAGTCACCAC CTATGACTTG 5085 |||| | | |||| ||| ||| || | | || |||| | || ||||| ||||||| || CAAATGTTAG TGGCACTCAC ATGGTGGGGG TC-ACCA-CG GAGGCACCA- CTATGACCTG 58 GG-CATCATT CTCTAGCTTG TTTATGGAGA ATTATATACC TCGGACTTTG AGGGATAGGA 5144 || | ||| | |||||||| | |||||| || | ||||| || ||||||||| ||| |||||| GGGCNTCA-T CTCTAGCT-G TTTATGAGGA AGTATATCCC CCGGACTTTG AGGNATAGGA 116 GGAGAGATAA GTTCCTGAGC TTAGAGCAAG GCAGGATGTC GGTTACTGCT TATGAGGCTA 5204 || ||| | |||| ||| | || |||||| | ||||||| ||| | ||| |||||||||| AAAGGGATGA GTTCTTGANC CTATAGCAAG GTAGGATGTA GGTCAATGCA TATGAGGCTA 176 AGTTTTGTGC ACTATCCAGG TATGCCACCC AGCTTTGCTT CAGTCCACAA GAGCGGATTC 5264 ||||| |||| ||||||||| |||||||| | | ||||| || |||||||||| ||| |||||| AGTTTCGTGC ACTATCCAGA TATGCCACTC AACTTTGTTT CAGTCCACAA GAGAGGATTC 236 GTCGTTTCGT GAAAGGGTTG AGGTCAGATT TGCGGATTTC AGCCTTACAG GTAGCTGCTG 5324 ||||||| || |||||||||| |||||||| | |||||||||| ||| |||||| ||||| ||| GTCGTTTTGT GAAAGGGTTG AGGTCAGAGT TGCGGATTTC AGCGTTACAG GTAGCGGCTA 296 CAGCAAAATC CTTTCAGGAG GTGGTAGATT TTGTAATAGA AGTGGAGGGA GTGAAGCCAG 5384 | |||||||| ||| || CGGCAAAATC CTTGCA.... .......... .......... .......... .......... 312 ACGACTTCAC CATGGCATCA ATATCTAAGA AGTTTCATAA AGGAGGTGAT TTTAATGGTT 5444 .......... .......... .......... .......... .......... .......... 312 TTTAATCCAG AGGGCAGAGT TCAGGAGGTT ATCCAGCCCG ACCTATTCAG TCTTCACTAC 5504 .......... .......... .......... .......... .......... .......... 312 AAGCTGTAGC TGGGGGTCCA CCGCAGACCG GTCAACATTT CTCTGAGTTT GGAGGTTATC 5564 .......... .......... .......... .......... .......... .......... 312 CCCAGACTCT GTCGTTCTCA TAGAGACCTA TGCTTTAATC AAGAGAGTGT TATGGATGTG 5624 .......... .......... .......... .......... .......... .......... 312 GAGAGACTGG ACATATTAAG AGGTATTGTC CAAAACAGAG TTACAGACCC CCAATAGTCA 5684 .......... .......... .......... .......... .......... .......... 312 GAGGTAGAGG TGGTCATGGG AGAGGTCGCT ATTCTGGAGG ACGTGGTGGC CGAGGTAATG 5744 .......... .......... .......... .......... .......... .......... 312 GTGGTCACCA AAACGGCCGG GGTGACAGGC AAACTGGAAC TTCTGTAGCT CAACATTGTA 5804 .......... .......... .......... .......... .......... .......... 312 GGGGCAACGG GCAGACCGGT GATAGGGCCC ATTGTTATGC TTTCCCTGGG AGGTCTGAAG 5864 .......... .......... .......... .......... .......... .......... 312 CGGAGACATC TGATGCCGTC ATCACAGGTA ATCTTTTGGT TTGTGATTGC ATGGCTTCTG 5924 .......... .......... .......... .......... .......... .......... 312 TATTGTTTGA TCCTGGATCC ACATTTTCAT ATGTATCTTC CTCATTTGCT ACTGGTCTTA 5984 .......... .......... .......... .......... .......... .......... 312 ATTTACATTA TGAATTGCTT GACATACCTA TTCGTGTTTC TACTCCGGTG GGTGAGTCTG 6044 .......... .......... .......... .......... .......... .......... 312 TGATAGTTGA AAAAGTGTAT AGGTCTTGTC TTGTGACTTT TGTGGGGAAC AATACTCATG 6104 .......... .......... .......... .......... .......... .......... 312 TAGACTTGGT TATCTTAGAA ATGGTTGACT TCGATGTAAT TCTGGGTATG ACTTGGCTGT 6164 |||| |||||||||| |||||||||| |||||||||| |||||||| | .......... ......AGAA ATGGTTGACT TCGATGTAAT TCTGGGTATG ACTTGGCTTT 356 CTCCAAATTT TGCAATCTTA GATTGTAATG CTAAAACTGT AACGTCGGCC AAGCCTGGGA 6224 |||||||||| ||||||||| |||||||||| ||||||| || |||| ||| |||||||||| CTCCAAATTT TGCAATCTTG GATTGTAATG CTAAAACCGT GACGTTAGCC AAGCCTGGGA 416 CAGATCCGTT AGTGTGGGAG GGTGACTACA CTTCCACTCC ATTTCGTATT ATCTCCTTTC 6284 |||||| ||| ||||| |||| |||||||||| |||||| ||| | ||||| |||||||||| CAGATCTGTT AGTGTAGGAG GGTGACTACA CTTCCAATCC GGTGCGTATC ATCTCCTTTC 476 TTCGTGCTAA GAGAATGGTT AGTAAGGGTT GTTTAGCTTT CTTGACACAC CTCTAGGATG 6344 |||||||||| || ||||||| ||||| || | |||||||||| |||| |||| ||| ||||| TTCGTGCTAA GAAAATGGTT AGTAAAGGGT GTTTAGCTTT CTTGGCACAT CTCAAGGATA 536 ATACTACCCA AGTACCTTCA ATTGAGTCGA TTTCGATAGT CCGTGAGTTT CTAGATGTGT 6404 | |||||||| ||||||||| ||||| || |||| |||| ||||||||| | ||||||| ACACTACCCA AGTACCTTCG ATTGACTCAG TTTCAGTAGT TCGTGAGTTT ATGGATGTGT 596 TTCCTGCAGA CCTTCCTCGT ATGCCACCGA ATAGAGATAT TTATTTCTGT ATTGATCTGG 6464 | |||||||| | |||| || ||||||||| |||| ||||| | | |||||| |||||||| | TCCCTGCAGA TCATCCTGGT ATGCCACCGG ATAGGGATAT TGACTTCTGT ATTGATCTCG 656 AGCCGGGTAC TCGCCCCATT TCCATACCCC ATTATAGGAT GGCTCCCGCT GAGTTAAGAG 6524 | ||||| || ||||||||| | ||||||| |||||| || ||||||||| |||||||||| AACCGGGCAC ACGCCCCATT TTTATACCCC CTTATAGAAT GGCTCCCGCA GAGTTAAGAG 716 AGTTAAAGGC CCAACTTCAA GAGTTGTTAA GCAAAGGCTT TATTAGACCA AGTGCATCCC 6584 |||||||||| ||||||||| ||||| || | ||||||||| ||||||||| |||||||| | AGTTAAAGGC ACAACTTCAA GAGTTATTGA ACAAAGGCTT CATTAGACCA AGTGCATCTC 776 CTTGGGGTGC TCCTATTTTA TTTGTGAAGA 6614 |||||||||| ||| |||| |||| |||| CTTGGGGTGC TCCGGTTTT- GTTGTAAAGA 805 hqPGS_C08HBa0294K15.1+_SGN-U335938- (5026 5340,6121 6614) ******************************************************************************** EST sequence 75 -strand 900 n (File: SGN-U335932-) 1 TTGACGTGGA GTCCAGGTTC CTTATAGGTG ACTCTGTTTC CAACTGGAAC AACACTCAAC 61 CCTATCTCGG TCTATTCTTT GATTTATAAG GGATTTTGCC GATTTCGGCC TATGGTTAAA 121 AAATGAGCTG ATTTACAAAA ATTAACCGCG ATTTTAACAA AATATAACCG CTAACAATTG 181 CCATTCGCCA TTCAGGCTGC GCACTGTTGG GAAGGGCGAT CGTGCGGGGC CTCTTCGCTA 241 TTACGCCAGC TGGCGAAAGG GGGATGTGCT GCAAGGCGAT TAAGTTGGGT AACGNCAGGG 301 TTTTTCCCAG TCACGACGTT GTAAAACGAC GGCCAGTGAA TTGTAATACG ACTCACTATA 361 GGGCGAATTG GGTACCGGGC CCCCCCTCGA GGGAGAACAG CGGCAAGGGG CCGTGGTAGA 421 GGTCGTGGGA GGACGTCATC TAGAGGAAGA GAACGAGAAC CGAGCCCATC TGGTACTAGG 481 GCGGTGACTC CTCCACCGAC TGAGGAAGTA ATAAGAGAAG GGGAGGATGG GGAAACTGAA 541 CAAGTGCAAA ATGAGGAAAT GCCACCCCAA CCTACCCCAG AGATGATCAA TCAGGTTCTG 601 GCTTATCTTA GCGGTTTATC TGATCAAGGT CAAGCACCTC CAGTGTTTTC TGCGCCAACA 661 CCTCCGGTTT CAGAAGTACA ACATGCGGCT ACTATGGCTC CCCGCATGGA TGTTCCATTG 721 CACATAGGTA CATTTCCACG TTTGACTACT GGGCCTATAA TGACAAATGA TCAGCATGAA 781 CTTTTCAGTA AGTTCTTGAA ATTGAAACCT CCGGTCTTCA AGGGTCCTCG TGCCGAATTC 841 CTGCAGCCCG GGGGATCCAC TAGTTCTAGA GCGGCCGCCA CCGCGGGGAG CTCCAGCTTT Predicted gene structure (within gDNA segment 1 to 6484): Exon 1 6 23 ( 18 n); cDNA 439 456 ( 18 n); score: 0.833 Intron 1 24 3817 (3794 n); Pd: 0.000 (s: 0), Pa: 0.993 (s: 0) Exon 2 3818 3833 ( 16 n); cDNA 457 471 ( 15 n); score: 0.688 Intron 2 3834 4555 ( 722 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.96) Exon 3 4556 4909 ( 354 n); cDNA 472 825 ( 354 n); score: 0.876 MATCH C08HBa0294K15.1+ SGN-U335932- 0.876 388 0.431 C PGS_C08HBa0294K15.1+_SGN-U335932- (6 23,3818 3833,4556 4909) Alignment (genomic DNA sequence = upper lines): TCTAGAAGAA AAGTACGAAC ATTCTTGTAA TACTCCACAA GACTCTATTA TACTTATTTT 65 |||||| ||| || |||| TCTAGAGGAA GAGAACGA.. .......... .......... .......... .......... 456 GGTACAATGA AATTAACAAA ACTAGGGATC TAATATTAAT TTTATCACGA TCCAGACTAT 125 .......... .......... .......... .......... .......... .......... 456 AATGATTGAT ACCCTCACTA ACTCTCCAAT GTGAGAACCA TTACAACAAT CCAAACTAAC 185 .......... .......... .......... .......... .......... .......... 456 AATTTTATGA AAACTAAGAC ATTTAAAGAT ACAAAAGTAG GTTTGATGAC AATAAAAAAA 245 .......... .......... .......... .......... .......... .......... 456 TACAGAGTTC CCATAAACTC AAAAGATTTA AACAAATAAC TAACCAAACT AATGCGGAAA 305 .......... .......... .......... .......... .......... .......... 456 CAACCCCTAG AACCTGAATG TCATTGTACC AAAACTCTAC TAATGATAAG TATAAGAGCA 365 .......... .......... .......... .......... .......... .......... 456 AATGGTATGA CATTAAAACT AAACTACACC TTACATAAAT AGTATGAGTC TGAAAAGAGT 425 .......... .......... .......... .......... .......... .......... 456 GGACTTAAAC AAGAAGATCC ATGGCAGCCT GAAAGAACTG GATTACCCTT GAATCTGGTC 485 .......... .......... .......... .......... .......... .......... 456 ACGCTCAATA GTCTCCTAGT TAAGGTCTAT TAATGGCCGC CTGAAGATGT CATGTACTGA 545 .......... .......... .......... .......... .......... .......... 456 ACAAAGAACA AGCAAGTGGA GTATCATTAT ACAATCACAG TGTACAGATA GGATCACGCG 605 .......... .......... .......... .......... .......... .......... 456 ACTATTCCAG TAAGCACAAC ATATATCAAA ATTACAACAA TCTAAACACA TACATGCATA 665 .......... .......... .......... .......... .......... .......... 456 GAATATATAC GCACACAATG ATTTATCACT TACAAACAAG TATAATTTCA CAATTCTCAA 725 .......... .......... .......... .......... .......... .......... 456 GATATAAAGT CATGTCAAGT CGATGGTTCT CTCATAGAAC CCAATTCAAT GGTCCGCTCA 785 .......... .......... .......... .......... .......... .......... 456 TGCAACCCAT GCCCAAACTA ATAGCATACC AATACGTAGT ACCCAATTTA ATGTTTATGC 845 .......... .......... .......... .......... .......... .......... 456 TAGAATATAG CAATCGATCT AATATTTATG CCGAAATGTG GCAACCGATT TCATATTTAT 905 .......... .......... .......... .......... .......... .......... 456 GTCGAAATGT GACAACCGAT CAGAAATCAA CACCCGATCC ATTCAACAAA CCACAATCAC 965 .......... .......... .......... .......... .......... .......... 456 AATGTATACA ATCATAAAAT AAGAGGTTAT TCATGGAAAG TAGTTCTTAG TTCATATTTA 1025 .......... .......... .......... .......... .......... .......... 456 GTTACATTAG GTGTGATTAA TAGACTTCAT TCACATGCAT GCATTACAAT GAAGCAATCA 1085 .......... .......... .......... .......... .......... .......... 456 CTAACATACA TCATTCAAAA CATGATATCA CAGTCATCAC CTACCTCGAA TCCAAGCTTG 1145 .......... .......... .......... .......... .......... .......... 456 AATCCCTTAA GGCATTTGAA TCTTCCCTTT TTGAATTCTT TTCGCTTGTT CTAGGTCTAC 1205 .......... .......... .......... .......... .......... .......... 456 TAATGACAAT TTATAATAAT CAACAATCAA AGGTCTAATT ATCCAGATTA TAAAGAACTC 1265 .......... .......... .......... .......... .......... .......... 456 AATAATCCTA GACCAAATCC ATGATCCCAA TACCTAGATT GGGGATTTTT CCACCATAAT 1325 .......... .......... .......... .......... .......... .......... 456 TCTCATATCA AAACCCTCCC ACGTCAATAA TTACCCAAGG AACTAAGTTC TATGAATTGA 1385 .......... .......... .......... .......... .......... .......... 456 AACATGAATT CGGCGAATAA AAACCTTACC TTTAGCCTTA AGTATGGTGA AAAAACCTTC 1445 .......... .......... .......... .......... .......... .......... 456 AAGAACACAC TTGGGGTCGT TCCTTAGCTA TCAAAGTTCA GAAGTGTATA ATAAAACATT 1505 .......... .......... .......... .......... .......... .......... 456 TTTGAGGTTT TAAGTTGGGA GTTAAATAGT GTTTGTCCCG CTATGGCGAC CCCAACCCGC 1565 .......... .......... .......... .......... .......... .......... 456 CACAGCGGCT TCGCCCTAGC AGAAATAATC CAGCTACAAC GGCTTGCACA GAAACAGTGA 1625 .......... .......... .......... .......... .......... .......... 456 GCAAAATTAA TAATTCCAAA CCCCCATTTC ACAACACACC ATTATCCCAT GACACACAAA 1685 .......... .......... .......... .......... .......... .......... 456 AAATACACAT TCACGCTAAG ATCAATTCGG GAGTTCTACT CACCTAAATT CAATTAAGTA 1745 .......... .......... .......... .......... .......... .......... 456 AAAAGTCGTA CTAGATCCTT AAAATCTTGC CTATCCACTC ATGTAATCAA ATTCATTTAT 1805 .......... .......... .......... .......... .......... .......... 456 AGATCTCTCA TTTGTTATCA TATTTTCTGA TTTTGTCCAA ATCTAATACT AGAGTAGAAA 1865 .......... .......... .......... .......... .......... .......... 456 ATCTCAAGTT ACTACAAAAA AATTTTTGGC CCCAATTCTT TCCCCGTTGG CTTTTTCCTA 1925 .......... .......... .......... .......... .......... .......... 456 ACGACGGAAA TCAGGTCGCT ATAGATTCAC TATTTATAAT TATTGATTTA TTGATTTAGA 1985 .......... .......... .......... .......... .......... .......... 456 TCTTGATTTG ACTATTTTCT TATCGAGTGA ATGAATATAT ATAATAAACA TATATATATA 2045 .......... .......... .......... .......... .......... .......... 456 TATATATATA TATATATATA TAAAATTTTA GTTTATTATT GCAATTACCG TTTAAGAAAA 2105 .......... .......... .......... .......... .......... .......... 456 GGTTTGGTAA TGTCATTACT TCAACCACAT CATTATTATT TTTTTATAAT AAAAACAAAA 2165 .......... .......... .......... .......... .......... .......... 456 TTCTAAATAA AAATTGGATT AAAATAACTC ACCCAAGTAA AGACCCGCCC AAAATTCCTA 2225 .......... .......... .......... .......... .......... .......... 456 TAACCCATTA GTAATCCAAT ACTTTCATTC CCAATTTTGT TACGGGTGAT AATGTTGTTT 2285 .......... .......... .......... .......... .......... .......... 456 GTACTATTCA CAGATAGTAA TTATTGAAAA ATTCTTTTTG CGGTCGTAAA GCCACTACTG 2345 .......... .......... .......... .......... .......... .......... 456 AGGAATTGGA AGGGAGGGAT AAACAAGCTT TTGCAAAAAC ATTAGACGTG ATGAAGTTTA 2405 .......... .......... .......... .......... .......... .......... 456 GTTTTATTTA CGAAGCCCTA CTGTTTAAAA GTGATGATAT TATGCATTAG TTCACAAATA 2465 .......... .......... .......... .......... .......... .......... 456 TCAAATAGCA AATTCAAATT AGTTCACAAC TTTTGAAGTA ATGCCAGAAC ATTAAACTCA 2525 .......... .......... .......... .......... .......... .......... 456 TGTAACGACC TGTTAGTCGT TTTGAGCAGT AGAGTTTATT TCTGGTAATA ACTGTCTGGG 2585 .......... .......... .......... .......... .......... .......... 456 TTGACGGATC CCACGACGGA CCGTCATGGG CACGACGGAC CGTCGAGGGG GTCTCGTTCC 2645 .......... .......... .......... .......... .......... .......... 456 AAAATACTTA GTTTCTGAAA AATTGGGTAC TGAGAACAAC TCTCTGAACT TCGCAACGGA 2705 .......... .......... .......... .......... .......... .......... 456 AGAGCAGGAC GGACCGTCGT AGGCACGACG GACCGTCACA TGGTCTTAAA TAAAAATTGA 2765 .......... .......... .......... .......... .......... .......... 456 GTCTCTGAAC TCTGTAACGA CTTAGCAGGA CGGACTATCG CAGGCACGAC GGACCGTCAC 2825 .......... .......... .......... .......... .......... .......... 456 AGACTGAGTA ACCCTGACTG GGTCGGATTT CTGTTAAAAT TTTTTAAGGG GTGTTTTGGA 2885 .......... .......... .......... .......... .......... .......... 456 CTATTCCTGC TTATGATTAT AAGGTTAGTG GTTTAATGTT AATAATTCAA TTTCTTGGGG 2945 .......... .......... .......... .......... .......... .......... 456 GTTAAAGAAG ACAACCTTGG AATAAGTAAT GGGTTACTTT TAGCATCTTT TATACTTAAT 3005 .......... .......... .......... .......... .......... .......... 456 TATATGATAA ATAGGGTAAA ACAAAGGGAT TTTGAAAGAG GAGAAAATTA AAAAAAAAAA 3065 .......... .......... .......... .......... .......... .......... 456 GAAAAAGAAG GGAGAACGAG TGAGAGGGAG AGAAGAACGA AGAGGAAAGC AAAGAACTTG 3125 .......... .......... .......... .......... .......... .......... 456 AGGAGTAGCT TGCGTGATCA CGAATTCTTC GCTGGAGGTA GGTTATGGTT TATGCTATTT 3185 .......... .......... .......... .......... .......... .......... 456 CATAGTAAAC TCTTAATAGC GAATGATATG TGTTGGGTAG TATTGTAAAG TCTTCTATAT 3245 .......... .......... .......... .......... .......... .......... 456 GCTTAATTGT GTGCTTGCAT GACGTGATTA TATAATTGTG ATAAAATAAG CATGATGAGG 3305 .......... .......... .......... .......... .......... .......... 456 CTATTGAATC TTAAACCTTA AGACCTCTTT GTTAATGATG ATGCCTTGGT ATAAAAGAAG 3365 .......... .......... .......... .......... .......... .......... 456 GCTTGATGAA CTGAAAGAAT GAGAATTAGG GGATCGGAGT GTCACGTTTC GACACCAGGA 3425 .......... .......... .......... .......... .......... .......... 456 TAGTATGGAT CGGGTGTCAC GTTCCGACAC CAGGATAGTA TAGATCGGGT GTCACGTTCC 3485 .......... .......... .......... .......... .......... .......... 456 GACACCAGGA TAGTATGGAT CGGGTGTCAC GTTTTGACAC CAGGATAGTA AAGAGAATGA 3545 .......... .......... .......... .......... .......... .......... 456 ATCTTGAATT ATGCTAATAT ACTCAGATTT AATGAACCTG TTTCCCAAAT GAGTATGGTG 3605 .......... .......... .......... .......... .......... .......... 456 TGGAGGCTTG AGTCCTCATA GATGTGCTTG GGTTGTGCCC AATGGTTATG GTACTTGTTG 3665 .......... .......... .......... .......... .......... .......... 456 TTGTCACCTG TTTAGTATTG TAGTTGATTT TATGTTATTA TCTGATATAT ATTGCTTTCT 3725 .......... .......... .......... .......... .......... .......... 456 ATTTTGAGTT GGCCGATGAT ACCTACTCAG TACTTGTGCC TTGTACTGAC CCCTACTTGT 3785 .......... .......... .......... .......... .......... .......... 456 ATGTTTCTTT CTTTGTTATT TGTGGAGTGC AGCAAACGTG CCACAACTTC GACTCAACCG 3845 || || | || || || .......... .......... .......... ..GAACCGAG CC-CATCT.. .......... 471 CAACTCTAGC CAGACTTCAG CATAATCAGA TTTCAGGTGA GCTATTGTTC CTAGCTCGGA 3905 .......... .......... .......... .......... .......... .......... 471 CTGGATTCTT TCTTTCAGGT CTTGATGTCT TGAAGTTCGG ACATGGACCA TCTCTTTTAT 3965 .......... .......... .......... .......... .......... .......... 471 TTATTTTAGC TTCTTAGATA CTCTTAGATT TAGTAATTTG AGGATAGATG TTCTTGTGAT 4025 .......... .......... .......... .......... .......... .......... 471 GATGACTTCC AGATTTTGGG GATAATGATA AGTTTTGAGT TTTAGAAGTT AATTATTGAT 4085 .......... .......... .......... .......... .......... .......... 471 TTCGTTAATG AGTTTTAAGT TTTCCGTATT ATATTCTGTT TATTATGGTT GAAATGTTGG 4145 .......... .......... .......... .......... .......... .......... 471 GGTTTAGATT GGTTGGTTCG CTCACATAGG AGGGTAAGTG TGGGTGCCAC TCACGGCTCG 4205 .......... .......... .......... .......... .......... .......... 471 TTTTGGGTCG TGACAAACTT GGTATCAGAG CATTAGGTTC GTTGGTCTCA TCACACAAGA 4265 .......... .......... .......... .......... .......... .......... 471 ACAAGTCTAG TAGAGTCTTG AGGAATGGTA GGGGGACGCC TTTACTTTTC TTTGAGAGGC 4325 .......... .......... .......... .......... .......... .......... 471 TATAAGACTT AAGGAAAATT CCATTCTTTC TTTCTTTCGT GCTATTACTT GGATCCAATT 4385 .......... .......... .......... .......... .......... .......... 471 GGTATCTAGG TGATACAAAT TGGTATCTGA CCATCTTCAC TCTATTTCGC AGATGGTTAG 4445 .......... .......... .......... .......... .......... .......... 471 AACTAGAGCA ACAGCTGCGC CGACACCAAC ACCGGCAAAA CAAGATGCGT CTGAACCAGC 4505 .......... .......... .......... .......... .......... .......... 471 CACTGAGGCT GTAGCTCGAA GAGGAGCAGT GGCAAGAGGC CGCGGTAGAG GGTACTAGGG 4565 |||||||||| .......... .......... .......... .......... .......... GGTACTAGGG 481 CGGTGACTCC TCCACCGACT GAGGAAGTAT TAAGAGAGGG TGAGGAAGGG GGAAATGAAC 4625 |||||||||| |||||||||| ||||||||| ||||||| || ||||| ||| | || ||||| CGGTGACTCC TCCACCGACT GAGGAAGTAA TAAGAGAAGG GGAGGATGGG GAAACTGAAC 541 AAGTGCAGAA CGAGGAATTA CCACCCCAAC CTACCCTAGA GATGATTAAT CAGGTTCTTG 4685 ||||||| || |||||| | |||||||||| |||||| ||| |||||| ||| |||||||| | AAGTGCAAAA TGAGGAAATG CCACCCCAAC CTACCCCAGA GATGATCAAT CAGGTTCTGG 601 CTTATCTTAG CGGGTTATCT GATCAAGGCC AGACACCTCC AGTGTTTTCT GCACCAGTAC 4745 |||||||||| ||| |||||| |||||||| | | ||||||| |||||||||| || ||| || CTTATCTTAG CGGTTTATCT GATCAAGGTC AAGCACCTCC AGTGTTTTCT GCGCCAACAC 661 CTCAGGTTCC GGGAGTACAA CATACAGCTG CTGTGGCTCC CCGCATGGAT GCCTCATTGG 4805 ||| |||| | | ||||||| ||| | ||| || ||||||| |||||||||| | ||||| CTCCGGTTTC AGAAGTACAA CATGCGGCTA CTATGGCTCC CCGCATGGAT GTTCCATTGC 721 AAATAGGCAC GTTTCCTCGG TTGACTACAG GGCCTATAAT GACAAGTGAC CAGCACGAAC 4865 | ||||| || ||||| || |||||||| | |||||||||| ||||| ||| ||||| |||| ACATAGGTAC ATTTCCACGT TTGACTACTG GGCCTATAAT GACAAATGAT CAGCATGAAC 781 TTTTCAGTAA GTTCTTGAAG TTGAAACCTC CAGTTTTCAA GGGT 4909 |||||||||| ||||||||| |||||||||| | || ||||| |||| TTTTCAGTAA GTTCTTGAAA TTGAAACCTC CGGTCTTCAA GGGT 825 hqPGS_C08HBa0294K15.1+_SGN-U335932- (4556 4909) ******************************************************************************** EST sequence 73 -strand 775 n (File: SGN-U335930-) 1 GGCAAAAATT CGGATTTCGG CCTTACCAGA AACCGGCAAC GGCAAAATCC TTCCAAGAGG 61 TGGTAGACTT TGTTATAGAA GTGGAAGGAG TGAAGCCAGA CGACTTCACC CCGACATCGA 121 CATCATAAAG GTTTCGAAAG GGAGGTGAGT TTAATGGTGC TTACACTAGA GGACAGGGTT 181 CGGGAAGTTA CTCAGTCCGA CCAATTCAGT CTTCACTACA GACTGTAGTT GGGGGTCCAC 241 CTTCGACCGG TCAACACTTC TCTGAGAGAC TTATGCATGA ACCCAGAGAG TGCTATGGGT 301 GTGGGGAGAT TGGACATATT AAGAGATATT GTCCAAAACA GAGTTACAGA CCTCCAAAGG 361 TTAGAGGTAG AGGTGGTCAT GGCAGAGTCC GTTATTCTGG AGGACGTGGC GGTCGAGGAA 421 ATGGTGGTCA CCAAAACGGC CGAGGTGATG GGCAAACTGG AGCCACTACA TCACAACATG 481 GTAGGGGCAA CAGACATAAG AATGATAGGG CCCATTGTTA CGCTTTCCCT GGGCGGTCTG 541 AAGCGGAGGA ATCTGATGTT GTCATCACAG GTAATCTTTT GGTTTGTGAT TGCATGGCTT 601 CTGTATTGTT TGATCCTGGA TCCACATTTT CTTATGTATC TTCCTCATTT GCTAATGGTC 661 TAACTTTACA TTGTGAATTA CTTGATATGC CTATTCGTGT TTCCCTGCAG CCCGGGGGAT 721 CCACTAGTTC TAGAGCGGCC GCCACCGCGG TGGAGCTCCA GCTATTTGTT TCAAN Predicted gene structure (within gDNA segment 1778 to 7785): Exon 1 5289 5550 ( 262 n); cDNA 3 265 ( 263 n); score: 0.800 Intron 1 5551 5586 ( 36 n); Pd: 0.000 (s: 0.86), Pa: 0.000 (s: 0.82) Exon 2 5587 6024 ( 438 n); cDNA 266 703 ( 438 n); score: 0.879 MATCH C08HBa0294K15.1+ SGN-U335930- 0.849 700 0.903 C PGS_C08HBa0294K15.1+_SGN-U335930- (5289 5550,5587 6024) Alignment (genomic DNA sequence = upper lines): CAGATTTGCG GATTTCAGCC TTA-CAGGTA GCTGCTGCAG CAAAATCCTT TCAGGAGGTG 5347 || | | || |||||| ||| ||| ||| | | || | | |||||||||| || |||||| CAAAAATTCG GATTTCGGCC TTACCAGAAA CCGGCAACGG CAAAATCCTT CCAAGAGGTG 62 GTAGATTTTG TAATAGAAGT GGAGGGAGTG AAGCCAGACG ACTTCACCAT GGCATCAATA 5407 ||||| |||| | |||||||| ||| |||||| |||||||||| |||||||| | |||| | | GTAGACTTTG TTATAGAAGT GGAAGGAGTG AAGCCAGACG ACTTCACCCC GACATCGACA 122 TCTAAGAAGT TTCATAAAGG AGGTGATTTT AATGGTTTTT AATCCAGAGG GCAGAGTTCA 5467 || | | || ||| || || |||||| ||| |||||| || | | ||||| ||| |||| TCATAAAGGT TTCGAAAGGG AGGTGAGTTT AATGGTGCTT ACACTAGAGG ACAGGGTTCG 182 GGAGGTTATC CAGCCCGACC TATTCAGTCT TCACTACAAG CTGTAGCTGG GGGTCCACCG 5527 ||| |||| ||| |||||| ||||||||| |||||||| |||||| ||| ||||||||| GGAAGTTACT CAGTCCGACC AATTCAGTCT TCACTACAGA CTGTAGTTGG GGGTCCACCT 242 CAGACCGGTC AACATTTCTC TGAGTTTGGA GGTTATCCCC AGACTCTGTC GTTCTCATAG 5587 |||||||| |||| ||||| ||| | TCGACCGGTC AACACTTCTC TGA....... .......... .......... .........G 266 AGACCTATGC TTTAATCAAG AGAGTGTTAT GGATGTGGAG AGACTGGACA TATTAAGAGG 5647 |||| ||||| | || | || |||||| ||| || ||||| | ||| |||||| ||||||||| AGACTTATGC ATGAACCCAG AGAGTGCTAT GGGTGTGGGG AGATTGGACA TATTAAGAGA 326 TATTGTCCAA AACAGAGTTA CAGACCCCCA ATAGTCAGAG GTAGAGGTGG TCATGGGAGA 5707 |||||||||| |||||||||| |||||| ||| | || |||| |||||||||| |||||| ||| TATTGTCCAA AACAGAGTTA CAGACCTCCA AAGGTTAGAG GTAGAGGTGG TCATGGCAGA 386 GGTCGCTATT CTGGAGGACG TGGTGGCCGA GGTAATGGTG GTCACCAAAA CGGCCGGGGT 5767 | || |||| |||||||||| ||| || ||| || ||||||| |||||||||| |||||| ||| GTCCGTTATT CTGGAGGACG TGGCGGTCGA GGAAATGGTG GTCACCAAAA CGGCCGAGGT 446 GACAGGCAAA CTGGAACTTC TGTAGCTCAA CATTGTAGGG GCAACGGGCA GACCGGTGAT 5827 || |||||| ||||| | | | | | ||| ||| |||||| ||||| | || | |||| GATGGGCAAA CTGGAGCCAC TACATCACAA CATGGTAGGG GCAACAGACA TAAGAATGAT 506 AGGGCCCATT GTTATGCTTT CCCTGGGAGG TCTGAAGCGG AGACATCTGA TGCCGTCATC 5887 |||||||||| |||| ||||| ||||||| || |||||||||| || |||||| || |||||| AGGGCCCATT GTTACGCTTT CCCTGGGCGG TCTGAAGCGG AGGAATCTGA TGTTGTCATC 566 ACAGGTAATC TTTTGGTTTG TGATTGCATG GCTTCTGTAT TGTTTGATCC TGGATCCACA 5947 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAGGTAATC TTTTGGTTTG TGATTGCATG GCTTCTGTAT TGTTTGATCC TGGATCCACA 626 TTTTCATATG TATCTTCCTC ATTTGCTACT GGTCTTAATT TACATTATGA ATTGCTTGAC 6007 ||||| |||| |||||||||| |||||||| | ||||| | || |||||| ||| ||| ||||| TTTTCTTATG TATCTTCCTC ATTTGCTAAT GGTCTAACTT TACATTGTGA ATTACTTGAT 686 ATACCTATTC GTGTTTC 6024 || ||||||| ||||||| ATGCCTATTC GTGTTTC 703 hqPGS_C08HBa0294K15.1+_SGN-U335930- (5289 5550,5587 6024) ******************************************************************************** EST sequence 76 -strand 797 n (File: SGN-U335933-) 1 TTCACCCCAA CATCGACATC AAAAAGGCTT CGAAAGGGAG GTGAGTTTAA TGGTTCTTAC 61 ACTAGAGGAC AGGGTTCGGG AAGTTACTCA GTCCGACCAA TTGAGTCTTC ACTACAGACT 121 GTAGTTGGGG GACCACCTCA GACCGGTCAA CACTTCTCCG AGGGGCCTAG GATTGACTCC 181 AGAGAATGGT ATGGATGTGG GGAGATTGGA CATATTAGGA AAAATTGTCC CAGACAAAGT 241 TATAGACCCC CAATAGCTAG AGGTAGAGGT GGTCATGGTA GAGGCCGTTA TTCTGGAGGA 301 CGTGGTGGTC GAGGTAATGG TGGTCACCAA AACGGCAGAG GTAATGGGCA AACTTGGGCC 361 ACTACATCAC AACATGGTAG GGGCAACGGA CAGACGAACG ATAGGGCCCA TTGTTACGCT 421 TTCCCTGGGC GGTGTGAAGC GGAGGCATCT GATGTTGTCA TCACAGGTAA TCTTCTGGTT 481 TGTGATTGCA TGGCTTCTGT ATTGTTTGAT CCTGGATCCA CGTTTTCTTA TGTATCTTCC 541 TTATTTGCTT TCTTTTCCTC TGGCTACTAA GATGTTTCAG TTCGCCAGGT TGTCTCTTGC 601 CTGCCCATGG ATTCAGCAGC AGTTCGAAAG GTTGCCCTAT TCGGGAATCT CCGGATCTAT 661 GCTTATTTTC AACTCCCCGA AGCATTTCGT CGATTACTAC GCCCTTCCTC GTCTCTGGGT 721 GCCTAGGTAT CCACCGCCTG CAGCCCGGGG GATCCACTAG TCTAGAGCGG CCGCCACCGC 781 GTGGAGCTCC AGCAATT Predicted gene structure (within gDNA segment 2494 to 9306): Exon 1 5390 5550 ( 161 n); cDNA 1 161 ( 161 n); score: 0.789 Intron 1 5551 5586 ( 36 n); Pd: 0.000 (s: 0.86), Pa: 0.000 (s: 0.78) Exon 2 5587 5974 ( 388 n); cDNA 162 549 ( 388 n); score: 0.858 MATCH C08HBa0294K15.1+ SGN-U335933- 0.838 549 0.689 C PGS_C08HBa0294K15.1+_SGN-U335933- (5390 5550,5587 5974) Alignment (genomic DNA sequence = upper lines): TTCACCATGG CATCAATATC TAAGAAGTTT CATAAAGGAG GTGATTTTAA TGGTTTTTAA 5449 |||||| |||| | ||| || | | || | || |||| |||| ||||| ||||| ||| TTCACCCCAA CATCGACATC AAAAAGGCTT CGAAAGGGAG GTGAGTTTAA TGGTTCTTAC 60 TCCAGAGGGC AGAGTTCAGG AGGTTATCCA GCCCGACCTA TTCAGTCTTC ACTACAAGCT 5509 | ||||| | || |||| || | |||| || | |||||| | || ||||||| |||||| || ACTAGAGGAC AGGGTTCGGG AAGTTACTCA GTCCGACCAA TTGAGTCTTC ACTACAGACT 120 GTAGCTGGGG GTCCACCGCA GACCGGTCAA CATTTCTCTG AGTTTGGAGG TTATCCCCAG 5569 |||| ||||| | ||||| || |||||||||| || ||||| | | GTAGTTGGGG GACCACCTCA GACCGGTCAA CACTTCTCCG A......... .......... 161 ACTCTGTCGT TCTCATAGAG ACCTATGCTT TAATCAAGAG AGTGTTATGG ATGTGGAGAG 5629 | | |||| | || | || |||| | || ||||| |||||| ||| .......... .......GGG GCCTAGGATT GACTCCAGAG AATGGTATGG ATGTGGGGAG 204 ACTGGACATA TTAAGAGGTA TTGTCCAAAA CAGAGTTACA GACCCCCAAT AGTCAGAGGT 5689 | |||||||| ||| || | |||||| | | || ||||| | |||||||||| || |||||| ATTGGACATA TTAGGAAAAA TTGTCCCAGA CAAAGTTATA GACCCCCAAT AGCTAGAGGT 264 AGAGGTGGTC ATGGGAGAGG TCGCTATTCT GGAGGACGTG GTGGCCGAGG TAATGGTGGT 5749 |||||||||| |||| ||||| || |||||| |||||||||| |||| ||||| |||||||||| AGAGGTGGTC ATGGTAGAGG CCGTTATTCT GGAGGACGTG GTGGTCGAGG TAATGGTGGT 324 CACCAAAACG GCCGGGGTGA CAGGCAAACT GGAACTTCTG TAGCTCAACA TTGTAGGGGC 5809 |||||||||| || | ||| | |||||||| | | || | | ||||| | |||||||| CACCAAAACG GCAGAGGTAA TGGGCAAACT TGGGCCACTA CATCACAACA TGGTAGGGGC 384 AACGGGCAGA CCGGTGATAG GGCCCATTGT TATGCTTTCC CTGGGAGGTC TGAAGCGGAG 5869 ||||| |||| | ||||| |||||||||| || ||||||| ||||| ||| |||||||||| AACGGACAGA CGAACGATAG GGCCCATTGT TACGCTTTCC CTGGGCGGTG TGAAGCGGAG 444 ACATCTGATG CCGTCATCAC AGGTAATCTT TTGGTTTGTG ATTGCATGGC TTCTGTATTG 5929 ||||||||| |||||||| |||||||||| ||||||||| |||||||||| |||||||||| GCATCTGATG TTGTCATCAC AGGTAATCTT CTGGTTTGTG ATTGCATGGC TTCTGTATTG 504 TTTGATCCTG GATCCACATT TTCATATGTA TCTTCCTCAT TTGCT 5974 |||||||||| ||||||| || ||| |||||| ||||||| || ||||| TTTGATCCTG GATCCACGTT TTCTTATGTA TCTTCCTTAT TTGCT 549 hqPGS_C08HBa0294K15.1+_SGN-U335933- (5390 5550,5587 5974) ******************************************************************************** EST sequence 44 +strand 912 n (File: SGN-U335931+) 1 TGGTTAGAGC CANNGGGNNT TTGTAANGTA TGTATNCTGA TCGTANNNAT CGACAACACT 61 TGGAATCACC GCGGTGGCGG CCGCTCTAGA ACTAGTGGAT CCCCCGGGCT GCAGGAATTC 121 TGCACGAGGC ACCTAGCCCA TCTGGTACTA AGGCGGTGAC ACCTCCACCA ACTGAGGAAG 181 TGGTAAGAGA GGGTGAGGAT GGGGAGAATG AACAAGTGCA GAATGAGGAA TTGCCACCCC 241 AACCTACCCA AGAGATGATC AATCAGGTTC TTGCTTACCT TAGCGGGTTA TCTGATCAAG 301 GCCAAGCACC TCCAGTGTTT TCTGCACTAG CACCTCAGGC TCCGGAGGTA CAACATGCGC 361 CTACTGTGAC TCCCCGCATC GATACCTCAT TGGAAATAGG AACGTTTCCC CGTCTGACTA 421 CAGGGCCTAT AATGACAAAT GATCAGCATG AACTTTTTAG TAAGTTCTTG AAATTGAAAC 481 CTCAAGTCTA CAAGGGTGTT GAATCTGAGG ATGCCTACGA TTTTCTGGTT GACTGTCATG 541 AGCTACTACA CAAGATGGGT ATAGTAGAAC GGTTTGGTGT TGAGTTTGTG ACTTATCAGT 601 TTCAAGGGAA CGCCAAAATG TGGTGGCGGT CACATGTTGA GTGTCAACCA ACAGAGGCAC 661 CACGTATGAC TTGGGCATCA TTCTCTAGCT TGTTTATGGA GAAGTATATC CCCCGGACTT 721 TGAGGGATAG GAAAAGAGAT GAGTTTTTGA GCCTAGAACA AAGTAGGATG TTGGTTACTG 781 CATTTGAAGG CTAGTTTCGT GCCTTATCCC GGGATTCCAC CCAACTTTGT TTCAGTCCAC 841 AAAACCGGAT TCCCCCGTTT GTGAAAGGTT TTAGATCCAA ATTGCGAATT TAAACCTTAC 901 AGTAGCGGCT AC Predicted gene structure (within gDNA segment 2166 to 7554): Exon 1 4556 5323 ( 768 n); cDNA 144 910 ( 767 n); score: 0.865 MATCH C08HBa0294K15.1+ SGN-U335931+ 0.865 768 0.842 C PGS_C08HBa0294K15.1+_SGN-U335931+ (4556 5323) Alignment (genomic DNA sequence = upper lines): GGTACTAGGG CGGTGACTCC TCCACCGACT GAGGAAGTAT TAAGAGAGGG TGAGGAAGGG 4615 ||||||| || ||||||| || |||||| ||| |||||||| |||||||||| |||||| ||| GGTACTAAGG CGGTGACACC TCCACCAACT GAGGAAGTGG TAAGAGAGGG TGAGGATGGG 203 GGAAATGAAC AAGTGCAGAA CGAGGAATTA CCACCCCAAC CTACCCTAGA GATGATTAAT 4675 | ||||||| |||||||||| |||||||| |||||||||| |||||| ||| |||||| ||| GAGAATGAAC AAGTGCAGAA TGAGGAATTG CCACCCCAAC CTACCCAAGA GATGATCAAT 263 CAGGTTCTTG CTTATCTTAG CGGGTTATCT GATCAAGGCC AGACACCTCC AGTGTTTTCT 4735 |||||||||| |||| ||||| |||||||||| |||||||||| | ||||||| |||||||||| CAGGTTCTTG CTTACCTTAG CGGGTTATCT GATCAAGGCC AAGCACCTCC AGTGTTTTCT 323 GCACCAGTAC CTCAGGTTCC GGGAGTACAA CATACAGCTG CTGTGGCTCC CCGCATGGAT 4795 |||| || || |||||| ||| || |||||| ||| | || ||||| |||| |||||| ||| GCACTAGCAC CTCAGGCTCC GGAGGTACAA CATGCGCCTA CTGTGACTCC CCGCATCGAT 383 GCCTCATTGG AAATAGGCAC GTTTCCTCGG TTGACTACAG GGCCTATAAT GACAAGTGAC 4855 ||||||||| ||||||| || |||||| || ||||||||| |||||||||| ||||| ||| ACCTCATTGG AAATAGGAAC GTTTCCCCGT CTGACTACAG GGCCTATAAT GACAAATGAT 443 CAGCACGAAC TTTTCAGTAA GTTCTTGAAG TTGAAACCTC CAGTTTTCAA GGGTGCTGAA 4915 ||||| |||| |||| ||||| ||||||||| |||||||||| ||| | ||| ||||| |||| CAGCATGAAC TTTTTAGTAA GTTCTTGAAA TTGAAACCTC AAGTCTACAA GGGTGTTGAA 503 TCTGAGGATG CCTATGACTT TCTGGTTGAT TGTCATGAGT TGCTACATAA GATGCGCATA 4975 |||||||||| |||| || || ||||||||| ||||||||| | ||||| || |||| | ||| TCTGAGGATG CCTACGATTT TCTGGTTGAC TGTCATGAGC TACTACACAA GATGGGTATA 563 GTGGAACGAT TTGGCGTTGA GTTTGTGACC TATCAGTTTT AGGGGAACGC CAAAATGTGG 5035 || ||||| | |||| ||||| ||||||||| ||||||||| | |||||||| |||||||||| GTAGAACGGT TTGGTGTTGA GTTTGTGACT TATCAGTTTC AAGGGAACGC CAAAATGTGG 623 TGGCGGTCAT ATGTTGAGTG TCAACCAGCA CAGTCACCAC CTATGACTTG GGCATCATTC 5095 ||||||||| |||||||||| ||||||| || || |||||| ||||||||| |||||||||| TGGCGGTCAC ATGTTGAGTG TCAACCAACA GAGGCACCAC GTATGACTTG GGCATCATTC 683 TCTAGCTTGT TTATGGAGAA TTATATACCT CGGACTTTGA GGGATAGGAG GAGAGATAAG 5155 |||||||||| |||||||||| ||||| || |||||||||| ||||||||| |||||| || TCTAGCTTGT TTATGGAGAA GTATATCCCC CGGACTTTGA GGGATAGGAA AAGAGATGAG 743 TTCCTGAGCT TAGAGCAAGG CAGGATGTCG GTTACTGCTT ATG-AGGCTA AGTTTTGTGC 5214 || ||||| |||| ||| | ||||||| | |||||||| | || ||||| ||||| |||| TTTTTGAGCC TAGAACAAAG TAGGATGTTG GTTACTGCAT TTGAAGGCT- AGTTTCGTGC 802 ACTATCCAGG TATGCCACCC AGCTTTGCTT CAGTCCACAA GAGCGGATTC GTCGTTTCGT 5274 ||||| || || |||||| | ||||| || |||||||||| | ||||||| | || || CTTATCCCGG GATTCCACCC AACTTTGTTT CAGTCCACAA AACCGGATTC CCCCGTTTGT 862 GAAAGGGTTG AGGTCAGATT TGCGGATTTC AGCCTTACAG GTAGCTGCT 5323 |||||| || || || | | |||| |||| | ||||||| ||||| ||| GAAAGGTTTT AGATCCAAAT TGCGAATTTA AACCTTACA- GTAGCGGCT 910 hqPGS_C08HBa0294K15.1+_SGN-U335931+ (4556 5323) ******************************************************************************** EST sequence 51 +strand 1307 n (File: SGN-U346572+) 1 NATAAAACGG ATCCGCGGGG GGCGCTCAGA ACTAGTGGAT CCCCCGGGCT GCAGGAATCG 61 GCACGAGGAG ATGATCAACC AGGTTCTTTC TCATCTTAGC GGGTTATCTG ATCAGGGCCA 121 GACACCTCCA GTGTTTCCTG TACCAGCACC TCAGGTTCCG GGAGTACAAC ATGCAGCTGT 181 TGTGGCTCTC CGCATGGATG CCTCATTGGA AATAGGCACA TTTCCTCGAT TGACTACAGG 241 GCCTATAATG ACGAGTGATC AACATGAACT TTTCACTAAA TTCTTGAAGT TGAAACCTCT 301 AGTCTTCAAG GGTGCTGAAT CTGAGGATGC CTATGATTTT CTTGTTGATT GTCATGAGCT 361 GCTACATAAG ATGGACATAG TAGAACGGTT CGGGGTTGAG TTTGTGACCT ATCAATTTCA 421 GGGAAATGTC AAAATGTGGT GGCGGTCGTA TGTTGAGTGT CAACCAGCAC AGCACCACCT 481 ATGACTTGGG CATCATTCTC TAGCTTATTT ATGGAAAAGT GTATACCCCG GACGTTGAGG 541 GATAGGAGGA GAGATGAGTT CCTGAGTCTA TAGCAAGGCA GGATGTCTGT TACTGCTTAT 601 GAGGCTAAAT TTTGTGCACT ATCCAGGTAT GCCACCCAGC TTTGCTTCAG TCCACAAGAG 661 CGGATTCACC GTTTTGTGAA AGGATTGAGG TCAGATTTGC AGATCCCAGC CCTACAGGTA 721 GCTGCNTGCA GCAAATTCTT TCAGGAAGTG GTTGACTTTA TGATAGAGGT GGAGGGGGTG 781 AAATCAGAAT ACTTTCACAT GGCGTCGACC TCTAAGAAAG TCCGCACGGG AGGTGAGTTT 841 AGTGATTCAT ACTCCAAAGG GAAGAAGTTC AGGAGGTAAC CAGCTCGACC TATTTGTCTT 901 TACTACCGGG TGAAGGTAGG GGGCCATCCC AGACCATCCA ACATTCCCTA CTCCTGGGGG 961 GAAAGCTGGT AAAATGAAAA AGGGAAAAGG CCTTGCCTTG GAATTTTGGG GGGAAAAACC 1021 TCTGGAAACT GATAAATCTA AAAATGGTAA GATCAAAGAA TTCTGGGAAA AAATGGTTTT 1081 CCAAATTTCG AAACTAAAGG GTAGGAAAAA CTGAATTGGC CCACCCGGAA AAACCCCTAT 1141 AGGAAGGAAA AAATTGCCAC CCCCCGGAAT CCTCTTCCGG GGGGAAAAGG TAAAAAAAAA 1201 AAAAAGAGGG GCTCCCTTCG TTGAAANNNA NAAAAAAAAA NNNNNNNNNN NNNNNNNNNN 1261 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNTT Predicted gene structure (within gDNA segment 3169 to 11977): Exon 1 4665 5545 ( 881 n); cDNA 69 947 ( 879 n); score: 0.868 Intron 1 5546 6023 ( 478 n); Pd: 0.000 (s: 0.72), Pa: 0.000 (s: 0.68) Exon 2 6024 6149 ( 126 n); cDNA 948 1066 ( 119 n); score: 0.690 Intron 2 6150 8167 (2018 n); Pd: 0.539 (s: 0.66), Pa: 0.939 (s: 0) Exon 3 8168 8172 ( 5 n); cDNA 1067 1071 ( 5 n); score: 0.800 Intron 3 8173 11062 (2890 n); Pd: 0.000 (s: 0), Pa: 0.981 (s: 0) Exon 4 11063 11069 ( 7 n); cDNA 1072 1078 ( 7 n); score: 0.857 MATCH C08HBa0294K15.1+ SGN-U346572+ 0.846 1019 0.780 C PGS_C08HBa0294K15.1+_SGN-U346572+ (4665 5545,6024 6149,8168 8172,11063 11069) Alignment (genomic DNA sequence = upper lines): AGATGATTAA TCAGGTTCTT GCTTATCTTA GCGGGTTATC TGATCAAGGC CAGACACCTC 4724 ||||||| || ||||||||| || |||||| |||||||||| |||||| ||| |||||||||| AGATGATCAA CCAGGTTCTT TCTCATCTTA GCGGGTTATC TGATCAGGGC CAGACACCTC 128 CAGTGTTTTC TGCACCAGTA CCTCAGGTTC CGGGAGTACA ACATACAGCT GCTGTGGCTC 4784 |||||||| | || ||||| | |||||||||| |||||||||| |||| ||||| | |||||||| CAGTGTTTCC TGTACCAGCA CCTCAGGTTC CGGGAGTACA ACATGCAGCT GTTGTGGCTC 188 CCCGCATGGA TGCCTCATTG GAAATAGGCA CGTTTCCTCG GTTGACTACA GGGCCTATAA 4844 ||||||||| |||||||||| |||||||||| | |||||||| ||||||||| |||||||||| TCCGCATGGA TGCCTCATTG GAAATAGGCA CATTTCCTCG ATTGACTACA GGGCCTATAA 248 TGACAAGTGA CCAGCACGAA CTTTTCAGTA AGTTCTTGAA GTTGAAACCT CCAGTTTTCA 4904 |||| ||||| || || ||| ||||||| || | |||||||| |||||||||| | ||| |||| TGACGAGTGA TCAACATGAA CTTTTCACTA AATTCTTGAA GTTGAAACCT CTAGTCTTCA 308 AGGGTGCTGA ATCTGAGGAT GCCTATGACT TTCTGGTTGA TTGTCATGAG TTGCTACATA 4964 |||||||||| |||||||||| |||||||| | |||| ||||| |||||||||| ||||||||| AGGGTGCTGA ATCTGAGGAT GCCTATGATT TTCTTGTTGA TTGTCATGAG CTGCTACATA 368 AGATGCGCAT AGTGGAACGA TTTGGCGTTG AGTTTGTGAC CTATCAGTTT TAGGGGAACG 5024 ||||| ||| ||| ||||| || || |||| |||||||||| |||||| ||| |||| || | AGATGGACAT AGTAGAACGG TTCGGGGTTG AGTTTGTGAC CTATCAATTT CAGGGAAATG 428 CCAAAATGTG GTGGCGGTCA TATGTTGAGT GTCAACCAGC ACAGTCACCA CCTATGACTT 5084 ||||||||| ||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| TCAAAATGTG GTGGCGGTCG TATGTTGAGT GTCAACCAGC ACAG-CACCA CCTATGACTT 487 GGGCATCATT CTCTAGCTTG TTTATGGAGA ATTATATACC TCGGACTTTG AGGGATAGGA 5144 |||||||||| ||||||||| |||||||| | | | |||||| ||||| ||| |||||||||| GGGCATCATT CTCTAGCTTA TTTATGGAAA AGTGTATACC CCGGACGTTG AGGGATAGGA 547 GGAGAGATAA GTTCCTGAGC TTAGAGCAAG GCAGGATGTC GGTTACTGCT TATGAGGCTA 5204 |||||||| | ||||||||| || |||||| |||||||||| ||||||||| |||||||||| GGAGAGATGA GTTCCTGAGT CTATAGCAAG GCAGGATGTC TGTTACTGCT TATGAGGCTA 607 AGTTTTGTGC ACTATCCAGG TATGCCACCC AGCTTTGCTT CAGTCCACAA GAGCGGATTC 5264 | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTTTGTGC ACTATCCAGG TATGCCACCC AGCTTTGCTT CAGTCCACAA GAGCGGATTC 667 GTCGTTTCGT GAAAGGGTTG AGGTCAGATT TGCGGATTTC AGCCTTACAG GTAGCTGC-T 5323 ||||| || |||||| ||| |||||||||| ||| ||| | |||| ||||| |||||||| | ACCGTTTTGT GAAAGGATTG AGGTCAGATT TGCAGATCCC AGCCCTACAG GTAGCTGCNT 727 GCAGCAAAAT CCTTTCAGGA GGTGGTAGAT TTTGTAATAG AAGTGGAGGG AGTGAAGCCA 5383 ||||| |||| ||||||||| ||||| || ||| | |||| | |||||||| ||||| || GCAGC-AAAT TCTTTCAGGA AGTGGTTGAC TTTATGATAG AGGTGGAGGG GGTGAAATCA 786 GACGACTTCA CCATGGCATC AATATCTAAG AAGTTTCATA AAGGAGGTGA TTTTAATGGT 5443 || |||| |||||| || | |||||| || | | | |||||||| |||| || | GAATACTTTC ACATGGCGTC GACCTCTAAG AAAGTCCGCA CGGGAGGTGA GTTTAGTGAT 846 TTTTAATCCA GAGGGCAG-A GTTCAGGAGG TTATCCAGCC CGACCTATTC AGTCTTCACT 5502 | || |||| |||| || | |||||||||| || ||||| ||||||||| ||||| ||| TCATACTCCA AAGGGAAGAA GTTCAGGAGG -TAACCAGCT CGACCTATT- TGTCTTTACT 904 ACAAGCTGTA GCTGGGGGTC CACCGCAGAC CGGTCAACAT TTCTCTGAGT TTGGAGGTTA 5562 || | || | | | |||| | || | ||||| | |||||| | | ACCGGGTGAA GGTAGGGGGC CATCCCAGAC CATCCAACAT TCC....... .......... 947 TCCCCAGACT CTGTCGTTCT CATAGAGACC TATGCTTTAA TCAAGAGAGT GTTATGGATG 5622 .......... .......... .......... .......... .......... .......... 947 TGGAGAGACT GGACATATTA AGAGGTATTG TCCAAAACAG AGTTACAGAC CCCCAATAGT 5682 .......... .......... .......... .......... .......... .......... 947 CAGAGGTAGA GGTGGTCATG GGAGAGGTCG CTATTCTGGA GGACGTGGTG GCCGAGGTAA 5742 .......... .......... .......... .......... .......... .......... 947 TGGTGGTCAC CAAAACGGCC GGGGTGACAG GCAAACTGGA ACTTCTGTAG CTCAACATTG 5802 .......... .......... .......... .......... .......... .......... 947 TAGGGGCAAC GGGCAGACCG GTGATAGGGC CCATTGTTAT GCTTTCCCTG GGAGGTCTGA 5862 .......... .......... .......... .......... .......... .......... 947 AGCGGAGACA TCTGATGCCG TCATCACAGG TAATCTTTTG GTTTGTGATT GCATGGCTTC 5922 .......... .......... .......... .......... .......... .......... 947 TGTATTGTTT GATCCTGGAT CCACATTTTC ATATGTATCT TCCTCATTTG CTACTGGTCT 5982 .......... .......... .......... .......... .......... .......... 947 TAATTTACAT TATGAATTGC TTGACATACC TATTCGTGTT TCTACTCCGG TGGGTGAGTC 6042 ||||||| | ||| | | .......... .......... .......... .......... .CTACTCCTG GGGGGAAAGC 966 TGTGATAGTT GAAAAAGTGT ATAGGTCTTG TCTTGTGACT TTTGTGGGGA ACAATACTCA 6102 || | | | ||||||| | | ||| |||| |||| || | |||| ||||| | || ||| TG-GTAAAAT GAAAAAGGGA AAAGGCCTTG CCTTG-GAAT TTTGGGGGGA A-AAACCTC- 1022 TGTAGACTTG GTTATCTTAG AAATGGTTGA CTTCGATGTA ATTCTGGGTA TGACTTGGCT 6162 || | || || | | || |||||| | | || | | | ||||||| TGGAAAC-TG ATAAATCTAA AAATGG-TAA GATCAAAG-A ATTCTGG... .......... 1066 GTCTCCAAAT TTTGCAATCT TAGATTGTAA TGCTAAAACT GTAACGTCGG CCAAGCCTGG 6222 .......... .......... .......... .......... .......... .......... 1066 GACAGATCCG TTAGTGTGGG AGGGTGACTA CACTTCCACT CCATTTCGTA TTATCTCCTT 6282 .......... .......... .......... .......... .......... .......... 1066 TCTTCGTGCT AAGAGAATGG TTAGTAAGGG TTGTTTAGCT TTCTTGACAC ACCTCTAGGA 6342 .......... .......... .......... .......... .......... .......... 1066 TGATACTACC CAAGTACCTT CAATTGAGTC GATTTCGATA GTCCGTGAGT TTCTAGATGT 6402 .......... .......... .......... .......... .......... .......... 1066 GTTTCCTGCA GACCTTCCTC GTATGCCACC GAATAGAGAT ATTTATTTCT GTATTGATCT 6462 .......... .......... .......... .......... .......... .......... 1066 GGAGCCGGGT ACTCGCCCCA TTTCCATACC CCATTATAGG ATGGCTCCCG CTGAGTTAAG 6522 .......... .......... .......... .......... .......... .......... 1066 AGAGTTAAAG GCCCAACTTC AAGAGTTGTT AAGCAAAGGC TTTATTAGAC CAAGTGCATC 6582 .......... .......... .......... .......... .......... .......... 1066 CCCTTGGGGT GCTCCTATTT TATTTGTGAA GAAGAAGGAT GGAAGTTTTC GGATGTGCAT 6642 .......... .......... .......... .......... .......... .......... 1066 AGACTATAGG CAACTGAATA AGGTAATCAT TAAGAACAAG TATCCTCTTC CTCGCATCGA 6702 .......... .......... .......... .......... .......... .......... 1066 TGATTTGTTC GATCAGTTAC AAGGTGCTTG TACCTTCTAA AAAATTGATT TGAGATCTGG 6762 .......... .......... .......... .......... .......... .......... 1066 TTATCATCAA TTAAAAATAC GGGCAACGGA TGTGCCCAAG ACTGCTTTTT GGACCACGTA 6822 .......... .......... .......... .......... .......... .......... 1066 TGGGCATTAT GAGTTCCTAG TAATGTCTTT TGGGCTTACG AATTCCCCTG CTGCTTTCAT 6882 .......... .......... .......... .......... .......... .......... 1066 GAGCTTAATG AGCGGGATTT TTAAGCCATA TCTGGATCTC TTCGTCATTG TATTCATCGA 6942 .......... .......... .......... .......... .......... .......... 1066 TGACATACTG GTATACTCAA AGAGCAAGAA AGAACATGAG GAGCACTTGA GAATGGTATT 7002 .......... .......... .......... .......... .......... .......... 1066 GGAAATGTTG AGGGAGAAAG AGCTTTATGC CAAATTCTCT AAGTGTGAGT TTTGGCTAGA 7062 .......... .......... .......... .......... .......... .......... 1066 TTCAGTGTCC TTCTTGGGGC GTGTGGTTTA TAAGGATGAA GTGATGGTGG ATCCTTCTAA 7122 .......... .......... .......... .......... .......... .......... 1066 GGTCGAAGCA GTGAAGAGTT GGGTAAGACC TACTAATGTT ACAGAGGTAA GGAGCTTCGT 7182 .......... .......... .......... .......... .......... .......... 1066 TGGTTTAGCT AGCTACTACC GTCGATTTGT CAAGGGATTT TCTTCTGTTG CTTCTCAATT 7242 .......... .......... .......... .......... .......... .......... 1066 GACAAACTTG ACTAAGCAGA GTGTTCCATT TGTATGGTCG GACGAGTGTG AAGAAAGCTT 7302 .......... .......... .......... .......... .......... .......... 1066 TCAAAAGCTC AAGACCTTGT TGACTACTGC ACCAATTCTT ACCCTGCTAG TGGAAGGTAA 7362 .......... .......... .......... .......... .......... .......... 1066 GAATTTCATT GTTTATTGTG ATGCATCCTA TTTTGGTTTG GGTGCAGGGC TAATGCAAGA 7422 .......... .......... .......... .......... .......... .......... 1066 GAAGAATGTA ATTGCTTATG CTTCGAGGCA ATTAAAGGTG CATGAACGTA ATTATCCAAC 7482 .......... .......... .......... .......... .......... .......... 1066 CCATGATTTG GAGTTGGCTG CGGTAGTGTT TGCATTAAAG CAATGGAGAC ATTATCTATA 7542 .......... .......... .......... .......... .......... .......... 1066 TGGGGTTAAG TGTGAAGTCT ATACGGATCA TCGTAGTTTA CAGTATATCT TTACTCAGAA 7602 .......... .......... .......... .......... .......... .......... 1066 AGATTTGAAT TTGAGACAGA GGAGATGGAT GGAACTACTG AAGGACTATG ATATCACTAT 7662 .......... .......... .......... .......... .......... .......... 1066 CTTGTATCAT CCGGAAAAAG CTAATGTTGT GGCAGATGTT TTAAGTAGAA AGGCAGGGAA 7722 .......... .......... .......... .......... .......... .......... 1066 CATGGGAAGT CTAGCCCACT TGCAGGTTTC TAGACGCCCA TTGGCTAGAG AGGTTCAGAC 7782 .......... .......... .......... .......... .......... .......... 1066 TCTGGATAAT GACCTTATGA GGCTAGAAGT AAATGAGAAG GGAGGATTTT TGGTCTGTGT 7842 .......... .......... .......... .......... .......... .......... 1066 GGAGGCAAGA TCTTCCTTTC TTGATAAGAT TAAAGGAAAG CAGTTTACCG ATGAGAAACT 7902 .......... .......... .......... .......... .......... .......... 1066 GATCTGGATC CGAGATAAGG TGTTGCGAGG AGAGGTTAAA GAAGCAAAAA TCGATGAGGA 7962 .......... .......... .......... .......... .......... .......... 1066 AGGTGTTTTG AGGATTAAGG GAAGGGTACG TGTACCCCGC GTCGATGACT TGATTCACAC 8022 .......... .......... .......... .......... .......... .......... 1066 TGTTCTTACA GACGCTCATA GTTCAAGGTA TTCTATACAT CCTGGTGCAA CCAAGATGTA 8082 .......... .......... .......... .......... .......... .......... 1066 TCGTGATCTA AAGCAACATT TTTGGTGAAG TAGGATGAAG CGTGACATTG TTAATTTTGT 8142 .......... .......... .......... .......... .......... .......... 1066 TGCTCAATGC CCGAATTGTC TGCAGGTAAA GTATGAACAC CAGAGGCCTG GAGGGACACT 8202 | ||| .......... .......... .....GAAAA .......... .......... .......... 1071 TCAGAGAATG CCCATTCCTG AATGGAAGTG GGAGAGAATT GCAATGGACT TCGTGGTTAG 8262 .......... .......... .......... .......... .......... .......... 1071 TCTTCCAAAG ACAACGGGTA AGTATGACTC CATTTGGGTA ATTGTTGACA GATTAACTAA 8322 .......... .......... .......... .......... .......... .......... 1071 GTCTGCTCAT TTCATTCCGG TCAAGGTGAC TTATAATGCA GAGAAGTTAG CCAAACTTTA 8382 .......... .......... .......... .......... .......... .......... 1071 CATCTCAGAA ATTGTTCGAT TGCATGGAGT TCCACTTTCC ATTATATCAG ATAGAGGTAC 8442 .......... .......... .......... .......... .......... .......... 1071 GCAGTTTACT TCTAAATTTT GGAGAATATT GCATGCCGAA TTAGGTACTA GGTTGGATCT 8502 .......... .......... .......... .......... .......... .......... 1071 TAGTACTGCA TTTCACCCTC AGACTGATGG TCAGTCTGAG CGAACGATTC AGGTTTTGGA 8562 .......... .......... .......... .......... .......... .......... 1071 GGATATGCTT CATGCATGTG TGATAGGGTT TGGTGGTCAT TGGTATAACT TCTTACCCTT 8622 .......... .......... .......... .......... .......... .......... 1071 AGCAGAGTTT TCATACAACA ATAGCTATCA CTCAAGTATT GATGTGGCCC CATTTGAGGC 8682 .......... .......... .......... .......... .......... .......... 1071 ACTGTATGGG AGAAGATGTA GGTCTCCCAT TGGTGGTTTG ATGCATTTGA GGTTAGACCT 8742 .......... .......... .......... .......... .......... .......... 1071 TGGGGTACTG ACCTTCTGAG GGAATCGCTA GATAAAGTGA AATGCATTCA AGAAAAGCTT 8802 .......... .......... .......... .......... .......... .......... 1071 TTAGCGGCTC AAAGTAGACA AAAAGAATAT GCAGATCGAA AGGTTAGAGA CTTGGAGTTT 8862 .......... .......... .......... .......... .......... .......... 1071 ATGGAGGGTG AGCAAGTTTT GCTGAAGGTT TCACCCATGA AAGGGGTGAT GCGGTTTGGT 8922 .......... .......... .......... .......... .......... .......... 1071 AAGCTTAGTC CGAGGTATAT TGGTCCATTT GAAGTTCTGA AGCGCGTGGG GGAGGTAGCG 8982 .......... .......... .......... .......... .......... .......... 1071 TATGAATTAG CCTTGCCCCC AGGACTGTCA GGATTGCACC CGGTATTTCA TGTGTCTATG 9042 .......... .......... .......... .......... .......... .......... 1071 TTGAAAAGAT ACCATGGGGA TGGAAACTAC ATCATTCGTT GGGATTCAGT TCTTCTTGAT 9102 .......... .......... .......... .......... .......... .......... 1071 GAGAATTTGT CTTATGAGGA GGAGCCTGTT GCTATCTTAG ATAGAGAAGT ACGCAAGCTG 9162 .......... .......... .......... .......... .......... .......... 1071 AGGTCAAGGG AGATTGCATC CATCAAGGTT CAATGAAAGA ATCGACCAAT TGAAGAGTCC 9222 .......... .......... .......... .......... .......... .......... 1071 ACTTGGGAGA AGGAGGCTGA TATGCAAGAA AAATACCCAC ACCTGTTTAC AGATTCAGGT 9282 .......... .......... .......... .......... .......... .......... 1071 ACTCCTTTTC GCCCTTGTTT TTCTTCTTGT GATCGTTCAA GGACGAACGA TGGGTAAATT 9342 .......... .......... .......... .......... .......... .......... 1071 GGTGTCTATT GTAACGACCT GTTAGTCGTT TTGAGCAGTA GAGTTTATTT CTGTTAATAA 9402 .......... .......... .......... .......... .......... .......... 1071 CTGTCTGGGT CGATGGATAC CACGACGGAC CGTCGAGGGG GTCTCGTTCC AAAACACTTA 9462 .......... .......... .......... .......... .......... .......... 1071 GTTTCTGAAA AATTGGGTAC TGAGAACAAC TCTCTGAACT TCGCAATGGA AGAGCAGGAC 9522 .......... .......... .......... .......... .......... .......... 1071 GGACCGTCGT AGGCACGACG GACCGTCACA TGGTCTTAAA TAAAAATTGA GTCTCTAAAC 9582 .......... .......... .......... .......... .......... .......... 1071 TCTGTGACGA CTTAGCAGGA CGACCGTCGC AGGCACGAAG GACCGTCACA GACTGCGTAA 9642 .......... .......... .......... .......... .......... .......... 1071 CCCTGACTGG GTCGGATTTC TGTTAAAAGT TTTTAAGGGG TGTTTTGGAT TATTCCTGCT 9702 .......... .......... .......... .......... .......... .......... 1071 TATGATTATA AAGTTAGTGG TTTAATGTTA ATAATTCAAT TTCTTGGGGG TTAAAGGAGA 9762 .......... .......... .......... .......... .......... .......... 1071 CAACCTTGGA ATAAGTAATG GGTTACTTTT AGCATCTTTT ATACTTAATT ATATGGTAAT 9822 .......... .......... .......... .......... .......... .......... 1071 TAAGGTAAAA CAAAGGGATT TTGAAAGAGG AGAAAATTAA AAAAGAAAAA GAAAAAGAAG 9882 .......... .......... .......... .......... .......... .......... 1071 GGAGAACGAG CGAGAGGGAG AGAAGAACGA AGAGGAAAGC AAAGACCTTG AGGAGTAGCT 9942 .......... .......... .......... .......... .......... .......... 1071 TGCGTGATCA CGAATTCTTC GGTGGAGGTA GGTTATGGAT TATGCTATAG TAAACTCTTA 10002 .......... .......... .......... .......... .......... .......... 1071 ATAGCGAATG ATATGTGTTG GGTAGTATTG TAAAGTCTTC TATATGCTTA ATTGTGTGCT 10062 .......... .......... .......... .......... .......... .......... 1071 TGCATGACGT GATTATATAA TTGTGATAAA ATAAGCATGA TGAGGCTGTT GAATCTTAAA 10122 .......... .......... .......... .......... .......... .......... 1071 CCTTAAAACC TCTTTGTTAA TGATGATACC TTGGTATAAA AGAAGGCTTG ATGAACTGAA 10182 .......... .......... .......... .......... .......... .......... 1071 AGAATGAGAA TTAGGGGATC GGAGTGTCAC ATTCCGACAC CAGGATAGTA TGGATCGGGT 10242 .......... .......... .......... .......... .......... .......... 1071 GTCACGTTCC GACACCAGGA TAGTATGGAT CGGGTGTCAC GTTCCGACAC CAGGATAGTA 10302 .......... .......... .......... .......... .......... .......... 1071 TGGATCGGGT GTCACGTTCG ACACCAGGAT AGTATGGATC GAGTATCACG TTCCGACACC 10362 .......... .......... .......... .......... .......... .......... 1071 AGGATAGTAG AGGATCAGAG TGTCACGTTC CGACACCAGG ATAGTATGGA TCGGGTGTCA 10422 .......... .......... .......... .......... .......... .......... 1071 CGTTTTGACA CCAGGATAGT AAAAAGAATG AATCTTGAAT TATGCTAATA TACTCAAATT 10482 .......... .......... .......... .......... .......... .......... 1071 TAATGAACCT GTTTCCCAAA TGAGTATGGT GTGGAGGCTT GAGTCCTCAT AGATGTGCTT 10542 .......... .......... .......... .......... .......... .......... 1071 GGGTTGTGCC CAATGGTTAT GGTACTTGTT GTTGTCACCT GTTGAGTATT GTAGTTGATT 10602 .......... .......... .......... .......... .......... .......... 1071 TTATGTTATT ATCTGATGTA TATTGTTTTC TATTTTGAGT TGGCCGATGA TACCTACTCA 10662 .......... .......... .......... .......... .......... .......... 1071 GTACTTGTGC CTTGTACTGA CCCCTACTTG TATGTTTCTT TCTTTGTTAT TTGTGGAGTG 10722 .......... .......... .......... .......... .......... .......... 1071 CAACAAACGT GCCAACAACT TCGACTCAAC CACAACTCTA GCCAGACTTC AGCATAATCA 10782 .......... .......... .......... .......... .......... .......... 1071 GATTTCAGGG TGAGCTATTG TTCCTAGCTC GGACTGGATT CTTTCTTTCA GGTCTTGATG 10842 .......... .......... .......... .......... .......... .......... 1071 TCTTGAAGTT CGGACATGGA CCATCTCTTT TATTTATTTT AGCTTCTTAG ATACTCTTAG 10902 .......... .......... .......... .......... .......... .......... 1071 ATTTAGTAAT TTGAGGATAG ATGTTCTTGT GATGATGACT TCCAGATTTT GGGGATAATG 10962 .......... .......... .......... .......... .......... .......... 1071 ATAAGTTCTG AGTTTTAGAA GTTAATTATT GATTTCGTTA ATGAGTTTTA AGTTTTCCGC 11022 .......... .......... .......... .......... .......... .......... 1071 ATTATATTCT GTTTAATATT GTTGAAATGT TGGGGTTTAG ATTGGTT 11069 | ||||| .......... .......... .......... .......... AATGGTT 1078 hqPGS_C08HBa0294K15.1+_SGN-U346572+ (4665 5545) ******************************************************************************** EST sequence 71 -strand 800 n (File: SGN-U345415-) 1 GCAATCGCAA ATCCTTCAGG AATTTTCATG TATATCTCAT ATTTAAATGA TCCATAAAGG 61 TAGGTTGTAA CCACATCCAT CAAATGCATT TCAAGTTGCT CATGGACTGT GAAACTAATG 121 AGATAAACCA ATGTTATTGC ATCCATAACG GGTGAGTATG TCTCTTCATA TTCGACGCCA 181 GGCCTTTGAG AAAATATTTT TTGTTACAAC CCCGGTAGGT GACTCCATTG TTGCTAGAAG 241 AGTCTTTAGG AGTTATCCTA TATATTTCCC CAATAGAGTT ACTTGGGTGG ATTTGGTGGA 301 ATTCGATATG GTCGATTTTT ATTTTATCTT GGGAATGGAT TGGTTGCATG CTTGTTATGC 361 TTCCATAGAC TGTCGAACAA GAGTTGTTAA ATTCAACTTT CCTAATGAAC CTGTCTTAGA 421 GTGGAATGGC AGTAATTTAA TTCCTAAAGG TCATATCATC TCTTGTTTAA AATATTGCAA 481 AATAATCTCA AAAGTGTGAA TTTACCATAT TGTAAGAGTC AAAGATCTTG AGTCCGATAT 541 TCCTCCAATT GAGTCAATCA CCATAGTGAG AGAATTTTCG AAAATATCTT CCTCACATTG 601 ATGATTTGTT CGATCAGTTA CAAGGTGCTT GTACCTTCTC AAAAATCGAC TTGAGATCTG 661 GTTATCATCA ATTGAAAATA CGAGCAGCAG ATGTGCCCAA GACTGCTTTT CGGACCAGGT 721 ATGAGCATTA TGAGTTCCCT GCAGCCCGGG GGATCCACTA GTTCTAGAGC GGCCGCCACC 781 GCGGTGGAGC TCCAGCTTTT Predicted gene structure (within gDNA segment 101 to 8311): Exon 1 1209 1237 ( 29 n); cDNA 495 524 ( 30 n); score: 0.638 Intron 1 1238 3923 (2686 n); Pd: 0.124 (s: 0), Pa: 0.043 (s: 0) Exon 2 3924 3939 ( 16 n); cDNA 525 539 ( 15 n); score: 0.625 Intron 2 3940 6356 (2417 n); Pd: 0.639 (s: 0), Pa: 0.000 (s: 0.70) Exon 3 6357 6400 ( 44 n); cDNA 540 582 ( 43 n); score: 0.705 Intron 3 6401 6682 ( 282 n); Pd: 0.000 (s: 0.70), Pa: 0.000 (s: 0.90) Exon 4 6683 6839 ( 157 n); cDNA 583 738 ( 156 n); score: 0.904 MATCH C08HBa0294K15.1+ SGN-U345415- 0.904 246 0.308 C PGS_C08HBa0294K15.1+_SGN-U345415- (1209 1237,3924 3939,6357 6400,6683 6839) Alignment (genomic DNA sequence = upper lines): TGACAATTTA TAATAAT-CA ACAATCAAAG GTCTAATTAT CCAGATTATA AAGAACTCAA 1267 || |||||| ||| | | | | |||||| TGTGAATTTA CCATATTGTA AGAGTCAAAG .......... .......... .......... 524 TAATCCTAGA CCAAATCCAT GATCCCAATA CCTAGATTGG GGATTTTTCC ACCATAATTC 1327 .......... .......... .......... .......... .......... .......... 524 TCATATCAAA ACCCTCCCAC GTCAATAATT ACCCAAGGAA CTAAGTTCTA TGAATTGAAA 1387 .......... .......... .......... .......... .......... .......... 524 CATGAATTCG GCGAATAAAA ACCTTACCTT TAGCCTTAAG TATGGTGAAA AAACCTTCAA 1447 .......... .......... .......... .......... .......... .......... 524 GAACACACTT GGGGTCGTTC CTTAGCTATC AAAGTTCAGA AGTGTATAAT AAAACATTTT 1507 .......... .......... .......... .......... .......... .......... 524 TGAGGTTTTA AGTTGGGAGT TAAATAGTGT TTGTCCCGCT ATGGCGACCC CAACCCGCCA 1567 .......... .......... .......... .......... .......... .......... 524 CAGCGGCTTC GCCCTAGCAG AAATAATCCA GCTACAACGG CTTGCACAGA AACAGTGAGC 1627 .......... .......... .......... .......... .......... .......... 524 AAAATTAATA ATTCCAAACC CCCATTTCAC AACACACCAT TATCCCATGA CACACAAAAA 1687 .......... .......... .......... .......... .......... .......... 524 ATACACATTC ACGCTAAGAT CAATTCGGGA GTTCTACTCA CCTAAATTCA ATTAAGTAAA 1747 .......... .......... .......... .......... .......... .......... 524 AAGTCGTACT AGATCCTTAA AATCTTGCCT ATCCACTCAT GTAATCAAAT TCATTTATAG 1807 .......... .......... .......... .......... .......... .......... 524 ATCTCTCATT TGTTATCATA TTTTCTGATT TTGTCCAAAT CTAATACTAG AGTAGAAAAT 1867 .......... .......... .......... .......... .......... .......... 524 CTCAAGTTAC TACAAAAAAA TTTTTGGCCC CAATTCTTTC CCCGTTGGCT TTTTCCTAAC 1927 .......... .......... .......... .......... .......... .......... 524 GACGGAAATC AGGTCGCTAT AGATTCACTA TTTATAATTA TTGATTTATT GATTTAGATC 1987 .......... .......... .......... .......... .......... .......... 524 TTGATTTGAC TATTTTCTTA TCGAGTGAAT GAATATATAT AATAAACATA TATATATATA 2047 .......... .......... .......... .......... .......... .......... 524 TATATATATA TATATATATA AAATTTTAGT TTATTATTGC AATTACCGTT TAAGAAAAGG 2107 .......... .......... .......... .......... .......... .......... 524 TTTGGTAATG TCATTACTTC AACCACATCA TTATTATTTT TTTATAATAA AAACAAAATT 2167 .......... .......... .......... .......... .......... .......... 524 CTAAATAAAA ATTGGATTAA AATAACTCAC CCAAGTAAAG ACCCGCCCAA AATTCCTATA 2227 .......... .......... .......... .......... .......... .......... 524 ACCCATTAGT AATCCAATAC TTTCATTCCC AATTTTGTTA CGGGTGATAA TGTTGTTTGT 2287 .......... .......... .......... .......... .......... .......... 524 ACTATTCACA GATAGTAATT ATTGAAAAAT TCTTTTTGCG GTCGTAAAGC CACTACTGAG 2347 .......... .......... .......... .......... .......... .......... 524 GAATTGGAAG GGAGGGATAA ACAAGCTTTT GCAAAAACAT TAGACGTGAT GAAGTTTAGT 2407 .......... .......... .......... .......... .......... .......... 524 TTTATTTACG AAGCCCTACT GTTTAAAAGT GATGATATTA TGCATTAGTT CACAAATATC 2467 .......... .......... .......... .......... .......... .......... 524 AAATAGCAAA TTCAAATTAG TTCACAACTT TTGAAGTAAT GCCAGAACAT TAAACTCATG 2527 .......... .......... .......... .......... .......... .......... 524 TAACGACCTG TTAGTCGTTT TGAGCAGTAG AGTTTATTTC TGGTAATAAC TGTCTGGGTT 2587 .......... .......... .......... .......... .......... .......... 524 GACGGATCCC ACGACGGACC GTCATGGGCA CGACGGACCG TCGAGGGGGT CTCGTTCCAA 2647 .......... .......... .......... .......... .......... .......... 524 AATACTTAGT TTCTGAAAAA TTGGGTACTG AGAACAACTC TCTGAACTTC GCAACGGAAG 2707 .......... .......... .......... .......... .......... .......... 524 AGCAGGACGG ACCGTCGTAG GCACGACGGA CCGTCACATG GTCTTAAATA AAAATTGAGT 2767 .......... .......... .......... .......... .......... .......... 524 CTCTGAACTC TGTAACGACT TAGCAGGACG GACTATCGCA GGCACGACGG ACCGTCACAG 2827 .......... .......... .......... .......... .......... .......... 524 ACTGAGTAAC CCTGACTGGG TCGGATTTCT GTTAAAATTT TTTAAGGGGT GTTTTGGACT 2887 .......... .......... .......... .......... .......... .......... 524 ATTCCTGCTT ATGATTATAA GGTTAGTGGT TTAATGTTAA TAATTCAATT TCTTGGGGGT 2947 .......... .......... .......... .......... .......... .......... 524 TAAAGAAGAC AACCTTGGAA TAAGTAATGG GTTACTTTTA GCATCTTTTA TACTTAATTA 3007 .......... .......... .......... .......... .......... .......... 524 TATGATAAAT AGGGTAAAAC AAAGGGATTT TGAAAGAGGA GAAAATTAAA AAAAAAAAGA 3067 .......... .......... .......... .......... .......... .......... 524 AAAAGAAGGG AGAACGAGTG AGAGGGAGAG AAGAACGAAG AGGAAAGCAA AGAACTTGAG 3127 .......... .......... .......... .......... .......... .......... 524 GAGTAGCTTG CGTGATCACG AATTCTTCGC TGGAGGTAGG TTATGGTTTA TGCTATTTCA 3187 .......... .......... .......... .......... .......... .......... 524 TAGTAAACTC TTAATAGCGA ATGATATGTG TTGGGTAGTA TTGTAAAGTC TTCTATATGC 3247 .......... .......... .......... .......... .......... .......... 524 TTAATTGTGT GCTTGCATGA CGTGATTATA TAATTGTGAT AAAATAAGCA TGATGAGGCT 3307 .......... .......... .......... .......... .......... .......... 524 ATTGAATCTT AAACCTTAAG ACCTCTTTGT TAATGATGAT GCCTTGGTAT AAAAGAAGGC 3367 .......... .......... .......... .......... .......... .......... 524 TTGATGAACT GAAAGAATGA GAATTAGGGG ATCGGAGTGT CACGTTTCGA CACCAGGATA 3427 .......... .......... .......... .......... .......... .......... 524 GTATGGATCG GGTGTCACGT TCCGACACCA GGATAGTATA GATCGGGTGT CACGTTCCGA 3487 .......... .......... .......... .......... .......... .......... 524 CACCAGGATA GTATGGATCG GGTGTCACGT TTTGACACCA GGATAGTAAA GAGAATGAAT 3547 .......... .......... .......... .......... .......... .......... 524 CTTGAATTAT GCTAATATAC TCAGATTTAA TGAACCTGTT TCCCAAATGA GTATGGTGTG 3607 .......... .......... .......... .......... .......... .......... 524 GAGGCTTGAG TCCTCATAGA TGTGCTTGGG TTGTGCCCAA TGGTTATGGT ACTTGTTGTT 3667 .......... .......... .......... .......... .......... .......... 524 GTCACCTGTT TAGTATTGTA GTTGATTTTA TGTTATTATC TGATATATAT TGCTTTCTAT 3727 .......... .......... .......... .......... .......... .......... 524 TTTGAGTTGG CCGATGATAC CTACTCAGTA CTTGTGCCTT GTACTGACCC CTACTTGTAT 3787 .......... .......... .......... .......... .......... .......... 524 GTTTCTTTCT TTGTTATTTG TGGAGTGCAG CAAACGTGCC ACAACTTCGA CTCAACCGCA 3847 .......... .......... .......... .......... .......... .......... 524 ACTCTAGCCA GACTTCAGCA TAATCAGATT TCAGGTGAGC TATTGTTCCT AGCTCGGACT 3907 .......... .......... .......... .......... .......... .......... 524 GGATTCTTTC TTTCAGGTCT TGATGTCTTG AAGTTCGGAC ATGGACCATC TCTTTTATTT 3967 ||| ||| ||| | .......... ......ATCT TGA-GTCCGA TA........ .......... .......... 539 ATTTTAGCTT CTTAGATACT CTTAGATTTA GTAATTTGAG GATAGATGTT CTTGTGATGA 4027 .......... .......... .......... .......... .......... .......... 539 TGACTTCCAG ATTTTGGGGA TAATGATAAG TTTTGAGTTT TAGAAGTTAA TTATTGATTT 4087 .......... .......... .......... .......... .......... .......... 539 CGTTAATGAG TTTTAAGTTT TCCGTATTAT ATTCTGTTTA TTATGGTTGA AATGTTGGGG 4147 .......... .......... .......... .......... .......... .......... 539 TTTAGATTGG TTGGTTCGCT CACATAGGAG GGTAAGTGTG GGTGCCACTC ACGGCTCGTT 4207 .......... .......... .......... .......... .......... .......... 539 TTGGGTCGTG ACAAACTTGG TATCAGAGCA TTAGGTTCGT TGGTCTCATC ACACAAGAAC 4267 .......... .......... .......... .......... .......... .......... 539 AAGTCTAGTA GAGTCTTGAG GAATGGTAGG GGGACGCCTT TACTTTTCTT TGAGAGGCTA 4327 .......... .......... .......... .......... .......... .......... 539 TAAGACTTAA GGAAAATTCC ATTCTTTCTT TCTTTCGTGC TATTACTTGG ATCCAATTGG 4387 .......... .......... .......... .......... .......... .......... 539 TATCTAGGTG ATACAAATTG GTATCTGACC ATCTTCACTC TATTTCGCAG ATGGTTAGAA 4447 .......... .......... .......... .......... .......... .......... 539 CTAGAGCAAC AGCTGCGCCG ACACCAACAC CGGCAAAACA AGATGCGTCT GAACCAGCCA 4507 .......... .......... .......... .......... .......... .......... 539 CTGAGGCTGT AGCTCGAAGA GGAGCAGTGG CAAGAGGCCG CGGTAGAGGG TACTAGGGCG 4567 .......... .......... .......... .......... .......... .......... 539 GTGACTCCTC CACCGACTGA GGAAGTATTA AGAGAGGGTG AGGAAGGGGG AAATGAACAA 4627 .......... .......... .......... .......... .......... .......... 539 GTGCAGAACG AGGAATTACC ACCCCAACCT ACCCTAGAGA TGATTAATCA GGTTCTTGCT 4687 .......... .......... .......... .......... .......... .......... 539 TATCTTAGCG GGTTATCTGA TCAAGGCCAG ACACCTCCAG TGTTTTCTGC ACCAGTACCT 4747 .......... .......... .......... .......... .......... .......... 539 CAGGTTCCGG GAGTACAACA TACAGCTGCT GTGGCTCCCC GCATGGATGC CTCATTGGAA 4807 .......... .......... .......... .......... .......... .......... 539 ATAGGCACGT TTCCTCGGTT GACTACAGGG CCTATAATGA CAAGTGACCA GCACGAACTT 4867 .......... .......... .......... .......... .......... .......... 539 TTCAGTAAGT TCTTGAAGTT GAAACCTCCA GTTTTCAAGG GTGCTGAATC TGAGGATGCC 4927 .......... .......... .......... .......... .......... .......... 539 TATGACTTTC TGGTTGATTG TCATGAGTTG CTACATAAGA TGCGCATAGT GGAACGATTT 4987 .......... .......... .......... .......... .......... .......... 539 GGCGTTGAGT TTGTGACCTA TCAGTTTTAG GGGAACGCCA AAATGTGGTG GCGGTCATAT 5047 .......... .......... .......... .......... .......... .......... 539 GTTGAGTGTC AACCAGCACA GTCACCACCT ATGACTTGGG CATCATTCTC TAGCTTGTTT 5107 .......... .......... .......... .......... .......... .......... 539 ATGGAGAATT ATATACCTCG GACTTTGAGG GATAGGAGGA GAGATAAGTT CCTGAGCTTA 5167 .......... .......... .......... .......... .......... .......... 539 GAGCAAGGCA GGATGTCGGT TACTGCTTAT GAGGCTAAGT TTTGTGCACT ATCCAGGTAT 5227 .......... .......... .......... .......... .......... .......... 539 GCCACCCAGC TTTGCTTCAG TCCACAAGAG CGGATTCGTC GTTTCGTGAA AGGGTTGAGG 5287 .......... .......... .......... .......... .......... .......... 539 TCAGATTTGC GGATTTCAGC CTTACAGGTA GCTGCTGCAG CAAAATCCTT TCAGGAGGTG 5347 .......... .......... .......... .......... .......... .......... 539 GTAGATTTTG TAATAGAAGT GGAGGGAGTG AAGCCAGACG ACTTCACCAT GGCATCAATA 5407 .......... .......... .......... .......... .......... .......... 539 TCTAAGAAGT TTCATAAAGG AGGTGATTTT AATGGTTTTT AATCCAGAGG GCAGAGTTCA 5467 .......... .......... .......... .......... .......... .......... 539 GGAGGTTATC CAGCCCGACC TATTCAGTCT TCACTACAAG CTGTAGCTGG GGGTCCACCG 5527 .......... .......... .......... .......... .......... .......... 539 CAGACCGGTC AACATTTCTC TGAGTTTGGA GGTTATCCCC AGACTCTGTC GTTCTCATAG 5587 .......... .......... .......... .......... .......... .......... 539 AGACCTATGC TTTAATCAAG AGAGTGTTAT GGATGTGGAG AGACTGGACA TATTAAGAGG 5647 .......... .......... .......... .......... .......... .......... 539 TATTGTCCAA AACAGAGTTA CAGACCCCCA ATAGTCAGAG GTAGAGGTGG TCATGGGAGA 5707 .......... .......... .......... .......... .......... .......... 539 GGTCGCTATT CTGGAGGACG TGGTGGCCGA GGTAATGGTG GTCACCAAAA CGGCCGGGGT 5767 .......... .......... .......... .......... .......... .......... 539 GACAGGCAAA CTGGAACTTC TGTAGCTCAA CATTGTAGGG GCAACGGGCA GACCGGTGAT 5827 .......... .......... .......... .......... .......... .......... 539 AGGGCCCATT GTTATGCTTT CCCTGGGAGG TCTGAAGCGG AGACATCTGA TGCCGTCATC 5887 .......... .......... .......... .......... .......... .......... 539 ACAGGTAATC TTTTGGTTTG TGATTGCATG GCTTCTGTAT TGTTTGATCC TGGATCCACA 5947 .......... .......... .......... .......... .......... .......... 539 TTTTCATATG TATCTTCCTC ATTTGCTACT GGTCTTAATT TACATTATGA ATTGCTTGAC 6007 .......... .......... .......... .......... .......... .......... 539 ATACCTATTC GTGTTTCTAC TCCGGTGGGT GAGTCTGTGA TAGTTGAAAA AGTGTATAGG 6067 .......... .......... .......... .......... .......... .......... 539 TCTTGTCTTG TGACTTTTGT GGGGAACAAT ACTCATGTAG ACTTGGTTAT CTTAGAAATG 6127 .......... .......... .......... .......... .......... .......... 539 GTTGACTTCG ATGTAATTCT GGGTATGACT TGGCTGTCTC CAAATTTTGC AATCTTAGAT 6187 .......... .......... .......... .......... .......... .......... 539 TGTAATGCTA AAACTGTAAC GTCGGCCAAG CCTGGGACAG ATCCGTTAGT GTGGGAGGGT 6247 .......... .......... .......... .......... .......... .......... 539 GACTACACTT CCACTCCATT TCGTATTATC TCCTTTCTTC GTGCTAAGAG AATGGTTAGT 6307 .......... .......... .......... .......... .......... .......... 539 AAGGGTTGTT TAGCTTTCTT GACACACCTC TAGGATGATA CTACCCAAGT ACCTTCAATT 6367 | ||| ||||| .......... .......... .......... .......... .........T TCCTCCAATT 550 GAGTCGATTT CGATAGTCCG TGAGTTTCTA GATGTGTTTC CTGCAGACCT TCCTCGTATG 6427 ||||| || | ||||| | || ||| | || GAGTCAATCA CCATAGTGAG AGAATTT-TC GAA....... .......... .......... 582 CCACCGAATA GAGATATTTA TTTCTGTATT GATCTGGAGC CGGGTACTCG CCCCATTTCC 6487 .......... .......... .......... .......... .......... .......... 582 ATACCCCATT ATAGGATGGC TCCCGCTGAG TTAAGAGAGT TAAAGGCCCA ACTTCAAGAG 6547 .......... .......... .......... .......... .......... .......... 582 TTGTTAAGCA AAGGCTTTAT TAGACCAAGT GCATCCCCTT GGGGTGCTCC TATTTTATTT 6607 .......... .......... .......... .......... .......... .......... 582 GTGAAGAAGA AGGATGGAAG TTTTCGGATG TGCATAGACT ATAGGCAACT GAATAAGGTA 6667 .......... .......... .......... .......... .......... .......... 582 ATCATTAAGA ACAAGTATCC TCTTCCTCGC ATCGATGATT TGTTCGATCA GTTACAAGGT 6727 || |||||||| | || ||||||| |||||||||| |||||||||| .......... .....AAT-A TCTTCCTCAC ATTGATGATT TGTTCGATCA GTTACAAGGT 626 GCTTGTACCT TCTAAAAAAT TGATTTGAGA TCTGGTTATC ATCAATTAAA AATACGGGCA 6787 |||||||||| ||| |||||| || |||||| |||||||||| ||||||| || |||||| ||| GCTTGTACCT TCTCAAAAAT CGACTTGAGA TCTGGTTATC ATCAATTGAA AATACGAGCA 686 ACGGATGTGC CCAAGACTGC TTTTTGGACC ACGTATGGGC ATTATGAGTT CC 6839 | ||||||| |||||||||| |||| ||||| | ||||| || |||||||||| || GCAGATGTGC CCAAGACTGC TTTTCGGACC AGGTATGAGC ATTATGAGTT CC 738 hqPGS_C08HBa0294K15.1+_SGN-U345415- (6357 6400,6683 6839) ******************************************************************************** EST sequence 84 -strand 890 n (File: SGN-U335939-) 1 GGGGTCACCT CAGACGGTCA CACTCTCTGA GAGCCGATGC GGACCCCGAG ATGTTATGGT 61 GTGAGAGATG GACACTTAAG AGTCTGTCCC AAACAGAGTA CAGACCCCAA TGGCTAGAGA 121 AGAGGTGTAA TGGTAGAGTC GTATTTCTGA GGGCGTGTGN CCGAGTAAAT GCGTCACCAA 181 AACGGCAGAG GTGATGGGCA AATGGAGCCA CTACTACACA NCATGTAGGG GCACGGACCA 241 GACAAATAAT GGGGCCCTTG TTATGCTTTC CTGGGGAGGT CTGAAGCAGA GGCGTCTGAT 301 GCTGTTATCA CAGGTAATCT CTTGGTTTGT GATTGCATGG CATCTGTATT ATTTGACCCT 361 GGCTCCACGT TTTCATATGT ATCTTCATCA TTTGCTAATG GTCTAAAATT GCATTGTGAA 421 TTACTTGACA TGCCTATTCG TGTTTCTACT CCGGTGGGTG AGTCTGTGAT AGTTGAAAAG 481 GTACATAGGT CTTGTTTGGT GAATTTCGTG GGGAGCAACA CTTATCTAGA TTTGGTTACT 541 TTAGAAATGG GTGACTTTGA TGTAATTCTG GGTATGACTT GGCTTTCTCC CAATTTTGCG 601 ATCTTGGATT GTAATGCTAA AACGGTGACG TTAGCCAAGC CTGGGACAGA TCCGTTAGTG 661 TGGGAGGGTG ACTACACTTC CAATCCGGTG CGTATTATCT CCTTTCTTTG TGCTCAGAAG 721 ATGGTTAGTA AGGGTTGTCT ATCCTTCTTG GCACATCTCA AGGATGACAC TATCCAAGTA 781 CCCTCAATTG AATTAGTTTT GGTAGTTTGA GAATTTTTGG ATGTGTTCCC CTGCAGCCCG 841 GGGGATCCAC TAGTTCTAGA GCGGCCGCCA CCGCGGGGAG CTCCAGCTAT Predicted gene structure (within gDNA segment 1081 to 8436): Exon 1 5558 6402 ( 845 n); cDNA 3 824 ( 822 n); score: 0.820 MATCH C08HBa0294K15.1+ SGN-U335939- 0.820 845 0.949 C PGS_C08HBa0294K15.1+_SGN-U335939- (5558 6402) Alignment (genomic DNA sequence = upper lines): GGTTATCCCC AGACTCTGTC GTTCTCATAG AGACCTATGC TTTAATCAAG AGAGTGTTAT 5617 ||| | || | |||| | | |||| || || || |||| | | | ||| |||||| GGTCA-CCTC AGACGGTCAC ACTCTCTGAG AG-CCGATGC --GGACCCCG AGA-TGTTAT 57 GGATGTGGAG AGACTGGACA TATTAAGAGG TATTGTCCAA AACAGAGTTA CAGACCCCCA 5677 || ||| ||| ||| |||||| |||||| | | ||||| | ||||||| || |||| ||||| GG-TGT-GAG AGA-TGGACA -CTTAAGA-G T-CTGTCCCA AACAGAG-TA CAGA-CCCCA 109 ATAGTCAGAG GTAGAGGTGG TCATGGGAGA GGTCGCTATT CTGGAGGACG TGGTGGCCGA 5737 || | ||| | |||||| | | |||| ||| |||| |||| |||| || | ||| |||| ATGGCTAGA- GAAGAGGT-G TAATGGTAGA -GTCG-TATT TCTGAGGGCG T-GTGNCCGA 164 GGTAATGGTG GTCACCAAAA CGGCCGGGGT GACAGGCAAA CTGGAACTTC TGTAGCTCAA 5797 |||| | |||||||||| |||| | ||| || |||||| |||| | | | | || -GTAAATG-C GTCACCAAAA CGGCAGAGGT GATGGGCAAA -TGGAGCCAC TACTACACAN 221 CATTGTAGGG GCAACGGGCA GACCGGTGAT AGGGCCCATT GTTATGCTTT CCCTGGGAGG 5857 || ||||||| ||| | || ||| | || |||||| || |||||||||| || |||||| CA-TGTAGGG GCACGGACCA GACAAATAAT GGGGCCC-TT GTTATGCTTT CCTGGGGAGG 279 TCTGAAGCGG AGACATCTGA TGCCGTCATC ACAGGTAATC TTTTGGTTTG TGATTGCATG 5917 |||||||| | || | ||||| ||| || ||| |||||||||| | |||||||| |||||||||| TCTGAAGCAG AGGCGTCTGA TGCTGTTATC ACAGGTAATC TCTTGGTTTG TGATTGCATG 339 GCTTCTGTAT TGTTTGATCC TGGATCCACA TTTTCATATG TATCTTCCTC ATTTGCTACT 5977 || ||||||| | ||||| || ||| ||||| |||||||||| ||||||| || |||||||| | GCATCTGTAT TATTTGACCC TGGCTCCACG TTTTCATATG TATCTTCATC ATTTGCTAAT 399 GGTCTTAATT TACATTATGA ATTGCTTGAC ATACCTATTC GTGTTTCTAC TCCGGTGGGT 6037 ||||| || | | |||| ||| ||| |||||| || ||||||| |||||||||| |||||||||| GGTCTAAAAT TGCATTGTGA ATTACTTGAC ATGCCTATTC GTGTTTCTAC TCCGGTGGGT 459 GAGTCTGTGA TAGTTGAAAA AGTGTATAGG TCTTGTCTTG TGACTTTTGT GGGGAACAAT 6097 |||||||||| |||||||||| || ||||| |||||| | | ||| ||| || ||||| ||| GAGTCTGTGA TAGTTGAAAA GGTACATAGG TCTTGTTTGG TGAATTTCGT GGGGAGCAAC 519 ACTCATGTAG ACTTGGTTAT CTTAGAAATG GTTGACTTCG ATGTAATTCT GGGTATGACT 6157 ||| || ||| | ||||||| ||||||||| | |||||| | |||||||||| |||||||||| ACTTATCTAG ATTTGGTTAC TTTAGAAATG GGTGACTTTG ATGTAATTCT GGGTATGACT 579 TGGCTGTCTC CAAATTTTGC AATCTTAGAT TGTAATGCTA AAACTGTAAC GTCGGCCAAG 6217 ||||| |||| | |||||||| ||||| ||| |||||||||| |||| || || || |||||| TGGCTTTCTC CCAATTTTGC GATCTTGGAT TGTAATGCTA AAACGGTGAC GTTAGCCAAG 639 CCTGGGACAG ATCCGTTAGT GTGGGAGGGT GACTACACTT CCACTCCATT TCGTATTATC 6277 |||||||||| |||||||||| |||||||||| |||||||||| ||| ||| | ||||||||| CCTGGGACAG ATCCGTTAGT GTGGGAGGGT GACTACACTT CCAATCCGGT GCGTATTATC 699 TCCTTTCTTC GTGCTAAGAG AATGGTTAGT AAGGGTTGTT TAGCTTTCTT GACACACCTC 6337 ||||||||| ||||| ||| ||||||||| ||||||||| || | ||||| | |||| ||| TCCTTTCTTT GTGCTCAGAA GATGGTTAGT AAGGGTTGTC TATCCTTCTT GGCACATCTC 759 TAGGATGATA CTACCCAAGT ACCTTCAATT GAGTCGATTT CGATAGTCCG TGAGTTTCTA 6397 ||||||| | ||| |||||| ||| |||||| || | ||| | |||| | || ||| | AAGGATGACA CTATCCAAGT ACCCTCAATT GAATTAGTTT TGGTAGTTTG AGAATTTTTG 819 GATGT 6402 ||||| GATGT 824 hqPGS_C08HBa0294K15.1+_SGN-U335939- (5558 6402) ******************************************************************************** EST sequence 78 -strand 950 n (File: SGN-U335935-) 1 GGGGCCCCAA TGTACGCTTT CCCTTGGGAA ATCTGAAGCG AGGGCGTTCT GATGCTGTTA 61 TCACAGGTAT TCTTTTGGTT TGTGATGACA TGGCATCTGT ATTATTTGAC CCTGGCTCCA 121 CGTTTTCATA TGTATCTTCA TCATTTGCTA ATGGTATAAA ATGCCATGTG AATTTACTNG 181 ACATGCNTAT TCGTGTTTCT ACTCCGGTGG GTGAGTCTGT GGTAGTTGAA AAGGTACATA 241 GTTCTGTTTT GTNGAATTTC GTGGGGAGCA ACACTTATGT AGATTTGGTT TTTTAGAAAT 301 GGGTGACATT GATGTAATTC TGGGTATGAC TTGGCTTTCT CCAAATTTTG CGATCTTGGA 361 TTGTAATGCT AAAACGGTGA CGTTAGCCAA GCCTGGGACA GATCCGTTAG TGTGGGAGGG 421 TGACTACACT TCCAATCTGG TGCGTATCAT ATCCTTTCTT CGTGCTAAGA AAATGGTTAG 481 TAAAGGGTGT TCAGCTTTCT TGGCACATCT CAAGGATGAC ACTACTCAAG TACCCTCAAT 541 TGAGTCGGTT TCGGTAGTCC GCGAGTTTTT GGACGTGTTT CCTGCAGATC TTCCTGGTAT 601 GCCACCAGAT AGGGATATTG ACTTCTGTAT CGATCTTGAA CCAGGCACAC GCCCCATTTC 661 TATACCCCCT TATAGAATGG CTCCCGCCGA ATTAAGAGAG TTAAAGGCTC AACTTCAAGA 721 GTTGTTGAGC AAGGTCTTCA TTAGACCAAG TGCATCTCCT TGGGGTGCTC CAGTTTTATT 781 TGTGAAGAAG AAGGATGGAA GTTTTAGAAT GTGCATAGAC TACAGACAAC TGAACAAGGT 841 AACTATTAAG AACAAGTATC CTCTTCCTCG CATTGATCCT CGTGCCGAAT TCCTGCAGCC 901 CGGGGGATCC ACTAGTTCTA GAGCGGCCGC CACCGCGGTG AGCTCCAGCT Predicted gene structure (within gDNA segment 3533 to 8681): Exon 1 5829 6699 ( 871 n); cDNA 3 873 ( 871 n); score: 0.858 MATCH C08HBa0294K15.1+ SGN-U335935- 0.858 871 0.917 C PGS_C08HBa0294K15.1+_SGN-U335935- (5829 6699) Alignment (genomic DNA sequence = upper lines): GGGCCCATTG TTATGCTTTC CCT-GGGAGG TCTGAAGCGG AGAC-ATCTG ATGCCGTCAT 5886 || |||| || || |||||| ||| |||| ||||||||| | | |||| |||| || || GGCCCCAATG -TACGCTTTC CCTTGGGAAA TCTGAAGCGA GGGCGTTCTG ATGCTGTTAT 61 CACAGGTAAT CTTTTGGTTT GTGATTGCAT GGCTTCTGTA TTGTTTGATC CTGGATCCAC 5946 |||||||| | |||||||||| ||||| ||| ||| |||||| || ||||| | |||| ||||| CACAGGTATT CTTTTGGTTT GTGATGACAT GGCATCTGTA TTATTTGACC CTGGCTCCAC 121 ATTTTCATAT GTATCTTCCT CATTTGCTAC TGGTCTTAAT TTACATTATG AA-TTGCTTG 6005 ||||||||| |||||||| | ||||||||| |||| | || | || | || || || || | GTTTTCATAT GTATCTTCAT CATTTGCTAA TGGTATAAAA TGCCA-TGTG AATTTACTNG 180 ACATACCTAT TCGTGTTTCT ACTCCGGTGG GTGAGTCTGT GATAGTTGAA AAAGTGTATA 6065 |||| | ||| |||||||||| |||||||||| |||||||||| | |||||||| || || ||| ACATGCNTAT TCGTGTTTCT ACTCCGGTGG GTGAGTCTGT GGTAGTTGAA AAGGTACATA 240 GGTCTTGTCT TGT-GACTTT TGTGGGGAAC AATACTCATG TAGACTTGGT TATCTTAGAA 6124 | || ||| | ||| || ||| ||||||| | || ||| ||| |||| ||||| | | |||||| GTTC-TGTTT TGTNGAATTT CGTGGGGAGC AACACTTATG TAGATTTGGT T-TTTTAGAA 298 ATGGTTGACT TCGATGTAAT TCTGGGTATG ACTTGGCTGT CTCCAAATTT TGCAATCTTA 6184 |||| |||| | |||||||| |||||||||| |||||||| | |||||||||| ||| ||||| ATGGGTGACA TTGATGTAAT TCTGGGTATG ACTTGGCTTT CTCCAAATTT TGCGATCTTG 358 GATTGTAATG CTAAAACTGT AACGTCGGCC AAGCCTGGGA CAGATCCGTT AGTGTGGGAG 6244 |||||||||| ||||||| || |||| ||| |||||||||| |||||||||| |||||||||| GATTGTAATG CTAAAACGGT GACGTTAGCC AAGCCTGGGA CAGATCCGTT AGTGTGGGAG 418 GGTGACTACA CTTCCACTCC ATTTCGTATT ATCTCCTTTC TTCGTGCTAA GAGAATGGTT 6304 |||||||||| |||||| || | ||||| || ||||||| |||||||||| || ||||||| GGTGACTACA CTTCCAATCT GGTGCGTATC ATATCCTTTC TTCGTGCTAA GAAAATGGTT 478 AGTAAGGGTT GTTTAGCTTT CTTGACACAC CTCTAGGATG ATACTACCCA AGTACCTTCA 6364 ||||| || | ||| |||||| |||| |||| ||| |||||| | ||||| || |||||| ||| AGTAAAGGGT GTTCAGCTTT CTTGGCACAT CTCAAGGATG ACACTACTCA AGTACCCTCA 538 ATTGAGTCGA TTTCGATAGT CCGTGAGTTT CTAGATGTGT TTCCTGCAGA CCTTCCTCGT 6424 ||||||||| ||||| |||| ||| |||||| | || |||| |||||||||| |||||| || ATTGAGTCGG TTTCGGTAGT CCGCGAGTTT TTGGACGTGT TTCCTGCAGA TCTTCCTGGT 598 ATGCCACCGA ATAGAGATAT TTATTTCTGT ATTGATCTGG AGCCGGGTAC TCGCCCCATT 6484 |||||||| |||| ||||| | | |||||| || ||||| | | || || || ||||||||| ATGCCACCAG ATAGGGATAT TGACTTCTGT ATCGATCTTG AACCAGGCAC ACGCCCCATT 658 TCCATACCCC ATTATAGGAT GGCTCCCGCT GAGTTAAGAG AGTTAAAGGC CCAACTTCAA 6544 || ||||||| |||||| || ||||||||| || ||||||| |||||||||| ||||||||| TCTATACCCC CTTATAGAAT GGCTCCCGCC GAATTAAGAG AGTTAAAGGC TCAACTTCAA 718 GAGTTGTTAA GCAAAGGCTT TATTAGACCA AGTGCATCCC CTTGGGGTGC TCCTATTTTA 6604 |||||||| | |||| | ||| ||||||||| |||||||| | |||||||||| ||| ||||| GAGTTGTTGA GCAAGGTCTT CATTAGACCA AGTGCATCTC CTTGGGGTGC TCCAGTTTTA 778 TTTGTGAAGA AGAAGGATGG AAGTTTTCGG ATGTGCATAG ACTATAGGCA ACTGAATAAG 6664 |||||||||| |||||||||| ||||||| | |||||||||| |||| || || |||||| ||| TTTGTGAAGA AGAAGGATGG AAGTTTTAGA ATGTGCATAG ACTACAGACA ACTGAACAAG 838 GTAATCATTA AGAACAAGTA TCCTCTTCCT CGCAT 6699 |||| |||| |||||||||| |||||||||| ||||| GTAACTATTA AGAACAAGTA TCCTCTTCCT CGCAT 873 hqPGS_C08HBa0294K15.1+_SGN-U335935- (5829 6699) ******************************************************************************** EST sequence 95 -strand 757 n (File: SGN-U317065-) 1 GATGCTGTCA TCACAGGTAA TCTTTCGATT GTGATTGCAT GGCTTCTGTA TTGTTGATCC 61 TGGGATCCAC GTTTTCTANT GTATCTTCCT CATTTGCTAA CGGTCTAAAT TTACATTGTG 121 AATTACTTGA TATGCCTATT CGTGTTTCTA CTCCGGTGGG TGAGTCTGTG GTAGTTGAAA 181 AGGTATATAG GTCTTGTTTG GTGAACTTTG TGGGGAGCAA CACTTATGTA GATTTGGTTA 241 TCTTAGAAAT GGTTGATTTT GATGTAATTC TGGGTATGAC TTGGCTTTCT CCGCAATTTG 301 CGATCTTGGA TTGTAATGCT AAAACGGTGA CATTAGCCAA GCCTGGGACA GATCCGTTAG 361 TGTGGGAGGG TGACTACACT TCCAATCCGG TGTGCATCAT CTCCTTTCTT CGTGCTAAGA 421 AAATGGTTAG TAAAGGGTGT TTAGCTTTCT TGGCACATCT CAAGGATGAC ACTACCCAAG 481 TACCTTCGAT TGAGTCGGTT TTTATAGTCT GTGAGTTTTT GGATGTGTTC CCTGCAGATC 541 TTCCTGGTAT GCCACCAGAT AGGGATATTG ACTTCTGTAT CGATCTTGAA CCGGGCACAC 601 GCCCCATTTC TATACCCCCT TATAGAATGG CTCCCGTAGA GTTAAGAGAG TTAAAGGCCC 661 AACTTCAAGA GTTGTTGAGC AAAGGTTTCA TTAGACCAAG TGCATCTCCT TGGGGTGCTC 721 CGATTTTGTT TGTGAAGAAG AAGGATGGGA GTTTCCG Predicted gene structure (within gDNA segment 4061 to 7692): Exon 1 5876 6633 ( 758 n); cDNA 1 757 ( 757 n); score: 0.882 MATCH C08HBa0294K15.1+ SGN-U317065- 0.882 758 1.001 C PGS_C08HBa0294K15.1+_SGN-U317065- (5876 6633) Alignment (genomic DNA sequence = upper lines): GATGCCGTCA TCACAGGTAA TCTTTTGGTT TGTGATTGCA TGGCTTCTGT ATTGTTTGAT 5935 ||||| |||| |||||||||| || ||| | | |||||||||| |||||||||| |||| ||||| GATGCTGTCA TCACAGGTAA TC-TTTCGAT TGTGATTGCA TGGCTTCTGT ATTG-TTGAT 58 CCT-GGATCC ACATTTTCAT ATGTATCTTC CTCATTTGCT ACTGGTCTTA ATTTACATTA 5994 ||| |||||| || ||||| ||||||||| |||||||||| | ||||| | ||||||||| CCTGGGATCC ACGTTTTCTA NTGTATCTTC CTCATTTGCT AACGGTCTAA ATTTACATTG 118 TGAATTGCTT GACATACCTA TTCGTGTTTC TACTCCGGTG GGTGAGTCTG TGATAGTTGA 6054 |||||| ||| || || |||| |||||||||| |||||||||| |||||||||| || ||||||| TGAATTACTT GATATGCCTA TTCGTGTTTC TACTCCGGTG GGTGAGTCTG TGGTAGTTGA 178 AAAAGTGTAT AGGTCTTGTC TTGTGACTTT TGTGGGGAAC AATACTCATG TAGACTTGGT 6114 ||| || ||| ||||||||| | |||| || |||||||| | || ||| ||| |||| ||||| AAAGGTATAT AGGTCTTGTT TGGTGAACTT TGTGGGGAGC AACACTTATG TAGATTTGGT 238 TATCTTAGAA ATGGTTGACT TCGATGTAAT TCTGGGTATG ACTTGGCTGT CTCCAAATTT 6174 |||||||||| |||||||| | | |||||||| |||||||||| |||||||| | |||| | || TATCTTAGAA ATGGTTGATT TTGATGTAAT TCTGGGTATG ACTTGGCTTT CTCCGCAATT 298 TGCAATCTTA GATTGTAATG CTAAAACTGT AACGTCGGCC AAGCCTGGGA CAGATCCGTT 6234 ||| ||||| |||||||||| ||||||| || || | ||| |||||||||| |||||||||| TGCGATCTTG GATTGTAATG CTAAAACGGT GACATTAGCC AAGCCTGGGA CAGATCCGTT 358 AGTGTGGGAG GGTGACTACA CTTCCACTCC ATTTCGTATT ATCTCCTTTC TTCGTGCTAA 6294 |||||||||| |||||||||| |||||| ||| | | || |||||||||| |||||||||| AGTGTGGGAG GGTGACTACA CTTCCAATCC GGTGTGCATC ATCTCCTTTC TTCGTGCTAA 418 GAGAATGGTT AGTAAGGGTT GTTTAGCTTT CTTGACACAC CTCTAGGATG ATACTACCCA 6354 || ||||||| ||||| || | |||||||||| |||| |||| ||| |||||| | |||||||| GAAAATGGTT AGTAAAGGGT GTTTAGCTTT CTTGGCACAT CTCAAGGATG ACACTACCCA 478 AGTACCTTCA ATTGAGTCGA TTTCGATAGT CCGTGAGTTT CTAGATGTGT TTCCTGCAGA 6414 ||||||||| ||||||||| ||| ||||| | |||||||| | ||||||| | |||||||| AGTACCTTCG ATTGAGTCGG TTTTTATAGT CTGTGAGTTT TTGGATGTGT TCCCTGCAGA 538 CCTTCCTCGT ATGCCACCGA ATAGAGATAT TTATTTCTGT ATTGATCTGG AGCCGGGTAC 6474 |||||| || |||||||| |||| ||||| | | |||||| || ||||| | | ||||| || TCTTCCTGGT ATGCCACCAG ATAGGGATAT TGACTTCTGT ATCGATCTTG AACCGGGCAC 598 TCGCCCCATT TCCATACCCC ATTATAGGAT GGCTCCCGCT GAGTTAAGAG AGTTAAAGGC 6534 ||||||||| || ||||||| |||||| || |||||||| |||||||||| |||||||||| ACGCCCCATT TCTATACCCC CTTATAGAAT GGCTCCCGTA GAGTTAAGAG AGTTAAAGGC 658 CCAACTTCAA GAGTTGTTAA GCAAAGGCTT TATTAGACCA AGTGCATCCC CTTGGGGTGC 6594 |||||||||| |||||||| | ||||||| || ||||||||| |||||||| | |||||||||| CCAACTTCAA GAGTTGTTGA GCAAAGGTTT CATTAGACCA AGTGCATCTC CTTGGGGTGC 718 TCCTATTTTA TTTGTGAAGA AGAAGGATGG AAGTTTTCG 6633 ||| ||||| |||||||||| |||||||||| ||||| || TCCGATTTTG TTTGTGAAGA AGAAGGATGG GAGTTTCCG 757 hqPGS_C08HBa0294K15.1+_SGN-U317065- (5876 6633) ******************************************************************************** EST sequence 80 -strand 878 n (File: SGN-U335937-) 1 CTNCGCCCCA AAAAACTGAA TTAGGTGATG TCCACGTAGT GGCCCTCGCC TAGATAGACG 61 TTTTCGCCCT TGGACGTTGG AGTCCACGTT CTTAAATAGT GACTTCTGTT CCAAACTGGA 121 ACACCACTCA ACCCTATCTC GGTCTATTCT TTTGATTTAT AAGGGATTTT GCCGATTTCG 181 GCCTATTGGT TAAAAAATGA GCTGATTTAA CAAAAATTTA ACGCGAATTT TAACAAAATA 241 TTAACGCTTA CAATTTGCCA TTCGCCATTC AGGCTGCGCA ACTGTTGGGA AGGGCGATCG 301 GTGCGGGCCT CTTCGCTATT ACGCCAGCTG GCGAAAGGGG GATGTGCTGC AAGGCGATTA 361 AGTTGGGTAA CGCCAGGGTT TTCCCAGTCA CGACGTTGTA AAACGACGGC CAGTGAATTG 421 TAATACGACT CACTATAGGG CGAATTGGGT ACCGGGCCCC CCCTCGAGTT TTTTTTTTTT 481 TTTGTGATTG CATGGCTTTT GTATTATTTG ACCCTGGATC CACATTTTCA TATGTATCTT 541 CCTCATTTGC TACTGGTCTT AAATTAAATT ATGAATTGCT TGACATGCCT ATTCGTGTTT 601 CTACTCCGGT GGGTGAGTCT GTGATAGTTG AAAAAGTATA TAGGTCTGGT CTGGTGACTT 661 TTGTGGGGAG CAATACTTAT GTAGACTTGG TTATCTTAGA AATGGTTGAT TTTGATGTAA 721 TTCTGGGTAT GACTTGGCTT TCTCCAAATT TTGCAATCTT GGATTGTAAT GCTAAAACTG 781 TGACGTTAGC CAAGCCTGGG ACAGATCCCC TCGTGCCGAA TTCCTGCAGC CCGGGGGATC 841 CACTAGTTCT AGAGCGGCCG CCACCGCGGG GAGCTCCA Predicted gene structure (within gDNA segment 494 to 7531): Exon 1 5898 6231 ( 334 n); cDNA 475 808 ( 334 n); score: 0.940 MATCH C08HBa0294K15.1+ SGN-U335937- 0.940 334 0.380 C PGS_C08HBa0294K15.1+_SGN-U335937- (5898 6231) Alignment (genomic DNA sequence = upper lines): TTTTGGTTTG TGATTGCATG GCTTCTGTAT TGTTTGATCC TGGATCCACA TTTTCATATG 5957 |||| |||| |||||||||| |||| ||||| | ||||| || |||||||||| |||||||||| TTTTTTTTTG TGATTGCATG GCTTTTGTAT TATTTGACCC TGGATCCACA TTTTCATATG 534 TATCTTCCTC ATTTGCTACT GGTCTTAATT TACATTATGA ATTGCTTGAC ATACCTATTC 6017 |||||||||| |||||||||| |||||||| | || ||||||| |||||||||| || ||||||| TATCTTCCTC ATTTGCTACT GGTCTTAAAT TAAATTATGA ATTGCTTGAC ATGCCTATTC 594 GTGTTTCTAC TCCGGTGGGT GAGTCTGTGA TAGTTGAAAA AGTGTATAGG TCTTGTCTTG 6077 |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| ||| |||| | GTGTTTCTAC TCCGGTGGGT GAGTCTGTGA TAGTTGAAAA AGTATATAGG TCTGGTCTGG 654 TGACTTTTGT GGGGAACAAT ACTCATGTAG ACTTGGTTAT CTTAGAAATG GTTGACTTCG 6137 |||||||||| ||||| |||| ||| |||||| |||||||||| |||||||||| ||||| || | TGACTTTTGT GGGGAGCAAT ACTTATGTAG ACTTGGTTAT CTTAGAAATG GTTGATTTTG 714 ATGTAATTCT GGGTATGACT TGGCTGTCTC CAAATTTTGC AATCTTAGAT TGTAATGCTA 6197 |||||||||| |||||||||| ||||| |||| |||||||||| |||||| ||| |||||||||| ATGTAATTCT GGGTATGACT TGGCTTTCTC CAAATTTTGC AATCTTGGAT TGTAATGCTA 774 AAACTGTAAC GTCGGCCAAG CCTGGGACAG ATCC 6231 ||||||| || || |||||| |||||||||| |||| AAACTGTGAC GTTAGCCAAG CCTGGGACAG ATCC 808 hqPGS_C08HBa0294K15.1+_SGN-U335937- (5898 6231) ******************************************************************************** EST sequence 46 +strand 866 n (File: SGN-U335936+) 1 TAGAGCTGGA GCTCCCCGCG GTGGCGGCCG TTAATTCCTA GTGGATCCCC CGGGCTGCAT 61 TACTTCGGCA CGAGGATTTG ATCCTGCCTC CACATTTTCA TATGTATCTT CCTCATTTGC 121 TACTGTTCTT AATTTACATA GTGAATCGCT TGACATACCT ATTCGTGTTC TACTCCGGTG 181 GGTGAGTCTG TGATTGTTGA AAAGGTGTAT AGGTCTTGTC TTGTGACATT TGTGGGAGCA 241 ATACTCATGT AGACTTGGTT ATCCTATAAA TGGTTGACTT CGATGTAATT CTGGGTATGA 301 CTTGGCTGTC TCCAAATTTT GCAATCTTGG ATTGTAATGC TAAAACTGTA ACGTTGGCCA 361 AGCCTGAGAT AGATGCGTTA GTGTGGGAGG GTGACTACAC TTCCACTCCA GTTCGTATCA 421 TCTCCTTTCT TTGTGCTAAG AGAATGGTTA GTAAAGGGTG TTTAGCTTTC TTGGCACACC 481 TCAGGGATGA TACTACCCAA GTACCTTCAA TTGAGTCAGT TTCGATAGTC CGTGAGTTTC 541 TGGATGTGTT TCCTGCAGAC CTTCCTGGTA TGCCACCGGA TAGGGATATT GACTTTTGCA 601 TTGATCTGGA GCCGGGTGAT CACCCCATTT CCATACCCCC TTATAGAATG GCTCCCGCTG 661 AGTTGGGGGA GTTAAAGGCC CAACTTCAAG AGTTGTTANG TAAGGGCTTC ATTANGCCAA 721 GTGCATCCCC TTGGGGTGCT CCTGTTTTAT TGTGAAGAAG AAGGATAGAA AGTTTTGATG 781 TGCATAGACT ATANGCAAAT GAATAANGGT ACTATTANGA AACAGTATCC TCTTCCTCGC 841 ATCGATGATT TGTTCGATCA GTTACA Predicted gene structure (within gDNA segment 4462 to 7333): Exon 1 5930 6723 ( 794 n); cDNA 77 866 ( 790 n); score: 0.914 MATCH C08HBa0294K15.1+ SGN-U335936+ 0.914 794 0.917 C PGS_C08HBa0294K15.1+_SGN-U335936+ (5930 6723) Alignment (genomic DNA sequence = upper lines): TTTGATCCTG GATCCACATT TTCATATGTA TCTTCCTCAT TTGCTACTGG TCTTAATTTA 5989 |||||||||| |||||||| |||||||||| |||||||||| ||||||||| |||||||||| TTTGATCCTG CCTCCACATT TTCATATGTA TCTTCCTCAT TTGCTACTGT TCTTAATTTA 136 CATTATGAAT TGCTTGACAT ACCTATTCGT GTTTCTACTC CGGTGGGTGA GTCTGTGATA 6049 ||| ||||| ||||||||| |||||||||| | |||||||| |||||||||| ||||||||| CATAGTGAAT CGCTTGACAT ACCTATTCGT G-TTCTACTC CGGTGGGTGA GTCTGTGATT 195 GTTGAAAAAG TGTATAGGTC TTGTCTTGTG ACTTTTGTGG GGAACAATAC TCATGTAGAC 6109 |||||||| | |||||||||| |||||||||| || ||||| | ||| |||||| |||||||||| GTTGAAAAGG TGTATAGGTC TTGTCTTGTG ACATTTGT-G GGAGCAATAC TCATGTAGAC 254 TTGGTTATCT TAGAAATGGT TGACTTCGAT GTAATTCTGG GTATGACTTG GCTGTCTCCA 6169 ||||||||| || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGTTATCC TATAAATGGT TGACTTCGAT GTAATTCTGG GTATGACTTG GCTGTCTCCA 314 AATTTTGCAA TCTTAGATTG TAATGCTAAA ACTGTAACGT CGGCCAAGCC TGGGACAGAT 6229 |||||||||| |||| ||||| |||||||||| |||||||||| ||||||||| || || |||| AATTTTGCAA TCTTGGATTG TAATGCTAAA ACTGTAACGT TGGCCAAGCC TGAGATAGAT 374 CCGTTAGTGT GGGAGGGTGA CTACACTTCC ACTCCATTTC GTATTATCTC CTTTCTTCGT 6289 ||||||||| |||||||||| |||||||||| |||||| ||| |||| ||||| ||||||| || GCGTTAGTGT GGGAGGGTGA CTACACTTCC ACTCCAGTTC GTATCATCTC CTTTCTTTGT 434 GCTAAGAGAA TGGTTAGTAA GGGTTGTTTA GCTTTCTTGA CACACCTCTA GGATGATACT 6349 |||||||||| |||||||||| || |||||| ||||||||| |||||||| |||||||||| GCTAAGAGAA TGGTTAGTAA AGGGTGTTTA GCTTTCTTGG CACACCTCAG GGATGATACT 494 ACCCAAGTAC CTTCAATTGA GTCGATTTCG ATAGTCCGTG AGTTTCTAGA TGTGTTTCCT 6409 |||||||||| |||||||||| ||| ||||| |||||||||| ||||||| || |||||||||| ACCCAAGTAC CTTCAATTGA GTCAGTTTCG ATAGTCCGTG AGTTTCTGGA TGTGTTTCCT 554 GCAGACCTTC CTCGTATGCC ACCGAATAGA GATATTTATT TCTGTATTGA TCTGGAGCCG 6469 |||||||||| || ||||||| |||| |||| |||||| | | | || ||||| |||||||||| GCAGACCTTC CTGGTATGCC ACCGGATAGG GATATTGACT TTTGCATTGA TCTGGAGCCG 614 GGTACTCGCC CCATTTCCAT ACCCCATTAT AGGATGGCTC CCGCTGAGTT AAGAGAGTTA 6529 ||| || || |||||||||| ||||| |||| || ||||||| |||||||||| | |||||| GGTGATCACC CCATTTCCAT ACCCCCTTAT AGAATGGCTC CCGCTGAGTT GGGGGAGTTA 674 AAGGCCCAAC TTCAAGAGTT GTTAAGCAAA GGCTTTATTA GACCAAGTGC ATCCCCTTGG 6589 |||||||||| |||||||||| |||| | || ||||| |||| |||||||| |||||||||| AAGGCCCAAC TTCAAGAGTT GTTANGTAAG GGCTTCATTA NGCCAAGTGC ATCCCCTTGG 734 GGTGCTCCTA TTTTATTTGT GAAGAAGAAG GATGGAAGTT TTCGGATGTG CATAGACTAT 6649 ||||||||| ||||| |||| |||||||||| ||| ||| | || |||||| |||||||||| GGTGCTCCTG TTTTA-TTGT GAAGAAGAAG GATAGAAAGT TT-TGATGTG CATAGACTAT 792 AGGCAACTGA ATAAGGTAAT CATTAAGAAC AAGTATCCTC TTCCTCGCAT CGATGATTTG 6709 | |||| ||| |||| | | |||| ||| ||||||||| |||||||||| |||||||||| ANGCAAATGA ATAANGGTAC TATTANGAAA CAGTATCCTC TTCCTCGCAT CGATGATTTG 852 TTCGATCAGT TACA 6723 |||||||||| |||| TTCGATCAGT TACA 866 hqPGS_C08HBa0294K15.1+_SGN-U335936+ (5930 6723) ******************************************************************************** EST sequence 91 -strand 712 n (File: SGN-U326740-) 1 CCGCAGAGTT AAGAGAGTTA AAAGACCACT TCAAAGAGTT GTGAGCAAAG GCTTCATTAG 61 ACCAACTGCA TCTCCTTGGG GTGCTCCGGT TTTGTTTGTA AAGAAGAAGG ATTGGAGTTT 121 TCGGATGTGC ATAGGCTACC GGCAGTTGAA CAAGGTAACC ATAAAGAACA AGTATCCTCT 181 TCCTCGCATT AATGACTTGT TCGATCAGTT ACAAGGTGCT TGTGTCTTTT CTAAGATTGA 241 CTTGAGATCC GGTTATCATC AATTGAAAAT ACGGGCAACG GATGTGCCAA AGACTGCTTT 301 TAGAACCAGG TATGGGCATT ACAAATTTGT AGTGATGTCT TTTGGTCTTA TGAATGCCCC 361 TGCTGCGTTT ATGAGTTTAA TAAAAGGGAT TTTTAAGCCA TATTTGGATC TCTTTGTGAT 421 CGTATTTATT GATGATATAC TGATATACTC TAAAAGTAAG GAGGAACATG AAGAGCATTT 481 GAGAATGGTA TTGGAAATGT TGAGGGAGAA AAAGTTTTAT GCCAAGTTCT CTAAGTGTGA 541 GTTTTGGCTA GATGTAGTGT CCTTCTTGGG GAACGTGGTT TCTAAGGATG GAGTGATGGT 601 GGATCCTTCT AAGATTGAGA CAGTGAAGAA TTGGGTAAGA CCTACTAATG TGTCAGAAAT 661 AAGGAGCTTT GTTGGGTTAG CTAGCTACTA CCGCCGATTT GTCAAGGGAT TC Predicted gene structure (within gDNA segment 4434 to 7831): Exon 1 6510 7221 ( 712 n); cDNA 1 711 ( 711 n); score: 0.868 MATCH C08HBa0294K15.1+ SGN-U326740- 0.868 712 1.000 C PGS_C08HBa0294K15.1+_SGN-U326740- (6510 7221) Alignment (genomic DNA sequence = upper lines): CCGCTGAGTT AAGAGAGTTA AAGGCCCAAC TTCAAGAGTT GTTAAGCAAA GGCTTTATTA 6569 |||| ||||| |||||||||| || | ||| | ||||||| | | |||||| ||||| |||| CCGCAGAGTT AAGAGAGTTA AAAGACCACT TCAAAGAGTT G-TGAGCAAA GGCTTCATTA 59 GACCAAGTGC ATCCCCTTGG GGTGCTCCTA TTTTATTTGT GAAGAAGAAG GATGGAAGTT 6629 |||||| ||| ||| |||||| |||||||| |||| ||||| ||||||||| ||| | |||| GACCAACTGC ATCTCCTTGG GGTGCTCCGG TTTTGTTTGT AAAGAAGAAG GATTGGAGTT 119 TTCGGATGTG CATAGACTAT AGGCAACTGA ATAAGGTAAT CATTAAGAAC AAGTATCCTC 6689 |||||||||| ||||| ||| |||| ||| | ||||||| ||| |||||| |||||||||| TTCGGATGTG CATAGGCTAC CGGCAGTTGA ACAAGGTAAC CATAAAGAAC AAGTATCCTC 179 TTCCTCGCAT CGATGATTTG TTCGATCAGT TACAAGGTGC TTGTACCTTC TAAAAAATTG 6749 |||||||||| |||| ||| |||||||||| |||||||||| |||| ||| | || |||| TTCCTCGCAT TAATGACTTG TTCGATCAGT TACAAGGTGC TTGTGTCTTT TCTAAGATTG 239 ATTTGAGATC TGGTTATCAT CAATTAAAAA TACGGGCAAC GGATGTGCCC AAGACTGCTT 6809 | |||||||| ||||||||| ||||| |||| |||||||||| ||||||||| |||||||||| ACTTGAGATC CGGTTATCAT CAATTGAAAA TACGGGCAAC GGATGTGCCA AAGACTGCTT 299 TTTGGACCAC GTATGGGCAT TATGAGTTCC TAGTAATGTC TTTTGGGCTT ACGAATTCCC 6869 || | |||| |||||||||| || | || |||| ||||| |||||| ||| | |||| ||| TTAGAACCAG GTATGGGCAT TACAAATTTG TAGTGATGTC TTTTGGTCTT ATGAATGCCC 359 CTGCTGCTTT CATGAGCTTA ATGAGCGGGA TTTTTAAGCC ATATCTGGAT CTCTTCGTCA 6929 ||||||| || ||||| ||| || | |||| |||||||||| |||| ||||| ||||| || | CTGCTGCGTT TATGAGTTTA ATAAAAGGGA TTTTTAAGCC ATATTTGGAT CTCTTTGTGA 419 TTGTATTCAT CGATGACATA CTGGTATACT CAAAGAGCAA GAAAGAACAT GAGGAGCACT 6989 | ||||| || ||||| ||| ||| |||||| | || || || | | |||||| || ||||| | TCGTATTTAT TGATGATATA CTGATATACT CTAAAAGTAA GGAGGAACAT GAAGAGCATT 479 TGAGAATGGT ATTGGAAATG TTGAGGGAGA AAGAGCTTTA TGCCAAATTC TCTAAGTGTG 7049 |||||||||| |||||||||| |||||||||| || || |||| |||||| ||| |||||||||| TGAGAATGGT ATTGGAAATG TTGAGGGAGA AAAAGTTTTA TGCCAAGTTC TCTAAGTGTG 539 AGTTTTGGCT AGATTCAGTG TCCTTCTTGG GGCGTGTGGT TTATAAGGAT GAAGTGATGG 7109 |||||||||| |||| |||| |||||||||| || ||||| || ||||||| | |||||||| AGTTTTGGCT AGATGTAGTG TCCTTCTTGG GGAACGTGGT TTCTAAGGAT GGAGTGATGG 599 TGGATCCTTC TAAGGTCGAA GCAGTGAAGA GTTGGGTAAG ACCTACTAAT GTTACAGAGG 7169 |||||||||| |||| | || ||||||||| ||||||||| |||||||||| || |||| TGGATCCTTC TAAGATTGAG ACAGTGAAGA ATTGGGTAAG ACCTACTAAT GTGTCAGAAA 659 TAAGGAGCTT CGTTGGTTTA GCTAGCTACT ACCGTCGATT TGTCAAGGGA TT 7221 |||||||||| ||||| ||| |||||||||| |||| ||||| |||||||||| || TAAGGAGCTT TGTTGGGTTA GCTAGCTACT ACCGCCGATT TGTCAAGGGA TT 711 hqPGS_C08HBa0294K15.1+_SGN-U326740- (6510 7221) ******************************************************************************** EST sequence 97 -strand 587 n (File: SGN-U328094-) 1 GCAATTAAAG GTGCATGAAC GTAATTATCC GACCCATGAT TTGGAGTTAG CGGCAGTAGT 61 GATTGCATTA AAGTAATAGA GACATTATCT CTATGGGGTT AAGTGTGAAG TCTATATGGA 121 TCATCGTAGT TTACAGTATG TCTTTACTCA GAAAGATTTG AATTTGAGAC AGAGGAGATC 181 GATGGAGCTA CTGAAGGACT ATGATATCAC TATCTTGTAT CATCCGGGAA AGGCTAATGT 241 TGTGGCAGAT GCTTTAAGTA GAAAGGCAGG GAGCATGGGA AGTCTAGCTC ACTTGCAGGT 301 TTCTAGATGC CCATTGGCTA GAGAGGTTCA GACTCTGGCT AATGACCTTA TGAGGCTAGA 361 ATTAAATGAG AAGGGAGAAT TTTTGGCTTG TGTGGAGGCA AGATCTTCCT TTCTTGATAA 421 GATTAAAGGA AAGCAGTTTA CCGATGAGAA ACTGATCTGG ATTCGAGATA AGGTAATGCG 481 AGGAGAGGCT AAAGAAGCAA AAATCGATAA GGAAGGTGTT TTGAGGATTA AGGGAAAGGT 541 ATGTGTACCC CGTGCCGACG ATTTGATTCA CACTATTCTT ACAGAGG Predicted gene structure (within gDNA segment 6840 to 9095): Exon 1 7450 8034 ( 585 n); cDNA 1 585 ( 585 n); score: 0.940 MATCH C08HBa0294K15.1+ SGN-U328094- 0.940 585 0.997 C PGS_C08HBa0294K15.1+_SGN-U328094- (7450 8034) Alignment (genomic DNA sequence = upper lines): GCAATTAAAG GTGCATGAAC GTAATTATCC AACCCATGAT TTGGAGTTGG CTGCGGTAGT 7509 |||||||||| |||||||||| |||||||||| ||||||||| |||||||| | | || ||||| GCAATTAAAG GTGCATGAAC GTAATTATCC GACCCATGAT TTGGAGTTAG CGGCAGTAGT 60 GTTTGCATTA AAGCAATGGA GACATTATCT ATATGGGGTT AAGTGTGAAG TCTATACGGA 7569 | |||||||| ||| ||| || |||||||||| ||||||||| |||||||||| |||||| ||| GATTGCATTA AAGTAATAGA GACATTATCT CTATGGGGTT AAGTGTGAAG TCTATATGGA 120 TCATCGTAGT TTACAGTATA TCTTTACTCA GAAAGATTTG AATTTGAGAC AGAGGAGATG 7629 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| ||||||||| TCATCGTAGT TTACAGTATG TCTTTACTCA GAAAGATTTG AATTTGAGAC AGAGGAGATC 180 GATGGAACTA CTGAAGGACT ATGATATCAC TATCTTGTAT CATCCGGAAA AAGCTAATGT 7689 |||||| ||| |||||||||| |||||||||| |||||||||| ||||||| || | |||||||| GATGGAGCTA CTGAAGGACT ATGATATCAC TATCTTGTAT CATCCGGGAA AGGCTAATGT 240 TGTGGCAGAT GTTTTAAGTA GAAAGGCAGG GAACATGGGA AGTCTAGCCC ACTTGCAGGT 7749 |||||||||| | |||||||| |||||||||| || ||||||| |||||||| | |||||||||| TGTGGCAGAT GCTTTAAGTA GAAAGGCAGG GAGCATGGGA AGTCTAGCTC ACTTGCAGGT 300 TTCTAGACGC CCATTGGCTA GAGAGGTTCA GACTCTGGAT AATGACCTTA TGAGGCTAGA 7809 ||||||| || |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| TTCTAGATGC CCATTGGCTA GAGAGGTTCA GACTCTGGCT AATGACCTTA TGAGGCTAGA 360 AGTAAATGAG AAGGGAGGAT TTTTGGTCTG TGTGGAGGCA AGATCTTCCT TTCTTGATAA 7869 | |||||||| ||||||| || |||||| || |||||||||| |||||||||| |||||||||| ATTAAATGAG AAGGGAGAAT TTTTGGCTTG TGTGGAGGCA AGATCTTCCT TTCTTGATAA 420 GATTAAAGGA AAGCAGTTTA CCGATGAGAA ACTGATCTGG ATCCGAGATA AGGTGTTGCG 7929 |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| |||| |||| GATTAAAGGA AAGCAGTTTA CCGATGAGAA ACTGATCTGG ATTCGAGATA AGGTAATGCG 480 AGGAGAGGTT AAAGAAGCAA AAATCGATGA GGAAGGTGTT TTGAGGATTA AGGGAAGGGT 7989 |||||||| | |||||||||| |||||||| | |||||||||| |||||||||| |||||| ||| AGGAGAGGCT AAAGAAGCAA AAATCGATAA GGAAGGTGTT TTGAGGATTA AGGGAAAGGT 540 ACGTGTACCC CGCGTCGATG ACTTGATTCA CACTGTTCTT ACAGA 8034 | |||||||| || | ||| | | |||||||| |||| ||||| ||||| ATGTGTACCC CGTGCCGACG ATTTGATTCA CACTATTCTT ACAGA 585 hqPGS_C08HBa0294K15.1+_SGN-U328094- (7450 8034) ******************************************************************************** EST sequence 89 -strand 890 n (File: SGN-U336382-) 1 AGAGGGCTCC AATTCCTTTT CTGGTTCCTC CAGAAAGGTT AATTTCGGGC GGAATTTTTA 61 ATTAGAAAGG GGGGACCATG GAAATTTTCC CCCCCTTGCC GTTTTCTAAA TGCCCATTGG 121 GTAGAGAGGT TCAGACTCTG GTTAATGCCC TTAGGGNCTA GAAGTAAATG AGAGGGAGGG 181 ATTCTGGCCT GTGGGGAAGC AAAATCTTCC TTTCTTGACA AGATTAAGGG AAAGCAGTTC 241 ACTGATGAGA AACTGATCCC GATTCGAGAT AAGGTATTGC GAGGAGAGGC TAAAGAAGCA 301 AAAATCGATG AGGAAGGTGT TTTGAGAATA AGGGAAGGAG TATGTGTACC CCGCGTCGAT 361 GATTTGATTC ACACTATTCT TATATAGGCT CATAGTTCGA AGTACTCTAT ACATCCTGGT 421 GCAAACAAGA TGTATCGTGA CCTAAAGCAA CATTTTTGGT GGAGTAGGAT GAAGCGTGAC 481 ATTGTTAATT TTGTTGCTCA ATGCCCGAAT TGTCAGCAAG TAAAGTATGA ACACCAGAGG 541 CCTGGAGGGA CACTTCAGAG AATGCCCATT CCTGAATGGA AGTGGGAGAG AATTGCAATG 601 GACTTCGTGG TTAGTCATCC AAAGACGATG GGTAGGTATG ACTCTATTTG GGTGATTGTT 661 GACAGATTAA CTAAGTCTGC TCACTCTATT TCGGTTAAGG TGACTTACAA TGCAGAGAAG 721 TTAGCCAAAC TTTACATCTT AGAAATTGTT CGATTGCACG GAGTTCCACT CTCCATCATA 781 TCAGATAGAG GTACGCAATT TACTTCTAAG TTTTGGAAAA CAGTACATGC CGAGCCTGCA 841 GCCCGGGGGA TCCACTAGTT GTAGAGCGGC CGCCACCGCG GTGAGCTCCA Predicted gene structure (within gDNA segment 5948 to 10326): Exon 1 7701 8481 ( 781 n); cDNA 56 833 ( 778 n); score: 0.901 MATCH C08HBa0294K15.1+ SGN-U336382- 0.901 781 0.878 C PGS_C08HBa0294K15.1+_SGN-U336382- (7701 8481) Alignment (genomic DNA sequence = upper lines): TTTTAAGTAG AAAGGCAGGG AACATGGGAA GTCTAGCCCA CTTGCAGGTT TCTAGACGCC 7760 |||||| ||| ||||| ||| | ||||| || | | ||| ||||| | || |||| | ||| TTTTAATTAG AAAGG-GGGG ACCATGGAAA TTTTCCCCCC CTTGCCGTTT TCTAAATGCC 114 CATTGGCTAG AGAGGTTCAG ACTCTGGATA ATGACCTTAT GAGGCTAGAA GTAAATGAGA 7820 |||||| ||| |||||||||| ||||||| || ||| ||||| | | |||||| ||||||||| CATTGGGTAG AGAGGTTCAG ACTCTGGTTA ATGCCCTTA- GGGNCTAGAA GTAAATGAG- 172 AGGGAGGATT TTTGGTCTGT GTGGAGGCAA GATCTTCCTT TCTTGATAAG ATTAAAGGAA 7880 ||||||| | | ||| |||| | ||| |||| ||||||||| |||||| ||| ||||| |||| AGGGAGGGAT TCTGGCCTGT GGGGAAGCAA AATCTTCCTT TCTTGACAAG ATTAAGGGAA 232 AGCAGTTTAC CGATGAGAAA CTGATCTGGA TCCGAGATAA GGTGTTGCGA GGAGAGGTTA 7940 ||||||| || ||||||||| |||||| || | |||||||| ||| |||||| ||||||| || AGCAGTTCAC TGATGAGAAA CTGATCCCGA TTCGAGATAA GGTATTGCGA GGAGAGGCTA 292 AAGAAGCAAA AATCGATGAG GAAGGTGTTT TGAGGATTAA GGGAAGG-GT ACGTGTACCC 7999 |||||||||| |||||||||| |||||||||| ||| || ||| ||||||| || | |||||||| AAGAAGCAAA AATCGATGAG GAAGGTGTTT TGA-GAATAA GGGAAGGAGT ATGTGTACCC 351 CGCGTCGATG ACTTGATTCA CACTGTTCTT ACAGACGCTC ATAGTTCAAG GTATTCTATA 8059 |||||||||| | |||||||| |||| ||||| | | | |||| ||||||| | ||| |||||| CGCGTCGATG ATTTGATTCA CACTATTCTT ATATAGGCTC ATAGTTCGAA GTACTCTATA 411 CATCCTGGTG CAACCAAGAT GTATCGTGAT CTAAAGCAAC ATTTTTGGTG AAGTAGGATG 8119 |||||||||| ||| |||||| ||||||||| |||||||||| |||||||||| ||||||||| CATCCTGGTG CAAACAAGAT GTATCGTGAC CTAAAGCAAC ATTTTTGGTG GAGTAGGATG 471 AAGCGTGACA TTGTTAATTT TGTTGCTCAA TGCCCGAATT GTCTGCAGGT AAAGTATGAA 8179 |||||||||| |||||||||| |||||||||| |||||||||| ||| ||| || |||||||||| AAGCGTGACA TTGTTAATTT TGTTGCTCAA TGCCCGAATT GTCAGCAAGT AAAGTATGAA 531 CACCAGAGGC CTGGAGGGAC ACTTCAGAGA ATGCCCATTC CTGAATGGAA GTGGGAGAGA 8239 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCAGAGGC CTGGAGGGAC ACTTCAGAGA ATGCCCATTC CTGAATGGAA GTGGGAGAGA 591 ATTGCAATGG ACTTCGTGGT TAGTCTTCCA AAGACAACGG GTAAGTATGA CTCCATTTGG 8299 |||||||||| |||||||||| ||||| |||| ||||| | || ||| |||||| ||| |||||| ATTGCAATGG ACTTCGTGGT TAGTCATCCA AAGACGATGG GTAGGTATGA CTCTATTTGG 651 GTAATTGTTG ACAGATTAAC TAAGTCTGCT CATTTCATTC CGGTCAAGGT GACTTATAAT 8359 || ||||||| |||||||||| |||||||||| || | ||| |||| ||||| |||||| ||| GTGATTGTTG ACAGATTAAC TAAGTCTGCT CACTCTATTT CGGTTAAGGT GACTTACAAT 711 GCAGAGAAGT TAGCCAAACT TTACATCTCA GAAATTGTTC GATTGCATGG AGTTCCACTT 8419 |||||||||| |||||||||| |||||||| | |||||||||| ||||||| || ||||||||| GCAGAGAAGT TAGCCAAACT TTACATCTTA GAAATTGTTC GATTGCACGG AGTTCCACTC 771 TCCATTATAT CAGATAGAGG TACGCAGTTT ACTTCTAAAT TTTGGAGAAT ATTGCATGCC 8479 ||||| |||| |||||||||| |||||| ||| |||||||| | |||||| || | | |||||| TCCATCATAT CAGATAGAGG TACGCAATTT ACTTCTAAGT TTTGGAAAAC AGTACATGCC 831 GA 8481 || GA 833 hqPGS_C08HBa0294K15.1+_SGN-U336382- (7701 8481) ******************************************************************************** EST sequence 87 -strand 790 n (File: SGN-U336381-) 1 CGACGTTGTA AAACGACGGC CAGTGAATTG TAATACGACT CACTATAGGG CGAATTGGGT 61 ACCGGGCCCC CCCCTTAGCA AGTCCGGCTT CCCACAGGAG AACCTTCACG TTTGCGGGCT 121 TCCTCCTCTT CCAGTAACCT CTTTTGACGC TCCTCCTCAG TTCGCAGAAA GAATAACATT 181 TTCCTCTTAG CTTCCCTCTC CTGCTTCCTT GATTGAATTA TCTGGCTGAT CCTTTCTCGT 241 CTCTCCTGCT TCAATCTATT GAGTTCAGCT TCCCGGCTAC TAACAACTCT TTCTTGCAAA 301 ATCCTCTGCA TAATTAGAAA CATATCAGCG GATCTGTTTT GTTAAGAGAC CAAGACCAAT 361 CTTCAAGCAA GCCCGTGGCT TCACAAATTT TGAACTAGTG GGAAAGTAGC GTCCATTAGC 421 ATTTCTAACC GAATGGTCAG CATGTAAAGT ATGAACAGCA AAGGCCTGGA CGGACACTTC 481 AGAGAATGCC CATTCCTGAA TGGAAGTGGG AGAGAATTGC AATGGACTTC GTGGTTGGCC 541 TTCCAAAGAC AATGGGTAAG TATGACTCCA TTTGTGTAAT TGTTGACAGA TTGACTAAGT 601 CTGCTCATTG CATTCCGGTC AAGGTGACCT ACAATGTAGA GAAGTTAGTC AGAATCTATA 661 TCTCAGAAAT CGTTCGATTG CATGGAGTTC CACTCTCCAT CATATCAGAT AGAGGTATGC 721 AGTTTACCCT GCAGCCCGGG GGATCCACTA GTTCTAGAGC GGCCGCCACC GCGGTGGAGC 781 TCCAGCTTTT Predicted gene structure (within gDNA segment 2876 to 9771): Exon 1 8153 8438 ( 286 n); cDNA 429 714 ( 286 n); score: 0.920 MATCH C08HBa0294K15.1+ SGN-U336381- 0.920 286 0.362 C PGS_C08HBa0294K15.1+_SGN-U336381- (8153 8438) Alignment (genomic DNA sequence = upper lines): CCGAATTGTC TGCAGGTAAA GTATGAACAC CAGAGGCCTG GAGGGACACT TCAGAGAATG 8212 |||||| ||| ||| ||||| ||||||||| || ||||||| || ||||||| |||||||||| CCGAATGGTC AGCATGTAAA GTATGAACAG CAAAGGCCTG GACGGACACT TCAGAGAATG 488 CCCATTCCTG AATGGAAGTG GGAGAGAATT GCAATGGACT TCGTGGTTAG TCTTCCAAAG 8272 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | ||||||||| CCCATTCCTG AATGGAAGTG GGAGAGAATT GCAATGGACT TCGTGGTTGG CCTTCCAAAG 548 ACAACGGGTA AGTATGACTC CATTTGGGTA ATTGTTGACA GATTAACTAA GTCTGCTCAT 8332 |||| ||||| |||||||||| |||||| ||| |||||||||| |||| ||||| |||||||||| ACAATGGGTA AGTATGACTC CATTTGTGTA ATTGTTGACA GATTGACTAA GTCTGCTCAT 608 TTCATTCCGG TCAAGGTGAC TTATAATGCA GAGAAGTTAG CCAAACTTTA CATCTCAGAA 8392 | |||||||| |||||||||| || |||| | |||||||||| || | | || ||||||||| TGCATTCCGG TCAAGGTGAC CTACAATGTA GAGAAGTTAG TCAGAATCTA TATCTCAGAA 668 ATTGTTCGAT TGCATGGAGT TCCACTTTCC ATTATATCAG ATAGAG 8438 || ||||||| |||||||||| |||||| ||| || ||||||| |||||| ATCGTTCGAT TGCATGGAGT TCCACTCTCC ATCATATCAG ATAGAG 714 hqPGS_C08HBa0294K15.1+_SGN-U336381- (8153 8438) ******************************************************************************** EST sequence 54 +strand 930 n (File: SGN-U339540+) 1 GGAGCTCCCC GCGGTGGCGG CCGCTCTAGA ACTAGTGGAT CCCCCGGGCT GCAGGAAGAG 61 ATTCGATGGA GAAAGTGAAG TCTATTCAAG AAAAGCTTCT AGCGGCGCAA AGTAGACAAA 121 AAGAATATGC AGATCGAAAG GTTAGAGACT TAGAGTTCAT GGAGGGCGAA CAAGTCTTGT 181 TGAAAGTCTC GCCAATGAAA GGGGTGATGC GGTTTCGTAA AAGAGGTAAG TTAAGTCCAA 241 GGTATATTGG ACCATTTGAG GTACTAAAGC GAGTAGGGGA GGTGGCTTAT GAATTAGCCT 301 TACCTCCAGG GCTGTCCGGA GTACATCCGG TATTTCATGT ATCCATGTTG AAAAGATACC 361 ATGGAGATGG AAACTACATC ATCCGTTGGG ATTCAGTTTC GCTTGGTGAG AATTGGACTT 421 ATGAGGAGGA ACCAGTTGCT ATTTTAGATA GAGAGGTTCG CAAGTTGAGG TCGAGAGAAA 481 TTGCATCCAT CAAAGTTCAA TGGAAGAATC GACCGGTTGA AGAAGCTACT TGGGAGAAGG 541 AGGCAGATAT GCAAGAAAAA TACCCACATC TGTTTACAGA TTCAGGTACT CCTTTTCGCC 601 ATTGTTTTTC TTCATTTGAT CGTTCGGGGA CGAACGATGG GTAAATTGGT ATCTATTGTA 661 ACGACCTGTT TAGTCGTTTT GAGCAGCAGA TTTTAATTCT GGAAAAACTG GCCAAGACCA 721 CGGGCACTGC GACGGACCGT CACAGGCACG ACGGCCCGTC GAAGGTGCAT CGTTTCAGCA 781 TACTTAGAAT TTCTGAATTT GGATATGAAA ATCGACTCTC TTTAATTTTG TGACGACCTG 841 CAGACGTGCC ATCACATCCA CGACGAACCG TCGTGAGTTC CCGTTGCAAA CACTTNCACT 901 TTTGAGATTT GGTACAGAAA CGAGTTCTGA Predicted gene structure (within gDNA segment 7142 to 12430): Exon 1 8776 9442 ( 667 n); cDNA 72 746 ( 675 n); score: 0.832 Intron 1 9443 9516 ( 74 n); Pd: 0.000 (s: 0.66), Pa: 0.000 (s: 0) Exon 2 9517 9534 ( 18 n); cDNA 747 764 ( 18 n); score: 0.833 MATCH C08HBa0294K15.1+ SGN-U339540+ 0.832 685 0.737 C PGS_C08HBa0294K15.1+_SGN-U339540+ (8776 9442,9517 9534) Alignment (genomic DNA sequence = upper lines): AAAGTGAAAT GCATTCAAGA AAAGCTTTTA GCGGCTCAAA GTAGACAAAA AGAATATGCA 8835 |||||||| | |||||||| ||||||| || ||||| |||| |||||||||| |||||||||| AAAGTGAAGT CTATTCAAGA AAAGCTTCTA GCGGCGCAAA GTAGACAAAA AGAATATGCA 131 GATCGAAAGG TTAGAGACTT GGAGTTTATG GAGGGTGAGC AAGTTTTGCT GAAGGTTTCA 8895 |||||||||| |||||||||| ||||| ||| ||||| || | |||| ||| | ||| || || GATCGAAAGG TTAGAGACTT AGAGTTCATG GAGGGCGAAC AAGTCTTGTT GAAAGTCTCG 191 CCCATGAAAG GGGTGATGCG GTTTGGT--- A-A-G---CT T-AGTCCGAG GTATATTGGT 8946 || ||||||| |||||||||| |||| || | | | | | ||||| || ||||||||| CCAATGAAAG GGGTGATGCG GTTTCGTAAA AGAGGTAAGT TAAGTCCAAG GTATATTGGA 251 CCATTTGAAG TTCTGAAGCG CGTGGGGGAG GTAGCGTATG AATTAGCCTT GCCCCCAGGA 9006 |||||||| | | || ||||| || |||||| || || |||| |||||||||| || ||||| CCATTTGAGG TACTAAAGCG AGTAGGGGAG GTGGCTTATG AATTAGCCTT ACCTCCAGGG 311 CTGTCAGGAT TGCACCCGGT ATTTCATGTG TCTATGTTGA AAAGATACCA TGGGGATGGA 9066 ||||| ||| | || ||||| ||||||||| || ||||||| |||||||||| ||| |||||| CTGTCCGGAG TACATCCGGT ATTTCATGTA TCCATGTTGA AAAGATACCA TGGAGATGGA 371 AACTACATCA TTCGTTGGGA TTCAGTTCTT CTTGATGAGA ATTTGTCTTA TGAGGAGGAG 9126 |||||||||| | |||||||| ||||||| |||| ||||| ||| | |||| ||||||||| AACTACATCA TCCGTTGGGA TTCAGTTTCG CTTGGTGAGA ATTGGACTTA TGAGGAGGAA 431 CCTGTTGCTA TCTTAGATAG AGAAGTACGC AAGCTGAGGT CAAGGGAGAT TGCATCCATC 9186 || ||||||| | |||||||| ||| || ||| ||| |||||| | || || || |||||||||| CCAGTTGCTA TTTTAGATAG AGAGGTTCGC AAGTTGAGGT CGAGAGAAAT TGCATCCATC 491 AAGGTTCAAT GAAAGAATCG ACCAATTGAA GAGTCCACTT GGGAGAAGGA GGCTGATATG 9246 || ||||||| | |||||||| ||| ||||| || | |||| |||||||||| ||| |||||| AAAGTTCAAT GGAAGAATCG ACCGGTTGAA GAAGCTACTT GGGAGAAGGA GGCAGATATG 551 CAAGAAAAAT ACCCACACCT GTTTACAGAT TCAGGTACTC CTTTTCGCCC TTGTTTTTCT 9306 |||||||||| ||||||| || |||||||||| |||||||||| ||||||||| |||||||||| CAAGAAAAAT ACCCACATCT GTTTACAGAT TCAGGTACTC CTTTTCGCCA TTGTTTTTCT 611 TCTTGTGATC GTTCAAGGAC GAACGATGGG TAAATTGGTG TCTATTGTAA CGACCTG-TT 9365 || | ||||| |||| |||| |||||||||| ||||||||| |||||||||| ||||||| || TCATTTGATC GTTCGGGGAC GAACGATGGG TAAATTGGTA TCTATTGTAA CGACCTGTTT 671 AGTCGTTTTG AGCAGTAGAG TTTATTTCTG TTAATAACTG TCTGGGTCGA TGGATACCAC 9425 |||||||||| ||||| ||| |||| ||||| || ||||| | | | | || || | AGTCGTTTTG AGCAGCAGAT TTTAATTCTG -GAAAAACTG GCCAAGACCA CGGGCACTGC 730 GACGGACCGT CGAGGGGGTC TCGTTCCAAA ACACTTAGTT TCTGAAAAAT TGGGTACTGA 9485 |||||||||| | | || GACGGACCGT C-ACAGG... .......... .......... .......... .......... 