GeneSeqer. Version of March 12, 2006. Date run: Mon Aug 28 22:48:00 2006 (Bayesian) Splice site model (species): Arabidopsis thaliana Fast search parameters: MinMatchLen 16, MinQualityHSP 30, MinQualityCHAIN 50. Total number of ESTs: 175665 Total sequence length: 93213537 Minimum sequence length: 89 Maximum sequence length: 1082 Length distribution (number of sequences of specified length): < 100: 1 < 200: 2188 < 300: 8544 < 400: 20465 < 500: 39499 < 600: 49432 < 700: 32872 < 800: 19308 < 900: 3155 < 1000: 193 >=1000: 8 Input file : /tmp/bac-submission-temp-IH8AK/C08HBa0294K15/C08HBa0294K15.seq.screen ________________________________________________________________________________ Sequence 1: C08HBa0294K15.1, from 1 to 72577, both strands analyzed. ... started at: Mon Aug 28 23:09:55 2006 EST library file: /tmp/cxgn-bacpublish-resources-QzKMbr/sgn_ests; matching gDNA +strand ... ... found all matches, elapsed seconds = 5 ... matches indexed, elapsed seconds = 5 HitsTableSize = 71 EST library file: /tmp/cxgn-bacpublish-resources-QzKMbr/sgn_ests; matching gDNA -strand ... ... found all matches, elapsed seconds = 4 ... matches indexed, elapsed seconds = 4 HitsTableSize = 89 ******************************************************************************** EST sequence 29 -strand 390 n (File: SGN-E242274-) 1 AATTAATTCA AGGTTATCTC CTTCAACCCC CCAAGTAATT GAATTATTAA CATTAAACCA 61 CTAATTTCAT AATTATAAGC AGGAATAGTC CAAAACGCCC CTTAAAACAT TTAACAAAAA 121 TCCGACCCAG TCAGGGTTAC GCAGTCTGTG ACGACCAGTC GTGCCTGCGA CGGTCCGTCC 181 TGCTGCTTCC GTCACAAAGT TCAGAGATTA AATTTCACTA AGGGTTTGTG ACAGCCCGTC 241 ATGCCTGTGA CGGTCCGTCG TGCCATTTCG TCGCGAAGTT CAGAGAGTCG ATCTCAGTAC 301 CCAAATTTCA GAATTCTAAG TGTTTTGGAA CGAGACACCC TCCACGGTCC GTCGTGCTCA 361 TGACGGTCCG TCGTGGGATC CGTCGACTCA Predicted gene structure (within gDNA segment 3907 to 1): Exon 1 2970 2582 ( 389 n); cDNA 3 390 ( 388 n); score: 0.837 MATCH C08HBa0294K15.1- SGN-E242274- 0.837 389 0.997 C PGS_C08HBa0294K15.1-_SGN-E242274- (2970 2582) Alignment (genomic DNA sequence = upper lines): TTATTCCAAG GTTGTCTTCT TTAA-CCCCC AAGAAATTGA ATTATTAACA TTAAACCACT 2912 ||| | |||| ||| ||| || | || ||||| ||| |||||| |||||||||| |||||||||| TTAATTCAAG GTTATCTCCT TCAACCCCCC AAGTAATTGA ATTATTAACA TTAAACCACT 62 AACCTTATAA TCATAAGCAG GAATAGTCCA AAACACCCCT TAAAAAATTT TAACAGAAAT 2852 || | |||| | |||||||| |||||||||| |||| ||||| ||||| | || ||||| |||| AATTTCATAA TTATAAGCAG GAATAGTCCA AAACGCCCCT TAAAACA-TT TAACAAAAAT 121 CCGACCCAGT CAGGGTTACT CAGTCTGTGA CGGTCCGTCG TGCCTGCGAT AGTCCGTCCT 2792 |||||||||| ||||||||| |||||||||| || | |||| ||||||||| ||||||||| CCGACCCAGT CAGGGTTACG CAGTCTGTGA CGACCAGTCG TGCCTGCGAC GGTCCGTCCT 181 GCTAAGT-CG TTACAGAGTT CAGAGACTCA ATTTTTATTT AAGACCATGT GACGGTCCGT 2733 ||| | || | ||| |||| |||||| | | | ||| | | ||| ||| ||| | |||| GCTGCTTCCG TCACAAAGTT CAGAGA-TTA AATTTCA-CT AAGGGTTTGT GACAGCCCGT 239 CGTGCCTACG ACGGTCCGTC CTGCTCTTCC GTTGCGAAGT TCAGAGAGTT GTTCTCAGTA 2673 | ||||| | |||||||||| ||| || | || ||||||| ||||||||| | |||||||| CATGCCTGTG ACGGTCCGTC GTGCCATTTC GTCGCGAAGT TCAGAGAGTC GATCTCAGTA 299 CCCAATTTTT CAGAA-ACTA AGTATTTTGG AACGAGACCC CCTCGACGGT CCGTCGTGCC 2614 ||||| ||| ||||| ||| ||| |||||| |||||||| | |||| ||||| ||||||||| CCCAA-ATTT CAGAATTCTA AGTGTTTTGG AACGAGACAC CCTCCACGGT CCGTCGTGCT 358 CATGACGGTC CGTCGTGGGA TCCGTCAACC CA 2582 |||||||||| |||||||||| |||||| || || CATGACGGTC CGTCGTGGGA TCCGTCGACT CA 390 hqPGS_C08HBa0294K15.1-_SGN-E242274- (2970 2582) ******************************************************************************** EST sequence 4 -strand 605 n (File: SGN-E347579-) 1 ATCCCCTAAT TCTACGTGTC GGTTCGTGAC ACCCGATCCC CTAATTCTAC GTGTCGGTTC 61 GTGACACCTG ATCCCCTAAT CTACGTGCCG GTTCGTGACA CCCGATCCCC TAATTCTACG 121 TGCCAGTTCG TGACACCCGA TCCCCTAATT CTACGTGTCG GTTCGTGACA CCCGATCCCC 181 TGCATGTGTC GGTACGTGAC ACTCCGATCC ACTAATATCA TTCTGTAAAT CATCAGGCCT 241 TCTCTATACC AAGGCATCAT CAATCCCATT ACTTTTATTC ATCAAGCCTT CTTCTATACC 301 AAGGCATCAT CATTAATAAG AGATTAGATT TTTATCAAGA TTTGGGATTC AATAACTTCA 361 TCATGCTTAA TATAATCACA ATTATATAAT CACGTTCATG CATGCATACA ATTAAGCATA 421 TAGCAGGGTT TACAATACTA CCAATACATA TCATTCTCTA TTAAGAGTTT ACTATGAAAG 481 CATGAAAACC ATAACCTACC TCCACCGAAG ATTAGTGATC AAGCAAGCAA ATTTTTCTCC 541 AAGCTTTGTT TCTCCCTTCT CGTTCGATTC TTCCTCTCTC TCTTGTTCTT TCTATTTTCT 601 TTATT Predicted gene structure (within gDNA segment 6755 to 1548): Exon 1 3375 3140 ( 236 n); cDNA 278 521 ( 244 n); score: 0.775 MATCH C08HBa0294K15.1- SGN-E347579- 0.775 236 0.390 C PGS_C08HBa0294K15.1-_SGN-E347579- (3375 3140) Alignment (genomic DNA sequence = upper lines): TTCATCAAGC CTTCTTTTAT ACCAAGGCAT CATCATTAAC AA-AGA--GG ---TCT-T-A 3324 |||||||||| |||||| ||| |||||||||| ||||||||| || ||| | | | | | TTCATCAAGC CTTCTTCTAT ACCAAGGCAT CATCATTAAT AAGAGATTAG ATTTTTATCA 337 AGGTTTAAGA TTCAATAGCC TCATCATGCT T-ATTTTATC ACAATTATAT AATCACGT-C 3266 || ||| || ||||||| | |||||||||| | || | ||| |||||||||| |||||||| | AGATTTGGGA TTCAATAACT TCATCATGCT TAATATAATC ACAATTATAT AATCACGTTC 397 ATGCAAGCAC ACAATTAAGC ATATAGAAGA CTTTACAATA CTACCCAACA CATATCATTC 3206 ||||| ||| |||||||||| |||||| || ||||||||| ||| |||| | |||||||||| ATGCATGCAT ACAATTAAGC ATATAGCAGG GTTTACAATA CTA-CCAATA CATATCATTC 456 GCTATTAAGA GTTTACTATG AAATAGCATA AACCATAACC TACCTCCAGC GAAGAATTCG 3146 ||||||||| |||||||||| ||| | |||||||||| |||||||| | |||| ||| | TCTATTAAGA GTTTACTATG AAAGCATGAA AACCATAACC TACCTCCACC GAAG-ATTAG 515 TGATCA 3140 |||||| TGATCA 521 hqPGS_C08HBa0294K15.1-_SGN-E347579- (3375 3140) ******************************************************************************** EST sequence 20 +strand 402 n (File: SGN-E352844+) 1 GGAGTGTCTT AGGTGCCTTA AACACCTTCC TAAGACGCTA ATAAGAATCC CGAATCCTAA 61 AAAATATTTT CAAAACGACT TTTCTGTTTA AATTGTTTTG AGAATGAGTT TTCTTGATTT 121 TTCTTAAAAA TTAAGTGGCG ACTCCTAAAG TCGAAAAATA CTTTAAAATA AAACAAACTC 181 TTTTCGAAAA ATCACCTTTT TTCGATAAAA CAAAGCTTCT AGCTTGGACT GGATCTTCTT 241 CTTCATGTCT TGATGCCTTG AAGTTCCGGC ATGGACTAGC TGTTTATGTA TTTTAGCTTC 301 TTAGATACTC TTAGATTTAG TAATTCGAAG TAGATGTTCT TGTGATGATA ACTTCCAGAT 361 TTTGGGAAAT AATAGTTATT GAATTGGTTT TTATAAAAAA AA Predicted gene structure (within gDNA segment 487 to 5015): Exon 1 3022 3031 ( 10 n); cDNA 206 215 ( 10 n); score: 1.000 Intron 1 3032 3892 ( 861 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.80) Exon 2 3893 4063 ( 171 n); cDNA 216 382 ( 167 n); score: 0.842 Intron 2 4064 4152 ( 89 n); Pd: 0.000 (s: 0.86), Pa: 0.994 (s: 0) Exon 3 4153 4159 ( 7 n); cDNA 383 389 ( 7 n); score: 1.000 MATCH C08HBa0294K15.1+ SGN-E352844+ 0.842 188 0.468 C PGS_C08HBa0294K15.1+_SGN-E352844+ (3022 3031,3893 4063,4153 4159) Alignment (genomic DNA sequence = upper lines): TAAAACAAAG GGATTTTGAA AGAGGAGAAA ATTAAAAAAA AAAAGAAAAA GAAGGGAGAA 3081 |||||||||| TAAAACAAAG .......... .......... .......... .......... .......... 215 CGAGTGAGAG GGAGAGAAGA ACGAAGAGGA AAGCAAAGAA CTTGAGGAGT AGCTTGCGTG 3141 .......... .......... .......... .......... .......... .......... 215 ATCACGAATT CTTCGCTGGA GGTAGGTTAT GGTTTATGCT ATTTCATAGT AAACTCTTAA 3201 .......... .......... .......... .......... .......... .......... 215 TAGCGAATGA TATGTGTTGG GTAGTATTGT AAAGTCTTCT ATATGCTTAA TTGTGTGCTT 3261 .......... .......... .......... .......... .......... .......... 215 GCATGACGTG ATTATATAAT TGTGATAAAA TAAGCATGAT GAGGCTATTG AATCTTAAAC 3321 .......... .......... .......... .......... .......... .......... 215 CTTAAGACCT CTTTGTTAAT GATGATGCCT TGGTATAAAA GAAGGCTTGA TGAACTGAAA 3381 .......... .......... .......... .......... .......... .......... 215 GAATGAGAAT TAGGGGATCG GAGTGTCACG TTTCGACACC AGGATAGTAT GGATCGGGTG 3441 .......... .......... .......... .......... .......... .......... 215 TCACGTTCCG ACACCAGGAT AGTATAGATC GGGTGTCACG TTCCGACACC AGGATAGTAT 3501 .......... .......... .......... .......... .......... .......... 215 GGATCGGGTG TCACGTTTTG ACACCAGGAT AGTAAAGAGA ATGAATCTTG AATTATGCTA 3561 .......... .......... .......... .......... .......... .......... 215 ATATACTCAG ATTTAATGAA CCTGTTTCCC AAATGAGTAT GGTGTGGAGG CTTGAGTCCT 3621 .......... .......... .......... .......... .......... .......... 215 CATAGATGTG CTTGGGTTGT GCCCAATGGT TATGGTACTT GTTGTTGTCA CCTGTTTAGT 3681 .......... .......... .......... .......... .......... .......... 215 ATTGTAGTTG ATTTTATGTT ATTATCTGAT ATATATTGCT TTCTATTTTG AGTTGGCCGA 3741 .......... .......... .......... .......... .......... .......... 215 TGATACCTAC TCAGTACTTG TGCCTTGTAC TGACCCCTAC TTGTATGTTT CTTTCTTTGT 3801 .......... .......... .......... .......... .......... .......... 215 TATTTGTGGA GTGCAGCAAA CGTGCCACAA CTTCGACTCA ACCGCAACTC TAGCCAGACT 3861 .......... .......... .......... .......... .......... .......... 215 TCAGCATAAT CAGATTTCAG GTGAGCTATT GTTCCTAGCT CGGACTGGAT TCTTTCTTTC 3921 | |||||| ||||||||| | | ||| .......... .......... .......... .CTTCTAGCT TGGACTGGAT CTTCTTCTTC 244 AGGTCTTGAT GTCTTGAAGT TCGGACATGG ACCATCTCTT TTATTTATTT TAGCTTCTTA 3981 | |||||||| | |||||||| || | ||||| || | || | |||| ||||| |||||||||| ATGTCTTGAT GCCTTGAAGT TCCGGCATGG ACTAGCT-GT TTATGTATTT TAGCTTCTTA 303 GATACTCTTA GATTTAGTAA TTTGAGGATA GATGTTCTTG TGATGATGAC TTCCAGATTT 4041 |||||||||| |||||||||| || || | || |||||||||| ||||||| || |||||||||| GATACTCTTA GATTTAGTAA TTCGAAG-TA GATGTTCTTG TGATGATAAC TTCCAGATTT 362 TGGGGATAAT GATAAGTTTT GAGTTTTAGA AGTTAATTAT TGATTTCGTT AATGAGTTTT 4101 | |||| ||| ||| | || || T-GGGA-AAT AATAGTTATT GA........ .......... .......... .......... 382 AAGTTTTCCG TATTATATTC TGTTTATTAT GGTTGAAATG TTGGGGTTTA GATTGGTT 4159 ||||||| .......... .......... .......... .......... .......... .ATTGGTT 389 hqPGS_C08HBa0294K15.1+_SGN-E352844+ (3893 4063,4153 4159) ******************************************************************************** EST sequence 111 -strand 686 n (File: SGN-E241789-) 1 TTGTTAATGA TGATGTCTTG GTATAAAAGA AGGCTTGATG AACTAAAAGA ATGAGGTTAG 61 GGGATCGGGT GTCACGAACC GACACGTAGT ATTAATGGAT CGGGTGTCAC GAACCGACAC 121 ATAGTATTAA TGGATCGGGT GTCACGAATC GGCACGTAGT ATTAGGAGAT CGGGTGTAAC 181 GAACCGACAC GTAGTATTAG GGGATCGGGT GTCACGAACC GACACGTAGC ATTAGGGGAT 241 CGGAGTATCA CGTTCCGACA CCACGATAGT AAAAAGAATG AATCTTGAAT TATGTTAATG 301 TACTCAATTT AATGAACCTG TTTCCCAAAT GAGTATGGTG TGGAGGCTTG AGTCCTCATA 361 GATGTTCTTG GGTTGTGCCC AATGGTTATG GTACTTGTTG TTGTCACCTG TTAAGTGTTA 421 TGGTTGATTT TATTTTATTA TTTGATATAT ATTGTTCTCT ATTCTGAGTT GGCCGATGAT 481 ATCTACTCAG TACTCGTGTT TGTACTGACC CCTACTTTTA TGTTTTCTTT TTGTTAATTG 541 TGGAGTGCAG CAAACGTACC GTCGTCTTCA ACTCAACCGC AACTCTAACC AGTCTTCATC 601 ACGTCAGATT TCAGGGTGAG CTATTGTTCC TAGCTCGGAC TGGATTCTCT CTCATTCATG 661 TCTTGATGTC CTTGAAGATC AGACAT Predicted gene structure (within gDNA segment 189 to 4894): Exon 1 3373 3949 ( 577 n); cDNA 111 686 ( 576 n); score: 0.824 MATCH C08HBa0294K15.1+ SGN-E241789- 0.824 577 0.841 C PGS_C08HBa0294K15.1+_SGN-E241789- (3373 3949) Alignment (genomic DNA sequence = upper lines): GAACTGAAAG AATGAGAATT AGGGGATCGG AGTGTCACGT TTCGACACCA GGATAGTATG 3432 |||| || | || || ||| | ||||||| |||||||| ||| ||| | || || | GAACCGACA- CAT-AGTATT AATGGATCGG -GTGTCACGA ATCGGCACGT AG-TATTAGG 166 -GATCGGGTG TCACGTTCCG ACACCAGGAT AGTA-TAGAT CGGGTGTCAC GTTCCGACAC 3490 ||||||||| | ||| ||| |||| | | | || ||| |||||||||| | ||||||| AGATCGGGTG TAACGAACCG ACACGTAG-T ATTAGGGGAT CGGGTGTCAC GAACCGACAC 225 -CAGGATAGT ATGGATCGG- GTGTCACGTT TTGACACCAG GATAGTAAAG AGAATGAATC 3548 || || ||||||| || ||||||| ||||||| ||||||||| |||||||||| GTAGCAT-TA GGGGATCGGA GTATCACGTT CCGACACCAC GATAGTAAAA AGAATGAATC 284 TTGAATTATG CTAATATACT CAGATTTAAT GAACCTGTTT CCCAAATGAG TATGGTGTGG 3608 |||||||||| |||| |||| || ||||||| |||||||||| |||||||||| |||||||||| TTGAATTATG TTAATGTACT CA-ATTTAAT GAACCTGTTT CCCAAATGAG TATGGTGTGG 343 AGGCTTGAGT CCTCATAGAT GTGCTTGGGT TGTGCCCAAT GGTTATGGTA CTTGTTGTTG 3668 |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| AGGCTTGAGT CCTCATAGAT GTTCTTGGGT TGTGCCCAAT GGTTATGGTA CTTGTTGTTG 403 TCACCTGTTT AGTATTGTAG TTGATTTTAT GTTATTATCT GATATATATT GCTTTCTATT 3728 ||||||||| ||| || | | |||||||||| ||||||| | |||||||||| | | |||||| TCACCTGTTA AGTGTTATGG TTGATTTTAT TTTATTATTT GATATATATT GTTCTCTATT 463 TTGAGTTGGC CGATGATACC TACTCAGTAC TTGTGCCTTG TACTGACCCC TACTTGTATG 3788 ||||||||| |||||||| | |||||||||| | ||| ||| |||||||||| ||||| |||| CTGAGTTGGC CGATGATATC TACTCAGTAC TCGTG-TTTG TACTGACCCC TACTTTTATG 522 TTTCTTTCTT TGTTATTTGT GGAGTGCAGC AAACGTGCC- ACAACTTCGA CTCAACCGCA 3847 ||| | | || ||||| |||| |||||||||| |||||| || | |||| | |||||||||| TTT-TCTTTT TGTTAATTGT GGAGTGCAGC AAACGTACCG TCGTCTTCAA CTCAACCGCA 581 ACTCTAGCCA GACTTCAGCA TAATCAGATT TCA-GGTGAG CTATTGTTCC TAGCTCGGAC 3906 |||||| ||| | ||||| || ||||||| ||| |||||| |||||||||| |||||||||| ACTCTAACCA GTCTTCATCA -CGTCAGATT TCAGGGTGAG CTATTGTTCC TAGCTCGGAC 640 TGGATTCT-T -TCTTTCAGG TCTTGATGT- CTTGAAGTTC GGACAT 3949 |||||||| | || |||| | ||||||||| ||||||| || ||||| TGGATTCTCT CTCATTCATG TCTTGATGTC CTTGAAGATC AGACAT 686 hqPGS_C08HBa0294K15.1+_SGN-E241789- (3373 3949) ******************************************************************************** EST sequence 157 -strand 730 n (File: SGN-E546506-) 1 GTTCCGGTAC CAGGATAGAA TATGAGGATC GGAGTGTCAC GTTCCGACAC CAGGATAGAA 61 AATGGATCGG GTGCCACGTT CCGGTACCAG GATAGAATGA GGATCGGAGT GCCACGTTCC 121 GGCACCAGGA TAGAAATAGA GGATCGGAGT GTCACGTACC GACACAAGAG GAAGAAAGAT 181 AATGAATCTT GAAAGATAAT GAATATACTC AATCTAATGA ACTTAATTCC CAAATGAGTA 241 TGGTATTGAG GCTTGAGTCC TCATGTGTGA ACTCGGTTGT AGTTATTGAT GAATTCATGG 301 TGTTATTGCT ACATGTTGAG TATTGTAGTT GATTTACATT ATTATTGATA TATACTGTTC 361 CCTATTTTGA GTTGGCCGAT GATATCTACT CAGTACGTGT GGTTGTACTG ACCCCTACTT 421 TCATGTTTTC CTCTTTGTTA TTTGTGTAAT GCAGCAAACG TTCCGTCAAC TTCAACTCAA 481 CAGTAGATCT AGCCAGTCTT CACTTCATCG GAAAATTCAG GGTGAGCTAA TGCGTCTAGC 541 TTGGACTGGG TCTTCTTCTT CAAGTCTTGA TGCCTTGAAT TTCCGGCATG GACTAGCTTT 601 TTAGTTATTT TGTTCTTAGA CATTCCTAGT TAAGTAATTT GAGATAGATG TTCTTGTGAT 661 GATGACTTCC AGATTTTGGG GATAATAATA ATAGTATTGA ATTGTTTTTA TTAAAAAAAA 721 AAAAAAAAAA Predicted gene structure (within gDNA segment 717 to 5091): Exon 1 3381 4056 ( 676 n); cDNA 12 691 ( 680 n); score: 0.762 PPA cDNA 713 730 MATCH C08HBa0294K15.1+ SGN-E546506- 0.762 676 0.926 C PGS_C08HBa0294K15.1+_SGN-E546506- (3381 4056) Alignment (genomic DNA sequence = upper lines): AGAATGAGAA TTAGGGGATC GGAGTGTCAC GTTTCGACAC CAGGATAG-- TATGGATCGG 3438 || || |||| | | ||||| |||||||||| ||| |||||| |||||||| ||||||||| AGGAT-AGAA TATGAGGATC GGAGTGTCAC GTTCCGACAC CAGGATAGAA AATGGATCGG 70 GTGTCACGTT CCGACACCAG GATAGTAT-A -GATCGG-GT GTCACGTTCC GACACCAGGA 3495 ||| |||||| ||| ||||| ||||| || | |||||| || | |||||||| | |||||||| GTGCCACGTT CCGGTACCAG GATAGAATGA GGATCGGAGT GCCACGTTCC GGCACCAGGA 130 TAG---TA-T GGATCGG-GT GTCACGTTTT GACACCAGGA TAGTAAAGAG AATGAATCTT 3550 ||| || ||||||| || ||||||| ||||| || | ||||| |||||||||| TAGAAATAGA GGATCGGAGT GTCACGTACC GACACAAGAG GAAGAAAGAT AATGAATCTT 190 GAATTATGCT -AATATACTC AGATTTAATG AACCTGTTTC CCAAATGAGT ATGGTGTGGA 3609 ||| || | ||||||||| | || ||||| ||| | ||| |||||||||| ||||| | || GAAAGATAAT GAATATACTC A-ATCTAATG AACTTAATTC CCAAATGAGT ATGGTATTGA 249 GGCTTGAGTC CTCATAGATG TGCTTGGGTT GTGCCCAATG GT-TATGGTA CTTGTTGTTG 3668 |||||||||| ||||| || | | |||| || | || | || |||| ||| GGCTTGAGTC CTCATGTGTG AAC-TCGGTT GTAGTTATTG ATGAATTCAT GGTGTTATTG 308 TCACCTGTTT AGTATTGTAG TTGATTTTAT GTTATTATCT GATATATATT GCTTTCTATT 3728 || |||| |||||||||| |||| |||| ||||||| | |||||||| | | | ||||| CTACATGTTG AGTATTGTAG TTGA-TTTAC ATTATTAT-T GATATATACT GTTCCCTATT 366 TTGAGTTGGC CGATGATACC TACTCAGTAC TTGTGCCTTG TACTGACCCC TACTTGTATG 3788 |||||||||| |||||||| | |||||||||| |||| ||| |||||||||| ||||| ||| TTGAGTTGGC CGATGATATC TACTCAGTAC GTGTG-GTTG TACTGACCCC TACTTTCATG 425 TTTCTTTCTT TGTTATTTGT GGAGTGCAGC AAACGTGCC- ACAACTTCGA CTCAACCGCA 3847 ||| |||| |||||||||| | | |||||| |||||| || ||||||| | |||||| | | TTTTCCTCTT TGTTATTTGT GTAATGCAGC AAACGTTCCG TCAACTTCAA CTCAACAGTA 485 ACTCTAGCCA GACTTCAGCA TAATC--AGA TTTCA-GGTG AGCTATTGTT CCTAGCTCGG 3904 |||||||| | ||||| | | ||| | | |||| |||| ||||| || |||||| || GATCTAGCCA GTCTTCA-CT TCATCGGAAA ATTCAGGGTG AGCTAATGCG TCTAGCTTGG 544 ACTGGATTCT TTCTTTCAGG TCTTGATGTC TTGAAGTTCG GACATGGACC ATCTCTTTTA 3964 ||||| | | | |||| | |||||||| | ||||| ||| | ||||||| | || ||||| ACTGGGTCTT CTTCTTCAAG TCTTGATGCC TTGAATTTCC GGCATGGACT AGCT-TTTTA 603 TTTATTTTAG CTTCTTAGAT ACTCTTAGAT TTAGTAATTT GAGGATAGAT GTTCTTGTGA 4024 ||||||| | |||||||| | || ||| | | |||||||| || ||||||| |||||||||| GTTATTTT-G -TTCTTAGAC ATTCCTAG-T TAAGTAATTT GA-GATAGAT GTTCTTGTGA 659 TGATGACTTC CAGATTTTGG GGATAATGAT AA 4056 |||||||||| |||||||||| ||||||| || || TGATGACTTC CAGATTTTGG GGATAATAAT AA 691 hqPGS_C08HBa0294K15.1+_SGN-E546506- (3381 4056) ******************************************************************************** EST sequence 33 +strand 515 n (File: SGN-E242359+) 1 CCTAATCTAC TTTGTTAATA ATGATGCCTT GGTATAAAAG AAGGCTTGAT GAACGAAAGT 61 GGTGAGATTA GGGGATCGGG TGCCACGTTC CGGTACCAGG ATAGAATATG GATCGGGTGT 121 CACGTTCCGA CACCAGGATA GAATATGGAT CGGGTGCCAC GTTCCGGTAC CAGGATAGAA 181 TATGGATCGG GTGTCACGTT CCGACACCAG GATAGAATAT GGATCGGGTG TCACGTTCTG 241 ACACCAGGAT AGAATATGGA TCGGGTGCCA CGTTCCGGTG CCAGGATAGT ATATTGAGGA 301 GTGGAGTGTC ACGTAAGGAC ACGAGGGGAA TAAATATGAT GAATCTTGAA ATATGTTAAT 361 ATATGCAATC CAATGAACTA AATTCCCAAA TAAGTATGAT GAGGAGGTGT GAGTCCTCAT 421 TGATGTGCTT GGTGATGCAA CCAAGGGTTA TGGTAATTGC AAATGCTGCA TGCTAAGGAT 481 ATTAGTTAAT TTTATGATAT TGCTTAATAC ATACT Predicted gene structure (within gDNA segment 2543 to 6878): Exon 1 3396 3716 ( 321 n); cDNA 184 513 ( 330 n); score: 0.718 MATCH C08HBa0294K15.1+ SGN-E242359+ 0.718 321 0.623 C PGS_C08HBa0294K15.1+_SGN-E242359+ (3396 3716) Alignment (genomic DNA sequence = upper lines): GGATCGGAGT GTCACGTTTC GACACCAGGA TAG--TATGG ATCGGGTGTC ACGTTCCGAC 3453 ||||||| || |||||||| | |||||||||| ||| ||||| |||||||||| |||||| ||| GGATCGG-GT GTCACGTTCC GACACCAGGA TAGAATATGG ATCGGGTGTC ACGTTCTGAC 242 ACCAGGATAG --TATAGATC GGGTGTCACG TTCCGACACC AGGATAG--T A-T--GGA-T 3505 |||||||||| ||| |||| ||||| |||| ||||| || ||||||| | | | ||| | ACCAGGATAG AATATGGATC GGGTGCCACG TTCCGGTGCC AGGATAGTAT ATTGAGGAGT 302 CGGGTGTCAC GTTTTGACAC CAGGATAGTA AAGAGAATGA ATCTTGAATT ATGCTAATAT 3565 | ||||||| || ||||| ||| | || || | |||| |||||||| | ||| |||||| GGAGTGTCAC GTAAGGACAC GAGGGGAATA AATATGATGA ATCTTGAAAT ATGTTAATAT 362 ACTCAGATTT AATGAACCTG TTTCCCAAAT GAGTATGGTG TGGAGGCTTG AGTCCTCATA 3625 | || || ||||||| ||||||||| |||||| || ||||| || ||||||||| ATGCA-ATCC AATGAACTAA ATTCCCAAAT AAGTATGATG AGGAGGTGTG AGTCCTCATT 421 GATGTGCTTG G-GTTGTGCC CAATGGTTAT GGTACTTGTT GTTGTCACCT GTTTAGTATT 3684 |||||||||| | | || | ||| |||||| |||| ||| || | | | | || || GATGTGCTTG GTGATGCAAC CAAGGGTTAT GGTAATTGCA AATGCTGCAT GCTAAGGATA 481 GTAGTTGATT TTATGTTATT ATCTGATATA TA 3716 ||||| ||| ||||| |||| | ||| | || TTAGTTAATT TTATGATATT GCTTAATACA TA 513 hqPGS_C08HBa0294K15.1+_SGN-E242359+ (3396 3716) ******************************************************************************** EST sequence 56 +strand 481 n (File: SGN-E246710+) 1 CACAAACCGA CATATAGATT TAGGGGATCG GAGTGTCACG TACCGACACA AGAGGATTAA 61 TGAATATTGA GGGAGCGGAG TGTCACGTAC CGACACAAGA GAAATAAAGA TAATGAATCT 121 TGAAAGATGT TAATATACTC AATCTAATGA ACATGATTCC CAAATGAGTA TGGTATTGAG 181 GCTTGAGTCC TCATGTGTGA ACTTGACGGT AATTGTTAAT GATATAGTAT TTGTTGTTGC 241 TACATGTTGA GTATCATAGT TGATTTTATG ATATTACTTG GTATATATAT TGATTTCTAT 301 TTTGAGTTGG CCGATGATAT CTACTCAGTA CCCGTGTTTT GTACTGACCC CTACTTTTAT 361 GTTCTCTTCT TGTTTATTTG TGGAGTGCAG CAAACGTGCC ATCGTGTTCA ACTCAACAGT 421 AATTCAAGCC AGTCTTACTA CATCGGAAAT TCAGGGTGAG CTAATGCTTC TAGCTTGGAC 481 T Predicted gene structure (within gDNA segment 1427 to 5238): Exon 1 3509 3907 ( 399 n); cDNA 80 481 ( 402 n); score: 0.769 MATCH C08HBa0294K15.1+ SGN-E246710+ 0.769 399 0.830 C PGS_C08HBa0294K15.1+_SGN-E246710+ (3509 3907) Alignment (genomic DNA sequence = upper lines): GTGTCACGTT TTGACACCAG GATAGTAAAG AGAATGAATC TTGAATTATG CTAATATACT 3568 ||||||||| ||||| || | ||||| | |||||||| ||||| ||| ||||||||| GTGTCACGTA CCGACACAAG AGAAATAAAG ATAATGAATC TTGAAAGATG TTAATATACT 139 CAGATTTAAT GAACCTGTTT CCCAAATGAG TATGGTGTGG AGGCTTGAGT CCTCATAGAT 3628 || || |||| |||| || || |||||||||| |||||| | | |||||||||| |||||| | CA-ATCTAAT GAACATGATT CCCAAATGAG TATGGTATTG AGGCTTGAGT CCTCATGTGT 198 GTGCTTG--G GTTGTGCCCA ATGGTTATGG TACTTGTTGT TGTCACCTGT TTAGTATTGT 3686 | |||| | || | | || | ||| | || ||||||| || || ||| | ||||| | GAACTTGACG GTAATTGTTA AT-GATATAG TATTTGTTGT TGCTACATGT TGAGTATCAT 257 AGTTGATTTT ATGTTATTA- TCTG-ATATA TATTGCTTTC TATTTTGAGT TGGCCGATGA 3744 |||||||||| ||| ||||| | | ||||| ||||| |||| |||||||||| |||||||||| AGTTGATTTT ATGATATTAC TTGGTATATA TATTGATTTC TATTTTGAGT TGGCCGATGA 317 TACCTACTCA GTACTTGTGC CTTGTACTGA CCCCTACTTG TATGTTTCTT TCTTTGTTAT 3804 || ||||||| |||| ||| ||||||||| ||||||||| |||||| | |||| |||| TATCTACTCA GTACCCGTGT TTTGTACTGA CCCCTACTTT TATGTTCTCT TCTTGTTTAT 377 TTGTGGAGTG CAGCAAACGT GCCA-CAACT TCGACTCAAC CGCAACTCTA GCCAGACTT- 3862 |||||||||| |||||||||| |||| | | || ||||||| | || || | ||||| ||| TTGTGGAGTG CAGCAAACGT GCCATCGTGT TCAACTCAAC AGTAATTCAA GCCAGTCTTA 437 CAGCATAATC AGATTTCAGG TGAGCTATTG TTCCTAGCTC GGACT 3907 | ||| | ||| || ||||||| || | |||||| ||||| CTACAT-CGG AAATTCAGGG TGAGCTAATG CTTCTAGCTT GGACT 481 hqPGS_C08HBa0294K15.1+_SGN-E246710+ (3509 3907) ******************************************************************************** EST sequence 24 +strand 729 n (File: SGN-E351546+) 1 TTGGCCGATG ATATCTACTC AGTAGCCGTG TTTTGTACTG ACCCCTACTT TTATGTTTTT 61 CTTCTTGGTA TTTGTGGAGT GCAGCAAACG TGCCGTCATC TTCGACTCAA CAGTAACTCA 121 AGCCAGTCTT CGTCACACCG GATCTTCAGG GTGAGCTAAC GCTTCTAGCT TGGACTGGAT 181 CTTCTCCTTC ATGTCTTGAT GCCTTGAACT TCCGGCATGG ACTAGCTTCT TATGTAATTT 241 TTTAGCTTCT TAGAAACTCT TAGAATTAGT AGTTTAAAGT AGATGTTCTT GTGATGATGA 301 CTTCCAGGTT TTGGGAATAA TAGATGTTTA ATAATAGTAG TTATTGATTT TATTAATGAG 361 TTTAAGTCTT CCGCATTACT TTCTGTTGCT ATTACATTGA AATGTTAAGG TTTAGATTGG 421 TTGGTTCGCT CACATAGGAG GGTAAGTGTG GGTGCCAGTG GCGGCCCGGA TTTGGGTCGT 481 GACAAAACTT GGTATCAGAG CATTAGGTTC GTTGGTCTCA TCACACAAGA ACAAGTCTAG 541 TAGAGTCTTA AGGAACGGTA GGGGGACGCT TTTACTTTTC CTTGAGAGGC TATAAGACTT 601 TAGGAAAACT TCACTCTTTC ATTCTTTCTT TCGTGCTACT ACTTCGAGTC AATTGGTATC 661 TAAGCGATAC GAATTGGTAT CTGACCATNC TCACTCTCTT GCCAGATGGG TAGAACTAGA 721 GCAACGACT Predicted gene structure (within gDNA segment 2846 to 6694): Exon 1 3734 4461 ( 728 n); cDNA 1 729 ( 729 n); score: 0.812 MATCH C08HBa0294K15.1+ SGN-E351546+ 0.812 728 0.999 C PGS_C08HBa0294K15.1+_SGN-E351546+ (3734 4461) Alignment (genomic DNA sequence = upper lines): TTGGCCGATG ATACCTACTC AGTACTTGTG CCTTGTACTG ACCCCTACTT GTATGTTTCT 3793 |||||||||| ||| |||||| |||| ||| |||||||| |||||||||| ||||||| | TTGGCCGATG ATATCTACTC AGTAGCCGTG TTTTGTACTG ACCCCTACTT TTATGTTTTT 60 TTCTTTGTTA TTTGTGGAGT GCAGCAAACG TGCCA-CAAC TTCGACTCAA CCGCAACTCT 3852 | ||| || |||||||||| |||||||||| |||| || | |||||||||| | | ||||| CTTCTTGGTA TTTGTGGAGT GCAGCAAACG TGCCGTCATC TTCGACTCAA CAGTAACTCA 120 AGCCAGACTT CAGCATAATC AGAT-TTCA- GGTGAGCTAT TGTTCCTAGC TCGGACTGGA 3910 |||||| ||| | || | | ||| |||| ||||||||| | | ||||| | |||||||| AGCCAGTCTT CGTCA-CACC GGATCTTCAG GGTGAGCTAA CGCTTCTAGC TTGGACTGGA 179 TTCTTTCTTT CAGGTCTTGA TGTCTTGAAG TTCGGACATG GACCATC-TC TTTTAT-TTA 3968 | | || || || ||||||| || |||||| ||| | |||| ||| | | || || | | | TCTTCTCCTT CATGTCTTGA TGCCTTGAAC TTCCGGCATG GACTAGCTTC TTATGTAATT 239 TTTTAGCTTC TTAGATACTC TTAGATTTAG TAATTTGAGG ATAGATGTTC TTGTGATGAT 4028 |||||||||| ||||| |||| ||||| |||| || ||| | | ||||||||| |||||||||| TTTTAGCTTC TTAGAAACTC TTAGAATTAG TAGTTTAAAG -TAGATGTTC TTGTGATGAT 298 GACTTCCAGA TTTTGGGGAT AATGATAAGT TTTGAGTTTT AGAAGTTAAT TATTGATTTC 4088 ||||||||| ||||||| || ||| | | | ||| | | | || || | ||||||||| GACTTCCAGG TTTTGGGAAT AAT-AGATG- TTT-A---AT AATAG-TAGT TATTGATTTT 351 GTTAATGAGT TTTAAGTTTT CCGTATTATA TTCTGTT--T ATTATGGTTG AAATGTTGGG 4146 |||||||| ||||||| || ||| |||| ||||||| | |||| ||| ||||||| | ATTAATGAG- TTTAAGTCTT CCGCATTACT TTCTGTTGCT ATTA-CATTG AAATGTTAAG 409 GTTTAGATTG GTTGGTTCGC TCACATAGGA GGGTAAGTGT GGGTGCCACT CACGGCTC-G 4205 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||| | | GTTTAGATTG GTTGGTTCGC TCACATAGGA GGGTAAGTGT GGGTGCCAGT GGCGGCCCGG 469 TTTTGGGTCG TGAC-AAACT TGGTATCAGA GCATTAGGTT CGTTGGTCTC ATCACACAAG 4264 ||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTGGGTCG TGACAAAACT TGGTATCAGA GCATTAGGTT CGTTGGTCTC ATCACACAAG 529 AACAAGTCTA GTAGAGTCTT GAGGAATGGT AGGGGGACGC CTTTACTTTT CTTTGAGAGG 4324 |||||||||| |||||||||| ||||| ||| |||||||||| ||||||||| | |||||||| AACAAGTCTA GTAGAGTCTT AAGGAACGGT AGGGGGACGC TTTTACTTTT CCTTGAGAGG 589 CTATAAGACT TAAGGAAAA- TT--C-CATT CTTTCTTTCT TTCGTGCTAT TACTTGGATC 4380 |||||||||| | ||||||| || | | || | |||||||| ||||||||| ||||| || CTATAAGACT TTAGGAAAAC TTCACTCTTT CATTCTTTCT TTCGTGCTAC TACTTCGAGT 649 CAATTGGTAT CTAGGTGATA CAAATTGGTA TCTGACCATC TTCACTCTAT TTCGCAGATG 4440 |||||||||| ||| | |||| | |||||||| ||||||||| ||||||| | | | |||||| CAATTGGTAT CTAAGCGATA CGAATTGGTA TCTGACCATN CTCACTCTCT TGC-CAGATG 708 GTTAGAACTA GAGCAACAGC T 4461 | |||||||| ||||||| | | GGTAGAACTA GAGCAACGAC T 729 hqPGS_C08HBa0294K15.1+_SGN-E351546+ (3734 4461) ******************************************************************************** EST sequence 65 +strand 655 n (File: SGN-E356696+) 1 TTGGCCGATG ATATCTACTC AGTAGCCGTG TTTTGTACTG ACCCCTACTT TTATGTTTTT 61 CTTCTTGTTA TTTGTGGAGT GCAGCAAACG TGCCGTCATC TTCGACTCAA CAGTAACTCA 121 AGCCAGTCTT CGTCACACCG GATCTTCAGG GTGAGCTAAC GCTTCTAGCT TGGACTGGAT 181 CTTCTCCTTC ATGTCTTGAT GCCTTGAACT TCCGGCATGG ACTAGCTTCT TATGTAATTT 241 TTTAGCTTCT TAGAAACTCT TAGAATTAGT AGTTTAAAGT AGATGTTCTT GTGATGATGA 301 CTTCCAGGTT TTGGGAATAA TAGATGTTTA ATAATAGTAG TTATTGATTT TATTAATGAG 361 TTTAAGTCTT CCGCATTACT TTCTGTTGCT ATTACATTGA AATGTTAAGG TTTAGATTGG 421 TTGGTTCGCT CACATANGAG GGTAAGTGTG GGTGCCAGTG GCGGCCCGGA TTTGGGTCGT 481 GACAAAACTT GGTATCAGAG CATTAGGTTC GTTGGTCTCA TCACACAAGA ACAAGTCTAG 541 TAGAGTCTTA AGGAACGGTA GGGGGACGCT TTTACTTTTC CTTGAGAGGC TATAAGACTT 601 TAGGAAAACT TCACTCTTTC ATTCTTTCTT TCGTGCTACT ACTTGAGTCC AATTG Predicted gene structure (within gDNA segment 2846 to 5954): Exon 1 3734 4386 ( 653 n); cDNA 1 655 ( 655 n); score: 0.809 MATCH C08HBa0294K15.1+ SGN-E356696+ 0.809 653 0.997 C PGS_C08HBa0294K15.1+_SGN-E356696+ (3734 4386) Alignment (genomic DNA sequence = upper lines): TTGGCCGATG ATACCTACTC AGTACTTGTG CCTTGTACTG ACCCCTACTT GTATGTTTCT 3793 |||||||||| ||| |||||| |||| ||| |||||||| |||||||||| ||||||| | TTGGCCGATG ATATCTACTC AGTAGCCGTG TTTTGTACTG ACCCCTACTT TTATGTTTTT 60 TTCTTTGTTA TTTGTGGAGT GCAGCAAACG TGCCA-CAAC TTCGACTCAA CCGCAACTCT 3852 | |||||| |||||||||| |||||||||| |||| || | |||||||||| | | ||||| CTTCTTGTTA TTTGTGGAGT GCAGCAAACG TGCCGTCATC TTCGACTCAA CAGTAACTCA 120 AGCCAGACTT CAGCATAATC AGAT-TTCA- GGTGAGCTAT TGTTCCTAGC TCGGACTGGA 3910 |||||| ||| | || | | ||| |||| ||||||||| | | ||||| | |||||||| AGCCAGTCTT CGTCA-CACC GGATCTTCAG GGTGAGCTAA CGCTTCTAGC TTGGACTGGA 179 TTCTTTCTTT CAGGTCTTGA TGTCTTGAAG TTCGGACATG GACCATC-TC TTTTAT-TTA 3968 | | || || || ||||||| || |||||| ||| | |||| ||| | | || || | | | TCTTCTCCTT CATGTCTTGA TGCCTTGAAC TTCCGGCATG GACTAGCTTC TTATGTAATT 239 TTTTAGCTTC TTAGATACTC TTAGATTTAG TAATTTGAGG ATAGATGTTC TTGTGATGAT 4028 |||||||||| ||||| |||| ||||| |||| || ||| | | ||||||||| |||||||||| TTTTAGCTTC TTAGAAACTC TTAGAATTAG TAGTTTAAAG -TAGATGTTC TTGTGATGAT 298 GACTTCCAGA TTTTGGGGAT AATGATAAGT TTTGAGTTTT AGAAGTTAAT TATTGATTTC 4088 ||||||||| ||||||| || ||| | | | ||| | | | || || | ||||||||| GACTTCCAGG TTTTGGGAAT AAT-AGATG- TTT-A---AT AATAG-TAGT TATTGATTTT 351 GTTAATGAGT TTTAAGTTTT CCGTATTATA TTCTGTT--T ATTATGGTTG AAATGTTGGG 4146 |||||||| ||||||| || ||| |||| ||||||| | |||| ||| ||||||| | ATTAATGAG- TTTAAGTCTT CCGCATTACT TTCTGTTGCT ATTA-CATTG AAATGTTAAG 409 GTTTAGATTG GTTGGTTCGC TCACATAGGA GGGTAAGTGT GGGTGCCACT CACGGCTC-G 4205 |||||||||| |||||||||| ||||||| || |||||||||| |||||||| | |||| | | GTTTAGATTG GTTGGTTCGC TCACATANGA GGGTAAGTGT GGGTGCCAGT GGCGGCCCGG 469 TTTTGGGTCG TGAC-AAACT TGGTATCAGA GCATTAGGTT CGTTGGTCTC ATCACACAAG 4264 ||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTGGGTCG TGACAAAACT TGGTATCAGA GCATTAGGTT CGTTGGTCTC ATCACACAAG 529 AACAAGTCTA GTAGAGTCTT GAGGAATGGT AGGGGGACGC CTTTACTTTT CTTTGAGAGG 4324 |||||||||| |||||||||| ||||| ||| |||||||||| ||||||||| | |||||||| AACAAGTCTA GTAGAGTCTT AAGGAACGGT AGGGGGACGC TTTTACTTTT CCTTGAGAGG 589 CTATAAGACT TAAGGAAAA- TT--C-CATT CTTTCTTTCT TTCGTGCTAT TACTTGGATC 4380 |||||||||| | ||||||| || | | || | |||||||| ||||||||| |||||| || CTATAAGACT TTAGGAAAAC TTCACTCTTT CATTCTTTCT TTCGTGCTAC TACTTGAGTC 649 CAATTG 4386 |||||| CAATTG 655 hqPGS_C08HBa0294K15.1+_SGN-E356696+ (3734 4386) ******************************************************************************** EST sequence 60 +strand 580 n (File: SGN-E356206+) 1 TTGGCCGATG ATATCTACTC AGTAGCCGTG TTTTGTACTG ACCCCTACTT TTATGTTTTT 61 CTTCTTGTTA TTTGTGGAGT GCAGCAAACG TGCCGTCATC TTCGACTCAA CAGTAACTCA 121 AGCCAGTCTT CGTCACACCG GATCTTCAGG GTGAGCTAAC GCTTCTAGCT TGGACTGGAT 181 CTTCTCCTTC ATGTCTTGAT GCCTTGAACT TCCGGCATGG ACTAGCTTCT TATGTAATTT 241 TTTAGCTTCT TAGAAACTCT TAGAATTAGT AGTTTAAAGT AGATGTTCTT GTGATGATGA 301 CTTCCAGGTT TTGGGAATAA TAGATGTTTA ATAATAGTAG TTATTGATTT TATTAATGAG 361 TTTAAGTCTT CCGCATTACT TTCTGTTGCT ATTACATTGA AATGTTAAGG TTTAGATTGG 421 TTGGTTCGCT CACATAGGAG GGTAAGTGTG GGTGCCAGTG GCGGCCCGGA TTTGGGTCGT 481 GACAAAACTT GGTATCAGAG CATTAGGGTC GTTGGTCTCA TCACACAAGA ACAAGTCTAG 541 TAGAGTCTTA AGGGACGGTA NGGGGACGCT TTTACTTTTC Predicted gene structure (within gDNA segment 2846 to 5204): Exon 1 3734 4315 ( 582 n); cDNA 1 580 ( 580 n); score: 0.812 MATCH C08HBa0294K15.1+ SGN-E356206+ 0.812 582 1.003 C PGS_C08HBa0294K15.1+_SGN-E356206+ (3734 4315) Alignment (genomic DNA sequence = upper lines): TTGGCCGATG ATACCTACTC AGTACTTGTG CCTTGTACTG ACCCCTACTT GTATGTTTCT 3793 |||||||||| ||| |||||| |||| ||| |||||||| |||||||||| ||||||| | TTGGCCGATG ATATCTACTC AGTAGCCGTG TTTTGTACTG ACCCCTACTT TTATGTTTTT 60 TTCTTTGTTA TTTGTGGAGT GCAGCAAACG TGCCA-CAAC TTCGACTCAA CCGCAACTCT 3852 | |||||| |||||||||| |||||||||| |||| || | |||||||||| | | ||||| CTTCTTGTTA TTTGTGGAGT GCAGCAAACG TGCCGTCATC TTCGACTCAA CAGTAACTCA 120 AGCCAGACTT CAGCATAATC AGAT-TTCA- GGTGAGCTAT TGTTCCTAGC TCGGACTGGA 3910 |||||| ||| | || | | ||| |||| ||||||||| | | ||||| | |||||||| AGCCAGTCTT CGTCA-CACC GGATCTTCAG GGTGAGCTAA CGCTTCTAGC TTGGACTGGA 179 TTCTTTCTTT CAGGTCTTGA TGTCTTGAAG TTCGGACATG GACCATC-TC TTTTAT-TTA 3968 | | || || || ||||||| || |||||| ||| | |||| ||| | | || || | | | TCTTCTCCTT CATGTCTTGA TGCCTTGAAC TTCCGGCATG GACTAGCTTC TTATGTAATT 239 TTTTAGCTTC TTAGATACTC TTAGATTTAG TAATTTGAGG ATAGATGTTC TTGTGATGAT 4028 |||||||||| ||||| |||| ||||| |||| || ||| | | ||||||||| |||||||||| TTTTAGCTTC TTAGAAACTC TTAGAATTAG TAGTTTAAAG -TAGATGTTC TTGTGATGAT 298 GACTTCCAGA TTTTGGGGAT AATGATAAGT TTTGAGTTTT AGAAGTTAAT TATTGATTTC 4088 ||||||||| ||||||| || ||| | | | ||| | | | || || | ||||||||| GACTTCCAGG TTTTGGGAAT AAT-AGATG- TTT-A---AT AATAG-TAGT TATTGATTTT 351 GTTAATGAGT TTTAAGTTTT CCGTATTATA TTCTGTT--T ATTATGGTTG AAATGTTGGG 4146 |||||||| ||||||| || ||| |||| ||||||| | |||| ||| ||||||| | ATTAATGAG- TTTAAGTCTT CCGCATTACT TTCTGTTGCT ATTA-CATTG AAATGTTAAG 409 GTTTAGATTG GTTGGTTCGC TCACATAGGA GGGTAAGTGT GGGTGCCACT CACGGCTC-G 4205 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||| | | GTTTAGATTG GTTGGTTCGC TCACATAGGA GGGTAAGTGT GGGTGCCAGT GGCGGCCCGG 469 TTTTGGGTCG TGAC-AAACT TGGTATCAGA GCATTAGGTT CGTTGGTCTC ATCACACAAG 4264 ||||||||| |||| ||||| |||||||||| |||||||| | |||||||||| |||||||||| ATTTGGGTCG TGACAAAACT TGGTATCAGA GCATTAGGGT CGTTGGTCTC ATCACACAAG 529 AACAAGTCTA GTAGAGTCTT GAGGAATGGT AGGGGGACGC CTTTACTTTT C 4315 |||||||||| |||||||||| ||| | ||| | |||||||| ||||||||| | AACAAGTCTA GTAGAGTCTT AAGGGACGGT ANGGGGACGC TTTTACTTTT C 580 hqPGS_C08HBa0294K15.1+_SGN-E356206+ (3734 4315) ******************************************************************************** EST sequence 121 -strand 840 n (File: SGN-E542084-) 1 GTTGCTGTAC ATATTCTACA AGGCATAATT TTCTTGAAAT TCCCAATATT GACACCTCAA 61 TGCAGCAAAC ATCATCTTTG CATAGAGATG GTTTTCCAAA ACAGACAGCA TTTATCATCT 121 GAGAAATTTC GGGGCTTTCT GAAAAAGAAA TAGAGTAGTC AGGAACTATC AACATGTATA 181 TAAAGCATCT AACTTTTCTA ATGACATCTT CATGGATGAT GTTGTCCAAC ACGAAGGTCT 241 CAGATGATCT CCAAACTAAA TCACCAAATG AGAGTGTTAT TTCTGCGTAA GCTCTTCCAT 301 CGCGTCTGCT AGCTTACACT CTCATTTACT TTGCAATGGG ATTCCTCTTT GGTTCCTCCT 361 TCAGCTTCTT CTCATTCCCG GTGTGCTTTC CCTTCTCCTC CGTCCACTGA TTTTAGCAAA 421 CGTGCCGTCA TCTTCGACTC AACAGTAACT CTAGCCAGTC TTCATTACTT CGGATATCAG 481 GGTGAGCTAA TGCTTTCTAG ATTGGACTGG ATCTTCCTCT TCATGTCTTG ATGTCTTGAA 541 GTTCCGGCAT GGACTAGCTT TTATGTATTT TTTAGCTTCT TAGAAACTCT TAGATTTAGT 601 AATTTGAAGT AGATGTTCTT ATGATGATGA CTTCCAGATT TTGGGAAATA ATAGTTATTG 661 AATTGGTTTT CATTAATAAG TTTAAGTCTT CCGCATTACT TTATGTTGAT ATTACATTGA 721 AATGTTAAGG TTTGGATTGG TTGGTTCGCT CACATAGCAG GGTAAGTGTG GGTGCCAGTC 781 GCGATCCGAT TTGGGTCGTG ACATTTATAG AAGTAAGAAA TTTTCCCCTA AAAAAAAAAA Predicted gene structure (within gDNA segment 1 to 5424): Exon 1 765 786 ( 22 n); cDNA 390 411 ( 22 n); score: 0.591 Intron 1 787 3812 (3026 n); Pd: 0.035 (s: 0), Pa: 0.875 (s: 0.81) Exon 2 3813 4220 ( 408 n); cDNA 412 803 ( 392 n); score: 0.781 PPA cDNA 830 840 MATCH C08HBa0294K15.1+ SGN-E542084- 0.781 430 0.512 C PGS_C08HBa0294K15.1+_SGN-E542084- (765 786,3813 4220) Alignment (genomic DNA sequence = upper lines): CCCAATTCAA TGGTCCGCTC ATGCAACCCA TGCCCAAACT AATAGCATAC CAATACGTAG 824 ||| || |||| || || CCCTTCTCCT CCGTCCACTG AT........ .......... .......... .......... 411 TACCCAATTT AATGTTTATG CTAGAATATA GCAATCGATC TAATATTTAT GCCGAAATGT 884 .......... .......... .......... .......... .......... .......... 411 GGCAACCGAT TTCATATTTA TGTCGAAATG TGACAACCGA TCAGAAATCA ACACCCGATC 944 .......... .......... .......... .......... .......... .......... 411 CATTCAACAA ACCACAATCA CAATGTATAC AATCATAAAA TAAGAGGTTA TTCATGGAAA 1004 .......... .......... .......... .......... .......... .......... 411 GTAGTTCTTA GTTCATATTT AGTTACATTA GGTGTGATTA ATAGACTTCA TTCACATGCA 1064 .......... .......... .......... .......... .......... .......... 411 TGCATTACAA TGAAGCAATC ACTAACATAC ATCATTCAAA ACATGATATC ACAGTCATCA 1124 .......... .......... .......... .......... .......... .......... 411 CCTACCTCGA ATCCAAGCTT GAATCCCTTA AGGCATTTGA ATCTTCCCTT TTTGAATTCT 1184 .......... .......... .......... .......... .......... .......... 411 TTTCGCTTGT TCTAGGTCTA CTAATGACAA TTTATAATAA TCAACAATCA AAGGTCTAAT 1244 .......... .......... .......... .......... .......... .......... 411 TATCCAGATT ATAAAGAACT CAATAATCCT AGACCAAATC CATGATCCCA ATACCTAGAT 1304 .......... .......... .......... .......... .......... .......... 411 TGGGGATTTT TCCACCATAA TTCTCATATC AAAACCCTCC CACGTCAATA ATTACCCAAG 1364 .......... .......... .......... .......... .......... .......... 411 GAACTAAGTT CTATGAATTG AAACATGAAT TCGGCGAATA AAAACCTTAC CTTTAGCCTT 1424 .......... .......... .......... .......... .......... .......... 411 AAGTATGGTG AAAAAACCTT CAAGAACACA CTTGGGGTCG TTCCTTAGCT ATCAAAGTTC 1484 .......... .......... .......... .......... .......... .......... 411 AGAAGTGTAT AATAAAACAT TTTTGAGGTT TTAAGTTGGG AGTTAAATAG TGTTTGTCCC 1544 .......... .......... .......... .......... .......... .......... 411 GCTATGGCGA CCCCAACCCG CCACAGCGGC TTCGCCCTAG CAGAAATAAT CCAGCTACAA 1604 .......... .......... .......... .......... .......... .......... 411 CGGCTTGCAC AGAAACAGTG AGCAAAATTA ATAATTCCAA ACCCCCATTT CACAACACAC 1664 .......... .......... .......... .......... .......... .......... 411 CATTATCCCA TGACACACAA AAAATACACA TTCACGCTAA GATCAATTCG GGAGTTCTAC 1724 .......... .......... .......... .......... .......... .......... 411 TCACCTAAAT TCAATTAAGT AAAAAGTCGT ACTAGATCCT TAAAATCTTG CCTATCCACT 1784 .......... .......... .......... .......... .......... .......... 411 CATGTAATCA AATTCATTTA TAGATCTCTC ATTTGTTATC ATATTTTCTG ATTTTGTCCA 1844 .......... .......... .......... .......... .......... .......... 411 AATCTAATAC TAGAGTAGAA AATCTCAAGT TACTACAAAA AAATTTTTGG CCCCAATTCT 1904 .......... .......... .......... .......... .......... .......... 411 TTCCCCGTTG GCTTTTTCCT AACGACGGAA ATCAGGTCGC TATAGATTCA CTATTTATAA 1964 .......... .......... .......... .......... .......... .......... 411 TTATTGATTT ATTGATTTAG ATCTTGATTT GACTATTTTC TTATCGAGTG AATGAATATA 2024 .......... .......... .......... .......... .......... .......... 411 TATAATAAAC ATATATATAT ATATATATAT ATATATATAT ATAAAATTTT AGTTTATTAT 2084 .......... .......... .......... .......... .......... .......... 411 TGCAATTACC GTTTAAGAAA AGGTTTGGTA ATGTCATTAC TTCAACCACA TCATTATTAT 2144 .......... .......... .......... .......... .......... .......... 411 TTTTTTATAA TAAAAACAAA ATTCTAAATA AAAATTGGAT TAAAATAACT CACCCAAGTA 2204 .......... .......... .......... .......... .......... .......... 411 AAGACCCGCC CAAAATTCCT ATAACCCATT AGTAATCCAA TACTTTCATT CCCAATTTTG 2264 .......... .......... .......... .......... .......... .......... 411 TTACGGGTGA TAATGTTGTT TGTACTATTC ACAGATAGTA ATTATTGAAA AATTCTTTTT 2324 .......... .......... .......... .......... .......... .......... 411 GCGGTCGTAA AGCCACTACT GAGGAATTGG AAGGGAGGGA TAAACAAGCT TTTGCAAAAA 2384 .......... .......... .......... .......... .......... .......... 411 CATTAGACGT GATGAAGTTT AGTTTTATTT ACGAAGCCCT ACTGTTTAAA AGTGATGATA 2444 .......... .......... .......... .......... .......... .......... 411 TTATGCATTA GTTCACAAAT ATCAAATAGC AAATTCAAAT TAGTTCACAA CTTTTGAAGT 2504 .......... .......... .......... .......... .......... .......... 411 AATGCCAGAA CATTAAACTC ATGTAACGAC CTGTTAGTCG TTTTGAGCAG TAGAGTTTAT 2564 .......... .......... .......... .......... .......... .......... 411 TTCTGGTAAT AACTGTCTGG GTTGACGGAT CCCACGACGG ACCGTCATGG GCACGACGGA 2624 .......... .......... .......... .......... .......... .......... 411 CCGTCGAGGG GGTCTCGTTC CAAAATACTT AGTTTCTGAA AAATTGGGTA CTGAGAACAA 2684 .......... .......... .......... .......... .......... .......... 411 CTCTCTGAAC TTCGCAACGG AAGAGCAGGA CGGACCGTCG TAGGCACGAC GGACCGTCAC 2744 .......... .......... .......... .......... .......... .......... 411 ATGGTCTTAA ATAAAAATTG AGTCTCTGAA CTCTGTAACG ACTTAGCAGG ACGGACTATC 2804 .......... .......... .......... .......... .......... .......... 411 GCAGGCACGA CGGACCGTCA CAGACTGAGT AACCCTGACT GGGTCGGATT TCTGTTAAAA 2864 .......... .......... .......... .......... .......... .......... 411 TTTTTTAAGG GGTGTTTTGG ACTATTCCTG CTTATGATTA TAAGGTTAGT GGTTTAATGT 2924 .......... .......... .......... .......... .......... .......... 411 TAATAATTCA ATTTCTTGGG GGTTAAAGAA GACAACCTTG GAATAAGTAA TGGGTTACTT 2984 .......... .......... .......... .......... .......... .......... 411 TTAGCATCTT TTATACTTAA TTATATGATA AATAGGGTAA AACAAAGGGA TTTTGAAAGA 3044 .......... .......... .......... .......... .......... .......... 411 GGAGAAAATT AAAAAAAAAA AGAAAAAGAA GGGAGAACGA GTGAGAGGGA GAGAAGAACG 3104 .......... .......... .......... .......... .......... .......... 411 AAGAGGAAAG CAAAGAACTT GAGGAGTAGC TTGCGTGATC ACGAATTCTT CGCTGGAGGT 3164 .......... .......... .......... .......... .......... .......... 411 AGGTTATGGT TTATGCTATT TCATAGTAAA CTCTTAATAG CGAATGATAT GTGTTGGGTA 3224 .......... .......... .......... .......... .......... .......... 411 GTATTGTAAA GTCTTCTATA TGCTTAATTG TGTGCTTGCA TGACGTGATT ATATAATTGT 3284 .......... .......... .......... .......... .......... .......... 411 GATAAAATAA GCATGATGAG GCTATTGAAT CTTAAACCTT AAGACCTCTT TGTTAATGAT 3344 .......... .......... .......... .......... .......... .......... 411 GATGCCTTGG TATAAAAGAA GGCTTGATGA ACTGAAAGAA TGAGAATTAG GGGATCGGAG 3404 .......... .......... .......... .......... .......... .......... 411 TGTCACGTTT CGACACCAGG ATAGTATGGA TCGGGTGTCA CGTTCCGACA CCAGGATAGT 3464 .......... .......... .......... .......... .......... .......... 411 ATAGATCGGG TGTCACGTTC CGACACCAGG ATAGTATGGA TCGGGTGTCA CGTTTTGACA 3524 .......... .......... .......... .......... .......... .......... 411 CCAGGATAGT AAAGAGAATG AATCTTGAAT TATGCTAATA TACTCAGATT TAATGAACCT 3584 .......... .......... .......... .......... .......... .......... 411 GTTTCCCAAA TGAGTATGGT GTGGAGGCTT GAGTCCTCAT AGATGTGCTT GGGTTGTGCC 3644 .......... .......... .......... .......... .......... .......... 411 CAATGGTTAT GGTACTTGTT GTTGTCACCT GTTTAGTATT GTAGTTGATT TTATGTTATT 3704 .......... .......... .......... .......... .......... .......... 411 ATCTGATATA TATTGCTTTC TATTTTGAGT TGGCCGATGA TACCTACTCA GTACTTGTGC 3764 .......... .......... .......... .......... .......... .......... 411 CTTGTACTGA CCCCTACTTG TATGTTTCTT TCTTTGTTAT TTGTGGAGTG CAGCAAACGT 3824 | ||||||||| .......... .......... .......... .......... ........TT TAGCAAACGT 423 GCC-ACAACT TCGACTCAAC CGCAACTCTA GCCAGACTTC AGCATAATCA GATTTCA-GG 3882 ||| || || |||||||||| | ||||||| ||||| |||| | | || ||| ||| || GCCGTCATCT TCGACTCAAC AGTAACTCTA GCCAGTCTTC ATTA-CTTCG GATATCAGGG 482 TGAGCTATTG -TTCCTAGCT CGGACTGGAT TCTTTCT-TT CAGGTCTTGA TGTCTTGAAG 3940 ||||||| || || |||| | |||||||| |||| || || || ||||||| |||||||||| TGAGCTAATG CTTTCTAGAT TGGACTGGA- TCTTCCTCTT CATGTCTTGA TGTCTTGAAG 541 TTCGGACATG GACCATCTCT TTTATTTATT TTAGCTTCTT AGATACTCTT AGATTTAGTA 4000 ||| | |||| ||| | || | | | | | || |||||||||| ||| |||||| |||||||||| TTCCGGCATG GACTAGCTTT TATGTATTTT TTAGCTTCTT AGAAACTCTT AGATTTAGTA 601 ATTTGAGGAT AGATGTTCTT GTGATGATGA CTTCCAGATT TTGGGGATAA TGATAAGTTT 4060 |||||| | | |||||||||| ||||||||| |||||||||| || |||| || | || || | ATTTGAAG-T AGATGTTCTT ATGATGATGA CTTCCAGATT TT-GGGA-AA TAAT-AG--T 655 TGAGTTTTAG AAGTTAATTA TTGATTTCGT TAATGAGTTT TAAGTTTTCC GTATTATATT 4120 | | || | || | | | |||| | |||| || || ||||| |||| | |||| || T-A---TT-- --G--AA-T- TGGTTTTCAT TAATAAG-TT TAAGTCTTCC GCATTACTTT 702 CTGTTTAT-T ATGGTTGAAA TGTTGGGGTT TAGATTGGTT GGTTCGCTCA CATAGGAGGG 4179 |||| || | |||||| |||| |||| | |||||||| |||||||||| ||||| |||| ATGTTGATAT TACATTGAAA TGTTAAGGTT TGGATTGGTT GGTTCGCTCA CATAGCAGGG 762 TAAGTGTGGG TGCCACTCAC GGCTCGTTTT GGGTCGTGAC A 4220 |||||||||| ||||| || | | || ||| |||||||||| | TAAGTGTGGG TGCCAGTCGC GATCCGATTT GGGTCGTGAC A 803 hqPGS_C08HBa0294K15.1+_SGN-E542084- (3813 4220) ******************************************************************************** EST sequence 149 -strand 710 n (File: SGN-E392027-) 1 CAGCAAACGT GCCATCGTGT TCAACTCAAC AGTAATTCAA GCCAGTCTTA CTACATCGGA 61 AATTCAGGGT GAGCTAATGC TTCTAGCTTG GACTGGATCT TCTTCTTCAA GTCTTGATGC 121 CTTGAACTTC CGGCATGGAC TAGCTTCTTA TGTATTTTTA GCTTTTAGAC TACTCTTAGT 181 TTAGTCATTT GATCGTAGAT GTTCTTGTGG TGATGACTTC CAGATTTTGG GGAATAATAG 241 ATGTTGAATT TTAGAAGTTA ATGAATTGGT CTGTATTTAA TGAGTTTAAG TCTTCCACAT 301 TACTTTCTGT TGATATTATA TTGAAATGTT AAGGTTAGAT TGGTTGGTTC GCTCACATAG 361 GAGGGTAAGT GTGGGTGCCA GTCGCAACCC GGTTTTGGTC GTGACAAACT TGGTATCAGA 421 GCATTAGGTT CGTTGGTCTC ATCACACAAG AACGAGTCTA GTAGAGTCTT AAGGAACGGT 481 AGGGGGATGC CTTTACTTTT CCTTGAGAGG CTATAAGACT TTTGGAAAAT TCCATTCTTT 541 CTTCTTTCGT GCTATTACTT GGGTCCAATT GGTATCTAGG TGATACAAAT TGGTATCTGA 601 CCATCTTCAC TCTATTTCGC AGATGGTTAG AACTAGAGCA ACGACTACGC CAGCATCAAC 661 ACCAGCACCG GCGGGACAGG GTGCGACTGA GCCAGCCACT GGGGCTGTGG Predicted gene structure (within gDNA segment 199 to 5737): Exon 1 3815 4478 ( 664 n); cDNA 1 663 ( 663 n); score: 0.832 MATCH C08HBa0294K15.1+ SGN-E392027- 0.832 664 0.935 C PGS_C08HBa0294K15.1+_SGN-E392027- (3815 4478) Alignment (genomic DNA sequence = upper lines): CAGCAAACGT GCCA-CAACT TCGACTCAAC CGCAACTCTA GCCAGACTT- CAGCATAATC 3872 |||||||||| |||| | | || ||||||| | || || | ||||| ||| | ||| CAGCAAACGT GCCATCGTGT TCAACTCAAC AGTAATTCAA GCCAGTCTTA CTACATCG-G 59 AGATTTCAGG TGAGCTATTG TTCCTAGCTC GGACTGGATT CTTTCTTTCA GGTCTTGATG 3932 | ||| || ||||||| || | |||||| ||||||||| | | |||| ||||||||| AAATTCAGGG TGAGCTAATG CTTCTAGCTT GGACTGGATC TTCTTCTTCA AGTCTTGATG 119 TCTTGAAGTT CGGACATGGA CCATCTCTTT TATTTATTT- TAGCTTCTTA GA-TACTCTT 3990 |||||| || | | |||||| | | || | | ||| ||||| |||||| ||| || ||||||| CCTTGAACTT CCGGCATGGA CTAGCT-TCT TATGTATTTT TAGCTT-TTA GACTACTCTT 177 AGATTTAGTA ATTTGAGGAT AGATGTTCTT GTGATGATGA CTTCCAGATT TTGGGGATAA 4050 || |||||| |||||| | |||||||||| ||| |||||| |||||||||| |||||| || AG-TTTAGTC ATTTGATCGT AGATGTTCTT GTGGTGATGA CTTCCAGATT TTGGGG--AA 234 TGATAAGTTT TGAGTTTTAG AAGTTAAT-T ATTGAT-T-T CGTTAATGAG TTTTAAGTTT 4107 | ||| | | ||| |||||| |||||||| |||| | | | |||||||| ||||||| | TAATAGATGT TGAATTTTAG AAGTTAATGA ATTGGTCTGT ATTTAATGAG -TTTAAGTCT 293 TCCGTATTAT ATTCTGTT-- TATTATGGTT GAAATGTTGG GGTTTAGATT GGTTGGTTCG 4165 ||| |||| ||||||| |||||| || |||||||| || ||||||| |||||||||| TCCACATTAC TTTCTGTTGA TATTAT-ATT GAAATGTTAA GG-TTAGATT GGTTGGTTCG 351 CTCACATAGG AGGGTAAGTG TGGGTGCCAC TCACGGCTCG TTTTGGGTCG TGACAAACTT 4225 |||||||||| |||||||||| ||||||||| || | | || ||| ||||| |||||||||| CTCACATAGG AGGGTAAGTG TGGGTGCCAG TCGCAACCCG GTTTTGGTCG TGACAAACTT 411 GGTATCAGAG CATTAGGTTC GTTGGTCTCA TCACACAAGA ACAAGTCTAG TAGAGTCTTG 4285 |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| ||||||||| GGTATCAGAG CATTAGGTTC GTTGGTCTCA TCACACAAGA ACGAGTCTAG TAGAGTCTTA 471 AGGAATGGTA GGGGGACGCC TTTACTTTTC TTTGAGAGGC TATAAGACTT AAGGAAAATT 4345 ||||| |||| |||||| ||| |||||||||| ||||||||| |||||||||| |||||||| AGGAACGGTA GGGGGATGCC TTTACTTTTC CTTGAGAGGC TATAAGACTT TTGGAAAATT 531 CCATTCTTTC TTTCTTTCGT GCTATTACTT GGATCCAATT GGTATCTAGG TGATACAAAT 4405 |||||||||| ||||||||| |||||||||| || ||||||| |||||||||| |||||||||| CCATTCTTTC -TTCTTTCGT GCTATTACTT GGGTCCAATT GGTATCTAGG TGATACAAAT 590 TGGTATCTGA CCATCTTCAC TCTATTTCGC AGATGGTTAG AACTAGAGCA ACAGCTGCGC 4465 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || || ||| TGGTATCTGA CCATCTTCAC TCTATTTCGC AGATGGTTAG AACTAGAGCA ACGACTACGC 650 CGACACCAAC ACC 4478 | || |||| ||| CAGCATCAAC ACC 663 hqPGS_C08HBa0294K15.1+_SGN-E392027- (3815 4478) ******************************************************************************** EST sequence 78 -strand 679 n (File: SGN-E370357-) 1 TTGGAGGTGG TGTTGCCATG GTGGATTGGG GGAAAAATGG AATTGGACTT TGTAGGAGGA 61 GAAATGGGCA TTTACTTACA CAAATGGCCA CTATTTACAA GAAAACACAT CAGAAATTCG 121 AGGAAAATTC TGCATCCGTA GGCAAATTTG AAAAATTTTA CAAATGGCAG AGGTGTAATC 181 AATCAATAAT ATTTGGGTGA CAGCCGAATG ATTAATTGAC ACTCGAATAA AGCAAACGTA 241 CCGTCGTCTT CAACTCAACC GCAACTCTAG CCAGTCTTCA TTATACCGGA TTTCAGTGTG 301 AGCTAACGCT TCTAGCTTGG ACTGGATCTT CTTCTTCATG TCTTGATGCC TTGAAGTTCC 361 GGCATGGACT AGCTTTTTAG TTATTCTAGC TTTCTAGATA CTCTTAGAAT TAGTAATTTG 421 AGGATAGATG TTCTTGTGAT GATGACTTCC AGATTTTGGG GATAATAATA GTTGTTGAGT 481 TTTTAGAAGT TATTTAATTG ATTTTCATTA ATGAGTTTAA GTCTTCCGCA TTATATTCCG 541 TCATTATATT GAAATGTTGG ATTTTGTATT GGTTGGTTCG CTCACATAGG AGGGTAAGTG 601 TGGGTGCCAC TTGCGGCTCG ATTTGGGTCG TGACATTAAA GATTATCGAA TTCATAATAT 661 AATTGTAAGA AAAAAAAAA Predicted gene structure (within gDNA segment 1 to 5476): Exon 1 3816 4220 ( 405 n); cDNA 231 635 ( 405 n); score: 0.836 PPA cDNA 667 679 MATCH C08HBa0294K15.1+ SGN-E370357- 0.836 405 0.596 C PGS_C08HBa0294K15.1+_SGN-E370357- (3816 4220) Alignment (genomic DNA sequence = upper lines): AGCAAACGTG CC-ACAACTT CGACTCAACC GCAACTCTAG CCAGACTTCA GCATAATCAG 3874 ||||||||| || | ||| | |||||||| |||||||||| |||| ||||| || | | | AGCAAACGTA CCGTCGTCTT CAACTCAACC GCAACTCTAG CCAGTCTTCA TTAT-ACCGG 289 ATTTCAG-GT GAGCTATTGT TCCTAGCTCG GACTGGATTC TTTCTTTCAG GTCTTGATGT 3933 ||||||| || |||||| | | |||||| | |||||||| | | |||| ||||||||| ATTTCAGTGT GAGCTAACGC TTCTAGCTTG GACTGGATCT TCTTCTTCAT GTCTTGATGC 349 CTTGAAGTTC GGACATGGAC CATCTCTTTT ATTTATTTTA GCTTCTTAGA TACTCTTAGA 3993 |||||||||| | ||||||| | || |||| | ||||| || |||| |||| |||||||||| CTTGAAGTTC CGGCATGGAC TAGCT-TTTT AGTTATTCTA GCTTTCTAGA TACTCTTAGA 408 TTTAGTAATT TGAGGATAGA TGTTCTTGTG ATGATGACTT CCAGATTTTG GGGATAATGA 4053 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | ATTAGTAATT TGAGGATAGA TGTTCTTGTG ATGATGACTT CCAGATTTTG GGGATAATAA 468 TAAGTTTTGA G-TTTTAGAA GTTAATT-AT TGA-TTTCGT TAATGAGTTT TAAGTTTTCC 4110 || | |||| | |||||||| |||| || || ||| |||| | ||||||| || ||||| |||| TAGTTGTTGA GTTTTTAGAA GTTATTTAAT TGATTTTCAT TAATGAG-TT TAAGTCTTCC 527 GTATTATATT CTGTTTATTA TGGTTGAAAT GTTGGGGTTT AGATTGGTTG GTTCGCTCAC 4170 | |||||||| | | | |||| | ||||||| ||||| ||| |||||||| |||||||||| GCATTATATT CCG-TCATTA T-ATTGAAAT GTTGGATTTT GTATTGGTTG GTTCGCTCAC 585 ATAGGAGGGT AAGTGTGGGT GCCACTCACG GCTCGTTTTG GGTCGTGACA 4220 |||||||||| |||||||||| |||||| || ||||| |||| |||||||||| ATAGGAGGGT AAGTGTGGGT GCCACTTGCG GCTCGATTTG GGTCGTGACA 635 hqPGS_C08HBa0294K15.1+_SGN-E370357- (3816 4220) ******************************************************************************** EST sequence 153 -strand 835 n (File: SGN-E546219-) 1 TGATCAGACA CCTTTATTCT TCGTACTTAC CATGGGTAGC ACAAAATACG TTCAGCGACA 61 TGTACAACCC GATAACCTTG CATCTTGGTT GAAGGATTGT AAGGACAGAA AGTTGAAGCC 121 ATACTTGAAG TCACAGCCAA TTCCAGAATT TAACAATGAA ACTGTGAAGG TGGTGGTTGC 181 AGAGACTCTT GACGATATGG TGTTTAATTC GGGAAAAGAT GTACTGTTGG AGTTCTATCG 241 ACTTGGGTGT AGATATTGTG AGGAGTTTGC TCCCGTCTTG GATGAAATAG CTATCTCATT 301 TGAAAAAGAT CCTCATGTCG TGATTGCTAA AATTGATGGA ACGGAAAATG ATATACCTCG 361 TGACGTATTT GAAGTTGAAG GATTCCCAAC TTTATACTTG AGATCTTCAA CGGGTAGTTT 421 GTCACGGTTT GAGGGTAATA GAACAAAAGA GGCCATTATT GAATTTATCC AGACAAACAG 481 AGGTAGCCCT GCCTTTGATT TTAGCATATC ACAAACTCAA ACAGATCAAG TGAAGGATGA 541 GTTGTAAGAA GCAAGTGCAC CATCAACTTC GACCCGCCTT CAACTCTAGC CAGTCTCCAG 601 CACATCAGAT TTCAGGGTGA GCTATTATTC CTAGCTCGGA CTGGATTCTC TCCCTCACGT 661 CTTGATGTCT TGAAGTTCGG ACATGGACCG TTTTCTTTTT ACTTATTTTA GCTTCTTAAA 721 TACTCTTAGA TTTACTGAGG ATAGATGTTA TTGATGTGAT GACTTCCAGA TTTTGGGATT 781 AATAAATATT AAACTTTAGA AGTTTATTTA ATTGATTACG TTAATAAAAA AAAAA Predicted gene structure (within gDNA segment 1 to 5751): Exon 1 3816 4103 ( 288 n); cDNA 550 834 ( 285 n); score: 0.778 MATCH C08HBa0294K15.1+ SGN-E546219- 0.778 288 0.345 C PGS_C08HBa0294K15.1+_SGN-E546219- (3816 4103) Alignment (genomic DNA sequence = upper lines): AGCAAACGTG CCA-CAACTT CGACTCAACC GCAACTCTAG CCAGACTTCA GCATAATCAG 3874 ||||| | ||| |||||| |||| | | ||||||||| |||| || || ||| ||||| AGCAAGTGCA CCATCAACTT CGACCCGCCT TCAACTCTAG CCAGTCTCCA GCA-CATCAG 608 ATTTCA-GGT GAGCTATTGT TCCTAGCTCG GACTGGATTC TTTCTTTCAG GTCTTGATGT 3933 |||||| ||| |||||||| | |||||||||| |||||||||| | || ||| |||||||||| ATTTCAGGGT GAGCTATTAT TCCTAGCTCG GACTGGATTC TCTCCCTCAC GTCTTGATGT 668 CTTGAAGTTC GGACATGGAC C-ATCTC-TT TTATTTATTT TAGCTTCTTA GATACTCTTA 3991 |||||||||| |||||||||| | | || || ||| |||||| |||||||||| ||||||||| CTTGAAGTTC GGACATGGAC CGTTTTCTTT TTACTTATTT TAGCTTCTTA AATACTCTTA 728 GATTTAGTAA TTTGAGGATA GATGTTCTTG TGATGATGAC TTCCAGATTT TGGGGATAAT 4051 || || | | |||||||| |||||| ||| ||||||| |||||||||| | ||||| | GA-TT--T-A -CTGAGGATA GATGTTATTG ATGTGATGAC TTCCAGATTT T-GGGAT--T 780 GATAAGTTTT GAGTTTTAGA AG-TTAATT- ATTGATTTCG TTAATGAGTT TTAA 4103 |||| | || | |||||| || ||| || ||||||| || ||||| | || AATAAATATT AAACTTTAGA AGTTTATTTA ATTGATTACG TTAATAAAAA AAAA 834 hqPGS_C08HBa0294K15.1+_SGN-E546219- (3816 4103) ******************************************************************************** EST sequence 14 +strand 299 n (File: SGN-E373117+) 1 TCTTCTAGCT TGTCCAAATA CTGTCGTAAT TTTGGCAAAC GTACCGTCGT CTTCAACTCA 61 ACCGCAACTC TAGCCAGTCT TCATTACATC GGATTTCAGG GTGAGCTAAC GCTTCTAGCT 121 TGGACTGGAT CTTCTTCTTC ATGTCTTGAT GCCTTGAAGT TCCGGCATGG ACTAGCTGTT 181 TATGTATTTT AGCTTCTTAG ATACTCTTAG ATTTAGTAAT TTGAAGTAGA TGTTCTTGTG 241 ATGATGACTT CCAGATTTTG GGGATAATAA TAGTTGTTGA GTTTTTAGAA AAAAAAAAA Predicted gene structure (within gDNA segment 1527 to 4971): Exon 1 3818 4077 ( 260 n); cDNA 36 295 ( 260 n); score: 0.821 MATCH C08HBa0294K15.1+ SGN-E373117+ 0.821 260 0.870 C PGS_C08HBa0294K15.1+_SGN-E373117+ (3818 4077) Alignment (genomic DNA sequence = upper lines): CAAACGTGCC -ACAACTTCG ACTCAACCGC AACTCTAGCC AGACTTCAGC ATAATCAGAT 3876 ||||||| || | |||| |||||||||| |||||||||| || ||||| | ||| ||| CAAACGTACC GTCGTCTTCA ACTCAACCGC AACTCTAGCC AGTCTTCATT A-CATCGGAT 94 TTCAGG-TGA GCTATTGTTC CTAGCTCGGA CTGGATTCTT TCTTTCAGGT CTTGATGTCT 3935 |||||| ||| |||| | | |||||| ||| |||||| | | |||| || ||||||| || TTCAGGGTGA GCTAACGCTT CTAGCTTGGA CTGGATCTTC TTCTTCATGT CTTGATGCCT 154 TGAAGTTCGG ACATGGACCA TCTCTTTTAT TTATTTTAGC TTCTTAGATA CTCTTAGATT 3995 |||||||| | ||||||| | || ||||| ||||||||| |||||||||| |||||||||| TGAAGTTCCG GCATGGACTA GCT-GTTTAT GTATTTTAGC TTCTTAGATA CTCTTAGATT 213 TAGTAATTTG AGGATAGATG TTCTTGTGAT GATGACTTCC AGATTTTGGG GATAATGATA 4055 |||||||||| | | |||||| |||||||||| |||||||||| |||||||||| |||||| ||| TAGTAATTTG AAG-TAGATG TTCTTGTGAT GATGACTTCC AGATTTTGGG GATAATAATA 272 AGTTTTGAG- TTTTAGAAGT TAA 4077 | ||||| |||||||| || GTTGTTGAGT TTTTAGAAAA AAA 295 hqPGS_C08HBa0294K15.1+_SGN-E373117+ (3818 4077) ******************************************************************************** EST sequence 97 -strand 299 n (File: SGN-E373116-) 1 CTCTTCTAGC TTGTCCAAAT ACTGTCGTAA TTTTGGCAAA CGTACCGTCG TCTTCAACTC 61 AACCGCAACT CTAGCCAGTC TTCATTACAT CGGATTTCAG GGTGAGCTAA CGCTTCTAGC 121 TTGGACTGGA TCTTCTTCTT CATGTCTTGA TGCCTTGAAG TTCCGGCATG GACTAGCTGT 181 TTATGTATTT TAGCTTCTTA GATACTCTTA GATTTAGTAA TTTGAAGTAG ATGTTCTTGT 241 GATGATGACT TCCAGATTTT GGGGATAATA ATAGTTGTTG AGTTTTTAGA AAAAAAAAA Predicted gene structure (within gDNA segment 1507 to 4951): Exon 1 3818 4077 ( 260 n); cDNA 37 296 ( 260 n); score: 0.821 MATCH C08HBa0294K15.1+ SGN-E373116- 0.821 260 0.870 C PGS_C08HBa0294K15.1+_SGN-E373116- (3818 4077) Alignment (genomic DNA sequence = upper lines): CAAACGTGCC -ACAACTTCG ACTCAACCGC AACTCTAGCC AGACTTCAGC ATAATCAGAT 3876 ||||||| || | |||| |||||||||| |||||||||| || ||||| | ||| ||| CAAACGTACC GTCGTCTTCA ACTCAACCGC AACTCTAGCC AGTCTTCATT A-CATCGGAT 95 TTCAGG-TGA GCTATTGTTC CTAGCTCGGA CTGGATTCTT TCTTTCAGGT CTTGATGTCT 3935 |||||| ||| |||| | | |||||| ||| |||||| | | |||| || ||||||| || TTCAGGGTGA GCTAACGCTT CTAGCTTGGA CTGGATCTTC TTCTTCATGT CTTGATGCCT 155 TGAAGTTCGG ACATGGACCA TCTCTTTTAT TTATTTTAGC TTCTTAGATA CTCTTAGATT 3995 |||||||| | ||||||| | || ||||| ||||||||| |||||||||| |||||||||| TGAAGTTCCG GCATGGACTA GCT-GTTTAT GTATTTTAGC TTCTTAGATA CTCTTAGATT 214 TAGTAATTTG AGGATAGATG TTCTTGTGAT GATGACTTCC AGATTTTGGG GATAATGATA 4055 |||||||||| | | |||||| |||||||||| |||||||||| |||||||||| |||||| ||| TAGTAATTTG AAG-TAGATG TTCTTGTGAT GATGACTTCC AGATTTTGGG GATAATAATA 273 AGTTTTGAG- TTTTAGAAGT TAA 4077 | ||||| |||||||| || GTTGTTGAGT TTTTAGAAAA AAA 296 hqPGS_C08HBa0294K15.1+_SGN-E373116- (3818 4077) ******************************************************************************** EST sequence 40 +strand 219 n (File: SGN-E298638+) 1 TCATTACATC GGATTTCAGG GTGAGCTAAC GCTTCTAGCT TGGACTGGAT CTTCTTCTTC 61 ATGTCTTGAT GCCTTGAAGT TCCGGCATGG ACTAGCTGTT TATGTATTTT AGCTTCTTAG 121 ATACTCTTAG ATTTAGTAAT TTGAAGTACA TGTTCTTGTG ATGATGACTG CCAGATTTTG 181 GGGATAATAA TAGTTGTTGA GTTTTTAGAA AAAAAAAAA Predicted gene structure (within gDNA segment 2327 to 4971): Exon 1 3862 4077 ( 216 n); cDNA 1 215 ( 215 n); score: 0.815 MATCH C08HBa0294K15.1+ SGN-E298638+ 0.815 216 0.986 C PGS_C08HBa0294K15.1+_SGN-E298638+ (3862 4077) Alignment (genomic DNA sequence = upper lines): TCAGCATAAT CAGATTTCA- GGTGAGCTAT TGTTCCTAGC TCGGACTGGA TTCTTTCTTT 3920 ||| | || | ||||||| ||||||||| | | ||||| | |||||||| | | | || TCATTA-CAT CGGATTTCAG GGTGAGCTAA CGCTTCTAGC TTGGACTGGA TCTTCTTCTT 59 CAGGTCTTGA TGTCTTGAAG TTCGGACATG GACCATCTCT TTTATTTATT TTAGCTTCTT 3980 || ||||||| || ||||||| ||| | |||| ||| | || | || || |||| |||||||||| CATGTCTTGA TGCCTTGAAG TTCCGGCATG GACTAGCTGT TT-ATGTATT TTAGCTTCTT 118 AGATACTCTT AGATTTAGTA ATTTGAGGAT AGATGTTCTT GTGATGATGA CTTCCAGATT 4040 |||||||||| |||||||||| |||||| | | | |||||||| |||||||||| || ||||||| AGATACTCTT AGATTTAGTA ATTTGAAG-T ACATGTTCTT GTGATGATGA CTGCCAGATT 177 TTGGGGATAA TGATAAGTTT TGAG-TTTTA GAAGTTAA 4077 |||||||||| | ||| | | |||| ||||| ||| || TTGGGGATAA TAATAGTTGT TGAGTTTTTA GAAAAAAA 215 hqPGS_C08HBa0294K15.1+_SGN-E298638+ (3862 4077) ******************************************************************************** EST sequence 53 +strand 620 n (File: SGN-E238551+) 1 ACGCCTTTTG CTTTATGAAA CTAAAAAATA AAAATTGAAG TTTTGAAACG ATAGAGGTTT 61 AAAATTTGAA AGTCTGCTTA GAGAGTTAAG GCTTAGAAAG TTTAACTAAG ACGGAATCTT 121 AAAAGATTAA TATCTCAAAT TTGCAAAGTT TGGCTAAGTA AATCGTGATA AAAGTTCAAA 181 TAAATTTGCA AAGGGTAAAA ATAAAAATAA TCAAATAAGT TAGTCGTTGG AAAACCGTAT 241 TTAACGGAGT GTCTTAGGTG CCTTAAACAC CTTCCTAAGA CGCTAATAAG AATCCCGAAT 301 CCTAAAAAAT ATTTTCAAAA CGACTTTTCT GTTTAAATTG TTTTGAGAAT GAGTTTTCTT 361 GATTTTTCTT AAAAATTAAG TGGCGACTCC TAAAGTCGAA AAATACTTTA AAATAAAACA 421 AACTCTTTTC GAAAAATCAC CTTTTTTCGA TAAAACAAAG CTTCTAGCTT GGACTGGATC 481 TTCTTCTTCA TGTCTTGATG CCTTGAAGTT CCGGCATGGA CTAGCTGTTT ATGTATTTTA 541 GCTTCTTAGA TACTCTTAGA TTTAGTAATT CGAAGTAGAT GTTCTTGTGA TGATAACTTC 601 CAGATTTTGG GAAATAATAG Predicted gene structure (within gDNA segment 1 to 4745): Exon 1 3022 3031 ( 10 n); cDNA 451 460 ( 10 n); score: 1.000 Intron 1 3032 3892 ( 861 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.80) Exon 2 3893 4055 ( 163 n); cDNA 461 619 ( 159 n); score: 0.853 MATCH C08HBa0294K15.1+ SGN-E238551+ 0.853 173 0.279 C PGS_C08HBa0294K15.1+_SGN-E238551+ (3022 3031,3893 4055) Alignment (genomic DNA sequence = upper lines): TAAAACAAAG GGATTTTGAA AGAGGAGAAA ATTAAAAAAA AAAAGAAAAA GAAGGGAGAA 3081 |||||||||| TAAAACAAAG .......... .......... .......... .......... .......... 460 CGAGTGAGAG GGAGAGAAGA ACGAAGAGGA AAGCAAAGAA CTTGAGGAGT AGCTTGCGTG 3141 .......... .......... .......... .......... .......... .......... 460 ATCACGAATT CTTCGCTGGA GGTAGGTTAT GGTTTATGCT ATTTCATAGT AAACTCTTAA 3201 .......... .......... .......... .......... .......... .......... 460 TAGCGAATGA TATGTGTTGG GTAGTATTGT AAAGTCTTCT ATATGCTTAA TTGTGTGCTT 3261 .......... .......... .......... .......... .......... .......... 460 GCATGACGTG ATTATATAAT TGTGATAAAA TAAGCATGAT GAGGCTATTG AATCTTAAAC 3321 .......... .......... .......... .......... .......... .......... 460 CTTAAGACCT CTTTGTTAAT GATGATGCCT TGGTATAAAA GAAGGCTTGA TGAACTGAAA 3381 .......... .......... .......... .......... .......... .......... 460 GAATGAGAAT TAGGGGATCG GAGTGTCACG TTTCGACACC AGGATAGTAT GGATCGGGTG 3441 .......... .......... .......... .......... .......... .......... 460 TCACGTTCCG ACACCAGGAT AGTATAGATC GGGTGTCACG TTCCGACACC AGGATAGTAT 3501 .......... .......... .......... .......... .......... .......... 460 GGATCGGGTG TCACGTTTTG ACACCAGGAT AGTAAAGAGA ATGAATCTTG AATTATGCTA 3561 .......... .......... .......... .......... .......... .......... 460 ATATACTCAG ATTTAATGAA CCTGTTTCCC AAATGAGTAT GGTGTGGAGG CTTGAGTCCT 3621 .......... .......... .......... .......... .......... .......... 460 CATAGATGTG CTTGGGTTGT GCCCAATGGT TATGGTACTT GTTGTTGTCA CCTGTTTAGT 3681 .......... .......... .......... .......... .......... .......... 460 ATTGTAGTTG ATTTTATGTT ATTATCTGAT ATATATTGCT TTCTATTTTG AGTTGGCCGA 3741 .......... .......... .......... .......... .......... .......... 460 TGATACCTAC TCAGTACTTG TGCCTTGTAC TGACCCCTAC TTGTATGTTT CTTTCTTTGT 3801 .......... .......... .......... .......... .......... .......... 460 TATTTGTGGA GTGCAGCAAA CGTGCCACAA CTTCGACTCA ACCGCAACTC TAGCCAGACT 3861 .......... .......... .......... .......... .......... .......... 460 TCAGCATAAT CAGATTTCAG GTGAGCTATT GTTCCTAGCT CGGACTGGAT TCTTTCTTTC 3921 | |||||| ||||||||| | | ||| .......... .......... .......... .CTTCTAGCT TGGACTGGAT CTTCTTCTTC 489 AGGTCTTGAT GTCTTGAAGT TCGGACATGG ACCATCTCTT TTATTTATTT TAGCTTCTTA 3981 | |||||||| | |||||||| || | ||||| || | || | |||| ||||| |||||||||| ATGTCTTGAT GCCTTGAAGT TCCGGCATGG ACTAGCT-GT TTATGTATTT TAGCTTCTTA 548 GATACTCTTA GATTTAGTAA TTTGAGGATA GATGTTCTTG TGATGATGAC TTCCAGATTT 4041 |||||||||| |||||||||| || || | || |||||||||| ||||||| || |||||||||| GATACTCTTA GATTTAGTAA TTCGAAG-TA GATGTTCTTG TGATGATAAC TTCCAGATTT 607 TGGGGATAAT GATA 4055 | |||| ||| ||| T-GGGA-AAT AATA 619 hqPGS_C08HBa0294K15.1+_SGN-E238551+ (3893 4055) ******************************************************************************** EST sequence 49 +strand 286 n (File: SGN-E355114+) 1 TTAGGTTCGT TGGTCTCATC ACACAAGAAC AGGTCTAGTA GAGTCTTTAG GAACGGTAGG 61 GGGACGCCTT TACTTTTCTT TGAGAGGCTA TAAGACTTTA GGAAAATTTC ACCCTTTCAT 121 TCTTTCTTTC GTGCTACTAC TTGAGTCCAA TTGGTATCTA GGCGATACAA ATTGGTATCT 181 GACCATCTTC ACTCTCTTTT GCAGATGGTT AGAACTAGAG CAACGACCAC GTCAACACCA 241 ACACCGGCCA GACAAGAAAC AACTGAGCCA GCCACTGGGG CTGTGG Predicted gene structure (within gDNA segment 3638 to 5687): Exon 1 4238 4517 ( 280 n); cDNA 1 284 ( 284 n); score: 0.871 MATCH C08HBa0294K15.1+ SGN-E355114+ 0.871 280 0.979 C PGS_C08HBa0294K15.1+_SGN-E355114+ (4238 4517) Alignment (genomic DNA sequence = upper lines): TTAGGTTCGT TGGTCTCATC ACACAAGAAC AAGTCTAGTA GAGTCTTGAG GAATGGTAGG 4297 |||||||||| |||||||||| |||||||||| | |||||||| ||||||| || ||| |||||| TTAGGTTCGT TGGTCTCATC ACACAAGAAC AGGTCTAGTA GAGTCTTTAG GAACGGTAGG 60 GGGACGCCTT TACTTTTCTT TGAGAGGCTA TAAGACTTAA GGAAAA-TT- --CCATTCTT 4353 |||||||||| |||||||||| |||||||||| |||||||| | |||||| || || ||| | GGGACGCCTT TACTTTTCTT TGAGAGGCTA TAAGACTTTA GGAAAATTTC ACCCTTTCAT 120 TCTTTCTTTC GTGCTATTAC TTGGATCCAA TTGGTATCTA GGTGATACAA ATTGGTATCT 4413 |||||||||| |||||| ||| ||| ||||| |||||||||| || ||||||| |||||||||| TCTTTCTTTC GTGCTACTAC TTGAGTCCAA TTGGTATCTA GGCGATACAA ATTGGTATCT 180 GACCATCTTC ACTCTATTTC GCAGATGGTT AGAACTAGAG CAACAGCTGC GCCGACACCA 4473 |||||||||| ||||| ||| |||||||||| |||||||||| |||| | | | | |||||| GACCATCTTC ACTCTCTTTT GCAGATGGTT AGAACTAGAG CAACGACCAC GTCAACACCA 240 ACACCGGCAA AACAAGATGC GTCTGAACCA GCCACTGAGG CTGT 4517 |||||||| | |||||| | |||| ||| ||||||| || |||| ACACCGGCCA GACAAGAAAC AACTGAGCCA GCCACTGGGG CTGT 284 hqPGS_C08HBa0294K15.1+_SGN-E355114+ (4238 4517) ******************************************************************************** EST sequence 144 +strand 790 n (File: SGN-E356912+) 1 CAGGATCAAA CAATACGGAA GCCATGCAAT CACAAACTAG AAGATTACCT GTGATGACAG 61 CATCAGATGC CTCCGCTTCA GACCGCCCAG GGAAAGCGTA ACAATGGGCC CTATCGTTTG 121 TCTGCCCATT GCCCCTACCA TGTTGTGATG TAGTGGCCCC AGTTTGCCCA TTACCTCTGC 181 CGTTTTGGTG ACCACCATTA CCTCGACCAC CACGTCCTCC AGAATAACGG CCTCTACCAT 241 GACCACCTCT ACCTCTAGCT ATTGGGGGTC TATAACTTGG TCCAGGACAA TTTATCCTAA 301 TATGTCCAAT CTCCCCACAT CCATAACATT CTCTGGAGTC ACTCATAGGC CCCTTGGAGA 361 AGTGTTGACC GGTCTGAGGT GGACCCCCAA CTACAGTCTG TAGTGAAGAC TGAATGGGTC 421 GAGCCGAGTA ACCTCCGGAA CCTTGTCCTC TAGAGTAAGA ACCCTTAAAC TCACCTCCCT 481 TTCGAAACCT CTTTGATGTT GATGTCGTGG TGAAGTCGTC TGGCTTCACT CCTTCCACTT 541 CTATCACAAA GTCTACCACT TCTTGGAAGG ATTTTGCCGT TGCCGCTACC TGTAAGGCCG 601 AAATCCGCAA TTCTGACCTC AACCCCTTCA CAAACCGGAG AATCCGCTCT TGAGGACTGA 661 AACAGAGTTG AGTGGCATAT CCGGATAGTG CACGGAACTT AGCCTCATAA GCATTAACCG 721 ACATCCTACC TTGCTCTAGG CTCAGGAACT CATCTCTTTT CCTATCCCTC AAAGTCCGGG 781 GGATATACTT Predicted gene structure (within gDNA segment 6539 to 1): Exon 1 5939 5586 ( 354 n); cDNA 1 354 ( 354 n); score: 0.853 Intron 1 5585 5551 ( 35 n); Pd: 0.000 (s: 0.80), Pa: 0.000 (s: 0.86) Exon 2 5550 5114 ( 437 n); cDNA 355 790 ( 436 n); score: 0.854 MATCH C08HBa0294K15.1- SGN-E356912+ 0.853 791 1.001 C PGS_C08HBa0294K15.1-_SGN-E356912+ (5939 5586,5550 5114) Alignment (genomic DNA sequence = upper lines): CAGGATCAAA CAATACAGAA GCCATGCAAT CACAAACCAA AAGATTACCT GTGATGACGG 5880 |||||||||| |||||| ||| |||||||||| ||||||| | |||||||||| |||||||| | CAGGATCAAA CAATACGGAA GCCATGCAAT CACAAACTAG AAGATTACCT GTGATGACAG 60 CATCAGATGT CTCCGCTTCA GACCTCCCAG GGAAAGCATA ACAATGGGCC CTATCACCGG 5820 ||||||||| |||||||||| |||| ||||| ||||||| || |||||||||| ||||| | CATCAGATGC CTCCGCTTCA GACCGCCCAG GGAAAGCGTA ACAATGGGCC CTATCGTTTG 120 TCTGCCCGTT GCCCCTACAA TGTTGAGCTA CAGAAGTTCC AGTTTGCCTG TCACCCCGGC 5760 ||||||| || |||||||| | ||||| | | || | || |||||||| | ||| | || TCTGCCCATT GCCCCTACCA TGTTGTGATG TAGTGGCCCC AGTTTGCCCA TTACCTCTGC 180 CGTTTTGGTG ACCACCATTA CCTCGGCCAC CACGTCCTCC AGAATAGCGA CCTCTCCCAT 5700 |||||||||| |||||||||| ||||| |||| |||||||||| |||||| || ||||| |||| CGTTTTGGTG ACCACCATTA CCTCGACCAC CACGTCCTCC AGAATAACGG CCTCTACCAT 240 GACCACCTCT ACCTCTGACT ATTGGGGGTC TGTAACTCTG TTTTGGACAA TACCTCTTAA 5640 |||||||||| |||||| || |||||||||| | ||||| | | |||||| | || ||| GACCACCTCT ACCTCTAGCT ATTGGGGGTC TATAACTTGG TCCAGGACAA TTTATCCTAA 300 TATGTCCAGT CTCTCCACAT CCATAACACT CTCTTGATTA AAGCATAGGT CTCTATGAGA 5580 |||||||| | ||| |||||| |||||||| | |||| || | | |||||| | || TATGTCCAAT CTCCCCACAT CCATAACATT CTCTGGAGTC ACTCATAGGC CCCT...... 354 ACGACAGAGT CTGGGGATAA CCTCCAAACT CAGAGAAATG TTGACCGGTC TGCGGTGGAC 5520 | ||||| || |||||||||| || ||||||| .......... .......... .........T -GGAGAAGTG TTGACCGGTC TGAGGTGGAC 384 CCCCAGCTAC AGCTTGTAGT GAAGACTGAA TAGGTCGGGC TGGATAACCT CCTGAACTCT 5460 ||||| |||| || |||||| |||||||||| | ||||| || | |||||| || |||| | CCCCAACTAC AGTCTGTAGT GAAGACTGAA TGGGTCGAGC CGAGTAACCT CCGGAACCTT 444 GCCCTCTGGA TTAAAAACCA TTAAAATCAC CTCCTTTATG AAACTTCTTA GATATTGATG 5400 | ||||| || ||| |||| ||||| |||| |||| || | |||| |||| ||| |||||| GTCCTCTAGA GTAAGAACCC TTAAACTCAC CTCCCTTTCG AAACCTCTTT GATGTTGATG 504 CCATGGTGAA GTCGTCTGGC TTCACTCCCT CCACTTCTAT TACAAAATCT ACCACCTCCT 5340 | ||||||| |||||||||| |||||||| | |||||||||| ||||| ||| ||||| || | TCGTGGTGAA GTCGTCTGGC TTCACTCCTT CCACTTCTAT CACAAAGTCT ACCACTTCTT 564 GAAAGGATTT TGCTGCAGCA GCTACCTGTA AGGCTGAAAT CCGCAAATCT GACCTCAACC 5280 | |||||||| ||| | || |||||||||| |||| ||||| |||||| ||| |||||||||| GGAAGGATTT TGCCGTTGCC GCTACCTGTA AGGCCGAAAT CCGCAATTCT GACCTCAACC 624 CTTTCACGAA ACGACGAATC CGCTCTTGTG GACTGAAGCA AAGCTGGGTG GCATACCTGG 5220 | ||||| || || ||||| |||||||| | ||||||| || || || ||| ||||| | || CCTTCACAAA CCGGAGAATC CGCTCTTGAG GACTGAAACA GAGTTGAGTG GCATATCCGG 684 ATAGTGCACA AAACTTAGCC TCATAAGCAG TAACCGACAT CCTGCCTTGC TCTAAGCTCA 5160 ||||||||| ||||||||| ||||||||| |||||||||| ||| |||||| |||| ||||| ATAGTGCACG GAACTTAGCC TCATAAGCAT TAACCGACAT CCTACCTTGC TCTAGGCTCA 744 GGAACTTATC TCTCCTCCTA TCCCTCAAAG TCCGAGGTAT ATAATT 5114 |||||| ||| ||| ||||| |||||||||| |||| || || ||| || GGAACTCATC TCTTTTCCTA TCCCTCAAAG TCCGGGGGAT ATACTT 790 hqPGS_C08HBa0294K15.1-_SGN-E356912+ (5939 5586,5550 5114) ******************************************************************************** EST sequence 141 +strand 698 n (File: SGN-E356209+) 1 TTCAGACCGC CCAGGGAAAG CGTAACAATG GGCCCTATCG TTCGTCTGTC CGTTGCCCCT 61 ACCATGTTGT GATGTAGTGG CCCCAGTTTG CCCATTACCT CTGCCATTTT GGTGACCACC 121 ATTACCTCGA CCACCACGTC CTCCAGAATA ACGGCCTCTA CCATGACCAC CTCTACCTCT 181 AGCTATTGGG GGTCTATAAC TTTGTCTGGG ACAATTTTTC CTAATATGTC CAATCTCCCC 241 ACATCCATAA CATTCTCTGG AGTCAAGCAT AGGCCCCTCG GAGAAGTGTT AACCGGTCTG 301 AGGTGGTCTC CCAACTACAG TCTGTAGTGA AGACTGAATT GGTCGGACTG AGTAACTTCC 361 CGAACCCTGT CCTCTAGTGT AAGAACCATT AAACTCACCT CCCTTCCGAA ACCTTTTTGA 421 TGTCGATGTT GTGGTGAAGT CGTCTGGCTT CACTCCTTCC ACTTCTATCA CAAAGTCTAC 481 CACTTCTTGG AAGGATTTTG CCGTTGCCGC TATCTGTAAG GACGAAATCC GCAATTCTGA 541 CCTCAACCCC TTCACAAACC GGCGAATCCG CTCTTGAGGA CTGAAACAGA GTTGAGTGGC 601 ATATCTGGAT AGTGCACGAA ACTTAGCCTC ATAAGCATTA ACCGACATCC TACCTTGCTC 661 TAGGCTCAAG AACTCATCCC TTTTCCTATC CCTCAAAG Predicted gene structure (within gDNA segment 7417 to 1): Exon 1 5863 5587 ( 277 n); cDNA 1 277 ( 277 n); score: 0.841 Intron 1 5586 5551 ( 36 n); Pd: 0.000 (s: 0.84), Pa: 0.000 (s: 0.82) Exon 2 5550 5130 ( 421 n); cDNA 278 698 ( 421 n); score: 0.843 MATCH C08HBa0294K15.1- SGN-E356209+ 0.842 698 1.000 C PGS_C08HBa0294K15.1-_SGN-E356209+ (5863 5587,5550 5130) Alignment (genomic DNA sequence = upper lines): TTCAGACCTC CCAGGGAAAG CATAACAATG GGCCCTATCA CCGGTCTGCC CGTTGCCCCT 5804 |||||||| | |||||||||| | |||||||| ||||||||| ||||| | |||||||||| TTCAGACCGC CCAGGGAAAG CGTAACAATG GGCCCTATCG TTCGTCTGTC CGTTGCCCCT 60 ACAATGTTGA GCTACAGAAG TTCCAGTTTG CCTGTCACCC CGGCCGTTTT GGTGACCACC 5744 || |||||| | | || | |||||||| || | ||| | ||| |||| |||||||||| ACCATGTTGT GATGTAGTGG CCCCAGTTTG CCCATTACCT CTGCCATTTT GGTGACCACC 120 ATTACCTCGG CCACCACGTC CTCCAGAATA GCGACCTCTC CCATGACCAC CTCTACCTCT 5684 ||||||||| |||||||||| |||||||||| || ||||| |||||||||| |||||||||| ATTACCTCGA CCACCACGTC CTCCAGAATA ACGGCCTCTA CCATGACCAC CTCTACCTCT 180 GACTATTGGG GGTCTGTAAC TCTGTTTTGG ACAATACCTC TTAATATGTC CAGTCTCTCC 5624 |||||||| ||||| |||| | ||| | || ||||| || ||||||||| || |||| || AGCTATTGGG GGTCTATAAC TTTGTCTGGG ACAATTTTTC CTAATATGTC CAATCTCCCC 240 ACATCCATAA CACTCTCTTG ATTAAAGCAT AGGTCTCTAT GAGAACGACA GAGTCTGGGG 5564 |||||||||| || ||||| | | | |||||| ||| | | ACATCCATAA CATTCTCTGG AGTCAAGCAT AGGCCCC... .......... .......... 