746 GAACAACTCT CTGAACTTCG CAATGGAAGA GCAGGACGGA CCGTCGTAG 9534 || ||||| |||||| || .......... .......... .......... .CACGACGGC CCGTCGAAG 764 hqPGS_C08HBa0294K15.1+_SGN-U339540+ (8776 9442) ******************************************************************************** EST sequence 67 -strand 969 n (File: SGN-U335080-) 1 GTGGAGGTAG GTAATGGTTT AAGTATTTCC ATAGTAACTT TTAATAGCAA TTGATATGTA 61 TTGGGTAGTA TTGTAAAGTC TTTTATATGC TTAATTGTAT GCTTGCATGA TGTGATTATG 121 AAATTGTAAT GGGTTGGAAA GATAAGGTTG TGAAGCTTAA AACCTAAAAC CCTCTTTGTT 181 AATGATGATG TCTTGGTATA AAAGAAGGCT TGATGAACTA AAAGAATGAG GTTAGGGGAT 241 CGGGTGTCAC GAACCGACAC GTAGTATTAA TGGATCGGGT GTCACGAACC GACACATAGT 301 ATTAATGGAT CGGGTGTCAC GAATCGGCAC GTAGTATTAG GAGATCGGGT GTAACGAACC 361 GACACGTAGT ATTAGGGGAT CGGGTGTCAC GAACCGACAC GTAGCATTAG GGGATCGGAG 421 TATCACGTTC CGACACCACG ATAGTAAAAA GAATGAATCT TGAATTATGT TAATGTACTC 481 AATTTAATGA ACCTGTTTCC CAAATGAGTA TGGTGTGGAG GCTTGAGTCC TCATAGATGT 541 TCTTGGGTTG TGCCCAATGG TTATGGTACT TGTTGTTGTC ACCTGTTAAG TGTTATGGTT 601 GATTTTATTT TATTATTTGA TATATATTGT TCTCTATTCT GAGTTGGCCG ATGATATCTA 661 CTCAGTACTC GTGTTTGTAC TGACCCCTAC TTTTATGTTT TCTTTTTGTT AATTGTGGAG 721 TGCAGCAAAC GTACCGTCGT CTTCAACTCA ACCGCAACTC TAACCAGTCT TCATCACGTC 781 AGATTTCAGG GTGAGCTATT GTTCCTAGCT CGGACTGGAT TCTCTCTCAT TCATGTCTTG 841 ATGTCCTTGA AGATCAGACA TGCTGGTGCC GAATTCCTGC AGCCCGGGGG ATCCACTAGT 901 TCTAGAGCGG CAGCCACCGC GGTGANGCCG ATCGCATTGC ATTTCATTNN NNNNNNNGNA 961 NACTCTCGT Predicted gene structure (within gDNA segment 7821 to 12884): Exon 1 10000 10405 ( 406 n); cDNA 41 443 ( 403 n); score: 0.773 Intron 1 10406 10440 ( 35 n); Pd: 0.000 (s: 0.80), Pa: 0.000 (s: 0.94) Exon 2 10441 10849 ( 409 n); cDNA 444 851 ( 408 n); score: 0.889 MATCH C08HBa0294K15.1+ SGN-U335080- 0.831 815 0.841 C PGS_C08HBa0294K15.1+_SGN-U335080- (10000 10405,10441 10849) Alignment (genomic DNA sequence = upper lines): TTAATAGCGA ATGATATGTG TTGGGTAGTA TTGTAAAGTC TTCTATATGC TTAATTGTGT 10059 |||||||| | |||||||| |||||||||| |||||||||| || ||||||| |||||||| | TTAATAGCAA TTGATATGTA TTGGGTAGTA TTGTAAAGTC TTTTATATGC TTAATTGTAT 100 GCTTGCATGA CGTGATTATA TAATTGTGAT AAAATAAGCA TGATGAGGCT GTTGAATCTT 10119 |||||||||| |||||||| |||||| || | | | ||| ||| | | |||| ||| GCTTGCATGA TGTGATTATG AAATTGTAAT -GGGTTGGAA AGATAAGGTT G-TGAAGCTT 158 -AAACCTTAA AACCTCTTTG TTAATGATGA TACCTTGGTA TAAAAGAAGG CTTGATGAAC 10178 |||||| || | |||||||| |||||||||| | ||||||| |||||||||| |||||||||| AAAACCTAAA ACCCTCTTTG TTAATGATGA TGTCTTGGTA TAAAAGAAGG CTTGATGAAC 218 TGAAAGAATG AGAATTAGGG GATCGGAGTG TCACATTCCG ACAC-CAGGA TAGTATGGAT 10237 | |||||||| || |||||| |||||| ||| |||| ||| |||| || | | |||||| TAAAAGAATG AG-GTTAGGG GATCGG-GTG TCACGAACCG ACACGTAGTA T-TAATGGAT 275 CGGGTGTCAC GTTCCGACAC -CAGGATAGT ATGGATCGGG TGTCACGTTC CGACACCAGG 10296 |||||||||| | ||||||| || || |||||||||| ||||||| || ||| | CGGGTGTCAC GAACCGACAC ATAGTAT-TA ATGGATCGGG TGTCACGAAT CGGCACGTAG 334 ATAGTATG-G ATCGGGTGTC ACG-TTCGAC ACCAGGATAG TA-TGGATCG AGTATCACGT 10353 || || | | ||||||||| ||| |||| || | || || |||||| || ||||| -TATTAGGAG ATCGGGTGTA ACGAACCGAC ACGTAG-TAT TAGGGGATCG GGTGTCACGA 392 TCCGACACCA GGATAGTAGA GGATCAGAGT GTCACGTTCC GACACCAGGA TAGTATGGAT 10413 ||||||| | | ||| ||||| |||| ||||||||| ||||||| || || ACCGACACGT AG-CATTAGG GGATCGGAGT ATCACGTTCC GACACCACGA TA........ 443 CGGGTGTCAC GTTTTGACAC CAGGATAGTA AAAAGAATGA ATCTTGAATT ATGCTAATAT 10473 ||| |||||||||| |||||||||| ||| |||| | .......... .......... .......GTA AAAAGAATGA ATCTTGAATT ATGTTAATGT 476 ACTCAAATTT AATGAACCTG TTTCCCAAAT GAGTATGGTG TGGAGGCTTG AGTCCTCATA 10533 |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTC-AATTT AATGAACCTG TTTCCCAAAT GAGTATGGTG TGGAGGCTTG AGTCCTCATA 535 GATGTGCTTG GGTTGTGCCC AATGGTTATG GTACTTGTTG TTGTCACCTG TTGAGTATTG 10593 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| || ||| || GATGTTCTTG GGTTGTGCCC AATGGTTATG GTACTTGTTG TTGTCACCTG TTAAGTGTTA 595 TAGTTGATTT TATGTTATTA TCTGATGTAT ATTGTTTTCT ATTTTGAGTT GGCCGATGAT 10653 | |||||||| ||| |||||| | |||| ||| |||||| ||| ||| |||||| |||||||||| TGGTTGATTT TATTTTATTA TTTGATATAT ATTGTTCTCT ATTCTGAGTT GGCCGATGAT 655 ACCTACTCAG TACTTGTGCC TTGTACTGAC CCCTACTTGT ATGTTTCTTT CTTTGTTATT 10713 | |||||||| |||| ||| |||||||||| |||||||| | |||||| | | ||||||| | ATCTACTCAG TACTCGTG-T TTGTACTGAC CCCTACTTTT ATGTTT-TCT TTTTGTTAAT 713 TGTGGAGTGC AACAAACGTG CCAACAACTT CGACTCAACC ACAACTCTAG CCAGACTTCA 10773 |||||||||| | ||||||| || | ||| | |||||||| |||||||| |||| ||||| TGTGGAGTGC AGCAAACGTA CCGTCGTCTT CAACTCAACC GCAACTCTAA CCAGTCTTCA 773 GCATAATCAG ATTTCAGGGT GAGCTATTGT TCCTAGCTCG GACTGGATTC T-T-TCTTTC 10831 || |||| |||||||||| |||||||||| |||||||||| |||||||||| | | || ||| TCA-CGTCAG ATTTCAGGGT GAGCTATTGT TCCTAGCTCG GACTGGATTC TCTCTCATTC 832 AGGTCTTGAT GT-CTTGAA 10849 | |||||||| || |||||| ATGTCTTGAT GTCCTTGAA 851 hqPGS_C08HBa0294K15.1+_SGN-U335080- (10000 10405,10441 10849) ******************************************************************************** EST sequence 63 -strand 920 n (File: SGN-U335071-) 1 AAGGCTAGAT AATTATATAA TGAGAAGATG ATGCCTTGTG TAAAAGAAGC CTGATGGATT 61 GGGGATCGGG TGCCACGTTC CGGTACCAGG ATAGAATGAT TATGAGGATC GGAGTGTCAC 121 GTTCCGACCC CAGGATAGAT ATGGGATCGG GTGCCACGTT CCGGTACCAG GATAGAATAT 181 GAGGATCGGA GTGTCACGTT CCGACACCAG GATAGAAAAT GGATCGGGTG CCACGTTCCG 241 GTACCAGGAT AGAATGAGGA TCGGAGTGCC ACGTTCCGGC ACCAGGATAG AAATAGAGGA 301 TCGGAGTGTC ACGTACCGAC ACAAGAGGAA GAAAGATAAT GAATCTTGAA AGATAATGAA 361 TATACTCAAT CTAATGAACT TAATTCCCAA ATGAGTATGG TATTGAGGCT TGAGTCCTCA 421 TGTGTGAACT CGGTTGTAGT TATTGATGAA TTCATGGTGT TATTGCTACA TGTTGAGTAT 481 TGTAGTTGAT TTACATTATT ATTGATATAT ACTGTTCCCT ATTTTGAGTT GGCCGATGAT 541 ATCTACTCAG TACGTGTGGT TGTACTGACC CCTACTTTCA TGTTTTCCTC TTTGTTATTT 601 GTGTAATGCA GCAAACGTTC CGTCAACTTC AACTCAACAG TAGATCTAGC CAGTCTTCAC 661 TTCATCGGAA AATTCAGGGT GAGCTAATGC GTCTAGCTTG GACTGGGTCT TCTTCTTCAA 721 GTCTTGATGC CTTGAATTTC CGGCATGGAC TAGCTTTTTA GTTATTTTGT TCTTAGACAT 781 TCCTAGTTAA GTAATTTGAG ATAGATGTTC TTGTGATGAT GACTTCCAGA TTTTGGGGAT 841 AATAATAATA GTATTGAATT GTTTTTATTA AAAAAAAAAA AAAAAAAAAA AAAAACTCGA 901 GGGGGGGCCC GGTCCCAATG Predicted gene structure (within gDNA segment 6055 to 12331): Exon 1 10180 10302 ( 123 n); cDNA 90 217 ( 128 n); score: 0.760 Intron 1 10303 10334 ( 32 n); Pd: 0.000 (s: 0.70), Pa: 0.000 (s: 0.79) Exon 2 10335 10966 ( 632 n); cDNA 218 848 ( 631 n); score: 0.769 PPA cDNA 870 896 MATCH C08HBa0294K15.1+ SGN-U335071- 0.768 755 0.821 C PGS_C08HBa0294K15.1+_SGN-U335071- (10180 10302,10335 10966) Alignment (genomic DNA sequence = upper lines): GAAAGAATGA GAATTAGGGG ATCGGAGTGT CACATTCCGA CACCAGGATA G-TAT-GGAT 10237 || ||||||| | | | || |||||||||| ||| |||||| | |||||||| | ||| |||| GATAGAATGA TTA-T-GAGG ATCGGAGTGT CACGTTCCGA CCCCAGGATA GATATGGGAT 147 CGGGTGTCAC GTTCCGACAC CAGGATAG-- TAT--GGATC GG-GTGTCAC GTTCCGACAC 10292 |||||| ||| |||||| || |||||||| ||| ||||| || ||||||| |||||||||| CGGGTGCCAC GTTCCGGTAC CAGGATAGAA TATGAGGATC GGAGTGTCAC GTTCCGACAC 207 CAGGATAGTA TGGATCGGGT GTCACGTTCG ACACCAGGAT AGTATGGATC GAGTATCACG 10352 |||||||| | ||||||| | || |||| CAGGATAGAA .......... .......... .......... ..AATGGATC GGGTGCCACG 235 TTCCGACACC AGGATAGTA- GAGGATCAGA GTGTCACGTT CCGACACCAG GATAG---TA 10408 ||||| ||| ||||||| | ||||||| || ||| |||||| ||| |||||| ||||| || TTCCGGTACC AGGATAGAAT GAGGATCGGA GTGCCACGTT CCGGCACCAG GATAGAAATA 295 -TGGATCGG- GTGTCACGTT TTGACACCAG GATAGTAAAA AGAATGAATC TTGAATTATG 10466 ||||||| ||||||||| ||||| || | ||| | |||||||| ||||| || GAGGATCGGA GTGTCACGTA CCGACACAAG AGGAAGAAAG ATAATGAATC TTGAAAGATA 355 CT-AATATAC TCAAATTTAA TGAACCTGTT TCCCAAATGA GTATGGTGTG GAGGCTTGAG 10525 | ||||||| || ||| ||| ||||| | | |||||||||| ||||||| | |||||||||| ATGAATATAC TC-AATCTAA TGAACTTAAT TCCCAAATGA GTATGGTATT GAGGCTTGAG 414 TCCTCATAGA TGTGCTTGGG TTGTGCCCAA TGGT-TATGG TACTTGTTGT TGTCACCTGT 10584 ||||||| || | | || |||| | || | || |||| | || || ||| TCCTCATGTG TGAAC-TCGG TTGTAGTTAT TGATGAATTC ATGGTGTTAT TGCTACATGT 473 TGAGTATTGT AGTTGATTTT ATGTTATTAT CTGATGTATA TTGTTTTCTA TTTTGAGTTG 10644 |||||||||| |||||| ||| | ||||||| |||| |||| |||| ||| |||||||||| TGAGTATTGT AGTTGA-TTT ACATTATTAT -TGATATATA CTGTTCCCTA TTTTGAGTTG 531 GCCGATGATA CCTACTCAGT ACTTGTGCCT TGTACTGACC CCTACTTGTA TGTTTCTTTC 10704 |||||||||| ||||||||| || |||| | |||||||||| ||||||| | ||||| || GCCGATGATA TCTACTCAGT ACGTGTG-GT TGTACTGACC CCTACTTTCA TGTTTTCCTC 590 TTTGTTATTT GTGGAGTGCA ACAAACGTGC CAACAACTTC GACTCAACCA CAACTCTAGC 10764 |||||||||| ||| | |||| ||||||| | | ||||||| ||||||| | |||||| TTTGTTATTT GTGTAATGCA GCAAACGTTC CGTCAACTTC AACTCAACAG TAGATCTAGC 650 CAGACTTCAG CATAATC--A GATTTCAGGG TGAGCTATTG TTCCTAGCTC GGACTGGATT 10822 ||| ||||| | | ||| | | ||||||| ||||||| || |||||| ||||||| | CAGTCTTCA- CTTCATCGGA AAATTCAGGG TGAGCTAATG CGTCTAGCTT GGACTGGGTC 709 CTTTCTTTCA GGTCTTGATG TCTTGAAGTT CGGACATGGA CCATCTCTTT TATTTATTTT 10882 | | |||| ||||||||| |||||| || | | |||||| | | || ||| || ||||||| TTCTTCTTCA AGTCTTGATG CCTTGAATTT CCGGCATGGA CTAGCT-TTT TAGTTATTTT 768 AGCTTCTTAG ATACTCTTAG ATTTAGTAAT TTGAGGATAG ATGTTCTTGT GATGATGACT 10942 | ||||||| | | || ||| || |||||| |||| ||||| |||||||||| |||||||||| -G-TTCTTAG ACATTCCTAG -TTAAGTAAT TTGA-GATAG ATGTTCTTGT GATGATGACT 824 TCCAGATTTT GGGGATAATG ATAA 10966 |||||||||| ||||||||| |||| TCCAGATTTT GGGGATAATA ATAA 848 hqPGS_C08HBa0294K15.1+_SGN-U335071- (10180 10302,10335 10966) ******************************************************************************** EST sequence 57 +strand 1035 n (File: SGN-U339541+) 1 TAGAACCATC GAGATCCACC TCGGTGGCTT CCGCTCTAGA ACTCGTGGAT CCCCCGGGCT 61 GCAGGTCTTG ATGAGAATTT GTCTTATGAG GAGGAGCCTG TTGCCATTTT AGATAGAGAA 121 GTCCGCAAAT TGAGGTCAAG GGAGATTGCA TCTATCAAAG TTCAATGGAA GAATCGACCA 181 GTTGAAGAAT CCACTTGGGA GAAGGAAGTT GATATGCGAG AAAGATACCC ATACCTGTTT 241 ACAGATTCAG GTACTCCTTT TCGCCCTTGT TTTTCTTCTT GTGATCGTTC GGGGACGAAC 301 GATGGGTAAA TTGGTATCTA TTGTAACGAC CTGTTTAGTC GTTTTGAGTA ACAGATTTTA 361 TTTCTGGAAA AACTGACTGA GACGACGGAT CCCACGACGG ACCGTCGAGG GGGTCTCGTT 421 CCAAAACACT TAGAATTCTG AAATTTGGGT ACTGAAATCG ACTCTCTGAA CTTCGTGACG 481 GAATGGCAGG ACGGACCGTC ACAGGCGTGA TGGGCCGTCA CAGACCCTTG GTAAAAATCT 541 AGTCTCTGAA CTCTGTGACG GACGTGCAGG ACGGACCGTC ACAGACTGCG TAATCCCAGG 601 CTGGGTCGGA TTTCTGTTAA ATGTTTTAAG GGGCGTTTTG GACTATTCTT GCTTATAATT 661 ATAAAAGTTG TGGTTGAATA TAAATAATCC AATTTCTTGA GGGTTAAAGG AGATAACCTT 721 AAATTAATTA GTGGGTTATT TTGGCATCCT TTATACTTAA ATATATGGTA ATTAGGGTAA 781 AAAGAAAGAG GGGTTTGGAT TAAGAAAAAT TGTAAGCACC CAGGAGAAGG GAAAGAAAAA 841 CAATCCGAGA GAAAGAGGGG ATACCCAAGG AGGAAACAAA GCTTTGGGAA AATGGCTTGC 901 TTGAACACCA AATTCTTGGG GGAAGCAAAC GTGCCCGGTT TTTTCACCTA ACCCGCAACT 961 CTTAGCCAGT CTTTTATTTC ACCCCAATTT CAGGGTGGGC TAATGCTTTT TAGCCTGGGA 1021 CTGGATTTTC CTTTC Predicted gene structure (within gDNA segment 7846 to 14419): Exon 1 9096 9969 ( 874 n); cDNA 66 925 ( 860 n); score: 0.801 Intron 1 9970 10725 ( 756 n); Pd: 0.994 (s: 0.65), Pa: 0.000 (s: 0.56) Exon 2 10726 10831 ( 106 n); cDNA 926 1035 ( 110 n); score: 0.618 MATCH C08HBa0294K15.1+ SGN-U339541+ 0.781 980 0.947 C PGS_C08HBa0294K15.1+_SGN-U339541+ (9096 9969,10726 10831) Alignment (genomic DNA sequence = upper lines): TCTTGATGAG AATTTGTCTT ATGAGGAGGA GCCTGTTGCT ATCTTAGATA GAGAAGTACG 9155 |||||||||| |||||||||| |||||||||| ||||||||| || ||||||| ||||||| || TCTTGATGAG AATTTGTCTT ATGAGGAGGA GCCTGTTGCC ATTTTAGATA GAGAAGTCCG 125 CAAGCTGAGG TCAAGGGAGA TTGCATCCAT CAAGGTTCAA TGAAAGAATC GACCAATTGA 9215 ||| ||||| |||||||||| ||||||| || ||| |||||| || ||||||| ||||| |||| CAAATTGAGG TCAAGGGAGA TTGCATCTAT CAAAGTTCAA TGGAAGAATC GACCAGTTGA 185 AGAGTCCACT TGGGAGAAGG AGGCTGATAT GCAAGAAAAA TACCCACACC TGTTTACAGA 9275 ||| |||||| |||||||||| | | |||||| || ||||| | |||||| ||| |||||||||| AGAATCCACT TGGGAGAAGG AAGTTGATAT GCGAGAAAGA TACCCATACC TGTTTACAGA 245 TTCAGGTACT CCTTTTCGCC CTTGTTTTTC TTCTTGTGAT CGTTCAAGGA CGAACGATGG 9335 |||||||||| |||||||||| |||||||||| |||||||||| ||||| ||| |||||||||| TTCAGGTACT CCTTTTCGCC CTTGTTTTTC TTCTTGTGAT CGTTCGGGGA CGAACGATGG 305 GTAAATTGGT GTCTATTGTA ACGACCTG-T TAGTCGTTTT GAGCAGTAGA GTTTATTTCT 9394 |||||||||| ||||||||| |||||||| | |||||||||| ||| | ||| ||||||||| GTAAATTGGT ATCTATTGTA ACGACCTGTT TAGTCGTTTT GAGTAACAGA TTTTATTTCT 365 GTTAATAACT GTCTGGGTCG ATGGATACCA CGACGGACCG TCGAGGGGGT CTCGTTCCAA 9454 | || |||| | ||| | || | |||| ||| |||||||||| |||||||||| |||||||||| G-GAAAAACT GACTGAGACG ACGGATCCCA CGACGGACCG TCGAGGGGGT CTCGTTCCAA 424 AACACTTAG- TTTCTGAAAA ATTGGGTACT GAGAACAACT CTCTGAACTT CGCAATGGAA 9513 ||||||||| ||||| ||| ||||||||| || | | ||| |||||||||| || | |||| AACACTTAGA ATTCTG-AAA TTTGGGTACT GAAATCGACT CTCTGAACTT CGTGACGGAA 483 GAGCAGGACG GACCGTCGTA GGCACGACGG ACCGTCACAT GGTCTTAAAT AAAAATTGAG 9573 |||||||| ||||||| | ||| || || |||||||| | | | | |||||| || TGGCAGGACG GACCGTCACA GGCGTGATGG GCCGTCACA- GACCCTTGGT AAAAATCTAG 542 TCTCTAAACT CTGTGACGAC TTAGCAGGAC GACCGTCGCA GGCACGAAGG ACCGTCACAG 9633 ||||| |||| |||| | | | | || ||| ||| || || || |||||||||| TCTCTGAACT CTGT---G-- --A-C--G-- GA-CGT-GCA GG-AC---GG ACCGTCACAG 584 ACTGCGTAA- CCCTGACTGG GTCGGATTTC TGTTAAAAGT TTTTAAGGGG TGTTTTGGAT 9692 ||||||||| ||| | |||| |||||||||| ||||||| | |||||||||| |||||||| ACTGCGTAAT CCCAGGCTGG GTCGGATTTC TGTTAAATG- TTTTAAGGGG CGTTTTGGAC 643 TATTCCTGCT TATGATTATA AAGTTAGTGG TTTAATGTTA ATAATTCAAT TTCTTGGGGG 9752 ||||| |||| ||| |||||| || | |||| || ||| | | ||||| |||| |||||| ||| TATTCTTGCT TATAATTATA AAAGTTGTGG TTGAATATAA ATAATCCAAT TTCTTGAGGG 703 TTAAAGGAGA CAACCTTGGA ATAAGTAATG GGTTACTTTT AGCATCTTTT ATACTTAATT 9812 |||||||||| |||||| | ||| || || ||||| |||| ||||| ||| |||||||| | TTAAAGGAGA TAACCTTAAA TTAATTAGTG GGTTA-TTTT GGCATCCTTT ATACTTAAAT 762 ATATGGTAAT TAAGGT-AAA ACAAAG-GGA TTTTGAAAGA GGAGAAAAT- TAAAAAAGAA 9869 |||||||||| || ||| ||| | |||| || |||| | | || ||| | ||| | | ATATGGTAAT TAGGGTAAAA AGAAAGAGGG GTTTGGATTA AGAAAAATTG TAAGCACCCA 822 AAAGAAAAAG AAGGGAGAAC GA-GCGAGAG GGAGAGAAGA -A-CGAA-GA GGAAAGCAAA 9925 || || | || | | ||| | |||||| |||| || | | || || ||||| |||| GGAG-AAGGG AAAGAAAAAC AATCCGAGAG AAAGAGGGGA TACCCAAGGA GGAAA-CAAA 880 GACCTTGAG- GAGTAGCTTG CGTGATCA-C GAATTCTTCG GTGGAGGTAG GTTATGGATT 9983 | | ||| | | | ||||| | ||| || | ||||||| | | | || G-CTTTGGGA AAATGGCTTG CTTGAACACC AAATTCTTGG GGGAAG.... .......... 925 ATGCTATAGT AAACTCTTAA TAGCGAATGA TATGTGTTGG GTAGTATTGT AAAGTCTTCT 10043 .......... .......... .......... .......... .......... .......... 925 ATATGCTTAA TTGTGTGCTT GCATGACGTG ATTATATAAT TGTGATAAAA TAAGCATGAT 10103 .......... .......... .......... .......... .......... .......... 925 GAGGCTGTTG AATCTTAAAC CTTAAAACCT CTTTGTTAAT GATGATACCT TGGTATAAAA 10163 .......... .......... .......... .......... .......... .......... 925 GAAGGCTTGA TGAACTGAAA GAATGAGAAT TAGGGGATCG GAGTGTCACA TTCCGACACC 10223 .......... .......... .......... .......... .......... .......... 925 AGGATAGTAT GGATCGGGTG TCACGTTCCG ACACCAGGAT AGTATGGATC GGGTGTCACG 10283 .......... .......... .......... .......... .......... .......... 925 TTCCGACACC AGGATAGTAT GGATCGGGTG TCACGTTCGA CACCAGGATA GTATGGATCG 10343 .......... .......... .......... .......... .......... .......... 925 AGTATCACGT TCCGACACCA GGATAGTAGA GGATCAGAGT GTCACGTTCC GACACCAGGA 10403 .......... .......... .......... .......... .......... .......... 925 TAGTATGGAT CGGGTGTCAC GTTTTGACAC CAGGATAGTA AAAAGAATGA ATCTTGAATT 10463 .......... .......... .......... .......... .......... .......... 925 ATGCTAATAT ACTCAAATTT AATGAACCTG TTTCCCAAAT GAGTATGGTG TGGAGGCTTG 10523 .......... .......... .......... .......... .......... .......... 925 AGTCCTCATA GATGTGCTTG GGTTGTGCCC AATGGTTATG GTACTTGTTG TTGTCACCTG 10583 .......... .......... .......... .......... .......... .......... 925 TTGAGTATTG TAGTTGATTT TATGTTATTA TCTGATGTAT ATTGTTTTCT ATTTTGAGTT 10643 .......... .......... .......... .......... .......... .......... 925 GGCCGATGAT ACCTACTCAG TACTTGTGCC TTGTACTGAC CCCTACTTGT ATGTTTCTTT 10703 .......... .......... .......... .......... .......... .......... 925 CTTTGTTATT TGTGGAGTGC AACAAACGTG -CCAACAACT TCGACTCAAC CACAACTC-T 10761 |||||||| || | || || | | | |||||| | .......... .......... ..CAAACGTG CCCGGTTTTT TCACCTAACC CGCAACTCTT 963 AGCCAGAC-T TCAGCATAAT CAGATTTCAG GGTGAGCTAT TG-TTCCTAG -CTCGGACTG 10818 |||||| | | | | | | ||||||| |||| |||| || || ||| || |||||| AGCCAGTCTT TTATTTCACC CCAATTTCAG GGTGGGCTAA TGCTTTTTAG CCTGGGACTG 1023 GATTCTTTCT TTC 10831 |||| || || ||| GATT-TTCCT TTC 1035 hqPGS_C08HBa0294K15.1+_SGN-U339541+ (9096 9969) ******************************************************************************** EST sequence 9 +strand 830 n (File: SGN-U343842+) 1 TTGGAACAAA AGCTCCTGCT CCACCGCGGT GGCGGCCGCT CTAGAACTAG TGGATCCCCC 61 GGGCTGCAGG AATTCGGCAC GAGCTGAGTC GACGGATCCC ACGACGGACC GTCATGAGCA 121 CGACGGACCG TGGAGGGTGT CTCGTTCCAA AACACTTAGA ATTCTGAAAT TTGGGTACTG 181 AGATCGACTC TCTGAACTTC GCGACGAAAT GGCACGACGG ACCGTCACAG GCATGACGGG 241 CTGTCACAAA CCCTTAGTGA AATTTAATCT CTGAACTTTG TGACGGAAGC AGCAGGACGG 301 ACCGTCGCAG GCACGACTGG TCGTCACAGA CTGCGTAACC CTGACTGGGT CGGATTTTTG 361 TTAAATGTTT TAAGGGGCGT TTTGGACTAT TCCTGCTTAT AATTATGAAA TTAGTGGTTT 421 AATGTTAATA ATTCAATTAC TTGGGGGGTT GAAGGAGATA ACCTTGAATT AATTAGCGGG 481 TTACTTTAGG TATCTTTCAT TCTTAATGAT ATGCTAATCA GGGTTAAAGA AAAAGGGTTT 541 GATTAAGACC AATACAACGA TCACAGGGAG GGAGGAACCA ACGATCCAAA AGACAGAACT 601 AAGACGAAAG CAGAACTTTA GAAAGTTAAC TTTTTGGATC ACAAATATCT TCCTTGGAGT 661 GGGTTATGGG TACTCCTTTT TCATGGGCAA CTCTTAATGG CCAATAAAAT GGTTTTGGAA 721 GGAATGGTAA ACCCTCCTTT ATCCTTAATT GGTGGTTCTG CCTAAGGGGA TTAATTATTG 781 GGGTTAAATA GGCCATAAGG GGCCTTATGA AACTAAATTT TTTAAACTTG Predicted gene structure (within gDNA segment 6014 to 15001): Exon 1 9423 10131 ( 709 n); cDNA 119 827 ( 709 n); score: 0.715 MATCH C08HBa0294K15.1+ SGN-U343842+ 0.715 709 0.854 C PGS_C08HBa0294K15.1+_SGN-U343842+ (9423 10131) Alignment (genomic DNA sequence = upper lines): CACGACGGAC CGTCGAGGGG GTCTCGTTCC AAAACACTTA G-TTTCTGAA AAATTGGGTA 9481 |||||||||| ||| ||||| |||||||||| |||||||||| | ||||| | || ||||||| CACGACGGAC CGTGGAGGGT GTCTCGTTCC AAAACACTTA GAATTCTG-A AATTTGGGTA 177 CTGAGAACAA CTCTCTGAAC TTCGCAATGG AAGAGCAGGA CGGACCGTCG TAGGCACGAC 9541 |||||| | | |||||||||| ||||| | | || ||| || ||||||||| ||||| ||| CTGAGATCGA CTCTCTGAAC TTCGCGACGA AATGGCACGA CGGACCGTCA CAGGCATGAC 237 GGACCGTCAC ATGGTCTTAA ATAAAAATTG AGTCTCTAAA CTCTGTGAC- GACTTAGCAG 9600 || | ||||| | ||| | | ||||| | ||||| || || |||||| || ||||| GGGCTGTCAC AAACCCTT-A GT-GAAATTT AATCTCTGAA CTTTGTGACG GAAGCAGCAG 295 GAC-GACCGT CGCAGGCACG AAGGACCGTC ACAGACTGCG TAACCCTGAC TGGGTCGGAT 9659 ||| |||||| |||||||||| | | |||| |||||||||| |||||||||| |||||||||| GACGGACCGT CGCAGGCACG ACTGGTCGTC ACAGACTGCG TAACCCTGAC TGGGTCGGAT 355 TTCTGTTAAA AGTTTTTAAG GGGTGTTTTG GATTATTCCT GCTTATGATT ATAAAGTTAG 9719 || ||||||| | ||||||| ||| |||||| || ||||||| |||||| ||| || || |||| TTTTGTTAAA TG-TTTTAAG GGGCGTTTTG GACTATTCCT GCTTATAATT ATGAAATTAG 414 TGGTTTAATG TTAATAATTC AATTTCTT-G GGGGTTAAAG GAGACAACCT TGGAATAAGT 9778 |||||||||| |||||||||| |||| ||| | |||||| ||| |||| ||||| || | ||| | TGGTTTAATG TTAATAATTC AATTACTTGG GGGGTTGAAG GAGATAACCT TGAATTAATT 474 AATGGGTTAC TTTTAGCATC TTTTATACTT AATTATATGG TAATTAAGGT AAAACAAAGG 9838 | ||||||| ||| | ||| ||| || ||| ||| ||||| |||| | ||| ||| ||| AGCGGGTTAC TTTAGGTATC TTTCATTCTT AATGATATGC TAATCAGGGT TAAAGAAAAA 534 GATTTTGAAA GAGGAGAAAA TTAAAAAAGA AAAAGAAAAA GAAGGGAGAA CGAGCGAGAG 9898 | |||| | | ||| | || || | || | || | || ||| | | | GGGTTTG-AT TA--AGACCA ATACAACGAT CACAGGGAGG GAGGAACCAA CGATCCA-A- 589 GGAGAGAAGA ACGAAGAGGA AAGCAAAGAC CTT-GAGGAG TAGCTTGCGT GATCACGAAT 9957 ||| ||| || |||| || ||||| | || || || || ||| |||||| ||| -AAGA-CAGA ACTAAGACGA AAGCAGA-AC TTTAGAAAGT TAACTTTTTG GATCACAAAT 646 -TCTTCGGTG GAGGTAGGTT AT-GG-A-T- -TATGCTATA GTAAACTCTT AATAGCGAAT 10011 ||||| || || || |||| || || | | | | || | ||||||| ||| || ||| ATCTTCCTTG GA-GTGGGTT ATGGGTACTC CTTTTTCATG GGCAACTCTT AATGGCCAAT 705 GATAT-GTGT TGGGTAGTAT TGTAAAGTCT TCTATATGCT TAATT-GTGT GCTTGCATGA 10069 | || || | ||| | || ||||| || || ||| || ||||| ||| ||| | | AAAATGGTTT TGGAAGGAAT GGTAAACCCT CCTTTATCCT TAATTGGTGG TTCTGCCTAA 765 CGTGATTATA TAATTGTGAT AAAATAAG-C ATGATGAGGC TGTTGAATCT TAAACCTTAA 10128 | ||||| | | |||| | | ||||| | | || | | | | | |||| || || || | GGGGATTA-A TTATTGGGGT TAAATAGGCC ATAAGGGGCC TTATGAAACT AAATTTTTTA 824 AAC 10131 ||| AAC 827 hqPGS_C08HBa0294K15.1+_SGN-U343842+ (9423 10131) ******************************************************************************** EST sequence 23 +strand 809 n (File: SGN-U335078+) 1 NTTGAAAACA AAAGCTGGAG CTCCACCGCG GTGGCGGCCG CTCTAGAACT AGTGGATCCC 61 CCGGGCTGCA GGAATTCGGC ACCAGCCCTA ATCTACTTTG TTAATAATGA TGCCTTGGTA 121 TAAAAGAAGG CTTGATGAAC GAAAGTGGTG AGATTAGGGG ATCGGGTGCC ACGTTCCGGT 181 ACCAGGATAG AATATGGATC GGGTGTCACG TTCCGACACC AGGATAGAAT ATGGATCGGG 241 TGCCACGTTC CGGTACCAGG ATAGAATATG GATCGGGTGT CACGTTCCGA CACCAGGATA 301 GAATATGGAT CGGGTGTCAC GTTCTGACAC CAGGATAGAA TATGGATCGG GTGCCACGTT 361 CCGGTGCCAG GATAGTATAT TGAGGAGTGG AGTGTCACGT AAGGACACGA GGGGAATAAA 421 TATGATGAAT CTTGAAATAT GTTAATATAT GCAATCCAAT GAACTAAATT CCCAAATAAG 481 TATGATGAGG AGGTGTGAGT CCTCATTGAT GTGCTTGGTG ATGCAACCAA GGGTTATGGT 541 AATTGCAAAT GCTGCATGCT AAGGATATTA GTTAATTTTA TGATATTGCT TAATACATAC 601 TGGTATCTAT TTTGAGTTGG CCGACGATGT CTACTCAATA CCCGTGTTTT GTACTGACCC 661 CTACTTTTAT TGTTACTTCC TGGGTATTTG GGGAGAGCAG CAAACGTGCC GTCACCTTAT 721 ACTTCACCGT AACTCAAGGC TGGCTTTACT ACAATGGAAA ATTCAGGGGG GGCTGATGTT 781 TCCTACTGGG ACTTGGACAT TTTTTTTTG Predicted gene structure (within gDNA segment 6952 to 15781): Exon 1 10134 10830 ( 697 n); cDNA 96 806 ( 711 n); score: 0.734 MATCH C08HBa0294K15.1+ SGN-U335078+ 0.734 697 0.862 C PGS_C08HBa0294K15.1+_SGN-U335078+ (10134 10830) Alignment (genomic DNA sequence = upper lines): CTTTGTTAAT GATGATACCT TGGTATAAAA GAAGGCTTGA TGAACTGAAA G-AATGAGAA 10192 |||||||||| ||||| ||| |||||||||| |||||||||| ||||| |||| | |||| | CTTTGTTAAT AATGATGCCT TGGTATAAAA GAAGGCTTGA TGAAC-GAAA GTGGTGAG-A 153 TTAGGGGATC GGAGTGTCAC ATTCCGACAC CAGGATAG-- TATGGATCGG GTGTCACGTT 10250 |||||||||| || ||| ||| ||||| || |||||||| |||||||||| |||||||||| TTAGGGGATC GG-GTGCCAC GTTCCGGTAC CAGGATAGAA TATGGATCGG GTGTCACGTT 212 CCGACACCAG GATAG--TAT GGATCGGGTG TCACGTTCCG ACACCAGGAT AG--TATGGA 10306 |||||||||| ||||| ||| |||||||||| ||||||||| |||||||| || |||||| CCGACACCAG GATAGAATAT GGATCGGGTG CCACGTTCCG GTACCAGGAT AGAATATGGA 272 TCGGGTGTCA CGTT-CGACA CCAGGATAG- -TATGGATCG AGTATCACGT TCCGACACCA 10363 |||||||||| |||| ||||| ||||||||| ||||||||| || |||||| || ||||||| TCGGGTGTCA CGTTCCGACA CCAGGATAGA ATATGGATCG GGTGTCACGT TCTGACACCA 332 GGATAGTAGA -GGATCAGAG TGTCACGTTC CGACACCAGG ATAG--TA-T --GGA-TCGG 10416 |||||| | | ||||| | | || ||||||| || ||||| |||| || | ||| | | GGATAGAATA TGGATC-GGG TGCCACGTTC CGGTGCCAGG ATAGTATATT GAGGAGTGGA 391 GTGTCACGTT TTGACACCAG GATAGTAAAA AGAATGAATC TTGAATTATG CTAATATACT 10476 ||||||||| ||||| || | | |||| | ||||||| ||||| |||| ||||||| | GTGTCACGTA AGGACACGAG GGGAATAAAT ATGATGAATC TTGAAATATG TTAATATA-T 450 CAAATTTAAT GAACCTGTTT CCCAAATGAG TATGGTGTGG AGGCTTGAGT CCTCATAGAT 10536 ||| ||| |||| || ||||||| || |||| || || ||| ||||| |||||| ||| GCAATCCAAT GAACTAAATT CCCAAATAAG TATGATGAGG AGGTGTGAGT CCTCATTGAT 510 GTGCTTGG-G TTGTGCCCAA TGGTTATGGT ACTTGTTGTT GTCACCTGTT GAGTATTGTA 10595 |||||||| | || |||| ||||||||| | ||| | | | || | || || || GTGCTTGGTG ATGCAACCAA GGGTTATGGT AATTGCAAAT GCTGCATGCT AAGGATATTA 570 GTTGATTTTA TGTTATTATC TGATGTATAT TGTTTTCTAT TTTGAGTTGG CCGATGATAC 10655 ||| |||||| || |||| | || ||| || | ||||| |||||||||| |||| ||| GTTAATTTTA TGATATTGCT TAATACATAC TGGTATCTAT TTTGAGTTGG CCGACGATGT 630 CTACTCAGTA CTTGTGCCTT GTACTGACCC CTACTTGTAT GTTTCTTTCT TTGTTATTTG 10715 ||||||| || | ||| || |||||||||| |||||| ||| || ||| | | |||||| CTACTCAATA CCCGTGTTTT GTACTGACCC CTACTTTTAT TGTTACTTCC TGGGTATTTG 690 TGGAGTGCAA CAAACGTGCC AACAACTTCG ACTCAACCAC AACTCTAGCC AGACTTCAGC 10775 |||| ||| |||||||||| || ||| ||| ||| ||||| || | | ||| | GGGAGAGCAG CAAACGTGCC GTCACCTTAT ACTTCACCGT AACTCAAGGC TGGCTTTACT 750 ATAAT-CAGA TTTCAGGGTG AGCTATTGTT CCTAGCTCGG ACTGGATTCT TTCTTT 10830 | ||| | | ||||||| | ||| |||| | || || ||| | | || ||| ACAATGGAAA ATTCAGGGGG GGCTGATGTT TCCTACTGGG ACTTGGACAT TTTTTT 806 hqPGS_C08HBa0294K15.1+_SGN-U335078+ (10134 10830) ******************************************************************************** EST sequence 36 +strand 888 n (File: SGN-U315286+) 1 TAATGAACTA AATTCCCAAA TGAGTATGAT GAGGAGGTGT GAGTCCTCAT TGATGTGCTT 61 GGTGTTGTAA CCAAGGGTTA TGGTAACTAT AAATGCTGCA TGTTAAGGAT ATTAGTTGAT 121 TTTATGATAT TGCTTAATAC ATACTGTTCC CTATTTTGAG TTGGCCGATG ATATCTACTC 181 AGTAGCCGTG TTTTGTACTG ACCCCTACTT TTATGTTTTT CTTCTTGTTA TTTGTGGAGT 241 GCAGCAAACG TGCCGTCATC TTCGACTCAA CAGTAACTCA AGCCAGTCTT CGTCACACCG 301 GATCTTCAGG GTGAGCTAAC GCTTCTAGCT TGGACTGGAT CTTCTCCTTC ATGTCTTGAT 361 GCCTTGAACT TCCGGCATGG ACTAGCTTCT TATGTAATTT TTTAGCTTCT TAGAAACTCT 421 TAGAATTAGT AGTTTAAAGT AGATGTTCTT GTGATGATGA CTTCCAGGTT TTGGGAATAA 481 TAGATGTTTA ATAATAGTAG TTATTGATTT TATTAATGAG TTTAAGTCTT CCGCATTACT 541 TTCTGTTGCT ATTACATTGA AATGTTAAGG TTTAGATTGG TTGGTTCGCT CACATAGGAG 601 GGTAAGTGTG GGTGCCAGTG GCGGCCCGGA TTTGGGTCGT GACAAAACTT GGTATCAGAG 661 CATTAGGTTC GTTGGTCTCA TCACACAAGA ACAAGTCTAG TAGAGTCTTA AGGAACGGTA 721 GGGGGACGCT TTTACTTTTC CTTGAGAGGC TATAAGACTT TAGGAAAACT TCACTCTTTC 781 ATTCTTTCTT TCGTGCTACT ACTTCGAGTC AATTGGTATC TAAGCGATAC GAATTGGTAT 841 CTGACCATNC TCACTCTCTT GCCAGATGGG TAGAACTAGA GCAACGAC Predicted gene structure (within gDNA segment 8154 to 15024): Exon 1 10483 11134 ( 652 n); cDNA 1 648 ( 648 n); score: 0.785 Intron 1 11135 11815 ( 681 n); Pd: 0.000 (s: 0.81), Pa: 0.589 (s: 0) Exon 2 11816 11839 ( 24 n); cDNA 649 671 ( 23 n); score: 0.667 Intron 2 11840 14199 (2360 n); Pd: 0.000 (s: 0), Pa: 0.625 (s: 0) Exon 3 14200 14206 ( 7 n); cDNA 672 678 ( 7 n); score: 0.714 MATCH C08HBa0294K15.1+ SGN-U315286+ 0.785 683 0.769 C PGS_C08HBa0294K15.1+_SGN-U315286+ (10483 11134,11816 11839,14200 14206) Alignment (genomic DNA sequence = upper lines): TAATGAACCT GTTTCCCAAA TGAGTATGGT GTGGAGGCTT GAGTCCTCAT AGATGTGCTT 10542 |||||||| |||||||| |||||||| | | ||||| | |||||||||| ||||||||| TAATGAACTA AATTCCCAAA TGAGTATGAT GAGGAGGTGT GAGTCCTCAT TGATGTGCTT 60 GG-GTTGTGC CCAATGGTTA TGGTACTTGT TGTTGTCACC TGTTGAGTAT TGTAGTTGAT 10601 || ||||| |||| ||||| ||||| | | || | |||| || || |||||||| GGTGTTGTAA CCAAGGGTTA TGGTAACTAT AAATGCTGCA TGTTAAGGAT ATTAGTTGAT 120 TTTATGTTAT TATCTGATGT ATATTGTTTT CTATTTTGAG TTGGCCGATG ATACCTACTC 10661 |||||| ||| | | || ||| |||| |||||||||| |||||||||| ||| |||||| TTTATGATAT TGCTTAATAC ATACTGTTCC CTATTTTGAG TTGGCCGATG ATATCTACTC 180 AGTACTTGTG CCTTGTACTG ACCCCTACTT GTATGTTTCT TTCTTTGTTA TTTGTGGAGT 10721 |||| ||| |||||||| |||||||||| ||||||| | | |||||| |||||||||| AGTAGCCGTG TTTTGTACTG ACCCCTACTT TTATGTTTTT CTTCTTGTTA TTTGTGGAGT 240 GCAACAAACG TGCCAACAAC TTCGACTCAA CCACAACTCT AGCCAGACTT CAGCATAATC 10781 ||| |||||| |||| || | |||||||||| | ||||| |||||| ||| | || | | GCAGCAAACG TGCCGTCATC TTCGACTCAA CAGTAACTCA AGCCAGTCTT CGTCA-CACC 299 AGAT-TTCAG GGTGAGCTAT TGTTCCTAGC TCGGACTGGA TTCTTTCTTT CAGGTCTTGA 10840 ||| ||||| ||||||||| | | ||||| | |||||||| | | || || || ||||||| GGATCTTCAG GGTGAGCTAA CGCTTCTAGC TTGGACTGGA TCTTCTCCTT CATGTCTTGA 359 TGTCTTGAAG TTCGGACATG GACCATC-TC TTTTAT-TTA TTTTAGCTTC TTAGATACTC 10898 || |||||| ||| | |||| ||| | | || || | | | |||||||||| ||||| |||| TGCCTTGAAC TTCCGGCATG GACTAGCTTC TTATGTAATT TTTTAGCTTC TTAGAAACTC 419 TTAGATTTAG TAATTTGAGG ATAGATGTTC TTGTGATGAT GACTTCCAGA TTTTGGGGAT 10958 ||||| |||| || ||| | | ||||||||| |||||||||| ||||||||| ||||||| || TTAGAATTAG TAGTTTAAAG -TAGATGTTC TTGTGATGAT GACTTCCAGG TTTTGGGAAT 478 AATGATAAGT TCTGAGTTTT AGAAGTTAAT TATTGATTTC GTTAATGAGT TTTAAGTTTT 11018 ||| | | || | | | | | || || | ||||||||| |||||||| ||||||| || AAT-AGATGT T-T-A---AT AATAG-TAGT TATTGATTTT ATTAATGAG- TTTAAGTCTT 530 CCGCATTATA TTCTGTT-TA ATATTGTTGA AATGTTGGGG TTTAGATTGG TTGGTTCTCT 11077 |||||||| ||||||| || |||| |||||| || |||||||||| ||||||| || CCGCATTACT TTCTGTTGCT ATTACATTGA AATGTTAAGG TTTAGATTGG TTGGTTCGCT 590 CACATAGGAG GGTAAGTGTG GGTGCCACTC ACGGCTC-GT TTTGGGTCGT GACAACTCAT 11136 |||||||||| |||||||||| ||||||| | |||| | | |||||||||| ||||| | CACATAGGAG GGTAAGTGTG GGTGCCAGTG GCGGCCCGGA TTTGGGTCGT GACAAAAC.. 648 CTATGCCCTA CCATTTAAAA TAACCCAGTA GAAAGTGGCA AAGATTATTT GTTCATTTTT 11196 .......... .......... .......... .......... .......... .......... 648 TACATGTAAA ATTGAATTTT ATTTCGGAGG TTCTTTACTT GGGTGTGTTA TTTTTATTTC 11256 .......... .......... .......... .......... .......... .......... 648 AAAATTTTAT TTTTTTAAAT TAAAATATAG TGATGTGGTC AAAATATAAT TGACCACGTG 11316 .......... .......... .......... .......... .......... .......... 648 TAAAAAAATA ATTTTACAAC ATCAGTGTTA AAAAATAATG GTATGAATGA GCCTTTTCTT 11376 .......... .......... .......... .......... .......... .......... 648 AAACGGTAAT GGCATTAATG AGTCAAACTT TTAACAAATG ATATAAATAA GTTGTTTCTG 11436 .......... .......... .......... .......... .......... .......... 648 AAATTCAATG GCATATTTGA GATTTTCACT TAATTTAATA AAAGAAAAAT TGCATGTAAT 11496 .......... .......... .......... .......... .......... .......... 648 TTCTGCAAGT TTTTGACTAG TCATTTCATT TTAGGTTTGA CTTTAGTCAT GATTGAATTT 11556 .......... .......... .......... .......... .......... .......... 648 TATTTTATTC AAATATAATA CAAAAGAAAA AGAAAATAGG AGTATAGTAA AGTGTAGTTG 11616 .......... .......... .......... .......... .......... .......... 648 TCTTTTGTGA CTTTGGTCCG CCCACCTGCT GCTTATTCCC TCCGAGCCAT GATAATAATA 11676 .......... .......... .......... .......... .......... .......... 648 ATATGCGAAG TTTAAAAGCC CCCTCAACCT ATACCCGAAA TTCCAACTAC ACACTCTAAC 11736 .......... .......... .......... .......... .......... .......... 648 TTCACGGGTG TCGCATTACC CATCTAAGCT ATATTTTTAT TTATTTTTTA CCCACCTAAG 11796 .......... .......... .......... .......... .......... .......... 648 TGCTGACCTA TCATTGGAGG TGTTATCACC GCCTCTAGGC GCGTTTGAAG CAAAATTTGA 11856 || ||||| || | |||| || .......... .........T TGGTATCAGA GCAT-TAGGT TCG....... .......... 671 TGAAAATTTT CCCCCTTCTC CTATAGTCAT CTTCCCCACT TTTAAATACT CATTACTTCT 11916 .......... .......... .......... .......... .......... .......... 671 TCTTCGCCCA CCATTAATCC TTGTTTCTTT AGTAAAAAAT TCACGAATTC CTCTCAAAAT 11976 .......... .......... .......... .......... .......... .......... 671 GAAGTAGGGT TTAGTTGTTA ATGTTCATTT GTACTTCAAA TCTTGAATTT AAGGTTTGTA 12036 .......... .......... .......... .......... .......... .......... 671 ATCTGATCTA ATTTCTTATT TAGATTTCTA ATTAGAAGTT TGAATTTTCT CGAAATTCAT 12096 .......... .......... .......... .......... .......... .......... 671 TAAAAATGAC AAATGAAAAC TTGAATACGC TTTATATGGA TGAATCAGAC CCAATGCCCA 12156 .......... .......... .......... .......... .......... .......... 671 ACGTTGTAGT GAGATGCAAA CACGAAATTT TTGTTGAATT TGCAAACTTC TTGGTCGAAA 12216 .......... .......... .......... .......... .......... .......... 671 TTAAATCCGG AAAGAAGATT TGGTGATATC ACTTGATAAT GCAGAATCGT CTGATGTAAA 12276 .......... .......... .......... .......... .......... .......... 671 TGCTCTTACT TTTGATGATG CAGAATCGTT TAATGATAAC CAAAAGTGGA GTAGGAGATG 12336 .......... .......... .......... .......... .......... .......... 671 AAAAGAGGGT TTTTGAAATT TTCTTGCTTC CTTTGTTCTT CTTTCAGTTT AGGGAGAAAT 12396 .......... .......... .......... .......... .......... .......... 671 GGGGGGGGGG GGGGGGTAGC AAGAAAATGG AGAAAAAAAG CAGGAGTTTC TAGTTGTGGG 12456 .......... .......... .......... .......... .......... .......... 671 TCCCATCGCG TGGAATCACG CAGCTTGACT TATTTGGTTT ATGTGTTGAG GTCAGCACTC 12516 .......... .......... .......... .......... .......... .......... 671 AGATGCGTAG AAAATAGATA AAAATATAGC TTAGGTGGGT AATGAAACAC CCGTGAAGTT 12576 .......... .......... .......... .......... .......... .......... 671 GGAGTGTGTA GTTGGGATTG AGGGTATAGG TTGGGGGGCT ATTGATCATT TTCTGTAAGT 12636 .......... .......... .......... .......... .......... .......... 671 AAAGCTTAGG AAGATTCAAT ATACACAAAT TATATTATTA CTTGTGGAAG GTAGAGAGGT 12696 .......... .......... .......... .......... .......... .......... 671 TTTCAAAAAA CCTTTGGTTC AAATGTAGCA AATTCAGAAT TATTTTCCTA AAATAAAGAA 12756 .......... .......... .......... .......... .......... .......... 671 AAAATAATCC AAAGTCTATC AAAAGAAAGT AACAACAACA ATAAAATAAT ATAATTATCG 12816 .......... .......... .......... .......... .......... .......... 671 GTACACAATA AAAAACATAT AATAGGATAA ATTATTGAAA AAATGATAAA CAATGACAAA 12876 .......... .......... .......... .......... .......... .......... 671 TCTCAAAAAG AAGAACTAAG TAATACAACT AATGCAATAA CATACACCAG TCACTTTAAG 12936 .......... .......... .......... .......... .......... .......... 671 AGCATCTCCA ATTCAAACAC CAAATTTTAC ATTAAATTTG GTGTCAACAT CAAATTTAGT 12996 .......... .......... .......... .......... .......... .......... 671 GTAATCAACT TTGACCCACT GCACTAAATT TTACACTAAA AAAGACTATT ATTAATTTAT 13056 .......... .......... .......... .......... .......... .......... 671 TATTTCTTGT TTCATTTAAA TTTTCTTTTT TCATAAAACA AATTAATTAT TTCTAAAACA 13116 .......... .......... .......... .......... .......... .......... 671 TTCACTATAT ATAATTCATA TTATTTCCTC TTATAATGGT TTAGTATAAA ATTATTTTGT 13176 .......... .......... .......... .......... .......... .......... 671 ACCATCATTT TTAAATAATA TGAATTGCTA TTATACGTTA TACATAAAAT GGATAATACA 13236 .......... .......... .......... .......... .......... .......... 671 AATAAAAGTG AAATCATTAA AGAAATACAA TTGAATAAAC ATTATATAAT TTGAAAAATT 13296 .......... .......... .......... .......... .......... .......... 671 ATTTTAAATT CTACATAAAT ATTTTTCAAA ATCACTACGG TGCTCCCATA AATGTTCTAT 13356 .......... .......... .......... .......... .......... .......... 671 TAATGCATTA CGTAGTTCAA AATGAAACAT AGAGCTTTGA AATTTAAAGA ATTTAAAGAA 13416 .......... .......... .......... .......... .......... .......... 671 TAAAATAAAA TTATATCAAT GAATGTGGAT AGTATTGCTT ATCCAAATGT TCATGAATTT 13476 .......... .......... .......... .......... .......... .......... 671 GTTCAACAAT AACAAAGTCG AATAATGATA AATAAAAAAA AGCCAACAAT TTCAACAGCC 13536 .......... .......... .......... .......... .......... .......... 671 GCATCCACAA TCAAAATAAT TTTTGACCCC ATACAATTCA TATTTTAATA GTATTAATGA 13596 .......... .......... .......... .......... .......... .......... 671 ATCCAAAAAG AATCTATCAT ATTATTAAGT TATTATTATA ATTTTTAGAA AATATTATGT 13656 .......... .......... .......... .......... .......... .......... 671 TTTGTTGTAC TTTTTAAAAT TATTATGTAT TTTATATTTC AATTTTAATG TATGTCAATT 13716 .......... .......... .......... .......... .......... .......... 671 ACTGCTTTGT TCAATGTTTA TTATTTTTGG TTATTTCTTA AGTATGTTGT ATTATTTGAT 13776 .......... .......... .......... .......... .......... .......... 671 TAAAAATTTA TGTTTGTATT TTTAAATTTT GTGAAGGTTA ATTGTAGTTT ATATAAGTTA 13836 .......... .......... .......... .......... .......... .......... 671 TAGTAGAATT AACATAAATT TAATTTTTTA ATAAAGTCAT ATATAGAAAA AAATAATTTA 13896 .......... .......... .......... .......... .......... .......... 671 TAAAAAAATA AATTTTATAT ATCTAAAATT AATATTATAA AAATATTGCA CAAAAAATAA 13956 .......... .......... .......... .......... .......... .......... 671 TTAAACATAC AAGAGATTTA ATTAAAACAT AGAATTTATA TTTTGTTAAA TCAAGAGTTT 14016 .......... .......... .......... .......... .......... .......... 671 GTATAATGAA ATAAAATATT ATAATATTTA AAGTGGACTA GCGTGATGAA TAGTGTTACA 14076 .......... .......... .......... .......... .......... .......... 671 CCAAGTTTGG TGTAACACTA TTCACACACC AAATCTGGTG TGAACTGGTG TTGGTTGGAG 14136 .......... .......... .......... .......... .......... .......... 671 TTCAAAACAC CAAATTTTAC ACCAAATATA GAACTTGATG TAAAATTTGG TGTTGGGTTG 14196 .......... .......... .......... .......... .......... .......... 671 AAGATGGACT 14206 ||| || ...TTGGTCT 678 hqPGS_C08HBa0294K15.1+_SGN-U315286+ (10483 11134) ******************************************************************************** EST sequence 30 +strand 647 n (File: SGN-U315283+) 1 ACGCCTTTTG CTTTATGAAA CTAAAAAATA AAAATTGAAG TTTTGAAACG ATAGAGGTTT 61 AAAATTTGAA AGTCTGCTTA GAGAGTTAAG GCTTAGAAAG TTTAACTAAG ACGGAATCTT 121 AAAAGATTAA TATCTCAAAT TTGCAAAGTT TGGCTAAGTA AATCGTGATA AAAGTTCAAA 181 TAAATTTGCA AAGGGTAAAA ATAAAAATAA TCAAATAAGT TAGTCGTTGG AAAACCGTAT 241 TTAACGGAGT GTCTTAGGTG CCTTAAACAC CTTCCTAAGA CGCTAATAAG AATCCCGAAT 301 CCTAAAAAAT ATTTTCAAAA CGACTTTTCT GTTTAAATTG TTTTGAGAAT GAGTTTTCTT 361 GATTTTTCTT AAAAATTAAG TGGCGACTCC TAAAGTCGAA AAATACTTTA AAATAAAACA 421 AACTCTTTTC GAAAAATCAC CTTTTTTCGA TAAAACAAAG CTTCTAGCTT GGACTGGATC 481 TTCTTCTTCA TGTCTTGATG CCTTGAAGTT CCGGCATGGA CTAGCTGTTT ATGTATTTTA 541 GCTTCTTAGA TACTCTTAGA TTTAGTAATT CGAAGTAGAT GTTCTTGTGA TGATAACTTC 601 CAGATTTTGG GAAATAATAG TTATTGAATT GGTTTTTATA AAAAAAA Predicted gene structure (within gDNA segment 4947 to 11925): Exon 1 9828 9837 ( 10 n); cDNA 451 460 ( 10 n); score: 1.000 Intron 1 9838 10802 ( 965 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.80) Exon 2 10803 10955 ( 153 n); cDNA 461 611 ( 151 n); score: 0.863 MATCH C08HBa0294K15.1+ SGN-U315283+ 0.863 163 0.252 C PGS_C08HBa0294K15.1+_SGN-U315283+ (9828 9837,10803 10955) Alignment (genomic DNA sequence = upper lines): TAAAACAAAG GGATTTTGAA AGAGGAGAAA ATTAAAAAAG AAAAAGAAAA AGAAGGGAGA 9887 |||||||||| TAAAACAAAG .......... .......... .......... .......... .......... 460 ACGAGCGAGA GGGAGAGAAG AACGAAGAGG AAAGCAAAGA CCTTGAGGAG TAGCTTGCGT 9947 .......... .......... .......... .......... .......... .......... 460 GATCACGAAT TCTTCGGTGG AGGTAGGTTA TGGATTATGC TATAGTAAAC TCTTAATAGC 10007 .......... .......... .......... .......... .......... .......... 460 GAATGATATG TGTTGGGTAG TATTGTAAAG TCTTCTATAT GCTTAATTGT GTGCTTGCAT 10067 .......... .......... .......... .......... .......... .......... 460 GACGTGATTA TATAATTGTG ATAAAATAAG CATGATGAGG CTGTTGAATC TTAAACCTTA 10127 .......... .......... .......... .......... .......... .......... 460 AAACCTCTTT GTTAATGATG ATACCTTGGT ATAAAAGAAG GCTTGATGAA CTGAAAGAAT 10187 .......... .......... .......... .......... .......... .......... 460 GAGAATTAGG GGATCGGAGT GTCACATTCC GACACCAGGA TAGTATGGAT CGGGTGTCAC 10247 .......... .......... .......... .......... .......... .......... 460 GTTCCGACAC CAGGATAGTA TGGATCGGGT GTCACGTTCC GACACCAGGA TAGTATGGAT 10307 .......... .......... .......... .......... .......... .......... 460 CGGGTGTCAC GTTCGACACC AGGATAGTAT GGATCGAGTA TCACGTTCCG ACACCAGGAT 10367 .......... .......... .......... .......... .......... .......... 460 AGTAGAGGAT CAGAGTGTCA CGTTCCGACA CCAGGATAGT ATGGATCGGG TGTCACGTTT 10427 .......... .......... .......... .......... .......... .......... 460 TGACACCAGG ATAGTAAAAA GAATGAATCT TGAATTATGC TAATATACTC AAATTTAATG 10487 .......... .......... .......... .......... .......... .......... 460 AACCTGTTTC CCAAATGAGT ATGGTGTGGA GGCTTGAGTC CTCATAGATG TGCTTGGGTT 10547 .......... .......... .......... .......... .......... .......... 460 GTGCCCAATG GTTATGGTAC TTGTTGTTGT CACCTGTTGA GTATTGTAGT TGATTTTATG 10607 .......... .......... .......... .......... .......... .......... 460 TTATTATCTG ATGTATATTG TTTTCTATTT TGAGTTGGCC GATGATACCT ACTCAGTACT 10667 .......... .......... .......... .......... .......... .......... 460 TGTGCCTTGT ACTGACCCCT ACTTGTATGT TTCTTTCTTT GTTATTTGTG GAGTGCAACA 10727 .......... .......... .......... .......... .......... .......... 460 AACGTGCCAA CAACTTCGAC TCAACCACAA CTCTAGCCAG ACTTCAGCAT AATCAGATTT 10787 .......... .......... .......... .......... .......... .......... 460 CAGGGTGAGC TATTGTTCCT AGCTCGGACT GGATTCTTTC TTTCAGGTCT TGATGTCTTG 10847 | || |||| ||||| |||| | | |||| |||| ||||| |||| .......... .....CTTCT AGCTTGGACT GGATCTTCTT CTTCATGTCT TGATGCCTTG 505 AAGTTCGGAC ATGGACCATC TCTTTTATTT ATTTTAGCTT CTTAGATACT CTTAGATTTA 10907 |||||| | | |||||| | | | ||||| | |||||||||| |||||||||| |||||||||| AAGTTCCGGC ATGGACTAGC T-GTTTATGT ATTTTAGCTT CTTAGATACT CTTAGATTTA 564 GTAATTTGAG GATAGATGTT CTTGTGATGA TGACTTCCAG ATTTTGGG 10955 |||||| || | |||||||| |||||||||| | |||||||| |||||||| GTAATTCGAA G-TAGATGTT CTTGTGATGA TAACTTCCAG ATTTTGGG 611 hqPGS_C08HBa0294K15.1+_SGN-U315283+ (10803 10955) ******************************************************************************** EST sequence 59 -strand 737 n (File: SGN-U313613-) 1 GAAATAAGCA GGGTAAACGC GGAAAGCTAG CAAAGCAAAC CTCAAAAGAC CACGAGTATG 61 AAAGACAACG AGAAATATAC CAAAAGACAC AAAGATTTAA CGTGGTTCGG TCAATCGACC 121 TACGTCCACA ATGGAGATGA GCAATCCACT ATTAATATGA GAGTACAAAA TACAGAGAGA 181 AACAACCTCA ACCAATTCAC TAAGAATACA CGGGAACATT TTCCTACCAG AAAAAGAATT 241 AGTCAATTCA AAACTTTTTT CCTAAAAGAA AAACCTATTT ATGATAAGAA ATTTAGGACA 301 AAATAAAATC CAACATAAAT GATGTAATTA TACAATTCAT ATCATCAGAC AATGGTTCAT 361 GGATCCAAAA TCTTGAATGA TTCCATTTTG GTTTGAGCTC AAACATCACC ATCTATATAA 421 CTAAAACTCG TCGAAATTGA CTCAACCTGC TCATCTGACA CTTGAAAATT CGAGACTCAA 481 ATTTAATCAT TAAGATGAAT TTTGTGAATT TAAATACCTT TTGCACGAAA TGTACGCTGA 541 TAAAGCATTT TAAGTGTTTT TGAGGAGTAG CAGACGAAGC AATAGCGGAT GGTAATGGTG 601 ATGGACAATC ATTGATCCTT AACGAAGTTG CTCGAATTCC TTCAGAAATT TCCTCCATAG 661 TAAATTGTGA TTTGATTAAT TATTGGCTCA AATAAACAAG AAAATGGATG AACAAGAACT 721 AATTAAGCAT GTTTATG Predicted gene structure (within gDNA segment 20107 to 27289): Exon 1 20924 21137 ( 214 n); cDNA 1 216 ( 216 n); score: 0.890 Intron 1 21138 21271 ( 134 n); Pd: 0.699 (s: 0.84), Pa: 0.000 (s: 0.81) Exon 2 21272 21384 ( 113 n); cDNA 217 331 ( 115 n); score: 0.810 MATCH C08HBa0294K15.1+ SGN-U313613- 0.862 327 0.444 C PGS_C08HBa0294K15.1+_SGN-U313613- (20924 21137,21272 21384) Alignment (genomic DNA sequence = upper lines): GAAATAAGAA GGTGTAAACG CGG-AAGCTA GCAAAGCAAA CCTCAAAAGA CCACGAGTAA 20982 |||||||| | || ||||||| ||| |||||| |||||||||| |||||||||| ||||||||| GAAATAAGCA GG-GTAAACG CGGAAAGCTA GCAAAGCAAA CCTCAAAAGA CCACGAGTAT 59 G-AATA-AAC GAGAAATATA TCAAAAGACA CAAAGATTTA ACGTGATTCG GTCAATCGAC 21040 | || | ||| |||||||||| ||||||||| |||||||||| ||||| |||| |||||||||| GAAAGACAAC GAGAAATATA CCAAAAGACA CAAAGATTTA ACGTGGTTCG GTCAATCGAC 119 CTACGTCCAC AAAGGAGATG AGCAATCCAC TATAAATATG AGAGTACAAA ATACAGAGAA 21100 |||||||||| || ||||||| |||||||||| ||| |||||| |||||||||| ||||||||| CTACGTCCAC AATGGAGATG AGCAATCCAC TATTAATATG AGAGTACAAA ATACAGAGAG 179 AAACAACCTC AATCAATTCA CTCGAAATAC ATGCGAGGTT CACAAGTGAT AACATATCAA 21160 |||||||||| || ||||||| || ||||| | | || AAACAACCTC AACCAATTCA CTAAGAATAC ACGGGAA... .......... .......... 216 GCTTGTAACC CATAAATTCT CCACCTAACC AAAACTCTCA AAGCATTTAA GACTACATTG 21220 .......... .......... .......... .......... .......... .......... 216 TGAATGCTGA TTAAGTTAGA AGAAACATGC CTCTATTTAT AGAGTCCTAA ACTTTTTCCT 21280 | ||||||| .......... .......... .......... .......... .......... .CATTTTCCT 225 ACCAGAAAAA -TATTAGTCA TTCCAAAAC- TTTTTCCTAA AAGGAAAACC TATTTATGGT 21338 |||||||||| |||||||| | |||||| |||||||||| ||| |||||| |||||||| | ACCAGAAAAA GAATTAGTCA ATTCAAAACT TTTTTCCTAA AAGAAAAACC TATTTATGAT 285 AAGAAATTTA GGGC-AAATA ATATCCAACC TACATTACTG AATTTAT 21384 |||||||||| || | ||||| | ||||||| || || | || | |||| AAGAAATTTA GGACAAAATA AAATCCAACA TAAATGA-TG TAATTAT 331 hqPGS_C08HBa0294K15.1+_SGN-U313613- (20924 21137,21272 21384) ******************************************************************************** EST sequence 11 +strand 965 n (File: SGN-U334483+) 1 NNNNNNNNGG GGGAGGGGGG GCTTTTTNAA AGAAGAAGAA CGGGAGAATA CGCCGGGCCG 61 GCTGCTCTAG AACTAGTGGA TCCCCCCGGC TGCAGGAATT CGGCACCGGG ATTAGTCAAT 121 CCAAAATTTT TCCCTAAAAG GAAAACCTAT TTATGTTAAG AAATTATGGT AAATAAAATC 181 CAACAAATCT CCTCCCCCTT GGCCTGTATT TCTGACCAAA ATAAATTTCT CCACATTCTT 241 CATTTAATCT TCAACAACTT GCTTCTCTTC TTCTTAATCT CCTTTGTAAA ATTTATGTCT 301 CAACCATAGA AAACCTCTCT GAAACAATTT CTCCAACAAA ATCTTCATTA CTGTCAAAAA 361 GATTGCGGCT AGAACCTACC ACCTGTCAAG ATGAACCACC ACCCTCTTTC TAACCTGGTC 421 CAATAATCGA TTATCGAACC ACTGAACCTG ACCTCTGTCA TTAAATGGCT CTAATACCCA 481 CTTGTTAGGA TCGAAATAAG CAGGTGTAAA TGCGGAAGCT AGCAAAGCAA ACTTCGAAAG 541 ACCACGAGTA AGAAGACAAC GAGAAATATA CCAAAAGACA CCAAAGATTT AACGTGGTTC 601 GGTCAATCGA CCTACGTTCA CAAAGGAGAT GAGCAATCCA CTATAAATAT GAGAGTACAA 661 TATACAGAGA GAAACAACAT CAACCAATTC ATTCGGAATA TATGGGAGGT TCACATAAGT 721 GATAACATAT CTAGCTNGTG ACCTATAAAT TCGTCTATTT ATTGAATCAA GGCAAAATAA 781 ACCCTCGAGA GATATCGAAG GCCTCAAAAT TGTCTCTCAC TTTATTAGTG TCCTCTAAAA 841 TAACTTGCAT TCAAAAATTG GTGATTATTG TGTGAACCTA ATGATTTAAT GGACCATGAA 901 TTAAAATTAT AATTTTACCT CCTATAAGTA TTGCCCTCAA AAAAAAAAAA AAAAACTCAA 961 GGGGG Predicted gene structure (within gDNA segment 14457 to 24749): Exon 1 20912 21202 ( 291 n); cDNA 482 776 ( 295 n); score: 0.840 PPA cDNA 939 956 MATCH C08HBa0294K15.1+ SGN-U334483+ 0.840 291 0.302 C PGS_C08HBa0294K15.1+_SGN-U334483+ (20912 21202) Alignment (genomic DNA sequence = upper lines): TTGTTAGGAC CGGAAATAAG AAGGTGTAAA CGCGGAAGCT AGCAAAGCAA ACCTCAAAAG 20971 ||||||||| | |||||||| ||||||||| ||||||||| |||||||||| || || |||| TTGTTAGGAT C-GAAATAAG CAGGTGTAAA TGCGGAAGCT AGCAAAGCAA ACTTCGAAAG 540 ACCACGAGTA AGAATA-AAC GAGAAATATA TCAAAAGACA -CAAAGATTT AACGTGATTC 21029 |||||||||| |||| | ||| |||||||||| ||||||||| ||||||||| |||||| ||| ACCACGAGTA AGAAGACAAC GAGAAATATA CCAAAAGACA CCAAAGATTT AACGTGGTTC 600 GGTCAATCGA CCTACGTCCA CAAAGGAGAT GAGCAATCCA CTATAAATAT GAGAGTACAA 21089 |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| GGTCAATCGA CCTACGTTCA CAAAGGAGAT GAGCAATCCA CTATAAATAT GAGAGTACAA 660 AATACAGAGA AAAACAACCT CAATCAATTC ACTCGAAATA CATGCGAGGT TCAC--AAGT 21147 ||||||||| ||||||| | ||| |||||| | ||| |||| ||| ||||| |||| |||| TATACAGAGA GAAACAACAT CAACCAATTC ATTCGGAATA TATGGGAGGT TCACATAAGT 720 GATAACATAT CAAGCTTGTA ACCCATAAAT TC-TCCACCT AACCAAAACT CTCAAA 21202 |||||||||| | |||| || ||| |||||| || || | | | || |||| GATAACATAT CTAGCTNGTG ACCTATAAAT TCGTCTATTT ATTGAATCAA GGCAAA 776 hqPGS_C08HBa0294K15.1+_SGN-U334483+ (20912 21202) ******************************************************************************** EST sequence 6 +strand 542 n (File: SGN-U313612+) 1 GAAAAGAAAC TAAGTAGAGC TATGTATATT TTGTCTGCAG AAGCAATGGC TTAATTTACA 61 ACTATAGGTG GCGTACGTAT AATGCATGGA CCGAAAAATA AGCAGGTGTA AACGCGGAAG 121 CTAGCAATGC TAACATCGAA AGACCACGAG TAAGAAGACA ACGAGAAATA TACCAAAAGA 181 CACAAAGATT TAACGTGGTT CGGTCAATCG ACCTATGTCC ACAAAGGAGA TGAGCAATCC 241 ACTATAAATA TGAGAGTACA AAATACAGAG GGAAACAATC TCAACCAATT CACTCAGAAT 301 ACATGGGAGG TTCACACAAG TAATAACGTA TCAAGCTTGT GACCCACAAA TTCTCCCTCT 361 AACCAAAACT CTCAAAGCCC TTAAGACTAC ATTGTGAATG TTAACTAAGT TAAAAGGAAC 421 ATGCCTCTAT TTATAGAATC CTAAACCTTT CCCTACAAGA AAAGGATTAG TCAATCCAAA 481 ACCTTTTCCT ACAAGGAAAA TCTATTTATG GTAAGAAATT TAGAGCAAAT AAAACCCAAC 541 AA Predicted gene structure (within gDNA segment 19303 to 22923): Exon 1 20919 21366 ( 448 n); cDNA 89 540 ( 452 n); score: 0.882 MATCH C08HBa0294K15.1+ SGN-U313612+ 0.882 448 0.827 C PGS_C08HBa0294K15.1+_SGN-U313612+ (20919 21366) Alignment (genomic DNA sequence = upper lines): GACCGGAAA- TAAGAAGGTG TAAACGCGGA AGCTAGCAAA GCAAACCTCA AAAGACCACG 20977 ||||| ||| |||| ||||| |||||||||| ||||||||| || ||| || |||||||||| GACCGAAAAA TAAGCAGGTG TAAACGCGGA AGCTAGCAAT GCTAACATCG AAAGACCACG 148 AGTAAGAATA -AACGAGAAA TATATCAAAA GACACAAAGA TTTAACGTGA TTCGGTCAAT 21036 |||||||| | ||||||||| |||| ||||| |||||||||| ||||||||| |||||||||| AGTAAGAAGA CAACGAGAAA TATACCAAAA GACACAAAGA TTTAACGTGG TTCGGTCAAT 208 CGACCTACGT CCACAAAGGA GATGAGCAAT CCACTATAAA TATGAGAGTA CAAAATACAG 21096 ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGACCTATGT CCACAAAGGA GATGAGCAAT CCACTATAAA TATGAGAGTA CAAAATACAG 268 AGAAAAACAA CCTCAATCAA TTCACTCGAA ATACATGCGA GGTT--CACA AGTGATAACA 21154 || |||||| ||||| ||| ||||||| | ||||||| || |||| |||| ||| ||||| AGGGAAACAA TCTCAACCAA TTCACTCAGA ATACATGGGA GGTTCACACA AGTAATAACG 328 TATCAAGCTT GTAACCCATA AATTCTCCAC CTAACCAAAA CTCTCAAAGC ATTTAAGACT 21214 |||||||||| || ||||| | |||||||| |||||||||| |||||||||| |||||||| TATCAAGCTT GTGACCCACA AATTCTCCCT CTAACCAAAA CTCTCAAAGC CCTTAAGACT 388 ACATTGTGAA TGCTGATTAA GTTAGAAGAA ACATGCCTCT ATTTATAGAG TCCTAAACTT 21274 |||||||||| || | | ||| |||| ||| | |||||||||| ||||||||| |||||||| | ACATTGTGAA TGTTAACTAA GTTAAAAGGA ACATGCCTCT ATTTATAGAA TCCTAAACCT 448 TTTCCTACCA GAAAAATATT AGTCATTCCA AAACTTTTTC CTAAAAGGAA AACCTATTTA 21334 || ||||| | ||||| ||| ||||| |||| |||| ||||| ||| |||||| || ||||||| TTCCCTACAA GAAAAGGATT AGTCAATCCA AAACCTTTTC CTACAAGGAA AATCTATTTA 508 TGGTAAGAAA TTTAGGGCAA ATAATATCCA AC 21366 |||||||||| ||||| |||| |||| | ||| || TGGTAAGAAA TTTAGAGCAA ATAAAACCCA AC 540 hqPGS_C08HBa0294K15.1+_SGN-U313612+ (20919 21366) ******************************************************************************** EST sequence 60 -strand 845 n (File: SGN-U313614-) 1 CCCATATCAA CGGCTGGATT CAAGCTCTGC CCACAGTCGT AAATAATATC AGATTGCAAA 61 ATGGTAGTCT CTCCGGTCAG GATATCAATC TCCACCTCAC TGACAGCAGC ACCAAAGTTC 121 AAATAACTCG TAAAATCAGA TTCTGGTACA TAATAAGAAT TTGCTGCTAA GTTTACTGAT 181 TCCATTTGTG CCTGCAAAAA GAAGGGGGTG GAGGGACAGA ACTGCAAACT CAGATATGTT 241 AGGACCGAAA ATAAGCAGGT GTAAACGCGG AAGCTAGCAA TGCAAACCTC AAAAGACCAC 301 GAGTAAGAAG ACAACGAGAA ATATATCAAA AGACACAAAG ATTTAACGTG GTTCGGTCAA 361 TCGACCTACG TCCACAAAGG AGATGAGCAA TCCACTATAA ATATGAGAGT ACAAAATACA 421 GAGAGAAACA ACCTCAACCA ATTCACTCAG AATACATGGG AGGTTCACAC AAGTGATAAC 481 ATATCAAGCT TGTGACCCAC AGATTCTCCC TCTAACCAAA ACTCTCAAAG CCTGTAAGAC 541 TACATTGTGA ATGCTGATTA AGTTAAAAGG AATATTCATC TATTTATAGA GTCCTAAACC 601 TTTTCCTACA AGAAAAGGAT TAGTCAATTC AAAACCTTTT CCTAAAAGGA AAAGGATTAG 661 TCAATCCAAA ACCTTTTCCT ACAAGGAAAA CCTATTTATG GTAAGAAATT TAGGGCAAAT 721 AAAACCCAAC AAGTCTCCCC CTTGGCCTGA ATTTCTGACA AATAAACTTG TCCACCTTCT 781 TCACTTAATC TTCAACAACT TGCTTCTCCT CTCCATAATC TCCTTTGCAA AATTTATGTC 841 TCAAC Predicted gene structure (within gDNA segment 17763 to 23188): Exon 1 20919 21332 ( 414 n); cDNA 243 658 ( 416 n); score: 0.905 MATCH C08HBa0294K15.1+ SGN-U313614- 0.905 414 0.490 C PGS_C08HBa0294K15.1+_SGN-U313614- (20919 21332) Alignment (genomic DNA sequence = upper lines): GACCGGAAAT AAGAAGGTGT AAACGCGGAA GCTAGCAAAG CAAACCTCAA AAGACCACGA 20978 ||||| |||| ||| |||||| |||||||||| |||||||| | |||||||||| |||||||||| GACCGAAAAT AAGCAGGTGT AAACGCGGAA GCTAGCAATG CAAACCTCAA AAGACCACGA 302 GTAAGAATA- AACGAGAAAT ATATCAAAAG ACACAAAGAT TTAACGTGAT TCGGTCAATC 21037 ||||||| | |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| GTAAGAAGAC AACGAGAAAT ATATCAAAAG ACACAAAGAT TTAACGTGGT TCGGTCAATC 362 GACCTACGTC CACAAAGGAG ATGAGCAATC CACTATAAAT ATGAGAGTAC AAAATACAGA 21097 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCTACGTC CACAAAGGAG ATGAGCAATC CACTATAAAT ATGAGAGTAC AAAATACAGA 422 GAAAAACAAC CTCAATCAAT TCACTCGAAA TACATGCGAG GTT--CACAA GTGATAACAT 21155 || ||||||| ||||| |||| |||||| || |||||| ||| ||| ||||| |||||||||| GAGAAACAAC CTCAACCAAT TCACTCAGAA TACATGGGAG GTTCACACAA GTGATAACAT 482 ATCAAGCTTG TAACCCATAA ATTCTCCACC TAACCAAAAC TCTCAAAGCA TTTAAGACTA 21215 |||||||||| | ||||| | ||||||| | |||||||||| ||||||||| | |||||||| ATCAAGCTTG TGACCCACAG ATTCTCCCTC TAACCAAAAC TCTCAAAGCC TGTAAGACTA 542 CATTGTGAAT GCTGATTAAG TTAGAAGAAA CATGCCTCTA TTTATAGAGT CCTAAACTTT 21275 |||||||||| |||||||||| ||| ||| || || | |||| |||||||||| ||||||| || CATTGTGAAT GCTGATTAAG TTAAAAGGAA TATTCATCTA TTTATAGAGT CCTAAACCTT 602 TTCCTACCAG AAAAATATTA GTCATTCCAA AACTTTTTCC TAAAAGGAAA ACCTATT 21332 ||||||| || |||| |||| |||| | ||| ||| |||||| |||||||||| | ||| TTCCTACAAG AAAAGGATTA GTCAATTCAA AACCTTTTCC TAAAAGGAAA A-GGATT 658 hqPGS_C08HBa0294K15.1+_SGN-U313614- (20919 21332) ******************************************************************************** EST sequence 86 +strand 2030 n (File: SGN-U315924+) 1 GGCCAAAAAA TGGAGGTTAT GTAGAAACAT TTTGTTTTGG TACATGGTGC ATGCCATGGA 61 AGTTGGTGTT GGTACAAGCT AAAGCCATTG CTAGAGGCTG CTGGCCACAA GGTCACTGCC 121 CTTGACATGG CAGCCTCTGG CATTGATTTG AGAAAAATAG AAGAAATTCG CACACTTGTC 181 GATTATACCG CGCCATTGAT GGAGTTTATG GAATCCCTTC CACATGAGGA AAAGGTTGTA 241 CTAGTAGGGC ATAGTCTTGG TGGTATGAAT TTAGCACTTG CTATGGAAAA ATACCCAAAA 301 AAGATCTATG CTGCTGTTTT CTTGGCTGCT CTTATGCCTG ATTCTGCTCA CATGTCCTCC 361 TACGTTTTGG ATCAGCAATT TGAGAGGACG CCAACAAAGA ATTGGTGTGA CACCCAATTT 421 GTATCATATG GTTCCCCTGA AGAGCCTTTG ACATCCATAA TTTTGGATCC CAAGTTGTTG 481 GCTCACCGAT TTTATCAGTT ATGCTCTCCT GAGGATGTTG CGTTAGCATC GACATTAATA 541 AGACCAAGCT CTCAGTTTAT CGAAGATCTA TCGAAGGCAA AGTATTTCAC GGATGAAGGT 601 TATGGATCAG TAAACAAAGT TTATATAATG TTAGAATAGG TTTAGGTTTA CGTTTACTGG 661 GCTTAAGCCC ATTGTAATTA TGTAATTATA TATATTCGTT ATGCTAATGG AAAACCCCCA 721 AGCAGTTGCA ATTCTACTGC CATATACAAT TCTACATGGT ATCAGAGCCT GGACCGGGAA 781 TCAAATCCTA GCCGAGAGTC GACCATCGTC GTTGTCGACC ATCGTCGTTG TCGATCATCG 841 CCGTTGTCGA CCATTTGTCG ACCATCGTTT CTGCAGTATA TCGTCGCTGC CCATCTGCCT 901 GGTTTCCGCA GATCTTCTGA TCTGTACAGT CCAACTACTC GATCGCCACA GCTTCATAGA 961 AAATCATGAC TGTCGATTCC ACTGCGAAAA TTCGACCGAT TCATGATCCA AGCTCCGTCT 1021 ACTATTTGCA CCCGTCTGAA GGACCAAGTA ATTCTCTTAC TAAATACCTA CTGAAGGGAG 1081 ATAATTTTGA CGTTTGGGAG CGAGCTGTTT GTAACGCACT CGAAGGCAGA AGCAAGATTG 1141 GTTTTTTATA TGAAAAGGGA TTTCCAAAGC CCACGAACGA GTTGGAACTT GATGCCTGGA 1201 AAGCAAACAA CTCAATTATA TGTTCATGGA TTTTTAACAG TGCCGACGAG ACAATTCAGC 1261 CAAGTATCGT CTCTCACAAA ATTGCCCACG AATTATGGAC TGATATAACG GCAAGGTACG 1321 GAGGCACGAA TGCTCCAAAA TCGTGGCAAT TAAAGTCCGA TCTACAAATG TTAAGACAAA 1381 AAGGTCAATT TGTAGTCTCG TACTACAATC AGTTTATAAC TATTTGGAAC CAATTGTATG 1441 GTTCGATTGA TCCAACTTAT GGGTGTATAT GTCCTGCAGC AGCGAAAATG CGTCTTCGAT 1501 TTGAGGAGGA GAAAACAAAT GCGTTTCTTC TCGGACTCGA TGATACACAA TTCGGATCCA 1561 CTCGTTCCCA GATTTTCGGC ACCCGCCCAC TTCCCGTTCT TAATGAAGCT TACTATCTTG 1621 TCTCTCAAGA GGAGAGACAC AAGTCGATTG TGCGCAACCG TGATGAACAG ACCGATGGAC 1681 TAGCATTCGC CGTAGAAACT CAACCCACAC CACCTCCGAA ATACAAATGC ACTCATTGCG 1741 GGAAAAATGG TCATTCCACT GAAAGGTGTT TTCTTTTGAT TGGTTTTCCC AATGGAGGAA 1801 GAAGGGGTCG TGGGGGAGGA CGAGGGGGTC GAGGAGGGCG TGGTCTACAG TCTGGCCGCG 1861 AACAACCTTC AGGTCGCAGC GGTGGCATGG CTGCACACGC AGACAGCCCA AACTCACCAG 1921 CAGTCACGAC ATGCAGCAGC CAAGGCGGCA ACTTTCCAGG ACTGTCGACT GAGCAAATGA 1981 CTCGACTGCT GCACATGCTC GATACTCCGA CACAATCAGG AAATAACACG Predicted gene structure (within gDNA segment 36951 to 21949): Exon 1 28178 28167 ( 12 n); cDNA 609 620 ( 12 n); score: 0.750 Intron 1 28166 27802 ( 365 n); Pd: 0.000 (s: 0), Pa: 0.894 (s: 0.66) Exon 2 27801 26419 (1383 n); cDNA 621 2030 (1410 n); score: 0.754 MATCH C08HBa0294K15.1- SGN-U315924+ 0.754 1395 0.687 C PGS_C08HBa0294K15.1-_SGN-U315924+ (28178 28167,27801 26419) Alignment (genomic DNA sequence = upper lines): AGGAAACAAA CAGCAGGCGG GTGGACTAAA GTCACATAAG ACAACTGCAC TTATTATGTT 28119 || ||||||| AGTAAACAAA GT........ .......... .......... .......... .......... 620 CCTGTTGTCT TTTTCTTTTG TATTATATTT ATATTTAAAT AAAATAAAAT ACAAAAATGA 28059 .......... .......... .......... .......... .......... .......... 620 CTAAAGCCAA ACCTAAAATG AAATGGCCAA AGTCAAAAAC TTGCTGAAAT TACTTGTAAT 27999 .......... .......... .......... .......... .......... .......... 620 TTTTCTTTTA TTAAAATAAT AATAATTGTT TCTTCTTTTA TATTGTATTA TATAATTTCC 27939 .......... .......... .......... .......... .......... .......... 620 GTAATTGTTT CTCTTTTTAG CGTGATTCTC CATTCACCTT TTACAAAAAT ACTGCATAAT 27879 .......... .......... .......... .......... .......... .......... 620 ATTCATTGGA CTTGGAACCA TCTACTTTAA TTTTTGTTCC TTTTCTTTTC TAATTTTTGT 27819 .......... .......... .......... .......... .......... .......... 620 AAATATTAAT ATAACAGTAT TGTTGACTGA GATTAGGTTT AGACTT-TGT TTACTGGGCT 27760 | | | | | || ||||||| || || || |||||||||| .......... .......TTA TATAATGTTA GAATAGGTTT AGGTTTACGT TTACTGGGCT 663 TCGGCCCACT GTGATTATAT AACTATATAT ATCTCGTTGT GCTAATGGAA AACC--CAAG 27702 | ||||| | || ||||| | || ||||||| || ||||| | |||||||||| |||| |||| TAAGCCCATT GTAATTATGT AATTATATAT AT-TCGTTAT GCTAATGGAA AACCCCCAAG 722 CAGTTGAATT TATCTCTTTC AC-TA-AATT CTACATGGTA TCAGAGCCTC GACCGGGAAT 27644 |||||| | | | | || | | || |||| |||||||||| ||||||||| |||||||||| CAGTTGCAAT TCT-ACTGCC ATATACAATT CTACATGGTA TCAGAGCCTG GACCGGGAAT 781 CTAACCCTAG CCGAGAGCCG ACCATTTCCG CTACCGACGT ACGATCTCCT -GATCGTCGC 27585 | || ||||| ||||||| || ||||| || | |||| || | | |||| |||| CAAATCCTAG CCGAGAGTCG ACCATCGTCG TTGTCGACCA TCGTCGTTGT CGATCATCGC 841 CGCCGTCTTG CA--CGCCGA --AGC----C T-CCG-A-AC GGCCGATCGC CA-CAGCC-C 27538 || ||| || | ||| | | | | | | | | | || | | || | ||| CGTTGTCGAC CATTTGTCGA CCATCGTTTC TGCAGTATAT CGTCGCTGCC CATCTGCCTG 901 CCA--CG-AG ACGTCATGA- CTGCCGAGTC CACTCAATCC A--G-CACTG TTTCCATCAC 27485 || || | | ||| ||| |||| || | || | | ||| | ||| | GTTTCCGCAG ATCTTCTGAT CTGTACAGTC CAACTACTCG ATCGCCACAG CTTCATAGAA 961 TGTTTCCACG GT-GATT--G CTGCGACTGT CCGACCGATC CATGATCCGA GCTCCGTCTA 27428 | || || |||| |||||| | |||||||| |||||||| | |||||||||| AATCATGACT GTCGATTCCA CTGCGAAAAT TCGACCGATT CATGATCCAA GCTCCGTCTA 1021 TTATCTACAC CCGTCAGAAG GTCCGAGTAA TTCTCTCACT AAATACCTAC TGAAGGGAGA 27368 ||| | ||| ||||| |||| | || ||||| |||||| ||| |||||||||| |||||||||| CTATTTGCAC CCGTCTGAAG GACCAAGTAA TTCTCTTACT AAATACCTAC TGAAGGGAGA 1081 TAATTTTGAC GTTTGGGAGC AAGCGATTTG TAATGCGCTT GAAGGTAGAA GCAAGATTGG 27308 |||||||||| |||||||||| ||| |||| ||| || || ||||| |||| |||||||||| TAATTTTGAC GTTTGGGAGC GAGCTGTTTG TAACGCACTC GAAGGCAGAA GCAAGATTGG 1141 TTTTCTATAT GAAAAGGGTT TTCCAAAGCC GACGAACGTT TTGGAACTTG ATGCCTGGAA 27248 |||| ||||| |||||||| | |||||||||| ||||||| |||||||||| |||||||||| TTTTTTATAT GAAAAGGGAT TTCCAAAGCC CACGAACGAG TTGGAACTTG ATGCCTGGAA 1201 AGCGAACAAT TCCATCATTT GTTCGTGGAT TTTTAACAGC GCCGACGAGA CGATCCAGCC 27188 ||| ||||| || || || | |||| ||||| ||||||||| |||||||||| | || ||||| AGCAAACAAC TCAATTATAT GTTCATGGAT TTTTAACAGT GCCGACGAGA CAATTCAGCC 1261 GAGTCTCGTC GCTCAAAAAA TTGCCCACGA ATTGTGGACC GATATGAAGG CACGATATGG 27128 ||| ||||| |||| |||| |||||||||| ||| ||||| ||||| | || || | || || AAGTATCGTC TCTCACAAAA TTGCCCACGA ATTATGGACT GATATAACGG CAAGGTACGG 1321 AGGCACGAAT GCTCCTAAAT CGTGGCAGTT AAAGTCTGAC CTACAAATGT TGAGGCAAAA 27068 |||||||||| ||||| |||| ||||||| || |||||| || |||||||||| | || ||||| AGGCACGAAT GCTCCAAAAT CGTGGCAATT AAAGTCCGAT CTACAAATGT TAAGACAAAA 1381 AGGTCAGTCT GTAGTCTCGT ACTACAATCA GTTCATCATT GTCTGGAACC AATTGTATGG 27008 |||||| | | |||||||||| |||||||||| ||| || | | | ||||||| |||||||||| AGGTCAATTT GTAGTCTCGT ACTACAATCA GTTTATAACT ATTTGGAACC AATTGTATGG 1441 TTCGATTGAT CCAACTTGCG GGTGTATATG TCCTGCGGCT GCAAAAATGC GTCTTCGATT 26948 |||||||||| ||||||| | |||||||||| |||||| || || ||||||| |||||||||| TTCGATTGAT CCAACTTATG GGTGTATATG TCCTGCAGCA GCGAAAATGC GTCTTCGATT 1501 TGAGGAGGAG AAGACGCAGG CGTTTCTCCT CGGGCTTGAT GATGCTCAGT TCGGGGCGAC 26888 |||||||||| || || | | ||||||| || ||| || ||| ||| | || | |||| | || TGAGGAGGAG AAAACAAATG CGTTTCTTCT CGGACTCGAT GATACACAAT TCGGATCCAC 1561 TCGCTCTCAG ATCTTCGGCA CCCGCCCACT TCCTGTTCTC AACGAAGCCT ACTATCTTGT 26828 ||| || ||| || ||||||| |||||||||| ||| ||||| || ||||| | |||||||||| TCGTTCCCAG ATTTTCGGCA CCCGCCCACT TCCCGTTCTT AATGAAGCTT ACTATCTTGT 1621 CTCTTAGGAG GAGAGATACA AGTCGATTGT GCGTAACTGT GATGACCGAA CCGATGGGTT 26768 |||| | ||| |||||| ||| |||||||||| ||| ||| || ||||| | | ||||||| | CTCTCAAGAG GAGAGACACA AGTCGATTGT GCGCAACCGT GATGAACAGA CCGATGGACT 1681 GACATTCGCG GTTGAAACTC AACCCACACC ACCCCCGAAA TACAAGTGCA CCCATTGCGG 26708 ||||||| || ||||||| |||||||||| ||| |||||| ||||| |||| | |||||||| AGCATTCGCC GTAGAAACTC AACCCACACC ACCTCCGAAA TACAAATGCA CTCATTGCGG 1741 GAAAACTGGT CACTCTGCCG AACGGTGTTT TCTTTTGGTC GGTTTTCCCA ATGGAGGAAG 26648 ||||| |||| || || | | || ||||||| ||||||| | |||||||||| |||||||||| GAAAAATGGT CATTCCACTG AAAGGTGTTT TCTTTTGATT GGTTTTCCCA ATGGAGGAAG 1801 AGGGGGTTGT GTGGGCGGAC GCGGGGGTCG AGGAGGTCGT GG-C-CCA-C CTGGCCGTGA 26591 | ||||| || | ||| |||| | |||||||| |||||| ||| || | || ||||||| || AAGGGGTCGT GGGGGAGGAC GAGGGGGTCG AGGAGGGCGT GGTCTACAGT CTGGCCGCGA 1861 GCAGTCCACA AGTCGCGATA GCGGCACGGC TGCACACACC GACGGTCCAA CGCCCGTACC 26531 || | || ||||| | |||| ||| ||||||| | ||| | |||| | | ||| ACAACCTTCA GGTCGCAGCG GTGGCATGGC TGCACACGCA GACAGCCCAA -ACTC--ACC 1918 AGCATCGACG TCCGGCAGCA GCCAAAGCGG GGTCCTTTTC GGGCTGTCGG CCGAGCAGAT 26471 |||| ||| | |||||| ||||| |||| | || || |||||| | ||||| || AGCAGTCACG ACATGCAGCA GCCAAGGCGG CAACTTTCCA GGACTGTCGA CTGAGCAAAT 1978 GACCCGACTA TTGATTATGC TCGACACTCC TGCACAATCA GGCAATAACA CG 26419 ||| ||||| || |||| |||| ||||| |||||||| || ||||||| || GACTCGACTG CTGCACATGC TCGATACTCC GACACAATCA GGAAATAACA CG 2030 hqPGS_C08HBa0294K15.1-_SGN-U315924+ (27801 26419) ******************************************************************************** EST sequence 70 +strand 890 n (File: SGN-U335137+) 1 AGAGCTGGAG CTCCCCGCGG TGGCGGCCGC TCTAGAACTA GTGGATCCCC CGGGCTGCAG 61 GGAAAAACAT ATATCTTATT GCTATACACT TATAATTATG CAATATACAT ACATTTTAAT 121 TCGGTTCAAT TATATGCAAA GCAAATTTTA TAATAATATT GCAGCGAAAT AGGCAGCGAA 181 TTATACAATT GTAGTTAAAT AGGATAGCGA ATTATACAAT TGCAGCGAAA TAGGCCAGCG 241 AATTATACAA TTTAGGTCAG CGAATTATAC AATTTTATGT TTGCTATGGA GCGCAATTAT 301 GCAAACTTTG TTATAGCATA CAAATATGAA TTTTTTGTTT GTTATATGTG AAAGTTGCCC 361 ATTAATTAAA GAGTCAATAA AATAGCGGTC TAATCAAGTC CTAAGCAGCC CAAGGTTTGA 421 CCCGTCAACC CAAAAATGAA TAATATTATG GGAAAAGGGT ATGATATACC CCTCAACTTT 481 GTCATTTGAA ACTGATATAC CCCTCGTTAT GAAAGTGGCT CATATATACC CTTACCGTTA 541 TACAAATGGT TCACATATAC CTCTGCCGTT ACAAAATGAG CTCATATATA CCCTTCATTT 601 AACGAAAGTG AAAAAATTAC TTTTAAATTT ATAATTTTAC TTTAATTTTA AAAAAAAATA 661 TATTTAGGGG CATATATGAT TCTTTTTTCA AAGTTCAAGG TATATTTCAA ATTTTTTTAA 721 TACATAAATT ATTTTTTTGA CTTATTTATT ATAATTATTT GAGTTNATTA ATCTTGTTTT 781 TTTTCTTNCA TTCCCNTAGT GTAAGAAAAA AATTTAAAAC ATTTTTTATG TCTATATGGA 841 ATTTAATTTT TGGTATCGAA GAAAAGAATG GTCATNCTAC ATAGTTTTAC Predicted gene structure (within gDNA segment 30446 to 22397): Exon 1 29221 29162 ( 60 n); cDNA 145 201 ( 57 n); score: 0.767 Intron 1 29161 29010 ( 152 n); Pd: 0.000 (s: 0.78), Pa: 0.000 (s: 0.92) Exon 2 29009 28934 ( 76 n); cDNA 202 277 ( 76 n); score: 0.895 Intron 2 28933 28885 ( 49 n); Pd: 0.782 (s: 0.92), Pa: 0.000 (s: 0.92) Exon 3 28884 28805 ( 80 n); cDNA 278 357 ( 80 n); score: 0.925 Intron 3 28804 28346 ( 459 n); Pd: 0.000 (s: 0.90), Pa: 0.214 (s: 0) Exon 4 28345 28320 ( 26 n); cDNA 358 383 ( 26 n); score: 0.654 Intron 4 28319 26122 (2198 n); Pd: 0.000 (s: 0), Pa: 1.000 (s: 0) Exon 5 26121 26116 ( 6 n); cDNA 384 389 ( 6 n); score: 0.500 Intron 5 26115 23467 (2649 n); Pd: 0.000 (s: 0), Pa: 0.889 (s: 0) Exon 6 23466 23457 ( 10 n); cDNA 390 399 ( 10 n); score: 1.000 MATCH C08HBa0294K15.1- SGN-U335137+ 0.870 258 0.290 C PGS_C08HBa0294K15.1-_SGN-U335137+ (29221 29162,29009 28934,28884 28805,28345 28320,26121 26116,23466 23457) Alignment (genomic DNA sequence = upper lines): ATTTTACTTC AAATATTGCA GAGAAAAAGG CCAAAAAATT ATACAATTGT GAATTATACA 29162 |||||| | ||||||||| | |||| ||| || |||| |||||||||| | ||| | | ATTTTA-TAA TAATATTGCA GCGAAATAGG -CAGCGAATT ATACAATTGT -AGTTAAATA 201 ATTGCAGTGA AATACAATTT TTTCTAGTTT TATACAACAG AAGTGTATAT ATTGTGTTTC 29102 .......... .......... .......... .......... .......... .......... 201 TGTTTTTGTA TAAAGCGACA AAAACATATA TCTTCTTGCT ATACACTTAT AATTATGCAA 29042 .......... .......... .......... .......... .......... .......... 201 TATACATACA TTTTAATTCG ATTCAACTGT ATGCAAAGCT AATTATACAA TTGCGGCGAA 28982 | | ||| |||||||||| |||| ||||| .......... .......... .......... ..GGATAGCG AATTATACAA TTGCAGCGAA 229 ATAGGCCAGC GAATTATACA ATTTAAGCCA GCGAATTATA CAATTTAGGC CAGCGAATTA 28922 |||||||||| |||||||||| ||||| | || |||||||||| |||||| ATAGGCCAGC GAATTATACA ATTTAGGTCA GCGAATTATA CAATTTTA.. .......... 277 TACACTTTTA TATGTATAGC GAATTATACA GTTTTTATGT TTGCTATGGA GCGCAATTAT 28862 ||| |||||||||| |||||||||| .......... .......... .......... .......TGT TTGCTATGGA GCGCAATTAT 300 GCAAAGTTTG CTATATTATA CAAATATGAT TTTTTTGTTT GCTATATGTG AAAGTTGCCT 28802 ||||| |||| |||| ||| ||||||||| |||||||||| | |||||||| ||||||| GCAAACTTTG TTATAGCATA CAAATATGAA TTTTTTGTTT GTTATATGTG AAAGTTG... 357 AAAAAAACGA GGAAAAAAAT TGGAAAAAAA AACGAGGAAA ATATTTGAAA AAAGAGGCTT 28742 .......... .......... .......... .......... .......... .......... 357 AAAAGCTATT GCTAGCGAGA TTTGAACTCA CAAACAACTT AAATGCTTGA CTTTTTCAAG 28682 .......... .......... .......... .......... .......... .......... 357 GCTCCTTAAA TCACTAGGCT ACAACACCTT GTTATGTTAA AGGTGTCCAA ATTATATTAT 28622 .......... .......... .......... .......... .......... .......... 357 TTAACACTTT GTATATTATT TTACTTGCAT ATACGGTGTA ATTTGTTGAC GAAGGGTGTC 28562 .......... .......... .......... .......... .......... .......... 357 CAACAGTATA TAGCTATGCC CCTAGTCTTG CTTAGAGTGA TTGGTGTATT GTTATTGCAT 28502 .......... .......... .......... .......... .......... .......... 357 TAGTTATATT ACCATAATTC TTATATTTGA GATTCATTAT TATTTATCAT TGTTTTCAAT 28442 .......... .......... .......... .......... .......... .......... 357 AATTTATCCT AATATATGTT GTTTATTATG TACCGTTAAT TATATTATTT TCTTGTTCTT 28382 .......... .......... .......... .......... .......... .......... 357 TTGGTAGACT TTGCATTATT TTCTTTTTTA TTTTAGAAAA TTAATTTTAC ATTTACTAAA 28322 | |||||| | | | | |||| .......... .......... .......... ......CCCA TTAATTAAAG AGTCAATAAA 381 ATTGAGCCAA AAATCTTTTG AAAGAAACTC TCTATCTTCG GTAAGTAATA ATATAATAAT 28262 || AT........ .......... .......... .......... .......... .......... 383 ATAATTTGAA TATATTTACT CTTCTTTGAG CTTTACTTAT AAAATTAACG GAATATGTTA 28202 .......... .......... .......... .......... .......... .......... 383 TTATTATTAT CATTACGAAC AGGAGGAAAC AAACAGCAGG CGGGTGGACT AAAGTCACAT 28142 .......... .......... .......... .......... .......... .......... 383 AAGACAACTG CACTTATTAT GTTCCTGTTG TCTTTTTCTT TTGTATTATA TTTATATTTA 28082 .......... .......... .......... .......... .......... .......... 383 AATAAAATAA AATACAAAAA TGACTAAAGC CAAACCTAAA ATGAAATGGC CAAAGTCAAA 28022 .......... .......... .......... .......... .......... .......... 383 AACTTGCTGA AATTACTTGT AATTTTTCTT TTATTAAAAT AATAATAATT GTTTCTTCTT 27962 .......... .......... .......... .......... .......... .......... 383 TTATATTGTA TTATATAATT TCCGTAATTG TTTCTCTTTT TAGCGTGATT CTCCATTCAC 27902 .......... .......... .......... .......... .......... .......... 383 CTTTTACAAA AATACTGCAT AATATTCATT GGACTTGGAA CCATCTACTT TAATTTTTGT 27842 .......... .......... .......... .......... .......... .......... 383 TCCTTTTCTT TTCTAATTTT TGTAAATATT AATATAACAG TATTGTTGAC TGAGATTAGG 27782 .......... .......... .......... .......... .......... .......... 383 TTTAGACTTT GTTTACTGGG CTTCGGCCCA CTGTGATTAT ATAACTATAT ATATCTCGTT 27722 .......... .......... .......... .......... .......... .......... 383 GTGCTAATGG AAAACCCAAG CAGTTGAATT TATCTCTTTC ACTAAATTCT ACATGGTATC 27662 .......... .......... .......... .......... .......... .......... 383 AGAGCCTCGA CCGGGAATCT AACCCTAGCC GAGAGCCGAC CATTTCCGCT ACCGACGTAC 27602 .......... .......... .......... .......... .......... .......... 383 GATCTCCTGA TCGTCGCCGC CGTCTTGCAC GCCGAAGCCT CCGAACGGCC GATCGCCACA 27542 .......... .......... .......... .......... .......... .......... 383 GCCCCCACGA GACGTCATGA CTGCCGAGTC CACTCAATCC AGCACTGTTT CCATCACTGT 27482 .......... .......... .......... .......... .......... .......... 383 TTCCACGGTG ATTGCTGCGA CTGTCCGACC GATCCATGAT CCGAGCTCCG TCTATTATCT 27422 .......... .......... .......... .......... .......... .......... 383 ACACCCGTCA GAAGGTCCGA GTAATTCTCT CACTAAATAC CTACTGAAGG GAGATAATTT 27362 .......... .......... .......... .......... .......... .......... 383 TGACGTTTGG GAGCAAGCGA TTTGTAATGC GCTTGAAGGT AGAAGCAAGA TTGGTTTTCT 27302 .......... .......... .......... .......... .......... .......... 383 ATATGAAAAG GGTTTTCCAA AGCCGACGAA CGTTTTGGAA CTTGATGCCT GGAAAGCGAA 27242 .......... .......... .......... .......... .......... .......... 383 CAATTCCATC ATTTGTTCGT GGATTTTTAA CAGCGCCGAC GAGACGATCC AGCCGAGTCT 27182 .......... .......... .......... .......... .......... .......... 383 CGTCGCTCAA AAAATTGCCC ACGAATTGTG GACCGATATG AAGGCACGAT ATGGAGGCAC 27122 .......... .......... .......... .......... .......... .......... 383 GAATGCTCCT AAATCGTGGC AGTTAAAGTC TGACCTACAA ATGTTGAGGC AAAAAGGTCA 27062 .......... .......... .......... .......... .......... .......... 383 GTCTGTAGTC TCGTACTACA ATCAGTTCAT CATTGTCTGG AACCAATTGT ATGGTTCGAT 27002 .......... .......... .......... .......... .......... .......... 383 TGATCCAACT TGCGGGTGTA TATGTCCTGC GGCTGCAAAA ATGCGTCTTC GATTTGAGGA 26942 .......... .......... .......... .......... .......... .......... 383 GGAGAAGACG CAGGCGTTTC TCCTCGGGCT TGATGATGCT CAGTTCGGGG CGACTCGCTC 26882 .......... .......... .......... .......... .......... .......... 383 TCAGATCTTC GGCACCCGCC CACTTCCTGT TCTCAACGAA GCCTACTATC TTGTCTCTTA 26822 .......... .......... .......... .......... .......... .......... 383 GGAGGAGAGA TACAAGTCGA TTGTGCGTAA CTGTGATGAC CGAACCGATG GGTTGACATT 26762 .......... .......... .......... .......... .......... .......... 383 CGCGGTTGAA ACTCAACCCA CACCACCCCC GAAATACAAG TGCACCCATT GCGGGAAAAC 26702 .......... .......... .......... .......... .......... .......... 383 TGGTCACTCT GCCGAACGGT GTTTTCTTTT GGTCGGTTTT CCCAATGGAG GAAGAGGGGG 26642 .......... .......... .......... .......... .......... .......... 383 TTGTGTGGGC GGACGCGGGG GTCGAGGAGG TCGTGGCCCA CCTGGCCGTG AGCAGTCCAC 26582 .......... .......... .......... .......... .......... .......... 383 AAGTCGCGAT AGCGGCACGG CTGCACACAC CGACGGTCCA ACGCCCGTAC CAGCATCGAC 26522 .......... .......... .......... .......... .......... .......... 383 GTCCGGCAGC AGCCAAAGCG GGGTCCTTTT CGGGCTGTCG GCCGAGCAGA TGACCCGACT 26462 .......... .......... .......... .......... .......... .......... 383 ATTGATTATG CTCGACACTC CTGCACAATC AGGCAATAAC ACGGGTAAGG TTCATGCTTT 26402 .......... .......... .......... .......... .......... .......... 383 GTCACCCGAT TGGTTAATTG ATAGTGGTGC TTCACACCAC ATGACGGGTA ATTTTCCATC 26342 .......... .......... .......... .......... .......... .......... 383 TCTTTATGAT ATTATGTCTG TCCCTGAGTG TTCTATTGGC CTCCCGGATG GCACTCGTGT 26282 .......... .......... .......... .......... .......... .......... 383 TATGGCCAAT TACTGTGGTA GTGTACAGAT TTCTGCCAAT TTATTTTTGA GAAATGTGCT 26222 .......... .......... .......... .......... .......... .......... 383 GTTCGTCCCT ACCTTGAAAT GCAACTTGAT CTCTATTGGA TGCCTGATTG AGTTTAACAA 26162 .......... .......... .......... .......... .......... .......... 383 TTATCGTGTG ATTTTTGATG ATTGTTGTTG TGTGTTACAG GACCGTGTTT TGACAATGGA 26102 | || .......... .......... .......... .......... AGCGGT.... .......... 389 GATTGGTCGA GGTACGGCTT TTAACGGAGT GTACGTGTTC CAGTCTCAAG CTTTCGTGTT 26042 .......... .......... .......... .......... .......... .......... 389 AGCCTCTAGA GTCGACCAGG TCGAGTTGTT GCATAAGCAG CTTGGTCATC TGTCTCCTGC 25982 .......... .......... .......... .......... .......... .......... 389 AATTTTATGT TCCCCTCCTT TTAATAAATC CCCCTCAGAT ATTAAACAAT TAGAGTCATG 25922 .......... .......... .......... .......... .......... .......... 389 TGAGATTTGT TTTTATTCTA AGCAAACTCG CTCAAGTTTT TCTTCTAGTT CTAATAAAGC 25862 .......... .......... .......... .......... .......... .......... 389 TGTTGATTTA ATTCATTGTG ATTTGTGGGG TCCTTACTCC ACCTGTGTGT CTTCTGGGTC 25802 .......... .......... .......... .......... .......... .......... 389 ATATTATTTT TTGACCATTG TGGATGATCA CTCTCGAGCT GTATGGGTGT ACCTCATAAG 25742 .......... .......... .......... .......... .......... .......... 389 TGATAAAAGT GAGGTCACAT CTTGTTTAAA ACAGTTTTTT ATGTTGATCC AAACTCAGTA 25682 .......... .......... .......... .......... .......... .......... 389 CCATGAAACA ATAAAAATTA TTCGATCTGA CAATGGCACT GAATTTCTTA ATACCCCCCT 25622 .......... .......... .......... .......... .......... .......... 389 TCGTCAGTTT TACCACGACG TGGGCGTCCT CGTCCAAACA TCATGTGTCG GAACGCCCCA 25562 .......... .......... .......... .......... .......... .......... 389 ACAAAATGGG CGGGTCGAGC GCAAGCGCCG TCACATCTTA AACGTGGCGC GCTCTTTAAT 25502 .......... .......... .......... .......... .......... .......... 389 GTTTCAGGCG TCCCTCCCTG TTGAGTTTTG GGGGGAGTAT GTACGTACTG CAGTTTATCT 25442 .......... .......... .......... .......... .......... .......... 389 CATCAATCGC ACACCTAGGC GCCTTATCGG TGGCAAGTCT CCGTTCGAAA TACTAAATAA 25382 .......... .......... .......... .......... .......... .......... 389 AGCCCCACAA GATATTTCCC AGCTACGTGT CTTCGGGTGT CTGTGTTTTG TCCGAAACAT 25322 .......... .......... .......... .......... .......... .......... 389 CCAGCGTCCA CCATATAAAT TTGCACCCCG TAGTCTCAAA TGTATGTTCC TCGGTTATCC 25262 .......... .......... .......... .......... .......... .......... 389 TTCTGGGAAA AAAGGTTGGC GGGTGTACGA TTTGGAGAAT CATCGTTTCT TTCATACACG 25202 .......... .......... .......... .......... .......... .......... 389 TGACATTGCA TTTGACGAGA CGATTTTTCC TTTCGCAACT ACTCCTACCA CCTTGCCAGC 25142 .......... .......... .......... .......... .......... .......... 389 CACGACGTAC ACACCGCCGG TCCAACACGC CGACTTTCCC ATCGTTGTCT CCACTACCCA 25082 .......... .......... .......... .......... .......... .......... 389 GCCGAACACC ATTGCGGTGC AGCAACCCGA ACCCACCTCC GCCACAGAGT CCACGGCCAC 25022 .......... .......... .......... .......... .......... .......... 389 CGTCCCTCCC GTCGACCCGG GCGTGGTTTA GCCACTTGCC CGGGCTTCGG GTCGTGTTCG 24962 .......... .......... .......... .......... .......... .......... 389 TCATCCGCCT GGATACCTTT CTGAATATGT GTTCCAGTCT GCTACGTCTG TACCTCCCTT 24902 .......... .......... .......... .......... .......... .......... 389 TACTAGTCCT TCGACTGCTC TTCGTTTAGG TACACGGTTC CCTATCACTA ACTACGTTCA 24842 .......... .......... .......... .......... .......... .......... 389 TTATGAAAAA ATTGCATGAC AGGTATCGTG GTTTGTTGGC TGCCATCTCT GCTACAGACG 24782 .......... .......... .......... .......... .......... .......... 389 TCCCCCGGTC CTTTCGGGAT GTTGTTAAAT TTGCCAATTG GAGGGAGGCT ATGCAATCAG 24722 .......... .......... .......... .......... .......... .......... 389 AAATTCGGGC TTTGGAAAAT AATCAGACTT GGGTGTTGAC TGATCTTCCC ATCGATAGGC 24662 .......... .......... .......... .......... .......... .......... 389 GCGCTTTGGG GTGTCAATGG GTGTACAAGA CTGAATTTCA CGCTGATGGG TCTAAAGAAC 24602 .......... .......... .......... .......... .......... .......... 389 GAGACAAGGC ACGATTGGTT ATTTTGGGAA ATCATCAGGA ATTCGGAACA GGTTATACGG 24542 .......... .......... .......... .......... .......... .......... 389 ATACTTTCGC TCCAGTTGCC CGAATGGGAA CTGTACGAAT CTTATTATCC GTTGCCGTAG 24482 .......... .......... .......... .......... .......... .......... 389 CCAAGAATTG GGAAATTCAC CAACTTGATG TGAATAACGC CTTTTTACAC GGGGACCTTA 24422 .......... .......... .......... .......... .......... .......... 389 CTGAGGAGGT CTACATGCGG CTTCCACCCG GTTATTCTAA TGCAAGCCCC GGCAAAGTTT 24362 .......... .......... .......... .......... .......... .......... 389 GTCGACTGAG AAAATCTCTC TATGGTCTAC GACAATCACC CAGGAACTGG TTCGAGAAAC 24302 .......... .......... .......... .......... .......... .......... 389 TGACAATTGC ATTGAGGTGT TATGGTTTCA AACAGGCTCA TAAGGATCAT ACGCTCTTCA 24242 .......... .......... .......... .......... .......... .......... 389 TTTTTCGACG TGGCACCGAC TTCCTGGCTA TCTTAATTTA TGTCGACGAC ATCTTAGTCA 24182 .......... .......... .......... .......... .......... .......... 389 CAGGTAACAA CCCCAGTTTA TGTGCTTCCT TCATAAAAAA TATTTACACA ATTGTTTTCA 24122 .......... .......... .......... .......... .......... .......... 389 GCTGAAGGAT TTGGGGCCTT CAAAATATTT TCTGGGAATC GAATGTGCCC GCTCTTCAAC 24062 .......... .......... .......... .......... .......... .......... 389 TGGTTTAGTG TTGTGCCAAC GCAAATATGC ACTGGAAATT TTACAGAAAG CCGGACTCAC 24002 .......... .......... .......... .......... .......... .......... 389 CGACTGTAAG CCGGCCGCGA CCCTTCTGTC CCTTGGTCAC AGCTTGGCCA CGTAGACCAA 23942 .......... .......... .......... .......... .......... .......... 389 TGCGCCAATT CACGATCCCG GCAAATATCG TCGATTGGTT GGCCGTCTCA TTTATCTGAC 23882 .......... .......... .......... .......... .......... .......... 389 GATAATGCAC CCGGACTTGG CCTATTATGT TCATCTCTTG TCCCAGTTTA TGCACGAGCC 23822 .......... .......... .......... .......... .......... .......... 389 CAGAGTTGAC CATCTCAACG CTGCTCTGCA CGTGCTCCGT TACCTCAAGG GTTATCCGGG 23762 .......... .......... .......... .......... .......... .......... 389 TCAGGGCATT CTTCTCCGGG CTGATAGTAA TTTGCAGATT TTGGCCTATT GTGATTCTGA 23702 .......... .......... .......... .......... .......... .......... 389 TTGGGCTACT TGTCCTGTCA GCGGCTATTT TGTTTTGTTG GGGGCTCTCC CATTTCTTGG 23642 .......... .......... .......... .......... .......... .......... 389 AAGACCAAGA AACAGACTAC AGTCTCTCGT TCTTCCGCAG AAGCTGAGTA CCGTGCCATG 23582 .......... .......... .......... .......... .......... .......... 389 GCTGACACTT GTTACAAAAT TCGGTGGATT CAGCATATCC TCGGATGTCT CGGAGTCGCG 23522 .......... .......... .......... .......... .......... .......... 389 GCTACTTCAC TTCCGAGGTT ATATTGTGAT AACCAATCTG CTCTTTATAT CGCAGCTAAT 23462 ||||| .......... .......... .......... .......... .......... .....CTAAT 394 CAAGT 23457 ||||| CAAGT 399 hqPGS_C08HBa0294K15.1-_SGN-U335137+ (29221 29162,29009 28934,28884 28805) ******************************************************************************** EST sequence 42 -strand 2089 n (File: SGN-U315404-) 1 TTTTTTTTTT TTTTTTTTTC CTATCAAATG TGATACTGGG GGAATATATA TATATATATA 61 TAATGTTAAT TAATCGAAAT TGAGAAGCTG AAATTTCACC TATAACATCA AGTATACACG 121 TTACCTATGC CCTGGTTGTT TATAGCTGAA TTTCAAGCCC CTTTTCTTAT TCTATTATTA 181 CACCCCTAAT GAAATGATTA AGGAACTTAT TAAAGCAAAA CAACTAAATT CTTATTTTGC 241 AATCTTTTCT TGTCATTCAC AAGCGATAAT TCTAAATCTT TTTCCTTCTC TCCATTTTAT 301 ACAAGCTCTT GGGAAAATTG TATATAATAG CAAACTAGTA ATCTAACTAA ATGGAGTAGC 361 TAGAGTTTGA TTTAATTGTG CTCCATAGCA AACGTTAGCT AAAGTTTGTC AGGCGTCTCC 421 CTCCCAAAAA TCTCGCTCGC CACTCTCCAT TCTCGCTCGC CTATCTCGCT ATATACACAG 481 AAGTGTATAA ATTCTGTTTC TATTTTGTAT AAAGCGAGAG AAAATTGTAT ATACACATGT 541 AAAAATATAT ATCTTCGTGT TATACACTTA ATTATACAAA TTACAAACAT TTTACTTCAA 601 ATATTGCAGA GAAAAAGGCC AACGAATTAT ACAATTGTGA ATTATATAAT TGCAGTGAAA 661 TACAATTTTC TCTAACTTTA TACAACAGAA GTGTATATAT TGTGTTTTTG TTTTTGTATA 721 AAGCGAGACA AAAACATATA TATTCTTGCC ATACACTTAT AATTATGCAA TATACATACA 781 TTTTAATTCG ATTCAACGGT ATGCAAAGCA AATTTATAAA AATATTGCAG CGAAATAAGC 841 AGCGATTTAT ACGATTGTGC ATTACACAAT CGCAGTGAAT GAAGATAGCG AATTATACAA 901 TTGCAGCGAA ATAGGCCATC AAATTATACA ATTTAGGCCA GCGAATTATA CAATTGTATA 961 TGTATAGCGA ATTATACAGT TTTATGTTTG CTATGGAGCG CAATTATGCA AACTTTGTTA 1021 TAACATACAA ATATGAATTT TTTATTTGCT ATACGTGAAA GTTGCCCTTA ATTAAATGCT 1081 CCACAGTCTA TACGAATATT TCCATTCTTA CCCGTCTTCA CACCAACTCG GCCCAATTTA 1141 GTCATCGCAT TAACAAATGC GGTTTCAAAA ACTTTAAAAT TACTGGCCCA CAAATTAACA 1201 GTACCTTTAG ACCTTTGGTC TGTGAACAAA ACTTGATCTG ATGTGAATAG GCCCATTCCG 1261 TTTTGCAAGT TTTGGAAATA CACATTGTCA AAAGCCCTAG GTGTTATTGG GTCCATGTTG 1321 ATGGCTATTC TTGGGTCCAC ATTTTTCGGA CACATTTGTT CTAATTGGGC TGCATACGTC 1381 TTGTTGAGAC TTGGATCCAC TGGGTTTTTA GGGTTAAAGT TGAAAATTCG GTTCGAGAAT 1441 TGGTCGCAGT GAGAAAATCC AACAGTATGG GCCGCAGATA AGGCAATCAT ATCAGCCTGA 1501 TTTAAACCAT GAGAGGCAAA CATTGTATTG AGTTGATCCA AATTGAAAGT AGGTTTAGGC 1561 AACTTTCCCC CTACATTTGT AGATTTTGAT GTCAAACCAT CTAATCTCCC CAATTCCACT 1621 GCATACCCCG GTCCACCGGA TAGTTGAATA ACATCTCGAG TGGCTAAGGC AAGAATATCA 1681 GCACAAGAAA CTTTATTTTT ACAACTTGGG ATCGCATCAA CTGCGGCTTT TGCTTTGATA 1741 ACTGTGTCAA ATCCATCTCC AGCCAATGAA AGATTATCTG GGTGATCTTT TTCTGCTGTG 1801 TTCCCTGCCG TTGATGCTAT TATCACCGAT GCATCACAAC CCTCAACAAA GCAATCATGG 1861 AAGAAAAGAC GAAGAACAGC CGGAATTGTG ACAAACGTTT GTTTGAATTT CTGGTTAACA 1921 ACATTACGCA CAATGGATTC AACATTAGGA CAAGTTTGGG CATAAAAATT GGTTTTGAGT 1981 TGAGCATCTA CCAAGTTTGG CATGAAAATA CTAACACAAG AAATTGACAA AAATGATGTA 2041 ATAAAAACTT GTAAATAACC CATATTTTTT TCTATATATA ATCAAAAAT Predicted gene structure (within gDNA segment 34157 to 19155): Exon 1 29496 28956 ( 541 n); cDNA 312 859 ( 548 n); score: 0.864 Intron 1 28955 28180 ( 776 n); Pd: 0.000 (s: 0.59), Pa: 0.999 (s: 0.57) Exon 2 28179 28133 ( 47 n); cDNA 860 902 ( 43 n); score: 0.574 Intron 2 28132 26122 (2011 n); Pd: 0.998 (s: 0.57), Pa: 1.000 (s: 0) Exon 3 26121 26116 ( 6 n); cDNA 903 907 ( 5 n); score: 0.500 Intron 3 26115 24115 (2001 n); Pd: 0.000 (s: 0), Pa: 0.234 (s: 0) Exon 4 24114 24098 ( 17 n); cDNA 908 923 ( 16 n); score: 0.706 Intron 4 24097 23467 ( 631 n); Pd: 0.000 (s: 0), Pa: 0.889 (s: 0.58) Exon 5 23466 23410 ( 57 n); cDNA 924 977 ( 54 n); score: 0.614 Intron 5 23409 22855 ( 555 n); Pd: 0.000 (s: 0.62), Pa: 0.900 (s: 0) Exon 6 22854 22837 ( 18 n); cDNA 978 995 ( 18 n); score: 0.500 Intron 6 22836 22212 ( 625 n); Pd: 0.000 (s: 0), Pa: 0.988 (s: 0) Exon 7 22211 22196 ( 16 n); cDNA 996 1011 ( 16 n); score: 0.688 Intron 7 22195 22032 ( 164 n); Pd: 0.073 (s: 0), Pa: 0.000 (s: 0) Exon 8 22031 22010 ( 22 n); cDNA 1012 1033 ( 22 n); score: 0.636 Intron 8 22009 21070 ( 940 n); Pd: 0.799 (s: 0), Pa: 0.939 (s: 0) Exon 9 21069 21060 ( 10 n); cDNA 1034 1043 ( 10 n); score: 0.600 Intron 9 21059 20498 ( 562 n); Pd: 0.900 (s: 0), Pa: 0.000 (s: 0) Exon 10 20497 20488 ( 10 n); cDNA 1044 1053 ( 10 n); score: 0.800 PPA cDNA 19 1 MATCH C08HBa0294K15.1- SGN-U315404- 0.840 744 0.356 C PGS_C08HBa0294K15.1-_SGN-U315404- (29496 28956,28179 28133,26121 26116,24114 24098,23466 23410,22854 22837,22211 22196,22031 22010,21069 21060,20497 20488) Alignment (genomic DNA sequence = upper lines): GGAAAATTGT ATAAAATAGC AAATTAATAA CCTAAATTAA ATTGAATAGC TAGGGTTTGA 29437 |||||||||| ||| |||||| ||| || ||| |||| ||| || || |||| ||| |||||| GGAAAATTGT ATATAATAGC AAACTAGTAA TCTAA-CTAA ATGGAGTAGC TAGAGTTTGA 370 TTTAATTGTG CTCCATAGCA AACATTGACA AAAAATTGCC AGGCGTCTCT CTCCCAGAAG 29377 |||||||||| |||||||||| ||| || | ||| ||| | ||||||||| |||||| || TTTAATTGTG CTCCATAGCA AACGTTAGCT AAAGTTTGTC AGGCGTCTCC CTCCCAAAAA 430 TCTCGCTCGC CACTCTCCCA T-T--CTCGC CTCTCTCGCT TTATACACAA AAGTGTATAA 29320 |||||||||| |||||||| | | ||||| || ||||||| |||||||| |||||||||| TCTCGCTCGC CACTCTCCAT TCTCGCTCGC CTATCTCGCT ATATACACAG AAGTGTATAA 490 TTTCTGTTTC TGTTTTGTAT AAAGCGAGAG AAAATTGTAT TTACACATGC AAAAATGTAT 29260 ||||||||| | |||||||| |||||||||| |||||||||| |||||||| |||||| ||| ATTCTGTTTC TATTTTGTAT AAAGCGAGAG AAAATTGTAT ATACACATGT AAAAATATAT 550 ATCTTCGTGT TATACACTTA ATTATATAAT TTACAAACAT TTTACTTCAA ATATTGCAGA 29200 |||||||||| |||||||||| |||||| || |||||||||| |||||||||| |||||||||| ATCTTCGTGT TATACACTTA ATTATACAAA TTACAAACAT TTTACTTCAA ATATTGCAGA 610 GAAAAAGGCC AAAAAATTAT ACAATTGTGA ATTATACAAT TGCAGTGAAA TACAATTTTT 29140 |||||||||| || |||||| |||||||||| |||||| ||| |||||||||| ||||||||| GAAAAAGGCC AACGAATTAT ACAATTGTGA ATTATATAAT TGCAGTGAAA TACAATTTTC 670 TCTAGTTTTA TACAACAGAA GTGTATATAT TGTGTTTCTG TTTTTGTATA AAGC--GACA 29082 |||| |||| |||||||||| |||||||||| ||||||| || |||||||||| |||| |||| TCTAACTTTA TACAACAGAA GTGTATATAT TGTGTTTTTG TTTTTGTATA AAGCGAGACA 730 AAAACATATA TCTTCTTGCT ATACACTTAT AATTATGCAA TATACATACA TTTTAATTCG 29022 |||||||||| | ||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAACATATA TATTCTTGCC ATACACTTAT AATTATGCAA TATACATACA TTTTAATTCG 790 ATTCAACTGT ATGCAAAGCT AA-TTAT--A CA-ATTGCGG CGAAATAGGC CAGCGAATTA 28966 ||||||| || ||||||||| || |||| | | ||||| | ||||||| | |||||| ||| ATTCAACGGT ATGCAAAGCA AATTTATAAA AATATTGCAG CGAAATAAG- CAGCGATTTA 849 TACAATTTAA GCCAGCGAAT TATACAATTT AGGCCAGCGA ATTATACACT TTTATATGTA 28906 ||| ||| TACGATTGTG .......... .......... .......... .......... .......... 859 TAGCGAATTA TACAGTTTTT ATGTTTGCTA TGGAGCGCAA TTATGCAAAG TTTGCTATAT 28846 .......... .......... .......... .......... .......... .......... 859 TATACAAATA TGATTTTTTT GTTTGCTATA TGTGAAAGTT GCCTAAAAAA ACGAGGAAAA 28786 .......... .......... .......... .......... .......... .......... 859 AAATTGGAAA AAAAAACGAG GAAAATATTT GAAAAAAGAG GCTTAAAAGC TATTGCTAGC 28726 .......... .......... .......... .......... .......... .......... 859 GAGATTTGAA CTCACAAACA ACTTAAATGC TTGACTTTTT CAAGGCTCCT TAAATCACTA 28666 .......... .......... .......... .......... .......... .......... 859 GGCTACAACA CCTTGTTATG TTAAAGGTGT CCAAATTATA TTATTTAACA CTTTGTATAT 28606 .......... .......... .......... .......... .......... .......... 859 TATTTTACTT GCATATACGG TGTAATTTGT TGACGAAGGG TGTCCAACAG TATATAGCTA 28546 .......... .......... .......... .......... .......... .......... 859 TGCCCCTAGT CTTGCTTAGA GTGATTGGTG TATTGTTATT GCATTAGTTA TATTACCATA 28486 .......... .......... .......... .......... .......... .......... 859 ATTCTTATAT TTGAGATTCA TTATTATTTA TCATTGTTTT CAATAATTTA TCCTAATATA 28426 .......... .......... .......... .......... .......... .......... 859 TGTTGTTTAT TATGTACCGT TAATTATATT ATTTTCTTGT TCTTTTGGTA GACTTTGCAT 28366 .......... .......... .......... .......... .......... .......... 859 TATTTTCTTT TTTATTTTAG AAAATTAATT TTACATTTAC TAAAATTGAG CCAAAAATCT 28306 .......... .......... .......... .......... .......... .......... 859 TTTGAAAGAA ACTCTCTATC TTCGGTAAGT AATAATATAA TAATATAATT TGAATATATT 28246 .......... .......... .......... .......... .......... .......... 859 TACTCTTCTT TGAGCTTTAC TTATAAAATT AACGGAATAT GTTATTATTA TTATCATTAC 28186 .......... .......... .......... .......... .......... .......... 859 GAACAGGAGG AAACAAACAG CAGGCGGGTG GACTAAAGTC ACATAAGACA ACTGCACTTA 28126 | | |||| | | || | | | || | || | || | ||| | | ......CATT ACACAATC-G CA-GTGAAT- GAAGATAG-C GAATTATACA ATT....... 902 TTATGTTCCT GTTGTCTTTT TCTTTTGTAT TATATTTATA TTTAAATAAA ATAAAATACA 28066 .......... .......... .......... .......... .......... .......... 902 AAAATGACTA AAGCCAAACC TAAAATGAAA TGGCCAAAGT CAAAAACTTG CTGAAATTAC 28006 .......... .......... .......... .......... .......... .......... 902 TTGTAATTTT TCTTTTATTA AAATAATAAT AATTGTTTCT TCTTTTATAT TGTATTATAT 27946 .......... .......... .......... .......... .......... .......... 902 AATTTCCGTA ATTGTTTCTC TTTTTAGCGT GATTCTCCAT TCACCTTTTA CAAAAATACT 27886 .......... .......... .......... .......... .......... .......... 902 GCATAATATT CATTGGACTT GGAACCATCT ACTTTAATTT TTGTTCCTTT TCTTTTCTAA 27826 .......... .......... .......... .......... .......... .......... 902 TTTTTGTAAA TATTAATATA ACAGTATTGT TGACTGAGAT TAGGTTTAGA CTTTGTTTAC 27766 .......... .......... .......... .......... .......... .......... 902 TGGGCTTCGG CCCACTGTGA TTATATAACT ATATATATCT CGTTGTGCTA ATGGAAAACC 27706 .......... .......... .......... .......... .......... .......... 902 CAAGCAGTTG AATTTATCTC TTTCACTAAA TTCTACATGG TATCAGAGCC TCGACCGGGA 27646 .......... .......... .......... .......... .......... .......... 902 ATCTAACCCT AGCCGAGAGC CGACCATTTC CGCTACCGAC GTACGATCTC CTGATCGTCG 27586 .......... .......... .......... .......... .......... .......... 902 CCGCCGTCTT GCACGCCGAA GCCTCCGAAC GGCCGATCGC CACAGCCCCC ACGAGACGTC 27526 .......... .......... .......... .......... .......... .......... 902 ATGACTGCCG AGTCCACTCA ATCCAGCACT GTTTCCATCA CTGTTTCCAC GGTGATTGCT 27466 .......... .......... .......... .......... .......... .......... 902 GCGACTGTCC GACCGATCCA TGATCCGAGC TCCGTCTATT ATCTACACCC GTCAGAAGGT 27406 .......... .......... .......... .......... .......... .......... 902 CCGAGTAATT CTCTCACTAA ATACCTACTG AAGGGAGATA ATTTTGACGT TTGGGAGCAA 27346 .......... .......... .......... .......... .......... .......... 902 GCGATTTGTA ATGCGCTTGA AGGTAGAAGC AAGATTGGTT TTCTATATGA AAAGGGTTTT 27286 .......... .......... .......... .......... .......... .......... 902 CCAAAGCCGA CGAACGTTTT GGAACTTGAT GCCTGGAAAG CGAACAATTC CATCATTTGT 27226 .......... .......... .......... .......... .......... .......... 902 TCGTGGATTT TTAACAGCGC CGACGAGACG ATCCAGCCGA GTCTCGTCGC TCAAAAAATT 27166 .......... .......... .......... .......... .......... .......... 902 GCCCACGAAT TGTGGACCGA TATGAAGGCA CGATATGGAG GCACGAATGC TCCTAAATCG 27106 .......... .......... .......... .......... .......... .......... 902 TGGCAGTTAA AGTCTGACCT ACAAATGTTG AGGCAAAAAG GTCAGTCTGT AGTCTCGTAC 27046 .......... .......... .......... .......... .......... .......... 902 TACAATCAGT TCATCATTGT CTGGAACCAA TTGTATGGTT CGATTGATCC AACTTGCGGG 26986 .......... .......... .......... .......... .......... .......... 902 TGTATATGTC CTGCGGCTGC AAAAATGCGT CTTCGATTTG AGGAGGAGAA GACGCAGGCG 26926 .......... .......... .......... .......... .......... .......... 902 TTTCTCCTCG GGCTTGATGA TGCTCAGTTC GGGGCGACTC GCTCTCAGAT CTTCGGCACC 26866 .......... .......... .......... .......... .......... .......... 902 CGCCCACTTC CTGTTCTCAA CGAAGCCTAC TATCTTGTCT CTTAGGAGGA GAGATACAAG 26806 .......... .......... .......... .......... .......... .......... 902 TCGATTGTGC GTAACTGTGA TGACCGAACC GATGGGTTGA CATTCGCGGT TGAAACTCAA 26746 .......... .......... .......... .......... .......... .......... 902 CCCACACCAC CCCCGAAATA CAAGTGCACC CATTGCGGGA AAACTGGTCA CTCTGCCGAA 26686 .......... .......... .......... .......... .......... .......... 902 CGGTGTTTTC TTTTGGTCGG TTTTCCCAAT GGAGGAAGAG GGGGTTGTGT GGGCGGACGC 26626 .......... .......... .......... .......... .......... .......... 902 GGGGGTCGAG GAGGTCGTGG CCCACCTGGC CGTGAGCAGT CCACAAGTCG CGATAGCGGC 26566 .......... .......... .......... .......... .......... .......... 902 ACGGCTGCAC ACACCGACGG TCCAACGCCC GTACCAGCAT CGACGTCCGG CAGCAGCCAA 26506 .......... .......... .......... .......... .......... .......... 902 AGCGGGGTCC TTTTCGGGCT GTCGGCCGAG CAGATGACCC GACTATTGAT TATGCTCGAC 26446 .......... .......... .......... .......... .......... .......... 902 ACTCCTGCAC AATCAGGCAA TAACACGGGT AAGGTTCATG CTTTGTCACC CGATTGGTTA 26386 .......... .......... .......... .......... .......... .......... 902 ATTGATAGTG GTGCTTCACA CCACATGACG GGTAATTTTC CATCTCTTTA TGATATTATG 26326 .......... .......... .......... .......... .......... .......... 902 TCTGTCCCTG AGTGTTCTAT TGGCCTCCCG GATGGCACTC GTGTTATGGC CAATTACTGT 26266 .......... .......... .......... .......... .......... .......... 902 GGTAGTGTAC AGATTTCTGC CAATTTATTT TTGAGAAATG TGCTGTTCGT CCCTACCTTG 26206 .......... .......... .......... .......... .......... .......... 902 AAATGCAACT TGATCTCTAT TGGATGCCTG ATTGAGTTTA ACAATTATCG TGTGATTTTT 26146 .......... .......... .......... .......... .......... .......... 902 GATGATTGTT GTTGTGTGTT ACAGGACCGT GTTTTGACAA TGGAGATTGG TCGAGGTACG 26086 | | | .......... .......... ....G-CAGC .......... .......... .......... 907 GCTTTTAACG GAGTGTACGT GTTCCAGTCT CAAGCTTTCG TGTTAGCCTC TAGAGTCGAC 26026 .......... .......... .......... .......... .......... .......... 907 CAGGTCGAGT TGTTGCATAA GCAGCTTGGT CATCTGTCTC CTGCAATTTT ATGTTCCCCT 25966 .......... .......... .......... .......... .......... .......... 907 CCTTTTAATA AATCCCCCTC AGATATTAAA CAATTAGAGT CATGTGAGAT TTGTTTTTAT 25906 .......... .......... .......... .......... .......... .......... 907 TCTAAGCAAA CTCGCTCAAG TTTTTCTTCT AGTTCTAATA AAGCTGTTGA TTTAATTCAT 25846 .......... .......... .......... .......... .......... .......... 907 TGTGATTTGT GGGGTCCTTA CTCCACCTGT GTGTCTTCTG GGTCATATTA TTTTTTGACC 25786 .......... .......... .......... .......... .......... .......... 907 ATTGTGGATG ATCACTCTCG AGCTGTATGG GTGTACCTCA TAAGTGATAA AAGTGAGGTC 25726 .......... .......... .......... .......... .......... .......... 907 ACATCTTGTT TAAAACAGTT TTTTATGTTG ATCCAAACTC AGTACCATGA AACAATAAAA 25666 .......... .......... .......... .......... .......... .......... 907 ATTATTCGAT CTGACAATGG CACTGAATTT CTTAATACCC CCCTTCGTCA GTTTTACCAC 25606 .......... .......... .......... .......... .......... .......... 907 GACGTGGGCG TCCTCGTCCA AACATCATGT GTCGGAACGC CCCAACAAAA TGGGCGGGTC 25546 .......... .......... .......... .......... .......... .......... 907 GAGCGCAAGC GCCGTCACAT CTTAAACGTG GCGCGCTCTT TAATGTTTCA GGCGTCCCTC 25486 .......... .......... .......... .......... .......... .......... 907 CCTGTTGAGT TTTGGGGGGA GTATGTACGT ACTGCAGTTT ATCTCATCAA TCGCACACCT 25426 .......... .......... .......... .......... .......... .......... 907 AGGCGCCTTA TCGGTGGCAA GTCTCCGTTC GAAATACTAA ATAAAGCCCC ACAAGATATT 25366 .......... .......... .......... .......... .......... .......... 907 TCCCAGCTAC GTGTCTTCGG GTGTCTGTGT TTTGTCCGAA ACATCCAGCG TCCACCATAT 25306 .......... .......... .......... .......... .......... .......... 907 AAATTTGCAC CCCGTAGTCT CAAATGTATG TTCCTCGGTT ATCCTTCTGG GAAAAAAGGT 25246 .......... .......... .......... .......... .......... .......... 907 TGGCGGGTGT ACGATTTGGA GAATCATCGT TTCTTTCATA CACGTGACAT TGCATTTGAC 25186 .......... .......... .......... .......... .......... .......... 907 GAGACGATTT TTCCTTTCGC AACTACTCCT ACCACCTTGC CAGCCACGAC GTACACACCG 25126 .......... .......... .......... .......... .......... .......... 907 CCGGTCCAAC ACGCCGACTT TCCCATCGTT GTCTCCACTA CCCAGCCGAA CACCATTGCG 25066 .......... .......... .......... .......... .......... .......... 907 GTGCAGCAAC CCGAACCCAC CTCCGCCACA GAGTCCACGG CCACCGTCCC TCCCGTCGAC 25006 .......... .......... .......... .......... .......... .......... 907 CCGGGCGTGG TTTAGCCACT TGCCCGGGCT TCGGGTCGTG TTCGTCATCC GCCTGGATAC 24946 .......... .......... .......... .......... .......... .......... 907 CTTTCTGAAT ATGTGTTCCA GTCTGCTACG TCTGTACCTC CCTTTACTAG TCCTTCGACT 24886 .......... .......... .......... .......... .......... .......... 907 GCTCTTCGTT TAGGTACACG GTTCCCTATC ACTAACTACG TTCATTATGA AAAAATTGCA 24826 .......... .......... .......... .......... .......... .......... 907 TGACAGGTAT CGTGGTTTGT TGGCTGCCAT CTCTGCTACA GACGTCCCCC GGTCCTTTCG 24766 .......... .......... .......... .......... .......... .......... 907 GGATGTTGTT AAATTTGCCA ATTGGAGGGA GGCTATGCAA TCAGAAATTC GGGCTTTGGA 24706 .......... .......... .......... .......... .......... .......... 907 AAATAATCAG ACTTGGGTGT TGACTGATCT TCCCATCGAT AGGCGCGCTT TGGGGTGTCA 24646 .......... .......... .......... .......... .......... .......... 907 ATGGGTGTAC AAGACTGAAT TTCACGCTGA TGGGTCTAAA GAACGAGACA AGGCACGATT 24586 .......... .......... .......... .......... .......... .......... 907 GGTTATTTTG GGAAATCATC AGGAATTCGG AACAGGTTAT ACGGATACTT TCGCTCCAGT 24526 .......... .......... .......... .......... .......... .......... 907 TGCCCGAATG GGAACTGTAC GAATCTTATT ATCCGTTGCC GTAGCCAAGA ATTGGGAAAT 24466 .......... .......... .......... .......... .......... .......... 907 TCACCAACTT GATGTGAATA ACGCCTTTTT ACACGGGGAC CTTACTGAGG AGGTCTACAT 24406 .......... .......... .......... .......... .......... .......... 907 GCGGCTTCCA CCCGGTTATT CTAATGCAAG CCCCGGCAAA GTTTGTCGAC TGAGAAAATC 24346 .......... .......... .......... .......... .......... .......... 907 TCTCTATGGT CTACGACAAT CACCCAGGAA CTGGTTCGAG AAACTGACAA TTGCATTGAG 24286 .......... .......... .......... .......... .......... .......... 907 GTGTTATGGT TTCAAACAGG CTCATAAGGA TCATACGCTC TTCATTTTTC GACGTGGCAC 24226 .......... .......... .......... .......... .......... .......... 907 CGACTTCCTG GCTATCTTAA TTTATGTCGA CGACATCTTA GTCACAGGTA ACAACCCCAG 24166 .......... .......... .......... .......... .......... .......... 907 TTTATGTGCT TCCTTCATAA AAAATATTTA CACAATTGTT TTCAGCTGAA GGATTTGGGG 24106 || | || .......... .......... .......... .......... .......... .GAAAT-AGG 915 CCTTCAAAAT ATTTTCTGGG AATCGAATGT GCCCGCTCTT CAACTGGTTT AGTGTTGTGC 24046 || ||||| CCATCAAA.. .......... .......... .......... .......... .......... 923 CAACGCAAAT ATGCACTGGA AATTTTACAG AAAGCCGGAC TCACCGACTG TAAGCCGGCC 23986 .......... .......... .......... .......... .......... .......... 923 GCGACCCTTC TGTCCCTTGG TCACAGCTTG GCCACGTAGA CCAATGCGCC AATTCACGAT 23926 .......... .......... .......... .......... .......... .......... 923 CCCGGCAAAT ATCGTCGATT GGTTGGCCGT CTCATTTATC TGACGATAAT GCACCCGGAC 23866 .......... .......... .......... .......... .......... .......... 923 TTGGCCTATT ATGTTCATCT CTTGTCCCAG TTTATGCACG AGCCCAGAGT TGACCATCTC 23806 .......... .......... .......... .......... .......... .......... 923 AACGCTGCTC TGCACGTGCT CCGTTACCTC AAGGGTTATC CGGGTCAGGG CATTCTTCTC 23746 .......... .......... .......... .......... .......... .......... 923 CGGGCTGATA GTAATTTGCA GATTTTGGCC TATTGTGATT CTGATTGGGC TACTTGTCCT 23686 .......... .......... .......... .......... .......... .......... 923 GTCAGCGGCT ATTTTGTTTT GTTGGGGGCT CTCCCATTTC TTGGAAGACC AAGAAACAGA 23626 .......... .......... .......... .......... .......... .......... 923 CTACAGTCTC TCGTTCTTCC GCAGAAGCTG AGTACCGTGC CATGGCTGAC ACTTGTTACA 23566 .......... .......... .......... .......... .......... .......... 923 AAATTCGGTG GATTCAGCAT ATCCTCGGAT GTCTCGGAGT CGCGGCTACT TCACTTCCGA 23506 .......... .......... .......... .......... .......... .......... 923 GGTTATATTG TGATAACCAA TCTGCTCTTT ATATCGCAGC TAATCAAGTG TTTCACGAGC 23446 || ||| | || | ||| .......... .......... .......... .........T TATACAA-T- TTAGGCCAGC 942 GAATGAAACA TGTCGACATT GATTGCCATA TTGTACGCGA ATGCGTACGC CGTCACGAGC 23386 |||| | ||| | | || || || | | || ||| GAATTATACA ATTGTATATG TATAGCGA-A TTATAC.... .......... .......... 977 TCTCAACCCA CTACGTTCCC ACGCGCCTCC AGCGTGCTGA TTTGTTTACT AAACCTCTAT 23326 .......... .......... .......... .......... .......... .......... 977 CTCATCCCTG TTTTTCGTTT CTTTTATCCA AGTTGGGCAT TCACGATGTC ATGCTCCAAC 23266 .......... .......... .......... .......... .......... .......... 977 TTGAGGATGA GTGTTGACTG AGATTAGGTT TAGACTTTGT TTACTGGGCT TCGACCCACT 23206 .......... .......... .......... .......... .......... .......... 977 ATGATTATGT AACTATATAT ATCTCGTTGT GCTAATGGAA AACCCAAGCA GTTGTATTTA 23146 .......... .......... .......... .......... .......... .......... 977 TCTCTTTCAC TTAATTCTAC AAGTATTATT TAACATATTG TAAAGTTAGG TCTATCCCTA 23086 .......... .......... .......... .......... .......... .......... 977 TTTTGACTTA AAGGGTTCCC GTAAAATTTA AAACATTTTG TACTTCCTTT CTTTTTTGTA 23026 .......... .......... .......... .......... .......... .......... 977 TTTGGTTAGT TTAAATATTT TAAAACATAA AACACAAGTT AACTTTCCGC AAATTTAAGA 22966 .......... .......... .......... .......... .......... .......... 977 AAAATGACTT TCCTTAAAAA GTAAGGAAAA TATTTTCAAA ATAATTTTGA ACTTCACACC 22906 .......... .......... .......... .......... .......... .......... 977 TCAACTTTCC ATTCTAATTT AAGTCTGGGA TATTGATCCT CAATATATTA GAGGTTGAAT 22846 || || | .......... .......... .......... .......... .......... .AGTTTTATG 986 TTCGGGGGGT GGGGGGGTGG GGGGGAGTGG GGTAGGTCTC AGGTCGTGTG TCAAGTCTCG 22786 || | | TTTGCTATG. .......... .......... .......... .......... .......... 995 GGTCGGGTTT GAGTCTCGAA TAGGGTATCA AGGTCCTGTC TTAGCGGGGT AAGATTGATA 22726 .......... .......... .......... .......... .......... .......... 995 TCGAGCCTCG GGTCAAGTGT CGAGGTCAGG GTTGGGGTCG GGTCTTGGAT CGAATGTCAG 22666 .......... .......... .......... .......... .......... .......... 995 GGTCGGGTCT AGGGTCGAAT GTTGGGGTTG GATTCTGTTT CAAAAGTTGG AGTTTGAGTT 22606 .......... .......... .......... .......... .......... .......... 995 GGATGTTGGG GTTGCAAGTC GGAGTTGTGT CTTGGACCGG GGTCGGTGTT TAGGGTGAGT 22546 .......... .......... .......... .......... .......... .......... 995 TCGGGTCTCG AGTTAAGTGT AGGTGCCGAG ATCGTATTCT AGTTCGAACG TCGGGGTCTT 22486 .......... .......... .......... .......... .......... .......... 995 AGTAGGGTTA GGTCATGGGT TTGTTCTTGG GATCTTGTCC TGATTCGAGT CATGGTCACC 22426 .......... .......... .......... .......... .......... .......... 995 ATCGGGTTTC AGTTCAAATT TCATGACTCA TGTCAGGTGT ATGGATCAAG TTCCGAATCA 22366 .......... .......... .......... .......... .......... .......... 995 AATGTCCATA TCAGGTCCAT GTCGGGAATA AGAATCAGGT TTCAAATCGG GTGTCCTAAG 22306 .......... .......... .......... .......... .......... .......... 995 CTATCTTATT ATATTTGTTA CAAGAAATAC TGAAGTTAGC ATAAATTGAT TCTTACTAAT 22246 .......... .......... .......... .......... .......... .......... 995 TCACATAAAA TATTTATACA CTTCTCTCTT GCAGGAGGGA AATTAAATAA GTTAGGTCCT 22186 ||| | ||||| || .......... .......... .......... ....GAGCGC AATTATGCAA .......... 1011 TTTCCAAAAT TCTAGGTTAC AATAAGATTG TTAAATTGTG ATATGTCAAC AGCCAAAAAG 22126 .......... .......... .......... .......... .......... .......... 1011 GTAAAGGGGT TGCATTTTTA ATGTTAAAAC AGTCACAATT TGTTAGTTAG TCTGCCATTT 22066 .......... .......... .......... .......... .......... .......... 1011 ACTCCAAAGT CTTTTCTCCT TTTGACGAAC TTTCAAATTT TGATAACATA CATTGCGTAA 22006 | || | |||||||| || .......... .......... .......... ....ACTTTG TTATAACATA CAAATA.... 1033 CCACTTCCTC TTTATTAATT AGTCAAATCA TACTATTTTC AAAGAATGAT GCTTAACGGA 21946 .......... .......... .......... .......... .......... .......... 1033 CCATTCTTTT CCTAAGATGA CTCATCCATA TCTGAGAAGA ATATAGTATA TACATATTTT 21886 .......... .......... .......... .......... .......... .......... 1033 ATTTTTGTCT CATAATGAAA TAACAATATT ATTATTAATA TTTTTTCTAA ATCATCTTTT 21826 .......... .......... .......... .......... .......... .......... 1033 TTTTTAAAGT TTTATATCTA AATTATTGAA AGTGTTAAAA AAACACTTAA ACTATCATAA 21766 .......... .......... .......... .......... .......... .......... 1033 AATAATTTAA GAAATTAAAC ATGAATGTTG ACTCGACCAA ATGGTGTAAT GTGTATTATA 21706 .......... .......... .......... .......... .......... .......... 1033 TACACACTTA GGTACGTCTG ATCTTAAATT TTCATTCACG TGGCTTCTTC GTTTTTTGCT 21646 .......... .......... .......... .......... .......... .......... 1033 GACACATAAA AACATTTAAA AAAATATTTT GAATTGATTT TTAAAATTCT ATATATACTC 21586 .......... .......... .......... .......... .......... .......... 1033 TCCCTTTCTT TTTTTTTTCT TTCATTTCTT CACTTCTATC ACATATTTTT CTAACATTCT 21526 .......... .......... .......... .......... .......... .......... 1033 CATCCTTCTC CTTCATTATT TATCAACATT CTTCTCCACT TCATTTTAAT AGTTAACTTA 21466 .......... .......... .......... .......... .......... .......... 1033 TTGCCATGGT GGAATTGTTT TTCCCGTGAT AATTCAAATG ACAATCTTTT TAAAAAAAAT 21406 .......... .......... .......... .......... .......... .......... 1033 TTATAAAAGA GAAAACGTAA TATAAATTCA GTAATGTAGG TTGGATATTA TTTGCCCTAA 21346 .......... .......... .......... .......... .......... .......... 1033 ATTTCTTACC ATAAATAGGT TTTCCTTTTA GGAAAAAGTT TTGGAATGAC TAATATTTTT 21286 .......... .......... .......... .......... .......... .......... 1033 CTGGTAGGAA AAAGTTTAGG ACTCTATAAA TAGAGGCATG TTTCTTCTAA CTTAATCAGC 21226 .......... .......... .......... .......... .......... .......... 1033 ATTCACAATG TAGTCTTAAA TGCTTTGAGA GTTTTGGTTA GGTGGAGAAT TTATGGGTTA 21166 .......... .......... .......... .......... .......... .......... 1033 CAAGCTTGAT ATGTTATCAC TTGTGAACCT CGCATGTATT TCGAGTGAAT TGATTGAGGT 21106 .......... .......... .......... .......... .......... .......... 1033 TGTTTTTCTC TGTATTTTGT ACTCTCATAT TTATAGTGGA TTGCTCATCT CCTTTGTGGA 21046 || | || | .......... .......... .......... ......TGAA TTTTTT.... .......... 1043 CGTAGGTCGA TTGACCGAAT CACGTTAAAT CTTTGTGTCT TTTGATATAT TTCTCGTTTA 20986 .......... .......... .......... .......... .......... .......... 1043 TTCTTACTCG TGGTCTTTTG AGGTTTGCTT TGCTAGCTTC CGCGTTTACA CCTTCTTATT 20926 .......... .......... .......... .......... .......... .......... 1043 TCCGGTCCTA ACAATGTAAC CATTTTCTAT ACTTAAGATT TGGCTACTTG TCAATATTCA 20866 .......... .......... .......... .......... .......... .......... 1043 AGGACCCTAA ATTATCCTTT TTCTAATAAG TCAAATAAAA CTTATATATG TCGCCATATT 20806 .......... .......... .......... .......... .......... .......... 1043 GATCATAGTA TTACATGAAA TTAAATTTCC CATTCATTTT TGTATATAAA TATCATATTC 20746 .......... .......... .......... .......... .......... .......... 1043 TTGCAATATC CTTCTTTTTT CATCTCCTTT TGGTGTGCTT TGTTTTGTGC CCTGGAAGCT 20686 .......... .......... .......... .......... .......... .......... 1043 GGGTCATTTA CAATGGTGCA AAGACCACAA AAACATGTTC ATTTTGTGGT GAAAAACTAT 20626 .......... .......... .......... .......... .......... .......... 1043 AGGCTTAGTC CTGGAGTTGG TCATCCTAAC TATAAACATA CAAGGGCAAC TAGTAATTTA 20566 .......... .......... .......... .......... .......... .......... 1043 TTTATTTTTG ATTTTGGTTT GTTTTCCTTT TCTCTAGTTG GAAAGCACAT TAAATGCGTA 20506 .......... .......... .......... .......... .......... .......... 1043 ATGTTGAGAT TTAATATA 20488 || || |||| ........AT TTGCTATA 1053 hqPGS_C08HBa0294K15.1-_SGN-U315404- (29496 28956) ******************************************************************************** EST sequence 52 +strand 955 n (File: SGN-U329379+) 1 CAACAAAAGG ATTCACAACC AAAGTGGGAA GCAAAAGTCT CAACAACATT ACACAAGGCA 61 AGTGCAGACC AAATATTTTC TCTTTTCAAA GATTTTTTTG GGCTAAACAA ATGGTTTCCC 121 AGCTTGTCAA CATGTTATGG CATCCACGGC GAAAATGGCG AGGCCGGTTG CATACGATAC 181 TGTACCGGAT TCTCTCTCCC TCCGGAGAGA GGTGGTGGTG CCACCGGAGA AGCCCCGGTG 241 AGCGGTTGGT CTAAGGAGAG GTTGGTGGCT ATTGATCCAA CGGAGAGGAT ATTAAGTTAT 301 GAGATGGTGG ATTGTAACAT TGGGTTTAAG TCATACTTTT CAACGGTCAA GATTGTTCCA 361 AATGGAGTTG ATGGATGTGT GATTGAGTGG TTTATCACCG TTGATCCAGT TGAAGGGATG 421 AGATTGGAGG ATTTGGTCAA CAAGTATGAT GTTGGCCTGC AAGGAATGGC TAAGAACATG 481 CAAAATGCCC TAACAAGTTC ATAAGTTTTT TTTAATTTTG GGGGGATTTT ATGTTTATTA 541 TTTCCTATGT CATATATTAA TGATATGAAT TCTACTTAAT TAATATTTCT TCCCTGAATT 601 AACTCAATAT TAATAAATTG AGGGTATAAT AAGAAAATAA GTATCGTCAT TTTTTAATTT 661 ATCAATAAAT TAAAAAAGTA GAAATGGTGT AGAAGTAGAT TCAAATTGTG TGGATACAAT 721 AATTTATGCT TTGCAGGACT TGCTTTCATA TAATTTTATT TGCACTTTCT ACAAAGCATT 781 GAATCATTGT ACATGATCTA TTCCTAGTCG AATCTTTTAT ATTGAGAACC CATACATATG 841 AAATGATATA AAACTCCAAC ATTTTTATCA GAAAAGTAGC TCCCAAAAAA CACAATAAAT 901 ATTACTTCTG ATGAAAACGT ATGTTTGAAA AAAAAAAATC ACTAAAAAAA AAAAA Predicted gene structure (within gDNA segment 29782 to 32108): Exon 1 30382 31329 ( 948 n); cDNA 1 949 ( 949 n); score: 0.987 MATCH C08HBa0294K15.1+ SGN-U329379+ 0.987 948 0.993 C PGS_C08HBa0294K15.1+_SGN-U329379+ (30382 31329) Alignment (genomic DNA sequence = upper lines): CAACAAAAGG ATTCACAACC AAAGTGGGAA GCAAAAGTCT CAACAACATT ACACAAGGCA 30441 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACAAAAGG ATTCACAACC AAAGTGGGAA GCAAAAGTCT CAACAACATT ACACAAGGCA 60 AGTGCAGACC AAATATTTTC TCTTTTCAAA GATTTTTTTG GGCTAAACAA ATGGTTTCCC 30501 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTGCAGACC AAATATTTTC TCTTTTCAAA GATTTTTTTG GGCTAAACAA ATGGTTTCCC 120 AGCTTGTCAA CATGTTATGG CATCCACGGC GAAAATGGCG AGGCCGGTTG CATACGATAC 30561 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCTTGTCAA CATGTTATGG CATCCACGGC GAAAATGGCG AGGCCGGTTG CATACGATAC 180 TGTACCGGAT TCTCTCTCCC TCCGGAGAGA GGTGGTGGTG CCACCGGAGA AGCCCCGGTG 30621 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTACCGGAT TCTCTCTCCC TCCGGAGAGA GGTGGTGGTG CCACCGGAGA AGCCCCGGTG 240 AGCGGTTGGT CTAAGGAGAG GTTGGTGGCT ATTGATCCAA CGGAGAGGAT ATTAAGTTAT 30681 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCGGTTGGT CTAAGGAGAG GTTGGTGGCT ATTGATCCAA CGGAGAGGAT ATTAAGTTAT 300 GAGATGGTGG ATTGTAACAT TGGGTTTAAG TCATACTTTT CAACGGTCAA GATTGTTCCA 30741 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGATGGTGG ATTGTAACAT TGGGTTTAAG TCATACTTTT CAACGGTCAA GATTGTTCCA 360 AATGGAGTTG ATGGATGTGT GATTGAGTGG TTTATCACCG TTGATCCAGT TGAAGGGATG 30801 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGGAGTTG ATGGATGTGT GATTGAGTGG TTTATCACCG TTGATCCAGT TGAAGGGATG 420 AGATTGGAGG ATTTGGTCAA CAAGTATGAT GTTGGCCTGC AAGGAATGGC TAAGAACATG 30861 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATTGGAGG ATTTGGTCAA CAAGTATGAT GTTGGCCTGC AAGGAATGGC TAAGAACATG 480 CAAAATGCCC TAACAAGTTC ATAAGTTTTT TTTAATTTTG GGGGGATTTT ATGTTTATTA 30921 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAATGCCC TAACAAGTTC ATAAGTTTTT TTTAATTTTG GGGGGATTTT ATGTTTATTA 540 TTTCCTATGT CATATATTAA TGATATGAAT TCTACTTAAT TAATATTTCT TCCCTGAATT 30981 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCCTATGT CATATATTAA TGATATGAAT TCTACTTAAT TAATATTTCT TCCCTGAATT 600 AACTCAATAT TAATAAATTG AGGGTATAAT AAGAAAATAA GTATCGTCAT TTTTTAATTT 31041 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACTCAATAT TAATAAATTG AGGGTATAAT AAGAAAATAA GTATCGTCAT TTTTTAATTT 660 ATCAATAAAT TAAAAAAGTA GAAATGGTGT AGAAGTAGAT TCAAATTGTG TGGATACAAT 31101 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCAATAAAT TAAAAAAGTA GAAATGGTGT AGAAGTAGAT TCAAATTGTG TGGATACAAT 720 AATTTATGCT TTGCAGGACT TGCTTTCATA TAATTTTATT TGCACTTTCT ACAAAGCATT 31161 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTTATGCT TTGCAGGACT TGCTTTCATA TAATTTTATT TGCACTTTCT ACAAAGCATT 780 GAATCATTGT ACATGATCTA TTCCTAGTCG AATCTTTTAT ATTGAGAACC CATACATATG 31221 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAATCATTGT ACATGATCTA TTCCTAGTCG AATCTTTTAT ATTGAGAACC CATACATATG 840 AAATGATATA AAACTCCAAC ATTTTTATCA GAGAAGTAGC T-CCAAGAGA CACAAATAAA 31280 |||||||||| |||||||||| |||||||||| || ||||||| | |||| | | ||| |||||| AAATGATATA AAACTCCAAC ATTTTTATCA GAAAAGTAGC TCCCAAAAAA CAC-AATAAA 899 TATTACTTCT GATGAAAACG TATGTTTG-A AAAAAAAAAT CACTTTTAAA 31329 |||||||||| |||||||||| |||||||| | |||||||||| |||| ||| TATTACTTCT GATGAAAACG TATGTTTGAA AAAAAAAAAT CACTAAAAAA 949 hqPGS_C08HBa0294K15.1+_SGN-U329379+ (30382 31329) ******************************************************************************** EST sequence 99 +strand 1311 n (File: SGN-U321315+) 1 AAAAACCCCA TTCACAAAAG CTTCATTCTT CAATTTTCAC ATAATTTTTT TTTTCTTCAT 61 TTGATGGAAT CTTCGTTGCC GGTGGAGGAG CTTACTTCCG GCGCAAGTGG TCGGATAATT 121 CCTCTTTTCA AAAATCTTCA CCGGTCAGTT TTCTCATACC AAACTTACCG GAGACTAATT 181 ATATTTATAC AGTCTATTTT CCTATGGGTA ATTCTTCTGT CTCGACGGAG GTTCTCCACG 241 TCACCTTCGT CTCCTCCGCC TTCGCCATCT GCAGCTACTA CGGCGGTGTT GGGGAAGAGG 301 AGGAAATTTG CTTTGCGGAG GGATGAAGAG GATACGCAGA GAAGGAGGGC TCTTGCTGAG 361 GCGTTAGATA TGACGGTTGA GAATGACGGT GTGAGCTGCC GTTGGAATAC GTCTTTGTTC 421 TTTGGGGCTC GTCGGAATGC TTTGTTTTGC CGATCGTGGT TTCCGGTTAC AGATGAATTG 481 AGGGGCATAA TTATCATCAT CCATGGACTG AATGAGCACA GTGGACGATA TGCTCATTTT 541 GCTAGGCAAC TGAACTCCTG CAACTTTGGG GTGTATGCAA TGGACTGGAT AGGTCATGGA 601 GGGAGTGATG GATTACATGG ATACGTGCCA TCTTTGGACC ATGTTGTGGC AGACACAGGG 661 GCTTTCTTGG AAAAGGTCAA GTTTGACAAC CCTGGTATAC CATGCTTCCT CTTTGGTCAT 721 TCAACGGGAG GAGCGGTGGT CTTAAAGGCA GCTTCTTATC CACATATTGA AAACATGGTG 781 GAGGGCATCA TATTGACTTC ACCAGCATTG CGTGTGAAAC CTGCAAATCC TATTGTTAGT 841 GCTGTGGCAC CAATTTTTTC ATTGGTTGCA CCTAGGTACC AGTTCAAAGG TTCTCACAAA 901 AGGGGAATCC CTGTTTCAAG GGATCCTGCC GCACTGGTGG CTAAGTATTC TGACCCTCTA 961 GTGTATACTG GGCCTTTGAG GGTGAGGACA GGGCATGAGA TTCTGCGTAT CTCGTCTTAC 1021 TTGATGCGGA ACTTCAAGTC AGTCACTGTC CCATTCTTAG TCCTCCATGG ATCTGCTGAT 1081 AGAGTGACTG ATCCATTGGC TTCTCAAGAT TTGTACAATG AGGCTGCTTC TGAATTCAAA 1141 GACATTAAAC TTTATGATGG ATTCTTGCAC GATCTTCTAT TTGAGCCTGA GCGTGAAGAA 1201 ATTGCCCAGG ATATCATTGA TTGGATGCAC AAGAAGTTAG ATTCTGGCAA TCTTGCAAAT 1261 GTGTATAGTC AGTGCTAGTT TTCTAAATCA TTAGTGTTTT GATTGATCAA A Predicted gene structure (within gDNA segment 47505 to 42559): Exon 1 46905 46425 ( 481 n); cDNA 1 482 ( 482 n); score: 0.995 Intron 1 46424 45119 (1306 n); Pd: 0.988 (s: 1.00), Pa: 0.995 (s: 0) Exon 2 45118 45080 ( 39 n); cDNA 483 521 ( 39 n); score: 1.000 Intron 2 45079 44893 ( 187 n); Pd: 0.955 (s: 0), Pa: 0.957 (s: 1.00) Exon 3 44892 44822 ( 71 n); cDNA 522 592 ( 71 n); score: 1.000 Intron 3 44821 44296 ( 526 n); Pd: 0.951 (s: 1.00), Pa: 0.993 (s: 1.00) Exon 4 44295 44231 ( 65 n); cDNA 593 657 ( 65 n); score: 1.000 Intron 4 44230 44008 ( 223 n); Pd: 0.991 (s: 1.00), Pa: 0.993 (s: 1.00) Exon 5 44007 43918 ( 90 n); cDNA 658 747 ( 90 n); score: 1.000 Intron 5 43917 43837 ( 81 n); Pd: 0.783 (s: 1.00), Pa: 0.982 (s: 1.00) Exon 6 43836 43744 ( 93 n); cDNA 748 840 ( 93 n); score: 1.000 Intron 6 43743 43640 ( 104 n); Pd: 0.954 (s: 1.00), Pa: 0.998 (s: 1.00) Exon 7 43639 43169 ( 471 n); cDNA 841 1311 ( 471 n); score: 1.000 MATCH C08HBa0294K15.1- SGN-U321315+ 0.998 1310 0.999 C PGS_C08HBa0294K15.1-_SGN-U321315+ (46905 46425,45118 45080,44892 44822,44295 44231,44007 43918,43836 43744,43639 43169) Alignment (genomic DNA sequence = upper lines): AAAAACCCCA TTCACAAAAG CTTCATTCTT CAATTTTCAC ATAA-TTTTT TTTTCTTCAT 46847 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| AAAAACCCCA TTCACAAAAG CTTCATTCTT CAATTTTCAC ATAATTTTTT TTTTCTTCAT 60 TTGATGGAAT CTTCGTTGCC GGTGGAGGAG CTTACTTCCG GCGCAAGTGG TCGGATAATT 46787 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATGGAAT CTTCGTTGCC GGTGGAGGAG CTTACTTCCG GCGCAAGTGG TCGGATAATT 120 CCTCTTTTCA AAAATCTTCA CCGGTCAGTT TTCTCATACC AAACTTACCG GAGACTAATT 46727 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCTTTTCA AAAATCTTCA CCGGTCAGTT TTCTCATACC AAACTTACCG GAGACTAATT 180 ATATTTATAC AGTCTATTTT CCTATGGGTA ATTCTTCTGT CTCGACGGAG GTTCTCCACG 46667 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATTTATAC AGTCTATTTT CCTATGGGTA ATTCTTCTGT CTCGACGGAG GTTCTCCACG 240 TCACCTTCGT CTCCTCCGCC TTCGCCATCT GCAGCTACTA CGGCGGTGTT GGGGAAGAGG 46607 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACCTTCGT CTCCTCCGCC TTCGCCATCT GCAGCTACTA CGGCGGTGTT GGGGAAGAGG 300 AGGAAATTTG CTTTGCGGAG GGATGAAGAG GATACGCAGA GAAGGAGGGC TCTTGCTGAG 46547 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGAAATTTG CTTTGCGGAG GGATGAAGAG GATACGCAGA GAAGGAGGGC TCTTGCTGAG 360 GCGTTAGATA TGACGGTTGA GAATGACGGT GTGAGCTGCC GTTGGAATAC GTCTTTGTTC 46487 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGTTAGATA TGACGGTTGA GAATGACGGT GTGAGCTGCC GTTGGAATAC GTCTTTGTTC 420 TTTGGGGCTC GTCGGAATGC TTTGTTTTGC CGATCGTGGT TTCCGGTTAC AGATGAATTG 46427 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGGGGCTC GTCGGAATGC TTTGTTTTGC CGATCGTGGT TTCCGGTTAC AGATGAATTG 480 AGGTAGGTTC ATTTTCGAAA TATTGTTATG TTTGTTTTTA TAAAGATAGA ATTGAGGTGA 46367 || AG........ .......... .......... .......... .......... .......... 482 AGGGGTTTGT AGAAGGTTGA TGGTTTATGT ATAATATAAG CAAGTCAATT TATGATAAAG 46307 .......... .......... .......... .......... .......... .......... 482 CATGAATAAA GAGGATTCAT ACAGGTAATT AATTTGGAAT TGAGTCATAC ATCATGTTTA 46247 .......... .......... .......... .......... .......... .......... 482 TTAATTTTGC AATCACGGGT GTGTGGAGGT ATGGGGATCT AATATATGGG AGGAAAAAAC 46187 .......... .......... .......... .......... .......... .......... 482 CGAATTGAAC GAATGAAGGT GTGGCCTAGT GCTCAATAAA GTGGATTGAG TTCTTAGGTT 46127 .......... .......... .......... .......... .......... .......... 482 CAAAACACTA GTGATTTCTT CCCCGTGTTT TAGCCTTGTG CGCACAAGCT GGTCTGGACG 46067 .......... .......... .......... .......... .......... .......... 482 CAAGGGTTAT CAAAATAAGA CTTTGATTTT GATACTAACT TGGCAAAGAA TTGTTCCTTC 46007 .......... .......... .......... .......... .......... .......... 482 GTCGTGTTTT GGGGGAATGG GGTGAATTGG GATATGGTTA TTTCAGCATT GAAGTATGGA 45947 .......... .......... .......... .......... .......... .......... 482 AAATATAACT GCATGGGTTC ATCACCCCTT GCTGACTTTC ATTTACCTCA AGTACAGAAG 45887 .......... .......... .......... .......... .......... .......... 482 GCAGTTAAGC ATACCCAATG AAACTATTTT TCATTTCTAT GTTAGCTTTA CCCCATGTGA 45827 .......... .......... .......... .......... .......... .......... 482 TTTATTTGAC TTGATTTTAT TAACAGATAT ACTAGGGATG CTCATTTTCA GTTTTTTCTG 45767 .......... .......... .......... .......... .......... .......... 482 ATAAATTACT CTCCTTTAAC AAGAAAATTG CAAGTATTTG AAGTGATAAT TTGTACATGA 45707 .......... .......... .......... .......... .......... .......... 482 GTATCTTATT TTGTTTGTGC ATGGTCGTTT TATATTGCAT ATGAGAACAA ATAGACATGA 45647 .......... .......... .......... .......... .......... .......... 482 ATTTGATTGG CAAGTTAAGA GCATTAATAT TGAGTTTTTA AAATTATTCT ACTTTGCTAG 45587 .......... .......... .......... .......... .......... .......... 482 GACATGAAAT GCAAGCCAGA ATCTACCAGT GATCAAATGT GTTTTACTGC TTTCATCAGG 45527 .......... .......... .......... .......... .......... .......... 482 AAAAAGGCTT AGGTTGAATT TCCTAGACTT GGCTTCACGT TTTAGACAAT TCCTCCTTAA 45467 .......... .......... .......... .......... .......... .......... 482 ATCCTTTAAG GTAGAGTGCT ATCTTAGAAG GCGAGTGATT TCCATTTGAA TAGATCGATC 45407 .......... .......... .......... .......... .......... .......... 482 AATATTAGAC TTATAAGAGA AAACTAAAAA CTGTGCATCA CTATTGCTCC TGATCATAGT 45347 .......... .......... .......... .......... .......... .......... 482 AATCCTAAGC TTGTTATAGA ACATTAGGAA TACCCTTTCT CTTTTTATTG CTAAGGCTGA 45287 .......... .......... .......... .......... .......... .......... 482 GTCTGATAAT TTGACAAAAT TCACTCACTT TGTTGGGGTA TTAAGGAGCA GTAGTGCTGC 45227 .......... .......... .......... .......... .......... .......... 482 AAGTTCTGAT ATTTATGTTT GCTAATCTAC TATAAATTGA CCATCTCTCT TTTAATGTTT 45167 .......... .......... .......... .......... .......... .......... 482 TAGTGTTTTT CTTTAATTGT TTCTTAATGG ACGGATTTTT CGTTTCAGGG GCATAATTAT 45107 || |||||||||| .......... .......... .......... .......... ........GG GCATAATTAT 494 CATCATCCAT GGACTGAATG AGCACAGGTA ACTGTTCATT GACTTTTGAA AATAAAATGT 45047 |||||||||| |||||||||| ||||||| CATCATCCAT GGACTGAATG AGCACAG... .......... .......... .......... 521 TGGGAGGAGA GGGGTAGCTG TTTTTTTTTT TTTTTGAAGA ATAGGTGTTT TTGCTAATGC 44987 .......... .......... .......... .......... .......... .......... 521 GAGTTGTTTA AGCCTTCTCA GTTCAGTATT GAGTACAGAA CAAATGTTGG CTTAACTAGT 44927 .......... .......... .......... .......... .......... .......... 521 TGGATGACGA TATTCCTTTT ATATTTCATT TCAGTGGACG ATATGCTCAT TTTGCTAGGC 44867 |||||| |||||||||| |||||||||| .......... .......... .......... ....TGGACG ATATGCTCAT TTTGCTAGGC 547 AACTGAACTC CTGCAACTTT GGGGTGTATG CAATGGACTG GATAGGTACT TTTATCCTTC 44807 |||||||||| |||||||||| |||||||||| |||||||||| ||||| AACTGAACTC CTGCAACTTT GGGGTGTATG CAATGGACTG GATAG..... .......... 592 ATTTTGAAGA CCTTGTTTAA ATTGGTTAGA GGTCCTGTAG TGACCACTTT ATGATCGCAC 44747 .......... .......... .......... .......... .......... .......... 592 ATTCTAGTAT TTCACTCTAA TCATGTGAAA GGGTAACACA GTCATTCTTA GGATGCTAAA 44687 .......... .......... .......... .......... .......... .......... 592 ACAAACTTGC CTTATCGTTA GAATGGCTAC CAAAAGGTCA ATTATGGAAG AGTGTGTGTA 44627 .......... .......... .......... .......... .......... .......... 592 TAACTTCATC ATTTTCTTTC TCATTGTGTC TGTTCAATCG TGGTCCTTTC TTTATATTCT 44567 .......... .......... .......... .......... .......... .......... 592 TTTCCATGGA TGAAGTTGGT CCTTTTTTCC CTGATGTTTC TTTACTAGAT AGCCTCTTAT 44507 .......... .......... .......... .......... .......... .......... 592 CAGGATTATA CTTCTCTCAC AGATACCTCA CAAAGTTTGT TCTTCTTCTA AAATGTGTTG 44447 .......... .......... .......... .......... .......... .......... 592 ATTTTGGGCT ACATGCATTA AGTATGTCTT CCTCTGATTC ATGGATAATT AAATAAGCTT 44387 .......... .......... .......... .......... .......... .......... 592 CTCTGAGCTG ATTGTTATGA TTGATTATGC TAGTAGTCAA AGTGGATGGT TGATACTTCT 44327 .......... .......... .......... .......... .......... .......... 592 TAACAAATGA CAGAGTTATT CTGTGTGACA GGTCATGGAG GGAGTGATGG ATTACATGGA 44267 ||||||||| |||||||||| |||||||||| .......... .......... .......... .GTCATGGAG GGAGTGATGG ATTACATGGA 621 TACGTGCCAT CTTTGGACCA TGTTGTGGCA GACACAGTAA GTTGTCACTG TTTTTATTTT 44207 |||||||||| |||||||||| |||||||||| |||||| TACGTGCCAT CTTTGGACCA TGTTGTGGCA GACACA.... .......... .......... 657 TCATGCTCCA TCTCTGCCAT ATATGAACTC TTTTCCTTGA GGATTCTATT CCTATTATTT 44147 .......... .......... .......... .......... .......... .......... 657 TCTTGAACTG GATAGCCACT CCTAAGTAAC AAGCTGAAAC TGTGATCTTC ATTCTACATT 44087 .......... .......... .......... .......... .......... .......... 657 CATCTTTCTT TCATTGTTTT CTTGCCTCAT CCATAGAGCC TGCCAATTTA CCCACTATAT 44027 .......... .......... .......... .......... .......... .......... 657 TCTTTTCATG TTTATACAGG GGGCTTTCTT GGAAAAGGTC AAGTTTGACA ACCCTGGTAT 43967 | |||||||||| |||||||||| |||||||||| |||||||||| .......... .........G GGGCTTTCTT GGAAAAGGTC AAGTTTGACA ACCCTGGTAT 698 ACCATGCTTC CTCTTTGGTC ATTCAACGGG AGGAGCGGTG GTCTTAAAGG TAAGGCTTTT 43907 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| ACCATGCTTC CTCTTTGGTC ATTCAACGGG AGGAGCGGTG GTCTTAAAG. .......... 747 GAAGTGAAGT TAGCTTCGAC CATTCTGAAA CCCTAAGTAT TTTCATTGAT TATTCTGCTC 43847 .......... .......... .......... .......... .......... .......... 747 CCTTGCACAG GCAGCTTCTT ATCCACATAT TGAAAACATG GTGGAGGGCA TCATATTGAC 43787 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| .......... GCAGCTTCTT ATCCACATAT TGAAAACATG GTGGAGGGCA TCATATTGAC 797 TTCACCAGCA TTGCGTGTGA AACCTGCAAA TCCTATTGTT AGTGTAAGGC GCCTAACCCT 43727 |||||||||| |||||||||| |||||||||| |||||||||| ||| TTCACCAGCA TTGCGTGTGA AACCTGCAAA TCCTATTGTT AGT....... .......... 840 TATATGGTTA TTTTCGTGTG CTTTGATGAA TGTGTTTTCA CAGCAGTGTC TTCTTTCATT 43667 .......... .......... .......... .......... .......... .......... 840 AACTTTGTGT TTGTTATCGA AATGCAGGCT GTGGCACCAA TTTTTTCATT GGTTGCACCT 43607 ||| |||||||||| |||||||||| |||||||||| .......... .......... .......GCT GTGGCACCAA TTTTTTCATT GGTTGCACCT 873 AGGTACCAGT TCAAAGGTTC TCACAAAAGG GGAATCCCTG TTTCAAGGGA TCCTGCCGCA 43547 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGTACCAGT TCAAAGGTTC TCACAAAAGG GGAATCCCTG TTTCAAGGGA TCCTGCCGCA 933 CTGGTGGCTA AGTATTCTGA CCCTCTAGTG TATACTGGGC CTTTGAGGGT GAGGACAGGG 43487 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGGTGGCTA AGTATTCTGA CCCTCTAGTG TATACTGGGC CTTTGAGGGT GAGGACAGGG 993 CATGAGATTC TGCGTATCTC GTCTTACTTG ATGCGGAACT TCAAGTCAGT CACTGTCCCA 43427 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGAGATTC TGCGTATCTC GTCTTACTTG ATGCGGAACT TCAAGTCAGT CACTGTCCCA 1053 TTCTTAGTCC TCCATGGATC TGCTGATAGA GTGACTGATC CATTGGCTTC TCAAGATTTG 43367 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTAGTCC TCCATGGATC TGCTGATAGA GTGACTGATC CATTGGCTTC TCAAGATTTG 1113 TACAATGAGG CTGCTTCTGA ATTCAAAGAC ATTAAACTTT ATGATGGATT CTTGCACGAT 43307 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACAATGAGG CTGCTTCTGA ATTCAAAGAC ATTAAACTTT ATGATGGATT CTTGCACGAT 1173 CTTCTATTTG AGCCTGAGCG TGAAGAAATT GCCCAGGATA TCATTGATTG GATGCACAAG 43247 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTCTATTTG AGCCTGAGCG TGAAGAAATT GCCCAGGATA TCATTGATTG GATGCACAAG 1233 AAGTTAGATT CTGGCAATCT TGCAAATGTG TATAGTCAGT GCTAGTTTTC TAAATCATTA 43187 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTTAGATT CTGGCAATCT TGCAAATGTG TATAGTCAGT GCTAGTTTTC TAAATCATTA 1293 GTGTTTTGAT TGATCAAA 43169 |||||||||| |||||||| GTGTTTTGAT TGATCAAA 1311 hqPGS_C08HBa0294K15.1-_SGN-U321315+ (46905 46425,45118 45080,44892 44822,44295 44231,44007 43918,43836 43744,43639 43169) ******************************************************************************** EST sequence 5 -strand 856 n (File: SGN-U342929-) 1 TTAAAACCCG CGGGCCCATT TATTTTTTAA ACCCCCCCCC CTTATAGGGG CAATTTGGGG 61 ACCCGGGCCC CCCCCCTGAG AATTTTTTTT TTTTTTTTTT TTCAATTAGA AAAGAATGAT 121 TCTGAATAAT TCATGATTCA CACAAAAAGT TTGTAAGCCA AAAAATATCT CTTTTTTGTA 181 TGAGATATTA TTTTTAGAAG GAATTGAAAA TATCACATAA TTTAATTGAA ATAGCGGAAG 241 AAGCAATCAA AACCTAGTTT CCCTGCTTAT TAATTAGAAC ACACAAAATC ACCTAGCTTA 301 GACGATTCTA GAGCTTTCTC AATATTTTCA GCCATGCCTT GGAGGGATGA GTTAATATAA 361 CCCGAAAATA ATTCCAAAGT CAACCCATCA ATCGGATCAG CAACGAACAA CCACTCGATC 421 TGGCACCCGC CCTCATCCAA TGACAACACT TTCAACGTAG ATACATAATA CTTGATCCCG 481 ATATTGTTAT CTAAGACCTC ATAGCTGATA CATCGCTCTA TCTTATCAAT CGTCAGCAAC 541 TTCTCGTGAC ACCACTTGAT GATCGCTTCC CCATCGCCTG ACGATAGGGG CGTGGTGCTA 601 GCGCAGTAGC GGATAATTTC ATCTTTATTA TCACTATCAA TTTGGTGACG AGTGTCAATG 661 TTTGGTAGCC ATGTGTGTGA GCTTGAGTAA ATCTTCAAGG AGTGGCCAGA CTTGTTCAGC 721 TGTGGCATGT TTTAGATTGA CTATAATGTC GCCTTCCCAT AGTGAATAGA GATGCTGGGG 781 CCTCTCTCTA TCTGTCCTCG TGCCGAATTC CTGCAGCCCG GGGGGATCCC CTGTTTCTAG 841 AACGACCGCC GAGCGA Predicted gene structure (within gDNA segment 45636 to 40543): Exon 1 45026 45012 ( 15 n); cDNA 86 100 ( 15 n); score: 1.000 Intron 1 45011 42884 (2128 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.81) Exon 2 42883 42211 ( 673 n); cDNA 101 778 ( 678 n); score: 0.940 MATCH C08HBa0294K15.1- SGN-U342929- 0.940 688 0.804 C PGS_C08HBa0294K15.1-_SGN-U342929- (45026 45012,42883 42211) Alignment (genomic DNA sequence = upper lines): TTTTTTTTTT TTTTTGAAGA ATAGGTGTTT TTGCTAATGC GAGTTGTTTA AGCCTTCTCA 44967 |||||||||| ||||| TTTTTTTTTT TTTTT..... .......... .......... .......... .......... 100 GTTCAGTATT GAGTACAGAA CAAATGTTGG CTTAACTAGT TGGATGACGA TATTCCTTTT 44907 .......... .......... .......... .......... .......... .......... 100 ATATTTCATT TCAGTGGACG ATATGCTCAT TTTGCTAGGC AACTGAACTC CTGCAACTTT 44847 .......... .......... .......... .......... .......... .......... 100 GGGGTGTATG CAATGGACTG GATAGGTACT TTTATCCTTC ATTTTGAAGA CCTTGTTTAA 44787 .......... .......... .......... .......... .......... .......... 100 ATTGGTTAGA GGTCCTGTAG TGACCACTTT ATGATCGCAC ATTCTAGTAT TTCACTCTAA 44727 .......... .......... .......... .......... .......... .......... 100 TCATGTGAAA GGGTAACACA GTCATTCTTA GGATGCTAAA ACAAACTTGC CTTATCGTTA 44667 .......... .......... .......... .......... .......... .......... 100 GAATGGCTAC CAAAAGGTCA ATTATGGAAG AGTGTGTGTA TAACTTCATC ATTTTCTTTC 44607 .......... .......... .......... .......... .......... .......... 100 TCATTGTGTC TGTTCAATCG TGGTCCTTTC TTTATATTCT TTTCCATGGA TGAAGTTGGT 44547 .......... .......... .......... .......... .......... .......... 100 CCTTTTTTCC CTGATGTTTC TTTACTAGAT AGCCTCTTAT CAGGATTATA CTTCTCTCAC 44487 .......... .......... .......... .......... .......... .......... 100 AGATACCTCA CAAAGTTTGT TCTTCTTCTA AAATGTGTTG ATTTTGGGCT ACATGCATTA 44427 .......... .......... .......... .......... .......... .......... 100 AGTATGTCTT CCTCTGATTC ATGGATAATT AAATAAGCTT CTCTGAGCTG ATTGTTATGA 44367 .......... .......... .......... .......... .......... .......... 100 TTGATTATGC TAGTAGTCAA AGTGGATGGT TGATACTTCT TAACAAATGA CAGAGTTATT 44307 .......... .......... .......... .......... .......... .......... 100 CTGTGTGACA GGTCATGGAG GGAGTGATGG ATTACATGGA TACGTGCCAT CTTTGGACCA 44247 .......... .......... .......... .......... .......... .......... 100 TGTTGTGGCA GACACAGTAA GTTGTCACTG TTTTTATTTT TCATGCTCCA TCTCTGCCAT 44187 .......... .......... .......... .......... .......... .......... 100 ATATGAACTC TTTTCCTTGA GGATTCTATT CCTATTATTT TCTTGAACTG GATAGCCACT 44127 .......... .......... .......... .......... .......... .......... 100 CCTAAGTAAC AAGCTGAAAC TGTGATCTTC ATTCTACATT CATCTTTCTT TCATTGTTTT 44067 .......... .......... .......... .......... .......... .......... 100 CTTGCCTCAT CCATAGAGCC TGCCAATTTA CCCACTATAT TCTTTTCATG TTTATACAGG 44007 .......... .......... .......... .......... .......... .......... 100 GGGCTTTCTT GGAAAAGGTC AAGTTTGACA ACCCTGGTAT ACCATGCTTC CTCTTTGGTC 43947 .......... .......... .......... .......... .......... .......... 100 ATTCAACGGG AGGAGCGGTG GTCTTAAAGG TAAGGCTTTT GAAGTGAAGT TAGCTTCGAC 43887 .......... .......... .......... .......... .......... .......... 100 CATTCTGAAA CCCTAAGTAT TTTCATTGAT TATTCTGCTC CCTTGCACAG GCAGCTTCTT 43827 .......... .......... .......... .......... .......... .......... 100 ATCCACATAT TGAAAACATG GTGGAGGGCA TCATATTGAC TTCACCAGCA TTGCGTGTGA 43767 .......... .......... .......... .......... .......... .......... 100 AACCTGCAAA TCCTATTGTT AGTGTAAGGC GCCTAACCCT TATATGGTTA TTTTCGTGTG 43707 .......... .......... .......... .......... .......... .......... 100 CTTTGATGAA TGTGTTTTCA CAGCAGTGTC TTCTTTCATT AACTTTGTGT TTGTTATCGA 43647 .......... .......... .......... .......... .......... .......... 100 AATGCAGGCT GTGGCACCAA TTTTTTCATT GGTTGCACCT AGGTACCAGT TCAAAGGTTC 43587 .......... .......... .......... .......... .......... .......... 100 TCACAAAAGG GGAATCCCTG TTTCAAGGGA TCCTGCCGCA CTGGTGGCTA AGTATTCTGA 43527 .......... .......... .......... .......... .......... .......... 100 CCCTCTAGTG TATACTGGGC CTTTGAGGGT GAGGACAGGG CATGAGATTC TGCGTATCTC 43467 .......... .......... .......... .......... .......... .......... 100 GTCTTACTTG ATGCGGAACT TCAAGTCAGT CACTGTCCCA TTCTTAGTCC TCCATGGATC 43407 .......... .......... .......... .......... .......... .......... 100 TGCTGATAGA GTGACTGATC CATTGGCTTC TCAAGATTTG TACAATGAGG CTGCTTCTGA 43347 .......... .......... .......... .......... .......... .......... 100 ATTCAAAGAC ATTAAACTTT ATGATGGATT CTTGCACGAT CTTCTATTTG AGCCTGAGCG 43287 .......... .......... .......... .......... .......... .......... 100 TGAAGAAATT GCCCAGGATA TCATTGATTG GATGCACAAG AAGTTAGATT CTGGCAATCT 43227 .......... .......... .......... .......... .......... .......... 100 TGCAAATGTG TATAGTCAGT GCTAGTTTTC TAAATCATTA GTGTTTTGAT TGATCAAAGG 43167 .......... .......... .......... .......... .......... .......... 100 GGATGCTGTT CTATTTATTT ATTTCATCAG TTATCCTACT TTGCTTCTCT TCTCCAATGG 43107 .......... .......... .......... .......... .......... .......... 100 AATTACAAAG ATGATTCCCA CTATCCAAGC TTGTATAGTG TGTGTAGTAG TAAAATTAGT 43047 .......... .......... .......... .......... .......... .......... 100 GTTGCTGATC TTTAGACTAT GTATTCTATG AACACAACAC AATCTTCTCT ATGTTGGGTA 42987 .......... .......... .......... .......... .......... .......... 100 AAAGATTATC TTGCTCATTC AATTATTCGA CCAGTTAAAC GTGACACATA TAAGAAATGT 42927 .......... .......... .......... .......... .......... .......... 100 AAACTTAGAT CTTGAGAAAC ATTAAAAACA ACCCACTCAA TAGTTCAACT AG-AAAGAAT 42868 ||||| | || ||||||| .......... .......... .......... .......... ...TTCAATT AGAAAAGAAT 117 CGATCTGAAT TAGTCATGAT TCATACAAAA AGTT-GTAAG CC-AAAAATA TCTC-TTTTT 42811 ||||||| | ||||||| ||| |||||| |||| ||||| || ||||||| |||| ||||| GATTCTGAAT AATTCATGAT TCACACAAAA AGTTTGTAAG CCAAAAAATA TCTCTTTTTT 177 GTATGAGATA TTATTTTTAG AAGGAATTGA AAATATCACA TAAATTAATT GAAATAGCGG 42751 |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| GTATGAGATA TTATTTTTAG AAGGAATTGA AAATATCACA TAATTTAATT GAAATAGCGG 237 AAGAAGCAAT CAAAAACTAG TTTCCCTGCT TATTAATTAG AACACACAAA ATCACCTAGC 42691 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| AAGAAGCAAT CAAAACCTAG TTTCCCTGCT TATTAATTAG AACACACAAA ATCACCTAGC 297 TTAGACGATT CTAGAGCTTT CTCAATATTT TCAGCCATGC CTTGGAGGGA TGAGTTAATA 42631 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAGACGATT CTAGAGCTTT CTCAATATTT TCAGCCATGC CTTGGAGGGA TGAGTTAATA 357 TAACCCGAAA ATAATTCCAA AGTCAACCCA TCAATCGGAT CAGCAACGAA CAACCACTCG 42571 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAACCCGAAA ATAATTCCAA AGTCAACCCA TCAATCGGAT CAGCAACGAA CAACCACTCG 417 ATCTGGCACC CGCCCTCATC CAATGACAAC ACTTTCAACG TAGATACATA ATACTTGATC 42511 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCTGGCACC CGCCCTCATC CAATGACAAC ACTTTCAACG TAGATACATA ATACTTGATC 477 CCGATATTGT TATCTAAGAC CTCATAGCTG ATACATCGCT CTATCTTATC AATCGTCAGC 42451 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGATATTGT TATCTAAGAC CTCATAGCTG ATACATCGCT CTATCTTATC AATCGTCAGC 537 AACTTCTCGT GACACCACTT GATGATCGCT TCCCCATCGC CTGACGATAG GGGCGTGGTG 42391 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACTTCTCGT GACACCACTT GATGATCGCT TCCCCATCGC CTGACGATAG GGGCGTGGTG 597 CTAGCGCAGT AGCGGATAAT TTCATCTTTA TTATCACTAT CAATTTGGTG ACAAGTGTCA 42331 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| CTAGCGCAGT AGCGGATAAT TTCATCTTTA TTATCACTAT CAATTTGGTG ACGAGTGTCA 657 ATGTTTGGTA GCCATTTGTG -GAAGTTGAA GAAATCTTCA AGGAGTGGCC ATACTTGTTC 42272 |||||||||| ||||| |||| || |||| ||||||||| |||||||||| | |||||||| ATGTTTGGTA GCCATGTGTG TGAGCTTGAG TAAATCTTCA AGGAGTGGCC AGACTTGTTC 717 AGCTTTGGCA TGTTTTAGAT TGACTATAAA TTTGCCTTCC CATTTGGACT CAAGTTGTTG 42212 |||| ||||| |||||||||| ||||||||| | ||||||| ||| || | || || || AGCTGTGGCA TGTTTTAGAT TGACTATAAT GTCGCCTTCC CATAGTGAAT AGAGATGCTG 777 G 42211 | G 778 hqPGS_C08HBa0294K15.1-_SGN-U342929- (42883 42211) ******************************************************************************** EST sequence 56 +strand 1035 n (File: SGN-U339541+) 1 TAGAACCATC GAGATCCACC TCGGTGGCTT CCGCTCTAGA ACTCGTGGAT CCCCCGGGCT 61 GCAGGTCTTG ATGAGAATTT GTCTTATGAG GAGGAGCCTG TTGCCATTTT AGATAGAGAA 121 GTCCGCAAAT TGAGGTCAAG GGAGATTGCA TCTATCAAAG TTCAATGGAA GAATCGACCA 181 GTTGAAGAAT CCACTTGGGA GAAGGAAGTT GATATGCGAG AAAGATACCC ATACCTGTTT 241 ACAGATTCAG GTACTCCTTT TCGCCCTTGT TTTTCTTCTT GTGATCGTTC GGGGACGAAC 301 GATGGGTAAA TTGGTATCTA TTGTAACGAC CTGTTTAGTC GTTTTGAGTA ACAGATTTTA 361 TTTCTGGAAA AACTGACTGA GACGACGGAT CCCACGACGG ACCGTCGAGG GGGTCTCGTT 421 CCAAAACACT TAGAATTCTG AAATTTGGGT ACTGAAATCG ACTCTCTGAA CTTCGTGACG 481 GAATGGCAGG ACGGACCGTC ACAGGCGTGA TGGGCCGTCA CAGACCCTTG GTAAAAATCT 541 AGTCTCTGAA CTCTGTGACG GACGTGCAGG ACGGACCGTC ACAGACTGCG TAATCCCAGG 601 CTGGGTCGGA TTTCTGTTAA ATGTTTTAAG GGGCGTTTTG GACTATTCTT GCTTATAATT 661 ATAAAAGTTG TGGTTGAATA TAAATAATCC AATTTCTTGA GGGTTAAAGG AGATAACCTT 721 AAATTAATTA GTGGGTTATT TTGGCATCCT TTATACTTAA ATATATGGTA ATTAGGGTAA 781 AAAGAAAGAG GGGTTTGGAT TAAGAAAAAT TGTAAGCACC CAGGAGAAGG GAAAGAAAAA 841 CAATCCGAGA GAAAGAGGGG ATACCCAAGG AGGAAACAAA GCTTTGGGAA AATGGCTTGC 901 TTGAACACCA AATTCTTGGG GGAAGCAAAC GTGCCCGGTT TTTTCACCTA ACCCGCAACT 961 CTTAGCCAGT CTTTTATTTC ACCCCAATTT CAGGGTGGGC TAATGCTTTT TAGCCTGGGA 1021 CTGGATTTTC CTTTC Predicted gene structure (within gDNA segment 51435 to 60556): Exon 1 55852 55921 ( 70 n); cDNA 322 392 ( 71 n); score: 0.786 Intron 1 55922 55954 ( 33 n); Pd: 0.000 (s: 0.74), Pa: 0.000 (s: 0.91) Exon 2 55955 56418 ( 464 n); cDNA 393 836 ( 444 n); score: 0.801 Intron 2 56419 57312 ( 894 n); Pd: 0.000 (s: 0.70), Pa: 0.986 (s: 0) Exon 3 57313 57322 ( 10 n); cDNA 837 846 ( 10 n); score: 0.600 Intron 3 57323 57671 ( 349 n); Pd: 0.000 (s: 0), Pa: 0.975 (s: 0) Exon 4 57672 57685 ( 14 n); cDNA 847 860 ( 14 n); score: 0.786 MATCH C08HBa0294K15.1+ SGN-U339541+ 0.799 558 0.539 C PGS_C08HBa0294K15.1+_SGN-U339541+ (55852 55921,55955 56418,57313 57322,57672 57685) Alignment (genomic DNA sequence = upper lines): TGTAACGACC TG-TTAGTCG TTTTGAGCAG TAGAGTTTA- TTCTGGTAAT AGCTGTCTGG 55909 |||||||||| || ||||||| ||||||| | ||| |||| |||||| || | ||| ||| TGTAACGACC TGTTTAGTCG TTTTGAGTAA CAGATTTTAT TTCTGG-AAA AACTGACTGA 380 GTCGACGGAT CCCGGACCGT CGTGGGCACG ACGGACCGTC GTGGGCACGA CGGACCGTCG 55969 | |||||||| || ||||| |||||||||| GACGACGGAT CC........ .......... .......... .....CACGA CGGACCGTCG 407 AGGGGGTCTC GTTCCAAAAC ACTTAG-ATT CTAAAAATTT GGGTAATGAG AACAACTCTC 56028 |||||||||| |||||||||| |||||| ||| || |||||| ||||| ||| | | |||||| AGGGGGTCTC GTTCCAAAAC ACTTAGAATT CT-GAAATTT GGGTACTGAA ATCGACTCTC 466 TGAACTTCGC GACGACATGG CAGGACGGAC CGTCGTGGGC ACGACGGACC GTCACAGACC 56088 ||||||||| |||| |||| |||||||||| |||| ||| || || || |||||||||| TGAACTTCGT GACGGAATGG CAGGACGGAC CGTCACAGGC GTGATGGGCC GTCACAGACC 526 CTTTAATGAA ATTCAGTCTC TGAACTTTGT GACGGAAGCA GCAGGACGGA CCGTCATAGG 56148 ||| || || |||||| |||||| ||| |||||| | |||||||||| ||||| | CTTGGTAAAA ATCTAGTCTC TGAACTCTGT GACGGACG-T GCAGGACGGA CCGTC--A-- 581 CACGACGGGC CGTCACAGGC TGCGTAACCT TGACTGGGTC AGATTTCTGT TAAATGTTTT 56208 || ||| | ||| | | | | || | ||||||| ||||||||| |||||||||| CA-GAC-TG- CGT-A-A--- T-C----CC- AGGCTGGGTC GGATTTCTGT TAAATGTTTT 627 AAGGGGCGTT TTGGACTATT TCTGCTTATA ATTATAAAGT TAGTGGGTTA ATGTTAATAA 56268 |||||||||| |||||||||| |||||||| |||||||| | |||| | | || | ||||| AAGGGGCGTT TTGGACTATT CTTGCTTATA ATTATAAAAG TTGTGGTTGA ATATAAATAA 687 TTCAATTACT TGGGGGTTAA AGGTGATAAC CTTGAAATAA ATAGTGGGTT ACTTTTACCA 56328 | ||||| || || ||||||| ||| |||||| ||| || ||| ||||||||| | |||| || TCCAATTTCT TGAGGGTTAA AGGAGATAAC CTTAAATTAA TTAGTGGGTT A-TTTTGGCA 746 TCTTTTATAC TTAATTATAT GGTAATTAGG GT-AAAAGAA A-AAGAGTTT GAATAAGGAA 56386 || ||||||| |||| ||||| |||||||||| || ||||||| | | | |||| | || | ||| TCCTTTATAC TTAAATATAT GGTAATTAGG GTAAAAAGAA AGAGGGGTTT GGATTAAGAA 806 AAATAGAAAG AACAAAAGAG AGGGACGAAC GAGCGAGAGA AGAGAGAATG AAGAGGAAAG 56446 |||| | ||| || | ||| | || ||| || AAATTGTAAG CACCCAGGAG AAGG--GAAA GA........ .......... .......... 836 CAAAGACCTT GAGGAGTAGC TTGCGTGATC ACGAATTCTT CGGTGGAGGT AGGTTATGGT 56506 .......... .......... .......... .......... .......... .......... 836 TTATGCTATT TCATAGTAAA CTCTTAATAG CGAATGATAT GTATTGGGTA GTATTGTAAA 56566 .......... .......... .......... .......... .......... .......... 836 GTCTTACATA TGCTTAATTG TATGCTTGCA TGATGTGATT ATGTAATTGT AATGGGTTGG 56626 .......... .......... .......... .......... .......... .......... 836 AAAGATGAGG TTGTGAAGCT TAAACCTAAA ACCCTCTGTG TTAATGATGA TGCCTTGGTA 56686 .......... .......... .......... .......... .......... .......... 836 TAAAAGAAGG CTTGATGAAC TAAAAGAATG AGGTTAGTGG ATCAGGTGTC ACGTTCCGAC 56746 .......... .......... .......... .......... .......... .......... 836 ACCAGGATAG TAGTAGTGAA TCGGGTGTCA CGTTCCGACA CCAGGATAGT AATTGTGGAT 56806 .......... .......... .......... .......... .......... .......... 836 CGGGTGTCAC GTTCCGACAC CAGGATAGTA ATAGTGGATC GGGTATCACG TCCCGACACC 56866 .......... .......... .......... .......... .......... .......... 836 AGGATAGTAG TAATGGATCG GGTGTCACGT TCCGACACCA GGATAGTAGT AATGGATCGG 56926 .......... .......... .......... .......... .......... .......... 836 GTGTCACGTT CCGACACCAG GATAGTAGTA GTGGATCGGG TGTCACGTTC CGACATCAGG 56986 .......... .......... .......... .......... .......... .......... 836 ATAGTAGTAA AGGATCGGAG TGTCACGTTC CGACACCAGG ATAGTAAAAG AATGAATCTT 57046 .......... .......... .......... .......... .......... .......... 836 GAATCATGTT TATATACTCA GGTTTAAAGA AACTATTTTC CAAACGAGTA TGGTGTGGAG 57106 .......... .......... .......... .......... .......... .......... 836 GAGTGAGTCC TCATAGATGC GCTTGGGTTG TGGCCAATGG TTATGGTACT TGTTGTTGTT 57166 .......... .......... .......... .......... .......... .......... 836 GTCTGTTGAG TATTGTAGTT GATTTTATGT TATTATATGA TATATGTTGT TTTCTATTTT 57226 .......... .......... .......... .......... .......... .......... 836 GAGTTGGCCG ATGATACCTA CTCAGTACTT GTGCCTTGTA CTGACCCCTA CTTGTATGTT 57286 .......... .......... .......... .......... .......... .......... 836 TCTTTCTTGT TATTTGTGGA GTGCAGCAAA CGTGCCATCG ACTTTGACTC AACCGCAACT 57346 ||| | || .......... .......... ......AAAA CAATCC.... .......... .......... 846 CTAGCCAGAC TTCAGCATAA TCAGATTTCA GGGTGAGATA TTGTTCCTAG CTCGGACTGG 57406 .......... .......... .......... .......... .......... .......... 846 ATTCTTTCCT TCGCGTCTTG ATGTCTTGAA GTTCGGACAT GGACTATCTC TTTTACTTAT 57466 .......... .......... .......... .......... .......... .......... 846 TTTAGCTTCT TAGATACTCT TAGATTTAGT AATTTGAGGA TAGATGTTCT TGTGATGATG 57526 .......... .......... .......... .......... .......... .......... 846 ACTTCCAGAT TTTGGGGATA ATGATAAGTT TTGAGTTTTA GAAGTTAATT ATTGATTTCG 57586 .......... .......... .......... .......... .......... .......... 846 TTAATGAGTT TTAATTCTTC CGCATTATAT TCTATTTATT ATCGTTGAAT TGTTGGGGTT 57646 .......... .......... .......... .......... .......... .......... 846 TAGATTGGTT GGTTCTCTCA CATAGGAGGG TAAGAGTGG 57685 ||| | ||||| || .......... .......... .....GAGAG AAAGAGGGG 860 hqPGS_C08HBa0294K15.1+_SGN-U339541+ (55852 55921,55955 56418) ******************************************************************************** EST sequence 68 -strand 969 n (File: SGN-U335080-) 1 GTGGAGGTAG GTAATGGTTT AAGTATTTCC ATAGTAACTT TTAATAGCAA TTGATATGTA 61 TTGGGTAGTA TTGTAAAGTC TTTTATATGC TTAATTGTAT GCTTGCATGA TGTGATTATG 121 AAATTGTAAT GGGTTGGAAA GATAAGGTTG TGAAGCTTAA AACCTAAAAC CCTCTTTGTT 181 AATGATGATG TCTTGGTATA AAAGAAGGCT TGATGAACTA AAAGAATGAG GTTAGGGGAT 241 CGGGTGTCAC GAACCGACAC GTAGTATTAA TGGATCGGGT GTCACGAACC GACACATAGT 301 ATTAATGGAT CGGGTGTCAC GAATCGGCAC GTAGTATTAG GAGATCGGGT GTAACGAACC 361 GACACGTAGT ATTAGGGGAT CGGGTGTCAC GAACCGACAC GTAGCATTAG GGGATCGGAG 421 TATCACGTTC CGACACCACG ATAGTAAAAA GAATGAATCT TGAATTATGT TAATGTACTC 481 AATTTAATGA ACCTGTTTCC CAAATGAGTA TGGTGTGGAG GCTTGAGTCC TCATAGATGT 541 TCTTGGGTTG TGCCCAATGG TTATGGTACT TGTTGTTGTC ACCTGTTAAG TGTTATGGTT 601 GATTTTATTT TATTATTTGA TATATATTGT TCTCTATTCT GAGTTGGCCG ATGATATCTA 661 CTCAGTACTC GTGTTTGTAC TGACCCCTAC TTTTATGTTT TCTTTTTGTT AATTGTGGAG 721 TGCAGCAAAC GTACCGTCGT CTTCAACTCA ACCGCAACTC TAACCAGTCT TCATCACGTC 781 AGATTTCAGG GTGAGCTATT GTTCCTAGCT CGGACTGGAT TCTCTCTCAT TCATGTCTTG 841 ATGTCCTTGA AGATCAGACA TGCTGGTGCC GAATTCCTGC AGCCCGGGGG ATCCACTAGT 901 TCTAGAGCGG CAGCCACCGC GGTGANGCCG ATCGCATTGC ATTTCATTNN NNNNNNNGNA 961 NACTCTCGT Predicted gene structure (within gDNA segment 55421 to 59471): Exon 1 56489 56787 ( 299 n); cDNA 1 295 ( 295 n); score: 0.895 Intron 1 56788 56869 ( 82 n); Pd: 0.000 (s: 0.78), Pa: 0.000 (s: 0.76) Exon 2 56870 57436 ( 567 n); cDNA 296 851 ( 556 n); score: 0.832 MATCH C08HBa0294K15.1+ SGN-U335080- 0.854 866 0.894 C PGS_C08HBa0294K15.1+_SGN-U335080- (56489 56787,56870 57436) Alignment (genomic DNA sequence = upper lines): GTGGAGGTAG GTTATGGTTT ATGCTATTTC ATAGTAAACT CTTAATAGCG AATGATATGT 56548 |||||||||| || ||||||| | | || | ||||| |||| |||||||| | |||||||| GTGGAGGTAG GTAATGGTTT AAGTATTTCC ATAGT-AACT TTTAATAGCA ATTGATATGT 59 ATTGGGTAGT ATTGTAAAGT CTTACATATG CTTAATTGTA TGCTTGCATG ATGTGATTAT 56608 |||||||||| |||||||||| ||| ||||| |||||||||| |||||||||| |||||||||| ATTGGGTAGT ATTGTAAAGT CTTTTATATG CTTAATTGTA TGCTTGCATG ATGTGATTAT 119 GTAATTGTAA TGGGTTGGAA AGATGAGGTT GTGAAGCTT- AAACCTAAAA CCCTCTGTGT 56667 | |||||||| |||||||||| |||| ||||| ||||||||| |||||||||| |||||| ||| GAAATTGTAA TGGGTTGGAA AGATAAGGTT GTGAAGCTTA AAACCTAAAA CCCTCTTTGT 179 TAATGATGAT GCCTTGGTAT AAAAGAAGGC TTGATGAACT AAAAGAATGA GGTTAGTGGA 56727 |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| |||||| ||| TAATGATGAT GTCTTGGTAT AAAAGAAGGC TTGATGAACT AAAAGAATGA GGTTAGGGGA 239 TCAGGTGTCA CGTTCCGACA CCAGGATAGT AGTAGTGAAT CGGGTGTCAC GTTCCGACAC 56787 || ||||||| || |||||| | | |||| | || || || |||||||||| | ||||||| TCGGGTGTCA CGAACCGACA -C--G-TAGT ATTAATGGAT CGGGTGTCAC GAACCGACAC 295 CAGGATAGTA ATTGTGGATC GGGTGTCACG TTCCGACACC AGGATAGTAA TAGTGGATCG 56847 .......... .......... .......... .......... .......... .......... 295 GGTATCACGT CCCGACACCA GGATAGTAGT AATGGATCGG GTGTCACGTT CCGACACCAG 56907 |||||| | |||||||||| |||||||| || || | .......... .......... ..ATAGTATT AATGGATCGG GTGTCACGAA TCGGCA-C-- 330 GATAGTAGTA ATGGATCGGG TGTCACGTTC CGACACCAGG ATAGTAGTAG TGGATCGGGT 56967 | ||||| || ||||||| ||| ||| | ||||| | | ||||| ||| ||||||||| G-TAGTATTA GGAGATCGGG TGTAACGAAC CGACA-C--G -TAGTATTAG GGGATCGGGT 385 GTCACGTTCC GACATCAGGA TAGTAGTAAA GGATCGGAGT GTCACGTTCC GACACCAGGA 57027 |||||| || |||| | | ||| | || |||||||||| ||||||||| ||||||| || GTCACGAACC GACA-C--G- TAGCATTAGG GGATCGGAGT ATCACGTTCC GACACCACGA 441 TAGT-AAAAG AATGAATCTT GAATCATGTT TATATACTCA GGTTTAAAGA AACTATTTTC 57086 |||| ||||| |||||||||| |||| ||||| || |||||| ||||| || | || ||| | TAGTAAAAAG AATGAATCTT GAATTATGTT AATGTACTCA -ATTTAATGA ACCTGTTTCC 500 CAAACGAGTA TGGTGTGGAG GAGTGAGTCC TCATAGATGC GCTTGGGTTG TGGCCAATGG 57146 |||| ||||| |||||||||| | ||||||| ||||||||| ||||||||| || ||||||| CAAATGAGTA TGGTGTGGAG GCTTGAGTCC TCATAGATGT TCTTGGGTTG TGCCCAATGG 560 TTATGGTACT TGTTGTTGTT GTCTGTTGAG TATTGTAGTT GATTTTATGT TATTATATGA 57206 |||||||||| ||||||||| ||||| || | || | ||| |||||||| | |||||| ||| TTATGGTACT TGTTGTTGTC ACCTGTTAAG TGTTATGGTT GATTTTATTT TATTATTTGA 620 TATATGTTGT TTTCTATTTT GAGTTGGCCG ATGATACCTA CTCAGTACTT GTGCCTTGTA 57266 ||||| |||| | |||||| | |||||||||| |||||| ||| ||||||||| ||| ||||| TATATATTGT TCTCTATTCT GAGTTGGCCG ATGATATCTA CTCAGTACTC GTG-TTTGTA 679 CTGACCCCTA CTTGTATGTT TCTTTCTTGT TATTTGTGGA GTGCAGCAAA CGTGCCATCG 57326 |||||||||| ||| |||||| | || |||| || ||||||| |||||||||| ||| || ||| CTGACCCCTA CTTTTATGTT TTCTTTTTGT TAATTGTGGA GTGCAGCAAA CGTACCGTCG 739 ACTTTGACTC AACCGCAACT CTAGCCAGAC TTCAGCATAA TCAGATTTCA GGGTGAGATA 57386 ||| |||| |||||||||| ||| |||| | |||| || |||||||||| ||||||| || TCTTCAACTC AACCGCAACT CTAACCAGTC TTCATCA-CG TCAGATTTCA GGGTGAGCTA 798 TTGTTCCTAG CTCGGACTGG ATTCT-T-TC CTTCGCGTCT TGATGT-CTT GAA 57436 |||||||||| |||||||||| ||||| | || ||| |||| |||||| ||| ||| TTGTTCCTAG CTCGGACTGG ATTCTCTCTC ATTCATGTCT TGATGTCCTT GAA 851 hqPGS_C08HBa0294K15.1+_SGN-U335080- (56489 56787,56870 57436) ******************************************************************************** EST sequence 22 +strand 809 n (File: SGN-U335078+) 1 NTTGAAAACA AAAGCTGGAG CTCCACCGCG GTGGCGGCCG CTCTAGAACT AGTGGATCCC 61 CCGGGCTGCA GGAATTCGGC ACCAGCCCTA ATCTACTTTG TTAATAATGA TGCCTTGGTA 121 TAAAAGAAGG CTTGATGAAC GAAAGTGGTG AGATTAGGGG ATCGGGTGCC ACGTTCCGGT 181 ACCAGGATAG AATATGGATC GGGTGTCACG TTCCGACACC AGGATAGAAT ATGGATCGGG 241 TGCCACGTTC CGGTACCAGG ATAGAATATG GATCGGGTGT CACGTTCCGA CACCAGGATA 301 GAATATGGAT CGGGTGTCAC GTTCTGACAC CAGGATAGAA TATGGATCGG GTGCCACGTT 361 CCGGTGCCAG GATAGTATAT TGAGGAGTGG AGTGTCACGT AAGGACACGA GGGGAATAAA 421 TATGATGAAT CTTGAAATAT GTTAATATAT GCAATCCAAT GAACTAAATT CCCAAATAAG 481 TATGATGAGG AGGTGTGAGT CCTCATTGAT GTGCTTGGTG ATGCAACCAA GGGTTATGGT 541 AATTGCAAAT GCTGCATGCT AAGGATATTA GTTAATTTTA TGATATTGCT TAATACATAC 601 TGGTATCTAT TTTGAGTTGG CCGACGATGT CTACTCAATA CCCGTGTTTT GTACTGACCC 661 CTACTTTTAT TGTTACTTCC TGGGTATTTG GGGAGAGCAG CAAACGTGCC GTCACCTTAT 721 ACTTCACCGT AACTCAAGGC TGGCTTTACT ACAATGGAAA ATTCAGGGGG GGCTGATGTT 781 TCCTACTGGG ACTTGGACAT TTTTTTTTG Predicted gene structure (within gDNA segment 55013 to 62255): Exon 1 56662 56953 ( 292 n); cDNA 96 377 ( 282 n); score: 0.870 Intron 1 56954 56990 ( 37 n); Pd: 0.000 (s: 0.86), Pa: 0.000 (s: 0.66) Exon 2 56991 57417 ( 427 n); cDNA 378 807 ( 430 n); score: 0.704 MATCH C08HBa0294K15.1+ SGN-U335078+ 0.771 719 0.889 C PGS_C08HBa0294K15.1+_SGN-U335078+ (56662 56953,56991 57417) Alignment (genomic DNA sequence = upper lines): CTGTGTTAAT GATGATGCCT TGGTATAAAA GAAGGCTTGA TGAACTAAAA GAATGAGGTT 56721 || ||||||| ||||||||| |||||||||| |||||||||| ||||| ||| |||| || CTTTGTTAAT AATGATGCCT TGGTATAAAA GAAGGCTTGA TGAACGAAAG TGGTGAGATT 155 AGTGGATCAG GTGTCACGTT CCGACACCAG GATAGTAGTA GTGAATCGGG TGTCACGTTC 56781 || ||||| | ||| |||||| ||| ||||| ||||| | || || |||||| |||||||||| AGGGGATCGG GTGCCACGTT CCGGTACCAG GATAG-AATA -TGGATCGGG TGTCACGTTC 213 CGACACCAGG ATAGTAATTG TGGATCGGGT GTCACGTTCC GACACCAGGA TAGTAATAGT 56841 |||||||||| |||| || | |||||||||| | |||||||| | ||||||| ||| |||| | CGACACCAGG ATAG-AA-TA TGGATCGGGT GCCACGTTCC GGTACCAGGA TAG-AATA-T 269 GGATCGGGTA TCACGTCCCG ACACCAGGAT AGTAGTAATG GATCGGGTGT CACGTTCCGA 56901 ||||||||| |||||| ||| |||||||||| || | | ||| |||||||||| ||||||| || GGATCGGGTG TCACGTTCCG ACACCAGGAT AG-AAT-ATG GATCGGGTGT CACGTTCTGA 327 CACCAGGATA GTAGTAATGG ATCGGGTGTC ACGTTCCGAC ACCAGGATAG TAGTAGTGGA 56961 |||||||||| | | | |||| |||||||| | |||||||| ||||||||| || CACCAGGATA G-AAT-ATGG ATCGGGTGCC ACGTTCCGGT GCCAGGATAG TA........ 377 TCGGGTGTCA CGTTCCGACA TCAGGATAGT AGTAAAGGAT CGGAGTGTCA CGTTCCGACA 57021 | | | |||| ||||||||| ||| |||| .......... .......... .........T A-TTGAGGAG TGGAGTGTCA CGTAAGGACA 407 CCAGGATAGT AAA-AGAATG AATCTTGAAT CATGTTTATA TACTCAGGTT TAAAGAAACT 57080 | ||| | | ||| | ||| ||||||||| ||||| ||| || || | || ||| CGAGGGGAAT AAATATGATG AATCTTGAAA TATGTTAATA TATGCA-ATC CAATGAACTA 466 ATTTTCCAAA CGAGTATGGT GTGGAGGAGT GAGTCCTCAT AGATGCGCTT GG-GTTGTGG 57139 | || ||||| |||||| | | ||||| || |||||||||| |||| |||| || | || AATTCCCAAA TAAGTATGAT GAGGAGGTGT GAGTCCTCAT TGATGTGCTT GGTGATGCAA 526 CCAATGGTTA TGGTACTTGT TGTTGTTGTC TGTTGAGTAT TGTAGTTGAT TTTATGTTAT 57199 |||| ||||| ||||| ||| || || || | || || ||||| || |||||| ||| CCAAGGGTTA TGGTAATTGC AAATGCTGCA TGCTAAGGAT ATTAGTTAAT TTTATGATAT 586 TATATGATAT ATGTTGTTTT CTATTTTGAG TTGGCCGATG ATACCTACTC AGTACTTGTG 57259 | | ||| || || | | |||||||||| |||||||| | || |||||| | ||| ||| TGCTTAATAC ATACTGGTAT CTATTTTGAG TTGGCCGACG ATGTCTACTC AATACCCGTG 646 CCTTGTACTG ACCCCTACTT GTA-TGTTTC TTTCTTGTTA TTTGTGGAGT GCAGCAAACG 57318 |||||||| |||||||||| || |||| | || || | || |||| |||| |||||||||| TTTTGTACTG ACCCCTACTT TTATTGTTAC TTCCTGGGTA TTTGGGGAGA GCAGCAAACG 706 TGCCATCGAC TTTGACTCAA CCGCAACTCT AGCCAGACTT CAGCATAAT- CAGATTTCAG 57377 |||| || | || ||| | ||| ||||| || | | ||| | | ||| | | ||||| TGCCGTCACC TTATACTTCA CCGTAACTCA AGGCTGGCTT TACTACAATG GAAAATTCAG 766 GGTGAGATAT TGTTCCTAGC TCGGAC-TGG ATTCTTTCCT T 57417 || | | | |||| | | | |||| ||| | ||| | | GGGGGGCTGA TGTTTCCTAC TGGGACTTGG ACATTTTTTT T 807 hqPGS_C08HBa0294K15.1+_SGN-U335078+ (56662 56953,56991 57417) ******************************************************************************** EST sequence 33 -strand 1660 n (File: SGN-U315285-) 1 CCACAGCCCC AGTGGCTGGC TCAGTCGCAC CCTGTCCCGC CGGTGCTGGT GTTGATGCTG 61 GCGTAGTCGT TGCTCTAGTT CTAACCATCT GCGAAATAGA GTGAAGATGG TCAGATACCA 121 ATTTGTATCA CCTAGATACC AATTGGACCC AAGTAATAGC ACGAAAGAAG AAAGAATGGA 181 ATTTTCCAAA AGTCTTATAG CCTCTCAAGG AAAAGTAAAG GCATCCCCCT ACCGTTCCTT 241 AAGACTCTAC TAGACTCGTT CTTGTGTGAT GAGACCAACG AACCTAATGC TCTGATACCA 301 AGTTTGTCAC GACCAAAACC GGGTTGCGAC TGGCACCCAC ACTTACCCTC CTATGTGAGC 361 GAACCAACCA ATCTAACCTT AACATTTCAA TATAATATCA ACAGAAAGTA ATGTGGAAGA 421 CTTAAACTCA TTAAATACAG ACCAATTCAT TAACTTCTAA AATTCAACAT CTATTATTCC 481 CCAAAATCTG GAAGTCATCA TCACAAGAAC ATCTACGATC AAATGACTAA ACTATGAGTA 541 TTCTAAAAGC TAAAAATACA TAAGAAGCTA GTCCATGCCG GAAGTTCAAG GCATCGAGAC 601 TTGAAGAAGA AGATCCAGTC CAAGCTAGAA GCATTAGCTC ACCCTGAATT TCCGATGTAG 661 TAAGACTGGC TTGAATTACT GTTGAGTTGA GGACGATGGC ACGTTTGCTG CACTCCACAA 721 ATAAACAAGA AGAGAACATA AAAGTAGGGG TCAGTACAAA ACACGGGTAC TGAGTAGATA 781 TCATCGGCCA ACTCAAAATA GAAATCAATA TATATACCAA GTAATATCAT AAAATCAACT 841 ATGATACTCA ACATGTAGCA ACAACAAATA CTATATCATT AACAATTACC GTCAAGTTCA 901 CACATGAGGA CTCAAGCCTC AATACCATAC TCATTTGGGA ATCATGTTCA TTAGATTGAG 961 TATATTAACA TCTTTCAAGA TTCATTATCT TTATTTCTCT TGTGTCGGTA CGTGACACTC 1021 CGCTCCCTCA ATATTCATTA ATCCTCTTGT GTCGGTACGT GACACTCCGA TCCCCTAAAT 1081 CTATATGTCG GAACGTGACA CTCCGATCCC CTAAATCTAC GTGTCGGTTC GTGACACCTG 1141 ATCCCCTAAA TCTACGTGTC GGTTCGTGAC ACCCGATCCC CTAAATCTAC GTGTCGGTTC 1201 GTGACACCCG ATCCCCTAAA TCTACGTGTC GGTTCGTGAC ACCCGATCCC CTAATCTATG 1261 TGTTGGTTCG TGACACCTGA TCCCTTAATC TACGTGTCGG TTTGTGACAC CCGATCCCCT 1321 AATTCTACGT GTCAGTTCGT GACACCCGAT CCCCTAATCT CATTCTATCA ATTCATCAAG 1381 CCTTCTCCCT TACCAAGGCA TCATCAATCT CATTACTTTA GTTCATCAAG CCTTCTCCCT 1441 TACCAAGGCA TCATCATTAA AAAGAGATTA GGTTTTTACA AGATTTGGGA TTCAATAACT 1501 TCATCATGCT TATATAATAA CAATTATATA GTTACATTCA TGCAAGCATA CAATTAAGCA 1561 CATAGCAGGG TTTACAATAT TATCAATACA TATCATTCTC TATTAAGAGT TTACTACGAA 1621 TATCGTAAGA GAAACAATAA CCTACCTCCA CCGAAGACTA Predicted gene structure (within gDNA segment 59244 to 54067): Exon 1 57979 56989 ( 991 n); cDNA 44 1035 ( 992 n); score: 0.812 Intron 1 56988 56957 ( 32 n); Pd: 0.000 (s: 0.70), Pa: 0.000 (s: 0.66) Exon 2 56956 56703 ( 254 n); cDNA 1036 1269 ( 234 n); score: 0.701 MATCH C08HBa0294K15.1- SGN-U315285- 0.790 1245 0.750 C PGS_C08HBa0294K15.1-_SGN-U315285- (57979 56989,56956 56703) Alignment (genomic DNA sequence = upper lines): TGCCGGTGTT GGTGTTGGCG CAGTTGTTGC TCTAGTTCTA ACCATCTGTG AAATAGAGTG 57920 ||| |||||| | || ||||| ||| ||||| |||||||||| |||||||| | |||||||||| TGCTGGTGTT GATGCTGGCG TAGTCGTTGC TCTAGTTCTA ACCATCTGCG AAATAGAGTG 103 AAGATGGTCA GATACCAATT TGTATCACCT AGATACCAAT TGGATCCAAG TAAAAGCACG 57860 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| ||| |||||| AAGATGGTCA GATACCAATT TGTATCACCT AGATACCAAT TGGACCCAAG TAATAGCACG 163 AAAGAAGGAA AGAATGGAAT TTTCCTAAAG TCTTATAGCC TCTCAAAGAA AAGTAAAGGC 57800 |||||| ||| |||||||||| ||||| |||| |||||||||| |||||| ||| |||||||||| AAAGAA-GAA AGAATGGAAT TTTCCAAAAG TCTTATAGCC TCTCAAGGAA AAGTAAAGGC 222 GTCCCCCTAC CGTTCCTCAA GACTCTACTA GACTTGTTCT TGTGTGATGA GACCAACGAA 57740 ||||||||| ||||||| || |||||||||| |||| ||||| |||||||||| |||||||||| ATCCCCCTAC CGTTCCTTAA GACTCTACTA GACTCGTTCT TGTGTGATGA GACCAACGAA 282 CCTAATGCTC TGATACCAAG TTTGTCACGA CCCAAAACGG GCCGCGAGTG GCACCCACTC 57680 |||||||||| |||||||||| |||||||||| || ||| ||| | |||| || |||||||| | CCTAATGCTC TGATACCAAG TTTGTCACGA CCAAAACCGG GTTGCGACTG GCACCCACAC 342 TTACCCTCCT ATGTGAGAGA ACCAACCAAT CTAAACCCCA ACAATTCAAC GATAATA--A 57622 |||||||||| ||||||| || |||||||||| || |||| | ||| ||||| |||||| | TTACCCTCCT ATGTGAGCGA ACCAACCAAT CT-AACCTTA ACATTTCAA- TATAATATCA 400 ATAGAATATA ATGCGGAAGA ATTAAAACTC ATTAACGA-A -ATCAA-TAA TTAACTTCTA 57565 | |||| || ||| |||||| || |||||| ||||| | | | ||| | | |||||||||| ACAGAAAGTA ATGTGGAAGA CTT-AAACTC ATTAAATACA GACCAATTCA TTAACTTCTA 459 AAACTCAAAA CTTATCATTA TCCCCAAAAT CTGGAAGTCA TCATCACAAG AACATCTATC 57505 ||| |||| | ||| | | |||||||||| |||||||||| |||||||||| |||||||| AAATTCAACA TCTATTA-T- TCCCCAAAAT CTGGAAGTCA TCATCACAAG AACATCTACG 517 CTCAAATTAC TAAATCTAAG AGTA-TCTAA GAAGCT-AAA ATAAGTAAAA GAGATAGTCC 57447 |||||| || |||| ||| | |||| ||||| ||||| ||| ||| ||| | || |||||| ATCAAATGAC TAAA-CTATG AGTATTCTAA -AAGCTAAAA ATACATAAGA -AGCTAGTCC 574 ATGTCCGAAC TTCAAGACAT CAAGACGCGA AGGAAAGAAT CCAGTCCGAG CTAGGAACAA 57387 ||| | ||| |||||| ||| | |||| || || | | || ||||||| || |||| | || ATGCCGGAAG TTCAAGGCAT CGAGACTTGA AGAAGAAGAT CCAGTCCAAG CTAGAAGCAT 634 TATCTCACCC TGAA-ATCTG ATTATGCTGA AGTCTGGCTA GAGTTGCGGT TGAGTCAAAG 57328 || ||||||| |||| || | | | | | | || |||||| || || | || ||||| | | TAGCTCACCC TGAATTTCCG A-TGTAGT-A AGACTGGCTT GAATTACTGT TGAGTTGAGG 692 TCGATGGCAC GTTTGCTGCA CTCCACAAAT -AACAAGAAA GAAACATACA AGTAGGGGTC 57269 ||||||||| |||||||||| |||||||||| |||||||| |||||| | |||||||||| ACGATGGCAC GTTTGCTGCA CTCCACAAAT AAACAAGAAG AGAACATAAA AGTAGGGGTC 752 AGTACAAGGC ACAAGTACTG AGTAGGTATC ATCGGCCAAC TCAAAATAGA AAACAACATA 57209 ||||||| | || |||||| ||||| |||| |||||||||| |||||||||| || ||| ||| AGTACAAAAC ACGGGTACTG AGTAGATATC ATCGGCCAAC TCAAAATAGA AATCAATATA 812 TAT--CATAT AATAACATAA AATCAACTAC AATACTCAAC AGACAACAAC AACAAGTACC 57151 ||| || | |||| ||||| ||||||||| ||||||||| | | |||| ||||| ||| TATACCAAGT AATATCATAA AATCAACTAT GATACTCAAC ATGTAGCAAC AACAAATACT 872 ATAACCATTG GCCACAACC- -CAAGCGCAT CTATGAGGAC TCACTCCTCC ACACCATACT 57093 || | |||| | | ||| |||| || |||||||| ||| |||| | |||||||| AT-ATCATTA ACAATTACCG TCAAGTTCAC ACATGAGGAC TCAAGCCTCA ATACCATACT 931 CGTTTGGAAA ATAGTTTCTT TAAACCTGAG TATATAAACA TGATTCAAGA TTCATTCT-T 57034 | ||||| || | ||| | || | |||| ||||| |||| | ||||||| |||||| | | CATTTGGGAA TCATGTTCAT TAGA-TTGAG TATATTAACA TCTTTCAAGA TTCATTATCT 990 TTACTATCCT GGTGTCGGAA CGTGACACTC CGATCCTTTA CTACTATCCT GATGTCGGAA 56974 ||| | || ||||||| | |||||||||| || ||| | | || | TTATTTCTCT TGTGTCGGTA CGTGACACTC CGCTCCCTCA ATATT..... .......... 1035 CGTGACACCC GATCCACTAC TACTATCCTG GTGTCGGAAC GTGACAC-CC GATCCATTAC 56915 | || | || ||||||| || ||||||| || ||||| | .......... .......CAT TAATCCTCTT GTGTCGGTAC GTGACACTCC GATCC---CC 1075 TACTATCCTG GTGTCGGAAC GTGACAC-CC GATCCATTAC TACTATCCTG GTGTCGGGAC 56856 || ||| ||||||||| ||||||| || ||||| | || ||| ||||||| | TA-AATCTAT ATGTCGGAAC GTGACACTCC GATCC---CC TA-AATCTAC GTGTCGGTTC 1130 GTGATACCCG ATCCACTATT ACTATCCTGG TGTCGGAACG TGACACCCGA TCCACAATTA 56796 |||| ||| | |||| ||| | ||| | |||||| || |||||||||| ||| | || GTGACACCTG ATCCCCTA-- A--ATCTACG TGTCGGTTCG TGACACCCGA TCC-C--CTA 1183 CTATCCTGGT GTCGGAACGT GACACCCGAT TCACTACTAC TATCCTGGTG TCGGAACGTG 56736 ||| || ||||| ||| ||||||||| || | ||| ||| ||| |||| |||| -AATCTACGT GTCGGTTCGT GACACCCGA- TC-C-CCTA- AATCTACGTG TCGGTTCGTG 1238 ACACCTGATC CACTAACCTC ATTCTTTTAG TTC 56703 ||||| |||| | |||| || | | | || | ||| ACACCCGATC CCCTAATCT- A-TGTGTTGG TTC 1269 hqPGS_C08HBa0294K15.1-_SGN-U315285- (57979 56989,56956 56703) ******************************************************************************** EST sequence 64 -strand 920 n (File: SGN-U335071-) 1 AAGGCTAGAT AATTATATAA TGAGAAGATG ATGCCTTGTG TAAAAGAAGC CTGATGGATT 61 GGGGATCGGG TGCCACGTTC CGGTACCAGG ATAGAATGAT TATGAGGATC GGAGTGTCAC 121 GTTCCGACCC CAGGATAGAT ATGGGATCGG GTGCCACGTT CCGGTACCAG GATAGAATAT 181 GAGGATCGGA GTGTCACGTT CCGACACCAG GATAGAAAAT GGATCGGGTG CCACGTTCCG 241 GTACCAGGAT AGAATGAGGA TCGGAGTGCC ACGTTCCGGC ACCAGGATAG AAATAGAGGA 301 TCGGAGTGTC ACGTACCGAC ACAAGAGGAA GAAAGATAAT GAATCTTGAA AGATAATGAA 361 TATACTCAAT CTAATGAACT TAATTCCCAA ATGAGTATGG TATTGAGGCT TGAGTCCTCA 421 TGTGTGAACT CGGTTGTAGT TATTGATGAA TTCATGGTGT TATTGCTACA TGTTGAGTAT 481 TGTAGTTGAT TTACATTATT ATTGATATAT ACTGTTCCCT ATTTTGAGTT GGCCGATGAT 541 ATCTACTCAG TACGTGTGGT TGTACTGACC CCTACTTTCA TGTTTTCCTC TTTGTTATTT 601 GTGTAATGCA GCAAACGTTC CGTCAACTTC AACTCAACAG TAGATCTAGC CAGTCTTCAC 661 TTCATCGGAA AATTCAGGGT GAGCTAATGC GTCTAGCTTG GACTGGGTCT TCTTCTTCAA 721 GTCTTGATGC CTTGAATTTC CGGCATGGAC TAGCTTTTTA GTTATTTTGT TCTTAGACAT 781 TCCTAGTTAA GTAATTTGAG ATAGATGTTC TTGTGATGAT GACTTCCAGA TTTTGGGGAT 841 AATAATAATA GTATTGAATT GTTTTTATTA AAAAAAAAAA AAAAAAAAAA AAAAACTCGA 901 GGGGGGGCCC GGTCCCAATG Predicted gene structure (within gDNA segment 54550 to 58918): Exon 1 56725 56761 ( 37 n); cDNA 63 99 ( 37 n); score: 0.811 Intron 1 56762 56795 ( 34 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.79) Exon 2 56796 57553 ( 758 n); cDNA 100 848 ( 749 n); score: 0.776 PPA cDNA 870 896 MATCH C08HBa0294K15.1+ SGN-U335071- 0.776 795 0.864 C PGS_C08HBa0294K15.1+_SGN-U335071- (56725 56761,56796 57553) Alignment (genomic DNA sequence = upper lines): GGATCAGGTG TCACGTTCCG ACACCAGGAT AGTAGTAGTG AATCGGGTGT CACGTTCCGA 56784 ||||| |||| ||||||||| |||||||| || | | GGATCGGGTG CCACGTTCCG GTACCAGGAT AGAATGA... .......... .......... 99 CACCAGGATA GTAATTGTGG ATCGG-GTGT CACGTTCCGA CACCAGGATA GTAATAGTGG 56843 | | || || ||||| |||| |||||||||| | |||||||| | ||| || .......... .TTA-TGAGG ATCGGAGTGT CACGTTCCGA CCCCAGGATA G--ATATGGG 145 ATCGGGTATC ACGTCCCGAC ACCAGGATAG TAGTAATGGA TCGG-GTGTC ACGTTCCGAC 56902 ||||||| | |||| ||| |||||||||| | ||| |||| ||||| |||||||||| ATCGGGTGCC ACGTTCCGGT ACCAGGATAG AATATGAGGA TCGGAGTGTC ACGTTCCGAC 205 ACCAGGATAG TAGTAATGGA TCGGGTGTCA CGTTCCGACA CCAGGATAGT AGTAGTGGAT 56962 |||||||||| | |||||| ||||||| || ||||||| | ||||||||| | | | |||| ACCAGGATAG -A-AAATGGA TCGGGTGCCA CGTTCCGGTA CCAGGATAG- AAT-GAGGAT 261 CGG-GTGTCA CGTTCCGACA TCAGGATAGT AGTAAAGGAT CGGAGTGTCA CGTTCCGACA 57021 ||| ||| || ||||||| || |||||||| | || ||||| |||||||||| ||| |||||| CGGAGTGCCA CGTTCCGGCA CCAGGATAGA AATAGAGGAT CGGAGTGTCA CGTACCGACA 321 CCAG-GATAG TAAAAGAATG AATCTTGAAT CAT-GTTTAT ATACTCAGGT TTAAAGAAAC 57079 | || | || || | |||| ||||||||| || | || ||||||| | ||| ||| CAAGAGGAAG AAAGATAATG AATCTTGAAA GATAATGAAT ATACTCA-AT CTAATGAACT 380 TATTTTCCAA ACGAGTATGG TGTGGAGGAG TGAGTCCTCA TAGATGCGCT TGGGTTGTGG 57139 || || |||| | |||||||| | | |||| |||||||||| | || | | |||||| | TAATTCCCAA ATGAGTATGG TATTGAGGCT TGAGTCCTCA TGTGTGAAC- TCGGTTGTAG 439 CCAATGGT-T ATGGTACTTG TTGTTGTTGT CTGTTGAGTA TTGTAGTTGA TTTTATGTTA 57198 | || | || || || ||| | ||||||||| |||||||||| |||| ||| TTATTGATGA ATTCATGGTG TTATTGCTAC ATGTTGAGTA TTGTAGTTGA -TTTACATTA 498 TTATATGATA TATGTTGTTT TCTATTTTGA GTTGGCCGAT GATACCTACT CAGTACTTGT 57258 |||| ||||| ||| |||| ||||||||| |||||||||| |||| ||||| |||||| ||| TTAT-TGATA TATACTGTTC CCTATTTTGA GTTGGCCGAT GATATCTACT CAGTACGTGT 557 GCCTTGTACT GACCCCTACT TGTATG-TTT CTTTCTTGTT ATTTGTGGAG TGCAGCAAAC 57317 | ||||||| |||||||||| | ||| ||| | | ||||| ||||||| | |||||||||| G-GTTGTACT GACCCCTACT TTCATGTTTT CCTCTTTGTT ATTTGTGTAA TGCAGCAAAC 616 GTGCCATCGA CTTTGACTCA ACCGCAACTC TAGCCAGACT TCAGCATAAT C--AGATTTC 57375 || || || | ||| ||||| || | | || ||||||| || ||| | | || | | | ||| GTTCCGTCAA CTTCAACTCA ACAGTAGATC TAGCCAGTCT TCA-CTTCAT CGGAAAATTC 675 AGGGTGAGAT ATTGTTCCTA GCTCGGACTG GATTCTTTCC TTCGCGTCTT GATGTCTTGA 57435 |||||||| | | || ||| ||| |||||| | | | | | ||| ||||| |||| ||||| AGGGTGAGCT AATGCGTCTA GCTTGGACTG GGTCTTCTTC TTCAAGTCTT GATGCCTTGA 735 AGTTCGGACA TGGACTATCT CTTTTACTTA TTTTAGCTTC TTAGATACTC TTAGATTTAG 57495 | ||| | || ||||||| || ||||| ||| |||| | ||| ||||| | || ||| || || ATTTCCGGCA TGGACTAGCT -TTTTAGTTA TTTT-G-TTC TTAGACATTC CTAG-TTAAG 791 TAATTTGAGG ATAGATGTTC TTGTGATGAT GACTTCCAGA TTTTGGGGAT AATGATAA 57553 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| ||| |||| TAATTTGA-G ATAGATGTTC TTGTGATGAT GACTTCCAGA TTTTGGGGAT AATAATAA 848 hqPGS_C08HBa0294K15.1+_SGN-U335071- (56725 56761,56796 57553) ******************************************************************************** EST sequence 40 +strand 926 n (File: SGN-U335319+) 1 GTCATAAAGC TTGGAGCTCC ACCGCGGTGG CNGGCCGCTC TAGAACTAGT GGATCCCCCG 61 GGCTGCAGGA ATTCGGCACG AGGGGAAAAA CTGGCAGAAA TGACGGACCC CACGACGGAC 121 CATCATGGGC ACGACGGACC GTCGCAGGGT CTCATTTCAA AACACTTAGG AAATCTGAAA 181 TTGGGTACTG AAAATCGACT CTCTGAACTT CGTAACGGAA TGGCAAGACG GACCGTCACA 241 GGCGTGATGG ACCATCACAG AGTCTTCAGT GAAAATCCAG TCTCTGAACC TTGCGACGAC 301 CTGCAGGACG GACCGTCGCA GGCACAACGG GCTGTCACAG GCTGCGTAAA TCCCAGTCTG 361 AGTCGGAATT CCTCAATTGT TTTAAGGGAC GTTTTTGACT ATTCCTGCTT TAATTATAAA 421 GTTAGTGGGT TAATGTTAAT AAGTCTAATT ACTTGGGGGT TAAAAGAGGT AACCTTAAGT 481 TAATTAGTGG GTTATTATTG CCATATTTTA TTCTTAATTA TATACTAATT AGGGTAAAAG 541 AAAGAGGGTT TGAATAAAGA AAATAGAAAG AACAAGAGAA AGAGAGAGAA AGTCGAACGA 601 GAAAGAGGAT CGAACGAGAG GAAAAAACAC AAAGCTTGGG AAATCACTTG CTTGATCACG 661 AATCTTCGGT GGAGGTAGGT TATGGTTTCT CTTACGATAT TCGTAGTAAG CTCTTAATAG 721 CGAATAATAT GTATTGATAA TATTGTAAAC CCTTCTATGT GCTAAATTGT GTGCTTGCAT 781 GAATGTATTA TATAATTGTG ATTATATAAG CATGATGAAT TTATTGAATC CCAAATCTTG 841 CAAAACCCTG ATCTTTTTGT TAATGATGAA GCCCTAATAT TAAAAAGGCC TGATGAACTA 901 AAATTATGAA ATTGATGATC CCTGGA Predicted gene structure (within gDNA segment 51537 to 61121): Exon 1 55936 56638 ( 703 n); cDNA 111 822 ( 712 n); score: 0.752 Intron 1 56639 59730 (3092 n); Pd: 0.000 (s: 0.65), Pa: 0.135 (s: 0) Exon 2 59731 59747 ( 17 n); cDNA 823 838 ( 16 n); score: 0.765 MATCH C08HBa0294K15.1+ SGN-U335319+ 0.752 720 0.778 C PGS_C08HBa0294K15.1+_SGN-U335319+ (55936 56638,59731 59747) Alignment (genomic DNA sequence = upper lines): CACGACGGAC CGTCGTGGGC ACGACGGACC GTCGAGGGGG TCTCGTTCCA AAACACTTAG 55995 |||||||||| | || ||||| |||||||||| |||| ||| |||| || || |||||||||| CACGACGGAC CATCATGGGC ACGACGGACC GTCG-CAGGG TCTCATTTCA AAACACTTAG 169 ATTCTAAAAA TTTGGGTAAT GAGAA-CAAC TCTCTGAACT TCGCGACGAC ATGGCAGGAC 56054 | || ||||||| | || || | || |||||||||| ||| ||| |||||| ||| GAAATCTGAA ATTGGGTACT GAAAATCGAC TCTCTGAACT TCGTAACGGA ATGGCAAGAC 229 GGACCGTCGT GGGCACGACG GACCGTCACA GACCCTTTAA TG-AAATTCA GTCTCTGAAC 56113 |||||||| ||| || | |||| ||||| || ||| | || |||| || |||||||||| GGACCGTCAC AGGCGTGATG GACCATCACA GAGTCTTCAG TGAAAATCCA GTCTCTGAAC 289 TTTGTGACGG AAGCAGCAGG ACGGACCGTC ATAGGCACGA CGGGCCGTCA CAGGCTGCGT 56173 ||| ||| | | | ||||| |||||||||| |||||| | ||||| |||| |||||||||| CTTGCGAC-G -ACCTGCAGG ACGGACCGTC GCAGGCACAA CGGGCTGTCA CAGGCTGCGT 347 -AA-CCTTGA CTGGGTCAGA TTTCTGTTAA ATGTTTTAAG GGGCGTTTTG GACTATTTCT 56231 || || | ||| ||| || ||| | || ||||||||| || |||||| ||||||| || AAATCCCAGT CTGAGTCGGA ATTC-CTCAA TTGTTTTAAG GGACGTTTTT GACTATTCCT 406 GCTTATAATT ATAAAGTTAG TGGGTTAATG TTAATAATTC -AATTACTTG GGGGTTAAAG 56290 |||| ||||| |||||||||| |||||||||| ||||||| || ||||||||| ||||||||| GCTT-TAATT ATAAAGTTAG TGGGTTAATG TTAATAAGTC TAATTACTTG GGGGTTAAAA 465 GTGATAACCT TGAAATAAAT AGTGGGTTAC TTTTACCATC TTTTATACTT AATTATATGG 56350 | | |||||| | | ||| | ||||||||| | || |||| |||||| ||| |||||||| GAGGTAACCT TAAGTTAATT AGTGGGTTAT TATTGCCATA TTTTATTCTT AATTATATAC 525 TAATTAGGGT AAAAGAAAAA GAGTTTGAAT AAGGAAAAAT AGAAAGAACA A-A-AGAGAG 56408 |||||||||| |||||||| | | |||||||| || | ||||| |||||||||| | | | |||| TAATTAGGGT AAAAGAAAGA GGGTTTGAAT AAAG-AAAAT AGAAAGAACA AGAGAAAGAG 584 GGACGAA--C GAGCGAG--A GAAGAGAGAA TGA-AGAGGA AAGCAAAGAC CTTGAGGAGT 56463 || || | || |||| | || || ||| || || | || || | | |||| | | | AGAGAAAGTC GAACGAGAAA GAGGATCGAA CGAGAGGAAA AAACACAAAG CTTGGGAAAT 644 AGCTTGCGTG ATCACGAATT CTTCGGTGGA GGTAGGTTAT GG-TT-T-AT GCTAT-TTCA 56519 ||||| || |||||||| | |||||||||| |||||||||| || || | | | || ||| CACTTGCTTG ATCACGAA-T CTTCGGTGGA GGTAGGTTAT GGTTTCTCTT ACGATATTCG 703 TAGTAAACTC TTAATAGCGA ATGATATGTA TTGGGTAGTA TTGTAAAGTC TTACATATGC 56579 |||||| ||| |||||||||| || ||||||| || | || || ||||||| | || || ||| TAGTAAGCTC TTAATAGCGA ATAATATGTA TT-GATAATA TTGTAAACCC TTCTATGTGC 762 TTAATTGTAT GCTTGCATG- ATGTGATTAT GTAATTGT-A ATGGGTTGGA AAGATGAGGT 56637 | |||||| | ||||||||| |||| ||||| ||||||| | | | | | ||||| | TAAATTGTGT GCTTGCATGA ATGT-ATTAT ATAATTGTGA TTATATAAGC ATGATGAATT 821 TGTGAAGCTT AAACCTAAAA CCCTCTGTGT TAATGATGAT GCCTTGGTAT AAAAGAAGGC 56697 | T......... .......... .......... .......... .......... .......... 822 TTGATGAACT AAAAGAATGA GGTTAGTGGA TCAGGTGTCA CGTTCCGACA CCAGGATAGT 56757 .......... .......... .......... .......... .......... .......... 822 AGTAGTGAAT CGGGTGTCAC GTTCCGACAC CAGGATAGTA ATTGTGGATC GGGTGTCACG 56817 .......... .......... .......... .......... .......... .......... 822 TTCCGACACC AGGATAGTAA TAGTGGATCG GGTATCACGT CCCGACACCA GGATAGTAGT 56877 .......... .......... .......... .......... .......... .......... 822 AATGGATCGG GTGTCACGTT CCGACACCAG GATAGTAGTA ATGGATCGGG TGTCACGTTC 56937 .......... .......... .......... .......... .......... .......... 822 CGACACCAGG ATAGTAGTAG TGGATCGGGT GTCACGTTCC GACATCAGGA TAGTAGTAAA 56997 .......... .......... .......... .......... .......... .......... 822 GGATCGGAGT GTCACGTTCC GACACCAGGA TAGTAAAAGA ATGAATCTTG AATCATGTTT 57057 .......... .......... .......... .......... .......... .......... 822 ATATACTCAG GTTTAAAGAA ACTATTTTCC AAACGAGTAT GGTGTGGAGG AGTGAGTCCT 57117 .......... .......... .......... .......... .......... .......... 822 CATAGATGCG CTTGGGTTGT GGCCAATGGT TATGGTACTT GTTGTTGTTG TCTGTTGAGT 57177 .......... .......... .......... .......... .......... .......... 822 ATTGTAGTTG ATTTTATGTT ATTATATGAT ATATGTTGTT TTCTATTTTG AGTTGGCCGA 57237 .......... .......... .......... .......... .......... .......... 822 TGATACCTAC TCAGTACTTG TGCCTTGTAC TGACCCCTAC TTGTATGTTT CTTTCTTGTT 57297 .......... .......... .......... .......... .......... .......... 822 ATTTGTGGAG TGCAGCAAAC GTGCCATCGA CTTTGACTCA ACCGCAACTC TAGCCAGACT 57357 .......... .......... .......... .......... .......... .......... 822 TCAGCATAAT CAGATTTCAG GGTGAGATAT TGTTCCTAGC TCGGACTGGA TTCTTTCCTT 57417 .......... .......... .......... .......... .......... .......... 822 CGCGTCTTGA TGTCTTGAAG TTCGGACATG GACTATCTCT TTTACTTATT TTAGCTTCTT 57477 .......... .......... .......... .......... .......... .......... 822 AGATACTCTT AGATTTAGTA ATTTGAGGAT AGATGTTCTT GTGATGATGA CTTCCAGATT 57537 .......... .......... .......... .......... .......... .......... 822 TTGGGGATAA TGATAAGTTT TGAGTTTTAG AAGTTAATTA TTGATTTCGT TAATGAGTTT 57597 .......... .......... .......... .......... .......... .......... 822 TAATTCTTCC GCATTATATT CTATTTATTA TCGTTGAATT GTTGGGGTTT AGATTGGTTG 57657 .......... .......... .......... .......... .......... .......... 822 GTTCTCTCAC ATAGGAGGGT AAGAGTGGGT GCCACTCGCG GCCCGTTTTG GGTCGTGACA 57717 .......... .......... .......... .......... .......... .......... 822 AACTTGGTAT CAGAGCATTA GGTTCGTTGG TCTCATCACA CAAGAACAAG TCTAGTAGAG 57777 .......... .......... .......... .......... .......... .......... 822 TCTTGAGGAA CGGTAGGGGG ACGCCTTTAC TTTTCTTTGA GAGGCTATAA GACTTTAGGA 57837 .......... .......... .......... .......... .......... .......... 822 AAATTCCATT CTTTCCTTCT TTCGTGCTTT TACTTGGATC CAATTGGTAT CTAGGTGATA 57897 .......... .......... .......... .......... .......... .......... 822 CAAATTGGTA TCTGACCATC TTCACTCTAT TTCACAGATG GTTAGAACTA GAGCAACAAC 57957 .......... .......... .......... .......... .......... .......... 822 TGCGCCAACA CCAACACCGG CAAGACAAGA TGCGTCTGAG CCAGCCACTG GGGTTGTAGC 58017 .......... .......... .......... .......... .......... .......... 822 TCGAAGATGA GCAGTGGCAA GAGGCCGTGG TAGAGGTCGC GGGAGGACGT CCTCTAGAGG 58077 .......... .......... .......... .......... .......... .......... 822 AAGAGGACAA GCACCTGGCC CATCTAGTAC TAGGGCGGTG ACTCCTCCAC CGACTGAGGA 58137 .......... .......... .......... .......... .......... .......... 822 AGTAGTAAGA GAGGGTGAGG AAGGGGAGGA TGAACAAGTG CAGAATGAGG AATTACCACC 58197 .......... .......... .......... .......... .......... .......... 822 CCAACCTACC CCAGAGATGA TTAACCAGGT TCTTGCTTAT CTTAGCGGGT TATCTGATCA 58257 .......... .......... .......... .......... .......... .......... 822 AGGCCAGACA CCTCCAGTGT TTTCTGCACC AACGCCTCAG GTTTCGGGAG TACAACATGC 58317 .......... .......... .......... .......... .......... .......... 822 AGCTGCTATG GCTCCCCGCA TGGATGCCTC ATTGGAAATA GGCACGTTTC CTCGATTGAC 58377 .......... .......... .......... .......... .......... .......... 822 TACAGGACCT ATAATGACAA GTGATCAGCA CGAACTTTTC AATAAGTTCT TGAAATTGAA 58437 .......... .......... .......... .......... .......... .......... 822 ACCTCCAGTC TTCAAGGGTG CTGAATCTGA GGATGCCTAT GATTTTGTGG TTGATTGTCA 58497 .......... .......... .......... .......... .......... .......... 822 TGAGTTTCTA CATAAGATGG GCATAGTGGA ACGATTCGGT GTTGAGTTTG TAACCTATAA 58557 .......... .......... .......... .......... .......... .......... 822 GTTTCAGGGA AATTCCAAAA TGTGGTGGCG ATCGTATGTC GAGTGTCAAC CAGCACAGGC 58617 .......... .......... .......... .......... .......... .......... 822 ACCGCCTATG ACTTGGGCAT CATTCTCTAG CTTGTTTATG GAGAAGTATA TACCCCGGAC 58677 .......... .......... .......... .......... .......... .......... 822 TTAGAGGGAT AGGAGTAGAG ATGAGTTCTT GAGCCTAGAG CAAGGCAGGA TGTCGGTTAC 58737 .......... .......... .......... .......... .......... .......... 822 TGCGTATGAG GCTAAGTGTC GTGCATTATC TAGGTATGCC ACCCAGCTTT GCTTCAGTCC 58797 .......... .......... .......... .......... .......... .......... 822 ACAAGAGCGG ATTCGCCATT TTGTGAAGGG ATTGAGGTCA GATTTGCAGA TTCCAGCCTT 58857 .......... .......... .......... .......... .......... .......... 822 ACAGGTATCT ACTGCAGCAA AATCCTTTTA GGAAGTGGTA GACTTTGTGA TAGAGGTGGA 58917 .......... .......... .......... .......... .......... .......... 822 GGGAGTGAAG CCAGATGATT TCACCATGGC ATCAACAACT AAGAAGTTTC GTAAGGGAGG 58977 .......... .......... .......... .......... .......... .......... 822 TGAGTTTAGT AGTTCTTACT CCAGAGGGCA GAGTTCAGGA GGGTATCCAG CCCGACCTAT 59037 .......... .......... .......... .......... .......... .......... 822 TCAGTCTTCA CTACAGGCTG TAGCTGGGGG TCCACAGACC GGTCAACATT TCTCTGAGTT 59097 .......... .......... .......... .......... .......... .......... 822 TGGAGGTTAT CCCCAGACTC CGTCGTTCTC ACAGAGACCT ATGCTCGAAC CCAGAGAGTG 59157 .......... .......... .......... .......... .......... .......... 822 TTATGGATGT GGGGAAATTG GACATATTAA GAGATATTGT CCAAAACAGA GTTACAGACC 59217 .......... .......... .......... .......... .......... .......... 822 TTCAATAGTC AGGGGTAGAG GTGGTCATGG AAGAGGCCGC TATTCTGGAG AACATGGTGG 59277 .......... .......... .......... .......... .......... .......... 822 CCGAGGTAAT GGTGGTCACA CAAATCAACC GGGGTGGCGG ACAAGCCGGA GCGACTGCAG 59337 .......... .......... .......... .......... .......... .......... 822 CACAACATGG TAGGGGCAAC GGATAGACAG GTGATAGGGC CCATTGTTAT GCTTTCCCTG 59397 .......... .......... .......... .......... .......... .......... 822 GGAGGTCTGA AGCGGAGACA TCTGATGTTG TTATCACAGG TAATCTTTTG GTTTGTGATT 59457 .......... .......... .......... .......... .......... .......... 822 GCATGGCTTC TGTATTATTT GATCCTGGAT CCACATTTTC ATATGTATCT TCCTCATTTG 59517 .......... .......... .......... .......... .......... .......... 822 CTACTGGTCT TAATTTACAT TGTGAATTGC TTGACATGCC TATTCGTGTT TCTACTCCGG 59577 .......... .......... .......... .......... .......... .......... 822 TGGGTGAGTC TGTGATAGTT GAAAAGGTGT ATAGGTCTTG TCTTGTGACT TTTATGGGGA 59637 .......... .......... .......... .......... .......... .......... 822 GTAATACTCA TGTAGACTTG GTTATCTTAG AAATGGTTGA TTTCGATGTA ATTCTGGGTA 59697 .......... .......... .......... .......... .......... .......... 