277 ATAACCTCCA AACTCAGAGA AATGTTGACC GGTCTGCGGT GGACCCCCAG CTACAGCTTG 5504 || |||| | |||| ||| |||||| ||| || | |||| |||||| || .......... ...TCGGAGA AGTGTTAACC GGTCTGAGGT GGTCTCCCAA CTACAGTCTG 324 TAGTGAAGAC TGAATAGGTC GGGCTGGATA ACCTCCTGAA CTCTGCCCTC TGGATTAAAA 5444 |||||||||| ||||| |||| || ||| || || ||| ||| | ||| |||| | | ||| | TAGTGAAGAC TGAATTGGTC GGACTGAGTA ACTTCCCGAA CCCTGTCCTC TAGTGTAAGA 384 ACCATTAAAA TCACCTCCTT TATGAAACTT CTTAGATATT GATGCCATGG TGAAGTCGTC 5384 ||||||||| |||||||| | | ||||| | || ||| | |||| ||| |||||||||| ACCATTAAAC TCACCTCCCT TCCGAAACCT TTTTGATGTC GATGTTGTGG TGAAGTCGTC 444 TGGCTTCACT CCCTCCACTT CTATTACAAA ATCTACCACC TCCTGAAAGG ATTTTGCTGC 5324 |||||||||| || ||||||| |||| ||||| |||||||| || || |||| ||||||| | TGGCTTCACT CCTTCCACTT CTATCACAAA GTCTACCACT TCTTGGAAGG ATTTTGCCGT 504 AGCAGCTACC TGTAAGGCTG AAATCCGCAA ATCTGACCTC AACCCTTTCA CGAAACGACG 5264 || |||| | ||||||| | |||||||||| ||||||||| ||||| |||| | || || || TGCCGCTATC TGTAAGGACG AAATCCGCAA TTCTGACCTC AACCCCTTCA CAAACCGGCG 564 AATCCGCTCT TGTGGACTGA AGCAAAGCTG GGTGGCATAC CTGGATAGTG CACAAAACTT 5204 |||||||||| || ||||||| | || || || |||||||| |||||||||| ||| |||||| AATCCGCTCT TGAGGACTGA AACAGAGTTG AGTGGCATAT CTGGATAGTG CACGAAACTT 624 AGCCTCATAA GCAGTAACCG ACATCCTGCC TTGCTCTAAG CTCAGGAACT TATCTCTCCT 5144 |||||||||| ||| |||||| ||||||| || |||||||| | |||| ||||| ||| || | AGCCTCATAA GCATTAACCG ACATCCTACC TTGCTCTAGG CTCAAGAACT CATCCCTTTT 684 CCTATCCCTC AAAG 5130 |||||||||| |||| CCTATCCCTC AAAG 698 hqPGS_C08HBa0294K15.1-_SGN-E356209+ (5863 5587,5550 5130) ******************************************************************************** EST sequence 127 +strand 694 n (File: SGN-E353359+) 1 TGTAGTCTAT GCACATTCAA AAACTGCCGA TCTTTACAAC AAAACCGGAG CACCCCAAGG 61 AGATGCACTT GGTCTAATGA AGCCTTTGTT CAATAACTCT TGAAGTTGTG CCTTTAACTC 121 TCTTAACTCT GCGGGAGCCA TTCTATAAGG GGGTATAAAA ATGGGGCGTG TGCCCGGTTC 181 GAGATCAATA CAGAAGTCAA TATCCCTATC CGGTGGCATA CCAGGATGAT CTGCAGGGAA 241 CACATCCATA AACTCACGAA CTACTGAAAC TGAGTCAATC GAAGGTACTT GGGTAGTGTT 301 ATCCTTGAGA TGTGCCAAGA AAGCTAAACA CCCTTTACTA ACCATTTTCT TAGCACGAAG 361 AAAGGAGATG ATACGCACCG GATTGGAAGT GTAGTCACCC TCCTACACTA ACAGATCTGT 421 CCCAGGCTTG GCTAACGTCA CGGTTTTAGC ATTACAATCC AAGATTGCAA AATTTGGAGA 481 AAGCCAAGTC ATACCCAGAA TTACATCGAA GTCAACCATT TCTTGCAAGG ATTTTGCCGT 541 AGCCGCTACC TGTAACGCTG AAATCCGCAA CTCTGACCTC AACCCTTTCA CAAAACGACG 601 AATCCTCTCT TGTGGACTGA AACAAAGTTG AGTGGCATAT CTGGATAGTG CACGAAACTT 661 AGCCTCATAT GCATTGACCT ACATCCTACC TTGC Predicted gene structure (within gDNA segment 10366 to 3801): Exon 1 6596 6121 ( 476 n); cDNA 48 523 ( 476 n); score: 0.889 Intron 1 6120 5341 ( 780 n); Pd: 0.000 (s: 0.98), Pa: 0.000 (s: 0.88) Exon 2 5340 5170 ( 171 n); cDNA 524 694 ( 171 n); score: 0.895 MATCH C08HBa0294K15.1- SGN-E353359+ 0.890 647 0.932 C PGS_C08HBa0294K15.1-_SGN-E353359+ (6596 6121,5340 5170) Alignment (genomic DNA sequence = upper lines): GAGCACCCCA AGGGGATGCA CTTGGTCTAA TAAAGCCTTT GCTTAACAAC TCTTGAAGTT 6537 |||||||||| ||| |||||| |||||||||| | |||||||| | | || ||| |||||||||| GAGCACCCCA AGGAGATGCA CTTGGTCTAA TGAAGCCTTT GTTCAATAAC TCTTGAAGTT 107 GGGCCTTTAA CTCTCTTAAC TCAGCGGGAG CCATCCTATA ATGGGGTATG GAAATGGGGC 6477 | |||||||| |||||||||| || ||||||| |||| ||||| | ||||||| ||||||||| GTGCCTTTAA CTCTCTTAAC TCTGCGGGAG CCATTCTATA AGGGGGTATA AAAATGGGGC 167 GAGTACCCGG CTCCAGATCA ATACAGAAAT AAATATCTCT ATTCGGTGGC ATACGAGGAA 6417 | || ||||| || |||||| |||||||| | |||||| || || ||||||| |||| |||| GTGTGCCCGG TTCGAGATCA ATACAGAAGT CAATATCCCT ATCCGGTGGC ATACCAGGAT 227 GGTCTGCAGG AAACACATCT AGAAACTCAC GGACTATCGA AATCGACTCA ATTGAAGGTA 6357 | |||||||| |||||||| | |||||||| | |||| || || || ||| || ||||||| GATCTGCAGG GAACACATCC ATAAACTCAC GAACTACTGA AACTGAGTCA ATCGAAGGTA 287 CTTGGGTAGT ATCATCCTAG AGGTGTGTCA AGAAAGCTAA ACAACCCTTA CTAACCATTC 6297 |||||||||| | ||||| | || |||| || |||||||||| ||| || ||| ||||||||| CTTGGGTAGT GTTATCCTTG AGATGTGCCA AGAAAGCTAA ACACCCTTTA CTAACCATTT 347 TCTTAGCACG AAGAAAGGAG ATAATACGAA ATGGAGTGGA AGTGTAGTCA CCCTCCCACA 6237 |||||||||| |||||||||| || ||||| | ||| |||| |||||||||| |||||| ||| TCTTAGCACG AAGAAAGGAG ATGATACGCA CCGGATTGGA AGTGTAGTCA CCCTCCTACA 407 CTAACGGATC TGTCCCAGGC TTGGCCGACG TTACAGTTTT AGCATTACAA TCTAAGATTG 6177 ||||| |||| |||||||||| ||||| ||| | || ||||| |||||||||| || ||||||| CTAACAGATC TGTCCCAGGC TTGGCTAACG TCACGGTTTT AGCATTACAA TCCAAGATTG 467 CAAAATTTGG AGACAGCCAA GTCATACCCA GAATTACATC GAAGTCAACC ATTTCTAAGA 6117 |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| |||||| CAAAATTTGG AGAAAGCCAA GTCATACCCA GAATTACATC GAAGTCAACC ATTTCT.... 523 TAACCAAGTC TACATGAGTA TTGTTCCCCA CAAAAGTCAC AAGACAAGAC CTATACACTT 6057 .......... .......... .......... .......... .......... .......... 523 TTTCAACTAT CACAGACTCA CCCACCGGAG TAGAAACACG AATAGGTATG TCAAGCAATT 5997 .......... .......... .......... .......... .......... .......... 523 CATAATGTAA ATTAAGACCA GTAGCAAATG AGGAAGATAC ATATGAAAAT GTGGATCCAG 5937 .......... .......... .......... .......... .......... .......... 523 GATCAAACAA TACAGAAGCC ATGCAATCAC AAACCAAAAG ATTACCTGTG ATGACGGCAT 5877 .......... .......... .......... .......... .......... .......... 523 CAGATGTCTC CGCTTCAGAC CTCCCAGGGA AAGCATAACA ATGGGCCCTA TCACCGGTCT 5817 .......... .......... .......... .......... .......... .......... 523 GCCCGTTGCC CCTACAATGT TGAGCTACAG AAGTTCCAGT TTGCCTGTCA CCCCGGCCGT 5757 .......... .......... .......... .......... .......... .......... 523 TTTGGTGACC ACCATTACCT CGGCCACCAC GTCCTCCAGA ATAGCGACCT CTCCCATGAC 5697 .......... .......... .......... .......... .......... .......... 523 CACCTCTACC TCTGACTATT GGGGGTCTGT AACTCTGTTT TGGACAATAC CTCTTAATAT 5637 .......... .......... .......... .......... .......... .......... 523 GTCCAGTCTC TCCACATCCA TAACACTCTC TTGATTAAAG CATAGGTCTC TATGAGAACG 5577 .......... .......... .......... .......... .......... .......... 523 ACAGAGTCTG GGGATAACCT CCAAACTCAG AGAAATGTTG ACCGGTCTGC GGTGGACCCC 5517 .......... .......... .......... .......... .......... .......... 523 CAGCTACAGC TTGTAGTGAA GACTGAATAG GTCGGGCTGG ATAACCTCCT GAACTCTGCC 5457 .......... .......... .......... .......... .......... .......... 523 CTCTGGATTA AAAACCATTA AAATCACCTC CTTTATGAAA CTTCTTAGAT ATTGATGCCA 5397 .......... .......... .......... .......... .......... .......... 523 TGGTGAAGTC GTCTGGCTTC ACTCCCTCCA CTTCTATTAC AAAATCTACC ACCTCCTGAA 5337 || | .......... .......... .......... .......... .......... ......TGCA 527 AGGATTTTGC TGCAGCAGCT ACCTGTAAGG CTGAAATCCG CAAATCTGAC CTCAACCCTT 5277 |||||||||| | ||| ||| |||||||| | |||||||||| ||| |||||| |||||||||| AGGATTTTGC CGTAGCCGCT ACCTGTAACG CTGAAATCCG CAACTCTGAC CTCAACCCTT 587 TCACGAAACG ACGAATCCGC TCTTGTGGAC TGAAGCAAAG CTGGGTGGCA TACCTGGATA 5217 |||| ||||| |||||||| | |||||||||| |||| ||||| || |||||| || ||||||| TCACAAAACG ACGAATCCTC TCTTGTGGAC TGAAACAAAG TTGAGTGGCA TATCTGGATA 647 GTGCACAAAA CTTAGCCTCA TAAGCAGTAA CCGACATCCT GCCTTGC 5170 |||||| ||| |||||||||| || ||| | | || ||||||| |||||| GTGCACGAAA CTTAGCCTCA TATGCATTGA CCTACATCCT ACCTTGC 694 hqPGS_C08HBa0294K15.1-_SGN-E353359+ (6596 6121,5340 5170) ******************************************************************************** EST sequence 122 +strand 433 n (File: SGN-E352180+) 1 CCCTTGAAGA CCGGAGGTTT CAATTTCAAG AACTTACTGA AAAGTTCATG CTGATCATTT 61 GTCATTATAG GCCCAGTAGT CAAACGTGGA AATGTACCTA TGTGCAATGG AACATCCATG 121 CGGGGAGCCA TAGTAGCCGC ATGTTGTACT TCTGAAACCG GAGGTGTTGG CGCAGAAAAC 181 ACTGGAGGTG CTTGACCTTG ATCAGATAAA CCGCTAAGAT AAGCCAGAAC CTGATTGATC 241 ATCTCTGGGG TAGGTTGGGG TGGCATTTCC TCATTTTGCA CTTGTTCAGT TTCCCCATCC 301 TCCCCTTCTC TTATTACTTC CTCAGTCGGT GGAGGAGTCA CCGCCCTAGT ACCAGATGGG 361 CTCGGTTCTC GTTCTCTTCC TCTAGATGAC GTCCTCCCAC GACCTCTACC ACGGCCCCTT 421 GCCGCTGTTC TCC Predicted gene structure (within gDNA segment 5724 to 3146): Exon 1 4908 4556 ( 353 n); cDNA 1 353 ( 353 n); score: 0.875 MATCH C08HBa0294K15.1- SGN-E352180+ 0.875 353 0.815 C PGS_C08HBa0294K15.1-_SGN-E352180+ (4908 4556) Alignment (genomic DNA sequence = upper lines): CCCTTGAAAA CTGGAGGTTT CAACTTCAAG AACTTACTGA AAAGTTCGTG CTGGTCACTT 4849 |||||||| | | |||||||| ||| |||||| |||||||||| ||||||| || ||| ||| || CCCTTGAAGA CCGGAGGTTT CAATTTCAAG AACTTACTGA AAAGTTCATG CTGATCATTT 60 GTCATTATAG GCCCTGTAGT CAACCGAGGA AACGTGCCTA TTTCCAATGA GGCATCCATG 4789 |||||||||| |||| ||||| ||| || ||| || || |||| | | ||||| |||||||| GTCATTATAG GCCCAGTAGT CAAACGTGGA AATGTACCTA TGTGCAATGG AACATCCATG 120 CGGGGAGCCA CAGCAGCTGT ATGTTGTACT CCCGGAACCT GAGGTACTGG TGCAGAAAAC 4729 |||||||||| || ||| | |||||||||| | | |||| ||||| ||| ||||||||| CGGGGAGCCA TAGTAGCCGC ATGTTGTACT TCTGAAACCG GAGGTGTTGG CGCAGAAAAC 180 ACTGGAGGTG TCTGGCCTTG ATCAGATAAC CCGCTAAGAT AAGCAAGAAC CTGATTAATC 4669 |||||||||| || ||||| ||||||||| |||||||||| |||| ||||| |||||| ||| ACTGGAGGTG CTTGACCTTG ATCAGATAAA CCGCTAAGAT AAGCCAGAAC CTGATTGATC 240 ATCTCTAGGG TAGGTTGGGG TGGTAATTCC TCGTTCTGCA CTTGTTCATT TCCCCCTTCC 4609 |||||| ||| |||||||||| ||| | |||| || || |||| |||||||| | | |||| ||| ATCTCTGGGG TAGGTTGGGG TGGCATTTCC TCATTTTGCA CTTGTTCAGT TTCCCCATCC 300 TCACCCTCTC TTAATACTTC CTCAGTCGGT GGAGGAGTCA CCGCCCTAGT ACC 4556 || || |||| ||| |||||| |||||||||| |||||||||| |||||||||| ||| TCCCCTTCTC TTATTACTTC CTCAGTCGGT GGAGGAGTCA CCGCCCTAGT ACC 353 hqPGS_C08HBa0294K15.1-_SGN-E352180+ (4908 4556) ******************************************************************************** EST sequence 115 +strand 763 n (File: SGN-E214046+) 1 ACGAATAGGC ATATCAAGAA ATTCACAATG TAAATTTAGA CCATTAGCAA ATGAGGAAGA 61 TACATAAGAA AACGTGGATC CAGGATCAAA CAATACGGAA GCCATGCAAT CACAAACAAG 121 AAGATTACCT GTGATGACAG CATCAGATGC CTCCGCTTTA GACCGCCCAG GGAAAGCGTA 181 ACAATGGGCC CTATAGTTTG TTTGTCCATT GCCCCTACCA TGTCGTGATG TAGTGGCCCC 241 AGTTTGTCCA TTACCTCTGC CGTTTTGGTG ACCACCATTG CCTCGACCAC CACGTCCTCC 301 AAAATAACGG CCTCTACCAT GACAACCTCT ACCTCTAACT ATTGGGGGTC TATAACTTGG 361 TCCGGGAAAA TTTCTCCTAA TATGTCCAAT CTCCCCACAT CCATAACATT CTCTAGAGTC 421 ACTCATAGGC CCCTCGGAGA AGTGTTGACC GGTCTGAGGT GGACCCCCAA CTACAGTTTG 481 TAGTGAAGAC TGAATGGGTC GAACTGAGTA ACCTCCAGAA CCTTGTCCTC TAGAGTAAGA 541 ACCCTTAAAC TCATCTCCCC TTTGAAACCT CATCGATGTC GATGTCGTGG TGAAGTCGTC 601 TGGTTTCACT CCTTCCACTT CTATCAAAAA GTCTACCACT TCTTGGAAGG ATTTTGCCGT 661 TGCCGCTACC TGTAAGGGCG AAATCCGCAA TTCTGACCTC AACCCCTTCA CAACCGGCGA 721 ATCCGCTCTT GAGGGACTGA ACAGAGTTGA GTGGCATATC TGG Predicted gene structure (within gDNA segment 7015 to 1): Exon 1 6019 5587 ( 433 n); cDNA 1 433 ( 433 n); score: 0.843 Intron 1 5586 5551 ( 36 n); Pd: 0.000 (s: 0.80), Pa: 0.000 (s: 0.90) Exon 2 5550 5220 ( 331 n); cDNA 434 763 ( 330 n); score: 0.826 MATCH C08HBa0294K15.1- SGN-E214046+ 0.836 764 1.001 C PGS_C08HBa0294K15.1-_SGN-E214046+ (6019 5587,5550 5220) Alignment (genomic DNA sequence = upper lines): ACGAATAGGT ATGTCAAGCA ATTCATAATG TAAATTAAGA CCAGTAGCAA ATGAGGAAGA 5960 ||||||||| || ||||| | ||||| |||| |||||| ||| ||| |||||| |||||||||| ACGAATAGGC ATATCAAGAA ATTCACAATG TAAATTTAGA CCATTAGCAA ATGAGGAAGA 60 TACATATGAA AATGTGGATC CAGGATCAAA CAATACAGAA GCCATGCAAT CACAAACCAA 5900 |||||| ||| || ||||||| |||||||||| |||||| ||| |||||||||| ||||||| | TACATAAGAA AACGTGGATC CAGGATCAAA CAATACGGAA GCCATGCAAT CACAAACAAG 120 AAGATTACCT GTGATGACGG CATCAGATGT CTCCGCTTCA GACCTCCCAG GGAAAGCATA 5840 |||||||||| |||||||| | ||||||||| |||||||| | |||| ||||| ||||||| || AAGATTACCT GTGATGACAG CATCAGATGC CTCCGCTTTA GACCGCCCAG GGAAAGCGTA 180 ACAATGGGCC CTATCACCGG TCTGCCCGTT GCCCCTACAA TGTTGAGCTA CAGAAGTTCC 5780 |||||||||| |||| | | || || || |||||||| | ||| | | | || | || ACAATGGGCC CTATAGTTTG TTTGTCCATT GCCCCTACCA TGTCGTGATG TAGTGGCCCC 240 AGTTTGCCTG TCACCCCGGC CGTTTTGGTG ACCACCATTA CCTCGGCCAC CACGTCCTCC 5720 |||||| | | ||| | || |||||||||| ||||||||| ||||| |||| |||||||||| AGTTTGTCCA TTACCTCTGC CGTTTTGGTG ACCACCATTG CCTCGACCAC CACGTCCTCC 300 AGAATAGCGA CCTCTCCCAT GACCACCTCT ACCTCTGACT ATTGGGGGTC TGTAACTCTG 5660 | |||| || ||||| |||| ||| |||||| |||||| ||| |||||||||| | ||||| | AAAATAACGG CCTCTACCAT GACAACCTCT ACCTCTAACT ATTGGGGGTC TATAACTTGG 360 TTTTGGACAA TACCTCTTAA TATGTCCAGT CTCTCCACAT CCATAACACT CTCTTGATTA 5600 | ||| || | ||| ||| |||||||| | ||| |||||| |||||||| | |||| || | TCCGGGAAAA TTTCTCCTAA TATGTCCAAT CTCCCCACAT CCATAACATT CTCTAGAGTC 420 AAGCATAGGT CTCTATGAGA ACGACAGAGT CTGGGGATAA CCTCCAAACT CAGAGAAATG 5540 | |||||| | | | | ||||| || ACTCATAGGC CCC....... .......... .......... .........T CGGAGAAGTG 444 TTGACCGGTC TGCGGTGGAC CCCCAGCTAC AGCTTGTAGT GAAGACTGAA TAGGTCGGGC 5480 |||||||||| || ||||||| ||||| |||| || ||||||| |||||||||| | ||||| | TTGACCGGTC TGAGGTGGAC CCCCAACTAC AGTTTGTAGT GAAGACTGAA TGGGTCGAAC 504 TGGATAACCT CCTGAACTCT GCCCTCTGGA TTAAAAACCA TTAAAATCAC CTCCTTTATG 5420 || |||||| || |||| | | ||||| || ||| |||| ||||| ||| |||| | || TGAGTAACCT CCAGAACCTT GTCCTCTAGA GTAAGAACCC TTAAACTCAT CTCCCCTTTG 564 AAACTTCTTA GATATTGATG CCATGGTGAA GTCGTCTGGC TTCACTCCCT CCACTTCTAT 5360 |||| || | ||| | |||| | ||||||| ||||||||| |||||||| | |||||||||| AAACCTCATC GATGTCGATG TCGTGGTGAA GTCGTCTGGT TTCACTCCTT CCACTTCTAT 624 TACAAAATCT ACCACCTCCT GAAAGGATTT TGCTGCAGCA GCTACCTGTA AGGCTGAAAT 5300 | ||| ||| ||||| || | | |||||||| ||| | || |||||||||| ||| ||||| CAAAAAGTCT ACCACTTCTT GGAAGGATTT TGCCGTTGCC GCTACCTGTA AGGGCGAAAT 684 CCGCAAATCT GACCTCAACC CTTTCACGAA ACGACGAATC CGCTCTTG-T GGACTGAAGC 5241 |||||| ||| |||||||||| | ||||| || || |||||| |||||||| |||||||| | CCGCAATTCT GACCTCAACC CCTTCAC-AA CCGGCGAATC CGCTCTTGAG GGACTGAA-C 742 AAAGCTGGGT GGCATACCTG G 5220 | || || || |||||| ||| | AGAGTTGAGT GGCATATCTG G 763 hqPGS_C08HBa0294K15.1-_SGN-E214046+ (6019 5587,5550 5220) ******************************************************************************** EST sequence 105 +strand 533 n (File: SGN-E353805+) 1 GGATCAACAA TACGGAAGCC ATGCAATCAC AAACTAGAAG ATTACCTGTG ATGACAGCAT 61 CAGATGCCTC CGCTTCAGAC CGCCCAGGGA AAGCGTAACA ATGGGCCCTA TCGTTTGTCT 121 GCCCATTGCC CCTACCATGT TGTGATGTAG TGGCCCCAGT TTGCCCATTA CCTCTGCCGT 181 TTTGGTGACC ACCATTACCT CGACCACCAC GTCCTCCAGA ATAACGGCCT CTACCATGAC 241 CACCTCTACC TCTAGCTATT GGGGGTCTAT AACTTGGTCC AGGACAATTT ATCCTAATAT 301 GTCCAATCTC CCCACATCCA TAACATTCTC TGGAGTCACT CATAGGCCCC TTGGAGAAGT 361 GTTGACCGGT CTGAGGTGGA CCCCCAACTA CAGTCTGTAG TGAAGACTGA ATGGGTCGAG 421 CCGAGTAACC TCCGGAACCT TGTCCTCTAA AGTAAGAACC CTTAAACTCA CCTCCCTTTC 481 GAAACCTCTT TGATGTTGAT GTCGTGGTGA AGTCGTCTGG CTTCACTCCT TCC Predicted gene structure (within gDNA segment 6662 to 2274): Exon 1 5937 5586 ( 352 n); cDNA 1 351 ( 351 n); score: 0.849 Intron 1 5585 5551 ( 35 n); Pd: 0.000 (s: 0.80), Pa: 0.000 (s: 0.86) Exon 2 5550 5368 ( 183 n); cDNA 352 533 ( 182 n); score: 0.831 MATCH C08HBa0294K15.1- SGN-E353805+ 0.843 535 1.004 C PGS_C08HBa0294K15.1-_SGN-E353805+ (5937 5586,5550 5368) Alignment (genomic DNA sequence = upper lines): GGATCAAACA ATACAGAAGC CATGCAATCA CAAACCAAAA GATTACCTGT GATGACGGCA 5878 ||||| |||| |||| ||||| |||||||||| ||||| | || |||||||||| |||||| ||| GGATC-AACA ATACGGAAGC CATGCAATCA CAAACTAGAA GATTACCTGT GATGACAGCA 59 TCAGATGTCT CCGCTTCAGA CCTCCCAGGG AAAGCATAAC AATGGGCCCT ATCACCGGTC 5818 ||||||| || |||||||||| || ||||||| ||||| |||| |||||||||| ||| ||| TCAGATGCCT CCGCTTCAGA CCGCCCAGGG AAAGCGTAAC AATGGGCCCT ATCGTTTGTC 119 TGCCCGTTGC CCCTACAATG TTGAGCTACA GAAGTTCCAG TTTGCCTGTC ACCCCGGCCG 5758 ||||| |||| |||||| ||| ||| | | | | | |||| |||||| | ||| | |||| TGCCCATTGC CCCTACCATG TTGTGATGTA GTGGCCCCAG TTTGCCCATT ACCTCTGCCG 179 TTTTGGTGAC CACCATTACC TCGGCCACCA CGTCCTCCAG AATAGCGACC TCTCCCATGA 5698 |||||||||| |||||||||| ||| |||||| |||||||||| |||| || || ||| |||||| TTTTGGTGAC CACCATTACC TCGACCACCA CGTCCTCCAG AATAACGGCC TCTACCATGA 239 CCACCTCTAC CTCTGACTAT TGGGGGTCTG TAACTCTGTT TTGGACAATA CCTCTTAATA 5638 |||||||||| |||| |||| ||||||||| ||||| || ||||||| || ||||| CCACCTCTAC CTCTAGCTAT TGGGGGTCTA TAACTTGGTC CAGGACAATT TATCCTAATA 299 TGTCCAGTCT CTCCACATCC ATAACACTCT CTTGATTAAA GCATAGGTCT CTATGAGAAC 5578 |||||| ||| | |||||||| |||||| ||| || || | | |||||| | || TGTCCAATCT CCCCACATCC ATAACATTCT CTGGAGTCAC TCATAGGCCC CT........ 351 GACAGAGTCT GGGGATAACC TCCAAACTCA GAGAAATGTT GACCGGTCTG CGGTGGACCC 5518 | ||||| |||| |||||||||| ||||||||| .......... .......... .......T-G GAGAAGTGTT GACCGGTCTG AGGTGGACCC 383 CCAGCTACAG CTTGTAGTGA AGACTGAATA GGTCGGGCTG GATAACCTCC TGAACTCTGC 5458 ||| |||||| |||||||| ||||||||| ||||| || | |||||||| |||| || CCAACTACAG TCTGTAGTGA AGACTGAATG GGTCGAGCCG AGTAACCTCC GGAACCTTGT 443 CCTCTGGATT AAAAACCATT AAAATCACCT CCTTTATGAA ACTTCTTAGA TATTGATGCC 5398 ||||| | | || |||| || ||| |||||| || || ||| || |||| || | |||||| | CCTCTAAAGT AAGAACCCTT AAACTCACCT CCCTTTCGAA ACCTCTTTGA TGTTGATGTC 503 ATGGTGAAGT CGTCTGGCTT CACTCCCTCC 5368 ||||||||| |||||||||| |||||| ||| GTGGTGAAGT CGTCTGGCTT CACTCCTTCC 533 hqPGS_C08HBa0294K15.1-_SGN-E353805+ (5937 5586,5550 5368) ******************************************************************************** EST sequence 67 -strand 554 n (File: SGN-E329287-) 1 AGAATGATGC CCAAGTCATA CGTGGTGCCT CTGTTGGTTG ACACTCAACA TGTGACCGCC 61 ACCACATTTT GGCGTTCCCT TGAAACTGAT AAGTCACAAA CTCAACACCA AACCGTTCTA 121 CTATACCCAT CTTGTGTAGT AGCTCATGAC AGTCAACCAG AAAATCGTAG GCATCCTCAG 181 ATTCAACACC CTTGTAGACT TGAGGTTTCA ATTTCAAGAA CTTACTAAAA AGTTCATGCT 241 GATCATTTGT CATTATAGGC CCTGTAGTCA GACGGGGAAA CGTTCCTATT TCCAATGAGG 301 TATCGATGCG GGGAGTCACA GTAGGCGCAT GTTGTACCTC CGGAGCCTGA GGTGCTAGTG 361 CAGAAAACAC TGGAGGTGCT TGGCCTTGAT CAGATAACCC GCTAAGGTAA GCAAGAACCT 421 GATTGATCAT CTCTTGGGTA GGTTGGGGTG GCAATTCCTC ATTCTGCACT TGTTCATTCT 481 CCCCATCCTC ACCCTCTCTT ACCACTTCCT CAGTTGGTGG AGGTGTCACC GCCTTAGTAC 541 CAGATGGGCT AGGT Predicted gene structure (within gDNA segment 5706 to 3466): Exon 1 5096 4556 ( 541 n); cDNA 1 541 ( 541 n); score: 0.891 MATCH C08HBa0294K15.1- SGN-E329287- 0.891 541 0.977 C PGS_C08HBa0294K15.1-_SGN-E329287- (5096 4556) Alignment (genomic DNA sequence = upper lines): AGAATGATGC CCAAGTCATA GGTGGTGACT GTGCTGGTTG ACACTCAACA TATGACCGCC 5037 |||||||||| |||||||||| |||||| || || |||||| |||||||||| | |||||||| AGAATGATGC CCAAGTCATA CGTGGTGCCT CTGTTGGTTG ACACTCAACA TGTGACCGCC 60 ACCACATTTT GGCGTTCCCC TAAAACTGAT AGGTCACAAA CTCAACGCCA AATCGTTCCA 4977 |||||||||| ||||||||| | |||||||| | |||||||| |||||| ||| || ||||| | ACCACATTTT GGCGTTCCCT TGAAACTGAT AAGTCACAAA CTCAACACCA AACCGTTCTA 120 CTATGCGCAT CTTATGTAGC AACTCATGAC AATCAACCAG AAAGTCATAG GCATCCTCAG 4917 |||| | ||| ||| ||||| | |||||||| | |||||||| ||| || ||| |||||||||| CTATACCCAT CTTGTGTAGT AGCTCATGAC AGTCAACCAG AAAATCGTAG GCATCCTCAG 180 ATTCAGCACC CTTGAAAACT GGAGGTTTCA ACTTCAAGAA CTTACTGAAA AGTTCGTGCT 4857 ||||| |||| |||| | ||| ||||||||| | |||||||| |||||| ||| ||||| |||| ATTCAACACC CTTGTAGACT TGAGGTTTCA ATTTCAAGAA CTTACTAAAA AGTTCATGCT 240 GGTCACTTGT CATTATAGGC CCTGTAGTCA ACCGAGGAAA CGTGCCTATT TCCAATGAGG 4797 | ||| |||| |||||||||| |||||||||| || ||||| ||| |||||| |||||||||| GATCATTTGT CATTATAGGC CCTGTAGTCA GACGGGGAAA CGTTCCTATT TCCAATGAGG 300 CATCCATGCG GGGAGCCACA GCAGCTGTAT GTTGTACTCC CGGAACCTGA GGTACTGGTG 4737 ||| ||||| ||||| |||| | || | || ||||||| | |||| ||||| ||| || ||| TATCGATGCG GGGAGTCACA GTAGGCGCAT GTTGTACCTC CGGAGCCTGA GGTGCTAGTG 360 CAGAAAACAC TGGAGGTGTC TGGCCTTGAT CAGATAACCC GCTAAGATAA GCAAGAACCT 4677 |||||||||| |||||||| |||||||||| |||||||||| |||||| ||| |||||||||| CAGAAAACAC TGGAGGTGCT TGGCCTTGAT CAGATAACCC GCTAAGGTAA GCAAGAACCT 420 GATTAATCAT CTCTAGGGTA GGTTGGGGTG GTAATTCCTC GTTCTGCACT TGTTCATTTC 4617 |||| ||||| |||| ||||| |||||||||| | |||||||| ||||||||| |||||||| GATTGATCAT CTCTTGGGTA GGTTGGGGTG GCAATTCCTC ATTCTGCACT TGTTCATTCT 480 CCCCTTCCTC ACCCTCTCTT AATACTTCCT CAGTCGGTGG AGGAGTCACC GCCCTAGTAC 4557 |||| ||||| |||||||||| | ||||||| |||| ||||| ||| |||||| ||| |||||| CCCCATCCTC ACCCTCTCTT ACCACTTCCT CAGTTGGTGG AGGTGTCACC GCCTTAGTAC 540 C 4556 | C 541 hqPGS_C08HBa0294K15.1-_SGN-E329287- (5096 4556) ******************************************************************************** EST sequence 82 +strand 716 n (File: SGN-E577713+) 1 CGGTGGATAC CTAGGCACCC AGAGACGAGG AAGGGCGTAG TAATCGACGA AATGCTTCGG 61 GGAGTTGAAA ATAAGCATAG ATCCGGAGAT TCCCGAATAG GGCAACCTTT CGAACTGCTG 121 CTGAATCCAT GGGCAGGCAA GAGACAACCT GGCGAACTGA AACATCTTAG TAGCCAGAGG 181 AAAAGAAAGC AAATAAGGAA GATACATAAG AAAACGTGGA TCCAGGATCA AACAATACAG 241 AAGCCATGCA ATCACAAACC AGAAGATTAC CTGTGATGAC AACATCAGAT GCCTCCGCTT 301 CACACCGCCC AGGGAAAGCG TAACAATGGG CCCTATCGTT CGTCTGTCCG TTGCCCCTAC 361 CATGTTGTGA TGTAGTGGCC CAAGTTTGCC CATTACCTCT GCCGTTTTGG TGACCACCAT 421 TACCTCGACC ACCACGTCCT CCAGAATAAC GGCCTCTACC ATGACCACCT CTACCTCTAG 481 CTATTGGGGG TCTATAACTT TGTCTGGGAC AATTTTTCCT AATATGTCCA ATCTCCCCAC 541 ATCCATACCA TTCTCTGGAG TCAATCCTAG GCCCCTCGGA GAAGTGTTGA CCGGTCTGAG 601 GTGGTCCCCC AACTACAGTC TGTAGTGAAG ACTCAATTGG TCGGACTGAG TAACTTCCCG 661 AACCCTGTCC TCTAGTGTAA GAACCATTAA ACTCACCTCC CTTTCGAAGC CTTTTT Predicted gene structure (within gDNA segment 8696 to 2694): Exon 1 6041 6012 ( 30 n); cDNA 156 185 ( 30 n); score: 0.633 Intron 1 6011 5977 ( 35 n); Pd: 0.945 (s: 0), Pa: 0.000 (s: 0.90) Exon 2 5976 5587 ( 390 n); cDNA 186 575 ( 390 n); score: 0.854 Intron 2 5586 5551 ( 36 n); Pd: 0.000 (s: 0.78), Pa: 0.000 (s: 0.86) Exon 3 5550 5411 ( 140 n); cDNA 576 715 ( 140 n); score: 0.807 MATCH C08HBa0294K15.1- SGN-E577713+ 0.842 560 0.782 C PGS_C08HBa0294K15.1-_SGN-E577713+ (6041 6012,5976 5587,5550 5411) Alignment (genomic DNA sequence = upper lines): ACTCACCCAC CGGAGTAGAA ACACGAATAG GTATGTCAAG CAATTCATAA TGTAAATTAA 5982 ||| | || | ||||| | | ||| || ACTGAAACAT CTTAGTAGCC AGAGGAAAAG .......... .......... .......... 185 GACCAGTAGC AAATGAGGAA GATACATATG AAAATGTGGA TCCAGGATCA AACAATACAG 5922 ||| |||| ||||| |||||||| | |||| ||||| |||||||||| |||||||||| .....AAAGC AAATAAGGAA GATACATAAG AAAACGTGGA TCCAGGATCA AACAATACAG 240 AAGCCATGCA ATCACAAACC AAAAGATTAC CTGTGATGAC GGCATCAGAT GTCTCCGCTT 5862 |||||||||| |||||||||| | |||||||| |||||||||| |||||||| | |||||||| AAGCCATGCA ATCACAAACC AGAAGATTAC CTGTGATGAC AACATCAGAT GCCTCCGCTT 300 CAGACCTCCC AGGGAAAGCA TAACAATGGG CCCTATCACC GGTCTGCCCG TTGCCCCTAC 5802 || ||| ||| ||||||||| |||||||||| ||||||| ||||| ||| |||||||||| CACACCGCCC AGGGAAAGCG TAACAATGGG CCCTATCGTT CGTCTGTCCG TTGCCCCTAC 360 AATGTTGAGC TACAGAAGTT CCAGTTTGCC TGTCACCCCG GCCGTTTTGG TGACCACCAT 5742 |||||| | | || | | |||||||| | ||| | |||||||||| |||||||||| CATGTTGTGA TGTAGTGGCC CAAGTTTGCC CATTACCTCT GCCGTTTTGG TGACCACCAT 420 TACCTCGGCC ACCACGTCCT CCAGAATAGC GACCTCTCCC ATGACCACCT CTACCTCTGA 5682 ||||||| || |||||||||| |||||||| | | ||||| || |||||||||| |||||||| TACCTCGACC ACCACGTCCT CCAGAATAAC GGCCTCTACC ATGACCACCT CTACCTCTAG 480 CTATTGGGGG TCTGTAACTC TGTTTTGGAC AATACCTCTT AATATGTCCA GTCTCTCCAC 5622 |||||||||| ||| ||||| ||| | |||| ||| || | |||||||||| |||| |||| CTATTGGGGG TCTATAACTT TGTCTGGGAC AATTTTTCCT AATATGTCCA ATCTCCCCAC 540 ATCCATAACA CTCTCTTGAT TAAAGCATAG GTCTCTATGA GAACGACAGA GTCTGGGGAT 5562 ||||||| || ||||| || | || | ||| | | | ATCCATACCA TTCTCTGGAG TCAATCCTAG GCCCC..... .......... .......... 575 AACCTCCAAA CTCAGAGAAA TGTTGACCGG TCTGCGGTGG ACCCCCAGCT ACAGCTTGTA 5502 || ||||| |||||||||| |||| ||||| |||||| || |||| |||| .......... .TCGGAGAAG TGTTGACCGG TCTGAGGTGG TCCCCCAACT ACAGTCTGTA 624 GTGAAGACTG AATAGGTCGG GCTGGATAAC CTCCTGAACT CTGCCCTCTG GATTAAAAAC 5442 ||||||||| ||| |||||| ||| |||| ||| |||| ||| ||||| | ||| ||| GTGAAGACTC AATTGGTCGG ACTGAGTAAC TTCCCGAACC CTGTCCTCTA GTGTAAGAAC 684 CATTAAAATC ACCTCCTTTA TGAAACTTCT T 5411 ||||||| || |||||| || ||| | | | | CATTAAACTC ACCTCCCTTT CGAAGCCTTT T 715 hqPGS_C08HBa0294K15.1-_SGN-E577713+ (6041 6012,5976 5587,5550 5411) ******************************************************************************** EST sequence 119 +strand 559 n (File: SGN-E244046+) 1 AAACACGAAT AGGCATATCA AGTAATTCAC AATGTAAAGT TAGACCATTA GCAAATGAGG 61 AAGATACATA AGAAAATGTG GATCCAGGAT CAAACAATAC AGAAGCCATG CAATCACAAA 121 CCAAAAGATT ACCTGTGATG ACAACATCAG ATTCCTCCGC TTCAGACCGC CCAGGGAAAG 181 CGTAACAATG GGCCCTATCA TTCTTATGTC TGTTGCCCCT ACCATGTTGT GATGTAGTGG 241 CTCCAGTTTG CCCATCACCT CGGCCGTTTT GGTGACCACC ATTTCCTCGA CCGCCACGTC 301 CTCCAGAATA ACGGACTCTG CCATGACCAC CTCTACCTCT AACCTTTGGA GGTCTGTAAC 361 TCTGTTTTGG ACAATATCTC TTAATATGTC CAATCTCCCC ACACCCATAG CACTCTCTGG 421 GTTCATGCAT AAGTCTCTCA GAGAAGTGTT GACCGGTCGA AGGTGGACCC CCAACTACAG 481 TCTGTAGTGA AGACTGAATT GGTCGGACTG AGTAACTTCC CGAACCCTGT CCTCTAGTGT 541 AAGCACCATT AAACTCACC Predicted gene structure (within gDNA segment 7055 to 3208): Exon 1 6023 5587 ( 437 n); cDNA 1 437 ( 437 n); score: 0.879 Intron 1 5586 5551 ( 36 n); Pd: 0.000 (s: 0.82), Pa: 0.000 (s: 0.86) Exon 2 5550 5429 ( 122 n); cDNA 438 559 ( 122 n); score: 0.828 MATCH C08HBa0294K15.1- SGN-E244046+ 0.868 559 1.000 C PGS_C08HBa0294K15.1-_SGN-E244046+ (6023 5587,5550 5429) Alignment (genomic DNA sequence = upper lines): AAACACGAAT AGGTATGTCA AGCAATTCAT AATGTAAATT AAGACCAGTA GCAAATGAGG 5964 |||||||||| ||| || ||| || |||||| |||||||| | |||||| || |||||||||| AAACACGAAT AGGCATATCA AGTAATTCAC AATGTAAAGT TAGACCATTA GCAAATGAGG 60 AAGATACATA TGAAAATGTG GATCCAGGAT CAAACAATAC AGAAGCCATG CAATCACAAA 5904 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGATACATA AGAAAATGTG GATCCAGGAT CAAACAATAC AGAAGCCATG CAATCACAAA 120 CCAAAAGATT ACCTGTGATG ACGGCATCAG ATGTCTCCGC TTCAGACCTC CCAGGGAAAG 5844 |||||||||| |||||||||| || |||||| || |||||| |||||||| | |||||||||| CCAAAAGATT ACCTGTGATG ACAACATCAG ATTCCTCCGC TTCAGACCGC CCAGGGAAAG 180 CATAACAATG GGCCCTATCA CCGGTCTGCC CGTTGCCCCT ACAATGTTGA GCTACAGAAG 5784 | |||||||| |||||||||| | || | ||||||||| || |||||| | | || | CGTAACAATG GGCCCTATCA TTCTTATGTC TGTTGCCCCT ACCATGTTGT GATGTAGTGG 240 TTCCAGTTTG CCTGTCACCC CGGCCGTTTT GGTGACCACC ATTACCTCGG CCACCACGTC 5724 ||||||||| || ||||| |||||||||| |||||||||| ||| ||||| || ||||||| CTCCAGTTTG CCCATCACCT CGGCCGTTTT GGTGACCACC ATTTCCTCGA CCGCCACGTC 300 CTCCAGAATA GCGACCTCTC CCATGACCAC CTCTACCTCT GACTATTGGG GGTCTGTAAC 5664 |||||||||| || |||| |||||||||| |||||||||| || |||| |||||||||| CTCCAGAATA ACGGACTCTG CCATGACCAC CTCTACCTCT AACCTTTGGA GGTCTGTAAC 360 TCTGTTTTGG ACAATACCTC TTAATATGTC CAGTCTCTCC ACATCCATAA CACTCTCTTG 5604 |||||||||| |||||| ||| |||||||||| || |||| || ||| ||||| |||||||| | TCTGTTTTGG ACAATATCTC TTAATATGTC CAATCTCCCC ACACCCATAG CACTCTCTGG 420 ATTAAAGCAT AGGTCTCTAT GAGAACGACA GAGTCTGGGG ATAACCTCCA AACTCAGAGA 5544 || | |||| | ||||| ||||||| GTTCATGCAT AAGTCTC... .......... .......... .......... ...TCAGAGA 444 AATGTTGACC GGTCTGCGGT GGACCCCCAG CTACAGCTTG TAGTGAAGAC TGAATAGGTC 5484 | |||||||| |||| ||| ||||||||| |||||| || |||||||||| ||||| |||| AGTGTTGACC GGTCGAAGGT GGACCCCCAA CTACAGTCTG TAGTGAAGAC TGAATTGGTC 504 GGGCTGGATA ACCTCCTGAA CTCTGCCCTC TGGATTAAAA ACCATTAAAA TCACC 5429 || ||| || || ||| ||| | ||| |||| | | ||| ||||||||| ||||| GGACTGAGTA ACTTCCCGAA CCCTGTCCTC TAGTGTAAGC ACCATTAAAC TCACC 559 hqPGS_C08HBa0294K15.1-_SGN-E244046+ (6023 5587,5550 5429) ******************************************************************************** EST sequence 142 +strand 720 n (File: SGN-E356614+) 1 GCGAATCCGC TCTTGAGGAC TGAAACAGAG TTGAGTGGCA TATCTGGATA GTGCACGAAA 61 CTTAGCCTCA TAAGCATTAA CTGACACCCT ACCTTGCTCT AGGCTCAAGA ACTCATCCCT 121 TTTCTTATCC CTCAAAGTCC GGGGGATATA CTTCTCCATA AACAAACTAT AGAATGAGGC 181 CCAAGTCATA GGTGATGCCT CTATTGGTTG ACACTCGATA TGTGACCGCC ACCACATTTG 241 GGCGTTCCCT TGAAACTGAT AAGTCACAAA CTCCACACCA AACCGTTCTA CTATACCCAT 301 CTTGTGTAGT AGCTCGTGAC AGTCAACCAG AAAATCATAA GCATCCTCCG ATTCAGCACC 361 CTTGAAGACC GGAGGTTTCA ATTTCAAGAA CTTACTGAAA AGTTCATGCT GATCATTTGT 421 CATTATAGGG ACAGTAGTCA AACGTGGAAA TGTGCCTATG TCCAATGGAA CATCCATGCG 481 GGGAGCCATA GTAGCCGCAT GTTGTACTTC TGAAACCGGA GGTGTTGGCG CAGAAAACAC 541 TGGAGGTGCT TGACCTTGAT CAGATAACCC GCTAAGATAA GCCAGAACCT GATTGATCAT 601 CTCTGGGGTA GGTTGGGGTG GCATTTCCTC ATTTTGCACT TGNTCAGTTT CCCCATCCCT 661 CCCTTTCTCT ATTACTTCCT CAGTCAGTGG AAGAGTCACT GCCCTAGTAT CAGATGGGCT Predicted gene structure (within gDNA segment 9007 to 2695): Exon 1 5265 4558 ( 708 n); cDNA 2 709 ( 708 n); score: 0.858 MATCH C08HBa0294K15.1- SGN-E356614+ 0.858 708 0.983 C PGS_C08HBa0294K15.1-_SGN-E356614+ (5265 4558) Alignment (genomic DNA sequence = upper lines): CGAATCCGCT CTTGTGGACT GAAGCAAAGC TGGGTGGCAT ACCTGGATAG TGCACAAAAC 5206 |||||||||| |||| ||||| ||| || || || ||||||| | |||||||| ||||| |||| CGAATCCGCT CTTGAGGACT GAAACAGAGT TGAGTGGCAT ATCTGGATAG TGCACGAAAC 61 TTAGCCTCAT AAGCAGTAAC CGACATCCTG CCTTGCTCTA