822 TGACTTGGCT TTCTCCAAAC TTTGCAATCT TAGACTGTAA TGCCAAAACT 59747 | || || | ||||| || .......... .......... .......... ...ATTG-AA TCCCAAATCT 838 hqPGS_C08HBa0294K15.1+_SGN-U335319+ (55936 56638) ******************************************************************************** EST sequence 8 +strand 830 n (File: SGN-U343842+) 1 TTGGAACAAA AGCTCCTGCT CCACCGCGGT GGCGGCCGCT CTAGAACTAG TGGATCCCCC 61 GGGCTGCAGG AATTCGGCAC GAGCTGAGTC GACGGATCCC ACGACGGACC GTCATGAGCA 121 CGACGGACCG TGGAGGGTGT CTCGTTCCAA AACACTTAGA ATTCTGAAAT TTGGGTACTG 181 AGATCGACTC TCTGAACTTC GCGACGAAAT GGCACGACGG ACCGTCACAG GCATGACGGG 241 CTGTCACAAA CCCTTAGTGA AATTTAATCT CTGAACTTTG TGACGGAAGC AGCAGGACGG 301 ACCGTCGCAG GCACGACTGG TCGTCACAGA CTGCGTAACC CTGACTGGGT CGGATTTTTG 361 TTAAATGTTT TAAGGGGCGT TTTGGACTAT TCCTGCTTAT AATTATGAAA TTAGTGGTTT 421 AATGTTAATA ATTCAATTAC TTGGGGGGTT GAAGGAGATA ACCTTGAATT AATTAGCGGG 481 TTACTTTAGG TATCTTTCAT TCTTAATGAT ATGCTAATCA GGGTTAAAGA AAAAGGGTTT 541 GATTAAGACC AATACAACGA TCACAGGGAG GGAGGAACCA ACGATCCAAA AGACAGAACT 601 AAGACGAAAG CAGAACTTTA GAAAGTTAAC TTTTTGGATC ACAAATATCT TCCTTGGAGT 661 GGGTTATGGG TACTCCTTTT TCATGGGCAA CTCTTAATGG CCAATAAAAT GGTTTTGGAA 721 GGAATGGTAA ACCCTCCTTT ATCCTTAATT GGTGGTTCTG CCTAAGGGGA TTAATTATTG 781 GGGTTAAATA GGCCATAAGG GGCCTTATGA AACTAAATTT TTTAAACTTG Predicted gene structure (within gDNA segment 52835 to 61228): Exon 1 55936 56585 ( 650 n); cDNA 100 750 ( 651 n); score: 0.802 MATCH C08HBa0294K15.1+ SGN-U343842+ 0.802 650 0.783 C PGS_C08HBa0294K15.1+_SGN-U343842+ (55936 56585) Alignment (genomic DNA sequence = upper lines): CACGACGGAC CGTCGTGGGC ACGACGGACC GTCGAGGGGG TCTCGTTCCA AAACACTTAG 55995 |||||||||| |||| || || |||||||||| || ||||| | |||||||||| |||||||||| CACGACGGAC CGTCATGAGC ACGACGGACC GTGGAGGGTG TCTCGTTCCA AAACACTTAG 159 -ATTCTAAAA ATTTGGGTAA TGAGAACAAC TCTCTGAACT TCGCGACGAC ATGGCAGGAC 56054 ||||| || ||||||||| ||||| | || |||||||||| ||||||||| |||||| ||| AATTCT-GAA ATTTGGGTAC TGAGATCGAC TCTCTGAACT TCGCGACGAA ATGGCACGAC 218 GGACCGTCGT GGGCACGACG GACCGTCACA GACCCTTTAA TGAAATTCAG TCTCTGAACT 56114 |||||||| |||| |||| | | |||||| |||| ||| ||||||| | |||||||||| GGACCGTCAC AGGCATGACG GGCTGTCACA AACCC-TTAG TGAAATTTAA TCTCTGAACT 277 TTGTGACGGA AGCAGCAGGA CGGACCGTCA TAGGCACGAC GGGCCGTCAC AGGCTGCGTA 56174 |||||||||| |||||||||| ||||||||| ||||||||| || |||||| || ||||||| TTGTGACGGA AGCAGCAGGA CGGACCGTCG CAGGCACGAC TGGTCGTCAC AGACTGCGTA 337 ACCTTGACTG GGTCAGATTT CTGTTAAATG TTTTAAGGGG CGTTTTGGAC TATTTCTGCT 56234 ||| |||||| |||| ||||| ||||||||| |||||||||| |||||||||| |||| ||||| ACCCTGACTG GGTCGGATTT TTGTTAAATG TTTTAAGGGG CGTTTTGGAC TATTCCTGCT 397 TATAATTATA AAGTTAGTGG GTTAATGTTA ATAATTCAAT TACTT-GGGG GTTAAAGGTG 56293 ||||||||| || ||||||| ||||||||| |||||||||| ||||| |||| ||| |||| | TATAATTATG AAATTAGTGG TTTAATGTTA ATAATTCAAT TACTTGGGGG GTTGAAGGAG 457 ATAACCTTGA AATAAATAGT GGGTTACTTT TACCATCTTT TATACTTAAT TATATGGTAA 56353 |||||||||| | ||| ||| |||||||||| |||||| || |||||| ||||| ||| ATAACCTTGA ATTAATTAGC GGGTTACTTT AGGTATCTTT CATTCTTAAT GATATGCTAA 517 TTAGGGTAAA AGAAAAAGAG TTTGAATAAG GAAAAATAGA AAGAACAAAA GAGAGGGACG 56413 | ||||| || |||||||| | ||||| ||| || |||| | | || | | | | |||||| | TCAGGGTTAA AGAAAAAGGG TTTGATTAA- GACCAATACA ACGATC-ACA GGGAGGGAGG 575 AACGAGCGA- -GAGAAGAGA GAATGAAGAG GAAAGCAAAG ACCTT-GAGG AGTAGCTTGC 56470 ||| | ||| | |||| | ||| |||| ||||||| | || || || || ||| AACCAACGAT CCAAAAGACA GAACTAAGAC GAAAGCAGA- ACTTTAGAAA GTTAACTTTT 634 GTGATCACGA AT-TCTTCGG TGGAGGTAGG TTATGGTTTA TGCTATTTCA TAGTAAACTC 56529 |||||| | || ||||| |||| || || |||||| | | || ||||| | | ||||| TGGATCACAA ATATCTTCCT TGGA-GTGGG TTATGGGTAC TCCTTTTTCA TGGGCAACTC 693 TTAATAGCGA ATGATAT-GT ATTGGGTAGT ATTGTAAAGT CTTACATATG CTTAATT 56585 ||||| || | || | || || |||| | || ||||| || ||| ||||||| TTAATGGCCA ATAAAATGGT TTTGGAAGGA ATGGTAAACC CTCCTTTATC CTTAATT 750 hqPGS_C08HBa0294K15.1+_SGN-U343842+ (55936 56585) ******************************************************************************** EST sequence 38 +strand 1156 n (File: SGN-U315287+) 1 GCAAAATAGG ATTCCTCTAC ACGTTTTAGG GGTCGTTTTG GACTATTCTT TCCTTAATTA 61 TAAAGATTGA GGGTTAATAT TAATAGGTCT AATTACTTGG GGGTTAAAAG AGGTAACCTT 121 AAGTTAATTA GTGGGTTTTA TTGTCCTCCT TTACACTTAA TTATACTTTT AATTAGGGTA 181 AAAAGAAGGA GGGTTTGAAT AAAACAAAAC AAAAGAAAAG AACAGAAAGA GAGGAGAAAC 241 GAACGAGTAG AGAGAGAGAA ACGAAGAGGA TAGCAAGGAT TTTGAGAAGA TAGCTTGTTG 301 ATTCAATTCT TCGGTGGAGG TAGGTTATGG TTTATGTTAC GATATTCGTA GTGAACTCTT 361 AATAGTGAAT ATTATGTGTT GATAGTATTG TAAACCCTGC TATGTGCTTA AGTTGTATGC 421 TTGCATGATT ATGATTATGA AATTGTTATG AATTAACAAA GCATGATGAA GCTATTGAAT 481 CCCAAATCTT GAAAGAACCC TAATTCACTT GATATATTAT ATAATAAGAT TGATGAGGCC 541 TTAGTATGAG AGAAGGCTTG ATAAATTATA TAATGAGAAT GATGATGCCT TAGTGTAGAA 601 GAAGGCTTGA TGAATTAGGG GATCGGGTGC CACGTTTCGG TACCAGGATA GAATGAATAT 661 GAGGATCGGA GTGTCACGTT CCGACACCAG GATAGAATAT GAGGATCGGA GTGTCACGTT 721 CCGACACCAG GATAGAATAT GAGGATCGGG TGCCACGTTC CGGTACCAGG ATAGAATGAA 781 TATGAGGATC GGAGTGTTAC GTTCCGACAC CAGGATAGAA TATGAGGATC GGGTGCCACG 841 TTCCGGTACC AGGATAGAAT GAATATGAGG ATCGGAGTGC CACGTTCCGG CACCAGGATA 901 GAAATAGAGG AGCGGAGTGT CACGTACCGA CACAAGAGGA AGAAAGATAA TGAATCTTGA 961 AAGATAATGA ATATACTCAA TCTAATGAAC TTAATTCCCA AATGAGTATG GTATTGAGGC 1021 TTGAGTCCTC ATGTGTGAAC TTGACGGTAA TTGTTAATGA TNAAGAAATT GCTATTGCTA 1081 CATGATGAGT ATTGTAGTTG ATTTACATTA TTATTGATAT ATATTGTTCC CTATTTTGAG 1141 TTAGCGATGA TATCTA Predicted gene structure (within gDNA segment 52840 to 62250): Exon 1 56190 57029 ( 840 n); cDNA 10 856 ( 847 n); score: 0.663 MATCH C08HBa0294K15.1+ SGN-U315287+ 0.663 840 0.727 C PGS_C08HBa0294K15.1+_SGN-U315287+ (56190 57029) Alignment (genomic DNA sequence = upper lines): GATTTCTGTT AAATGTTTTA AGGGGCGTTT TGGACTATTT CTGCTTATAA TTATAAAGTT 56249 |||| || | | | |||||| ||| ||||| ||||||||| | | | ||| |||||||| | GATTCCT-CT ACACGTTTTA GGGGTCGTTT TGGACTATTC TTTCCT-TAA TTATAAAGAT 67 AGTGGGTTAA TGTTAATAAT TC-AATTACT TGGGGGTTAA AGGTGATAAC CTTGAAATAA 56308 | ||||||| | |||||| || ||||||| |||||||||| | | | |||| ||| | ||| TGAGGGTTAA TATTAATAGG TCTAATTACT TGGGGGTTAA AAGAGGTAAC CTTAAGTTAA 127 ATAGTGGGTT ACTTTTACCA TCTTTTATAC TTAATTATA- TGGTAATTAG GGT-AAAAGA 56366 ||||||||| || || || |||| || ||||||||| | ||||||| ||| |||||| TTAGTGGGTT TTATTGTCC- TCCTTTACAC TTAATTATAC TTTTAATTAG GGTAAAAAGA 186 AAAAGAGTTT GAAT--AAGG AAA-AATAG- AAAGAACA-A AAGAGAGGGA CGAACGAGCG 56421 | || |||| |||| || ||| || || |||||||| | |||||| ||| ||||| || AGGAGGGTTT GAATAAAACA AAACAAAAGA AAAGAACAGA AAGAGA-GGA GAAACGAACG 245 AG-AGA-AGA GAGAA-TGAA GAGGAAAGCA AAGACCTTGA GGAG-TAGCT TGCGTGATCA 56477 || ||| ||| ||||| ||| ||||| |||| | || |||| | || ||||| || |||| AGTAGAGAGA GAGAAACGAA GAGGATAGCA AGGATTTTGA GAAGATAGCT TG-TTGAT-T 303 CGAATTCTTC GGTGGAGGTA GGTTATGGTT TATG---CTA T-TTCATAGT AAACTCTTAA 56533 | |||||||| |||||||||| |||||||||| |||| | | | ||| |||| ||||||||| C-AATTCTTC GGTGGAGGTA GGTTATGGTT TATGTTACGA TATTCGTAGT GAACTCTTAA 362 TAGCGAATGA TATGTATTGG GTAGTATTGT AAAGTCTTAC ATATGCTTAA -TTGTATGCT 56592 ||| |||| ||||| || | ||||||||| ||| || || ||||||| ||||||||| TAGTGAATAT TATGTGTT-G ATAGTATTGT AAACCCTGCT ATGTGCTTAA GTTGTATGCT 421 TGCATGA-TG TGATTATGTA ATTGTAATGG GTTGGAAAGA TGAGGTTGTG AAGCTTAAAC 56651 ||||||| | |||||||| | ||||| ||| || | | | | | || || || TGCATGATTA TGATTATGAA ATTGTTATGA ATT-AACAAA GCATGATGAA GCTATTGAAT 480 CTAAAACCCT CTGTGTTAAT GATGATGC-C TTGGTATAAA AGAAGGCTTG ATGAACTAAA 56710 | ||| || || || | || | | ||| |||| | | | || | | | CCCAAA-TCT -TGAAAGAAC CCTAATTCAC TTGATATATT ATATAATAAG ATTGA-T-GA 536 AGAATGAGGT TAGTGGATCA GGTGTCACGT TCCGACACCA GGATAGTAGT AGTGAATCGG 56770 | | | | || || | || | | | | | || | | | || | GGCCTTA-G- TATGAGAGAA GGCTTGA-TA AATTATATAA TGAGAATGAT GATGCCT-TA 592 GTGTCACGTT CCGACACCAG GATAGTAATT GTGGATCGGG TGTCACGTTC CGACACCAGG 56830 |||| | | || | ||| | | | | |||||||| || |||||| || |||||| GTGT-A-G-- AAGAAGGCTT GAT-GAATTA GGGGATCGGG TGCCACGTTT CGGTACCAGG 647 ATAG--T-AA TA-GTGGATC GG-GTATCAC GTCCCGACAC CAGGATAGTA GTAATGGATC 56885 |||| | || || | ||||| || || |||| || ||||||| |||||||| | ||||| ATAGAATGAA TATGAGGATC GGAGTGTCAC GTTCCGACAC CAGGATAGAA TATGAGGATC 707 GG-GTGTCAC GTTCCGACAC CAGGATAGTA GTAATGGATC GGGTGTCACG TTCCGACACC 56944 || ||||||| |||||||||| |||||||| | ||||| ||||| |||| ||||| ||| GGAGTGTCAC GTTCCGACAC CAGGATAGAA TATGAGGATC GGGTGCCACG TTCCGGTACC 767 AGGATAG--T -AGTA-GTGG ATCGG-GTGT CACGTTCCGA CATCAGGATA GTAGTAAAGG 56999 ||||||| | | || | || ||||| |||| ||||||||| || ||||||| | | ||| AGGATAGAAT GAATATGAGG ATCGGAGTGT TACGTTCCGA CACCAGGATA GAATATGAGG 827 ATCGGAGTGT CACGTTCCGA CACCAGGATA 57029 ||||| ||| ||||||||| ||||||||| ATCGG-GTGC CACGTTCCGG TACCAGGATA 856 hqPGS_C08HBa0294K15.1+_SGN-U315287+ (56190 57029) ******************************************************************************** EST sequence 18 +strand 954 n (File: SGN-U335077+) 1 NATCTTTTAG CTGGAGCTCC ACCGCGGTGG CGNGCCGCTC TAGAACTAGT GGATCCCCCG 61 GGCTGCAGGA ATTCGGCACG AGGGAATAAA GAAAATAGAA AGAACAAGAG AGAGAGGAAG 121 AATCGAACGA GAAGGGAGAA ACAAAGCTTG GAGAAAAATT TGCTTGCTTG ATCACTAATC 181 TTCGGTGGAG GTAGGTTATG GTTTTCATGC TTTCATAGTA AACTCTTAAT AGAGAATGAT 241 ATGTATTGGT AGTATTGTAA ACCCTGCTAT ATGCTTAATT GTATGCATGC ATGAACGTGA 301 TTATATAATT GTGATTATAT TAAGCATGAT GAAGTTATTG AATCCCAAAT CTTGATAAAA 361 ATCTAATCTC TTATTAATGA TGATGCCTTG GTATAGAAGA AGGCTTGATG AATAAAAGTA 421 ATGGGATTGA TGATGCCTTG GTATAGAGAA GGCCTGATGA TTTACAGAAT GATATTAGTG 481 GATCGGAGTG TCACGTACCG ACACATGCAG GGGATCGGGT GTCACGAACC GACACGTAGA 541 ATTAGGGGAT CGGGTGTCAC GAACTGGCAC GTAGAATTAG GGGATCGGGT GTCACGAACC 601 GGCACGTAGA TTAGGGGATC AGGTGTCACG AACCGACACG TAGAATTAGG GGATCGGGTG 661 TCACGAACCG ACACGTAGAA TTAGGGGATC GGNTGTCACG AACCGACACA TAGATATAGG 721 GGATNCGGAG TGTCACGTAC CGACACAAGA GGAAATATGA ATATGANGGA TCGGAGTGTC 781 ACGTACCGAC ACCAGAGATT TAAGGATATG AAATCTGAAA GAATGTATAT ACTCAATCTA 841 CGAACATAAT TCCAAATGAA TATGGGGTTG AAGCTTGAGC CCTCATGGAT GAACTGGATG 901 GGACCTAATG AGGATATAAT AACCTGTGGG GGCTCATGGT TAAGTTTTAA GGTA Predicted gene structure (within gDNA segment 54103 to 62735): Exon 1 56377 57029 ( 653 n); cDNA 84 716 ( 633 n); score: 0.664 MATCH C08HBa0294K15.1+ SGN-U335077+ 0.664 653 0.684 C PGS_C08HBa0294K15.1+_SGN-U335077+ (56377 57029) Alignment (genomic DNA sequence = upper lines): GAATAAGGAA AAATAGAAAG AACAAAAGAG AGGGACGAAC GAGCGAGAGA AGAGAGAATG 56436 |||||| ||| || ||||||| ||| ||||| || || ||| | ||| | ||| || | GAATAAAGAA AA-TAGAAAG AAC--AAGAG AGAGAGGAAG AATCGA-ACG AGA-AGGGAG 138 AAGAGGAAAG CAAAGACCTT GAGGAGTAGC TTGCGTGATC ACGAATTCTT CGGTGGAGGT 56496 || | |||| | || | | | || |||| ||||| || || |||| |||||||||| AA-A-CAAAG CTTGGA---G AAAAATTTGC TTGCTTGATC ACTAA-TCTT CGGTGGAGGT 192 AGGTTATGGT TTATGCTATT TCATAGTAAA CTCTTAATAG CGAATGATAT GTATTGGGTA 56556 |||||||||| || || |||||||||| |||||||||| ||||||||| ||||| |||| AGGTTATGGT TTTCATGCTT TCATAGTAAA CTCTTAATAG AGAATGATAT GTATT-GGTA 251 GTATTGTAAA GTCTTACATA TGCTTAATTG TATGCTTGCA TG-ATGTGAT TATGTAATTG 56615 |||||||||| || ||| |||||||||| ||||| |||| || | ||||| ||| |||||| GTATTGTAAA CCCTGCTATA TGCTTAATTG TATGCATGCA TGAACGTGAT TATATAATTG 311 T-AATGGGTT -GGAAAGATG AGGTT-GTGA AGCTTAAA-C ---CT-AAAA -C-CCTCT-G 56664 | | | || | | |||| | ||| ||| | | ||| | | |||| | ||| TGATTATATT AAGCATGATG AAGTTATTGA ATCCCAAATC TTGATAAAAA TCTAATCTCT 371 TGTTAATGAT GATGCCTTGG TATAAAAGAA GGCTTGATGA ACTAAAAG-A ATGAGGTTAG 56723 | |||||||| |||||||||| |||| ||||| |||||||||| | |||||| | ||| | || TATTAATGAT GATGCCTTGG TATAGAAGAA GGCTTGATGA A-TAAAAGTA ATGGGATTGA 430 TGGATCAGGT GTCACGTTCC GACACCAGGA TAGTAGTAGT GAATCGGGTG TCACGTTCCG 56783 || | || | | | | || | | | || ||| || | TGATGCCTTG GTATAGAGAA GGCCTGATGA TTTACAGAAT GATATTAGTG GATCGGAGTG 490 ACAC-CA-GG ATAGTAATTG TGGATCGGGT GTCACGTTCC GACACCAGGA TAGTAATAGT 56841 ||| | | | | | ||||||||| |||||| || |||| | | ||| | ||| TCACGTACCG ACACATGCAG GGGATCGGGT GTCACGAACC GACA-C--G- TAGAATTAGG 546 GGATCGGGTA TCACGTCCCG ACACCAGGAT AGTAGTAATG GATCGGGTGT CACGTTCCGA 56901 ||||||||| ||||| | | || | | | || | || | |||||||||| |||| ||| GGATCGGGTG TCACGAACTG GCA-C--G-T AGAATTAGGG GATCGGGTGT CACGAACCGG 602 CACCAGGATA GTAGTAATGG ATCGGGTGTC ACGTTCCGAC ACCAGGATAG TAGTAGTGGA 56961 || | | || | | || || ||| |||||| ||| ||||| | | | ||| | ||| ||| CA-C--G-TA G-ATTAGGGG ATCAGGTGTC ACGAACCGAC A-C--G-TAG AATTAGGGGA 653 TCGGGTGTCA CGTTCCGACA TCAGGATAGT AGTAAAGGAT CGGAGTGTCA CGTTCCGACA 57021 |||||||||| || |||||| | | ||| | || |||| ||| ||||| || |||||| TCGGGTGTCA CGAACCGACA -C--G-TAGA ATTAGGGGAT CGG-NTGTCA CGAACCGACA 708 CCAGGATA 57029 | |||| CATAGATA 716 hqPGS_C08HBa0294K15.1+_SGN-U335077+ (56377 57029) ******************************************************************************** EST sequence 29 +strand 647 n (File: SGN-U315283+) 1 ACGCCTTTTG CTTTATGAAA CTAAAAAATA AAAATTGAAG TTTTGAAACG ATAGAGGTTT 61 AAAATTTGAA AGTCTGCTTA GAGAGTTAAG GCTTAGAAAG TTTAACTAAG ACGGAATCTT 121 AAAAGATTAA TATCTCAAAT TTGCAAAGTT TGGCTAAGTA AATCGTGATA AAAGTTCAAA 181 TAAATTTGCA AAGGGTAAAA ATAAAAATAA TCAAATAAGT TAGTCGTTGG AAAACCGTAT 241 TTAACGGAGT GTCTTAGGTG CCTTAAACAC CTTCCTAAGA CGCTAATAAG AATCCCGAAT 301 CCTAAAAAAT ATTTTCAAAA CGACTTTTCT GTTTAAATTG TTTTGAGAAT GAGTTTTCTT 361 GATTTTTCTT AAAAATTAAG TGGCGACTCC TAAAGTCGAA AAATACTTTA AAATAAAACA 421 AACTCTTTTC GAAAAATCAC CTTTTTTCGA TAAAACAAAG CTTCTAGCTT GGACTGGATC 481 TTCTTCTTCA TGTCTTGATG CCTTGAAGTT CCGGCATGGA CTAGCTGTTT ATGTATTTTA 541 GCTTCTTAGA TACTCTTAGA TTTAGTAATT CGAAGTAGAT GTTCTTGTGA TGATAACTTC 601 CAGATTTTGG GAAATAATAG TTATTGAATT GGTTTTTATA AAAAAAA Predicted gene structure (within gDNA segment 50334 to 58512): Exon 1 51095 51151 ( 57 n); cDNA 393 448 ( 56 n); score: 0.579 Intron 1 51152 56357 (5206 n); Pd: 0.000 (s: 0.56), Pa: 0.932 (s: 0) Exon 2 56358 56368 ( 11 n); cDNA 449 459 ( 11 n); score: 0.818 Intron 2 56369 57388 (1020 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.80) Exon 3 57389 57560 ( 172 n); cDNA 460 627 ( 168 n); score: 0.843 Intron 3 57561 57649 ( 89 n); Pd: 0.000 (s: 0.86), Pa: 0.991 (s: 0) Exon 4 57650 57656 ( 7 n); cDNA 628 634 ( 7 n); score: 1.000 MATCH C08HBa0294K15.1+ SGN-U315283+ 0.777 247 0.382 C PGS_C08HBa0294K15.1+_SGN-U315283+ (51095 51151,56358 56368,57389 57560,57650 57656) Alignment (genomic DNA sequence = upper lines): AAGAGGAGAA AGGAGAAAAG AGAAAAGAAG CAAGATTCGA CAAGATCATC GAGTTTTGCT 51154 ||| || || | || | |||| || | ||||| || |||| | ||| AAGTCGAAAA ATACTTTAAA ATAAAACAAA CTCTTTTCGA -AAAATCACC TTTTTTC... 448 TGTGGATTTC GTCGGGGGTG ATCCCTACAA GGTATGTGAG TTCACATAGC CAGTGGCGGA 51214 .......... .......... .......... .......... .......... .......... 448 TGCACATTCA AGTGCATGGG TGCTTCAGCA CCCATTACAT TTGGAGACAA CAGTAATATA 51274 .......... .......... .......... .......... .......... .......... 448 ATTTGTATGA ATATGTAAAT TGAGCACCCA TTTTGGTACC AACTTCAAAT TACAAATAGT 51334 .......... .......... .......... .......... .......... .......... 448 TAAACACCCA TAACTAAGAA ACCCTGGATC CGCCACTACA CATAGCGCTG GGTTAGTTCA 51394 .......... .......... .......... .......... .......... .......... 448 CTCACGCGCC AATCATGATT TATTTCAGCG TTTTAAGTTC TTAAAAGCTT AGAAATTGAA 51454 .......... .......... .......... .......... .......... .......... 448 TTCATGATGG ATTTGTTGTA GTTATATTAA ATTCTTGATT CATTGAAATT GTTGAGGAGT 51514 .......... .......... .......... .......... .......... .......... 448 TGTTCAATCT GAATACATGA TTTTAGGTTT GATTTTCTGT AGAATTTGAT GTACTTTAAT 51574 .......... .......... .......... .......... .......... .......... 448 CATATAATCC ATTCGAAGTG TTTGGGGAAA GAATCCACGA GTTTAGAGGG TATAGAGTTG 51634 .......... .......... .......... .......... .......... .......... 448 AAAAGCGAAG AAGAAATTTC GTCGAACCCA TTCTGCATTT TGAAAATTTG TGTTTTCGCA 51694 .......... .......... .......... .......... .......... .......... 448 GAGCGATCAC AGACCTTTCT ACCTCAAAAG TATTTTCGCC ACCAAAATTG AATTACATCT 51754 .......... .......... .......... .......... .......... .......... 448 CTGCTTTGCG AAGCAGCTTT CCAGTAGTGA TTTCTTGATC GTTTCTCATG ATTAACTATC 51814 .......... .......... .......... .......... .......... .......... 448 TAAAATTATT CCAACACATC ATGAGATCTT TCCTATCACA AATCATGATC CTTGAATCCA 51874 .......... .......... .......... .......... .......... .......... 448 TAAACTAAAT TCAAGGTGAG TTAAGATTCA AGTCAAGAAA AATTAAGAGT CTAGTCAAGA 51934 .......... .......... .......... .......... .......... .......... 448 GAAGTTACAA GCCAAGTCAA GAGAAGTTAA GTGTCAAGTC AAGAGCAGTT CATAAAGTTT 51994 .......... .......... .......... .......... .......... .......... 448 TTAGAAGTCT TTTACAAATG TTTTAACTTT GTTTTATGAC TTGAGTTTTG AGTTCAATAA 52054 .......... .......... .......... .......... .......... .......... 448 ACAGTAAAAT TGAAGTTCAT TTCTTCAAAA GTATATGGAG ATTATGTATT CCAAAAGAGT 52114 .......... .......... .......... .......... .......... .......... 448 AAATGTTTTC ATATTTAAAC AAGAAAAGAA ATGAGATTTT CAAAAGTGCC TTTGAGCTAG 52174 .......... .......... .......... .......... .......... .......... 448 TTTTTCAATA AAGAATAAAT GTTTTCACAT TTCAATAAGA AAGGAAATTA AGATTTTCAA 52234 .......... .......... .......... .......... .......... .......... 448 AAGAGCCTTT GAGCTAGTTT TCAGTTAAAG AGTAAATGCT TTACAATTAA GCTAGAGAGG 52294 .......... .......... .......... .......... .......... .......... 448 AAACTAAGAT TTTCAAGATA ACATCTAAGC TAAGTCTTTG AGCAATTATC TCAAACCATA 52354 .......... .......... .......... .......... .......... .......... 448 GAAAGAAGTT ATGCTTCTAA GCATAAAGAG CTAGTATATT TTGGGAGTAG TATTGAACAC 52414 .......... .......... .......... .......... .......... .......... 448 CGATATGAAG GAGAGTTCAT ATAACTCACA ACCCCCTAAA ACCATGTAGC CATTATGGAT 52474 .......... .......... .......... .......... .......... .......... 448 AGAAAGGACC ATACTTTTTA GATGATTTCT TATTGTTTTT TAGCATAGAC TAGTGGATCC 52534 .......... .......... .......... .......... .......... .......... 448 ACTTAGTAAA GACGTCTTAT ATGACGACAA AGTATATGAC AATTTTGGAA GCATGAGCGA 52594 .......... .......... .......... .......... .......... .......... 448 GACACTGTAT CATCAATATA ACTCTTAAGT GATGATTGTC GGTTAAAGAA ACTCCCACAA 52654 .......... .......... .......... .......... .......... .......... 448 TTAAGACTAG CAACGGATCA GAATGGAACC ACTGGACCGG CACGAATCGG TACTATACCG 52714 .......... .......... .......... .......... .......... .......... 448 AAACGGAACG AGTTGACCGG TTCGTTGACC GACACCGAAA TGAACCGGAC CGGAATTATC 52774 .......... .......... .......... .......... .......... .......... 448 AAGACGAATA CTTGATTTCG TCTAGTCCCA CTATATACCG GGATGAAACA GGAATGAAAC 52834 .......... .......... .......... .......... .......... .......... 448 TGGATGGGAT AAACGGGACG ACACATTTAG TTATTTCAAA AAATATTTTT TAAAATTACG 52894 .......... .......... .......... .......... .......... .......... 448 AAATTATGAT TTTTTTTATT TTTTCTAAGT TTAAATTAAT AGTTTTTAAA TTTATAATTT 52954 .......... .......... .......... .......... .......... .......... 448 AATTTTTTAC TTAAGTTTAT AACATTTCAA AATTTGTAAC TTTTAAAGTT ATATTTATTT 53014 .......... .......... .......... .......... .......... .......... 448 AATAGTTCAA AATGATTTTT TTTATAATTT TAAATAAATA AGTTTATCGA TAACTCTCCT 53074 .......... .......... .......... .......... .......... .......... 448 CATTTGTCAA GTTTTAGAAT ATTTTCTTCT GATAAATTTA AATTACCTTA TTTTCGTCAC 53134 .......... .......... .......... .......... .......... .......... 448 AACCGGTTAA ATATGTTCAA ATATTTTATC ATTTTTTATT AGGTTGTTAT TTTGTTAAAT 53194 .......... .......... .......... .......... .......... .......... 448 TCACGTCATT AGTATATTTA TTACATTTAT TTTTTTATAA TCATTTTATT TGTTACATTT 53254 .......... .......... .......... .......... .......... .......... 448 ATTAACATTT ATTTTATATT TCTAGCACAG TCTAGAAAAT TATTTAAATA CGAGTGAGTT 53314 .......... .......... .......... .......... .......... .......... 448 TTACATACAC AGTTGATAGA TAATTTAAGG CCACAATTCC AAGCCCACAA AATTTGAGCC 53374 .......... .......... .......... .......... .......... .......... 448 TATTACATAT AATTATTTTT TTTCTATTTA GGGCTTTATG AGGTAAAAAA AGGTTGGACG 53434 .......... .......... .......... .......... .......... .......... 448 GATTTGTAGG GATGTAAACG TTAATTAATA AATAATAATT AATTGGAATC GGATCAGAAT 53494 .......... .......... .......... .......... .......... .......... 448 CGAAATAAAT TGGGATAAAT CGGTACCGTA CAGCGGTACC AAATTGCGGT TCCATTCCGT 53554 .......... .......... .......... .......... .......... .......... 448 TCCTCATATC GATTCACGAT GTCTTATTCC ATTCCGTAGG CAACCGAATC GGACCGGTAT 53614 .......... .......... .......... .......... .......... .......... 448 CGGTACAACC CGGTCCGTTG TCCAACCTTA CCCACAATAG TATTTTGTAT TTTTATATAC 53674 .......... .......... .......... .......... .......... .......... 448 GTCAGATATA ATTATATTTT TATATACAAA TAGAGTTCAT ATTGTATCTT TGCATATATA 53734 .......... .......... .......... .......... .......... .......... 448 CGCCATTATC ATTGTGTTTC TAAATAAACA GAATTAAAGT TCATGTTTTA AAGCTTTTCT 53794 .......... .......... .......... .......... .......... .......... 448 TTGTATTGCA TTTATTTACA TTGCTTTCTA TTGAAATTAG TTGAGTTCAG TTTACTTAAG 53854 .......... .......... .......... .......... .......... .......... 448 TAAAGGCTAG GTAAGTGTTT CTTTCGGACT CTTTCCAAGC TTATGTCTTG TTTTAGTATT 53914 .......... .......... .......... .......... .......... .......... 448 TCAACTCGCA TACTCTTGTA TTCAATTTAT TGATATTAGT TGGCCTGCAT CATATTATGA 53974 .......... .......... .......... .......... .......... .......... 448 TGCAAACACA GGTAATCATA ATCAGCACGC AGCACACCGT TGATCCAGTG AGCACTCTAG 54034 .......... .......... .......... .......... .......... .......... 448 AGTCAGTTAG TGAACTTCCT TGTATTCCAG AGGACTCTTT TAATTTATTG CTTTCAGTGA 54094 .......... .......... .......... .......... .......... .......... 448 TTTTACTAGT TCATTAGGAT GTCATCGGGT TTGTCCCTAA CATCCATCTC AATTGTTTTA 54154 .......... .......... .......... .......... .......... .......... 448 GAGGCTTCAT AGTTTGCAGT CAGATGTTAG TCCATTTATT ATCTTTTTGT TATTTAATTA 54214 .......... .......... .......... .......... .......... .......... 448 TGTTCATACT TGAGTTGTCA TTTTAGCTAA GTTAAATGTT TAATGTTAAA ACATCATGCA 54274 .......... .......... .......... .......... .......... .......... 448 TTAAGTTCGA GATAGTTGAG ATATTTAGCA TTTGAATATT TTTCTTTATG TTTTAAGTCT 54334 .......... .......... .......... .......... .......... .......... 448 TTCGTTGAGT AAATAAGTCA GACCAAGAAT TCGTTTGAGG CCAATAATGA TTCTCGAGTG 54394 .......... .......... .......... .......... .......... .......... 448 TCCGTCTCAT CTAAGTGTAG GCTCAGAAGC GTGACTTTAT GTTTTAGGTG TATTTATACC 54454 .......... .......... .......... .......... .......... .......... 448 ATCAGGACAT CTATTAGATA ATTGTTGTGA TATAGTCTAT AAATATATCT ATTAATAAGC 54514 .......... .......... .......... .......... .......... .......... 448 CATCTTACTG TTATCGGATA ATAAAGATGA TATTAAAAAA AATAAAAATT ATAAACAGAA 54574 .......... .......... .......... .......... .......... .......... 448 TGTCTTTTAT GTGAAAAATA ACGACCTACC AAATATATTT TTCTAAACGT AGCATATACA 54634 .......... .......... .......... .......... .......... .......... 448 TTAATGTATG TGTCCACGTA TAATTCAAAA TTTTATTTAT TTACGTAAAT TGAAGAATAA 54694 .......... .......... .......... .......... .......... .......... 448 AAGTTTGGGT ACAAGCAAAA ATACATATTC GGGGCCACAT ATTACATATA TTTGATAAAT 54754 .......... .......... .......... .......... .......... .......... 448 CTTCCTATAG ATATGTATAA TTTTTGTATA AAGTAAAACT TAACTAAATT TTTGAATACG 54814 .......... .......... .......... .......... .......... .......... 448 TTAATAAATA AATGTATAAA ATTACAAAAA AAAAATGGAT TCATAGATAA TAAGATTTTA 54874 .......... .......... .......... .......... .......... .......... 448 ATTTAGTTAC TGTATATATC TGAAATTTCG GTCATAATTT AGGGATATTC ATATCTTATC 54934 .......... .......... .......... .......... .......... .......... 448 CCTATTTTTA ATTAAAAATA ATAATTATTT ATATTACTTT GTATAATTTA CAATTTTTTA 54994 .......... .......... .......... .......... .......... .......... 448 ATGTATTCAT TCGTTAATTG TTTTTTACCT ATATAATTCT TAAACATTCT TATGAAATTT 55054 .......... .......... .......... .......... .......... .......... 448 TTAACTGTCA CTGTTACTGA ATTGTCGTTA AAAATAATTA AACATAAAAA AAATGAGCGA 55114 .......... .......... .......... .......... .......... .......... 448 GAACTAGTTT TTCACATGTA TGATGTGTGA AGCAGTCTGA ATTTGTACAG AGAAAAATGC 55174 .......... .......... .......... .......... .......... .......... 448 AAAATGACCG AATGCTGAAC ACTTATTAAT TTCCATGTAA ATCATTCAAC ATTTTGAAAA 55234 .......... .......... .......... .......... .......... .......... 448 ATCTTCCCAT GTATCTTTAA ACGAGGGAAG TATTGGAAAC ACTTCTAAAT TATATGTAAA 55294 .......... .......... .......... .......... .......... .......... 448 TCATTAGTTT TACTTTTTGA ATTATTAACA ATTTTTAAAA AAAAGAACCT TTAATTTACT 55354 .......... .......... .......... .......... .......... .......... 448 TGATTGACTA AACTTCAACA CACCCCTAAT CTTGCAACCC GAATATAATA TACTTTTAAT 55414 .......... .......... .......... .......... .......... .......... 448 TTTTCATCAA GTTTAGAAGT GTTTTCAACA CTTATTTCAA CTTTTTATTA AGAGTCTCAT 55474 .......... .......... .......... .......... .......... .......... 448 ACTTCTATAA AAGTTCGTGA CCAGTTTCTT ATGTCATGCA ATATATCGAC GTGTAGGGCT 55534 .......... .......... .......... .......... .......... .......... 448 GTGTATCGGT CGGTTCGATT CGATTTTGAA GTTTATCGGG TTGTCTTATT GGTTATCGGT 55594 .......... .......... .......... .......... .......... .......... 448 TTGTGGAGAT GCTAAACCGT TATAAAACCA TTAAGATATT GAATTATCGG TTATTGATTT 55654 .......... .......... .......... .......... .......... .......... 448 ATCAGCTTTT AATCGTTATC GGTTCGATTA TCAATTTAAC CGTTAAGATT TGACACAAAA 55714 .......... .......... .......... .......... .......... .......... 448 GAAAAAACAT TGAAAATCAC TTAGAAACAA GGTGACAAAC CAAATAAACC GTGCACTTAA 55774 .......... .......... .......... .......... .......... .......... 448 GTTCACATGT TACATCTTGG TCAAACGCAA ACACTTTTAC ATTGTTGAAT AACCAGACAA 55834 .......... .......... .......... .......... .......... .......... 448 CCAAAAATAA AAGTAGGTGT AACGACCTGT TAGTCGTTTT GAGCAGTAGA GTTTATTCTG 55894 .......... .......... .......... .......... .......... .......... 448 GTAATAGCTG TCTGGGTCGA CGGATCCCGG ACCGTCGTGG GCACGACGGA CCGTCGTGGG 55954 .......... .......... .......... .......... .......... .......... 448 CACGACGGAC CGTCGAGGGG GTCTCGTTCC AAAACACTTA GATTCTAAAA ATTTGGGTAA 56014 .......... .......... .......... .......... .......... .......... 448 TGAGAACAAC TCTCTGAACT TCGCGACGAC ATGGCAGGAC GGACCGTCGT GGGCACGACG 56074 .......... .......... .......... .......... .......... .......... 448 GACCGTCACA GACCCTTTAA TGAAATTCAG TCTCTGAACT TTGTGACGGA AGCAGCAGGA 56134 .......... .......... .......... .......... .......... .......... 448 CGGACCGTCA TAGGCACGAC GGGCCGTCAC AGGCTGCGTA ACCTTGACTG GGTCAGATTT 56194 .......... .......... .......... .......... .......... .......... 448 CTGTTAAATG TTTTAAGGGG CGTTTTGGAC TATTTCTGCT TATAATTATA AAGTTAGTGG 56254 .......... .......... .......... .......... .......... .......... 448 GTTAATGTTA ATAATTCAAT TACTTGGGGG TTAAAGGTGA TAACCTTGAA ATAAATAGTG 56314 .......... .......... .......... .......... .......... .......... 448 GGTTACTTTT ACCATCTTTT ATACTTAATT ATATGGTAAT TAGGGTAAAA GAAAAAGAGT 56374 | ||||| ||| .......... .......... .......... .......... ...GATAAAA CAAA...... 459 TTGAATAAGG AAAAATAGAA AGAACAAAAG AGAGGGACGA ACGAGCGAGA GAAGAGAGAA 56434 .......... .......... .......... .......... .......... .......... 459 TGAAGAGGAA AGCAAAGACC TTGAGGAGTA GCTTGCGTGA TCACGAATTC TTCGGTGGAG 56494 .......... .......... .......... .......... .......... .......... 459 GTAGGTTATG GTTTATGCTA TTTCATAGTA AACTCTTAAT AGCGAATGAT ATGTATTGGG 56554 .......... .......... .......... .......... .......... .......... 459 TAGTATTGTA AAGTCTTACA TATGCTTAAT TGTATGCTTG CATGATGTGA TTATGTAATT 56614 .......... .......... .......... .......... .......... .......... 459 GTAATGGGTT GGAAAGATGA GGTTGTGAAG CTTAAACCTA AAACCCTCTG TGTTAATGAT 56674 .......... .......... .......... .......... .......... .......... 459 GATGCCTTGG TATAAAAGAA GGCTTGATGA ACTAAAAGAA TGAGGTTAGT GGATCAGGTG 56734 .......... .......... .......... .......... .......... .......... 459 TCACGTTCCG ACACCAGGAT AGTAGTAGTG AATCGGGTGT CACGTTCCGA CACCAGGATA 56794 .......... .......... .......... .......... .......... .......... 459 GTAATTGTGG ATCGGGTGTC ACGTTCCGAC ACCAGGATAG TAATAGTGGA TCGGGTATCA 56854 .......... .......... .......... .......... .......... .......... 459 CGTCCCGACA CCAGGATAGT AGTAATGGAT CGGGTGTCAC GTTCCGACAC CAGGATAGTA 56914 .......... .......... .......... .......... .......... .......... 459 GTAATGGATC GGGTGTCACG TTCCGACACC AGGATAGTAG TAGTGGATCG GGTGTCACGT 56974 .......... .......... .......... .......... .......... .......... 459 TCCGACATCA GGATAGTAGT AAAGGATCGG AGTGTCACGT TCCGACACCA GGATAGTAAA 57034 .......... .......... .......... .......... .......... .......... 459 AGAATGAATC TTGAATCATG TTTATATACT CAGGTTTAAA GAAACTATTT TCCAAACGAG 57094 .......... .......... .......... .......... .......... .......... 459 TATGGTGTGG AGGAGTGAGT CCTCATAGAT GCGCTTGGGT TGTGGCCAAT GGTTATGGTA 57154 .......... .......... .......... .......... .......... .......... 459 CTTGTTGTTG TTGTCTGTTG AGTATTGTAG TTGATTTTAT GTTATTATAT GATATATGTT 57214 .......... .......... .......... .......... .......... .......... 459 GTTTTCTATT TTGAGTTGGC CGATGATACC TACTCAGTAC TTGTGCCTTG TACTGACCCC 57274 .......... .......... .......... .......... .......... .......... 459 TACTTGTATG TTTCTTTCTT GTTATTTGTG GAGTGCAGCA AACGTGCCAT CGACTTTGAC 57334 .......... .......... .......... .......... .......... .......... 459 TCAACCGCAA CTCTAGCCAG ACTTCAGCAT AATCAGATTT CAGGGTGAGA TATTGTTCCT 57394 | | || .......... .......... .......... .......... .......... ....GCTTCT 465 AGCTCGGACT GGATTCTTTC CTTCGCGTCT TGATGTCTTG AAGTTCGGAC ATGGACTATC 57454 |||| ||||| |||| | | |||| |||| ||||| |||| |||||| | | |||||||| | AGCTTGGACT GGATCTTCTT CTTCATGTCT TGATGCCTTG AAGTTCCGGC ATGGACTAGC 525 TCTTTTACTT ATTTTAGCTT CTTAGATACT CTTAGATTTA GTAATTTGAG GATAGATGTT 57514 | ||| | | |||||||||| |||||||||| |||||||||| |||||| || | |||||||| TGTTT-ATGT ATTTTAGCTT CTTAGATACT CTTAGATTTA GTAATTCGAA G-TAGATGTT 583 CTTGTGATGA TGACTTCCAG ATTTTGGGGA TAATGATAAG TTTTGAGTTT TAGAAGTTAA 57574 |||||||||| | |||||||| ||||| |||| ||| ||| | |||| CTTGTGATGA TAACTTCCAG ATTTT-GGGA -AATAATAGT TATTGA.... .......... 627 TTATTGATTT CGTTAATGAG TTTTAATTCT TCCGCATTAT ATTCTATTTA TTATCGTTGA 57634 .......... .......... .......... .......... .......... .......... 627 ATTGTTGGGG TTTAGATTGG TT 57656 ||||| || .......... .....ATTGG TT 634 hqPGS_C08HBa0294K15.1+_SGN-U315283+ (57389 57560,57650 57656) ******************************************************************************** EST sequence 94 +strand 1437 n (File: SGN-U317064+) 1 ACGAATAGGC ATATCAAGAA ATTCACAATG TAAATTTAGA CCATTAGCAA ATGAGGAAGA 61 TACATAAGAA AACGTGGATC CAGGATCAAA CAATACGGAA GCCATGCAAT CACAAACTAG 121 AAGATTACCT GTGATGACAG CATCAGATGC CTCCGCTTCA GACCGCCCAG GGAAAGCGTA 181 ACAATGGGCC CTATCGTTTG TCTGCCCATT GCCCCTACCA TGTTGTGATG TAGTGGCCCC 241 AGTTTGCCCA TTACCTCTGC CGTTTTGGTG ACCACCATTA CCTCGACCAC CACGTCCTCC 301 AGAATAACGG CCTCTACCAT GACCACCTCT ACCTCTAGCT ATTGGGGGTC TATAACTTGG 361 TCCGGGACAA TTTATCCTAA TATGTCCAAT CTCCCCACAT CCATAACATT CTCTGGAGTC 421 ACTCATAGGC CCCTTGGAGA AGTGTTGACC GGTCTGAGGT GGACCCCCAA CTACAGTCTG 481 TAGTGAAGAC TGAATGGGTC GAGCTGAGTA ACCTCCGGAA CCTTGTCCTC TAGAGTAAGA 541 ACCCTTAAAC TCACCTCCCT TTCGAAACCT CTTTGATGTC GATGTCGTGG TGAAGTCGTC 601 TGGCTTCACT CCTTCCACTT CTATCACAAA GTCTACCACT TCTTGGAAGG ATTTTGCCGT 661 TGCCGCTACC TGTAAGGACG AAATCCGCAA TTCTGACCTC AACCCCTTCA CAAACCGGCG 721 AATCCGCTCT TGAGGACTGA AACAGAGTTG AGTGGCATAT CTGGATAGTG CACGAAACTT 781 AGCCTCATAA GCATTAACTG ACACCCTACC TTGCTCTAGG CTCAAGAACT CATCCCTTTT 841 CTTATCCCTC AAAGTCCGGG GGATATACTT CTCCATAAAC AAACTATAGA ATGAGGCCCA 901 AGTCATAGGT GATGCCTCTA TTGGTTGACA CTCGATATGT GACCGCCACC ACATTTGGGC 961 GTTCCCTTGA AACTGATAAG TCACAAACTC CACACCAAAC CGTTCTACTA TACCCATCTT 1021 GTGTAGTAGC TCGTGACAGT CAACCAGAAA ATCATAAGCA TCCTCCGATT CAGCACCCTT 1081 GAAGACCGGA GGTTTCAATT TCAAGAACTT ACTGAAAAGT TCATGCTGAT CATTTGTCAT 1141 TATAGGGACA GTAGTCAAAC GTGGAAATGT GCCTATGTCC AATGGAACAT CCATGCGGGG 1201 AGCCATAGTA GCCGCATGTT GTACTTCTGA AACCGGAGGT GTTGGCGCAG AAAACACTGG 1261 AGGTGCTTGA CCTTGATCAG ATAACCCGCT AAGATAAGCC AGAACCTGAT TGATCATCTC 1321 TGGGGTAGGT TGGGGTGGCA TTTCCTCATT TTGCACTTGT TCAGTTTCCC CATCCCTCCC 1381 TTTCTCTATT ACTTCCTCAG TCAGTGGAAG AGTCACTGCC CTAGTATCAG ATGGGCT Predicted gene structure (within gDNA segment 60335 to 56593): Exon 1 59564 59130 ( 435 n); cDNA 1 434 ( 434 n); score: 0.851 Intron 1 59129 59095 ( 35 n); Pd: 0.000 (s: 0.82), Pa: 0.000 (s: 0.73) Exon 2 59094 58095 (1000 n); cDNA 435 1436 (1002 n); score: 0.848 MATCH C08HBa0294K15.1- SGN-U317064+ 0.849 1435 0.999 C PGS_C08HBa0294K15.1-_SGN-U317064+ (59564 59130,59094 58095) Alignment (genomic DNA sequence = upper lines): ACGAATAGGC ATGTCAAGCA ATTCACAATG TAAATTAAGA CCAGTAGCAA ATGAGGAAGA 59505 |||||||||| || ||||| | |||||||||| |||||| ||| ||| |||||| |||||||||| ACGAATAGGC ATATCAAGAA ATTCACAATG TAAATTTAGA CCATTAGCAA ATGAGGAAGA 60 TACATATGAA AATGTGGATC CAGGATCAAA TAATACAGAA GCCATGCAAT CACAAACCAA 59445 |||||| ||| || ||||||| |||||||||| ||||| ||| |||||||||| ||||||| | TACATAAGAA AACGTGGATC CAGGATCAAA CAATACGGAA GCCATGCAAT CACAAACTAG 120 AAGATTACCT GTGATAACAA CATCAGATGT CTCCGCTTCA GACCTCCCAG GGAAAGCATA 59385 |||||||||| ||||| ||| ||||||||| |||||||||| |||| ||||| ||||||| || AAGATTACCT GTGATGACAG CATCAGATGC CTCCGCTTCA GACCGCCCAG GGAAAGCGTA 180 ACAATGGGCC CTATCACCTG TCTATCCGTT GCCCCTACCA TGTTGTGCTG CAGTCGCTCC 59325 |||||||||| ||||| || ||| || || |||||||||| ||||||| || ||| || || ACAATGGGCC CTATCGTTTG TCTGCCCATT GCCCCTACCA TGTTGTGATG TAGTGGCCCC 240 GGCTTGTCCG CCACCCCGGT TGATTTGTGT GACCACCATT ACCTCGGCCA CCATGTTCTC 59265 | ||| || ||| | | | |||| || |||||||||| |||||| ||| ||| || ||| AGTTTGCCCA TTACCTCTGC CGTTTTG-GT GACCACCATT ACCTCGACCA CCACGTCCTC 299 CAGAATAGCG GCCTCTTCCA TGACCACCTC TACCCCTGAC TATTGAAGGT CTGTAACTCT 59205 ||||||| || |||||| ||| |||||||||| |||| || | ||||| ||| || ||||| CAGAATAACG GCCTCTACCA TGACCACCTC TACCTCTAGC TATTGGGGGT CTATAACTTG 359 GTTTTGGACA ATATCTCTTA ATATGTCCAA TTTCCCCACA TCCATAACAC TCTCTGGGTT 59145 || ||||| || | || || |||||||||| | |||||||| ||||||||| ||||||| | GTCCGGGACA ATTTATCCTA ATATGTCCAA TCTCCCCACA TCCATAACAT TCTCTGGAGT 419 CGAGCATAGG TCTCTGTGAG AACGACGGAG TCTGGGGATA ACCTCCAAAC TCAGAGAAAT 59085 | |||||| | || | ||||| | CACTCATAGG CCCCT..... .......... .......... .......... T-GGAGAAGT 443 GTTGACCGGT CTG---TGGA CCCCCAGCTA CAGCCTGTAG TGAAGACTGA ATAGGTCGGG 59028 |||||||||| ||| |||| |||||| ||| ||| |||||| |||||||||| || ||||| | GTTGACCGGT CTGAGGTGGA CCCCCAACTA CAGTCTGTAG TGAAGACTGA ATGGGTCGAG 503 CTGGATACCC TCCTGAACTC TGCCCTCTGG AGTAAGAACT ACTAAACTCA CCTCCCTTAC 58968 ||| || || ||| |||| || ||||| | ||||||||| |||||||| |||||||| | CTGAGTAACC TCCGGAACCT TGTCCTCTAG AGTAAGAACC CTTAAACTCA CCTCCCTTTC 563 GAAACTTCTT AGTTGTTGAT GCCATGGTGA AATCATCTGG CTTCACTCCC TCCACCTCTA 58908 ||||| |||| | ||| ||| | | |||||| | || ||||| ||||||||| ||||| |||| GAAACCTCTT TGATGTCGAT GTCGTGGTGA AGTCGTCTGG CTTCACTCCT TCCACTTCTA 623 TCACAAAGTC TACCACTTCC TAAAAGGATT TTGCTGCAGT AGATACCTGT AAGGCTGGAA 58848 |||||||||| ||||||||| | ||||||| |||| | | | ||||||| |||| | || TCACAAAGTC TACCACTTCT TGGAAGGATT TTGCCGTTGC CGCTACCTGT AAGGACGAAA 683 TCTGCAAATC TGACCTCAAT CCCTTCACAA AATGGCGAAT CCGCTCTTGT GGACTGAAGC 58788 || |||| || ||||||||| |||||||||| | ||||||| ||||||||| |||||||| | TCCGCAATTC TGACCTCAAC CCCTTCACAA ACCGGCGAAT CCGCTCTTGA GGACTGAAAC 743 AAAGCTGGGT GGCATACCTA GATAATGCAC GACACTTAGC CTCATACGCA GTAACCGACA 58728 | || || || |||||| || |||| ||||| || ||||||| |||||| ||| |||| |||| AGAGTTGAGT GGCATATCTG GATAGTGCAC GAAACTTAGC CTCATAAGCA TTAACTGACA 803 TCCTGCCTTG CTCTAGGCTC AAGAACTCAT CTCTACTCCT ATCCCTCTAA GTCCGGGGTA 58668 ||| ||||| |||||||||| |||||||||| | || || | ||||||| || |||||||| | CCCTACCTTG CTCTAGGCTC AAGAACTCAT CCCTTTTCTT ATCCCTCAAA GTCCGGGGGA 863 TATACTTCTC CATAAACAAG CTAGAGAATG ATGCCCAAGT CATAGGCGGT GCCTGTGCTG 58608 |||||||||| ||||||||| ||| |||||| | |||||||| |||||| | | |||| | || TATACTTCTC CATAAACAAA CTATAGAATG AGGCCCAAGT CATAGGTGAT GCCTCTATTG 923 GTTGACACTC GACATACGAT CGCCACCACA TTTTGGAATT TCCCTGAAAC TTATAGGTTA 58548 |||||||||| || || || |||||||||| ||| || || || |||||| | ||| || | GTTGACACTC GATATGTGAC CGCCACCACA TTTGGGCGTT CCCTTGAAAC TGATAAGTCA 983 CAAACTCAAC ACCGAATCGT TCCACTATGC CCATCTTATG TAGAAACTCA TGACAATCAA 58488 ||||||| || ||| || ||| || ||||| | ||||||| || ||| | ||| ||||| |||| CAAACTCCAC ACCAAACCGT TCTACTATAC CCATCTTGTG TAGTAGCTCG TGACAGTCAA 1043 CCACAAAATC ATAGGCATCC TCAGATTCAG CACCCTTGAA GACTGGAGGT TTCAATTTCA 58428 ||| |||||| ||| |||||| || ||||||| |||||||||| ||| |||||| |||||||||| CCAGAAAATC ATAAGCATCC TCCGATTCAG CACCCTTGAA GACCGGAGGT TTCAATTTCA 1103 AGAACTTATT GAAAAGTTCG TGCTGATCAC TTGTCATTAT AGGTCCTGTA GTCAATCGAG 58368 |||||||| | ||||||||| ||||||||| |||||||||| ||| | ||| ||||| || | AGAACTTACT GAAAAGTTCA TGCTGATCAT TTGTCATTAT AGGGACAGTA GTCAAACGTG 1163 GAAACGTGCC TATTTCCAAT GAGGCATCCA TGCGGGGAGC CATAGCAGCT GCATGTTGTA 58308 |||| ||||| ||| |||||| | |||||| |||||||||| ||||| ||| |||||||||| GAAATGTGCC TATGTCCAAT GGAACATCCA TGCGGGGAGC CATAGTAGCC GCATGTTGTA 1223 CTCCCGAAAC CTGAGGCGTT GGTGCAGAAA ACACTGGAGG TGTCTGGCCT TGATCAGATA 58248 || | ||||| | |||| ||| || ||||||| |||||||||| || || ||| |||||||||| CTTCTGAAAC CGGAGGTGTT GGCGCAGAAA ACACTGGAGG TGCTTGACCT TGATCAGATA 1283 ACCCGCTAAG ATAAGCAAGA ACCTGGTTAA TCATCTCTGG GGTAGGTTGG GGTGGTAATT 58188 |||||||||| |||||| ||| ||||| || | |||||||||| |||||||||| ||||| | || ACCCGCTAAG ATAAGCCAGA ACCTGATTGA TCATCTCTGG GGTAGGTTGG GGTGGCATTT 1343 CCTCATTCTG CACTTGTTCA TCCTCCCCTT CCTCACCCTC TCT-TACTAC TTCCTCAGTC 58129 ||||||| || |||||||||| ||||| | || | |||| ||| || ||| |||||||||| CCTCATTTTG CACTTGTTCA GTTTCCCCAT CC-CTCCCTT TCTCTATTAC TTCCTCAGTC 1402 GGTGGAGGAG TCACCGCCCT AGTACTAGAT GGGC 58095 ||||| ||| |||| ||||| |||| |||| |||| AGTGGAAGAG TCACTGCCCT AGTATCAGAT GGGC 1436 hqPGS_C08HBa0294K15.1-_SGN-U317064+ (59564 59130,59094 58095) ******************************************************************************** EST sequence 35 -strand 888 n (File: SGN-U315286-) 1 GTCGTTGCTC TAGTTCTACC CATCTGGCAA GAGAGTGAGN ATGGTCAGAT ACCAATTCGT 61 ATCGCTTAGA TACCAATTGA CTCGAAGTAG TAGCACGAAA GAAAGAATGA AAGAGTGAAG 121 TTTTCCTAAA GTCTTATAGC CTCTCAAGGA AAAGTAAAAG CGTCCCCCTA CCGTTCCTTA 181 AGACTCTACT AGACTTGTTC TTGTGTGATG AGACCAACGA ACCTAATGCT CTGATACCAA 241 GTTTTGTCAC GACCCAAATC CGGGCCGCCA CTGGCACCCA CACTTACCCT CCTATGTGAG 301 CGAACCAACC AATCTAAACC TTAACATTTC AATGTAATAG CAACAGAAAG TAATGCGGAA 361 GACTTAAACT CATTAATAAA ATCAATAACT ACTATTATTA AACATCTATT ATTCCCAAAA 421 CCTGGAAGTC ATCATCACAA GAACATCTAC TTTAAACTAC TAATTCTAAG AGTTTCTAAG 481 AAGCTAAAAA ATTACATAAG AAGCTAGTCC ATGCCGGAAG TTCAAGGCAT CAAGACATGA 541 AGGAGAAGAT CCAGTCCAAG CTAGAAGCGT TAGCTCACCC TGAAGATCCG GTGTGACGAA 601 GACTGGCTTG AGTTACTGTT GAGTCGAAGA TGACGGCACG TTTGCTGCAC TCCACAAATA 661 ACAAGAAGAA AAACATAAAA GTAGGGGTCA GTACAAAACA CGGCTACTGA GTAGATATCA 721 TCGGCCAACT CAAAATAGGG AACAGTATGT ATTAAGCAAT ATCATAAAAT CAACTAATAT 781 CCTTAACATG CAGCATTTAT AGTTACCATA ACCCTTGGTT ACAACACCAA GCACATCAAT 841 GAGGACTCAC ACCTCCTCAT CATACTCATT TGGGAATTTA GTTCATTA Predicted gene structure (within gDNA segment 59650 to 54742): Exon 1 57957 57071 ( 887 n); cDNA 1 888 ( 888 n); score: 0.806 MATCH C08HBa0294K15.1- SGN-U315286- 0.806 887 0.999 C PGS_C08HBa0294K15.1-_SGN-U315286- (57957 57071) Alignment (genomic DNA sequence = upper lines): GTTGTTGCTC TAGTTCTAAC CATCTGTGAA ATAGAGTGAA GATGGTCAGA TACCAATTTG 57898 || ||||||| |||||||| | |||||| | | | ||||||| ||||||||| |||||||| | GTCGTTGCTC TAGTTCTACC CATCTG-GCA AGAGAGTGAG NATGGTCAGA TACCAATTCG 59 TATCACCTAG ATACCAATTG GATCCAAGTA AAAGCACGAA AGAAGGAAAG AATG---GAA 57841 |||| | ||| |||||||||| || ||||| |||||||| |||| ||| | || | ||| TATCGCTTAG ATACCAATTG ACTCGAAGTA GTAGCACGAA AGAAAGAATG AAAGAGTGAA 119 -TTTTCCTAA AGTCTTATAG CCTCTCAAAG AAAAGTAAAG GCGTCCCCCT ACCGTTCCTC 57782 ||||||||| |||||||||| |||||||| | ||||||||| |||||||||| ||||||||| GTTTTCCTAA AGTCTTATAG CCTCTCAAGG AAAAGTAAAA GCGTCCCCCT ACCGTTCCTT 179 AAGACTCTAC TAGACTTGTT CTTGTGTGAT GAGACCAACG AACCTAATGC TCTGATACCA 57722 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGACTCTAC TAGACTTGTT CTTGTGTGAT GAGACCAACG AACCTAATGC TCTGATACCA 239 AG-TTTGTCA CGACCCAAA- ACGGGCCGCG AGTGGCACCC ACTCTTACCC TCCTATGTGA 57664 || ||||||| ||||||||| |||||||| | |||||||| || ||||||| |||||||||| AGTTTTGTCA CGACCCAAAT CCGGGCCGCC ACTGGCACCC ACACTTACCC TCCTATGTGA 299 GAGAACCAAC CAATCTAAAC CCCAACAATT CAACGATAAT A--AATAGAA TATAATGCGG 57606 | |||||||| |||||||||| | |||| || ||| | |||| | || |||| |||||||| GCGAACCAAC CAATCTAAAC CTTAACATTT CAATG-TAAT AGCAACAGAA AGTAATGCGG 358 AAGAATTAAA ACTCATTAAC GAAATCAATA ATTAACTTCT AAAACTCAAA ACTTATCATT 57546 |||| || || ||||||||| ||||| | | ||||| || | | | || || | | ||| AAGACTT-AA ACTCATTAAT AAAATC---A A-TAACTACT ATTA-T-TAA ACATCT-ATT 410 ATCCCCAAAA TCTGGAAGTC ATCATCACAA GAACATCTAT CCTCAAATTA CTAAATCTAA 57486 || ||||||| ||||||||| |||||||||| ||||||||| | | ||| || |||| ||||| ATTCCCAAAA CCTGGAAGTC ATCATCACAA GAACATCTA- CTTTAAACTA CTAATTCTAA 469 GAGTATCTAA GAAGCTAAAA TAAGTA-A-A AG-AGATAGT CCATGTCCGA ACTTCAAGAC 57429 |||| ||||| |||||||||| || || | | || || |||| ||||| | || | |||||| | GAGTTTCTAA GAAGCTAAAA -AATTACATA AGAAGCTAGT CCATGCCGGA AGTTCAAGGC 528 ATCAAGACGC GAAGGAAAGA ATCCAGTCCG AGCTAGGAAC AATATCTCAC CCTGAA-ATC 57370 |||||||| |||||| | ||||||||| |||||| | | || ||||| |||||| ||| ATCAAGACAT GAAGGAGAAG ATCCAGTCCA AGCTAGAAGC GTTAGCTCAC CCTGAAGATC 588 TGATTATGCT GAAGTCTGGC TAGAGTTGCG GTTGAGTCAA AGTCGATGGC ACGTTTGCTG 57310 | | || |||| ||||| | ||||| | |||||||| | || || ||| |||||||||| CG-GTGTGAC GAAGACTGGC TTGAGTTACT GTTGAGTCGA AGATGACGGC ACGTTTGCTG 647 CACTCCACAA ATAACAAGAA -AGAAACATA CAAGTAGGGG TCAGTACAAG GCACAAGTAC 57251 |||||||||| |||||||||| | ||||||| ||||||||| ||||||||| ||| ||| CACTCCACAA ATAACAAGAA GAAAAACATA AAAGTAGGGG TCAGTACAAA ACACGGCTAC 707 TGAGTAGGTA TCATCGGCCA ACTCAAAATA GAAAACAACA TATATCATAT AATAACATAA 57191 ||||||| || |||||||||| |||||||||| | |||| | | ||| | |||| ||||| TGAGTAGATA TCATCGGCCA ACTCAAAATA GGGAACAGTA TGTATTAAGC AATATCATAA 767 AATCAACTAC AATACTCAAC AGACAACAAC AACAAGTACC ATAACCATTG GCCACAAC-C 57132 ||||||||| || || ||| | || || | | |||| |||||| ||| | ||||| | AATCAACTAA TATCCTTAAC ATGCAGCATT TATAGTTACC ATAACCCTTG GTTACAACAC 827 CAAGCGCATC TATGAGGACT CACTCCTCCA CACCATACTC GTTTGGAAAA TAGTTTCTTT 57072 ||||| |||| ||||||||| ||| ||||| || ||||||| ||||| || | ||| || CAAGCACATC AATGAGGACT CACACCTCCT CATCATACTC ATTTGGGAAT TTAGTTCATT 887 A 57071 | A 888 hqPGS_C08HBa0294K15.1-_SGN-U315286- (57957 57071) ******************************************************************************** EST sequence 15 +strand 1490 n (File: SGN-U335075+) 1 NGCCATGGGG NNGGGCAGAG ATGTATGACT CCTATGGGCG AATGGCGGCA AATCGGCCGA 61 ATTGATCGTC CCTCTCTCTC TGTCATCGTC CCTCTCTCTC TCATCATTCC TCTCTACCAG 121 CATTCTCCAT CTCCTCTCTC CGCCGTCATC TTCTTCATCT TCATCTCCGC CGTCGTCTTC 181 TCCATTCTCC ATCTCCTCCG TCGTCTTCTC CATTCTCCAT CTCCTCTCTT CGCCGCCAGC 241 TCCATCTCTG CGCGCCATTT GCAGTCGGGC CTCAGCAGGT GGAGGTCGCG CCGCCTCCAT 301 CTCCGCCGAG TCGTGCAGCA GCAACAGTGG TCGACGTTCC CAACCCTTTG ACTCCAGCAA 361 ACGTGCCGTC ATCTTCAACT CAACCGCAAC TCTAGCCAGT CTTCATTACA CCAGATTTCA 421 GGGTGAGCTA ATGCTTCTAG CTTGGACTGG ATCTTCCTCT TCATGTCTTG ATGCCTTGAA 481 CTTCCGGCAT GGACTAGCTT TTTACTTATT CTAGATTCTT AGATACTCTT AGCTTATTTG 541 AGGATAGATG TTCTTGTGAT GATGACTTCC AGATTTTGGG AATAATGATA AGTTTGAGTT 601 TTAGAAGTTG ATTAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAACGNNCAA 661 AGGGGGCCCC TGGGAAAATT TGAAGGACCC CCAAAAAAAG CGGGGAAAAG GGGGGAAAAA 721 GGGGGCCCAA GGGGAAAATG GGGACACAAA AAAAAACCAA AAAANNNNNN NNNNNCNACA 781 AANNNTCCGG GGGGAAAANN ATTTCAACAA AAAAAANNNN NGNCCCCNAA TACCCCCAAA 841 AAAATAATAG CNCNANACAT CGTAANTTGA TTAAAGAAGG ACAATAATAC TCTATTACAT 901 TTAAATACAA CCTGAATAAG CACCACATAA AGAATATTAC AACCAATATT GTCATTCACC 961 ACCCTAATAA AGTATAAAGA AAACCGTAAA ATAAACATGA CAATTCAAAA GACGATCAAA 1021 AGTGCAAAAC CCAGAAATAT AGAGCGGAAA TCAATCGATT ATCTAGACAT ATACCTAACA 1081 CATAATGACA TGCCATTACA ACCTTTCTAC TATTAAAGTA ATACATACAC TACCAACGTC 1141 ATCCTAAAAG ATATAATTAA GATATTTAGA ACATATATTA GCGCAGCATA TATTATAATA 1201 AAAAGTACAA CGATAGCGAG TAAAAAGATA AAAATCTAAT CATTTACCAT CGGCAGCAGA 1261 CACGCCAATA AATAGATGAC ATACATATTT TATTAGGATA AAACTGTCCG TACTATAACG 1321 TACGAATATA CACATTAAAT TAAGTCACCT GAGGAACACT GTCAAACTAC GTGATATACC 1381 GATCCGAATC TCTAATATAT ACCATATGAA ACACATATAC ACGTAGTAAN ATAATATATA 1441 CTACTCAATA ATTAGCAACG AACACCCGAC TACTCTATTA TATATAATAA Predicted gene structure (within gDNA segment 52963 to 67592): Exon 1 57310 57576 ( 267 n); cDNA 355 613 ( 259 n); score: 0.852 Intron 1 57577 63379 (5803 n); Pd: 0.000 (s: 0.94), Pa: 0.953 (s: 0) Exon 2 63380 63394 ( 15 n); cDNA 614 628 ( 15 n); score: 0.667 Intron 2 63395 64887 (1493 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0) Exon 3 64888 64902 ( 15 n); cDNA 629 643 ( 15 n); score: 0.733 Intron 3 64903 67529 (2627 n); Pd: 0.732 (s: 0), Pa: 0.322 (s: 0) Exon 4 67530 67548 ( 19 n); cDNA 644 662 ( 19 n); score: 0.684 MATCH C08HBa0294K15.1+ SGN-U335075+ 0.852 316 0.212 C PGS_C08HBa0294K15.1+_SGN-U335075+ (57310 57576,63380 63394,64888 64902,67530 67548) Alignment (genomic DNA sequence = upper lines): CAGCAAACGT GCCATCGACT TTGACTCAAC CGCAACTCTA GCCAGACTTC AGCATAATCA 57369 |||||||||| ||| || || | ||||||| |||||||||| ||||| |||| | | | || CAGCAAACGT GCCGTCATCT TCAACTCAAC CGCAACTCTA GCCAGTCTTC ATTA-CACCA 413 GATTTCAGGG TGAGATATTG TTCCTAGCTC GGACTGGATT CTTTC-CTTC GCGTCTTGAT 57428 |||||||||| |||| || || | |||||| |||||||| | ||| | |||| |||||||| GATTTCAGGG TGAGCTAATG CTTCTAGCTT GGACTGGA-T CTTCCTCTTC ATGTCTTGAT 472 GTCTTGAAGT TCGGACATGG ACTATCTCTT TTACTTATTT TAGCTTCTTA GATACTCTTA 57488 | |||||| | || | ||||| |||| || || ||||||||| ||| |||||| |||||||||| GCCTTGAACT TCCGGCATGG ACTAGCT-TT TTACTTATTC TAGATTCTTA GATACTCTTA 531 GATTTAGTAA TTTGAGGATA GATGTTCTTG TGATGATGAC TTCCAGATTT TGGGGATAAT 57548 | | | | |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| G--CT--T-A TTTGAGGATA GATGTTCTTG TGATGATGAC TTCCAGATTT TGGGAATAAT 586 GATAAGTTTT GAGTTTTAGA AGTTAATTAT TGATTTCGTT AATGAGTTTT AATTCTTCCG 57608 |||||| ||| |||||||||| |||| ||| GATAAG-TTT GAGTTTTAGA AGTTGATT.. .......... .......... .......... 613 CATTATATTC TATTTATTAT CGTTGAATTG TTGGGGTTTA GATTGGTTGG TTCTCTCACA 57668 .......... .......... .......... .......... .......... .......... 613 TAGGAGGGTA AGAGTGGGTG CCACTCGCGG CCCGTTTTGG GTCGTGACAA ACTTGGTATC 57728 .......... .......... .......... .......... .......... .......... 613 AGAGCATTAG GTTCGTTGGT CTCATCACAC AAGAACAAGT CTAGTAGAGT CTTGAGGAAC 57788 .......... .......... .......... .......... .......... .......... 613 GGTAGGGGGA CGCCTTTACT TTTCTTTGAG AGGCTATAAG ACTTTAGGAA AATTCCATTC 57848 .......... .......... .......... .......... .......... .......... 613 TTTCCTTCTT TCGTGCTTTT ACTTGGATCC AATTGGTATC TAGGTGATAC AAATTGGTAT 57908 .......... .......... .......... .......... .......... .......... 613 CTGACCATCT TCACTCTATT TCACAGATGG TTAGAACTAG AGCAACAACT GCGCCAACAC 57968 .......... .......... .......... .......... .......... .......... 613 CAACACCGGC AAGACAAGAT GCGTCTGAGC CAGCCACTGG GGTTGTAGCT CGAAGATGAG 58028 .......... .......... .......... .......... .......... .......... 613 CAGTGGCAAG AGGCCGTGGT AGAGGTCGCG GGAGGACGTC CTCTAGAGGA AGAGGACAAG 58088 .......... .......... .......... .......... .......... .......... 613 CACCTGGCCC ATCTAGTACT AGGGCGGTGA CTCCTCCACC GACTGAGGAA GTAGTAAGAG 58148 .......... .......... .......... .......... .......... .......... 613 AGGGTGAGGA AGGGGAGGAT GAACAAGTGC AGAATGAGGA ATTACCACCC CAACCTACCC 58208 .......... .......... .......... .......... .......... .......... 613 CAGAGATGAT TAACCAGGTT CTTGCTTATC TTAGCGGGTT ATCTGATCAA GGCCAGACAC 58268 .......... .......... .......... .......... .......... .......... 613 CTCCAGTGTT TTCTGCACCA ACGCCTCAGG TTTCGGGAGT ACAACATGCA GCTGCTATGG 58328 .......... .......... .......... .......... .......... .......... 613 CTCCCCGCAT GGATGCCTCA TTGGAAATAG GCACGTTTCC TCGATTGACT ACAGGACCTA 58388 .......... .......... .......... .......... .......... .......... 613 TAATGACAAG TGATCAGCAC GAACTTTTCA ATAAGTTCTT GAAATTGAAA CCTCCAGTCT 58448 .......... .......... .......... .......... .......... .......... 613 TCAAGGGTGC TGAATCTGAG GATGCCTATG ATTTTGTGGT TGATTGTCAT GAGTTTCTAC 58508 .......... .......... .......... .......... .......... .......... 613 ATAAGATGGG CATAGTGGAA CGATTCGGTG TTGAGTTTGT AACCTATAAG TTTCAGGGAA 58568 .......... .......... .......... .......... .......... .......... 613 ATTCCAAAAT GTGGTGGCGA TCGTATGTCG AGTGTCAACC AGCACAGGCA CCGCCTATGA 58628 .......... .......... .......... .......... .......... .......... 613 CTTGGGCATC ATTCTCTAGC TTGTTTATGG AGAAGTATAT ACCCCGGACT TAGAGGGATA 58688 .......... .......... .......... .......... .......... .......... 613 GGAGTAGAGA TGAGTTCTTG AGCCTAGAGC AAGGCAGGAT GTCGGTTACT GCGTATGAGG 58748 .......... .......... .......... .......... .......... .......... 613 CTAAGTGTCG TGCATTATCT AGGTATGCCA CCCAGCTTTG CTTCAGTCCA CAAGAGCGGA 58808 .......... .......... .......... .......... .......... .......... 613 TTCGCCATTT TGTGAAGGGA TTGAGGTCAG ATTTGCAGAT TCCAGCCTTA CAGGTATCTA 58868 .......... .......... .......... .......... .......... .......... 613 CTGCAGCAAA ATCCTTTTAG GAAGTGGTAG ACTTTGTGAT AGAGGTGGAG GGAGTGAAGC 58928 .......... .......... .......... .......... .......... .......... 613 CAGATGATTT CACCATGGCA TCAACAACTA AGAAGTTTCG TAAGGGAGGT GAGTTTAGTA 58988 .......... .......... .......... .......... .......... .......... 613 GTTCTTACTC CAGAGGGCAG AGTTCAGGAG GGTATCCAGC CCGACCTATT CAGTCTTCAC 59048 .......... .......... .......... .......... .......... .......... 613 TACAGGCTGT AGCTGGGGGT CCACAGACCG GTCAACATTT CTCTGAGTTT GGAGGTTATC 59108 .......... .......... .......... .......... .......... .......... 613 CCCAGACTCC GTCGTTCTCA CAGAGACCTA TGCTCGAACC CAGAGAGTGT TATGGATGTG 59168 .......... .......... .......... .......... .......... .......... 613 GGGAAATTGG ACATATTAAG AGATATTGTC CAAAACAGAG TTACAGACCT TCAATAGTCA 59228 .......... .......... .......... .......... .......... .......... 613 GGGGTAGAGG TGGTCATGGA AGAGGCCGCT ATTCTGGAGA ACATGGTGGC CGAGGTAATG 59288 .......... .......... .......... .......... .......... .......... 613 GTGGTCACAC AAATCAACCG GGGTGGCGGA CAAGCCGGAG CGACTGCAGC ACAACATGGT 59348 .......... .......... .......... .......... .......... .......... 613 AGGGGCAACG GATAGACAGG TGATAGGGCC CATTGTTATG CTTTCCCTGG GAGGTCTGAA 59408 .......... .......... .......... .......... .......... .......... 613 GCGGAGACAT CTGATGTTGT TATCACAGGT AATCTTTTGG TTTGTGATTG CATGGCTTCT 59468 .......... .......... .......... .......... .......... .......... 613 GTATTATTTG ATCCTGGATC CACATTTTCA TATGTATCTT CCTCATTTGC TACTGGTCTT 59528 .......... .......... .......... .......... .......... .......... 613 AATTTACATT GTGAATTGCT TGACATGCCT ATTCGTGTTT CTACTCCGGT GGGTGAGTCT 59588 .......... .......... .......... .......... .......... .......... 613 GTGATAGTTG AAAAGGTGTA TAGGTCTTGT CTTGTGACTT TTATGGGGAG TAATACTCAT 59648 .......... .......... .......... .......... .......... .......... 613 GTAGACTTGG TTATCTTAGA AATGGTTGAT TTCGATGTAA TTCTGGGTAT GACTTGGCTT 59708 .......... .......... .......... .......... .......... .......... 613 TCTCCAAACT TTGCAATCTT AGACTGTAAT GCCAAAACTG TGACATTGGC CAAGCCTGAG 59768 .......... .......... .......... .......... .......... .......... 613 ACAGATCCGT TAGTGTGGGA GGGTGACTAC ACTCCCACTC CAGTTCGTAT CATCTCATTT 59828 .......... .......... .......... .......... .......... .......... 613 CTTCGTGCTA AGAGAATGGT TAGTAAAGGG TGTTTAGCTT TCTTGGCACA CCTCAGGGAT 59888 .......... .......... .......... .......... .......... .......... 613 GATACTACCC AAGTACCTTC AATTGAGTCG GTTTCGATAG TCCGTGAGTT TTTGGATGTG 59948 .......... .......... .......... .......... .......... .......... 613 TTTCCTGCAG ACCTTTCTGG TATGCCACCA GATAGAGATA TTGATTTCTG TATTGATCTG 60008 .......... .......... .......... .......... .......... .......... 613 GAGCCGGGTA CTCGCCCCAT TTCCATACCC CCTTATAGAA TGGCTCCCGC TGAGTTAAGA 60068 .......... .......... .......... .......... .......... .......... 613 GAGTTAAAGG CCCAACTTCA AGAGTTGTTA GGGAAAGGTT TTATTAGACC AAGTGCATCC 60128 .......... .......... .......... .......... .......... .......... 613 CCTTGGGGTA CTCCTGTTTT GTTTGTGAAG AAGAAGGATG GAAGTTTTCG GATGTGCATT 60188 .......... .......... .......... .......... .......... .......... 613 GACTACAGAC AACTGAATAA GGTAACTGTT AAGAACAAGT ATCCTCTTCC TCACATCGAT 60248 .......... .......... .......... .......... .......... .......... 613 GATTTGTTCG ATCAGTTACA AGGTGCTTGT ACCTTCTCAA AAATTGATTT GAGATCTGGT 60308 .......... .......... .......... .......... .......... .......... 613 TATCATCAAT TGAAAATATG GGCAACGAAT GTGCCCAAGA CTGCTTTTCG AACAAGATAT 60368 .......... .......... .......... .......... .......... .......... 613 GGGTATTACG AGTTCTTAGT AATGTCTTTT GGGCTTACGA ATGCCCCTGC TGCGTTCATG 60428 .......... .......... .......... .......... .......... .......... 613 AGCTTGATGA ACGGAATCTT TAATCCATAT CTAGATCTCT TTGTCATTGT ATTCGTTGAT 60488 .......... .......... .......... .......... .......... .......... 613 GATATACTGG TATACTCAAA GAGCAAGAAA GAACATGAGG AGCACTTGAG AATGGTATTG 60548 .......... .......... .......... .......... .......... .......... 613 GAAATGTTGA GGGAGAAAAA GCTTAATGCC AAATTCTCCA AGTGTGAGTT TTGGCTAGAT 60608 .......... .......... .......... .......... .......... .......... 613 TCAGTGTCCT TCTTGGGGCA TGTGGTTTCT AAGGATGGAG TGATTGTGGA TCCTTCTAAG 60668 .......... .......... .......... .......... .......... .......... 613 ATCGAAGCAG TGAAGAGTTG GGAAAGACCT ACTAATGTTA CAGAGGTAAG TAGCTTTGTT 60728 .......... .......... .......... .......... .......... .......... 613 GGTTTAGCTA GCTACTACCA TCGATTTATC GAGGGATTTT CTTCTGTTGC TTCCCAATTG 60788 .......... .......... .......... .......... .......... .......... 613 ACAAACTTAA CTAAGCAGAG TGTCCCATTT GTATGGTCAG ACGAGTGTGA AGAAAGCTTT 60848 .......... .......... .......... .......... .......... .......... 613 CAGAAACTCA AGACCTTGTT GACTACCGCA CCAATTCTTA CCCTGCCAGT GGAAGGTAAG 60908 .......... .......... .......... .......... .......... .......... 613 AATTTCATTA TTTATTATGA TGAATCCTAT TCGGGTTTGG GTGCAGTGCT AATGCAAGAG 60968 .......... .......... .......... .......... .......... .......... 613 AAGAATGTAA TTGCTTATGC TTCGAGACAA TTAAAGGTGC ATGAACGTAA TTATCCGACC 61028 .......... .......... .......... .......... .......... .......... 613 CATGATTGGG AGTTGGCTGC GGTAGTGTTT GCATTAAAGC AATAGAGACA TTATCTATAT 61088 .......... .......... .......... .......... .......... .......... 613 GGGGTTAAGT GTGAAGTCTA TACGGATCAT CGTAGTTTAC TGTATGTCTT TACTTAGAAA 61148 .......... .......... .......... .......... .......... .......... 613 GATTTGAATT TGAGACAGAG AAGGTGGATG GAACTACTGA AGGACTATGA TATCACTATT 61208 .......... .......... .......... .......... .......... .......... 613 TTGTATCATC CGGGAAAAGC TAATGTTGTG GCAGATGCTT TAAGTAGAAA GGCAGGGAGC 61268 .......... .......... .......... .......... .......... .......... 613 ATGGGAAGTC TAGCCCACTT GCAGGTTTCT AGACGCCCAT TGGCTAGAGA GGTTCAGACT 61328 .......... .......... .......... .......... .......... .......... 613 CTGGCTAATG ACTTTATGAG GCTAGAAGTA AATGGGAAGG GAGGATTTTT GGCCTGTGTG 61388 .......... .......... .......... .......... .......... .......... 613 GAGGCAAGAT CTTCCTTTCT TGATAAGATT AAAGGAAAAC AGTTTACCGA TGAGAAACTG 61448 .......... .......... .......... .......... .......... .......... 613 ATCCGGATCC GAGATAAGGT GTTGCGAGGA GAGGCTAAAG AAGCAAAAAT CGATGAGGAA 61508 .......... .......... .......... .......... .......... .......... 613 GGTGTTTTGA GAATTAAGGG AAGGGTATGT GTACCCCGTG TCGATGATTT GATTCACACT 61568 .......... .......... .......... .......... .......... .......... 613 ATTCTTACAA AGGCTCATAG TTCAAGGTAT TCTATACATC CTGGTGCAAC CAAGATGTAT 61628 .......... .......... .......... .......... .......... .......... 613 CGTGATCTAA AGCAACATTT TTTGTGGAGT AGGATGAAGC GTGACATTGT TGATTTTGTT 61688 .......... .......... .......... .......... .......... .......... 613 GCTCAATGCC CGAATTGTCA GCAAGTAAAG TATGAACACC AGAGGCCTGG AGGGACACTT 61748 .......... .......... .......... .......... .......... .......... 613 CAGAGAATGT CCATTCCTGA ATGGAAGTGG GAGAGAATTG CAATGGACTT CGTGGTTGGT 61808 .......... .......... .......... .......... .......... .......... 613 CTTCCAAAGA CAATGGGTAA GTATGACTCC ATTTGGGTAA TTGTTGACAA ATTAACTAAG 61868 .......... .......... .......... .......... .......... .......... 613 TCTGCTCATT TCATTCCGGT CAAGGTGACT TATAATGCAG AGAAGTTGGC CAAACTTTAC 61928 .......... .......... .......... .......... .......... .......... 613 ATCTCAGAAA TTGTTCGATT GCATGGAGTT CCACTTTCCA TTATATCAAA TAGGGGTACG 61988 .......... .......... .......... .......... .......... .......... 613 CAGTTTACTT CTATGTTTTG GAAAACATTG CATGCTGAAT TAGGTACTAC GTTGGATCTT 62048 .......... .......... .......... .......... .......... .......... 613 AGTACTGCAT TTCACCCTCA GACTGATGGT CAGTCTGAGC GAACGATTCA GGTTTTGGAG 62108 .......... .......... .......... .......... .......... .......... 613 GATATGCTTC GTGCATGTGT GATAGAGTTT GGTGGTCATT GGGATAACTT CTTACTCTTA 62168 .......... .......... .......... .......... .......... .......... 613 GCAGAGTTCT CATACAACAT TAGCTATCAC TCAAGTATTG ATATGGCCCC ATTTGAGGCA 62228 .......... .......... .......... .......... .......... .......... 613 CTGTATGGGA GAAGATGTAG GTCTCCCATT GGGTGGTTTG ATGCATTTGA GGTTAGACCT 62288 .......... .......... .......... .......... .......... .......... 613 TGGGGTACTT ACCTTCTGAG GGAATCATTA AATAAAGTGA AATGCATACA AGAAAAGCTT 62348 .......... .......... .......... .......... .......... .......... 613 TTAGCGGCTC AAAGTAGACA GGAAGAATAT GCAGATCGAA AGGTTAGAGA CTTGGAGTTT 62408 .......... .......... .......... .......... .......... .......... 613 ATCGAGGGTG AACAAGTCTT GCTGAAGGTT TCACCCATGA AAGGGGTGAT GCGGTTCGGT 62468 .......... .......... .......... .......... .......... .......... 613 AAGCGAGGTA AGCTTAGTCC GAGGTACATT GGTCCATTTG AAGTTCTGAA GCGCGTGGGG 62528 .......... .......... .......... .......... .......... .......... 613 GAGGTAGCTT ATGAATTAGC CTTGCCCCCA GGACTCTCAG GAGTGCACCT GGTATTTCAT 62588 .......... .......... .......... .......... .......... .......... 613 GTGTCTATGT TGAAAAGATA CCACGGGGAT GGAAACTACA TCATTCATTG GGATTCAGTT 62648 .......... .......... .......... .......... .......... .......... 613 CTTCTTGATG AGAATTTATC TTATGAGGAG GAGTCTGTTG CTATTTTAGA TAGAGAAGTC 62708 .......... .......... .......... .......... .......... .......... 613 CGCAAGTTGA GGTCAAGGGA GATTGCATCC ATCAAGGTTC AATGGAAGAA TCGACCAATT 62768 .......... .......... .......... .......... .......... .......... 613 GAAAAGTCCA CTTGGGAGAA GGAGGCTGAT ATGCAAGAAA AATACCCACA CCTGTTTACA 62828 .......... .......... .......... .......... .......... .......... 613 GATTCAGGTA CTCCTTTTCG CCCTTGTTTT TCTTCTTGTG ATCGTTCGGG GACAAACGAT 62888 .......... .......... .......... .......... .......... .......... 613 GGGTAAATTG GTATCTATTG TAACGACCTG TTAGTCGTTT TGAGCAGTAG AGTTTATTCT 62948 .......... .......... .......... .......... .......... .......... 613 AGTAATAGTT GTCTGGGTCG ACGGATCCCA CGACGGACCG TCGAAGGGGT CTCGTTCCAA 63008 .......... .......... .......... .......... .......... .......... 613 AACACTTAGA TTCTAAAATT TTGGGTACTG AGAACAACTA TCTGAACTTC GCGACGACAT 63068 .......... .......... .......... .......... .......... .......... 613 GGCAGGACGG ACCGTCGTGG GCACGATGGA CCGTCACAGA CCCTTTAATG AAATTCAGTC 63128 .......... .......... .......... .......... .......... .......... 613 TCTGAACTTT GTGACGGAAG CAGCAGGACG GACCGTCGCA GGCACGACGG GCCGTCACAG 63188 .......... .......... .......... .......... .......... .......... 613 GCTGCGTAAC CCTGACTGAG TCGGATTTCT GTTAAATGTT TTAAGGGGCG TTTTGGACTA 63248 .......... .......... .......... .......... .......... .......... 613 TTCCTGCTTA TAATTGTAAA GTTAGTGGGT TAATGTTAAT AATTCAATTA CTTGGGGGTT 63308 .......... .......... .......... .......... .......... .......... 613 AAAGGTGATA ACCTTGAAAT AAATAGTGGG TTACTTTTAC CATCTTTTAT ACTTAATTAT 63368 .......... .......... .......... .......... .......... .......... 613 ATGGTAATTA GGGTAAAAGA AAAAGAGTTT GAATAAGGAA AAATAGAAAG AACAGAAGAG 63428 |||| | |||| | .......... .AAAAAAAAA AAAAAA.... .......... .......... .......... 628 AGGGACGAAC GAGCGAGAGA AGATAGAACG AAGAGGAAAG CAAAGACCTT GAAGAGTAGC 63488 .......... .......... .......... .......... .......... .......... 628 TTGCGTGATC ACGAATTCTT CGATGGAAGT AGGTTATGGT TTATGTTATT TCATAGTAAA 63548 .......... .......... .......... .......... .......... .......... 628 CTCTTAATAG CGAATGATAT GTATTGGGTA GTATTGTAAA GTCTTCTATA TGCTTAATTG 63608 .......... .......... .......... .......... .......... .......... 628 TATGCTTGCA TGATGTGATT ATGTAAGTGT AATGAGTTGG AAAGATGAGG TTGTGAAGCT 63668 .......... .......... .......... .......... .......... .......... 628 TAAACCTAAA ACCCTCTGTG TTAATGATGA TGCCTTGGTA TAAAAGAAGG CTTGATGAAC 63728 .......... .......... .......... .......... .......... .......... 628 TAAAAGAATG AGGTTAGTGG ATCAGGTGTC ACGTTCCGAC ACCAGGATAG TAGTAGTGAA 63788 .......... .......... .......... .......... .......... .......... 628 TCGGGTGTCA CGTTCCGACA CTAGGATAGT AATAGTGGAT CGGGTCACGT TCCGACACCA 63848 .......... .......... .......... .......... .......... .......... 628 GGATAGTAAT AGTGGATCGG GTGTCACGTT CTGACACCAA GATACTAGTA ATGGATCGGG 63908 .......... .......... .......... .......... .......... .......... 628 TGTCACGTTC CGACACCAGG ATAGTAGTAA TGGATCGGGT ATCACGTTCC GACACCAGGA 63968 .......... .......... .......... .......... .......... .......... 628 TAGTAGTAGT GGATCGGGTG TCACGGTAGT AGTGGATCGG GTGTCACGTT CTGACACCAG 64028 .......... .......... .......... .......... .......... .......... 628 GATAGTAGTA GAGGATCGGA GTGTCACGTT CCGACACCAG GATAGTAAAA AGAATGAATC 64088 .......... .......... .......... .......... .......... .......... 628 TTGAATCATG TTAATATACT CAGGTTTAAA GAAACTATTT CCCAAACGAG TATGGTGTGG 64148 .......... .......... .......... .......... .......... .......... 628 AGGCGTGAGT ACTCATGGAT GCGCTTGGGT TGTGGCCAAT GGTTATGGTA CTTGTTGTTG 64208 .......... .......... .......... .......... .......... .......... 628 TTGTCTGTTG AGTATTGTAG TTGATTTTAT GTTATTATCT GATATATGTT ATTTTCTATT 64268 .......... .......... .......... .......... .......... .......... 628 TTGAGTTGGC CGATGATACC TACTCAGTAC TTGTGCCTTG TACTGACCCC TACTTGTATG 64328 .......... .......... .......... .......... .......... .......... 628 TTTCTTTCTT GTTATTTTTG GAGTGCAGCA AACGTGCCAT CGACTTCGAC TCAACCGCAA 64388 .......... .......... .......... .......... .......... .......... 628 CTCTAGCCAG ACTTCAGCAT AATCAGATTT CAGGGTGAGC TATTGTTCCT AGTTCGGACT 64448 .......... .......... .......... .......... .......... .......... 628 GGATTCTTTC CTTCGCGTCT TGATGTCTTG AAGTTCGGAC ATGGACCATC TCTTTTACTT 64508 .......... .......... .......... .......... .......... .......... 628 ATTTTAGCTT CTTAGATACT CTTAGATTTA GTAATTTGAG GATAGATGTT CTTGTGATGA 64568 .......... .......... .......... .......... .......... .......... 628 TGACTTCCAG ATTTTGGGGA TAATGATAAG TTTTGAGTTT TAGAAGTTAA TTGTTGATTT 64628 .......... .......... .......... .......... .......... .......... 628 CGTTAATGAG TTTTAAGTCT TCCGCATTAT ATTCTATTTA TTATCGTTGA ATTGTTTGGG 64688 .......... .......... .......... .......... .......... .......... 628 TTTAGATTGG TTTGTTCGCT CACATAGGAG GGTAAGTATG GGTGCCACTC GCGGCCTGTT 64748 .......... .......... .......... .......... .......... .......... 628 TTGGGTCGTG ACAGTAGGAA ATCAAACTCT AAGTCGAGGA CTTTCTACAC AAAATGGTAT 64808 .......... .......... .......... .......... .......... .......... 628 AAATATAATT ATTTAATTTA GTATCGGTTA ACCCGTTAAG AAAAAACTTC AAACCGTTAA 64868 .......... .......... .......... .......... .......... .......... 628 GAACCGATAA CCCGATAACA AAAAAATCAA AACCGTTATT AAAACCACTA AACTAATAAC 64928 | |||||| || || .......... .........A AAAAAAAAAA AAAA...... .......... .......... 643 CCAATACTAT AAACCAATAA CTTTTTTATC GATTCGGCTT ATCGGTTTCG ATTCGATTTT 64988 .......... .......... .......... .......... .......... .......... 643 GAACTGCCCT ATGGACGTGT ATCTAAATTT AATCAATTAA GTAGAAAAAT ATTTTTAAAG 65048 .......... .......... .......... .......... .......... .......... 643 GCATCAATAA TTTAAAACAA AACTAATAAT TTACTTTAAA TTTAGAAATA TTCTCAATAC 65108 .......... .......... .......... .......... .......... .......... 643 TTTCGCTCTT TTATAAATTT ATATAAATTA GAACAATAAA AAGATCCAGC CTTCAAATGG 65168 .......... .......... .......... .......... .......... .......... 643 CTGTCAATAT TCTTTTCAAA ATTCAAATTT ATCTATAAAT CTCTCTTATT TACTTCCCAC 65228 .......... .......... .......... .......... .......... .......... 643 AACGATCATC AGGTCCATAT CTATTCAATA TTCACACTTG CGTCAACATA ATGTCCACTT 65288 .......... .......... .......... .......... .......... .......... 643 CACATTCGTA GAAAATGATT GGCTATATAT AATAATTTAT AATTTAAGTT ACTTGACACC 65348 .......... .......... .......... .......... .......... .......... 643 ATAGAGCATG TGGACATTAT TCAATTTCAA TTTTGTACTT GTACTCTTTC CATTGACAAT 65408 .......... .......... .......... .......... .......... .......... 643 GATGATTTTT CACCTTCTTT TTTTTTAGAA ATTATATTTA GAAATTATAT TTGTATGTTA 65468 .......... .......... .......... .......... .......... .......... 643 TAGTTATAAT TTACATAATT ATACTTATGA CAAATTTTAT GTTTGTTATG GAGCTTTTGA 65528 .......... .......... .......... .......... .......... .......... 643 TTTGTATAAC TCATCAGAAA CATCCAATTT TATACAAATT GTTCTATTTT GTATAATTTC 65588 .......... .......... .......... .......... .......... .......... 643 ATTATACATT GTAATTTGTA TAATAAGATT TGCATTTGTA TATTAATAAG TGTATAGGAC 65648 .......... .......... .......... .......... .......... .......... 643 GAAAATATAT GTATTTGTAT TTATATATGC ACTTTTCGCT CGCTTAATAC AAACACAAAC 65708 .......... .......... .......... .......... .......... .......... 643 ACATTTTACA TATCTTATAT CGAAATGTAT AAAATGACTA ATTGTATATC GAAAATGATA 65768 .......... .......... .......... .......... .......... .......... 643 ATTATACTGA AATCAGATGG AAAAAAATGA AATGTTTGCT GCAAATTACA ATTAAAATAG 65828 .......... .......... .......... .......... .......... .......... 643 ACTATGACTA TAACATTTAA TTTGAATTAA TCGTTTGCTA TTTTATACAA TTTATTTTTA 65888 .......... .......... .......... .......... .......... .......... 643 TAATCTATCT AAATCTAAAT AACATCTGGC AACCCAAAAT CTAGATTATT GCTTCGCATG 65948 .......... .......... .......... .......... .......... .......... 643 ATGATAAAGA TTTTATTTTT TTCAAAAAAT ATGTTGGCTT AGTCTCTCAT CCAACTTTTG 66008 .......... .......... .......... .......... .......... .......... 643 CTTCAATAGC TAAGTTGAAG TGTTCAATGC AGAGAAATAG ACTTGTGGAA AATGATGGTT 66068 .......... .......... .......... .......... .......... .......... 643 AAAAAAATTT CACTCAATTA AACACTTGGA CACGTTTTGA TATAATAGAT AAAAAAAAAA 66128 .......... .......... .......... .......... .......... .......... 643 TTCTATAATA ACGCATTATA GAATTAATAA TAGTTTGTAC CGATATAAGC TATCTCGATC 66188 .......... .......... .......... .......... .......... .......... 643 TCTAAGTAAA AAAATAATCC TAAGATAACT TGCTCCGAAA TAAAATAGTT AAAAGGATAA 66248 .......... .......... .......... .......... .......... .......... 643 AAATATTCCT TCAAACATCT TTTTTATACA TCACTTTACA TTGATTACAC TAATGAAATG 66308 .......... .......... .......... .......... .......... .......... 643 CATTTATAAC CAAACAATTT ATTCATAGAA ATTATACAAT GCATTCATTA AGAAATTATA 66368 .......... .......... .......... .......... .......... .......... 643 TGAATATTAC TAATTCCATC GTAATTTATA TTCGAATCAA ATAGTCTTTA ATCCTTTTAA 66428 .......... .......... .......... .......... .......... .......... 643 TTTAAGTGGT ACAAAAAGCA TAGGAGATAT CGAAACTGAC GGCGCAAGTT AGTCCACAAT 66488 .......... .......... .......... .......... .......... .......... 643 CCATTTTTAA AATATCTAAT AAAAGATTTT AATTTAGAAC CTTTTATATG TTAAGTCAGA 66548 .......... .......... .......... .......... .......... .......... 643 TTTCGGTGCA ATATGAAGGA TTATAACATA TATATATTTG TTGTGGTCTT TTGTTAATTA 66608 .......... .......... .......... .......... .......... .......... 643 CTCTTTTTCT TCTATGCAAT ATCTGTTTGT TTGTTTATTT TATATCATCA AACTAAGGAT 66668 .......... .......... .......... .......... .......... .......... 643 TAAATAATAT CACATATAAT ACATGTATTC GATTCATGGT GTATATTTAG TTTTTTATGG 66728 .......... .......... .......... .......... .......... .......... 643 TCCCTTTGAT CAACTATTGA AAATAAACTA ATATTTATAG TATATTCATA GAAGTTTTCC 66788 .......... .......... .......... .......... .......... .......... 643 ATAAGTTTTG ACAAAGATAT TATGAATACA AATATGGGCC AGTTAAGTTT TTTGGGCCAT 66848 .......... .......... .......... .......... .......... .......... 643 CCTTATGTAT CTAAAGCTGA GCTACTTGTG GATTGGGCCT ACATAAAATG TCTTATACTA 66908 .......... .......... .......... .......... .......... .......... 643 AAAACAAAGA GAAAAAAAGA GGGACGATCT ATTTTAATGT CCCGTTTAGA ATCGATTTGG 66968 .......... .......... .......... .......... .......... .......... 643 AATGATTTTT GATTTTTGAA CTTATAAGCC TAAATTCATA GATTGAAATT CTAACTTTTC 67028 .......... .......... .......... .......... .......... .......... 643 TTATAGTTTT ATCTTAAAAG AACTTTCTAA ATCTCAATAA ATATTATTGT CACTAATCGA 67088 .......... .......... .......... .......... .......... .......... 643 ATAATTAGGC ATTAAGTTGT CAAGTATGCA TAAACCTCTC GCAATTTAAA ACCAAAGTAT 67148 .......... .......... .......... .......... .......... .......... 643 GAAAGCAAAG ATCAATTATA ACAAAGATTC TATGATTTAT AATAATAAAA TACTAAGCTA 67208 .......... .......... .......... .......... .......... .......... 643 ATAAGATGCA TAAAATTCAC CTTAATGTAT AATATTCTCA TATGCTAAGG AAATAAAACT 67268 .......... .......... .......... .......... .......... .......... 643 TTATAAAAAG AAAGCCAAAA CTATTACTTT TAGAACAAAA TAAGTTAAAC TTATCCATCA 67328 .......... .......... .......... .......... .......... .......... 643 CTAAGCTAGG TAGTGAAGCC ACAAAACACC CTTTTTGCTT CTTGCTATTT TCAAGATTCA 67388 .......... .......... .......... .......... .......... .......... 643 TGTGATTCTA TCACAAACTA AAGCAATTAA AGTTGATTTT CCCCCTTCAT ATGGTATATC 67448 .......... .......... .......... .......... .......... .......... 643 CAACTCTACC CAAAAAAGGC ACAAGATTTT GCTTTTTGTT CATTACTTGT GAACTTCATT 67508 .......... .......... .......... .......... .......... .......... 643 GTTGTTATGT ATTTGTATTA GGTAAAAAGA ACATACAAAG 67548 ||||| | || ||||| .......... .......... .AAAAAAAAA ACGNNCAAAG 662 hqPGS_C08HBa0294K15.1+_SGN-U335075+ (57310 57576) ******************************************************************************** EST sequence 26 -strand 1101 n (File: SGN-U315280-) 1 TTTTTTTTTT CTTACAATTA TATTATGAAT TCGATAATCT TTAATGTCAC GACCCAAATC 61 GAGCCGCAAG TGGCACCCAC ACTTACCCTC CTATGTGAGC GAACCAACCA ATACAAAATC 121 CAACATTTCA ATATAATGAC GGAATATAAT GCGGAAGACT TAAACTCATT AATGAAAATC 181 AATTTTTTTT TTCTAAAAAC TCAACAACTA TTATTATCCC CAAAATCTGG AAGTCATCAT 241 CACAAGAACA TCTACTTCAA ATTACTAAAT CTAAGAGTAT CTAAGAAGCT AAAATACATA 301 AACAGCTAGT CCATGCCGGA ACTTCAAGGC ATCAAGACAT GAAGAAGAAG ATCCAGTCCA 361 AGCTAGAAGC GTTAGCTCAC CCTGAAATCC GATGTAATGA AGACTGGCTA GAGTTGCGGT 421 TGAGTTGAAG ACGACGGTAC GTTTGCCATT TTAAATGATG TTTGGCCGAA GTCTAATCTT 481 TCCGGTGAAA TCTCACTTCA ANGGAGTATT AGGACTGGAT GTGGTCATTT TTATTCTTCG 541 CTGGAGCTTG TAGCTGGTNG TCGTTGATCC TTAGAACTTC TAGTTGTNGC CGTTGTTTGT 601 TCACAAACTC GCTGATTGTA GTTCACCTGT CAAAAAAACG TTAAGGGGAA GAGGGAAAGA 661 GGTCTAGTGT TATTTAGCTC CGGTACATCG GAGCTTTGAG CTCCTCGCCG GAGCTACTGG 721 TTGCATCGAA TACGAAAACA TTGGGTTTTA GAGGTGGTTG TNGTCGTTTC TCCGTTCGTC 781 GGAAATGGTG GTGGTTCTGA TTCGCATGGA ATTGAGGGTT GCCATTGTTT GTAGCGGGTG 841 AGAGGGGAAA ATGGGACGAT GGGAGCTCGG AGTTCACCAT TAATGGAATA ACTCGAGTAA 901 AGCTTAAAGG GTGAGCAGAG GTGGTGATTT AAGAGGAGAT CTGGTGGGTT TTTAGTTCTA 961 TTTTCCTGAT GATTTCGGAG TGTGTTTGGC TGGATTGGGT TGTATTCTGG TGGCTGTTTG 1021 GTTGTTATTT GGTTGTTGTT TGGAGGGAAA CGGAGAGACA ATGACGGAGT TTGTTTGTGA 1081 TGAGCTGCTG GTTGGTTTGG G Predicted gene structure (within gDNA segment 60278 to 48214): Exon 1 57717 57311 ( 407 n); cDNA 45 447 ( 403 n); score: 0.835 Intron 1 57310 55732 (1579 n); Pd: 0.000 (s: 0.86), Pa: 0.000 (s: 0.67) Exon 2 55731 55687 ( 45 n); cDNA 448 492 ( 45 n); score: 0.667 Intron 2 55686 49968 (5719 n); Pd: 0.000 (s: 0.67), Pa: 0.817 (s: 0) Exon 3 49967 49936 ( 32 n); cDNA 493 523 ( 31 n); score: 0.531 PPA cDNA 13 1 MATCH C08HBa0294K15.1- SGN-U315280- 0.835 484 0.440 C PGS_C08HBa0294K15.1-_SGN-U315280- (57717 57311,55731 55687,49967 49936) Alignment (genomic DNA sequence = upper lines): TGTCACGACC CAAAACGGGC CGCGAGTGGC ACCCACTCTT ACCCTCCTAT GTGAGAGAAC 57658 |||||||||| |||| || || ||| |||||| |||||| ||| |||||||||| ||||| |||| TGTCACGACC CAAATCGAGC CGCAAGTGGC ACCCACACTT ACCCTCCTAT GTGAGCGAAC 104 CAACCAATCT AAACCCCAAC AATTCAACGA TAATAAATAG AATATAATGC GGAAGAATTA 57598 |||||||| ||| ||||| | ||||| | |||| | | |||||||||| |||||| || CAACCAATAC AAAATCCAAC ATTTCAA-TA TAAT-GACGG AATATAATGC GGAAGACTT- 161 AAACTCATTA ACG-AAATCA ATAATTAACT TCT-AAAACT CAAAACTTAT CATTATCCCC 57540 |||||||||| | | |||||| || || | ||| |||||| ||| | ||| ||||||||| AAACTCATTA ATGAAAATCA ATTTTTTTTT TCTAAAAACT CAACAACTAT TATTATCCCC 221 AAAATCTGGA AGTCATCATC ACAAGAACAT CTATCCTCAA ATTACTAAAT CTAAGAGTAT 57480 |||||||||| |||||||||| |||||||||| ||| | |||| |||||||||| |||||||||| AAAATCTGGA AGTCATCATC ACAAGAACAT CTA-CTTCAA ATTACTAAAT CTAAGAGTAT 280 CTAAGAAGCT AAAATAAGTA AAAGAGATAG TCCATGTCCG AACTTCAAGA CATCAAGACG 57420 |||||||||| |||||| | ||| || ||| |||||| | | ||||||||| ||||||||| CTAAGAAGCT AAAATACAT- AAACAGCTAG TCCATGCCGG AACTTCAAGG CATCAAGACA 339 CGAAGGAAAG AATCCAGTCC GAGCTAGGAA CAATATCTCA CCCTGAAATC TGATTATGCT 57360 |||| | | ||||||||| |||||| | | || |||| |||||||||| || | | | TGAAGAAGAA GATCCAGTCC AAGCTAGAAG CGTTAGCTCA CCCTGAAATC CGA-TGTAAT 398 GAAGTCTGGC TAGAGTTGCG GTTGAGTCAA AGTCGATGGC ACGTTTGCTG CACTCCACAA 57300 |||| ||||| |||||||||| ||||||| | || ||| || |||||||| GAAGACTGGC TAGAGTTGCG GTTGAGTTGA AGACGACGGT ACGTTTGCC. .......... 447 ATAACAAGAA AGAAACATAC AAGTAGGGGT CAGTACAAGG CACAAGTACT GAGTAGGTAT 57240 .......... .......... .......... .......... .......... .......... 447 CATCGGCCAA CTCAAAATAG AAAACAACAT ATATCATATA ATAACATAAA ATCAACTACA 57180 .......... .......... .......... .......... .......... .......... 447 ATACTCAACA GACAACAACA ACAAGTACCA TAACCATTGG CCACAACCCA AGCGCATCTA 57120 .......... .......... .......... .......... .......... .......... 447 TGAGGACTCA CTCCTCCACA CCATACTCGT TTGGAAAATA GTTTCTTTAA ACCTGAGTAT 57060 .......... .......... .......... .......... .......... .......... 447 ATAAACATGA TTCAAGATTC ATTCTTTTAC TATCCTGGTG TCGGAACGTG ACACTCCGAT 57000 .......... .......... .......... .......... .......... .......... 447 CCTTTACTAC TATCCTGATG TCGGAACGTG ACACCCGATC CACTACTACT ATCCTGGTGT 56940 .......... .......... .......... .......... .......... .......... 447 CGGAACGTGA CACCCGATCC ATTACTACTA TCCTGGTGTC GGAACGTGAC ACCCGATCCA 56880 .......... .......... .......... .......... .......... .......... 447 TTACTACTAT CCTGGTGTCG GGACGTGATA CCCGATCCAC TATTACTATC CTGGTGTCGG 56820 .......... .......... .......... .......... .......... .......... 447 AACGTGACAC CCGATCCACA ATTACTATCC TGGTGTCGGA ACGTGACACC CGATTCACTA 56760 .......... .......... .......... .......... .......... .......... 447 CTACTATCCT GGTGTCGGAA CGTGACACCT GATCCACTAA CCTCATTCTT TTAGTTCATC 56700 .......... .......... .......... .......... .......... .......... 447 AAGCCTTCTT TTATACCAAG GCATCATCAT TAACACAGAG GGTTTTAGGT TTAAGCTTCA 56640 .......... .......... .......... .......... .......... .......... 447 CAACCTCATC TTTCCAACCC ATTACAATTA CATAATCACA TCATGCAAGC ATACAATTAA 56580 .......... .......... .......... .......... .......... .......... 447 GCATATGTAA GACTTTACAA TACTACCCAA TACATATCAT TCGCTATTAA GAGTTTACTA 56520 .......... .......... .......... .......... .......... .......... 447 TGAAATAGCA TAAACCATAA CCTACCTCCA CCGAAGAATT CGTGATCACG CAAGCTACTC 56460 .......... .......... .......... .......... .......... .......... 447 CTCAAGGTCT TTGCTTTCCT CTTCATTCTC TCTTCTCTCG CTCGTTCGTC CCTCTCTTTT 56400 .......... .......... .......... .......... .......... .......... 447 GTTCTTTCTA TTTTTCCTTA TTCAAACTCT TTTTCTTTTA CCCTAATTAC CATATAATTA 56340 .......... .......... .......... .......... .......... .......... 447 AGTATAAAAG ATGGTAAAAG TAACCCACTA TTTATTTCAA GGTTATCACC TTTAACCCCC 56280 .......... .......... .......... .......... .......... .......... 447 AAGTAATTGA ATTATTAACA TTAACCCACT AACTTTATAA TTATAAGCAG AAATAGTCCA 56220 .......... .......... .......... .......... .......... .......... 447 AAACGCCCCT TAAAACATTT AACAGAAATC TGACCCAGTC AAGGTTACGC AGCCTGTGAC 56160 .......... .......... .......... .......... .......... .......... 447 GGCCCGTCGT GCCTATGACG GTCCGTCCTG CTGCTTCCGT CACAAAGTTC AGAGACTGAA 56100 .......... .......... .......... .......... .......... .......... 447 TTTCATTAAA GGGTCTGTGA CGGTCCGTCG TGCCCACGAC GGTCCGTCCT GCCATGTCGT 56040 .......... .......... .......... .......... .......... .......... 447 CGCGAAGTTC AGAGAGTTGT TCTCATTACC CAAATTTTTA GAATCTAAGT GTTTTGGAAC 55980 .......... .......... .......... .......... .......... .......... 447 GAGACCCCCT CGACGGTCCG TCGTGCCCAC GACGGTCCGT CGTGCCCACG ACGGTCCGGG 55920 .......... .......... .......... .......... .......... .......... 447 ATCCGTCGAC CCAGACAGCT ATTACCAGAA TAAACTCTAC TGCTCAAAAC GACTAACAGG 55860 .......... .......... .......... .......... .......... .......... 447 TCGTTACACC TACTTTTATT TTTGGTTGTC TGGTTATTCA ACAATGTAAA AGTGTTTGCG 55800 .......... .......... .......... .......... .......... .......... 447 TTTGACCAAG ATGTAACATG TGAACTTAAG TGCACGGTTT ATTTGGTTTG TCACCTTGTT 55740 .......... .......... .......... .......... .......... .......... 447 TCTAAGTGAT TTTCAATGTT TTTTCTTTTG TGTCAAATCT TAACGGTTAA ATTGATAATC 55680 || ||| |||| | ||| ||| ||||| | |||| || || ........AT TTTAAATGAT GTTTGGCCGA AGTCTAATCT TTCCGGTGAA ATC....... 492 GAACCGATAA CGATTAAAAG CTGATAAATC AATAACCGAT AATTCAATAT CTTAATGGTT 55620 .......... .......... .......... .......... .......... .......... 492 TTATAACGGT TTAGCATCTC CACAAACCGA TAACCAATAA GACAACCCGA TAAACTTCAA 55560 .......... .......... .......... .......... .......... .......... 492 AATCGAATCG AACCGACCGA TACACAGCCC TACACGTCGA TATATTGCAT GACATAAGAA 55500 .......... .......... .......... .......... .......... .......... 492 ACTGGTCACG AACTTTTATA GAAGTATGAG ACTCTTAATA AAAAGTTGAA ATAAGTGTTG 55440 .......... .......... .......... .......... .......... .......... 492 AAAACACTTC TAAACTTGAT GAAAAATTAA AAGTATATTA TATTCGGGTT GCAAGATTAG 55380 .......... .......... .......... .......... .......... .......... 492 GGGTGTGTTG AAGTTTAGTC AATCAAGTAA ATTAAAGGTT CTTTTTTTTA AAAATTGTTA 55320 .......... .......... .......... .......... .......... .......... 492 ATAATTCAAA AAGTAAAACT AATGATTTAC ATATAATTTA GAAGTGTTTC CAATACTTCC 55260 .......... .......... .......... .......... .......... .......... 492 CTCGTTTAAA GATACATGGG AAGATTTTTC AAAATGTTGA ATGATTTACA TGGAAATTAA 55200 .......... .......... .......... .......... .......... .......... 492 TAAGTGTTCA GCATTCGGTC ATTTTGCATT TTTCTCTGTA CAAATTCAGA CTGCTTCACA 55140 .......... .......... .......... .......... .......... .......... 492 CATCATACAT GTGAAAAACT AGTTCTCGCT CATTTTTTTT ATGTTTAATT ATTTTTAACG 55080 .......... .......... .......... .......... .......... .......... 492 ACAATTCAGT AACAGTGACA GTTAAAAATT TCATAAGAAT GTTTAAGAAT TATATAGGTA 55020 .......... .......... .......... .......... .......... .......... 492 AAAAACAATT AACGAATGAA TACATTAAAA AATTGTAAAT TATACAAAGT AATATAAATA 54960 .......... .......... .......... .......... .......... .......... 492 ATTATTATTT TTAATTAAAA ATAGGGATAA GATATGAATA TCCCTAAATT ATGACCGAAA 54900 .......... .......... .......... .......... .......... .......... 492 TTTCAGATAT ATACAGTAAC TAAATTAAAA TCTTATTATC TATGAATCCA TTTTTTTTTT 54840 .......... .......... .......... .......... .......... .......... 492 GTAATTTTAT ACATTTATTT ATTAACGTAT TCAAAAATTT AGTTAAGTTT TACTTTATAC 54780 .......... .......... .......... .......... .......... .......... 492 AAAAATTATA CATATCTATA GGAAGATTTA TCAAATATAT GTAATATGTG GCCCCGAATA 54720 .......... .......... .......... .......... .......... .......... 492 TGTATTTTTG CTTGTACCCA AACTTTTATT CTTCAATTTA CGTAAATAAA TAAAATTTTG 54660 .......... .......... .......... .......... .......... .......... 492 AATTATACGT GGACACATAC ATTAATGTAT ATGCTACGTT TAGAAAAATA TATTTGGTAG 54600 .......... .......... .......... .......... .......... .......... 492 GTCGTTATTT TTCACATAAA AGACATTCTG TTTATAATTT TTATTTTTTT TAATATCATC 54540 .......... .......... .......... .......... .......... .......... 492 TTTATTATCC GATAACAGTA AGATGGCTTA TTAATAGATA TATTTATAGA CTATATCACA 54480 .......... .......... .......... .......... .......... .......... 492 ACAATTATCT AATAGATGTC CTGATGGTAT AAATACACCT AAAACATAAA GTCACGCTTC 54420 .......... .......... .......... .......... .......... .......... 492 TGAGCCTACA CTTAGATGAG ACGGACACTC GAGAATCATT ATTGGCCTCA AACGAATTCT 54360 .......... .......... .......... .......... .......... .......... 492 TGGTCTGACT TATTTACTCA ACGAAAGACT TAAAACATAA AGAAAAATAT TCAAATGCTA 54300 .......... .......... .......... .......... .......... .......... 492 AATATCTCAA CTATCTCGAA CTTAATGCAT GATGTTTTAA CATTAAACAT TTAACTTAGC 54240 .......... .......... .......... .......... .......... .......... 492 TAAAATGACA ACTCAAGTAT GAACATAATT AAATAACAAA AAGATAATAA ATGGACTAAC 54180 .......... .......... .......... .......... .......... .......... 492 ATCTGACTGC AAACTATGAA GCCTCTAAAA CAATTGAGAT GGATGTTAGG GACAAACCCG 54120 .......... .......... .......... .......... .......... .......... 492 ATGACATCCT AATGAACTAG TAAAATCACT GAAAGCAATA AATTAAAAGA GTCCTCTGGA 54060 .......... .......... .......... .......... .......... .......... 492 ATACAAGGAA GTTCACTAAC TGACTCTAGA GTGCTCACTG GATCAACGGT GTGCTGCGTG 54000 .......... .......... .......... .......... .......... .......... 492 CTGATTATGA TTACCTGTGT TTGCATCATA ATATGATGCA GGCCAACTAA TATCAATAAA 53940 .......... .......... .......... .......... .......... .......... 492 TTGAATACAA GAGTATGCGA GTTGAAATAC TAAAACAAGA CATAAGCTTG GAAAGAGTCC 53880 .......... .......... .......... .......... .......... .......... 492 GAAAGAAACA CTTACCTAGC CTTTACTTAA GTAAACTGAA CTCAACTAAT TTCAATAGAA 53820 .......... .......... .......... .......... .......... .......... 492 AGCAATGTAA ATAAATGCAA TACAAAGAAA AGCTTTAAAA CATGAACTTT AATTCTGTTT 53760 .......... .......... .......... .......... .......... .......... 492 ATTTAGAAAC ACAATGATAA TGGCGTATAT ATGCAAAGAT ACAATATGAA CTCTATTTGT 53700 .......... .......... .......... .......... .......... .......... 492 ATATAAAAAT ATAATTATAT CTGACGTATA TAAAAATACA AAATACTATT GTGGGTAAGG 53640 .......... .......... .......... .......... .......... .......... 492 TTGGACAACG GACCGGGTTG TACCGATACC GGTCCGATTC GGTTGCCTAC GGAATGGAAT 53580 .......... .......... .......... .......... .......... .......... 492 AAGACATCGT GAATCGATAT GAGGAACGGA ATGGAACCGC AATTTGGTAC CGCTGTACGG 53520 .......... .......... .......... .......... .......... .......... 492 TACCGATTTA TCCCAATTTA TTTCGATTCT GATCCGATTC CAATTAATTA TTATTTATTA 53460 .......... .......... .......... .......... .......... .......... 492 ATTAACGTTT ACATCCCTAC AAATCCGTCC AACCTTTTTT TACCTCATAA AGCCCTAAAT 53400 .......... .......... .......... .......... .......... .......... 492 AGAAAAAAAA TAATTATATG TAATAGGCTC AAATTTTGTG GGCTTGGAAT TGTGGCCTTA 53340 .......... .......... .......... .......... .......... .......... 492 AATTATCTAT CAACTGTGTA TGTAAAACTC ACTCGTATTT AAATAATTTT CTAGACTGTG 53280 .......... .......... .......... .......... .......... .......... 492 CTAGAAATAT AAAATAAATG TTAATAAATG TAACAAATAA AATGATTATA AAAAAATAAA 53220 .......... .......... .......... .......... .......... .......... 492 TGTAATAAAT ATACTAATGA CGTGAATTTA ACAAAATAAC AACCTAATAA AAAATGATAA 53160 .......... .......... .......... .......... .......... .......... 492 AATATTTGAA CATATTTAAC CGGTTGTGAC GAAAATAAGG TAATTTAAAT TTATCAGAAG 53100 .......... .......... .......... .......... .......... .......... 492 AAAATATTCT AAAACTTGAC AAATGAGGAG AGTTATCGAT AAACTTATTT ATTTAAAATT 53040 .......... .......... .......... .......... .......... .......... 492 ATAAAAAAAA TCATTTTGAA CTATTAAATA AATATAACTT TAAAAGTTAC AAATTTTGAA 52980 .......... .......... .......... .......... .......... .......... 492 ATGTTATAAA CTTAAGTAAA AAATTAAATT ATAAATTTAA AAACTATTAA TTTAAACTTA 52920 .......... .......... .......... .......... .......... .......... 492 GAAAAAATAA AAAAAATCAT AATTTCGTAA TTTTAAAAAA TATTTTTTGA AATAACTAAA 52860 .......... .......... .......... .......... .......... .......... 492 TGTGTCGTCC CGTTTATCCC ATCCAGTTTC ATTCCTGTTT CATCCCGGTA TATAGTGGGA 52800 .......... .......... .......... .......... .......... .......... 492 CTAGACGAAA TCAAGTATTC GTCTTGATAA TTCCGGTCCG GTTCATTTCG GTGTCGGTCA 52740 .......... .......... .......... .......... .......... .......... 492 ACGAACCGGT CAACTCGTTC CGTTTCGGTA TAGTACCGAT TCGTGCCGGT CCAGTGGTTC 52680 .......... .......... .......... .......... .......... .......... 492 CATTCTGATC CGTTGCTAGT CTTAATTGTG GGAGTTTCTT TAACCGACAA TCATCACTTA 52620 .......... .......... .......... .......... .......... .......... 492 AGAGTTATAT TGATGATACA GTGTCTCGCT CATGCTTCCA AAATTGTCAT ATACTTTGTC 52560 .......... .......... .......... .......... .......... .......... 492 GTCATATAAG ACGTCTTTAC TAAGTGGATC CACTAGTCTA TGCTAAAAAA CAATAAGAAA 52500 .......... .......... .......... .......... .......... .......... 492 TCATCTAAAA AGTATGGTCC TTTCTATCCA TAATGGCTAC ATGGTTTTAG GGGGTTGTGA 52440 .......... .......... .......... .......... .......... .......... 492 GTTATATGAA CTCTCCTTCA TATCGGTGTT CAATACTACT CCCAAAATAT ACTAGCTCTT 52380 .......... .......... .......... .......... .......... .......... 492 TATGCTTAGA AGCATAACTT CTTTCTATGG TTTGAGATAA TTGCTCAAAG ACTTAGCTTA 52320 .......... .......... .......... .......... .......... .......... 492 GATGTTATCT TGAAAATCTT AGTTTCCTCT CTAGCTTAAT TGTAAAGCAT TTACTCTTTA 52260 .......... .......... .......... .......... .......... .......... 492 ACTGAAAACT AGCTCAAAGG CTCTTTTGAA AATCTTAATT TCCTTTCTTA TTGAAATGTG 52200 .......... .......... .......... .......... .......... .......... 492 AAAACATTTA TTCTTTATTG AAAAACTAGC TCAAAGGCAC TTTTGAAAAT CTCATTTCTT 52140 .......... .......... .......... .......... .......... .......... 492 TTCTTGTTTA AATATGAAAA CATTTACTCT TTTGGAATAC ATAATCTCCA TATACTTTTG 52080 .......... .......... .......... .......... .......... .......... 492 AAGAAATGAA CTTCAATTTT ACTGTTTATT GAACTCAAAA CTCAAGTCAT AAAACAAAGT 52020 .......... .......... .......... .......... .......... .......... 492 TAAAACATTT GTAAAAGACT TCTAAAAACT TTATGAACTG CTCTTGACTT GACACTTAAC 51960 .......... .......... .......... .......... .......... .......... 492 TTCTCTTGAC TTGGCTTGTA ACTTCTCTTG ACTAGACTCT TAATTTTTCT TGACTTGAAT 51900 .......... .......... .......... .......... .......... .......... 492 CTTAACTCAC CTTGAATTTA GTTTATGGAT TCAAGGATCA TGATTTGTGA TAGGAAAGAT 51840 .......... .......... .......... .......... .......... .......... 492 CTCATGATGT GTTGGAATAA TTTTAGATAG TTAATCATGA GAAACGATCA AGAAATCACT 51780 .......... .......... .......... .......... .......... .......... 492 ACTGGAAAGC TGCTTCGCAA AGCAGAGATG TAATTCAATT TTGGTGGCGA AAATACTTTT 51720 .......... .......... .......... .......... .......... .......... 492 GAGGTAGAAA GGTCTGTGAT CGCTCTGCGA AAACACAAAT TTTCAAAATG CAGAATGGGT 51660 .......... .......... .......... .......... .......... .......... 492 TCGACGAAAT TTCTTCTTCG CTTTTCAACT CTATACCCTC TAAACTCGTG GATTCTTTCC 51600 .......... .......... .......... .......... .......... .......... 492 CCAAACACTT CGAATGGATT ATATGATTAA AGTACATCAA ATTCTACAGA AAATCAAACC 51540 .......... .......... .......... .......... .......... .......... 492 TAAAATCATG TATTCAGATT GAACAACTCC TCAACAATTT CAATGAATCA AGAATTTAAT 51480 .......... .......... .......... .......... .......... .......... 492 ATAACTACAA CAAATCCATC ATGAATTCAA TTTCTAAGCT TTTAAGAACT TAAAACGCTG 51420 .......... .......... .......... .......... .......... .......... 492 AAATAAATCA TGATTGGCGC GTGAGTGAAC TAACCCAGCG CTATGTGTAG TGGCGGATCC 51360 .......... .......... .......... .......... .......... .......... 492 AGGGTTTCTT AGTTATGGGT GTTTAACTAT TTGTAATTTG AAGTTGGTAC CAAAATGGGT 51300 .......... .......... .......... .......... .......... .......... 492 GCTCAATTTA CATATTCATA CAAATTATAT TACTGTTGTC TCCAAATGTA ATGGGTGCTG 51240 .......... .......... .......... .......... .......... .......... 492 AAGCACCCAT GCACTTGAAT GTGCATCCGC CACTGGCTAT GTGAACTCAC ATACCTTGTA 51180 .......... .......... .......... .......... .......... .......... 492 GGGATCACCC CCGACGAAAT CCACAAGCAA AACTCGATGA TCTTGTCGAA TCTTGCTTCT 51120 .......... .......... .......... .......... .......... .......... 492 TTTCTCTTTT CTCCTTTCTC CTCTTCCTAG AGTATTTTTG TAAAAGTGTA AACTGATCTA 51060 .......... .......... .......... .......... .......... .......... 492 ATTTTATATA GACCCTAACT TAATCACCAA AAACGAAATA AATTAATTGG GCAAGAAAAA 51000 .......... .......... .......... .......... .......... .......... 492 GACTGAACTA CCCTTTAAAA TTCGGATGGG GCCTCCTTAT TCCAACATCC TAACTTTCAA 50940 .......... .......... .......... .......... .......... .......... 492 AAGGCATAAT TTTCTCAAAC GAACTCGAAA TTGTGCAAAC TCAGTGGTGT TAGAAAGATT 50880 .......... .......... .......... .......... .......... .......... 492 ATTCTAAGAT CTTTTCAAAC ATATCAGAAA GTACACTAAC TCATCATGAG TTAAGATTTA 50820 .......... .......... .......... .......... .......... .......... 492 TAGCCGTTTG AAGTTGACCA AAAACCTCAC TTTACTTAAC TTAAACAAAT TTTCAGATTT 50760 .......... .......... .......... .......... .......... .......... 492 TTTTATTATT TCAAAAAATA ACTATTTTCA GTTTTTAGCT TCTTTTTAAC TATTTCAAAT 50700 .......... .......... .......... .......... .......... .......... 492 TGCGAGATGT TATAAACACA AAATAGATTT AGCAGTAAAC ATTTGGATTT TGAAAGGAAT 50640 .......... .......... .......... .......... .......... .......... 492 AAAAGCACTT TGATGCTGGA TCTTTAAAAA AATTGAAAAT AACGTAAAAT CAGAAGTAGC 50580 .......... .......... .......... .......... .......... .......... 492 AGTAAACATT TAATTCTGGA AGGAAAATAA AAGCAGTTTG CTGCTGGAAT ATTTTTCTCT 50520 .......... .......... .......... .......... .......... .......... 492 TGCAGATATT AGTAATAACA ACTTATTATA ATTATTTTAT TTACTTCTTA GGCAAAATAA 50460 .......... .......... .......... .......... .......... .......... 492 CGAAGTCAAT GAGTACGTGT ACGCTAATAT CTGAATGGTT ACTCAATGTA GAATAGTTCA 50400 .......... .......... .......... .......... .......... .......... 492 TTAACTCAAT TTTATTTTAT TACTTGAAAA TCATTTAATT AGGAATACAC TTAATTTTAC 50340 .......... .......... .......... .......... .......... .......... 492 TTTATAATTT AAAAATTATT TAACTATTAT TATTTCACTT ACAGTATCGT TAAAATTGGT 50280 .......... .......... .......... .......... .......... .......... 492 TAAGAAAAAA AAATGATAAG GAATGTAGGC TAGCAAGAAT GTTGGTGACT GAAATCCCCT 50220 .......... .......... .......... .......... .......... .......... 492 ATTAGGACTA ACGTGGCAGC AAAATTCTTA GGTCATTGGA CCTAATTTAT GTAGTTTAAC 50160 .......... .......... .......... .......... .......... .......... 492 TAAATTTCTC ACTCATTTTG TTAGTGACAA AATCAACTTT AATTTTTACT AAGAATTAAT 50100 .......... .......... .......... .......... .......... .......... 492 TTTTATTTTT ATTTTTCAAA CAATTTTTAG TATCTAATAA TTTATTATTA TTATTATTAT 50040 .......... .......... .......... .......... .......... .......... 492 TATTATTATC ATTATTATTA TTATTATTAT TATTATTATT ATTATTATTA TTATCATCAT 49980 .......... .......... .......... .......... .......... .......... 492 CATTATTATT AGAGATGTCA AAATAGATTT AGCTCATAGA GTTG 49936 | ||| | || || || | | || || .......... ..TCACTTCA ANGGAGTATT AGGAC-TGGA TGTG 523 hqPGS_C08HBa0294K15.1-_SGN-U315280- (57717 57311) ******************************************************************************** EST sequence 25 +strand 1101 n (File: SGN-U315280+) 1 CCCAAACCAA CCAGCAGCTC ATCACAAACA AACTCCGTCA TTGTCTCTCC GTTTCCCTCC 61 AAACAACAAC CAAATAACAA CCAAACAGCC ACCAGAATAC AACCCAATCC AGCCAAACAC 121 ACTCCGAAAT CATCAGGAAA ATAGAACTAA AAACCCACCA GATCTCCTCT TAAATCACCA 181 CCTCTGCTCA CCCTTTAAGC TTTACTCGAG TTATTCCATT AATGGTGAAC TCCGAGCTCC 241 CATCGTCCCA TTTTCCCCTC TCACCCGCTA CAAACAATGG CAACCCTCAA TTCCATGCGA 301 ATCAGAACCA CCACCATTTC CGACGAACGG AGAAACGACN ACAACCACCT CTAAAACCCA 361 ATGTTTTCGT ATTCGATGCA ACCAGTAGCT CCGGCGAGGA GCTCAAAGCT CCGATGTACC 421 GGAGCTAAAT AACACTAGAC CTCTTTCCCT CTTCCCCTTA ACGTTTTTTT GACAGGTGAA 481 CTACAATCAG CGAGTTTGTG AACAAACAAC GGCNACAACT AGAAGTTCTA AGGATCAACG 541 ACNACCAGCT ACAAGCTCCA GCGAAGAATA AAAATGACCA CATCCAGTCC TAATACTCCN 601 TTGAAGTGAG ATTTCACCGG AAAGATTAGA CTTCGGCCAA ACATCATTTA AAATGGCAAA 661 CGTACCGTCG TCTTCAACTC AACCGCAACT CTAGCCAGTC TTCATTACAT CGGATTTCAG 721 GGTGAGCTAA CGCTTCTAGC TTGGACTGGA TCTTCTTCTT CATGTCTTGA TGCCTTGAAG 781 TTCCGGCATG GACTAGCTGT TTATGTATTT TAGCTTCTTA GATACTCTTA GATTTAGTAA 841 TTTGAAGTAG ATGTTCTTGT GATGATGACT TCCAGATTTT GGGGATAATA ATAGTTGTTG 901 AGTTTTTAGA AAAAAAAAAT TGATTTTCAT TAATGAGTTT AAGTCTTCCG CATTATATTC 961 CGTCATTATA TTGAAATGTT GGATTTTGTA TTGGTTGGTT CGCTCACATA GGAGGGTAAG 1021 TGTGGGTGCC ACTTGCGGCT CGATTTGGGT CGTGACATTA AAGATTATCG AATTCATAAT 1081 ATAATTGTAA GAAAAAAAAA A Predicted gene structure (within gDNA segment 56417 to 67322): Exon 1 57313 57760 ( 448 n); cDNA 657 1101 ( 445 n); score: 0.789 MATCH C08HBa0294K15.1+ SGN-U315280+ 0.789 448 0.407 C PGS_C08HBa0294K15.1+_SGN-U315280+ (57313 57760) Alignment (genomic DNA sequence = upper lines): CAAACGTGCC ATCGACTTTG ACTCAACCGC AACTCTAGCC AGACTTCAGC ATAATCAGAT 57372 ||||||| || ||| ||| |||||||||| |||||||||| || ||||| | ||| ||| CAAACGTACC GTCGTCTTCA ACTCAACCGC AACTCTAGCC AGTCTTCATT A-CATCGGAT 715 TTCAGGGTGA GATATTGTTC CTAGCTCGGA CTGGATTCTT TCCTTCGCGT CTTGATGTCT 57432 |||||||||| | || | | |||||| ||| |||||| | | |||| || ||||||| || TTCAGGGTGA GCTAACGCTT CTAGCTTGGA CTGGATCTTC TTCTTCATGT CTTGATGCCT 775 TGAAGTTCGG ACATGGACTA TCTCTTTTAC TTATTTTAGC TTCTTAGATA CTCTTAGATT 57492 |||||||| | ||||||||| || |||| ||||||||| |||||||||| |||||||||| TGAAGTTCCG GCATGGACTA GCT-GTTTAT GTATTTTAGC TTCTTAGATA CTCTTAGATT 834 TAGTAATTTG AGGATAGATG TTCTTGTGAT GATGACTTCC AGATTTTGGG GATAATGATA 57552 |||||||||| | | |||||| |||||||||| |||||||||| |||||||||| |||||| ||| TAGTAATTTG AAG-TAGATG TTCTTGTGAT GATGACTTCC AGATTTTGGG GATAATAATA 893 AGTTTTGAG- TTTTAGAAGT TAATTATTGA -TTTCGTTAA TGAGTTTTAA TTCTTCCGCA 57610 | ||||| |||||||| || ||||| |||| |||| |||| ||||| ||||||||| GTTGTTGAGT TTTTAGAAAA AAAAAATTGA TTTTCATTAA TGAG-TTTAA GTCTTCCGCA 952 TTATATTCTA TTTATTATCG TTGAATTGTT GGGGTTTAGA TTGGTTGGTT CTCTCACATA 57670 |||||||| | ||||| ||||| |||| || ||| | |||||||||| | |||||||| TTATATTC-C GTCATTAT-A TTGAAATGTT GGATTTTGTA TTGGTTGGTT CGCTCACATA 1010 GGAGGGTAAG AGTGGGTGCC ACTCGCGGCC CGTTTTGGGT CGTGACA-AA CTTGGTATCA 57729 |||||||||| ||||||||| ||| ||||| || ||||||| ||||||| | |||| GGAGGGTAAG TGTGGGTGCC ACTTGCGGCT CGATTTGGGT CGTGACATTA AAGATTATCG 1070 GAGCATTAGG TTCGTTGGTC TCATCACACA A 57760 | || | ||| | | | | | AATTCATAAT ATAATTGTAA GAAAAAAAAA A 1101 hqPGS_C08HBa0294K15.1+_SGN-U315280+ (57313 57760) ******************************************************************************** EST sequence 48 -strand 1778 n (File: SGN-U316028-) 1 TTTTTTTTTT ATTAACGTAA TCAATTAAAT AAACTTCTAA AGTTTAATAT TTATTAATCC 61 CAAAATCTGG AAGTCATCAC ATCAATAACA TCTATCCTCA GTAAATCTAA GAGTATTTAA 121 GAAGCTAAAA TAAGTAAAAA GAAAACGGTC CATGTCCGAA CTTCAAGACA TCAAGACGTG 181 AGGGAGAGAA TCCAGTCCGA GCTAGGAATA ATAGCTCACC CTGAAATCTG ATGTGCTGGA 241 GACTGGCTAG AGTTGAAGGC GGGTCGAAGT TGATGGTGCA CTTGCTTCTT ACAACTCATC 301 CTTCACTTGA TCTGTTTGAG TTTGTGATAT GCTAAAATCA AAGGCAGGGC TACCTCTGTT 361 TGTCTGGATA AATTCAATAA TGGCCTCTTT TGTTCTATTA CCCTCAAACC GTGACAAACT 421 ACCCGTTGAA GATCTCAAGT ATAAAGTTGG GAATCCTTCA ACTTCAAATA CGTCACGAGG 481 TATATCATTT TCCGTTCCAT CAATTTTAGC AATCACGACA TGAGGATCTT TTTCAAATGA 541 GATAGCTATT TCATCCAAGA CGGGAGCAAA CTCCTCACAA TATCTACACC CAAGTCGATA 601 GAACTCCAAC AGTACATCTT TTCCCGAATT AAACACCATA TCGTCAAGAG TCTCTGCAAC 661 CACCACCTTC ACAGTTTCAT TGTTAAATTC TGGAATTGGC TGTGACTTCA AGTATGGCTT 721 CAACTTTCCG TCCTTACAAT CCTTCAACCA AGATGCAAGG TTATCGGGTT GTACATGTCG 781 CTGAACGTAT TTTGTGCTAC CCATGGTAAG TACGAAGATT AAAGGTGTCT GATCAGTGTC 841 CAATCCAAAA TACTGAAGGG CCTTTTTACC ACTCTCAGCA TCTCCCAAGA GGAAGTTTGT 901 TTCCTTTCCC TTGTAACTGA GTGCAAGATC ATAGTACTTA ATCTTGAAAG CATCAAGATC 961 AGTGCTGAAG TTCAGAAATA GAAATACCTT GTCTCCTGGA CTATGCAAAA AGTGATTAAC 1021 AAATTGTTGG TTTTCTGGAT TATCATCAAG AATAGCCATG ATTGGGACAC TAGTTTCTTC 1081 AATGAAATTC TGCATTGCCT CAATTTGAAA ATCCTCGAAA TCAGCATAAA GTTCATCATA 1141 TGGCTTCAAT AGACGGATAG TTGGCTTATC AACCAGCCCA CCACGAGGAA GGAGTTTGGC 1201 ATCAAGTGTG TGAACAAAAT CGTAATCTAC TCGTAAATCT TCAGCTAAAG TAGTAAAATT 1261 GATGATCTTC TCTAAAGAGA GTTGTGGAAA TATACCAGCA ACAACAATCT TTTTCTCATC 1321 AATAAAGGTT GCAGCATCTT TCTCGGTTTT GATTTCAAGA GATGCAGGGC CCCCATGTTT 1381 TTTCAAATAA GCAATTATAC CTTCCGTCTC ACGAGTACCT TTGTAATCAT GAACCGTCTT 1441 CCCACCATTA CGGAAGATCT TAATGCTTGG AACACCATTA ATGGTGAAAT TTCTTGCAAG 1501 TTCAGCATTT TCTAGAATTG TTGTATCCAT TTTAGCAAGA ATAACTGGAG GATCATGATT 1561 ACTCAATACC GAAGCTGCTT CTTCGTACTT TGGCTCAAGT TGCTGGCAGT ATCCACACCA 1621 TGGGGCATAG AACTGAACAA CGATCATCTT GTGCTGGGAA ATAATTTGAG AGTAATTAGT 1681 ATGGTCCAAA GTCCATACAA CCTCATTTTC TGCTGCAAAA GCAGTAACAG CAAGAAGAGC 1741 TGCTAAAACA AGAAATTTCA TCATCAACCT CAAATCTC Predicted gene structure (within gDNA segment 59048 to 44046): Exon 1 57542 57322 ( 221 n); cDNA 59 275 ( 217 n); score: 0.842 Intron 1 57321 45457 (11865 n); Pd: 0.815 (s: 0.78), Pa: 0.239 (s: 0) Exon 2 45456 45438 ( 19 n); cDNA 276 294 ( 19 n); score: 0.605 PPA cDNA 13 1 MATCH C08HBa0294K15.1- SGN-U316028- 0.842 240 0.135 C PGS_C08HBa0294K15.1-_SGN-U316028- (57542 57322,45456 45438) Alignment (genomic DNA sequence = upper lines): CCCAAAATCT GGAAGTCATC ATCACAAGAA CATCTATCCT CAAATTACTA AATCTAAGAG 57483 |||||||||| |||||||||| | ||| || |||||||||| | | || |||||||||| CCCAAAATCT GGAAGTCATC ACATCAATAA CATCTATCCT C-----AGTA AATCTAAGAG 113 TATCTAAGAA GCTAAAATAA GTAAAA-G-A GATAGTCCAT GTCCGAACTT CAAGACATCA 57425 ||| |||||| |||||||||| |||||| | | | |||||| |||||||||| |||||||||| TATTTAAGAA GCTAAAATAA GTAAAAAGAA AACGGTCCAT GTCCGAACTT CAAGACATCA 173 AGACGCGAAG GAAAGAATCC AGTCCGAGCT AGGAACAATA TCTCACCCTG AAATCTGATT 57365 ||||| || | || ||||||| |||||||||| ||||| |||| ||||||||| |||||||| | AGACGTGAGG GAGAGAATCC AGTCCGAGCT AGGAATAATA GCTCACCCTG AAATCTGA-T 232 ATGCTGAAGT CTGGCTAGAG TTGCGGTTGA GTCAAAGTCG ATGGCACGTT TGCTGCACTC 57305 ||||| || |||||||||| ||| | | ||| |||| | ||| GTGCTGGAGA CTGGCTAGAG TTGAAGGCGG GTCGAAGTTG ATG....... .......... 275 CACAAATAAC AAGAAAGAAA CATACAAGTA GGGGTCAGTA CAAGGCACAA GTACTGAGTA 57245 .......... .......... .......... .......... .......... .......... 275 GGTATCATCG GCCAACTCAA AATAGAAAAC AACATATATC ATATAATAAC ATAAAATCAA 57185 .......... .......... .......... .......... .......... .......... 275 CTACAATACT CAACAGACAA CAACAACAAG TACCATAACC ATTGGCCACA ACCCAAGCGC 57125 .......... .......... .......... .......... .......... .......... 275 ATCTATGAGG ACTCACTCCT CCACACCATA CTCGTTTGGA AAATAGTTTC TTTAAACCTG 57065 .......... .......... .......... .......... .......... .......... 275 AGTATATAAA CATGATTCAA GATTCATTCT TTTACTATCC TGGTGTCGGA ACGTGACACT 57005 .......... .......... .......... .......... .......... .......... 275 CCGATCCTTT ACTACTATCC TGATGTCGGA ACGTGACACC CGATCCACTA CTACTATCCT 56945 .......... .......... .......... .......... .......... .......... 275 GGTGTCGGAA CGTGACACCC GATCCATTAC TACTATCCTG GTGTCGGAAC GTGACACCCG 56885 .......... .......... .......... .......... .......... .......... 275 ATCCATTACT ACTATCCTGG TGTCGGGACG TGATACCCGA TCCACTATTA CTATCCTGGT 56825 .......... .......... .......... .......... .......... .......... 275 GTCGGAACGT GACACCCGAT CCACAATTAC TATCCTGGTG TCGGAACGTG ACACCCGATT 56765 .......... .......... .......... .......... .......... .......... 275 CACTACTACT ATCCTGGTGT CGGAACGTGA CACCTGATCC ACTAACCTCA TTCTTTTAGT 56705 .......... .......... .......... .......... .......... .......... 275 TCATCAAGCC TTCTTTTATA CCAAGGCATC ATCATTAACA CAGAGGGTTT TAGGTTTAAG 56645 .......... .......... .......... .......... .......... .......... 275 CTTCACAACC TCATCTTTCC AACCCATTAC AATTACATAA TCACATCATG CAAGCATACA 56585 .......... .......... .......... .......... .......... .......... 275 ATTAAGCATA TGTAAGACTT TACAATACTA CCCAATACAT ATCATTCGCT ATTAAGAGTT 56525 .......... .......... .......... .......... .......... .......... 275 TACTATGAAA TAGCATAAAC CATAACCTAC CTCCACCGAA GAATTCGTGA TCACGCAAGC 56465 .......... .......... .......... .......... .......... .......... 275 TACTCCTCAA GGTCTTTGCT TTCCTCTTCA TTCTCTCTTC TCTCGCTCGT TCGTCCCTCT 56405 .......... .......... .......... .......... .......... .......... 275 CTTTTGTTCT TTCTATTTTT CCTTATTCAA ACTCTTTTTC TTTTACCCTA ATTACCATAT 56345 .......... .......... .......... .......... .......... .......... 275 AATTAAGTAT AAAAGATGGT AAAAGTAACC CACTATTTAT TTCAAGGTTA TCACCTTTAA 56285 .......... .......... .......... .......... .......... .......... 275 CCCCCAAGTA ATTGAATTAT TAACATTAAC CCACTAACTT TATAATTATA AGCAGAAATA 56225 .......... .......... .......... .......... .......... .......... 275 GTCCAAAACG CCCCTTAAAA CATTTAACAG AAATCTGACC CAGTCAAGGT TACGCAGCCT 56165 .......... .......... .......... .......... .......... .......... 275 GTGACGGCCC GTCGTGCCTA TGACGGTCCG TCCTGCTGCT TCCGTCACAA AGTTCAGAGA 56105 .......... .......... .......... .......... .......... .......... 275 CTGAATTTCA TTAAAGGGTC TGTGACGGTC CGTCGTGCCC ACGACGGTCC GTCCTGCCAT 56045 .......... .......... .......... .......... .......... .......... 275 GTCGTCGCGA AGTTCAGAGA GTTGTTCTCA TTACCCAAAT TTTTAGAATC TAAGTGTTTT 55985 .......... .......... .......... .......... .......... .......... 275 GGAACGAGAC CCCCTCGACG GTCCGTCGTG CCCACGACGG TCCGTCGTGC CCACGACGGT 55925 .......... .......... .......... .......... .......... .......... 275 CCGGGATCCG TCGACCCAGA CAGCTATTAC CAGAATAAAC TCTACTGCTC AAAACGACTA 55865 .......... .......... .......... .......... .......... .......... 275 ACAGGTCGTT ACACCTACTT TTATTTTTGG TTGTCTGGTT ATTCAACAAT GTAAAAGTGT 55805 .......... .......... .......... .......... .......... .......... 275 TTGCGTTTGA CCAAGATGTA ACATGTGAAC TTAAGTGCAC GGTTTATTTG GTTTGTCACC 55745 .......... .......... .......... .......... .......... .......... 275 TTGTTTCTAA GTGATTTTCA ATGTTTTTTC TTTTGTGTCA AATCTTAACG GTTAAATTGA 55685 .......... .......... .......... .......... .......... .......... 275 TAATCGAACC GATAACGATT AAAAGCTGAT AAATCAATAA CCGATAATTC AATATCTTAA 55625 .......... .......... .......... .......... .......... .......... 275 TGGTTTTATA ACGGTTTAGC ATCTCCACAA ACCGATAACC AATAAGACAA CCCGATAAAC 55565 .......... .......... .......... .......... .......... .......... 275 TTCAAAATCG AATCGAACCG ACCGATACAC AGCCCTACAC GTCGATATAT TGCATGACAT 55505 .......... .......... .......... .......... .......... .......... 275 AAGAAACTGG TCACGAACTT TTATAGAAGT ATGAGACTCT TAATAAAAAG TTGAAATAAG 55445 .......... .......... .......... .......... .......... .......... 275 TGTTGAAAAC ACTTCTAAAC TTGATGAAAA ATTAAAAGTA TATTATATTC GGGTTGCAAG 55385 .......... .......... .......... .......... .......... .......... 275 ATTAGGGGTG TGTTGAAGTT TAGTCAATCA AGTAAATTAA AGGTTCTTTT TTTTAAAAAT 55325 .......... .......... .......... .......... .......... .......... 275 TGTTAATAAT TCAAAAAGTA AAACTAATGA TTTACATATA ATTTAGAAGT GTTTCCAATA 55265 .......... .......... .......... .......... .......... .......... 275 CTTCCCTCGT TTAAAGATAC ATGGGAAGAT TTTTCAAAAT GTTGAATGAT TTACATGGAA 55205 .......... .......... .......... .......... .......... .......... 275 ATTAATAAGT GTTCAGCATT CGGTCATTTT GCATTTTTCT CTGTACAAAT TCAGACTGCT 55145 .......... .......... .......... .......... .......... .......... 275 TCACACATCA TACATGTGAA AAACTAGTTC TCGCTCATTT TTTTTATGTT TAATTATTTT 55085 .......... .......... .......... .......... .......... .......... 275 TAACGACAAT TCAGTAACAG TGACAGTTAA AAATTTCATA AGAATGTTTA AGAATTATAT 55025 .......... .......... .......... .......... .......... .......... 275 AGGTAAAAAA CAATTAACGA ATGAATACAT TAAAAAATTG TAAATTATAC AAAGTAATAT 54965 .......... .......... .......... .......... .......... .......... 275 AAATAATTAT TATTTTTAAT TAAAAATAGG GATAAGATAT GAATATCCCT AAATTATGAC 54905 .......... .......... .......... .......... .......... .......... 275 CGAAATTTCA GATATATACA GTAACTAAAT TAAAATCTTA TTATCTATGA ATCCATTTTT 54845 .......... .......... .......... .......... .......... .......... 275 TTTTTGTAAT TTTATACATT TATTTATTAA CGTATTCAAA AATTTAGTTA AGTTTTACTT 54785 .......... .......... .......... .......... .......... .......... 275 TATACAAAAA TTATACATAT CTATAGGAAG ATTTATCAAA TATATGTAAT ATGTGGCCCC 54725 .......... .......... .......... .......... .......... .......... 275 GAATATGTAT TTTTGCTTGT ACCCAAACTT TTATTCTTCA ATTTACGTAA ATAAATAAAA 54665 .......... .......... .......... .......... .......... .......... 275 TTTTGAATTA TACGTGGACA CATACATTAA TGTATATGCT ACGTTTAGAA AAATATATTT 54605 .......... .......... .......... .......... .......... .......... 275 GGTAGGTCGT TATTTTTCAC ATAAAAGACA TTCTGTTTAT AATTTTTATT TTTTTTAATA 54545 .......... .......... .......... .......... .......... .......... 275 TCATCTTTAT TATCCGATAA CAGTAAGATG GCTTATTAAT AGATATATTT ATAGACTATA 54485 .......... .......... .......... .......... .......... .......... 275 TCACAACAAT TATCTAATAG ATGTCCTGAT GGTATAAATA CACCTAAAAC ATAAAGTCAC 54425 .......... .......... .......... .......... .......... .......... 275 GCTTCTGAGC CTACACTTAG ATGAGACGGA CACTCGAGAA TCATTATTGG CCTCAAACGA 54365 .......... .......... .......... .......... .......... .......... 275 ATTCTTGGTC TGACTTATTT ACTCAACGAA AGACTTAAAA CATAAAGAAA AATATTCAAA 54305 .......... .......... .......... .......... .......... .......... 275 TGCTAAATAT CTCAACTATC TCGAACTTAA TGCATGATGT TTTAACATTA AACATTTAAC 54245 .......... .......... .......... .......... .......... .......... 275 TTAGCTAAAA TGACAACTCA AGTATGAACA TAATTAAATA ACAAAAAGAT AATAAATGGA 54185 .......... .......... .......... .......... .......... .......... 275 CTAACATCTG ACTGCAAACT ATGAAGCCTC TAAAACAATT GAGATGGATG TTAGGGACAA 54125 .......... .......... .......... .......... .......... .......... 275 ACCCGATGAC ATCCTAATGA ACTAGTAAAA TCACTGAAAG CAATAAATTA AAAGAGTCCT 54065 .......... .......... .......... .......... .......... .......... 275 CTGGAATACA AGGAAGTTCA CTAACTGACT CTAGAGTGCT CACTGGATCA ACGGTGTGCT 54005 .......... .......... .......... .......... .......... .......... 275 GCGTGCTGAT TATGATTACC TGTGTTTGCA TCATAATATG ATGCAGGCCA ACTAATATCA 53945 .......... .......... .......... .......... .......... .......... 275 ATAAATTGAA TACAAGAGTA TGCGAGTTGA AATACTAAAA CAAGACATAA GCTTGGAAAG 53885 .......... .......... .......... .......... .......... .......... 275 AGTCCGAAAG AAACACTTAC CTAGCCTTTA CTTAAGTAAA CTGAACTCAA CTAATTTCAA 53825 .......... .......... .......... .......... .......... .......... 275 TAGAAAGCAA TGTAAATAAA TGCAATACAA AGAAAAGCTT TAAAACATGA ACTTTAATTC 53765 .......... .......... .......... .......... .......... .......... 275 TGTTTATTTA GAAACACAAT GATAATGGCG TATATATGCA AAGATACAAT ATGAACTCTA 53705 .......... .......... .......... .......... .......... .......... 275 TTTGTATATA AAAATATAAT TATATCTGAC GTATATAAAA ATACAAAATA CTATTGTGGG 53645 .......... .......... .......... .......... .......... .......... 275 TAAGGTTGGA CAACGGACCG GGTTGTACCG ATACCGGTCC GATTCGGTTG CCTACGGAAT 53585 .......... .......... .......... .......... .......... .......... 275 GGAATAAGAC ATCGTGAATC GATATGAGGA ACGGAATGGA ACCGCAATTT GGTACCGCTG 53525 .......... .......... .......... .......... .......... .......... 275 TACGGTACCG ATTTATCCCA ATTTATTTCG ATTCTGATCC GATTCCAATT AATTATTATT 53465 .......... .......... .......... .......... .......... .......... 275 TATTAATTAA CGTTTACATC CCTACAAATC CGTCCAACCT TTTTTTACCT CATAAAGCCC 53405 .......... .......... .......... .......... .......... .......... 275 TAAATAGAAA AAAAATAATT ATATGTAATA GGCTCAAATT TTGTGGGCTT GGAATTGTGG 53345 .......... .......... .......... .......... .......... .......... 275 CCTTAAATTA TCTATCAACT GTGTATGTAA AACTCACTCG TATTTAAATA ATTTTCTAGA 53285 .......... .......... .......... .......... .......... .......... 275 CTGTGCTAGA AATATAAAAT AAATGTTAAT AAATGTAACA AATAAAATGA TTATAAAAAA 53225 .......... .......... .......... .......... .......... .......... 275 ATAAATGTAA TAAATATACT AATGACGTGA ATTTAACAAA ATAACAACCT AATAAAAAAT 53165 .......... .......... .......... .......... .......... .......... 275 GATAAAATAT TTGAACATAT TTAACCGGTT GTGACGAAAA TAAGGTAATT TAAATTTATC 53105 .......... .......... .......... .......... .......... .......... 275 AGAAGAAAAT ATTCTAAAAC TTGACAAATG AGGAGAGTTA TCGATAAACT TATTTATTTA 53045 .......... .......... .......... .......... .......... .......... 275 AAATTATAAA AAAAATCATT TTGAACTATT AAATAAATAT AACTTTAAAA GTTACAAATT 52985 .......... .......... .......... .......... .......... .......... 275 TTGAAATGTT ATAAACTTAA GTAAAAAATT AAATTATAAA TTTAAAAACT ATTAATTTAA 52925 .......... .......... .......... .......... .......... .......... 275 ACTTAGAAAA AATAAAAAAA ATCATAATTT CGTAATTTTA AAAAATATTT TTTGAAATAA 52865 .......... .......... .......... .......... .......... .......... 275 CTAAATGTGT CGTCCCGTTT ATCCCATCCA GTTTCATTCC TGTTTCATCC CGGTATATAG 52805 .......... .......... .......... .......... .......... .......... 275 TGGGACTAGA CGAAATCAAG TATTCGTCTT GATAATTCCG GTCCGGTTCA TTTCGGTGTC 52745 .......... .......... .......... .......... .......... .......... 275 GGTCAACGAA CCGGTCAACT CGTTCCGTTT CGGTATAGTA CCGATTCGTG CCGGTCCAGT 52685 .......... .......... .......... .......... .......... .......... 275 GGTTCCATTC TGATCCGTTG CTAGTCTTAA TTGTGGGAGT TTCTTTAACC GACAATCATC 52625 .......... .......... .......... .......... .......... .......... 275 ACTTAAGAGT TATATTGATG ATACAGTGTC TCGCTCATGC TTCCAAAATT GTCATATACT 52565 .......... .......... .......... .......... .......... .......... 275 TTGTCGTCAT ATAAGACGTC TTTACTAAGT GGATCCACTA GTCTATGCTA AAAAACAATA 52505 .......... .......... .......... .......... .......... .......... 275 AGAAATCATC TAAAAAGTAT GGTCCTTTCT ATCCATAATG GCTACATGGT TTTAGGGGGT 52445 .......... .......... .......... .......... .......... .......... 275 TGTGAGTTAT ATGAACTCTC CTTCATATCG GTGTTCAATA CTACTCCCAA AATATACTAG 52385 .......... .......... .......... .......... .......... .......... 275 CTCTTTATGC TTAGAAGCAT AACTTCTTTC TATGGTTTGA GATAATTGCT CAAAGACTTA 52325 .......... .......... .......... .......... .......... .......... 275 GCTTAGATGT TATCTTGAAA ATCTTAGTTT CCTCTCTAGC TTAATTGTAA AGCATTTACT 52265 .......... .......... .......... .......... .......... .......... 275 CTTTAACTGA AAACTAGCTC AAAGGCTCTT TTGAAAATCT TAATTTCCTT TCTTATTGAA 52205 .......... .......... .......... .......... .......... .......... 275 ATGTGAAAAC ATTTATTCTT TATTGAAAAA CTAGCTCAAA GGCACTTTTG AAAATCTCAT 52145 .......... .......... .......... .......... .......... .......... 275 TTCTTTTCTT GTTTAAATAT GAAAACATTT ACTCTTTTGG AATACATAAT CTCCATATAC 52085 .......... .......... .......... .......... .......... .......... 275 TTTTGAAGAA ATGAACTTCA ATTTTACTGT TTATTGAACT CAAAACTCAA GTCATAAAAC 52025 .......... .......... .......... .......... .......... .......... 275 AAAGTTAAAA CATTTGTAAA AGACTTCTAA AAACTTTATG AACTGCTCTT GACTTGACAC 51965 .......... .......... .......... .......... .......... .......... 275 TTAACTTCTC TTGACTTGGC TTGTAACTTC TCTTGACTAG ACTCTTAATT TTTCTTGACT 51905 .......... .......... .......... .......... .......... .......... 275 TGAATCTTAA CTCACCTTGA ATTTAGTTTA TGGATTCAAG GATCATGATT TGTGATAGGA 51845 .......... .......... .......... .......... .......... .......... 275 AAGATCTCAT GATGTGTTGG AATAATTTTA GATAGTTAAT CATGAGAAAC GATCAAGAAA 51785 .......... .......... .......... .......... .......... .......... 275 TCACTACTGG AAAGCTGCTT CGCAAAGCAG AGATGTAATT CAATTTTGGT GGCGAAAATA 51725 .......... .......... .......... .......... .......... .......... 275 CTTTTGAGGT AGAAAGGTCT GTGATCGCTC TGCGAAAACA CAAATTTTCA AAATGCAGAA 51665 .......... .......... .......... .......... .......... .......... 275 TGGGTTCGAC GAAATTTCTT CTTCGCTTTT CAACTCTATA CCCTCTAAAC TCGTGGATTC 51605 .......... .......... .......... .......... .......... .......... 275 TTTCCCCAAA CACTTCGAAT GGATTATATG ATTAAAGTAC ATCAAATTCT ACAGAAAATC 51545 .......... .......... .......... .......... .......... .......... 275 AAACCTAAAA TCATGTATTC AGATTGAACA ACTCCTCAAC AATTTCAATG AATCAAGAAT 51485 .......... .......... .......... .......... .......... .......... 275 TTAATATAAC TACAACAAAT CCATCATGAA TTCAATTTCT AAGCTTTTAA GAACTTAAAA 51425 .......... .......... .......... .......... .......... .......... 275 CGCTGAAATA AATCATGATT GGCGCGTGAG TGAACTAACC CAGCGCTATG TGTAGTGGCG 51365 .......... .......... .......... .......... .......... .......... 275 GATCCAGGGT TTCTTAGTTA TGGGTGTTTA ACTATTTGTA ATTTGAAGTT GGTACCAAAA 51305 .......... .......... .......... .......... .......... .......... 275 TGGGTGCTCA ATTTACATAT TCATACAAAT TATATTACTG TTGTCTCCAA ATGTAATGGG 51245 .......... .......... .......... .......... .......... .......... 275 TGCTGAAGCA CCCATGCACT TGAATGTGCA TCCGCCACTG GCTATGTGAA CTCACATACC 51185 .......... .......... .......... .......... .......... .......... 275 TTGTAGGGAT CACCCCCGAC GAAATCCACA AGCAAAACTC GATGATCTTG TCGAATCTTG 51125 .......... .......... .......... .......... .......... .......... 275 CTTCTTTTCT CTTTTCTCCT TTCTCCTCTT CCTAGAGTAT TTTTGTAAAA GTGTAAACTG 51065 .......... .......... .......... .......... .......... .......... 275 ATCTAATTTT ATATAGACCC TAACTTAATC ACCAAAAACG AAATAAATTA ATTGGGCAAG 51005 .......... .......... .......... .......... .......... .......... 275 AAAAAGACTG AACTACCCTT TAAAATTCGG ATGGGGCCTC CTTATTCCAA CATCCTAACT 50945 .......... .......... .......... .......... .......... .......... 275 TTCAAAAGGC ATAATTTTCT CAAACGAACT CGAAATTGTG CAAACTCAGT GGTGTTAGAA 50885 .......... .......... .......... .......... .......... .......... 275 AGATTATTCT AAGATCTTTT CAAACATATC AGAAAGTACA CTAACTCATC ATGAGTTAAG 50825 .......... .......... .......... .......... .......... .......... 275 ATTTATAGCC GTTTGAAGTT GACCAAAAAC CTCACTTTAC TTAACTTAAA CAAATTTTCA 50765 .......... .......... .......... .......... .......... .......... 275 GATTTTTTTA TTATTTCAAA AAATAACTAT TTTCAGTTTT TAGCTTCTTT TTAACTATTT 50705 .......... .......... .......... .......... .......... .......... 275 CAAATTGCGA GATGTTATAA ACACAAAATA GATTTAGCAG TAAACATTTG GATTTTGAAA 50645 .......... .......... .......... .......... .......... .......... 275 GGAATAAAAG CACTTTGATG CTGGATCTTT AAAAAAATTG AAAATAACGT AAAATCAGAA 50585 .......... .......... .......... .......... .......... .......... 275 GTAGCAGTAA ACATTTAATT CTGGAAGGAA AATAAAAGCA GTTTGCTGCT GGAATATTTT 50525 .......... .......... .......... .......... .......... .......... 275 TCTCTTGCAG ATATTAGTAA TAACAACTTA TTATAATTAT TTTATTTACT TCTTAGGCAA 50465 .......... .......... .......... .......... .......... .......... 275 AATAACGAAG TCAATGAGTA CGTGTACGCT AATATCTGAA TGGTTACTCA ATGTAGAATA 50405 .......... .......... .......... .......... .......... .......... 275 GTTCATTAAC TCAATTTTAT TTTATTACTT GAAAATCATT TAATTAGGAA TACACTTAAT 50345 .......... .......... .......... .......... .......... .......... 275 TTTACTTTAT AATTTAAAAA TTATTTAACT ATTATTATTT CACTTACAGT ATCGTTAAAA 50285 .......... .......... .......... .......... .......... .......... 275 TTGGTTAAGA AAAAAAAATG ATAAGGAATG TAGGCTAGCA AGAATGTTGG TGACTGAAAT 50225 .......... .......... .......... .......... .......... .......... 275 CCCCTATTAG GACTAACGTG GCAGCAAAAT TCTTAGGTCA TTGGACCTAA TTTATGTAGT 50165 .......... .......... .......... .......... .......... .......... 275 TTAACTAAAT TTCTCACTCA TTTTGTTAGT GACAAAATCA ACTTTAATTT TTACTAAGAA 50105 .......... .......... .......... .......... .......... .......... 275 TTAATTTTTA TTTTTATTTT TCAAACAATT TTTAGTATCT AATAATTTAT TATTATTATT 50045 .......... .......... .......... .......... .......... .......... 275 ATTATTATTA TTATCATTAT TATTATTATT ATTATTATTA TTATTATTAT TATTATTATC 49985 .......... .......... .......... .......... .......... .......... 275 ATCATCATTA TTATTAGAGA TGTCAAAATA GATTTAGCTC ATAGAGTTGG CGAAATTCAA 49925 .......... .......... .......... .......... .......... .......... 275 TTTGTTATTA TAGGTAGAAT TGTAAAAAGA TTCTTCAAAC CTATTTAAAA TTGGAGTTTA 49865 .......... .......... .......... .......... .......... .......... 275 TAAGTTCGAT TCATATAAGC CTTGATCTTT GGACCTTCAT CAGTATTGTT CATGAGTCAG 49805 .......... .......... .......... .......... .......... .......... 275 AACTATTTAT TTAATGATAA CTTGTAGAAA TCTCACTAAT GTATGAGTTA ATTACTTAGA 49745 .......... .......... .......... .......... .......... .......... 275 TGTACATTAT ATTGTAATAT TAAGAATTTT ATAAATTTCG ATGCGTTTAG AAGACTTAAA 49685 .......... .......... .......... .......... .......... .......... 275 ATTAGGTGTA ATTTGTTCGA GATATATACT CTATCTAAGT GGATTTGCAT GTATCTAAGA 49625 .......... .......... .......... .......... .......... .......... 275 TATATAAATA AATTTCGTGT TGAGCCTTCC TCTCATCTCC CTCGCCACCT CTTATCTCGC 49565 .......... .......... .......... .......... .......... .......... 275 TTGCATATTT AGGATGTTTC ACATCAGATA TATGCATCTT GCTATCTAGC ATCCTAGATA 49505 .......... .......... .......... .......... .......... .......... 275 CATGTTAAGC ACACTAAATT TTTTGCTAGT GTTATTAAAA CATTACATTT GTTTGTCATA 49445 .......... .......... .......... .......... .......... .......... 275 TTTGCTTTTA AAATTTTATT ATTTTCTTGA AGTTATAGAA TTTCAAGTTT GAAAAAAGGC 49385 .......... .......... .......... .......... .......... .......... 275 TAGTCCACTC CAGCCTGCAG CCCTTCTAAA ATTGGGTAAG ATTAAACATT TTTAGATCCT 49325 .......... .......... .......... .......... .......... .......... 275 TCCAAATTAA TGAAAAATCG ACCCACCCAG GCTATCAAAT TTTTGGACCT ATAATGTTTG 49265 .......... .......... .......... .......... .......... .......... 275 AACTGACCTT TTTTAACAAC TCTAATTATC TCATGAATCT ATTAGAATTA CATATTAATA 49205 .......... .......... .......... .......... .......... .......... 275 ATTATTAATA ACTTAGAATG GATTGATGTA ATAAAGAAAC ATATCAAAAT CCACCAAACT 49145 .......... .......... .......... .......... .......... .......... 275 TGAACAAATT ATAACAATTG AATCGATTGA GCTTGACTTT GACATCCTTG AGCACATAAA 49085 .......... .......... .......... .......... .......... .......... 275 ATCTAGTATA CCTTTGTCCT TTTTTACTTG TTAAATTTAA TTTTACTTGT TCCTTTTTAC 49025 .......... .......... .......... .......... .......... .......... 275 TTGTTATTTT ATACAAATCA AGAAAAAGTA CTACATATAT TCAATAATAC CTATTCATTA 48965 .......... .......... .......... .......... .......... .......... 275 TTGACTTTAT ACATTTCTTA TAAATATTAT AGAAATAGAA CTATAAATTT ATTATATCAC 48905 .......... .......... .......... .......... .......... .......... 275 CCTTTTTTAA ATAATATATA CAATATCTTA AAAAATGTAT TAGAAAAATG ACTATAATTA 48845 .......... .......... .......... .......... .......... .......... 275 ATTATTATGA TAAATTAGGA ACTAGGTGTA AAATTATCCA TTAAAATCAT AAGGTAGATA 48785 .......... .......... .......... .......... .......... .......... 275 AATACTTTTA AATATTTCAA AATAGGATAG TGGACAATTA TTATTCAACG GAAAGAGTAT 48725 .......... .......... .......... .......... .......... .......... 275 ACCTATTATA CTTTAATTTA TTTACGGAGT TAATTCATTT TAAAAAGTGA AACCTCTCTA 48665 .......... .......... .......... .......... .......... .......... 275 ATAAATAAAT TGATTTTGAA ATATTGATCT ATTAATAAAG TTAAAATGAT AAATTTACCG 48605 .......... .......... .......... .......... .......... .......... 275 AGTTAATTAT TATTTTTTTA ATAGAAAGAC TAAATAAAAA ATGAACTGAT AAAATAGGAA 48545 .......... .......... .......... .......... .......... .......... 275 GAGTAAAGAA TCCGTACTGA ATATTTATAC CAAGCTAATA CATACGTGTC ATATTTATAA 48485 .......... .......... .......... .......... .......... .......... 275 TTTATTTTAC TTTATTAAAT CATATACTAA TAAAAAACAC ATTACTTTAA TATCAACACT 48425 .......... .......... .......... .......... .......... .......... 275 CAATACAAAC AATTTTTTTC CTTTTTGATA TGGATGCCAA AATACTTGTT TACTCCGCAA 48365 .......... .......... .......... .......... .......... .......... 275 ATTGTTGTAT AGGGAACTCC ACAAATTTCA ACTTCTATTC ATTATTTAAT ATTTAATAAT 48305 .......... .......... .......... .......... .......... .......... 275 CTTCCATGCA TAGAACTTTC CAAAGTACTT TTTTGTTTTT TTTTCAAATA CCCTTCCTTT 48245 .......... .......... .......... .......... .......... .......... 275 CACTAACGTA TAAGTTCCAT GGCAGAAATA AAACACCAAA TACATTAATT TATCTTCTAA 48185 .......... .......... .......... .......... .......... .......... 275 TTTTTTCATT TATTATTAAA CAATGGCAAA GTCATTTACT TCTACGCTAG AAATCATATA 48125 .......... .......... .......... .......... .......... .......... 275 TTCTGTTTTG AATGCAATGT ACTAGAGATA TACAAAAGGA AGTACACAAA TATATATATA 48065 .......... .......... .......... .......... .......... .......... 275 ACAATCAATT AAGTGTTCTC TTTTGTCCCT ATTTATTTAC TAAATATTTT CTTAATTTAA 48005 .......... .......... .......... .......... .......... .......... 275 TTTTTCTTTT ACTTGTTATT TATAACATAT AAAAAATATT TTTTTTTCTT TTTGTACCAT 47945 .......... .......... .......... .......... .......... .......... 275 TTTTTTCTTT TTATACCCTT ATATATTACA TTAAGTTATT CTTTTTGACA AATATAGTAA 47885 .......... .......... .......... .......... .......... .......... 275 ACAGTTAGGG ACTTTTGCAA ATAGTATTAC AATAAATTTA ATTATGTTTC ATAACTATAA 47825 .......... .......... .......... .......... .......... .......... 275 TTTGCATCTT TATGGGTTGT AGCTCATTTA AGCTATCTCA TTTGTATAAT TTACAGATTT 47765 .......... .......... .......... .......... .......... .......... 275 ATATAATTCA CAGGTTTATA TAATTCTCGG GTATATTTGT TTAATTCAGT TATTTTTGTA 47705 .......... .......... .......... .......... .......... .......... 275 TAAACTTAAA ATAACGAATT TATACAATTA CAAATATTAA AAGTGTAAAT AATTATACAA 47645 .......... .......... .......... .......... .......... .......... 275 ATTATGAATT AGACTAAAGT TATATAAACA TATTATACAA ATTTTTGAAT TATACAAACG 47585 .......... .......... .......... .......... .......... .......... 275 TGTGAATTAT ACAAAACTAA AAAATTGACC TGCACAATGA TAGCTAAAAA TAAGCTGCAA 47525 .......... .......... .......... .......... .......... .......... 275 ATTATAAGTA AGACAAACTA TAACTATGTT AAGTGATTAA CTATTATATA TTTGCTTATA 47465 .......... .......... .......... .......... .......... .......... 275 CACATAATTT TTTTAAAAAA AATATTTTTG AAACTCAATC GATAAATAAT ATATTTACTA 47405 .......... .......... .......... .......... .......... .......... 275 TACCTTTTTT TTTTTGATGC CAAGTCAAAA TCTAACACAT AAATAGGAAT GAAGAGAATT 47345 .......... .......... .......... .......... .......... .......... 275 GTTATTACTT GCATTTATTA GTAGGACCAA AATAAGTTCT TAGTAATTAC CAATATATAT 47285 .......... .......... .......... .......... .......... .......... 275 GATTTCTAAT TTTTTTTAAA AAAAGAATGG AATAGTTTAT AGCGTGTTAA GTAGGGGTTA 47225 .......... .......... .......... .......... .......... .......... 275 AGAAGTTAGT TTTATAGCTA TTTTTATTTG TTCAATAATA TTAAAAATTA TACTTTTTTT 47165 .......... .......... .......... .......... .......... .......... 275 GTTTTGTTTT GTTTAGTTTG GTACTTTTTG ATTGTGGAGT AATAAATAGT GCGACAAGAG 47105 .......... .......... .......... .......... .......... .......... 275 TGTAACCTCT TTTCAATTTT CAAGCTTCCT ATTTTGACTA TCCACTCAAA ATTAGCCACG 47045 .......... .......... .......... .......... .......... .......... 275 TCATCAGTTG CACATATAAC TCCCTGTACC TCTCCACACG GAATCAAACC GTGTACTTCT 46985 .......... .......... .......... .......... .......... .......... 275 TCCTTTTCAA CATTTTCCTT TTTAAAGAAA AAGTCATCAT CTTCTCCATA AATAAATATT 46925 .......... .......... .......... .......... .......... .......... 275 TTTCCATTAT TTTCTCAACA AAAACCCCAT TCACAAAAGC TTCATTCTTC AATTTTCACA 46865 .......... .......... .......... .......... .......... .......... 275 TAATTTTTTT TTCTTCATTT GATGGAATCT TCGTTGCCGG TGGAGGAGCT TACTTCCGGC 46805 .......... .......... .......... .......... .......... .......... 275 GCAAGTGGTC GGATAATTCC TCTTTTCAAA AATCTTCACC GGTCAGTTTT CTCATACCAA 46745 .......... .......... .......... .......... .......... .......... 275 ACTTACCGGA GACTAATTAT ATTTATACAG TCTATTTTCC TATGGGTAAT TCTTCTGTCT 46685 .......... .......... .......... .......... .......... .......... 275 CGACGGAGGT TCTCCACGTC ACCTTCGTCT CCTCCGCCTT CGCCATCTGC AGCTACTACG 46625 .......... .......... .......... .......... .......... .......... 275 GCGGTGTTGG GGAAGAGGAG GAAATTTGCT TTGCGGAGGG ATGAAGAGGA TACGCAGAGA 46565 .......... .......... .......... .......... .......... .......... 275 AGGAGGGCTC TTGCTGAGGC GTTAGATATG ACGGTTGAGA ATGACGGTGT GAGCTGCCGT 46505 .......... .......... .......... .......... .......... .......... 275 TGGAATACGT CTTTGTTCTT TGGGGCTCGT CGGAATGCTT TGTTTTGCCG ATCGTGGTTT 46445 .......... .......... .......... .......... .......... .......... 275 CCGGTTACAG ATGAATTGAG GTAGGTTCAT TTTCGAAATA TTGTTATGTT TGTTTTTATA 46385 .......... .......... .......... .......... .......... .......... 275 AAGATAGAAT TGAGGTGAAG GGGTTTGTAG AAGGTTGATG GTTTATGTAT AATATAAGCA 46325 .......... .......... .......... .......... .......... .......... 275 AGTCAATTTA TGATAAAGCA TGAATAAAGA GGATTCATAC AGGTAATTAA TTTGGAATTG 46265 .......... .......... .......... .......... .......... .......... 275 AGTCATACAT CATGTTTATT AATTTTGCAA TCACGGGTGT GTGGAGGTAT GGGGATCTAA 46205 .......... .......... .......... .......... .......... .......... 275 TATATGGGAG GAAAAAACCG AATTGAACGA ATGAAGGTGT GGCCTAGTGC TCAATAAAGT 46145 .......... .......... .......... .......... .......... .......... 275 GGATTGAGTT CTTAGGTTCA AAACACTAGT GATTTCTTCC CCGTGTTTTA GCCTTGTGCG 46085 .......... .......... .......... .......... .......... .......... 275 CACAAGCTGG TCTGGACGCA AGGGTTATCA AAATAAGACT TTGATTTTGA TACTAACTTG 46025 .......... .......... .......... .......... .......... .......... 275 GCAAAGAATT GTTCCTTCGT CGTGTTTTGG GGGAATGGGG TGAATTGGGA TATGGTTATT 45965 .......... .......... .......... .......... .......... .......... 275 TCAGCATTGA AGTATGGAAA ATATAACTGC ATGGGTTCAT CACCCCTTGC TGACTTTCAT 45905 .......... .......... .......... .......... .......... .......... 275 TTACCTCAAG TACAGAAGGC AGTTAAGCAT ACCCAATGAA ACTATTTTTC ATTTCTATGT 45845 .......... .......... .......... .......... .......... .......... 275 TAGCTTTACC CCATGTGATT TATTTGACTT GATTTTATTA ACAGATATAC TAGGGATGCT 45785 .......... .......... .......... .......... .......... .......... 275 CATTTTCAGT TTTTTCTGAT AAATTACTCT CCTTTAACAA GAAAATTGCA AGTATTTGAA 45725 .......... .......... .......... .......... .......... .......... 275 GTGATAATTT GTACATGAGT ATCTTATTTT GTTTGTGCAT GGTCGTTTTA TATTGCATAT 45665 .......... .......... .......... .......... .......... .......... 275 GAGAACAAAT AGACATGAAT TTGATTGGCA AGTTAAGAGC ATTAATATTG AGTTTTTAAA 45605 .......... .......... .......... .......... .......... .......... 275 ATTATTCTAC TTTGCTAGGA CATGAAATGC AAGCCAGAAT CTACCAGTGA TCAAATGTGT 45545 .......... .......... .......... .......... .......... .......... 275 TTTACTGCTT TCATCAGGAA AAAGGCTTAG GTTGAATTTC CTAGACTTGG CTTCACGTTT 45485 .......... .......... .......... .......... .......... .......... 275 TAGACAATTC CTCCTTAAAT CCTTTAAGGT AGA-GTGCTA TCTTAGAA 45438 || | |||| ||||| || .......... .......... ........GT GCACTTGCT- TCTTACAA 294 hqPGS_C08HBa0294K15.1-_SGN-U316028- (57542 57322) ******************************************************************************** EST sequence 12 -strand 897 n (File: SGN-U335073-) 1 TTTCCCCGTC AAGCTTTAAT CGGNNGGCTC CCTTAGGGGT TCCGATTTAG TGCTTTACGC 61 CACCTCGACC CCAAAAAACT GATAGGGGTG ATGGTTCACG TAGTGGGCCA TCGCCTTGAT 121 AGACGGTTTT CGCCCTTTGA CGTTGGAGTC CACGTTCTTT AATAGTGGAC TCTGTTCCCA 181 AACTGGAACA ACACTCAACC CTATCTCGGT CTATTCTTTT GATTTATAAG GGATTTTGCC 241 GATTTCGGCC TATTGGTTAA AAAATGAGCT GATTTAACAA AAATTTAACG CGAATTTTAA 301 CAAAATATTA ACGCTTACAA TTTGCCATTC GCCATTCAGG CTGCGCAACT GTTGGGAAGG 361 GCGATCGGTG CGGGCCTCTT CGCTATTACG CCAGCTGGCG AAAGGGGGAT GTGCTGCAAG 421 GCGATTAAGT TGGGTAACGC CAGGGTTTTC CCAGTCACGA CGTTGTAAAA CGACGGCCAG 481 TGAATTGTAA TACGACTCAC TATAGGGCGA ATTGGGTACC GGGCCCCCCC TCGAGCCACA 541 GCCCCAGTGG CTGGCTCAGT TGTTTCTTGT CTGGCCGGTG TTGGTGTTGA CGTGGTCGTT 601 GCTCTAGTTC TAACCATCTG CAAAAGAGAG TGAAGATGGT CAGATACCAA TTTGTATCGC 661 CTAGATACCA ATTGGACTCA AGTAGTAGCA CGAAAGAAAG AATGAAAGGG TGAAATTTTC 721 CTAAAGTCTT ATAGCCTCTC AAAGAAAAGT AAAGGCGTCC CCCTACCGTT CCTAAAGACT 781 CTACTAGACC TGTTCTTGTG TGATGAGACC AACGAACCTA ATCCTCGTGC CGAATTCCTG 841 CAGCCCGGGG GATCCACTAG TTCTAGAGCG GCCGCCACCG CGGGGAGCTC CAGCTAT Predicted gene structure (within gDNA segment 64030 to 56384): Exon 1 58029 57734 ( 296 n); cDNA 523 822 ( 300 n); score: 0.872 MATCH C08HBa0294K15.1- SGN-U335073- 0.872 296 0.330 C PGS_C08HBa0294K15.1-_SGN-U335073- (58029 57734) Alignment (genomic DNA sequence = upper lines): GCTCATCTTC GAGCTACAAC CCCAGTGGCT GGCTCAGACG CATCTTGTCT TGCCGGTGTT 57970 || | | || |||| ||| | |||||||||| ||||||| | |||||||| ||||||||| GCCCCCCCTC GAGCCACAGC CCCAGTGGCT GGCTCAGTTG TTTCTTGTCT GGCCGGTGTT 582 GGTGTTGGCG CAGTTGTTGC TCTAGTTCTA ACCATCTGTG AAATAGAGTG AAGATGGTCA 57910 ||||||| || || ||||| |||||||||| |||||||| ||| |||||| |||||||||| GGTGTTGACG TGGTCGTTGC TCTAGTTCTA ACCATCTGCA AAAGAGAGTG AAGATGGTCA 642 GATACCAATT TGTATCACCT AGATACCAAT TGGATCCAAG TAAAAGCACG AAAG-AAG-- 57853 |||||||||| |||||| ||| |||||||||| |||| |||| || |||||| |||| ||| GATACCAATT TGTATCGCCT AGATACCAAT TGGACTCAAG TAGTAGCACG AAAGAAAGAA 702 -GAAAGAATG GAATTTTCCT AAAGTCTTAT AGCCTCTCAA AGAAAAGTAA AGGCGTCCCC 57794 ||||| || ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAAGGGTG AAATTTTCCT AAAGTCTTAT AGCCTCTCAA AGAAAAGTAA AGGCGTCCCC 762 CTACCGTTCC TCAAGACTCT ACTAGACTTG TTCTTGTGTG ATGAGACCAA CGAACCTAAT 57734 |||||||||| | |||||||| ||||||| || |||||||||| |||||||||| |||||||||| CTACCGTTCC TAAAGACTCT ACTAGACCTG TTCTTGTGTG ATGAGACCAA CGAACCTAAT 822 hqPGS_C08HBa0294K15.1-_SGN-U335073- (58029 57734) ******************************************************************************** EST sequence 41 -strand 916 n (File: SGN-U335419-) 1 GAGAAGTAAA ACACAGAAAA GATATGATCA ATGCGACACA AAAAGAGAAA GACCGTACAA 61 ATAATGTCAA ATCTGACATA TCAAACAGGT TAGTACATAT AATAACCACA GAGTCAGATC 121 TCTAGATTAC CTAAAAATGA AAAATAAGAC TAGTGTCAAT AGTTATGAGT TTCACGAATG 181 TGTATATAAT AATGACTAAT AAGGTAAGAA TGAATAGATA CTGTAAGTAG CAAAAGGAGA 241 AAGCAAAATT AAATGTAGTA GAGAAAGAAA CCAAACAAAA ATAAGAGACT AAAATGGATC 301 CCACATAGGT CGAGCAACAT TCACCAATAC ACAAACGAGA AATTATAGTG GCCGACAAAT 361 AAAGCCTACA GTTTAAAGGA GGGAAAGAGA AATTGATAAA CACTGAGGAT GATAAACCGT 421 GGTAAATGGC TGTTTGGTTA GGCACCTCAG TGTTGTAACC TTGCGGGCTT TCCTCAATGA 481 GAGTGGAAGC AGGTGCTTGA GCGGTTTTCC AAGGAAGGGG AGGGCGGATA TGATGTGAGC 541 AAGAGCTGAA AATGAATAAC ATTAGTCATA CTTTTAGCTC CTCCAAGCTC GGACACTCCT 601 TGGGAACTCT GGGGTCAGAA TTTGGCCGAT AGGTTTAAGA TTGATGTACC ATCTATTATG 661 TACTGTAATA GTTTCTATGA ATGCCATGTA GACTATTTAA TACCCTGTTT CTTGTTGTTC 721 TCCCCATCCT CCCCCTCTCT TACTAGCTCC TCAGTCGGTG GAGGAGTCAC CGCCCTAGCA 781 TCAGATGGAC TAGGTGCTCG TCCTCTTCCT CTAGAGGACG TTCTCTCACG ACCTCTACCA 841 CGGCCTCTTG CCGCTGTTCT CCCTCGAGGG GGGGCCCGGT ACCCAATTCG CCCTATANGG 901 AGTCGATGAC AACCAA Predicted gene structure (within gDNA segment 66217 to 56793): Exon 1 58174 58026 ( 149 n); cDNA 712 859 ( 148 n); score: 0.879 MATCH C08HBa0294K15.1- SGN-U335419- 0.879 149 0.163 C PGS_C08HBa0294K15.1-_SGN-U335419- (58174 58026) Alignment (genomic DNA sequence = upper lines): TTGTTCATCC TCCCCTTCCT CACCCTCTCT TACTACTTCC TCAGTCGGTG GAGGAGTCAC 58115 ||||| | | ||||| |||| | |||||||| ||||| ||| |||||||||| |||||||||| TTGTT-GTTC TCCCCATCCT CCCCCTCTCT TACTAGCTCC TCAGTCGGTG GAGGAGTCAC 770 CGCCCTAGTA CTAGATGGGC CAGGTGCTTG TCCTCTTCCT CTAGAGGACG TCCTCCCGCG 58055 |||||||| | |||||| | ||||||| | |||||||||| |||||||||| | ||| | || CGCCCTAGCA TCAGATGGAC TAGGTGCTCG TCCTCTTCCT CTAGAGGACG TTCTCTCACG 830 ACCTCTACCA CGGCCTCTTG CCACTGCTC 58026 |||||||||| |||||||||| || ||| || ACCTCTACCA CGGCCTCTTG CCGCTGTTC 859 hqPGS_C08HBa0294K15.1-_SGN-U335419- (58174 58026) ******************************************************************************** EST sequence 83 +strand 891 n (File: SGN-U335938+) 1 TGGAGCTCAC CGCGGTGGCG GCCGCTCTAG AATAGTGGAT CCCCCGGGCT GCAGGCTGTA 61 GTCTATGCAC ATTCAAAAAC TGCCGATCTT TACAACAAAA CCGGAGCACC CCAAGGAGAT 121 GCACTTGGTC TAATGAAGCC TTTGTTCAAT AACTCTTGAA GTTGTGCCTT TAACTCTCTT 181 AACTCTGCGG GAGCCATTCT ATAAGGGGGT ATAAAAATGG GGCGTGTGCC CGGTTCGAGA 241 TCAATACAGA AGTCAATATC CCTATCCGGT GGCATACCAG GATGATCTGC AGGGAACACA 301 TCCATAAACT CACGAACTAC TGAAACTGAG TCAATCGAAG GTACTTGGGT AGTGTTATCC 361 TTGAGATGTG CCAAGAAAGC TAAACACCCT TTACTAACCA TTTTCTTAGC ACGAAGAAAG 421 GAGATGATAC GCACCGGATT GGAAGTGTAG TCACCCTCCT ACACTAACAG ATCTGTCCCA 481 GGCTTGGCTA ACGTCACGGT TTTAGCATTA CAATCCAAGA TTGCAAAATT TGGAGAAAGC 541 CAAGTCATAC CCAGAATTAC ATCGAAGTCA ACCATTTCTT GCAAGGATTT TGCCGTAGCC 601 GCTACCTGTA ACGCTGAAAT CCGCAACTCT GACCTCAACC CTTTCACAAA ACGACGAATC 661 CTCTCTTGTG GACTGAAACA AAGTTGAGTG GCATATCTGG ATAGTGCACG AAACTTAGCC 721 TCATATGCAT TGACCTACAT CCTACCTTGC TATAGGNTCA AGAACTCATC CCTTTTCCTA 781 TNCCTCAAAG TCCGGGGGAT ATACTTCCTC ATAAACAGCT AGAGATGANG CCCCAGGTCA 841 TAGTGGTGCC TCCGTGGTGA CCCCCACCAT GTGAGTGCCA CTAACATTTG C Predicted gene structure (within gDNA segment 62329 to 55819): Exon 1 60159 59666 ( 494 n); cDNA 87 579 ( 493 n); score: 0.889 Intron 1 59665 58888 ( 778 n); Pd: 0.000 (s: 0.98), Pa: 0.000 (s: 0.78) Exon 2 58887 58573 ( 315 n); cDNA 580 890 ( 311 n); score: 0.802 MATCH C08HBa0294K15.1- SGN-U335938+ 0.855 809 0.908 C PGS_C08HBa0294K15.1-_SGN-U335938+ (60159 59666,58887 58573) Alignment (genomic DNA sequence = upper lines): TCTTCACAAA CAAAACAGGA GTACCCCAAG GGGATGCACT TGGTCTAATA AAACCTTTCC 60100 |||| || || |||||| ||| | |||||||| | |||||||| ||||||||| || ||||| TCTTTAC-AA CAAAACCGGA GCACCCCAAG GAGATGCACT TGGTCTAATG AAGCCTTTGT 145 CTAACAACTC TTGAAGTTGG GCCTTTAACT CTCTTAACTC AGCGGGAGCC ATTCTATAAG 60040 || ||||| ||||||||| |||||||||| |||||||||| ||||||||| |||||||||| TCAATAACTC TTGAAGTTGT GCCTTTAACT CTCTTAACTC TGCGGGAGCC ATTCTATAAG 205 GGGGTATGGA AATGGGGCGA GTACCCGGCT CCAGATCAAT ACAGAAATCA ATATCTCTAT 59980 ||||||| | ||||||||| || ||||| | | |||||||| |||||| ||| ||||| |||| GGGGTATAAA AATGGGGCGT GTGCCCGGTT CGAGATCAAT ACAGAAGTCA ATATCCCTAT 265 CTGGTGGCAT ACCAGAAAGG TCTGCAGGAA ACACATCCAA AAACTCACGG ACTATCGAAA 59920 | |||||||| ||||| | | |||||||| | ||||||||| ||||||||| |||| |||| CCGGTGGCAT ACCAGGATGA TCTGCAGGGA ACACATCCAT AAACTCACGA ACTACTGAAA 325 CCGACTCAAT TGAAGGTACT TGGGTAGTAT CATCCCTGAG GTGTGCCAAG AAAGCTAAAC 59860 | || ||||| ||||||||| |||||||| | |||| |||| ||||||||| |||||||||| CTGAGTCAAT CGAAGGTACT TGGGTAGTGT TATCCTTGAG ATGTGCCAAG AAAGCTAAAC 385 ACCCTTTACT AACCATTCTC TTAGCACGAA GAAATGAGAT GATACGAACT GGAGTGGGAG 59800 |||||||||| ||||||| || |||||||||| |||| ||||| |||||| || ||| ||| || ACCCTTTACT AACCATTTTC TTAGCACGAA GAAAGGAGAT GATACGCACC GGATTGGAAG 445 TGTAGTCACC CTCCCACACT AACGGATCTG TCTCAGGCTT GGCCAATGTC ACAGTTTTGG 59740 |||||||||| |||| ||||| ||| |||||| || ||||||| ||| || ||| || ||||| | TGTAGTCACC CTCCTACACT AACAGATCTG TCCCAGGCTT GGCTAACGTC ACGGTTTTAG 505 CATTACAGTC TAAGATTGCA AAGTTTGGAG AAAGCCAAGT CATACCCAGA ATTACATCGA 59680 ||||||| || ||||||||| || ||||||| |||||||||| |||||||||| |||||||||| CATTACAATC CAAGATTGCA AAATTTGGAG AAAGCCAAGT CATACCCAGA ATTACATCGA 565 AATCAACCAT TTCTAAGATA ACCAAGTCTA CATGAGTATT ACTCCCCATA AAAGTCACAA 59620 | |||||||| |||| AGTCAACCAT TTCT...... .......... .......... .......... .......... 579 GACAAGACCT ATACACCTTT TCAACTATCA CAGACTCACC CACCGGAGTA GAAACACGAA 59560 .......... .......... .......... .......... .......... .......... 579 TAGGCATGTC AAGCAATTCA CAATGTAAAT TAAGACCAGT AGCAAATGAG GAAGATACAT 59500 .......... .......... .......... .......... .......... .......... 579 ATGAAAATGT GGATCCAGGA TCAAATAATA CAGAAGCCAT GCAATCACAA ACCAAAAGAT 59440 .......... .......... .......... .......... .......... .......... 579 TACCTGTGAT AACAACATCA GATGTCTCCG CTTCAGACCT CCCAGGGAAA GCATAACAAT 59380 .......... .......... .......... .......... .......... .......... 579 GGGCCCTATC ACCTGTCTAT CCGTTGCCCC TACCATGTTG TGCTGCAGTC GCTCCGGCTT 59320 .......... .......... .......... .......... .......... .......... 579 GTCCGCCACC CCGGTTGATT TGTGTGACCA CCATTACCTC GGCCACCATG TTCTCCAGAA 59260 .......... .......... .......... .......... .......... .......... 579 TAGCGGCCTC TTCCATGACC ACCTCTACCC CTGACTATTG AAGGTCTGTA ACTCTGTTTT 59200 .......... .......... .......... .......... .......... .......... 579 GGACAATATC TCTTAATATG TCCAATTTCC CCACATCCAT AACACTCTCT GGGTTCGAGC 59140 .......... .......... .......... .......... .......... .......... 579 ATAGGTCTCT GTGAGAACGA CGGAGTCTGG GGATAACCTC CAAACTCAGA GAAATGTTGA 59080 .......... .......... .......... .......... .......... .......... 579 CCGGTCTGTG GACCCCCAGC TACAGCCTGT AGTGAAGACT GAATAGGTCG GGCTGGATAC 59020 .......... .......... .......... .......... .......... .......... 579 CCTCCTGAAC TCTGCCCTCT GGAGTAAGAA CTACTAAACT CACCTCCCTT ACGAAACTTC 58960 .......... .......... .......... .......... .......... .......... 579 TTAGTTGTTG ATGCCATGGT GAAATCATCT GGCTTCACTC CCTCCACCTC TATCACAAAG 58900 .......... .......... .......... .......... .......... .......... 579 TCTACCACTT CCTAAAAGGA TTTTGCTGCA GTAGATACCT GTAAGGCTGG AATCTGCAAA 58840 | ||||| |||||| | | | | ||||| |||| |||| |||| |||| .......... ..TGCAAGGA TTTTGCCGTA GCCGCTACCT GTAACGCTGA AATCCGCAAC 627 TCTGACCTCA ATCCCTTCAC AAAATGGCGA ATCCGCTCTT GTGGACTGAA GCAAAGCTGG 58780 |||||||||| | || ||||| |||| | ||| |||| ||||| |||||||||| ||||| || TCTGACCTCA ACCCTTTCAC AAAACGACGA ATCCTCTCTT GTGGACTGAA ACAAAGTTGA 687 GTGGCATACC TAGATAATGC ACGACACTTA GCCTCATACG CAGTAACCGA CATCCTGCCT 58720 |||||||| | | |||| ||| |||| ||||| |||||||| | || | ||| | |||||| ||| GTGGCATATC TGGATAGTGC ACGAAACTTA GCCTCATATG CATTGACCTA CATCCTACCT 747 TGCTCTAGGC TCAAGAACTC ATCTCTACTC CTATCCCTCT AAGTCCGGGG TATATACTTC 58660 |||| |||| |||||||||| ||| || || |||| |||| |||||||||| ||||||||| TGCTATAGGN TCAAGAACTC ATCCCTTTTC CTATNCCTCA AAGTCCGGGG GATATACTTC 807 TCCATAAACA AGCTAGAGAA TGATG-CCCA AGTCATAGGC GGTGCCTGTG CTGGTTGACA 58601 ||||||| |||||||| | ||| | |||| |||||| | ||||||| | ||| |||| CTCATAAAC- AGCTAGAG-A TGANGCCCCA GGTCATA-GT GGTGCCTCCG -TGG-TGACC 862 CTCGACATAC GATCGCCACC ACATTTTG 58573 | | ||| || ||||| | |||| CCCACCATGT GAGTGCCACT AACATTTG 890 hqPGS_C08HBa0294K15.1-_SGN-U335938+ (60159 59666,58887 58573) ******************************************************************************** EST sequence 74 +strand 775 n (File: SGN-U335930+) 1 NTTGAAACAA ATAGCTGGAG CTCCACCGCG GTGGCGGCCG CTCTAGAACT AGTGGATCCC 61 CCGGGCTGCA GGGAAACACG AATAGGCATA TCAAGTAATT CACAATGTAA AGTTAGACCA 121 TTAGCAAATG AGGAAGATAC ATAAGAAAAT GTGGATCCAG GATCAAACAA TACAGAAGCC 181 ATGCAATCAC AAACCAAAAG ATTACCTGTG ATGACAACAT CAGATTCCTC CGCTTCAGAC 241 CGCCCAGGGA AAGCGTAACA ATGGGCCCTA TCATTCTTAT GTCTGTTGCC CCTACCATGT 301 TGTGATGTAG TGGCTCCAGT TTGCCCATCA CCTCGGCCGT TTTGGTGACC ACCATTTCCT 361 CGACCGCCAC GTCCTCCAGA ATAACGGACT CTGCCATGAC CACCTCTACC TCTAACCTTT 421 GGAGGTCTGT AACTCTGTTT TGGACAATAT CTCTTAATAT GTCCAATCTC CCCACACCCA 481 TAGCACTCTC TGGGTTCATG CATAAGTCTC TCAGAGAAGT GTTGACCGGT CGAAGGTGGA 541 CCCCCAACTA CAGTCTGTAG TGAAGACTGA ATTGGTCGGA CTGAGTAACT TCCCGAACCC 601 TGTCCTCTAG TGTAAGCACC ATTAAACTCA CCTCCCTTTC GAAACCTTTA TGATGTCGAT 661 GTCGGGGTGA AGTCGTCTGG CTTCACTCCT TCCACTTCTA TAACAAAGTC TACCACCTCT 721 TGGAAGGATT TTGCCGTTGC CGGTTTCTGG TAAGGCCGAA ATCCGAATTT TTGCC Predicted gene structure (within gDNA segment 61330 to 55484): Exon 1 59568 59130 ( 439 n); cDNA 74 511 ( 438 n); score: 0.884 Intron 1 59129 59094 ( 36 n); Pd: 0.000 (s: 0.88), Pa: 0.000 (s: 0.76) Exon 2 59093 58836 ( 258 n); cDNA 512 773 ( 262 n); score: 0.760 MATCH C08HBa0294K15.1- SGN-U335930+ 0.838 697 0.899 C PGS_C08HBa0294K15.1-_SGN-U335930+ (59568 59130,59093 58836) Alignment (genomic DNA sequence = upper lines): AAACACGAAT AGGCATGTCA AGCAATTCAC AATGTAAATT AAGACCAGTA GCAAATGAGG 59509 |||||||||| |||||| ||| || ||||||| |||||||| | |||||| || |||||||||| AAACACGAAT AGGCATATCA AGTAATTCAC AATGTAAAGT TAGACCATTA GCAAATGAGG 133 AAGATACATA TGAAAATGTG GATCCAGGAT CAAATAATAC AGAAGCCATG CAATCACAAA 59449 |||||||||| ||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| AAGATACATA AGAAAATGTG GATCCAGGAT CAAACAATAC AGAAGCCATG CAATCACAAA 193 CCAAAAGATT ACCTGTGATA ACAACATCAG ATGTCTCCGC TTCAGACCTC CCAGGGAAAG 59389 |||||||||| ||||||||| |||||||||| || |||||| |||||||| | |||||||||| CCAAAAGATT ACCTGTGATG ACAACATCAG ATTCCTCCGC TTCAGACCGC CCAGGGAAAG 253 CATAACAATG GGCCCTATCA CCTGTCTATC CGTTGCCCCT ACCATGTTGT GCTGCAGTCG 59329 | |||||||| |||||||||| | | || ||||||||| |||||||||| | || ||| | CGTAACAATG GGCCCTATCA TTCTTATGTC TGTTGCCCCT ACCATGTTGT GATGTAGTGG 313 CTCCGGCTTG TCCGCCACCC CGGTTGATTT GTGTGACCAC CATTACCTCG GCCACCATGT 59269 |||| | ||| || |||| ||| | ||| | |||||||| |||| ||||| || ||| || CTCCAGTTTG CCCATCACCT CGGCCGTTTT G-GTGACCAC CATTTCCTCG ACCGCCACGT 372 TCTCCAGAAT AGCGGCCTCT TCCATGACCA CCTCTACCCC TGACTATTGA AGGTCTGTAA 59209 ||||||||| | ||| |||| ||||||||| |||||||| | | || ||| |||||||||| CCTCCAGAAT AACGGACTCT GCCATGACCA CCTCTACCTC TAACCTTTGG AGGTCTGTAA 432 CTCTGTTTTG GACAATATCT CTTAATATGT CCAATTTCCC CACATCCATA ACACTCTCTG 59149 |||||||||| |||||||||| |||||||||| ||||| |||| |||| ||||| ||||||||| CTCTGTTTTG GACAATATCT CTTAATATGT CCAATCTCCC CACACCCATA GCACTCTCTG 492 GGTTCGAGCA TAGGTCTCTG TGAGAACGAC GGAGTCTGGG GATAACCTCC AAACTCAGAG 59089 ||||| ||| || |||||| ||||| GGTTCATGCA TAAGTCTCT. .......... .......... .......... .....CAGAG 516 AAATGTTGAC CGGTC---TG TGGACCCCCA GCTACAGCCT GTAGTGAAGA CTGAATAGGT 59032 || ||||||| ||||| | |||||||||| |||||| || |||||||||| |||||| ||| AAGTGTTGAC CGGTCGAAGG TGGACCCCCA ACTACAGTCT GTAGTGAAGA CTGAATTGGT 576 CGGGCTGGAT ACCCTCCTGA ACTCTGCCCT CTGGAGTAAG AACTACTAAA CTCACCTCCC 58972 ||| ||| | | | ||| || || ||| ||| || | ||||| || | |||| |||||||||| CGGACTGAGT AACTTCCCGA ACCCTGTCCT CTAGTGTAAG CACCATTAAA CTCACCTCCC 636 TTACGAAACT TCTTAGTTGT TGATGCCATG GTGAAATCAT CTGGCTTCAC TCCCTCCACC 58912 || |||||| | | | ||| |||| | | ||||| || | |||||||||| ||| ||||| TTTCGAAACC TTTATGATGT CGATGTCGGG GTGAAGTCGT CTGGCTTCAC TCCTTCCACT 696 TCTATCACAA AGTCTACCAC TTCCTAAAAG GATTTTGCTG CAGTAGATAC CT-GTAAGGC 58853 ||||| |||| |||||||||| || | ||| |||||||| | | | | || ||||||| TCTATAACAA AGTCTACCAC CTCTTGGAAG GATTTTGCCG TTGCCGGTTT CTGGTAAGGC 756 TGGAATCTGC AAATCTG 58836 | |||| | | | || CGAAATCCGA ATTTTTG 773 hqPGS_C08HBa0294K15.1-_SGN-U335930+ (59568 59130,59093 58836) ******************************************************************************** EST sequence 77 +strand 797 n (File: SGN-U335933+) 1 AATTGCTGGA GCTCCACGCG GTGGCGGCCG CTCTAGACTA GTGGATCCCC CGGGCTGCAG 61 GCGGTGGATA CCTAGGCACC CAGAGACGAG GAAGGGCGTA GTAATCGACG AAATGCTTCG 121 GGGAGTTGAA AATAAGCATA GATCCGGAGA TTCCCGAATA GGGCAACCTT TCGAACTGCT 181 GCTGAATCCA TGGGCAGGCA AGAGACAACC TGGCGAACTG AAACATCTTA GTAGCCAGAG 241 GAAAAGAAAG CAAATAAGGA AGATACATAA GAAAACGTGG ATCCAGGATC AAACAATACA 301 GAAGCCATGC AATCACAAAC CAGAAGATTA CCTGTGATGA CAACATCAGA TGCCTCCGCT 361 TCACACCGCC CAGGGAAAGC GTAACAATGG GCCCTATCGT TCGTCTGTCC GTTGCCCCTA 421 CCATGTTGTG ATGTAGTGGC CCAAGTTTGC CCATTACCTC TGCCGTTTTG GTGACCACCA 481 TTACCTCGAC CACCACGTCC TCCAGAATAA CGGCCTCTAC CATGACCACC TCTACCTCTA 541 GCTATTGGGG GTCTATAACT TTGTCTGGGA CAATTTTTCC TAATATGTCC AATCTCCCCA 601 CATCCATACC ATTCTCTGGA GTCAATCCTA GGCCCCTCGG AGAAGTGTTG ACCGGTCTGA 661 GGTGGTCCCC CAACTACAGT CTGTAGTGAA GACTCAATTG GTCGGACTGA GTAACTTCCC 721 GAACCCTGTC CTCTAGTGTA AGAACCATTA AACTCACCTC CCTTTCGAAG CCTTTTTGAT 781 GTCGATGTTG GGGTGAA Predicted gene structure (within gDNA segment 63451 to 55058): Exon 1 62393 62379 ( 15 n); cDNA 165 179 ( 15 n); score: 0.933 Intron 1 62378 60891 (1488 n); Pd: 0.900 (s: 0), Pa: 0.941 (s: 0) Exon 2 60890 60867 ( 24 n); cDNA 180 201 ( 22 n); score: 0.583 Intron 2 60866 60142 ( 725 n); Pd: 0.000 (s: 0), Pa: 0.416 (s: 0) Exon 3 60141 60125 ( 17 n); cDNA 202 216 ( 15 n); score: 0.588 Intron 3 60124 59587 ( 538 n); Pd: 0.504 (s: 0), Pa: 0.158 (s: 0) Exon 4 59586 59557 ( 30 n); cDNA 217 246 ( 30 n); score: 0.633 Intron 4 59556 59522 ( 35 n); Pd: 0.922 (s: 0), Pa: 0.000 (s: 0.88) Exon 5 59521 59130 ( 392 n); cDNA 247 637 ( 391 n); score: 0.844 Intron 5 59129 59094 ( 36 n); Pd: 0.000 (s: 0.80), Pa: 0.000 (s: 0.73) Exon 6 59093 58937 ( 157 n); cDNA 638 797 ( 160 n); score: 0.761 MATCH C08HBa0294K15.1- SGN-U335933+ 0.821 635 0.797 C PGS_C08HBa0294K15.1-_SGN-U335933+ (62393 62379,60890 60867,60141 60125,59586 59557,59521 59130,59093 58937) Alignment (genomic DNA sequence = upper lines): AACCTTTCGA TCTGCATATT CTTCCTGTCT ACTTTGAGCC GCTAAAAGCT TTTCTTGTAT 62334 |||||||||| |||| AACCTTTCGA ACTGC..... .......... .......... .......... .......... 179 GCATTTCACT TTATTTAATG ATTCCCTCAG AAGGTAAGTA CCCCAAGGTC TAACCTCAAA 62274 .......... .......... .......... .......... .......... .......... 179 TGCATCAAAC CACCCAATGG GAGACCTACA TCTTCTCCCA TACAGTGCCT CAAATGGGGC 62214 .......... .......... .......... .......... .......... .......... 179 CATATCAATA CTTGAGTGAT AGCTAATGTT GTATGAGAAC TCTGCTAAGA GTAAGAAGTT 62154 .......... .......... .......... .......... .......... .......... 179 ATCCCAATGA CCACCAAACT CTATCACACA TGCACGAAGC ATATCCTCCA AAACCTGAAT 62094 .......... .......... .......... .......... .......... .......... 179 CGTTCGCTCA GACTGACCAT CAGTCTGAGG GTGAAATGCA GTACTAAGAT CCAACGTAGT 62034 .......... .......... .......... .......... .......... .......... 179 ACCTAATTCA GCATGCAATG TTTTCCAAAA CATAGAAGTA AACTGCGTAC CCCTATTTGA 61974 .......... .......... .......... .......... .......... .......... 179 TATAATGGAA AGTGGAACTC CATGCAATCG AACAATTTCT GAGATGTAAA GTTTGGCCAA 61914 .......... .......... .......... .......... .......... .......... 179 CTTCTCTGCA TTATAAGTCA CCTTGACCGG AATGAAATGA GCAGACTTAG TTAATTTGTC 61854 .......... .......... .......... .......... .......... .......... 179 AACAATTACC CAAATGGAGT CATACTTACC CATTGTCTTT GGAAGACCAA CCACGAAGTC 61794 .......... .......... .......... .......... .......... .......... 179 CATTGCAATT CTCTCCCACT TCCATTCAGG AATGGACATT CTCTGAAGTG TCCCTCCAGG 61734 .......... .......... .......... .......... .......... .......... 179 CCTCTGGTGT TCATACTTTA CTTGCTGACA ATTCGGGCAT TGAGCAACAA AATCAACAAT 61674 .......... .......... .......... .......... .......... .......... 179 GTCACGCTTC ATCCTACTCC ACAAAAAATG TTGCTTTAGA TCACGATACA TCTTGGTTGC 61614 .......... .......... .......... .......... .......... .......... 179 ACCAGGATGT ATAGAATACC TTGAACTATG AGCCTTTGTA AGAATAGTGT GAATCAAATC 61554 .......... .......... .......... .......... .......... .......... 179 ATCGACACGG GGTACACATA CCCTTCCCTT AATTCTCAAA ACACCTTCCT CATCGATTTT 61494 .......... .......... .......... .......... .......... .......... 179 TGCTTCTTTA GCCTCTCCTC GCAACACCTT ATCTCGGATC CGGATCAGTT TCTCATCGGT 61434 .......... .......... .......... .......... .......... .......... 179 AAACTGTTTT CCTTTAATCT TATCAAGAAA GGAAGATCTT GCCTCCACAC AGGCCAAAAA 61374 .......... .......... .......... .......... .......... .......... 179 TCCTCCCTTC CCATTTACTT CTAGCCTCAT AAAGTCATTA GCCAGAGTCT GAACCTCTCT 61314 .......... .......... .......... .......... .......... .......... 179 AGCCAATGGG CGTCTAGAAA CCTGCAAGTG GGCTAGACTT CCCATGCTCC CTGCCTTTCT 61254 .......... .......... .......... .......... .......... .......... 179 ACTTAAAGCA TCTGCCACAA CATTAGCTTT TCCCGGATGA TACAAAATAG TGATATCATA 61194 .......... .......... .......... .......... .......... .......... 179 GTCCTTCAGT AGTTCCATCC ACCTTCTCTG TCTCAAATTC AAATCTTTCT AAGTAAAGAC 61134 .......... .......... .......... .......... .......... .......... 179 ATACAGTAAA CTACGATGAT CCGTATAGAC TTCACACTTA ACCCCATATA GATAATGTCT 61074 .......... .......... .......... .......... .......... .......... 179 CTATTGCTTT AATGCAAACA CTACCGCAGC CAACTCCCAA TCATGGGTCG GATAATTACG 61014 .......... .......... .......... .......... .......... .......... 179 TTCATGCACC TTTAATTGTC TCGAAGCATA AGCAATTACA TTCTTCTCTT GCATTAGCAC 60954 .......... .......... .......... .......... .......... .......... 179 TGCACCCAAA CCCGAATAGG ATTCATCATA ATAAATAATG AAATTCTTAC CTTCCACTGG 60894 .......... .......... .......... .......... .......... .......... 179 CAGGGTAAGA ATTGGTGCGG TAGTCAACAA GGTCTTGAGT TTCTGAAAGC TTTCTTCACA 60834 | || || || || || ||| ...TG-CTGA ATCCATG-GG CAGGCAA... .......... .......... .......... 201 CTCGTCTGAC CATACAAATG GGACACTCTG CTTAGTTAAG TTTGTCAATT GGGAAGCAAC 60774 .......... .......... .......... .......... .......... .......... 201 AGAAGAAAAT CCCTCGATAA ATCGATGGTA GTAGCTAGCT AAACCAACAA AGCTACTTAC 60714 .......... .......... .......... .......... .......... .......... 201 CTCTGTAACA TTAGTAGGTC TTTCCCAACT CTTCACTGCT TCGATCTTAG AAGGATCCAC 60654 .......... .......... .......... .......... .......... .......... 201 AATCACTCCA TCCTTAGAAA CCACATGCCC CAAGAAGGAC ACTGAATCTA GCCAAAACTC 60594 .......... .......... .......... .......... .......... .......... 201 ACACTTGGAG AATTTGGCAT TAAGCTTTTT CTCCCTCAAC ATTTCCAATA CCATTCTCAA 60534 .......... .......... .......... .......... .......... .......... 201 GTGCTCCTCA TGTTCTTTCT TGCTCTTTGA GTATACCAGT ATATCATCAA CGAATACAAT 60474 .......... .......... .......... .......... .......... .......... 201 GACAAAGAGA TCTAGATATG GATTAAAGAT TCCGTTCATC AAGCTCATGA ACGCAGCAGG 60414 .......... .......... .......... .......... .......... .......... 201 GGCATTCGTA AGCCCAAAAG ACATTACTAA GAACTCGTAA TACCCATATC TTGTTCGAAA 60354 .......... .......... .......... .......... .......... .......... 201 AGCAGTCTTG GGCACATTCG TTGCCCATAT TTTCAATTGA TGATAACCAG ATCTCAAATC 60294 .......... .......... .......... .......... .......... .......... 201 AATTTTTGAG AAGGTACAAG CACCTTGTAA CTGATCGAAC AAATCATCGA TGTGAGGAAG 60234 .......... .......... .......... .......... .......... .......... 201 AGGATACTTG TTCTTAACAG TTACCTTATT CAGTTGTCTG TAGTCAATGC ACATCCGAAA 60174 .......... .......... .......... .......... .......... .......... 201 ACTTCCATCC TTCTTCTTCA CAAACAAAAC AGGAGTACCC CAAGGGGATG CACTTGGTCT 60114 ||| || | || || .......... .......... .......... ..GAG-ACAA CCTGGCGA-. .......... 216 AATAAAACCT TTCCCTAACA ACTCTTGAAG TTGGGCCTTT AACTCTCTTA ACTCAGCGGG 60054 .......... .......... .......... .......... .......... .......... 216 AGCCATTCTA TAAGGGGGTA TGGAAATGGG GCGAGTACCC GGCTCCAGAT CAATACAGAA 59994 .......... .......... .......... .......... .......... .......... 216 ATCAATATCT CTATCTGGTG GCATACCAGA AAGGTCTGCA GGAAACACAT CCAAAAACTC 59934 .......... .......... .......... .......... .......... .......... 216 ACGGACTATC GAAACCGACT CAATTGAAGG TACTTGGGTA GTATCATCCC TGAGGTGTGC 59874 .......... .......... .......... .......... .......... .......... 216 CAAGAAAGCT AAACACCCTT TACTAACCAT TCTCTTAGCA CGAAGAAATG AGATGATACG 59814 .......... .......... .......... .......... .......... .......... 216 AACTGGAGTG GGAGTGTAGT CACCCTCCCA CACTAACGGA TCTGTCTCAG GCTTGGCCAA 59754 .......... .......... .......... .......... .......... .......... 216 TGTCACAGTT TTGGCATTAC AGTCTAAGAT TGCAAAGTTT GGAGAAAGCC AAGTCATACC 59694 .......... .......... .......... .......... .......... .......... 216 CAGAATTACA TCGAAATCAA CCATTTCTAA GATAACCAAG TCTACATGAG TATTACTCCC 59634 .......... .......... .......... .......... .......... .......... 216 CATAAAAGTC ACAAGACAAG ACCTATACAC CTTTTCAACT ATCACAGACT CACCCACCGG 59574 ||| | || | .......... .......... .......... .......... .......ACT GAAACATCTT 229 AGTAGAAACA CGAATAGGCA TGTCAAGCAA TTCACAATGT AAATTAAGAC CAGTAGCAAA 59514 ||||| | | ||| || |||||| AGTAGCCAGA GGAAAAG... .......... .......... .......... ..AAAGCAAA 254 TGAGGAAGAT ACATATGAAA ATGTGGATCC AGGATCAAAT AATACAGAAG CCATGCAATC 59454 | |||||||| ||||| |||| | |||||||| ||||||||| |||||||||| |||||||||| TAAGGAAGAT ACATAAGAAA ACGTGGATCC AGGATCAAAC AATACAGAAG CCATGCAATC 314 ACAAACCAAA AGATTACCTG TGATAACAAC ATCAGATGTC TCCGCTTCAG ACCTCCCAGG 59394 |||||||| | |||||||||| |||| ||||| |||||||| | ||||||||| ||| |||||| ACAAACCAGA AGATTACCTG TGATGACAAC ATCAGATGCC TCCGCTTCAC ACCGCCCAGG 374 GAAAGCATAA CAATGGGCCC TATCACCTGT CTATCCGTTG CCCCTACCAT GTTGTGCTGC 59334 |||||| ||| |||||||||| |||| || || ||||||| |||||||||| |||||| || GAAAGCGTAA CAATGGGCCC TATCGTTCGT CTGTCCGTTG CCCCTACCAT GTTGTGATGT 434 AGTCGCTCCG GCTTGTCCGC CACCCCGGTT GATTTGTGTG ACCACCATTA CCTCGGCCAC 59274 ||| || | | ||| || ||| | | | |||| ||| |||||||||| ||||| |||| AGTGGCCCAA GTTTGCCCAT TACCTCTGCC GTTTTG-GTG ACCACCATTA CCTCGACCAC 493 CATGTTCTCC AGAATAGCGG CCTCTTCCAT GACCACCTCT ACCCCTGACT ATTGAAGGTC 59214 || || |||| |||||| ||| ||||| |||| |||||||||| ||| || || |||| |||| CACGTCCTCC AGAATAACGG CCTCTACCAT GACCACCTCT ACCTCTAGCT ATTGGGGGTC 553 TGTAACTCTG TTTTGGACAA TATCTCTTAA TATGTCCAAT TTCCCCACAT CCATAACACT 59154 | ||||| || | | |||||| | | || ||| |||||||||| ||||||||| ||||| || | TATAACTTTG TCTGGGACAA TTTTTCCTAA TATGTCCAAT CTCCCCACAT CCATACCATT 613 CTCTGGGTTC GAGCATAGGT CTCTGTGAGA ACGACGGAGT CTGGGGATAA CCTCCAAACT 59094 |||||| || | | |||| | || CTCTGGAGTC AATCCTAGGC CCCT...... .......... .......... .......... 637 CAGAGAAATG TTGACCGGTC T---GTGGAC CCCCAGCTAC AGCCTGTAGT GAAGACTGAA 59037 | ||||| || |||||||||| | |||| | ||||| |||| || ||||||| ||||||| || CGGAGAAGTG TTGACCGGTC TGAGGTGGTC CCCCAACTAC AGTCTGTAGT GAAGACTCAA 697 TAGGTCGGGC TGGATACCCT CCTGAACTCT GCCCTCTGGA GTAAGAACTA CTAAACTCAC 58977 | |||||| | || || | | || |||| || | ||||| | |||||||| | ||||||||| TTGGTCGGAC TGAGTAACTT CCCGAACCCT GTCCTCTAGT GTAAGAACCA TTAAACTCAC 757 CTCCCTTACG AAACTTCTTA GTTGTTGATG CCATGGTGAA 58937 ||||||| || || | | || | ||| |||| |||||| CTCCCTTTCG AAGCCTTTTT GATGTCGATG TTGGGGTGAA 797 hqPGS_C08HBa0294K15.1-_SGN-U335933+ (59586 59557,59521 59130,59093 58937) ******************************************************************************** EST sequence 43 -strand 912 n (File: SGN-U335931-) 1 GTAGCCGCTA CTGTAAGGTT TAAATTCGCA ATTTGGATCT AAAACCTTTC ACAAACGGGG 61 GAATCCGGTT TTGTGGACTG AAACAAAGTT GGGTGGAATC CCGGGATAAG GCACGAAACT 121 AGCCTTCAAA TGCAGTAACC AACATCCTAC TTTGTTCTAG GCTCAAAAAC TCATCTCTTT 181 TCCTATCCCT CAAAGTCCGG GGGATATACT TCTCCATAAA CAAGCTAGAG AATGATGCCC 241 AAGTCATACG TGGTGCCTCT GTTGGTTGAC ACTCAACATG TGACCGCCAC CACATTTTGG 301 CGTTCCCTTG AAACTGATAA GTCACAAACT CAACACCAAA CCGTTCTACT ATACCCATCT 361 TGTGTAGTAG CTCATGACAG TCAACCAGAA AATCGTAGGC ATCCTCAGAT TCAACACCCT 421 TGTAGACTTG AGGTTTCAAT TTCAAGAACT TACTAAAAAG TTCATGCTGA TCATTTGTCA 481 TTATAGGCCC TGTAGTCAGA CGGGGAAACG TTCCTATTTC CAATGAGGTA TCGATGCGGG 541 GAGTCACAGT AGGCGCATGT TGTACCTCCG GAGCCTGAGG TGCTAGTGCA GAAAACACTG 601 GAGGTGCTTG GCCTTGATCA GATAACCCGC TAAGGTAAGC AAGAACCTGA TTGATCATCT 661 CTTGGGTAGG TTGGGGTGGC AATTCCTCAT TCTGCACTTG TTCATTCTCC CCATCCTCAC 721 CCTCTCTTAC CACTTCCTCA GTTGGTGGAG GTGTCACCGC CTTAGTACCA GATGGGCTAG 781 GTGCCTCGTG CAGAATTCCT GCAGCCCGGG GGATCCACTA GTTCTAGAGC GGCCGCCACC 841 GCGGTGATTC CAAGTGTTGT CGATNNNTAC GATCAGNATA CATACNTTAC AAANNCCCNN 901 TGGCTCTAAC CA Predicted gene structure (within gDNA segment 61308 to 55722): Exon 1 58870 58088 ( 783 n); cDNA 3 784 ( 782 n); score: 0.860 MATCH C08HBa0294K15.1- SGN-U335931- 0.860 783 0.859 C PGS_C08HBa0294K15.1-_SGN-U335931- (58870 58088) Alignment (genomic DNA sequence = upper lines): AGTAGATACC TGTAAGGCTG GAATCTGCAA ATCTGACCTC AATCCCTTCA CAAAATGGCG 58811 || | ||| ||||||| | ||| |||| | || || || || |||| |||| || | AGCCGCTAC- TGTAAGGTTT AAATTCGCAA TTTGGATCTA AAACCTTTCA CAAACGGGGG 61 AATCCGCTCT TGTGGACTGA AGCAAAGCTG GGTGGCATAC CTAGATAATG CACGACACTT 58751 |||||| | | |||||||||| | ||||| || ||||| || | | ||||| | ||||| || | AATCCGGTTT TGTGGACTGA AACAAAGTTG GGTGGAATCC CGGGATAAGG CACGAAAC-T 120 AGCC-TCATA CGCAGTAACC GACATCCTGC CTTGCTCTAG GCTCAAGAAC TCATCTCTAC 58692 |||| ||| | ||||||||| ||||||| | ||| ||||| |||||| ||| |||||||| AGCCTTCAAA TGCAGTAACC AACATCCTAC TTTGTTCTAG GCTCAAAAAC TCATCTCTTT 180 TCCTATCCCT CTAAGTCCGG GGTATATACT TCTCCATAAA CAAGCTAGAG AATGATGCCC 58632 |||||||||| | |||||||| || ||||||| |||||||||| |||||||||| |||||||||| TCCTATCCCT CAAAGTCCGG GGGATATACT TCTCCATAAA CAAGCTAGAG AATGATGCCC 240 AAGTCATAGG CGGTGCCTGT GCTGGTTGAC ACTCGACATA CGATCGCCAC CACATTTTGG 58572 |||||||| | ||||||| | | |||||||| |||| |||| || |||||| |||||||||| AAGTCATACG TGGTGCCTCT GTTGGTTGAC ACTCAACATG TGACCGCCAC CACATTTTGG 300 AATTTCCCTG AAACTTATAG GTTACAAACT CAACACCGAA TCGTTCCACT ATGCCCATCT 58512 || || || ||||| ||| || ||||||| ||||||| || ||||| ||| || ||||||| CGTTCCCTTG AAACTGATAA GTCACAAACT CAACACCAAA CCGTTCTACT ATACCCATCT 360 TATGTAGAAA CTCATGACAA TCAACCACAA AATCATAGGC ATCCTCAGAT TCAGCACCCT 58452 | ||||| | ||||||||| ||||||| || |||| ||||| |||||||||| ||| |||||| TGTGTAGTAG CTCATGACAG TCAACCAGAA AATCGTAGGC ATCCTCAGAT TCAACACCCT 420 TGAAGACTGG AGGTTTCAAT TTCAAGAACT TATTGAAAAG TTCGTGCTGA TCACTTGTCA 58392 || ||||| | |||||||||| |||||||||| || | ||||| ||| |||||| ||| |||||| TGTAGACTTG AGGTTTCAAT TTCAAGAACT TACTAAAAAG TTCATGCTGA TCATTTGTCA 480 TTATAGGTCC TGTAGTCAAT CGAGGAAACG TGCCTATTTC CAATGAGGCA TCCATGCGGG 58332 ||||||| || |||||||| || ||||||| | |||||||| |||||||| | || ||||||| TTATAGGCCC TGTAGTCAGA CGGGGAAACG TTCCTATTTC CAATGAGGTA TCGATGCGGG 540 GAGCCATAGC AGCTGCATGT TGTACTCCCG AAACCTGAGG CGTTGGTGCA GAAAACACTG 58272 ||| || || || |||||| ||||| ||| | ||||||| | | ||||| |||||||||| GAGTCACAGT AGGCGCATGT TGTACCTCCG GAGCCTGAGG TGCTAGTGCA GAAAACACTG 600 GAGGTGTCTG GCCTTGATCA GATAACCCGC TAAGATAAGC AAGAACCTGG TTAATCATCT 58212 |||||| || |||||||||| |||||||||| |||| ||||| ||||||||| || ||||||| GAGGTGCTTG GCCTTGATCA GATAACCCGC TAAGGTAAGC AAGAACCTGA TTGATCATCT 660 CTGGGGTAGG TTGGGGTGGT AATTCCTCAT TCTGCACTTG TTCATCCTCC CCTTCCTCAC 58152 || ||||||| ||||||||| |||||||||| |||||||||| ||||| |||| || ||||||| CTTGGGTAGG TTGGGGTGGC AATTCCTCAT TCTGCACTTG TTCATTCTCC CCATCCTCAC 720 CCTCTCTTAC TACTTCCTCA GTCGGTGGAG GAGTCACCGC CCTAGTACTA GATGGGCCAG 58092 |||||||||| ||||||||| || ||||||| | |||||||| | |||||| | ||||||| || CCTCTCTTAC CACTTCCTCA GTTGGTGGAG GTGTCACCGC CTTAGTACCA GATGGGCTAG 780 GTGC 58088 |||| GTGC 784 hqPGS_C08HBa0294K15.1-_SGN-U335931- (58870 58088) ******************************************************************************** EST sequence 50 -strand 1307 n (File: SGN-U346572-) 1 AANNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 61 NNNNNNNTTT TTTTTTNTNN NTTTCAACGA AGGGAGCCCC TCTTTTTTTT TTTTTTACCT 121 TTTCCCCCCG GAAGAGGATT CCGGGGGGTG GCAATTTTTT CCTTCCTATA GGGGTTTTTC 181 CGGGTGGGCC AATTCAGTTT TTCCTACCCT TTAGTTTCGA AATTTGGAAA ACCATTTTTT 241 CCCAGAATTC TTTGATCTTA CCATTTTTAG ATTTATCAGT TTCCAGAGGT TTTTCCCCCC 301 AAAATTCCAA GGCAAGGCCT TTTCCCTTTT TCATTTTACC AGCTTTCCCC CCAGGAGTAG 361 GGAATGTTGG ATGGTCTGGG ATGGCCCCCT ACCTTCACCC GGTAGTAAAG ACAAATAGGT 421 CGAGCTGGTT ACCTCCTGAA CTTCTTCCCT TTGGAGTATG AATCACTAAA CTCACCTCCC 481 GTGCGGACTT TCTTAGAGGT CGACGCCATG TGAAAGTATT CTGATTTCAC CCCCTCCACC 541 TCTATCATAA AGTCAACCAC TTCCTGAAAG AATTTGCTGC ANGCAGCTAC CTGTAGGGCT 601 GGGATCTGCA AATCTGACCT CAATCCTTTC ACAAAACGGT GAATCCGCTC TTGTGGACTG 661 AAGCAAAGCT GGGTGGCATA CCTGGATAGT GCACAAAATT TAGCCTCATA AGCAGTAACA 721 GACATCCTGC CTTGCTATAG ACTCAGGAAC TCATCTCTCC TCCTATCCCT CAACGTCCGG 781 GGTATACACT TTTCCATAAA TAAGCTAGAG AATGATGCCC AAGTCATAGG TGGTGCTGTG 841 CTGGTTGACA CTCAACATAC GACCGCCACC ACATTTTGAC ATTTCCCTGA AATTGATAGG 901 TCACAAACTC AACCCCGAAC CGTTCTACTA TGTCCATCTT ATGTAGCAGC TCATGACAAT 961 CAACAAGAAA ATCATAGGCA TCCTCAGATT CAGCACCCTT GAAGACTAGA GGTTTCAACT 1021 TCAAGAATTT AGTGAAAAGT TCATGTTGAT CACTCGTCAT TATAGGCCCT GTAGTCAATC 1081 GAGGAAATGT GCCTATTTCC AATGAGGCAT CCATGCGGAG AGCCACAACA GCTGCATGTT 1141 GTACTCCCGG AACCTGAGGT GCTGGTACAG GAAACACTGG AGGTGTCTGG CCCTGATCAG 1201 ATAACCCGCT AAGATGAGAA AGAACCTGGT TGATCATCTC CTCGTGCCGA TTCCTGCAGC 1261 CCGGGGGATC CACTAGTTCT GAGCGCCCCC CGCGGATCCG TTTTATN Predicted gene structure (within gDNA segment 65488 to 56716): Exon 1 60141 60118 ( 24 n); cDNA 134 157 ( 24 n); score: 0.625 Intron 1 60117 59791 ( 327 n); Pd: 0.533 (s: 0), Pa: 0.000 (s: 0.62) Exon 2 59790 59569 ( 222 n); cDNA 158 360 ( 203 n); score: 0.644 Intron 2 59568 59090 ( 479 n); Pd: 0.000 (s: 0.66), Pa: 0.000 (s: 0.61) Exon 3 59089 58211 ( 879 n); cDNA 361 1240 ( 880 n); score: 0.867 MATCH C08HBa0294K15.1- SGN-U346572- 0.822 1125 0.861 C PGS_C08HBa0294K15.1-_SGN-U346572- (60141 60118,59790 59569,59089 58211) Alignment (genomic DNA sequence = upper lines): GAGTACCCCA AGGGGATGCA CTTGGTCTAA TAAAACCTTT CCCTAACAAC TCTTGAAGTT 60082 ||| | || |||| ||| || GAGGATTCCG GGGGGTGGCA ATTT...... .......... .......... .......... 157 GGGCCTTTAA CTCTCTTAAC TCAGCGGGAG CCATTCTATA AGGGGGTATG GAAATGGGGC 60022 .......... .......... .......... .......... .......... .......... 157 GAGTACCCGG CTCCAGATCA ATACAGAAAT CAATATCTCT ATCTGGTGGC ATACCAGAAA 59962 .......... .......... .......... .......... .......... .......... 157 GGTCTGCAGG AAACACATCC AAAAACTCAC GGACTATCGA AACCGACTCA ATTGAAGGTA 59902 .......... .......... .......... .......... .......... .......... 157 CTTGGGTAGT ATCATCCCTG AGGTGTGCCA AGAAAGCTAA ACACCCTTTA CTAACCATTC 59842 .......... .......... .......... .......... .......... .......... 157 TCTTAGCACG AAGAAATGAG ATGATACGAA CTGGAGTGGG AGTGTAGTCA CCCTCCCACA 59782 ||| | .......... .......... .......... .......... .......... .TTTCCTTC- 165 CTAACGGATC TGTCTCAGGC TTGGCCAATG TCACAGTTTT GGCATTACAG TCTAAGATTG 59722 ||| || | | || || | ||||||| | ||||||| | ||| | | || || CTATAGG-GG TTTTTCCGGG TGGGCCAAT- T--CAGTTTT -TC-CTACCC T-TTAG-TTT 217 CAAAGTTTGG AGAAAGCCAA GTCATACCCA GAATTACATC GAAATCAACC ATTTCTAAGA 59662 | || ||||| | ||| || | | | |||| ||||| | | || | ||| |||| | ||| CGAAATTTGG A-AAA-CC-A TTTTTTCCCA GAATT-CTTT GATCT-TACC ATTTTT-AGA 271 TAACCAAGTC TACATGAGTA TTACTCCCCA TAAAAGTCAC AAGACAAGAC CTATACACCT 59602 | ||| | || ||| || ||||| |||| || | ||| |||| | || | | ||| TTTATCAGTT TCCA-GAGGT TT-TTCCCCC CAAAATTC-C AAGGCAAGGC CTTTTC-CCT 327 TTTCAACTAT CACAGACTCA CCCACCGGAG TAGAAACACG AATAGGCATG TCAAGCAATT 59542 ||| | | | ||| | ||| | |||| ||| TTTTCATTTT ACCAGCTTTC CCCCCAGGAG TAG....... .......... .......... 360 CACAATGTAA ATTAAGACCA GTAGCAAATG AGGAAGATAC ATATGAAAAT GTGGATCCAG 59482 .......... .......... .......... .......... .......... .......... 360 GATCAAATAA TACAGAAGCC ATGCAATCAC AAACCAAAAG ATTACCTGTG ATAACAACAT 59422 .......... .......... .......... .......... .......... .......... 360 CAGATGTCTC CGCTTCAGAC CTCCCAGGGA AAGCATAACA ATGGGCCCTA TCACCTGTCT 59362 .......... .......... .......... .......... .......... .......... 360 ATCCGTTGCC CCTACCATGT TGTGCTGCAG TCGCTCCGGC TTGTCCGCCA CCCCGGTTGA 59302 .......... .......... .......... .......... .......... .......... 360 TTTGTGTGAC CACCATTACC TCGGCCACCA TGTTCTCCAG AATAGCGGCC TCTTCCATGA 59242 .......... .......... .......... .......... .......... .......... 360 CCACCTCTAC CCCTGACTAT TGAAGGTCTG TAACTCTGTT TTGGACAATA TCTCTTAATA 59182 .......... .......... .......... .......... .......... .......... 360 TGTCCAATTT CCCCACATCC ATAACACTCT CTGGGTTCGA GCATAGGTCT CTGTGAGAAC 59122 .......... .......... .......... .......... .......... .......... 360 GACGGAGTCT GGGGATAACC TCCAAACTCA GAGAAATGTT GACCGGTCT- -G-TGGACCC 59065 | |||||| | ||||| | ||| ||| .......... .......... .......... ..GGAATGTT GGATGGTCTG GGATGGCCCC 388 CCAGCTACAG CCTGTAGTGA AGACTGAATA GGTCGGGCTG GATACCCTCC TGAAC-TCTG 59006 | | || || || ||||| | |||| |||| ||||| |||| | || ||||| ||||| ||| CTACCTTCAC CCGGTAGTAA AGAC-AAATA GGTCGAGCTG GTTA-CCTCC TGAACTTCTT 446 CCCTCTGGAG TAAGAACTAC TAAACTCACC TCCCTTACGA AACTTCTTAG TTGTTGATGC 58946 |||| ||||| || ||| || |||||||||| |||| | || | ||||||| || || || CCCTTTGGAG TATGAATCAC TAAACTCACC TCCCGTGCGG ACTTTCTTAG AGGTCGACGC 506 CATGGTGAAA -TCATCTGGC TTCACTCCCT CCACCTCTAT CACAAAGTCT ACCACTTCCT 58887 ||| |||||| | |||| ||||| |||| |||||||||| || |||||| |||||||||| CAT-GTGAAA GTATTCTGAT TTCACCCCCT CCACCTCTAT CATAAAGTCA ACCACTTCCT 565 AAAAGGATTT TGCTGCA-GT AGATACCTGT AAGGCTGGAA TCTGCAAATC TGACCTCAAT 58828 ||| || || ||||||| | || ||||||| | |||||| | |||||||||| |||||||||| GAAA-GAATT TGCTGCANGC AGCTACCTGT AGGGCTGGGA TCTGCAAATC TGACCTCAAT 624 CCCTTCACAA AATGGCGAAT CCGCTCTTGT GGACTGAAGC AAAGCTGGGT GGCATACCTA 58768 || ||||||| || || |||| |||||||||| |||||||||| |||||||||| ||||||||| CCTTTCACAA AACGGTGAAT CCGCTCTTGT GGACTGAAGC AAAGCTGGGT GGCATACCTG 684 GATAATGCAC GACACTTAGC CTCATACGCA GTAACCGACA TCCTGCCTTG CTCTAGGCTC 58708 |||| ||||| | | ||||| |||||| ||| ||||| |||| |||||||||| || ||| ||| GATAGTGCAC AAAATTTAGC CTCATAAGCA GTAACAGACA TCCTGCCTTG CTATAGACTC 744 AAGAACTCAT CTCTACTCCT ATCCCTCTAA GTCCGGGGTA TATACTTCTC CATAAACAAG 58648 | |||||||| |||| ||||| ||||||| | |||||||||| || |||| || |||||| ||| AGGAACTCAT CTCTCCTCCT ATCCCTCAAC GTCCGGGGTA TACACTTTTC CATAAATAAG 804 CTAGAGAATG ATGCCCAAGT CATAGGCGGT GCCTGTGCTG GTTGACACTC GACATACGAT 58588 |||||||||| |||||||||| |||||| ||| | |||||||| |||||||||| |||||||| CTAGAGAATG ATGCCCAAGT CATAGGTGGT G-CTGTGCTG GTTGACACTC AACATACGAC 863 CGCCACCACA TTTTGGAATT TCCCTGAAAC TTATAGGTTA CAAACTCAAC ACCGAATCGT 58528 |||||||||| ||||| ||| ||||||||| | |||||| | |||||||||| ||||| ||| CGCCACCACA TTTTGACATT TCCCTGAAAT TGATAGGTCA CAAACTCAAC CCCGAACCGT 923 TCCACTATGC CCATCTTATG TAGAAACTCA TGACAATCAA CCACAAAATC ATAGGCATCC 58468 || |||||| |||||||||| ||| | |||| |||||||||| | | |||||| |||||||||| TCTACTATGT CCATCTTATG TAGCAGCTCA TGACAATCAA CAAGAAAATC ATAGGCATCC 983 TCAGATTCAG CACCCTTGAA GACTGGAGGT TTCAATTTCA AGAACTTATT GAAAAGTTCG 58408 |||||||||| |||||||||| |||| ||||| ||||| |||| |||| ||| | ||||||||| TCAGATTCAG CACCCTTGAA GACTAGAGGT TTCAACTTCA AGAATTTAGT GAAAAGTTCA 1043 TGCTGATCAC TTGTCATTAT AGGTCCTGTA GTCAATCGAG GAAACGTGCC TATTTCCAAT 58348 || ||||||| | |||||||| ||| |||||| |||||||||| |||| ||||| |||||||||| TGTTGATCAC TCGTCATTAT AGGCCCTGTA GTCAATCGAG GAAATGTGCC TATTTCCAAT 1103 GAGGCATCCA TGCGGGGAGC CATAGCAGCT GCATGTTGTA CTCCCGAAAC CTGAGGCGTT 58288 |||||||||| ||||| |||| || | ||||| |||||||||| |||||| ||| |||||| | | GAGGCATCCA TGCGGAGAGC CACAACAGCT GCATGTTGTA CTCCCGGAAC CTGAGGTGCT 1163 GGTGCAGAAA ACACTGGAGG TGTCTGGCCT TGATCAGATA ACCCGCTAAG ATAAGCAAGA 58228 ||| ||| || |||||||||| ||||||||| |||||||||| |||||||||| || || |||| GGTACAGGAA ACACTGGAGG TGTCTGGCCC TGATCAGATA ACCCGCTAAG ATGAGAAAGA 1223 ACCTGGTTAA TCATCTC 58211 |||||||| | ||||||| ACCTGGTTGA TCATCTC 1240 hqPGS_C08HBa0294K15.1-_SGN-U346572- (59089 58211) ******************************************************************************** EST sequence 85 +strand 890 n (File: SGN-U335939+) 1 ATAGCTGGAG CTCCCCGCGG TGGCGGCCGC TCTAGAACTA GTGGATCCCC CGGGCTGCAG 61 GGGAACACAT CCAAAAATTC TCAAACTACC AAAACTAATT CAATTGAGGG TACTTGGATA 121 GTGTCATCCT TGAGATGTGC CAAGAAGGAT AGACAACCCT TACTAACCAT CTTCTGAGCA 181 CAAAGAAAGG AGATAATACG CACCGGATTG GAAGTGTAGT CACCCTCCCA CACTAACGGA 241 TCTGTCCCAG GCTTGGCTAA CGTCACCGTT TTAGCATTAC AATCCAAGAT CGCAAAATTG 301 GGAGAAAGCC AAGTCATACC CAGAATTACA TCAAAGTCAC CCATTTCTAA AGTAACCAAA 361 TCTAGATAAG TGTTGCTCCC CACGAAATTC ACCAAACAAG ACCTATGTAC CTTTTCAACT 421 ATCACAGACT CACCCACCGG AGTAGAAACA CGAATAGGCA TGTCAAGTAA TTCACAATGC 481 AATTTTAGAC CATTAGCAAA TGATGAAGAT ACATATGAAA ACGTGGAGCC AGGGTCAAAT 541 AATACAGATG CCATGCAATC ACAAACCAAG AGATTACCTG TGATAACAGC ATCAGACGCC 601 TCTGCTTCAG ACCTCCCCAG GAAAGCATAA CAAGGGCCCC ATTATTTGTC TGGTCCGTGC 661 CCCTACATGN TGTGTAGTAG TGGCTCCATT TGCCCATCAC CTCTGCCGTT TTGGTGACGC 721 ATTTACTCGG NCACACGCCC TCAGAAATAC GACTCTACCA TTACACCTCT TCTCTAGCCA 781 TTGGGGTCTG TACTCTGTTT GGGACAGACT CTTAAGTGTC CATCTCTCAC ACCATAACAT 841 CTCGGGGTCC GCATCGGCTC TCAGAGAGTG TGACCGTCTG AGGTGACCCC Predicted gene structure (within gDNA segment 62521 to 55796): Exon 1 59950 59195 ( 756 n); cDNA 64 806 ( 743 n); score: 0.829 MATCH C08HBa0294K15.1- SGN-U335939+ 0.829 756 0.849 C PGS_C08HBa0294K15.1-_SGN-U335939+ (59950 59195) Alignment (genomic DNA sequence = upper lines): AACACATCCA AAAACTCACG GACTATCGAA ACCGACTCAA TTGAAGGTAC TTGGGTAGTA 59891 |||||||||| |||| || | |||| | || || | |||| |||| ||||| |||| |||| AACACATCCA AAAATTCTCA AACTACCAAA ACTAATTCAA TTGAGGGTAC TTGGATAGTG 123 TCATCCCTGA GGTGTGCCAA GAAAGCTAAA CACCCTTTAC TAACCATTCT CTTAGCACGA 59831 |||||| ||| | |||||||| ||| | || | || || |||| ||||||| | || ||||| | TCATCCTTGA GATGTGCCAA GAAGGATAGA CAACCCTTAC TAACCATCTT CTGAGCACAA 183 AGAAATGAGA TGATACGAAC TGGAGTGGGA GTGTAGTCAC CCTCCCACAC TAACGGATCT 59771 ||||| |||| | ||||| || ||| ||| | |||||||||| |||||||||| |||||||||| AGAAAGGAGA TAATACGCAC CGGATTGGAA GTGTAGTCAC CCTCCCACAC TAACGGATCT 243 GTCTCAGGCT TGGCCAATGT CACAGTTTTG GCATTACAGT CTAAGATTGC AAAGTTTGGA 59711 ||| |||||| |||| || || ||| ||||| |||||||| | | ||||| || ||| || ||| GTCCCAGGCT TGGCTAACGT CACCGTTTTA GCATTACAAT CCAAGATCGC AAAATTGGGA 303 GAAAGCCAAG TCATACCCAG AATTACATCG AAATCAACCA TTTCTAAGAT AACCAAGTCT 59651 |||||||||| |||||||||| ||||||||| || ||| ||| ||||||| | |||||| ||| GAAAGCCAAG TCATACCCAG AATTACATCA AAGTCACCCA TTTCTAAAGT AACCAAATCT 363 ACATGAGTAT TACTCCCCAT AAAAGTCACA AGACAAGACC TATACACCTT TTCAACTATC 59591 | || ||| | | ||||||| ||| |||| | |||||||| ||| ||||| |||||||||| AGATAAGTGT TGCTCCCCAC GAAATTCACC AAACAAGACC TATGTACCTT TTCAACTATC 423 ACAGACTCAC CCACCGGAGT AGAAACACGA ATAGGCATGT CAAGCAATTC ACAATGTAAA 59531 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| |||||| || ACAGACTCAC CCACCGGAGT AGAAACACGA ATAGGCATGT CAAGTAATTC ACAATGCAAT 483 TTAAGACCAG TAGCAAATGA GGAAGATACA TATGAAAATG TGGATCCAGG ATCAAATAAT 59471 || |||||| |||||||||| ||||||||| |||||||| | |||| ||||| ||||||||| TTTAGACCAT TAGCAAATGA TGAAGATACA TATGAAAACG TGGAGCCAGG GTCAAATAAT 543 ACAGAAGCCA TGCAATCACA AACCAAAAGA TTACCTGTGA TAACAACATC AGATGTCTCC 59411 ||||| |||| |||||||||| |||||| ||| |||||||||| ||||| |||| ||| | ||| ACAGATGCCA TGCAATCACA AACCAAGAGA TTACCTGTGA TAACAGCATC AGACGCCTCT 603 GCTTCAGACC TCCCAGGGAA AGCATAACAA TGGGCCCTAT CACCTGTCT- ATCCGTTGCC 59352 |||||||||| |||| |||| |||||||||| |||||| || | ||||| |||| |||| GCTTCAGACC TCCCCAGGAA AGCATAACAA -GGGCCCCAT TATTTGTCTG GTCCG-TGCC 661 CCTACCATGT TGTGCTGCAG TCGCTCCGGC TTGTCCGCCA CCCCGGTTGA TTTGTGTGAC 59292 |||| |||| |||| | || | ||||| ||| || || || | | | |||| |||| CCTA-CATGN TGTGTAGTAG TGGCTCC-AT TTGCCCATCA CCTCTGCCGT TTTG-GTGA- 717 CACCATTACC TCGGCCACCA TGTTCTCCAG AATAGCGGCC TCTTCCATGA CCACCTCTAC 59232 | |||| | |||| || || | || ||| || | | | ||| |||| | ||||||| C-GCATTTAC TCGGNCA-CA CGCCCT-CAG AA-ATACGAC TCTACCATTA -CACCTCT-T 771 CCCTGACTAT TGAAGGTCTG TAACTCTGTT TTGGACA 59195 | || | || || |||||| | |||||||| | ||||| CTCTAGCCAT TG-GGGTCTG T-ACTCTGTT TGGGACA 806 hqPGS_C08HBa0294K15.1-_SGN-U335939+ (59950 59195) ******************************************************************************** EST sequence 79 +strand 950 n (File: SGN-U335935+) 1 AGCTGGAGCT CACCGCGGTG GCGGCCGCTC TAGAACTAGT GGATCCCCCG GGCTGCAGGA 61 ATTCGGCACG AGGATCAATG CGAGGAAGAG GATACTTGTT CTTAATAGTT ACCTTGTTCA 121 GTTGTCTGTA GTCTATGCAC ATTCTAAAAC TTCCATCCTT CTTCTTCACA AATAAAACTG 181 GAGCACCCCA AGGAGATGCA CTTGGTCTAA TGAAGACCTT GCTCAACAAC TCTTGAAGTT 241 GAGCCTTTAA CTCTCTTAAT TCGGCGGGAG CCATTCTATA AGGGGGTATA GAAATGGGGC 301 GTGTGCCTGG TTCAAGATCG ATACAGAAGT CAATATCCCT ATCTGGTGGC ATACCAGGAA 361 GATCTGCAGG AAACACGTCC AAAAACTCGC GGACTACCGA AACCGACTCA ATTGAGGGTA 421 CTTGAGTAGT GTCATCCTTG AGATGTGCCA AGAAAGCTGA ACACCCTTTA CTAACCATTT 481 TCTTAGCACG AAGAAAGGAT ATGATACGCA CCAGATTGGA AGTGTAGTCA CCCTCCCACA 541 CTAACGGATC TGTCCCAGGC TTGGCTAACG TCACCGTTTT AGCATTACAA TCCAAGATCG 601 CAAAATTTGG AGAAAGCCAA GTCATACCCA GAATTACATC AATGTCACCC ATTTCTAAAA 661 AACCAAATCT ACATAAGTGT TGCTCCCCAC GAAATTCNAC AAAACAGAAC TATGTACCTT 721 TTCAACTACC ACAGACTCAC CCACCGGAGT AGAAACACGA ATANGCATGT CNAGTAAATT 781 CACATGGCAT TTTATACCAT TAGCAAATGA TGAAGATACA TATGAAAACG TGGAGCCAGG 841 GTCAAATAAT ACAGATGCCA TGTCATCACA AACCAAAAGA ATACCTGTGA TAACAGCATC 901 AGAACGCCCT CGCTTCAGAT TTCCCAAGGG AAAGCGTACA TTGGGGCCCC Predicted gene structure (within gDNA segment 61650 to 57078): Exon 1 60248 59374 ( 875 n); cDNA 74 948 ( 875 n); score: 0.868 MATCH C08HBa0294K15.1- SGN-U335935+ 0.868 875 0.921 C PGS_C08HBa0294K15.1-_SGN-U335935+ (60248 59374) Alignment (genomic DNA sequence = upper lines): ATCGATGTGA GGAAGAGGAT ACTTGTTCTT AACAGTTACC TTATTCAGTT GTCTGTAGTC 60189 ||| ||| || |||||||||| |||||||||| || ||||||| || ||||||| |||||||||| ATCAATGCGA GGAAGAGGAT ACTTGTTCTT AATAGTTACC TTGTTCAGTT GTCTGTAGTC 133 AATGCACATC CGAAAACTTC CATCCTTCTT CTTCACAAAC AAAACAGGAG TACCCCAAGG 60129 |||||||| | |||||||| |||||||||| ||||||||| ||||| |||| ||||||||| TATGCACATT CTAAAACTTC CATCCTTCTT CTTCACAAAT AAAACTGGAG CACCCCAAGG 193 GGATGCACTT GGTCTAAT-A AAACCTTTCC CTAACAACTC TTGAAGTTGG GCCTTTAACT 60070 ||||||||| |||||||| | | ||||| | | |||||||| ||||||||| |||||||||| AGATGCACTT GGTCTAATGA AGACCTTGCT C-AACAACTC TTGAAGTTGA GCCTTTAACT 252 CTCTTAACTC AGCGGGAGCC ATTCTATAAG GGGGTATGGA AATGGGGCGA GTACCCGGCT 60010 ||||||| || ||||||||| |||||||||| ||||||| || ||||||||| || || || | CTCTTAATTC GGCGGGAGCC ATTCTATAAG GGGGTATAGA AATGGGGCGT GTGCCTGGTT 312 CCAGATCAAT ACAGAAATCA ATATCTCTAT CTGGTGGCAT ACCAGAAAGG TCTGCAGGAA 59950 | ||||| || |||||| ||| ||||| |||| |||||||||| ||||| ||| |||||||||| CAAGATCGAT ACAGAAGTCA ATATCCCTAT CTGGTGGCAT ACCAGGAAGA TCTGCAGGAA 372 ACACATCCAA AAACTCACGG ACTATCGAAA CCGACTCAAT TGAAGGTACT TGGGTAGTAT 59890 |||| ||||| |||||| ||| |||| ||||| |||||||||| ||| |||||| || ||||| | ACACGTCCAA AAACTCGCGG ACTACCGAAA CCGACTCAAT TGAGGGTACT TGAGTAGTGT 432 CATCCCTGAG GTGTGCCAAG AAAGCTAAAC ACCCTTTACT AACCATTCTC TTAGCACGAA 59830 ||||| |||| ||||||||| |||||| ||| |||||||||| ||||||| || |||||||||| CATCCTTGAG ATGTGCCAAG AAAGCTGAAC ACCCTTTACT AACCATTTTC TTAGCACGAA 492 GAAATGAGAT GATACGAACT GGAGTGGGAG TGTAGTCACC CTCCCACACT AACGGATCTG 59770 |||| || || |||||| || || ||| || |||||||||| |||||||||| |||||||||| GAAAGGATAT GATACGCACC AGATTGGAAG TGTAGTCACC CTCCCACACT AACGGATCTG 552 TCTCAGGCTT GGCCAATGTC ACAGTTTTGG CATTACAGTC TAAGATTGCA AAGTTTGGAG 59710 || ||||||| ||| || ||| || ||||| | ||||||| || ||||| ||| || ||||||| TCCCAGGCTT GGCTAACGTC ACCGTTTTAG CATTACAATC CAAGATCGCA AAATTTGGAG 612 AAAGCCAAGT CATACCCAGA ATTACATCGA AATCAACCAT TTCTAAGATA ACCAAGTCTA 59650 |||||||||| |||||||||| |||||||| | ||| |||| |||||| | | ||||| |||| AAAGCCAAGT CATACCCAGA ATTACATCAA TGTCACCCAT TTCTAA-AAA ACCAAATCTA 671 CATGAGTATT ACTCCCCATA AAAGTC-ACA AGACAAGACC TATACACCTT TTCAACTATC 59591 ||| ||| || ||||||| ||| || ||| | || ||| | ||| ||||| |||||||| | CATAAGTGTT GCTCCCCACG AAATTCNACA AAAC-AGAAC TATGTACCTT TTCAACTACC 730 ACAGACTCAC CCACCGGAGT AGAAACACGA ATAGGCATGT CAAG-CAATT CACAATGTAA 59532 |||||||||| |||||||||| |||||||||| ||| |||||| | || |||| ||| ||| | ACAGACTCAC CCACCGGAGT AGAAACACGA ATANGCATGT CNAGTAAATT CAC-ATGGCA 789 ATTAAGACCA GTAGCAAATG AGGAAGATAC ATATGAAAAT GTGGATCCAG GATCAAATAA 59472 || | |||| ||||||||| | |||||||| ||||||||| ||||| |||| | |||||||| TTTTATACCA TTAGCAAATG ATGAAGATAC ATATGAAAAC GTGGAGCCAG GGTCAAATAA 849 TACAGAAGCC ATGCAATCAC AAACCAAAAG ATTACCTGTG ATAACAACAT CAG-ATGTCT 59413 |||||| ||| ||| ||||| |||||||||| | |||||||| |||||| ||| ||| | | | TACAGATGCC ATGTCATCAC AAACCAAAAG AATACCTGTG ATAACAGCAT CAGAACGCCC 909 CCGCTTCAGA CCTCCC-AGG GAAAGCATAA CAATGGGCCC 59374 ||||||||| |||| ||| |||||| | | || |||| || TCGCTTCAGA TTTCCCAAGG GAAAGCGT-A CATTGGGGCC 948 hqPGS_C08HBa0294K15.1-_SGN-U335935+ (60248 59374) ******************************************************************************** EST sequence 96 +strand 757 n (File: SGN-U317065+) 1 CGGAAACTCC CATCCTTCTT CTTCACAAAC AAAATCGGAG CACCCCAAGG AGATGCACTT 61 GGTCTAATGA AACCTTTGCT CAACAACTCT TGAAGTTGGG CCTTTAACTC TCTTAACTCT 121 ACGGGAGCCA TTCTATAAGG GGGTATAGAA ATGGGGCGTG TGCCCGGTTC AAGATCGATA 181 CAGAAGTCAA TATCCCTATC TGGTGGCATA CCAGGAAGAT CTGCAGGGAA CACATCCAAA 241 AACTCACAGA CTATAAAAAC CGACTCAATC GAAGGTACTT GGGTAGTGTC ATCCTTGAGA 301 TGTGCCAAGA AAGCTAAACA CCCTTTACTA ACCATTTTCT TAGCACGAAG AAAGGAGATG 361 ATGCACACCG GATTGGAAGT GTAGTCACCC TCCCACACTA ACGGATCTGT CCCAGGCTTG 421 GCTAATGTCA CCGTTTTAGC ATTACAATCC AAGATCGCAA ATTGCGGAGA AAGCCAAGTC 481 ATACCCAGAA TTACATCAAA ATCAACCATT TCTAAGATAA CCAAATCTAC ATAAGTGTTG 541 CTCCCCACAA AGTTCACCAA ACAAGACCTA TATACCTTTT CAACTACCAC AGACTCACCC 601 ACCGGAGTAG AAACACGAAT AGGCATATCA AGTAATTCAC AATGTAAATT TAGACCGTTA 661 GCAAATGAGG AAGATACANT AGAAAACGTG GATCCCAGGA TCAACAATAC AGAAGCCATG 721 CAATCACAAT CGAAAGATTA CCTGTGATGA CAGCATC Predicted gene structure (within gDNA segment 60859 to 58101): Exon 1 60178 59421 ( 758 n); cDNA 1 757 ( 757 n); score: 0.896 MATCH C08HBa0294K15.1- SGN-U317065+ 0.896 758 1.001 C PGS_C08HBa0294K15.1-_SGN-U317065+ (60178 59421) Alignment (genomic DNA sequence = upper lines): CGAAAACTTC CATCCTTCTT CTTCACAAAC AAAACAGGAG TACCCCAAGG GGATGCACTT 60119 || ||||| | |||||||||| |||||||||| |||| |||| ||||||||| ||||||||| CGGAAACTCC CATCCTTCTT CTTCACAAAC AAAATCGGAG CACCCCAAGG AGATGCACTT 60 GGTCTAATAA AACCTTTCCC TAACAACTCT TGAAGTTGGG CCTTTAACTC TCTTAACTCA 60059 |||||||| | ||||||| | ||||||||| |||||||||| |||||||||| ||||||||| GGTCTAATGA AACCTTTGCT CAACAACTCT TGAAGTTGGG CCTTTAACTC TCTTAACTCT 120 GCGGGAGCCA TTCTATAAGG GGGTATGGAA ATGGGGCGAG TACCCGGCTC CAGATCAATA 59999 ||||||||| |||||||||| |||||| ||| |||||||| | | ||||| || ||||| ||| ACGGGAGCCA TTCTATAAGG GGGTATAGAA ATGGGGCGTG TGCCCGGTTC AAGATCGATA 180 CAGAAATCAA TATCTCTATC TGGTGGCATA CCAGAAAGGT CTGCAGGAAA CACATCCAAA 59939 ||||| |||| |||| ||||| |||||||||| |||| ||| | ||||||| || |||||||||| CAGAAGTCAA TATCCCTATC TGGTGGCATA CCAGGAAGAT CTGCAGGGAA CACATCCAAA 240 AACTCACGGA CTATCGAAAC CGACTCAATT GAAGGTACTT GGGTAGTATC ATCCCTGAGG 59879 ||||||| || |||| |||| ||||||||| |||||||||| ||||||| || |||| |||| AACTCACAGA CTATAAAAAC CGACTCAATC GAAGGTACTT GGGTAGTGTC ATCCTTGAGA 300 TGTGCCAAGA AAGCTAAACA CCCTTTACTA ACCATTCTCT TAGCACGAAG AAATGAGATG 59819 |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| ||| |||||| TGTGCCAAGA AAGCTAAACA CCCTTTACTA ACCATTTTCT TAGCACGAAG AAAGGAGATG 360 ATACGAACTG GAGTGGGAGT GTAGTCACCC TCCCACACTA ACGGATCTGT CTCAGGCTTG 59759 || | || | || ||| ||| |||||||||| |||||||||| |||||||||| | |||||||| ATGCACACCG GATTGGAAGT GTAGTCACCC TCCCACACTA ACGGATCTGT CCCAGGCTTG 420 GCCAATGTCA CAGTTTTGGC ATTACAGTCT AAGATTGCAA AGTTTGGAGA AAGCCAAGTC 59699 || ||||||| | ||||| || |||||| || ||||| |||| | | ||||| |||||||||| GCTAATGTCA CCGTTTTAGC ATTACAATCC AAGATCGCAA ATTGCGGAGA AAGCCAAGTC 480 ATACCCAGAA TTACATCGAA ATCAACCATT TCTAAGATAA CCAAGTCTAC ATGAGTATTA 59639 |||||||||| ||||||| || |||||||||| |||||||||| |||| ||||| || ||| || ATACCCAGAA TTACATCAAA ATCAACCATT TCTAAGATAA CCAAATCTAC ATAAGTGTTG 540 CTCCCCATAA AAGTCACAAG ACAAGACCTA TACACCTTTT CAACTATCAC AGACTCACCC 59579 ||||||| || | |||| | |||||||||| || ||||||| |||||| ||| |||||||||| CTCCCCACAA AGTTCACCAA ACAAGACCTA TATACCTTTT CAACTACCAC AGACTCACCC 600 ACCGGAGTAG AAACACGAAT AGGCATGTCA AGCAATTCAC AATGTAAATT AAGACCAGTA 59519 |||||||||| |||||||||| |||||| ||| || ||||||| |||||||||| ||||| || ACCGGAGTAG AAACACGAAT AGGCATATCA AGTAATTCAC AATGTAAATT TAGACCGTTA 660 GCAAATGAGG AAGATACATA TGAAAATGTG GAT-CCAGGA TCAAATAATA CAGAAGCCAT 59460 |||||||||| |||||||| ||||| ||| ||| |||||| || || |||| |||||||||| GCAAATGAGG AAGATACANT AGAAAACGTG GATCCCAGGA TC-AACAATA CAGAAGCCAT 719 GCAATCACAA ACCAAAAGAT TACCTGTGAT AACAACATC 59421 |||||||| | | | |||||| |||||||||| ||| |||| GCAATCAC-A ATCGAAAGAT TACCTGTGAT GACAGCATC 757 hqPGS_C08HBa0294K15.1-_SGN-U317065+ (60178 59421) ******************************************************************************** EST sequence 81 +strand 878 n (File: SGN-U335937+) 1 TGGAGCTCCC CGCGGTGGCG GCCGCTCTAG AACTAGTGGA TCCCCCGGGC TGCAGGAATT 61 CGGCACGAGG GGATCTGTCC CAGGCTTGGC TAACGTCACA GTTTTAGCAT TACAATCCAA 121 GATTGCAAAA TTTGGAGAAA GCCAAGTCAT ACCCAGAATT ACATCAAAAT CAACCATTTC 181 TAAGATAACC AAGTCTACAT AAGTATTGCT CCCCACAAAA GTCACCAGAC CAGACCTATA 241 TACTTTTTCA ACTATCACAG ACTCACCCAC CGGAGTAGAA ACACGAATAG GCATGTCAAG 301 CAATTCATAA TTTAATTTAA GACCAGTAGC AAATGAGGAA GATACATATG AAAATGTGGA 361 TCCAGGGTCA AATAATACAA AAGCCATGCA ATCACAAAAA AAAAAAAAAA CTCGAGGGGG 421 GGCCCGGTAC CCAATTCGCC CTATAGTGAG TCGTATTACA ATTCACTGGC CGTCGTTTTA 481 CAACGTCGTG ACTGGGAAAA CCCTGGCGTT ACCCAACTTA ATCGCCTTGC AGCACATCCC 541 CCTTTCGCCA GCTGGCGTAA TAGCGAAGAG GCCCGCACCG ATCGCCCTTC CCAACAGTTG 601 CGCAGCCTGA ATGGCGAATG GCAAATTGTA AGCGTTAATA TTTTGTTAAA ATTCGCGTTA 661 AATTTTTGTT AAATCAGCTC ATTTTTTAAC CAATAGGCCG AAATCGGCAA AATCCCTTAT 721 AAATCAAAAG AATAGACCGA GATAGGGTTG AGTGGTGTTC CAGTTTGGAA CAGAAGTCAC 781 TATTTAAGAA CGTGGACTCC AACGTCCAAG GGCGAAAACG TCTATCTAGG CGAGGGCCAC 841 TACGTGGACA TCACCTAATT CAGTTTTTTG GGGCGNAG Predicted gene structure (within gDNA segment 61616 to 54039): Exon 1 59776 59435 ( 342 n); cDNA 71 412 ( 342 n); score: 0.924 MATCH C08HBa0294K15.1- SGN-U335937+ 0.924 342 0.390 C PGS_C08HBa0294K15.1-_SGN-U335937+ (59776 59435) Alignment (genomic DNA sequence = upper lines): GGATCTGTCT CAGGCTTGGC CAATGTCACA GTTTTGGCAT TACAGTCTAA GATTGCAAAG 59717 ||||||||| |||||||||| || |||||| ||||| |||| |||| || || ||||||||| GGATCTGTCC CAGGCTTGGC TAACGTCACA GTTTTAGCAT TACAATCCAA GATTGCAAAA 130 TTTGGAGAAA GCCAAGTCAT ACCCAGAATT ACATCGAAAT CAACCATTTC TAAGATAACC 59657 |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| TTTGGAGAAA GCCAAGTCAT ACCCAGAATT ACATCAAAAT CAACCATTTC TAAGATAACC 190 AAGTCTACAT GAGTATTACT CCCCATAAAA GTCACAAGAC AAGACCTATA CACCTTTTCA 59597 |||||||||| |||||| || ||||| |||| ||||| |||| ||||||||| || |||||| AAGTCTACAT AAGTATTGCT CCCCACAAAA GTCACCAGAC CAGACCTATA TACTTTTTCA 250 ACTATCACAG ACTCACCCAC CGGAGTAGAA ACACGAATAG GCATGTCAAG CAATTCACAA 59537 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || ACTATCACAG ACTCACCCAC CGGAGTAGAA ACACGAATAG GCATGTCAAG CAATTCATAA 310 TGTAAATTAA GACCAGTAGC AAATGAGGAA GATACATATG AAAATGTGGA TCCAGGATCA 59477 | ||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| TTTAATTTAA GACCAGTAGC AAATGAGGAA GATACATATG AAAATGTGGA TCCAGGGTCA 370 AATAATACAG AAGCCATGCA ATCACAAACC AAAAGATTAC CT 59435 ||||||||| |||||||||| |||||||| |||| | | || AATAATACAA AAGCCATGCA ATCACAAAAA AAAAAAAAAA CT 412 hqPGS_C08HBa0294K15.1-_SGN-U335937+ (59776 59435) ******************************************************************************** EST sequence 45 -strand 866 n (File: SGN-U335936-) 1 TGTAACTGAT CGAACAAATC ATCGATGCGA GGAAGAGGAT ACTGTTTCNT AATAGTACCN 61 TTATTCATTT GCNTATAGTC TATGCACATC AAAACTTTCT ATCCTTCTTC TTCACAATAA 121 AACAGGAGCA CCCCAAGGGG ATGCACTTGG CNTAATGAAG CCCTTACNTA ACAACTCTTG 181 AAGTTGGGCC TTTAACTCCC CCAACTCAGC GGGAGCCATT CTATAAGGGG GTATGGAAAT 241 GGGGTGATCA CCCGGCTCCA GATCAATGCA AAAGTCAATA TCCCTATCCG GTGGCATACC 301 AGGAAGGTCT GCAGGAAACA CATCCAGAAA CTCACGGACT ATCGAAACTG ACTCAATTGA 361 AGGTACTTGG GTAGTATCAT CCCTGAGGTG TGCCAAGAAA GCTAAACACC CTTTACTAAC 421 CATTCTCTTA GCACAAAGAA AGGAGATGAT ACGAACTGGA GTGGAAGTGT AGTCACCCTC 481 CCACACTAAC GCATCTATCT CAGGCTTGGC CAACGTTACA GTTTTAGCAT TACAATCCAA 541 GATTGCAAAA TTTGGAGACA GCCAAGTCAT ACCCAGAATT ACATCGAAGT CAACCATTTA 601 TAGGATAACC AAGTCTACAT GAGTATTGCT CCCACAAATG TCACAAGACA AGACCTATAC 661 ACCTTTTCAA CAATCACAGA CTCACCCACC GGAGTAGAAC ACGAATAGGT ATGTCAAGCG 721 ATTCACTATG TAAATTAAGA ACAGTAGCAA ATGAGGAAGA TACATATGAA AATGTGGAGG 781 CAGGATCAAA TCCTCGTGCC GAAGTAATGC AGCCCGGGGG ATCCACTAGG AATTAACGGC 841 CGCCACCGCG GGGAGCTCCA GCTCTA Predicted gene structure (within gDNA segment 61777 to 58007): Exon 1 60268 59476 ( 793 n); cDNA 1 789 ( 789 n); score: 0.913 MATCH C08HBa0294K15.1- SGN-U335936- 0.913 793 0.916 C PGS_C08HBa0294K15.1-_SGN-U335936- (60268 59476) Alignment (genomic DNA sequence = upper lines): TGTAACTGAT CGAACAAATC ATCGATGTGA GGAAGAGGAT ACTTGTTCTT AACAGTTACC 60209 |||||||||| |||||||||| ||||||| || |||||||||| ||| ||| | || ||| | TGTAACTGAT CGAACAAATC ATCGATGCGA GGAAGAGGAT ACTGTTTCNT AATAGTACCN 60 TTATTCAGTT GTCTGTAGTC AATGCACATC CGAAAACTTC CATCCTTCTT CTTCACAAAC 60149 ||||||| || | | ||||| |||||||| | ||| ||| ||||||||| |||||| || TTATTCATTT GCNTATAGTC TATGCACAT- CAAAACTTTC TATCCTTCTT CTTCAC-AAT 118 AAAACAGGAG TACCCCAAGG GGATGCACTT GGTCTAATAA AACCTTTCCC TAACAACTCT 60089 |||||||||| ||||||||| |||||||||| || |||| | | || || | |||||||||| AAAACAGGAG CACCCCAAGG GGATGCACTT GGCNTAATGA AGCCCTTACN TAACAACTCT 178 TGAAGTTGGG CCTTTAACTC TCTTAACTCA GCGGGAGCCA TTCTATAAGG GGGTATGGAA 60029 |||||||||| |||||||||| | |||||| |||||||||| |||||||||| |||||||||| TGAAGTTGGG CCTTTAACTC CCCCAACTCA GCGGGAGCCA TTCTATAAGG GGGTATGGAA 238 ATGGGGCGAG TACCCGGCTC CAGATCAATA CAGAAATCAA TATCTCTATC TGGTGGCATA 59969 |||||| || ||||||||| ||||||||| || || |||| |||| ||||| ||||||||| ATGGGGTGAT CACCCGGCTC CAGATCAATG CAAAAGTCAA TATCCCTATC CGGTGGCATA 298 CCAGAAAGGT CTGCAGGAAA CACATCCAAA AACTCACGGA CTATCGAAAC CGACTCAATT 59909 |||| ||||| |||||||||| |||||||| | |||||||||| |||||||||| ||||||||| CCAGGAAGGT CTGCAGGAAA CACATCCAGA AACTCACGGA CTATCGAAAC TGACTCAATT 358 GAAGGTACTT GGGTAGTATC ATCCCTGAGG TGTGCCAAGA AAGCTAAACA CCCTTTACTA 59849 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGGTACTT GGGTAGTATC ATCCCTGAGG TGTGCCAAGA AAGCTAAACA CCCTTTACTA 418 ACCATTCTCT TAGCACGAAG AAATGAGATG ATACGAACTG GAGTGGGAGT GTAGTCACCC 59789 |||||||||| |||||| ||| ||| |||||| |||||||||| |||||| ||| |||||||||| ACCATTCTCT TAGCACAAAG AAAGGAGATG ATACGAACTG GAGTGGAAGT GTAGTCACCC 478 TCCCACACTA ACGGATCTGT CTCAGGCTTG GCCAATGTCA CAGTTTTGGC ATTACAGTCT 59729 |||||||||| ||| |||| | |||||||||| ||||| || | ||||||| || |||||| || TCCCACACTA ACGCATCTAT CTCAGGCTTG GCCAACGTTA CAGTTTTAGC ATTACAATCC 538 AAGATTGCAA AGTTTGGAGA AAGCCAAGTC ATACCCAGAA TTACATCGAA ATCAACCATT 59669 |||||||||| | |||||||| ||||||||| |||||||||| |||||||||| ||||||||| AAGATTGCAA AATTTGGAGA CAGCCAAGTC ATACCCAGAA TTACATCGAA GTCAACCATT 598 TCTAAGATAA CCAAGTCTAC ATGAGTATTA CTCCCCATAA AAGTCACAAG ACAAGACCTA 59609 | || ||||| |||||||||| ||||||||| || |||| || | |||||||| |||||||||| TATAGGATAA CCAAGTCTAC ATGAGTATTG CT-CCCACAA ATGTCACAAG ACAAGACCTA 657 TACACCTTTT CAACTATCAC AGACTCACCC ACCGGAGTAG AAACACGAAT AGGCATGTCA 59549 |||||||||| |||| ||||| |||||||||| |||||||||| ||||||||| ||| |||||| TACACCTTTT CAACAATCAC AGACTCACCC ACCGGAGTAG -AACACGAAT AGGTATGTCA 716 AGCAATTCAC AATGTAAATT AAGACCAGTA GCAAATGAGG AAGATACATA TGAAAATGTG 59489 ||| |||||| ||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| AGCGATTCAC TATGTAAATT AAGAACAGTA GCAAATGAGG AAGATACATA TGAAAATGTG 776 GATCCAGGAT CAA 59476 || |||||| ||| GAGGCAGGAT CAA 789 hqPGS_C08HBa0294K15.1-_SGN-U335936- (60268 59476) ******************************************************************************** EST sequence 92 +strand 712 n (File: SGN-U326740+) 1 GAATCCCTTG ACAAATCGGC GGTAGTAGCT AGCTAACCCA ACAAAGCTCC TTATTTCTGA 61 CACATTAGTA GGTCTTACCC AATTCTTCAC TGTCTCAATC TTAGAAGGAT CCACCATCAC 121 TCCATCCTTA GAAACCACGT TCCCCAAGAA GGACACTACA TCTAGCCAAA ACTCACACTT 181 AGAGAACTTG GCATAAAACT TTTTCTCCCT CAACATTTCC AATACCATTC TCAAATGCTC 241 TTCATGTTCC TCCTTACTTT TAGAGTATAT CAGTATATCA TCAATAAATA CGATCACAAA 301 GAGATCCAAA TATGGCTTAA AAATCCCTTT TATTAAACTC ATAAACGCAG CAGGGGCATT 361 CATAAGACCA AAAGACATCA CTACAAATTT GTAATGCCCA TACCTGGTTC TAAAAGCAGT 421 CTTTGGCACA TCCGTTGCCC GTATTTTCAA TTGATGATAA CCGGATCTCA AGTCAATCTT 481 AGAAAAGACA CAAGCACCTT GTAACTGATC GAACAAGTCA TTAATGCGAG GAAGAGGATA 541 CTTGTTCTTT ATGGTTACCT TGTTCAACTG CCGGTAGCCT ATGCACATCC GAAAACTCCA 601 ATCCTTCTTC TTTACAAACA AAACCGGAGC ACCCCAAGGA GATGCAGTTG GTCTAATGAA 661 GCCTTTGCTC ACAACTCTTT GAAGTGGTCT TTTAACTCTC TTAACTCTGC GG Predicted gene structure (within gDNA segment 62240 to 57979): Exon 1 60766 60055 ( 712 n); cDNA 2 712 ( 711 n); score: 0.860 MATCH C08HBa0294K15.1- SGN-U326740+ 0.860 712 1.000 C PGS_C08HBa0294K15.1-_SGN-U326740+ (60766 60055) Alignment (genomic DNA sequence = upper lines): AATCCCTCGA TAAATCGATG GTAGTAGCTA GCTAAACCAA CAAAGCTACT TACCTCTGTA 60707 ||||||| || |||||| | |||||||||| ||||| |||| ||||||| || || |||| AATCCCTTGA CAAATCGGCG GTAGTAGCTA GCTAACCCAA CAAAGCTCCT TATTTCTGAC 61 ACATTAGTAG GTCTTTCCCA ACTCTTCACT GCTTCGATCT TAGAAGGATC CACAATCACT 60647 |||||||||| ||||| |||| | |||||||| | || |||| |||||||||| ||| |||||| ACATTAGTAG GTCTTACCCA ATTCTTCACT GTCTCAATCT TAGAAGGATC CACCATCACT 121 CCATCCTTAG AAACCACATG CCCCAAGAAG GACACTGAAT CTAGCCAAAA CTCACACTTG 60587 |||||||||| ||||||| | |||||||||| |||||| || |||||||||| ||||||||| CCATCCTTAG AAACCACGTT CCCCAAGAAG GACACTACAT CTAGCCAAAA CTCACACTTA 181 GAGAATTTGG CATTAAGCTT TTTCTCCCTC AACATTTCCA ATACCATTCT CAAGTGCTCC 60527 ||||| |||| ||| || ||| |||||||||| |||||||||| |||||||||| ||| ||||| GAGAACTTGG CATAAAACTT TTTCTCCCTC AACATTTCCA ATACCATTCT CAAATGCTCT 241 TCATGTTCTT TCTTGCTCTT TGAGTATACC AGTATATCAT CAACGAATAC AATGACAAAG 60467 |||||||| | ||| || || ||||||| | |||||||||| ||| ||||| || |||||| TCATGTTCCT CCTTACTTTT AGAGTATATC AGTATATCAT CAATAAATAC GATCACAAAG 301 AGATCTAGAT ATGGATTAAA GATTCCGTTC ATCAAGCTCA TGAACGCAGC AGGGGCATTC 60407 ||||| | || |||| ||||| || || || || || |||| | |||||||| |||||||||| AGATCCAAAT ATGGCTTAAA AATCCCTTTT ATTAAACTCA TAAACGCAGC AGGGGCATTC 361 GTAAGCCCAA AAGACATTAC TAAGAACTCG TAATACCCAT ATCTTGTTCG AAAAGCAGTC 60347 |||| |||| ||||||| || || || | | |||| ||||| | || |||| |||||||||| ATAAGACCAA AAGACATCAC TACAAATTTG TAATGCCCAT ACCTGGTTCT AAAAGCAGTC 421 TTGGGCACAT TCGTTGCCCA TATTTTCAAT TGATGATAAC CAGATCTCAA ATCAATTTTT 60287 || ||||||| |||||||| |||||||||| |||||||||| | |||||||| ||||| || TTTGGCACAT CCGTTGCCCG TATTTTCAAT TGATGATAAC CGGATCTCAA GTCAATCTTA 481 GAGAAGGTAC AAGCACCTTG TAACTGATCG AACAAATCAT CGATGTGAGG AAGAGGATAC 60227 || ||| || |||||||||| |||||||||| ||||| |||| ||| |||| |||||||||| GAAAAGACAC AAGCACCTTG TAACTGATCG AACAAGTCAT TAATGCGAGG AAGAGGATAC 541 TTGTTCTTAA CAGTTACCTT ATTCAGTTGT CTGTAGTCAA TGCACATCCG AAAACTTCCA 60167 |||||||| | |||||||| |||| || | |||| | | |||||||||| |||||| | | TTGTTCTTTA TGGTTACCTT GTTCAACTGC CGGTAGCCTA TGCACATCCG AAAACTCCAA 601 TCCTTCTTCT TCACAAACAA AACAGGAGTA CCCCAAGGGG ATGCACTTGG TCTAATAAAA 60107 |||||||||| | |||||||| ||| |||| | |||||||| | ||||| |||| |||||| || TCCTTCTTCT TTACAAACAA AACCGGAGCA CCCCAAGGAG ATGCAGTTGG TCTAATGAAG 661 CCTTTCCCTA ACAACTCTTG AAGTTGGGCC TTTAACTCTC TTAACTCAGC GG 60055 ||||| || ||||||||| | ||| | |||||||||| ||||||| || || CCTTT-GCTC ACAACTCTTT GAAGTGGTCT TTTAACTCTC TTAACTCTGC GG 712 hqPGS_C08HBa0294K15.1-_SGN-U326740+ (60766 60055) ******************************************************************************** EST sequence 72 +strand 800 n (File: SGN-U345415+) 1 AAAAGCTGGA GCTCCACCGC GGTGGCGGCC GCTCTAGAAC TAGTGGATCC CCCGGGCTGC 61 AGGGAACTCA TAATGCTCAT ACCTGGTCCG AAAAGCAGTC TTGGGCACAT CTGCTGCTCG 121 TATTTTCAAT TGATGATAAC CAGATCTCAA GTCGATTTTT GAGAAGGTAC AAGCACCTTG 181 TAACTGATCG AACAAATCAT CAATGTGAGG AAGATATTTT CGAAAATTCT CTCACTATGG 241 TGATTGACTC AATTGGAGGA ATATCGGACT CAAGATCTTT GACTCTTACA ATATGGTAAA 301 TTCACACTTT TGAGATTATT TTGCAATATT TTAAACAAGA GATGATATGA CCTTTAGGAA 361 TTAAATTACT GCCATTCCAC TCTAAGACAG GTTCATTAGG AAAGTTGAAT TTAACAACTC 421 TTGTTCGACA GTCTATGGAA GCATAACAAG CATGCAACCA ATCCATTCCC AAGATAAAAT 481 AAAAATCGAC CATATCGAAT TCCACCAAAT CCACCCAAGT AACTCTATTG GGGAAATATA 541 TAGGATAACT CCTAAAGACT CTTCTAGCAA CAATGGAGTC ACCTACCGGG GTTGTAACAA 601 AAAATATTTT CTCAAAGGCC TGGCGTCGAA TATGAAGAGA CATACTCACC CGTTATGGAT 661 GCAATAACAT TGGTTTATCT CATTAGTTTC ACAGTCCATG AGCAACTTGA AATGCATTTG 721 ATGGATGTGG TTACAACCTA CCTTTATGGA TCATTTAAAT ATGAGATATA CATGAAAATT 781 CCTGAAGGAT TTGCGATTGC Predicted gene structure (within gDNA segment 61838 to 53646): Exon 1 60382 60232 ( 151 n); cDNA 65 215 ( 151 n); score: 0.901 Intron 1 60231 59948 ( 284 n); Pd: 0.000 (s: 0.96), Pa: 0.000 (s: 0.64) Exon 2 59947 59564 ( 384 n); cDNA 216 599 ( 384 n); score: 0.547 MATCH C08HBa0294K15.1- SGN-U345415+ 0.647 535 0.669 C PGS_C08HBa0294K15.1-_SGN-U345415+ (60382 60232,59947 59564) Alignment (genomic DNA sequence = upper lines): AACTCGTAAT ACCCATATCT TGTTCGAAAA GCAGTCTTGG GCACATTCGT TGCCCATATT 60323 ||||| |||| | |||| || || |||||| |||||||||| |||||| | ||| | |||| AACTCATAAT GCTCATACCT GGTCCGAAAA GCAGTCTTGG GCACATCTGC TGCTCGTATT 124 TTCAATTGAT GATAACCAGA TCTCAAATCA ATTTTTGAGA AGGTACAAGC ACCTTGTAAC 60263 |||||||||| |||||||||| |||||| || |||||||||| |||||||||| |||||||||| TTCAATTGAT GATAACCAGA TCTCAAGTCG ATTTTTGAGA AGGTACAAGC ACCTTGTAAC 184 TGATCGAACA AATCATCGAT GTGAGGAAGA GGATACTTGT TCTTAACAGT TACCTTATTC 60203 |||||||||| ||||||| || |||||||||| TGATCGAACA AATCATCAAT GTGAGGAAGA T......... .......... .......... 215 AGTTGTCTGT AGTCAATGCA CATCCGAAAA CTTCCATCCT TCTTCTTCAC AAACAAAACA 60143 .......... .......... .......... .......... .......... .......... 