AGCTCAGGAA CTTATCTCTC 5146 |||||||||| ||||| |||| |||| ||| |||||||||| ||||| ||| || ||| || TTAGCCTCAT AAGCATTAAC TGACACCCTA CCTTGCTCTA GGCTCAAGAA CTCATCCCTT 121 CTCCTATCCC TCAAAGTCCG AGGTATATAA TTCTCCATAA ACAAGCTAGA GAATGATGCC 5086 || |||||| |||||||||| || ||||| |||||||||| |||| ||| | |||||| ||| TTCTTATCCC TCAAAGTCCG GGGGATATAC TTCTCCATAA ACAAACTATA GAATGAGGCC 181 CAAGTCATAG GTGGTGACTG TGCTGGTTGA CACTCAACAT ATGACCGCCA CCACATTTTG 5026 |||||||||| ||| || || | ||||||| ||||| | || ||||||||| |||||||| | CAAGTCATAG GTGATGCCTC TATTGGTTGA CACTCGATAT GTGACCGCCA CCACATTTGG 241 GCGTTCCCCT AAAACTGATA GGTCACAAAC TCAACGCCAA ATCGTTCCAC TATGCGCATC 4966 |||||||| | ||||||||| ||||||||| || || |||| | ||||| || ||| | |||| GCGTTCCCTT GAAACTGATA AGTCACAAAC TCCACACCAA ACCGTTCTAC TATACCCATC 301 TTATGTAGCA ACTCATGACA ATCAACCAGA AAGTCATAGG CATCCTCAGA TTCAGCACCC 4906 || ||||| | ||| ||||| ||||||||| || ||||| | ||||||| || |||||||||| TTGTGTAGTA GCTCGTGACA GTCAACCAGA AAATCATAAG CATCCTCCGA TTCAGCACCC 361 TTGAAAACTG GAGGTTTCAA CTTCAAGAAC TTACTGAAAA GTTCGTGCTG GTCACTTGTC 4846 ||||| || | |||||||||| ||||||||| |||||||||| |||| ||||| ||| ||||| TTGAAGACCG GAGGTTTCAA TTTCAAGAAC TTACTGAAAA GTTCATGCTG ATCATTTGTC 421 ATTATAGGCC CTGTAGTCAA CCGAGGAAAC GTGCCTATTT CCAATGAGGC ATCCATGCGG 4786 |||||||| | |||||||| || ||||| |||||||| | |||||| | |||||||||| ATTATAGGGA CAGTAGTCAA ACGTGGAAAT GTGCCTATGT CCAATGGAAC ATCCATGCGG 481 GGAGCCACAG CAGCTGTATG TTGTACTCCC GGAACCTGAG GTACTGGTGC AGAAAACACT 4726 ||||||| || ||| | ||| ||||||| | | |||| ||| || ||| || |||||||||| GGAGCCATAG TAGCCGCATG TTGTACTTCT GAAACCGGAG GTGTTGGCGC AGAAAACACT 541 GGAGGTGTCT GGCCTTGATC AGATAACCCG CTAAGATAAG CAAGAACCTG ATTAATCATC 4666 ||||||| | | |||||||| |||||||||| |||||||||| | |||||||| ||| |||||| GGAGGTGCTT GACCTTGATC AGATAACCCG CTAAGATAAG CCAGAACCTG ATTGATCATC 601 TCTAGGGTAG GTTGGGGTGG TAATTCCTCG TTCTGCACTT GTTCA-TTTC CCCCTTCCTC 4607 ||| |||||| |||||||||| | |||||| || ||||||| | ||| |||| ||| | |||| TCTGGGGTAG GTTGGGGTGG CATTTCCTCA TTTTGCACTT GNTCAGTTTC CCCATCCCTC 661 ACCCTCTCTT AATACTTCCT CAGTCGGTGG AGGAGTCACC GCCCTAGTA 4558 | |||| | | |||||||| ||||| |||| | ||||||| ||||||||| CCTTTCTC-T ATTACTTCCT CAGTCAGTGG AAGAGTCACT GCCCTAGTA 709 hqPGS_C08HBa0294K15.1-_SGN-E356614+ (5265 4558) ******************************************************************************** EST sequence 90 +strand 664 n (File: SGN-E352401+) 1 AATCCGCTCT TGAGGACTGA AACAGAGTTG AGTGGCATAT CTGGATAGTG CACGAAACTT 61 AGCCTCATAA GCATTAACTG ACACCCTACC TTGCTCTAGG CTCAAGAACT CATCCCTTTT 121 CTTATCCCTC AAAGTCCGGG GGATATACTT CTCCATAAAC AAACTATAGA ATGAGGCCCA 181 AGTCATAGGT GATGCCTCTA TTGGTTGACA CTCGATATGT GACCGCCACC ACATTTGGGC 241 GTTCCCTTGA AACTGATAAG TCACAAACTC CACACCAAAC CGTTCTACTA TACCCATCTT 301 GTGTAGTAGC TCGTGACAGT CAACCAGAAA ATCATAAGCA TCCTCCGATT CAGCACCCTT 361 GAAGACCGGA GGTTTCAATT TCAAGAACTT ACTGAAAAGT TCATGCTGAT CATTTGTCAT 421 TATAGGGACA GTAGTCAAAC GTGGAAATGT GCCTATGTCC AATGGAACAT CCATGCGGGG 481 AGCCATAGTA GCCGCATGTT GTACTTCTGA AACCGGAGGT GTTGGCGCAG AAAACACTGG 541 AGGTGCTTGA CCTTGATCAG ATAACCCGCT AAGATAAGCC AGAACCTGAT TGATCATCTC 601 TGGGGTAGGT TGGGGTGCCA TTTCCCTCAT TTGCACTTGT TCAGTTTCCC CATCCTCCCC 661 TTCT Predicted gene structure (within gDNA segment 8977 to 3225): Exon 1 5263 4600 ( 664 n); cDNA 1 664 ( 664 n); score: 0.855 MATCH C08HBa0294K15.1- SGN-E352401+ 0.855 664 1.000 C PGS_C08HBa0294K15.1-_SGN-E352401+ (5263 4600) Alignment (genomic DNA sequence = upper lines): AATCCGCTCT TGTGGACTGA AGCAAAGCTG GGTGGCATAC CTGGATAGTG CACAAAACTT 5204 |||||||||| || ||||||| | || || || |||||||| |||||||||| ||| |||||| AATCCGCTCT TGAGGACTGA AACAGAGTTG AGTGGCATAT CTGGATAGTG CACGAAACTT 60 AGCCTCATAA GCAGTAACCG ACATCCTGCC TTGCTCTAAG CTCAGGAACT TATCTCTCCT 5144 |||||||||| ||| |||| | ||| ||| || |||||||| | |||| ||||| ||| || | AGCCTCATAA GCATTAACTG ACACCCTACC TTGCTCTAGG CTCAAGAACT CATCCCTTTT 120 CCTATCCCTC AAAGTCCGAG GTATATAATT CTCCATAAAC AAGCTAGAGA ATGATGCCCA 5084 | |||||||| |||||||| | | ||||| || |||||||||| || ||| ||| |||| ||||| CTTATCCCTC AAAGTCCGGG GGATATACTT CTCCATAAAC AAACTATAGA ATGAGGCCCA 180 AGTCATAGGT GGTGACTGTG CTGGTTGACA CTCAACATAT GACCGCCACC ACATTTTGGC 5024 |||||||||| | || || | ||||||||| ||| | || | |||||||||| |||||| ||| AGTCATAGGT GATGCCTCTA TTGGTTGACA CTCGATATGT GACCGCCACC ACATTTGGGC 240 GTTCCCCTAA AACTGATAGG TCACAAACTC AACGCCAAAT CGTTCCACTA TGCGCATCTT 4964 |||||| | | |||||||| | |||||||||| || ||||| ||||| |||| | | |||||| GTTCCCTTGA AACTGATAAG TCACAAACTC CACACCAAAC CGTTCTACTA TACCCATCTT 300 ATGTAGCAAC TCATGACAAT CAACCAGAAA GTCATAGGCA TCCTCAGATT CAGCACCCTT 4904 ||||| | | || ||||| | |||||||||| ||||| ||| ||||| |||| |||||||||| GTGTAGTAGC TCGTGACAGT CAACCAGAAA ATCATAAGCA TCCTCCGATT CAGCACCCTT 360 GAAAACTGGA GGTTTCAACT TCAAGAACTT ACTGAAAAGT TCGTGCTGGT CACTTGTCAT 4844 ||| || ||| |||||||| | |||||||||| |||||||||| || ||||| | || ||||||| GAAGACCGGA GGTTTCAATT TCAAGAACTT ACTGAAAAGT TCATGCTGAT CATTTGTCAT 420 TATAGGCCCT GTAGTCAACC GAGGAAACGT GCCTATTTCC AATGAGGCAT CCATGCGGGG 4784 |||||| | |||||||| | | ||||| || |||||| ||| |||| ||| |||||||||| TATAGGGACA GTAGTCAAAC GTGGAAATGT GCCTATGTCC AATGGAACAT CCATGCGGGG 480 AGCCACAGCA GCTGTATGTT GTACTCCCGG AACCTGAGGT ACTGGTGCAG AAAACACTGG 4724 ||||| || | || | ||||| ||||| | | |||| ||||| ||| |||| |||||||||| AGCCATAGTA GCCGCATGTT GTACTTCTGA AACCGGAGGT GTTGGCGCAG AAAACACTGG 540 AGGTGTCTGG CCTTGATCAG ATAACCCGCT AAGATAAGCA AGAACCTGAT TAATCATCTC 4664 ||||| || |||||||||| |||||||||| ||||||||| |||||||||| | |||||||| AGGTGCTTGA CCTTGATCAG ATAACCCGCT AAGATAAGCC AGAACCTGAT TGATCATCTC 600 TAGGGTAGGT TGGGGTGGTA ATTCCTCGTT CTGCACTTGT TCATTTCCCC CTTCCTCACC 4604 | |||||||| ||||||| | |||| | ||||||||| ||| || ||| | ||||| || TGGGGTAGGT TGGGGTGCCA TTTCCCTCAT TTGCACTTGT TCAGTTTCCC CATCCTCCCC 660 CTCT 4600 ||| TTCT 664 hqPGS_C08HBa0294K15.1-_SGN-E352401+ (5263 4600) ******************************************************************************** EST sequence 135 +strand 543 n (File: SGN-E355026+) 1 GAACACATCC AAAAATTCTC AAACTACCAA AACTAATTCA ATTGAGGGTA CTTGGATAGT 61 GTCATCCTTG AGATGTGCCA AGAAGGATAG ACAACCCTTA CTAACCATCT TCTGAGCACA 121 AAGAAAGGAG ATAATACGCA CCGGATTGGA AGTGTAGTCA CCCTCCCACA CTAACGGATC 181 TGTCCCAGGC TTGGCTAACG TCACCGTTTT AGCATTACAA TCCAAGATCG CAAAATTGGG 241 AGAAAGCCAA GTCATACCCA GAATTACATC AAAGTCACCC ATTTCTAAAG TAACCAAATC 301 TAGATAAGTG TTGCTCCCCA CGAAATTCAC CAAACAAGAC CTATGTACCT TTTCAACTAT 361 CACAGACTCA CCCACCGGAG TAGAAACACG AATAGGCATG TCAAGTAATT CACAATGCAA 421 TTTTAGACCA TTAGCAAATG ATGAAGATAC ATATGAAAAC GTGGAGCCAG GGTCAAATAA 481 TACAGATGCC ATGCAATCAC AAACCAAGAG ATTACCTGTG ATAACAGCAT CAGACGCCTC 541 TGC Predicted gene structure (within gDNA segment 7816 to 3931): Exon 1 6405 5864 ( 542 n); cDNA 2 543 ( 542 n); score: 0.867 MATCH C08HBa0294K15.1- SGN-E355026+ 0.867 542 0.998 C PGS_C08HBa0294K15.1-_SGN-E355026+ (6405 5864) Alignment (genomic DNA sequence = upper lines): AACACATCTA GAAACTCACG GACTATCGAA ATCGACTCAA TTGAAGGTAC TTGGGTAGTA 6346 |||||||| | ||| || | |||| | || | | |||| |||| ||||| |||| |||| AACACATCCA AAAATTCTCA AACTACCAAA ACTAATTCAA TTGAGGGTAC TTGGATAGTG 61 TCATCCTAGA GGTGTGTCAA GAAAGCTAAA CAACCCTTAC TAACCATTCT CTTAGCACGA 6286 ||||||| || | |||| ||| ||| | || | |||||||||| ||||||| | || ||||| | TCATCCTTGA GATGTGCCAA GAAGGATAGA CAACCCTTAC TAACCATCTT CTGAGCACAA 121 AGAAAGGAGA TAATACGAAA TGGAGTGGAA GTGTAGTCAC CCTCCCACAC TAACGGATCT 6226 |||||||||| ||||||| | ||| ||||| |||||||||| |||||||||| |||||||||| AGAAAGGAGA TAATACGCAC CGGATTGGAA GTGTAGTCAC CCTCCCACAC TAACGGATCT 181 GTCCCAGGCT TGGCCGACGT TACAGTTTTA GCATTACAAT CTAAGATTGC AAAATTTGGA 6166 |||||||||| |||| |||| || |||||| |||||||||| | ||||| || |||||| ||| GTCCCAGGCT TGGCTAACGT CACCGTTTTA GCATTACAAT CCAAGATCGC AAAATTGGGA 241 GACAGCCAAG TCATACCCAG AATTACATCG AAGTCAACCA TTTCTAAGAT AACCAAGTCT 6106 || ||||||| |||||||||| ||||||||| |||||| ||| ||||||| | |||||| ||| GAAAGCCAAG TCATACCCAG AATTACATCA AAGTCACCCA TTTCTAAAGT AACCAAATCT 301 ACATGAGTAT TGTTCCCCAC AAAAGTCACA AGACAAGACC TATACACTTT TTCAACTATC 6046 | || ||| | || ||||||| ||| |||| | |||||||| ||| || || |||||||||| AGATAAGTGT TGCTCCCCAC GAAATTCACC AAACAAGACC TATGTACCTT TTCAACTATC 361 ACAGACTCAC CCACCGGAGT AGAAACACGA ATAGGTATGT CAAGCAATTC ATAATGTAAA 5986 |||||||||| |||||||||| |||||||||| ||||| |||| |||| ||||| | |||| || ACAGACTCAC CCACCGGAGT AGAAACACGA ATAGGCATGT CAAGTAATTC ACAATGCAAT 421 TTAAGACCAG TAGCAAATGA GGAAGATACA TATGAAAATG TGGATCCAGG ATCAAACAAT 5926 || |||||| |||||||||| ||||||||| |||||||| | |||| ||||| ||||| ||| TTTAGACCAT TAGCAAATGA TGAAGATACA TATGAAAACG TGGAGCCAGG GTCAAATAAT 481 ACAGAAGCCA TGCAATCACA AACCAAAAGA TTACCTGTGA TGACGGCATC AGATGTCTCC 5866 ||||| |||| |||||||||| |||||| ||| |||||||||| | || ||||| ||| | ||| ACAGATGCCA TGCAATCACA AACCAAGAGA TTACCTGTGA TAACAGCATC AGACGCCTCT 541 GC 5864 || GC 543 hqPGS_C08HBa0294K15.1-_SGN-E355026+ (6405 5864) ******************************************************************************** EST sequence 133 +strand 761 n (File: SGN-E355244+) 1 CGGAAACTCC CATCCTTCTT CTTCACAAAC AAAATCGGAG CACCCCAAGG AGATGCACTT 61 GGTCTAATGA AACCTTTGCT CAACAACTCT TGAAGTTGGG CCTTTAACTC TCTTAACTCT 121 ACGGGAGCCA TTCTATAAGG GGGTATAGAA ATGGGGCGTG TGCCCGGTTC AAGATCGATA 181 CAGAAGTCAA TATCCCTATC TGGTGGCATA CCAGGAAGAT CTGCAGGGAA CACATCCAAA 241 AACTCACAGA CTATAAAAAC CGACTCAATC GAAGGTACTT GGGTAGTGTC ATCCTTGAGA 301 TGTGCCAAGA AAGCTAAACA CCCTTTACTA ACCATTTTCT TAGCACGAAG AAAGGAGATG 361 ATGCACACCG GATTGGAAGT GTAGTCACCC TCCCACACTA ACGGATCTGT CCCAGGCTTG 421 GCTAATGTCA CCGTTTTAGC ATTACAATCC AAGATCGCAA ATTGCGGAGA AAGCCAAGTC 481 ATACCCAGAA TTACATCAAA ATCAACCATT TCTAAGATAA CCAAATCTAC ATAAGTGTTG 541 CTCCCCACAA AGTTCACCAA ACAAGACCTA TATACCTTTT CAACTACCAC AGACTCACCC 601 ACCGGAGTAG AAACACGAAT AGGCATATCA AGTAATTCAC AATGTAAATT TAGACCGTTA 661 GCAAATGAGG AAGATACANT AGAAAACGTG GATCCCAGGA TCAACAATAC AGAAGCCATG 721 CAATCACAAT CGAAAGATTA CCTGTGATGA CAGCATCTAA T Predicted gene structure (within gDNA segment 7692 to 4021): Exon 1 6633 5872 ( 762 n); cDNA 1 761 ( 761 n); score: 0.880 MATCH C08HBa0294K15.1- SGN-E355244+ 0.880 762 1.001 C PGS_C08HBa0294K15.1-_SGN-E355244+ (6633 5872) Alignment (genomic DNA sequence = upper lines): CGAAAACTTC CATCCTTCTT CTTCACAAAT AAAATAGGAG CACCCCAAGG GGATGCACTT 6574 || ||||| | |||||||||| ||||||||| ||||| |||| |||||||||| ||||||||| CGGAAACTCC CATCCTTCTT CTTCACAAAC AAAATCGGAG CACCCCAAGG AGATGCACTT 60 GGTCTAATAA AGCCTTTGCT TAACAACTCT TGAAGTTGGG CCTTTAACTC TCTTAACTCA 6514 |||||||| | | |||||||| ||||||||| |||||||||| |||||||||| ||||||||| GGTCTAATGA AACCTTTGCT CAACAACTCT TGAAGTTGGG CCTTTAACTC TCTTAACTCT 120 GCGGGAGCCA TCCTATAATG GGGTATGGAA ATGGGGCGAG TACCCGGCTC CAGATCAATA 6454 ||||||||| | |||||| | |||||| ||| |||||||| | | ||||| || ||||| ||| ACGGGAGCCA TTCTATAAGG GGGTATAGAA ATGGGGCGTG TGCCCGGTTC AAGATCGATA 180 CAGAAATAAA TATCTCTATT CGGTGGCATA CGAGGAAGGT CTGCAGGAAA CACATCTAGA 6394 ||||| | || |||| |||| ||||||||| | |||||| | ||||||| || |||||| | | CAGAAGTCAA TATCCCTATC TGGTGGCATA CCAGGAAGAT CTGCAGGGAA CACATCCAAA 240 AACTCACGGA CTATCGAAAT CGACTCAATT GAAGGTACTT GGGTAGTATC ATCCTAGAGG 6334 ||||||| || |||| ||| ||||||||| |||||||||| ||||||| || ||||| ||| AACTCACAGA CTATAAAAAC CGACTCAATC GAAGGTACTT GGGTAGTGTC ATCCTTGAGA 300 TGTGTCAAGA AAGCTAAACA ACCCTTACTA ACCATTCTCT TAGCACGAAG AAAGGAGATA 6274 |||| ||||| |||||||||| || |||||| |||||| ||| |||||||||| ||||||||| TGTGCCAAGA AAGCTAAACA CCCTTTACTA ACCATTTTCT TAGCACGAAG AAAGGAGATG 360 ATACGAAATG GAGTGGAAGT GTAGTCACCC TCCCACACTA ACGGATCTGT CCCAGGCTTG 6214 || | | | || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGCACACCG GATTGGAAGT GTAGTCACCC TCCCACACTA ACGGATCTGT CCCAGGCTTG 420 GCCGACGTTA CAGTTTTAGC ATTACAATCT AAGATTGCAA AATTTGGAGA CAGCCAAGTC 6154 || | || | | |||||||| ||||||||| ||||| |||| | | ||||| ||||||||| GCTAATGTCA CCGTTTTAGC ATTACAATCC AAGATCGCAA ATTGCGGAGA AAGCCAAGTC 480 ATACCCAGAA TTACATCGAA GTCAACCATT TCTAAGATAA CCAAGTCTAC ATGAGTATTG 6094 |||||||||| ||||||| || ||||||||| |||||||||| |||| ||||| || ||| ||| ATACCCAGAA TTACATCAAA ATCAACCATT TCTAAGATAA CCAAATCTAC ATAAGTGTTG 540 TTCCCCACAA AAGTCACAAG ACAAGACCTA TACACTTTTT CAACTATCAC AGACTCACCC 6034 ||||||||| | |||| | |||||||||| || || |||| |||||| ||| |||||||||| CTCCCCACAA AGTTCACCAA ACAAGACCTA TATACCTTTT CAACTACCAC AGACTCACCC 600 ACCGGAGTAG AAACACGAAT AGGTATGTCA AGCAATTCAT AATGTAAATT AAGACCAGTA 5974 |||||||||| |||||||||| ||| || ||| || |||||| |||||||||| ||||| || ACCGGAGTAG AAACACGAAT AGGCATATCA AGTAATTCAC AATGTAAATT TAGACCGTTA 660 GCAAATGAGG AAGATACATA TGAAAATGTG GAT-CCAGGA TCAAACAATA CAGAAGCCAT 5915 |||||||||| |||||||| ||||| ||| ||| |||||| || ||||||| |||||||||| GCAAATGAGG AAGATACANT AGAAAACGTG GATCCCAGGA TC-AACAATA CAGAAGCCAT 719 GCAATCACAA ACCAAAAGAT TACCTGTGAT GACGGCATCA GAT 5872 |||||||| | | | |||||| |||||||||| ||| ||||| || GCAATCAC-A ATCGAAAGAT TACCTGTGAT GACAGCATCT AAT 761 hqPGS_C08HBa0294K15.1-_SGN-E355244+ (6633 5872) ******************************************************************************** EST sequence 106 +strand 331 n (File: SGN-E352716+) 1 GATCTGTCCC AGGCTTGGCT AACGTCACAG TTTTAGCATT ACAATCCAAG ATTGCAAAAT 61 TTGGAGAAAG CCAAGTCATA CCCAGAATTA CATCAAAATC AACCATTTCT AAGATAACCA 121 AGTCTACATA AGTATTGCTC CCCACAAAAG TCACCAGACC AGACCTATAT ACTTTTTCAA 181 CTATCACAGA CTCACCCACC GGAGTAGAAA CACGAATAGG CATGTCAAGC AATTCATAAT 241 TTAATTTAAG ACCAGTAGCA AATGAGGAAG ATACATATGA AAATGTGGAT CCAGGGTCAA 301 ATAATACAAA AGCCATGCAA TCACAAAAAA A Predicted gene structure (within gDNA segment 6830 to 5254): Exon 1 6230 5900 ( 331 n); cDNA 1 331 ( 331 n); score: 0.940 MATCH C08HBa0294K15.1- SGN-E352716+ 0.940 331 1.000 C PGS_C08HBa0294K15.1-_SGN-E352716+ (6230 5900) Alignment (genomic DNA sequence = upper lines): GATCTGTCCC AGGCTTGGCC GACGTTACAG TTTTAGCATT ACAATCTAAG ATTGCAAAAT 6171 |||||||||| ||||||||| |||| |||| |||||||||| |||||| ||| |||||||||| GATCTGTCCC AGGCTTGGCT AACGTCACAG TTTTAGCATT ACAATCCAAG ATTGCAAAAT 60 TTGGAGACAG CCAAGTCATA CCCAGAATTA CATCGAAGTC AACCATTTCT AAGATAACCA 6111 ||||||| || |||||||||| |||||||||| |||| || || |||||||||| |||||||||| TTGGAGAAAG CCAAGTCATA CCCAGAATTA CATCAAAATC AACCATTTCT AAGATAACCA 120 AGTCTACATG AGTATTGTTC CCCACAAAAG TCACAAGACA AGACCTATAC ACTTTTTCAA 6051 ||||||||| ||||||| || |||||||||| |||| |||| ||||||||| |||||||||| AGTCTACATA AGTATTGCTC CCCACAAAAG TCACCAGACC AGACCTATAT ACTTTTTCAA 180 CTATCACAGA CTCACCCACC GGAGTAGAAA CACGAATAGG TATGTCAAGC AATTCATAAT 5991 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| CTATCACAGA CTCACCCACC GGAGTAGAAA CACGAATAGG CATGTCAAGC AATTCATAAT 240 GTAAATTAAG ACCAGTAGCA AATGAGGAAG ATACATATGA AAATGTGGAT CCAGGATCAA 5931 ||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| TTAATTTAAG ACCAGTAGCA AATGAGGAAG ATACATATGA AAATGTGGAT CCAGGGTCAA 300 ACAATACAGA AGCCATGCAA TCACAAACCA A 5900 | |||||| | |||||||||| ||||||| | | ATAATACAAA AGCCATGCAA TCACAAAAAA A 331 hqPGS_C08HBa0294K15.1-_SGN-E352716+ (6230 5900) ******************************************************************************** EST sequence 35 -strand 659 n (File: SGN-E352117-) 1 CCCAAGGGGA TGCACTTGGC NTAATGAAGC CCTTACNTAA CAACTCTTGA AGTTGGGCCT 61 TTAACTCCCC CAACTCAGCG GGAGCCATTC TATAAGGGGG TATGGAAATG GGGTGATCAC 121 CCGGCTCCAG ATCAATGCAA AAGTCAATAT CCCTATCCGG TGGCATACCA GGAAGGTCTG 181 CAGGAAACAC ATCCAGAAAC TCACGGACTA TCGAAACTGA CTCAATTGAA GGTACTTGGG 241 TAGTATCATC CCTGAGGTGT GCCAAGAAAG CTAAACACCC TTTACTAACC ATTCTCTTAG 301 CACAAAGAAA GGAGATGATA CGAACTGGAG TGGAAGTGTA GTCACCCTCC CACACTAACG 361 CATCTATCTC AGGCTTGGCC AACGTTACAG TTTTAGCATT ACAATCCAAG ATTGCAAAAT 421 TTGGAGACAG CCAAGTCATA CCCAGAATTA CATCGAAGTC AACCATTTAT AGGATAACCA 481 AGTCTACATG AGTATTGCTC CCACAAATGT CACAAGACAA GACCTATACA CCTTTTCAAC 541 AATCACAGAC TCACCCACCG GAGTAGAACA CGAATAGGTA TGTCAAGCGA TTCACTATGT 601 AAATTAAGAA CAGTAGCAAA TGAGGAAGAT ACATATGAAA ATGTGGAGGC AGGATCAAA Predicted gene structure (within gDNA segment 7200 to 5222): Exon 1 6590 5930 ( 661 n); cDNA 1 659 ( 659 n); score: 0.923 MATCH C08HBa0294K15.1- SGN-E352117- 0.923 661 1.003 C PGS_C08HBa0294K15.1-_SGN-E352117- (6590 5930) Alignment (genomic DNA sequence = upper lines): CCCAAGGGGA TGCACTTGGT CTAATAAAGC CTTTGCTTAA CAACTCTTGA AGTTGGGCCT 6531 |||||||||| ||||||||| |||| |||| | || | ||| |||||||||| |||||||||| CCCAAGGGGA TGCACTTGGC NTAATGAAGC CCTTACNTAA CAACTCTTGA AGTTGGGCCT 60 TTAACTCTCT TAACTCAGCG GGAGCCATCC TATAATGGGG TATGGAAATG GGGCGAGTAC 6471 ||||||| | ||||||||| |||||||| | ||||| |||| |||||||||| ||| || || TTAACTCCCC CAACTCAGCG GGAGCCATTC TATAAGGGGG TATGGAAATG GGGTGATCAC 120 CCGGCTCCAG ATCAATACAG AAATAAATAT CTCTATTCGG TGGCATACGA GGAAGGTCTG 6411 |||||||||| |||||| || || | ||||| | |||| ||| |||||||| | |||||||||| CCGGCTCCAG ATCAATGCAA AAGTCAATAT CCCTATCCGG TGGCATACCA GGAAGGTCTG 180 CAGGAAACAC ATCTAGAAAC TCACGGACTA TCGAAATCGA CTCAATTGAA GGTACTTGGG 6351 |||||||||| ||| |||||| |||||||||| |||||| || |||||||||| |||||||||| CAGGAAACAC ATCCAGAAAC TCACGGACTA TCGAAACTGA CTCAATTGAA GGTACTTGGG 240 TAGTATCATC CTAGAGGTGT GTCAAGAAAG CTAAACAACC CTTACTAACC ATTCTCTTAG 6291 |||||||||| | ||||||| | |||||||| ||||||| || ||||||||| |||||||||| TAGTATCATC CCTGAGGTGT GCCAAGAAAG CTAAACACCC TTTACTAACC ATTCTCTTAG 300 CACGAAGAAA GGAGATAATA CGAAATGGAG TGGAAGTGTA GTCACCCTCC CACACTAACG 6231 ||| |||||| |||||| ||| |||| ||||| |||||||||| |||||||||| |||||||||| CACAAAGAAA GGAGATGATA CGAACTGGAG TGGAAGTGTA GTCACCCTCC CACACTAACG 360 GATCTGTCCC AGGCTTGGCC GACGTTACAG TTTTAGCATT ACAATCTAAG ATTGCAAAAT 6171 |||| || | |||||||||| ||||||||| |||||||||| |||||| ||| |||||||||| CATCTATCTC AGGCTTGGCC AACGTTACAG TTTTAGCATT ACAATCCAAG ATTGCAAAAT 420 TTGGAGACAG CCAAGTCATA CCCAGAATTA CATCGAAGTC AACCATTTCT AAGATAACCA 6111 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | | |||||||| TTGGAGACAG CCAAGTCATA CCCAGAATTA CATCGAAGTC AACCATTTAT AGGATAACCA 480 AGTCTACATG AGTATTGTTC CCCACAAAAG TCACAAGACA AGACCTATAC ACTTTTTCAA 6051 |||||||||| ||||||| | |||||||| | |||||||||| |||||||||| || ||||||| AGTCTACATG AGTATTGCT- CCCACAAATG TCACAAGACA AGACCTATAC ACCTTTTCAA 539 CTATCACAGA CTCACCCACC GGAGTAGAAA CACGAATAGG TATGTCAAGC AATTCATAAT 5991 | |||||||| |||||||||| ||||||| || |||||||||| |||||||||| ||||| || CAATCACAGA CTCACCCACC GGAGTAG-AA CACGAATAGG TATGTCAAGC GATTCACTAT 598 GTAAATTAAG ACCAGTAGCA AATGAGGAAG ATACATATGA AAATGTGGAT CCAGGATCAA 5931 |||||||||| | |||||||| |||||||||| |||||||||| ||||||||| ||||||||| GTAAATTAAG AACAGTAGCA AATGAGGAAG ATACATATGA AAATGTGGAG GCAGGATCAA 658 A 5930 | A 659 hqPGS_C08HBa0294K15.1-_SGN-E352117- (6590 5930) ******************************************************************************** EST sequence 117 +strand 661 n (File: SGN-E351414+) 1 CGGAAACTCC CATCCTTCTT CTTCACAAAC AAAATCGGAG CACCCCAAGG AGATGCACTT 61 GGTCTAATGA AACCTTTGCT CAACAACTCT TGAAGTTGGG CCTTTAACTC TCTTAACTCT 121 ACGGGAGCCA TTCTATAAGG GGGTATAGAA ATGGGGCGTG TGCCCGGTTC AAGATCGATA 181 CAGAAGTCAA TATCCCTATC TGGTGGCATA CCAGGAAGAT CTGCAGGGAA CACATCCAAA 241 AACTCACAGA CTATAAAAAC CGACTCAATC GAAGGTACTT GGGTAGTGTC ATCCTTGAGA 301 TGTGCCAAGA AAGCTAAACA CCCTTTACTA ACCATTTTCT TAGCACGAAG AAAGGAGATG 361 ATGCACACCG GATTGGAAGT GTAGTCACCC TCCCACACTA ACGGATCTGT CCCAGGCTTG 421 GCTAATGTCA CCGTTTTAGC ATTACAATCC AAGATCGCAA ATTGCGGAGA AAGCCAAGTC 481 ATACCCAGAA TTACATCAAA ATCAACCATT TCTAAGATAA CCAAATCTAC ATAAGTGTTG 541 CTCCCCACAA AGTTCACCAA ACAAGACCTA TATACCTTTT CAACTACCAC AGACTCACCC 601 ACCGGAGTAG AAACACGAAT AGGCATATCA AGTAATTCAC AATGTAAATT TAGACCGTTA 661 G Predicted gene structure (within gDNA segment 7692 to 5021): Exon 1 6633 5973 ( 661 n); cDNA 1 661 ( 661 n); score: 0.882 MATCH C08HBa0294K15.1- SGN-E351414+ 0.882 661 1.000 C PGS_C08HBa0294K15.1-_SGN-E351414+ (6633 5973) Alignment (genomic DNA sequence = upper lines): CGAAAACTTC CATCCTTCTT CTTCACAAAT AAAATAGGAG CACCCCAAGG GGATGCACTT 6574 || ||||| | |||||||||| ||||||||| ||||| |||| |||||||||| ||||||||| CGGAAACTCC CATCCTTCTT CTTCACAAAC AAAATCGGAG CACCCCAAGG AGATGCACTT 60 GGTCTAATAA AGCCTTTGCT TAACAACTCT TGAAGTTGGG CCTTTAACTC TCTTAACTCA 6514 |||||||| | | |||||||| ||||||||| |||||||||| |||||||||| ||||||||| GGTCTAATGA AACCTTTGCT CAACAACTCT TGAAGTTGGG CCTTTAACTC TCTTAACTCT 120 GCGGGAGCCA TCCTATAATG GGGTATGGAA ATGGGGCGAG TACCCGGCTC CAGATCAATA 6454 ||||||||| | |||||| | |||||| ||| |||||||| | | ||||| || ||||| ||| ACGGGAGCCA TTCTATAAGG GGGTATAGAA ATGGGGCGTG TGCCCGGTTC AAGATCGATA 180 CAGAAATAAA TATCTCTATT CGGTGGCATA CGAGGAAGGT CTGCAGGAAA CACATCTAGA 6394 ||||| | || |||| |||| ||||||||| | |||||| | ||||||| || |||||| | | CAGAAGTCAA TATCCCTATC TGGTGGCATA CCAGGAAGAT CTGCAGGGAA CACATCCAAA 240 AACTCACGGA CTATCGAAAT CGACTCAATT GAAGGTACTT GGGTAGTATC ATCCTAGAGG 6334 ||||||| || |||| ||| ||||||||| |||||||||| ||||||| || ||||| ||| AACTCACAGA CTATAAAAAC CGACTCAATC GAAGGTACTT GGGTAGTGTC ATCCTTGAGA 300 TGTGTCAAGA AAGCTAAACA ACCCTTACTA ACCATTCTCT TAGCACGAAG AAAGGAGATA 6274 |||| ||||| |||||||||| || |||||| |||||| ||| |||||||||| ||||||||| TGTGCCAAGA AAGCTAAACA CCCTTTACTA ACCATTTTCT TAGCACGAAG AAAGGAGATG 360 ATACGAAATG GAGTGGAAGT GTAGTCACCC TCCCACACTA ACGGATCTGT CCCAGGCTTG 6214 || | | | || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGCACACCG GATTGGAAGT GTAGTCACCC TCCCACACTA ACGGATCTGT CCCAGGCTTG 420 GCCGACGTTA CAGTTTTAGC ATTACAATCT AAGATTGCAA AATTTGGAGA CAGCCAAGTC 6154 || | || | | |||||||| ||||||||| ||||| |||| | | ||||| ||||||||| GCTAATGTCA CCGTTTTAGC ATTACAATCC AAGATCGCAA ATTGCGGAGA AAGCCAAGTC 480 ATACCCAGAA TTACATCGAA GTCAACCATT TCTAAGATAA CCAAGTCTAC ATGAGTATTG 6094 |||||||||| ||||||| || ||||||||| |||||||||| |||| ||||| || ||| ||| ATACCCAGAA TTACATCAAA ATCAACCATT TCTAAGATAA CCAAATCTAC ATAAGTGTTG 540 TTCCCCACAA AAGTCACAAG ACAAGACCTA TACACTTTTT CAACTATCAC AGACTCACCC 6034 ||||||||| | |||| | |||||||||| || || |||| |||||| ||| |||||||||| CTCCCCACAA AGTTCACCAA ACAAGACCTA TATACCTTTT CAACTACCAC AGACTCACCC 600 ACCGGAGTAG AAACACGAAT AGGTATGTCA AGCAATTCAT AATGTAAATT AAGACCAGTA 5974 |||||||||| |||||||||| ||| || ||| || |||||| |||||||||| ||||| || ACCGGAGTAG AAACACGAAT AGGCATATCA AGTAATTCAC AATGTAAATT TAGACCGTTA 660 G 5973 | G 661 hqPGS_C08HBa0294K15.1-_SGN-E351414+ (6633 5973) ******************************************************************************** EST sequence 131 +strand 658 n (File: SGN-E355232+) 1 TCAATGCGAG GAAGAGGATA CTTGTTCTTA ATAGTTACCT TGTTCAGTTG TCTGTAGTCT 61 ATGCACATTC TAAAACTTCC ATCCTTCTTC TTCACAAATA AAACTGGAGC ACCCCAAGGA 121 GATGCACTTG GTCTAATGAA GACCTTGCTC AACAACTCTT GAAGTTGAGC CTTTAACTCT 181 CTTAATTCGG CGGGAGCCAT TCTATAAGGG GGTATAGAAA TGGGGCGTGT GCCTGGTTCA 241 AGATCGATAC AGAAGTCAAT ATCCCTATCT GGTGGCATAC CAGGAAGATC TGCAGGAAAC 301 ACGTCCAAAA ACTCGCGGAC TACCGAAACC GACTCAATTG AGGGTACTTG AGTAGTGTCA 361 TCCTTGAGAT GTGCCAAGAA AGCTGAACAC CCTTTACTAA CCATTTTCTT AGCACGAAGA 421 AAGGATATGA TACGCACCAG ATTGGAAGTG TAGTCACCCT CCCACACTAA CGGATCTGTC 481 CCAGGCTTGG CTAACGTCAC CGTTTTAGCA TTACAATCCA AGATCGCAAA ATTTGGAGAA 541 AGCCAAGTCA TACCCAGAAT TACATCAATG TCACCCATTT CTAAAAAACC AAATCTACAT 601 AAGTGTTGCT CCCCACGAAA TTCNACAAAA CAGAACTATG TACCTTTTCA ACTACCAC Predicted gene structure (within gDNA segment 7941 to 4175): Exon 1 6702 6044 ( 659 n); cDNA 1 658 ( 658 n); score: 0.869 MATCH C08HBa0294K15.1- SGN-E355232+ 0.869 659 1.002 C PGS_C08HBa0294K15.1-_SGN-E355232+ (6702 6044) Alignment (genomic DNA sequence = upper lines): TCGATGCGAG GAAGAGGATA CTTGTTCTTA ATGATTACCT TATTCAGTTG CCTATAGTCT 6643 || ||||||| |||||||||| |||||||||| || |||||| | |||||||| || |||||| TCAATGCGAG GAAGAGGATA CTTGTTCTTA ATAGTTACCT TGTTCAGTTG TCTGTAGTCT 60 ATGCACATCC GAAAACTTCC ATCCTTCTTC TTCACAAATA AAATAGGAGC ACCCCAAGGG 6583 |||||||| | ||||||||| |||||||||| |||||||||| ||| ||||| ||||||||| ATGCACATTC TAAAACTTCC ATCCTTCTTC TTCACAAATA AAACTGGAGC ACCCCAAGGA 120 GATGCACTTG GTCTAATAAA GCCTTTGCTT AACAACTCTT GAAGTTGGGC CTTTAACTCT 6523 |||||||||| ||||||| || | | ||||| |||||||||| ||||||| || |||||||||| GATGCACTTG GTCTAATGAA GACCTTGCTC AACAACTCTT GAAGTTGAGC CTTTAACTCT 180 CTTAACTCAG CGGGAGCCAT CCTATAATGG GGTATGGAAA TGGGGCGAGT ACCCGGCTCC 6463 ||||| || | |||||||||| |||||| || ||||| |||| ||||||| || || || || CTTAATTCGG CGGGAGCCAT TCTATAAGGG GGTATAGAAA TGGGGCGTGT GCCTGGTTCA 240 AGATCAATAC AGAAATAAAT ATCTCTATTC GGTGGCATAC GAGGAAGGTC TGCAGGAAAC 6403 ||||| |||| |||| | ||| ||| |||| |||||||||| |||||| || |||||||||| AGATCGATAC AGAAGTCAAT ATCCCTATCT GGTGGCATAC CAGGAAGATC TGCAGGAAAC 300 ACATCTAGAA ACTCACGGAC TATCGAAATC GACTCAATTG AAGGTACTTG GGTAGTATCA 6343 || || | || |||| ||||| || ||||| | |||||||||| | |||||||| ||||| ||| ACGTCCAAAA ACTCGCGGAC TACCGAAACC GACTCAATTG AGGGTACTTG AGTAGTGTCA 360 TCCTAGAGGT GTGTCAAGAA AGCTAAACAA CCCTTACTAA CCATTCTCTT AGCACGAAGA 6283 |||| ||| | ||| |||||| |||| |||| || ||||||| ||||| |||| |||||||||| TCCTTGAGAT GTGCCAAGAA AGCTGAACAC CCTTTACTAA CCATTTTCTT AGCACGAAGA 420 AAGGAGATAA TACGAAATGG AGTGGAAGTG TAGTCACCCT CCCACACTAA CGGATCTGTC 6223 ||||| || | |||| | | | |||||||| |||||||||| |||||||||| |||||||||| AAGGATATGA TACGCACCAG ATTGGAAGTG TAGTCACCCT CCCACACTAA CGGATCTGTC 480 CCAGGCTTGG CCGACGTTAC AGTTTTAGCA TTACAATCTA AGATTGCAAA ATTTGGAGAC 6163 |||||||||| | |||| || ||||||||| |||||||| | |||| ||||| ||||||||| CCAGGCTTGG CTAACGTCAC CGTTTTAGCA TTACAATCCA AGATCGCAAA ATTTGGAGAA 540 AGCCAAGTCA TACCCAGAAT TACATCGAAG TCAACCATTT CTAAGATAAC CAAGTCTACA 6103 |||||||||| |||||||||| |||||| | | ||| |||||| |||| | ||| ||| |||||| AGCCAAGTCA TACCCAGAAT TACATCAATG TCACCCATTT CTAA-AAAAC CAAATCTACA 599 TGAGTATTGT TCCCCACAAA AGTCACAAGA CAAGACCTAT ACACTTTTTC AACTATCAC 6044 | ||| ||| ||||||| || | || | | ||| |||| || ||||| ||||| ||| TAAGTGTTGC TCCCCACGAA ATTCNACAAA ACAGAACTAT GTACCTTTTC AACTACCAC 658 hqPGS_C08HBa0294K15.1-_SGN-E355232+ (6702 6044) ******************************************************************************** EST sequence 139 +strand 679 n (File: SGN-E368762+) 1 GTCTCACCCA ATTCTTCACT GTCTCAATCT TACAAGGATC CACCATCACT CCATCCTTAG 61 AAACCACGTG CCCCAAGAAG GACACTGCAT CTATCCAAAA CTCACACTTA GAGAACTTGG 121 CATAAAGCTT TTTCTCCCTC AACATTTCTA ATACAATTCT CAAATGCTCC TCATGTTCCT 181 TCTTACTATT AGAGTATATC AGTATATCAT CAATAAACAT GATGACAAAG AGATCCAAAT 241 ATGGCTTAAA ATCCCGTTCA TCAAGCTCAT GAACGCAGCA GGGGCATTCG TAAGACCAAA 301 AGACATCACT ACAAATTCGT AATGCCCATA CCTGGTTCTA AAAGCAGTCT TTGGCACATC 361 CGTTGCCCGT ATTTTCAATT GATGATAACC GGATCTCAAG TCAATCTTAG AGAAGACACA 421 AGCACCTTGT AACTGATCGA ACAAGTCATC AATGCGAGGA AGTGGATACT TGTTCTTAAT 481 AGTTACCTTG TTCAACTGCC GGTAGTCTAT GCACATCCGA AAACTCCCAT CCTTCTTCTT 541 CACAAACCAA ACCGGAGCAC CCCAAGGAGA TGCACTTGGT CTAATGAAGA CTTTGCTCAA 601 AAACTCTTGA AGTTGGGCCT TTAACTCTCT TAACTCCGCG GGAGCCATTC TATAAGGGGG 661 TATAGAAATG GGGCGAGTG Predicted gene structure (within gDNA segment 8372 to 5475): Exon 1 7151 6473 ( 679 n); cDNA 1 678 ( 678 n); score: 0.885 MATCH C08HBa0294K15.1- SGN-E368762+ 0.885 679 1.000 C PGS_C08HBa0294K15.1-_SGN-E368762+ (7151 6473) Alignment (genomic DNA sequence = upper lines): GTCTTACCCA ACTCTTCACT GCTTCGACCT TAGAAGGATC CACCATCACT TCATCCTTAT 7092 |||| ||||| | |||||||| | || | || || ||||||| |||||||||| |||||||| GTCTCACCCA ATTCTTCACT GTCTCAATCT TACAAGGATC CACCATCACT CCATCCTTAG 60 AAACCACACG CCCCAAGAAG GACACTGAAT CTAGCCAAAA CTCACACTTA GAGAATTTGG 7032 ||||||| | |||||||||| ||||||| || ||| |||||| |||||||||| ||||| |||| AAACCACGTG CCCCAAGAAG GACACTGCAT CTATCCAAAA CTCACACTTA GAGAACTTGG 120 CATAAAGCTC TTTCTCCCTC AACATTTCCA ATACCATTCT CAAGTGCTCC TCATGTTCTT 6972 ||||||||| |||||||||| |||||||| | |||| ||||| ||| |||||| |||||||| | CATAAAGCTT TTTCTCCCTC AACATTTCTA ATACAATTCT CAAATGCTCC TCATGTTCCT 180 TCTTGCTCTT TGAGTATACC AGTATGTCAT CGATGAATAC AATGACGAAG AGATCCAGAT 6912 |||| || || ||||||| | ||||| |||| | || || | ||||| ||| ||||||| || TCTTACTATT AGAGTATATC AGTATATCAT CAATAAACAT GATGACAAAG AGATCCAAAT 240 ATGGCTTAAA AATCCCGCTC ATTAAGCTCA TGAAAGCAGC AGGGGAATTC GTAAGCCCAA 6852 ||||||| || ||||||| || || ||||||| |||| ||||| ||||| |||| ||||| |||| ATGGCTT-AA AATCCCGTTC ATCAAGCTCA TGAACGCAGC AGGGGCATTC GTAAGACCAA 299 AAGACATTAC TAGGAACTCA TAATGCCCAT ACGTGGTCCA AAAAGCAGTC TTGGGCACAT 6792 ||||||| || || || || |||||||||| || |||| | |||||||||| || ||||||| AAGACATCAC TACAAATTCG TAATGCCCAT ACCTGGTTCT AAAAGCAGTC TTTGGCACAT 359 CCGTTGCCCG TATTTTTAAT TGATGATAAC CAGATCTCAA ATCAATTTTT TAGAAGGTAC 6732 |||||||||| |||||| ||| |||||||||| | |||||||| ||||| || ||||| || CCGTTGCCCG TATTTTCAAT TGATGATAAC CGGATCTCAA GTCAATCTTA GAGAAGACAC 419 AAGCACCTTG TAACTGATCG AACAAATCAT CGATGCGAGG AAGAGGATAC TTGTTCTTAA 6672 |||||||||| |||||||||| ||||| |||| | |||||||| ||| |||||| |||||||||| AAGCACCTTG TAACTGATCG AACAAGTCAT CAATGCGAGG AAGTGGATAC TTGTTCTTAA 479 TGATTACCTT ATTCAGTTGC CTATAGTCTA TGCACATCCG AAAACTTCCA TCCTTCTTCT 6612 | ||||||| |||| ||| | ||||||| |||||||||| |||||| ||| |||||||||| TAGTTACCTT GTTCAACTGC CGGTAGTCTA TGCACATCCG AAAACTCCCA TCCTTCTTCT 539 TCACAAATAA AATAGGAGCA CCCCAAGGGG ATGCACTTGG TCTAATAAAG CCTTTGCTTA 6552 ||||||| | || |||||| |||||||| | |||||||||| |||||| ||| ||||||| | TCACAAACCA AACCGGAGCA CCCCAAGGAG ATGCACTTGG TCTAATGAAG ACTTTGCTCA 599 ACAACTCTTG AAGTTGGGCC TTTAACTCTC TTAACTCAGC GGGAGCCATC CTATAATGGG 6492 | |||||||| |||||||||| |||||||||| ||||||| || ||||||||| |||||| ||| AAAACTCTTG AAGTTGGGCC TTTAACTCTC TTAACTCCGC GGGAGCCATT CTATAAGGGG 659 GTATGGAAAT GGGGCGAGT 6473 |||| ||||| ||||||||| GTATAGAAAT GGGGCGAGT 678 hqPGS_C08HBa0294K15.1-_SGN-E368762+ (7151 6473) ******************************************************************************** EST sequence 86 +strand 712 n (File: SGN-E379315+) 1 GAATCCCTTG ACAAATCGGC GGTAGTAGCT AGCTAACCCA ACAAAGCTCC TTATTTCTGA 61 CACATTAGTA GGTCTTACCC AATTCTTCAC TGTCTCAATC TTAGAAGGAT CCACCATCAC 121 TCCATCCTTA GAAACCACGT TCCCCAAGAA GGACACTACA TCTAGCCAAA ACTCACACTT 181 AGAGAACTTG GCATAAAACT TTTTCTCCCT CAACATTTCC AATACCATTC TCAAATGCTC 241 TTCATGTTCC TCCTTACTTT TAGAGTATAT CAGTATATCA TCAATAAATA CGATCACAAA 301 GAGATCCAAA TATGGCTTAA AAATCCCTTT TATTAAACTC ATAAACGCAG CAGGGGCATT 361 CATAAGACCA AAAGACATCA CTACAAATTT GTAATGCCCA TACCTGGTTC TAAAAGCAGT 421 CTTTGGCACA TCCGTTGCCC GTATTTTCAA TTGATGATAA CCGGATCTCA AGTCAATCTT 481 AGAAAAGACA CAAGCACCTT GTAACTGATC GAACAAGTCA TTAATGCGAG GAAGAGGATA 541 CTTGTTCTTT ATGGTTACCT TGTTNCACTG CCGGTAGCCT ATGCACATCC GAAAACTCCA 601 ATCCTTCTTC TTTACAAACA AAACCGGAGC ACCCCAAGGA GATGCAGTTG GTCTAATGAA 661 GCCTTTGCTC ACAACTCTTT GAAGTGGTCT TTTAACTCTC TTAACTCTGC GG Predicted gene structure (within gDNA segment 7831 to 4434): Exon 1 7221 6510 ( 712 n); cDNA 2 712 ( 711 n); score: 0.865 MATCH C08HBa0294K15.1- SGN-E379315+ 0.865 712 1.000 C PGS_C08HBa0294K15.1-_SGN-E379315+ (7221 6510) Alignment (genomic DNA sequence = upper lines): AATCCCTTGA CAAATCGACG GTAGTAGCTA GCTAAACCAA CGAAGCTCCT TACCTCTGTA 7162 |||||||||| ||||||| || |||||||||| ||||| |||| | |||||||| || |||| AATCCCTTGA CAAATCGGCG GTAGTAGCTA GCTAACCCAA CAAAGCTCCT TATTTCTGAC 61 ACATTAGTAG GTCTTACCCA ACTCTTCACT GCTTCGACCT TAGAAGGATC CACCATCACT 7102 |||||||||| |||||||||| | |||||||| | || | || |||||||||| |||||||||| ACATTAGTAG GTCTTACCCA ATTCTTCACT GTCTCAATCT TAGAAGGATC CACCATCACT 121 TCATCCTTAT AAACCACACG CCCCAAGAAG GACACTGAAT CTAGCCAAAA CTCACACTTA 7042 |||||||| ||||||| |||||||||| |||||| || |||||||||| |||||||||| CCATCCTTAG AAACCACGTT CCCCAAGAAG GACACTACAT CTAGCCAAAA CTCACACTTA 181 GAGAATTTGG CATAAAGCTC TTTCTCCCTC AACATTTCCA ATACCATTCT CAAGTGCTCC 6982 ||||| |||| |||||| || |||||||||| |||||||||| |||||||||| ||| ||||| GAGAACTTGG CATAAAACTT TTTCTCCCTC AACATTTCCA ATACCATTCT CAAATGCTCT 241 TCATGTTCTT TCTTGCTCTT TGAGTATACC AGTATGTCAT CGATGAATAC AATGACGAAG 6922 |||||||| | ||| || || ||||||| | ||||| |||| | || ||||| || || ||| TCATGTTCCT CCTTACTTTT AGAGTATATC AGTATATCAT CAATAAATAC GATCACAAAG 301 AGATCCAGAT ATGGCTTAAA AATCCCGCTC ATTAAGCTCA TGAAAGCAGC AGGGGAATTC 6862 ||||||| || |||||||||| |||||| | ||||| |||| | || ||||| ||||| |||| AGATCCAAAT ATGGCTTAAA AATCCCTTTT ATTAAACTCA TAAACGCAGC AGGGGCATTC 361 GTAAGCCCAA AAGACATTAC TAGGAACTCA TAATGCCCAT ACGTGGTCCA AAAAGCAGTC 6802 |||| |||| ||||||| || || || | |||||||||| || |||| | |||||||||| ATAAGACCAA AAGACATCAC TACAAATTTG TAATGCCCAT ACCTGGTTCT AAAAGCAGTC 421 TTGGGCACAT CCGTTGCCCG TATTTTTAAT TGATGATAAC CAGATCTCAA ATCAATTTTT 6742 || ||||||| |||||||||| |||||| ||| |||||||||| | |||||||| ||||| || TTTGGCACAT CCGTTGCCCG TATTTTCAAT TGATGATAAC CGGATCTCAA GTCAATCTTA 481 TAGAAGGTAC AAGCACCTTG TAACTGATCG AACAAATCAT CGATGCGAGG AAGAGGATAC 6682 | ||| || |||||||||| |||||||||| ||||| |||| |||||||| |||||||||| GAAAAGACAC AAGCACCTTG TAACTGATCG AACAAGTCAT TAATGCGAGG AAGAGGATAC 541 TTGTTCTTAA TGATTACCTT ATTCAGTTGC CTATAGTCTA TGCACATCCG