215 GGAGTACCCC AAGGGGATGC ACTTGGTCTA ATAAAACCTT TCCCTAACAA CTCTTGAAGT 60083 .......... .......... .......... .......... .......... .......... 215 TGGGCCTTTA ACTCTCTTAA CTCAGCGGGA GCCATTCTAT AAGGGGGTAT GGAAATGGGG 60023 .......... .......... .......... .......... .......... .......... 215 CGAGTACCCG GCTCCAGATC AATACAGAAA TCAATATCTC TATCTGGTGG CATACCAGAA 59963 .......... .......... .......... .......... .......... .......... 215 AGGTCTGCAG GAAACACATC CAAAAACTCA CGGACTATCG AAACCGACTC AATTGAAGGT 59903 | | | |||| || | ||||| | | ||||| ||||| ||| .......... .....ATTTT CGAAAATTCT CTCACTATGG TGATTGACTC AATTGGAGGA 260 ACTTGGGTAG TATCATCCCT GAGGTGTGCC AAGAAAGCTA A-ACACCCTT TACTAACCAT 59844 | | || | ||| | || | | | || | | | | ||| ||| | | || ATATCGGACT CAAGATCTTT GA-CTCTTAC AATATGGTAA ATTCACACTT TTGAGATTAT 319 TCTCTTAGCA CGAAGAAATG AGATGATACG AACTGGA-GT GGGAGTGTAG TCACCCTCCC 59785 | | | | | | | |||||||| | | || | | | || | || | || TTTGCAATAT TTTAAACAAG AGATGATATG ACCTTTAGGA ATTAAATTAC T-GCCATTCC 378 ACACTAACGG ATCTGTCTCA GGCTTGGCCA ATGTCACAGT TTTGGCATTA CAGTCTAAGA 59725 || |||| | | | | || | | || | ||| | | | | ||||||| | ACTCTAAGAC AGGTTCATTA GGAAAGTTGA ATTTAACAAC TCTTGTTCGA CAGTCTATGG 438 TTGCAAAGTT TGGAGAAAGC CAAGTCATAC CCAGAATTAC ATCGAAATCA ACCATTTCTA 59665 ||| | | | | | ||| ||| | ||| || | || ||||| ||||| || | AAGCATAACA AGCATGCAAC CAATCCATTC CCAAGATAAA ATAAAAATCG ACCATATCGA 498 AGATAACCAA GTCTACATGA GTATTACTCC CCATAAAAGT CACAAGACAA GACCTATACA 59605 | ||||| || || | ||| || ||| | | || || |||| | | ATTCCACCAA ATCCACCCAA GTAACTCTAT TGGGGAAATA TATAGGATAA CTCCTAAAGA 558 CCTTTTCAAC TATCACAGAC TCACCCACCG GAGTAGAAAC A 59564 | || | | | | || ||||| |||| | || | ||| | CTCTTCTAGC AACAATGGAG TCACCTACCG GGGTTGTAAC A 599 hqPGS_C08HBa0294K15.1-_SGN-U345415+ (60382 60232) ******************************************************************************** EST sequence 98 +strand 587 n (File: SGN-U328094+) 1 CCTCTGTAAG AATAGTGTGA ATCAAATCGT CGGCACGGGG TACACATACC TTTCCCTTAA 61 TCCTCAAAAC ACCTTCCTTA TCGATTTTTG CTTCTTTAGC CTCTCCTCGC ATTACCTTAT 121 CTCGAATCCA GATCAGTTTC TCATCGGTAA ACTGCTTTCC TTTAATCTTA TCAAGAAAGG 181 AAGATCTTGC CTCCACACAA GCCAAAAATT CTCCCTTCTC ATTTAATTCT AGCCTCATAA 241 GGTCATTAGC CAGAGTCTGA ACCTCTCTAG CCAATGGGCA TCTAGAAACC TGCAAGTGAG 301 CTAGACTTCC CATGCTCCCT GCCTTTCTAC TTAAAGCATC TGCCACAACA TTAGCCTTTC 361 CCGGATGATA CAAGATAGTG ATATCATAGT CCTTCAGTAG CTCCATCGAT CTCCTCTGTC 421 TCAAATTCAA ATCTTTCTGA GTAAAGACAT ACTGTAAACT ACGATGATCC ATATAGACTT 481 CACACTTAAC CCCATAGAGA TAATGTCTCT ATTACTTTAA TGCAATCACT ACTGCCGCTA 541 ACTCCAAATC ATGGGTCGGA TAATTACGTT CATGCACCTT TAATTGC Predicted gene structure (within gDNA segment 62217 to 60376): Exon 1 61581 60996 ( 586 n); cDNA 1 586 ( 586 n); score: 0.942 MATCH C08HBa0294K15.1- SGN-U328094+ 0.942 586 0.998 C PGS_C08HBa0294K15.1-_SGN-U328094+ (61581 60996) Alignment (genomic DNA sequence = upper lines): CCTTTGTAAG AATAGTGTGA ATCAAATCAT CGACACGGGG TACACATACC CTTCCCTTAA 61522 ||| |||||| |||||||||| |||||||| | || ||||||| |||||||||| ||||||||| CCTCTGTAAG AATAGTGTGA ATCAAATCGT CGGCACGGGG TACACATACC TTTCCCTTAA 60 TTCTCAAAAC ACCTTCCTCA TCGATTTTTG CTTCTTTAGC CTCTCCTCGC AACACCTTAT 61462 | |||||||| |||||||| | |||||||||| |||||||||| |||||||||| | ||||||| TCCTCAAAAC ACCTTCCTTA TCGATTTTTG CTTCTTTAGC CTCTCCTCGC ATTACCTTAT 120 CTCGGATCCG GATCAGTTTC TCATCGGTAA ACTGTTTTCC TTTAATCTTA TCAAGAAAGG 61402 |||| |||| |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| CTCGAATCCA GATCAGTTTC TCATCGGTAA ACTGCTTTCC TTTAATCTTA TCAAGAAAGG 180 AAGATCTTGC CTCCACACAG GCCAAAAATC CTCCCTTCCC ATTTACTTCT AGCCTCATAA 61342 |||||||||| ||||||||| ||||||||| |||||||| | ||||| |||| |||||||||| AAGATCTTGC CTCCACACAA GCCAAAAATT CTCCCTTCTC ATTTAATTCT AGCCTCATAA 240 AGTCATTAGC CAGAGTCTGA ACCTCTCTAG CCAATGGGCG TCTAGAAACC TGCAAGTGGG 61282 ||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||| | GGTCATTAGC CAGAGTCTGA ACCTCTCTAG CCAATGGGCA TCTAGAAACC TGCAAGTGAG 300 CTAGACTTCC CATGCTCCCT GCCTTTCTAC TTAAAGCATC TGCCACAACA TTAGCTTTTC 61222 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CTAGACTTCC CATGCTCCCT GCCTTTCTAC TTAAAGCATC TGCCACAACA TTAGCCTTTC 360 CCGGATGATA CAAAATAGTG ATATCATAGT CCTTCAGTAG TTCCATCCAC CTTCTCTGTC 61162 |||||||||| ||| |||||| |||||||||| |||||||||| |||||| | || ||||||| CCGGATGATA CAAGATAGTG ATATCATAGT CCTTCAGTAG CTCCATCGAT CTCCTCTGTC 420 TCAAATTCAA ATCTTTCTAA GTAAAGACAT ACAGTAAACT ACGATGATCC GTATAGACTT 61102 |||||||||| |||||||| | |||||||||| || ||||||| |||||||||| ||||||||| TCAAATTCAA ATCTTTCTGA GTAAAGACAT ACTGTAAACT ACGATGATCC ATATAGACTT 480 CACACTTAAC CCCATATAGA TAATGTCTCT ATTGCTTTAA TGCAAACACT ACCGCAGCCA 61042 |||||||||| |||||| ||| |||||||||| ||| |||||| ||||| |||| || || || | CACACTTAAC CCCATAGAGA TAATGTCTCT ATTACTTTAA TGCAATCACT ACTGCCGCTA 540 ACTCCCAATC ATGGGTCGGA TAATTACGTT CATGCACCTT TAATTG 60996 ||||| |||| |||||||||| |||||||||| |||||||||| |||||| ACTCCAAATC ATGGGTCGGA TAATTACGTT CATGCACCTT TAATTG 586 hqPGS_C08HBa0294K15.1-_SGN-U328094+ (61581 60996) ******************************************************************************** EST sequence 90 +strand 890 n (File: SGN-U336382+) 1 TGGAGCTCAC CGCGGTGGCG GCCGCTCTAC AACTAGTGGA TCCCCCGGGC TGCAGGCTCG 61 GCATGTACTG TTTTCCAAAA CTTAGAAGTA AATTGCGTAC CTCTATCTGA TATGATGGAG 121 AGTGGAACTC CGTGCAATCG AACAATTTCT AAGATGTAAA GTTTGGCTAA CTTCTCTGCA 181 TTGTAAGTCA CCTTAACCGA AATAGAGTGA GCAGACTTAG TTAATCTGTC AACAATCACC 241 CAAATAGAGT CATACCTACC CATCGTCTTT GGATGACTAA CCACGAAGTC CATTGCAATT 301 CTCTCCCACT TCCATTCAGG AATGGGCATT CTCTGAAGTG TCCCTCCAGG CCTCTGGTGT 361 TCATACTTTA CTTGCTGACA ATTCGGGCAT TGAGCAACAA AATTAACAAT GTCACGCTTC 421 ATCCTACTCC ACCAAAAATG TTGCTTTAGG TCACGATACA TCTTGTTTGC ACCAGGATGT 481 ATAGAGTACT TCGAACTATG AGCCTATATA AGAATAGTGT GAATCAAATC ATCGACGCGG 541 GGTACACATA CTCCTTCCCT TATTCTCAAA ACACCTTCCT CATCGATTTT TGCTTCTTTA 601 GCCTCTCCTC GCAATACCTT ATCTCGAATC GGGATCAGTT TCTCATCAGT GAACTGCTTT 661 CCCTTAATCT TGTCAAGAAA GGAAGATTTT GCTTCCCCAC AGGCCAGAAT CCCTCCCTCT 721 CATTTACTTC TAGNCCCTAA GGGCATTAAC CAGAGTCTGA ACCTCTCTAC CCAATGGGCA 781 TTTAGAAAAC GGCAAGGGGG GGAAAATTTC CATGGTCCCC CCTTTCTAAT TAAAAATTCC 841 GCCCGAAATT AACCTTTCTG GAGGAACCAG AAAAGGAATT GGAGCCCTCT Predicted gene structure (within gDNA segment 63871 to 58397): Exon 1 62022 61247 ( 776 n); cDNA 62 834 ( 773 n); score: 0.903 MATCH C08HBa0294K15.1- SGN-U336382+ 0.903 776 0.872 C PGS_C08HBa0294K15.1-_SGN-U336382+ (62022 61247) Alignment (genomic DNA sequence = upper lines): CATGCAATGT TTTCCAAAAC ATAGAAGTAA ACTGCGTACC CCTATTTGAT ATAATGGAAA 61963 |||| | ||| |||||||||| ||||||||| | |||||||| |||| |||| || ||||| | CATGTACTGT TTTCCAAAAC TTAGAAGTAA ATTGCGTACC TCTATCTGAT ATGATGGAGA 121 GTGGAACTCC ATGCAATCGA ACAATTTCTG AGATGTAAAG TTTGGCCAAC TTCTCTGCAT 61903 |||||||||| ||||||||| ||||||||| |||||||||| |||||| ||| |||||||||| GTGGAACTCC GTGCAATCGA ACAATTTCTA AGATGTAAAG TTTGGCTAAC TTCTCTGCAT 181 TATAAGTCAC CTTGACCGGA ATGAAATGAG CAGACTTAGT TAATTTGTCA ACAATTACCC 61843 | |||||||| ||| |||| | || | |||| |||||||||| |||| ||||| ||||| |||| TGTAAGTCAC CTTAACCGAA ATAGAGTGAG CAGACTTAGT TAATCTGTCA ACAATCACCC 241 AAATGGAGTC ATACTTACCC ATTGTCTTTG GAAGACCAAC CACGAAGTCC ATTGCAATTC 61783 |||| ||||| |||| ||||| || ||||||| || ||| ||| |||||||||| |||||||||| AAATAGAGTC ATACCTACCC ATCGTCTTTG GATGACTAAC CACGAAGTCC ATTGCAATTC 301 TCTCCCACTT CCATTCAGGA ATGGACATTC TCTGAAGTGT CCCTCCAGGC CTCTGGTGTT 61723 |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| TCTCCCACTT CCATTCAGGA ATGGGCATTC TCTGAAGTGT CCCTCCAGGC CTCTGGTGTT 361 CATACTTTAC TTGCTGACAA TTCGGGCATT GAGCAACAAA ATCAACAATG TCACGCTTCA 61663 |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| CATACTTTAC TTGCTGACAA TTCGGGCATT GAGCAACAAA ATTAACAATG TCACGCTTCA 421 TCCTACTCCA CAAAAAATGT TGCTTTAGAT CACGATACAT CTTGGTTGCA CCAGGATGTA 61603 |||||||||| | |||||||| |||||||| | |||||||||| |||| ||||| |||||||||| TCCTACTCCA CCAAAAATGT TGCTTTAGGT CACGATACAT CTTGTTTGCA CCAGGATGTA 481 TAGAATACCT TGAACTATGA GCCTTTGTAA GAATAGTGTG AATCAAATCA TCGACACGGG 61543 |||| ||| | ||||||||| |||| | ||| |||||||||| |||||||||| ||||| |||| TAGAGTACTT CGAACTATGA GCCTATATAA GAATAGTGTG AATCAAATCA TCGACGCGGG 541 GTACACATAC -CCTTCCCTT AATTCTCAAA ACACCTTCCT CATCGATTTT TGCTTCTTTA 61484 |||||||||| ||||||||| ||||||||| |||||||||| |||||||||| |||||||||| GTACACATAC TCCTTCCCTT -ATTCTCAAA ACACCTTCCT CATCGATTTT TGCTTCTTTA 600 GCCTCTCCTC GCAACACCTT ATCTCGGATC CGGATCAGTT TCTCATCGGT AAACTGTTTT 61424 |||||||||| |||| ||||| |||||| ||| ||||||||| ||||||| || ||||| ||| GCCTCTCCTC GCAATACCTT ATCTCGAATC GGGATCAGTT TCTCATCAGT GAACTGCTTT 660 CCTTTAATCT TATCAAGAAA GGAAGATCTT GCCTCCACAC AGGCCAAAAA TCCTCCCTTC 61364 || ||||||| | |||||||| ||||||| || || ||| ||| |||||| || |||||| || CCCTTAATCT TGTCAAGAAA GGAAGATTTT GCTTCCCCAC AGGCCAGAAT CCCTCCC-TC 719 CCATTTACTT CTAGCCTCAT AAAGTCATTA GCCAGAGTCT GAACCTCTCT AGCCAATGGG 61304 ||||||||| |||| | | | || | ||||| ||||||||| |||||||||| | |||||||| TCATTTACTT CTAGNC-CCT AAGGGCATTA ACCAGAGTCT GAACCTCTCT ACCCAATGGG 778 CGTCTAGAAA CCTGCAAGTG GGCTAGACTT CCCATGCTCC CTGCCTTTCT ACTTAAA 61247 | | |||||| | ||||| | || | | || ||||| ||| | ||||||| | ||||| CATTTAGAAA ACGGCAAGGG GGGGAAAATT TCCATGGTCC C-CCCTTTCT AATTAAA 834 hqPGS_C08HBa0294K15.1-_SGN-U336382+ (62022 61247) ******************************************************************************** EST sequence 88 +strand 790 n (File: SGN-U336381+) 1 AAAAGCTGGA GCTCCACCGC GGTGGCGGCC GCTCTAGAAC TAGTGGATCC CCCGGGCTGC 61 AGGGTAAACT GCATACCTCT ATCTGATATG ATGGAGAGTG GAACTCCATG CAATCGAACG 121 ATTTCTGAGA TATAGATTCT GACTAACTTC TCTACATTGT AGGTCACCTT GACCGGAATG 181 CAATGAGCAG ACTTAGTCAA TCTGTCAACA ATTACACAAA TGGAGTCATA CTTACCCATT 241 GTCTTTGGAA GGCCAACCAC GAAGTCCATT GCAATTCTCT CCCACTTCCA TTCAGGAATG 301 GGCATTCTCT GAAGTGTCCG TCCAGGCCTT TGCTGTTCAT ACTTTACATG CTGACCATTC 361 GGTTAGAAAT GCTAATGGAC GCTACTTTCC CACTAGTTCA AAATTTGTGA AGCCACGGGC 421 TTGCTTGAAG ATTGGTCTTG GTCTCTTAAC AAAACAGATC CGCTGATATG TTTCTAATTA 481 TGCAGAGGAT TTTGCAAGAA AGAGTTGTTA GTAGCCGGGA AGCTGAACTC AATAGATTGA 541 AGCAGGAGAG ACGAGAAAGG ATCAGCCAGA TAATTCAATC AAGGAAGCAG GAGAGGGAAG 601 CTAAGAGGAA AATGTTATTC TTTCTGCGAA CTGAGGAGGA GCGTCAAAAG AGGTTACTGG 661 AAGAGGAGGA AGCCCGCAAA CGTGAAGGTT CTCCTGTGGG AAGCCGGACT TGCTAAGGGG 721 GGGGCCCGGT ACCCAATTCG CCCTATAGTG AGTCGTATTA CAATTCACTG GCCGTCGTTT 781 TACAACGTCG Predicted gene structure (within gDNA segment 64117 to 56421): Exon 1 61995 61698 ( 298 n); cDNA 65 362 ( 298 n); score: 0.913 MATCH C08HBa0294K15.1- SGN-U336381+ 0.913 298 0.377 C PGS_C08HBa0294K15.1-_SGN-U336381+ (61995 61698) Alignment (genomic DNA sequence = upper lines): TAAACTGCGT ACCCCTATTT GATATAATGG AAAGTGGAAC TCCATGCAAT CGAACAATTT 61936 |||||||| | ||| |||| | ||||| |||| | |||||||| |||||||||| ||||| |||| TAAACTGCAT ACCTCTATCT GATATGATGG AGAGTGGAAC TCCATGCAAT CGAACGATTT 124 CTGAGATGTA AAGTTTGGCC AACTTCTCTG CATTATAAGT CACCTTGACC GGAATGAAAT 61876 ||||||| || | | || | ||||||||| |||| || || |||||||||| |||||| ||| CTGAGATATA GATTCTGACT AACTTCTCTA CATTGTAGGT CACCTTGACC GGAATGCAAT 184 GAGCAGACTT AGTTAATTTG TCAACAATTA CCCAAATGGA GTCATACTTA CCCATTGTCT 61816 |||||||||| ||| ||| || |||||||||| | |||||||| |||||||||| |||||||||| GAGCAGACTT AGTCAATCTG TCAACAATTA CACAAATGGA GTCATACTTA CCCATTGTCT 244 TTGGAAGACC AACCACGAAG TCCATTGCAA TTCTCTCCCA CTTCCATTCA GGAATGGACA 61756 ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || TTGGAAGGCC AACCACGAAG TCCATTGCAA TTCTCTCCCA CTTCCATTCA GGAATGGGCA 304 TTCTCTGAAG TGTCCCTCCA GGCCTCTGGT GTTCATACTT TACTTGCTGA CAATTCGG 61698 |||||||||| ||||| |||| ||||| || | |||||||||| ||| |||||| | |||||| TTCTCTGAAG TGTCCGTCCA GGCCTTTGCT GTTCATACTT TACATGCTGA CCATTCGG 362 hqPGS_C08HBa0294K15.1-_SGN-U336381+ (61995 61698) ******************************************************************************** EST sequence 53 +strand 930 n (File: SGN-U339540+) 1 GGAGCTCCCC GCGGTGGCGG CCGCTCTAGA ACTAGTGGAT CCCCCGGGCT GCAGGAAGAG 61 ATTCGATGGA GAAAGTGAAG TCTATTCAAG AAAAGCTTCT AGCGGCGCAA AGTAGACAAA 121 AAGAATATGC AGATCGAAAG GTTAGAGACT TAGAGTTCAT GGAGGGCGAA CAAGTCTTGT 181 TGAAAGTCTC GCCAATGAAA GGGGTGATGC GGTTTCGTAA AAGAGGTAAG TTAAGTCCAA 241 GGTATATTGG ACCATTTGAG GTACTAAAGC GAGTAGGGGA GGTGGCTTAT GAATTAGCCT 301 TACCTCCAGG GCTGTCCGGA GTACATCCGG TATTTCATGT ATCCATGTTG AAAAGATACC 361 ATGGAGATGG AAACTACATC ATCCGTTGGG ATTCAGTTTC GCTTGGTGAG AATTGGACTT 421 ATGAGGAGGA ACCAGTTGCT ATTTTAGATA GAGAGGTTCG CAAGTTGAGG TCGAGAGAAA 481 TTGCATCCAT CAAAGTTCAA TGGAAGAATC GACCGGTTGA AGAAGCTACT TGGGAGAAGG 541 AGGCAGATAT GCAAGAAAAA TACCCACATC TGTTTACAGA TTCAGGTACT CCTTTTCGCC 601 ATTGTTTTTC TTCATTTGAT CGTTCGGGGA CGAACGATGG GTAAATTGGT ATCTATTGTA 661 ACGACCTGTT TAGTCGTTTT GAGCAGCAGA TTTTAATTCT GGAAAAACTG GCCAAGACCA 721 CGGGCACTGC GACGGACCGT CACAGGCACG ACGGCCCGTC GAAGGTGCAT CGTTTCAGCA 781 TACTTAGAAT TTCTGAATTT GGATATGAAA ATCGACTCTC TTTAATTTTG TGACGACCTG 841 CAGACGTGCC ATCACATCCA CGACGAACCG TCGTGAGTTC CCGTTGCAAA CACTTNCACT 901 TTTGAGATTT GGTACAGAAA CGAGTTCTGA Predicted gene structure (within gDNA segment 60571 to 65985): Exon 1 62326 62972 ( 647 n); cDNA 76 723 ( 648 n); score: 0.858 Intron 1 62973 63147 ( 175 n); Pd: 0.000 (s: 0.68), Pa: 0.000 (s: 0.81) Exon 2 63148 63189 ( 42 n); cDNA 724 765 ( 42 n); score: 0.810 Intron 2 63190 64351 (1162 n); Pd: 0.000 (s: 0.81), Pa: 0.932 (s: 0) Exon 3 64352 64357 ( 6 n); cDNA 766 771 ( 6 n); score: 0.833 Intron 3 64358 64398 ( 41 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0) Exon 4 64399 64418 ( 20 n); cDNA 772 791 ( 20 n); score: 0.750 MATCH C08HBa0294K15.1+ SGN-U339540+ 0.858 715 0.769 C PGS_C08HBa0294K15.1+_SGN-U339540+ (62326 62972,63148 63189,64352 64357,64399 64418) Alignment (genomic DNA sequence = upper lines): TGAAATGCAT ACAAGAAAAG CTTTTAGCGG CTCAAAGTAG ACAGGAAGAA TATGCAGATC 62385 |||| | || ||||||||| ||| |||||| | |||||||| ||| ||||| |||||||||| TGAAGTCTAT TCAAGAAAAG CTTCTAGCGG CGCAAAGTAG ACAAAAAGAA TATGCAGATC 135 GAAAGGTTAG AGACTTGGAG TTTATCGAGG GTGAACAAGT CTTGCTGAAG GTTTCACCCA 62445 |||||||||| |||||| ||| || || |||| | |||||||| |||| |||| || || || | GAAAGGTTAG AGACTTAGAG TTCATGGAGG GCGAACAAGT CTTGTTGAAA GTCTCGCCAA 195 TGAAAGGGGT GATGCGGTTC GGTAAGCGAG GTAAGCTTAG TCCGAGGTAC ATTGGTCCAT 62505 |||||||||| ||||||||| |||| ||| ||||| | || ||| ||||| ||||| |||| TGAAAGGGGT GATGCGGTTT CGTAAAAGAG GTAAGTTAAG TCCAAGGTAT ATTGGACCAT 255 TTGAAGTTCT GAAGCGCGTG GGGGAGGTAG CTTATGAATT AGCCTTGCCC CCAGGACTCT 62565 |||| || || ||||| || |||||||| | |||||||||| |||||| || ||||| || | TTGAGGTACT AAAGCGAGTA GGGGAGGTGG CTTATGAATT AGCCTTACCT CCAGGGCTGT 315 CAGGAGTGCA CCTGGTATTT CATGTGTCTA TGTTGAAAAG ATACCACGGG GATGGAAACT 62625 | ||||| || | ||||||| ||||| || | |||||||||| |||||| || |||||||||| CCGGAGTACA TCCGGTATTT CATGTATCCA TGTTGAAAAG ATACCATGGA GATGGAAACT 375 ACATCATTCA TTGGGATTCA GTTCTTCTTG ATGAGAATTT ATCTTATGAG GAGGAGTCTG 62685 ||||||| | |||||||||| ||| |||| |||||||| |||||||| ||||| | | ACATCATCCG TTGGGATTCA GTTTCGCTTG GTGAGAATTG GACTTATGAG GAGGAACCAG 435 TTGCTATTTT AGATAGAGAA GTCCGCAAGT TGAGGTCAAG GGAGATTGCA TCCATCAAGG 62745 |||||||||| ||||||||| || ||||||| ||||||| || || |||||| |||||||| | TTGCTATTTT AGATAGAGAG GTTCGCAAGT TGAGGTCGAG AGAAATTGCA TCCATCAAAG 495 TTCAATGGAA GAATCGACCA ATTGAAAAGT CCACTTGGGA GAAGGAGGCT GATATGCAAG 62805 |||||||||| ||||||||| ||||| | | |||||||| ||||||||| |||||||||| TTCAATGGAA GAATCGACCG GTTGAAGAAG CTACTTGGGA GAAGGAGGCA GATATGCAAG 555 AAAAATACCC ACACCTGTTT ACAGATTCAG GTACTCCTTT TCGCCCTTGT TTTTCTTCTT 62865 |||||||||| ||| |||||| |||||||||| |||||||||| ||||| |||| |||||||| | AAAAATACCC ACATCTGTTT ACAGATTCAG GTACTCCTTT TCGCCATTGT TTTTCTTCAT 615 GTGATCGTTC GGGGACAAAC GATGGGTAAA TTGGTATCTA TTGTAACGAC CTG-TTAGTC 62924 ||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| ||| |||||| TTGATCGTTC GGGGACGAAC GATGGGTAAA TTGGTATCTA TTGTAACGAC CTGTTTAGTC 675 GTTTTGAGCA GTAGAGTTT- ATTCTAGTAA TAGTTGTCTG GGTCGACGGA TCCCACGACG 62983 |||||||||| | ||| ||| ||||| | || | || | | | |||| GTTTTGAGCA GCAGATTTTA ATTCT-GGAA AAACTGGCCA AGACCACGG. .......... 723 GACCGTCGAA GGGGTCTCGT TCCAAAACAC TTAGATTCTA AAATTTTGGG TACTGAGAAC 63043 .......... .......... .......... .......... .......... .......... 723 AACTATCTGA ACTTCGCGAC GACATGGCAG GACGGACCGT CGTGGGCACG ATGGACCGTC 63103 .......... .......... .......... .......... .......... .......... 723 ACAGACCCTT TAATGAAATT CAGTCTCTGA ACTTTGTGAC GGAAGCAGCA GGACGGACCG 63163 ||| ||||||||| .......... .......... .......... .......... ....GCACTG CGACGGACCG 739 TCGCAGGCAC GACGGGCCGT CACAGGCTGC GTAACCCTGA CTGAGTCGGA TTTCTGTTAA 63223 || ||||||| ||||| |||| | ||| TCACAGGCAC GACGGCCCGT CGAAGG.... .......... .......... .......... 765 ATGTTTTAAG GGGCGTTTTG GACTATTCCT GCTTATAATT GTAAAGTTAG TGGGTTAATG 63283 .......... .......... .......... .......... .......... .......... 765 TTAATAATTC AATTACTTGG GGGTTAAAGG TGATAACCTT GAAATAAATA GTGGGTTACT 63343 .......... .......... .......... .......... .......... .......... 765 TTTACCATCT TTTATACTTA ATTATATGGT AATTAGGGTA AAAGAAAAAG AGTTTGAATA 63403 .......... .......... .......... .......... .......... .......... 765 AGGAAAAATA GAAAGAACAG AAGAGAGGGA CGAACGAGCG AGAGAAGATA GAACGAAGAG 63463 .......... .......... .......... .......... .......... .......... 765 GAAAGCAAAG ACCTTGAAGA GTAGCTTGCG TGATCACGAA TTCTTCGATG GAAGTAGGTT 63523 .......... .......... .......... .......... .......... .......... 765 ATGGTTTATG TTATTTCATA GTAAACTCTT AATAGCGAAT GATATGTATT GGGTAGTATT 63583 .......... .......... .......... .......... .......... .......... 765 GTAAAGTCTT CTATATGCTT AATTGTATGC TTGCATGATG TGATTATGTA AGTGTAATGA 63643 .......... .......... .......... .......... .......... .......... 765 GTTGGAAAGA TGAGGTTGTG AAGCTTAAAC CTAAAACCCT CTGTGTTAAT GATGATGCCT 63703 .......... .......... .......... .......... .......... .......... 765 TGGTATAAAA GAAGGCTTGA TGAACTAAAA GAATGAGGTT AGTGGATCAG GTGTCACGTT 63763 .......... .......... .......... .......... .......... .......... 765 CCGACACCAG GATAGTAGTA GTGAATCGGG TGTCACGTTC CGACACTAGG ATAGTAATAG 63823 .......... .......... .......... .......... .......... .......... 765 TGGATCGGGT CACGTTCCGA CACCAGGATA GTAATAGTGG ATCGGGTGTC ACGTTCTGAC 63883 .......... .......... .......... .......... .......... .......... 765 ACCAAGATAC TAGTAATGGA TCGGGTGTCA CGTTCCGACA CCAGGATAGT AGTAATGGAT 63943 .......... .......... .......... .......... .......... .......... 765 CGGGTATCAC GTTCCGACAC CAGGATAGTA GTAGTGGATC GGGTGTCACG GTAGTAGTGG 64003 .......... .......... .......... .......... .......... .......... 765 ATCGGGTGTC ACGTTCTGAC ACCAGGATAG TAGTAGAGGA TCGGAGTGTC ACGTTCCGAC 64063 .......... .......... .......... .......... .......... .......... 765 ACCAGGATAG TAAAAAGAAT GAATCTTGAA TCATGTTAAT ATACTCAGGT TTAAAGAAAC 64123 .......... .......... .......... .......... .......... .......... 765 TATTTCCCAA ACGAGTATGG TGTGGAGGCG TGAGTACTCA TGGATGCGCT TGGGTTGTGG 64183 .......... .......... .......... .......... .......... .......... 765 CCAATGGTTA TGGTACTTGT TGTTGTTGTC TGTTGAGTAT TGTAGTTGAT TTTATGTTAT 64243 .......... .......... .......... .......... .......... .......... 765 TATCTGATAT ATGTTATTTT CTATTTTGAG TTGGCCGATG ATACCTACTC AGTACTTGTG 64303 .......... .......... .......... .......... .......... .......... 765 CCTTGTACTG ACCCCTACTT GTATGTTTCT TTCTTGTTAT TTTTGGAGTG CAGCAAACGT 64363 || || | .......... .......... .......... .......... ........TG CATC...... 771 GCCATCGACT TCGACTCAAC CGCAACTCTA GCCAGACTTC AGCATAATCA GATTT 64418 ||| |||||| | | || || .......... .......... .......... .....GTTTC AGCATACTTA GAATT 791 hqPGS_C08HBa0294K15.1+_SGN-U339540+ (62326 62972,63148 63189) ******************************************************************************** EST sequence 39 +strand 926 n (File: SGN-U335319+) 1 GTCATAAAGC TTGGAGCTCC ACCGCGGTGG CNGGCCGCTC TAGAACTAGT GGATCCCCCG 61 GGCTGCAGGA ATTCGGCACG AGGGGAAAAA CTGGCAGAAA TGACGGACCC CACGACGGAC 121 CATCATGGGC ACGACGGACC GTCGCAGGGT CTCATTTCAA AACACTTAGG AAATCTGAAA 181 TTGGGTACTG AAAATCGACT CTCTGAACTT CGTAACGGAA TGGCAAGACG GACCGTCACA 241 GGCGTGATGG ACCATCACAG AGTCTTCAGT GAAAATCCAG TCTCTGAACC TTGCGACGAC 301 CTGCAGGACG GACCGTCGCA GGCACAACGG GCTGTCACAG GCTGCGTAAA TCCCAGTCTG 361 AGTCGGAATT CCTCAATTGT TTTAAGGGAC GTTTTTGACT ATTCCTGCTT TAATTATAAA 421 GTTAGTGGGT TAATGTTAAT AAGTCTAATT ACTTGGGGGT TAAAAGAGGT AACCTTAAGT 481 TAATTAGTGG GTTATTATTG CCATATTTTA TTCTTAATTA TATACTAATT AGGGTAAAAG 541 AAAGAGGGTT TGAATAAAGA AAATAGAAAG AACAAGAGAA AGAGAGAGAA AGTCGAACGA 601 GAAAGAGGAT CGAACGAGAG GAAAAAACAC AAAGCTTGGG AAATCACTTG CTTGATCACG 661 AATCTTCGGT GGAGGTAGGT TATGGTTTCT CTTACGATAT TCGTAGTAAG CTCTTAATAG 721 CGAATAATAT GTATTGATAA TATTGTAAAC CCTTCTATGT GCTAAATTGT GTGCTTGCAT 781 GAATGTATTA TATAATTGTG ATTATATAAG CATGATGAAT TTATTGAATC CCAAATCTTG 841 CAAAACCCTG ATCTTTTTGT TAATGATGAA GCCCTAATAT TAAAAAGGCC TGATGAACTA 901 AAATTATGAA ATTGATGATC CCTGGA Predicted gene structure (within gDNA segment 59531 to 68541): Exon 1 62977 63643 ( 667 n); cDNA 130 804 ( 675 n); score: 0.768 Intron 1 63644 65347 (1704 n); Pd: 0.000 (s: 0.79), Pa: 0.000 (s: 0) Exon 2 65348 65378 ( 31 n); cDNA 805 834 ( 30 n); score: 0.710 MATCH C08HBa0294K15.1+ SGN-U335319+ 0.768 698 0.754 C PGS_C08HBa0294K15.1+_SGN-U335319+ (62977 63643,65348 65378) Alignment (genomic DNA sequence = upper lines): CACGACGGAC CGTCGAAGGG GTCTCGTTCC AAAACACTTA GATTCTAAAA TTTTGGGTAC 63036 |||||||||| ||||| | || ||||| || | |||||||||| | | | |||||||| CACGACGGAC CGTCGCA-GG GTCTCATTTC AAAACACTTA GGAAATCTGA AATTGGGTAC 188 TGAGAA-CAA CTATCTGAAC TTCGCGACGA CATGGCAGGA CGGACCGTCG TGGGCACGAT 63095 ||| || | | || ||||||| |||| ||| |||||| || ||||||||| ||| ||| TGAAAATCGA CTCTCTGAAC TTCGTAACGG AATGGCAAGA CGGACCGTCA CAGGCGTGAT 248 GGACCGTCAC AGACCCTTTA ATG-AAATTC AGTCTCTGAA CTTTGTGACG GAAGCAGCAG 63154 ||||| |||| ||| ||| | || |||| | |||||||||| | ||| ||| | | | |||| GGACCATCAC AGAGTCTTCA GTGAAAATCC AGTCTCTGAA CCTTGCGAC- G-ACCTGCAG 306 GACGGACCGT CGCAGGCACG ACGGGCCGTC ACAGGCTGCG T-AA-CCCTG ACTGAGTCGG 63212 |||||||||| ||||||||| |||||| ||| |||||||||| | || ||| | ||||||||| GACGGACCGT CGCAGGCACA ACGGGCTGTC ACAGGCTGCG TAAATCCCAG TCTGAGTCGG 366 ATTTCTGTTA AATGTTTTAA GGGGCGTTTT GGACTATTCC TGCTTATAAT TGTAAAGTTA 63272 | ||| | | | |||||||| ||| |||||| ||||||||| ||||| |||| | |||||||| AATTC-CTCA ATTGTTTTAA GGGACGTTTT TGACTATTCC TGCTT-TAAT TATAAAGTTA 424 GTGGGTTAAT GTTAATAATT C-AATTACTT GGGGGTTAAA GGTGATAACC TTGAAATAAA 63331 |||||||||| |||||||| | | |||||||| |||||||||| | | ||||| || | ||| GTGGGTTAAT GTTAATAAGT CTAATTACTT GGGGGTTAAA AGAGGTAACC TTAAGTTAAT 484 TAGTGGGTTA CTTTTACCAT CTTTTATACT TAATTATATG GTAATTAGGG TAAAAGAAAA 63391 |||||||||| | || |||| |||||| || ||||||||| ||||||||| ||||||||| TAGTGGGTTA TTATTGCCAT ATTTTATTCT TAATTATATA CTAATTAGGG TAAAAGAAAG 544 AGAGTTTGAA TAAGGAAAAA TAGAAAGAAC -AGA-AGAGA GGGACGAA-- CGAGCGAG-- 63445 || ||||||| ||| | |||| |||||||||| ||| | ||| | || || ||| |||| AGGGTTTGAA TAAAG-AAAA TAGAAAGAAC AAGAGAAAGA GAGAGAAAGT CGAACGAGAA 603 AGAAGATAGA ACGA-AGAGG AAAGCAAAGA CCTTGAAGAG TAGCTTGCGT GATCACGAAT 63504 ||| ||| || |||| || ||| || | | |||| | | ||||| | ||||||||| AGAGGATCGA ACGAGAGGAA AAAACACAAA GCTTGGGAAA TCACTTGCTT GATCACGAA- 662 TCTTCGATGG AAGTAGGTTA TGGTTTATGT T---AT-TTC ATAGTAAACT CTTAATAGCG 63560 |||||| ||| | |||||||| |||||| | | | || ||| |||||| || |||||||||| TCTTCGGTGG AGGTAGGTTA TGGTTTCTCT TACGATATTC GTAGTAAGCT CTTAATAGCG 722 AATGATATGT ATTGGGTAGT ATTGTAAAGT CTTCTATATG CTTAATTGTA TGCTTGCATG 63620 ||| |||||| ||| | || | |||||||| ||||||| || || |||||| |||||||||| AATAATATGT ATT-GATAAT ATTGTAAACC CTTCTATGTG CTAAATTGTG TGCTTGCATG 781 -ATGTGATTA TGTAAGTGTA ATGAGTTGGA AAGATGAGGT TGTGAAGCTT AAACCTAAAA 63679 |||| |||| | ||| ||| || | AATGT-ATTA TATAATTGTG ATTA...... .......... .......... .......... 804 CCCTCTGTGT TAATGATGAT GCCTTGGTAT AAAAGAAGGC TTGATGAACT AAAAGAATGA 63739 .......... .......... .......... .......... .......... .......... 804 GGTTAGTGGA TCAGGTGTCA CGTTCCGACA CCAGGATAGT AGTAGTGAAT CGGGTGTCAC 63799 .......... .......... .......... .......... .......... .......... 804 GTTCCGACAC TAGGATAGTA ATAGTGGATC GGGTCACGTT CCGACACCAG GATAGTAATA 63859 .......... .......... .......... .......... .......... .......... 804 GTGGATCGGG TGTCACGTTC TGACACCAAG ATACTAGTAA TGGATCGGGT GTCACGTTCC 63919 .......... .......... .......... .......... .......... .......... 804 GACACCAGGA TAGTAGTAAT GGATCGGGTA TCACGTTCCG ACACCAGGAT AGTAGTAGTG 63979 .......... .......... .......... .......... .......... .......... 804 GATCGGGTGT CACGGTAGTA GTGGATCGGG TGTCACGTTC TGACACCAGG ATAGTAGTAG 64039 .......... .......... .......... .......... .......... .......... 804 AGGATCGGAG TGTCACGTTC CGACACCAGG ATAGTAAAAA GAATGAATCT TGAATCATGT 64099 .......... .......... .......... .......... .......... .......... 804 TAATATACTC AGGTTTAAAG AAACTATTTC CCAAACGAGT ATGGTGTGGA GGCGTGAGTA 64159 .......... .......... .......... .......... .......... .......... 804 CTCATGGATG CGCTTGGGTT GTGGCCAATG GTTATGGTAC TTGTTGTTGT TGTCTGTTGA 64219 .......... .......... .......... .......... .......... .......... 804 GTATTGTAGT TGATTTTATG TTATTATCTG ATATATGTTA TTTTCTATTT TGAGTTGGCC 64279 .......... .......... .......... .......... .......... .......... 804 GATGATACCT ACTCAGTACT TGTGCCTTGT ACTGACCCCT ACTTGTATGT TTCTTTCTTG 64339 .......... .......... .......... .......... .......... .......... 804 TTATTTTTGG AGTGCAGCAA ACGTGCCATC GACTTCGACT CAACCGCAAC TCTAGCCAGA 64399 .......... .......... .......... .......... .......... .......... 804 CTTCAGCATA ATCAGATTTC AGGGTGAGCT ATTGTTCCTA GTTCGGACTG GATTCTTTCC 64459 .......... .......... .......... .......... .......... .......... 804 TTCGCGTCTT GATGTCTTGA AGTTCGGACA TGGACCATCT CTTTTACTTA TTTTAGCTTC 64519 .......... .......... .......... .......... .......... .......... 804 TTAGATACTC TTAGATTTAG TAATTTGAGG ATAGATGTTC TTGTGATGAT GACTTCCAGA 64579 .......... .......... .......... .......... .......... .......... 804 TTTTGGGGAT AATGATAAGT TTTGAGTTTT AGAAGTTAAT TGTTGATTTC GTTAATGAGT 64639 .......... .......... .......... .......... .......... .......... 804 TTTAAGTCTT CCGCATTATA TTCTATTTAT TATCGTTGAA TTGTTTGGGT TTAGATTGGT 64699 .......... .......... .......... .......... .......... .......... 804 TTGTTCGCTC ACATAGGAGG GTAAGTATGG GTGCCACTCG CGGCCTGTTT TGGGTCGTGA 64759 .......... .......... .......... .......... .......... .......... 804 CAGTAGGAAA TCAAACTCTA AGTCGAGGAC TTTCTACACA AAATGGTATA AATATAATTA 64819 .......... .......... .......... .......... .......... .......... 804 TTTAATTTAG TATCGGTTAA CCCGTTAAGA AAAAACTTCA AACCGTTAAG AACCGATAAC 64879 .......... .......... .......... .......... .......... .......... 804 CCGATAACAA AAAAATCAAA ACCGTTATTA AAACCACTAA ACTAATAACC CAATACTATA 64939 .......... .......... .......... .......... .......... .......... 804 AACCAATAAC TTTTTTATCG ATTCGGCTTA TCGGTTTCGA TTCGATTTTG AACTGCCCTA 64999 .......... .......... .......... .......... .......... .......... 804 TGGACGTGTA TCTAAATTTA ATCAATTAAG TAGAAAAATA TTTTTAAAGG CATCAATAAT 65059 .......... .......... .......... .......... .......... .......... 804 TTAAAACAAA ACTAATAATT TACTTTAAAT TTAGAAATAT TCTCAATACT TTCGCTCTTT 65119 .......... .......... .......... .......... .......... .......... 804 TATAAATTTA TATAAATTAG AACAATAAAA AGATCCAGCC TTCAAATGGC TGTCAATATT 65179 .......... .......... .......... .......... .......... .......... 804 CTTTTCAAAA TTCAAATTTA TCTATAAATC TCTCTTATTT ACTTCCCACA ACGATCATCA 65239 .......... .......... .......... .......... .......... .......... 804 GGTCCATATC TATTCAATAT TCACACTTGC GTCAACATAA TGTCCACTTC ACATTCGTAG 65299 .......... .......... .......... .......... .......... .......... 804 AAAATGATTG GCTATATATA ATAATTTATA ATTTAAGTTA CTTGACACCA TAGAGCATGT 65359 | || |||||| .......... .......... .......... .......... ........TA TA-AGCATGA 815 GGACATTATT CAATTTCAA 65378 || ||||| ||| ||| TGAATTTATT GAATCCCAA 834 hqPGS_C08HBa0294K15.1+_SGN-U335319+ (62977 63643,65348 65378) ******************************************************************************** EST sequence 69 -strand 969 n (File: SGN-U335080-) 1 GTGGAGGTAG GTAATGGTTT AAGTATTTCC ATAGTAACTT TTAATAGCAA TTGATATGTA 61 TTGGGTAGTA TTGTAAAGTC TTTTATATGC TTAATTGTAT GCTTGCATGA TGTGATTATG 121 AAATTGTAAT GGGTTGGAAA GATAAGGTTG TGAAGCTTAA AACCTAAAAC CCTCTTTGTT 181 AATGATGATG TCTTGGTATA AAAGAAGGCT TGATGAACTA AAAGAATGAG GTTAGGGGAT 241 CGGGTGTCAC GAACCGACAC GTAGTATTAA TGGATCGGGT GTCACGAACC GACACATAGT 301 ATTAATGGAT CGGGTGTCAC GAATCGGCAC GTAGTATTAG GAGATCGGGT GTAACGAACC 361 GACACGTAGT ATTAGGGGAT CGGGTGTCAC GAACCGACAC GTAGCATTAG GGGATCGGAG 421 TATCACGTTC CGACACCACG ATAGTAAAAA GAATGAATCT TGAATTATGT TAATGTACTC 481 AATTTAATGA ACCTGTTTCC CAAATGAGTA TGGTGTGGAG GCTTGAGTCC TCATAGATGT 541 TCTTGGGTTG TGCCCAATGG TTATGGTACT TGTTGTTGTC ACCTGTTAAG TGTTATGGTT 601 GATTTTATTT TATTATTTGA TATATATTGT TCTCTATTCT GAGTTGGCCG ATGATATCTA 661 CTCAGTACTC GTGTTTGTAC TGACCCCTAC TTTTATGTTT TCTTTTTGTT AATTGTGGAG 721 TGCAGCAAAC GTACCGTCGT CTTCAACTCA ACCGCAACTC TAACCAGTCT TCATCACGTC 781 AGATTTCAGG GTGAGCTATT GTTCCTAGCT CGGACTGGAT TCTCTCTCAT TCATGTCTTG 841 ATGTCCTTGA AGATCAGACA TGCTGGTGCC GAATTCCTGC AGCCCGGGGG ATCCACTAGT 901 TCTAGAGCGG CAGCCACCGC GGTGANGCCG ATCGCATTGC ATTTCATTNN NNNNNNNGNA 961 NACTCTCGT Predicted gene structure (within gDNA segment 62443 to 66650): Exon 1 63512 63809 ( 298 n); cDNA 2 295 ( 294 n); score: 0.891 Intron 1 63810 63850 ( 41 n); Pd: 0.000 (s: 0.78), Pa: 0.000 (s: 0.72) Exon 2 63851 63963 ( 113 n); cDNA 296 400 ( 105 n); score: 0.752 Intron 2 63964 64028 ( 65 n); Pd: 0.000 (s: 0.76), Pa: 0.000 (s: 0.88) Exon 3 64029 64491 ( 463 n); cDNA 401 862 ( 462 n); score: 0.856 MATCH C08HBa0294K15.1+ SGN-U335080- 0.855 874 0.902 C PGS_C08HBa0294K15.1+_SGN-U335080- (63512 63809,63851 63963,64029 64491) Alignment (genomic DNA sequence = upper lines): TGGAAGTAGG TTATGGTTTA TGTTATTTCA TAGTAAACTC TTAATAGCGA ATGATATGTA 63571 |||| ||||| | |||||||| || || || |||| |||| |||||||| | ||||||||| TGGAGGTAGG TAATGGTTTA AGTATTTCCA TAGT-AACTT TTAATAGCAA TTGATATGTA 60 TTGGGTAGTA TTGTAAAGTC TTCTATATGC TTAATTGTAT GCTTGCATGA TGTGATTATG 63631 |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| TTGGGTAGTA TTGTAAAGTC TTTTATATGC TTAATTGTAT GCTTGCATGA TGTGATTATG 120 TAAGTGTAAT GAGTTGGAAA GATGAGGTTG TGAAGCTT-A AACCTAAAAC CCTCTGTGTT 63690 || |||||| | |||||||| ||| |||||| |||||||| | |||||||||| ||||| |||| AAATTGTAAT GGGTTGGAAA GATAAGGTTG TGAAGCTTAA AACCTAAAAC CCTCTTTGTT 180 AATGATGATG CCTTGGTATA AAAGAAGGCT TGATGAACTA AAAGAATGAG GTTAGTGGAT 63750 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| AATGATGATG TCTTGGTATA AAAGAAGGCT TGATGAACTA AAAGAATGAG GTTAGGGGAT 240 CAGGTGTCAC GTTCCGACAC CAGGATAGTA GTAGTGAATC GGGTGTCACG TTCCGACACT 63810 | |||||||| | |||||| | | ||||| || || ||| |||||||||| ||||||| CGGGTGTCAC GAACCGACA- C--G-TAGTA TTAATGGATC GGGTGTCACG AACCGACAC. 295 AGGATAGTAA TAGTGGATCG GGTCACGTTC CGACACCAGG ATAGTAATAG TGGATCGGGT 63870 |||||| || |||||||||| .......... .......... .......... .......... ATAGTATTAA TGGATCGGGT 315 GTCACGTTCT GACACCAAGA TACTAGTAAT GGATCGGGTG TCACGTTCCG ACACCAGGAT 63930 |||||| | ||| || || ||| | ||||||||| | ||| ||| ||| | | | GTCACGAATC GGCACGTAG- TATTAG-GA- -GATCGGGTG TAACGAACCG ACA-C--G-T 367 AGTAGTAATG GATCGGGTAT CACGTTCCGA CACCAGGATA GTAGTAGTGG ATCGGGTGTC 63990 |||| || | |||||||| | |||| |||| ||| AGTATTAGGG GATCGGGTGT CACGAACCGA CAC....... .......... .......... 400 ACGGTAGTAG TGGATCGGGT GTCACGTTCT GACACCAGGA TAGTAGTAGA GGATCGGAGT 64050 | ||| | ||| |||||||||| .......... .......... .......... ........G- TAGCATTAGG GGATCGGAGT 421 GTCACGTTCC GACACCAGGA TAGTAAAAAG AATGAATCTT GAATCATGTT AATATACTCA 64110 ||||||||| ||||||| || |||||||||| |||||||||| |||| ||||| ||| |||||| ATCACGTTCC GACACCACGA TAGTAAAAAG AATGAATCTT GAATTATGTT AATGTACTCA 481 GGTTTAAAGA AACTATTTCC CAAACGAGTA TGGTGTGGAG GCGTGAGTAC TCATGGATGC 64170 ||||| || | || ||||| |||| ||||| |||||||||| || ||||| | |||| |||| -ATTTAATGA ACCTGTTTCC CAAATGAGTA TGGTGTGGAG GCTTGAGTCC TCATAGATGT 540 GCTTGGGTTG TGGCCAATGG TTATGGTACT TGTTGTTGTT GTCTGTTGAG TATTGTAGTT 64230 ||||||||| || ||||||| |||||||||| ||||||||| ||||| || | || | ||| TCTTGGGTTG TGCCCAATGG TTATGGTACT TGTTGTTGTC ACCTGTTAAG TGTTATGGTT 600 GATTTTATGT TATTATCTGA TATATGTTAT TTTCTATTTT GAGTTGGCCG ATGATACCTA 64290 |||||||| | |||||| ||| ||||| || | | |||||| | |||||||||| |||||| ||| GATTTTATTT TATTATTTGA TATATATTGT TCTCTATTCT GAGTTGGCCG ATGATATCTA 660 CTCAGTACTT GTGCCTTGTA CTGACCCCTA CTTGTATGTT TCTTTCTTGT TATTTTTGGA 64350 ||||||||| ||| ||||| |||||||||| ||| |||||| | || |||| || || |||| CTCAGTACTC GTG-TTTGTA CTGACCCCTA CTTTTATGTT TTCTTTTTGT TAATTGTGGA 719 GTGCAGCAAA CGTGCCATCG ACTTCGACTC AACCGCAACT CTAGCCAGAC TTCAGCATAA 64410 |||||||||| ||| || ||| |||| |||| |||||||||| ||| |||| | |||| || GTGCAGCAAA CGTACCGTCG TCTTCAACTC AACCGCAACT CTAACCAGTC TTCATCA-CG 778 TCAGATTTCA GGGTGAGCTA TTGTTCCTAG TTCGGACTGG ATTCT-T-TC CTTCGCGTCT 64468 |||||||||| |||||||||| |||||||||| ||||||||| ||||| | || ||| |||| TCAGATTTCA GGGTGAGCTA TTGTTCCTAG CTCGGACTGG ATTCTCTCTC ATTCATGTCT 838 TGATGT-CTT GAAGTTCGGA CATG 64491 |||||| ||| |||| || || |||| TGATGTCCTT GAAGATCAGA CATG 862 hqPGS_C08HBa0294K15.1+_SGN-U335080- (63512 63809,63851 63963,64029 64491) ******************************************************************************** EST sequence 21 +strand 809 n (File: SGN-U335078+) 1 NTTGAAAACA AAAGCTGGAG CTCCACCGCG GTGGCGGCCG CTCTAGAACT AGTGGATCCC 61 CCGGGCTGCA GGAATTCGGC ACCAGCCCTA ATCTACTTTG TTAATAATGA TGCCTTGGTA 121 TAAAAGAAGG CTTGATGAAC GAAAGTGGTG AGATTAGGGG ATCGGGTGCC ACGTTCCGGT 181 ACCAGGATAG AATATGGATC GGGTGTCACG TTCCGACACC AGGATAGAAT ATGGATCGGG 241 TGCCACGTTC CGGTACCAGG ATAGAATATG GATCGGGTGT CACGTTCCGA CACCAGGATA 301 GAATATGGAT CGGGTGTCAC GTTCTGACAC CAGGATAGAA TATGGATCGG GTGCCACGTT 361 CCGGTGCCAG GATAGTATAT TGAGGAGTGG AGTGTCACGT AAGGACACGA GGGGAATAAA 421 TATGATGAAT CTTGAAATAT GTTAATATAT GCAATCCAAT GAACTAAATT CCCAAATAAG 481 TATGATGAGG AGGTGTGAGT CCTCATTGAT GTGCTTGGTG ATGCAACCAA GGGTTATGGT 541 AATTGCAAAT GCTGCATGCT AAGGATATTA GTTAATTTTA TGATATTGCT TAATACATAC 601 TGGTATCTAT TTTGAGTTGG CCGACGATGT CTACTCAATA CCCGTGTTTT GTACTGACCC 661 CTACTTTTAT TGTTACTTCC TGGGTATTTG GGGAGAGCAG CAAACGTGCC GTCACCTTAT 721 ACTTCACCGT AACTCAAGGC TGGCTTTACT ACAATGGAAA ATTCAGGGGG GGCTGATGTT 781 TCCTACTGGG ACTTGGACAT TTTTTTTTG Predicted gene structure (within gDNA segment 62035 to 69353): Exon 1 63684 63973 ( 290 n); cDNA 96 377 ( 282 n); score: 0.848 Intron 1 63974 64033 ( 60 n); Pd: 0.000 (s: 0.84), Pa: 0.000 (s: 0.72) Exon 2 64034 64422 ( 389 n); cDNA 378 767 ( 390 n); score: 0.724 MATCH C08HBa0294K15.1+ SGN-U335078+ 0.777 679 0.839 C PGS_C08HBa0294K15.1+_SGN-U335078+ (63684 63973,64034 64422) Alignment (genomic DNA sequence = upper lines): CTGTGTTAAT GATGATGCCT TGGTATAAAA GAAGGCTTGA TGAACTAAAA GAATGAGGTT 63743 || ||||||| ||||||||| |||||||||| |||||||||| ||||| ||| |||| || CTTTGTTAAT AATGATGCCT TGGTATAAAA GAAGGCTTGA TGAACGAAAG TGGTGAGATT 155 AGTGGATCAG GTGTCACGTT CCGACACCAG GATAGTAGTA GTGAATCGGG TGTCACGTTC 63803 || ||||| | ||| |||||| ||| ||||| ||||| | || || |||||| |||||||||| AGGGGATCGG GTGCCACGTT CCGGTACCAG GATAG-AATA -TGGATCGGG TGTCACGTTC 213 CGACACTAGG ATAGTAATAG TGGATCGGGT --CACGTTCC GACACCAGGA TAGTAATAGT 63861 |||||| ||| |||| |||| |||||||||| |||||||| | ||||||| ||| |||| | CGACACCAGG ATAG-AATA- TGGATCGGGT GCCACGTTCC GGTACCAGGA TAG-AATA-T 269 GGATCGGGTG TCACGTTCTG ACACCAAGAT ACTAGTAATG GATCGGGTGT CACGTTCCGA 63921 |||||||||| |||||||| | |||||| ||| | | | ||| |||||||||| ||||||| || GGATCGGGTG TCACGTTCCG ACACCAGGAT A-GAAT-ATG GATCGGGTGT CACGTTCTGA 327 CACCAGGATA GTAGTAATGG ATCGGGTATC ACGTTCCGAC ACCAGGATAG TAGTAGTGGA 63981 |||||||||| | | | |||| ||||||| | |||||||| ||||||||| || CACCAGGATA G-AAT-ATGG ATCGGGTGCC ACGTTCCGGT GCCAGGATAG TA........ 377 TCGGGTGTCA CGGTAGTAGT GGATCGGGTG TCACGTTCTG ACACCAGGAT AGTAGTAGAG 64041 || | ||| .......... .......... .......... .......... .......... ..TA-TTGAG 384 GATCGGAGTG TCACGTTCCG ACACCAGGAT AGTAAAAAGA ATGAATCTTG AATCATGTTA 64101 || |||||| |||||| | |||| ||| | |||| | |||||||||| || |||||| GAGTGGAGTG TCACGTAAGG ACACGAGGGG AATAAATATG ATGAATCTTG AAATATGTTA 444 ATATACTCAG GTTTAAAGAA ACTATTTCCC AAACGAGTAT GGTGTGGAGG CGTGAGTACT 64161 ||||| || | || ||| | ||||| ||| ||||| | || ||||| |||||| || ATATATGCA- ATCCAATGAA CTAAATTCCC AAATAAGTAT GATGAGGAGG TGTGAGTCCT 503 CATGGATGCG CTTGG-GTTG TGGCCAATGG TTATGGTACT TGTTGTTGTT GTCTGTTGAG 64220 ||| |||| | ||||| | || |||| || |||||||| | || || | | || | || CATTGATGTG CTTGGTGATG CAACCAAGGG TTATGGTAAT TGCAAATGCT GCATGCTAAG 563 TATTGTAGTT GATTTTATGT TATTATCTGA TATATGTTAT TTTCTATTTT GAGTTGGCCG 64280 || ||||| |||||||| |||| | | || || | | |||||||| |||||||||| GATATTAGTT AATTTTATGA TATTGCTTAA TACATACTGG TATCTATTTT GAGTTGGCCG 623 ATGATACCTA CTCAGTACTT GTGCCTTGTA CTGACCCCTA CTTGTA-TGT TTCTTTCTTG 64339 | ||| ||| |||| ||| ||| ||||| |||||||||| ||| || ||| | ||| || | ACGATGTCTA CTCAATACCC GTGTTTTGTA CTGACCCCTA CTTTTATTGT TACTTCCTGG 683 TTATTTTTGG AGTGCAGCAA ACGTGCCATC GACTTCGACT CAACCGCAAC TCTAGCCAGA 64399 ||||| || || ||||||| ||||||| || ||| ||| |||| ||| || || | | GTATTTGGGG AGAGCAGCAA ACGTGCCGTC ACCTTATACT TCACCGTAAC TCAAGGCTGG 743 CTTCAGCATA AT-CAGATTT CAGG 64422 ||| | | | || | | || |||| CTTTACTACA ATGGAAAATT CAGG 767 hqPGS_C08HBa0294K15.1+_SGN-U335078+ (63684 63973,64034 64422) ******************************************************************************** EST sequence 55 +strand 1035 n (File: SGN-U339541+) 1 TAGAACCATC GAGATCCACC TCGGTGGCTT CCGCTCTAGA ACTCGTGGAT CCCCCGGGCT 61 GCAGGTCTTG ATGAGAATTT GTCTTATGAG GAGGAGCCTG TTGCCATTTT AGATAGAGAA 121 GTCCGCAAAT TGAGGTCAAG GGAGATTGCA TCTATCAAAG TTCAATGGAA GAATCGACCA 181 GTTGAAGAAT CCACTTGGGA GAAGGAAGTT GATATGCGAG AAAGATACCC ATACCTGTTT 241 ACAGATTCAG GTACTCCTTT TCGCCCTTGT TTTTCTTCTT GTGATCGTTC GGGGACGAAC 301 GATGGGTAAA TTGGTATCTA TTGTAACGAC CTGTTTAGTC GTTTTGAGTA ACAGATTTTA 361 TTTCTGGAAA AACTGACTGA GACGACGGAT CCCACGACGG ACCGTCGAGG GGGTCTCGTT 421 CCAAAACACT TAGAATTCTG AAATTTGGGT ACTGAAATCG ACTCTCTGAA CTTCGTGACG 481 GAATGGCAGG ACGGACCGTC ACAGGCGTGA TGGGCCGTCA CAGACCCTTG GTAAAAATCT 541 AGTCTCTGAA CTCTGTGACG GACGTGCAGG ACGGACCGTC ACAGACTGCG TAATCCCAGG 601 CTGGGTCGGA TTTCTGTTAA ATGTTTTAAG GGGCGTTTTG GACTATTCTT GCTTATAATT 661 ATAAAAGTTG TGGTTGAATA TAAATAATCC AATTTCTTGA GGGTTAAAGG AGATAACCTT 721 AAATTAATTA GTGGGTTATT TTGGCATCCT TTATACTTAA ATATATGGTA ATTAGGGTAA 781 AAAGAAAGAG GGGTTTGGAT TAAGAAAAAT TGTAAGCACC CAGGAGAAGG GAAAGAAAAA 841 CAATCCGAGA GAAAGAGGGG ATACCCAAGG AGGAAACAAA GCTTTGGGAA AATGGCTTGC 901 TTGAACACCA AATTCTTGGG GGAAGCAAAC GTGCCCGGTT TTTTCACCTA ACCCGCAACT 961 CTTAGCCAGT CTTTTATTTC ACCCCAATTT CAGGGTGGGC TAATGCTTTT TAGCCTGGGA 1021 CTGGATTTTC CTTTC Predicted gene structure (within gDNA segment 61041 to 68331): Exon 1 62651 63432 ( 782 n); cDNA 66 830 ( 765 n); score: 0.845 Intron 1 63433 67529 (4097 n); Pd: 0.000 (s: 0.70), Pa: 0.322 (s: 0) Exon 2 67530 67552 ( 23 n); cDNA 831 853 ( 23 n); score: 0.609 MATCH C08HBa0294K15.1+ SGN-U339541+ 0.845 805 0.778 C PGS_C08HBa0294K15.1+_SGN-U339541+ (62651 63432,67530 67552) Alignment (genomic DNA sequence = upper lines): TCTTGATGAG AATTTATCTT ATGAGGAGGA GTCTGTTGCT ATTTTAGATA GAGAAGTCCG 62710 |||||||||| ||||| |||| |||||||||| | ||||||| |||||||||| |||||||||| TCTTGATGAG AATTTGTCTT ATGAGGAGGA GCCTGTTGCC ATTTTAGATA GAGAAGTCCG 125 CAAGTTGAGG TCAAGGGAGA TTGCATCCAT CAAGGTTCAA TGGAAGAATC GACCAATTGA 62770 ||| |||||| |||||||||| ||||||| || ||| |||||| |||||||||| ||||| |||| CAAATTGAGG TCAAGGGAGA TTGCATCTAT CAAAGTTCAA TGGAAGAATC GACCAGTTGA 185 AAAGTCCACT TGGGAGAAGG AGGCTGATAT GCAAGAAAAA TACCCACACC TGTTTACAGA 62830 | | |||||| |||||||||| | | |||||| || ||||| | |||||| ||| |||||||||| AGAATCCACT TGGGAGAAGG AAGTTGATAT GCGAGAAAGA TACCCATACC TGTTTACAGA 245 TTCAGGTACT CCTTTTCGCC CTTGTTTTTC TTCTTGTGAT CGTTCGGGGA CAAACGATGG 62890 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| TTCAGGTACT CCTTTTCGCC CTTGTTTTTC TTCTTGTGAT CGTTCGGGGA CGAACGATGG 305 GTAAATTGGT ATCTATTGTA ACGACCTG-T TAGTCGTTTT GAGCAGTAGA GTTTATTCTA 62949 |||||||||| |||||||||| |||||||| | |||||||||| ||| | ||| |||||| GTAAATTGGT ATCTATTGTA ACGACCTGTT TAGTCGTTTT GAGTAACAGA TTTTATTTCT 365 GTAATAGTTG TCTGGGTCGA CGGATCCCAC GACGGACCGT CGAAGGGGTC TCGTTCCAAA 63009 | || | || ||| | ||| |||||||||| |||||||||| ||| |||||| |||||||||| GGAAAAACTG ACTGAGACGA CGGATCCCAC GACGGACCGT CGAGGGGGTC TCGTTCCAAA 425 ACACTTAG-A TTCTAAAATT TTGGGTACTG AGAACAACTA TCTGAACTTC GCGACGACAT 63068 |||||||| | |||| ||| | |||||||||| | | | ||| |||||||||| | |||| || ACACTTAGAA TTCTGAAA-T TTGGGTACTG AAATCGACTC TCTGAACTTC GTGACGGAAT 484 GGCAGGACGG ACCGTCGTGG GCACGATGGA CCGTCACAGA CCCTTTAATG AAATTCAGTC 63128 |||||||||| |||||| | || ||||| |||||||||| ||||| |||| |||| GGCAGGACGG ACCGTCACAG GCGTGATGGG CCGTCACAGA CCCTTGGTAA AAATCTAGTC 544 TCTGAACTTT GTGACGGAAG CAGCAGGACG GACCGTCGCA GGCACGACGG GCCGTCACAG 63188 |||||||| | |||||||| | |||||||| |||||| || || ||| | ||| | | TCTGAACTCT GTGACGGACG -TGCAGGACG GACCGT--CA --CA-GAC-T G-CGT-A-A- 593 GCTGCGTAAC CCTGACTGAG TCGGATTTCT GTTAAATGTT TTAAGGGGCG TTTTGGACTA 63248 | | || | ||| | |||||||||| |||||||||| |||||||||| |||||||||| ------T--C CCAGGCTGGG TCGGATTTCT GTTAAATGTT TTAAGGGGCG TTTTGGACTA 645 TTCCTGCTTA TAATTGTAAA GTTAGTGGGT TAATGTTAAT AATTCAATTA CTTGGGGGTT 63308 ||| |||||| ||||| |||| | |||| | ||| | ||| ||| ||||| |||| ||||| TTCTTGCTTA TAATTATAAA AGTTGTGGTT GAATATAAAT AATCCAATTT CTTGAGGGTT 705 AAAGGTGATA ACCTTGAAAT AAATAGTGGG TTACTTTTAC CATCTTTTAT ACTTAATTAT 63368 ||||| |||| ||||| || | || ||||||| ||| |||| |||| ||||| |||||| ||| AAAGGAGATA ACCTTAAATT AATTAGTGGG TTA-TTTTGG CATCCTTTAT ACTTAAATAT 764 ATGGTAATTA GGGT-AAAAG AAA-AAGAGT TTGAATAAGG AAAAATAGAA AGAACAGAAG 63426 |||||||||| |||| ||||| ||| | | || ||| || | | |||||| | | || || | | ATGGTAATTA GGGTAAAAAG AAAGAGGGGT TTGGATTAAG AAAAATTGTA AGCACCCAGG 824 AGAGGGACGA ACGAGCGAGA GAAGATAGAA CGAAGAGGAA AGCAAAGACC TTGAAGAGTA 63486 ||| || AGAAGG.... .......... .......... .......... .......... .......... 830 GCTTGCGTGA TCACGAATTC TTCGATGGAA GTAGGTTATG GTTTATGTTA TTTCATAGTA 63546 .......... .......... .......... .......... .......... .......... 830 AACTCTTAAT AGCGAATGAT ATGTATTGGG TAGTATTGTA AAGTCTTCTA TATGCTTAAT 63606 .......... .......... .......... .......... .......... .......... 830 TGTATGCTTG CATGATGTGA TTATGTAAGT GTAATGAGTT GGAAAGATGA GGTTGTGAAG 63666 .......... .......... .......... .......... .......... .......... 830 CTTAAACCTA AAACCCTCTG TGTTAATGAT GATGCCTTGG TATAAAAGAA GGCTTGATGA 63726 .......... .......... .......... .......... .......... .......... 830 ACTAAAAGAA TGAGGTTAGT GGATCAGGTG TCACGTTCCG ACACCAGGAT AGTAGTAGTG 63786 .......... .......... .......... .......... .......... .......... 830 AATCGGGTGT CACGTTCCGA CACTAGGATA GTAATAGTGG ATCGGGTCAC GTTCCGACAC 63846 .......... .......... .......... .......... .......... .......... 830 CAGGATAGTA ATAGTGGATC GGGTGTCACG TTCTGACACC AAGATACTAG TAATGGATCG 63906 .......... .......... .......... .......... .......... .......... 830 GGTGTCACGT TCCGACACCA GGATAGTAGT AATGGATCGG GTATCACGTT CCGACACCAG 63966 .......... .......... .......... .......... .......... .......... 830 GATAGTAGTA GTGGATCGGG TGTCACGGTA GTAGTGGATC GGGTGTCACG TTCTGACACC 64026 .......... .......... .......... .......... .......... .......... 830 AGGATAGTAG TAGAGGATCG GAGTGTCACG TTCCGACACC AGGATAGTAA AAAGAATGAA 64086 .......... .......... .......... .......... .......... .......... 830 TCTTGAATCA TGTTAATATA CTCAGGTTTA AAGAAACTAT TTCCCAAACG AGTATGGTGT 64146 .......... .......... .......... .......... .......... .......... 830 GGAGGCGTGA GTACTCATGG ATGCGCTTGG GTTGTGGCCA ATGGTTATGG TACTTGTTGT 64206 .......... .......... .......... .......... .......... .......... 830 TGTTGTCTGT TGAGTATTGT AGTTGATTTT ATGTTATTAT CTGATATATG TTATTTTCTA 64266 .......... .......... .......... .......... .......... .......... 830 TTTTGAGTTG GCCGATGATA CCTACTCAGT ACTTGTGCCT TGTACTGACC CCTACTTGTA 64326 .......... .......... .......... .......... .......... .......... 830 TGTTTCTTTC TTGTTATTTT TGGAGTGCAG CAAACGTGCC ATCGACTTCG ACTCAACCGC 64386 .......... .......... .......... .......... .......... .......... 830 AACTCTAGCC AGACTTCAGC ATAATCAGAT TTCAGGGTGA GCTATTGTTC CTAGTTCGGA 64446 .......... .......... .......... .......... .......... .......... 830 CTGGATTCTT TCCTTCGCGT CTTGATGTCT TGAAGTTCGG ACATGGACCA TCTCTTTTAC 64506 .......... .......... .......... .......... .......... .......... 830 TTATTTTAGC TTCTTAGATA CTCTTAGATT TAGTAATTTG AGGATAGATG TTCTTGTGAT 64566 .......... .......... .......... .......... .......... .......... 830 GATGACTTCC AGATTTTGGG GATAATGATA AGTTTTGAGT TTTAGAAGTT AATTGTTGAT 64626 .......... .......... .......... .......... .......... .......... 830 TTCGTTAATG AGTTTTAAGT CTTCCGCATT ATATTCTATT TATTATCGTT GAATTGTTTG 64686 .......... .......... .......... .......... .......... .......... 830 GGTTTAGATT GGTTTGTTCG CTCACATAGG AGGGTAAGTA TGGGTGCCAC TCGCGGCCTG 64746 .......... .......... .......... .......... .......... .......... 830 TTTTGGGTCG TGACAGTAGG AAATCAAACT CTAAGTCGAG GACTTTCTAC ACAAAATGGT 64806 .......... .......... .......... .......... .......... .......... 830 ATAAATATAA TTATTTAATT TAGTATCGGT TAACCCGTTA AGAAAAAACT TCAAACCGTT 64866 .......... .......... .......... .......... .......... .......... 830 AAGAACCGAT AACCCGATAA CAAAAAAATC AAAACCGTTA TTAAAACCAC TAAACTAATA 64926 .......... .......... .......... .......... .......... .......... 830 ACCCAATACT ATAAACCAAT AACTTTTTTA TCGATTCGGC TTATCGGTTT CGATTCGATT 64986 .......... .......... .......... .......... .......... .......... 830 TTGAACTGCC CTATGGACGT GTATCTAAAT TTAATCAATT AAGTAGAAAA ATATTTTTAA 65046 .......... .......... .......... .......... .......... .......... 830 AGGCATCAAT AATTTAAAAC AAAACTAATA ATTTACTTTA AATTTAGAAA TATTCTCAAT 65106 .......... .......... .......... .......... .......... .......... 830 ACTTTCGCTC TTTTATAAAT TTATATAAAT TAGAACAATA AAAAGATCCA GCCTTCAAAT 65166 .......... .......... .......... .......... .......... .......... 830 GGCTGTCAAT ATTCTTTTCA AAATTCAAAT TTATCTATAA ATCTCTCTTA TTTACTTCCC 65226 .......... .......... .......... .......... .......... .......... 830 ACAACGATCA TCAGGTCCAT ATCTATTCAA TATTCACACT TGCGTCAACA TAATGTCCAC 65286 .......... .......... .......... .......... .......... .......... 830 TTCACATTCG TAGAAAATGA TTGGCTATAT ATAATAATTT ATAATTTAAG TTACTTGACA 65346 .......... .......... .......... .......... .......... .......... 830 CCATAGAGCA TGTGGACATT ATTCAATTTC AATTTTGTAC TTGTACTCTT TCCATTGACA 65406 .......... .......... .......... .......... .......... .......... 830 ATGATGATTT TTCACCTTCT TTTTTTTTAG AAATTATATT TAGAAATTAT ATTTGTATGT 65466 .......... .......... .......... .......... .......... .......... 830 TATAGTTATA ATTTACATAA TTATACTTAT GACAAATTTT ATGTTTGTTA TGGAGCTTTT 65526 .......... .......... .......... .......... .......... .......... 830 GATTTGTATA ACTCATCAGA AACATCCAAT TTTATACAAA TTGTTCTATT TTGTATAATT 65586 .......... .......... .......... .......... .......... .......... 830 TCATTATACA TTGTAATTTG TATAATAAGA TTTGCATTTG TATATTAATA AGTGTATAGG 65646 .......... .......... .......... .......... .......... .......... 830 ACGAAAATAT ATGTATTTGT ATTTATATAT GCACTTTTCG CTCGCTTAAT ACAAACACAA 65706 .......... .......... .......... .......... .......... .......... 830 ACACATTTTA CATATCTTAT ATCGAAATGT ATAAAATGAC TAATTGTATA TCGAAAATGA 65766 .......... .......... .......... .......... .......... .......... 830 TAATTATACT GAAATCAGAT GGAAAAAAAT GAAATGTTTG CTGCAAATTA CAATTAAAAT 65826 .......... .......... .......... .......... .......... .......... 830 AGACTATGAC TATAACATTT AATTTGAATT AATCGTTTGC TATTTTATAC AATTTATTTT 65886 .......... .......... .......... .......... .......... .......... 830 TATAATCTAT CTAAATCTAA ATAACATCTG GCAACCCAAA ATCTAGATTA TTGCTTCGCA 65946 .......... .......... .......... .......... .......... .......... 830 TGATGATAAA GATTTTATTT TTTTCAAAAA ATATGTTGGC TTAGTCTCTC ATCCAACTTT 66006 .......... .......... .......... .......... .......... .......... 830 TGCTTCAATA GCTAAGTTGA AGTGTTCAAT GCAGAGAAAT AGACTTGTGG AAAATGATGG 66066 .......... .......... .......... .......... .......... .......... 830 TTAAAAAAAT TTCACTCAAT TAAACACTTG GACACGTTTT GATATAATAG ATAAAAAAAA 66126 .......... .......... .......... .......... .......... .......... 830 AATTCTATAA TAACGCATTA TAGAATTAAT AATAGTTTGT ACCGATATAA GCTATCTCGA 66186 .......... .......... .......... .......... .......... .......... 830 TCTCTAAGTA AAAAAATAAT CCTAAGATAA CTTGCTCCGA AATAAAATAG TTAAAAGGAT 66246 .......... .......... .......... .......... .......... .......... 830 AAAAATATTC CTTCAAACAT CTTTTTTATA CATCACTTTA CATTGATTAC ACTAATGAAA 66306 .......... .......... .......... .......... .......... .......... 830 TGCATTTATA ACCAAACAAT TTATTCATAG AAATTATACA ATGCATTCAT TAAGAAATTA 66366 .......... .......... .......... .......... .......... .......... 830 TATGAATATT ACTAATTCCA TCGTAATTTA TATTCGAATC AAATAGTCTT TAATCCTTTT 66426 .......... .......... .......... .......... .......... .......... 830 AATTTAAGTG GTACAAAAAG CATAGGAGAT ATCGAAACTG ACGGCGCAAG TTAGTCCACA 66486 .......... .......... .......... .......... .......... .......... 830 ATCCATTTTT AAAATATCTA ATAAAAGATT TTAATTTAGA ACCTTTTATA TGTTAAGTCA 66546 .......... .......... .......... .......... .......... .......... 830 GATTTCGGTG CAATATGAAG GATTATAACA TATATATATT TGTTGTGGTC TTTTGTTAAT 66606 .......... .......... .......... .......... .......... .......... 830 TACTCTTTTT CTTCTATGCA ATATCTGTTT GTTTGTTTAT TTTATATCAT CAAACTAAGG 66666 .......... .......... .......... .......... .......... .......... 830 ATTAAATAAT ATCACATATA ATACATGTAT TCGATTCATG GTGTATATTT AGTTTTTTAT 66726 .......... .......... .......... .......... .......... .......... 830 GGTCCCTTTG ATCAACTATT GAAAATAAAC TAATATTTAT AGTATATTCA TAGAAGTTTT 66786 .......... .......... .......... .......... .......... .......... 830 CCATAAGTTT TGACAAAGAT ATTATGAATA CAAATATGGG CCAGTTAAGT TTTTTGGGCC 66846 .......... .......... .......... .......... .......... .......... 830 ATCCTTATGT ATCTAAAGCT GAGCTACTTG TGGATTGGGC CTACATAAAA TGTCTTATAC 66906 .......... .......... .......... .......... .......... .......... 830 TAAAAACAAA GAGAAAAAAA GAGGGACGAT CTATTTTAAT GTCCCGTTTA GAATCGATTT 66966 .......... .......... .......... .......... .......... .......... 830 GGAATGATTT TTGATTTTTG AACTTATAAG CCTAAATTCA TAGATTGAAA TTCTAACTTT 67026 .......... .......... .......... .......... .......... .......... 830 TCTTATAGTT TTATCTTAAA AGAACTTTCT AAATCTCAAT AAATATTATT GTCACTAATC 67086 .......... .......... .......... .......... .......... .......... 830 GAATAATTAG GCATTAAGTT GTCAAGTATG CATAAACCTC TCGCAATTTA AAACCAAAGT 67146 .......... .......... .......... .......... .......... .......... 830 ATGAAAGCAA AGATCAATTA TAACAAAGAT TCTATGATTT ATAATAATAA AATACTAAGC 67206 .......... .......... .......... .......... .......... .......... 830 TAATAAGATG CATAAAATTC ACCTTAATGT ATAATATTCT CATATGCTAA GGAAATAAAA 67266 .......... .......... .......... .......... .......... .......... 830 CTTTATAAAA AGAAAGCCAA AACTATTACT TTTAGAACAA AATAAGTTAA ACTTATCCAT 67326 .......... .......... .......... .......... .......... .......... 830 CACTAAGCTA GGTAGTGAAG CCACAAAACA CCCTTTTTGC TTCTTGCTAT TTTCAAGATT 67386 .......... .......... .......... .......... .......... .......... 830 CATGTGATTC TATCACAAAC TAAAGCAATT AAAGTTGATT TTCCCCCTTC ATATGGTATA 67446 .......... .......... .......... .......... .......... .......... 830 TCCAACTCTA CCCAAAAAAG GCACAAGATT TTGCTTTTTG TTCATTACTT GTGAACTTCA 67506 .......... .......... .......... .......... .......... .......... 830 TTGTTGTTAT GTATTTGTAT TAGGTAAAAA GAACATACAA AGTTAA 67552 | || || |||| | || || .......... .......... ...GAAAGAA AAACAATCCG AGAGAA 853 hqPGS_C08HBa0294K15.1+_SGN-U339541+ (62651 63432) ******************************************************************************** EST sequence 65 -strand 920 n (File: SGN-U335071-) 1 AAGGCTAGAT AATTATATAA TGAGAAGATG ATGCCTTGTG TAAAAGAAGC CTGATGGATT 61 GGGGATCGGG TGCCACGTTC CGGTACCAGG ATAGAATGAT TATGAGGATC GGAGTGTCAC 121 GTTCCGACCC CAGGATAGAT ATGGGATCGG GTGCCACGTT CCGGTACCAG GATAGAATAT 181 GAGGATCGGA GTGTCACGTT CCGACACCAG GATAGAAAAT GGATCGGGTG CCACGTTCCG 241 GTACCAGGAT AGAATGAGGA TCGGAGTGCC ACGTTCCGGC ACCAGGATAG AAATAGAGGA 301 TCGGAGTGTC ACGTACCGAC ACAAGAGGAA GAAAGATAAT GAATCTTGAA AGATAATGAA 361 TATACTCAAT CTAATGAACT TAATTCCCAA ATGAGTATGG TATTGAGGCT TGAGTCCTCA 421 TGTGTGAACT CGGTTGTAGT TATTGATGAA TTCATGGTGT TATTGCTACA TGTTGAGTAT 481 TGTAGTTGAT TTACATTATT ATTGATATAT ACTGTTCCCT ATTTTGAGTT GGCCGATGAT 541 ATCTACTCAG TACGTGTGGT TGTACTGACC CCTACTTTCA TGTTTTCCTC TTTGTTATTT 601 GTGTAATGCA GCAAACGTTC CGTCAACTTC AACTCAACAG TAGATCTAGC CAGTCTTCAC 661 TTCATCGGAA AATTCAGGGT GAGCTAATGC GTCTAGCTTG GACTGGGTCT TCTTCTTCAA 721 GTCTTGATGC CTTGAATTTC CGGCATGGAC TAGCTTTTTA GTTATTTTGT TCTTAGACAT 781 TCCTAGTTAA GTAATTTGAG ATAGATGTTC TTGTGATGAT GACTTCCAGA TTTTGGGGAT 841 AATAATAATA GTATTGAATT GTTTTTATTA AAAAAAAAAA AAAAAAAAAA AAAAACTCGA 901 GGGGGGGCCC GGTCCCAATG Predicted gene structure (within gDNA segment 61593 to 65962): Exon 1 63747 63966 ( 220 n); cDNA 63 285 ( 223 n); score: 0.736 Intron 1 63967 64028 ( 62 n); Pd: 0.000 (s: 0.77), Pa: 0.000 (s: 0.80) Exon 2 64029 64597 ( 569 n); cDNA 286 848 ( 563 n); score: 0.776 PPA cDNA 870 896 MATCH C08HBa0294K15.1+ SGN-U335071- 0.765 789 0.858 C PGS_C08HBa0294K15.1+_SGN-U335071- (63747 63966,64029 64597) Alignment (genomic DNA sequence = upper lines): GGATCAGGTG TCACGTTCCG ACACCAGGAT AG--T-AGTA -GTGAATCGG -GTGTCACGT 63801 ||||| |||| ||||||||| |||||||| || | | || | | ||||| ||||||||| GGATCGGGTG CCACGTTCCG GTACCAGGAT AGAATGATTA TGAGGATCGG AGTGTCACGT 122 TCCGACACTA GGATAGTAAT AGTGGATCGG GT--CACGTT CCGACACCAG GATAGTAATA 63859 |||||| | | |||||| || | ||||||| || |||||| ||| ||||| ||||| |||| TCCGACCCCA GGATAG--AT ATGGGATCGG GTGCCACGTT CCGGTACCAG GATAG-AATA 179 -GTGGATCGG -GTGTCACGT TCTGACACCA AGATACTAGT AATGGATCGG GTGTCACGTT 63917 | ||||||| ||||||||| || ||||||| |||| | |||||||||| ||| |||||| TGAGGATCGG AGTGTCACGT TCCGACACCA GGATA-GA-A AATGGATCGG GTGCCACGTT 237 CCGACACCAG GATAGTAGTA ATGGATCGG- GTATCACGTT CCGACACCAG GATAGTAGTA 63976 ||| ||||| ||||| | | | ||||||| || |||||| ||| |||||| CCGGTACCAG GATAG-AATG A-GGATCGGA GTGCCACGTT CCGGCACCAG .......... 285 GTGGATCGGG TGTCACGGTA GTAGTGGATC GGGTGTCACG TTCTGACACC AGGATAGTAG 64036 ||||| | .......... .......... .......... .......... .......... ..GATAGAAA 293 TAGAGGATCG GAGTGTCACG TTCCGACACC AGGATAGTAA AAAGAATGAA TCTTGAATCA 64096 |||||||||| |||||||||| | ||||||| || | || | | |||||| ||||||| | TAGAGGATCG GAGTGTCACG TACCGACACA AGAGGAAGAA AGATAATGAA TCTTGAAAGA 353 T-GTTAATAT ACTCAGGTTT AAAGAAACTA TTTCCCAAAC GAGTATGGTG TGGAGGCGTG 64155 | | ||||| ||||| | | || ||| || |||||||| ||||||||| | ||||| || TAATGAATAT ACTCA-ATCT AATGAACTTA ATTCCCAAAT GAGTATGGTA TTGAGGCTTG 412 AGTACTCATG GATGCGCTTG GGTTGTGGCC AATGGT-TAT GGTACTTGTT GTTGTTGTCT 64214 ||| |||||| || | | |||||| | | || | || |||| ||| | | AGTCCTCATG TGTGAAC-TC GGTTGTAGTT ATTGATGAAT TCATGGTGTT ATTGCTACAT 471 GTTGAGTATT GTAGTTGATT TTATGTTATT ATCTGATATA TGTTATTTTC TATTTTGAGT 64274 |||||||||| |||||||| | ||| ||||| || ||||||| | | || | |||||||||| GTTGAGTATT GTAGTTGA-T TTACATTATT AT-TGATATA TACTGTTCCC TATTTTGAGT 529 TGGCCGATGA TACCTACTCA GTACTTGTGC CTTGTACTGA CCCCTACTTG TATG-TTTCT 64333 |||||||||| || ||||||| |||| |||| ||||||||| ||||||||| ||| |||| TGGCCGATGA TATCTACTCA GTACGTGTG- GTTGTACTGA CCCCTACTTT CATGTTTTCC 588 TTCTTGTTAT TTTTGGAGTG CAGCAAACGT GCCATCGACT TCGACTCAAC CGCAACTCTA 64393 | ||||||| || || | || |||||||||| || || ||| || ||||||| | | |||| TCTTTGTTAT TTGTGTAATG CAGCAAACGT TCCGTCAACT TCAACTCAAC AGTAGATCTA 648 GCCAGACTTC AGCATAATCA GA--TTTCAG GGTGAGCTAT TGTTCCTAGT TCGGACTGGA 64451 ||||| |||| | | | ||| || ||||| ||||||||| || |||| | ||||||| GCCAGTCTTC A-CTTCATCG GAAAATTCAG GGTGAGCTAA TGCGTCTAGC TTGGACTGGG 707 TTCTTTCCTT CGCGTCTTGA TGTCTTGAAG TTCGGACATG GACCATCTCT TTTACTTATT 64511 | | | ||| | ||||||| || |||||| ||| | |||| ||| | || | |||| ||||| TCTTCTTCTT CAAGTCTTGA TGCCTTGAAT TTCCGGCATG GACTAGCT-T TTTAGTTATT 766 TTAGCTTCTT AGATACTCTT AGATTTAGTA ATTTGAGGAT AGATGTTCTT GTGATGATGA 64571 || | ||||| ||| | || | || || |||| |||||| ||| |||||||||| |||||||||| TT-G-TTCTT AGACATTCCT AG-TTAAGTA ATTTGA-GAT AGATGTTCTT GTGATGATGA 822 CTTCCAGATT TTGGGGATAA TGATAA 64597 |||||||||| |||||||||| | |||| CTTCCAGATT TTGGGGATAA TAATAA 848 hqPGS_C08HBa0294K15.1+_SGN-U335071- (63747 63966,64029 64597) ******************************************************************************** EST sequence 7 +strand 830 n (File: SGN-U343842+) 1 TTGGAACAAA AGCTCCTGCT CCACCGCGGT GGCGGCCGCT CTAGAACTAG TGGATCCCCC 61 GGGCTGCAGG AATTCGGCAC GAGCTGAGTC GACGGATCCC ACGACGGACC GTCATGAGCA 121 CGACGGACCG TGGAGGGTGT CTCGTTCCAA AACACTTAGA ATTCTGAAAT TTGGGTACTG 181 AGATCGACTC TCTGAACTTC GCGACGAAAT GGCACGACGG ACCGTCACAG GCATGACGGG 241 CTGTCACAAA CCCTTAGTGA AATTTAATCT CTGAACTTTG TGACGGAAGC AGCAGGACGG 301 ACCGTCGCAG GCACGACTGG TCGTCACAGA CTGCGTAACC CTGACTGGGT CGGATTTTTG 361 TTAAATGTTT TAAGGGGCGT TTTGGACTAT TCCTGCTTAT AATTATGAAA TTAGTGGTTT 421 AATGTTAATA ATTCAATTAC TTGGGGGGTT GAAGGAGATA ACCTTGAATT AATTAGCGGG 481 TTACTTTAGG TATCTTTCAT TCTTAATGAT ATGCTAATCA GGGTTAAAGA AAAAGGGTTT 541 GATTAAGACC AATACAACGA TCACAGGGAG GGAGGAACCA ACGATCCAAA AGACAGAACT 601 AAGACGAAAG CAGAACTTTA GAAAGTTAAC TTTTTGGATC ACAAATATCT TCCTTGGAGT 661 GGGTTATGGG TACTCCTTTT TCATGGGCAA CTCTTAATGG CCAATAAAAT GGTTTTGGAA 721 GGAATGGTAA ACCCTCCTTT ATCCTTAATT GGTGGTTCTG CCTAAGGGGA TTAATTATTG 781 GGGTTAAATA GGCCATAAGG GGCCTTATGA AACTAAATTT TTTAAACTTG Predicted gene structure (within gDNA segment 59857 to 67746): Exon 1 62977 63607 ( 631 n); cDNA 119 750 ( 632 n); score: 0.806 MATCH C08HBa0294K15.1+ SGN-U343842+ 0.806 631 0.760 C PGS_C08HBa0294K15.1+_SGN-U343842+ (62977 63607) Alignment (genomic DNA sequence = upper lines): CACGACGGAC CGTCGAAGGG GTCTCGTTCC AAAACACTTA G-ATTCTAAA ATTTTGGGTA 63035 |||||||||| ||| || || |||||||||| |||||||||| | ||||| || | |||||||| CACGACGGAC CGTGGAGGGT GTCTCGTTCC AAAACACTTA GAATTCTGAA A-TTTGGGTA 177 CTGAGAACAA CTATCTGAAC TTCGCGACGA CATGGCAGGA CGGACCGTCG TGGGCACGAT 63095 |||||| | | || ||||||| |||||||||| |||||| || ||||||||| |||| || CTGAGATCGA CTCTCTGAAC TTCGCGACGA AATGGCACGA CGGACCGTCA CAGGCATGAC 237 GGACCGTCAC AGACCCTTTA ATGAAATTCA GTCTCTGAAC TTTGTGACGG AAGCAGCAGG 63155 || | ||||| | |||| ||| ||||||| | ||||||||| |||||||||| |||||||||| GGGCTGTCAC AAACCC-TTA GTGAAATTTA ATCTCTGAAC TTTGTGACGG AAGCAGCAGG 296 ACGGACCGTC GCAGGCACGA CGGGCCGTCA CAGGCTGCGT AACCCTGACT GAGTCGGATT 63215 |||||||||| |||||||||| | || ||||| ||| |||||| |||||||||| | |||||||| ACGGACCGTC GCAGGCACGA CTGGTCGTCA CAGACTGCGT AACCCTGACT GGGTCGGATT 356 TCTGTTAAAT GTTTTAAGGG GCGTTTTGGA CTATTCCTGC TTATAATTGT AAAGTTAGTG 63275 | |||||||| |||||||||| |||||||||| |||||||||| |||||||| | || |||||| TTTGTTAAAT GTTTTAAGGG GCGTTTTGGA CTATTCCTGC TTATAATTAT GAAATTAGTG 416 GGTTAATGTT AATAATTCAA TTACTT-GGG GGTTAAAGGT GATAACCTTG AAATAAATAG 63334 | |||||||| |||||||||| |||||| ||| |||| |||| |||||||||| || ||| ||| GTTTAATGTT AATAATTCAA TTACTTGGGG GGTTGAAGGA GATAACCTTG AATTAATTAG 476 TGGGTTACTT TTACCATCTT TTATACTTAA TTATATGGTA ATTAGGGTAA AAGAAAAAGA 63394 ||||||||| | ||||| | || ||||| | ||||| || || ||||| | ||||||||| CGGGTTACTT TAGGTATCTT TCATTCTTAA TGATATGCTA ATCAGGGTTA AAGAAAAAGG 536 GTTTGAATAA GGAAAAATAG AAAGAACAGA AGAGAGGGAC GAACGAGCGA --GAGAAGAT 63452 |||||| ||| || |||| || || || || |||||| |||| | ||| | |||| GTTTGATTAA -GACCAATAC AACGATCA-C AGGGAGGGAG GAACCAACGA TCCAAAAGAC 594 AGAACGAAGA GGAAAGCAAA GACCTT-GAA GAGTAGCTTG CGTGATCACG AAT-TCTTCG 63510 ||||| |||| ||||||| | || || ||| || ||| |||||| ||| ||||| AGAACTAAGA CGAAAGCAGA -ACTTTAGAA AGTTAACTTT TTGGATCACA AATATCTTCC 653 ATGGAAGTAG GTTATGGTTT ATGTTATTTC ATAGTAAACT CTTAATAGCG AATGATAT-G 63569 ||| ||| | ||||||| | | | |||| || | |||| |||||| || ||| | || | TTGG-AGTGG GTTATGGGTA CTCCTTTTTC ATGGGCAACT CTTAATGGCC AATAAAATGG 712 TATTGGGTAG TATTGTAAAG TCTTCTATAT GCTTAATT 63607 | |||| | || ||||| || || ||| ||||||| TTTTGGAAGG AATGGTAAAC CCTCCTTTAT CCTTAATT 750 hqPGS_C08HBa0294K15.1+_SGN-U343842+ (62977 63607) ******************************************************************************** EST sequence 32 +strand 1660 n (File: SGN-U315285+) 1 TAGTCTTCGG TGGAGGTAGG TTATTGTTTC TCTTACGATA TTCGTAGTAA ACTCTTAATA 61 GAGAATGATA TGTATTGATA ATATTGTAAA CCCTGCTATG TGCTTAATTG TATGCTTGCA 121 TGAATGTAAC TATATAATTG TTATTATATA AGCATGATGA AGTTATTGAA TCCCAAATCT 181 TGTAAAAACC TAATCTCTTT TTAATGATGA TGCCTTGGTA AGGGAGAAGG CTTGATGAAC 241 TAAAGTAATG AGATTGATGA TGCCTTGGTA AGGGAGAAGG CTTGATGAAT TGATAGAATG 301 AGATTAGGGG ATCGGGTGTC ACGAACTGAC ACGTAGAATT AGGGGATCGG GTGTCACAAA 361 CCGACACGTA GATTAAGGGA TCAGGTGTCA CGAACCAACA CATAGATTAG GGGATCGGGT 421 GTCACGAACC GACACGTAGA TTTAGGGGAT CGGGTGTCAC GAACCGACAC GTAGATTTAG 481 GGGATCGGGT GTCACGAACC GACACGTAGA TTTAGGGGAT CAGGTGTCAC GAACCGACAC 541 GTAGATTTAG GGGATCGGAG TGTCACGTTC CGACATATAG ATTTAGGGGA TCGGAGTGTC 601 ACGTACCGAC ACAAGAGGAT TAATGAATAT TGAGGGAGCG GAGTGTCACG TACCGACACA 661 AGAGAAATAA AGATAATGAA TCTTGAAAGA TGTTAATATA CTCAATCTAA TGAACATGAT 721 TCCCAAATGA GTATGGTATT GAGGCTTGAG TCCTCATGTG TGAACTTGAC GGTAATTGTT 781 AATGATATAG TATTTGTTGT TGCTACATGT TGAGTATCAT AGTTGATTTT ATGATATTAC 841 TTGGTATATA TATTGATTTC TATTTTGAGT TGGCCGATGA TATCTACTCA GTACCCGTGT 901 TTTGTACTGA CCCCTACTTT TATGTTCTCT TCTTGTTTAT TTGTGGAGTG CAGCAAACGT 961 GCCATCGTCC TCAACTCAAC AGTAATTCAA GCCAGTCTTA CTACATCGGA AATTCAGGGT 1021 GAGCTAATGC TTCTAGCTTG GACTGGATCT TCTTCTTCAA GTCTCGATGC CTTGAACTTC 1081 CGGCATGGAC TAGCTTCTTA TGTATTTTTA GCTTTTAGAA TACTCATAGT TTAGTCATTT 1141 GATCGTAGAT GTTCTTGTGA TGATGACTTC CAGATTTTGG GGAATAATAG ATGTTGAATT 1201 TTAGAAGTTA ATGAATTGGT CTGTATTTAA TGAGTTTAAG TCTTCCACAT TACTTTCTGT 1261 TGATATTATA TTGAAATGTT AAGGTTAGAT TGGTTGGTTC GCTCACATAG GAGGGTAAGT 1321 GTGGGTGCCA GTCGCAACCC GGTTTTGGTC GTGACAAACT TGGTATCAGA GCATTAGGTT 1381 CGTTGGTCTC ATCACACAAG AACGAGTCTA GTAGAGTCTT AAGGAACGGT AGGGGGATGC 1441 CTTTACTTTT CCTTGAGAGG CTATAAGACT TTTGGAAAAT TCCATTCTTT CTTCTTTCGT 1501 GCTATTACTT GGGTCCAATT GGTATCTAGG TGATACAAAT TGGTATCTGA CCATCTTCAC 1561 TCTATTTCGC AGATGGTTAG AACTAGAGCA ACGACTACGC CAGCATCAAC ACCAGCACCG 1621 GCGGGACAGG GTGCGACTGA GCCAGCCACT GGGGCTGTGG Predicted gene structure (within gDNA segment 61089 to 69968): Exon 1 63716 63976 ( 261 n); cDNA 383 625 ( 243 n); score: 0.678 Intron 1 63977 64028 ( 52 n); Pd: 0.000 (s: 0.64), Pa: 0.000 (s: 0.74) Exon 2 64029 64761 ( 733 n); cDNA 626 1356 ( 731 n); score: 0.766 MATCH C08HBa0294K15.1+ SGN-U315285+ 0.743 994 0.599 C PGS_C08HBa0294K15.1+_SGN-U315285+ (63716 63976,64029 64761) Alignment (genomic DNA sequence = upper lines): AGGCTTGATG AACTAAAAGA ATGAGGTTAG TGGATCAGGT GTCACGTTCC GACACCAGGA 63775 ||| | | | ||| || | || || |||| ||||| ||| |||||| || |||| | | AGGTGTCACG AACCAACA-C AT-AGATTAG GGGATCGGGT GTCACGAACC GACA-C--G- 436 TAGTAGTAGT GAATCGGGTG TCACGTTCCG ACACTAGGAT AGTAATAGTG GATC-GG-GT 63833 ||| ||| | |||||||| ||||| ||| |||| | | || ||| | |||| || || TAGATTTAGG GGATCGGGTG TCACGAACCG ACAC---G-T AGATTTAGGG GATCGGGTGT 492 CACGTTCCGA CACCAGGATA GTAATAGTGG ATCGGGTGTC ACGTTCTGAC ACCAAGATAC 63893 |||| |||| || | | || | ||| || ||| |||||| ||| | ||| || |||| CACGAACCGA CA-C--G-TA GATTTAGGGG ATCAGGTGTC ACGAACCGAC ACGTAGAT-T 547 TAGTAATGGA TCGG-GTGTC ACGTTCCGAC ACCAGGATAG TAGTAATGGA TCGG-GTATC 63951 ||| ||| |||| ||||| |||||||| | || |||| || ||| |||| || || TAG---GGGA TCGGAGTGTC ACGTTCCG-- A-CA-TATAG ATTTAGGGGA TCGGAGTGTC 600 ACGTTCCGAC ACCAGGATAG TAGTAGTGGA TCGGGTGTCA CGGTAGTAGT GGATCGGGTG 64011 |||| ||||| || || | || | ACGTACCGAC ACAAGAGGAT TAATG..... .......... .......... .......... 625 TCACGTTCTG ACACCAGGAT AGTAGTAGAG GATCGGAGTG TCACGTTCCG ACACCAGGAT 64071 || | | | || | || ||||||| |||||| ||| |||| || .......... .......AAT A-TTG-AG-G GAGCGGAGTG TCACGTACCG ACACAAGAGA 665 AGTAAAAAGA ATGAATCTTG AATCATGTTA ATATACTCAG GTTTAAAGAA ACTATTTCCC 64131 | |||| | | |||||||||| || |||||| ||||||||| | ||| ||| | ||||| AATAAAGATA ATGAATCTTG AAAGATGTTA ATATACTCA- ATCTAATGAA CATGATTCCC 724 AAACGAGTAT GGTGTGGAGG CGTGAGTACT CATGGATGCG CTTG--GGTT GTGGCCAATG 64189 ||| |||||| ||| | |||| | ||||| || |||| || |||| ||| | | ||| AAATGAGTAT GGTATTGAGG CTTGAGTCCT CATGTGTGAA CTTGACGGTA ATTGTTAAT- 783 GTTATGGTAC TTGTTGTTGT TGTCTGTTGA GTATTGTAGT TGATTTTATG TTATTA-TCT 64248 | ||| ||| ||||||||| | |||||| |||| |||| |||||||||| ||||| | GATATAGTAT TTGTTGTTGC TACATGTTGA GTATCATAGT TGATTTTATG ATATTACTTG 843 G-ATATATGT TATTTTCTAT TTTGAGTTGG CCGATGATAC CTACTCAGTA CTTGTGCCTT 64307 | |||||| | | ||||||| |||||||||| ||||||||| |||||||||| | ||| || GTATATATAT TGATTTCTAT TTTGAGTTGG CCGATGATAT CTACTCAGTA CCCGTGTTTT 903 GTACTGACCC CTACTTGTAT GTTTCTTTCT TG-TTATTTT TGGAGTGCAG CAAACGTGCC 64366 |||||||||| |||||| ||| ||| |||| || |||||| |||||||||| |||||||||| GTACTGACCC CTACTTTTAT GTTCTCTTCT TGTTTATTTG TGGAGTGCAG CAAACGTGCC 963 ATCGACTTCG ACTCAACCGC AACTCTAGCC AGACTTCAGC ATAATCAG-A TTTCAGGGTG 64425 |||| | || ||||||| | || || |||| || ||| | | ||| | | ||||||||| ATCGTCCTCA ACTCAACAGT AATTCAAGCC AGTCTT-A-C TACATCGGAA ATTCAGGGTG 1021 AGCTATTGTT CCTAGTTCGG ACTGGATTCT TTCCTTCGCG TCTTGATGTC TTGAAGTTCG 64485 ||||| || | |||| | || ||||||| | | |||| | ||| |||| | ||||| ||| AGCTAATGCT TCTAGCTTGG ACTGGATCTT CTTCTTCAAG TCTCGATGCC TTGAACTTCC 1081 GACATGGACC ATCTCTTTTA CTTA-TTTTA GCTTCTTAG- ATACTCTTAG ATTTAGTAAT 64543 | ||||||| | || | ||| || ||||| |||| |||| |||||| ||| |||||| || GGCATGGACT AGCT-TCTTA TGTATTTTTA GCTT-TTAGA ATACTCATAG -TTTAGTCAT 1138 TTGAGGATAG ATGTTCTTGT GATGATGACT TCCAGATTTT GGGGATAATG ATAAGTTTTG 64603 |||| ||| |||||||||| |||||||||| |||||||||| |||| ||| ||| | ||| TTGATCGTAG ATGTTCTTGT GATGATGACT TCCAGATTTT GGGG--AATA ATAGATGTTG 1196 AGTTTTAGAA GTTAAT-TGT TGAT-T-TCG TTAATGAGTT TTAAGTCTTC CGCATTATAT 64660 | |||||||| |||||| | || | | | |||||||| | |||||||||| | ||||| | AATTTTAGAA GTTAATGAAT TGGTCTGTAT TTAATGAG-T TTAAGTCTTC CACATTACTT 1255 TCTATT--TA TTATCGTTGA ATTGTTTGGG TTTAGATTGG TTTGTTCGCT CACATAGGAG 64718 ||| || || |||| |||| | |||| || ||||||||| || ||||||| |||||||||| TCTGTTGATA TTAT-ATTGA AATGTTAAGG -TTAGATTGG TTGGTTCGCT CACATAGGAG 1313 GGTAAGTATG GGTGCCACTC GCGGCCTGTT TTGGGTCGTG ACA 64761 ||||||| || ||||||| || || || | | || ||||||| ||| GGTAAGTGTG GGTGCCAGTC GCAACCCGGT TTTGGTCGTG ACA 1356 hqPGS_C08HBa0294K15.1+_SGN-U315285+ (64029 64761) ******************************************************************************** EST sequence 14 +strand 1490 n (File: SGN-U335075+) 1 NGCCATGGGG NNGGGCAGAG ATGTATGACT CCTATGGGCG AATGGCGGCA AATCGGCCGA 61 ATTGATCGTC CCTCTCTCTC TGTCATCGTC CCTCTCTCTC TCATCATTCC TCTCTACCAG 121 CATTCTCCAT CTCCTCTCTC CGCCGTCATC TTCTTCATCT TCATCTCCGC CGTCGTCTTC 181 TCCATTCTCC ATCTCCTCCG TCGTCTTCTC CATTCTCCAT CTCCTCTCTT CGCCGCCAGC 241 TCCATCTCTG CGCGCCATTT GCAGTCGGGC CTCAGCAGGT GGAGGTCGCG CCGCCTCCAT 301 CTCCGCCGAG TCGTGCAGCA GCAACAGTGG TCGACGTTCC CAACCCTTTG ACTCCAGCAA 361 ACGTGCCGTC ATCTTCAACT CAACCGCAAC TCTAGCCAGT CTTCATTACA CCAGATTTCA 421 GGGTGAGCTA ATGCTTCTAG CTTGGACTGG ATCTTCCTCT TCATGTCTTG ATGCCTTGAA 481 CTTCCGGCAT GGACTAGCTT TTTACTTATT CTAGATTCTT AGATACTCTT AGCTTATTTG 541 AGGATAGATG TTCTTGTGAT GATGACTTCC AGATTTTGGG AATAATGATA AGTTTGAGTT 601 TTAGAAGTTG ATTAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAACGNNCAA 661 AGGGGGCCCC TGGGAAAATT TGAAGGACCC CCAAAAAAAG CGGGGAAAAG GGGGGAAAAA 721 GGGGGCCCAA GGGGAAAATG GGGACACAAA AAAAAACCAA AAAANNNNNN NNNNNCNACA 781 AANNNTCCGG GGGGAAAANN ATTTCAACAA AAAAAANNNN NGNCCCCNAA TACCCCCAAA 841 AAAATAATAG CNCNANACAT CGTAANTTGA TTAAAGAAGG ACAATAATAC TCTATTACAT 901 TTAAATACAA CCTGAATAAG CACCACATAA AGAATATTAC AACCAATATT GTCATTCACC 961 ACCCTAATAA AGTATAAAGA AAACCGTAAA ATAAACATGA CAATTCAAAA GACGATCAAA 1021 AGTGCAAAAC CCAGAAATAT AGAGCGGAAA TCAATCGATT ATCTAGACAT ATACCTAACA 1081 CATAATGACA TGCCATTACA ACCTTTCTAC TATTAAAGTA ATACATACAC TACCAACGTC 1141 ATCCTAAAAG ATATAATTAA GATATTTAGA ACATATATTA GCGCAGCATA TATTATAATA 1201 AAAAGTACAA CGATAGCGAG TAAAAAGATA AAAATCTAAT CATTTACCAT CGGCAGCAGA 1261 CACGCCAATA AATAGATGAC ATACATATTT TATTAGGATA AAACTGTCCG TACTATAACG 1321 TACGAATATA CACATTAAAT TAAGTCACCT GAGGAACACT GTCAAACTAC GTGATATACC 1381 GATCCGAATC TCTAATATAT ACCATATGAA ACACATATAC ACGTAGTAAN ATAATATATA 1441 CTACTCAATA ATTAGCAACG AACACCCGAC TACTCTATTA TATATAATAA Predicted gene structure (within gDNA segment 60007 to 72577): Exon 1 64354 64620 ( 267 n); cDNA 355 613 ( 259 n); score: 0.852 Intron 1 64621 64887 ( 267 n); Pd: 0.000 (s: 0.94), Pa: 0.000 (s: 0) Exon 2 64888 64902 ( 15 n); cDNA 614 628 ( 15 n); score: 0.733 Intron 2 64903 70921 (6019 n); Pd: 0.732 (s: 0), Pa: 0.000 (s: 0) Exon 3 70922 70939 ( 18 n); cDNA 629 646 ( 18 n); score: 1.000 MATCH C08HBa0294K15.1+ SGN-U335075+ 0.852 300 0.201 C PGS_C08HBa0294K15.1+_SGN-U335075+ (64354 64620,64888 64902,70922 70939) Alignment (genomic DNA sequence = upper lines): CAGCAAACGT GCCATCGACT TCGACTCAAC CGCAACTCTA GCCAGACTTC AGCATAATCA 64413 |||||||||| ||| || || || ||||||| |||||||||| ||||| |||| | | | || CAGCAAACGT GCCGTCATCT TCAACTCAAC CGCAACTCTA GCCAGTCTTC ATTA-CACCA 413 GATTTCAGGG TGAGCTATTG TTCCTAGTTC GGACTGGATT CTTTC-CTTC GCGTCTTGAT 64472 |||||||||| ||||||| || | |||| | |||||||| | ||| | |||| |||||||| GATTTCAGGG TGAGCTAATG CTTCTAGCTT GGACTGGA-T CTTCCTCTTC ATGTCTTGAT 472 GTCTTGAAGT TCGGACATGG ACCATCTCTT TTACTTATTT TAGCTTCTTA GATACTCTTA 64532 | |||||| | || | ||||| || | || || ||||||||| ||| |||||| |||||||||| GCCTTGAACT TCCGGCATGG ACTAGCT-TT TTACTTATTC TAGATTCTTA GATACTCTTA 531 GATTTAGTAA TTTGAGGATA GATGTTCTTG TGATGATGAC TTCCAGATTT TGGGGATAAT 64592 | | | | |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| G--CT--T-A TTTGAGGATA GATGTTCTTG TGATGATGAC TTCCAGATTT TGGGAATAAT 586 GATAAGTTTT GAGTTTTAGA AGTTAATTGT TGATTTCGTT AATGAGTTTT AAGTCTTCCG 64652 |||||| ||| |||||||||| |||| ||| GATAAG-TTT GAGTTTTAGA AGTTGATT.. .......... .......... .......... 613 CATTATATTC TATTTATTAT CGTTGAATTG TTTGGGTTTA GATTGGTTTG TTCGCTCACA 64712 .......... .......... .......... .......... .......... .......... 613 TAGGAGGGTA AGTATGGGTG CCACTCGCGG CCTGTTTTGG GTCGTGACAG TAGGAAATCA 64772 .......... .......... .......... .......... .......... .......... 613 AACTCTAAGT CGAGGACTTT CTACACAAAA TGGTATAAAT ATAATTATTT AATTTAGTAT 64832 .......... .......... .......... .......... .......... .......... 613 CGGTTAACCC GTTAAGAAAA AACTTCAAAC CGTTAAGAAC CGATAACCCG ATAACAAAAA 64892 ||||| .......... .......... .......... .......... .......... .....AAAAA 618 AATCAAAACC GTTATTAAAA CCACTAAACT AATAACCCAA TACTATAAAC CAATAACTTT 64952 || |||| AAAAAAAAAA .......... .......... .......... .......... .......... 628 TTTATCGATT CGGCTTATCG GTTTCGATTC GATTTTGAAC TGCCCTATGG ACGTGTATCT 65012 .......... .......... .......... .......... .......... .......... 628 AAATTTAATC AATTAAGTAG AAAAATATTT TTAAAGGCAT CAATAATTTA AAACAAAACT 65072 .......... .......... .......... .......... .......... .......... 628 AATAATTTAC TTTAAATTTA GAAATATTCT CAATACTTTC GCTCTTTTAT AAATTTATAT 65132 .......... .......... .......... .......... .......... .......... 628 AAATTAGAAC AATAAAAAGA TCCAGCCTTC AAATGGCTGT CAATATTCTT TTCAAAATTC 65192 .......... .......... .......... .......... .......... .......... 628 AAATTTATCT ATAAATCTCT CTTATTTACT TCCCACAACG ATCATCAGGT CCATATCTAT 65252 .......... .......... .......... .......... .......... .......... 628 TCAATATTCA CACTTGCGTC AACATAATGT CCACTTCACA TTCGTAGAAA ATGATTGGCT 65312 .......... .......... .......... .......... .......... .......... 628 ATATATAATA ATTTATAATT TAAGTTACTT GACACCATAG AGCATGTGGA CATTATTCAA 65372 .......... .......... .......... .......... .......... .......... 628 TTTCAATTTT GTACTTGTAC TCTTTCCATT GACAATGATG ATTTTTCACC TTCTTTTTTT 65432 .......... .......... .......... .......... .......... .......... 628 TTAGAAATTA TATTTAGAAA TTATATTTGT ATGTTATAGT TATAATTTAC ATAATTATAC 65492 .......... .......... .......... .......... .......... .......... 628 TTATGACAAA TTTTATGTTT GTTATGGAGC TTTTGATTTG TATAACTCAT CAGAAACATC 65552 .......... .......... .......... .......... .......... .......... 628 CAATTTTATA CAAATTGTTC TATTTTGTAT AATTTCATTA TACATTGTAA TTTGTATAAT 65612 .......... .......... .......... .......... .......... .......... 628 AAGATTTGCA TTTGTATATT AATAAGTGTA TAGGACGAAA ATATATGTAT TTGTATTTAT 65672 .......... .......... .......... .......... .......... .......... 628 ATATGCACTT TTCGCTCGCT TAATACAAAC ACAAACACAT TTTACATATC TTATATCGAA 65732 .......... .......... .......... .......... .......... .......... 628 ATGTATAAAA TGACTAATTG TATATCGAAA ATGATAATTA TACTGAAATC AGATGGAAAA 65792 .......... .......... .......... .......... .......... .......... 628 AAATGAAATG TTTGCTGCAA ATTACAATTA AAATAGACTA TGACTATAAC ATTTAATTTG 65852 .......... .......... .......... .......... .......... .......... 628 AATTAATCGT TTGCTATTTT ATACAATTTA TTTTTATAAT CTATCTAAAT CTAAATAACA 65912 .......... .......... .......... .......... .......... .......... 628 TCTGGCAACC CAAAATCTAG ATTATTGCTT CGCATGATGA TAAAGATTTT ATTTTTTTCA 65972 .......... .......... .......... .......... .......... .......... 628 AAAAATATGT TGGCTTAGTC TCTCATCCAA CTTTTGCTTC AATAGCTAAG TTGAAGTGTT 66032 .......... .......... .......... .......... .......... .......... 628 CAATGCAGAG AAATAGACTT GTGGAAAATG ATGGTTAAAA AAATTTCACT CAATTAAACA 66092 .......... .......... .......... .......... .......... .......... 628 CTTGGACACG TTTTGATATA ATAGATAAAA AAAAAATTCT ATAATAACGC ATTATAGAAT 66152 .......... .......... .......... .......... .......... .......... 628 TAATAATAGT TTGTACCGAT ATAAGCTATC TCGATCTCTA AGTAAAAAAA TAATCCTAAG 66212 .......... .......... .......... .......... .......... .......... 628 ATAACTTGCT CCGAAATAAA ATAGTTAAAA GGATAAAAAT ATTCCTTCAA ACATCTTTTT 66272 .......... .......... .......... .......... .......... .......... 628 TATACATCAC TTTACATTGA TTACACTAAT GAAATGCATT TATAACCAAA CAATTTATTC 66332 .......... .......... .......... .......... .......... .......... 628 ATAGAAATTA TACAATGCAT TCATTAAGAA ATTATATGAA TATTACTAAT TCCATCGTAA 66392 .......... .......... .......... .......... .......... .......... 628 TTTATATTCG AATCAAATAG TCTTTAATCC TTTTAATTTA AGTGGTACAA AAAGCATAGG 66452 .......... .......... .......... .......... .......... .......... 628 AGATATCGAA ACTGACGGCG CAAGTTAGTC CACAATCCAT TTTTAAAATA TCTAATAAAA 66512 .......... .......... .......... .......... .......... .......... 628 GATTTTAATT TAGAACCTTT TATATGTTAA GTCAGATTTC GGTGCAATAT GAAGGATTAT 66572 .......... .......... .......... .......... .......... .......... 628 AACATATATA TATTTGTTGT GGTCTTTTGT TAATTACTCT TTTTCTTCTA TGCAATATCT 66632 .......... .......... .......... .......... .......... .......... 628 GTTTGTTTGT TTATTTTATA TCATCAAACT AAGGATTAAA TAATATCACA TATAATACAT 66692 .......... .......... .......... .......... .......... .......... 628 GTATTCGATT CATGGTGTAT ATTTAGTTTT TTATGGTCCC TTTGATCAAC TATTGAAAAT 66752 .......... .......... .......... .......... .......... .......... 628 AAACTAATAT TTATAGTATA TTCATAGAAG TTTTCCATAA GTTTTGACAA AGATATTATG 66812 .......... .......... .......... .......... .......... .......... 628 AATACAAATA TGGGCCAGTT AAGTTTTTTG GGCCATCCTT ATGTATCTAA AGCTGAGCTA 66872 .......... .......... .......... .......... .......... .......... 628 CTTGTGGATT GGGCCTACAT AAAATGTCTT ATACTAAAAA CAAAGAGAAA AAAAGAGGGA 66932 .......... .......... .......... .......... .......... .......... 628 CGATCTATTT TAATGTCCCG TTTAGAATCG ATTTGGAATG ATTTTTGATT TTTGAACTTA 66992 .......... .......... .......... .......... .......... .......... 628 TAAGCCTAAA TTCATAGATT GAAATTCTAA CTTTTCTTAT AGTTTTATCT TAAAAGAACT 67052 .......... .......... .......... .......... .......... .......... 628 TTCTAAATCT CAATAAATAT TATTGTCACT AATCGAATAA TTAGGCATTA AGTTGTCAAG 67112 .......... .......... .......... .......... .......... .......... 628 TATGCATAAA CCTCTCGCAA TTTAAAACCA AAGTATGAAA GCAAAGATCA ATTATAACAA 67172 .......... .......... .......... .......... .......... .......... 628 AGATTCTATG ATTTATAATA ATAAAATACT AAGCTAATAA GATGCATAAA ATTCACCTTA 67232 .......... .......... .......... .......... .......... .......... 628 ATGTATAATA TTCTCATATG CTAAGGAAAT AAAACTTTAT AAAAAGAAAG CCAAAACTAT 67292 .......... .......... .......... .......... .......... .......... 628 TACTTTTAGA ACAAAATAAG TTAAACTTAT CCATCACTAA GCTAGGTAGT GAAGCCACAA 67352 .......... .......... .......... .......... .......... .......... 628 AACACCCTTT TTGCTTCTTG CTATTTTCAA GATTCATGTG ATTCTATCAC AAACTAAAGC 67412 .......... .......... .......... .......... .......... .......... 628 AATTAAAGTT GATTTTCCCC CTTCATATGG TATATCCAAC TCTACCCAAA AAAGGCACAA 67472 .......... .......... .......... .......... .......... .......... 628 GATTTTGCTT TTTGTTCATT ACTTGTGAAC TTCATTGTTG TTATGTATTT GTATTAGGTA 67532 .......... .......... .......... .......... .......... .......... 628 AAAAGAACAT ACAAAGTTAA CTATATTCTT TTCTTTATTT CTACTTTTCA TGGTTTCATT 67592 .......... .......... .......... .......... .......... .......... 628 TTCTTCCAAC AACAATAAAA AAGTGATGGT CGGACTGTTA GTCCCGTGAA CAATCTCATA 67652 .......... .......... .......... .......... .......... .......... 628 GGTACAAAAG CATATTCACC TCATCGAGTA GTACGAAATT AAGATTTTAA CTTTATGAGT 67712 .......... .......... .......... .......... .......... .......... 628 TCTGAATTTT ATAATAACAA TTTTAGATGA TATATAATAT TACTTTGAGC AAAATCTACC 67772 .......... .......... .......... .......... .......... .......... 628 GACTTCAATT TAACTCACAT GTAGGTTACT TGTACCGCTC CTACTCTCTT GTGTAATCAG 67832 .......... .......... .......... .......... .......... .......... 628 ATTATATTCT TTTCTTATGA TATTATTTTG TTTATTCCAG AATAAATATT GGCAAGTTGA 67892 .......... .......... .......... .......... .......... .......... 628 TATTCCACAT CAGTATCTCT AAAGTAATGT AACTAACCAT TGTTATAGGT TAAATGATTT 67952 .......... .......... .......... .......... .......... .......... 628 TAAGTGCTTA AATAGATACT TCCGTTTCAA TTTACACGAT ACTTTTATTT TAAAAATCAA 68012 .......... .......... .......... .......... .......... .......... 628 ATAAACCAAG CGTTACCCAA ATCATCTATG GTGAAATTAT TACTTATCAA TACGCTACAA 68072 .......... .......... .......... .......... .......... .......... 628 CTCCAACTTT TAAAACAAGA ATGAACATAC ACTATTATTA GATATTAACT CATATATGCA 68132 .......... .......... .......... .......... .......... .......... 628 ATGAAATATC TAGTTGATTC AAGATTAATC TCCCTTTTTC TTTTTCTCTC TCTTCCAACT 68192 .......... .......... .......... .......... .......... .......... 628 CACTCAAAGG CACACACATA CATTAAATGT TGACTTGAGA CATATCTGTC TACATACACT 68252 .......... .......... .......... .......... .......... .......... 628 TCCCATATAT ACATGTTCCC TTCAAGTATA AATTAGAAGC TTAACATACA ATTTTTCTAT 68312 .......... .......... .......... .......... .......... .......... 628 ATACTACTCA ATCTCCAAGA AAACCCTTTT TCCATCTCTT ACAAAACCAA ACCCTAATCT 68372 .......... .......... .......... .......... .......... .......... 628 TTATAATCTC ATCATGGGAC ATAATAGAGA AGAAACTATT GTTGGGACTA AAAAACTTGC 68432 .......... .......... .......... .......... .......... .......... 628 CATAGACAAT GGTCTCCAAA GAACAATATC TGATATCTCA TTTGAACTTA GCAAAGAAGT 68492 .......... .......... .......... .......... .......... .......... 628 AGCAGCATTA GTAGTATGTG ATCGCGATGA CGATGATGAT ATTGAGAAGA ATGTGCTTCC 68552 .......... .......... .......... .......... .......... .......... 628 ACCTATTTCT GAAGTTGAAG ATGCAAAGTG TGAGTGTTGT GGTATGTCTG AAGAATGTAC 68612 .......... .......... .......... .......... .......... .......... 628 ACTTGAATAT GTTAAGAGAG TTAAGGAGAA ATATTCAGGG AAGTTGATTT GTGGTTTGTG 68672 .......... .......... .......... .......... .......... .......... 628 TTCTGAGGCT GTGAAGGAAG AGATGGAGAA GAATGGAGGT AAGAAGTTAG AAGAAGCTTT 68732 .......... .......... .......... .......... .......... .......... 628 AAATGAGCAT ATGAATGCAT GTTCTAAGTT TAATAGACTT GGTAGGGCAT ATCCTTTGCT 68792 .......... .......... .......... .......... .......... .......... 628 TTATCAAGCT GAGGCTATGA GACAAATATT GAAAAAGAGT AGGGCTAAGT CTCTTAGTCC 68852 .......... .......... .......... .......... .......... .......... 628 TAGAGATAAT ACTCAAAAGA AAGGTGGGAT TGCTAGGAGT TCAAGTTGTA TTCCTGCAAT 68912 .......... .......... .......... .......... .......... .......... 628 TATAAAAGAT ATTAATAATC TTAAAATTGT TGATTGAGGA GAACATTCGT TTACTGATAT 68972 .......... .......... .......... .......... .......... .......... 628 TATTACATCA CTTTTCGATA CATATAGTCA TATTAGTTGT TTATTATATC GTCAGTGCAT 69032 .......... .......... .......... .......... .......... .......... 628 ATAACTTATT TTTAGGATTT GAGATCAACT AAGTTAGGGA GTTAATGCTT CCTTCATATT 69092 .......... .......... .......... .......... .......... .......... 628 ATATGAATAA CTGTTTTTTT TTCTTGTTAG AGTGTTGTAA TAATTATTCT AACCAATGGG 69152 .......... .......... .......... .......... .......... .......... 628 AATATTCTTG TATGTACTTC TTTATATAAA GTTGTTAAGT TAATCTCAGT GGTCTATATA 69212 .......... .......... .......... .......... .......... .......... 628 TTTAATTTCA TTTCATGTTC ATTTATTTCA GTAGAAAAAG TAATTGATGA TATTTTGTTT 69272 .......... .......... .......... .......... .......... .......... 628 TCTATATATT TTATTATTTT GTTTATCGTA TCTTAATTAT ATAATTGATA ATTTCTGTAT 69332 .......... .......... .......... .......... .......... .......... 628 ATACTCTATT CATCTCAGGC GTCATCACTC CGTGAAAGTT GAATGAATTT ATTGTTGTTG 69392 .......... .......... .......... .......... .......... .......... 628 CATGTTAATC AAAACAAGAT AACATCTTGT TATACGTGAC TATTGTTATA GGTAGAGTAA 69452 .......... .......... .......... .......... .......... .......... 628 TCTTCTTTCT AATGTTTAAA TGAATTTCCT CTTTCTTCTC ATCTTAAATT ATTTCTTAAT 69512 .......... .......... .......... .......... .......... .......... 628 GTATGGGGGT GTCCATGAAA AATGGTTGAT GTATGAAATT TTGAATTTGA CATATATAAC 69572 .......... .......... .......... .......... .......... .......... 628 AATATATTAC AATAGTATAA AAAAGTTGAG ACAATATTAT GCAACTTAAA TCTTTCTTCT 69632 .......... .......... .......... .......... .......... .......... 628 ATTTATTGGC TTGTTATTCA AAGCATGAGA CAAATGTTTC AATCTATTCC TCGTTTTTGA 69692 .......... .......... .......... .......... .......... .......... 628 ATTGGCAAAT GAATTCGTAA AGAATTATCA AATAAATCAT ATTAGTTATG AGCTATTGAA 69752 .......... .......... .......... .......... .......... .......... 628 TTAGACATAA ATTTCATTAC CAGTTTTATT ATTTTATATG GAAAATGTGT TTACACTAAA 69812 .......... .......... .......... .......... .......... .......... 628 TAAAATTATT TCAATCACAA ATCAAATTTA TATGGAGGGT AAAATACATA TTAATTAGAG 69872 .......... .......... .......... .......... .......... .......... 628 TAAATTATTT CCTACATGAA TATATTACTC TTTATATATA TATATATATA TATATATATA 69932 .......... .......... .......... .......... .......... .......... 628 TATATAGATA CACACACTTT TAAAATCAAA CACTTAAATC CTTTATATAA TAGAAATCTA 69992 .......... .......... .......... .......... .......... .......... 628 TACAAATAAG TGTTCATCTA ACTTACTAAG TTTTAAAAAG TTGAAATGGA ACAATAATAA 70052 .......... .......... .......... .......... .......... .......... 628 AAGTAAATCA AGGTTTTCTA AAAAAAGGAA GAAGAAGAGA CACTGTTATT CACTTTAAAT 70112 .......... .......... .......... .......... .......... .......... 628 ATAACATTAA GTATTAGAGA CAAAAAATTT TAAAAAATCA TTCTCTTCTT GTTTTCTTCC 70172 .......... .......... .......... .......... .......... .......... 628 ATTTTTACAA TTCCAAACTT GAAAAAACAA TAGAAACTGA CCTAAAATAA TAGCGAACAA 70232 .......... .......... .......... .......... .......... .......... 628 ATGTATGTTG TATACTATGT ATAAAATATA TTTTTTGACA CATAATAATA GATATTAAGC 70292 .......... .......... .......... .......... .......... .......... 628 TAGCAAAAAT AATTATTTCT GATTCAAAAA ATGAAAGGAA CCCACCTTTA AGTTCTCTTA 70352 .......... .......... .......... .......... .......... .......... 628 GTACCAATAT CCCTTGTTAG TTTTACAAAT CTCCAAAATC CCTCATTTTC ACGCATCAAA 70412 .......... .......... .......... .......... .......... .......... 628 TTAATGTATC AGTTCATCAA ATTAATGTAT CTCGCGCATC AGATTAATGT ATCTCGCGTA 70472 .......... .......... .......... .......... .......... .......... 628 TCAGATAAGT GTATCATGTA TAAAATGTAA TGTATCTTAC TTAACGACTA ATGTATCTCG 70532 .......... .......... .......... .......... .......... .......... 628 CACATCAGAT TAATGTATCA GTGCTTATAT TATTATATTA GTTTGAGGAA TTTCTGTAAT 70592 .......... .......... .......... .......... .......... .......... 628 TATATAACTT ATAAGGGACA AATGATAAAG TATATTATTT TTGTCCTTTA TTTACGGGTA 70652 .......... .......... .......... .......... .......... .......... 628 ACTTCCTCCC AAAACAATTC TACTGGGCCA AATTTAGGTT CCTAAATAGG CCTTAGAAAT 70712 .......... .......... .......... .......... .......... .......... 628 ATCATCTCTG TAGAAACATG ATAAATTTGA GGAGTGGCTC AAAGGAAAAA TGTCCAAATA 70772 .......... .......... .......... .......... .......... .......... 628 TTTGTACTAT GACTTTTCAC TGTTGGAAGT TGGTGATTGA TGGATGGCCC ATAAAATTCA 70832 .......... .......... .......... .......... .......... .......... 628 GGCTAATATC TACCTCAGTT TCCATGAATT GGCCCATCAT TATTTAAGTA GATTGGGGTG 70892 .......... .......... .......... .......... .......... .......... 628 GCTCAAGTTA CAAAGTCATC ATTCACTTCA AAAAAAAAAA AAAAAAA 70939 | |||||||||| ||||||| .......... .......... .........A AAAAAAAAAA AAAAAAA 646 hqPGS_C08HBa0294K15.1+_SGN-U335075+ (64354 64620) ******************************************************************************** EST sequence 28 +strand 647 n (File: SGN-U315283+) 1 ACGCCTTTTG CTTTATGAAA CTAAAAAATA AAAATTGAAG TTTTGAAACG ATAGAGGTTT 61 AAAATTTGAA AGTCTGCTTA GAGAGTTAAG GCTTAGAAAG TTTAACTAAG ACGGAATCTT 121 AAAAGATTAA TATCTCAAAT TTGCAAAGTT TGGCTAAGTA AATCGTGATA AAAGTTCAAA 181 TAAATTTGCA AAGGGTAAAA ATAAAAATAA TCAAATAAGT TAGTCGTTGG AAAACCGTAT 241 TTAACGGAGT GTCTTAGGTG CCTTAAACAC CTTCCTAAGA CGCTAATAAG AATCCCGAAT 301 CCTAAAAAAT ATTTTCAAAA CGACTTTTCT GTTTAAATTG TTTTGAGAAT GAGTTTTCTT 361 GATTTTTCTT AAAAATTAAG TGGCGACTCC TAAAGTCGAA AAATACTTTA AAATAAAACA 421 AACTCTTTTC GAAAAATCAC CTTTTTTCGA TAAAACAAAG CTTCTAGCTT GGACTGGATC 481 TTCTTCTTCA TGTCTTGATG CCTTGAAGTT CCGGCATGGA CTAGCTGTTT ATGTATTTTA 541 GCTTCTTAGA TACTCTTAGA TTTAGTAATT CGAAGTAGAT GTTCTTGTGA TGATAACTTC 601 CAGATTTTGG GAAATAATAG TTATTGAATT GGTTTTTATA AAAAAAA Predicted gene structure (within gDNA segment 58578 to 65556): Exon 1 63382 63390 ( 9 n); cDNA 451 459 ( 9 n); score: 0.889 Intron 1 63391 64432 (1042 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.78) Exon 2 64433 64586 ( 154 n); cDNA 460 611 ( 152 n); score: 0.851 MATCH C08HBa0294K15.1+ SGN-U315283+ 0.851 163 0.252 C PGS_C08HBa0294K15.1+_SGN-U315283+ (63382 63390,64433 64586) Alignment (genomic DNA sequence = upper lines): TAAAAGAAAA AGAGTTTGAA TAAGGAAAAA TAGAAAGAAC AGAAGAGAGG GACGAACGAG 63441 ||||| ||| TAAAACAAA. .......... .......... .......... .......... .......... 459 CGAGAGAAGA TAGAACGAAG AGGAAAGCAA AGACCTTGAA GAGTAGCTTG CGTGATCACG 63501 .......... .......... .......... .......... .......... .......... 459 AATTCTTCGA TGGAAGTAGG TTATGGTTTA TGTTATTTCA TAGTAAACTC TTAATAGCGA 63561 .......... .......... .......... .......... .......... .......... 459 ATGATATGTA TTGGGTAGTA TTGTAAAGTC TTCTATATGC TTAATTGTAT GCTTGCATGA 63621 .......... .......... .......... .......... .......... .......... 459 TGTGATTATG TAAGTGTAAT GAGTTGGAAA GATGAGGTTG TGAAGCTTAA ACCTAAAACC 63681 .......... .......... .......... .......... .......... .......... 459 CTCTGTGTTA ATGATGATGC CTTGGTATAA AAGAAGGCTT GATGAACTAA AAGAATGAGG 63741 .......... .......... .......... .......... .......... .......... 459 TTAGTGGATC AGGTGTCACG TTCCGACACC AGGATAGTAG TAGTGAATCG GGTGTCACGT 63801 .......... .......... .......... .......... .......... .......... 459 TCCGACACTA GGATAGTAAT AGTGGATCGG GTCACGTTCC GACACCAGGA TAGTAATAGT 63861 .......... .......... .......... .......... .......... .......... 459 GGATCGGGTG TCACGTTCTG ACACCAAGAT ACTAGTAATG GATCGGGTGT CACGTTCCGA 63921 .......... .......... .......... .......... .......... .......... 459 CACCAGGATA GTAGTAATGG ATCGGGTATC ACGTTCCGAC ACCAGGATAG TAGTAGTGGA 63981 .......... .......... .......... .......... .......... .......... 459 TCGGGTGTCA CGGTAGTAGT GGATCGGGTG TCACGTTCTG ACACCAGGAT AGTAGTAGAG 64041 .......... .......... .......... .......... .......... .......... 459 GATCGGAGTG TCACGTTCCG ACACCAGGAT AGTAAAAAGA ATGAATCTTG AATCATGTTA 64101 .......... .......... .......... .......... .......... .......... 459 ATATACTCAG GTTTAAAGAA ACTATTTCCC AAACGAGTAT GGTGTGGAGG CGTGAGTACT 64161 .......... .......... .......... .......... .......... .......... 459 CATGGATGCG CTTGGGTTGT GGCCAATGGT TATGGTACTT GTTGTTGTTG TCTGTTGAGT 64221 .......... .......... .......... .......... .......... .......... 459 ATTGTAGTTG ATTTTATGTT ATTATCTGAT ATATGTTATT TTCTATTTTG AGTTGGCCGA 64281 .......... .......... .......... .......... .......... .......... 459 TGATACCTAC TCAGTACTTG TGCCTTGTAC TGACCCCTAC TTGTATGTTT CTTTCTTGTT 64341 .......... .......... .......... .......... .......... .......... 459 ATTTTTGGAG TGCAGCAAAC GTGCCATCGA CTTCGACTCA ACCGCAACTC TAGCCAGACT 64401 .......... .......... .......... .......... .......... .......... 