AAAACTTCCA 6622 |||||||| | || ||||||| || ||| | ||| ||| |||||||||| |||||| | | TTGTTCTTTA TGGTTACCTT GTTNCACTGC CGGTAGCCTA TGCACATCCG AAAACTCCAA 601 TCCTTCTTCT TCACAAATAA AATAGGAGCA CCCCAAGGGG ATGCACTTGG TCTAATAAAG 6562 |||||||||| | ||||| || || |||||| |||||||| | ||||| |||| |||||| ||| TCCTTCTTCT TTACAAACAA AACCGGAGCA CCCCAAGGAG ATGCAGTTGG TCTAATGAAG 661 CCTTTGCTTA ACAACTCTTG AAGTTGGGCC TTTAACTCTC TTAACTCAGC GG 6510 ||||||| | ||||||||| | ||| | |||||||||| ||||||| || || CCTTTGC-TC ACAACTCTTT GAAGTGGTCT TTTAACTCTC TTAACTCTGC GG 712 hqPGS_C08HBa0294K15.1-_SGN-E379315+ (7221 6510) ******************************************************************************** EST sequence 103 +strand 596 n (File: SGN-E375319+) 1 GAATCCCTTG ACAAATCGGC GGTAGTAGCT AGCTAACCCA ACAAAGCTCC TTATTTCTGA 61 CACATTAGTA GGTCTTACCC AATTCTTCAC TGTCTCAATC TTAGAAGGAT CCACCATCAC 121 TCCATCCTTA GAAACCACGT TCCCCAAGAA GGACACTACA TCTAGCCAAA ACTCACACTT 181 AGAGAACTTG GCATAAAACT TTTTCTCCCT CAACATTTCC AATACCATTC TCAAATGCTC 241 TTCATGTTCC TCCTTACTTT TAGAGTATAT CAGTATATCA TCAATAAATA CGATCACAAA 301 GAGATCCAAA TATGGCTTAA AAATCCCTTT TATTAAACTC ATAAACGCAG CAGGGGCATT 361 CATAAGACCA AAAGACATCA CTACAAATTT GTAATGCCCA TACCTGGTTC TAAAAGCAGT 421 CTTTGGCACA TCCGTTGCCC GTATTTTCAA TTGATGATAA CCGGATCTCA AGTCAATCTT 481 AGAAAAGACA CAAGCACCTT GTAACTGATC GAACAAGTCA TTAATGCGAG GAAGAGGATA 541 CTTGTTCTTT ATGGTTACCT TGTTCAACTG CCGGTAGCCT ATGCACATCC GAAAAC Predicted gene structure (within gDNA segment 7831 to 5594): Exon 1 7221 6627 ( 595 n); cDNA 2 596 ( 595 n); score: 0.872 MATCH C08HBa0294K15.1- SGN-E375319+ 0.872 595 0.998 C PGS_C08HBa0294K15.1-_SGN-E375319+ (7221 6627) Alignment (genomic DNA sequence = upper lines): AATCCCTTGA CAAATCGACG GTAGTAGCTA GCTAAACCAA CGAAGCTCCT TACCTCTGTA 7162 |||||||||| ||||||| || |||||||||| ||||| |||| | |||||||| || |||| AATCCCTTGA CAAATCGGCG GTAGTAGCTA GCTAACCCAA CAAAGCTCCT TATTTCTGAC 61 ACATTAGTAG GTCTTACCCA ACTCTTCACT GCTTCGACCT TAGAAGGATC CACCATCACT 7102 |||||||||| |||||||||| | |||||||| | || | || |||||||||| |||||||||| ACATTAGTAG GTCTTACCCA ATTCTTCACT GTCTCAATCT TAGAAGGATC CACCATCACT 121 TCATCCTTAT AAACCACACG CCCCAAGAAG GACACTGAAT CTAGCCAAAA CTCACACTTA 7042 |||||||| ||||||| |||||||||| |||||| || |||||||||| |||||||||| CCATCCTTAG AAACCACGTT CCCCAAGAAG GACACTACAT CTAGCCAAAA CTCACACTTA 181 GAGAATTTGG CATAAAGCTC TTTCTCCCTC AACATTTCCA ATACCATTCT CAAGTGCTCC 6982 ||||| |||| |||||| || |||||||||| |||||||||| |||||||||| ||| ||||| GAGAACTTGG CATAAAACTT TTTCTCCCTC AACATTTCCA ATACCATTCT CAAATGCTCT 241 TCATGTTCTT TCTTGCTCTT TGAGTATACC AGTATGTCAT CGATGAATAC AATGACGAAG 6922 |||||||| | ||| || || ||||||| | ||||| |||| | || ||||| || || ||| TCATGTTCCT CCTTACTTTT AGAGTATATC AGTATATCAT CAATAAATAC GATCACAAAG 301 AGATCCAGAT ATGGCTTAAA AATCCCGCTC ATTAAGCTCA TGAAAGCAGC AGGGGAATTC 6862 ||||||| || |||||||||| |||||| | ||||| |||| | || ||||| ||||| |||| AGATCCAAAT ATGGCTTAAA AATCCCTTTT ATTAAACTCA TAAACGCAGC AGGGGCATTC 361 GTAAGCCCAA AAGACATTAC TAGGAACTCA TAATGCCCAT ACGTGGTCCA AAAAGCAGTC 6802 |||| |||| ||||||| || || || | |||||||||| || |||| | |||||||||| ATAAGACCAA AAGACATCAC TACAAATTTG TAATGCCCAT ACCTGGTTCT AAAAGCAGTC 421 TTGGGCACAT CCGTTGCCCG TATTTTTAAT TGATGATAAC CAGATCTCAA ATCAATTTTT 6742 || ||||||| |||||||||| |||||| ||| |||||||||| | |||||||| ||||| || TTTGGCACAT CCGTTGCCCG TATTTTCAAT TGATGATAAC CGGATCTCAA GTCAATCTTA 481 TAGAAGGTAC AAGCACCTTG TAACTGATCG AACAAATCAT CGATGCGAGG AAGAGGATAC 6682 | ||| || |||||||||| |||||||||| ||||| |||| |||||||| |||||||||| GAAAAGACAC AAGCACCTTG TAACTGATCG AACAAGTCAT TAATGCGAGG AAGAGGATAC 541 TTGTTCTTAA TGATTACCTT ATTCAGTTGC CTATAGTCTA TGCACATCCG AAAAC 6627 |||||||| | || ||||||| |||| ||| | ||| ||| |||||||||| ||||| TTGTTCTTTA TGGTTACCTT GTTCAACTGC CGGTAGCCTA TGCACATCCG AAAAC 596 hqPGS_C08HBa0294K15.1-_SGN-E375319+ (7221 6627) ******************************************************************************** EST sequence 72 +strand 737 n (File: SGN-E578078+) 1 GAACTCATAA TGCTCATACC TGGTCCGAAA AGCAGTCTTG GGCACATCTG CTGCTCGTAT 61 TTTCAATTGA TGATAACCAG ATCTCAAGTC GATTTTTGAG AAGGTACAAG CACCTTGTAA 121 CTGATCGAAC AAATCATCAA TGTGAGGAAG ATATTTTCGA AAATTCTCTC ACTATGGTGA 181 TTGACTCAAT TGGAGGAATA TCGGACTCAA GATCTTTGAC TCTTACAATA TGGTAAATTC 241 ACACTTTTGA GATTATTTTG CAATATTTTA AACAAGAGAT GATATGACCT TTAGGAATTA 301 AATTACTGCC ATTCCACTCT AAGACAGGTT CATTAGGAAA GTTGAATTTA ACAACTCTTG 361 TTCGACAGTC TATGGAAGCA TAACAAGCAT GCAACCAATC CATTCCCAAG ATAAAATAAA 421 AATCGACCAT ATCGAATTCC ACCAAATCCA CCCAAGTAAC TCTATTGGGG AAATATATAG 481 GATAACTCCT AAAGACTCTT CTAGCAACAA TGGAGTCACC TACCGGGGTT GTAACAAAAA 541 ATATTTTCTC AAAGGCCTGG CGTCGAATAT GAAGAGACAT ACTCACCCGT TATGGATGCA 601 ATAACATTGG TTTATCTCAT TAGTTTCACA GTCCATGAGC AACTTGAAAT GCATTTGATG 661 GATGTGGTTA CAACCTACCT TTATGGATCA TTTAAATATG AGATATACAT GAAAATTCCT 721 GAAGGATTTG CGATTGC Predicted gene structure (within gDNA segment 7681 to 101): Exon 1 6838 6678 ( 161 n); cDNA 1 160 ( 160 n); score: 0.888 Intron 1 6677 6395 ( 283 n); Pd: 0.000 (s: 0.84), Pa: 0.000 (s: 0.64) Exon 2 6394 6012 ( 383 n); cDNA 161 542 ( 382 n); score: 0.534 Intron 2 6011 2107 (3905 n); Pd: 0.945 (s: 0.62), Pa: 0.000 (s: 0) Exon 3 2106 2096 ( 11 n); cDNA 543 553 ( 11 n); score: 0.818 MATCH C08HBa0294K15.1- SGN-E578078+ 0.639 555 0.753 C PGS_C08HBa0294K15.1-_SGN-E578078+ (6838 6678,6394 6012,2106 2096) Alignment (genomic DNA sequence = upper lines): GAACTCATAA TGCCCATACG TGGTCCAAAA AGCAGTCTTG GGCACATCCG TTGCCCGTAT 6779 |||||||||| ||| ||||| |||||| ||| |||||||||| |||||||| | ||| ||||| GAACTCATAA TGCTCATACC TGGTCCGAAA AGCAGTCTTG GGCACATCTG CTGCTCGTAT 60 TTTTAATTGA TGATAACCAG ATCTCAAATC AATTTTTTAG AAGGTACAAG CACCTTGTAA 6719 ||| |||||| |||||||||| ||||||| || |||||| || |||||||||| |||||||||| TTTCAATTGA TGATAACCAG ATCTCAAGTC GATTTTTGAG AAGGTACAAG CACCTTGTAA 120 CTGATCGAAC AAATCATCGA TGCGAGGAAG AGGATACTTG TTCTTAATGA TTACCTTATT 6659 |||||||||| |||||||| | || ||||||| | || | | CTGATCGAAC AAATCATCAA TGTGAGGAAG A-TATTTTCG A......... .......... 160 CAGTTGCCTA TAGTCTATGC ACATCCGAAA ACTTCCATCC TTCTTCTTCA CAAATAAAAT 6599 .......... .......... .......... .......... .......... .......... 160 AGGAGCACCC CAAGGGGATG CACTTGGTCT AATAAAGCCT TTGCTTAACA ACTCTTGAAG 6539 .......... .......... .......... .......... .......... .......... 160 TTGGGCCTTT AACTCTCTTA ACTCAGCGGG AGCCATCCTA TAATGGGGTA TGGAAATGGG 6479 .......... .......... .......... .......... .......... .......... 160 GCGAGTACCC GGCTCCAGAT CAATACAGAA ATAAATATCT CTATTCGGTG GCATACGAGG 6419 .......... .......... .......... .......... .......... .......... 160 AAGGTCTGCA GGAAACACAT CTAGAAACTC ACGGACTATC GAAATCGACT CAATTGAAGG 6359 ||| || | ||||| | || |||| |||||| ||| .......... .......... ....AAATTC TCTCACTATG GTGATTGACT CAATTGGAGG 196 TACTTGGGTA GTATCATCCT AGAGGTGTGT CAAGAAAGCT AAACAACCCT TACTA-ACCA 6300 | | || | ||| | || | | ||| | | || || || | | | | AATATCGGAC TCAAGATCTT TGA-CTCTTA CAATATGGTA AATTCACACT TTTGAGATTA 255 TTCTCTTAGC ACGAAGAAAG GAGATAATAC GAAATGGAGT GGAAGTGTAG T-C-ACCCTC 6242 || | | | | | ||||| ||| || | | |||| | | | | || | TTTTGCAATA TTTTAAACAA GAGATGATAT GACCTTTA-- GGAATTAAAT TACTGCCATT 313 CCACACTAAC GGATCTGTCC CAGGCTTGGC CGACGTTACA GTTTTAGCAT TACAATCTAA 6182 |||| |||| | | ||| | | | ||| | | | ||| |||| CCACTCTAAG ACAGGTTCAT TAGGAAAGTT GAATTTAACA ACTCTTGTTC GACAGTCTAT 373 GATTGCAAAA TTTGGAGACA GCCAAGTCAT ACCCAGAATT ACATCGAAGT CAACCATTTC 6122 | ||| || | | || |||| ||| |||| || | || || | | ||||| || GGAAGCATAA CAAGCATGCA ACCAATCCAT TCCCAAGATA AAATAAAAAT CGACCATATC 433 TAAGATAACC AAGTCTACAT GAGTATTGTT CCCCACAAAA GTCACAAGAC AAGACCTATA 6062 || ||| || || || |||| | ||| | | || || |||| | GAATTCCACC AAATCCACCC AAGTAACTCT ATTGGGGAAA TATATAGGAT AACTCCTAAA 493 CACTTTTTCA ACTATCACAG ACTCACCCAC CGGAGTAGAA ACACGAATAG GTATGTCAAG 6002 ||| || | | | | | | ||||| || ||| || | | ||| || | GACTCTTCTA GCAACAATGG AGTCACCTAC CGGGGTTGTA ACA-AAAAAT .......... 542 CAATTCATAA TGTAAATTAA GACCAGTAGC AAATGAGGAA GATACATATG AAAATGTGGA 5942 .......... .......... .......... .......... .......... .......... 542 TCCAGGATCA AACAATACAG AAGCCATGCA ATCACAAACC AAAAGATTAC CTGTGATGAC 5882 .......... .......... .......... .......... .......... .......... 542 GGCATCAGAT GTCTCCGCTT CAGACCTCCC AGGGAAAGCA TAACAATGGG CCCTATCACC 5822 .......... .......... .......... .......... .......... .......... 542 GGTCTGCCCG TTGCCCCTAC AATGTTGAGC TACAGAAGTT CCAGTTTGCC TGTCACCCCG 5762 .......... .......... .......... .......... .......... .......... 542 GCCGTTTTGG TGACCACCAT TACCTCGGCC ACCACGTCCT CCAGAATAGC GACCTCTCCC 5702 .......... .......... .......... .......... .......... .......... 542 ATGACCACCT CTACCTCTGA CTATTGGGGG TCTGTAACTC TGTTTTGGAC AATACCTCTT 5642 .......... .......... .......... .......... .......... .......... 542 AATATGTCCA GTCTCTCCAC ATCCATAACA CTCTCTTGAT TAAAGCATAG GTCTCTATGA 5582 .......... .......... .......... .......... .......... .......... 542 GAACGACAGA GTCTGGGGAT AACCTCCAAA CTCAGAGAAA TGTTGACCGG TCTGCGGTGG 5522 .......... .......... .......... .......... .......... .......... 542 ACCCCCAGCT ACAGCTTGTA GTGAAGACTG AATAGGTCGG GCTGGATAAC CTCCTGAACT 5462 .......... .......... .......... .......... .......... .......... 542 CTGCCCTCTG GATTAAAAAC CATTAAAATC ACCTCCTTTA TGAAACTTCT TAGATATTGA 5402 .......... .......... .......... .......... .......... .......... 542 TGCCATGGTG AAGTCGTCTG GCTTCACTCC CTCCACTTCT ATTACAAAAT CTACCACCTC 5342 .......... .......... .......... .......... .......... .......... 542 CTGAAAGGAT TTTGCTGCAG CAGCTACCTG TAAGGCTGAA ATCCGCAAAT CTGACCTCAA 5282 .......... .......... .......... .......... .......... .......... 542 CCCTTTCACG AAACGACGAA TCCGCTCTTG TGGACTGAAG CAAAGCTGGG TGGCATACCT 5222 .......... .......... .......... .......... .......... .......... 542 GGATAGTGCA CAAAACTTAG CCTCATAAGC AGTAACCGAC ATCCTGCCTT GCTCTAAGCT 5162 .......... .......... .......... .......... .......... .......... 542 CAGGAACTTA TCTCTCCTCC TATCCCTCAA AGTCCGAGGT ATATAATTCT CCATAAACAA 5102 .......... .......... .......... .......... .......... .......... 542 GCTAGAGAAT GATGCCCAAG TCATAGGTGG TGACTGTGCT GGTTGACACT CAACATATGA 5042 .......... .......... .......... .......... .......... .......... 542 CCGCCACCAC ATTTTGGCGT TCCCCTAAAA CTGATAGGTC ACAAACTCAA CGCCAAATCG 4982 .......... .......... .......... .......... .......... .......... 542 TTCCACTATG CGCATCTTAT GTAGCAACTC ATGACAATCA ACCAGAAAGT CATAGGCATC 4922 .......... .......... .......... .......... .......... .......... 542 CTCAGATTCA GCACCCTTGA AAACTGGAGG TTTCAACTTC AAGAACTTAC TGAAAAGTTC 4862 .......... .......... .......... .......... .......... .......... 542 GTGCTGGTCA CTTGTCATTA TAGGCCCTGT AGTCAACCGA GGAAACGTGC CTATTTCCAA 4802 .......... .......... .......... .......... .......... .......... 542 TGAGGCATCC ATGCGGGGAG CCACAGCAGC TGTATGTTGT ACTCCCGGAA CCTGAGGTAC 4742 .......... .......... .......... .......... .......... .......... 542 TGGTGCAGAA AACACTGGAG GTGTCTGGCC TTGATCAGAT AACCCGCTAA GATAAGCAAG 4682 .......... .......... .......... .......... .......... .......... 542 AACCTGATTA ATCATCTCTA GGGTAGGTTG GGGTGGTAAT TCCTCGTTCT GCACTTGTTC 4622 .......... .......... .......... .......... .......... .......... 542 ATTTCCCCCT TCCTCACCCT CTCTTAATAC TTCCTCAGTC GGTGGAGGAG TCACCGCCCT 4562 .......... .......... .......... .......... .......... .......... 542 AGTACCCTCT ACCGCGGCCT CTTGCCACTG CTCCTCTTCG AGCTACAGCC TCAGTGGCTG 4502 .......... .......... .......... .......... .......... .......... 542 GTTCAGACGC ATCTTGTTTT GCCGGTGTTG GTGTCGGCGC AGCTGTTGCT CTAGTTCTAA 4442 .......... .......... .......... .......... .......... .......... 542 CCATCTGCGA AATAGAGTGA AGATGGTCAG ATACCAATTT GTATCACCTA GATACCAATT 4382 .......... .......... .......... .......... .......... .......... 542 GGATCCAAGT AATAGCACGA AAGAAAGAAA GAATGGAATT TTCCTTAAGT CTTATAGCCT 4322 .......... .......... .......... .......... .......... .......... 542 CTCAAAGAAA AGTAAAGGCG TCCCCCTACC ATTCCTCAAG ACTCTACTAG ACTTGTTCTT 4262 .......... .......... .......... .......... .......... .......... 542 GTGTGATGAG ACCAACGAAC CTAATGCTCT GATACCAAGT TTGTCACGAC CCAAAACGAG 4202 .......... .......... .......... .......... .......... .......... 542 CCGTGAGTGG CACCCACACT TACCCTCCTA TGTGAGCGAA CCAACCAATC TAAACCCCAA 4142 .......... .......... .......... .......... .......... .......... 542 CATTTCAACC ATAATAAACA GAATATAATA CGGAAAACTT AAAACTCATT AACGAAATCA 4082 .......... .......... .......... .......... .......... .......... 542 ATAATTAACT TCTAAAACTC AAAACTTATC ATTATCCCCA AAATCTGGAA GTCATCATCA 4022 .......... .......... .......... .......... .......... .......... 542 CAAGAACATC TATCCTCAAA TTACTAAATC TAAGAGTATC TAAGAAGCTA AAATAAATAA 3962 .......... .......... .......... .......... .......... .......... 542 AAGAGATGGT CCATGTCCGA ACTTCAAGAC ATCAAGACCT GAAAGAAAGA ATCCAGTCCG 3902 .......... .......... .......... .......... .......... .......... 542 AGCTAGGAAC AATAGCTCAC CTGAAATCTG ATTATGCTGA AGTCTGGCTA GAGTTGCGGT 3842 .......... .......... .......... .......... .......... .......... 542 TGAGTCGAAG TTGTGGCACG TTTGCTGCAC TCCACAAATA ACAAAGAAAG AAACATACAA 3782 .......... .......... .......... .......... .......... .......... 542 GTAGGGGTCA GTACAAGGCA CAAGTACTGA GTAGGTATCA TCGGCCAACT CAAAATAGAA 3722 .......... .......... .......... .......... .......... .......... 542 AGCAATATAT ATCAGATAAT AACATAAAAT CAACTACAAT ACTAAACAGG TGACAACAAC 3662 .......... .......... .......... .......... .......... .......... 542 AAGTACCATA ACCATTGGGC ACAACCCAAG CACATCTATG AGGACTCAAG CCTCCACACC 3602 .......... .......... .......... .......... .......... .......... 542 ATACTCATTT GGGAAACAGG TTCATTAAAT CTGAGTATAT TAGCATAATT CAAGATTCAT 3542 .......... .......... .......... .......... .......... .......... 542 TCTCTTTACT ATCCTGGTGT CAAAACGTGA CACCCGATCC ATACTATCCT GGTGTCGGAA 3482 .......... .......... .......... .......... .......... .......... 542 CGTGACACCC GATCTATACT ATCCTGGTGT CGGAACGTGA CACCCGATCC ATACTATCCT 3422 .......... .......... .......... .......... .......... .......... 542 GGTGTCGAAA CGTGACACTC CGATCCCCTA ATTCTCATTC TTTCAGTTCA TCAAGCCTTC 3362 .......... .......... .......... .......... .......... .......... 542 TTTTATACCA AGGCATCATC ATTAACAAAG AGGTCTTAAG GTTTAAGATT CAATAGCCTC 3302 .......... .......... .......... .......... .......... .......... 542 ATCATGCTTA TTTTATCACA ATTATATAAT CACGTCATGC AAGCACACAA TTAAGCATAT 3242 .......... .......... .......... .......... .......... .......... 542 AGAAGACTTT ACAATACTAC CCAACACATA TCATTCGCTA TTAAGAGTTT ACTATGAAAT 3182 .......... .......... .......... .......... .......... .......... 542 AGCATAAACC ATAACCTACC TCCAGCGAAG AATTCGTGAT CACGCAAGCT ACTCCTCAAG 3122 .......... .......... .......... .......... .......... .......... 542 TTCTTTGCTT TCCTCTTCGT TCTTCTCTCC CTCTCACTCG TTCTCCCTTC TTTTTCTTTT 3062 .......... .......... .......... .......... .......... .......... 542 TTTTTTTAAT TTTCTCCTCT TTCAAAATCC CTTTGTTTTA CCCTATTTAT CATATAATTA 3002 .......... .......... .......... .......... .......... .......... 542 AGTATAAAAG ATGCTAAAAG TAACCCATTA CTTATTCCAA GGTTGTCTTC TTTAACCCCC 2942 .......... .......... .......... .......... .......... .......... 542 AAGAAATTGA ATTATTAACA TTAAACCACT AACCTTATAA TCATAAGCAG GAATAGTCCA 2882 .......... .......... .......... .......... .......... .......... 542 AAACACCCCT TAAAAAATTT TAACAGAAAT CCGACCCAGT CAGGGTTACT CAGTCTGTGA 2822 .......... .......... .......... .......... .......... .......... 542 CGGTCCGTCG TGCCTGCGAT AGTCCGTCCT GCTAAGTCGT TACAGAGTTC AGAGACTCAA 2762 .......... .......... .......... .......... .......... .......... 542 TTTTTATTTA AGACCATGTG ACGGTCCGTC GTGCCTACGA CGGTCCGTCC TGCTCTTCCG 2702 .......... .......... .......... .......... .......... .......... 542 TTGCGAAGTT CAGAGAGTTG TTCTCAGTAC CCAATTTTTC AGAAACTAAG TATTTTGGAA 2642 .......... .......... .......... .......... .......... .......... 542 CGAGACCCCC TCGACGGTCC GTCGTGCCCA TGACGGTCCG TCGTGGGATC CGTCAACCCA 2582 .......... .......... .......... .......... .......... .......... 542 GACAGTTATT ACCAGAAATA AACTCTACTG CTCAAAACGA CTAACAGGTC GTTACATGAG 2522 .......... .......... .......... .......... .......... .......... 542 TTTAATGTTC TGGCATTACT TCAAAAGTTG TGAACTAATT TGAATTTGCT ATTTGATATT 2462 .......... .......... .......... .......... .......... .......... 542 TGTGAACTAA TGCATAATAT CATCACTTTT AAACAGTAGG GCTTCGTAAA TAAAACTAAA 2402 .......... .......... .......... .......... .......... .......... 542 CTTCATCACG TCTAATGTTT TTGCAAAAGC TTGTTTATCC CTCCCTTCCA ATTCCTCAGT 2342 .......... .......... .......... .......... .......... .......... 542 AGTGGCTTTA CGACCGCAAA AAGAATTTTT CAATAATTAC TATCTGTGAA TAGTACAAAC 2282 .......... .......... .......... .......... .......... .......... 542 AACATTATCA CCCGTAACAA AATTGGGAAT GAAAGTATTG GATTACTAAT GGGTTATAGG 2222 .......... .......... .......... .......... .......... .......... 542 AATTTTGGGC GGGTCTTTAC TTGGGTGAGT TATTTTAATC CAATTTTTAT TTAGAATTTT 2162 .......... .......... .......... .......... .......... .......... 542 GTTTTTATTA TAAAAAAATA ATAATGATGT GGTTGAAGTA ATGACATTAC CAAACCTTTT 2102 |||| .......... .......... .......... .......... .......... .....ATTTT 547 CTTAAA 2096 || ||| CTCAAA 553 hqPGS_C08HBa0294K15.1-_SGN-E578078+ (6838 6678) ******************************************************************************** EST sequence 93 +strand 526 n (File: SGN-E204434+) 1 GAATCCCTTG ACAAATCGGC GGTAGTAGCT AGCTAACCCA ACAAAGCTCC TTATTTCTGA 61 CACATTAGTA GGTCTTACCC AATTCTTCAC TGTCTCAATC TTAGAAGGAT CCACCATCAC 121 TCCATCCTTA GAAACCACGT TCCCCAAGAA GGACACTACA TCTAGCCAAA ACTCACACTT 181 AGAGAACTTG GCATAAAACT TTTTCTCCCT CAACATTTCC AATACCATTC TCAAATGCTC 241 TTCATGTTCC TCCTTACTTT TAGAGTATAT CAGTATATCA TCAATAAATA CGATCACAAA 301 GAGATCCAAA TATGGCTTAA AAATCCCTTT TATTAAACTC ATAAACGCAG CAGGGGCATT 361 CATAAGACCA AAAGACATCA CTACAAATTT GTAATGCCCA TACCTGGTTC TAAAAGCAGT 421 CTTTGGCACA TCCGTTGCCC GTATTTTCAA TTGATGATAA CCGGATCTCA AGTCAATCTT 481 AGAAAAGACA CAAGCACCTT GTAACTGATC GAACAAGTCA TTAATG Predicted gene structure (within gDNA segment 7831 to 3459): Exon 1 7221 6697 ( 525 n); cDNA 2 526 ( 525 n); score: 0.870 MATCH C08HBa0294K15.1- SGN-E204434+ 0.870 525 0.998 C PGS_C08HBa0294K15.1-_SGN-E204434+ (7221 6697) Alignment (genomic DNA sequence = upper lines): AATCCCTTGA CAAATCGACG GTAGTAGCTA GCTAAACCAA CGAAGCTCCT TACCTCTGTA 7162 |||||||||| ||||||| || |||||||||| ||||| |||| | |||||||| || |||| AATCCCTTGA CAAATCGGCG GTAGTAGCTA GCTAACCCAA CAAAGCTCCT TATTTCTGAC 61 ACATTAGTAG GTCTTACCCA ACTCTTCACT GCTTCGACCT TAGAAGGATC CACCATCACT 7102 |||||||||| |||||||||| | |||||||| | || | || |||||||||| |||||||||| ACATTAGTAG GTCTTACCCA ATTCTTCACT GTCTCAATCT TAGAAGGATC CACCATCACT 121 TCATCCTTAT AAACCACACG CCCCAAGAAG GACACTGAAT CTAGCCAAAA CTCACACTTA 7042 |||||||| ||||||| |||||||||| |||||| || |||||||||| |||||||||| CCATCCTTAG AAACCACGTT CCCCAAGAAG GACACTACAT CTAGCCAAAA CTCACACTTA 181 GAGAATTTGG CATAAAGCTC TTTCTCCCTC AACATTTCCA ATACCATTCT CAAGTGCTCC 6982 ||||| |||| |||||| || |||||||||| |||||||||| |||||||||| ||| ||||| GAGAACTTGG CATAAAACTT TTTCTCCCTC AACATTTCCA ATACCATTCT CAAATGCTCT 241 TCATGTTCTT TCTTGCTCTT TGAGTATACC AGTATGTCAT CGATGAATAC AATGACGAAG 6922 |||||||| | ||| || || ||||||| | ||||| |||| | || ||||| || || ||| TCATGTTCCT CCTTACTTTT AGAGTATATC AGTATATCAT CAATAAATAC GATCACAAAG 301 AGATCCAGAT ATGGCTTAAA AATCCCGCTC ATTAAGCTCA TGAAAGCAGC AGGGGAATTC 6862 ||||||| || |||||||||| |||||| | ||||| |||| | || ||||| ||||| |||| AGATCCAAAT ATGGCTTAAA AATCCCTTTT ATTAAACTCA TAAACGCAGC AGGGGCATTC 361 GTAAGCCCAA AAGACATTAC TAGGAACTCA TAATGCCCAT ACGTGGTCCA AAAAGCAGTC 6802 |||| |||| ||||||| || || || | |||||||||| || |||| | |||||||||| ATAAGACCAA AAGACATCAC TACAAATTTG TAATGCCCAT ACCTGGTTCT AAAAGCAGTC 421 TTGGGCACAT CCGTTGCCCG TATTTTTAAT TGATGATAAC CAGATCTCAA ATCAATTTTT 6742 || ||||||| |||||||||| |||||| ||| |||||||||| | |||||||| ||||| || TTTGGCACAT CCGTTGCCCG TATTTTCAAT TGATGATAAC CGGATCTCAA GTCAATCTTA 481 TAGAAGGTAC AAGCACCTTG TAACTGATCG AACAAATCAT CGATG 6697 | ||| || |||||||||| |||||||||| ||||| |||| ||| GAAAAGACAC AAGCACCTTG TAACTGATCG AACAAGTCAT TAATG 526 hqPGS_C08HBa0294K15.1-_SGN-E204434+ (7221 6697) ******************************************************************************** EST sequence 151 +strand 358 n (File: SGN-E240817+) 1 GTCTCACCCA TTTCTTCACT GTCTCAATCT TACCAGGATC CACCATCACT CCATCCTTAG 61 AAACCACGTG CCCCAAGAAG GACACTGCAT CTATCCAAAA CTCACACTTA GAGAACTTGG 121 CATAAAGCTT TTTCTCCCTC AACATTTCTA ATACAATTCT CAAATGCTCC TCATGTTCCT 181 TCTTACTATT AGAGGATATC AGTATATCAT CAATGAACAT GATGACGCAG AGATCCAAAT 241 ATGGCTTAAA ATCCCGTTCA TCAAGCTCAT GAACGCAGCA GGGGCATTCG TAAGACCAAA 301 AGACATCACT ACAAATTCGT AATGCCCATA CCTGGTTCTA AAAGCAGTCT TTGGCACA Predicted gene structure (within gDNA segment 8372 to 4294): Exon 1 7151 6793 ( 359 n); cDNA 1 358 ( 358 n); score: 0.866 MATCH C08HBa0294K15.1- SGN-E240817+ 0.866 359 1.003 C PGS_C08HBa0294K15.1-_SGN-E240817+ (7151 6793) Alignment (genomic DNA sequence = upper lines): GTCTTACCCA ACTCTTCACT GCTTCGACCT TAGAAGGATC CACCATCACT TCATCCTTAT 7092 |||| ||||| |||||||| | || | || || |||||| |||||||||| |||||||| GTCTCACCCA TTTCTTCACT GTCTCAATCT TACCAGGATC CACCATCACT CCATCCTTAG 60 AAACCACACG CCCCAAGAAG GACACTGAAT CTAGCCAAAA CTCACACTTA GAGAATTTGG 7032 ||||||| | |||||||||| ||||||| || ||| |||||| |||||||||| ||||| |||| AAACCACGTG CCCCAAGAAG GACACTGCAT CTATCCAAAA CTCACACTTA GAGAACTTGG 120 CATAAAGCTC TTTCTCCCTC AACATTTCCA ATACCATTCT CAAGTGCTCC TCATGTTCTT 6972 ||||||||| |||||||||| |||||||| | |||| ||||| ||| |||||| |||||||| | CATAAAGCTT TTTCTCCCTC AACATTTCTA ATACAATTCT CAAATGCTCC TCATGTTCCT 180 TCTTGCTCTT TGAGTATACC AGTATGTCAT CGATGAATAC AATGACGAAG AGATCCAGAT 6912 |||| || || ||| ||| | ||||| |||| | ||||| | |||||| || ||||||| || TCTTACTATT AGAGGATATC AGTATATCAT CAATGAACAT GATGACGCAG AGATCCAAAT 240 ATGGCTTAAA AATCCCGCTC ATTAAGCTCA TGAAAGCAGC AGGGGAATTC GTAAGCCCAA 6852 ||||||| || ||||||| || || ||||||| |||| ||||| ||||| |||| ||||| |||| ATGGCTT-AA AATCCCGTTC ATCAAGCTCA TGAACGCAGC AGGGGCATTC GTAAGACCAA 299 AAGACATTAC TAGGAACTCA TAATGCCCAT ACGTGGTCCA AAAAGCAGTC TTGGGCACA 6793 ||||||| || || || || |||||||||| || |||| | |||||||||| || |||||| AAGACATCAC TACAAATTCG TAATGCCCAT ACCTGGTTCT AAAAGCAGTC TTTGGCACA 358 hqPGS_C08HBa0294K15.1-_SGN-E240817+ (7151 6793) ******************************************************************************** EST sequence 125 +strand 587 n (File: SGN-E352950+) 1 CCTCTGTAAG AATAGTGTGA ATCAAATCGT CGGCACGGGG TACACATACC TTTCCCTTAA 61 TCCTCAAAAC ACCTTCCTTA TCGATTTTTG CTTCTTTAGC CTCTCCTCGC ATTACCTTAT 121 CTCGAATCCA GATCAGTTTC TCATCGGTAA ACTGCTTTCC TTTAATCTTA TCAAGAAAGG 181 AAGATCTTGC CTCCACACAA GCCAAAAATT CTCCCTTCTC ATTTAATTCT AGCCTCATAA 241 GGTCATTAGC CAGAGTCTGA ACCTCTCTAG CCAATGGGCA TCTAGAAACC TGCAAGTGAG 301 CTAGACTTCC CATGCTCCCT GCCTTTCTAC TTAAAGCATC TGCCACAACA TTAGCCTTTC 361 CCGGATGATA CAAGATAGTG ATATCATAGT CCTTCAGTAG CTCCATCGAT CTCCTCTGTC 421 TCAAATTCAA ATCTTTCTGA GTAAAGACAT ACTGTAAACT ACGATGATCC ATATAGACTT 481 CACACTTAAC CCCATAGAGA TAATGTCTCT ATTACTTTAA TGCAATCACT ACTGCCGCTA 541 ACTCCAAATC ATGGGTCGGA TAATTACGTT CATGCACCTT TAATTGC Predicted gene structure (within gDNA segment 9095 to 6840): Exon 1 8034 7450 ( 585 n); cDNA 3 587 ( 585 n); score: 0.940 MATCH C08HBa0294K15.1- SGN-E352950+ 0.940 585 0.997 C PGS_C08HBa0294K15.1-_SGN-E352950+ (8034 7450) Alignment (genomic DNA sequence = upper lines): TCTGTAAGAA CAGTGTGAAT CAAGTCATCG ACGCGGGGTA CACGTACCCT TCCCTTAATC 7975 |||||||||| ||||||||| ||| || ||| | ||||||| ||| |||| | |||||||||| TCTGTAAGAA TAGTGTGAAT CAAATCGTCG GCACGGGGTA CACATACCTT TCCCTTAATC 62 CTCAAAACAC CTTCCTCATC GATTTTTGCT TCTTTAACCT CTCCTCGCAA CACCTTATCT 7915 |||||||||| |||||| ||| |||||||||| |||||| ||| ||||||||| ||||||||| CTCAAAACAC CTTCCTTATC GATTTTTGCT TCTTTAGCCT CTCCTCGCAT TACCTTATCT 122 CGGATCCAGA TCAGTTTCTC ATCGGTAAAC TGCTTTCCTT TAATCTTATC AAGAAAGGAA 7855 || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGAATCCAGA TCAGTTTCTC ATCGGTAAAC TGCTTTCCTT TAATCTTATC AAGAAAGGAA 182 GATCTTGCCT CCACACAGAC CAAAAATCCT CCCTTCTCAT TTACTTCTAG CCTCATAAGG 7795 |||||||||| ||||||| | ||||||| || |||||||||| ||| |||||| |||||||||| GATCTTGCCT CCACACAAGC CAAAAATTCT CCCTTCTCAT TTAATTCTAG CCTCATAAGG 242 TCATTATCCA GAGTCTGAAC CTCTCTAGCC AATGGGCGTC TAGAAACCTG CAAGTGGGCT 7735 |||||| ||| |||||||||| |||||||||| ||||||| || |||||||||| |||||| ||| TCATTAGCCA GAGTCTGAAC CTCTCTAGCC AATGGGCATC TAGAAACCTG CAAGTGAGCT 302 AGACTTCCCA TGTTCCCTGC CTTTCTACTT AAAACATCTG CCACAACATT AGCTTTTTCC 7675 |||||||||| || ||||||| |||||||||| ||| |||||| |||||||||| ||| ||| || AGACTTCCCA TGCTCCCTGC CTTTCTACTT AAAGCATCTG CCACAACATT AGCCTTTCCC 362 GGATGATACA AGATAGTGAT ATCATAGTCC TTCAGTAGTT CCATCCATCT CCTCTGTCTC 7615 |||||||||| |||||||||| |||||||||| |||||||| | ||||| |||| |||||||||| GGATGATACA AGATAGTGAT ATCATAGTCC TTCAGTAGCT CCATCGATCT CCTCTGTCTC 422 AAATTCAAAT CTTTCTGAGT AAAGATATAC TGTAAACTAC GATGATCCGT ATAGACTTCA 7555 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||| | |||||||||| AAATTCAAAT CTTTCTGAGT AAAGACATAC TGTAAACTAC GATGATCCAT ATAGACTTCA 482 CACTTAACCC CATATAGATA ATGTCTCCAT TGCTTTAATG CAAACACTAC CGCAGCCAAC 7495 |||||||||| |||| ||||| ||||||| || | |||||||| ||| |||||| || || ||| CACTTAACCC CATAGAGATA ATGTCTCTAT TACTTTAATG CAATCACTAC TGCCGCTAAC 542 TCCAAATCAT GGGTTGGATA ATTACGTTCA TGCACCTTTA ATTGC 7450 |||||||||| |||| ||||| |||||||||| |||||||||| ||||| TCCAAATCAT GGGTCGGATA ATTACGTTCA TGCACCTTTA ATTGC 587 hqPGS_C08HBa0294K15.1-_SGN-E352950+ (8034 7450) ******************************************************************************** EST sequence 145 +strand 587 n (File: SGN-E357100+) 1 CCTCTGTAAG AATAGTGTGA ATCAAATCGT CGGCACGGGG TACACATACC TTTCCCTTAA 61 TCCTCAAAAC ACCTTCCTTA TCGATTTTTG CTTCTTTAGC CTCTCCTCGC ATTACCTTAT 121 CTCGAATCCA GATCAGTTTC TCATCGGTAA ACTGCTTTCC TTTAATCTTA TCAAGAAAGG 181 AAGATCTTGC CTCCACACAA GCCAAAAATT CTCCCTTCTC ATTTAATTCT AGCCTCATAA 241 GGTCATTAGC CAGAGTCTGA ACCTCTCTAG CCAATGGGCA TCTAGAAACC TGCAAGTGAG 301 CTAGACTTCC CATGCTCCCT GCCTTTCTAC TTAAAGCATC TGCCACAACA TTAGCCTTTC 361 CCGGATGATA CAAGATAGTG ATATCATAGT CCTTCAGTAG CTCCATCGAT CTCCTCTGTC 421 TCAAATTCAA ATCTTTCTGA GTAAAGACAT ACTGTAAACT ACGATGATCC ATATAGACTT 481 CACACTTAAC CCCATAGAGA TAATGTCTCT ATTACTTTAA TGCAATCACT ACTGCCGCTA 541 ACTCCAAATC ATGGGTCGGA TAATTACGTT CATGCACCTT TAATTGC Predicted gene structure (within gDNA segment 9095 to 6840): Exon 1 8034 7450 ( 585 n); cDNA 3 587 ( 585 n); score: 0.940 MATCH C08HBa0294K15.1- SGN-E357100+ 0.940 585 0.997 C PGS_C08HBa0294K15.1-_SGN-E357100+ (8034 7450) Alignment (genomic DNA sequence = upper lines): TCTGTAAGAA CAGTGTGAAT CAAGTCATCG ACGCGGGGTA CACGTACCCT TCCCTTAATC 7975 |||||||||| ||||||||| ||| || ||| | ||||||| ||| |||| | |||||||||| TCTGTAAGAA TAGTGTGAAT CAAATCGTCG GCACGGGGTA CACATACCTT TCCCTTAATC 62 CTCAAAACAC CTTCCTCATC GATTTTTGCT TCTTTAACCT CTCCTCGCAA CACCTTATCT 7915 |||||||||| |||||| ||| |||||||||| |||||| ||| ||||||||| ||||||||| CTCAAAACAC CTTCCTTATC GATTTTTGCT TCTTTAGCCT CTCCTCGCAT TACCTTATCT 122 CGGATCCAGA TCAGTTTCTC ATCGGTAAAC TGCTTTCCTT TAATCTTATC AAGAAAGGAA 7855 || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGAATCCAGA TCAGTTTCTC ATCGGTAAAC TGCTTTCCTT TAATCTTATC AAGAAAGGAA 182 GATCTTGCCT CCACACAGAC CAAAAATCCT CCCTTCTCAT TTACTTCTAG CCTCATAAGG 7795 |||||||||| ||||||| | ||||||| || |||||||||| ||| |||||| |||||||||| GATCTTGCCT CCACACAAGC CAAAAATTCT CCCTTCTCAT TTAATTCTAG CCTCATAAGG 242 TCATTATCCA GAGTCTGAAC CTCTCTAGCC AATGGGCGTC TAGAAACCTG CAAGTGGGCT 7735 |||||| ||| |||||||||| |||||||||| ||||||| || |||||||||| |||||| ||| TCATTAGCCA GAGTCTGAAC CTCTCTAGCC AATGGGCATC TAGAAACCTG CAAGTGAGCT 302 AGACTTCCCA TGTTCCCTGC CTTTCTACTT AAAACATCTG CCACAACATT AGCTTTTTCC 7675 |||||||||| || ||||||| |||||||||| ||| |||||| |||||||||| ||| ||| || AGACTTCCCA TGCTCCCTGC CTTTCTACTT AAAGCATCTG CCACAACATT AGCCTTTCCC 362 GGATGATACA AGATAGTGAT ATCATAGTCC TTCAGTAGTT CCATCCATCT CCTCTGTCTC 7615 |||||||||| |||||||||| |||||||||| |||||||| | ||||| |||| |||||||||| GGATGATACA AGATAGTGAT ATCATAGTCC TTCAGTAGCT CCATCGATCT CCTCTGTCTC 422 AAATTCAAAT CTTTCTGAGT AAAGATATAC TGTAAACTAC GATGATCCGT ATAGACTTCA 7555 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||| | |||||||||| AAATTCAAAT CTTTCTGAGT AAAGACATAC TGTAAACTAC GATGATCCAT ATAGACTTCA 482 CACTTAACCC CATATAGATA ATGTCTCCAT TGCTTTAATG CAAACACTAC CGCAGCCAAC 7495 |||||||||| |||| ||||| ||||||| || | |||||||| ||| |||||| || || ||| CACTTAACCC CATAGAGATA ATGTCTCTAT TACTTTAATG CAATCACTAC TGCCGCTAAC 542 TCCAAATCAT GGGTTGGATA ATTACGTTCA TGCACCTTTA ATTGC 7450 |||||||||| |||| ||||| |||||||||| |||||||||| ||||| TCCAAATCAT GGGTCGGATA ATTACGTTCA TGCACCTTTA ATTGC 587 hqPGS_C08HBa0294K15.1-_SGN-E357100+ (8034 7450) ******************************************************************************** EST sequence 109 +strand 554 n (File: SGN-E352647+) 1 CCTCTGTAAG AATAGTGTGA ATCAAATCGT CGGCACGGGG TACACATACC TTTCCCTTAA 61 TCCTCAAAAC ACCTTCCTTA TCGATTTTTG CTTCTTTAGC CTCTCCTCGC ATTACCTTAT 121 CTCGAATCCA GATCAGTTTC TCATCGGTAA ACTGCTTTCC TTTAATCTTA TCAAGAAAGG 181 AAGATCTTGC CTCCACACAA GCCAAAAATT CTCCCTTCTC ATTTAATTCT AGCCTCATAA 241 GGTCATTAGC CAGAGTCTGA ACCTCTCTAG CCAATGGGCA TCTAGAAACC TGCAAGTGAG 301 CTAGACTTCC CATGCTCCCT GCCTTTCTAC TTAAAGCATC TGCCACAACA TTAGCCTTTC 361 CCGGATGATA CAAGATAGTG ATATCATAGT CCTTCAGTAG CTCCATCGAT CTCCTCTGTC 421 TCAAATTCAA ATCTTTCTGA GTAAAGACAT ACTGTAAACT ACGATGATCC ATATAGACTT 481 CACACTTAAA CCCATAGAGA TAATGGCTCT ATTACTTTAA TGCAATCACT ACTGCCGCTA 541 ACTCCAAATC ATGG Predicted gene structure (within gDNA segment 9095 to 6288): Exon 1 8034 7483 ( 552 n); cDNA 3 554 ( 552 n); score: 0.935 MATCH C08HBa0294K15.1- SGN-E352647+ 0.935 552 0.996 C PGS_C08HBa0294K15.1-_SGN-E352647+ (8034 7483) Alignment (genomic DNA sequence = upper lines): TCTGTAAGAA CAGTGTGAAT CAAGTCATCG ACGCGGGGTA CACGTACCCT TCCCTTAATC 7975 |||||||||| ||||||||| ||| || ||| | ||||||| ||| |||| | |||||||||| TCTGTAAGAA TAGTGTGAAT CAAATCGTCG GCACGGGGTA CACATACCTT TCCCTTAATC 62 CTCAAAACAC CTTCCTCATC GATTTTTGCT TCTTTAACCT CTCCTCGCAA CACCTTATCT 7915 |||||||||| |||||| ||| |||||||||| |||||| ||| ||||||||| ||||||||| CTCAAAACAC CTTCCTTATC GATTTTTGCT TCTTTAGCCT CTCCTCGCAT TACCTTATCT 122 CGGATCCAGA TCAGTTTCTC ATCGGTAAAC TGCTTTCCTT TAATCTTATC AAGAAAGGAA 7855 || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGAATCCAGA TCAGTTTCTC ATCGGTAAAC TGCTTTCCTT TAATCTTATC AAGAAAGGAA 182 GATCTTGCCT CCACACAGAC CAAAAATCCT CCCTTCTCAT TTACTTCTAG CCTCATAAGG 7795 |||||||||| ||||||| | ||||||| || |||||||||| ||| |||||| |||||||||| GATCTTGCCT CCACACAAGC CAAAAATTCT CCCTTCTCAT TTAATTCTAG CCTCATAAGG 242 TCATTATCCA GAGTCTGAAC CTCTCTAGCC AATGGGCGTC TAGAAACCTG CAAGTGGGCT 7735 |||||| ||| |||||||||| |||||||||| ||||||| || |||||||||| |||||| ||| TCATTAGCCA GAGTCTGAAC CTCTCTAGCC AATGGGCATC TAGAAACCTG CAAGTGAGCT 302 AGACTTCCCA TGTTCCCTGC CTTTCTACTT AAAACATCTG CCACAACATT AGCTTTTTCC 7675 |||||||||| || ||||||| |||||||||| ||| |||||| |||||||||| ||| ||| || AGACTTCCCA TGCTCCCTGC CTTTCTACTT AAAGCATCTG CCACAACATT AGCCTTTCCC 362 GGATGATACA AGATAGTGAT ATCATAGTCC TTCAGTAGTT CCATCCATCT CCTCTGTCTC 7615 |||||||||| |||||||||| |||||||||| |||||||| | ||||| |||| |||||||||| GGATGATACA AGATAGTGAT ATCATAGTCC TTCAGTAGCT CCATCGATCT CCTCTGTCTC 422 AAATTCAAAT CTTTCTGAGT AAAGATATAC TGTAAACTAC GATGATCCGT ATAGACTTCA 7555 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||| | |||||||||| AAATTCAAAT CTTTCTGAGT AAAGACATAC TGTAAACTAC GATGATCCAT ATAGACTTCA 482 CACTTAACCC CATATAGATA ATGTCTCCAT TGCTTTAATG CAAACACTAC CGCAGCCAAC 7495 ||||||| || |||| ||||| ||| ||| || | |||||||| ||| |||||| || || ||| CACTTAAACC CATAGAGATA ATGGCTCTAT TACTTTAATG CAATCACTAC TGCCGCTAAC 542 TCCAAATCAT GG 7483 |||||||||| || TCCAAATCAT GG 554 hqPGS_C08HBa0294K15.1-_SGN-E352647+ (8034 7483) ******************************************************************************** EST sequence 123 +strand 542 n (File: SGN-E353207+) 1 TCGGCATGTA CTGTTTTCCA AAACTTAGAA GTAAATTGCG TACCTCTATC TGATATGATG 61 GAGAGTGGAA CTCCGTGCAA TCGAACAATT TCTAAGATGT AAAGTTTGGC TAACTTCTCT 121 GCATTGTAAG TCACCTTAAC CGAAATAGAG TGAGCAGACT TAGTTAATCT GTCAACAATC 181 ACCCAAATAG AGTCATACCT ACCCATCGTC TTTGGATGAC TAACCACGAA GTCCATTGCA 241 ATTCTCTCCC ACTTCCATTC AGGAATGGGC ATTCTCTGAA GTGTCCCTCC AGGCCTCTGG 301 TGTTCATACT TTACTTGCTG ACAATTCGGG CATTGAGCAA CAAAATTAAC AATGTCACGC 361 TTCATCCTAC TCCACCAAAA ATGTTGCTTT AGGTCACGAT ACATCTTGTT TGCACCAGGA 421 TGTATAGAGT ACTTCGAACT ATGAGCCTAT ATAAGAATAG TGTGAATCAA ATCATCGACG 481 CGGGGTACAC ATACTCCTTC CCTTATTCTC AAAACACCTT CCTCATCGAT TTTTGCTTCT 541 TT Predicted gene structure (within gDNA segment 9756 to 7330): Exon 1 8481 7940 ( 542 n); cDNA 1 542 ( 542 n); score: 0.925 MATCH C08HBa0294K15.1- SGN-E353207+ 0.925 542 1.000 C PGS_C08HBa0294K15.1-_SGN-E353207+ (8481 7940) Alignment (genomic DNA sequence = upper lines): TCGGCATGCA ATATTCTCCA AAATTTAGAA GTAAACTGCG TACCTCTATC TGATATAATG 8422 |||||||| | | || |||| ||| |||||| ||||| |||| |||||||||| |||||| ||| TCGGCATGTA CTGTTTTCCA AAACTTAGAA GTAAATTGCG TACCTCTATC TGATATGATG 60 GAAAGTGGAA CTCCATGCAA TCGAACAATT TCTGAGATGT AAAGTTTGGC TAACTTCTCT 8362 || ||||||| |||| ||||| |||||||||| ||| |||||| |||||||||| |||||||||| GAGAGTGGAA CTCCGTGCAA TCGAACAATT TCTAAGATGT AAAGTTTGGC TAACTTCTCT 120 GCATTATAAG TCACCTTGAC CGGAATGAAA TGAGCAGACT TAGTTAATCT GTCAACAATT 8302 ||||| |||| ||||||| || || ||| | |||||||||| |||||||||| ||||||||| GCATTGTAAG TCACCTTAAC CGAAATAGAG TGAGCAGACT TAGTTAATCT GTCAACAATC 180 ACCCAAATGG AGTCATACTT ACCCGTTGTC TTTGGAAGAC TAACCACGAA GTCCATTGCA 8242 |||||||| | |||||||| | |||| | ||| |||||| ||| |||||||||| |||||||||| ACCCAAATAG AGTCATACCT ACCCATCGTC TTTGGATGAC TAACCACGAA GTCCATTGCA 240 ATTCTCTCCC ACTTCCATTC AGGAATGGGC ATTCTCTGAA GTGTCCCTCC AGGCCTCTGG 8182 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTCTCTCCC ACTTCCATTC AGGAATGGGC ATTCTCTGAA GTGTCCCTCC AGGCCTCTGG 300 TGTTCATACT TTACCTGCAG ACAATTCGGG CATTGAGCAA CAAAATTAAC AATGTCACGC 8122 |||||||||| |||| ||| | |||||||||| |||||||||| |||||||||| |||||||||| TGTTCATACT TTACTTGCTG ACAATTCGGG CATTGAGCAA CAAAATTAAC AATGTCACGC 360 TTCATCCTAC TTCACCAAAA ATGTTGCTTT AGATCACGAT ACATCTTGGT TGCACCAGGA 8062 |||||||||| | |||||||| |||||||||| || ||||||| |||||||| | |||||||||| TTCATCCTAC TCCACCAAAA ATGTTGCTTT AGGTCACGAT ACATCTTGTT TGCACCAGGA 420 TGTATAGAAT ACCTTGAACT ATGAGCGTCT GTAAGAACAG TGTGAATCAA GTCATCGACG 8002 |||||||| | || | ||||| |||||| | | |||||| || |||||||||| ||||||||| TGTATAGAGT ACTTCGAACT ATGAGCCTAT ATAAGAATAG TGTGAATCAA ATCATCGACG 480 CGGGGTACAC GTAC-CCTTC CCTTAATCCT CAAAACACCT TCCTCATCGA TTTTTGCTTC 7943 |||||||||| ||| ||||| |||| || || |||||||||| |||||||||| |||||||||| CGGGGTACAC ATACTCCTTC CCTT-ATTCT CAAAACACCT TCCTCATCGA TTTTTGCTTC 539 TTT 7940 ||| TTT 542 hqPGS_C08HBa0294K15.1-_SGN-E353207+ (8481 7940) ******************************************************************************** EST sequence 74 +strand 654 n (File: SGN-E578131+) 1 GTAAACTGCA TACCTCTATC TGATATGATG GAGAGTGGAA CTCCATGCAA TCGAACGATT 61 TCTGAGATAT AGATTCTGAC TAACTTCTCT ACATTGTAGG TCACCTTGAC CGGAATGCAA 121 TGAGCAGACT TAGTCAATCT GTCAACAATT ACACAAATGG AGTCATACTT ACCCATTGTC 181 TTTGGAAGGC CAACCACGAA GTCCATTGCA ATTCTCTCCC ACTTCCATTC AGGAATGGGC 241 ATTCTCTGAA GTGTCCGTCC AGGCCTTTGC TGTTCATACT TTACATGCTG ACCATTCGGT 301 TAGAAATGCT AATGGACGCT ACTTTCCCAC TAGTTCAAAA TTTGTGAAGC CACGGGCTTG 361 CTTGAAGATT GGTCTTGGTC TCTTAACAAA ACAGATCCGC TGATATGTTT CTAATTATGC 421 AGAGGATTTT GCAAGAAAGA GTTGTTAGTA GCCGGGAAGC TGAACTCAAT AGATTGAAGC 481 AGGAGAGACG AGAAAGGATC AGCCAGATAA TTCAATCAAG GAAGCAGGAG AGGGAAGCTA 541 AGAGGAAAAT GTTATTCTTT CTGCGAACTG AGGAGGAGCG TCAAAAGAGG TTACTGGAAG 601 AGGAGGAAGC CCGCAAACGT GAAGGTTCTC CTGTGGGAAG CCGGACTTGC TAAG Predicted gene structure (within gDNA segment 9141 to 3606): Exon 1 8451 8153 ( 299 n); cDNA 1 299 ( 299 n); score: 0.920 MATCH C08HBa0294K15.1- SGN-E578131+ 0.920 299 0.457 C PGS_C08HBa0294K15.1-_SGN-E578131+ (8451 8153) Alignment (genomic DNA sequence = upper lines): GTAAACTGCG TACCTCTATC TGATATAATG GAAAGTGGAA CTCCATGCAA TCGAACAATT 8392 ||||||||| |||||||||| |||||| ||| || ||||||| |||||||||| |||||| ||| GTAAACTGCA TACCTCTATC TGATATGATG GAGAGTGGAA CTCCATGCAA TCGAACGATT 60 TCTGAGATGT AAAGTTTGGC TAACTTCTCT GCATTATAAG TCACCTTGAC CGGAATGAAA 8332 |||||||| | | | | || | |||||||||| |||| || | |||||||||| ||||||| || TCTGAGATAT AGATTCTGAC TAACTTCTCT ACATTGTAGG TCACCTTGAC CGGAATGCAA 120 TGAGCAGACT TAGTTAATCT GTCAACAATT ACCCAAATGG AGTCATACTT ACCCGTTGTC 8272 |||||||||| |||| ||||| |||||||||| || ||||||| |||||||||| |||| ||||| TGAGCAGACT TAGTCAATCT GTCAACAATT ACACAAATGG AGTCATACTT ACCCATTGTC 180 TTTGGAAGAC TAACCACGAA GTCCATTGCA ATTCTCTCCC ACTTCCATTC AGGAATGGGC 8212 |||||||| | ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGGAAGGC CAACCACGAA GTCCATTGCA ATTCTCTCCC ACTTCCATTC AGGAATGGGC 240 ATTCTCTGAA GTGTCCCTCC AGGCCTCTGG TGTTCATACT TTACCTGCAG ACAATTCGG 8153 |||||||||| |||||| ||| |||||| || |||||||||| |||| ||| | || |||||| ATTCTCTGAA GTGTCCGTCC AGGCCTTTGC TGTTCATACT TTACATGCTG ACCATTCGG 299 hqPGS_C08HBa0294K15.1-_SGN-E578131+ (8451 8153) ******************************************************************************** EST sequence 47 -strand 763 n (File: SGN-E354383-) 1 AGAGAGTCGA TTTTCATATC CAAATTCAGA AATTCTAAGT ATGCTGAAAC GATGCACCTT 61 CGACGGGCCG TCGTGCCTGT GACGGTCCGT CGCAGTGCCC GTGGTCTTGG CCAGTTTTTC 121 CAGAATTAAA ATCTGCTGCT CAAAACGACT AAACAGGTCG TTACAATAGA TACCAATTTA 181 CCCATCGTTC GTCCCCGAAC GATCAAATGA AGAAAAACAA TGGCGAAAAG GAGTACCTGA 241 ATCTGTAAAC AGATGTGGGT ATTTTTCTTG CATATCTGCC TCCTTCTCCC AAGTAGCTTC 301 TTCAACCGGT CGATTCTTCC ATTGAACTTT GATGGATGCA ATTTCTCTCG ACCTCAACTT 361 GCGAACCTCT CTATCTAAAA TAGCAACTGG TTCCTCCTCA TAAGTCCAAT TCTCACCAAG 421 CGAAACTGAA TCCCAACGGA TGATGTAGTT TCCATCTCCA TGGTATCTTT TCAACATGGA 481 TACATGAAAT ACCGGATGTA CTCCGGACAG CCCTGGAGGT AAGGCTAATT CATAAGCCAC 541 CTCCCCTACT CGCTTTAGTA CCTCAAATGG TCCAATATAC CTTGGACTTA ACTTACCTCT 601 TTTACGAAAC CGCATCACCC CTTTCATTGG CGAGACTTTC AACAAGACTT GTTCGCCCTC 661 CATGAACTCT AAGTCTCTAA CCTTTCGATC TGCATATTCT TTTTGTCTAC TTTGCGCCGC 721 TAGAAGCTTT TCTTGAATAG ACTTCACTTT CTCCATCGAA TCT Predicted gene structure (within gDNA segment 11340 to 7722): Exon 1 9436 8764 ( 673 n); cDNA 81 762 ( 682 n); score: 0.832 MATCH C08HBa0294K15.1- SGN-E354383- 0.832 673 0.882 C PGS_C08HBa0294K15.1-_SGN-E354383- (9436 8764) Alignment (genomic DNA sequence = upper lines): GACGGTCCGT CGTGGTATCC ATCGACCCAG ACAGTTATTA ACAGAAATAA ACTCTACTGC 9377 |||||||||| || || || | | | | ||||| || ||||| ||| | ||| |||| GACGGTCCGT CGCAGTGCCC GTGGTCTTGG CCAGTTTTT- CCAGAATTAA AATCTGCTGC 139 TCAAAACGAC T-AACAGGTC GTTACAATAG ACACCAATTT ACCCATCGTT CGTCCTTGAA 9318 |||||||||| | |||||||| |||||||||| | |||||||| |||||||||| ||||| ||| TCAAAACGAC TAAACAGGTC GTTACAATAG ATACCAATTT ACCCATCGTT CGTCCCCGAA 199 CGATCACAAG AAGAAAAACA AGGGCGAAAA GGAGTACCTG AATCTGTAAA CAGGTGTGGG 9258 |||||| | | |||||||||| | |||||||| |||||||||| |||||||||| ||| |||||| CGATCAAATG AAGAAAAACA ATGGCGAAAA GGAGTACCTG AATCTGTAAA CAGATGTGGG 259 TATTTTTCTT GCATATCAGC CTCCTTCTCC CAAGTGGACT CTTCAATTGG TCGATTCTTT 9198 |||||||||| ||||||| || |||||||||| ||||| | | |||||| || ||||||||| TATTTTTCTT GCATATCTGC CTCCTTCTCC CAAGTAGCTT CTTCAACCGG TCGATTCTTC 319 CATTGAACCT TGATGGATGC AATCTCCCTT GACCTCAGCT TGCGTACTTC TCTATCTAAG 9138 |||||||| | |||||||||| ||| || || ||||||| || |||| || || ||||||||| CATTGAACTT TGATGGATGC AATTTCTCTC GACCTCAACT TGCGAACCTC TCTATCTAAA 379 ATAGCAACAG GCTCCTCCTC ATAAGACAAA TTCTCATCAA GAAGAACTGA ATCCCAACGA 9078 |||||||| | | |||||||| ||||| | || |||||| ||| | |||||| ||||||||| ATAGCAACTG GTTCCTCCTC ATAAGTCCAA TTCTCACCAA GCGAAACTGA ATCCCAACGG 439 ATGATGTAGT TTCCATCCCC ATGGTATCTT TTCAACATAG ACACATGAAA TACCGGGTGC 9018 |||||||||| ||||||| || |||||||||| |||||||| | | |||||||| |||||| || ATGATGTAGT TTCCATCTCC ATGGTATCTT TTCAACATGG ATACATGAAA TACCGGATGT 499 AATCCTGACA GTCCTGGGGG CAAGGCTAAT TCATACGCTA CCTCCCCCAC GCGCTTCAGA 8958 | ||| |||| | ||||| || ||||||||| ||||| || | ||||||| || ||||| || ACTCCGGACA GCCCTGGAGG TAAGGCTAAT TCATAAGCCA CCTCCCCTAC TCGCTTTAGT 559 ACTTCAAATG GACCAATATA CCTCGGAC-T -A---A--GC --TTACCAAA CCGCATCACC 8907 || ||||||| | |||||||| ||| |||| | | | | |||| ||| |||||||||| ACCTCAAATG GTCCAATATA CCTTGGACTT AACTTACCTC TTTTACGAAA CCGCATCACC 619 CCTTTCATGG GTGAAACCTT CAGCAAAACT TGCTCACCCT CCATAAACTC CAAGTCTCTA 8847 |||||||| | | || || || || ||| ||| || || |||| |||| ||||| ||||||||| CCTTTCATTG GCGAGACTTT CAACAAGACT TGTTCGCCCT CCATGAACTC TAAGTCTCTA 679 ACCTTTCGAT CTGCATATTC TTTTTGTCTA CTTTGAGCCG CTAAAAGCTT TTCTTGAATG 8787 |||||||||| |||||||||| |||||||||| ||||| |||| ||| |||||| ||||||||| ACCTTTCGAT CTGCATATTC TTTTTGTCTA CTTTGCGCCG CTAGAAGCTT TTCTTGAATA 739 CATTTCACTT TATCTAGCGA TTC 8764 | ||||||| | || | ||| || GACTTCACTT TCTCCATCGA ATC 762 hqPGS_C08HBa0294K15.1-_SGN-E354383- (9436 8764) ******************************************************************************** EST sequence 16 -strand 542 n (File: SGN-E252199-) 1 CGACCCAGCC TGGGATTACG CAGTCTGTGA CGGTCCGTCC TGCACGTCCG TCACAGAGTT 61 CAGAGACTAG ATTTTTACCA AGGGTCTGTG ACGGCCCATC ACGCCTGTGA CGGTCCGTCC 121 TGCCATTCCG TCACGAAGTT CAGAGAGTCG ATTTCAGTAC CCAAATTTCA GAATTCTAAG 181 TGTTTTGGAA CGAGACCCCC TCGACGGTCC GTCGTGGGAT CCGTCGTCTC AGTCAGTTTT 241 TCCAGAAATA AAATCTGTTA CTCAAAACGA CTAAACAGGT CGTTACAATA GATACCAATT 301 TACCCATCGT TCGTCCCCGA ACGATCACAA GAAGAAAAAC AAGGGCGAAA AGGAGTACCT 361 GAATCTGTAA ACAGGTATGG GTATCTTTCT CGCATATCAA CTTCCTTCTC CCAAGTGGAT 421 TCTTCAACTG GTCGATTCTT CCATTGAACT TTGATAGATG CAATCTCCCT TGACCTCAAT 481 TTGCGGACTT CTCTATCTAA AATGGCAACA GGCTCCTCCT CATAAGACAA ATTCTCATCA 541 AG Predicted gene structure (within gDNA segment 11823 to 8497): Exon 1 9581 9097 ( 485 n); cDNA 59 542 ( 484 n); score: 0.872 MATCH C08HBa0294K15.1- SGN-E252199- 0.872 485 0.895 C PGS_C08HBa0294K15.1-_SGN-E252199- (9581 9097) Alignment (genomic DNA sequence = upper lines): TTTAGAGACT CAATTTTTAT TTAAGACCAT GTGACGGTCC GTCGTGCCTA CGACGGTCCG 9522 || ||||||| ||||||| ||| | ||||||| || || |||| ||||||||| TTCAGAGACT AGATTTTTA- CCAAGGGTCT GTGACGGCCC ATCACGCCTG TGACGGTCCG 117 TCCTGCTCTT CCATTGCGAA GTTCAGAGAG TTGTTCTCAG TACCCAATTT TTCAGAA-AC 9463 |||||| || || | |||| |||||||||| | | | |||| ||||||| | ||||||| | TCCTGCCATT CCGTCACGAA GTTCAGAGAG TCGATTTCAG TACCCAA-AT TTCAGAATTC 176 TAAGTGTTTT GGAACGAGAC CCCCTCGACG GTCCGTCGTG GTATCCATCG ACCCAGACAG 9403 |||||||||| |||||||||| |||||||||| |||||||||| | |||| ||| | ||| ||| TAAGTGTTTT GGAACGAGAC CCCCTCGACG GTCCGTCGTG GGATCCGTCG TCTCAGTCAG 236 TTATTAACAG AAATAAACTC TACTGCTCAA AACGACT-AA CAGGTCGTTA CAATAGACAC 9344 || || ||| ||||||| || | | ||||| ||||||| || |||||||||| ||||||| || TT-TTTCCAG AAATAAAATC TGTTACTCAA AACGACTAAA CAGGTCGTTA CAATAGATAC 295 CAATTTACCC ATCGTTCGTC CTTGAACGAT CACAAGAAGA AAAACAAGGG CGAAAAGGAG 9284 |||||||||| |||||||||| | ||||||| |||||||||| |||||||||| |||||||||| CAATTTACCC ATCGTTCGTC CCCGAACGAT CACAAGAAGA AAAACAAGGG CGAAAAGGAG 355 TACCTGAATC TGTAAACAGG TGTGGGTATT TTTCTTGCAT ATCAGCCTCC TTCTCCCAAG 9224 |||||||||| |||||||||| | ||||||| ||||| |||| |||| | ||| |||||||||| TACCTGAATC TGTAAACAGG TATGGGTATC TTTCTCGCAT ATCAACTTCC TTCTCCCAAG 415 TGGACTCTTC AATTGGTCGA TTCTTTCATT GAACCTTGAT GGATGCAATC TCCCTTGACC 9164 |||| ||||| || ||||||| ||||| |||| |||| ||||| ||||||||| |||||||||| TGGATTCTTC AACTGGTCGA TTCTTCCATT GAACTTTGAT AGATGCAATC TCCCTTGACC 475 TCAGCTTGCG TACTTCTCTA TCTAAGATAG CAACAGGCTC CTCCTCATAA GACAAATTCT 9104 ||| ||||| ||||||||| ||||| || | |||||||||| |||||||||| |||||||||| TCAATTTGCG GACTTCTCTA TCTAAAATGG CAACAGGCTC CTCCTCATAA GACAAATTCT 535 CATCAAG 9097 ||||||| CATCAAG 542 hqPGS_C08HBa0294K15.1-_SGN-E252199- (9581 9097) ******************************************************************************** EST sequence 28 -strand 390 n (File: SGN-E242274-) 1 AATTAATTCA AGGTTATCTC CTTCAACCCC CCAAGTAATT GAATTATTAA CATTAAACCA 61 CTAATTTCAT AATTATAAGC AGGAATAGTC CAAAACGCCC CTTAAAACAT TTAACAAAAA 121 TCCGACCCAG TCAGGGTTAC GCAGTCTGTG ACGACCAGTC GTGCCTGCGA CGGTCCGTCC 181 TGCTGCTTCC GTCACAAAGT TCAGAGATTA AATTTCACTA AGGGTTTGTG ACAGCCCGTC 241 ATGCCTGTGA CGGTCCGTCG TGCCATTTCG TCGCGAAGTT CAGAGAGTCG ATCTCAGTAC 301 CCAAATTTCA GAATTCTAAG TGTTTTGGAA CGAGACACCC TCCACGGTCC GTCGTGCTCA 361 TGACGGTCCG TCGTGGGATC CGTCGACTCA Predicted gene structure (within gDNA segment 11441 to 6854): Exon 1 9776 9423 ( 354 n); cDNA 3 356 ( 354 n); score: 0.831 MATCH C08HBa0294K15.1- SGN-E242274- 0.831 354 0.908 C PGS_C08HBa0294K15.1-_SGN-E242274- (9776 9423) Alignment (genomic DNA sequence = upper lines): TTATTCCAAG GTTGTCTCCT TTAAC-CCCC AAGAAATTGA ATTATTAACA TTAAACCACT 9718 ||| | |||| ||| |||||| | ||| |||| ||| |||||| |||||||||| |||||||||| TTAATTCAAG GTTATCTCCT TCAACCCCCC AAGTAATTGA ATTATTAACA TTAAACCACT 62 AACTTTATAA TCATAAGCAG GAATAATCCA AAACACCCCT TAAAAACTTT TAACAGAAAT 9658 || || |||| | |||||||| ||||| |||| |||| ||||| | ||||| || ||||| |||| AATTTCATAA TTATAAGCAG GAATAGTCCA AAACGCCCCT T-AAAACATT TAACAAAAAT 121 CCGACCCAGT CAGGGTTACG CAGTCTGTGA CGGTCCTTCG TGCCTGCGAC GGT-CGTCCT 9599 |||||||||| |||||||||| |||||||||| || | ||| |||||||||| ||| |||||| CCGACCCAGT CAGGGTTACG CAGTCTGTGA CGACCAGTCG TGCCTGCGAC GGTCCGTCCT 181 GCTAAGT-CG TCACAGAGTT TAGAGACTCA ATTTTTATTT AAGACCATGT GACGGTCCGT 9540 ||| | || ||||| |||| ||||| | | | ||| | | ||| ||| ||| | |||| GCTGCTTCCG TCACAAAGTT CAGAGA-TTA AATTTCA-CT AAGGGTTTGT GACAGCCCGT 239 CGTGCCTACG ACGGTCCGTC CTGCTCTTCC ATTGCGAAGT TCAGAGAGTT GTTCTCAGTA 9480 | ||||| | |||||||||| ||| || | | ||||||| ||||||||| | |||||||| CATGCCTGTG ACGGTCCGTC GTGCCATTTC GTCGCGAAGT TCAGAGAGTC GATCTCAGTA 299 CCCAATTTTT CAGAA-ACTA AGTGTTTTGG AACGAGACCC CCTCGACGGT CCGTCGTG 9423 ||||| ||| ||||| ||| |||||||||| |||||||| | |||| ||||| |||||||| CCCAA-ATTT CAGAATTCTA AGTGTTTTGG AACGAGACAC CCTCCACGGT CCGTCGTG 356 hqPGS_C08HBa0294K15.1-_SGN-E242274- (9776 9423) ******************************************************************************** EST sequence 112 +strand 686 n (File: SGN-E241789+) 1 ATGTCTGATC TTCAAGGACA TCAAGACATG AATGAGAGAG AATCCAGTCC GAGCTAGGAA 61 CAATAGCTCA CCCTGAAATC TGACGTGATG AAGACTGGTT AGAGTTGCGG TTGAGTTGAA 121 GACGACGGTA CGTTTGCTGC ACTCCACAAT TAACAAAAAG AAAACATAAA AGTAGGGGTC 181 AGTACAAACA CGAGTACTGA GTAGATATCA TCGGCCAACT CAGAATAGAG AACAATATAT 241 ATCAAATAAT AAAATAAAAT CAACCATAAC ACTTAACAGG TGACAACAAC AAGTACCATA 301 ACCATTGGGC ACAACCCAAG AACATCTATG AGGACTCAAG CCTCCACACC ATACTCATTT 361 GGGAAACAGG TTCATTAAAT TGAGTACATT AACATAATTC AAGATTCATT CTTTTTACTA 421 TCGTGGTGTC GGAACGTGAT ACTCCGATCC CCTAATGCTA CGTGTCGGTT CGTGACACCC 481 GATCCCCTAA TACTACGTGT CGGTTCGTTA CACCCGATCT CCTAATACTA CGTGCCGATT 541 CGTGACACCC GATCCATTAA TACTATGTGT CGGTTCGTGA CACCCGATCC ATTAATACTA 601 CGTGTCGGTT CGTGACACCC GATCCCCTAA CCTCATTCTT TTAGTTCATC AAGCCTTCTT 661 TTATACCAAG ACATCATCAT TAACAA Predicted gene structure (within gDNA segment 11804 to 7187): Exon 1 10859 10434 ( 426 n); cDNA 1 425 ( 425 n); score: 0.886 Intron 1 10433 10399 ( 35 n); Pd: 0.000 (s: 0.92), Pa: 0.000 (s: 0.78) Exon 2 10398 10136 ( 263 n); cDNA 426 686 ( 261 n); score: 0.751 MATCH C08HBa0294K15.1- SGN-E241789+ 0.835 689 1.004 C PGS_C08HBa0294K15.1-_SGN-E241789+ (10859 10434,10398 10136) Alignment (genomic DNA sequence = upper lines): ATGTCCGAAC TTCAA-GACA TCAAGACCTG AA--AGAAAG AATCCAGTCC GAGCTAGGAA 10803 ||||| || | ||||| |||| ||||||| || || ||| || |||||||||| |||||||||| ATGTCTGATC TTCAAGGACA TCAAGACATG AATGAGAGAG AATCCAGTCC GAGCTAGGAA 60 CAATAGCTCA CCCTGAAATC TGATTATGCT GAAGTCTGGC TAGAGTTGTG GTTGAGTCGA 10743 |||||||||| |||||||||| ||| || | |||| |||| |||||||| | ||||||| || CAATAGCTCA CCCTGAAATC TGA-CGTGAT GAAGACTGGT TAGAGTTGCG GTTGAGTTGA 119 AGTTGTTGGC ACGTTTGTTG CACTCCACAA ATAACAAAGA AAGAAACATA CAAGTAGGGG 10683 || | || ||||||| || |||||||||| ||||||| | | ||||||| ||||||||| AGACGACGGT ACGTTTGCTG CACTCCACAA TTAACAAA-A AGAAAACATA AAAGTAGGGG 178 TCAGTACAAG GCACAAGTAC TGAGTAGGTA TCATCGGCCA ACTCAAAATA GAAAACAATA 10623 ||||||||| ||| ||||| ||||||| || |||||||||| ||||| |||| || ||||||| TCAGTACAA- ACACGAGTAC TGAGTAGATA TCATCGGCCA ACTCAGAATA GAGAACAATA 237 TACATCAGAT AATAACATAA AATCAACTAC AATACTCAAC AGGTGACAAC AACAAGTACC 10563 || |||| || ||||| |||| ||||||| | || ||| ||| |||||||||| |||||||||| TATATCAAAT AATAAAATAA AATCAACCAT AACACTTAAC AGGTGACAAC AACAAGTACC 297 ATAACCATTG GGCACAACCC AAGCACATCT ATGAGGACTC AAGCCTCCAC ACCATACTCA 10503 |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| ATAACCATTG GGCACAACCC AAGAACATCT ATGAGGACTC AAGCCTCCAC ACCATACTCA 357 TTTGGGAAAC AGGTTCATTA AATTTGAGTA TATTAGCATA ATTCAAGATT CATTCTTTTT 10443 |||||||||| |||||||||| || ||||||| |||| |||| |||||||||| |||||||||| TTTGGGAAAC AGGTTCATTA AA-TTGAGTA CATTAACATA ATTCAAGATT CATTCTTTTT 416 ACTATCCTGG TGTCAAAACG TGACACCCGA TCCATACTAT CCTGGTGTCG GAACGTGACA 10383 |||||| || |||||| |||||||| | ACTATCGTG. .......... .......... .......... ....GTGTCG GAACGTGATA 441 CTCTGATCCT CTACTATCCT GGTGTCGGAA CGTGATACTC GAT-CCATAC TATCCTGGTG 10324 ||| ||||| ||| | | ||||||| ||||| || | ||| || || || | ||| CTCCGATCCC CTAAT-GCTA CGTGTCGGTT CGTGACACCC GATCCCCTAA TA-CTACGTG 499 TC-GAACGTG ACACCCGATC -CATACTATC CTGGTGTCGG AACGTGACAC CCGATCCA-T 10267 || | ||| |||||||||| | || || | ||| || |||||||| |||||||| | TCGGTTCGTT ACACCCGATC TCCTAATA-C TACGTGCCGA TTCGTGACAC CCGATCCATT 558 ACTATCCTGG TGTCGGAACG TGACACCCGA TCCA-TACTA TCCTGGTGTC GGAATGTGAC 10208 | || | | |||||| || |||||||||| |||| || || | ||||| || ||||| AATA-CTATG TGTCGGTTCG TGACACCCGA TCCATTAATA -CTACGTGTC GGTTCGTGAC 616 ACTCCGATCC CCTAATTCTC ATTCTTTCAG TTCATCAAGC CTTCTTTTAT ACCAAGGTAT 10148 || ||||||| ||||| ||| ||||||| || |||||||||| |||||||||| |||||| || AC-CCGATCC CCTAA-CCTC ATTCTTTTAG TTCATCAAGC CTTCTTTTAT ACCAAGACAT 674 CATCATTAAC AA 10136 |||||||||| || CATCATTAAC AA 686 hqPGS_C08HBa0294K15.1-_SGN-E241789+ (10859 10434,10398 10136) ******************************************************************************** EST sequence 158 +strand 730 n (File: SGN-E546506+) 1 TTTTTTTTTT TTTTTTTTAA TAAAAACAAT TCAATACTAT TATTATTATC CCCAAAATCT 61 GGAAGTCATC ATCACAAGAA CATCTATCTC AAATTACTTA ACTAGGAATG TCTAAGAACA 121 AAATAACTAA AAAGCTAGTC CATGCCGGAA ATTCAAGGCA TCAAGACTTG AAGAAGAAGA 181 CCCAGTCCAA GCTAGACGCA TTAGCTCACC CTGAATTTTC CGATGAAGTG AAGACTGGCT 241 AGATCTACTG TTGAGTTGAA GTTGACGGAA CGTTTGCTGC ATTACACAAA TAACAAAGAG 301 GAAAACATGA AAGTAGGGGT CAGTACAACC ACACGTACTG AGTAGATATC ATCGGCCAAC 361 TCAAAATAGG GAACAGTATA TATCAATAAT AATGTAAATC AACTACAATA CTCAACATGT 421 AGCAATAACA CCATGAATTC ATCAATAACT ACAACCGAGT TCACACATGA GGACTCAAGC 481 CTCAATACCA TACTCATTTG GGAATTAAGT TCATTAGATT GAGTATATTC ATTATCTTTC 541 AAGATTCATT ATCTTTCTTC CTCTTGTGTC GGTACGTGAC ACTCCGATCC TCTATTTCTA 601 TCCTGGTGCC GGAACGTGGC ACTCCGATCC TCATTCTATC CTGGTACCGG AACGTGGCAC 661 CCGATCCATT TTCTATCCTG GTGTCGGAAC GTGACACTCC GATCCTCATA TTCTATCCTG 721 GTACCGGAAC Predicted gene structure (within gDNA segment 12001 to 7625): Exon 1 10966 10435 ( 532 n); cDNA 40 562 ( 523 n); score: 0.788 Intron 1 10434 10402 ( 33 n); Pd: 0.000 (s: 0.74), Pa: 0.000 (s: 0) Exon 2 10401 10368 ( 34 n); cDNA 563 596 ( 34 n); score: 0.882 Intron 2 10367 10302 ( 66 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.73) Exon 3 10301 10183 ( 119 n); cDNA 597 719 ( 123 n); score: 0.777 PPA cDNA 18 1 MATCH C08HBa0294K15.1- SGN-E546506+ 0.786 685 0.938 C PGS_C08HBa0294K15.1-_SGN-E546506+ (10966 10435,10401 10368,10301 10183) Alignment (genomic DNA sequence = upper lines): TTATCATTAT CCCCAAAATC TGGAAGTCAT CATCACAAGA ACATCTATCC TCAAATTACT 10907 |||| ||||| |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| TTATTATTAT CCCCAAAATC TGGAAGTCAT CATCACAAGA ACATCTAT-C TCAAATTACT 98 AAATCTAAGA GTATCTAAGA AGCTAAAATA AATAAAAGAG ATGGTCCATG TCCGAACTTC 10847 || ||| || | ||||||| | | |||||| | ||||| || | ||||||| | ||| ||| TAA-CTAGGA ATGTCTAAGA A-C-AAAATA ACTAAAA-AG CTAGTCCATG CCGGAAATTC 154 AAGACATCAA GACCTGAAAG AAAGAATCCA GTCCGAGCTA GGAACAATAG CTCACCCTGA 10787 ||| |||||| ||| |||| | | | ||| |||| ||||| | || ||| |||||||||| AAGGCATCAA GACTTGAAGA AGAAGACCCA GTCCAAGCTA GACGCATTAG CTCACCCTGA 214 A--ATCTGAT TATGCTGAAG TCTGGCTAGA GTTGTGGTTG AGTCGAAGTT GTTGGCACGT 10729 | || ||| | | ||||| ||||||||| | |||| ||| |||||| | || |||| ATTTTCCGAT GAAG-TGAAG ACTGGCTAGA TCTACTGTTG AGTTGAAGTT GACGGAACGT 273 TTGTTGCACT CCACAAATAA CAAAGAAAGA AACATACAAG TAGGGGTCAG TACAAGGCAC 10669 ||| |||| | ||||||||| |||||| | ||||| ||| |||||||||| ||||| ||| TTGCTGCATT ACACAAATAA CAAAGAGGAA AACATGAAAG TAGGGGTCAG TACAA-CCAC 332 AAGTACTGAG TAGGTATCAT CGGCCAACTC AAAATAGAAA ACAATATACA TCAGATAATA 10609 | |||||||| ||| |||||| |||||||||| ||||||| | ||| |||| | ||| |||||| ACGTACTGAG TAGATATCAT CGGCCAACTC AAAATAGGGA ACAGTATATA TCA-ATAATA 391 ACATAAAATC AACTACAATA CTCAACAGGT GACAACAACA -AGTACCATA ACCATTGGGC 10550 | | ||||| |||||||||| ||||||| || ||| |||| | | | || | ATGT-AAATC AACTACAATA CTCAACATGT AGCAATAACA CCATGAATTC ATCAATAACT 450 ACAACCCAAG CACATCTATG AGGACTCAAG CCTCCACACC ATACTCATTT GGGAAACAGG 10490 |||| || || || ||| |||||||||| |||| | ||| |||||||||| ||||| | | ACAA-CCGAG TTCACACATG AGGACTCAAG CCTCAATACC ATACTCATTT GGGAATTAAG 509 TTCATTAAAT TTGAGTATAT T-AGCATAAT TCAAGATTCA TTCTTTTTAC TATCCTGGTG 10431 ||||||| | |||||||||| | | || | |||||||||| || | ||| | | |||| TTCATTAGA- TTGAGTATAT TCATTATCTT TCAAGATTCA TTATCTTT-C T-TCCT.... 562 TCAAAACGTG ACACCCGATC CATACTATCC TGGTGTCGGA ACGTGACACT CTGATCCTCT 10371 | | ||||||| |||||||||| | |||||||| .......... .......... .........C TTGTGTCGGT ACGTGACACT CCGATCCTCT 593 ACTATCCTGG TGTCGGAACG TGATACTCGA TCCATACTAT CCTGGTGTCG AACGTGACAC 10311 | | ATT....... .......... .......... .......... .......... .......... 596 CCGATCCATA CTATCCTGGT GTCGGAACGT GACAC-CCGA T-C-CATACT ATCCTGGTGT 10254 |||||||||| | |||||||| | ||| |||| | | ||| || |||||||| .........T CTATCCTGGT GCCGGAACGT GGCACTCCGA TCCTCATTCT ATCCTGGTAC 647 CGGAACGTGA CACCCGATCC A--TACTATC CTGGTGTCGG AATGTGACAC TCCGATCCCC 10196 ||||||||| |||||||||| | | ||||| |||||||||| || ||||||| |||||||| | CGGAACGTGG CACCCGATCC ATTTTCTATC CTGGTGTCGG AACGTGACAC TCCGATCCTC 707 TAATTCTCAT TCT 10183 ||||| || || ATATTCT-AT CCT 719 hqPGS_C08HBa0294K15.1-_SGN-E546506+ (10966 10435,10401 10368,10301 10183) ******************************************************************************** EST sequence 3 -strand 605 n (File: SGN-E347579-) 1 ATCCCCTAAT TCTACGTGTC GGTTCGTGAC ACCCGATCCC CTAATTCTAC GTGTCGGTTC 61 GTGACACCTG ATCCCCTAAT CTACGTGCCG GTTCGTGACA CCCGATCCCC TAATTCTACG 121 TGCCAGTTCG TGACACCCGA TCCCCTAATT CTACGTGTCG GTTCGTGACA CCCGATCCCC 181 TGCATGTGTC GGTACGTGAC ACTCCGATCC ACTAATATCA TTCTGTAAAT CATCAGGCCT 241 TCTCTATACC AAGGCATCAT CAATCCCATT ACTTTTATTC ATCAAGCCTT CTTCTATACC 301 AAGGCATCAT CATTAATAAG AGATTAGATT TTTATCAAGA TTTGGGATTC AATAACTTCA 361 TCATGCTTAA TATAATCACA ATTATATAAT CACGTTCATG CATGCATACA ATTAAGCATA 421 TAGCAGGGTT TACAATACTA CCAATACATA TCATTCTCTA TTAAGAGTTT ACTATGAAAG 481 CATGAAAACC ATAACCTACC TCCACCGAAG ATTAGTGATC AAGCAAGCAA ATTTTTCTCC 541 AAGCTTTGTT TCTCCCTTCT CGTTCGATTC TTCCTCTCTC TCTTGTTCTT TCTATTTTCT 601 TTATT Predicted gene structure (within gDNA segment 14439 to 8418): Exon 1 10438 9947 ( 492 n); cDNA 11 521 ( 511 n); score: 0.645 MATCH C08HBa0294K15.1- SGN-E347579- 0.645 492 0.813 C PGS_C08HBa0294K15.1-_SGN-E347579- (10438 9947) Alignment (genomic DNA sequence = upper lines): TCCTGGTGTC AAAACGTGAC ACCCGATCCA TACTATCCTG GTGTCGGAAC GTGACACTCT 10379 || ||||| |||||| ||||||||| || ||||||| | ||||||| || TCTACGTGTC GGTTCGTGAC ACCCGATCCC CTAATTCTAC GTGTCGGTTC GTGACAC-CT 69 GATCCTCTAC TATCCTGGTG TCGGAACGTG ATACTCGATC CA-TACTATC CTGGTGTC-G 10321 ||||| ||| | | | ||| ||| |||| | || ||||| | || | || ||| | | GATCCCCTAA TCTAC--GTG CCGGTTCGTG ACACCCGATC CCCTAAT-TC TACGTGCCAG 126 AACGTGACAC CCGAT-CCAT ACTATCCTGG TGTCGGAACG TGACACCCGA TCCATACTAT 10262 |||||||| ||||| || | | | || | |||||| || |||||||||| ||| || TTCGTGACAC CCGATCCCCT AAT-TCTACG TGTCGGTTCG TGACACCCGA TCC--CCT-G 182 CCTGGTGTCG GAACGTGACA C-CCGATCCA -TACTATCCT GGTGT-CGGA ATGTGACACT 10205 | | |||||| | |||||||| | |||||||| || |||| | ||| || | | | CAT-GTGTCG GTACGTGACA CTCCGATCCA CTAATATCAT TCTGTAAATC ATCAGGCCTT 241 C-CGAT-CC- ---C--C-TA ATTCTCATT- CTTTCAGTTC ATCAAGCCTT CTTTTATACC 10155 | | || || | | | | || |||| |||| | ||| |||||||||| ||| |||||| CTCTATACCA AGGCATCATC AATCCCATTA CTTTTA-TTC ATCAAGCCTT CTTCTATACC 300 AAGGTATCAT CATTAACAA- AG---AG-G- TTT-T-AAGG TTTAAGATTC AACAGCCTCA 10103 |||| ||||| |||||| || || || ||| | ||| ||| ||||| || | | ||| AAGGCATCAT CATTAATAAG AGATTAGATT TTTATCAAGA TTTGGGATTC AATAACTTCA 360 TCATGCTT-A TTTTATCACA ATTATATAAT CACG-TCATG CAAGCACACA ATTAAGCATA 10045 |||||||| | | | |||||| |||||||||| |||| ||||| || ||| ||| |||||||||| TCATGCTTAA TATAATCACA ATTATATAAT CACGTTCATG CATGCATACA ATTAAGCATA 420 TAGAAGACTT TACAATACTA CCCAACACAT ATCATTCGCT ATTAAGAGTT TACTAT---A 9988 ||| || || |||||||||| |||| |||| ||||||| || |||||||||| |||||| | TAGCAGGGTT TACAATACTA -CCAATACAT ATCATTCTCT ATTAAGAGTT TACTATGAAA 479 GCAT--AATC CATAACCTAC CTCCACCGAA GAATTCGTGA TCA 9947 |||| || | |||||||||| |||||||||| | ||| |||| ||| GCATGAAAAC CATAACCTAC CTCCACCGAA G-ATTAGTGA TCA 521 hqPGS_C08HBa0294K15.1-_SGN-E347579- (10438 9947) ******************************************************************************** EST sequence 32 -strand 515 n (File: SGN-E242359-) 1 AGTATGTATT AAGCAATATC ATAAAATTAA CTAATATCCT TAGCATGCAG CATTTGCAAT 61 TACCATAACC CTTGGTTGCA TCACCAAGCA CATCAATGAG GACTCACACC TCCTCATCAT 121 ACTTATTTGG GAATTTAGTT CATTGGATTG CATATATTAA CATATTTCAA GATTCATCAT 181 ATTTATTCCC CTCGTGTCCT TACGTGACAC TCCACTCCTC AATATACTAT CCTGGCACCG 241 GAACGTGGCA CCCGATCCAT ATTCTATCCT GGTGTCAGAA CGTGACACCC GATCCATATT 301 CTATCCTGGT GTCGGAACGT GACACCCGAT CCATATTCTA TCCTGGTACC GGAACGTGGC 361 ACCCGATCCA TATTCTATCC TGGTGTCGGA ACGTGACACC CGATCCATAT TCTATCCTGG 421 TACCGGAACG TGGCACCCGA TCCCCTAATC TCACCACTTT CGTTCATCAA GCCTTCTTTT 481 ATACCAAGGC ATCATTATTA ACAAAGTAGA TTAGG Predicted gene structure (within gDNA segment 13701 to 7812): Exon 1 10624 10132 ( 493 n); cDNA 3 508 ( 506 n); score: 0.739 Intron 1 10131 9698 ( 434 n); Pd: 0.560 (s: 0.88), Pa: 0.737 (s: 0) Exon 2 9697 9693 ( 5 n); cDNA 509 513 ( 5 n); score: 0.800 MATCH C08HBa0294K15.1- SGN-E242359- 0.739 498 0.967 C PGS_C08HBa0294K15.1-_SGN-E242359- (10624 10132,9697 9693) Alignment (genomic DNA sequence = upper lines): TATACATCAG ATAATAACAT AAAATCAACT ACAATACTCA ACAGGTGACA ACAACAAGTA 10565 ||| || | |||| ||| ||||| |||| | || || | || | || ||| || TATGTATTAA GCAATATCAT AAAATTAACT AATATCCTTA GCATGCAGCA TTTGCAATTA 62 CCATAACCAT TGGGCACAAC -CCAAGCACA TCTATGAGGA CTCAAGCCTC CACACCATAC 10506 |||||||| | ||| || | ||||||||| || ||||||| |||| |||| | || ||||| CCATAACCCT TGGTTGCATC ACCAAGCACA TCAATGAGGA CTCACACCTC CTCATCATAC 122 TCATTTGGGA AACAGGTTCA TTAAATTTGA GTATATTAGC ATAATTCAAG ATTCATTCTT 10446 | |||||||| | ||||| || | ||| ||||||| | ||| |||||| |||||| | TTATTTGGGA ATTTAGTTCA TTGGA-TTGC ATATATTAAC ATATTTCAAG ATTCATCATA 181 TTTACTATCC TGGTGTCAAA ACGTGACAC- CCGAT-C-C- --ATACTATC CTGGTGTCGG 10392 |||| | || | ||||| ||||||||| || | | | |||||||| |||| ||| TTTATTCCCC TCGTGTCCTT ACGTGACACT CCACTCCTCA ATATACTATC CTGGCACCGG 241 AACGTGACAC TCTGATCC-T CTACTATCCT GGTGTCGGAA CGTGATACTC GATCCATA-- 10335 |||||| ||| | ||||| | | ||||||| |||||| ||| ||||| || | |||||||| AACGTGGCAC -CCGATCCAT ATTCTATCCT GGTGTCAGAA CGTGACACCC GATCCATATT 300 CTATCCTGGT GTC-GAACGT GACACCCGAT CCATA--CTA TCCTGGTGTC GGAACGTGAC 10278 |||||||||| ||| |||||| |||||||||| ||||| ||| ||||||| | |||||||| | CTATCCTGGT GTCGGAACGT GACACCCGAT CCATATTCTA TCCTGGTACC GGAACGTGGC 360 ACCCGATCCA TA--CTATCC TGGTGTCGGA ACGTGACACC CGATCCATA- -CTATCCTGG 10222 |||||||||| || |||||| |||||||||| |||||||||| ||||||||| ||||||||| ACCCGATCCA TATTCTATCC TGGTGTCGGA ACGTGACACC CGATCCATAT TCTATCCTGG 420 TGTCGGAATG TGACACTCCG ATCCCCTAAT TCTCATTCTT TCAGTTCATC AAGCCTTCTT 10162 | ||||| | || ||| ||| ||||||||| ||||| | | ||||||| |||||||||| TACCGGAACG TGGCAC-CCG ATCCCCTAA- TCTCACCACT TTCGTTCATC AAGCCTTCTT 478 TTATACCAAG GTATCATCAT TAACAAAGAG GTTTTAAGGT TTAAGATTCA ACAGCCTCAT 10102 |||||||||| | ||||| || |||||||| TTATACCAAG GCATCATTAT TAACAAAGTA .......... .......... .......... 508 CATGCTTATT TTATCACAAT TATATAATCA CGTCATGCAA GCACACAATT AAGCATATAG 10042 .......... .......... .......... .......... .......... .......... 508 AAGACTTTAC AATACTACCC AACACATATC ATTCGCTATT AAGAGTTTAC TATAGCATAA 9982 .......... .......... .......... .......... .......... .......... 508 TCCATAACCT ACCTCCACCG AAGAATTCGT GATCACGCAA GCTACTCCTC AAGGTCTTTG 9922 .......... .......... .......... .......... .......... .......... 508 CTTTCCTCTT CGTTCTTCTC TCCCTCTCGC TCGTTCTCCC TTCTTTTTCT TTTTCTTTTT 9862 .......... .......... .......... .......... .......... .......... 508 TAATTTTCTC CTCTTTCAAA ATCCCTTTGT TTTACCTTAA TTACCATATA ATTAAGTATA 9802 .......... .......... .......... .......... .......... .......... 508 AAAGATGCTA AAAGTAACCC ATTACTTATT CCAAGGTTGT CTCCTTTAAC CCCCAAGAAA 9742 .......... .......... .......... .......... .......... .......... 508 TTGAATTATT AACATTAAAC CACTAACTTT ATAATCATAA GCAGGAATA 9693 || || .......... .......... .......... .......... ....GATTA 513 hqPGS_C08HBa0294K15.1-_SGN-E242359- (10624 10132) ******************************************************************************** EST sequence 55 -strand 481 n (File: SGN-E246710-) 1 AGTCCAAGCT AGAAGCATTA GCTCACCCTG AATTTCCGAT GTAGTAAGAC TGGCTTGAAT 61 TACTGTTGAG TTGAACACGA TGGCACGTTT GCTGCACTCC ACAAATAAAC AAGAAGAGAA 121 CATAAAAGTA GGGGTCAGTA CAAAACACGG GTACTGAGTA GATATCATCG GCCAACTCAA 181 AATAGAAATC AATATATATA CCAAGTAATA TCATAAAATC AACTATGATA CTCAACATGT 241 AGCAACAACA AATACTATAT CATTAACAAT TACCGTCAAG TTCACACATG AGGACTCAAG 301 CCTCAATACC ATACTCATTT GGGAATCATG TTCATTAGAT TGAGTATATT AACATCTTTC 361 AAGATTCATT ATCTTTATTT CTCTTGTGTC GGTACGTGAC ACTCCGCTCC CTCAATATTC 421 ATTAATCCTC TTGTGTCGGT ACGTGACACT CCGATCCCCT AAATCTATAT GTCGGTTTGT 481 G Predicted gene structure (within gDNA segment 12254 to 8335): Exon 1 10817 10417 ( 401 n); cDNA 1 402 ( 402 n); score: 0.773 MATCH C08HBa0294K15.1- SGN-E246710- 0.773 401 0.834 C PGS_C08HBa0294K15.1-_SGN-E246710- (10817 10417) Alignment (genomic DNA sequence = upper lines): AGTCCGAGCT AGGAACAATA GCTCACCCTG AAATCTGATT ATGCTGAAGT CTGGCTAGAG 10758 ||||| |||| || | || || |||||||||| || | | | | ||| |||||| || AGTCCAAGCT AGAAGCATTA GCTCACCCTG AATTTCCGAT GTAGT-AAGA CTGGCTTGAA 59 TTGTGGTTGA GTCGAAGTTG TTGGCACGTT TGTTGCACTC CACAAATAAC AAAGAAAGAA 10698 || ||||| || ||| | ||||||||| || ||||||| ||||||||| ||||| | TTACTGTTGA GTTGAACACG ATGGCACGTT TGCTGCACTC CACAAATAAA CAAGAAGAGA 119 ACATACAAGT AGGGGTCAGT ACAAGGCACA AGTACTGAGT AGGTATCATC GGCCAACTCA 10638 ||||| |||| |||||||||| |||| ||| ||||||||| || ||||||| |||||||||| ACATAAAAGT AGGGGTCAGT ACAAAACACG GGTACTGAGT AGATATCATC GGCCAACTCA 179 AAATAGAAAA CAATATACAT --CAGATAAT AACATAAAAT CAACTACAAT ACTCAACAGG 10580 ||||||||| ||||||| || || |||| | |||||||| |||||| || |||||||| | AAATAGAAAT CAATATATAT ACCAAGTAAT ATCATAAAAT CAACTATGAT ACTCAACATG 239 TGACAACAAC AAGTACCATA ACCATTGGGC ACAACC--CA AGCACATCTA TGAGGACTCA 10522 | ||||||| || ||| || | |||| | ||| || || || | |||||||||| TAGCAACAAC AAATACTAT- ATCATTAACA ATTACCGTCA AGTTCACACA TGAGGACTCA 298 AGCCTCCACA CCATACTCAT TTGGGAAACA GGTTCATTAA ATTTGAGTAT ATTAGCATAA 10462 |||||| | | |||||||||| ||||||| || |||||||| | |||||||| |||| ||| AGCCTCAATA CCATACTCAT TTGGGAATCA TGTTCATTAG A-TTGAGTAT ATTAACATCT 357 TTCAAGATTC ATTCTTTTTA CTATCCTGGT GTCAAAACGT GACAC 10417 |||||||||| ||| | |||| | || || ||| |||| ||||| TTCAAGATTC ATTATCTTTA TTTCTCTTGT GTCGGTACGT GACAC 402 hqPGS_C08HBa0294K15.1-_SGN-E246710- (10817 10417) ******************************************************************************** EST sequence 36 -strand 505 n (File: SGN-E353206-) 1 CGCATTGATA CCGAAAAATC AAGGTATAGA GTGNAAGTCA ATCTCAATCA CATCAAACTT 61 GAAACTCTTA TAAATTTTCA GCTATATAAC TCCCATCATC ATAGATCCTG AACTCTGATG 121 TGCTGGAGAC TGGTTAGAGA TGAGGGCGAG TCGTAGTCAA TGGTACACTT GTTGCACTCC 181 ACAAAAAAAC AGAGAAGAAA ATACAAGTAG GGGTCAGTAC AAGGAACACG TACTGAGTAG 241 GTATCATCGG TCAACTCAAA ATAATAATCA ATATATATTG AATAATAATA TAAAATCAAC 301 TACAATACTT AACAGGTGGC AAGCAACAAA ACACATGAAC CATTAACAAC AACAACATAA 361 CATGTACACC ATCAAGCACA CCTATGAGGA CTCATGGCTC CACACCATAC TCATTTGGAA 421 AATAGGTTCT TTGAGATTAG ATATATTAAG TTAGTTCAAG ATTTATTTCC TTTAATGTTA 481 TTGTTTCGGA ACGTGACACT CCGAT Predicted gene structure (within gDNA segment 13018 to 7496): Exon 1 11141 11135 ( 7 n); cDNA 100 106 ( 7 n); score: 1.000 Intron 1 11134 10792 ( 343 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.78) Exon 2 10791 10567 ( 225 n); cDNA 107 330 ( 224 n); score: 0.822 Intron 2 10566 9038 (1529 n); Pd: 0.000 (s: 0.85), Pa: 0.830 (s: 0) Exon 3 9037 9029 ( 9 n); cDNA 331 339 ( 9 n); score: 1.000 MATCH C08HBa0294K15.1- SGN-E353206- 0.822 241 0.477 C PGS_C08HBa0294K15.1-_SGN-E353206- (11141 11135,10791 10567,9037 9029) Alignment (genomic DNA sequence = upper lines): CATAGATGAG TTGTCACGAC CCAAAACGAG CCGTGAGTGG CACCCACACT TACCCTCCTA 11082 ||||||| CATAGAT... .......... .......... .......... .......... .......... 