459 TCAGCATAAT CAGATTTCAG GGTGAGCTAT TGTTCCTAGT TCGGACTGGA TTCTTTCCTT 64461 | | |||| | |||||||| | | | ||| .......... .......... .......... .GCTTCTAGC TTGGACTGGA TCTTCTTCTT 488 CGCGTCTTGA TGTCTTGAAG TTCGGACATG GACCATCTCT TTTACTTATT TTAGCTTCTT 64521 | ||||||| || ||||||| ||| | |||| ||| | || |||| |||| |||||||||| CATGTCTTGA TGCCTTGAAG TTCCGGCATG GACTAGCT-G TTTATGTATT TTAGCTTCTT 547 AGATACTCTT AGATTTAGTA ATTTGAGGAT AGATGTTCTT GTGATGATGA CTTCCAGATT 64581 |||||||||| |||||||||| ||| || | | |||||||||| |||||||| | |||||||||| AGATACTCTT AGATTTAGTA ATTCGAAG-T AGATGTTCTT GTGATGATAA CTTCCAGATT 606 TTGGG 64586 ||||| TTGGG 611 hqPGS_C08HBa0294K15.1+_SGN-U315283+ (64433 64586) ******************************************************************************** EST sequence 61 -strand 1140 n (File: SGN-U324134-) 1 TTTTTTTTTT AAACTCTAAG TCGAAAACTT TATATACAAA ATGGTATAAA TATTATTATT 61 TAATTTACTA TCAGGTTATC GGTTAACCCA TTAAGAAAAA ACTTTAAACC GTTAAGAACC 121 GATACCCGAT AACAAAAAAA ATCAAAACCG ACATCAAAAC CACTAAACCA ATAACCCAAT 181 GATATAAACC AATAACTTTT TTATCGGTTC GGCTTATCGG TTTAGATTCG GTTTTGAACA 241 GCCCTACTCA AGTATATAAC CCTCAGAGAT AGGATGAGCT CTGTGAAAGA AACTTGAAAA 301 ACTCCTCTTT CCTTATTTCA AAGTTGTTCT TTGCATTGGT CAGCAATGTT TGCTCTCTCT 361 CTAAATCTTC CACACATCTT ACCCTTTCTC ACTTCAGCTC CTTCATCTGG ATCTCACTTC 421 CAAAATAGCT TTCACGTAGA TACAACCTTC CAGAACTCTT TGGAAATTTG ATTTGTACTT 481 CCCTTTTGCC TAGGGAAAAT ATGTCAGGAC TCTTTATGAT CCCACCATCC AATGATATGG 541 CTCCATCAAT TATTGGACTT ATATGTTCAA TAAATAAAAA AGCTCAACAA CGAAGCAAAT 601 AAGTACAATA ATACCTTTAC ACAACATTTA GTAAATTACT ATATTACCCC CGCCTAGAAA 661 AGTTGGAACG TTGACGAATA ATTGCTTTCC TAGCATCTTA TATATAGTTA TTAAAGTAAT 721 ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATAAAAGT TAAAAATGGT 781 TGAAAGTTTG AAATGGGCCA TTTCAATTAT AAATTTGAAA TGTATTTCTT TTTTGGGCAG 841 AGAAAGGAAA TATATATAAT TTTAGCTAAA TTTTATATTT AAGAAATTTA TAAATAATAT 901 AAATTCATAA TTTTATATTT ATGAATAAAA ATTTTAAATC ATAAATTTTA TATTTTAAAT 961 TAATCTATAA AAAATGCACA AGTTAACTAG GCATATGGGA TGATAACGAA TTTCACATTA 1021 TCAATGGAAT ATACTTTTTT CAAAAATTAA AATAAATAAA TCTGTTTAGA ATGCAAACAT 1081 GCCAAGCAGC TGGTTTAAAA TAGGCATGGT TCATGATGCA CATAACATTG TTTTTTGATT Predicted gene structure (within gDNA segment 63199 to 72577): Exon 1 64830 65006 ( 177 n); cDNA 77 253 ( 177 n); score: 0.890 PPA cDNA 10 1 MATCH C08HBa0294K15.1+ SGN-U324134- 0.890 177 0.155 C PGS_C08HBa0294K15.1+_SGN-U324134- (64830 65006) Alignment (genomic DNA sequence = upper lines): TATCGGTTAA CCCGTTAAGA AAAAACTTCA AACCGTTAAG AACCGATAAC CCGATAACAA 64889 |||||||||| ||| |||||| |||||||| | |||||||||| ||||||| || |||||||||| TATCGGTTAA CCCATTAAGA AAAAACTTTA AACCGTTAAG AACCGAT-AC CCGATAACAA 135 AA-AAATCAA AACCGTTATT AAAACCACTA AACTAATAAC CCAATACTAT AAACCAATAA 64948 || ||||||| ||||| || |||||||||| ||| |||||| ||||| ||| |||||||||| AAAAAATCAA AACCGACATC AAAACCACTA AACCAATAAC CCAATGATAT AAACCAATAA 195 CTTTTTTATC GATTCGGCTT ATCGGTTTCG ATTCGATTTT GAACTGCCCT ATGGACGT 65006 |||||||||| | |||||||| |||||||| | ||||| |||| |||| ||||| | | || CTTTTTTATC GGTTCGGCTT ATCGGTTTAG ATTCGGTTTT GAACAGCCCT ACTCAAGT 253 hqPGS_C08HBa0294K15.1+_SGN-U324134- (64830 65006) ******************************************************************************** EST sequence 3 +strand 1212 n (File: SGN-U312573+) 1 AACACTTTAT TTGTTCAAAA GTCATTCCTA TTAGACACAA AATGCTGACA TAGCAAAAAA 61 CATGTAATTC ACTTTCCTTG AGCGCGTTAA TTTATTAAAA ATAATATTTT TCTTTTTTTT 121 TTTCTTAATT TATACCCCTA AGTTAATTTT TTAAAAAATA ATTAACAAAA AAGAAGAAGA 181 ACAATTGTAT TCTTCTTCCC TATTTCTATC AACCCCACCC CACCCCACCC CAACCCCCAT 241 ACCCATGCAC CAGTGGTTAT CTTCTTCCCC CACCATTCTA ATGATTTCAA AATTCTTAGC 301 ATCAGTGGTT ATCTTCTTCC CCCTCCAACA TCACCATTGT AACAAAGAAT TGGAAAATCC 361 ATTTCCAAAA CCAAACCAAA GAGAGTAATT GAGCAATGGC TGCTTCCACA CAATGTTTCT 421 TGCACCAATA TCATGCACTA AGATCTAGCC CTGCTAGAAC ATCCTCTGTT TCATCTCCTA 481 AGCCTAACCA ATTGATTTGC CGTGCACAAA AGCAAGATGA TGCCAGCAAC GCCGCCGTCT 541 CGAGACGATT GGCTCTTACT CTCCTCATTG GTACTGCTGC CATTGGTTCC AAGGTTTCCC 601 CTGCAGATGC TGCCTATGGA GAAGCTGCAA ATGTTTTTGG TAAGCCAAAG GAAAACACTG 661 ATTTCTTGCC ATACAATGGA GATGGATTCA AGCTCCAAGT CCCAGCTAAA TGGAACCCCA 721 GCAAAGAAGT TGAGTACCCT GGTCAGGTTC TCAGATATGA AGACAACTTT GATTCCACAA 781 GTAATCTTAT TGTTGCAGTA ACTCCAACTG ACAAGAAGTC CATCACCGAC TACGGCTCCC 841 CTGAAGAGTT CCTCTCTAAA GTAATAATAC TTGTATCATG CATTTTATAG TTCAGCACTA 901 ATGGTTAGCT GACAACTTGA GTTTTCTTTT TGTTTCTCAA CAGGTGGACT ATCTGCTAGG 961 AAAGCAAGCT TACTTTGGTA AAACTGATTC AGAGGGAGGA TTTGAATCTG GTGCAGTGGC 1021 AACTGCTAAC CTGTTGGAGG CATCAAGCGC AACAGTGGGA GGAAAAGAGT ACTACTACTT 1081 GTCAGTATTG ACAAGAACTG CAGATGGAGA TGAAGGTGGA AAGCACCAGT TGATCACAGC 1141 CACAGTGAAT GATGGCAAAC TTTACATTTG CAAGGCACAA GCTGGTGACA AAAGATGGTT 1201 TAAGGTGCTA AA Predicted gene structure (within gDNA segment 70606 to 72577): Exon 1 71287 71611 ( 325 n); cDNA 1 326 ( 326 n); score: 0.895 MATCH C08HBa0294K15.1+ SGN-U312573+ 0.895 325 0.268 C PGS_C08HBa0294K15.1+_SGN-U312573+ (71287 71611) Alignment (genomic DNA sequence = upper lines): AACACTTTGT TTGTTCAAAA GTCATTCCTA TTAGACACAA AATACTGACA TGGCAAAAAA 71346 |||||||| | |||||||||| |||||||||| |||||||||| ||| |||||| | |||||||| AACACTTTAT TTGTTCAAAA GTCATTCCTA TTAGACACAA AATGCTGACA TAGCAAAAAA 60 CGTGTAATTC ACTTTCCTTG AGCGCGTTAA TTTATTAAAA GTAATATTTT TC-TTTTTTT 71405 | |||||||| |||||||||| |||||||||| |||||||||| ||||||||| || ||||||| CATGTAATTC ACTTTCCTTG AGCGCGTTAA TTTATTAAAA ATAATATTTT TCTTTTTTTT 120 TCTCTTAATT TATACCCCTA AGTTAATTTT TTTAAAAA-A ATTAACAAAA AAGAAGAAGA 71464 | |||||||| |||||||||| |||||||||| || ||||| | |||||||||| |||||||||| TTTCTTAATT TATACCCCTA AGTTAATTTT TTAAAAAATA ATTAACAAAA AAGAAGAAGA 180 ACTGTTGTCT TCTTCTTCTT CTTCCCTATT TCTATCAACC CCACCCCAAC CCAACCCCCA 71524 || |||| | |||||||| | ||| | | ||| |||||||| | |||||||||| ACAATTGTAT TCTTCTTCCC TATTTCTA-T CAACCCCACC CCACCCCACC CCAACCCCCA 239 TACCCATACA CCAGTGGTTA TCTTCTTCCC CCATCATTCT AATGATTTCA AAATTCTTAG 71584 ||||||| || |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| TACCCATGCA CCAGTGGTTA TCTTCTTCCC CCACCATTCT AATGATTTCA AAATTCTTAG 299 TATCAGTGGT TATATTCTTC CCCCACC 71611 ||||||||| ||| |||||| |||| || CATCAGTGGT TATCTTCTTC CCCCTCC 326 hqPGS_C08HBa0294K15.1+_SGN-U312573+ (71287 71611) ******************************************************************************** EST sequence 4 +strand 728 n (File: SGN-U332756+) 1 CCCACCCCAA CCCCTATCCC CATACACCAG TGGTTATCTT CTTCCCCATC ATTCTAATGA 61 TTTCAAAATT CTTAGTATCA GTGGTTATCT TCTTCCCCCA CCATTCTAAT GGTTTCAAAA 121 TTCTTAGCAT TTTGTTTCAT TTATAAATTT TTCGAAGAGA TTCTTTTCCC CATCTTTCTC 181 TACCTAAAAA ACGAGATGAA GTAAAAAGTT ATAATTAATA AAAGCTGATG AAAAAAAAAT 241 TTGTAGGGTT AAAGATAGAA CTGTACAGGG AGGGGGGGTC GCCATTAATG GAGTTAAAGA 301 AAATGTATGT TTTGTTCCAG TTGAAGGCAG GGAGGTGTTT AGGTTTTACT TTTTTTTTAA 361 ATTTTTTTTA CTTTAAAATA ATTTTTATTT TTTTTACTTT ATAATATAAT GTTTAAATAA 421 TTTTTTGGAT TAAAAAATAA CACATGTCAT TATTTGATTG GTCAAATTGA CATGTCAGCG 481 CGAGTGTATT TCACACATTC TCTATTTTTT GTTTATTCTC GAAAAAATGT TCAAATGATT 541 CAAATTCAGA ATGGTTGAAG TGTTCAATAG GTAGTACGTC TAGTTGAGGT GTCTAAATGA 601 ATAATCGGGA CAAGTTTGAG TGGCCGCATA TGACTTTGGC CTATTTTATT CTACCGTTGG 661 TTACGAATAT TTATTAGTAT ATATAGGAAT CCACCATTAA NGGAATATAT ATATATATAT 721 ATATATAT Predicted gene structure (within gDNA segment 70747 to 72577): Exon 1 71509 72142 ( 634 n); cDNA 1 638 ( 638 n); score: 0.921 MATCH C08HBa0294K15.1+ SGN-U332756+ 0.921 634 0.871 C PGS_C08HBa0294K15.1+_SGN-U332756+ (71509 72142) Alignment (genomic DNA sequence = upper lines): CCCAACCCAA CCCCCATACC CATACACCAG TGGTTATCTT CTTCCCCCAT CATTCTAATG 71568 |||| ||||| |||| || || |||||||||| |||||||||| ||| |||||| |||||||||| CCCACCCCAA CCCCTATCCC CATACACCAG TGGTTATCTT CTT-CCCCAT CATTCTAATG 59 ATTTCAAAAT TCTTAGTATC AGTGGTTATA TTCTTCCCCC ACCATTCTAA TGGTTTCAAA 71628 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| ATTTCAAAAT TCTTAGTATC AGTGGTTATC TTCTTCCCCC ACCATTCTAA TGGTTTCAAA 119 ATTCTTAGCA TTTTGTTTCA TTTATAAATT TTTTGAAGAG ATTCTTTTCC CATTCTTTCT 71688 |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| | ||||||| ATTCTTAGCA TTTTGTTTCA TTTATAAATT TTTCGAAGAG ATTCTTTTCC CCATCTTTCT 179 CTACCTAAAA AACGAGATGA AGTAAAAAGT TATAATTAAT AAAAAAGCTG ATGAAAAAAA 71748 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| |||||||||| CTACCTAAAA AACGAGATGA AGTAAAAAGT TATAATTAAT --AAAAGCTG ATGAAAAAAA 237 AA-TTGTCGG ATTAAAGATG GAACCGTATA GGGAGGGGAG GGTAGCCATT AATGGAGTTA 71807 || |||| || |||||||| |||| ||| | |||||||| | ||| |||||| |||||||||| AATTTGTAGG GTTAAAGATA GAACTGTACA GGGAGGGG-G GGTCGCCATT AATGGAGTTA 296 GGGGAAATGT ATGTTTTGTT CCAGTTGAAG GCAGGGA--A GTTTAGGTTT TACTTTTTTT 71865 | |||||| |||||||||| |||||||||| ||||||| |||||||||| |||||||||| AAGAAAATGT ATGTTTTGTT CCAGTTGAAG GCAGGGAGGT GTTTAGGTTT TACTTTTTTT 356 TT-CA-TTTT TTTACTTTAA AATAATTTTT ATTTTTTTTA CTTTATAATA TAATGTGTAA 71923 || | |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| TTAAATTTTT TTTACTTTAA AATAATTTTT ATTTTTTTTA CTTTATAATA TAATGTTTAA 416 ATAATTTTTT GGATT-AAAA ATAACACATG TCATTATTTC ATTGGTCAAA TTGACATGTC 71982 |||||||||| ||||| |||| |||||||||| ||||||||| |||||||||| |||||||||| ATAATTTTTT GGATTAAAAA ATAACACATG TCATTATTTG ATTGGTCAAA TTGACATGTC 476 A--GCGAGTG TATTTCACAC ATCCTCTATT TTTTGTTTAT TCTCGAAAAA ATGTTCAAAT 72040 | ||||||| |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| AGCGCGAGTG TATTTCACAC ATTCTCTATT TTTTGTTTAT TCTCGAAAAA ATGTTCAAAT 536 CGTTCAAATT CAGAATGGTT GAAGTGTTCA ATAGATCGTA CGTCTAGTTG AGGTGTCTAA 72100 |||||||| |||||||||| |||||||||| |||| | ||| |||||||||| |||||||||| GATTCAAATT CAGAATGGTT GAAGTGTTCA ATAGGTAGTA CGTCTAGTTG AGGTGTCTAA 596 ATGAGTAATC GGGACAAGTT TGAGTGGCCG CATATGACTT TG 72142 |||| ||||| |||||||||| |||||||||| |||||||||| || ATGAATAATC GGGACAAGTT TGAGTGGCCG CATATGACTT TG 638 hqPGS_C08HBa0294K15.1+_SGN-U332756+ (71509 72142) Total number of EST alignments reported: 94 ________________________________________________________________________________ Predicted gene locations (10) in segment 1 to 72577: PGL 1 (+ strand): 2526 11134 AGS-1 (2526 4532) SCR (e 0.740) Exon 1 2526 4532 (2007 n); score: 0.740 PGS (2526 3162) SGN-U339541+ PGS (2581 3329) SGN-U343842+ PGS (3034 3389) SGN-U335077+ PGS (3363 4056) SGN-U335071- PGS (3373 3939) SGN-U335080- PGS (3396 3920) SGN-U335078+ PGS (3575 4457) SGN-U315286+ PGS (3815 4075) SGN-U335075+ PGS (3816 4103) SGN-U316028+ PGS (3818 4263) SGN-U315280+ PGS (4234 4532) SGN-U335073+ 3-phase translation of AGS-1 (+strand): . . . . . . 2526 TGTAACGACCTGTTAGTCGTTTTGAGCAGTAGAGTTTATTTCTGGTAATAACTGTCTGGG C N D L L V V L S S R V Y F W - - L S G V T T C - S F - A V E F I S G N N C L G - R P V S R F E Q - S L F L V I T V W . . . . . . 2586 TTGACGGATCCCACGACGGACCGTCATGGGCACGACGGACCGTCGAGGGGGTCTCGTTCC L T D P T T D R H G H D G P S R G S R S - R I P R R T V M G T T D R R G G L V P V D G S H D G P S W A R R T V E G V S F . . . . . . 2646 AAAATACTTAGTTTCTGAAAAATTGGGTACTGAGAACAACTCTCTGAACTTCGCAACGGA K I L S F - K I G Y - E Q L S E L R N G K Y L V S E K L G T E N N S L N F A T E Q N T - F L K N W V L R T T L - T S Q R . . . . . . 2706 AGAGCAGGACGGACCGTCGTAGGCACGACGGACCGTCACATGGTCTTAAATAAAAATTGA R A G R T V V G T T D R H M V L N K N - E Q D G P S - A R R T V T W S - I K I E K S R T D R R R H D G P S H G L K - K L . . . . . . 2766 GTCTCTGAACTCTGTAACGACTTAGCAGGACGGACTATCGCAGGCACGACGGACCGTCAC V S E L C N D L A G R T I A G T T D R H S L N S V T T - Q D G L S Q A R R T V T S L - T L - R L S R T D Y R R H D G P S . . . . . . 2826 AGACTGAGTAACCCTGACTGGGTCGGATTTCTGTTAAAATTTTTTAAGGGGTGTTTTGGA R L S N P D W V G F L L K F F K G C F G D - V T L T G S D F C - N F L R G V L D Q T E - P - L G R I S V K I F - G V F W . . . . . . 2886 CTATTCCTGCTTATGATTATAAGGTTAGTGGTTTAATGTTAATAATTCAATTTCTTGGGG L F L L M I I R L V V - C - - F N F L G Y S C L - L - G - W F N V N N S I S W G T I P A Y D Y K V S G L M L I I Q F L G . . . . . . 2946 GTTAAAGAAGACAACCTTGGAATAAGTAATGGGTTACTTTTAGCATCTTTTATACTTAAT V K E D N L G I S N G L L L A S F I L N L K K T T L E - V M G Y F - H L L Y L I G - R R Q P W N K - W V T F S I F Y T - . . . . . . 3006 TATATGATAAATAGGGTAAAACAAAGGGATTTTGAAAGAGGAGAAAATTAAAAAAAAAAA Y M I N R V K Q R D F E R G E N - K K K I - - I G - N K G I L K E E K I K K K K L Y D K - G K T K G F - K R R K L K K K . . . . . . 3066 GAAAAAGAAGGGAGAACGAGTGAGAGGGAGAGAAGAACGAAGAGGAAAGCAAAGAACTTG E K E G R T S E R E R R T K R K A K N L K K K G E R V R G R E E R R G K Q R T - R K R R E N E - E G E K N E E E S K E L . . . . . . 3126 AGGAGTAGCTTGCGTGATCACGAATTCTTCGCTGGAGGTAGGTTATGGTTTATGCTATTT R S S L R D H E F F A G G R L W F M L F G V A C V I T N S S L E V G Y G L C Y F E E - L A - S R I L R W R - V M V Y A I . . . . . . 3186 CATAGTAAACTCTTAATAGCGAATGATATGTGTTGGGTAGTATTGTAAAGTCTTCTATAT H S K L L I A N D M C W V V L - S L L Y I V N S - - R M I C V G - Y C K V F Y M S - - T L N S E - Y V L G S I V K S S I . . . . . . 3246 GCTTAATTGTGTGCTTGCATGACGTGATTATATAATTGTGATAAAATAAGCATGATGAGG A - L C A C M T - L Y N C D K I S M M R L N C V L A - R D Y I I V I K - A - - G C L I V C L H D V I I - L - - N K H D E . . . . . . 3306 CTATTGAATCTTAAACCTTAAGACCTCTTTGTTAATGATGATGCCTTGGTATAAAAGAAG L L N L K P - D L F V N D D A L V - K K Y - I L N L K T S L L M M M P W Y K R R A I E S - T L R P L C - - - C L G I K E . . . . . . 3366 GCTTGATGAACTGAAAGAATGAGAATTAGGGGATCGGAGTGTCACGTTTCGACACCAGGA A - - T E R M R I R G S E C H V S T P G L D E L K E - E L G D R S V T F R H Q D G L M N - K N E N - G I G V S R F D T R . . . . . . 3426 TAGTATGGATCGGGTGTCACGTTCCGACACCAGGATAGTATAGATCGGGTGTCACGTTCC - Y G S G V T F R H Q D S I D R V S R S S M D R V S R S D T R I V - I G C H V P I V W I G C H V P T P G - Y R S G V T F . . . . . . 3486 GACACCAGGATAGTATGGATCGGGTGTCACGTTTTGACACCAGGATAGTAAAGAGAATGA D T R I V W I G C H V L T P G - - R E - T P G - Y G S G V T F - H Q D S K E N E R H Q D S M D R V S R F D T R I V K R M . . . . . . 3546 ATCTTGAATTATGCTAATATACTCAGATTTAATGAACCTGTTTCCCAAATGAGTATGGTG I L N Y A N I L R F N E P V S Q M S M V S - I M L I Y S D L M N L F P K - V W C N L E L C - Y T Q I - - T C F P N E Y G . . . . . . 3606 TGGAGGCTTGAGTCCTCATAGATGTGCTTGGGTTGTGCCCAATGGTTATGGTACTTGTTG W R L E S S - M C L G C A Q W L W Y L L G G L S P H R C A W V V P N G Y G T C C V E A - V L I D V L G L C P M V M V L V . . . . . . 3666 TTGTCACCTGTTTAGTATTGTAGTTGATTTTATGTTATTATCTGATATATATTGCTTTCT L S P V - Y C S - F Y V I I - Y I L L S C H L F S I V V D F M L L S D I Y C F L V V T C L V L - L I L C Y Y L I Y I A F . . . . . . 3726 ATTTTGAGTTGGCCGATGATACCTACTCAGTACTTGTGCCTTGTACTGACCCCTACTTGT I L S W P M I P T Q Y L C L V L T P T C F - V G R - Y L L S T C A L Y - P L L V Y F E L A D D T Y S V L V P C T D P Y L . . . . . . 3786 ATGTTTCTTTCTTTGTTATTTGTGGAGTGCAGCAAACGTGCCACAACTTCGACTCAACCG M F L S L L F V E C S K R A T T S T Q P C F F L C Y L W S A A N V P Q L R L N R Y V S F F V I C G V Q Q T C H N F D S T . . . . . . 3846 CAACTCTAGCCAGACTTCAGCATAATCAGATTTCAGGTGAGCTATTGTTCCTAGCTCGGA Q L - P D F S I I R F Q V S Y C S - L G N S S Q T S A - S D F R - A I V P S S D A T L A R L Q H N Q I S G E L L F L A R . . . . . . 3906 CTGGATTCTTTCTTTCAGGTCTTGATGTCTTGAAGTTCGGACATGGACCATCTCTTTTAT L D S F F Q V L M S - S S D M D H L F Y W I L S F R S - C L E V R T W T I S F I T G F F L S G L D V L K F G H G P S L L . . . . . . 3966 TTATTTTAGCTTCTTAGATACTCTTAGATTTAGTAATTTGAGGATAGATGTTCTTGTGAT L F - L L R Y S - I - - F E D R C S C D Y F S F L D T L R F S N L R I D V L V M F I L A S - I L L D L V I - G - M F L - . . . . . . 4026 GATGACTTCCAGATTTTGGGGATAATGATAAGTTTTGAGTTTTAGAAGTTAATTATTGAT D D F Q I L G I M I S F E F - K L I I D M T S R F W G - - - V L S F R S - L L I - - L P D F G D N D K F - V L E V N Y - . . . . . . 4086 TTCGTTAATGAGTTTTAAGTTTTCCGTATTATATTCTGTTTATTATGGTTGAAATGTTGG F V N E F - V F R I I F C L L W L K C W S L M S F K F S V L Y S V Y Y G - N V G F R - - V L S F P Y Y I L F I M V E M L . . . . . . 4146 GGTTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCACTCACGGCTCG G L D W L V R S H R R V S V G A T H G S V - I G W F A H I G G - V W V P L T A R G F R L V G S L T - E G K C G C H S R L . . . . . . 4206 TTTTGGGTCGTGACAAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATCACACAAGA F W V V T N L V S E H - V R W S H H T R F G S - Q T W Y Q S I R F V G L I T Q E V L G R D K L G I R A L G S L V S S H K . . . . . . 4266 ACAAGTCTAGTAGAGTCTTGAGGAATGGTAGGGGGACGCCTTTACTTTTCTTTGAGAGGC T S L V E S - G M V G G R L Y F S L R G Q V - - S L E E W - G D A F T F L - E A N K S S R V L R N G R G T P L L F F E R . . . . . . 4326 TATAAGACTTAAGGAAAATTCCATTCTTTCTTTCTTTCGTGCTATTACTTGGATCCAATT Y K T - G K F H S F F L S C Y Y L D P I I R L K E N S I L S F F R A I T W I Q L L - D L R K I P F F L S F V L L L G S N . . . . . . 4386 GGTATCTAGGTGATACAAATTGGTATCTGACCATCTTCACTCTATTTCGCAGATGGTTAG G I - V I Q I G I - P S S L Y F A D G - V S R - Y K L V S D H L H S I S Q M V R W Y L G D T N W Y L T I F T L F R R W L . . . . . . 4446 AACTAGAGCAACAGCTGCGCCGACACCAACACCGGCAAAACAAGATGCGTCTGAACCAGC N - S N S C A D T N T G K T R C V - T S T R A T A A P T P T P A K Q D A S E P A E L E Q Q L R R H Q H R Q N K M R L N Q . . . 4506 CACTGAGGCTGTAGCTCGAAGAGGAGC H - G C S S K R S T E A V A R R G P L R L - L E E E Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-1_AGS-1_PPS_1 (3689 3982) (frame '0'; 291 bp, 97 residues) 1 LILCYYLIYI AFYFELADDT YSVLVPCTDP YLYVSFFVIC GVQQTCHNFD STATLARLQH 61 NQISGELLFL ARTGFFLSGL DVLKFGHGPS LLFILAS- 3-phase translation of AGS-1 (-strand): . . . . . . 4532 GCTCCTCTTCGAGCTACAGCCTCAGTGGCTGGTTCAGACGCATCTTGTTTTGCCGGTGTT A P L R A T A S V A G S D A S C F A G V L L F E L Q P Q W L V Q T H L V L P V L S S S S Y S L S G W F R R I L F C R C . . . . . . 4472 GGTGTCGGCGCAGCTGTTGCTCTAGTTCTAACCATCTGCGAAATAGAGTGAAGATGGTCA G V G A A V A L V L T I C E I E - R W S V S A Q L L L - F - P S A K - S E D G Q W C R R S C C S S S N H L R N R V K M V . . . . . . 4412 GATACCAATTTGTATCACCTAGATACCAATTGGATCCAAGTAATAGCACGAAAGAAAGAA D T N L Y H L D T N W I Q V I A R K K E I P I C I T - I P I G S K - - H E R K K R Y Q F V S P R Y Q L D P S N S T K E R . . . . . . 4352 AGAATGGAATTTTCCTTAAGTCTTATAGCCTCTCAAAGAAAAGTAAAGGCGTCCCCCTAC R M E F S L S L I A S Q R K V K A S P Y E W N F P - V L - P L K E K - R R P P T K N G I F L K S Y S L S K K S K G V P L . . . . . . 4292 CATTCCTCAAGACTCTACTAGACTTGTTCTTGTGTGATGAGACCAACGAACCTAATGCTC H S S R L Y - T C S C V M R P T N L M L I P Q D S T R L V L V - - D Q R T - C S P F L K T L L D L F L C D E T N E P N A . . . . . . 4232 TGATACCAAGTTTGTCACGACCCAAAACGAGCCGTGAGTGGCACCCACACTTACCCTCCT - Y Q V C H D P K R A V S G T H T Y P P D T K F V T T Q N E P - V A P T L T L L L I P S L S R P K T S R E W H P H L P S . . . . . . 4172 ATGTGAGCGAACCAACCAATCTAAACCCCAACATTTCAACCATAATAAACAGAATATAAT M - A N Q P I - T P T F Q P - - T E Y N C E R T N Q S K P Q H F N H N K Q N I I Y V S E P T N L N P N I S T I I N R I - . . . . . . 4112 ACGGAAAACTTAAAACTCATTAACGAAATCAATAATTAACTTCTAAAACTCAAAACTTAT T E N L K L I N E I N N - L L K L K T Y R K T - N S L T K S I I N F - N S K L I Y G K L K T H - R N Q - L T S K T Q N L . . . . . . 4052 CATTATCCCCAAAATCTGGAAGTCATCATCACAAGAACATCTATCCTCAAATTACTAAAT H Y P Q N L E V I I T R T S I L K L L N I I P K I W K S S S Q E H L S S N Y - I S L S P K S G S H H H K N I Y P Q I T K . . . . . . 3992 CTAAGAGTATCTAAGAAGCTAAAATAAATAAAAGAGATGGTCCATGTCCGAACTTCAAGA L R V S K K L K - I K E M V H V R T S R - E Y L R S - N K - K R W S M S E L Q D S K S I - E A K I N K R D G P C P N F K . . . . . . 3932 CATCAAGACCTGAAAGAAAGAATCCAGTCCGAGCTAGGAACAATAGCTCACCTGAAATCT H Q D L K E R I Q S E L G T I A H L K S I K T - K K E S S P S - E Q - L T - N L T S R P E R K N P V R A R N N S S P E I . . . . . . 3872 GATTATGCTGAAGTCTGGCTAGAGTTGCGGTTGAGTCGAAGTTGTGGCACGTTTGCTGCA D Y A E V W L E L R L S R S C G T F A A I M L K S G - S C G - V E V V A R L L H - L C - S L A R V A V E S K L W H V C C . . . . . . 3812 CTCCACAAATAACAAAGAAAGAAACATACAAGTAGGGGTCAGTACAAGGCACAAGTACTG L H K - Q R K K H T S R G Q Y K A Q V L S T N N K E R N I Q V G V S T R H K Y - T P Q I T K K E T Y K - G S V Q G T S T . . . . . . 3752 AGTAGGTATCATCGGCCAACTCAAAATAGAAAGCAATATATATCAGATAATAACATAAAA S R Y H R P T Q N R K Q Y I S D N N I K V G I I G Q L K I E S N I Y Q I I T - N E - V S S A N S K - K A I Y I R - - H K . . . . . . 3692 TCAACTACAATACTAAACAGGTGACAACAACAAGTACCATAACCATTGGGCACAACCCAA S T T I L N R - Q Q Q V P - P L G T T Q Q L Q Y - T G D N N K Y H N H W A Q P K I N Y N T K Q V T T T S T I T I G H N P . . . . . . 3632 GCACATCTATGAGGACTCAAGCCTCCACACCATACTCATTTGGGAAACAGGTTCATTAAA A H L - G L K P P H H T H L G N R F I K H I Y E D S S L H T I L I W E T G S L N S T S M R T Q A S T P Y S F G K Q V H - . . . . . . 3572 TCTGAGTATATTAGCATAATTCAAGATTCATTCTCTTTACTATCCTGGTGTCAAAACGTG S E Y I S I I Q D S F S L L S W C Q N V L S I L A - F K I H S L Y Y P G V K T - I - V Y - H N S R F I L F T I L V S K R . . . . . . 3512 ACACCCGATCCATACTATCCTGGTGTCGGAACGTGACACCCGATCTATACTATCCTGGTG T P D P Y Y P G V G T - H P I Y T I L V H P I H T I L V S E R D T R S I L S W C D T R S I L S W C R N V T P D L Y Y P G . . . . . . 3452 TCGGAACGTGACACCCGATCCATACTATCCTGGTGTCGAAACGTGACACTCCGATCCCCT S E R D T R S I L S W C R N V T L R S P R N V T P D P Y Y P G V E T - H S D P L V G T - H P I H T I L V S K R D T P I P . . . . . . 3392 AATTCTCATTCTTTCAGTTCATCAAGCCTTCTTTTATACCAAGGCATCATCATTAACAAA N S H S F S S S S L L L Y Q G I I I N K I L I L S V H Q A F F Y T K A S S L T K - F S F F Q F I K P S F I P R H H H - Q . . . . . . 3332 GAGGTCTTAAGGTTTAAGATTCAATAGCCTCATCATGCTTATTTTATCACAATTATATAA E V L R F K I Q - P H H A Y F I T I I - R S - G L R F N S L I M L I L S Q L Y N R G L K V - D S I A S S C L F Y H N Y I . . . . . . 3272 TCACGTCATGCAAGCACACAATTAAGCATATAGAAGACTTTACAATACTACCCAACACAT S R H A S T Q L S I - K T L Q Y Y P T H H V M Q A H N - A Y R R L Y N T T Q H I I T S C K H T I K H I E D F T I L P N T . . . . . . 3212 ATCATTCGCTATTAAGAGTTTACTATGAAATAGCATAAACCATAACCTACCTCCAGCGAA I I R Y - E F T M K - H K P - P T S S E S F A I K S L L - N S I N H N L P P A K Y H S L L R V Y Y E I A - T I T Y L Q R . . . . . . 3152 GAATTCGTGATCACGCAAGCTACTCCTCAAGTTCTTTGCTTTCCTCTTCGTTCTTCTCTC E F V I T Q A T P Q V L C F P L R S S L N S - S R K L L L K F F A F L F V L L S R I R D H A S Y S S S S L L S S S F F S . . . . . . 3092 CCTCTCACTCGTTCTCCCTTCTTTTTCTTTTTTTTTTTAATTTTCTCCTCTTTCAAAATC P L T R S P F F F F F F L I F S S F K I L S L V L P S F S F F F - F S P L S K S P S H S F S L L F L F F F N F L L F Q N . . . . . . 3032 CCTTTGTTTTACCCTATTTATCATATAATTAAGTATAAAAGATGCTAAAAGTAACCCATT P L F Y P I Y H I I K Y K R C - K - P I L C F T L F I I - L S I K D A K S N P L P F V L P Y L S Y N - V - K M L K V T H . . . . . . 2972 ACTTATTCCAAGGTTGTCTTCTTTAACCCCCAAGAAATTGAATTATTAACATTAAACCAC T Y S K V V F F N P Q E I E L L T L N H L I P R L S S L T P K K L N Y - H - T T Y L F Q G C L L - P P R N - I I N I K P . . . . . . 2912 TAACCTTATAATCATAAGCAGGAATAGTCCAAAACACCCCTTAAAAAATTTTAACAGAAA - P Y N H K Q E - S K T P L K K F - Q K N L I I I S R N S P K H P L K N F N R N L T L - S - A G I V Q N T P - K I L T E . . . . . . 2852 TCCGACCCAGTCAGGGTTACTCAGTCTGTGACGGTCCGTCGTGCCTGCGATAGTCCGTCC S D P V R V T Q S V T V R R A C D S P S P T Q S G L L S L - R S V V P A I V R P I R P S Q G Y S V C D G P S C L R - S V . . . . . . 2792 TGCTAAGTCGTTACAGAGTTCAGAGACTCAATTTTTATTTAAGACCATGTGACGGTCCGT C - V V T E F R D S I F I - D H V T V R A K S L Q S S E T Q F L F K T M - R S V L L S R Y R V Q R L N F Y L R P C D G P . . . . . . 2732 CGTGCCTACGACGGTCCGTCCTGCTCTTCCGTTGCGAAGTTCAGAGAGTTGTTCTCAGTA R A Y D G P S C S S V A K F R E L F S V V P T T V R P A L P L R S S E S C S Q Y S C L R R S V L L F R C E V Q R V V L S . . . . . . 2672 CCCAATTTTTCAGAAACTAAGTATTTTGGAACGAGACCCCCTCGACGGTCCGTCGTGCCC P N F S E T K Y F G T R P P R R S V V P P I F Q K L S I L E R D P L D G P S C P T Q F F R N - V F W N E T P S T V R R A . . . . . . 2612 ATGACGGTCCGTCGTGGGATCCGTCAACCCAGACAGTTATTACCAGAAATAAACTCTACT M T V R R G I R Q P R Q L L P E I N S T - R S V V G S V N P D S Y Y Q K - T L L H D G P S W D P S T Q T V I T R N K L Y . . . 2552 GCTCAAAACGACTAACAGGTCGTTACA A Q N D - Q V V T L K T T N R S L C S K R L T G R Y Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-1_AGS-1_PPS_1 (4530 4114) (frame '0'; 414 bp, 138 residues) 1 SSSSYSLSGW FRRILFCRCW CRRSCCSSSN HLRNRVKMVR YQFVSPRYQL DPSNSTKERK 61 NGIFLKSYSL SKKSKGVPLP FLKTLLDLFL CDETNEPNAL IPSLSRPKTS REWHPHLPSY 121 VSEPTNLNPN ISTIINRI- >C08HBa0294K15.1-_PGL-1_AGS-1_PPS_2 (2750 2538) (frame '1'; 210 bp, 70 residues) 1 DHVTVRRAYD GPSCSSVAKF RELFSVPNFS ETKYFGTRPP RRSVVPMTVR RGIRQPRQLL 61 PEINSTAQND - AGS-2 (3364 3458,3489 4517) SCR (e 0.732 d 0.000 a 0.000,e 0.786) Exon 1 3364 3458 ( 95 n); score: 0.732 Intron 1 3459 3488 ( 30 n); Pd: 0.000 Pa: 0.000 Exon 2 3489 4517 (1029 n); score: 0.786 PGS (3364 3458,3489 4517) SGN-U315285+ 3-phase translation of AGS-2 (+strand): . . . . . . 3364 AGGCTTGATGAACTGAAAGAATGAGAATTAGGGGATCGGAGTGTCACGTTTCGACACCAG R L D E L K E - E L G D R S V T F R H Q G L M N - K N E N - G I G V S R F D T R A - - T E R M R I R G S E C H V S T P . . . . : . . 3424 GATAGTATGGATCGGGTGTCACGTTCCGACACCAG : ACCAGGATAGTATGGATCGGGTGTC D S M D R V S R S D T R : P G - Y G S G V I V W I G C H V P T P : D Q D S M D R V S G - Y G S G V T F R H Q : T R I V W I G C . . . . . . 3514 ACGTTTTGACACCAGGATAGTAAAGAGAATGAATCTTGAATTATGCTAATATACTCAGAT T F - H Q D S K E N E S - I M L I Y S D R F D T R I V K R M N L E L C - Y T Q I H V L T P G - - R E - I L N Y A N I L R . . . . . . 3574 TTAATGAACCTGTTTCCCAAATGAGTATGGTGTGGAGGCTTGAGTCCTCATAGATGTGCT L M N L F P K - V W C G G L S P H R C A - - T C F P N E Y G V E A - V L I D V L F N E P V S Q M S M V W R L E S S - M C . . . . . . 3634 TGGGTTGTGCCCAATGGTTATGGTACTTGTTGTTGTCACCTGTTTAGTATTGTAGTTGAT W V V P N G Y G T C C C H L F S I V V D G L C P M V M V L V V V T C L V L - L I L G C A Q W L W Y L L L S P V - Y C S - . . . . . . 3694 TTTATGTTATTATCTGATATATATTGCTTTCTATTTTGAGTTGGCCGATGATACCTACTC F M L L S D I Y C F L F - V G R - Y L L L C Y Y L I Y I A F Y F E L A D D T Y S F Y V I I - Y I L L S I L S W P M I P T . . . . . . 3754 AGTACTTGTGCCTTGTACTGACCCCTACTTGTATGTTTCTTTCTTTGTTATTTGTGGAGT S T C A L Y - P L L V C F F L C Y L W S V L V P C T D P Y L Y V S F F V I C G V Q Y L C L V L T P T C M F L S L L F V E . . . . . . 3814 GCAGCAAACGTGCCACAACTTCGACTCAACCGCAACTCTAGCCAGACTTCAGCATAATCA A A N V P Q L R L N R N S S Q T S A - S Q Q T C H N F D S T A T L A R L Q H N Q C S K R A T T S T Q P Q L - P D F S I I . . . . . . 3874 GATTTCAGGTGAGCTATTGTTCCTAGCTCGGACTGGATTCTTTCTTTCAGGTCTTGATGT D F R - A I V P S S D W I L S F R S - C I S G E L L F L A R T G F F L S G L D V R F Q V S Y C S - L G L D S F F Q V L M . . . . . . 3934 CTTGAAGTTCGGACATGGACCATCTCTTTTATTTATTTTAGCTTCTTAGATACTCTTAGA L E V R T W T I S F I Y F S F L D T L R L K F G H G P S L L F I L A S - I L L D S - S S D M D H L F Y L F - L L R Y S - . . . . . . 3994 TTTAGTAATTTGAGGATAGATGTTCTTGTGATGATGACTTCCAGATTTTGGGGATAATGA F S N L R I D V L V M M T S R F W G - - L V I - G - M F L - - - L P D F G D N D I - - F E D R C S C D D D F Q I L G I M . . . . . . 4054 TAAGTTTTGAGTTTTAGAAGTTAATTATTGATTTCGTTAATGAGTTTTAAGTTTTCCGTA - V L S F R S - L L I S L M S F K F S V K F - V L E V N Y - F R - - V L S F P Y I S F E F - K L I I D F V N E F - V F R . . . . . . 4114 TTATATTCTGTTTATTATGGTTGAAATGTTGGGGTTTAGATTGGTTGGTTCGCTCACATA L Y S V Y Y G - N V G V - I G W F A H I Y I L F I M V E M L G F R L V G S L T - I I F C L L W L K C W G L D W L V R S H . . . . . . 4174 GGAGGGTAAGTGTGGGTGCCACTCACGGCTCGTTTTGGGTCGTGACAAACTTGGTATCAG G G - V W V P L T A R F G S - Q T W Y Q E G K C G C H S R L V L G R D K L G I R R R V S V G A T H G S F W V V T N L V S . . . . . . 4234 AGCATTAGGTTCGTTGGTCTCATCACACAAGAACAAGTCTAGTAGAGTCTTGAGGAATGG S I R F V G L I T Q E Q V - - S L E E W A L G S L V S S H K N K S S R V L R N G E H - V R W S H H T R T S L V E S - G M . . . . . . 4294 TAGGGGGACGCCTTTACTTTTCTTTGAGAGGCTATAAGACTTAAGGAAAATTCCATTCTT - G D A F T F L - E A I R L K E N S I L R G T P L L F F E R L - D L R K I P F F V G G R L Y F S L R G Y K T - G K F H S . . . . . . 4354 TCTTTCTTTCGTGCTATTACTTGGATCCAATTGGTATCTAGGTGATACAAATTGGTATCT S F F R A I T W I Q L V S R - Y K L V S L S F V L L L G S N W Y L G D T N W Y L F F L S C Y Y L D P I G I - V I Q I G I . . . . . . 4414 GACCATCTTCACTCTATTTCGCAGATGGTTAGAACTAGAGCAACAGCTGCGCCGACACCA D H L H S I S Q M V R T R A T A A P T P T I F T L F R R W L E L E Q Q L R R H Q - P S S L Y F A D G - N - S N S C A D T . . . . . 4474 ACACCGGCAAAACAAGATGCGTCTGAACCAGCCACTGAGGCTGT T P A K Q D A S E P A T E A H R Q N K M R L N Q P L R L N T G K T R C V - T S H - G C Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-1_AGS-2_PPS_1 (3689 3982) (frame '2'; 291 bp, 97 residues) 1 LILCYYLIYI AFYFELADDT YSVLVPCTDP YLYVSFFVIC GVQQTCHNFD STATLARLQH 61 NQISGELLFL ARTGFFLSGL DVLKFGHGPS LLFILAS- AGS-3 (3893 4063,4153 4159) SCR (e 0.842 d 0.000 a 0.994,e 1.000) Exon 1 3893 4063 ( 171 n); score: 0.842 Intron 1 4064 4152 ( 89 n); Pd: 0.000 Pa: 0.994 Exon 2 4153 4159 ( 7 n); score: 1.000 PGS (3893 4063,4153 4159) SGN-U315283+ 3-phase translation of AGS-3 (+strand): . . . . . . 3893 TTCCTAGCTCGGACTGGATTCTTTCTTTCAGGTCTTGATGTCTTGAAGTTCGGACATGGA F L A R T G F F L S G L D V L K F G H G S - L G L D S F F Q V L M S - S S D M D P S S D W I L S F R S - C L E V R T W . . . . . . 3953 CCATCTCTTTTATTTATTTTAGCTTCTTAGATACTCTTAGATTTAGTAATTTGAGGATAG P S L L F I L A S - I L L D L V I - G - H L F Y L F - L L R Y S - I - - F E D R T I S F I Y F S F L D T L R F S N L R I . . . . . . : 4013 ATGTTCTTGTGATGATGACTTCCAGATTTTGGGGATAATGATAAGTTTTGA : ATTGGTT M F L - - - L P D F G D N D K F - : I G C S C D D D F Q I L G I M I S F E : L V D V L V M M T S R F W G - - - V L : N W Maximal non-overlapping open reading frames (>= 64 codons): none AGS-4 (4556 5550,5587 7221) SCR (e 0.865 d 0.000 a 0.000,e 0.858) Exon 1 4556 5550 ( 995 n); score: 0.865 Intron 1 5551 5586 ( 36 n); Pd: 0.000 Pa: 0.000 Exon 2 5587 7221 (1635 n); score: 0.858 PGS (4556 5323) SGN-U335931+ PGS (4556 4909) SGN-U335932- PGS (4558 5550,5587 6019) SGN-U317064- PGS (4665 5545) SGN-U346572+ PGS (5289 5550,5587 6024) SGN-U335930- PGS (5390 5550,5587 5974) SGN-U335933- PGS (5829 6699) SGN-U335935- PGS (5876 6633) SGN-U317065- PGS (5898 6231) SGN-U335937- PGS (5930 6723) SGN-U335936+ PGS (6510 7221) SGN-U326740- 3-phase translation of AGS-4 (+strand): . . . . . . 4556 GGTACTAGGGCGGTGACTCCTCCACCGACTGAGGAAGTATTAAGAGAGGGTGAGGAAGGG G T R A V T P P P T E E V L R E G E E G V L G R - L L H R L R K Y - E R V R K G Y - G G D S S T D - G S I K R G - G R . . . . . . 4616 GGAAATGAACAAGTGCAGAACGAGGAATTACCACCCCAACCTACCCTAGAGATGATTAAT G N E Q V Q N E E L P P Q P T L E M I N E M N K C R T R N Y H P N L P - R - L I G K - T S A E R G I T T P T Y P R D D - . . . . . . 4676 CAGGTTCTTGCTTATCTTAGCGGGTTATCTGATCAAGGCCAGACACCTCCAGTGTTTTCT Q V L A Y L S G L S D Q G Q T P P V F S R F L L I L A G Y L I K A R H L Q C F L S G S C L S - R V I - S R P D T S S V F . . . . . . 4736 GCACCAGTACCTCAGGTTCCGGGAGTACAACATACAGCTGCTGTGGCTCCCCGCATGGAT A P V P Q V P G V Q H T A A V A P R M D H Q Y L R F R E Y N I Q L L W L P A W M C T S T S G S G S T T Y S C C G S P H G . . . . . . 4796 GCCTCATTGGAAATAGGCACGTTTCCTCGGTTGACTACAGGGCCTATAATGACAAGTGAC A S L E I G T F P R L T T G P I M T S D P H W K - A R F L G - L Q G L - - Q V T C L I G N R H V S S V D Y R A Y N D K - . . . . . . 4856 CAGCACGAACTTTTCAGTAAGTTCTTGAAGTTGAAACCTCCAGTTTTCAAGGGTGCTGAA Q H E L F S K F L K L K P P V F K G A E S T N F S V S S - S - N L Q F S R V L N P A R T F Q - V L E V E T S S F Q G C - . . . . . . 4916 TCTGAGGATGCCTATGACTTTCTGGTTGATTGTCATGAGTTGCTACATAAGATGCGCATA S E D A Y D F L V D C H E L L H K M R I L R M P M T F W L I V M S C Y I R C A - I - G C L - L S G - L S - V A T - D A H . . . . . . 4976 GTGGAACGATTTGGCGTTGAGTTTGTGACCTATCAGTTTTAGGGGAACGCCAAAATGTGG V E R F G V E F V T Y Q F - G N A K M W W N D L A L S L - P I S F R G T P K C G S G T I W R - V C D L S V L G E R Q N V . . . . . . 5036 TGGCGGTCATATGTTGAGTGTCAACCAGCACAGTCACCACCTATGACTTGGGCATCATTC W R S Y V E C Q P A Q S P P M T W A S F G G H M L S V N Q H S H H L - L G H H S V A V I C - V S T S T V T T Y D L G I I . . . . . . 5096 TCTAGCTTGTTTATGGAGAATTATATACCTCGGACTTTGAGGGATAGGAGGAGAGATAAG S S L F M E N Y I P R T L R D R R R D K L A C L W R I I Y L G L - G I G G E I S L - L V Y G E L Y T S D F E G - E E R - . . . . . . 5156 TTCCTGAGCTTAGAGCAAGGCAGGATGTCGGTTACTGCTTATGAGGCTAAGTTTTGTGCA F L S L E Q G R M S V T A Y E A K F C A S - A - S K A G C R L L L M R L S F V H V P E L R A R Q D V G Y C L - G - V L C . . . . . . 5216 CTATCCAGGTATGCCACCCAGCTTTGCTTCAGTCCACAAGAGCGGATTCGTCGTTTCGTG L S R Y A T Q L C F S P Q E R I R R F V Y P G M P P S F A S V H K S G F V V S - T I Q V C H P A L L Q S T R A D S S F R . . . . . . 5276 AAAGGGTTGAGGTCAGATTTGCGGATTTCAGCCTTACAGGTAGCTGCTGCAGCAAAATCC K G L R S D L R I S A L Q V A A A A K S K G - G Q I C G F Q P Y R - L L Q Q N P E R V E V R F A D F S L T G S C C S K I . . . . . . 5336 TTTCAGGAGGTGGTAGATTTTGTAATAGAAGTGGAGGGAGTGAAGCCAGACGACTTCACC F Q E V V D F V I E V E G V K P D D F T F R R W - I L - - K W R E - S Q T T S P L S G G G R F C N R S G G S E A R R L H . . . . . . 5396 ATGGCATCAATATCTAAGAAGTTTCATAAAGGAGGTGATTTTAATGGTTTTTAATCCAGA M A S I S K K F H K G G D F N G F - S R W H Q Y L R S F I K E V I L M V F N P E H G I N I - E V S - R R - F - W F L I Q . . . . . . 5456 GGGCAGAGTTCAGGAGGTTATCCAGCCCGACCTATTCAGTCTTCACTACAAGCTGTAGCT G Q S S G G Y P A R P I Q S S L Q A V A G R V Q E V I Q P D L F S L H Y K L - L R A E F R R L S S P T Y S V F T T S C S . . . . : . . 5516 GGGGGTCCACCGCAGACCGGTCAACATTTCTCTGA : GAGACCTATGCTTTAATCAAGAGAG G G P P Q T G Q H F S E : R P M L - S R E G V H R R P V N I S L : R D L C F N Q E S W G S T A D R S T F L - : E T Y A L I K R . . . . . . 5612 TGTTATGGATGTGGAGAGACTGGACATATTAAGAGGTATTGTCCAAAACAGAGTTACAGA C Y G C G E T G H I K R Y C P K Q S Y R V M D V E R L D I L R G I V Q N R V T D V L W M W R D W T Y - E V L S K T E L Q . . . . . . 5672 CCCCCAATAGTCAGAGGTAGAGGTGGTCATGGGAGAGGTCGCTATTCTGGAGGACGTGGT P P I V R G R G G H G R G R Y S G G R G P Q - S E V E V V M G E V A I L E D V V T P N S Q R - R W S W E R S L F W R T W . . . . . . 5732 GGCCGAGGTAATGGTGGTCACCAAAACGGCCGGGGTGACAGGCAAACTGGAACTTCTGTA G R G N G G H Q N G R G D R Q T G T S V A E V M V V T K T A G V T G K L E L L - W P R - W W S P K R P G - Q A N W N F C . . . . . . 5792 GCTCAACATTGTAGGGGCAACGGGCAGACCGGTGATAGGGCCCATTGTTATGCTTTCCCT A Q H C R G N G Q T G D R A H C Y A F P L N I V G A T G R P V I G P I V M L S L S S T L - G Q R A D R - - G P L L C F P . . . . . . 5852 GGGAGGTCTGAAGCGGAGACATCTGATGCCGTCATCACAGGTAATCTTTTGGTTTGTGAT G R S E A E T S D A V I T G N L L V C D G G L K R R H L M P S S Q V I F W F V I W E V - S G D I - C R H H R - S F G L - . . . . . . 5912 TGCATGGCTTCTGTATTGTTTGATCCTGGATCCACATTTTCATATGTATCTTCCTCATTT C M A S V L F D P G S T F S Y V S S S F A W L L Y C L I L D P H F H M Y L P H L L H G F C I V - S W I H I F I C I F L I . . . . . . 5972 GCTACTGGTCTTAATTTACATTATGAATTGCTTGACATACCTATTCGTGTTTCTACTCCG A T G L N L H Y E L L D I P I R V S T P L L V L I Y I M N C L T Y L F V F L L R C Y W S - F T L - I A - H T Y S C F Y S . . . . . . 6032 GTGGGTGAGTCTGTGATAGTTGAAAAAGTGTATAGGTCTTGTCTTGTGACTTTTGTGGGG V G E S V I V E K V Y R S C L V T F V G W V S L - - L K K C I G L V L - L L W G G G - V C D S - K S V - V L S C D F C G . . . . . . 6092 AACAATACTCATGTAGACTTGGTTATCTTAGAAATGGTTGACTTCGATGTAATTCTGGGT N N T H V D L V I L E M V D F D V I L G T I L M - T W L S - K W L T S M - F W V E Q Y S C R L G Y L R N G - L R C N S G . . . . . . 6152 ATGACTTGGCTGTCTCCAAATTTTGCAATCTTAGATTGTAATGCTAAAACTGTAACGTCG M T W L S P N F A I L D C N A K T V T S - L G C L Q I L Q S - I V M L K L - R R Y D L A V S K F C N L R L - C - N C N V . . . . . . 6212 GCCAAGCCTGGGACAGATCCGTTAGTGTGGGAGGGTGACTACACTTCCACTCCATTTCGT A K P G T D P L V W E G D Y T S T P F R P S L G Q I R - C G R V T T L P L H F V G Q A W D R S V S V G G - L H F H S I S . . . . . . 6272 ATTATCTCCTTTCTTCGTGCTAAGAGAATGGTTAGTAAGGGTTGTTTAGCTTTCTTGACA I I S F L R A K R M V S K G C L A F L T L S P F F V L R E W L V R V V - L S - H Y Y L L S S C - E N G - - G L F S F L D . . . . . . 6332 CACCTCTAGGATGATACTACCCAAGTACCTTCAATTGAGTCGATTTCGATAGTCCGTGAG H L - D D T T Q V P S I E S I S I V R E T S R M I L P K Y L Q L S R F R - S V S T P L G - Y Y P S T F N - V D F D S P - . . . . . . 6392 TTTCTAGATGTGTTTCCTGCAGACCTTCCTCGTATGCCACCGAATAGAGATATTTATTTC F L D V F P A D L P R M P P N R D I Y F F - M C F L Q T F L V C H R I E I F I S V S R C V S C R P S S Y A T E - R Y L F . . . . . . 6452 TGTATTGATCTGGAGCCGGGTACTCGCCCCATTTCCATACCCCATTATAGGATGGCTCCC C I D L E P G T R P I S I P H Y R M A P V L I W S R V L A P F P Y P I I G W L P L Y - S G A G Y S P H F H T P L - D G S . . . . . . 6512 GCTGAGTTAAGAGAGTTAAAGGCCCAACTTCAAGAGTTGTTAAGCAAAGGCTTTATTAGA A E L R E L K A Q L Q E L L S K G F I R L S - E S - R P N F K S C - A K A L L D R - V K R V K G P T S R V V K Q R L Y - . . . . . . 6572 CCAAGTGCATCCCCTTGGGGTGCTCCTATTTTATTTGTGAAGAAGAAGGATGGAAGTTTT P S A S P W G A P I L F V K K K D G S F Q V H P L G V L L F Y L - R R R M E V F T K C I P L G C S Y F I C E E E G W K F . . . . . . 6632 CGGATGTGCATAGACTATAGGCAACTGAATAAGGTAATCATTAAGAACAAGTATCCTCTT R M C I D Y R Q L N K V I I K N K Y P L G C A - T I G N - I R - S L R T S I L F S D V H R L - A T E - G N H - E Q V S S . . . . . . 6692 CCTCGCATCGATGATTTGTTCGATCAGTTACAAGGTGCTTGTACCTTCTAAAAAATTGAT P R I D D L F D Q L Q G A C T F - K I D L A S M I C S I S Y K V L V P S K K L I S S H R - F V R S V T R C L Y L L K N - . . . . . . 6752 TTGAGATCTGGTTATCATCAATTAAAAATACGGGCAACGGATGTGCCCAAGACTGCTTTT L R S G Y H Q L K I R A T D V P K T A F - D L V I I N - K Y G Q R M C P R L L F F E I W L S S I K N T G N G C A Q D C F . . . . . . 6812 TGGACCACGTATGGGCATTATGAGTTCCTAGTAATGTCTTTTGGGCTTACGAATTCCCCT W T T Y G H Y E F L V M S F G L T N S P G P R M G I M S S - - C L L G L R I P L L D H V W A L - V P S N V F W A Y E F P . . . . . . 6872 GCTGCTTTCATGAGCTTAATGAGCGGGATTTTTAAGCCATATCTGGATCTCTTCGTCATT A A F M S L M S G I F K P Y L D L F V I L L S - A - - A G F L S H I W I S S S L C C F H E L N E R D F - A I S G S L R H . . . . . . 6932 GTATTCATCGATGACATACTGGTATACTCAAAGAGCAAGAAAGAACATGAGGAGCACTTG V F I D D I L V Y S K S K K E H E E H L Y S S M T Y W Y T Q R A R K N M R S T - C I H R - H T G I L K E Q E R T - G A L . . . . . . 6992 AGAATGGTATTGGAAATGTTGAGGGAGAAAGAGCTTTATGCCAAATTCTCTAAGTGTGAG R M V L E M L R E K E L Y A K F S K C E E W Y W K C - G R K S F M P N S L S V S E N G I G N V E G E R A L C Q I L - V - . . . . . . 7052 TTTTGGCTAGATTCAGTGTCCTTCTTGGGGCGTGTGGTTTATAAGGATGAAGTGATGGTG F W L D S V S F L G R V V Y K D E V M V F G - I Q C P S W G V W F I R M K - W W V L A R F S V L L G A C G L - G - S D G . . . . . . 7112 GATCCTTCTAAGGTCGAAGCAGTGAAGAGTTGGGTAAGACCTACTAATGTTACAGAGGTA D P S K V E A V K S W V R P T N V T E V I L L R S K Q - R V G - D L L M L Q R - G S F - G R S S E E L G K T Y - C Y R G . . . . . 7172 AGGAGCTTCGTTGGTTTAGCTAGCTACTACCGTCGATTTGTCAAGGGATT R S F V G L A S Y Y R R F V K G G A S L V - L A T T V D L S R D K E L R W F S - L L P S I C Q G I Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-1_AGS-4_PPS_1 (5603 6340) (frame '1'; 735 bp, 245 residues) 1 SRECYGCGET GHIKRYCPKQ SYRPPIVRGR GGHGRGRYSG GRGGRGNGGH QNGRGDRQTG 61 TSVAQHCRGN GQTGDRAHCY AFPGRSEAET SDAVITGNLL VCDCMASVLF DPGSTFSYVS 121 SSFATGLNLH YELLDIPIRV STPVGESVIV EKVYRSCLVT FVGNNTHVDL VILEMVDFDV 181 ILGMTWLSPN FAILDCNAKT VTSAKPGTDP LVWEGDYTST PFRIISFLRA KRMVSKGCLA 241 FLTHL- >C08HBa0294K15.1+_PGL-1_AGS-4_PPS_2 (6743 7219) (frame '1'; 477 bp, 159 residues) 1 KIDLRSGYHQ LKIRATDVPK TAFWTTYGHY EFLVMSFGLT NSPAAFMSLM SGIFKPYLDL 61 FVIVFIDDIL VYSKSKKEHE EHLRMVLEML REKELYAKFS KCEFWLDSVS FLGRVVYKDE 121 VMVDPSKVEA VKSWVRPTNV TEVRSFVGLA SYYRRFVKG >C08HBa0294K15.1+_PGL-1_AGS-4_PPS_3 (4556 5017) (frame '1'; 459 bp, 153 residues) 1 GTRAVTPPPT EEVLREGEEG GNEQVQNEEL PPQPTLEMIN QVLAYLSGLS DQGQTPPVFS 61 APVPQVPGVQ HTAAVAPRMD ASLEIGTFPR LTTGPIMTSD QHELFSKFLK LKPPVFKGAE 121 SEDAYDFLVD CHELLHKMRI VERFGVEFVT YQF- >C08HBa0294K15.1+_PGL-1_AGS-4_PPS_4 (5018 5449) (frame '1'; 429 bp, 143 residues) 1 GNAKMWWRSY VECQPAQSPP MTWASFSSLF MENYIPRTLR DRRRDKFLSL EQGRMSVTAY 61 EAKFCALSRY ATQLCFSPQE RIRRFVKGLR SDLRISALQV AAAAKSFQEV VDFVIEVEGV 121 KPDDFTMASI SKKFHKGGDF NGF- >C08HBa0294K15.1+_PGL-1_AGS-4_PPS_5 (6341 6742) (frame '1'; 399 bp, 133 residues) 1 DDTTQVPSIE SISIVREFLD VFPADLPRMP PNRDIYFCID LEPGTRPISI PHYRMAPAEL 61 RELKAQLQEL LSKGFIRPSA SPWGAPILFV KKKDGSFRMC IDYRQLNKVI IKNKYPLPRI 121 DDLFDQLQGA CTF- AGS-5 (5026 5340,6121 6614) SCR (e 0.827 d 0.000 a 0.000,e 0.883) Exon 1 5026 5340 ( 315 n); score: 0.827 Intron 1 5341 6120 ( 780 n); Pd: 0.000 Pa: 0.000 Exon 2 6121 6614 ( 494 n); score: 0.883 PGS (5026 5340,6121 6614) SGN-U335938- 3-phase translation of AGS-5 (+strand): . . . . . . 5026 CAAAATGTGGTGGCGGTCATATGTTGAGTGTCAACCAGCACAGTCACCACCTATGACTTG Q N V V A V I C - V S T S T V T T Y D L K M W W R S Y V E C Q P A Q S P P M T W K C G G G H M L S V N Q H S H H L - L . . . . . . 5086 GGCATCATTCTCTAGCTTGTTTATGGAGAATTATATACCTCGGACTTTGAGGGATAGGAG G I I L - L V Y G E L Y T S D F E G - E A S F S S L F M E N Y I P R T L R D R R G H H S L A C L W R I I Y L G L - G I G . . . . . . 5146 GAGAGATAAGTTCCTGAGCTTAGAGCAAGGCAGGATGTCGGTTACTGCTTATGAGGCTAA E R - V P E L R A R Q D V G Y C L - G - R D K F L S L E Q G R M S V T A Y E A K G E I S S - A - S K A G C R L L L M R L . . . . . . 5206 GTTTTGTGCACTATCCAGGTATGCCACCCAGCTTTGCTTCAGTCCACAAGAGCGGATTCG V L C T I Q V C H P A L L Q S T R A D S F C A L S R Y A T Q L C F S P Q E R I R S F V H Y P G M P P S F A S V H K S G F . . . . . . 5266 TCGTTTCGTGAAAGGGTTGAGGTCAGATTTGCGGATTTCAGCCTTACAGGTAGCTGCTGC S F R E R V E V R F A D F S L T G S C C R F V K G L R S D L R I S A L Q V A A A V V S - K G - G Q I C G F Q P Y R - L L . . : . . . . 5326 AGCAAAATCCTTTCA : AGAAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTGTC S K I L S : R N G - L R C N S G Y D L A V A K S F Q : E M V D F D V I L G M T W L S Q Q N P F : K K W L T S M - F W V - L G C . . . . . . 6166 TCCAAATTTTGCAATCTTAGATTGTAATGCTAAAACTGTAACGTCGGCCAAGCCTGGGAC S K F C N L R L - C - N C N V G Q A W D P N F A I L D C N A K T V T S A K P G T L Q I L Q S - I V M L K L - R R P S L G . . . . . . 6226 AGATCCGTTAGTGTGGGAGGGTGACTACACTTCCACTCCATTTCGTATTATCTCCTTTCT R S V S V G G - L H F H S I S Y Y L L S D P L V W E G D Y T S T P F R I I S F L Q I R - C G R V T T L P L H F V L S P F . . . . . . 6286 TCGTGCTAAGAGAATGGTTAGTAAGGGTTGTTTAGCTTTCTTGACACACCTCTAGGATGA S C - E N G - - G L F S F L D T P L G - R A K R M V S K G C L A F L T H L - D D F V L R E W L V R V V - L S - H T S R M . . . . . . 6346 TACTACCCAAGTACCTTCAATTGAGTCGATTTCGATAGTCCGTGAGTTTCTAGATGTGTT Y Y P S T F N - V D F D S P - V S R C V T T Q V P S I E S I S I V R E F L D V F I L P K Y L Q L S R F R - S V S F - M C . . . . . . 6406 TCCTGCAGACCTTCCTCGTATGCCACCGAATAGAGATATTTATTTCTGTATTGATCTGGA S C R P S S Y A T E - R Y L F L Y - S G P A D L P R M P P N R D I Y F C I D L E F L Q T F L V C H R I E I F I S V L I W . . . . . . 6466 GCCGGGTACTCGCCCCATTTCCATACCCCATTATAGGATGGCTCCCGCTGAGTTAAGAGA A G Y S P H F H T P L - D G S R - V K R P G T R P I S I P H Y R M A P A E L R E S R V L A P F P Y P I I G W L P L S - E . . . . . . 6526 GTTAAAGGCCCAACTTCAAGAGTTGTTAAGCAAAGGCTTTATTAGACCAAGTGCATCCCC V K G P T S R V V K Q R L Y - T K C I P L K A Q L Q E L L S K G F I R P S A S P S - R P N F K S C - A K A L L D Q V H P . . . 6586 TTGGGGTGCTCCTATTTTATTTGTGAAGA L G C S Y F I C E W G A P I L F V K L G V L L F Y L - R Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-1_AGS-5_PPS_1 (5027 5340,6121 6340) (frame '2'; 531 bp, 177 residues) 1 KMWWRSYVEC QPAQSPPMTW ASFSSLFMEN YIPRTLRDRR RDKFLSLEQG RMSVTAYEAK 61 FCALSRYATQ LCFSPQERIR RFVKGLRSDL RISALQVAAA AKSFQEMVDF DVILGMTWLS 121 PNFAILDCNA KTVTSAKPGT DPLVWEGDYT STPFRIISFL RAKRMVSKGC LAFLTHL- >C08HBa0294K15.1+_PGL-1_AGS-5_PPS_2 (6341 6613) (frame '2'; 273 bp, 91 residues) 1 DDTTQVPSIE SISIVREFLD VFPADLPRMP PNRDIYFCID LEPGTRPISI PHYRMAPAEL 61 RELKAQLQEL LSKGFIRPSA SPWGAPILFV K AGS-6 (5558 6400,6683 6839) SCR (e 0.820 d 0.000 a 0.000,e 0.904) Exon 1 5558 6400 ( 843 n); score: 0.820 Intron 1 6401 6682 ( 282 n); Pd: 0.000 Pa: 0.000 Exon 2 6683 6839 ( 157 n); score: 0.904 PGS (5558 6402) SGN-U335939- PGS (6357 6400,6683 6839) SGN-U345415- 3-phase translation of AGS-6 (+strand): . . . . . . 5558 GGTTATCCCCAGACTCTGTCGTTCTCATAGAGACCTATGCTTTAATCAAGAGAGTGTTAT G Y P Q T L S F S - R P M L - S R E C Y V I P R L C R S H R D L C F N Q E S V M L S P D S V V L I E T Y A L I K R V L . . . . . . 5618 GGATGTGGAGAGACTGGACATATTAAGAGGTATTGTCCAAAACAGAGTTACAGACCCCCA G C G E T G H I K R Y C P K Q S Y R P P D V E R L D I L R G I V Q N R V T D P Q W M W R D W T Y - E V L S K T E L Q T P . . . . . . 5678 ATAGTCAGAGGTAGAGGTGGTCATGGGAGAGGTCGCTATTCTGGAGGACGTGGTGGCCGA I V R G R G G H G R G R Y S G G R G G R - S E V E V V M G E V A I L E D V V A E N S Q R - R W S W E R S L F W R T W W P . . . . . . 5738 GGTAATGGTGGTCACCAAAACGGCCGGGGTGACAGGCAAACTGGAACTTCTGTAGCTCAA G N G G H Q N G R G D R Q T G T S V A Q V M V V T K T A G V T G K L E L L - L N R - W W S P K R P G - Q A N W N F C S S . . . . . . 5798 CATTGTAGGGGCAACGGGCAGACCGGTGATAGGGCCCATTGTTATGCTTTCCCTGGGAGG H C R G N G Q T G D R A H C Y A F P G R I V G A T G R P V I G P I V M L S L G G T L - G Q R A D R - - G P L L C F P W E . . . . . . 5858 TCTGAAGCGGAGACATCTGATGCCGTCATCACAGGTAATCTTTTGGTTTGTGATTGCATG S E A E T S D A V I T G N L L V C D C M L K R R H L M P S S Q V I F W F V I A W V - S G D I - C R H H R - S F G L - L H . . . . . . 5918 GCTTCTGTATTGTTTGATCCTGGATCCACATTTTCATATGTATCTTCCTCATTTGCTACT A S V L F D P G S T F S Y V S S S F A T L L Y C L I L D P H F H M Y L P H L L L G F C I V - S W I H I F I C I F L I C Y . . . . . . 5978 GGTCTTAATTTACATTATGAATTGCTTGACATACCTATTCGTGTTTCTACTCCGGTGGGT G L N L H Y E L L D I P I R V S T P V G V L I Y I M N C L T Y L F V F L L R W V W S - F T L - I A - H T Y S C F Y S G G . . . . . . 6038 GAGTCTGTGATAGTTGAAAAAGTGTATAGGTCTTGTCTTGTGACTTTTGTGGGGAACAAT E S V I V E K V Y R S C L V T F V G N N S L - - L K K C I G L V L - L L W G T I - V C D S - K S V - V L S C D F C G E Q . . . . . . 6098 ACTCATGTAGACTTGGTTATCTTAGAAATGGTTGACTTCGATGTAATTCTGGGTATGACT T H V D L V I L E M V D F D V I L G M T L M - T W L S - K W L T S M - F W V - L Y S C R L G Y L R N G - L R C N S G Y D . . . . . . 6158 TGGCTGTCTCCAAATTTTGCAATCTTAGATTGTAATGCTAAAACTGTAACGTCGGCCAAG W L S P N F A I L D C N A K T V T S A K G C L Q I L Q S - I V M L K L - R R P S L A V S K F C N L R L - C - N C N V G Q . . . . . . 6218 CCTGGGACAGATCCGTTAGTGTGGGAGGGTGACTACACTTCCACTCCATTTCGTATTATC P G T D P L V W E G D Y T S T P F R I I L G Q I R - C G R V T T L P L H F V L S A W D R S V S V G G - L H F H S I S Y Y . . . . . . 6278 TCCTTTCTTCGTGCTAAGAGAATGGTTAGTAAGGGTTGTTTAGCTTTCTTGACACACCTC S F L R A K R M V S K G C L A F L T H L P F F V L R E W L V R V V - L S - H T S L L S S C - E N G - - G L F S F L D T P . . . . . . 6338 TAGGATGATACTACCCAAGTACCTTCAATTGAGTCGATTTCGATAGTCCGTGAGTTTCTA - D D T T Q V P S I E S I S I V R E F L R M I L P K Y L Q L S R F R - S V S F - L G - Y Y P S T F N - V D F D S P - V S . : . . . . . 6398 GAT : TATCCTCTTCCTCGCATCGATGATTTGTTCGATCAGTTACAAGGTGCTTGTACCTTC D : Y P L P R I D D L F D Q L Q G A C T F I : I L F L A S M I C S I S Y K V L V P S R : L S S S S H R - F V R S V T R C L Y L . . . . . . 6740 TAAAAAATTGATTTGAGATCTGGTTATCATCAATTAAAAATACGGGCAACGGATGTGCCC - K I D L R S G Y H Q L K I R A T D V P K K L I - D L V I I N - K Y G Q R M C P L K N - F E I W L S S I K N T G N G C A . . . . 6800 AAGACTGCTTTTTGGACCACGTATGGGCATTATGAGTTCC K T A F W T T Y G H Y E F R L L F G P R M G I M S S Q D C F L D H V W A L - V Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-1_AGS-6_PPS_1 (5603 6340) (frame '1'; 735 bp, 245 residues) 1 SRECYGCGET GHIKRYCPKQ SYRPPIVRGR GGHGRGRYSG GRGGRGNGGH QNGRGDRQTG 61 TSVAQHCRGN GQTGDRAHCY AFPGRSEAET SDAVITGNLL VCDCMASVLF DPGSTFSYVS 121 SSFATGLNLH YELLDIPIRV STPVGESVIV EKVYRSCLVT FVGNNTHVDL VILEMVDFDV 181 ILGMTWLSPN FAILDCNAKT VTSAKPGTDP LVWEGDYTST PFRIISFLRA KRMVSKGCLA 241 FLTHL- AGS-7 (7450 8481) SCR (e 0.901) Exon 1 7450 8481 (1032 n); score: 0.901 PGS (7450 8034) SGN-U328094- PGS (7701 8481) SGN-U336382- PGS (8153 8438) SGN-U336381- 3-phase translation of AGS-7 (+strand): . . . . . . 7450 GCAATTAAAGGTGCATGAACGTAATTATCCAACCCATGATTTGGAGTTGGCTGCGGTAGT A I K G A - T - L S N P - F G V G C G S Q L K V H E R N Y P T H D L E L A A V V N - R C M N V I I Q P M I W S W L R - . . . . . . 7510 GTTTGCATTAAAGCAATGGAGACATTATCTATATGGGGTTAAGTGTGAAGTCTATACGGA V C I K A M E T L S I W G - V - S L Y G F A L K Q W R H Y L Y G V K C E V Y T D C L H - S N G D I I Y M G L S V K S I R . . . . . . 7570 TCATCGTAGTTTACAGTATATCTTTACTCAGAAAGATTTGAATTTGAGACAGAGGAGATG S S - F T V Y L Y S E R F E F E T E E M H R S L Q Y I F T Q K D L N L R Q R R W I I V V Y S I S L L R K I - I - D R G D . . . . . . 7630 GATGGAACTACTGAAGGACTATGATATCACTATCTTGTATCATCCGGAAAAAGCTAATGT D G T T E G L - Y H Y L V S S G K S - C M E L L K D Y D I T I L Y H P E K A N V G W N Y - R T M I S L S C I I R K K L M . . . . . . 7690 TGTGGCAGATGTTTTAAGTAGAAAGGCAGGGAACATGGGAAGTCTAGCCCACTTGCAGGT C G R C F K - K G R E H G K S S P L A G V A D V L S R K A G N M G S L A H L Q V L W Q M F - V E R Q G T W E V - P T C R . . . . . . 7750 TTCTAGACGCCCATTGGCTAGAGAGGTTCAGACTCTGGATAATGACCTTATGAGGCTAGA F - T P I G - R G S D S G - - P Y E A R S R R P L A R E V Q T L D N D L M R L E F L D A H W L E R F R L W I M T L - G - . . . . . . 7810 AGTAAATGAGAAGGGAGGATTTTTGGTCTGTGTGGAGGCAAGATCTTCCTTTCTTGATAA S K - E G R I F G L C G G K I F L S - - V N E K G G F L V C V E A R S S F L D K K - M R R E D F W S V W R Q D L P F L I . . . . . . 7870 GATTAAAGGAAAGCAGTTTACCGATGAGAAACTGATCTGGATCCGAGATAAGGTGTTGCG D - R K A V Y R - E T D L D P R - G V A I K G K Q F T D E K L I W I R D K V L R R L K E S S L P M R N - S G S E I R C C . . . . . . 7930 AGGAGAGGTTAAAGAAGCAAAAATCGATGAGGAAGGTGTTTTGAGGATTAAGGGAAGGGT R R G - R S K N R - G R C F E D - G K G G E V K E A K I D E E G V L R I K G R V E E R L K K Q K S M R K V F - G L R E G . . . . . . 7990 ACGTGTACCCCGCGTCGATGACTTGATTCACACTGTTCTTACAGACGCTCATAGTTCAAG T C T P R R - L D S H C S Y R R S - F K R V P R V D D L I H T V L T D A H S S R Y V Y P A S M T - F T L F L Q T L I V Q . . . . . . 8050 GTATTCTATACATCCTGGTGCAACCAAGATGTATCGTGATCTAAAGCAACATTTTTGGTG V F Y T S W C N Q D V S - S K A T F L V Y S I H P G A T K M Y R D L K Q H F W - G I L Y I L V Q P R C I V I - S N I F G . . . . . . 8110 AAGTAGGATGAAGCGTGACATTGTTAATTTTGTTGCTCAATGCCCGAATTGTCTGCAGGT K - D E A - H C - F C C S M P E L S A G S R M K R D I V N F V A Q C P N C L Q V E V G - S V T L L I L L L N A R I V C R . . . . . . 8170 AAAGTATGAACACCAGAGGCCTGGAGGGACACTTCAGAGAATGCCCATTCCTGAATGGAA K V - T P E A W R D T S E N A H S - M E K Y E H Q R P G G T L Q R M P I P E W K - S M N T R G L E G H F R E C P F L N G . . . . . . 8230 GTGGGAGAGAATTGCAATGGACTTCGTGGTTAGTCTTCCAAAGACAACGGGTAAGTATGA V G E N C N G L R G - S S K D N G - V - W E R I A M D F V V S L P K T T G K Y D S G R E L Q W T S W L V F Q R Q R V S M . . . . . . 8290 CTCCATTTGGGTAATTGTTGACAGATTAACTAAGTCTGCTCATTTCATTCCGGTCAAGGT L H L G N C - Q I N - V C S F H S G Q G S I W V I V D R L T K S A H F I P V K V T P F G - L L T D - L S L L I S F R S R . . . . . . 8350 GACTTATAATGCAGAGAAGTTAGCCAAACTTTACATCTCAGAAATTGTTCGATTGCATGG D L - C R E V S Q T L H L R N C S I A W T Y N A E K L A K L Y I S E I V R L H G - L I M Q R S - P N F T S Q K L F D C M . . . . . . 8410 AGTTCCACTTTCCATTATATCAGATAGAGGTACGCAGTTTACTTCTAAATTTTGGAGAAT S S T F H Y I R - R Y A V Y F - I L E N V P L S I I S D R G T Q F T S K F W R I E F H F P L Y Q I E V R S L L L N F G E . . 8470 ATTGCATGCCGA I A C R L H A Y C M P Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-1_AGS-7_PPS_1 (7451 8110) (frame '2'; 657 bp, 219 residues) 1 QLKVHERNYP THDLELAAVV FALKQWRHYL YGVKCEVYTD HRSLQYIFTQ KDLNLRQRRW 61 MELLKDYDIT ILYHPEKANV VADVLSRKAG NMGSLAHLQV SRRPLAREVQ TLDNDLMRLE 121 VNEKGGFLVC VEARSSFLDK IKGKQFTDEK LIWIRDKVLR GEVKEAKIDE EGVLRIKGRV 181 RVPRVDDLIH TVLTDAHSSR YSIHPGATKM YRDLKQHFW- >C08HBa0294K15.1+_PGL-1_AGS-7_PPS_2 (8111 8479) (frame '2'; 369 bp, 123 residues) 1 SRMKRDIVNF VAQCPNCLQV KYEHQRPGGT LQRMPIPEWK WERIAMDFVV SLPKTTGKYD 61 SIWVIVDRLT KSAHFIPVKV TYNAEKLAKL YISEIVRLHG VPLSIISDRG TQFTSKFWRI 121 LHA 3-phase translation of AGS-7 (-strand): . . . . . . 8481 TCGGCATGCAATATTCTCCAAAATTTAGAAGTAAACTGCGTACCTCTATCTGATATAATG S A C N I L Q N L E V N C V P L S D I M R H A I F S K I - K - T A Y L Y L I - W G M Q Y S P K F R S K L R T S I - Y N . . . . . . 8421 GAAAGTGGAACTCCATGCAATCGAACAATTTCTGAGATGTAAAGTTTGGCTAACTTCTCT E S G T P C N R T I S E M - S L A N F S K V E L H A I E Q F L R C K V W L T S L G K W N S M Q S N N F - D V K F G - L L . . . . . . 8361 GCATTATAAGTCACCTTGACCGGAATGAAATGAGCAGACTTAGTTAATCTGTCAACAATT A L - V T L T G M K - A D L V N L S T I H Y K S P - P E - N E Q T - L I C Q Q L C I I S H L D R N E M S R L S - S V N N . . . . . . 8301 ACCCAAATGGAGTCATACTTACCCGTTGTCTTTGGAAGACTAACCACGAAGTCCATTGCA T Q M E S Y L P V V F G R L T T K S I A P K W S H T Y P L S L E D - P R S P L Q Y P N G V I L T R C L W K T N H E V H C . . . . . . 8241 ATTCTCTCCCACTTCCATTCAGGAATGGGCATTCTCTGAAGTGTCCCTCCAGGCCTCTGG I L S H F H S G M G I L - S V P P G L W F S P T S I Q E W A F S E V S L Q A S G N S L P L P F R N G H S L K C P S R P L . . . . . . 8181 TGTTCATACTTTACCTGCAGACAATTCGGGCATTGAGCAACAAAATTAACAATGTCACGC C S Y F T C R Q F G H - A T K L T M S R V H T L P A D N S G I E Q Q N - Q C H A V F I L Y L Q T I R A L S N K I N N V T . . . . . . 8121 TTCATCCTACTTCACCAAAAATGTTGCTTTAGATCACGATACATCTTGGTTGCACCAGGA F I L L H Q K C C F R S R Y I L V A P G S S Y F T K N V A L D H D T S W L H Q D L H P T S P K M L L - I T I H L G C T R . . . . . . 8061 TGTATAGAATACCTTGAACTATGAGCGTCTGTAAGAACAGTGTGAATCAAGTCATCGACG C I E Y L E L - A S V R T V - I K S S T V - N T L N Y E R L - E Q C E S S H R R M Y R I P - T M S V C K N S V N Q V I D . . . . . . 8001 CGGGGTACACGTACCCTTCCCTTAATCCTCAAAACACCTTCCTCATCGATTTTTGCTTCT R G T R T L P L I L K T P S S S I F A S G V H V P F P - S S K H L P H R F L L L A G Y T Y P S L N P Q N T F L I D F C F . . . . . . 7941 TTAACCTCTCCTCGCAACACCTTATCTCGGATCCAGATCAGTTTCTCATCGGTAAACTGC L T S P R N T L S R I Q I S F S S V N C - P L L A T P Y L G S R S V S H R - T A F N L S S Q H L I S D P D Q F L I G K L . . . . . . 7881 TTTCCTTTAATCTTATCAAGAAAGGAAGATCTTGCCTCCACACAGACCAAAAATCCTCCC F P L I L S R K E D L A S T Q T K N P P F L - S Y Q E R K I L P P H R P K I L P L S F N L I K K G R S C L H T D Q K S S . . . . . . 7821 TTCTCATTTACTTCTAGCCTCATAAGGTCATTATCCAGAGTCTGAACCTCTCTAGCCAAT F S F T S S L I R S L S R V - T S L A N S H L L L A S - G H Y P E S E P L - P M L L I Y F - P H K V I I Q S L N L S S Q . . . . . . 7761 GGGCGTCTAGAAACCTGCAAGTGGGCTAGACTTCCCATGTTCCCTGCCTTTCTACTTAAA G R L E T C K W A R L P M F P A F L L K G V - K P A S G L D F P C S L P F Y L K W A S R N L Q V G - T S H V P C L S T - . . . . . . 7701 ACATCTGCCACAACATTAGCTTTTTCCGGATGATACAAGATAGTGATATCATAGTCCTTC T S A T T L A F S G - Y K I V I S - S F H L P Q H - L F P D D T R - - Y H S P S N I C H N I S F F R M I Q D S D I I V L . . . . . . 7641 AGTAGTTCCATCCATCTCCTCTGTCTCAAATTCAAATCTTTCTGAGTAAAGATATACTGT S S S I H L L C L K F K S F - V K I Y C V V P S I S S V S N S N L S E - R Y T V Q - F H P S P L S Q I Q I F L S K D I L . . . . . . 7581 AAACTACGATGATCCGTATAGACTTCACACTTAACCCCATATAGATAATGTCTCCATTGC K L R - S V - T S H L T P Y R - C L H C N Y D D P Y R L H T - P H I D N V S I A - T T M I R I D F T L N P I - I M S P L . . . . . . 7521 TTTAATGCAAACACTACCGCAGCCAACTCCAAATCATGGGTTGGATAATTACGTTCATGC F N A N T T A A N S K S W V G - L R S C L M Q T L P Q P T P N H G L D N Y V H A L - C K H Y R S Q L Q I M G W I I T F M . . 7461 ACCTTTAATTGC T F N C P L I H L - L Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-1_AGS-7_PPS_2 (8044 7805) (frame '0'; 237 bp, 79 residues) 1 TMSVCKNSVN QVIDAGYTYP SLNPQNTFLI DFCFFNLSSQ HLISDPDQFL IGKLLSFNLI 61 KKGRSCLHTD QKSSLLIYF- >C08HBa0294K15.1-_PGL-1_AGS-7_PPS_1 (8016 7777) (frame '1'; 237 bp, 79 residues) 1 IKSSTRGTRT LPLILKTPSS SIFASLTSPR NTLSRIQISF SSVNCFPLIL SRKEDLASTQ 61 TKNPPFSFTS SLIRSLSRV- >C08HBa0294K15.1-_PGL-1_AGS-7_PPS_3 (8314 8090) (frame '0'; 222 bp, 74 residues) 1 SVNNYPNGVI LTRCLWKTNH EVHCNSLPLP FRNGHSLKCP SRPLVFILYL QTIRALSNKI 61 NNVTLHPTSP KMLL- AGS-8 (8776 10405,10441 11134) SCR (e 0.801 d 0.000 a 0.000,e 0.785) Exon 1 8776 10405 (1630 n); score: 0.801 Intron 1 10406 10440 ( 35 n); Pd: 0.000 Pa: 0.000 Exon 2 10441 11134 ( 694 n); score: 0.785 PGS (8776 9442) SGN-U339540+ PGS (9096 9969) SGN-U339541+ PGS (9423 10131) SGN-U343842+ PGS (10000 10405,10441 10849) SGN-U335080- PGS (10483 11134) SGN-U315286+ PGS (10803 10955) SGN-U315283+ 3-phase translation of AGS-8 (+strand): . . . . . . 8776 AAAGTGAAATGCATTCAAGAAAAGCTTTTAGCGGCTCAAAGTAGACAAAAAGAATATGCA K V K C I Q E K L L A A Q S R Q K E Y A K - N A F K K S F - R L K V D K K N M Q S E M H S R K A F S G S K - T K R I C . . . . . . 8836 GATCGAAAGGTTAGAGACTTGGAGTTTATGGAGGGTGAGCAAGTTTTGCTGAAGGTTTCA D R K V R D L E F M E G E Q V L L K V S I E R L E T W S L W R V S K F C - R F H R S K G - R L G V Y G G - A S F A E G F . . . . . . 8896 CCCATGAAAGGGGTGATGCGGTTTGGTAAGCTTAGTCCGAGGTATATTGGTCCATTTGAA P M K G V M R F G K L S P R Y I G P F E P - K G - C G L V S L V R G I L V H L K T H E R G D A V W - A - S E V Y W S I - . . . . . . 8956 GTTCTGAAGCGCGTGGGGGAGGTAGCGTATGAATTAGCCTTGCCCCCAGGACTGTCAGGA V L K R V G E V A Y E L A L P P G L S G F - S A W G R - R M N - P C P Q D C Q D S S E A R G G G S V - I S L A P R T V R . . . . . . 9016 TTGCACCCGGTATTTCATGTGTCTATGTTGAAAAGATACCATGGGGATGGAAACTACATC L H P V F H V S M L K R Y H G D G N Y I C T R Y F M C L C - K D T M G M E T T S I A P G I S C V Y V E K I P W G W K L H . . . . . . 9076 ATTCGTTGGGATTCAGTTCTTCTTGATGAGAATTTGTCTTATGAGGAGGAGCCTGTTGCT I R W D S V L L D E N L S Y E E E P V A F V G I Q F F L M R I C L M R R S L L L H S L G F S S S - - E F V L - G G A C C . . . . . . 9136 ATCTTAGATAGAGAAGTACGCAAGCTGAGGTCAAGGGAGATTGCATCCATCAAGGTTCAA I L D R E V R K L R S R E I A S I K V Q S - I E K Y A S - G Q G R L H P S R F N Y L R - R S T Q A E V K G D C I H Q G S . . . . . . 9196 TGAAAGAATCGACCAATTGAAGAGTCCACTTGGGAGAAGGAGGCTGATATGCAAGAAAAA - K N R P I E E S T W E K E A D M Q E K E R I D Q L K S P L G R R R L I C K K N M K E S T N - R V H L G E G G - Y A R K . . . . . . 9256 TACCCACACCTGTTTACAGATTCAGGTACTCCTTTTCGCCCTTGTTTTTCTTCTTGTGAT Y P H L F T D S G T P F R P C F S S C D T H T C L Q I Q V L L F A L V F L L V I I P T P V Y R F R Y S F S P L F F F L - . . . . . . 9316 CGTTCAAGGACGAACGATGGGTAAATTGGTGTCTATTGTAACGACCTGTTAGTCGTTTTG R S R T N D G - I G V Y C N D L L V V L V Q G R T M G K L V S I V T T C - S F - S F K D E R W V N W C L L - R P V S R F . . . . . . 9376 AGCAGTAGAGTTTATTTCTGTTAATAACTGTCTGGGTCGATGGATACCACGACGGACCGT S S R V Y F C - - L S G S M D T T T D R A V E F I S V N N C L G R W I P R R T V E Q - S L F L L I T V W V D G Y H D G P . . . . . . 9436 CGAGGGGGTCTCGTTCCAAAACACTTAGTTTCTGAAAAATTGGGTACTGAGAACAACTCT R G G L V P K H L V S E K L G T E N N S E G V S F Q N T - F L K N W V L R T T L S R G S R S K T L S F - K I G Y - E Q L . . . . . . 9496 CTGAACTTCGCAATGGAAGAGCAGGACGGACCGTCGTAGGCACGACGGACCGTCACATGG L N F A M E E Q D G P S - A R R T V T W - T S Q W K S R T D R R R H D G P S H G S E L R N G R A G R T V V G T T D R H M . . . . . . 9556 TCTTAAATAAAAATTGAGTCTCTAAACTCTGTGACGACTTAGCAGGACGACCGTCGCAGG S - I K I E S L N S V T T - Q D D R R R L K - K L S L - T L - R L S R T T V A G V L N K N - V S K L C D D L A G R P S Q . . . . . . 9616 CACGAAGGACCGTCACAGACTGCGTAACCCTGACTGGGTCGGATTTCTGTTAAAAGTTTT H E G P S Q T A - P - L G R I S V K S F T K D R H R L R N P D W V G F L L K V F A R R T V T D C V T L T G S D F C - K F . . . . . . 9676 TAAGGGGTGTTTTGGATTATTCCTGCTTATGATTATAAAGTTAGTGGTTTAATGTTAATA - G V F W I I P A Y D Y K V S G L M L I K G C F G L F L L M I I K L V V - C - - L R G V L D Y S C L - L - S - W F N V N . . . . . . 9736 ATTCAATTTCTTGGGGGTTAAAGGAGACAACCTTGGAATAAGTAATGGGTTACTTTTAGC I Q F L G G - R R Q P W N K - W V T F S F N F L G V K G D N L G I S N G L L L A N S I S W G L K E T T L E - V M G Y F - . . . . . . 9796 ATCTTTTATACTTAATTATATGGTAATTAAGGTAAAACAAAGGGATTTTGAAAGAGGAGA I F Y T - L Y G N - G K T K G F - K R R S F I L N Y M V I K V K Q R D F E R G E H L L Y L I I W - L R - N K G I L K E E . . . . . . 9856 AAATTAAAAAAGAAAAAGAAAAAGAAGGGAGAACGAGCGAGAGGGAGAGAAGAACGAAGA K L K K K K K K K G E R A R G R E E R R N - K R K R K R R E N E R E G E K N E E K I K K E K E K E G R T S E R E R R T K . . . . . . 9916 GGAAAGCAAAGACCTTGAGGAGTAGCTTGCGTGATCACGAATTCTTCGGTGGAGGTAGGT G K Q R P - G V A C V I T N S S V E V G E S K D L E E - L A - S R I L R W R - V R K A K T L R S S L R D H E F F G G G R . . . . . . 9976 TATGGATTATGCTATAGTAAACTCTTAATAGCGAATGATATGTGTTGGGTAGTATTGTAA Y G L C Y S K L L I A N D M C W V V L - M D Y A I V N S - - R M I C V G - Y C K L W I M L - - T L N S E - Y V L G S I V . . . . . . 10036 AGTCTTCTATATGCTTAATTGTGTGCTTGCATGACGTGATTATATAATTGTGATAAAATA S L L Y A - L C A C M T - L Y N C D K I V F Y M L N C V L A - R D Y I I V I K - K S S I C L I V C L H D V I I - L - - N . . . . . . 10096 AGCATGATGAGGCTGTTGAATCTTAAACCTTAAAACCTCTTTGTTAATGATGATACCTTG S M M R L L N L K P - N L F V N D D T L A - - G C - I L N L K T S L L M M I P W K H D E A V E S - T L K P L C - - - Y L . . . . . . 10156 GTATAAAAGAAGGCTTGATGAACTGAAAGAATGAGAATTAGGGGATCGGAGTGTCACATT V - K K A - - T E R M R I R G S E C H I Y K R R L D E L K E - E L G D R S V T F G I K E G L M N - K N E N - G I G V S H . . . . . . 10216 CCGACACCAGGATAGTATGGATCGGGTGTCACGTTCCGACACCAGGATAGTATGGATCGG P T P G - Y G S G V T F R H Q D S M D R R H Q D S M D R V S R S D T R I V W I G S D T R I V W I G C H V P T P G - Y G S . . . . . . 10276 GTGTCACGTTCCGACACCAGGATAGTATGGATCGGGTGTCACGTTCGACACCAGGATAGT V S R S D T R I V W I G C H V R H Q D S C H V P T P G - Y G S G V T F D T R I V G V T F R H Q D S M D R V S R S T P G - . . . . . . 10336 ATGGATCGAGTATCACGTTCCGACACCAGGATAGTAGAGGATCAGAGTGTCACGTTCCGA M D R V S R S D T R I V E D Q S V T F R W I E Y H V P T P G - - R I R V S R S D Y G S S I T F R H Q D S R G S E C H V P . : . . . . . 10396 CACCAGGATA : GTAAAAAGAATGAATCTTGAATTATGCTAATATACTCAAATTTAATGAAC H Q D : S K K N E S - I M L I Y S N L M N T R I : V K R M N L E L C - Y T Q I - - T T P G - : - K E - I L N Y A N I L K F N E . . . . . . 10491 CTGTTTCCCAAATGAGTATGGTGTGGAGGCTTGAGTCCTCATAGATGTGCTTGGGTTGTG L F P K - V W C G G L S P H R C A W V V C F P N E Y G V E A - V L I D V L G L C P V S Q M S M V W R L E S S - M C L G C . . . . . . 10551 CCCAATGGTTATGGTACTTGTTGTTGTCACCTGTTGAGTATTGTAGTTGATTTTATGTTA P N G Y G T C C C H L L S I V V D F M L P M V M V L V V V T C - V L - L I L C Y A Q W L W Y L L L S P V E Y C S - F Y V . . . . . . 10611 TTATCTGATGTATATTGTTTTCTATTTTGAGTTGGCCGATGATACCTACTCAGTACTTGT L S D V Y C F L F - V G R - Y L L S T C Y L M Y I V F Y F E L A D D T Y S V L V I I - C I L F S I L S W P M I P T Q Y L . . . . . . 10671 GCCTTGTACTGACCCCTACTTGTATGTTTCTTTCTTTGTTATTTGTGGAGTGCAACAAAC A L Y - P L L V C F F L C Y L W S A T N P C T D P Y L Y V S F F V I C G V Q Q T C L V L T P T C M F L S L L F V E C N K . . . . . . 10731 GTGCCAACAACTTCGACTCAACCACAACTCTAGCCAGACTTCAGCATAATCAGATTTCAG V P T T S T Q P Q L - P D F S I I R F Q C Q Q L R L N H N S S Q T S A - S D F R R A N N F D S T T T L A R L Q H N Q I S . . . . . . 10791 GGTGAGCTATTGTTCCTAGCTCGGACTGGATTCTTTCTTTCAGGTCTTGATGTCTTGAAG G E L L F L A R T G F F L S G L D V L K V S Y C S - L G L D S F F Q V L M S - S G - A I V P S S D W I L S F R S - C L E . . . . . . 10851 TTCGGACATGGACCATCTCTTTTATTTATTTTAGCTTCTTAGATACTCTTAGATTTAGTA F G H G P S L L F I L A S - I L L D L V S D M D H L F Y L F - L L R Y S - I - - V R T W T I S F I Y F S F L D T L R F S . . . . . . 10911 ATTTGAGGATAGATGTTCTTGTGATGATGACTTCCAGATTTTGGGGATAATGATAAGTTC I - G - M F L - - - L P D F G D N D K F F E D R C S C D D D F Q I L G I M I S S N L R I D V L V M M T S R F W G - - - V . . . . . . 10971 TGAGTTTTAGAAGTTAATTATTGATTTCGTTAATGAGTTTTAAGTTTTCCGCATTATATT - V L E V N Y - F R - - V L S F P H Y I E F - K L I I D F V N E F - V F R I I F L S F R S - L L I S L M S F K F S A L Y . . . . . . 11031 CTGTTTAATATTGTTGAAATGTTGGGGTTTAGATTGGTTGGTTCTCTCACATAGGAGGGT L F N I V E M L G F R L V G S L T - E G C L I L L K C W G L D W L V L S H R R V S V - Y C - N V G V - I G W F S H I G G . . . . . 11091 AAGTGTGGGTGCCACTCACGGCTCGTTTTGGGTCGTGACAACTC K C G C H S R L V L G R D N S V G A T H G S F W V V T T - V W V P L T A R F G S - Q L Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-1_AGS-8_PPS_1 (8776 9198) (frame '1'; 420 bp, 140 residues) 1 KVKCIQEKLL AAQSRQKEYA DRKVRDLEFM EGEQVLLKVS PMKGVMRFGK LSPRYIGPFE 61 VLKRVGEVAY ELALPPGLSG LHPVFHVSML KRYHGDGNYI IRWDSVLLDE NLSYEEEPVA 121 ILDREVRKLR SREIASIKVQ - >C08HBa0294K15.1+_PGL-1_AGS-8_PPS_2 (10231 10405,10441 10460) (frame '1'; 192 bp, 64 residues) 1 YGSGVTFRHQ DSMDRVSRSD TRIVWIGCHV RHQDSMDRVS RSDTRIVEDQ SVTFRHQDSK 61 KNES- AGS-9 (10134 10830) SCR (e 0.734) Exon 1 10134 10830 ( 697 n); score: 0.734 PGS (10134 10830) SGN-U335078+ 3-phase translation of AGS-9 (+strand): . . . . . . 10134 CTTTGTTAATGATGATACCTTGGTATAAAAGAAGGCTTGATGAACTGAAAGAATGAGAAT L C - - - Y L G I K E G L M N - K N E N F V N D D T L V - K K A - - T E R M R I L L M M I P W Y K R R L D E L K E - E . . . . . . 10194 TAGGGGATCGGAGTGTCACATTCCGACACCAGGATAGTATGGATCGGGTGTCACGTTCCG - G I G V S H S D T R I V W I G C H V P R G S E C H I P T P G - Y G S G V T F R L G D R S V T F R H Q D S M D R V S R S . . . . . . 10254 ACACCAGGATAGTATGGATCGGGTGTCACGTTCCGACACCAGGATAGTATGGATCGGGTG T P G - Y G S G V T F R H Q D S M D R V H Q D S M D R V S R S D T R I V W I G C D T R I V W I G C H V P T P G - Y G S G . . . . . . 10314 TCACGTTCGACACCAGGATAGTATGGATCGAGTATCACGTTCCGACACCAGGATAGTAGA S R S T P G - Y G S S I T F R H Q D S R H V R H Q D S M D R V S R S D T R I V E V T F D T R I V W I E Y H V P T P G - - . . . . . . 10374 GGATCAGAGTGTCACGTTCCGACACCAGGATAGTATGGATCGGGTGTCACGTTTTGACAC G S E C H V P T P G - Y G S G V T F - H D Q S V T F R H Q D S M D R V S R F D T R I R V S R S D T R I V W I G C H V L T . . . . . . 10434 CAGGATAGTAAAAAGAATGAATCTTGAATTATGCTAATATACTCAAATTTAATGAACCTG Q D S K K N E S - I M L I Y S N L M N L R I V K R M N L E L C - Y T Q I - - T C P G - - K E - I L N Y A N I L K F N E P . . . . . . 10494 TTTCCCAAATGAGTATGGTGTGGAGGCTTGAGTCCTCATAGATGTGCTTGGGTTGTGCCC F P K - V W C G G L S P H R C A W V V P F P N E Y G V E A - V L I D V L G L C P V S Q M S M V W R L E S S - M C L G C A . . . . . . 10554 AATGGTTATGGTACTTGTTGTTGTCACCTGTTGAGTATTGTAGTTGATTTTATGTTATTA N G Y G T C C C H L L S I V V D F M L L M V M V L V V V T C - V L - L I L C Y Y Q W L W Y L L L S P V E Y C S - F Y V I . . . . . . 10614 TCTGATGTATATTGTTTTCTATTTTGAGTTGGCCGATGATACCTACTCAGTACTTGTGCC S D V Y C F L F - V G R - Y L L S T C A L M Y I V F Y F E L A D D T Y S V L V P I - C I L F S I L S W P M I P T Q Y L C . . . . . . 10674 TTGTACTGACCCCTACTTGTATGTTTCTTTCTTTGTTATTTGTGGAGTGCAACAAACGTG L Y - P L L V C F F L C Y L W S A T N V C T D P Y L Y V S F F V I C G V Q Q T C L V L T P T C M F L S L L F V E C N K R . . . . . . 10734 CCAACAACTTCGACTCAACCACAACTCTAGCCAGACTTCAGCATAATCAGATTTCAGGGT P T T S T Q P Q L - P D F S I I R F Q G Q Q L R L N H N S S Q T S A - S D F R V A N N F D S T T T L A R L Q H N Q I S G . . . . 10794 GAGCTATTGTTCCTAGCTCGGACTGGATTCTTTCTTT E L L F L A R T G F F L S Y C S - L G L D S F F - A I V P S S D W I L S Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-1_AGS-9_PPS_1 (10231 10470) (frame '2'; 237 bp, 79 residues) 1 YGSGVTFRHQ DSMDRVSRSD TRIVWIGCHV RHQDSMDRVS RSDTRIVEDQ SVTFRHQDSM 61 DRVSRFDTRI VKRMNLELC- 3-phase translation of AGS-9 (-strand): . . . . . . 10830 AAAGAAAGAATCCAGTCCGAGCTAGGAACAATAGCTCACCCTGAAATCTGATTATGCTGA K E R I Q S E L G T I A H P E I - L C - K K E S S P S - E Q - L T L K S D Y A E R K N P V R A R N N S S P - N L I M L . . . . . . 10770 AGTCTGGCTAGAGTTGTGGTTGAGTCGAAGTTGTTGGCACGTTTGTTGCACTCCACAAAT S L A R V V V E S K L L A R L L H S T N V W L E L W L S R S C W H V C C T P Q I K S G - S C G - V E V V G T F V A L H K . . . . . . 10710 AACAAAGAAAGAAACATACAAGTAGGGGTCAGTACAAGGCACAAGTACTGAGTAGGTATC N K E R N I Q V G V S T R H K Y - V G I T K K E T Y K - G S V Q G T S T E - V S - Q R K K H T S R G Q Y K A Q V L S R Y . . . . . . 10650 ATCGGCCAACTCAAAATAGAAAACAATATACATCAGATAATAACATAAAATCAACTACAA I G Q L K I E N N I H Q I I T - N Q L Q S A N S K - K T I Y I R - - H K I N Y N H R P T Q N R K Q Y T S D N N I K S T T . . . . . . 10590 TACTCAACAGGTGACAACAACAAGTACCATAACCATTGGGCACAACCCAAGCACATCTAT Y S T G D N N K Y H N H W A Q P K H I Y T Q Q V T T T S T I T I G H N P S T S M I L N R - Q Q Q V P - P L G T T Q A H L . . . . . . 10530 GAGGACTCAAGCCTCCACACCATACTCATTTGGGAAACAGGTTCATTAAATTTGAGTATA E D S S L H T I L I W E T G S L N L S I R T Q A S T P Y S F G K Q V H - I - V Y - G L K P P H H T H L G N R F I K F E Y . . . . . . 10470 TTAGCATAATTCAAGATTCATTCTTTTTACTATCCTGGTGTCAAAACGTGACACCCGATC L A - F K I H S F Y Y P G V K T - H P I - H N S R F I L F T I L V S K R D T R S I S I I Q D S F F L L S W C Q N V T P D . . . . . . 10410 CATACTATCCTGGTGTCGGAACGTGACACTCTGATCCTCTACTATCCTGGTGTCGGAACG H T I L V S E R D T L I L Y Y P G V G T I L S W C R N V T L - S S T I L V S E R P Y Y P G V G T - H S D P L L S W C R N . . . . . . 10350 TGATACTCGATCCATACTATCCTGGTGTCGAACGTGACACCCGATCCATACTATCCTGGT - Y S I H T I L V S N V T P D P Y Y P G D T R S I L S W C R T - H P I H T I L V V I L D P Y Y P G V E R D T R S I L S W . . . . . . 10290 GTCGGAACGTGACACCCGATCCATACTATCCTGGTGTCGGAACGTGACACCCGATCCATA V G T - H P I H T I L V S E R D T R S I S E R D T R S I L S W C R N V T P D P Y C R N V T P D P Y Y P G V G T - H P I H . . . . . . 10230 CTATCCTGGTGTCGGAATGTGACACTCCGATCCCCTAATTCTCATTCTTTCAGTTCATCA L S W C R N V T L R S P N S H S F S S S Y P G V G M - H S D P L I L I L S V H Q T I L V S E C D T P I P - F S F F Q F I . . . . 10170 AGCCTTCTTTTATACCAAGGTATCATCATTAACAAAG S L L L Y Q G I I I N K A F F Y T K V S S L T K K P S F I P R Y H H - Q Maximal non-overlapping open reading frames (>= 64 codons): none AGS-10 (10180 10302,10335 10966) SCR (e 0.760 d 0.000 a 0.000,e 0.769) Exon 1 10180 10302 ( 123 n); score: 0.760 Intron 1 10303 10334 ( 32 n); Pd: 0.000 Pa: 0.000 Exon 2 10335 10966 ( 632 n); score: 0.769 PGS (10180 10302,10335 10966) SGN-U335071- 3-phase translation of AGS-10 (+strand): . . . . . . 10180 GAAAGAATGAGAATTAGGGGATCGGAGTGTCACATTCCGACACCAGGATAGTATGGATCG E R M R I R G S E C H I P T P G - Y G S K E - E L G D R S V T F R H Q D S M D R K N E N - G I G V S H S D T R I V W I . . . . . . 10240 GGTGTCACGTTCCGACACCAGGATAGTATGGATCGGGTGTCACGTTCCGACACCAGGATA G V T F R H Q D S M D R V S R S D T R I V S R S D T R I V W I G C H V P T P G - G C H V P T P G - Y G S G V T F R H Q D . : . . . . . 10300 GTA : TATGGATCGAGTATCACGTTCCGACACCAGGATAGTAGAGGATCAGAGTGTCACGTT V : Y G S S I T F R H Q D S R G S E C H V Y : M D R V S R S D T R I V E D Q S V T F S : I W I E Y H V P T P G - - R I R V S R . . . . . . 10392 CCGACACCAGGATAGTATGGATCGGGTGTCACGTTTTGACACCAGGATAGTAAAAAGAAT P T P G - Y G S G V T F - H Q D S K K N R H Q D S M D R V S R F D T R I V K R M S D T R I V W I G C H V L T P G - - K E . . . . . . 10452 GAATCTTGAATTATGCTAATATACTCAAATTTAATGAACCTGTTTCCCAAATGAGTATGG E S - I M L I Y S N L M N L F P K - V W N L E L C - Y T Q I - - T C F P N E Y G - I L N Y A N I L K F N E P V S Q M S M . . . . . . 10512 TGTGGAGGCTTGAGTCCTCATAGATGTGCTTGGGTTGTGCCCAATGGTTATGGTACTTGT C G G L S P H R C A W V V P N G Y G T C V E A - V L I D V L G L C P M V M V L V V W R L E S S - M C L G C A Q W L W Y L . . . . . . 10572 TGTTGTCACCTGTTGAGTATTGTAGTTGATTTTATGTTATTATCTGATGTATATTGTTTT C C H L L S I V V D F M L L S D V Y C F V V T C - V L - L I L C Y Y L M Y I V F L L S P V E Y C S - F Y V I I - C I L F . . . . . . 10632 CTATTTTGAGTTGGCCGATGATACCTACTCAGTACTTGTGCCTTGTACTGACCCCTACTT L F - V G R - Y L L S T C A L Y - P L L Y F E L A D D T Y S V L V P C T D P Y L S I L S W P M I P T Q Y L C L V L T P T . . . . . . 10692 GTATGTTTCTTTCTTTGTTATTTGTGGAGTGCAACAAACGTGCCAACAACTTCGACTCAA V C F F L C Y L W S A T N V P T T S T Q Y V S F F V I C G V Q Q T C Q Q L R L N C M F L S L L F V E C N K R A N N F D S . . . . . . 10752 CCACAACTCTAGCCAGACTTCAGCATAATCAGATTTCAGGGTGAGCTATTGTTCCTAGCT P Q L - P D F S I I R F Q G E L L F L A H N S S Q T S A - S D F R V S Y C S - L T T T L A R L Q H N Q I S G - A I V P S . . . . . . 10812 CGGACTGGATTCTTTCTTTCAGGTCTTGATGTCTTGAAGTTCGGACATGGACCATCTCTT R T G F F L S G L D V L K F G H G P S L G L D S F F Q V L M S - S S D M D H L F S D W I L S F R S - C L E V R T W T I S . . . . . . 10872 TTATTTATTTTAGCTTCTTAGATACTCTTAGATTTAGTAATTTGAGGATAGATGTTCTTG L F I L A S - I L L D L V I - G - M F L Y L F - L L R Y S - I - - F E D R C S C F I Y F S F L D T L R F S N L R I D V L . . . . 10932 TGATGATGACTTCCAGATTTTGGGGATAATGATAA - - - L P D F G D N D D D D F Q I L G I M I V M M T S R F W G - - - Maximal non-overlapping open reading frames (>= 64 codons): none PGL 2 (+ strand): 20912 21384 AGS-1 (20912 21366) SCR (e 0.882) Exon 1 20912 21366 ( 455 n); score: 0.882 PGS (20912 21202) SGN-U334483+ PGS (20919 21366) SGN-U313612+ PGS (20919 21332) SGN-U313614- 3-phase translation of AGS-1 (+strand): . . . . . . 20912 TTGTTAGGACCGGAAATAAGAAGGTGTAAACGCGGAAGCTAGCAAAGCAAACCTCAAAAG L L G P E I R R C K R G S - Q S K P Q K C - D R K - E G V N A E A S K A N L K R V R T G N K K V - T R K L A K Q T S K . . . . . . 20972 ACCACGAGTAAGAATAAACGAGAAATATATCAAAAGACACAAAGATTTAACGTGATTCGG T T S K N K R E I Y Q K T Q R F N V I R P R V R I N E K Y I K R H K D L T - F G D H E - E - T R N I S K D T K I - R D S . . . . . . 21032 TCAATCGACCTACGTCCACAAAGGAGATGAGCAATCCACTATAAATATGAGAGTACAAAA S I D L R P Q R R - A I H Y K Y E S T K Q S T Y V H K G D E Q S T I N M R V Q N V N R P T S T K E M S N P L - I - E Y K . . . . . . 21092 TACAGAGAAAAACAACCTCAATCAATTCACTCGAAATACATGCGAGGTTCACAAGTGATA Y R E K Q P Q S I H S K Y M R G S Q V I T E K N N L N Q F T R N T C E V H K - - I Q R K T T S I N S L E I H A R F T S D . . . . . . 21152 ACATATCAAGCTTGTAACCCATAAATTCTCCACCTAACCAAAACTCTCAAAGCATTTAAG T Y Q A C N P - I L H L T K T L K A F K H I K L V T H K F S T - P K L S K H L R N I S S L - P I N S P P N Q N S Q S I - . . . . . . 21212 ACTACATTGTGAATGCTGATTAAGTTAGAAGAAACATGCCTCTATTTATAGAGTCCTAAA T T L - M L I K L E E T C L Y L - S P K L H C E C - L S - K K H A S I Y R V L N D Y I V N A D - V R R N M P L F I E S - . . . . . . 21272 CTTTTTCCTACCAGAAAAATATTAGTCATTCCAAAACTTTTTCCTAAAAGGAAAACCTAT L F P T R K I L V I P K L F P K R K T Y F F L P E K Y - S F Q N F F L K G K P I T F S Y Q K N I S H S K T F S - K E N L . . . . 21332 TTATGGTAAGAAATTTAGGGCAAATAATATCCAAC L W - E I - G K - Y P Y G K K F R A N N I Q F M V R N L G Q I I S N Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (-strand): . . . . . . 21366 GTTGGATATTATTTGCCCTAAATTTCTTACCATAAATAGGTTTTCCTTTTAGGAAAAAGT V G Y Y L P - I S Y H K - V F L L G K S L D I I C P K F L T I N R F S F - E K V W I L F A L N F L P - I G F P F R K K . . . . . . 21306 TTTGGAATGACTAATATTTTTCTGGTAGGAAAAAGTTTAGGACTCTATAAATAGAGGCAT F G M T N I F L V G K S L G L Y K - R H L E - L I F F W - E K V - D S I N R G M F W N D - Y F S G R K K F R T L - I E A . . . . . . 21246 GTTTCTTCTAACTTAATCAGCATTCACAATGTAGTCTTAAATGCTTTGAGAGTTTTGGTT V S S N L I S I H N V V L N A L R V L V F L L T - S A F T M - S - M L - E F W L C F F - L N Q H S Q C S L K C F E S F G . . . . . . 21186 AGGTGGAGAATTTATGGGTTACAAGCTTGATATGTTATCACTTGTGAACCTCGCATGTAT R W R I Y G L Q A - Y V I T C E P R M Y G G E F M G Y K L D M L S L V N L A C I - V E N L W V T S L I C Y H L - T S H V . . . . . . 21126 TTCGAGTGAATTGATTGAGGTTGTTTTTCTCTGTATTTTGTACTCTCATATTTATAGTGG F E - I D - G C F S L Y F V L S Y L - W S S E L I E V V F L C I L Y S H I Y S G F R V N - L R L F F S V F C T L I F I V . . . . . . 21066 ATTGCTCATCTCCTTTGTGGACGTAGGTCGATTGACCGAATCACGTTAAATCTTTGTGTC I A H L L C G R R S I D R I T L N L C V L L I S F V D V G R L T E S R - I F V S D C S S P L W T - V D - P N H V K S L C . . . . . . 21006 TTTTGATATATTTCTCGTTTATTCTTACTCGTGGTCTTTTGAGGTTTGCTTTGCTAGCTT F - Y I S R L F L L V V F - G L L C - L F D I F L V Y S Y S W S F E V C F A S F L L I Y F S F I L T R G L L R F A L L A . . . . 20946 CCGCGTTTACACCTTCTTATTTCCGGTCCTAACAA P R L H L L I S G P N R V Y T F L F P V L T S A F T P S Y F R S - Q Maximal non-overlapping open reading frames (>= 64 codons): none AGS-2 (20924 21137,21272 21384) SCR (e 0.890 d 0.699 a 0.000,e 0.810) Exon 1 20924 21137 ( 214 n); score: 0.890 Intron 1 21138 21271 ( 134 n); Pd: 0.699 Pa: 0.000 Exon 2 21272 21384 ( 113 n); score: 0.810 PGS (20924 21137,21272 21384) SGN-U313613- 3-phase translation of AGS-2 (+strand): . . . . . . 20924 GAAATAAGAAGGTGTAAACGCGGAAGCTAGCAAAGCAAACCTCAAAAGACCACGAGTAAG E I R R C K R G S - Q S K P Q K T T S K K - E G V N A E A S K A N L K R P R V R N K K V - T R K L A K Q T S K D H E - . . . . . . 20984 AATAAACGAGAAATATATCAAAAGACACAAAGATTTAACGTGATTCGGTCAATCGACCTA N K R E I Y Q K T Q R F N V I R S I D L I N E K Y I K R H K D L T - F G Q S T Y E - T R N I S K D T K I - R D S V N R P . . . . . . 21044 CGTCCACAAAGGAGATGAGCAATCCACTATAAATATGAGAGTACAAAATACAGAGAAAAA R P Q R R - A I H Y K Y E S T K Y R E K V H K G D E Q S T I N M R V Q N T E K N T S T K E M S N P L - I - E Y K I Q R K . . . . : . . 21104 CAACCTCAATCAATTCACTCGAAATACATGCGAG : CTTTTTCCTACCAGAAAAATATTAGT Q P Q S I H S K Y M R : A F S Y Q K N I S N L N Q F T R N T C E : L F P T R K I L V T T S I N S L E I H A S : F F L P E K Y - . . . . . . 21298 CATTCCAAAACTTTTTCCTAAAAGGAAAACCTATTTATGGTAAGAAATTTAGGGCAAATA H S K T F S - K E N L F M V R N L G Q I I P K L F P K R K T Y L W - E I - G K - S F Q N F F L K G K P I Y G K K F R A N . . . 21358 ATATCCAACCTACATTACTGAATTTAT I S N L H Y - I Y Y P T Y I T E F N I Q P T L L N L Maximal non-overlapping open reading frames (>= 64 codons): none PGL 3 (- strand): 27801 26419 AGS-1 (27801 26419) SCR (e 0.754) Exon 1 27801 26419 (1383 n); score: 0.754 PGS (27801 26419) SGN-U315924+ 3-phase translation of AGS-1 (-strand): . . . . . . 27801 TATTGTTGACTGAGATTAGGTTTAGACTTTGTTTACTGGGCTTCGGCCCACTGTGATTAT Y C - L R L G L D F V Y W A S A H C D Y I V D - D - V - T L F T G L R P T V I I L L T E I R F R L C L L G F G P L - L . . . . . . 27741 ATAACTATATATATCTCGTTGTGCTAATGGAAAACCCAAGCAGTTGAATTTATCTCTTTC I T I Y I S L C - W K T Q A V E F I S F - L Y I S R C A N G K P K Q L N L S L S Y N Y I Y L V V L M E N P S S - I Y L F . . . . . . 27681 ACTAAATTCTACATGGTATCAGAGCCTCGACCGGGAATCTAACCCTAGCCGAGAGCCGAC T K F Y M V S E P R P G I - P - P R A D L N S T W Y Q S L D R E S N P S R E P T H - I L H G I R A S T G N L T L A E S R . . . . . . 27621 CATTTCCGCTACCGACGTACGATCTCCTGATCGTCGCCGCCGTCTTGCACGCCGAAGCCT H F R Y R R T I S - S S P P S C T P K P I S A T D V R S P D R R R R L A R R S L P F P L P T Y D L L I V A A V L H A E A . . . . . . 27561 CCGAACGGCCGATCGCCACAGCCCCCACGAGACGTCATGACTGCCGAGTCCACTCAATCC P N G R S P Q P P R D V M T A E S T Q S R T A D R H S P H E T S - L P S P L N P S E R P I A T A P T R R H D C R V H S I . . . . . . 27501 AGCACTGTTTCCATCACTGTTTCCACGGTGATTGCTGCGACTGTCCGACCGATCCATGAT S T V S I T V S T V I A A T V R P I H D A L F P S L F P R - L L R L S D R S M I Q H C F H H C F H G D C C D C P T D P - . . . . . . 27441 CCGAGCTCCGTCTATTATCTACACCCGTCAGAAGGTCCGAGTAATTCTCTCACTAAATAC P S S V Y Y L H P S E G P S N S L T K Y R A P S I I Y T R Q K V R V I L S L N T S E L R L L S T P V R R S E - F S H - I . . . . . . 27381 CTACTGAAGGGAGATAATTTTGACGTTTGGGAGCAAGCGATTTGTAATGCGCTTGAAGGT L L K G D N F D V W E Q A I C N A L E G Y - R E I I L T F G S K R F V M R L K V P T E G R - F - R L G A S D L - C A - R . . . . . . 27321 AGAAGCAAGATTGGTTTTCTATATGAAAAGGGTTTTCCAAAGCCGACGAACGTTTTGGAA R S K I G F L Y E K G F P K P T N V L E E A R L V F Y M K R V F Q S R R T F W N - K Q D W F S I - K G F S K A D E R F G . . . . . . 27261 CTTGATGCCTGGAAAGCGAACAATTCCATCATTTGTTCGTGGATTTTTAACAGCGCCGAC L D A W K A N N S I I C S W I F N S A D L M P G K R T I P S F V R G F L T A P T T - C L E S E Q F H H L F V D F - Q R R . . . . . . 27201 GAGACGATCCAGCCGAGTCTCGTCGCTCAAAAAATTGCCCACGAATTGTGGACCGATATG E T I Q P S L V A Q K I A H E L W T D M R R S S R V S S L K K L P T N C G P I - R D D P A E S R R S K N C P R I V D R Y . . . . . . 27141 AAGGCACGATATGGAGGCACGAATGCTCCTAAATCGTGGCAGTTAAAGTCTGACCTACAA K A R Y G G T N A P K S W Q L K S D L Q R H D M E A R M L L N R G S - S L T Y K E G T I W R H E C S - I V A V K V - P T . . . . . . 27081 ATGTTGAGGCAAAAAGGTCAGTCTGTAGTCTCGTACTACAATCAGTTCATCATTGTCTGG M L R Q K G Q S V V S Y Y N Q F I I V W C - G K K V S L - S R T T I S S S L S G N V E A K R S V C S L V L Q S V H H C L . . . . . . 27021 AACCAATTGTATGGTTCGATTGATCCAACTTGCGGGTGTATATGTCCTGCGGCTGCAAAA N Q L Y G S I D P T C G C I C P A A A K T N C M V R L I Q L A G V Y V L R L Q K E P I V W F D - S N L R V Y M S C G C K . . . . . . 26961 ATGCGTCTTCGATTTGAGGAGGAGAAGACGCAGGCGTTTCTCCTCGGGCTTGATGATGCT M R L R F E E E K T Q A F L L G L D D A C V F D L R R R R R R R F S S G L M M L N A S S I - G G E D A G V S P R A - - C . . . . . . 26901 CAGTTCGGGGCGACTCGCTCTCAGATCTTCGGCACCCGCCCACTTCCTGTTCTCAACGAA Q F G A T R S Q I F G T R P L P V L N E S S G R L A L R S S A P A H F L F S T K S V R G D S L S D L R H P P T S C S Q R . . . . . . 26841 GCCTACTATCTTGTCTCTTAGGAGGAGAGATACAAGTCGATTGTGCGTAACTGTGATGAC A Y Y L V S - E E R Y K S I V R N C D D P T I L S L R R R D T S R L C V T V M T S L L S C L L G G E I Q V D C A - L - - . . . . . . 26781 CGAACCGATGGGTTGACATTCGCGGTTGAAACTCAACCCACACCACCCCCGAAATACAAG R T D G L T F A V E T Q P T P P P K Y K E P M G - H S R L K L N P H H P R N T S P N R W V D I R G - N S T H T T P E I Q . . . . . . 26721 TGCACCCATTGCGGGAAAACTGGTCACTCTGCCGAACGGTGTTTTCTTTTGGTCGGTTTT C T H C G K T G H S A E R C F L L V G F A P I A G K L V T L P N G V F F W S V F V H P L R E N W S L C R T V F S F G R F . . . . . . 26661 CCCAATGGAGGAAGAGGGGGTTGTGTGGGCGGACGCGGGGGTCGAGGAGGTCGTGGCCCA P N G G R G G C V G G R G G R G G R G P P M E E E G V V W A D A G V E E V V A H S Q W R K R G L C G R T R G S R R S W P . . . . . . 26601 CCTGGCCGTGAGCAGTCCACAAGTCGCGATAGCGGCACGGCTGCACACACCGACGGTCCA P G R E Q S T S R D S G T A A H T D G P L A V S S P Q V A I A A R L H T P T V Q T W P - A V H K S R - R H G C T H R R S . . . . . . 26541 ACGCCCGTACCAGCATCGACGTCCGGCAGCAGCCAAAGCGGGGTCCTTTTCGGGCTGTCG T P V P A S T S G S S Q S G V L F G L S R P Y Q H R R P A A A K A G S F S G C R N A R T S I D V R Q Q P K R G P F R A V . . . . . . 26481 GCCGAGCAGATGACCCGACTATTGATTATGCTCGACACTCCTGCACAATCAGGCAATAAC A E Q M T R L L I M L D T P A Q S G N N P S R - P D Y - L C S T L L H N Q A I T G R A D D P T I D Y A R H S C T I R Q - . 26421 ACG T H Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-3_AGS-1_PPS_1 (27591 26821) (frame '1'; 768 bp, 256 residues) 1 SSPPSCTPKP PNGRSPQPPR DVMTAESTQS STVSITVSTV IAATVRPIHD PSSVYYLHPS 61 EGPSNSLTKY LLKGDNFDVW EQAICNALEG RSKIGFLYEK GFPKPTNVLE LDAWKANNSI 121 ICSWIFNSAD ETIQPSLVAQ KIAHELWTDM KARYGGTNAP KSWQLKSDLQ MLRQKGQSVV 181 SYYNQFIIVW NQLYGSIDPT CGCICPAAAK MRLRFEEEKT QAFLLGLDDA QFGATRSQIF 241 GTRPLPVLNE AYYLVS- >C08HBa0294K15.1-_PGL-3_AGS-1_PPS_2 (26820 26419) (frame '1'; 402 bp, 134 residues) 1 EERYKSIVRN CDDRTDGLTF AVETQPTPPP KYKCTHCGKT GHSAERCFLL VGFPNGGRGG 61 CVGGRGGRGG RGPPGREQST SRDSGTAAHT DGPTPVPAST SGSSQSGVLF GLSAEQMTRL 121 LIMLDTPAQS GNNT 3-phase translation of AGS-1 (+strand): . . . . . . 26419 CGTGTTATTGCCTGATTGTGCAGGAGTGTCGAGCATAATCAATAGTCGGGTCATCTGCTC R V I A - L C R S V E H N Q - S G H L L V L L P D C A G V S S I I N S R V I C S C Y C L I V Q E C R A - S I V G S S A . . . . . . 26479 GGCCGACAGCCCGAAAAGGACCCCGCTTTGGCTGCTGCCGGACGTCGATGCTGGTACGGG G R Q P E K D P A L A A A G R R C W Y G A D S P K R T P L W L L P D V D A G T G R P T A R K G P R F G C C R T S M L V R . . . . . . 26539 CGTTGGACCGTCGGTGTGTGCAGCCGTGCCGCTATCGCGACTTGTGGACTGCTCACGGCC R W T V G V C S R A A I A T C G L L T A V G P S V C A A V P L S R L V D C S R P A L D R R C V Q P C R Y R D L W T A H G . . . . . . 26599 AGGTGGGCCACGACCTCCTCGACCCCCGCGTCCGCCCACACAACCCCCTCTTCCTCCATT R W A T T S S T P A S A H T T P S S S I G G P R P P R P P R P P T Q P P L P P L Q V G H D L L D P R V R P H N P L F L H . . . . . . 26659 GGGAAAACCGACCAAAAGAAAACACCGTTCGGCAGAGTGACCAGTTTTCCCGCAATGGGT G K T D Q K K T P F G R V T S F P A M G G K P T K R K H R S A E - P V F P Q W V W E N R P K E N T V R Q S D Q F S R N G . . . . . . 26719 GCACTTGTATTTCGGGGGTGGTGTGGGTTGAGTTTCAACCGCGAATGTCAACCCATCGGT A L V F R G W C G L S F N R E C Q P I G H L Y F G G G V G - V S T A N V N P S V C T C I S G V V W V E F Q P R M S T H R . . . . . . 26779 TCGGTCATCACAGTTACGCACAATCGACTTGTATCTCTCCTCCTAAGAGACAAGATAGTA S V I T V T H N R L V S L L L R D K I V R S S Q L R T I D L Y L S S - E T R - - F G H H S Y A Q S T C I S P P K R Q D S . . . . . . 26839 GGCTTCGTTGAGAACAGGAAGTGGGCGGGTGCCGAAGATCTGAGAGCGAGTCGCCCCGAA G F V E N R K W A G A E D L R A S R P E A S L R T G S G R V P K I - E R V A P N R L R - E Q E V G G C R R S E S E S P R . . . . . . 26899 CTGAGCATCATCAAGCCCGAGGAGAAACGCCTGCGTCTTCTCCTCCTCAAATCGAAGACG L S I I K P E E K R L R L L L L K S K T - A S S S P R R N A C V F S S S N R R R T E H H Q A R G E T P A S S P P Q I E D . . . . . . 26959 CATTTTTGCAGCCGCAGGACATATACACCCGCAAGTTGGATCAATCGAACCATACAATTG H F C S R R T Y T P A S W I N R T I Q L I F A A A G H I H P Q V G S I E P Y N W A F L Q P Q D I Y T R K L D Q S N H T I . . . . . . 27019 GTTCCAGACAATGATGAACTGATTGTAGTACGAGACTACAGACTGACCTTTTTGCCTCAA V P D N D E L I V V R D Y R L T F L P Q F Q T M M N - L - Y E T T D - P F C L N G S R Q - - T D C S T R L Q T D L F A S . . . . . . 27079 CATTTGTAGGTCAGACTTTAACTGCCACGATTTAGGAGCATTCGTGCCTCCATATCGTGC H L - V R L - L P R F R S I R A S I S C I C R S D F N C H D L G A F V P P Y R A T F V G Q T L T A T I - E H S C L H I V . . . . . . 27139 CTTCATATCGGTCCACAATTCGTGGGCAATTTTTTGAGCGACGAGACTCGGCTGGATCGT L H I G P Q F V G N F L S D E T R L D R F I S V H N S W A I F - A T R L G W I V P S Y R S T I R G Q F F E R R D S A G S . . . . . . 27199 CTCGTCGGCGCTGTTAAAAATCCACGAACAAATGATGGAATTGTTCGCTTTCCAGGCATC L V G A V K N P R T N D G I V R F P G I S S A L L K I H E Q M M E L F A F Q A S S R R R C - K S T N K - W N C S L S R H . . . . . . 27259 AAGTTCCAAAACGTTCGTCGGCTTTGGAAAACCCTTTTCATATAGAAAACCAATCTTGCT K F Q N V R R L W K T L F I - K T N L A S S K T F V G F G K P F S Y R K P I L L Q V P K R S S A L E N P F H I E N Q S C . . . . . . 27319 TCTACCTTCAAGCGCATTACAAATCGCTTGCTCCCAAACGTCAAAATTATCTCCCTTCAG S T F K R I T N R L L P N V K I I S L Q L P S S A L Q I A C S Q T S K L S P F S F Y L Q A H Y K S L A P K R Q N Y L P S . . . . . . 27379 TAGGTATTTAGTGAGAGAATTACTCGGACCTTCTGACGGGTGTAGATAATAGACGGAGCT - V F S E R I T R T F - R V - I I D G A R Y L V R E L L G P S D G C R - - T E L V G I - - E N Y S D L L T G V D N R R S . . . . . . 27439 CGGATCATGGATCGGTCGGACAGTCGCAGCAATCACCGTGGAAACAGTGATGGAAACAGT R I M D R S D S R S N H R G N S D G N S G S W I G R T V A A I T V E T V M E T V S D H G S V G Q S Q Q S P W K Q - W K Q . . . . . . 27499 GCTGGATTGAGTGGACTCGGCAGTCATGACGTCTCGTGGGGGCTGTGGCGATCGGCCGTT A G L S G L G S H D V S W G L W R S A V L D - V D S A V M T S R G G C G D R P F C W I E W T R Q S - R L V G A V A I G R . . . . . . 27559 CGGAGGCTTCGGCGTGCAAGACGGCGGCGACGATCAGGAGATCGTACGTCGGTAGCGGAA R R L R R A R R R R R S G D R T S V A E G G F G V Q D G G D D Q E I V R R - R K S E A S A C K T A A T I R R S Y V G S G . . . . . . 27619 ATGGTCGGCTCTCGGCTAGGGTTAGATTCCCGGTCGAGGCTCTGATACCATGTAGAATTT M V G S R L G L D S R S R L - Y H V E F W S A L G - G - I P G R G S D T M - N L N G R L S A R V R F P V E A L I P C R I . . . . . . 27679 AGTGAAAGAGATAAATTCAACTGCTTGGGTTTTCCATTAGCACAACGAGATATATATAGT S E R D K F N C L G F P L A Q R D I Y S V K E I N S T A W V F H - H N E I Y I V - - K R - I Q L L G F S I S T T R Y I - . . . . . . 27739 TATATAATCACAGTGGGCCGAAGCCCAGTAAACAAAGTCTAAACCTAATCTCAGTCAACA Y I I T V G R S P V N K V - T - S Q S T I - S Q W A E A Q - T K S K P N L S Q Q L Y N H S G P K P S K Q S L N L I S V N . 27799 ATA I N Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-3_AGS-1_PPS_1 (26464 27087) (frame '1'; 621 bp, 207 residues) 1 SGHLLGRQPE KDPALAAAGR RCWYGRWTVG VCSRAAIATC GLLTARWATT SSTPASAHTT 61 PSSSIGKTDQ KKTPFGRVTS FPAMGALVFR GWCGLSFNRE CQPIGSVITV THNRLVSLLL 121 RDKIVGFVEN RKWAGAEDLR ASRPELSIIK PEEKRLRLLL LKSKTHFCSR RTYTPASWIN 181 RTIQLVPDND ELIVVRDYRL TFLPQHL- >C08HBa0294K15.1+_PGL-3_AGS-1_PPS_2 (27176 27427) (frame '2'; 249 bp, 83 residues) 1 ATRLGWIVSS ALLKIHEQMM ELFAFQASSS KTFVGFGKPF SYRKPILLLP SSALQIACSQ 61 TSKLSPFSRY LVRELLGPSD GCR- >C08HBa0294K15.1+_PGL-3_AGS-1_PPS_3 (27424 27663) (frame '1'; 237 bp, 79 residues) 1 IIDGARIMDR SDSRSNHRGN SDGNSAGLSG LGSHDVSWGL WRSAVRRLRR ARRRRRSGDR 61 TSVAEMVGSR LGLDSRSRL- PGL 4 (- strand): 29496 28805 AGS-1 (29221 29162,29009 28934,28884 28805) SCR (e 0.767 d 0.000 a 0.000,e 0.895 d 0.782 a 0.000,e 0.925) Exon 1 29221 29162 ( 60 n); score: 0.767 Intron 1 29161 29010 ( 152 n); Pd: 0.000 Pa: 0.000 Exon 2 29009 28934 ( 76 n); score: 0.895 Intron 2 28933 28885 ( 49 n); Pd: 0.782 Pa: 0.000 Exon 3 28884 28805 ( 80 n); score: 0.925 PGS (29221 29162,29009 28934,28884 28805) SGN-U335137+ 3-phase translation of AGS-1 (-strand): . . . . . . : 29221 ATTTTACTTCAAATATTGCAGAGAAAAAGGCCAAAAAATTATACAATTGTGAATTATACA : I L L Q I L Q R K R P K N Y T I V N Y T : F Y F K Y C R E K G Q K I I Q L - I I Q : F T S N I A E K K A K K L Y N C E L Y : . . . . . . 29009 GCAAAGCTAATTATACAATTGCGGCGAAATAGGCCAGCGAATTATACAATTTAAGCCAGC A K L I I Q L R R N R P A N Y T I - A S Q S - L Y N C G E I G Q R I I Q F K P A S K A N Y T I A A K - A S E L Y N L S Q . . : . . . . 28949 GAATTATACAATTTAG : TGTTTGCTATGGAGCGCAATTATGCAAAGTTTGCTATATTATAC E L Y N L : V F A M E R N Y A K F A I L Y N Y T I - : C L L W S A I M Q S L L Y Y T R I I Q F S : V C Y G A Q L C K V C Y I I . . . . 28840 AAATATGATTTTTTTGTTTGCTATATGTGAAAGTTG K Y D F F V C Y M - K L N M I F L F A I C E S Q I - F F C L L Y V K V Maximal non-overlapping open reading frames (>= 64 codons): none AGS-2 (29496 28956) SCR (e 0.864) Exon 1 29496 28956 ( 541 n); score: 0.864 PGS (29496 28956) SGN-U315404- 3-phase translation of AGS-2 (-strand): . . . . . . 29496 GGAAAATTGTATAAAATAGCAAATTAATAACCTAAATTAAATTGAATAGCTAGGGTTTGA G K L Y K I A N - - P K L N - I A R V - E N C I K - Q I N N L N - I E - L G F D K I V - N S K L I T - I K L N S - G L . . . . . . 29436 TTTAATTGTGCTCCATAGCAAACATTGACAAAAAATTGCCAGGCGTCTCTCTCCCAGAAG F N C A P - Q T L T K N C Q A S L S Q K L I V L H S K H - Q K I A R R L S P R S I - L C S I A N I D K K L P G V S L P E . . . . . . 29376 TCTCGCTCGCCACTCTCCCATTCTCGCCTCTCTCGCTTTATACACAAAAGTGTATAATTT S R S P L S H S R L S R F I H K S V - F L A R H S P I L A S L A L Y T K V Y N F V S L A T L P F S P L S L Y T Q K C I I . . . . . . 29316 CTGTTTCTGTTTTGTATAAAGCGAGAGAAAATTGTATTTACACATGCAAAAATGTATATC L F L F C I K R E K I V F T H A K M Y I C F C F V - S E R K L Y L H M Q K C I S S V S V L Y K A R E N C I Y T C K N V Y . . . . . . 29256 TTCGTGTTATACACTTAATTATATAATTTACAAACATTTTACTTCAAATATTGCAGAGAA F V L Y T - L Y N L Q T F Y F K Y C R E S C Y T L N Y I I Y K H F T S N I A E K L R V I H L I I - F T N I L L Q I L Q R . . . . . . 29196 AAAGGCCAAAAAATTATACAATTGTGAATTATACAATTGCAGTGAAATACAATTTTTTCT K G Q K I I Q L - I I Q L Q - N T I F S K A K K L Y N C E L Y N C S E I Q F F L K R P K N Y T I V N Y T I A V K Y N F F . . . . . . 29136 AGTTTTATACAACAGAAGTGTATATATTGTGTTTCTGTTTTTGTATAAAGCGACAAAAAC S F I Q Q K C I Y C V S V F V - S D K N V L Y N R S V Y I V F L F L Y K A T K T - F Y T T E V Y I L C F C F C I K R Q K . . . . . . 29076 ATATATCTTCTTGCTATACACTTATAATTATGCAATATACATACATTTTAATTCGATTCA I Y L L A I H L - L C N I H T F - F D S Y I F L L Y T Y N Y A I Y I H F N S I Q H I S S C Y T L I I M Q Y T Y I L I R F . . . . . . 29016 ACTGTATGCAAAGCTAATTATACAATTGCGGCGAAATAGGCCAGCGAATTATACAATTTA T V C K A N Y T I A A K - A S E L Y N L L Y A K L I I Q L R R N R P A N Y T I - N C M Q S - L Y N C G E I G Q R I I Q F . 28956 A Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-4_AGS-2_PPS_1 (29297 28956) (frame '2'; 339 bp, 113 residues) 1 SERKLYLHMQ KCISSCYTLN YIIYKHFTSN IAEKKAKKLY NCELYNCSEI QFFLVLYNRS 61 VYIVFLFLYK ATKTYIFLLY TYNYAIYIHF NSIQLYAKLI IQLRRNRPAN YTI- 3-phase translation of AGS-2 (+strand): . . . . . . 28956 TTAAATTGTATAATTCGCTGGCCTATTTCGCCGCAATTGTATAATTAGCTTTGCATACAG L N C I I R W P I S P Q L Y N - L C I Q - I V - F A G L F R R N C I I S F A Y S K L Y N S L A Y F A A I V - L A L H T . . . . . . 29016 TTGAATCGAATTAAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAAGATATA L N R I K M Y V Y C I I I S V - Q E D I - I E L K C M Y I A - L - V Y S K K I Y V E S N - N V C I L H N Y K C I A R R Y . . . . . . 29076 TGTTTTTGTCGCTTTATACAAAAACAGAAACACAATATATACACTTCTGTTGTATAAAAC C F C R F I Q K Q K H N I Y T S V V - N V F V A L Y K N R N T I Y T L L L Y K T M F L S L Y T K T E T Q Y I H F C C I K . . . . . . 29136 TAGAAAAAATTGTATTTCACTGCAATTGTATAATTCACAATTGTATAATTTTTTGGCCTT - K K L Y F T A I V - F T I V - F F G L R K N C I S L Q L Y N S Q L Y N F L A F L E K I V F H C N C I I H N C I I F W P . . . . . . 29196 TTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTATATAATTAAGTGTATAACACGA F L C N I - S K M F V N Y I I K C I T R F S A I F E V K C L - I I - L S V - H E F S L Q Y L K - N V C K L Y N - V Y N T . . . . . . 29256 AGATATACATTTTTGCATGTGTAAATACAATTTTCTCTCGCTTTATACAAAACAGAAACA R Y T F L H V - I Q F S L A L Y K T E T D I H F C M C K Y N F L S L Y T K Q K Q K I Y I F A C V N T I F S R F I Q N R N . . . . . . 29316 GAAATTATACACTTTTGTGTATAAAGCGAGAGAGGCGAGAATGGGAGAGTGGCGAGCGAG E I I H F C V - S E R G E N G R V A S E K L Y T F V Y K A R E A R M G E W R A R R N Y T L L C I K R E R R E W E S G E R . . . . . . 29376 ACTTCTGGGAGAGAGACGCCTGGCAATTTTTTGTCAATGTTTGCTATGGAGCACAATTAA T S G R E T P G N F L S M F A M E H N - L L G E R R L A I F C Q C L L W S T I K D F W E R D A W Q F F V N V C Y G A Q L . . . . . . 29436 ATCAAACCCTAGCTATTCAATTTAATTTAGGTTATTAATTTGCTATTTTATACAATTTTC I K P - L F N L I - V I N L L F Y T I F S N P S Y S I - F R L L I C Y F I Q F S N Q T L A I Q F N L G Y - F A I L Y N F . 29496 C Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-4_AGS-2_PPS_1 (29243 29473) (frame '0'; 228 bp, 76 residues) 1 VYNTKIYIFA CVNTIFSRFI QNRNRNYTLL CIKRERREWE SGERDFWERD AWQFFVNVCY 61 GAQLNQTLAI QFNLGY- >C08HBa0294K15.1+_PGL-4_AGS-2_PPS_2 (29251 29460) (frame '2'; 207 bp, 69 residues) 1 HEDIHFCMCK YNFLSLYTKQ KQKLYTFVYK AREARMGEWR ARLLGERRLA IFCQCLLWST 61 IKSNPSYSI- PGL 5 (+ strand): 30382 31329 AGS-1 (30382 31329) SCR (e 0.987) Exon 1 30382 31329 ( 948 n); score: 0.987 PGS (30382 31329) SGN-U329379+ 3-phase translation of AGS-1 (+strand): . . . . . . 30382 CAACAAAAGGATTCACAACCAAAGTGGGAAGCAAAAGTCTCAACAACATTACACAAGGCA Q Q K D S Q P K W E A K V S T T L H K A N K R I H N Q S G K Q K S Q Q H Y T R Q T K G F T T K V G S K S L N N I T Q G . . . . . . 30442 AGTGCAGACCAAATATTTTCTCTTTTCAAAGATTTTTTTGGGCTAAACAAATGGTTTCCC S A D Q I F S L F K D F F G L N K W F P V Q T K Y F L F S K I F L G - T N G F P K C R P N I F S F Q R F F W A K Q M V S . . . . . . 30502 AGCTTGTCAACATGTTATGGCATCCACGGCGAAAATGGCGAGGCCGGTTGCATACGATAC S L S T C Y G I H G E N G E A G C I R Y A C Q H V M A S T A K M A R P V A Y D T Q L V N M L W H P R R K W R G R L H T I . . . . . . 30562 TGTACCGGATTCTCTCTCCCTCCGGAGAGAGGTGGTGGTGCCACCGGAGAAGCCCCGGTG C T G F S L P P E R G G G A T G E A P V V P D S L S L R R E V V V P P E K P R - L Y R I L S P S G E R W W C H R R S P G . . . . . . 30622 AGCGGTTGGTCTAAGGAGAGGTTGGTGGCTATTGATCCAACGGAGAGGATATTAAGTTAT S G W S K E R L V A I D P T E R I L S Y A V G L R R G W W L L I Q R R G Y - V M E R L V - G E V G G Y - S N G E D I K L . . . . . . 30682 GAGATGGTGGATTGTAACATTGGGTTTAAGTCATACTTTTCAACGGTCAAGATTGTTCCA E M V D C N I G F K S Y F S T V K I V P R W W I V T L G L S H T F Q R S R L F Q - D G G L - H W V - V I L F N G Q D C S . . . . . . 30742 AATGGAGTTGATGGATGTGTGATTGAGTGGTTTATCACCGTTGATCCAGTTGAAGGGATG N G V D G C V I E W F I T V D P V E G M M E L M D V - L S G L S P L I Q L K G - K W S - W M C D - V V Y H R - S S - R D . . . . . . 30802 AGATTGGAGGATTTGGTCAACAAGTATGATGTTGGCCTGCAAGGAATGGCTAAGAACATG R L E D L V N K Y D V G L Q G M A K N M D W R I W S T S M M L A C K E W L R T C E I G G F G Q Q V - C W P A R N G - E H . . . . . . 