106 TGTGAGAGAA CCAACCAATC TAAACCCCAA CATTTCAACA ATATTAAACA GAATATAATG 11022 .......... .......... .......... .......... .......... .......... 106 CGGAAAACTT AAAACTCATT AACGAAATCA ATAATTAACT TCTAAAACTC AGAACTTATC 10962 .......... .......... .......... .......... .......... .......... 106 ATTATCCCCA AAATCTGGAA GTCATCATCA CAAGAACATC TATCCTCAAA TTACTAAATC 10902 .......... .......... .......... .......... .......... .......... 106 TAAGAGTATC TAAGAAGCTA AAATAAATAA AAGAGATGGT CCATGTCCGA ACTTCAAGAC 10842 .......... .......... .......... .......... .......... .......... 106 ATCAAGACCT GAAAGAAAGA ATCCAGTCCG AGCTAGGAAC AATAGCTCAC CCTGAAATCT 10782 |||||| ||| .......... .......... .......... .......... .......... CCTGAACTCT 116 GATTATGCTG AAGTCTGGCT AGAGTTGTGG TTGAGTCGAA GTTGTTGGCA CGTTTGTTGC 10722 ||| ||||| || |||| | |||| || || |||||| | || ||| | | ||||||| GAT-GTGCTG GAGACTGGTT AGAGATGAGG GCGAGTCGTA GTCAATGGTA CACTTGTTGC 175 ACTCCAC-AA ATAACAAAGA AAGAAACATA CAAGTAGGGG TCAGTACAAG GCACAAGTAC 10663 ||||||| || | |||| ||| | |||| ||| |||||||||| |||||||||| | ||| |||| ACTCCACAAA AAAACAGAGA A-GAAA-ATA CAAGTAGGGG TCAGTACAAG GAACACGTAC 233 TGAGTAGGTA TCATCGGCCA ACTCAAAATA GAAAACAATA TACATCAGAT AATAACATAA 10603 |||||||||| ||||||| || |||||||||| || ||||| || || || ||||| |||| TGAGTAGGTA TCATCGGTCA ACTCAAAATA ATAATCAATA TATATTGAAT AATAATATAA 293 AATCAACTAC AATACTCAAC AGGTGACAA- CAACAAGTAC CATAACCATT GGGCACAACC 10544 |||||||||| |||||| ||| ||||| ||| |||||| AATCAACTAC AATACTTAAC AGGTGGCAAG CAACAAA... .......... .......... 330 CAAGCACATC TATGAGGACT CAAGCCTCCA CACCATACTC ATTTGGGAAA CAGGTTCATT 10484 .......... .......... .......... .......... .......... .......... 330 AAATTTGAGT ATATTAGCAT AATTCAAGAT TCATTCTTTT TACTATCCTG GTGTCAAAAC 10424 .......... .......... .......... .......... .......... .......... 330 GTGACACCCG ATCCATACTA TCCTGGTGTC GGAACGTGAC ACTCTGATCC TCTACTATCC 10364 .......... .......... .......... .......... .......... .......... 330 TGGTGTCGGA ACGTGATACT CGATCCATAC TATCCTGGTG TCGAACGTGA CACCCGATCC 10304 .......... .......... .......... .......... .......... .......... 330 ATACTATCCT GGTGTCGGAA CGTGACACCC GATCCATACT ATCCTGGTGT CGGAACGTGA 10244 .......... .......... .......... .......... .......... .......... 330 CACCCGATCC ATACTATCCT GGTGTCGGAA TGTGACACTC CGATCCCCTA ATTCTCATTC 10184 .......... .......... .......... .......... .......... .......... 330 TTTCAGTTCA TCAAGCCTTC TTTTATACCA AGGTATCATC ATTAACAAAG AGGTTTTAAG 10124 .......... .......... .......... .......... .......... .......... 330 GTTTAAGATT CAACAGCCTC ATCATGCTTA TTTTATCACA ATTATATAAT CACGTCATGC 10064 .......... .......... .......... .......... .......... .......... 330 AAGCACACAA TTAAGCATAT AGAAGACTTT ACAATACTAC CCAACACATA TCATTCGCTA 10004 .......... .......... .......... .......... .......... .......... 330 TTAAGAGTTT ACTATAGCAT AATCCATAAC CTACCTCCAC CGAAGAATTC GTGATCACGC 9944 .......... .......... .......... .......... .......... .......... 330 AAGCTACTCC TCAAGGTCTT TGCTTTCCTC TTCGTTCTTC TCTCCCTCTC GCTCGTTCTC 9884 .......... .......... .......... .......... .......... .......... 330 CCTTCTTTTT CTTTTTCTTT TTTAATTTTC TCCTCTTTCA AAATCCCTTT GTTTTACCTT 9824 .......... .......... .......... .......... .......... .......... 330 AATTACCATA TAATTAAGTA TAAAAGATGC TAAAAGTAAC CCATTACTTA TTCCAAGGTT 9764 .......... .......... .......... .......... .......... .......... 330 GTCTCCTTTA ACCCCCAAGA AATTGAATTA TTAACATTAA ACCACTAACT TTATAATCAT 9704 .......... .......... .......... .......... .......... .......... 330 AAGCAGGAAT AATCCAAAAC ACCCCTTAAA AACTTTTAAC AGAAATCCGA CCCAGTCAGG 9644 .......... .......... .......... .......... .......... .......... 330 GTTACGCAGT CTGTGACGGT CCTTCGTGCC TGCGACGGTC GTCCTGCTAA GTCGTCACAG 9584 .......... .......... .......... .......... .......... .......... 330 AGTTTAGAGA CTCAATTTTT ATTTAAGACC ATGTGACGGT CCGTCGTGCC TACGACGGTC 9524 .......... .......... .......... .......... .......... .......... 330 CGTCCTGCTC TTCCATTGCG AAGTTCAGAG AGTTGTTCTC AGTACCCAAT TTTTCAGAAA 9464 .......... .......... .......... .......... .......... .......... 330 CTAAGTGTTT TGGAACGAGA CCCCCTCGAC GGTCCGTCGT GGTATCCATC GACCCAGACA 9404 .......... .......... .......... .......... .......... .......... 330 GTTATTAACA GAAATAAACT CTACTGCTCA AAACGACTAA CAGGTCGTTA CAATAGACAC 9344 .......... .......... .......... .......... .......... .......... 330 CAATTTACCC ATCGTTCGTC CTTGAACGAT CACAAGAAGA AAAACAAGGG CGAAAAGGAG 9284 .......... .......... .......... .......... .......... .......... 330 TACCTGAATC TGTAAACAGG TGTGGGTATT TTTCTTGCAT ATCAGCCTCC TTCTCCCAAG 9224 .......... .......... .......... .......... .......... .......... 330 TGGACTCTTC AATTGGTCGA TTCTTTCATT GAACCTTGAT GGATGCAATC TCCCTTGACC 9164 .......... .......... .......... .......... .......... .......... 330 TCAGCTTGCG TACTTCTCTA TCTAAGATAG CAACAGGCTC CTCCTCATAA GACAAATTCT 9104 .......... .......... .......... .......... .......... .......... 330 CATCAAGAAG AACTGAATCC CAACGAATGA TGTAGTTTCC ATCCCCATGG TATCTTTTCA 9044 .......... .......... .......... .......... .......... .......... 330 ACATAGACAC ATGAA 9029 |||| ||||| ......ACAC ATGAA 339 hqPGS_C08HBa0294K15.1-_SGN-E353206- (10791 10567) ******************************************************************************** EST sequence 64 -strand 655 n (File: SGN-E356696-) 1 CAATTGGACT CAAGTAGTAG CACGAAAGAA AGAATGAAAG AGTGAAGTTT TCCTAAAGTC 61 TTATAGCCTC TCAAGGAAAA GTAAAAGCGT CCCCCTACCG TTCCTTAAGA CTCTACTAGA 121 CTTGTTCTTG TGTGATGAGA CCAACGAACC TAATGCTCTG ATACCAAGTT TTGTCACGAC 181 CCAAATCCGG GCCGCCACTG GCACCCACAC TTACCCTCNT ATGTGAGCGA ACCAACCAAT 241 CTAAACCTTA ACATTTCAAT GTAATAGCAA CAGAAAGTAA TGCGGAAGAC TTAAACTCAT 301 TAATAAAATC AATAACTACT ATTATTAAAC ATCTATTATT CCCAAAACCT GGAAGTCATC 361 ATCACAAGAA CATCTACTTT AAACTACTAA TTCTAAGAGT TTCTAAGAAG CTAAAAAATT 421 ACATAAGAAG CTAGTCCATG CCGGAAGTTC AAGGCATCAA GACATGAAGG AGAAGATCCA 481 GTCCAAGCTA GAAGCGTTAG CTCACCCTGA AGATCCGGTG TGACGAAGAC TGGCTTGAGT 541 TACTGTTGAG TCGAAGATGA CGGCACGTTT GCTGCACTCC ACAAATAACA AGAAGAAAAA 601 CATAAAAGTA GGGGTCAGTA CAAAACACGG CTACTGAGTA GATATCATCG GCCAA Predicted gene structure (within gDNA segment 13694 to 9754): Exon 1 11131 10642 ( 490 n); cDNA 171 655 ( 485 n); score: 0.795 MATCH C08HBa0294K15.1- SGN-E356696- 0.795 490 0.748 C PGS_C08HBa0294K15.1-_SGN-E356696- (11131 10642) Alignment (genomic DNA sequence = upper lines): TTGTCACGAC CCAAA-ACGA GCCGTGAGTG GCACCCACAC TTACCCTCCT ATGTGAGAGA 11073 |||||||||| ||||| || |||| | || |||||||||| |||||||| | ||||||| || TTGTCACGAC CCAAATCCGG GCCGCCACTG GCACCCACAC TTACCCTCNT ATGTGAGCGA 230 ACCAACCAAT CTAAACCCCA ACATTTCAAC AATAT-TAAA CAGAATATAA TGCGGAAAAC 11014 |||||||||| ||||||| | ||||||||| || || ||||| ||| ||||||| || ACCAACCAAT CTAAACCTTA ACATTTCAAT GTAATAGCAA CAGAAAGTAA TGCGGAAGAC 290 TTAAAACTCA TTAACGAAAT CAATAATTAA CTTCTAAAAC TCAGAACTTA TCATTATCCC 10954 || ||||||| |||| |||| | || ||| || ||| | | | ||| | | ||||| || TT-AAACTCA TTAATAAAAT C---AA-TAA CTACTATTA- TTA-AACATC T-ATTATTCC 342 CAAAATCTGG AAGTCATCAT CACAAGAACA TCTATCCTCA AATTACTAAA TCTAAGAGTA 10894 ||||| |||| |||||||||| |||||||||| |||| | | | || |||||| ||||||||| CAAAACCTGG AAGTCATCAT CACAAGAACA TCTA-CTTTA AACTACTAAT TCTAAGAGTT 401 TCTAAGAAGC TAAAATA-AA TAAAAG-AGA TGGTCCATGT CCGAACTTCA AGACATCAAG 10836 |||||||||| ||||| | | | ||| || | ||||||| | ||| |||| || ||||||| TCTAAGAAGC TAAAAAATTA CATAAGAAGC TAGTCCATGC CGGAAGTTCA AGGCATCAAG 461 ACCTGAAAGA AAGAATCCAG TCCGAGCTAG GAACAATAGC TCACCCTGAA -ATCTGATTA 10777 || |||| || | |||||| ||| |||||| | | |||| |||||||||| ||| | | ACATGAAGGA GAAGATCCAG TCCAAGCTAG AAGCGTTAGC TCACCCTGAA GATCCG-GTG 520 TGCTGAAGTC TGGCTAGAGT TGTGGTTGAG TCGAAGTTGT TGGCACGTTT GTTGCACTCC 10717 || |||| | ||||| |||| | |||||| |||||| || ||||||||| | |||||||| TGACGAAGAC TGGCTTGAGT TACTGTTGAG TCGAAGATGA CGGCACGTTT GCTGCACTCC 580 ACAAATAACA AAGAAAGAAA CATACAAGTA GGGGTCAGTA CAAGGCACAA GTACTGAGTA 10657 |||||||||| | | | ||| |||| ||||| |||||||||| ||| ||| ||||||||| ACAAATAACA AGAAGAAAAA CATAAAAGTA GGGGTCAGTA CAAAACACGG CTACTGAGTA 640 GGTATCATCG GCCAA 10642 | |||||||| ||||| GATATCATCG GCCAA 655 hqPGS_C08HBa0294K15.1-_SGN-E356696- (11131 10642) ******************************************************************************** EST sequence 59 -strand 580 n (File: SGN-E356206-) 1 GAAAAGTAAA AGCGTCCCCN TACCGTCCCT TAAGACTCTA CTAGACTTGT TCTTGTGTGA 61 TGAGACCAAC GACCCTAATG CTCTGATACC AAGTTTTGTC ACGACCCAAA TCCGGGCCGC 121 CACTGGCACC CACACTTACC CTCCTATGTG AGCGAACCAA CCAATCTAAA CCTTAACATT 181 TCAATGTAAT AGCAACAGAA AGTAATGCGG AAGACTTAAA CTCATTAATA AAATCAATAA 241 CTACTATTAT TAAACATCTA TTATTCCCAA AACCTGGAAG TCATCATCAC AAGAACATCT 301 ACTTTAAACT ACTAATTCTA AGAGTTTCTA AGAAGCTAAA AAATTACATA AGAAGCTAGT 361 CCATGCCGGA AGTTCAAGGC ATCAAGACAT GAAGGAGAAG ATCCAGTCCA AGCTAGAAGC 421 GTTAGCTCAC CCTGAAGATC CGGTGTGACG AAGACTGGCT TGAGTTACTG TTGAGTCGAA 481 GATGACGGCA CGTTTGCTGC ACTCCACAAA TAACAAGAAG AAAAACATAA AAGTAGGGGT 541 CAGTACAAAA CACGGCTACT GAGTAGATAT CATCGGCCAA Predicted gene structure (within gDNA segment 12944 to 9754): Exon 1 11131 10642 ( 490 n); cDNA 96 580 ( 485 n); score: 0.797 MATCH C08HBa0294K15.1- SGN-E356206- 0.797 490 0.845 C PGS_C08HBa0294K15.1-_SGN-E356206- (11131 10642) Alignment (genomic DNA sequence = upper lines): TTGTCACGAC CCAAA-ACGA GCCGTGAGTG GCACCCACAC TTACCCTCCT ATGTGAGAGA 11073 |||||||||| ||||| || |||| | || |||||||||| |||||||||| ||||||| || TTGTCACGAC CCAAATCCGG GCCGCCACTG GCACCCACAC TTACCCTCCT ATGTGAGCGA 155 ACCAACCAAT CTAAACCCCA ACATTTCAAC AATAT-TAAA CAGAATATAA TGCGGAAAAC 11014 |||||||||| ||||||| | ||||||||| || || ||||| ||| ||||||| || ACCAACCAAT CTAAACCTTA ACATTTCAAT GTAATAGCAA CAGAAAGTAA TGCGGAAGAC 215 TTAAAACTCA TTAACGAAAT CAATAATTAA CTTCTAAAAC TCAGAACTTA TCATTATCCC 10954 || ||||||| |||| |||| | || ||| || ||| | | | ||| | | ||||| || TT-AAACTCA TTAATAAAAT C---AA-TAA CTACTATTA- TTA-AACATC T-ATTATTCC 267 CAAAATCTGG AAGTCATCAT CACAAGAACA TCTATCCTCA AATTACTAAA TCTAAGAGTA 10894 ||||| |||| |||||||||| |||||||||| |||| | | | || |||||| ||||||||| CAAAACCTGG AAGTCATCAT CACAAGAACA TCTA-CTTTA AACTACTAAT TCTAAGAGTT 326 TCTAAGAAGC TAAAATA-AA TAAAAG-AGA TGGTCCATGT CCGAACTTCA AGACATCAAG 10836 |||||||||| ||||| | | | ||| || | ||||||| | ||| |||| || ||||||| TCTAAGAAGC TAAAAAATTA CATAAGAAGC TAGTCCATGC CGGAAGTTCA AGGCATCAAG 386 ACCTGAAAGA AAGAATCCAG TCCGAGCTAG GAACAATAGC TCACCCTGAA -ATCTGATTA 10777 || |||| || | |||||| ||| |||||| | | |||| |||||||||| ||| | | ACATGAAGGA GAAGATCCAG TCCAAGCTAG AAGCGTTAGC TCACCCTGAA GATCCG-GTG 445 TGCTGAAGTC TGGCTAGAGT TGTGGTTGAG TCGAAGTTGT TGGCACGTTT GTTGCACTCC 10717 || |||| | ||||| |||| | |||||| |||||| || ||||||||| | |||||||| TGACGAAGAC TGGCTTGAGT TACTGTTGAG TCGAAGATGA CGGCACGTTT GCTGCACTCC 505 ACAAATAACA AAGAAAGAAA CATACAAGTA GGGGTCAGTA CAAGGCACAA GTACTGAGTA 10657 |||||||||| | | | ||| |||| ||||| |||||||||| ||| ||| ||||||||| ACAAATAACA AGAAGAAAAA CATAAAAGTA GGGGTCAGTA CAAAACACGG CTACTGAGTA 565 GGTATCATCG GCCAA 10642 | |||||||| ||||| GATATCATCG GCCAA 580 hqPGS_C08HBa0294K15.1-_SGN-E356206- (11131 10642) ******************************************************************************** EST sequence 154 +strand 835 n (File: SGN-E546219+) 1 TTTTTTTTTT ATTAACGTAA TCAATTAAAT AAACTTCTAA AGTTTAATAT TTATTAATCC 61 CAAAATCTGG AAGTCATCAC ATCAATAACA TCTATCCTCA GTAAATCTAA GAGTATTTAA 121 GAAGCTAAAA TAAGTAAAAA GAAAACGGTC CATGTCCGAA CTTCAAGACA TCAAGACGTG 181 AGGGAGAGAA TCCAGTCCGA GCTAGGAATA ATAGCTCACC CTGAAATCTG ATGTGCTGGA 241 GACTGGCTAG AGTTGAAGGC GGGTCGAAGT TGATGGTGCA CTTGCTTCTT ACAACTCATC 301 CTTCACTTGA TCTGTTTGAG TTTGTGATAT GCTAAAATCA AAGGCAGGGC TACCTCTGTT 361 TGTCTGGATA AATTCAATAA TGGCCTCTTT TGTTCTATTA CCCTCAAACC GTGACAAACT 421 ACCCGTTGAA GATCTCAAGT ATAAAGTTGG GAATCCTTCA ACTTCAAATA CGTCACGAGG 481 TATATCATTT TCCGTTCCAT CAATTTTAGC AATCACGACA TGAGGATCTT TTTCAAATGA 541 GATAGCTATT TCATCCAAGA CGGGAGCAAA CTCCTCACAA TATCTACACC CAAGTCGATA 601 GAACTCCAAC AGTACATCTT TTCCCGAATT AAACACCATA TCGTCAAGAG TCTCTGCAAC 661 CACCACCTTC ACAGTTTCAT TGTTAAATTC TGGAATTGGC TGTGACTTCA AGTATGGCTT 721 CAACTTTCTG TCCTTACAAT CCTTCAACCA AGATGCAAGG TTATCGGGTT GTACATGTCG 781 CTGAACGTAT TTTGTGCTAC CCATGGTAAG TACGAAGAAT AAAGGTGTCT GATCA Predicted gene structure (within gDNA segment 12661 to 4139): Exon 1 10955 10735 ( 221 n); cDNA 59 275 ( 217 n); score: 0.846 PPA cDNA 13 1 MATCH C08HBa0294K15.1- SGN-E546219+ 0.846 221 0.265 C PGS_C08HBa0294K15.1-_SGN-E546219+ (10955 10735) Alignment (genomic DNA sequence = upper lines): CCCAAAATCT GGAAGTCATC ATCACAAGAA CATCTATCCT CAAATTACTA AATCTAAGAG 10896 |||||||||| |||||||||| | ||| || |||||||||| | | || |||||||||| CCCAAAATCT GGAAGTCATC ACATCAATAA CATCTATCCT C-----AGTA AATCTAAGAG 113 TATCTAAGAA GCTAAAATAA AT-AAAAG-A GATGGTCCAT GTCCGAACTT CAAGACATCA 10838 ||| |||||| |||||||||| | ||||| | | ||||||| |||||||||| |||||||||| TATTTAAGAA GCTAAAATAA GTAAAAAGAA AACGGTCCAT GTCCGAACTT CAAGACATCA 173 AGACCTGAAA GAAAGAATCC AGTCCGAGCT AGGAACAATA GCTCACCCTG AAATCTGATT 10778 |||| ||| || ||||||| |||||||||| ||||| |||| |||||||||| |||||||| | AGACGTGAGG GAGAGAATCC AGTCCGAGCT AGGAATAATA GCTCACCCTG AAATCTGA-T 232 ATGCTGAAGT CTGGCTAGAG TTGTGGTTGA GTCGAAGTTG TTG 10735 ||||| || |||||||||| ||| | | |||||||||| || GTGCTGGAGA CTGGCTAGAG TTGAAGGCGG GTCGAAGTTG ATG 275 hqPGS_C08HBa0294K15.1-_SGN-E546219+ (10955 10735) ******************************************************************************** EST sequence 79 +strand 679 n (File: SGN-E370357+) 1 TTTTTTTTTT CTTACAATTA TATTATGAAT TCGATAATCT TTAATGTCAC GACCCAAATC 61 GAGCCGCAAG TGGCACCCAC ACTTACCCTC CTATGTGAGC GAACCAACCA ATACAAAATC 121 CAACATTTCA ATATAATGAC GGAATATAAT GCGGAAGACT TAAACTCATT AATGAAAATC 181 AATTAAATAA CTTCTAAAAA CTCAACAACT ATTATTATCC CCAAAATCTG GAAGTCATCA 241 TCACAAGAAC ATCTATCCTC AAATTACTAA TTCTAAGAGT ATCTAGAAAG CTAGAATAAC 301 TAAAAAGCTA GTCCATGCCG GAACTTCAAG GCATCAAGAC ATGAAGAAGA AGATCCAGTC 361 CAAGCTAGAA GCGTTAGCTC ACACTGAAAT CCGGTATAAT GAAGACTGGC TAGAGTTGCG 421 GTTGAGTTGA AGACGACGGT ACGTTTGCTT TATTCGAGTG TCAATTAATC ATTCGGCTGT 481 CACCCAAATA TTATTGATTG ATTACACCTC TGCCATTTGT AAAATTTTTC AAATTTGCCT 541 ACGGATGCAG AATTTTCCTC GAATTTCTGA TGTGTTTTCT TGTAAATAGT GGCCATTTGT 601 GTAAGTAAAT GCCCATTTCT CCTCCTACAA AGTCCAATTC CATTTTTCCC CCAATCCACC 661 ATGGCAACAC CACCTCCAA Predicted gene structure (within gDNA segment 12386 to 6205): Exon 1 11130 10741 ( 390 n); cDNA 45 432 ( 388 n); score: 0.842 PPA cDNA 13 1 MATCH C08HBa0294K15.1- SGN-E370357+ 0.842 390 0.574 C PGS_C08HBa0294K15.1-_SGN-E370357+ (11130 10741) Alignment (genomic DNA sequence = upper lines): TGTCACGACC CAAAACGAGC CGTGAGTGGC ACCCACACTT ACCCTCCTAT GTGAGAGAAC 11071 |||||||||| |||| ||||| || |||||| |||||||||| |||||||||| ||||| |||| TGTCACGACC CAAATCGAGC CGCAAGTGGC ACCCACACTT ACCCTCCTAT GTGAGCGAAC 104 CAACCAATCT AAACCCCAAC ATTTCAACAA TATTAAACAG AATATAATGC GGAAAACTTA 11011 |||||||| ||| ||||| ||||||| | || | || | |||||||||| |||| |||| CAACCAATAC AAAATCCAAC ATTTCAA-TA TAAT-GACGG AATATAATGC GGAAGACTT- 161 AAACTCATTA ACG-AAATCA A-TAATTAAC TTCT-AAAAC TCAGAACTTA TCATTATCCC 10954 |||||||||| | | |||||| | ||| |||| |||| ||||| ||| | || | |||||||| AAACTCATTA ATGAAAATCA ATTAAATAAC TTCTAAAAAC TCAACAACTA TTATTATCCC 221 CAAAATCTGG AAGTCATCAT CACAAGAACA TCTATCCTCA AATTACTAAA TCTAAGAGTA 10894 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| CAAAATCTGG AAGTCATCAT CACAAGAACA TCTATCCTCA AATTACTAAT TCTAAGAGTA 281 TCTAAGAAGC TAAAATAAAT AAAAGAGATG GTCCATGTCC GAACTTCAAG ACATCAAGAC 10834 |||| |||| || ||||| | |||| || | ||||||| | |||||||||| ||||||||| TCTAGAAAGC TAGAATAACT AAAA-AGCTA GTCCATGCCG GAACTTCAAG GCATCAAGAC 340 CTGAAAGAAA GAATCCAGTC CGAGCTAGGA ACAATAGCTC ACCCTGAAAT CTGATTATGC 10774 |||| | | |||||||| | |||||| | | |||||| || ||||||| | | ||| ATGAAGAAGA AGATCCAGTC CAAGCTAGAA GCGTTAGCTC ACACTGAAAT CCG-GTATAA 399 TGAAGTCTGG CTAGAGTTGT GGTTGAGTCG AAG 10741 ||||| |||| ||||||||| |||||||| | ||| TGAAGACTGG CTAGAGTTGC GGTTGAGTTG AAG 432 hqPGS_C08HBa0294K15.1-_SGN-E370357+ (11130 10741) ******************************************************************************** EST sequence 13 -strand 299 n (File: SGN-E373117-) 1 TTTTTTTTTT TCTAAAAACT CAACAACTAT TATTATCCCC AAAATCTGGA AGTCATCATC 61 ACAAGAACAT CTACTTCAAA TTACTAAATC TAAGAGTATC TAAGAAGCTA AAATACATAA 121 ACAGCTAGTC CATGCCGGAA CTTCAAGGCA TCAAGACATG AAGAAGAAGA TCCAGTCCAA 181 GCTAGAAGCG TTAGCTCACC CTGAAATCCG ATGTAATGAA GACTGGCTAG AGTTGCGGTT 241 GAGTTGAAGA CGACGGTACG TTTGCCAAAA TTACGACAGT ATTTGGACAA GCTAGAAGA Predicted gene structure (within gDNA segment 11881 to 8437): Exon 1 10987 10741 ( 247 n); cDNA 5 249 ( 245 n); score: 0.840 MATCH C08HBa0294K15.1- SGN-E373117- 0.840 247 0.826 C PGS_C08HBa0294K15.1-_SGN-E373117- (10987 10741) Alignment (genomic DNA sequence = upper lines): TTAACTTCTA A-AACTCAGA ACTTATCATT ATCCCCAAAA TCTGGAAGTC ATCATCACAA 10929 || ||||| | |||||| | ||| ||| |||||||||| |||||||||| |||||||||| TTTTTTTCTA AAAACTCAAC AACTATTATT ATCCCCAAAA TCTGGAAGTC ATCATCACAA 64 GAACATCTAT CCTCAAATTA CTAAATCTAA GAGTATCTAA GAAGCTAAAA TAAATAAAAG 10869 ||||||||| | |||||||| |||||||||| |||||||||| |||||||||| || || ||| GAACATCTA- CTTCAAATTA CTAAATCTAA GAGTATCTAA GAAGCTAAAA TACAT-AAAC 122 AGATGGTCCA TGTCCGAACT TCAAGACATC AAGACCTGAA AGAAAGAATC CAGTCCGAGC 10809 || | ||||| || | ||||| ||||| |||| ||||| |||| | | ||| |||||| ||| AGCTAGTCCA TGCCGGAACT TCAAGGCATC AAGACATGAA GAAGAAGATC CAGTCCAAGC 182 TAGGAACAAT AGCTCACCCT GAAATCTGAT TATGCTGAAG TCTGGCTAGA GTTGTGGTTG 10749 ||| | | | |||||||||| |||||| || | | ||||| ||||||||| |||| ||||| TAGAAGCGTT AGCTCACCCT GAAATCCGA- TGTAATGAAG ACTGGCTAGA GTTGCGGTTG 241 AGTCGAAG 10741 ||| |||| AGTTGAAG 249 hqPGS_C08HBa0294K15.1-_SGN-E373117- (10987 10741) ******************************************************************************** EST sequence 98 +strand 299 n (File: SGN-E373116+) 1 TTTTTTTTTT CTAAAAACTC AACAACTATT ATTATCCCCA AAATCTGGAA GTCATCATCA 61 CAAGAACATC TACTTCAAAT TACTAAATCT AAGAGTATCT AAGAAGCTAA AATACATAAA 121 CAGCTAGTCC ATGCCGGAAC TTCAAGGCAT CAAGACATGA AGAAGAAGAT CCAGTCCAAG 181 CTAGAAGCGT TAGCTCACCC TGAAATCCGA TGTAATGAAG ACTGGCTAGA GTTGCGGTTG 241 AGTTGAAGAC GACGGTACGT TTGCCAAAAT TACGACAGTA TTTGGACAAG CTAGAAGAG Predicted gene structure (within gDNA segment 11861 to 8417): Exon 1 10987 10741 ( 247 n); cDNA 4 248 ( 245 n); score: 0.840 MATCH C08HBa0294K15.1- SGN-E373116+ 0.840 247 0.826 C PGS_C08HBa0294K15.1-_SGN-E373116+ (10987 10741) Alignment (genomic DNA sequence = upper lines): TTAACTTCTA AAA-CTCAGA ACTTATCATT ATCCCCAAAA TCTGGAAGTC ATCATCACAA 10929 || ||||| ||| |||| | ||| ||| |||||||||| |||||||||| |||||||||| TTTTTTTCTA AAAACTCAAC AACTATTATT ATCCCCAAAA TCTGGAAGTC ATCATCACAA 63 GAACATCTAT CCTCAAATTA CTAAATCTAA GAGTATCTAA GAAGCTAAAA TAAATAAAAG 10869 ||||||||| | |||||||| |||||||||| |||||||||| |||||||||| || || ||| GAACATCTA- CTTCAAATTA CTAAATCTAA GAGTATCTAA GAAGCTAAAA TACAT-AAAC 121 AGATGGTCCA TGTCCGAACT TCAAGACATC AAGACCTGAA AGAAAGAATC CAGTCCGAGC 10809 || | ||||| || | ||||| ||||| |||| ||||| |||| | | ||| |||||| ||| AGCTAGTCCA TGCCGGAACT TCAAGGCATC AAGACATGAA GAAGAAGATC CAGTCCAAGC 181 TAGGAACAAT AGCTCACCCT GAAATCTGAT TATGCTGAAG TCTGGCTAGA GTTGTGGTTG 10749 ||| | | | |||||||||| |||||| || | | ||||| ||||||||| |||| ||||| TAGAAGCGTT AGCTCACCCT GAAATCCGA- TGTAATGAAG ACTGGCTAGA GTTGCGGTTG 240 AGTCGAAG 10741 ||| |||| AGTTGAAG 248 hqPGS_C08HBa0294K15.1-_SGN-E373116+ (10987 10741) ******************************************************************************** EST sequence 39 -strand 219 n (File: SGN-E298638-) 1 TTTTTTTTTT TCTAAAAACT CAACAACTAT TATTATCCCC AAAATCTGGC AGTCATCATC 61 ACAAGAACAT GTACTTCAAA TTACTAAATC TAAGAGTATC TAAGAAGCTA AAATACATAA 121 ACAGCTAGTC CATGCCGGAA CTTCAAGGCA TCAAGACATG AAGAAGAAGA TCCAGTCCAA 181 GCTAGAAGCG TTAGCTCACC CTGAAATCCG ATGTAATGA Predicted gene structure (within gDNA segment 11881 to 9237): Exon 1 10987 10771 ( 217 n); cDNA 5 219 ( 215 n); score: 0.823 MATCH C08HBa0294K15.1- SGN-E298638- 0.823 217 0.991 C PGS_C08HBa0294K15.1-_SGN-E298638- (10987 10771) Alignment (genomic DNA sequence = upper lines): TTAACTTCTA A-AACTCAGA ACTTATCATT ATCCCCAAAA TCTGGAAGTC ATCATCACAA 10929 || ||||| | |||||| | ||| ||| |||||||||| ||||| |||| |||||||||| TTTTTTTCTA AAAACTCAAC AACTATTATT ATCCCCAAAA TCTGGCAGTC ATCATCACAA 64 GAACATCTAT CCTCAAATTA CTAAATCTAA GAGTATCTAA GAAGCTAAAA TAAATAAAAG 10869 |||||| || | |||||||| |||||||||| |||||||||| |||||||||| || || ||| GAACATGTA- CTTCAAATTA CTAAATCTAA GAGTATCTAA GAAGCTAAAA TACAT-AAAC 122 AGATGGTCCA TGTCCGAACT TCAAGACATC AAGACCTGAA AGAAAGAATC CAGTCCGAGC 10809 || | ||||| || | ||||| ||||| |||| ||||| |||| | | ||| |||||| ||| AGCTAGTCCA TGCCGGAACT TCAAGGCATC AAGACATGAA GAAGAAGATC CAGTCCAAGC 182 TAGGAACAAT AGCTCACCCT GAAATCTGAT TATGCTGA 10771 ||| | | | |||||||||| |||||| || | | ||| TAGAAGCGTT AGCTCACCCT GAAATCCGA- TGTAATGA 219 hqPGS_C08HBa0294K15.1-_SGN-E298638- (10987 10771) ******************************************************************************** EST sequence 52 -strand 620 n (File: SGN-E238551-) 1 CTATTATTTC CCAAAATCTG GAAGTTATCA TCACAAGAAC ATCTACTTCG AATTACTAAA 61 TCTAAGAGTA TCTAAGAAGC TAAAATACAT AAACAGCTAG TCCATGCCGG AACTTCAAGG 121 CATCAAGACA TGAAGAAGAA GATCCAGTCC AAGCTAGAAG CTTTGTTTTA TCGAAAAAAG 181 GTGATTTTTC GAAAAGAGTT TGTTTTATTT TAAAGTATTT TTCGACTTTA GGAGTCGCCA 241 CTTAATTTTT AAGAAAAATC AAGAAAACTC ATTCTCAAAA CAATTTAAAC AGAAAAGTCG 301 TTTTGAAAAT ATTTTTTAGG ATTCGGGATT CTTATTAGCG TCTTAGGAAG GTGTTTAAGG 361 CACCTAAGAC ACTCCGTTAA ATACGGTTTT CCAACGACTA ACTTATTTGA TTATTTTTAT 421 TTTTACCCTT TGCAAATTTA TTTGAACTTT TATCACGATT TACTTAGCCA AACTTTGCAA 481 ATTTGAGATA TTAATCTTTT AAGATTCCGT CTTAGTTAAA CTTTCTAAGC CTTAACTCTC 541 TAAGCAGACT TTCAAATTTT AAACCTCTAT CGTTTCAAAA CTTCAATTTT TATTTTTTAG 601 TTTCATAAAG CAAAAGGCGT Predicted gene structure (within gDNA segment 11655 to 4947): Exon 1 10965 10806 ( 160 n); cDNA 2 157 ( 156 n); score: 0.863 Intron 1 10805 10172 ( 634 n); Pd: 0.000 (s: 0.82), Pa: 0.000 (s: 0) Exon 2 10171 10158 ( 14 n); cDNA 158 171 ( 14 n); score: 0.857 MATCH C08HBa0294K15.1- SGN-E238551- 0.863 174 0.281 C PGS_C08HBa0294K15.1-_SGN-E238551- (10965 10806,10171 10158) Alignment (genomic DNA sequence = upper lines): TATCATTATC CCCAAAATCT GGAAGTCATC ATCACAAGAA CATCTATCCT CAAATTACTA 10906 ||| ||| || || ||||||| |||||| ||| |||||||||| |||||| | | | |||||||| TATTATT-TC CC-AAAATCT GGAAGTTATC ATCACAAGAA CATCTA-CTT CGAATTACTA 58 AATCTAAGAG TATCTAAGAA GCTAAAATAA ATAAAAGAGA TGGTCCATGT CCGAACTTCA 10846 |||||||||| |||||||||| ||||||||| ||||| || | ||||||| | |||||||| AATCTAAGAG TATCTAAGAA GCTAAAATAC ATAAA-CAGC TAGTCCATGC CGGAACTTCA 117 AGACATCAAG ACCTGAAAGA AAGAATCCAG TCCGAGCTAG GAACAATAGC TCACCCTGAA 10786 || ||||||| || |||| | | |||||| ||| |||||| AGGCATCAAG ACATGAAGAA GAAGATCCAG TCCAAGCTAG .......... .......... 157 ATCTGATTAT GCTGAAGTCT GGCTAGAGTT GTGGTTGAGT CGAAGTTGTT GGCACGTTTG 10726 .......... .......... .......... .......... .......... .......... 157 TTGCACTCCA CAAATAACAA AGAAAGAAAC ATACAAGTAG GGGTCAGTAC AAGGCACAAG 10666 .......... .......... .......... .......... .......... .......... 157 TACTGAGTAG GTATCATCGG CCAACTCAAA ATAGAAAACA ATATACATCA GATAATAACA 10606 .......... .......... .......... .......... .......... .......... 157 TAAAATCAAC TACAATACTC AACAGGTGAC AACAACAAGT ACCATAACCA TTGGGCACAA 10546 .......... .......... .......... .......... .......... .......... 157 CCCAAGCACA TCTATGAGGA CTCAAGCCTC CACACCATAC TCATTTGGGA AACAGGTTCA 10486 .......... .......... .......... .......... .......... .......... 157 TTAAATTTGA GTATATTAGC ATAATTCAAG ATTCATTCTT TTTACTATCC TGGTGTCAAA 10426 .......... .......... .......... .......... .......... .......... 157 ACGTGACACC CGATCCATAC TATCCTGGTG TCGGAACGTG ACACTCTGAT CCTCTACTAT 10366 .......... .......... .......... .......... .......... .......... 157 CCTGGTGTCG GAACGTGATA CTCGATCCAT ACTATCCTGG TGTCGAACGT GACACCCGAT 10306 .......... .......... .......... .......... .......... .......... 157 CCATACTATC CTGGTGTCGG AACGTGACAC CCGATCCATA CTATCCTGGT GTCGGAACGT 10246 .......... .......... .......... .......... .......... .......... 157 GACACCCGAT CCATACTATC CTGGTGTCGG AATGTGACAC TCCGATCCCC TAATTCTCAT 10186 .......... .......... .......... .......... .......... .......... 157 TCTTTCAGTT CATCAAGCCT TCTTTTAT 10158 |||| | | |||||| .......... ....AAGCTT TGTTTTAT 171 hqPGS_C08HBa0294K15.1-_SGN-E238551- (10965 10806) ******************************************************************************** EST sequence 19 -strand 402 n (File: SGN-E352844-) 1 TTTTTTTTAT AAAAACCAAT TCAATAACTA TTATTTCCCA AAATCTGGAA GTTATCATCA 61 CAAGAACATC TACTTCGAAT TACTAAATCT AAGAGTATCT AAGAAGCTAA AATACATAAA 121 CAGCTAGTCC ATGCCGGAAC TTCAAGGCAT CAAGACATGA AGAAGAAGAT CCAGTCCAAG 181 CTAGAAGCTT TGTTTTATCG AAAAAAGGTG ATTTTTCGAA AAGAGTTTGT TTTATTTTAA 241 AGTATTTTTC GACTTTAGGA GTCGCCACTT AATTTTTAAG AAAAATCAAG AAAACTCATT 301 CTCAAAACAA TTTAAACAGA AAAGTCGTTT TGAAAATATT TTTTAGGATT CGGGATTCTT 361 ATTAGCGTCT TAGGAAGGTG TTTAAGGCAC CTAAGACACT CC Predicted gene structure (within gDNA segment 11925 to 7397): Exon 1 10955 10806 ( 150 n); cDNA 37 184 ( 148 n); score: 0.873 Intron 1 10805 10172 ( 634 n); Pd: 0.000 (s: 0.82), Pa: 0.000 (s: 0) Exon 2 10171 10158 ( 14 n); cDNA 185 198 ( 14 n); score: 0.857 MATCH C08HBa0294K15.1- SGN-E352844- 0.873 164 0.408 C PGS_C08HBa0294K15.1-_SGN-E352844- (10955 10806,10171 10158) Alignment (genomic DNA sequence = upper lines): CCCAAAATCT GGAAGTCATC ATCACAAGAA CATCTATCCT CAAATTACTA AATCTAAGAG 10896 |||||||||| |||||| ||| |||||||||| |||||| | | | |||||||| |||||||||| CCCAAAATCT GGAAGTTATC ATCACAAGAA CATCTA-CTT CGAATTACTA AATCTAAGAG 95 TATCTAAGAA GCTAAAATAA ATAAAAGAGA TGGTCCATGT CCGAACTTCA AGACATCAAG 10836 |||||||||| ||||||||| || ||| || | ||||||| | |||||||| || ||||||| TATCTAAGAA GCTAAAATAC AT-AAACAGC TAGTCCATGC CGGAACTTCA AGGCATCAAG 154 ACCTGAAAGA AAGAATCCAG TCCGAGCTAG GAACAATAGC TCACCCTGAA ATCTGATTAT 10776 || |||| | | |||||| ||| |||||| ACATGAAGAA GAAGATCCAG TCCAAGCTAG .......... .......... .......... 184 GCTGAAGTCT GGCTAGAGTT GTGGTTGAGT CGAAGTTGTT GGCACGTTTG TTGCACTCCA 10716 .......... .......... .......... .......... .......... .......... 184 CAAATAACAA AGAAAGAAAC ATACAAGTAG GGGTCAGTAC AAGGCACAAG TACTGAGTAG 10656 .......... .......... .......... .......... .......... .......... 184 GTATCATCGG CCAACTCAAA ATAGAAAACA ATATACATCA GATAATAACA TAAAATCAAC 10596 .......... .......... .......... .......... .......... .......... 184 TACAATACTC AACAGGTGAC AACAACAAGT ACCATAACCA TTGGGCACAA CCCAAGCACA 10536 .......... .......... .......... .......... .......... .......... 184 TCTATGAGGA CTCAAGCCTC CACACCATAC TCATTTGGGA AACAGGTTCA TTAAATTTGA 10476 .......... .......... .......... .......... .......... .......... 184 GTATATTAGC ATAATTCAAG ATTCATTCTT TTTACTATCC TGGTGTCAAA ACGTGACACC 10416 .......... .......... .......... .......... .......... .......... 184 CGATCCATAC TATCCTGGTG TCGGAACGTG ACACTCTGAT CCTCTACTAT CCTGGTGTCG 10356 .......... .......... .......... .......... .......... .......... 184 GAACGTGATA CTCGATCCAT ACTATCCTGG TGTCGAACGT GACACCCGAT CCATACTATC 10296 .......... .......... .......... .......... .......... .......... 184 CTGGTGTCGG AACGTGACAC CCGATCCATA CTATCCTGGT GTCGGAACGT GACACCCGAT 10236 .......... .......... .......... .......... .......... .......... 184 CCATACTATC CTGGTGTCGG AATGTGACAC TCCGATCCCC TAATTCTCAT TCTTTCAGTT 10176 .......... .......... .......... .......... .......... .......... 184 CATCAAGCCT TCTTTTAT 10158 |||| | | |||||| ....AAGCTT TGTTTTAT 198 hqPGS_C08HBa0294K15.1-_SGN-E352844- (10955 10806) ******************************************************************************** EST sequence 130 -strand 780 n (File: SGN-E543331-) 1 CAACTACAAT AACAATGTTT TCGCGTTTAA ATTGTTAGAA CCGGAAATAA GCAGGGTAAA 61 CGCGGAAAGC TAGCAAAGCA AACCTCAAAA GACCACGAGT ATGAAAGACA ACGAGAAATA 121 TACCAAAAGA CACAAAGATT TAACGTGGTT CGGTCAATCG ACCTACGTCC ACAATGGAGA 181 TGAGCAATCC ACTATTAATA TGAGAGTACA AAATACAGAG AGAAACAACC TCAACCAATT 241 CACTAAGAAT ACACGGGAAC ATTTTCCTAC CAGAAAAAGA ATTAGTCAAT TCAAAACTTT 301 TTTCCTAAAA GAAAAACCTA TTTATGATAA GAAATTTAGG ACAAAATAAA ATCCAACATA 361 AATGATGTAA TTATACAATT CATATCATCA GACAATGGTT CATGGATCCA AAATCTTGAA 421 TGATTCCATT TTGGTTTGAG CTCAAACATC ACCATCTATA TAACTAAAAC TCGTCGAAAT 481 TGACTCAACC TGCTCATCTG ACACTTGAAA ATTCGAGACT CAAATTTAAT CATTAAGATG 541 AATTTTGTGA ATTTAAATAC CTTTTGCACG AAATGTACGC TGATAAAGCA TTTTAAGTGT 601 TTTTGAGGAG TAGCAGACGA AGCAATAGCG GATGGTAATG GTGATGGACA ATCATTGATC 661 CTTAACGAAG TTGCTCGAAT TCCTTCAGAA ATTTCCTCCA TAGTAAATTG TGATTTGATT 721 AATTATTGGC TCAAATAAAC AAGAAAATGG ATGAACAAGA ACTAATTAAG CATGTTTATG Predicted gene structure (within gDNA segment 19677 to 27289): Exon 1 20920 21137 ( 218 n); cDNA 40 259 ( 220 n); score: 0.892 Intron 1 21138 21271 ( 134 n); Pd: 0.699 (s: 0.84), Pa: 0.000 (s: 0.81) Exon 2 21272 21384 ( 113 n); cDNA 260 374 ( 115 n); score: 0.810 MATCH C08HBa0294K15.1+ SGN-E543331- 0.864 331 0.424 C PGS_C08HBa0294K15.1+_SGN-E543331- (20920 21137,21272 21384) Alignment (genomic DNA sequence = upper lines): ACCGGAAATA AGAAGGTGTA AACGCGG-AA GCTAGCAAAG CAAACCTCAA AAGACCACGA 20978 |||||||||| || ||| ||| ||||||| || |||||||||| |||||||||| |||||||||| ACCGGAAATA AGCAGG-GTA AACGCGGAAA GCTAGCAAAG CAAACCTCAA AAGACCACGA 98 GTAAG-AATA -AACGAGAAA TATATCAAAA GACACAAAGA TTTAACGTGA TTCGGTCAAT 21036 ||| | || | ||||||||| |||| ||||| |||||||||| ||||||||| |||||||||| GTATGAAAGA CAACGAGAAA TATACCAAAA GACACAAAGA TTTAACGTGG TTCGGTCAAT 158 CGACCTACGT CCACAAAGGA GATGAGCAAT CCACTATAAA TATGAGAGTA CAAAATACAG 21096 |||||||||| |||||| ||| |||||||||| ||||||| || |||||||||| |||||||||| CGACCTACGT CCACAATGGA GATGAGCAAT CCACTATTAA TATGAGAGTA CAAAATACAG 218 AGAAAAACAA CCTCAATCAA TTCACTCGAA ATACATGCGA GGTTCACAAG TGATAACATA 21156 ||| |||||| |||||| ||| |||||| | ||||| | || AGAGAAACAA CCTCAACCAA TTCACTAAGA ATACACGGGA A......... .......... 259 TCAAGCTTGT AACCCATAAA TTCTCCACCT AACCAAAACT CTCAAAGCAT TTAAGACTAC 21216 .......... .......... .......... .......... .......... .......... 