30862 CAAAATGCCCTAACAAGTTCATAAGTTTTTTTTAATTTTGGGGGGATTTTATGTTTATTA Q N A L T S S - V F F N F G G I L C L L K M P - Q V H K F F L I L G G F Y V Y Y A K C P N K F I S F F - F W G D F M F I . . . . . . 30922 TTTCCTATGTCATATATTAATGATATGAATTCTACTTAATTAATATTTCTTCCCTGAATT F P M S Y I N D M N S T - L I F L P - I F L C H I L M I - I L L N - Y F F P E L I S Y V I Y - - Y E F Y L I N I S S L N . . . . . . 30982 AACTCAATATTAATAAATTGAGGGTATAATAAGAAAATAAGTATCGTCATTTTTTAATTT N S I L I N - G Y N K K I S I V I F - F T Q Y - - I E G I I R K - V S S F F N L - L N I N K L R V - - E N K Y R H F L I . . . . . . 31042 ATCAATAAATTAAAAAAGTAGAAATGGTGTAGAAGTAGATTCAAATTGTGTGGATACAAT I N K L K K - K W C R S R F K L C G Y N S I N - K S R N G V E V D S N C V D T I Y Q - I K K V E M V - K - I Q I V W I Q . . . . . . 31102 AATTTATGCTTTGCAGGACTTGCTTTCATATAATTTTATTTGCACTTTCTACAAAGCATT N L C F A G L A F I - F Y L H F L Q S I I Y A L Q D L L S Y N F I C T F Y K A L - F M L C R T C F H I I L F A L S T K H . . . . . . 31162 GAATCATTGTACATGATCTATTCCTAGTCGAATCTTTTATATTGAGAACCCATACATATG E S L Y M I Y S - S N L L Y - E P I H M N H C T - S I P S R I F Y I E N P Y I - - I I V H D L F L V E S F I L R T H T Y . . . . . . 31222 AAATGATATAAAACTCCAACATTTTTATCAGAGAAGTAGCTCCAAGAGACACAAATAAAT K - Y K T P T F L S E K - L Q E T Q I N N D I K L Q H F Y Q R S S S K R H K - I E M I - N S N I F I R E V A P R D T N K . . . . . 31282 ATTACTTCTGATGAAAACGTATGTTTGAAAAAAAAAATCACTTTTAAA I T S D E N V C L K K K I T F K L L L M K T Y V - K K K S L L Y Y F - - K R M F E K K N H F - Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-5_AGS-1_PPS_1 (30382 30885) (frame '1'; 501 bp, 167 residues) 1 QQKDSQPKWE AKVSTTLHKA SADQIFSLFK DFFGLNKWFP SLSTCYGIHG ENGEAGCIRY 61 CTGFSLPPER GGGATGEAPV SGWSKERLVA IDPTERILSY EMVDCNIGFK SYFSTVKIVP 121 NGVDGCVIEW FITVDPVEGM RLEDLVNKYD VGLQGMAKNM QNALTSS- 3-phase translation of AGS-1 (-strand): . . . . . . 31329 TTTAAAAGTGATTTTTTTTTTCAAACATACGTTTTCATCAGAAGTAATATTTATTTGTGT F K S D F F F Q T Y V F I R S N I Y L C L K V I F F F K H T F S S E V I F I C V - K - F F F S N I R F H Q K - Y L F V . . . . . . 31269 CTCTTGGAGCTACTTCTCTGATAAAAATGTTGGAGTTTTATATCATTTCATATGTATGGG L L E L L L - - K C W S F I S F H M Y G S W S Y F S D K N V G V L Y H F I C M G S L G A T S L I K M L E F Y I I S Y V W . . . . . . 31209 TTCTCAATATAAAAGATTCGACTAGGAATAGATCATGTACAATGATTCAATGCTTTGTAG F S I - K I R L G I D H V Q - F N A L - S Q Y K R F D - E - I M Y N D S M L C R V L N I K D S T R N R S C T M I Q C F V . . . . . . 31149 AAAGTGCAAATAAAATTATATGAAAGCAAGTCCTGCAAAGCATAAATTATTGTATCCACA K V Q I K L Y E S K S C K A - I I V S T K C K - N Y M K A S P A K H K L L Y P H E S A N K I I - K Q V L Q S I N Y C I H . . . . . . 31089 CAATTTGAATCTACTTCTACACCATTTCTACTTTTTTAATTTATTGATAAATTAAAAAAT Q F E S T S T P F L L F - F I D K L K N N L N L L L H H F Y F F N L L I N - K M T I - I Y F Y T I S T F L I Y - - I K K . . . . . . 31029 GACGATACTTATTTTCTTATTATACCCTCAATTTATTAATATTGAGTTAATTCAGGGAAG D D T Y F L I I P S I Y - Y - V N S G K T I L I F L L Y P Q F I N I E L I Q G R - R Y L F S Y Y T L N L L I L S - F R E . . . . . . 30969 AAATATTAATTAAGTAGAATTCATATCATTAATATATGACATAGGAAATAATAAACATAA K Y - L S R I H I I N I - H R K - - T - N I N - V E F I S L I Y D I G N N K H K E I L I K - N S Y H - Y M T - E I I N I . . . . . . 30909 AATCCCCCCAAAATTAAAAAAAACTTATGAACTTGTTAGGGCATTTTGCATGTTCTTAGC N P P K I K K N L - T C - G I L H V L S I P P K L K K T Y E L V R A F C M F L A K S P Q N - K K L M N L L G H F A C S - . . . . . . 30849 CATTCCTTGCAGGCCAACATCATACTTGTTGACCAAATCCTCCAATCTCATCCCTTCAAC H S L Q A N I I L V D Q I L Q S H P F N I P C R P T S Y L L T K S S N L I P S T P F L A G Q H H T C - P N P P I S S L Q . . . . . . 30789 TGGATCAACGGTGATAAACCACTCAATCACACATCCATCAACTCCATTTGGAACAATCTT W I N G D K P L N H T S I N S I W N N L G S T V I N H S I T H P S T P F G T I L L D Q R - - T T Q S H I H Q L H L E Q S . . . . . . 30729 GACCGTTGAAAAGTATGACTTAAACCCAATGTTACAATCCACCATCTCATAACTTAATAT D R - K V - L K P N V T I H H L I T - Y T V E K Y D L N P M L Q S T I S - L N I - P L K S M T - T Q C Y N P P S H N L I . . . . . . 30669 CCTCTCCGTTGGATCAATAGCCACCAACCTCTCCTTAGACCAACCGCTCACCGGGGCTTC P L R W I N S H Q P L L R P T A H R G F L S V G S I A T N L S L D Q P L T G A S S S P L D Q - P P T S P - T N R S P G L . . . . . . 30609 TCCGGTGGCACCACCACCTCTCTCCGGAGGGAGAGAGAATCCGGTACAGTATCGTATGCA S G G T T T S L R R E R E S G T V S Y A P V A P P P L S G G R E N P V Q Y R M Q L R W H H H L S P E G E R I R Y S I V C . . . . . . 30549 ACCGGCCTCGCCATTTTCGCCGTGGATGCCATAACATGTTGACAAGCTGGGAAACCATTT T G L A I F A V D A I T C - Q A G K P F P A S P F S P W M P - H V D K L G N H L N R P R H F R R G C H N M L T S W E T I . . . . . . 30489 GTTTAGCCCAAAAAAATCTTTGAAAAGAGAAAATATTTGGTCTGCACTTGCCTTGTGTAA V - P K K I F E K R K Y L V C T C L V - F S P K K S L K R E N I W S A L A L C N C L A Q K N L - K E K I F G L H L P C V . . . . . 30429 TGTTGTTGAGACTTTTGCTTCCCACTTTGGTTGTGAATCCTTTTGTTG C C - D F C F P L W L - I L L L V V E T F A S H F G C E S F C M L L R L L L P T L V V N P F V Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-5_AGS-1_PPS_1 (30956 30678) (frame '2'; 276 bp, 92 residues) 1 VEFISLIYDI GNNKHKIPPK LKKTYELVRA FCMFLAIPCR PTSYLLTKSS NLIPSTGSTV 61 INHSITHPST PFGTILTVEK YDLNPMLQST IS- PGL 6 (- strand): 46905 42211 AGS-1 (42883 42211) SCR (e 0.940) Exon 1 42883 42211 ( 673 n); score: 0.940 PGS (42883 42211) SGN-U342929- 3-phase translation of AGS-1 (-strand): . . . . . . 42883 TTCAACTAGAAAGAATCGATCTGAATTAGTCATGATTCATACAAAAAGTTGTAAGCCAAA F N - K E S I - I S H D S Y K K L - A K S T R K N R S E L V M I H T K S C K P K Q L E R I D L N - S - F I Q K V V S Q . . . . . . 42823 AATATCTCTTTTTGTATGAGATATTATTTTTAGAAGGAATTGAAAATATCACATAAATTA N I S F C M R Y Y F - K E L K I S H K L I S L F V - D I I F R R N - K Y H I N - K Y L F L Y E I L F L E G I E N I T - I . . . . . . 42763 ATTGAAATAGCGGAAGAAGCAATCAAAAACTAGTTTCCCTGCTTATTAATTAGAACACAC I E I A E E A I K N - F P C L L I R T H L K - R K K Q S K T S F P A Y - L E H T N - N S G R S N Q K L V S L L I N - N T . . . . . . 42703 AAAATCACCTAGCTTAGACGATTCTAGAGCTTTCTCAATATTTTCAGCCATGCCTTGGAG K I T - L R R F - S F L N I F S H A L E K S P S L D D S R A F S I F S A M P W R Q N H L A - T I L E L S Q Y F Q P C L G . . . . . . 42643 GGATGAGTTAATATAACCCGAAAATAATTCCAAAGTCAACCCATCAATCGGATCAGCAAC G - V N I T R K - F Q S Q P I N R I S N D E L I - P E N N S K V N P S I G S A T G M S - Y N P K I I P K S T H Q S D Q Q . . . . . . 42583 GAACAACCACTCGATCTGGCACCCGCCCTCATCCAATGACAACACTTTCAACGTAGATAC E Q P L D L A P A L I Q - Q H F Q R R Y N N H S I W H P P S S N D N T F N V D T R T T T R S G T R P H P M T T L S T - I . . . . . . 42523 ATAATACTTGATCCCGATATTGTTATCTAAGACCTCATAGCTGATACATCGCTCTATCTT I I L D P D I V I - D L I A D T S L Y L - Y L I P I L L S K T S - L I H R S I L H N T - S R Y C Y L R P H S - Y I A L S . . . . . . 42463 ATCAATCGTCAGCAACTTCTCGTGACACCACTTGATGATCGCTTCCCCATCGCCTGACGA I N R Q Q L L V T P L D D R F P I A - R S I V S N F S - H H L M I A S P S P D D Y Q S S A T S R D T T - - S L P H R L T . . . . . . 42403 TAGGGGCGTGGTGCTAGCGCAGTAGCGGATAATTTCATCTTTATTATCACTATCAATTTG - G R G A S A V A D N F I F I I T I N L R G V V L A Q - R I I S S L L S L S I W I G A W C - R S S G - F H L Y Y H Y Q F . . . . . . 42343 GTGACAAGTGTCAATGTTTGGTAGCCATTTGTGGAAGTTGAAGAAATCTTCAAGGAGTGG V T S V N V W - P F V E V E E I F K E W - Q V S M F G S H L W K L K K S S R S G G D K C Q C L V A I C G S - R N L Q G V . . . . . . 42283 CCATACTTGTTCAGCTTTGGCATGTTTTAGATTGACTATAAATTTGCCTTCCCATTTGGA P Y L F S F G M F - I D Y K F A F P F G H T C S A L A C F R L T I N L P S H L D A I L V Q L W H V L D - L - I C L P I W . . 42223 CTCAAGTTGTTGG L K L L S S C W T Q V V Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (+strand): . . . . . . 42211 CCAACAACTTGAGTCCAAATGGGAAGGCAAATTTATAGTCAATCTAAAACATGCCAAAGC P T T - V Q M G R Q I Y S Q S K T C Q S Q Q L E S K W E G K F I V N L K H A K A N N L S P N G K A N L - S I - N M P K . . . . . . 42271 TGAACAAGTATGGCCACTCCTTGAAGATTTCTTCAACTTCCACAAATGGCTACCAAACAT - T S M A T P - R F L Q L P Q M A T K H E Q V W P L L E D F F N F H K W L P N I L N K Y G H S L K I S S T S T N G Y Q T . . . . . . 42331 TGACACTTGTCACCAAATTGATAGTGATAATAAAGATGAAATTATCCGCTACTGCGCTAG - H L S P N - - - - - R - N Y P L L R - D T C H Q I D S D N K D E I I R Y C A S L T L V T K L I V I I K M K L S A T A L . . . . . . 42391 CACCACGCCCCTATCGTCAGGCGATGGGGAAGCGATCATCAAGTGGTGTCACGAGAAGTT H H A P I V R R W G S D H Q V V S R E V T T P L S S G D G E A I I K W C H E K L A P R P Y R Q A M G K R S S S G V T R S . . . . . . 42451 GCTGACGATTGATAAGATAGAGCGATGTATCAGCTATGAGGTCTTAGATAACAATATCGG A D D - - D R A M Y Q L - G L R - Q Y R L T I D K I E R C I S Y E V L D N N I G C - R L I R - S D V S A M R S - I T I S . . . . . . 42511 GATCAAGTATTATGTATCTACGTTGAAAGTGTTGTCATTGGATGAGGGCGGGTGCCAGAT D Q V L C I Y V E S V V I G - G R V P D I K Y Y V S T L K V L S L D E G G C Q I G S S I M Y L R - K C C H W M R A G A R . . . . . . 42571 CGAGTGGTTGTTCGTTGCTGATCCGATTGATGGGTTGACTTTGGAATTATTTTCGGGTTA R V V V R C - S D - W V D F G I I F G L E W L F V A D P I D G L T L E L F S G Y S S G C S L L I R L M G - L W N Y F R V . . . . . . 42631 TATTAACTCATCCCTCCAAGGCATGGCTGAAAATATTGAGAAAGCTCTAGAATCGTCTAA Y - L I P P R H G - K Y - E S S R I V - I N S S L Q G M A E N I E K A L E S S K I L T H P S K A W L K I L R K L - N R L . . . . . . 42691 GCTAGGTGATTTTGTGTGTTCTAATTAATAAGCAGGGAAACTAGTTTTTGATTGCTTCTT A R - F C V F - L I S R E T S F - L L L L G D F V C S N - - A G K L V F D C F F S - V I L C V L I N K Q G N - F L I A S . . . . . . 42751 CCGCTATTTCAATTAATTTATGTGATATTTTCAATTCCTTCTAAAAATAATATCTCATAC P L F Q L I Y V I F S I P S K N N I S Y R Y F N - F M - Y F Q F L L K I I S H T S A I S I N L C D I F N S F - K - Y L I . . . . . . 42811 AAAAAGAGATATTTTTGGCTTACAACTTTTTGTATGAATCATGACTAATTCAGATCGATT K K R Y F W L T T F C M N H D - F R S I K R D I F G L Q L F V - I M T N S D R F Q K E I F L A Y N F L Y E S - L I Q I D . . 42871 CTTTCTAGTTGAA L S S - F L V E S F - L Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-6_AGS-1_PPS_1 (42212 42718) (frame '2'; 504 bp, 168 residues) 1 QQLESKWEGK FIVNLKHAKA EQVWPLLEDF FNFHKWLPNI DTCHQIDSDN KDEIIRYCAS 61 TTPLSSGDGE AIIKWCHEKL LTIDKIERCI SYEVLDNNIG IKYYVSTLKV LSLDEGGCQI 121 EWLFVADPID GLTLELFSGY INSSLQGMAE NIEKALESSK LGDFVCSN- AGS-2 (46905 46425,45118 45080,44892 44822,44295 44231,44007 43918,43836 43744,43639 43169) SCR (e 0.995 d 0.988 a 0.995,e 1.000 d 0.955 a 0.957,e 1.000 d 0.951 a 0.993,e 1.000 d 0.991 a 0.993,e 1.000 d 0.783 a 0.982,e 1.000 d 0.954 a 0.998,e 1.000) Exon 1 46905 46425 ( 481 n); score: 0.995 Intron 1 46424 45119 (1306 n); Pd: 0.988 Pa: 0.995 Exon 2 45118 45080 ( 39 n); score: 1.000 Intron 2 45079 44893 ( 187 n); Pd: 0.955 Pa: 0.957 Exon 3 44892 44822 ( 71 n); score: 1.000 Intron 3 44821 44296 ( 526 n); Pd: 0.951 Pa: 0.993 Exon 4 44295 44231 ( 65 n); score: 1.000 Intron 4 44230 44008 ( 223 n); Pd: 0.991 Pa: 0.993 Exon 5 44007 43918 ( 90 n); score: 1.000 Intron 5 43917 43837 ( 81 n); Pd: 0.783 Pa: 0.982 Exon 6 43836 43744 ( 93 n); score: 1.000 Intron 6 43743 43640 ( 104 n); Pd: 0.954 Pa: 0.998 Exon 7 43639 43169 ( 471 n); score: 1.000 PGS (46905 46425,45118 45080,44892 44822,44295 44231,44007 43918,43836 43744,43639 43169) SGN-U321315+ 3-phase translation of AGS-2 (-strand): . . . . . . 46905 AAAAACCCCATTCACAAAAGCTTCATTCTTCAATTTTCACATAATTTTTTTTTCTTCATT K N P I H K S F I L Q F S H N F F F F I K T P F T K A S F F N F H I I F F S S F K P H S Q K L H S S I F T - F F F L H . . . . . . 46845 TGATGGAATCTTCGTTGCCGGTGGAGGAGCTTACTTCCGGCGCAAGTGGTCGGATAATTC - W N L R C R W R S L L P A Q V V G - F D G I F V A G G G A Y F R R K W S D N S L M E S S L P V E E L T S G A S G R I I . . . . . . 46785 CTCTTTTCAAAAATCTTCACCGGTCAGTTTTCTCATACCAAACTTACCGGAGACTAATTA L F S K I F T G Q F S H T K L T G D - L S F Q K S S P V S F L I P N L P E T N Y P L F K N L H R S V F S Y Q T Y R R L I . . . . . . 46725 TATTTATACAGTCTATTTTCCTATGGGTAATTCTTCTGTCTCGACGGAGGTTCTCCACGT Y L Y S L F S Y G - F F C L D G G S P R I Y T V Y F P M G N S S V S T E V L H V I F I Q S I F L W V I L L S R R R F S T . . . . . . 46665 CACCTTCGTCTCCTCCGCCTTCGCCATCTGCAGCTACTACGGCGGTGTTGGGGAAGAGGA H L R L L R L R H L Q L L R R C W G R G T F V S S A F A I C S Y Y G G V G E E E S P S S P P P S P S A A T T A V L G K R . . . . . . 46605 GGAAATTTGCTTTGCGGAGGGATGAAGAGGATACGCAGAGAAGGAGGGCTCTTGCTGAGG G N L L C G G M K R I R R E G G L L L R E I C F A E G - R G Y A E K E G S C - G R K F A L R R D E E D T Q R R R A L A E . . . . . . 46545 CGTTAGATATGACGGTTGAGAATGACGGTGTGAGCTGCCGTTGGAATACGTCTTTGTTCT R - I - R L R M T V - A A V G I R L C S V R Y D G - E - R C E L P L E Y V F V L A L D M T V E N D G V S C R W N T S L F . . . . . . 46485 TTGGGGCTCGTCGGAATGCTTTGTTTTGCCGATCGTGGTTTCCGGTTACAGATGAATTGA L G L V G M L C F A D R G F R L Q M N - W G S S E C F V L P I V V S G Y R - I E F G A R R N A L F C R S W F P V T D E L . : . . . : . . 46425 G : GGGCATAATTATCATCATCCATGGACTGAATGAGCACAG : TGGACGATATGCTCATTTTG : G A - L S S S M D - M S T : V D D M L I L : G H N Y H H P W T E - A Q : W T I C S F C R : G I I I I I H G L N E H S : G R Y A H F . . . . . . : 44872 CTAGGCAACTGAACTCCTGCAACTTTGGGGTGTATGCAATGGACTGGATAG : GTCATGGAG L G N - T P A T L G C M Q W T G - : V M E - A T E L L Q L W G V C N G L D R : S W R A R Q L N S C N F G V Y A M D W I : G H G . . . . . . : 44286 GGAGTGATGGATTACATGGATACGTGCCATCTTTGGACCATGTTGTGGCAGACACA : GGGG G V M D Y M D T C H L W T M L W Q T Q : G E - W I T W I R A I F G P C C G R H : R G G S D G L H G Y V P S L D H V V A D T : G . . . . . . 44003 CTTTCTTGGAAAAGGTCAAGTTTGACAACCCTGGTATACCATGCTTCCTCTTTGGTCATT L S W K R S S L T T L V Y H A S S L V I F L G K G Q V - Q P W Y T M L P L W S F A F L E K V K F D N P G I P C F L F G H . . . : . . . 43943 CAACGGGAGGAGCGGTGGTCTTAAAG : GCAGCTTCTTATCCACATATTGAAAACATGGTGG Q R E E R W S - R : Q L L I H I L K T W W N G R S G G L K : G S F L S T Y - K H G G S T G G A V V L K : A A S Y P H I E N M V . . . . . . : 43802 AGGGCATCATATTGACTTCACCAGCATTGCGTGTGAAACCTGCAAATCCTATTGTTAGT : G R A S Y - L H Q H C V - N L Q I L L L V : G H H I D F T S I A C E T C K S Y C - : C E G I I L T S P A L R V K P A N P I V S : . . . . . . 43638 CTGTGGCACCAATTTTTTCATTGGTTGCACCTAGGTACCAGTTCAAAGGTTCTCACAAAA L W H Q F F H W L H L G T S S K V L T K C G T N F F I G C T - V P V Q R F S Q K A V A P I F S L V A P R Y Q F K G S H K . . . . . . 43578 GGGGAATCCCTGTTTCAAGGGATCCTGCCGCACTGGTGGCTAAGTATTCTGACCCTCTAG G E S L F Q G I L P H W W L S I L T L - G N P C F K G S C R T G G - V F - P S S R G I P V S R D P A A L V A K Y S D P L . . . . . . 43518 TGTATACTGGGCCTTTGAGGGTGAGGACAGGGCATGAGATTCTGCGTATCTCGTCTTACT C I L G L - G - G Q G M R F C V S R L T V Y W A F E G E D R A - D S A Y L V L L V Y T G P L R V R T G H E I L R I S S Y . . . . . . 43458 TGATGCGGAACTTCAAGTCAGTCACTGTCCCATTCTTAGTCCTCCATGGATCTGCTGATA - C G T S S Q S L S H S - S S M D L L I D A E L Q V S H C P I L S P P W I C - - L M R N F K S V T V P F L V L H G S A D . . . . . . 43398 GAGTGACTGATCCATTGGCTTCTCAAGATTTGTACAATGAGGCTGCTTCTGAATTCAAAG E - L I H W L L K I C T M R L L L N S K S D - S I G F S R F V Q - G C F - I Q R R V T D P L A S Q D L Y N E A A S E F K . . . . . . 43338 ACATTAAACTTTATGATGGATTCTTGCACGATCTTCTATTTGAGCCTGAGCGTGAAGAAA T L N F M M D S C T I F Y L S L S V K K H - T L - W I L A R S S I - A - A - R N D I K L Y D G F L H D L L F E P E R E E . . . . . . 43278 TTGCCCAGGATATCATTGATTGGATGCACAAGAAGTTAGATTCTGGCAATCTTGCAAATG L P R I S L I G C T R S - I L A I L Q M C P G Y H - L D A Q E V R F W Q S C K C I A Q D I I D W M H K K L D S G N L A N . . . . . 43218 TGTATAGTCAGTGCTAGTTTTCTAAATCATTAGTGTTTTGATTGATCAAA C I V S A S F L N H - C F D - S V - S V L V F - I I S V L I D Q V Y S Q C - F S K S L V F - L I K Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-6_AGS-2_PPS_1 (46861 46425,45118 45080,44892 44822,44295 44231,44007 43918,43836 43744,43639 43202) (frame '0'; 1230 bp, 410 residues) 1 FFFLHLMESS LPVEELTSGA SGRIIPLFKN LHRSVFSYQT YRRLIIFIQS IFLWVILLSR 61 RRFSTSPSSP PPSPSAATTA VLGKRRKFAL RRDEEDTQRR RALAEALDMT VENDGVSCRW 121 NTSLFFGARR NALFCRSWFP VTDELRGIII IIHGLNEHSG RYAHFARQLN SCNFGVYAMD 181 WIGHGGSDGL HGYVPSLDHV VADTGAFLEK VKFDNPGIPC FLFGHSTGGA VVLKAASYPH 241 IENMVEGIIL TSPALRVKPA NPIVSAVAPI FSLVAPRYQF KGSHKRGIPV SRDPAALVAK 301 YSDPLVYTGP LRVRTGHEIL RISSYLMRNF KSVTVPFLVL HGSADRVTDP LASQDLYNEA 361 ASEFKDIKLY DGFLHDLLFE PEREEIAQDI IDWMHKKLDS GNLANVYSQC - PGL 7 (+ strand): 55852 57760 AGS-1 (55852 55921,55955 57029) SCR (e 0.786 d 0.000 a 0.000,e 0.663) Exon 1 55852 55921 ( 70 n); score: 0.786 Intron 1 55922 55954 ( 33 n); Pd: 0.000 Pa: 0.000 Exon 2 55955 57029 (1075 n); score: 0.663 PGS (55852 55921,55955 56418) SGN-U339541+ PGS (55936 56638) SGN-U335319+ PGS (55936 56585) SGN-U343842+ PGS (56190 57029) SGN-U315287+ PGS (56377 57029) SGN-U335077+ 3-phase translation of AGS-1 (+strand): . . . . . . 55852 TGTAACGACCTGTTAGTCGTTTTGAGCAGTAGAGTTTATTCTGGTAATAGCTGTCTGGGT C N D L L V V L S S R V Y S G N S C L G V T T C - S F - A V E F I L V I A V W V - R P V S R F E Q - S L F W - - L S G . : . . . . . 55912 CGACGGATCC : CACGACGGACCGTCGAGGGGGTCTCGTTCCAAAACACTTAGATTCTAAAA R R I : P R R T V E G V S F Q N T - I L K D G S : H D G P S R G S R S K T L R F - K S T D P : T T D R R G G L V P K H L D S K . . . . . . 56005 ATTTGGGTAATGAGAACAACTCTCTGAACTTCGCGACGACATGGCAGGACGGACCGTCGT I W V M R T T L - T S R R H G R T D R R F G - - E Q L S E L R D D M A G R T V V N L G N E N N S L N F A T T W Q D G P S . . . . . . 56065 GGGCACGACGGACCGTCACAGACCCTTTAATGAAATTCAGTCTCTGAACTTTGTGACGGA G H D G P S Q T L - - N S V S E L C D G G T T D R H R P F N E I Q S L N F V T E W A R R T V T D P L M K F S L - T L - R . . . . . . 56125 AGCAGCAGGACGGACCGTCATAGGCACGACGGGCCGTCACAGGCTGCGTAACCTTGACTG S S R T D R H R H D G P S Q A A - P - L A A G R T V I G T T G R H R L R N L D W K Q Q D G P S - A R R A V T G C V T L T . . . . . . 56185 GGTCAGATTTCTGTTAAATGTTTTAAGGGGCGTTTTGGACTATTTCTGCTTATAATTATA G Q I S V K C F K G R F G L F L L I I I V R F L L N V L R G V L D Y F C L - L - G S D F C - M F - G A F W T I S A Y N Y . . . . . . 56245 AAGTTAGTGGGTTAATGTTAATAATTCAATTACTTGGGGGTTAAAGGTGATAACCTTGAA K L V G - C - - F N Y L G V K G D N L E S - W V N V N N S I T W G L K V I T L K K V S G L M L I I Q L L G G - R - - P - . . . . . . 56305 ATAAATAGTGGGTTACTTTTACCATCTTTTATACTTAATTATATGGTAATTAGGGTAAAA I N S G L L L P S F I L N Y M V I R V K - I V G Y F Y H L L Y L I I W - L G - K N K - W V T F T I F Y T - L Y G N - G K . . . . . . 56365 GAAAAAGAGTTTGAATAAGGAAAAATAGAAAGAACAAAAGAGAGGGACGAACGAGCGAGA E K E F E - G K I E R T K E R D E R A R K K S L N K E K - K E Q K R G T N E R E R K R V - I R K N R K N K R E G R T S E . . . . . . 56425 GAAGAGAGAATGAAGAGGAAAGCAAAGACCTTGAGGAGTAGCTTGCGTGATCACGAATTC E E R M K R K A K T L R S S L R D H E F K R E - R G K Q R P - G V A C V I T N S R R E N E E E S K D L E E - L A - S R I . . . . . . 56485 TTCGGTGGAGGTAGGTTATGGTTTATGCTATTTCATAGTAAACTCTTAATAGCGAATGAT F G G G R L W F M L F H S K L L I A N D S V E V G Y G L C Y F I V N S - - R M I L R W R - V M V Y A I S - - T L N S E - . . . . . . 56545 ATGTATTGGGTAGTATTGTAAAGTCTTACATATGCTTAATTGTATGCTTGCATGATGTGA M Y W V V L - S L T Y A - L Y A C M M - C I G - Y C K V L H M L N C M L A - C D Y V L G S I V K S Y I C L I V C L H D V . . . . . . 56605 TTATGTAATTGTAATGGGTTGGAAAGATGAGGTTGTGAAGCTTAAACCTAAAACCCTCTG L C N C N G L E R - G C E A - T - N P L Y V I V M G W K D E V V K L K P K T L C I M - L - W V G K M R L - S L N L K P S . . . . . . 56665 TGTTAATGATGATGCCTTGGTATAAAAGAAGGCTTGATGAACTAAAAGAATGAGGTTAGT C - - - C L G I K E G L M N - K N E V S V N D D A L V - K K A - - T K R M R L V V L M M M P W Y K R R L D E L K E - G - . . . . . . 56725 GGATCAGGTGTCACGTTCCGACACCAGGATAGTAGTAGTGAATCGGGTGTCACGTTCCGA G S G V T F R H Q D S S S E S G V T F R D Q V S R S D T R I V V V N R V S R S D W I R C H V P T P G - - - - I G C H V P . . . . . . 56785 CACCAGGATAGTAATTGTGGATCGGGTGTCACGTTCCGACACCAGGATAGTAATAGTGGA H Q D S N C G S G V T F R H Q D S N S G T R I V I V D R V S R S D T R I V I V D T P G - - L W I G C H V P T P G - - - W . . . . . . 56845 TCGGGTATCACGTCCCGACACCAGGATAGTAGTAATGGATCGGGTGTCACGTTCCGACAC S G I T S R H Q D S S N G S G V T F R H R V S R P D T R I V V M D R V S R S D T I G Y H V P T P G - - - W I G C H V P T . . . . . . 56905 CAGGATAGTAGTAATGGATCGGGTGTCACGTTCCGACACCAGGATAGTAGTAGTGGATCG Q D S S N G S G V T F R H Q D S S S G S R I V V M D R V S R S D T R I V V V D R P G - - - W I G C H V P T P G - - - W I . . . . . . 56965 GGTGTCACGTTCCGACATCAGGATAGTAGTAAAGGATCGGAGTGTCACGTTCCGACACCA G V T F R H Q D S S K G S E C H V P T P V S R S D I R I V V K D R S V T F R H Q G C H V P T S G - - - R I G V S R S D T . 57025 GGATA G D R I Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-7_AGS-1_PPS_1 (56705 57028) (frame '2'; 324 bp, 108 residues) 1 TKRMRLVDQV SRSDTRIVVV NRVSRSDTRI VIVDRVSRSD TRIVIVDRVS RPDTRIVVMD 61 RVSRSDTRIV VMDRVSRSDT RIVVVDRVSR SDIRIVVKDR SVTFRHQD >C08HBa0294K15.1+_PGL-7_AGS-1_PPS_2 (56710 57027) (frame '1'; 318 bp, 106 residues) 1 KNEVSGSGVT FRHQDSSSES GVTFRHQDSN CGSGVTFRHQ DSNSGSGITS RHQDSSNGSG 61 VTFRHQDSSN GSGVTFRHQD SSSGSGVTFR HQDSSKGSEC HVPTPG >C08HBa0294K15.1+_PGL-7_AGS-1_PPS_3 (56018 56239) (frame '2'; 219 bp, 73 residues) 1 EQLSELRDDM AGRTVVGTTD RHRPFNEIQS LNFVTEAAGR TVIGTTGRHR LRNLDWVRFL 61 LNVLRGVLDY FCL- AGS-2 (56489 56787,56870 57760) SCR (e 0.895 d 0.000 a 0.000,e 0.832) Exon 1 56489 56787 ( 299 n); score: 0.895 Intron 1 56788 56869 ( 82 n); Pd: 0.000 Pa: 0.000 Exon 2 56870 57760 ( 891 n); score: 0.832 PGS (56489 56787,56870 57436) SGN-U335080- PGS (57310 57576) SGN-U335075+ PGS (57313 57760) SGN-U315280+ 3-phase translation of AGS-2 (+strand): . . . . . . 56489 GTGGAGGTAGGTTATGGTTTATGCTATTTCATAGTAAACTCTTAATAGCGAATGATATGT V E V G Y G L C Y F I V N S - - R M I C W R - V M V Y A I S - - T L N S E - Y V G G R L W F M L F H S K L L I A N D M . . . . . . 56549 ATTGGGTAGTATTGTAAAGTCTTACATATGCTTAATTGTATGCTTGCATGATGTGATTAT I G - Y C K V L H M L N C M L A - C D Y L G S I V K S Y I C L I V C L H D V I M Y W V V L - S L T Y A - L Y A C M M - L . . . . . . 56609 GTAATTGTAATGGGTTGGAAAGATGAGGTTGTGAAGCTTAAACCTAAAACCCTCTGTGTT V I V M G W K D E V V K L K P K T L C V - L - W V G K M R L - S L N L K P S V L C N C N G L E R - G C E A - T - N P L C . . . . . . 56669 AATGATGATGCCTTGGTATAAAAGAAGGCTTGATGAACTAAAAGAATGAGGTTAGTGGAT N D D A L V - K K A - - T K R M R L V D M M M P W Y K R R L D E L K E - G - W I - - - C L G I K E G L M N - K N E V S G . . . . . . : 56729 CAGGTGTCACGTTCCGACACCAGGATAGTAGTAGTGAATCGGGTGTCACGTTCCGACAC : A Q V S R S D T R I V V V N R V S R S D T : R C H V P T P G - - - - I G C H V P T : H S G V T F R H Q D S S S E S G V T F R H : . . . . . . 56871 TAGTAGTAATGGATCGGGTGTCACGTTCCGACACCAGGATAGTAGTAATGGATCGGGTGT - - - W I G C H V P T P G - - - W I G C S S N G S G V T F R H Q D S S N G S G V I V V M D R V S R S D T R I V V M D R V . . . . . . 56931 CACGTTCCGACACCAGGATAGTAGTAGTGGATCGGGTGTCACGTTCCGACATCAGGATAG H V P T P G - - - W I G C H V P T S G - T F R H Q D S S S G S G V T F R H Q D S S R S D T R I V V V D R V S R S D I R I . . . . . . 56991 TAGTAAAGGATCGGAGTGTCACGTTCCGACACCAGGATAGTAAAAGAATGAATCTTGAAT - - R I G V S R S D T R I V K E - I L N S K G S E C H V P T P G - - K N E S - I V V K D R S V T F R H Q D S K R M N L E . . . . . . 57051 CATGTTTATATACTCAGGTTTAAAGAAACTATTTTCCAAACGAGTATGGTGTGGAGGAGT H V Y I L R F K E T I F Q T S M V W R S M F I Y S G L K K L F S K R V W C G G V S C L Y T Q V - R N Y F P N E Y G V E E . . . . . . 57111 GAGTCCTCATAGATGCGCTTGGGTTGTGGCCAATGGTTATGGTACTTGTTGTTGTTGTCT E S S - M R L G C G Q W L W Y L L L L S S P H R C A W V V A N G Y G T C C C C L - V L I D A L G L W P M V M V L V V V V . . . . . . 57171 GTTGAGTATTGTAGTTGATTTTATGTTATTATATGATATATGTTGTTTTCTATTTTGAGT V E Y C S - F Y V I I - Y M L F S I L S L S I V V D F M L L Y D I C C F L F - V C - V L - L I L C Y Y M I Y V V F Y F E . . . . . . 57231 TGGCCGATGATACCTACTCAGTACTTGTGCCTTGTACTGACCCCTACTTGTATGTTTCTT W P M I P T Q Y L C L V L T P T C M F L G R - Y L L S T C A L Y - P L L V C F F L A D D T Y S V L V P C T D P Y L Y V S . . . . . . 57291 TCTTGTTATTTGTGGAGTGCAGCAAACGTGCCATCGACTTTGACTCAACCGCAACTCTAG S C Y L W S A A N V P S T L T Q P Q L - L V I C G V Q Q T C H R L - L N R N S S F L L F V E C S K R A I D F D S T A T L . . . . . . 57351 CCAGACTTCAGCATAATCAGATTTCAGGGTGAGATATTGTTCCTAGCTCGGACTGGATTC P D F S I I R F Q G E I L F L A R T G F Q T S A - S D F R V R Y C S - L G L D S A R L Q H N Q I S G - D I V P S S D W I . . . . . . 57411 TTTCCTTCGCGTCTTGATGTCTTGAAGTTCGGACATGGACTATCTCTTTTACTTATTTTA F P S R L D V L K F G H G L S L L L I L F L R V L M S - S S D M D Y L F Y L F - L S F A S - C L E V R T W T I S F T Y F . . . . . . 57471 GCTTCTTAGATACTCTTAGATTTAGTAATTTGAGGATAGATGTTCTTGTGATGATGACTT A S - I L L D L V I - G - M F L - - - L L L R Y S - I - - F E D R C S C D D D F S F L D T L R F S N L R I D V L V M M T . . . . . . 57531 CCAGATTTTGGGGATAATGATAAGTTTTGAGTTTTAGAAGTTAATTATTGATTTCGTTAA P D F G D N D K F - V L E V N Y - F R - Q I L G I M I S F E F - K L I I D F V N S R F W G - - - V L S F R S - L L I S L . . . . . . 57591 TGAGTTTTAATTCTTCCGCATTATATTCTATTTATTATCGTTGAATTGTTGGGGTTTAGA - V L I L P H Y I L F I I V E L L G F R E F - F F R I I F Y L L S L N C W G L D M S F N S S A L Y S I Y Y R - I V G V - . . . . . . 57651 TTGGTTGGTTCTCTCACATAGGAGGGTAAGAGTGGGTGCCACTCGCGGCCCGTTTTGGGT L V G S L T - E G K S G C H S R P V L G W L V L S H R R V R V G A T R G P F W V I G W F S H I G G - E W V P L A A R F G . . . . . 57711 CGTGACAAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATCACACAA R D K L G I R A L G S L V S S H V T N L V S E H - V R W S H H T S - Q T W Y Q S I R F V G L I T Q Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-7_AGS-2_PPS_1 (56710 56787,56870 57073) (frame '0'; 279 bp, 93 residues) 1 KNEVSGSGVT FRHQDSSSES GVTFRHIVVM DRVSRSDTRI VVMDRVSRSD TRIVVVDRVS 61 RSDIRIVVKD RSVTFRHQDS KRMNLESCLY TQV- >C08HBa0294K15.1+_PGL-7_AGS-2_PPS_2 (57185 57382) (frame '0'; 195 bp, 65 residues) 1 LILCYYMIYV VFYFELADDT YSVLVPCTDP YLYVSFLLFV ECSKRAIDFD STATLARLQH 61 NQISG- AGS-3 (56662 56953,56991 57560,57650 57656) SCR (e 0.870 d 0.000 a 0.000,e 0.704 d 0.000 a 0.991,e 1.000) Exon 1 56662 56953 ( 292 n); score: 0.870 Intron 1 56954 56990 ( 37 n); Pd: 0.000 Pa: 0.000 Exon 2 56991 57560 ( 570 n); score: 0.704 Intron 2 57561 57649 ( 89 n); Pd: 0.000 Pa: 0.991 Exon 3 57650 57656 ( 7 n); score: 1.000 PGS (56662 56953,56991 57417) SGN-U335078+ PGS (57389 57560,57650 57656) SGN-U315283+ 3-phase translation of AGS-3 (+strand): . . . . . . 56662 CTGTGTTAATGATGATGCCTTGGTATAAAAGAAGGCTTGATGAACTAAAAGAATGAGGTT L C - - - C L G I K E G L M N - K N E V C V N D D A L V - K K A - - T K R M R L V L M M M P W Y K R R L D E L K E - G . . . . . . 56722 AGTGGATCAGGTGTCACGTTCCGACACCAGGATAGTAGTAGTGAATCGGGTGTCACGTTC S G S G V T F R H Q D S S S E S G V T F V D Q V S R S D T R I V V V N R V S R S - W I R C H V P T P G - - - - I G C H V . . . . . . 56782 CGACACCAGGATAGTAATTGTGGATCGGGTGTCACGTTCCGACACCAGGATAGTAATAGT R H Q D S N C G S G V T F R H Q D S N S D T R I V I V D R V S R S D T R I V I V P T P G - - L W I G C H V P T P G - - - . . . . . . 56842 GGATCGGGTATCACGTCCCGACACCAGGATAGTAGTAATGGATCGGGTGTCACGTTCCGA G S G I T S R H Q D S S N G S G V T F R D R V S R P D T R I V V M D R V S R S D W I G Y H V P T P G - - - W I G C H V P . . . . . . : 56902 CACCAGGATAGTAGTAATGGATCGGGTGTCACGTTCCGACACCAGGATAGTA : TAGTAAAG H Q D S S N G S G V T F R H Q D S : I V K T R I V V M D R V S R S D T R I V : - - R T P G - - - W I G C H V P T P G - Y : S K . . . . . . 56999 GATCGGAGTGTCACGTTCCGACACCAGGATAGTAAAAGAATGAATCTTGAATCATGTTTA D R S V T F R H Q D S K R M N L E S C L I G V S R S D T R I V K E - I L N H V Y G S E C H V P T P G - - K N E S - I M F . . . . . . 57059 TATACTCAGGTTTAAAGAAACTATTTTCCAAACGAGTATGGTGTGGAGGAGTGAGTCCTC Y T Q V - R N Y F P N E Y G V E E - V L I L R F K E T I F Q T S M V W R S E S S I Y S G L K K L F S K R V W C G G V S P . . . . . . 57119 ATAGATGCGCTTGGGTTGTGGCCAATGGTTATGGTACTTGTTGTTGTTGTCTGTTGAGTA I D A L G L W P M V M V L V V V V C - V - M R L G C G Q W L W Y L L L L S V E Y H R C A W V V A N G Y G T C C C C L L S . . . . . . 57179 TTGTAGTTGATTTTATGTTATTATATGATATATGTTGTTTTCTATTTTGAGTTGGCCGAT L - L I L C Y Y M I Y V V F Y F E L A D C S - F Y V I I - Y M L F S I L S W P M I V V D F M L L Y D I C C F L F - V G R . . . . . . 57239 GATACCTACTCAGTACTTGTGCCTTGTACTGACCCCTACTTGTATGTTTCTTTCTTGTTA D T Y S V L V P C T D P Y L Y V S F L L I P T Q Y L C L V L T P T C M F L S C Y - Y L L S T C A L Y - P L L V C F F L V . . . . . . 57299 TTTGTGGAGTGCAGCAAACGTGCCATCGACTTTGACTCAACCGCAACTCTAGCCAGACTT F V E C S K R A I D F D S T A T L A R L L W S A A N V P S T L T Q P Q L - P D F I C G V Q Q T C H R L - L N R N S S Q T . . . . . . 57359 CAGCATAATCAGATTTCAGGGTGAGATATTGTTCCTAGCTCGGACTGGATTCTTTCCTTC Q H N Q I S G - D I V P S S D W I L S F S I I R F Q G E I L F L A R T G F F P S S A - S D F R V R Y C S - L G L D S F L . . . . . . 57419 GCGTCTTGATGTCTTGAAGTTCGGACATGGACTATCTCTTTTACTTATTTTAGCTTCTTA A S - C L E V R T W T I S F T Y F S F L R L D V L K F G H G L S L L L I L A S - R V L M S - S S D M D Y L F Y L F - L L . . . . . . 57479 GATACTCTTAGATTTAGTAATTTGAGGATAGATGTTCTTGTGATGATGACTTCCAGATTT D T L R F S N L R I D V L V M M T S R F I L L D L V I - G - M F L - - - L P D F R Y S - I - - F E D R C S C D D D F Q I . . . : 57539 TGGGGATAATGATAAGTTTTGA : ATTGGTT W G - - - V L : N W G D N D K F - : I G L G I M I S F E : L V Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-7_AGS-3_PPS_1 (56710 56953,56991 57073) (frame '1'; 324 bp, 108 residues) 1 KNEVSGSGVT FRHQDSSSES GVTFRHQDSN CGSGVTFRHQ DSNSGSGITS RHQDSSNGSG 61 VTFRHQDSSN GSGVTFRHQD SIVKDRSVTF RHQDSKRMNL ESCLYTQV- >C08HBa0294K15.1+_PGL-7_AGS-3_PPS_2 (57185 57382) (frame '1'; 195 bp, 65 residues) 1 LILCYYMIYV VFYFELADDT YSVLVPCTDP YLYVSFLLFV ECSKRAIDFD STATLARLQH 61 NQISG- AGS-4 (56725 56761,56796 57553) SCR (e 0.811 d 0.000 a 0.000,e 0.776) Exon 1 56725 56761 ( 37 n); score: 0.811 Intron 1 56762 56795 ( 34 n); Pd: 0.000 Pa: 0.000 Exon 2 56796 57553 ( 758 n); score: 0.776 PGS (56725 56761,56796 57553) SGN-U335071- 3-phase translation of AGS-4 (+strand): . . . . : . . 56725 GGATCAGGTGTCACGTTCCGACACCAGGATAGTAGTA : TAATTGTGGATCGGGTGTCACGT G S G V T F R H Q D S S : I I V D R V S R D Q V S R S D T R I V V : - L W I G C H V I R C H V P T P G - - Y : N C G S G V T . . . . . . 56819 TCCGACACCAGGATAGTAATAGTGGATCGGGTATCACGTCCCGACACCAGGATAGTAGTA S D T R I V I V D R V S R P D T R I V V P T P G - - - W I G Y H V P T P G - - - F R H Q D S N S G S G I T S R H Q D S S . . . . . . 56879 ATGGATCGGGTGTCACGTTCCGACACCAGGATAGTAGTAATGGATCGGGTGTCACGTTCC M D R V S R S D T R I V V M D R V S R S W I G C H V P T P G - - - W I G C H V P N G S G V T F R H Q D S S N G S G V T F . . . . . . 56939 GACACCAGGATAGTAGTAGTGGATCGGGTGTCACGTTCCGACATCAGGATAGTAGTAAAG D T R I V V V D R V S R S D I R I V V K T P G - - - W I G C H V P T S G - - - R R H Q D S S S G S G V T F R H Q D S S K . . . . . . 56999 GATCGGAGTGTCACGTTCCGACACCAGGATAGTAAAAGAATGAATCTTGAATCATGTTTA D R S V T F R H Q D S K R M N L E S C L I G V S R S D T R I V K E - I L N H V Y G S E C H V P T P G - - K N E S - I M F . . . . . . 57059 TATACTCAGGTTTAAAGAAACTATTTTCCAAACGAGTATGGTGTGGAGGAGTGAGTCCTC Y T Q V - R N Y F P N E Y G V E E - V L I L R F K E T I F Q T S M V W R S E S S I Y S G L K K L F S K R V W C G G V S P . . . . . . 57119 ATAGATGCGCTTGGGTTGTGGCCAATGGTTATGGTACTTGTTGTTGTTGTCTGTTGAGTA I D A L G L W P M V M V L V V V V C - V - M R L G C G Q W L W Y L L L L S V E Y H R C A W V V A N G Y G T C C C C L L S . . . . . . 57179 TTGTAGTTGATTTTATGTTATTATATGATATATGTTGTTTTCTATTTTGAGTTGGCCGAT L - L I L C Y Y M I Y V V F Y F E L A D C S - F Y V I I - Y M L F S I L S W P M I V V D F M L L Y D I C C F L F - V G R . . . . . . 57239 GATACCTACTCAGTACTTGTGCCTTGTACTGACCCCTACTTGTATGTTTCTTTCTTGTTA D T Y S V L V P C T D P Y L Y V S F L L I P T Q Y L C L V L T P T C M F L S C Y - Y L L S T C A L Y - P L L V C F F L V . . . . . . 57299 TTTGTGGAGTGCAGCAAACGTGCCATCGACTTTGACTCAACCGCAACTCTAGCCAGACTT F V E C S K R A I D F D S T A T L A R L L W S A A N V P S T L T Q P Q L - P D F I C G V Q Q T C H R L - L N R N S S Q T . . . . . . 57359 CAGCATAATCAGATTTCAGGGTGAGATATTGTTCCTAGCTCGGACTGGATTCTTTCCTTC Q H N Q I S G - D I V P S S D W I L S F S I I R F Q G E I L F L A R T G F F P S S A - S D F R V R Y C S - L G L D S F L . . . . . . 57419 GCGTCTTGATGTCTTGAAGTTCGGACATGGACTATCTCTTTTACTTATTTTAGCTTCTTA A S - C L E V R T W T I S F T Y F S F L R L D V L K F G H G L S L L L I L A S - R V L M S - S S D M D Y L F Y L F - L L . . . . . . 57479 GATACTCTTAGATTTAGTAATTTGAGGATAGATGTTCTTGTGATGATGACTTCCAGATTT D T L R F S N L R I D V L V M M T S R F I L L D L V I - G - M F L - - - L P D F R Y S - I - - F E D R C S C D D D F Q I . . 57539 TGGGGATAATGATAA W G - - - G D N D L G I M I Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-7_AGS-4_PPS_1 (56725 56761,56796 57073) (frame '1'; 312 bp, 104 residues) 1 GSGVTFRHQD SSIIVDRVSR SDTRIVIVDR VSRPDTRIVV MDRVSRSDTR IVVMDRVSRS 61 DTRIVVVDRV SRSDIRIVVK DRSVTFRHQD SKRMNLESCL YTQV- >C08HBa0294K15.1+_PGL-7_AGS-4_PPS_2 (57185 57382) (frame '1'; 195 bp, 65 residues) 1 LILCYYMIYV VFYFELADDT YSVLVPCTDP YLYVSFLLFV ECSKRAIDFD STATLARLQH 61 NQISG- PGL 8 (- strand): 62022 56703 AGS-1 (60766 59130,59094 56989,56956 56703) SCR (e 0.868 d 0.000 a 0.000,e 0.812 d 0.000 a 0.000,e 0.701) Exon 1 60766 59130 (1637 n); score: 0.868 Intron 1 59129 59095 ( 35 n); Pd: 0.000 Pa: 0.000 Exon 2 59094 56989 (2106 n); score: 0.812 Intron 2 56988 56957 ( 32 n); Pd: 0.000 Pa: 0.000 Exon 3 56956 56703 ( 254 n); score: 0.701 PGS (57979 56989,56956 56703) SGN-U315285- PGS (57957 57071) SGN-U315286- PGS (57717 57311) SGN-U315280- PGS (57542 57322) SGN-U316028- PGS (58029 57734) SGN-U335073- PGS (58174 58026) SGN-U335419- PGS (58870 58088) SGN-U335931- PGS (59564 59130,59094 58095) SGN-U317064+ PGS (59089 58211) SGN-U346572- PGS (59950 59195) SGN-U335939+ PGS (60248 59374) SGN-U335935+ PGS (60178 59421) SGN-U317065+ PGS (59776 59435) SGN-U335937+ PGS (60268 59476) SGN-U335936- PGS (60766 60055) SGN-U326740+ PGS (60382 60232) SGN-U345415+ 3-phase translation of AGS-1 (-strand): . . . . . . 60766 AATCCCTCGATAAATCGATGGTAGTAGCTAGCTAAACCAACAAAGCTACTTACCTCTGTA N P S I N R W - - L A K P T K L L T S V I P R - I D G S S - L N Q Q S Y L P L - S L D K S M V V A S - T N K A T Y L C . . . . . . 60706 ACATTAGTAGGTCTTTCCCAACTCTTCACTGCTTCGATCTTAGAAGGATCCACAATCACT T L V G L S Q L F T A S I L E G S T I T H - - V F P N S S L L R S - K D P Q S L N I S R S F P T L H C F D L R R I H N H . . . . . . 60646 CCATCCTTAGAAACCACATGCCCCAAGAAGGACACTGAATCTAGCCAAAACTCACACTTG P S L E T T C P K K D T E S S Q N S H L H P - K P H A P R R T L N L A K T H T W S I L R N H M P Q E G H - I - P K L T L . . . . . . 60586 GAGAATTTGGCATTAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAGTGCTCC E N L A L S F F S L N I S N T I L K C S R I W H - A F S P S T F P I P F S S A P G E F G I K L F L P Q H F Q Y H S Q V L . . . . . . 60526 TCATGTTCTTTCTTGCTCTTTGAGTATACCAGTATATCATCAACGAATACAATGACAAAG S C S F L L F E Y T S I S S T N T M T K H V L S C S L S I P V Y H Q R I Q - Q R L M F F L A L - V Y Q Y I I N E Y N D K . . . . . . 60466 AGATCTAGATATGGATTAAAGATTCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTC R S R Y G L K I P F I K L M N A A G A F D L D M D - R F R S S S S - T Q Q G H S E I - I W I K D S V H Q A H E R S R G I . . . . . . 60406 GTAAGCCCAAAAGACATTACTAAGAACTCGTAATACCCATATCTTGTTCGAAAAGCAGTC V S P K D I T K N S - Y P Y L V R K A V - A Q K T L L R T R N T H I L F E K Q S R K P K R H Y - E L V I P I S C S K S S . . . . . . 60346 TTGGGCACATTCGTTGCCCATATTTTCAATTGATGATAACCAGATCTCAAATCAATTTTT L G T F V A H I F N - - - P D L K S I F W A H S L P I F S I D D N Q I S N Q F L L G H I R C P Y F Q L M I T R S Q I N F . . . . . . 60286 GAGAAGGTACAAGCACCTTGTAACTGATCGAACAAATCATCGATGTGAGGAAGAGGATAC E K V Q A P C N - S N K S S M - G R G Y R R Y K H L V T D R T N H R C E E E D T - E G T S T L - L I E Q I I D V R K R I . . . . . . 60226 TTGTTCTTAACAGTTACCTTATTCAGTTGTCTGTAGTCAATGCACATCCGAAAACTTCCA L F L T V T L F S C L - S M H I R K L P C S - Q L P Y S V V C S Q C T S E N F H L V L N S Y L I Q L S V V N A H P K T S . . . . . . 60166 TCCTTCTTCTTCACAAACAAAACAGGAGTACCCCAAGGGGATGCACTTGGTCTAATAAAA S F F F T N K T G V P Q G D A L G L I K P S S S Q T K Q E Y P K G M H L V - - N I L L L H K Q N R S T P R G C T W S N K . . . . . . 60106 CCTTTCCCTAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCAGCGGGAGCCATT P F P N N S - S W A F N S L N S A G A I L S L T T L E V G P L T L L T Q R E P F T F P - Q L L K L G L - L S - L S G S H . . . . . . 60046 CTATAAGGGGGTATGGAAATGGGGCGAGTACCCGGCTCCAGATCAATACAGAAATCAATA L - G G M E M G R V P G S R S I Q K S I Y K G V W K W G E Y P A P D Q Y R N Q Y S I R G Y G N G A S T R L Q I N T E I N . . . . . . 59986 TCTCTATCTGGTGGCATACCAGAAAGGTCTGCAGGAAACACATCCAAAAACTCACGGACT S L S G G I P E R S A G N T S K N S R T L Y L V A Y Q K G L Q E T H P K T H G L I S I W W H T R K V C R K H I Q K L T D . . . . . . 59926 ATCGAAACCGACTCAATTGAAGGTACTTGGGTAGTATCATCCCTGAGGTGTGCCAAGAAA I E T D S I E G T W V V S S L R C A K K S K P T Q L K V L G - Y H P - G V P R K Y R N R L N - R Y L G S I I P E V C Q E . . . . . . 59866 GCTAAACACCCTTTACTAACCATTCTCTTAGCACGAAGAAATGAGATGATACGAACTGGA A K H P L L T I L L A R R N E M I R T G L N T L Y - P F S - H E E M R - Y E L E S - T P F T N H S L S T K K - D D T N W . . . . . . 59806 GTGGGAGTGTAGTCACCCTCCCACACTAACGGATCTGTCTCAGGCTTGGCCAATGTCACA V G V - S P S H T N G S V S G L A N V T W E C S H P P T L T D L S Q A W P M S Q S G S V V T L P H - R I C L R L G Q C H . . . . . . 59746 GTTTTGGCATTACAGTCTAAGATTGCAAAGTTTGGAGAAAGCCAAGTCATACCCAGAATT V L A L Q S K I A K F G E S Q V I P R I F W H Y S L R L Q S L E K A K S Y P E L S F G I T V - D C K V W R K P S H T Q N . . . . . . 59686 ACATCGAAATCAACCATTTCTAAGATAACCAAGTCTACATGAGTATTACTCCCCATAAAA T S K S T I S K I T K S T - V L L P I K H R N Q P F L R - P S L H E Y Y S P - K Y I E I N H F - D N Q V Y M S I T P H K . . . . . . 59626 GTCACAAGACAAGACCTATACACCTTTTCAACTATCACAGACTCACCCACCGGAGTAGAA V T R Q D L Y T F S T I T D S P T G V E S Q D K T Y T P F Q L S Q T H P P E - K S H K T R P I H L F N Y H R L T H R S R . . . . . . 59566 ACACGAATAGGCATGTCAAGCAATTCACAATGTAAATTAAGACCAGTAGCAAATGAGGAA T R I G M S S N S Q C K L R P V A N E E H E - A C Q A I H N V N - D Q - Q M R K N T N R H V K Q F T M - I K T S S K - G . . . . . . 59506 GATACATATGAAAATGTGGATCCAGGATCAAATAATACAGAAGCCATGCAATCACAAACC D T Y E N V D P G S N N T E A M Q S Q T I H M K M W I Q D Q I I Q K P C N H K P R Y I - K C G S R I K - Y R S H A I T N . . . . . . 59446 AAAAGATTACCTGTGATAACAACATCAGATGTCTCCGCTTCAGACCTCCCAGGGAAAGCA K R L P V I T T S D V S A S D L P G K A K D Y L - - Q H Q M S P L Q T S Q G K H Q K I T C D N N I R C L R F R P P R E S . . . . . . 59386 TAACAATGGGCCCTATCACCTGTCTATCCGTTGCCCCTACCATGTTGTGCTGCAGTCGCT - Q W A L S P V Y P L P L P C C A A V A N N G P Y H L S I R C P Y H V V L Q S L I T M G P I T C L S V A P T M L C C S R . . . . . . 59326 CCGGCTTGTCCGCCACCCCGGTTGATTTGTGTGACCACCATTACCTCGGCCACCATGTTC P A C P P P R L I C V T T I T S A T M F R L V R H P G - F V - P P L P R P P C S S G L S A T P V D L C D H H Y L G H H V . . . . . . 59266 TCCAGAATAGCGGCCTCTTCCATGACCACCTCTACCCCTGACTATTGAAGGTCTGTAACT S R I A A S S M T T S T P D Y - R S V T P E - R P L P - P P L P L T I E G L - L L Q N S G L F H D H L Y P - L L K V C N . . . . . . 59206 CTGTTTTGGACAATATCTCTTAATATGTCCAATTTCCCCACATCCATAACACTCTCTGGG L F W T I S L N M S N F P T S I T L S G C F G Q Y L L I C P I S P H P - H S L G S V L D N I S - Y V Q F P H I H N T L W . . : . . . . 59146 TTCGAGCATAGGTCTCT : TCAGAGAAATGTTGACCGGTCTGTGGACCCCCAGCTACAGCCT F E H R S L : Q R N V D R S V D P Q L Q P S S I G L : F R E M L T G L W T P S Y S L V R A - V S : S E K C - P V C G P P A T A . . . . . . 59051 GTAGTGAAGACTGAATAGGTCGGGCTGGATACCCTCCTGAACTCTGCCCTCTGGAGTAAG V V K T E - V G L D T L L N S A L W S K - - R L N R S G W I P S - T L P S G V R C S E D - I G R A G Y P P E L C P L E - . . . . . . 58991 AACTACTAAACTCACCTCCCTTACGAAACTTCTTAGTTGTTGATGCCATGGTGAAATCAT N Y - T H L P Y E T S - L L M P W - N H T T K L T S L T K L L S C - C H G E I I E L L N S P P L R N F L V V D A M V K S . . . . . . 58931 CTGGCTTCACTCCCTCCACCTCTATCACAAAGTCTACCACTTCCTAAAAGGATTTTGCTG L A S L P P P L S Q S L P L P K R I L L W L H S L H L Y H K V Y H F L K G F C C S G F T P S T S I T K S T T S - K D F A . . . . . . 58871 CAGTAGATACCTGTAAGGCTGGAATCTGCAAATCTGACCTCAATCCCTTCACAAAATGGC Q - I P V R L E S A N L T S I P S Q N G S R Y L - G W N L Q I - P Q S L H K M A A V D T C K A G I C K S D L N P F T K W . . . . . . 58811 GAATCCGCTCTTGTGGACTGAAGCAAAGCTGGGTGGCATACCTAGATAATGCACGACACT E S A L V D - S K A G W H T - I M H D T N P L L W T E A K L G G I P R - C T T L R I R S C G L K Q S W V A Y L D N A R H . . . . . . 58751 TAGCCTCATACGCAGTAACCGACATCCTGCCTTGCTCTAGGCTCAAGAACTCATCTCTAC - P H T Q - P T S C L A L G S R T H L Y S L I R S N R H P A L L - A Q E L I S T L A S Y A V T D I L P C S R L K N S S L . . . . . . 58691 TCCTATCCCTCTAAGTCCGGGGTATATACTTCTCCATAAACAAGCTAGAGAATGATGCCC S Y P S K S G V Y T S P - T S - R M M P P I P L S P G Y I L L H K Q A R E - C P L L S L - V R G I Y F S I N K L E N D A . . . . . . 58631 AAGTCATAGGCGGTGCCTGTGCTGGTTGACACTCGACATACGATCGCCACCACATTTTGG K S - A V P V L V D T R H T I A T T F W S H R R C L C W L T L D I R S P P H F G Q V I G G A C A G - H S T Y D R H H I L . . . . . . 58571 AATTTCCCTGAAACTTATAGGTTACAAACTCAACACCGAATCGTTCCACTATGCCCATCT N F P E T Y R L Q T Q H R I V P L C P S I S L K L I G Y K L N T E S F H Y A H L E F P - N L - V T N S T P N R S T M P I . . . . . . 58511 TATGTAGAAACTCATGACAATCAACCACAAAATCATAGGCATCCTCAGATTCAGCACCCT Y V E T H D N Q P Q N H R H P Q I Q H P M - K L M T I N H K I I G I L R F S T L L C R N S - Q S T T K S - A S S D S A P . . . . . . 58451 TGAAGACTGGAGGTTTCAATTTCAAGAACTTATTGAAAAGTTCGTGCTGATCACTTGTCA - R L E V S I S R T Y - K V R A D H L S E D W R F Q F Q E L I E K F V L I T C H L K T G G F N F K N L L K S S C - S L V . . . . . . 58391 TTATAGGTCCTGTAGTCAATCGAGGAAACGTGCCTATTTCCAATGAGGCATCCATGCGGG L - V L - S I E E T C L F P M R H P C G Y R S C S Q S R K R A Y F Q - G I H A G I I G P V V N R G N V P I S N E A S M R . . . . . . 58331 GAGCCATAGCAGCTGCATGTTGTACTCCCGAAACCTGAGGCGTTGGTGCAGAAAACACTG E P - Q L H V V L P K P E A L V Q K T L S H S S C M L Y S R N L R R W C R K H W G A I A A A C C T P E T - G V G A E N T . . . . . . 58271 GAGGTGTCTGGCCTTGATCAGATAACCCGCTAAGATAAGCAAGAACCTGGTTAATCATCT E V S G L D Q I T R - D K Q E P G - S S R C L A L I R - P A K I S K N L V N H L G G V W P - S D N P L R - A R T W L I I . . . . . . 58211 CTGGGGTAGGTTGGGGTGGTAATTCCTCATTCTGCACTTGTTCATCCTCCCCTTCCTCAC L G - V G V V I P H S A L V H P P L P H W G R L G W - F L I L H L F I L P F L T S G V G W G G N S S F C T C S S S P S S . . . . . . 58151 CCTCTCTTACTACTTCCTCAGTCGGTGGAGGAGTCACCGCCCTAGTACTAGATGGGCCAG P L L L L P Q S V E E S P P - Y - M G Q L S Y Y F L S R W R S H R P S T R W A R P S L T T S S V G G G V T A L V L D G P . . . . . . 58091 GTGCTTGTCCTCTTCCTCTAGAGGACGTCCTCCCGCGACCTCTACCACGGCCTCTTGCCA V L V L F L - R T S S R D L Y H G L L P C L S S S S R G R P P A T S T T A S C H G A C P L P L E D V L P R P L P R P L A . . . . . . 58031 CTGCTCATCTTCGAGCTACAACCCCAGTGGCTGGCTCAGACGCATCTTGTCTTGCCGGTG L L I F E L Q P Q W L A Q T H L V L P V C S S S S Y N P S G W L R R I L S C R C T A H L R A T T P V A G S D A S C L A G . . . . . . 57971 TTGGTGTTGGCGCAGTTGTTGCTCTAGTTCTAACCATCTGTGAAATAGAGTGAAGATGGT L V L A Q L L L - F - P S V K - S E D G W C W R S C C S S S N H L - N R V K M V V G V G A V V A L V L T I C E I E - R W . . . . . . 57911 CAGATACCAATTTGTATCACCTAGATACCAATTGGATCCAAGTAAAAGCACGAAAGAAGG Q I P I C I T - I P I G S K - K H E R R R Y Q F V S P R Y Q L D P S K S T K E G S D T N L Y H L D T N W I Q V K A R K K . . . . . . 57851 AAAGAATGGAATTTTCCTAAAGTCTTATAGCCTCTCAAAGAAAAGTAAAGGCGTCCCCCT K E W N F P K V L - P L K E K - R R P P K N G I F L K S Y S L S K K S K G V P L E R M E F S - S L I A S Q R K V K A S P . . . . . . 57791 ACCGTTCCTCAAGACTCTACTAGACTTGTTCTTGTGTGATGAGACCAACGAACCTAATGC T V P Q D S T R L V L V - - D Q R T - C P F L K T L L D L F L C D E T N E P N A Y R S S R L Y - T C S C V M R P T N L M . . . . . . 57731 TCTGATACCAAGTTTGTCACGACCCAAAACGGGCCGCGAGTGGCACCCACTCTTACCCTC S D T K F V T T Q N G P R V A P T L T L L I P S L S R P K T G R E W H P L L P S L - Y Q V C H D P K R A A S G T H S Y P . . . . . . 57671 CTATGTGAGAGAACCAACCAATCTAAACCCCAACAATTCAACGATAATAAATAGAATATA L C E R T N Q S K P Q Q F N D N K - N I Y V R E P T N L N P N N S T I I N R I - P M - E N Q P I - T P T I Q R - - I E Y . . . . . . 57611 ATGCGGAAGAATTAAAACTCATTAACGAAATCAATAATTAACTTCTAAAACTCAAAACTT M R K N - N S L T K S I I N F - N S K L C G R I K T H - R N Q - L T S K T Q N L N A E E L K L I N E I N N - L L K L K T . . . . . . 57551 ATCATTATCCCCAAAATCTGGAAGTCATCATCACAAGAACATCTATCCTCAAATTACTAA I I I P K I W K S S S Q E H L S S N Y - S L S P K S G S H H H K N I Y P Q I T K Y H Y P Q N L E V I I T R T S I L K L L . . . . . . 57491 ATCTAAGAGTATCTAAGAAGCTAAAATAAGTAAAAGAGATAGTCCATGTCCGAACTTCAA I - E Y L R S - N K - K R - S M S E L Q S K S I - E A K I S K R D S P C P N F K N L R V S K K L K - V K E I V H V R T S . . . . . . 57431 GACATCAAGACGCGAAGGAAAGAATCCAGTCCGAGCTAGGAACAATATCTCACCCTGAAA D I K T R R K E S S P S - E Q Y L T L K T S R R E G K N P V R A R N N I S P - N R H Q D A K E R I Q S E L G T I S H P E . . . . . . 57371 TCTGATTATGCTGAAGTCTGGCTAGAGTTGCGGTTGAGTCAAAGTCGATGGCACGTTTGC S D Y A E V W L E L R L S Q S R W H V C L I M L K S G - S C G - V K V D G T F A I - L C - S L A R V A V E S K S M A R L . . . . . . 57311 TGCACTCCACAAATAACAAGAAAGAAACATACAAGTAGGGGTCAGTACAAGGCACAAGTA C T P Q I T R K K H T S R G Q Y K A Q V A L H K - Q E R N I Q V G V S T R H K Y L H S T N N K K E T Y K - G S V Q G T S . . . . . . 57251 CTGAGTAGGTATCATCGGCCAACTCAAAATAGAAAACAACATATATCATATAATAACATA L S R Y H R P T Q N R K Q H I S Y N N I - V G I I G Q L K I E N N I Y H I I T - T E - V S S A N S K - K T T Y I I - - H . . . . . . 57191 AAATCAACTACAATACTCAACAGACAACAACAACAAGTACCATAACCATTGGCCACAACC K S T T I L N R Q Q Q Q V P - P L A T T N Q L Q Y S T D N N N K Y H N H W P Q P K I N Y N T Q Q T T T T S T I T I G H N . . . . . . 57131 CAAGCGCATCTATGAGGACTCACTCCTCCACACCATACTCGTTTGGAAAATAGTTTCTTT Q A H L - G L T P P H H T R L E N S F F K R I Y E D S L L H T I L V W K I V S L P S A S M R T H S S T P Y S F G K - F L . . . . . . 57071 AAACCTGAGTATATAAACATGATTCAAGATTCATTCTTTTACTATCCTGGTGTCGGAACG K P E Y I N M I Q D S F F Y Y P G V G T N L S I - T - F K I H S F T I L V S E R - T - V Y K H D S R F I L L L S W C R N . . . : . . . 57011 TGACACTCCGATCCTTTACTACT : TACTACTATCCTGGTGTCGGAACGTGACACCCGATCC - H S D P L L L : T T I L V S E R D T R S D T P I L Y Y : L L L S W C R N V T P D P V T L R S F T T : Y Y Y P G V G T - H P I . . . . . . 56919 ATTACTACTATCCTGGTGTCGGAACGTGACACCCGATCCATTACTACTATCCTGGTGTCG I T T I L V S E R D T R S I T T I L V S L L L S W C R N V T P D P L L L S W C R H Y Y Y P G V G T - H P I H Y Y Y P G V . . . . . . 56859 GGACGTGATACCCGATCCACTATTACTATCCTGGTGTCGGAACGTGACACCCGATCCACA G R D T R S T I T I L V S E R D T R S T D V I P D P L L L S W C R N V T P D P Q G T - Y P I H Y Y Y P G V G T - H P I H . . . . . . 56799 ATTACTATCCTGGTGTCGGAACGTGACACCCGATTCACTACTACTATCCTGGTGTCGGAA I T I L V S E R D T R F T T T I L V S E L L S W C R N V T P D S L L L S W C R N N Y Y P G V G T - H P I H Y Y Y P G V G . . . . 56739 CGTGACACCTGATCCACTAACCTCATTCTTTTAGTTC R D T - S T N L I L L V V T P D P L T S F F - F T - H L I H - P H S F S Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-8_AGS-1_PPS_1 (60739 60374) (frame '1'; 363 bp, 121 residues) 1 LAKPTKLLTS VTLVGLSQLF TASILEGSTI TPSLETTCPK KDTESSQNSH LENLALSFFS 61 LNISNTILKC SSCSFLLFEY TSISSTNTMT KRSRYGLKIP FIKLMNAAGA FVSPKDITKN 121 S- >C08HBa0294K15.1-_PGL-8_AGS-1_PPS_2 (57928 57611) (frame '2'; 315 bp, 105 residues) 1 NRVKMVRYQF VSPRYQLDPS KSTKEGKNGI FLKSYSLSKK SKGVPLPFLK TLLDLFLCDE 61 TNEPNALIPS LSRPKTGREW HPLLPSYVRE PTNLNPNNST IINRI- >C08HBa0294K15.1-_PGL-8_AGS-1_PPS_3 (58233 57919) (frame '0'; 312 bp, 104 residues) 1 ARTWLIISGV GWGGNSSFCT CSSSPSSPSL TTSSVGGGVT ALVLDGPGAC PLPLEDVLPR 61 PLPRPLATAH LRATTPVAGS DASCLAGVGV GAVVALVLTI CEIE- >C08HBa0294K15.1-_PGL-8_AGS-1_PPS_4 (57049 56989,56956 56706) (frame '2'; 309 bp, 103 residues) 1 FKIHSFTILV SERDTPILYY LLLSWCRNVT PDPLLLSWCR NVTPDPLLLS WCRDVIPDPL 61 LLSWCRNVTP DPQLLSWCRN VTPDSLLLSW CRNVTPDPLT SFF- >C08HBa0294K15.1-_PGL-8_AGS-1_PPS_5 (59644 59384) (frame '1'; 258 bp, 86 residues) 1 VLLPIKVTRQ DLYTFSTITD SPTGVETRIG MSSNSQCKLR PVANEEDTYE NVDPGSNNTE 61 AMQSQTKRLP VITTSDVSAS DLPGKA- >C08HBa0294K15.1-_PGL-8_AGS-1_PPS_7 (60040 59795) (frame '1'; 243 bp, 81 residues) 1 GGMEMGRVPG SRSIQKSISL SGGIPERSAG NTSKNSRTIE TDSIEGTWVV SSLRCAKKAK 61 HPLLTILLAR RNEMIRTGVG V- >C08HBa0294K15.1-_PGL-8_AGS-1_PPS_6 (57392 57147) (frame '1'; 243 bp, 81 residues) 1 EQYLTLKSDY AEVWLELRLS QSRWHVCCTP QITRKKHTSR GQYKAQVLSR YHRPTQNRKQ 61 HISYNNIKST TILNRQQQQV P- >C08HBa0294K15.1-_PGL-8_AGS-1_PPS_8 (58884 58678) (frame '0'; 204 bp, 68 residues) 1 KDFAAVDTCK AGICKSDLNP FTKWRIRSCG LKQSWVAYLD NARHLASYAV TDILPCSRLK 61 NSSLLLSL- AGS-2 (60159 59666,58887 58573) SCR (e 0.889 d 0.000 a 0.000,e 0.802) Exon 1 60159 59666 ( 494 n); score: 0.889 Intron 1 59665 58888 ( 778 n); Pd: 0.000 Pa: 0.000 Exon 2 58887 58573 ( 315 n); score: 0.802 PGS (60159 59666,58887 58573) SGN-U335938+ 3-phase translation of AGS-2 (-strand): . . . . . . 60159 TCTTCACAAACAAAACAGGAGTACCCCAAGGGGATGCACTTGGTCTAATAAAACCTTTCC S S Q T K Q E Y P K G M H L V - - N L S L H K Q N R S T P R G C T W S N K T F P F T N K T G V P Q G D A L G L I K P F . . . . . . 60099 CTAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCAGCGGGAGCCATTCTATAAG L T T L E V G P L T L L T Q R E P F Y K - Q L L K L G L - L S - L S G S H S I R P N N S - S W A F N S L N S A G A I L - . . . . . . 60039 GGGGTATGGAAATGGGGCGAGTACCCGGCTCCAGATCAATACAGAAATCAATATCTCTAT G V W K W G E Y P A P D Q Y R N Q Y L Y G Y G N G A S T R L Q I N T E I N I S I G G M E M G R V P G S R S I Q K S I S L . . . . . . 59979 CTGGTGGCATACCAGAAAGGTCTGCAGGAAACACATCCAAAAACTCACGGACTATCGAAA L V A Y Q K G L Q E T H P K T H G L S K W W H T R K V C R K H I Q K L T D Y R N S G G I P E R S A G N T S K N S R T I E . . . . . . 59919 CCGACTCAATTGAAGGTACTTGGGTAGTATCATCCCTGAGGTGTGCCAAGAAAGCTAAAC P T Q L K V L G - Y H P - G V P R K L N R L N - R Y L G S I I P E V C Q E S - T T D S I E G T W V V S S L R C A K K A K . . . . . . 59859 ACCCTTTACTAACCATTCTCTTAGCACGAAGAAATGAGATGATACGAACTGGAGTGGGAG T L Y - P F S - H E E M R - Y E L E W E P F T N H S L S T K K - D D T N W S G S H P L L T I L L A R R N E M I R T G V G . . . . . . 59799 TGTAGTCACCCTCCCACACTAACGGATCTGTCTCAGGCTTGGCCAATGTCACAGTTTTGG C S H P P T L T D L S Q A W P M S Q F W V V T L P H - R I C L R L G Q C H S F G V - S P S H T N G S V S G L A N V T V L . . . . . . 59739 CATTACAGTCTAAGATTGCAAAGTTTGGAGAAAGCCAAGTCATACCCAGAATTACATCGA H Y S L R L Q S L E K A K S Y P E L H R I T V - D C K V W R K P S H T Q N Y I E A L Q S K I A K F G E S Q V I P R I T S . . : . . . . 59679 AATCAACCATTTCT : TAAAAGGATTTTGCTGCAGTAGATACCTGTAAGGCTGGAATCTGCA N Q P F L : K R I L L Q - I P V R L E S A I N H F : L K G F C C S R Y L - G W N L Q K S T I S : - K D F A A V D T C K A G I C . . . . . . 58841 AATCTGACCTCAATCCCTTCACAAAATGGCGAATCCGCTCTTGTGGACTGAAGCAAAGCT N L T S I P S Q N G E S A L V D - S K A I - P Q S L H K M A N P L L W T E A K L K S D L N P F T K W R I R S C G L K Q S . . . . . . 58781 GGGTGGCATACCTAGATAATGCACGACACTTAGCCTCATACGCAGTAACCGACATCCTGC G W H T - I M H D T - P H T Q - P T S C G G I P R - C T T L S L I R S N R H P A W V A Y L D N A R H L A S Y A V T D I L . . . . . . 58721 CTTGCTCTAGGCTCAAGAACTCATCTCTACTCCTATCCCTCTAAGTCCGGGGTATATACT L A L G S R T H L Y S Y P S K S G V Y T L L - A Q E L I S T P I P L S P G Y I L P C S R L K N S S L L L S L - V R G I Y . . . . . . 58661 TCTCCATAAACAAGCTAGAGAATGATGCCCAAGTCATAGGCGGTGCCTGTGCTGGTTGAC S P - T S - R M M P K S - A V P V L V D L H K Q A R E - C P S H R R C L C W L T F S I N K L E N D A Q V I G G A C A G - . . . 58601 ACTCGACATACGATCGCCACCACATTTTG T R H T I A T T F L D I R S P P H F H S T Y D R H H I L Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-8_AGS-2_PPS_1 (60040 59795) (frame '0'; 243 bp, 81 residues) 1 GGMEMGRVPG SRSIQKSISL SGGIPERSAG NTSKNSRTIE TDSIEGTWVV SSLRCAKKAK 61 HPLLTILLAR RNEMIRTGVG V- >C08HBa0294K15.1-_PGL-8_AGS-2_PPS_2 (58884 58678) (frame '0'; 204 bp, 68 residues) 1 KDFAAVDTCK AGICKSDLNP FTKWRIRSCG LKQSWVAYLD NARHLASYAV TDILPCSRLK 61 NSSLLLSL- AGS-3 (59568 59130,59093 58836) SCR (e 0.884 d 0.000 a 0.000,e 0.760) Exon 1 59568 59130 ( 439 n); score: 0.884 Intron 1 59129 59094 ( 36 n); Pd: 0.000 Pa: 0.000 Exon 2 59093 58836 ( 258 n); score: 0.760 PGS (59568 59130,59093 58836) SGN-U335930+ 3-phase translation of AGS-3 (-strand): . . . . . . 59568 AAACACGAATAGGCATGTCAAGCAATTCACAATGTAAATTAAGACCAGTAGCAAATGAGG K H E - A C Q A I H N V N - D Q - Q M R N T N R H V K Q F T M - I K T S S K - G T R I G M S S N S Q C K L R P V A N E . . . . . . 59508 AAGATACATATGAAAATGTGGATCCAGGATCAAATAATACAGAAGCCATGCAATCACAAA K I H M K M W I Q D Q I I Q K P C N H K R Y I - K C G S R I K - Y R S H A I T N E D T Y E N V D P G S N N T E A M Q S Q . . . . . . 59448 CCAAAAGATTACCTGTGATAACAACATCAGATGTCTCCGCTTCAGACCTCCCAGGGAAAG P K D Y L - - Q H Q M S P L Q T S Q G K Q K I T C D N N I R C L R F R P P R E S T K R L P V I T T S D V S A S D L P G K . . . . . . 59388 CATAACAATGGGCCCTATCACCTGTCTATCCGTTGCCCCTACCATGTTGTGCTGCAGTCG H N N G P Y H L S I R C P Y H V V L Q S I T M G P I T C L S V A P T M L C C S R A - Q W A L S P V Y P L P L P C C A A V . . . . . . 59328 CTCCGGCTTGTCCGCCACCCCGGTTGATTTGTGTGACCACCATTACCTCGGCCACCATGT L R L V R H P G - F V - P P L P R P P C S G L S A T P V D L C D H H Y L G H H V A P A C P P P R L I C V T T I T S A T M . . . . . . 59268 TCTCCAGAATAGCGGCCTCTTCCATGACCACCTCTACCCCTGACTATTGAAGGTCTGTAA S P E - R P L P - P P L P L T I E G L - L Q N S G L F H D H L Y P - L L K V C N F S R I A A S S M T T S T P D Y - R S V . . . . . . 59208 CTCTGTTTTGGACAATATCTCTTAATATGTCCAATTTCCCCACATCCATAACACTCTCTG L C F G Q Y L L I C P I S P H P - H S L S V L D N I S - Y V Q F P H I H N T L W T L F W T I S L N M S N F P T S I T L S . . : . . . . 59148 GGTTCGAGCATAGGTCTCT : CAGAGAAATGTTGACCGGTCTGTGGACCCCCAGCTACAGCC G S S I G L : S E K C - P V C G P P A T A V R A - V S : Q R N V D R S V D P Q L Q P G F E H R S L : R E M L T G L W T P S Y S . . . . . . 59052 TGTAGTGAAGACTGAATAGGTCGGGCTGGATACCCTCCTGAACTCTGCCCTCTGGAGTAA C S E D - I G R A G Y P P E L C P L E - V V K T E - V G L D T L L N S A L W S K L - - R L N R S G W I P S - T L P S G V . . . . . . 58992 GAACTACTAAACTCACCTCCCTTACGAAACTTCTTAGTTGTTGATGCCATGGTGAAATCA E L L N S P P L R N F L V V D A M V K S N Y - T H L P Y E T S - L L M P W - N H R T T K L T S L T K L L S C - C H G E I . . . . . . 58932 TCTGGCTTCACTCCCTCCACCTCTATCACAAAGTCTACCACTTCCTAAAAGGATTTTGCT S G F T P S T S I T K S T T S - K D F A L A S L P P P L S Q S L P L P K R I L L I W L H S L H L Y H K V Y H F L K G F C . . . . 58872 GCAGTAGATACCTGTAAGGCTGGAATCTGCAAATCTG A V D T C K A G I C K S Q - I P V R L E S A N L C S R Y L - G W N L Q I Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-8_AGS-3_PPS_1 (59471 59226) (frame '2'; 243 bp, 81 residues) 1 YRSHAITNQK ITCDNNIRCL RFRPPRESIT MGPITCLSVA PTMLCCSRSG LSATPVDLCD 61 HHYLGHHVLQ NSGLFHDHLY P- AGS-4 (59586 59557,59521 59130,59093 58937) SCR (e 0.633 d 0.922 a 0.000,e 0.844 d 0.000 a 0.000,e 0.761) Exon 1 59586 59557 ( 30 n); score: 0.633 Intron 1 59556 59522 ( 35 n); Pd: 0.922 Pa: 0.000 Exon 2 59521 59130 ( 392 n); score: 0.844 Intron 2 59129 59094 ( 36 n); Pd: 0.000 Pa: 0.000 Exon 3 59093 58937 ( 157 n); score: 0.761 PGS (59586 59557,59521 59130,59093 58937) SGN-U335933+ 3-phase translation of AGS-4 (-strand): . . . : . . . 59586 ACTCACCCACCGGAGTAGAAACACGAATAG : GTAGCAAATGAGGAAGATACATATGAAAAT T H P P E - K H E - : V A N E E D T Y E N L T H R S R N T N R : - Q M R K I H M K M S P T G V E T R I : G S K - G R Y I - K . . . . . . 59491 GTGGATCCAGGATCAAATAATACAGAAGCCATGCAATCACAAACCAAAAGATTACCTGTG V D P G S N N T E A M Q S Q T K R L P V W I Q D Q I I Q K P C N H K P K D Y L - C G S R I K - Y R S H A I T N Q K I T C . . . . . . 59431 ATAACAACATCAGATGTCTCCGCTTCAGACCTCCCAGGGAAAGCATAACAATGGGCCCTA I T T S D V S A S D L P G K A - Q W A L - Q H Q M S P L Q T S Q G K H N N G P Y D N N I R C L R F R P P R E S I T M G P . . . . . . 59371 TCACCTGTCTATCCGTTGCCCCTACCATGTTGTGCTGCAGTCGCTCCGGCTTGTCCGCCA S P V Y P L P L P C C A A V A P A C P P H L S I R C P Y H V V L Q S L R L V R H I T C L S V A P T M L C C S R S G L S A . . . . . . 59311 CCCCGGTTGATTTGTGTGACCACCATTACCTCGGCCACCATGTTCTCCAGAATAGCGGCC P R L I C V T T I T S A T M F S R I A A P G - F V - P P L P R P P C S P E - R P T P V D L C D H H Y L G H H V L Q N S G . . . . . . 59251 TCTTCCATGACCACCTCTACCCCTGACTATTGAAGGTCTGTAACTCTGTTTTGGACAATA S S M T T S T P D Y - R S V T L F W T I L P - P P L P L T I E G L - L C F G Q Y L F H D H L Y P - L L K V C N S V L D N . . . . . . 59191 TCTCTTAATATGTCCAATTTCCCCACATCCATAACACTCTCTGGGTTCGAGCATAGGTCT S L N M S N F P T S I T L S G F E H R S L L I C P I S P H P - H S L G S S I G L I S - Y V Q F P H I H N T L W V R A - V . : . . . . . 59131 CT : CAGAGAAATGTTGACCGGTCTGTGGACCCCCAGCTACAGCCTGTAGTGAAGACTGAAT L : R E M L T G L W T P S Y S L - - R L N : S E K C - P V C G P P A T A C S E D - I S : Q R N V D R S V D P Q L Q P V V K T E . . . . . . 59035 AGGTCGGGCTGGATACCCTCCTGAACTCTGCCCTCTGGAGTAAGAACTACTAAACTCACC R S G W I P S - T L P S G V R T T K L T G R A G Y P P E L C P L E - E L L N S P - V G L D T L L N S A L W S K N Y - T H . . . . 58975 TCCCTTACGAAACTTCTTAGTTGTTGATGCCATGGTGAA S L T K L L S C - C H G E P L R N F L V V D A M V L P Y E T S - L L M P W - Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-8_AGS-4_PPS_1 (59471 59226) (frame '0'; 243 bp, 81 residues) 1 YRSHAITNQK ITCDNNIRCL RFRPPRESIT MGPITCLSVA PTMLCCSRSG LSATPVDLCD 61 HHYLGHHVLQ NSGLFHDHLY P- AGS-5 (62022 60996) SCR (e 0.903) Exon 1 62022 60996 (1027 n); score: 0.903 PGS (61581 60996) SGN-U328094+ PGS (62022 61247) SGN-U336382+ PGS (61995 61698) SGN-U336381+ 3-phase translation of AGS-5 (-strand): . . . . . . 62022 CATGCAATGTTTTCCAAAACATAGAAGTAAACTGCGTACCCCTATTTGATATAATGGAAA H A M F S K T - K - T A Y P Y L I - W K M Q C F P K H R S K L R T P I - Y N G K C N V F Q N I E V N C V P L F D I M E . . . . . . 61962 GTGGAACTCCATGCAATCGAACAATTTCTGAGATGTAAAGTTTGGCCAACTTCTCTGCAT V E L H A I E Q F L R C K V W P T S L H W N S M Q S N N F - D V K F G Q L L C I S G T P C N R T I S E M - S L A N F S A . . . . . . 61902 TATAAGTCACCTTGACCGGAATGAAATGAGCAGACTTAGTTAATTTGTCAACAATTACCC Y K S P - P E - N E Q T - L I C Q Q L P I S H L D R N E M S R L S - F V N N Y P L - V T L T G M K - A D L V N L S T I T . . . . . . 61842 AAATGGAGTCATACTTACCCATTGTCTTTGGAAGACCAACCACGAAGTCCATTGCAATTC K W S H T Y P L S L E D Q P R S P L Q F N G V I L T H C L W K T N H E V H C N S Q M E S Y L P I V F G R P T T K S I A I . . . . . . 61782 TCTCCCACTTCCATTCAGGAATGGACATTCTCTGAAGTGTCCCTCCAGGCCTCTGGTGTT S P T S I Q E W T F S E V S L Q A S G V L P L P F R N G H S L K C P S R P L V F L S H F H S G M D I L - S V P P G L W C . . . . . . 61722 CATACTTTACTTGCTGACAATTCGGGCATTGAGCAACAAAATCAACAATGTCACGCTTCA H T L L A D N S G I E Q Q N Q Q C H A S I L Y L L T I R A L S N K I N N V T L H S Y F T C - Q F G H - A T K S T M S R F . . . . . . 61662 TCCTACTCCACAAAAAATGTTGCTTTAGATCACGATACATCTTGGTTGCACCAGGATGTA S Y S T K N V A L D H D T S W L H Q D V P T P Q K M L L - I T I H L G C T R M Y I L L H K K C C F R S R Y I L V A P G C . . . . . . 61602 TAGAATACCTTGAACTATGAGCCTTTGTAAGAATAGTGTGAATCAAATCATCGACACGGG - N T L N Y E P L - E - C E S N H R H G R I P - T M S L C K N S V N Q I I D T G I E Y L E L - A F V R I V - I K S S T R . . . . . . 61542 GTACACATACCCTTCCCTTAATTCTCAAAACACCTTCCTCATCGATTTTTGCTTCTTTAG V H I P F P - F S K H L P H R F L L L - Y T Y P S L N S Q N T F L I D F C F F S G T H T L P L I L K T P S S S I F A S L . . . . . . 61482 CCTCTCCTCGCAACACCTTATCTCGGATCCGGATCAGTTTCTCATCGGTAAACTGTTTTC P L L A T P Y L G S G S V S H R - T V F L S S Q H L I S D P D Q F L I G K L F S A S P R N T L S R I R I S F S S V N C F . . . . . . 61422 CTTTAATCTTATCAAGAAAGGAAGATCTTGCCTCCACACAGGCCAAAAATCCTCCCTTCC L - S Y Q E R K I L P P H R P K I L P S F N L I K K G R S C L H T G Q K S S L P P L I L S R K E D L A S T Q A K N P P F . . . . . . 61362 CATTTACTTCTAGCCTCATAAAGTCATTAGCCAGAGTCTGAACCTCTCTAGCCAATGGGC H L L L A S - S H - P E S E P L - P M G I Y F - P H K V I S Q S L N L S S Q W A P F T S S L I K S L A R V - T S L A N G . . . . . . 61302 GTCTAGAAACCTGCAAGTGGGCTAGACTTCCCATGCTCCCTGCCTTTCTACTTAAAGCAT V - K P A S G L D F P C S L P F Y L K H S R N L Q V G - T S H A P C L S T - S I R L E T C K W A R L P M L P A F L L K A . . . . . . 61242 CTGCCACAACATTAGCTTTTCCCGGATGATACAAAATAGTGATATCATAGTCCTTCAGTA L P Q H - L F P D D T K - - Y H S P S V C H N I S F S R M I Q N S D I I V L Q - S A T T L A F P G - Y K I V I S - S F S . . . . . . 61182 GTTCCATCCACCTTCTCTGTCTCAAATTCAAATCTTTCTAAGTAAAGACATACAGTAAAC V P S T F S V S N S N L S K - R H T V N F H P P S L S Q I Q I F L S K D I Q - T S S I H L L C L K F K S F - V K T Y S K . . . . . . 61122 TACGATGATCCGTATAGACTTCACACTTAACCCCATATAGATAATGTCTCTATTGCTTTA Y D D P Y R L H T - P H I D N V S I A L T M I R I D F T L N P I - I M S L L L - L R - S V - T S H L T P Y R - C L Y C F . . . . . . 61062 ATGCAAACACTACCGCAGCCAACTCCCAATCATGGGTCGGATAATTACGTTCATGCACCT M Q T L P Q P T P N H G S D N Y V H A P C K H Y R S Q L P I M G R I I T F M H L N A N T T A A N S Q S W V G - L R S C T . 61002 TTAATTG L I - L F N Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-8_AGS-5_PPS_1 (61863 61600) (frame '1'; 261 bp, 87 residues) 1 LICQQLPKWS HTYPLSLEDQ PRSPLQFSPT SIQEWTFSEV SLQASGVHTL LADNSGIEQQ 61 NQQCHASSYS TKNVALDHDT SWLHQDV- >C08HBa0294K15.1-_PGL-8_AGS-5_PPS_3 (61589 61350) (frame '2'; 237 bp, 79 residues) 1 TMSLCKNSVN QIIDTGYTYP SLNSQNTFLI DFCFFSLSSQ HLISDPDQFL IGKLFSFNLI 61 KKGRSCLHTG QKSSLPIYF- >C08HBa0294K15.1-_PGL-8_AGS-5_PPS_2 (61561 61322) (frame '0'; 237 bp, 79 residues) 1 IKSSTRGTHT LPLILKTPSS SIFASLASPR NTLSRIRISF SSVNCFPLIL SRKEDLASTQ 61 AKNPPFPFTS SLIKSLARV- 3-phase translation of AGS-5 (+strand): . . . . . . 60996 CAATTAAAGGTGCATGAACGTAATTATCCGACCCATGATTGGGAGTTGGCTGCGGTAGTG Q L K V H E R N Y P T H D W E L A A V V N - R C M N V I I R P M I G S W L R - C I K G A - T - L S D P - L G V G C G S . . . . . . 61056 TTTGCATTAAAGCAATAGAGACATTATCTATATGGGGTTAAGTGTGAAGTCTATACGGAT F A L K Q - R H Y L Y G V K C E V Y T D L H - S N R D I I Y M G L S V K S I R I V C I K A I E T L S I W G - V - S L Y G . . . . . . 61116 CATCGTAGTTTACTGTATGTCTTTACTTAGAAAGATTTGAATTTGAGACAGAGAAGGTGG H R S L L Y V F T - K D L N L R Q R R W I V V Y C M S L L R K I - I - D R E G G S S - F T V C L Y L E R F E F E T E K V . . . . . . 61176 ATGGAACTACTGAAGGACTATGATATCACTATTTTGTATCATCCGGGAAAAGCTAATGTT M E L L K D Y D I T I L Y H P G K A N V W N Y - R T M I S L F C I I R E K L M L D G T T E G L - Y H Y F V S S G K S - C . . . . . . 61236 GTGGCAGATGCTTTAAGTAGAAAGGCAGGGAGCATGGGAAGTCTAGCCCACTTGCAGGTT V A D A L S R K A G S M G S L A H L Q V W Q M L - V E R Q G A W E V - P T C R F C G R C F K - K G R E H G K S S P L A G . . . . . . 61296 TCTAGACGCCCATTGGCTAGAGAGGTTCAGACTCTGGCTAATGACTTTATGAGGCTAGAA S R R P L A R E V Q T L A N D F M R L E L D A H W L E R F R L W L M T L - G - K F - T P I G - R G S D S G - - L Y E A R . . . . . . 61356 GTAAATGGGAAGGGAGGATTTTTGGCCTGTGTGGAGGCAAGATCTTCCTTTCTTGATAAG V N G K G G F L A C V E A R S S F L D K - M G R E D F W P V W R Q D L P F L I R S K W E G R I F G L C G G K I F L S - - . . . . . . 61416 ATTAAAGGAAAACAGTTTACCGATGAGAAACTGATCCGGATCCGAGATAAGGTGTTGCGA I K G K Q F T D E K L I R I R D K V L R L K E N S L P M R N - S G S E I R C C E D - R K T V Y R - E T D P D P R - G V A . . . . . . 61476 GGAGAGGCTAAAGAAGCAAAAATCGATGAGGAAGGTGTTTTGAGAATTAAGGGAAGGGTA G E A K E A K I D E E G V L R I K G R V E R L K K Q K S M R K V F - E L R E G Y R R G - R S K N R - G R C F E N - G K G . . . . . . 61536 TGTGTACCCCGTGTCGATGATTTGATTCACACTATTCTTACAAAGGCTCATAGTTCAAGG C V P R V D D L I H T I L T K A H S S R V Y P V S M I - F T L F L Q R L I V Q G M C T P C R - F D S H Y S Y K G S - F K . . . . . . 61596 TATTCTATACATCCTGGTGCAACCAAGATGTATCGTGATCTAAAGCAACATTTTTTGTGG Y S I H P G A T K M Y R D L K Q H F L W I L Y I L V Q P R C I V I - S N I F C G V F Y T S W C N Q D V S - S K A T F F V . . . . . . 61656 AGTAGGATGAAGCGTGACATTGTTGATTTTGTTGCTCAATGCCCGAATTGTCAGCAAGTA S R M K R D I V D F V A Q C P N C Q Q V V G - S V T L L I L L L N A R I V S K - E - D E A - H C - F C C S M P E L S A S . . . . . . 61716 AAGTATGAACACCAGAGGCCTGGAGGGACACTTCAGAGAATGTCCATTCCTGAATGGAAG K Y E H Q R P G G T L Q R M S I P E W K S M N T R G L E G H F R E C P F L N G S K V - T P E A W R D T S E N V H S - M E . . . . . . 61776 TGGGAGAGAATTGCAATGGACTTCGTGGTTGGTCTTCCAAAGACAATGGGTAAGTATGAC W E R I A M D F V V G L P K T M G K Y D G R E L Q W T S W L V F Q R Q W V S M T V G E N C N G L R G W S S K D N G - V - . . . . . . 61836 TCCATTTGGGTAATTGTTGACAAATTAACTAAGTCTGCTCATTTCATTCCGGTCAAGGTG S I W V I V D K L T K S A H F I P V K V P F G - L L T N - L S L L I S F R S R - L H L G N C - Q I N - V C S F H S G Q G . . . . . . 61896 ACTTATAATGCAGAGAAGTTGGCCAAACTTTACATCTCAGAAATTGTTCGATTGCATGGA T Y N A E K L A K L Y I S E I V R L H G L I M Q R S W P N F T S Q K L F D C M E D L - C R E V G Q T L H L R N C S I A W . . . . . . 61956 GTTCCACTTTCCATTATATCAAATAGGGGTACGCAGTTTACTTCTATGTTTTGGAAAACA V P L S I I S N R G T Q F T S M F W K T F H F P L Y Q I G V R S L L L C F G K H S S T F H Y I K - G Y A V Y F Y V L E N . 62016 TTGCATG L H C M I A Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-8_AGS-5_PPS_1 (61146 62021) (frame '1'; 876 bp, 292 residues) 1 KDLNLRQRRW MELLKDYDIT ILYHPGKANV VADALSRKAG SMGSLAHLQV SRRPLAREVQ 61 TLANDFMRLE VNGKGGFLAC VEARSSFLDK IKGKQFTDEK LIRIRDKVLR GEAKEAKIDE 121 EGVLRIKGRV CVPRVDDLIH TILTKAHSSR YSIHPGATKM YRDLKQHFLW SRMKRDIVDF 181 VAQCPNCQQV KYEHQRPGGT LQRMSIPEWK WERIAMDFVV GLPKTMGKYD SIWVIVDKLT 241 KSAHFIPVKV TYNAEKLAKL YISEIVRLHG VPLSIISNRG TQFTSMFWKT LH PGL 9 (+ strand): 62326 65378 AGS-1 (62326 62972,63148 63189) SCR (e 0.858 d 0.000 a 0.000,e 0.810) Exon 1 62326 62972 ( 647 n); score: 0.858 Intron 1 62973 63147 ( 175 n); Pd: 0.000 Pa: 0.000 Exon 2 63148 63189 ( 42 n); score: 0.810 PGS (62326 62972,63148 63189) SGN-U339540+ 3-phase translation of AGS-1 (+strand): . . . . . . 62326 TGAAATGCATACAAGAAAAGCTTTTAGCGGCTCAAAGTAGACAGGAAGAATATGCAGATC - N A Y K K S F - R L K V D R K N M Q I E M H T R K A F S G S K - T G R I C R S K C I Q E K L L A A Q S R Q E E Y A D . . . . . . 62386 GAAAGGTTAGAGACTTGGAGTTTATCGAGGGTGAACAAGTCTTGCTGAAGGTTTCACCCA E R L E T W S L S R V N K S C - R F H P K G - R L G V Y R G - T S L A E G F T H R K V R D L E F I E G E Q V L L K V S P . . . . . . 62446 TGAAAGGGGTGATGCGGTTCGGTAAGCGAGGTAAGCTTAGTCCGAGGTACATTGGTCCAT - K G - C G S V S E V S L V R G T L V H E R G D A V R - A R - A - S E V H W S I M K G V M R F G K R G K L S P R Y I G P . . . . . . 62506 TTGAAGTTCTGAAGCGCGTGGGGGAGGTAGCTTATGAATTAGCCTTGCCCCCAGGACTCT L K F - S A W G R - L M N - P C P Q D S - S S E A R G G G S L - I S L A P R T L F E V L K R V G E V A Y E L A L P P G L . . . . . . 62566 CAGGAGTGCACCTGGTATTTCATGTGTCTATGTTGAAAAGATACCACGGGGATGGAAACT Q E C T W Y F M C L C - K D T T G M E T R S A P G I S C V Y V E K I P R G W K L S G V H L V F H V S M L K R Y H G D G N . . . . . . 62626 ACATCATTCATTGGGATTCAGTTCTTCTTGATGAGAATTTATCTTATGAGGAGGAGTCTG T S F I G I Q F F L M R I Y L M R R S L H H S L G F S S S - - E F I L - G G V C Y I I H W D S V L L D E N L S Y E E E S . . . . . . 62686 TTGCTATTTTAGATAGAGAAGTCCGCAAGTTGAGGTCAAGGGAGATTGCATCCATCAAGG L L F - I E K S A S - G Q G R L H P S R C Y F R - R S P Q V E V K G D C I H Q G V A I L D R E V R K L R S R E I A S I K . . . . . . 62746 TTCAATGGAAGAATCGACCAATTGAAAAGTCCACTTGGGAGAAGGAGGCTGATATGCAAG F N G R I D Q L K S P L G R R R L I C K S M E E S T N - K V H L G E G G - Y A R V Q W K N R P I E K S T W E K E A D M Q . . . . . . 62806 AAAAATACCCACACCTGTTTACAGATTCAGGTACTCCTTTTCGCCCTTGTTTTTCTTCTT K N T H T C L Q I Q V L L F A L V F L L K I P T P V Y R F R Y S F S P L F F F L E K Y P H L F T D S G T P F R P C F S S . . . . . . 62866 GTGATCGTTCGGGGACAAACGATGGGTAAATTGGTATCTATTGTAACGACCTGTTAGTCG V I V R G Q T M G K L V S I V T T C - S - S F G D K R W V N W Y L L - R P V S R C D R S G T N D G - I G I Y C N D L L V . . . . . : . 62926 TTTTGAGCAGTAGAGTTTATTCTAGTAATAGTTGTCTGGGTCGACGG : GCAGCAGGACGGA F - A V E F I L V I V V W V D G : Q Q D G F E Q - S L F - - - L S G S T : G S R T D V L S S R V Y S S N S C L G R R : A A G R . . . 63161 CCGTCGCAGGCACGACGGGCCGTCACAGG P S Q A R R A V T R R R H D G P S Q T V A G T T G R H R Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-9_AGS-1_PPS_1 (62328 62894) (frame '0'; 564 bp, 188 residues) 1 KCIQEKLLAA QSRQEEYADR KVRDLEFIEG EQVLLKVSPM KGVMRFGKRG KLSPRYIGPF 61 EVLKRVGEVA YELALPPGLS GVHLVFHVSM LKRYHGDGNY IIHWDSVLLD ENLSYEEESV 121 AILDREVRKL RSREIASIKV QWKNRPIEKS TWEKEADMQE KYPHLFTDSG TPFRPCFSSC 181 DRSGTNDG- AGS-2 (62651 63643,65348 65378) SCR (e 0.845 d 0.000 a 0.000,e 0.710) Exon 1 62651 63643 ( 993 n); score: 0.845 Intron 1 63644 65347 (1704 n); Pd: 0.000 Pa: 0.000 Exon 2 65348 65378 ( 31 n); score: 0.710 PGS (62651 63432) SGN-U339541+ PGS (62977 63643,65348 65378) SGN-U335319+ PGS (62977 63607) SGN-U343842+ 3-phase translation of AGS-2 (+strand): . . . . . . 62651 TCTTGATGAGAATTTATCTTATGAGGAGGAGTCTGTTGCTATTTTAGATAGAGAAGTCCG S - - E F I L - G G V C C Y F R - R S P L D E N L S Y E E E S V A I L D R E V R L M R I Y L M R R S L L L F - I E K S . . . . . . 62711 CAAGTTGAGGTCAAGGGAGATTGCATCCATCAAGGTTCAATGGAAGAATCGACCAATTGA Q V E V K G D C I H Q G S M E E S T N - K L R S R E I A S I K V Q W K N R P I E A S - G Q G R L H P S R F N G R I D Q L . . . . . . 62771 AAAGTCCACTTGGGAGAAGGAGGCTGATATGCAAGAAAAATACCCACACCTGTTTACAGA K V H L G E G G - Y A R K I P T P V Y R K S T W E K E A D M Q E K Y P H L F T D K S P L G R R R L I C K K N T H T C L Q . . . . . . 62831 TTCAGGTACTCCTTTTCGCCCTTGTTTTTCTTCTTGTGATCGTTCGGGGACAAACGATGG F R Y S F S P L F F F L - S F G D K R W S G T P F R P C F S S C D R S G T N D G I Q V L L F A L V F L L V I V R G Q T M . . . . . . 62891 GTAAATTGGTATCTATTGTAACGACCTGTTAGTCGTTTTGAGCAGTAGAGTTTATTCTAG V N W Y L L - R P V S R F E Q - S L F - - I G I Y C N D L L V V L S S R V Y S S G K L V S I V T T C - S F - A V E F I L . . . . . . 62951 TAATAGTTGTCTGGGTCGACGGATCCCACGACGGACCGTCGAAGGGGTCTCGTTCCAAAA - - L S G S T D P T T D R R R G L V P K N S C L G R R I P R R T V E G V S F Q N V I V V W V D G S H D G P S K G S R S K . . . . . . 63011 CACTTAGATTCTAAAATTTTGGGTACTGAGAACAACTATCTGAACTTCGCGACGACATGG H L D S K I L G T E N N Y L N F A T T W T - I L K F W V L R T T I - T S R R H G T L R F - N F G Y - E Q L S E L R D D M . . . . . . 63071 CAGGACGGACCGTCGTGGGCACGATGGACCGTCACAGACCCTTTAATGAAATTCAGTCTC Q D G P S W A R W T V T D P L M K F S L R T D R R G H D G P S Q T L - - N S V S A G R T V V G T M D R H R P F N E I Q S . . . . . . 63131 TGAACTTTGTGACGGAAGCAGCAGGACGGACCGTCGCAGGCACGACGGGCCGTCACAGGC - T L - R K Q Q D G P S Q A R R A V T G E L C D G S S R T D R R R H D G P S Q A L N F V T E A A G R T V A G T T G R H R . . . . . . 63191 TGCGTAACCCTGACTGAGTCGGATTTCTGTTAAATGTTTTAAGGGGCGTTTTGGACTATT C V T L T E S D F C - M F - G A F W T I A - P - L S R I S V K C F K G R F G L F L R N P D - V G F L L N V L R G V L D Y . . . . . . 63251 CCTGCTTATAATTGTAAAGTTAGTGGGTTAATGTTAATAATTCAATTACTTGGGGGTTAA P A Y N C K V S G L M L I I Q L L G G - L L I I V K L V G - C - - F N Y L G V K S C L - L - S - W V N V N N S I T W G L . . . . . . 63311 AGGTGATAACCTTGAAATAAATAGTGGGTTACTTTTACCATCTTTTATACTTAATTATAT R - - P - N K - W V T F T I F Y T - L Y G D N L E I N S G L L L P S F I L N Y M K V I T L K - I V G Y F Y H L L Y L I I . . . . . . 63371 GGTAATTAGGGTAAAAGAAAAAGAGTTTGAATAAGGAAAAATAGAAAGAACAGAAGAGAG G N - G K R K R V - I R K N R K N R R E V I R V K E K E F E - G K I E R T E E R W - L G - K K K S L N K E K - K E Q K R . . . . . . 63431 GGACGAACGAGCGAGAGAAGATAGAACGAAGAGGAAAGCAAAGACCTTGAAGAGTAGCTT G R T S E R R - N E E E S K D L E E - L D E R A R E D R T K R K A K T L K S S L G T N E R E K I E R R G K Q R P - R V A . . . . . . 63491 GCGTGATCACGAATTCTTCGATGGAAGTAGGTTATGGTTTATGTTATTTCATAGTAAACT A - S R I L R W K - V M V Y V I S - - T R D H E F F D G S R L W F M L F H S K L C V I T N S S M E V G Y G L C Y F I V N . . . . . . 63551 CTTAATAGCGAATGATATGTATTGGGTAGTATTGTAAAGTCTTCTATATGCTTAATTGTA L N S E - Y V L G S I V K S S I C L I V L I A N D M Y W V V L - S L L Y A - L Y S - - R M I C I G - Y C K V F Y M L N C . . . . : . . 63611 TGCTTGCATGATGTGATTATGTAAGTGTAATGA : CATAGAGCATGTGGACATTATTCAATT C L H D V I M - V - - : H R A C G H Y S I A C M M - L C K C N D : I E H V D I I Q F M L A - C D Y V S V M : T - S M W T L F N . 65375 TCAA S Q F Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-9_AGS-2_PPS_1 (62652 62894) (frame '2'; 240 bp, 80 residues) 1 LDENLSYEEE SVAILDREVR KLRSREIASI KVQWKNRPIE KSTWEKEADM QEKYPHLFTD 61 SGTPFRPCFS SCDRSGTNDG - AGS-3 (63512 63809,63851 63963,64029 64761) SCR (e 0.891 d 0.000 a 0.000,e 0.752 d 0.000 a 0.000,e 0.766) Exon 1 63512 63809 ( 298 n); score: 0.891 Intron 1 63810 63850 ( 41 n); Pd: 0.000 Pa: 0.000 Exon 2 63851 63963 ( 113 n); score: 0.752 Intron 2 63964 64028 ( 65 n); Pd: 0.000 Pa: 0.000 Exon 3 64029 64761 ( 733 n); score: 0.766 PGS (63512 63809,63851 63963,64029 64491) SGN-U335080- PGS (64029 64761) SGN-U315285+ PGS (64354 64620) SGN-U335075+ PGS (64433 64586) SGN-U315283+ 3-phase translation of AGS-3 (+strand): . . . . . . 63512 TGGAAGTAGGTTATGGTTTATGTTATTTCATAGTAAACTCTTAATAGCGAATGATATGTA W K - V M V Y V I S - - T L N S E - Y V G S R L W F M L F H S K L L I A N D M Y E V G Y G L C Y F I V N S - - R M I C . . . . . . 63572 TTGGGTAGTATTGTAAAGTCTTCTATATGCTTAATTGTATGCTTGCATGATGTGATTATG L G S I V K S S I C L I V C L H D V I M W V V L - S L L Y A - L Y A C M M - L C I G - Y C K V F Y M L N C M L A - C D Y . . . . . . 63632 TAAGTGTAATGAGTTGGAAAGATGAGGTTGTGAAGCTTAAACCTAAAACCCTCTGTGTTA - V - - V G K M R L - S L N L K P S V L K C N E L E R - G C E A - T - N P L C - V S V M S W K D E V V K L K P K T L C V . . . . . . 63692 ATGATGATGCCTTGGTATAAAAGAAGGCTTGATGAACTAAAAGAATGAGGTTAGTGGATC M M M P W Y K R R L D E L K E - G - W I - - C L G I K E G L M N - K N E V S G S N D D A L V - K K A - - T K R M R L V D . . . . . . : 63752 AGGTGTCACGTTCCGACACCAGGATAGTAGTAGTGAATCGGGTGTCACGTTCCGACAC : AT R C H V P T P G - - - - I G C H V P T : H G V T F R H Q D S S S E S G V T F R H : I Q V S R S D T R I V V V N R V S R S D T : . . . . . . 63853 AGTAATAGTGGATCGGGTGTCACGTTCTGACACCAAGATACTAGTAATGGATCGGGTGTC S N S G S G V T F - H Q D T S N G S G V V I V D R V S R S D T K I L V M D R V S - - - W I G C H V L T P R Y - - W I G C . . . . . . : 63913 ACGTTCCGACACCAGGATAGTAGTAATGGATCGGGTATCACGTTCCGACAC : GATAGTAGT T F R H Q D S S N G S G I T F R H : D S S R S D T R I V V M D R V S R S D T : I V V H V P T P G - - - W I G Y H V P T : R - - . . . . . . 64038 AGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGTAAAAAGAATGAATCTTGAATCAT R G S E C H V P T P G - - K E - I L N H E D R S V T F R H Q D S K K N E S - I M - R I G V S R S D T R I V K R M N L E S . . . . . . 64098 GTTAATATACTCAGGTTTAAAGAAACTATTTCCCAAACGAGTATGGTGTGGAGGCGTGAG V N I L R F K E T I S Q T S M V W R R E L I Y S G L K K L F P K R V W C G G V S C - Y T Q V - R N Y F P N E Y G V E A - . . . . . . 64158 TACTCATGGATGCGCTTGGGTTGTGGCCAATGGTTATGGTACTTGTTGTTGTTGTCTGTT Y S W M R L G C G Q W L W Y L L L L S V T H G C A W V V A N G Y G T C C C C L L V L M D A L G L W P M V M V L V V V V C . . . . . . 64218 GAGTATTGTAGTTGATTTTATGTTATTATCTGATATATGTTATTTTCTATTTTGAGTTGG E Y C S - F Y V I I - Y M L F S I L S W S I V V D F M L L S D I C Y F L F - V G - V L - L I L C Y Y L I Y V I F Y F E L . . . . . . 64278 CCGATGATACCTACTCAGTACTTGTGCCTTGTACTGACCCCTACTTGTATGTTTCTTTCT P M I P T Q Y L C L V L T P T C M F L S R - Y L L S T C A L Y - P L L V C F F L A D D T Y S V L V P C T D P Y L Y V S F . . . . . . 64338 TGTTATTTTTGGAGTGCAGCAAACGTGCCATCGACTTCGACTCAACCGCAACTCTAGCCA C Y F W S A A N V P S T S T Q P Q L - P V I F G V Q Q T C H R L R L N R N S S Q L L F L E C S K R A I D F D S T A T L A . . . . . . 64398 GACTTCAGCATAATCAGATTTCAGGGTGAGCTATTGTTCCTAGTTCGGACTGGATTCTTT D F S I I R F Q G E L L F L V R T G F F T S A - S D F R V S Y C S - F G L D S F R L Q H N Q I S G - A I V P S S D W I L . . . . . . 64458 CCTTCGCGTCTTGATGTCTTGAAGTTCGGACATGGACCATCTCTTTTACTTATTTTAGCT P S R L D V L K F G H G P S L L L I L A L R V L M S - S S D M D H L F Y L F - L S F A S - C L E V R T W T I S F T Y F S . . . . . . 64518 TCTTAGATACTCTTAGATTTAGTAATTTGAGGATAGATGTTCTTGTGATGATGACTTCCA S - I L L D L V I - G - M F L - - - L P L R Y S - I - - F E D R C S C D D D F Q F L D T L R F S N L R I D V L V M M T S . . . . . . 64578 GATTTTGGGGATAATGATAAGTTTTGAGTTTTAGAAGTTAATTGTTGATTTCGTTAATGA D F G D N D K F - V L E V N C - F R - - I L G I M I S F E F - K L I V D F V N E R F W G - - - V L S F R S - L L I S L M . . . . . . 64638 GTTTTAAGTCTTCCGCATTATATTCTATTTATTATCGTTGAATTGTTTGGGTTTAGATTG V L S L P H Y I L F I I V E L F G F R L F - V F R I I F Y L L S L N C L G L D W S F K S S A L Y S I Y Y R - I V W V - I . . . . . . 64698 GTTTGTTCGCTCACATAGGAGGGTAAGTATGGGTGCCACTCGCGGCCTGTTTTGGGTCGT V C S L T - E G K Y G C H S R P V L G R F V R S H R R V S M G A T R G L F W V V G L F A H I G G - V W V P L A A C F G S . 64758 GACA D T - Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-9_AGS-3_PPS_1 (63732 63809,63851 63963,64029 64092) (frame '2'; 252 bp, 84 residues) 1 KNEVSGSGVT FRHQDSSSES GVTFRHIVIV DRVSRSDTKI LVMDRVSRSD TRIVVMDRVS 61 RSDTIVVEDR SVTFRHQDSK KNES- >C08HBa0294K15.1+_PGL-9_AGS-3_PPS_2 (64229 64426) (frame '0'; 195 bp, 65 residues) 1 LILCYYLIYV IFYFELADDT YSVLVPCTDP YLYVSFLLFL ECSKRAIDFD STATLARLQH 61 NQISG- AGS-4 (63684 63973,64034 64422) SCR (e 0.848 d 0.000 a 0.000,e 0.724) Exon 1 63684 63973 ( 290 n); score: 0.848 Intron 1 63974 64033 ( 60 n); Pd: 0.000 Pa: 0.000 Exon 2 64034 64422 ( 389 n); score: 0.724 PGS (63684 63973,64034 64422) SGN-U335078+ 3-phase translation of AGS-4 (+strand): . . . . . . 63684 CTGTGTTAATGATGATGCCTTGGTATAAAAGAAGGCTTGATGAACTAAAAGAATGAGGTT L C - - - C L G I K E G L M N - K N E V C V N D D A L V - K K A - - T K R M R L V L M M M P W Y K R R L D E L K E - G . . . . . . 63744 AGTGGATCAGGTGTCACGTTCCGACACCAGGATAGTAGTAGTGAATCGGGTGTCACGTTC S G S G V T F R H Q D S S S E S G V T F V D Q V S R S D T R I V V V N R V S R S - W I R C H V P T P G - - - - I G C H V . . . . . . 63804 CGACACTAGGATAGTAATAGTGGATCGGGTCACGTTCCGACACCAGGATAGTAATAGTGG R H - D S N S G S G H V P T P G - - - W D T R I V I V D R V T F R H Q D S N S G P T L G - - - W I G S R S D T R I V I V . . . . . . 63864 ATCGGGTGTCACGTTCTGACACCAAGATACTAGTAATGGATCGGGTGTCACGTTCCGACA I G C H V L T P R Y - - W I G C H V P T S G V T F - H Q D T S N G S G V T F R H D R V S R S D T K I L V M D R V S R S D . . . . . : . 63924 CCAGGATAGTAGTAATGGATCGGGTATCACGTTCCGACACCAGGATAGTA : TAGTAGAGGA P G - - - W I G Y H V P T P G - Y : S R G Q D S S N G S G I T F R H Q D S : I V E D T R I V V M D R V S R S D T R I V : - - R . . . . . . 64044 TCGGAGTGTCACGTTCCGACACCAGGATAGTAAAAAGAATGAATCTTGAATCATGTTAAT S E C H V P T P G - - K E - I L N H V N R S V T F R H Q D S K K N E S - I M L I I G V S R S D T R I V K R M N L E S C - . . . . . . 64104 ATACTCAGGTTTAAAGAAACTATTTCCCAAACGAGTATGGTGTGGAGGCGTGAGTACTCA I L R F K E T I S Q T S M V W R R E Y S Y S G L K K L F P K R V W C G G V S T H Y T Q V - R N Y F P N E Y G V E A - V L . . . . . . 64164 TGGATGCGCTTGGGTTGTGGCCAATGGTTATGGTACTTGTTGTTGTTGTCTGTTGAGTAT W M R L G C G Q W L W Y L L L L S V E Y G C A W V V A N G Y G T C C C C L L S I M D A L G L W P M V M V L V V V V C - V . . . . . . 64224 TGTAGTTGATTTTATGTTATTATCTGATATATGTTATTTTCTATTTTGAGTTGGCCGATG C S - F Y V I I - Y M L F S I L S W P M V V D F M L L S D I C Y F L F - V G R - L - L I L C Y Y L I Y V I F Y F E L A D . . . . . . 64284 ATACCTACTCAGTACTTGTGCCTTGTACTGACCCCTACTTGTATGTTTCTTTCTTGTTAT I P T Q Y L C L V L T P T C M F L S C Y Y L L S T C A L Y - P L L V C F F L V I D T Y S V L V P C T D P Y L Y V S F L L . . . . . . 64344 TTTTGGAGTGCAGCAAACGTGCCATCGACTTCGACTCAACCGCAACTCTAGCCAGACTTC F W S A A N V P S T S T Q P Q L - P D F F G V Q Q T C H R L R L N R N S S Q T S F L E C S K R A I D F D S T A T L A R L . . 64404 AGCATAATCAGATTTCAGG S I I R F Q A - S D F R Q H N Q I S Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-9_AGS-4_PPS_1 (64229 64420) (frame '0'; 192 bp, 64 residues) 1 LILCYYLIYV IFYFELADDT YSVLVPCTDP YLYVSFLLFL ECSKRAIDFD STATLARLQH 61 NQIS AGS-5 (63747 63966,64029 64597) SCR (e 0.736 d 0.000 a 0.000,e 0.776) Exon 1 63747 63966 ( 220 n); score: 0.736 Intron 1 63967 64028 ( 62 n); Pd: 0.000 Pa: 0.000 Exon 2 64029 64597 ( 569 n); score: 0.776 PGS (63747 63966,64029 64597) SGN-U335071- 3-phase translation of AGS-5 (+strand): . . . . . . 63747 GGATCAGGTGTCACGTTCCGACACCAGGATAGTAGTAGTGAATCGGGTGTCACGTTCCGA G S G V T F R H Q D S S S E S G V T F R D Q V S R S D T R I V V V N R V S R S D I R C H V P T P G - - - - I G C H V P . . . . . . 63807 CACTAGGATAGTAATAGTGGATCGGGTCACGTTCCGACACCAGGATAGTAATAGTGGATC H - D S N S G S G H V P T P G - - - W I T R I V I V D R V T F R H Q D S N S G S T L G - - - W I G S R S D T R I V I V D . . . . . . 63867 GGGTGTCACGTTCTGACACCAAGATACTAGTAATGGATCGGGTGTCACGTTCCGACACCA G C H V L T P R Y - - W I G C H V P T P G V T F - H Q D T S N G S G V T F R H Q R V S R S D T K I L V M D R V S R S D T . . . . : . . 63927 GGATAGTAGTAATGGATCGGGTATCACGTTCCGACACCAG : GATAGTAGTAGAGGATCGGA G - - - W I G Y H V P T P : G - - - R I G D S S N G S G I T F R H Q : D S S R G S E R I V V M D R V S R S D T R : I V V E D R . . . . . . 64049 GTGTCACGTTCCGACACCAGGATAGTAAAAAGAATGAATCTTGAATCATGTTAATATACT V S R S D T R I V K R M N L E S C - Y T C H V P T P G - - K E - I L N H V N I L S V T F R H Q D S K K N E S - I M L I Y . . . . . . 64109 CAGGTTTAAAGAAACTATTTCCCAAACGAGTATGGTGTGGAGGCGTGAGTACTCATGGAT Q V - R N Y F P N E Y G V E A - V L M D R F K E T I S Q T S M V W R R E Y S W M S G L K K L F P K R V W C G G V S T H G . . . . . . 64169 GCGCTTGGGTTGTGGCCAATGGTTATGGTACTTGTTGTTGTTGTCTGTTGAGTATTGTAG A L G L W P M V M V L V V V V C - V L - R L G C G Q W L W Y L L L L S V E Y C S C A W V V A N G Y G T C C C C L L S I V . . . . . . 64229 TTGATTTTATGTTATTATCTGATATATGTTATTTTCTATTTTGAGTTGGCCGATGATACC L I L C Y Y L I Y V I F Y F E L A D D T - F Y V I I - Y M L F S I L S W P M I P V D F M L L S D I C Y F L F - V G R - Y . . . . . . 64289 TACTCAGTACTTGTGCCTTGTACTGACCCCTACTTGTATGTTTCTTTCTTGTTATTTTTG Y S V L V P C T D P Y L Y V S F L L F L T Q Y L C L V L T P T C M F L S C Y F W L L S T C A L Y - P L L V C F F L V I F . . . . . . 64349 GAGTGCAGCAAACGTGCCATCGACTTCGACTCAACCGCAACTCTAGCCAGACTTCAGCAT E C S K R A I D F D S T A T L A R L Q H S A A N V P S T S T Q P Q L - P D F S I G V Q Q T C H R L R L N R N S S Q T S A . . . . . . 64409 AATCAGATTTCAGGGTGAGCTATTGTTCCTAGTTCGGACTGGATTCTTTCCTTCGCGTCT N Q I S G - A I V P S S D W I L S F A S I R F Q G E L L F L V R T G F F P S R L - S D F R V S Y C S - F G L D S F L R V . . . . . . 64469 TGATGTCTTGAAGTTCGGACATGGACCATCTCTTTTACTTATTTTAGCTTCTTAGATACT - C L E V R T W T I S F T Y F S F L D T D V L K F G H G P S L L L I L A S - I L L M S - S S D M D H L F Y L F - L L R Y . . . . . . 64529 CTTAGATTTAGTAATTTGAGGATAGATGTTCTTGTGATGATGACTTCCAGATTTTGGGGA L R F S N L R I D V L V M M T S R F W G L D L V I - G - M F L - - - L P D F G D S - I - - F E D R C S C D D D F Q I L G . 64589 TAATGATAA - - - N D I M I Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-9_AGS-5_PPS_1 (63824 63966,64029 64092) (frame '0'; 204 bp, 68 residues) 1 WIGSRSDTRI VIVDRVSRSD TKILVMDRVS RSDTRIVVMD RVSRSDTRIV VEDRSVTFRH 61 QDSKKNES- >C08HBa0294K15.1+_PGL-9_AGS-5_PPS_2 (64229 64426) (frame '1'; 195 bp, 65 residues) 1 LILCYYLIYV IFYFELADDT YSVLVPCTDP YLYVSFLLFL ECSKRAIDFD STATLARLQH 61 NQISG- AGS-6 (64830 65006) SCR (e 0.890) Exon 1 64830 65006 ( 177 n); score: 0.890 PGS (64830 65006) SGN-U324134- 3-phase translation of AGS-6 (+strand): . . . . . . 64830 TATCGGTTAACCCGTTAAGAAAAAACTTCAAACCGTTAAGAACCGATAACCCGATAACAA Y R L T R - E K T S N R - E P I T R - Q I G - P V K K K L Q T V K N R - P D N K S V N P L R K N F K P L R T D N P I T . . . . . . 64890 AAAAATCAAAACCGTTATTAAAACCACTAAACTAATAACCCAATACTATAAACCAATAAC K N Q N R Y - N H - T N N P I L - T N N K I K T V I K T T K L I T Q Y Y K P I T K K S K P L L K P L N - - P N T I N Q - . . . . . . 64950 TTTTTTATCGATTCGGCTTATCGGTTTCGATTCGATTTTGAACTGCCCTATGGACGT F F I D S A Y R F R F D F E L P Y G R F L S I R L I G F D S I L N C P M D L F Y R F G L S V S I R F - T A L W T Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-6 (-strand): . . . . . . 65006 ACGTCCATAGGGCAGTTCAAAATCGAATCGAAACCGATAAGCCGAATCGATAAAAAAGTT T S I G Q F K I E S K P I S R I D K K V R P - G S S K S N R N R - A E S I K K L V H R A V Q N R I E T D K P N R - K S . . . . . . 64946 ATTGGTTTATAGTATTGGGTTATTAGTTTAGTGGTTTTAATAACGGTTTTGATTTTTTTG I G L - Y W V I S L V V L I T V L I F L L V Y S I G L L V - W F - - R F - F F C Y W F I V L G Y - F S G F N N G F D F F . . . . . . 64886 TTATCGGGTTATCGGTTCTTAACGGTTTGAAGTTTTTTCTTAACGGGTTAACCGATA L S G Y R F L T V - S F F L T G - P I Y R V I G S - R F E V F S - R V N R V I G L S V L N G L K F F L N G L T D Maximal non-overlapping open reading frames (>= 64 codons): none PGL 10 (+ strand): 71287 72142 AGS-1 (71287 72142) SCR (e 0.921) Exon 1 71287 72142 ( 856 n); score: 0.921 PGS (71287 71611) SGN-U312573+ PGS (71509 72142) SGN-U332756+ 3-phase translation of AGS-1 (+strand): . . . . . . 71287 AACACTTTGTTTGTTCAAAAGTCATTCCTATTAGACACAAAATACTGACATGGCAAAAAA N T L F V Q K S F L L D T K Y - H G K K T L C L F K S H S Y - T Q N T D M A K N H F V C S K V I P I R H K I L T W Q K . . . . . . 71347 CGTGTAATTCACTTTCCTTGAGCGCGTTAATTTATTAAAAGTAATATTTTTCTTTTTTTT R V I H F P - A R - F I K S N I F L F F V - F T F L E R V N L L K V I F F F F F T C N S L S L S A L I Y - K - Y F S F F . . . . . . 71407 CTCTTAATTTATACCCCTAAGTTAATTTTTTTAAAAAAATTAACAAAAAAGAAGAAGAAC L L I Y T P K L I F L K K L T K K K K N S - F I P L S - F F - K N - Q K R R R T S L N L Y P - V N F F K K I N K K E E E . . . . . . 71467 TGTTGTCTTCTTCTTCTTCTTCCCTATTTCTATCAACCCCACCCCAACCCAACCCCCATA C C L L L L L P Y F Y Q P H P N P T P I V V F F F F F P I S I N P T P T Q P P Y L L S S S S S S L F L S T P P Q P N P H . . . . . . 71527 CCCATACACCAGTGGTTATCTTCTTCCCCCATCATTCTAATGATTTCAAAATTCTTAGTA P I H Q W L S S S P I I L M I S K F L V P Y T S G Y L L P P S F - - F Q N S - Y T H T P V V I F F P H H S N D F K I L S . . . . . . 71587 TCAGTGGTTATATTCTTCCCCCACCATTCTAATGGTTTCAAAATTCTTAGCATTTTGTTT S V V I F F P H H S N G F K I L S I L F Q W L Y S S P T I L M V S K F L A F C F I S G Y I L P P P F - W F Q N S - H F V . . . . . . 71647 CATTTATAAATTTTTTGAAGAGATTCTTTTCCCATTCTTTCTCTACCTAAAAAACGAGAT H L - I F - R D S F P I L S L P K K R D I Y K F F E E I L F P F F L Y L K N E M S F I N F L K R F F S H S F S T - K T R . . . . . . 71707 GAAGTAAAAAGTTATAATTAATAAAAAAGCTGATGAAAAAAAAATTGTCGGATTAAAGAT E V K S Y N - - K S - - K K N C R I K D K - K V I I N K K A D E K K I V G L K M - S K K L - L I K K L M K K K L S D - R . . . . . . 71767 GGAACCGTATAGGGAGGGGAGGGTAGCCATTAATGGAGTTAGGGGAAATGTATGTTTTGT G T V - G G E G S H - W S - G K C M F C E P Y R E G R V A I N G V R G N V C F V W N R I G R G G - P L M E L G E M Y V L . . . . . . 71827 TCCAGTTGAAGGCAGGGAAGTTTAGGTTTTACTTTTTTTTTCATTTTTTTACTTTAAAAT S S - R Q G S L G F T F F F I F L L - N P V E G R E V - V L L F F S F F Y F K I F Q L K A G K F R F Y F F F H F F T L K . . . . . . 71887 AATTTTTATTTTTTTTACTTTATAATATAATGTGTAAATAATTTTTTGGATTAAAAATAA N F Y F F Y F I I - C V N N F L D - K - I F I F F T L - Y N V - I I F W I K N N - F L F F L L Y N I M C K - F F G L K I . . . . . . 71947 CACATGTCATTATTTCATTGGTCAAATTGACATGTCAGCGAGTGTATTTCACACATCCTC H M S L F H W S N - H V S E C I S H I L T C H Y F I G Q I D M S A S V F H T S S T H V I I S L V K L T C Q R V Y F T H P . . . . . . 72007 TATTTTTTGTTTATTCTCGAAAAAATGTTCAAATCGTTCAAATTCAGAATGGTTGAAGTG Y F L F I L E K M F K S F K F R M V E V I F C L F S K K C S N R S N S E W L K C L F F V Y S R K N V Q I V Q I Q N G - S . . . . . . 72067 TTCAATAGATCGTACGTCTAGTTGAGGTGTCTAAATGAGTAATCGGGACAAGTTTGAGTG F N R S Y V - L R C L N E - S G Q V - V S I D R T S S - G V - M S N R D K F E W V Q - I V R L V E V S K - V I G T S L S . . 72127 GCCGCATATGACTTTG A A Y D F P H M T L G R I - L Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-10_AGS-1_PPS_1 (71377 71655) (frame '1'; 276 bp, 92 residues) 1 FIKSNIFLFF LLIYTPKLIF LKKLTKKKKN CCLLLLLPYF YQPHPNPTPI PIHQWLSSSP 61 IILMISKFLV SVVIFFPHHS NGFKILSILF HL- 3-phase translation of AGS-1 (-strand): . . . . . . 72142 CAAAGTCATATGCGGCCACTCAAACTTGTCCCGATTACTCATTTAGACACCTCAACTAGA Q S H M R P L K L V P I T H L D T S T R K V I C G H S N L S R L L I - T P Q L D K S Y A A T Q T C P D Y S F R H L N - . . . . . . 72082 CGTACGATCTATTGAACACTTCAACCATTCTGAATTTGAACGATTTGAACATTTTTTCGA R T I Y - T L Q P F - I - T I - T F F R V R S I E H F N H S E F E R F E H F F E T Y D L L N T S T I L N L N D L N I F S . . . . . . 72022 GAATAAACAAAAAATAGAGGATGTGTGAAATACACTCGCTGACATGTCAATTTGACCAAT E - T K N R G C V K Y T R - H V N L T N N K Q K I E D V - N T L A D M S I - P M R I N K K - R M C E I H S L T C Q F D Q . . . . . . 71962 GAAATAATGACATGTGTTATTTTTAATCCAAAAAATTATTTACACATTATATTATAAAGT E I M T C V I F N P K N Y L H I I L - S K - - H V L F L I Q K I I Y T L Y Y K V - N N D M C Y F - S K K L F T H Y I I K . . . . . . 71902 AAAAAAAATAAAAATTATTTTAAAGTAAAAAAATGAAAAAAAAAGTAAAACCTAAACTTC K K N K N Y F K V K K - K K K - N L N F K K I K I I L K - K N E K K S K T - T S - K K - K L F - S K K M K K K V K P K L . . . . . . 71842 CCTGCCTTCAACTGGAACAAAACATACATTTCCCCTAACTCCATTAATGGCTACCCTCCC P A F N W N K T Y I S P N S I N G Y P P L P S T G T K H T F P L T P L M A T L P P C L Q L E Q N I H F P - L H - W L P S . . . . . . 71782 CTCCCTATACGGTTCCATCTTTAATCCGACAATTTTTTTTTCATCAGCTTTTTTATTAAT L P I R F H L - S D N F F F I S F F I N S L Y G S I F N P T I F F S S A F L L I P P Y T V P S L I R Q F F F H Q L F Y - . . . . . . 71722 TATAACTTTTTACTTCATCTCGTTTTTTAGGTAGAGAAAGAATGGGAAAAGAATCTCTTC Y N F L L H L V F - V E K E W E K N L F I T F Y F I S F F R - R K N G K R I S S L - L F T S S R F L G R E R M G K E S L . . . . . . 71662 AAAAAATTTATAAATGAAACAAAATGCTAAGAATTTTGAAACCATTAGAATGGTGGGGGA K K F I N E T K C - E F - N H - N G G G K N L - M K Q N A K N F E T I R M V G E Q K I Y K - N K M L R I L K P L E W W G . . . . . . 71602 AGAATATAACCACTGATACTAAGAATTTTGAAATCATTAGAATGATGGGGGAAGAAGATA R I - P L I L R I L K S L E - W G K K I E Y N H - Y - E F - N H - N D G G R R - K N I T T D T K N F E I I R M M G E E D . . . . . . 71542 ACCACTGGTGTATGGGTATGGGGGTTGGGTTGGGGTGGGGTTGATAGAAATAGGGAAGAA T T G V W V W G L G W G G V D R N R E E P L V Y G Y G G W V G V G L I E I G K K N H W C M G M G V G L G W G - - K - G R . . . . . . 71482 GAAGAAGAAGACAACAGTTCTTCTTCTTTTTTGTTAATTTTTTTAAAAAAATTAACTTAG E E E D N S S S S F L L I F L K K L T - K K K T T V L L L F C - F F - K N - L R R R R R Q Q F F F F F V N F F K K I N L . . . . . . 71422 GGGTATAAATTAAGAGAAAAAAAAGAAAAATATTACTTTTAATAAATTAACGCGCTCAAG G Y K L R E K K E K Y Y F - - I N A L K G I N - E K K K K N I T F N K L T R S R G V - I K R K K R K I L L L I N - R A Q . . . . . . 71362 GAAAGTGAATTACACGTTTTTTGCCATGTCAGTATTTTGTGTCTAATAGGAATGACTTTT E S E L H V F C H V S I L C L I G M T F K V N Y T F F A M S V F C V - - E - L L G K - I T R F L P C Q Y F V S N R N D F . . 71302 GAACAAACAAAGTGTT E Q T K C N K Q S V - T N K V Maximal non-overlapping open reading frames (>= 64 codons): none ... finished at: Tue Jul 25 12:14:34 2006