259 ATTGTGAATG CTGATTAAGT TAGAAGAAAC ATGCCTCTAT TTATAGAGTC CTAAACTTTT 21276 | ||| .......... .......... .......... .......... .......... .....CATTT 264 TCCTACCAGA AAAA-TATTA GTCATTCCAA AAC-TTTTTC CTAAAAGGAA AACCTATTTA 21334 |||||||||| |||| |||| |||| | ||| ||| |||||| ||||||| || |||||||||| TCCTACCAGA AAAAGAATTA GTCAATTCAA AACTTTTTTC CTAAAAGAAA AACCTATTTA 324 TGGTAAGAAA TTTAGGGC-A AATAATATCC AACCTACATT ACTGAATTTA T 21384 || ||||||| |||||| | | ||||| |||| ||| || || | || | ||| | TGATAAGAAA TTTAGGACAA AATAAAATCC AACATAAATG A-TGTAATTA T 374 hqPGS_C08HBa0294K15.1+_SGN-E543331- (20920 21137,21272 21384) ******************************************************************************** EST sequence 10 +strand 595 n (File: SGN-E271645+) 1 GATTAGTCAA TCCAAAATTT TTCCCTAAAA GGAAAACCTA TTTATGTTAA GAAATTATGG 61 TAAATAAAAT CCAACAAATC TCCTCCCCCT TGGCCTGTAT TTCTGACCAA AATAAATTTC 121 TCCACATTCT TCATTTAATC TTCAACAACT TGCTTCTCTT CTTCTTAATC TCCTTTGTAA 181 AATTTATGTC TCAACCATAG AAAACCTCTC TGAAACAATT TCTCCAACAA AATCTTCATT 241 ACTGTCAAAA AGATTGCGGC TAGAACCTAC CACCTGTCAA GATGAACCAC CACCCTCTTT 301 CTAACCTGGT CCAATAATCG ATTATCGAAC CACTGAACCT GACCTCTGTC ATTAAATGGC 361 TCTAATACCC ACTTGTTAGG ATCGAAATAA GCAGGTGTAA ATGCGGAAGC TAGCAAAGCA 421 AACTTCGAAA GACCACGAGT AAGAAGACAA CGAGAAATAT ACCAAAAGAC ACCAAAGATT 481 TAACGTGGTT CGGTCAATCG ACCTACGTTC ACAAAGGAGA TGAGCAATCC ACTATAAATA 541 TGAGAGTACA ATATACAGAG AGAAACAACA TCAACCAATT CATTCGGAAT ATATG Predicted gene structure (within gDNA segment 15547 to 22139): Exon 1 20912 21133 ( 222 n); cDNA 373 595 ( 223 n); score: 0.901 MATCH C08HBa0294K15.1+ SGN-E271645+ 0.901 222 0.373 C PGS_C08HBa0294K15.1+_SGN-E271645+ (20912 21133) Alignment (genomic DNA sequence = upper lines): TTGTTAGGAC CGGAAATAAG AAGGTGTAAA CGCGGAAGCT AGCAAAGCAA ACCTCAAAAG 20971 ||||||||| | |||||||| ||||||||| ||||||||| |||||||||| || || |||| TTGTTAGGAT C-GAAATAAG CAGGTGTAAA TGCGGAAGCT AGCAAAGCAA ACTTCGAAAG 431 ACCACGAGTA AGAATA-AAC GAGAAATATA TCAAAAGACA -CAAAGATTT AACGTGATTC 21029 |||||||||| |||| | ||| |||||||||| ||||||||| ||||||||| |||||| ||| ACCACGAGTA AGAAGACAAC GAGAAATATA CCAAAAGACA CCAAAGATTT AACGTGGTTC 491 GGTCAATCGA CCTACGTCCA CAAAGGAGAT GAGCAATCCA CTATAAATAT GAGAGTACAA 21089 |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| GGTCAATCGA CCTACGTTCA CAAAGGAGAT GAGCAATCCA CTATAAATAT GAGAGTACAA 551 AATACAGAGA AAAACAACCT CAATCAATTC ACTCGAAATA CATG 21133 ||||||||| ||||||| | ||| |||||| | ||| |||| ||| TATACAGAGA GAAACAACAT CAACCAATTC ATTCGGAATA TATG 595 hqPGS_C08HBa0294K15.1+_SGN-E271645+ (20912 21133) ******************************************************************************** EST sequence 84 -strand 747 n (File: SGN-E211090-) 1 CCCATATCAA CGGCTGGATT CAAGCTCTGC CCACAGTCGT AAATAATATC AGATTGCAAA 61 ATGGTAGTCT CTCCGGTCAG GATATCAATC TCCACCTCAC TGACAGCAGC ACCAAAGTTC 121 AAATAACTCG TAAAATCAGA TTCTGGTACA TAATAAGAAT TTGCTGCTAA GTTTACTGAT 181 TCCATTTGTG CCTGCAAAAA GAAGGGGGTG GAGGGACAGA ACTGCAAACT CAGATATGTT 241 AGGACCGAAA ATAAGCAGGT GTAAACGCGG AAGCTAGCAA TACAAACCTC GAAAGACCAC 301 GAGTAAGAAG ACAACGAGAA ATATATCAAA AGACACAAAG ATTTAACGTG GTTCGGTCAA 361 TCAACCTACG TCCACAAAGG AGATGAGCAA TCCACTATAA ATATAAGAGT ACAAAATACA 421 GAGAGAAACA ACCTCAACCA ATTCACTCAG AATACATGGG AGGTTCACAC AAGTGATAAC 481 ATATCAAGCT TGTGACCCAC AGATTCTCCC TCTAACCAAA ACTCTCAAAG CCTGTAAGAC 541 TACATTGTGA ATGCTGATTA AGTTAAAAGG AATATTCATC TATTTATAGA GTCCTAAACC 601 TTTTCCTACA AGAAAAGGAT TAGTCAATTC AAAACCTTTT CCTAAAAGGA AAACCTATTT 661 ATGGTAAGAA ATCAGGGCAA ATAAAATCCA ACAAGATACT TAAAAGATGA GCAAGAGTGG 721 CTAATGGATT TAAATTAACA AATTGTT Predicted gene structure (within gDNA segment 17763 to 22695): Exon 1 20919 21350 ( 432 n); cDNA 243 676 ( 434 n); score: 0.902 MATCH C08HBa0294K15.1+ SGN-E211090- 0.902 432 0.578 C PGS_C08HBa0294K15.1+_SGN-E211090- (20919 21350) Alignment (genomic DNA sequence = upper lines): GACCGGAAAT AAGAAGGTGT AAACGCGGAA GCTAGCAAAG CAAACCTCAA AAGACCACGA 20978 ||||| |||| ||| |||||| |||||||||| |||||||| |||||||| | |||||||||| GACCGAAAAT AAGCAGGTGT AAACGCGGAA GCTAGCAATA CAAACCTCGA AAGACCACGA 302 GTAAGAATA- AACGAGAAAT ATATCAAAAG ACACAAAGAT TTAACGTGAT TCGGTCAATC 21037 ||||||| | |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| GTAAGAAGAC AACGAGAAAT ATATCAAAAG ACACAAAGAT TTAACGTGGT TCGGTCAATC 362 GACCTACGTC CACAAAGGAG ATGAGCAATC CACTATAAAT ATGAGAGTAC AAAATACAGA 21097 ||||||||| |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| AACCTACGTC CACAAAGGAG ATGAGCAATC CACTATAAAT ATAAGAGTAC AAAATACAGA 422 GAAAAACAAC CTCAATCAAT TCACTCGAAA TACATGCGAG GTT--CACAA GTGATAACAT 21155 || ||||||| ||||| |||| |||||| || |||||| ||| ||| ||||| |||||||||| GAGAAACAAC CTCAACCAAT TCACTCAGAA TACATGGGAG GTTCACACAA GTGATAACAT 482 ATCAAGCTTG TAACCCATAA ATTCTCCACC TAACCAAAAC TCTCAAAGCA TTTAAGACTA 21215 |||||||||| | ||||| | ||||||| | |||||||||| ||||||||| | |||||||| ATCAAGCTTG TGACCCACAG ATTCTCCCTC TAACCAAAAC TCTCAAAGCC TGTAAGACTA 542 CATTGTGAAT GCTGATTAAG TTAGAAGAAA CATGCCTCTA TTTATAGAGT CCTAAACTTT 21275 |||||||||| |||||||||| ||| ||| || || | |||| |||||||||| ||||||| || CATTGTGAAT GCTGATTAAG TTAAAAGGAA TATTCATCTA TTTATAGAGT CCTAAACCTT 602 TTCCTACCAG AAAAATATTA GTCATTCCAA AACTTTTTCC TAAAAGGAAA ACCTATTTAT 21335 ||||||| || |||| |||| |||| | ||| ||| |||||| |||||||||| |||||||||| TTCCTACAAG AAAAGGATTA GTCAATTCAA AACCTTTTCC TAAAAGGAAA ACCTATTTAT 662 GGTAAGAAAT TTAGG 21350 ||||||||| | ||| GGTAAGAAA- TCAGG 676 hqPGS_C08HBa0294K15.1+_SGN-E211090- (20919 21350) ******************************************************************************** EST sequence 21 +strand 574 n (File: SGN-E206285+) 1 AACTAAGTAG AGCTATGTAT ATTTTGTCTG CAGAAGCAAG GGCTTAATTT ACAACTATAG 61 GTGGCGTACG TATAATGCAT GGACCGAAAA ATAAGCAGGT GTAAACGCGG AAGCTAGCAA 121 TGCTAACATC GAAAGACCAC GAGTAAGAAG ACAACGAGAA ATATACCAAA AGACACAAAG 181 ATTTAACGTG GTTCGGTCAA TCGACCTATG TCCACAAAGG AGATGAGCAA TCCACTATAA 241 ATATGAGAGT ACAAAATACA GAGGGAAACA ATCTCAACCA ATTCACTCAG AATACATGGG 301 AGGTTCACAC AAGTAATAAC GTATCAAGCT TGTGACCCAC AAATTCTCCC TCTAACCAAA 361 ACTCTCAAAG CCCTTAAGAC TACATTGTGA ATGTTAACTA AGTTAAAAGG AACATGCCTC 421 TATTTATAGA ATCCTAAACC TTTCCCTACA AGAAAAGGAT TAGTCAATCC AAAACCTTTT 481 CCTACAAGGA AAATCTATTT ATGGTAAGAA ATTTAGAGCA AATAAAACCC AACAAACATC 541 TATGATACGT GAACTTGCTT GGCCCTATAT GTTT Predicted gene structure (within gDNA segment 19373 to 23313): Exon 1 20919 21349 ( 431 n); cDNA 82 516 ( 435 n); score: 0.884 MATCH C08HBa0294K15.1+ SGN-E206285+ 0.884 431 0.751 C PGS_C08HBa0294K15.1+_SGN-E206285+ (20919 21349) Alignment (genomic DNA sequence = upper lines): GACCGGAAA- TAAGAAGGTG TAAACGCGGA AGCTAGCAAA GCAAACCTCA AAAGACCACG 20977 ||||| ||| |||| ||||| |||||||||| ||||||||| || ||| || |||||||||| GACCGAAAAA TAAGCAGGTG TAAACGCGGA AGCTAGCAAT GCTAACATCG AAAGACCACG 141 AGTAAGAATA -AACGAGAAA TATATCAAAA GACACAAAGA TTTAACGTGA TTCGGTCAAT 21036 |||||||| | ||||||||| |||| ||||| |||||||||| ||||||||| |||||||||| AGTAAGAAGA CAACGAGAAA TATACCAAAA GACACAAAGA TTTAACGTGG TTCGGTCAAT 201 CGACCTACGT CCACAAAGGA GATGAGCAAT CCACTATAAA TATGAGAGTA CAAAATACAG 21096 ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGACCTATGT CCACAAAGGA GATGAGCAAT CCACTATAAA TATGAGAGTA CAAAATACAG 261 AGAAAAACAA CCTCAATCAA TTCACTCGAA ATACATGCGA GGTT--CACA AGTGATAACA 21154 || |||||| ||||| ||| ||||||| | ||||||| || |||| |||| ||| ||||| AGGGAAACAA TCTCAACCAA TTCACTCAGA ATACATGGGA GGTTCACACA AGTAATAACG 321 TATCAAGCTT GTAACCCATA AATTCTCCAC CTAACCAAAA CTCTCAAAGC ATTTAAGACT 21214 |||||||||| || ||||| | |||||||| |||||||||| |||||||||| |||||||| TATCAAGCTT GTGACCCACA AATTCTCCCT CTAACCAAAA CTCTCAAAGC CCTTAAGACT 381 ACATTGTGAA TGCTGATTAA GTTAGAAGAA ACATGCCTCT ATTTATAGAG TCCTAAACTT 21274 |||||||||| || | | ||| |||| ||| | |||||||||| ||||||||| |||||||| | ACATTGTGAA TGTTAACTAA GTTAAAAGGA ACATGCCTCT ATTTATAGAA TCCTAAACCT 441 TTTCCTACCA GAAAAATATT AGTCATTCCA AAACTTTTTC CTAAAAGGAA AACCTATTTA 21334 || ||||| | ||||| ||| ||||| |||| |||| ||||| ||| |||||| || ||||||| TTCCCTACAA GAAAAGGATT AGTCAATCCA AAACCTTTTC CTACAAGGAA AATCTATTTA 501 TGGTAAGAAA TTTAG 21349 |||||||||| ||||| TGGTAAGAAA TTTAG 516 hqPGS_C08HBa0294K15.1+_SGN-E206285+ (20919 21349) ******************************************************************************** EST sequence 22 +strand 344 n (File: SGN-E206496+) 1 AACTAAGTAG AGCTATGTAT ATTTTGTCTG CAGAAGCAAT GGCTTAATTT ACAACTATAG 61 GTGGCGTACG TATAATGCAT GGACCGAAAA ATAAGCAGGT GTAAACGCGG AAGCTAGCAA 121 TGCTAACATC GAAAGACCAC GAGTAAGAAG ACAACGAGAA ATATACCAAA AGACACAAAG 181 ATTTAACGTG GTTCGGTCAA TCGACCTATG TCCACAAAGG AGATGAGCAA TCCACTATAA 241 ATATGAGAGT ACAAAATACA GAGGGAAACA ATCTCAACCA ATTCACTCAG AATACATGGG 301 AGGTTCACAC AAGTAATAAC GTATCAAGCT TGTGACCCAC AAAT Predicted gene structure (within gDNA segment 19373 to 22518): Exon 1 20919 21177 ( 259 n); cDNA 82 344 ( 263 n); score: 0.880 MATCH C08HBa0294K15.1+ SGN-E206496+ 0.880 259 0.753 C PGS_C08HBa0294K15.1+_SGN-E206496+ (20919 21177) Alignment (genomic DNA sequence = upper lines): GACCGGAAA- TAAGAAGGTG TAAACGCGGA AGCTAGCAAA GCAAACCTCA AAAGACCACG 20977 ||||| ||| |||| ||||| |||||||||| ||||||||| || ||| || |||||||||| GACCGAAAAA TAAGCAGGTG TAAACGCGGA AGCTAGCAAT GCTAACATCG AAAGACCACG 141 AGTAAGAATA -AACGAGAAA TATATCAAAA GACACAAAGA TTTAACGTGA TTCGGTCAAT 21036 |||||||| | ||||||||| |||| ||||| |||||||||| ||||||||| |||||||||| AGTAAGAAGA CAACGAGAAA TATACCAAAA GACACAAAGA TTTAACGTGG TTCGGTCAAT 201 CGACCTACGT CCACAAAGGA GATGAGCAAT CCACTATAAA TATGAGAGTA CAAAATACAG 21096 ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGACCTATGT CCACAAAGGA GATGAGCAAT CCACTATAAA TATGAGAGTA CAAAATACAG 261 AGAAAAACAA CCTCAATCAA TTCACTCGAA ATACATGCGA GGTT--CACA AGTGATAACA 21154 || |||||| ||||| ||| ||||||| | ||||||| || |||| |||| ||| ||||| AGGGAAACAA TCTCAACCAA TTCACTCAGA ATACATGGGA GGTTCACACA AGTAATAACG 321 TATCAAGCTT GTAACCCATA AAT 21177 |||||||||| || ||||| | ||| TATCAAGCTT GTGACCCACA AAT 344 hqPGS_C08HBa0294K15.1+_SGN-E206496+ (20919 21177) ******************************************************************************** EST sequence 45 +strand 349 n (File: SGN-E207598+) 1 GAAAAGAAAC TAAGTAGAGC TATGTATATT TTGTCTGCAG AAGCAATGGC TTAATTTACA 61 ACTATAGGTG GCGTACGTAT AATGCATGGA CCGAAAAATA AGCAGGTGTA AACGCGGAAG 121 CTAGCAATGC TAACATCGAA AGACCACGAG TTAGAAGACA ACGAGAAATA TACCAAAAGA 181 CACAAAGATT TAACGTGGGT CGGTCAATCG ACCTATGTCC ACAAAGGAGA TGAGCAATCC 241 ACTATTAATA TGAGAGTACA AAATACAGAG GGAAACAATC TCAACCAATT CACTCAGAAT 301 ACATGGGAGG GTCACACAAG TAATAACGTA TCAAGCTTGT GACCCACAA Predicted gene structure (within gDNA segment 18672 to 22498): Exon 1 20919 21175 ( 257 n); cDNA 89 349 ( 261 n); score: 0.864 MATCH C08HBa0294K15.1+ SGN-E207598+ 0.864 257 0.736 C PGS_C08HBa0294K15.1+_SGN-E207598+ (20919 21175) Alignment (genomic DNA sequence = upper lines): GACCGGAA-A TAAGAAGGTG TAAACGCGGA AGCTAGCAAA GCAAACCTCA AAAGACCACG 20977 ||||| || | |||| ||||| |||||||||| ||||||||| || ||| || |||||||||| GACCGAAAAA TAAGCAGGTG TAAACGCGGA AGCTAGCAAT GCTAACATCG AAAGACCACG 148 AGTAAGAATA -AACGAGAAA TATATCAAAA GACACAAAGA TTTAACGTGA TTCGGTCAAT 21036 ||| |||| | ||||||||| |||| ||||| |||||||||| ||||||||| ||||||||| AGTTAGAAGA CAACGAGAAA TATACCAAAA GACACAAAGA TTTAACGTGG GTCGGTCAAT 208 CGACCTACGT CCACAAAGGA GATGAGCAAT CCACTATAAA TATGAGAGTA CAAAATACAG 21096 ||||||| || |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| CGACCTATGT CCACAAAGGA GATGAGCAAT CCACTATTAA TATGAGAGTA CAAAATACAG 268 AGAAAAACAA CCTCAATCAA TTCACTCGAA ATACATGCGA -GGT-TCACA AGTGATAACA 21154 || |||||| ||||| ||| ||||||| | ||||||| || ||| |||| ||| ||||| AGGGAAACAA TCTCAACCAA TTCACTCAGA ATACATGGGA GGGTCACACA AGTAATAACG 328 TATCAAGCTT GTAACCCATA A 21175 |||||||||| || ||||| | | TATCAAGCTT GTGACCCACA A 349 hqPGS_C08HBa0294K15.1+_SGN-E207598+ (20919 21175) ******************************************************************************** EST sequence 9 +strand 667 n (File: SGN-E389613+) 1 TACATTACTG CAATCTCCAA ATCCAGCCAT AGATCCTTAG CATTGGACCA TTGGTAAAAG 61 TATTTAGTTA CAGATCCTTT TTTGCCTTTG GCAGCACTAA CTTATATACC TAATTAATTT 121 TGCCCCACAA TATGAAATGA GATAGCTTGC ATGCAACGCG TACCTGCTAC CTTCCACCAT 181 CACAAATCCA TAACCTGATA GTAATGAGTC AATGGAACCT TGACGGTGTT AGGACCAAAA 241 ATAAGCAGGT GTAAACGCGG AAGCTAGCAA AGCAAACCTC AAAAGACCAC GAGTAAGAAG 301 ACAACGAGAA ATATACCAAA AGATACAGAG ATTTAACGTG GTTCGGTCAA TTGACCTACG 361 TCCACAAAGG AGATGAGCAA TCCATTATAA ATATGAGAAT ACAAAATACA GAGAGAAACA 421 ACCTCAACCA AATTCACTCA GAATACATGA GAGATTCACA CAAGTGATAA CGTATCAAGA 481 AGCTTGTGAC TCATACCTCA ACGCATTATG TATGTGCAAA TCACAGGAGG AATGTACATT 541 CATGATCAGT TAAAAGTTAT AATAGAACAG GCAGAATAAA AGCAAAATAG AACATGATAA 601 TAATTTGTTA GAAACATTCT TGTACTCATC CAAATTAGTT GCAATGATTA CCTATTAGTA 661 ATATGAG Predicted gene structure (within gDNA segment 17873 to 24509): Exon 1 20919 21160 ( 242 n); cDNA 233 478 ( 246 n); score: 0.884 MATCH C08HBa0294K15.1+ SGN-E389613+ 0.884 242 0.363 C PGS_C08HBa0294K15.1+_SGN-E389613+ (20919 21160) Alignment (genomic DNA sequence = upper lines): GACCGGAAAT AAGAAGGTGT AAACGCGGAA GCTAGCAAAG CAAACCTCAA AAGACCACGA 20978 |||| |||| ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCAAAAAT AAGCAGGTGT AAACGCGGAA GCTAGCAAAG CAAACCTCAA AAGACCACGA 292 GTAAGAATA- AACGAGAAAT ATATCAAAAG ACACAAAGAT TTAACGTGAT TCGGTCAATC 21037 ||||||| | |||||||||| ||| |||||| | ||| |||| |||||||| | ||||||||| GTAAGAAGAC AACGAGAAAT ATACCAAAAG ATACAGAGAT TTAACGTGGT TCGGTCAATT 352 GACCTACGTC CACAAAGGAG ATGAGCAATC CACTATAAAT ATGAGAGTAC AAAATACAGA 21097 |||||||||| |||||||||| |||||||||| || ||||||| |||||| ||| |||||||||| GACCTACGTC CACAAAGGAG ATGAGCAATC CATTATAAAT ATGAGAATAC AAAATACAGA 412 GAAAAACAAC CTCAATC-AA TTCACTCGAA ATACATGCGA GGTT--CACA AGTGATAACA 21154 || ||||||| ||||| | || ||||||| | ||||||| || | || |||| ||||||||| GAGAAACAAC CTCAACCAAA TTCACTCAGA ATACATGAGA GATTCACACA AGTGATAACG 472 TATCAA 21160 |||||| TATCAA 478 hqPGS_C08HBa0294K15.1+_SGN-E389613+ (20919 21160) ******************************************************************************** EST sequence 5 +strand 302 n (File: SGN-E370622+) 1 TTTTTTTTTT TGATAACCTA GAAATATGCC TATGACCCGC CCCTTTGGAC TAATCACAAC 61 CTTCTAAACT CGGTGGATAA TGTTAGGACC GAAAATAAGC AGGTGTAAAC GCGGAAGCTA 121 GCAACGCAAA CCTCAAAATA CCACGAGTAA GACGACAACG AGAAATATAC CAAAAGACAC 181 AAAGATTTAA CGTGGTTCGG TCAATCGACC TACGTCCACA AAGGAGATGA GCAATCTACT 241 ATAAATATGA GAGTACAAAA TACAGAGAGA AACAACCTCA ACCAATTCAC TCGGAATACA 301 TG Predicted gene structure (within gDNA segment 18702 to 22049): Exon 1 20919 21133 ( 215 n); cDNA 87 302 ( 216 n); score: 0.933 PPA cDNA 11 1 MATCH C08HBa0294K15.1+ SGN-E370622+ 0.933 215 0.712 C PGS_C08HBa0294K15.1+_SGN-E370622+ (20919 21133) Alignment (genomic DNA sequence = upper lines): GACCGGAAAT AAGAAGGTGT AAACGCGGAA GCTAGCAAAG CAAACCTCAA AAGACCACGA 20978 ||||| |||| ||| |||||| |||||||||| |||||||| | |||||||||| || ||||||| GACCGAAAAT AAGCAGGTGT AAACGCGGAA GCTAGCAACG CAAACCTCAA AATACCACGA 146 GTAAGAATA- AACGAGAAAT ATATCAAAAG ACACAAAGAT TTAACGTGAT TCGGTCAATC 21037 |||||| | |||||||||| ||| |||||| |||||||||| |||||||| | |||||||||| GTAAGACGAC AACGAGAAAT ATACCAAAAG ACACAAAGAT TTAACGTGGT TCGGTCAATC 206 GACCTACGTC CACAAAGGAG ATGAGCAATC CACTATAAAT ATGAGAGTAC AAAATACAGA 21097 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| GACCTACGTC CACAAAGGAG ATGAGCAATC TACTATAAAT ATGAGAGTAC AAAATACAGA 266 GAAAAACAAC CTCAATCAAT TCACTCGAAA TACATG 21133 || ||||||| ||||| |||| ||||||| || |||||| GAGAAACAAC CTCAACCAAT TCACTCGGAA TACATG 302 hqPGS_C08HBa0294K15.1+_SGN-E370622+ (20919 21133) ******************************************************************************** EST sequence 101 -strand 490 n (File: SGN-E205772-) 1 GGTGTAAACG CGGAAGCTAG CAATACAAAC CTCGAAAGAC CACGAGTAAG AAGACAACGA 61 GAAATATATC AAAAGACACA AAGATTTAAC GTGGTTCGGT CAATCAACCT ACGTCCACAA 121 AGGAGATGAG CAATCCACTA TAAATATAAG AGTACAAAAT ACAGAGAGAA TCAACCTCAA 181 CCAATTCACT CAGAATACAT GGGAGGTTCA CACAAGTGAT AACATATCAA GCTTGTGACC 241 CACAGATTCT CCCTCTAACC AAAACTCTCA AAGCCTGTAA GAGTACATTG TGAATGCTGA 301 TTAAGTTAAA AGGAATATTC ATCTATTTAT AGAGTCCTAA ACCTTTTCCT ACAAGAAAAG 361 GATTAGTCAA TTCAAAACCT TTTCCTAAAA GGAAAACCTA TTTATGGTAA GAAATCAGGG 421 CAAATAAAAT CCAACAAGAT ACTTAAAAGA TGAGCAAGAG TGGCTAATGG ATTTAAATTA 481 ACAAATTGTT Predicted gene structure (within gDNA segment 20324 to 22695): Exon 1 20934 21350 ( 417 n); cDNA 1 419 ( 419 n); score: 0.898 MATCH C08HBa0294K15.1+ SGN-E205772- 0.898 417 0.851 C PGS_C08HBa0294K15.1+_SGN-E205772- (20934 21350) Alignment (genomic DNA sequence = upper lines): GGTGTAAACG CGGAAGCTAG CAAAGCAAAC CTCAAAAGAC CACGAGTAAG AATA-AACGA 20992 |||||||||| |||||||||| ||| ||||| ||| |||||| |||||||||| || | ||||| GGTGTAAACG CGGAAGCTAG CAATACAAAC CTCGAAAGAC CACGAGTAAG AAGACAACGA 60 GAAATATATC AAAAGACACA AAGATTTAAC GTGATTCGGT CAATCGACCT ACGTCCACAA 21052 |||||||||| |||||||||| |||||||||| ||| |||||| ||||| |||| |||||||||| GAAATATATC AAAAGACACA AAGATTTAAC GTGGTTCGGT CAATCAACCT ACGTCCACAA 120 AGGAGATGAG CAATCCACTA TAAATATGAG AGTACAAAAT ACAGAGAAAA ACAACCTCAA 21112 |||||||||| |||||||||| ||||||| || |||||||||| ||||||| || ||||||||| AGGAGATGAG CAATCCACTA TAAATATAAG AGTACAAAAT ACAGAGAGAA TCAACCTCAA 180 TCAATTCACT CGAAATACAT GCGAGGTT-- CACAAGTGAT AACATATCAA GCTTGTAACC 21170 ||||||||| | ||||||| | |||||| |||||||||| |||||||||| |||||| ||| CCAATTCACT CAGAATACAT GGGAGGTTCA CACAAGTGAT AACATATCAA GCTTGTGACC 240 CATAAATTCT CCACCTAACC AAAACTCTCA AAGCATTTAA GACTACATTG TGAATGCTGA 21230 || | ||||| || |||||| |||||||||| |||| | ||| || ||||||| |||||||||| CACAGATTCT CCCTCTAACC AAAACTCTCA AAGCCTGTAA GAGTACATTG TGAATGCTGA 300 TTAAGTTAGA AGAAACATGC CTCTATTTAT AGAGTCCTAA ACTTTTTCCT ACCAGAAAAA 21290 |||||||| | || || || | ||||||||| |||||||||| || ||||||| || |||||| TTAAGTTAAA AGGAATATTC ATCTATTTAT AGAGTCCTAA ACCTTTTCCT ACAAGAAAAG 360 TATTAGTCAT TCCAAAACTT TTTCCTAAAA GGAAAACCTA TTTATGGTAA GAAATTTAGG 21350 |||||||| | |||||| | |||||||||| |||||||||| |||||||||| |||| | ||| GATTAGTCAA TTCAAAACCT TTTCCTAAAA GGAAAACCTA TTTATGGTAA GAAA-TCAGG 419 hqPGS_C08HBa0294K15.1+_SGN-E205772- (20934 21350) ******************************************************************************** EST sequence 102 -strand 456 n (File: SGN-E205773-) 1 AAAGACCACG AGTAAGAAGC CATCGAGAAA TATATCAAAA GACACAAAGA TTTAACGTGG 61 TTCGGTCAAT CAACCTACGT CCACAAAGTA GATGAGCAAT CCACTATAAA TATAAGAGTA 121 CAAAATACAG AGAGAAACAG CTTCAACCAA TTCACTCAGA ATACATGGTA GGTTCACACA 181 AGTGATAACA TATCAAGCTT GTGACCCACA GATTCTCCCT CTAACCAAAA CTCTCAAAGC 241 CTGTAAGACT ACATTGTGAA TGCTGATTAA GTTAAAAGGA ATATTCATCT ATTTATAGAG 301 TCCTAAACCT TTTCCTACAA GAAAAGGATT AGTCAATTCA AAACCTTTTC CTAAAAGGAA 361 AACCTATTTA TGGTAAGAAA TCAGGGCAAA TAAAATCCAA CAAGATACTT AAAAGATGAG 421 CAAGAGTGGC TAATGGATTT AAATTAACTA ATTGTT Predicted gene structure (within gDNA segment 20358 to 22695): Exon 1 20968 21350 ( 383 n); cDNA 1 385 ( 385 n); score: 0.886 MATCH C08HBa0294K15.1+ SGN-E205773- 0.886 383 0.840 C PGS_C08HBa0294K15.1+_SGN-E205773- (20968 21350) Alignment (genomic DNA sequence = upper lines): AAAGACCACG AGTAAGAA-T AAACGAGAAA TATATCAAAA GACACAAAGA TTTAACGTGA 21026 |||||||||| |||||||| | ||||||| |||||||||| |||||||||| ||||||||| AAAGACCACG AGTAAGAAGC CATCGAGAAA TATATCAAAA GACACAAAGA TTTAACGTGG 60 TTCGGTCAAT CGACCTACGT CCACAAAGGA GATGAGCAAT CCACTATAAA TATGAGAGTA 21086 |||||||||| | |||||||| |||||||| | |||||||||| |||||||||| ||| |||||| TTCGGTCAAT CAACCTACGT CCACAAAGTA GATGAGCAAT CCACTATAAA TATAAGAGTA 120 CAAAATACAG AGAAAAACAA CCTCAATCAA TTCACTCGAA ATACATGCGA GGTT--CACA 21144 |||||||||| ||| ||||| | |||| ||| ||||||| | ||||||| | |||| |||| CAAAATACAG AGAGAAACAG CTTCAACCAA TTCACTCAGA ATACATGGTA GGTTCACACA 180 AGTGATAACA TATCAAGCTT GTAACCCATA AATTCTCCAC CTAACCAAAA CTCTCAAAGC 21204 |||||||||| |||||||||| || ||||| | ||||||| |||||||||| |||||||||| AGTGATAACA TATCAAGCTT GTGACCCACA GATTCTCCCT CTAACCAAAA CTCTCAAAGC 240 ATTTAAGACT ACATTGTGAA TGCTGATTAA GTTAGAAGAA ACATGCCTCT ATTTATAGAG 21264 | ||||||| |||||||||| |||||||||| |||| ||| | | || | ||| |||||||||| CTGTAAGACT ACATTGTGAA TGCTGATTAA GTTAAAAGGA ATATTCATCT ATTTATAGAG 300 TCCTAAACTT TTTCCTACCA GAAAAATATT AGTCATTCCA AAACTTTTTC CTAAAAGGAA 21324 |||||||| | |||||||| | ||||| ||| ||||| | || |||| ||||| |||||||||| TCCTAAACCT TTTCCTACAA GAAAAGGATT AGTCAATTCA AAACCTTTTC CTAAAAGGAA 360 AACCTATTTA TGGTAAGAAA TTTAGG 21350 |||||||||| |||||||||| | ||| AACCTATTTA TGGTAAGAAA -TCAGG 385 hqPGS_C08HBa0294K15.1+_SGN-E205773- (20968 21350) ******************************************************************************** EST sequence 25 +strand 535 n (File: SGN-E243194+) 1 AAAAGACATA AAGATTTAAC GTGGTTCGGT CAATCGACCT ACGTCCACAA AGGAGATGAG 61 CAATCCACTA TAAATATGAG AGTACAAAAT ACAGAGGGAA ACAACCTCAA CCAATTCACT 121 CAGAATACAT GGGAGGTTCA CACAAGTGAT AACGTATCAA GCTTGTGACC CACAAATTCT 181 CCCTCTAACC AAAACTCTCA AAGCACTTAA GACTACATTT TGAATGCTGA TTAAGTTAGA 241 AGAAAAATGC CTCTATTTAT GGAGTCCTAA ACCTTTTCCT ACAAGAAAAG GATTAGTCAA 301 TCCAAAACCT TTTCCTACAA GAAAAGGATT AGTCAATCCA AAACCTTTTC CTACAAGGAA 361 AACCTATTTA TGGTAAGAAA TTTAGGGCAA ATAAAACCCA ACAAGTCTCC CCCTTGGCCT 421 GAATTTCTGA CAAATAAACT TGTCCACCTT CTTCACTTAA TCTTCAACAA CTTGCTTCTC 481 CTCTCCATAA TCTCCTTTGC AAAATTTATG TCTCAACACA AAGAATCTCT CTGAA Predicted gene structure (within gDNA segment 20187 to 23378): Exon 1 21003 21332 ( 330 n); cDNA 1 330 ( 330 n); score: 0.900 MATCH C08HBa0294K15.1+ SGN-E243194+ 0.900 330 0.617 C PGS_C08HBa0294K15.1+_SGN-E243194+ (21003 21332) Alignment (genomic DNA sequence = upper lines): AAAAGACACA AAGATTTAAC GTGATTCGGT CAATCGACCT ACGTCCACAA AGGAGATGAG 21062 |||||||| | |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| AAAAGACATA AAGATTTAAC GTGGTTCGGT CAATCGACCT ACGTCCACAA AGGAGATGAG 60 CAATCCACTA TAAATATGAG AGTACAAAAT ACAGAGAAAA ACAACCTCAA TCAATTCACT 21122 |||||||||| |||||||||| |||||||||| |||||| || |||||||||| ||||||||| CAATCCACTA TAAATATGAG AGTACAAAAT ACAGAGGGAA ACAACCTCAA CCAATTCACT 120 CGAAATACAT GCGAGGTT-- CACAAGTGAT AACATATCAA GCTTGTAACC CATAAATTCT 21180 | ||||||| | |||||| |||||||||| ||| |||||| |||||| ||| || ||||||| CAGAATACAT GGGAGGTTCA CACAAGTGAT AACGTATCAA GCTTGTGACC CACAAATTCT 180 CCACCTAACC AAAACTCTCA AAGCATTTAA GACTACATTG TGAATGCTGA TTAAGTTAGA 21240 || |||||| |||||||||| ||||| |||| ||||||||| |||||||||| |||||||||| CCCTCTAACC AAAACTCTCA AAGCACTTAA GACTACATTT TGAATGCTGA TTAAGTTAGA 240 AGAAACATGC CTCTATTTAT AGAGTCCTAA ACTTTTTCCT ACCAGAAAAA TATTAGTCAT 21300 ||||| |||| |||||||||| ||||||||| || ||||||| || |||||| |||||||| AGAAAAATGC CTCTATTTAT GGAGTCCTAA ACCTTTTCCT ACAAGAAAAG GATTAGTCAA 300 TCCAAAACTT TTTCCTAAAA GGAAAACCTA TT 21332 |||||||| | ||||||| || ||||| | || TCCAAAACCT TTTCCTACAA -GAAAA-GGA TT 330 hqPGS_C08HBa0294K15.1+_SGN-E243194+ (21003 21332) ******************************************************************************** EST sequence 148 +strand 491 n (File: SGN-E275314+) 1 CAGAAGCAAG ATTGGTTTTT TATATGAAAA GGGATTTCCA AAGCCCACGA ACGAGTTGGA 61 ACTTGATGCC TGGAAAGCAA ACAACTCAAT TATATGTTCA TGGATTTTTA ACAGTGCCGA 121 CGAGACAATT CAGCCAAGTA TCGTCTCTCA CAAAATTGCC CACGAATTAT GGACTGATAT 181 AACGGCAAGG TACGGAGGCA CGAATGCTCC AAAATCGTGG CAATTAAAGT CCGATCTACA 241 AATGTTAAGA CAAAAAGGTC AATTTGTAGT CTCGTACTAC AATCAGTTTA TAACTATTTG 301 GAACCAATTG TATGGTTCGA TTGATCCAAC TTATGGGTGT ATATGTCCTG CAGCAGCGAA 361 AATGCGTCTT CGATTTGAGG AGGAGAAAAC AAATGCGTTT CTTCTCGGAC TCGATGATAC 421 ACAATTCGGA TCCACTCGTT CCCAGATTTT CGGCACCCGC CCACTTCCCG TTCTTAATGA 481 AGCTTACTAT C Predicted gene structure (within gDNA segment 30298 to 25286): Exon 1 27321 26832 ( 490 n); cDNA 2 491 ( 490 n); score: 0.871 MATCH C08HBa0294K15.1- SGN-E275314+ 0.871 490 0.998 C PGS_C08HBa0294K15.1-_SGN-E275314+ (27321 26832) Alignment (genomic DNA sequence = upper lines): AGAAGCAAGA TTGGTTTTCT ATATGAAAAG GGTTTTCCAA AGCCGACGAA CGTTTTGGAA 27262 |||||||||| |||||||| | |||||||||| || ||||||| |||| ||||| || |||||| AGAAGCAAGA TTGGTTTTTT ATATGAAAAG GGATTTCCAA AGCCCACGAA CGAGTTGGAA 61 CTTGATGCCT GGAAAGCGAA CAATTCCATC ATTTGTTCGT GGATTTTTAA CAGCGCCGAC 27202 |||||||||| ||||||| || ||| || || || ||||| | |||||||||| ||| |||||| CTTGATGCCT GGAAAGCAAA CAACTCAATT ATATGTTCAT GGATTTTTAA CAGTGCCGAC 121 GAGACGATCC AGCCGAGTCT CGTCGCTCAA AAAATTGCCC ACGAATTGTG GACCGATATG 27142 ||||| || | |||| ||| | |||| |||| |||||||||| ||||||| || ||| ||||| GAGACAATTC AGCCAAGTAT CGTCTCTCAC AAAATTGCCC ACGAATTATG GACTGATATA 181 AAGGCACGAT ATGGAGGCAC GAATGCTCCT AAATCGTGGC AGTTAAAGTC TGACCTACAA 27082 | |||| | | | |||||||| ||||||||| |||||||||| | |||||||| || |||||| ACGGCAAGGT ACGGAGGCAC GAATGCTCCA AAATCGTGGC AATTAAAGTC CGATCTACAA 241 ATGTTGAGGC AAAAAGGTCA GTCTGTAGTC TCGTACTACA ATCAGTTCAT CATTGTCTGG 27022 ||||| || | |||||||||| | ||||||| |||||||||| ||||||| || | | | ||| ATGTTAAGAC AAAAAGGTCA ATTTGTAGTC TCGTACTACA ATCAGTTTAT AACTATTTGG 301 AACCAATTGT ATGGTTCGAT TGATCCAACT TGCGGGTGTA TATGTCCTGC GGCTGCAAAA 26962 |||||||||| |||||||||| |||||||||| | ||||||| |||||||||| || || ||| AACCAATTGT ATGGTTCGAT TGATCCAACT TATGGGTGTA TATGTCCTGC AGCAGCGAAA 361 ATGCGTCTTC GATTTGAGGA GGAGAAGACG CAGGCGTTTC TCCTCGGGCT TGATGATGCT 26902 |||||||||| |||||||||| |||||| || | ||||||| | ||||| || |||||| | ATGCGTCTTC GATTTGAGGA GGAGAAAACA AATGCGTTTC TTCTCGGACT CGATGATACA 421 CAGTTCGGGG CGACTCGCTC TCAGATCTTC GGCACCCGCC CACTTCCTGT TCTCAACGAA 26842 || ||||| | ||||| || ||||| ||| |||||||||| ||||||| || ||| || ||| CAATTCGGAT CCACTCGTTC CCAGATTTTC GGCACCCGCC CACTTCCCGT TCTTAATGAA 481 GCCTACTATC 26832 || ||||||| GCTTACTATC 491 hqPGS_C08HBa0294K15.1-_SGN-E275314+ (27321 26832) ******************************************************************************** EST sequence 77 +strand 701 n (File: SGN-E578389+) 1 GAAAAACATA TATCTTATTG CTATACACTT ATAATTATGC AATATACATA CATTTTAATT 61 CGGTTCAATT ATATGCAAAG CAAATTTTAT AATAATATTG CAGCGAAATA GGCAGCGAAT 121 TATACAATTG TAGTTAAATA GGATAGCGAA TTATACAATT GCAGCGAAAT AGGCCAGCGA 181 ATTATACAAT TTAGGTCAGC GAATTATACA ATTTTATGTT TGCTATGGAG CGCAATTATG 241 CAAACTTTGT TATAGCATAC AAATATGAAT TTTTTGTTTG TTATATGTGA AAGTTGCCCA 301 TTAATTAAAG AGTCAATAAA ATAGCGGTCT AATCAAGTCC TAAGCAGCCC AAGGTTTGAC 361 CCGTCAACCC AAAAATGAAT AATATTATGG GAAAAGGGTA TGATATACCC CTCAACTTTG 421 TCATTTGAAA CTGATATACC CCTCGTTATG AAAGTGGCTC ATATATACCC TTACCGTTAT 481 ACAAATGGTT CACATATACC TCTGCCGTTA CAAAATGAGC TCATATATAC CCTTCATTTA 541 ACGAAAGTGA AAAAATTACT TTTAAATTTA TAATTTTACT TTAATTTTAA AAAAAAATAT 601 ATTTAGGGGC ATATATGATT CTTTTTTCAA AGTTCAAGGT ATATTTCAAA TTTTTTTAAT 661 ACATAAATTA TTTTTTTGAC TTATTTATTA TAATTATTTG A Predicted gene structure (within gDNA segment 29836 to 23677): Exon 1 29221 29162 ( 60 n); cDNA 84 140 ( 57 n); score: 0.767 Intron 1 29161 29010 ( 152 n); Pd: 0.000 (s: 0.78), Pa: 0.000 (s: 0.92) Exon 2 29009 28934 ( 76 n); cDNA 141 216 ( 76 n); score: 0.895 Intron 2 28933 28885 ( 49 n); Pd: 0.782 (s: 0.92), Pa: 0.000 (s: 0.92) Exon 3 28884 28792 ( 93 n); cDNA 217 309 ( 93 n); score: 0.860 Intron 3 28791 28180 ( 612 n); Pd: 0.000 (s: 0.82), Pa: 0.999 (s: 0.66) Exon 4 28179 28136 ( 44 n); cDNA 310 346 ( 37 n); score: 0.659 Intron 4 28135 26122 (2014 n); Pd: 0.000 (s: 0.66), Pa: 1.000 (s: 0) Exon 5 26121 26108 ( 14 n); cDNA 347 360 ( 14 n); score: 0.714 MATCH C08HBa0294K15.1- SGN-E578389+ 0.847 287 0.409 C PGS_C08HBa0294K15.1-_SGN-E578389+ (29221 29162,29009 28934,28884 28792,28179 28136,26121 26108) Alignment (genomic DNA sequence = upper lines): ATTTTACTTC AAATATTGCA GAGAAAAAGG CCAAAAAATT ATACAATTGT GAATTATACA 29162 |||||| | ||||||||| | |||| ||| || |||| |||||||||| | ||| | | ATTTTA-TAA TAATATTGCA GCGAAATAGG -CAGCGAATT ATACAATTGT -AGTTAAATA 140 ATTGCAGTGA AATACAATTT TTTCTAGTTT TATACAACAG AAGTGTATAT ATTGTGTTTC 29102 .......... .......... .......... .......... .......... .......... 140 TGTTTTTGTA TAAAGCGACA AAAACATATA TCTTCTTGCT ATACACTTAT AATTATGCAA 29042 .......... .......... .......... .......... .......... .......... 140 TATACATACA TTTTAATTCG ATTCAACTGT ATGCAAAGCT AATTATACAA TTGCGGCGAA 28982 | | ||| |||||||||| |||| ||||| .......... .......... .......... ..GGATAGCG AATTATACAA TTGCAGCGAA 168 ATAGGCCAGC GAATTATACA ATTTAAGCCA GCGAATTATA CAATTTAGGC CAGCGAATTA 28922 |||||||||| |||||||||| ||||| | || |||||||||| |||||| ATAGGCCAGC GAATTATACA ATTTAGGTCA GCGAATTATA CAATTTTA.. .......... 216 TACACTTTTA TATGTATAGC GAATTATACA GTTTTTATGT TTGCTATGGA GCGCAATTAT 28862 ||| |||||||||| |||||||||| .......... .......... .......... .......TGT TTGCTATGGA GCGCAATTAT 239 GCAAAGTTTG CTATATTATA CAAATATGAT TTTTTTGTTT GCTATATGTG AAAGTTGCCT 28802 ||||| |||| |||| ||| ||||||||| |||||||||| | |||||||| ||||||||| GCAAACTTTG TTATAGCATA CAAATATGAA TTTTTTGTTT GTTATATGTG AAAGTTGCCC 299 AAAAAAACGA GGAAAAAAAT TGGAAAAAAA AACGAGGAAA ATATTTGAAA AAAGAGGCTT 28742 | || | ATTAATTAAA .......... .......... .......... .......... .......... 309 AAAAGCTATT GCTAGCGAGA TTTGAACTCA CAAACAACTT AAATGCTTGA CTTTTTCAAG 28682 .......... .......... .......... .......... .......... .......... 309 GCTCCTTAAA TCACTAGGCT ACAACACCTT GTTATGTTAA AGGTGTCCAA ATTATATTAT 28622 .......... .......... .......... .......... .......... .......... 309 TTAACACTTT GTATATTATT TTACTTGCAT ATACGGTGTA ATTTGTTGAC GAAGGGTGTC 28562 .......... .......... .......... .......... .......... .......... 309 CAACAGTATA TAGCTATGCC CCTAGTCTTG CTTAGAGTGA TTGGTGTATT GTTATTGCAT 28502 .......... .......... .......... .......... .......... .......... 309 TAGTTATATT ACCATAATTC TTATATTTGA GATTCATTAT TATTTATCAT TGTTTTCAAT 28442 .......... .......... .......... .......... .......... .......... 309 AATTTATCCT AATATATGTT GTTTATTATG TACCGTTAAT TATATTATTT TCTTGTTCTT 28382 .......... .......... .......... .......... .......... .......... 309 TTGGTAGACT TTGCATTATT TTCTTTTTTA TTTTAGAAAA TTAATTTTAC ATTTACTAAA 28322 .......... .......... .......... .......... .......... .......... 309 ATTGAGCCAA AAATCTTTTG AAAGAAACTC TCTATCTTCG GTAAGTAATA ATATAATAAT 28262 .......... .......... .......... .......... .......... .......... 309 ATAATTTGAA TATATTTACT CTTCTTTGAG CTTTACTTAT AAAATTAACG GAATATGTTA 28202 .......... .......... .......... .......... .......... .......... 309 TTATTATTAT CATTACGAAC AGGAGGAAAC AAACAGCAGG CGGGTGGACT AAAGTCACAT 28142 ||| || ||| | | | | ||| | | ||||| | | .......... .......... ..GAGTCAAT AAA-A-TA-G C-GGTCTAAT CAAGTC-C-T 341 AAGACAACTG CACTTATTAT GTTCCTGTTG TCTTTTTCTT TTGTATTATA TTTATATTTA 28082 ||| || AAG-CA.... .......... .......... .......... .......... .......... 346 AATAAAATAA AATACAAAAA TGACTAAAGC CAAACCTAAA ATGAAATGGC CAAAGTCAAA 28022 .......... .......... .......... .......... .......... .......... 346 AACTTGCTGA AATTACTTGT AATTTTTCTT TTATTAAAAT AATAATAATT GTTTCTTCTT 27962 .......... .......... .......... .......... .......... .......... 346 TTATATTGTA TTATATAATT TCCGTAATTG TTTCTCTTTT TAGCGTGATT CTCCATTCAC 27902 .......... .......... .......... .......... .......... .......... 346 CTTTTACAAA AATACTGCAT AATATTCATT GGACTTGGAA CCATCTACTT TAATTTTTGT 27842 .......... .......... .......... .......... .......... .......... 346 TCCTTTTCTT TTCTAATTTT TGTAAATATT AATATAACAG TATTGTTGAC TGAGATTAGG 27782 .......... .......... .......... .......... .......... .......... 346 TTTAGACTTT GTTTACTGGG CTTCGGCCCA CTGTGATTAT ATAACTATAT ATATCTCGTT 27722 .......... .......... .......... .......... .......... .......... 346 GTGCTAATGG AAAACCCAAG CAGTTGAATT TATCTCTTTC ACTAAATTCT ACATGGTATC 27662 .......... .......... .......... .......... .......... .......... 346 AGAGCCTCGA CCGGGAATCT AACCCTAGCC GAGAGCCGAC CATTTCCGCT ACCGACGTAC 27602 .......... .......... .......... .......... .......... .......... 346 GATCTCCTGA TCGTCGCCGC CGTCTTGCAC GCCGAAGCCT CCGAACGGCC GATCGCCACA 27542 .......... .......... .......... .......... .......... .......... 346 GCCCCCACGA GACGTCATGA CTGCCGAGTC CACTCAATCC AGCACTGTTT CCATCACTGT 27482 .......... .......... .......... .......... .......... .......... 346 TTCCACGGTG ATTGCTGCGA CTGTCCGACC GATCCATGAT CCGAGCTCCG TCTATTATCT 27422 .......... .......... .......... .......... .......... .......... 346 ACACCCGTCA GAAGGTCCGA GTAATTCTCT CACTAAATAC CTACTGAAGG GAGATAATTT 27362 .......... .......... .......... .......... .......... .......... 346 TGACGTTTGG GAGCAAGCGA TTTGTAATGC GCTTGAAGGT AGAAGCAAGA TTGGTTTTCT 27302 .......... .......... .......... .......... .......... .......... 346 ATATGAAAAG GGTTTTCCAA AGCCGACGAA CGTTTTGGAA CTTGATGCCT GGAAAGCGAA 27242 .......... .......... .......... .......... .......... .......... 346 CAATTCCATC ATTTGTTCGT GGATTTTTAA CAGCGCCGAC GAGACGATCC AGCCGAGTCT 27182 .......... .......... .......... .......... .......... .......... 346 CGTCGCTCAA AAAATTGCCC ACGAATTGTG GACCGATATG AAGGCACGAT ATGGAGGCAC 27122 .......... .......... .......... .......... .......... .......... 346 GAATGCTCCT AAATCGTGGC AGTTAAAGTC TGACCTACAA ATGTTGAGGC AAAAAGGTCA 27062 .......... .......... .......... .......... .......... .......... 346 GTCTGTAGTC TCGTACTACA ATCAGTTCAT CATTGTCTGG AACCAATTGT ATGGTTCGAT 27002 .......... .......... .......... .......... .......... .......... 346 TGATCCAACT TGCGGGTGTA TATGTCCTGC GGCTGCAAAA ATGCGTCTTC GATTTGAGGA 26942 .......... .......... .......... .......... .......... .......... 346 GGAGAAGACG CAGGCGTTTC TCCTCGGGCT TGATGATGCT CAGTTCGGGG CGACTCGCTC 26882 .......... .......... .......... .......... .......... .......... 346 TCAGATCTTC GGCACCCGCC CACTTCCTGT TCTCAACGAA GCCTACTATC TTGTCTCTTA 26822 .......... .......... .......... .......... .......... .......... 346 GGAGGAGAGA TACAAGTCGA TTGTGCGTAA CTGTGATGAC CGAACCGATG GGTTGACATT 26762 .......... .......... .......... .......... .......... .......... 346 CGCGGTTGAA ACTCAACCCA CACCACCCCC GAAATACAAG TGCACCCATT GCGGGAAAAC 26702 .......... .......... .......... .......... .......... .......... 346 TGGTCACTCT GCCGAACGGT GTTTTCTTTT GGTCGGTTTT CCCAATGGAG GAAGAGGGGG 26642 .......... .......... .......... .......... .......... .......... 346 TTGTGTGGGC GGACGCGGGG GTCGAGGAGG TCGTGGCCCA CCTGGCCGTG AGCAGTCCAC 26582 .......... .......... .......... .......... .......... .......... 346 AAGTCGCGAT AGCGGCACGG CTGCACACAC CGACGGTCCA ACGCCCGTAC CAGCATCGAC 26522 .......... .......... .......... .......... .......... .......... 346 GTCCGGCAGC AGCCAAAGCG GGGTCCTTTT CGGGCTGTCG GCCGAGCAGA TGACCCGACT 26462 .......... .......... .......... .......... .......... .......... 346 ATTGATTATG CTCGACACTC CTGCACAATC AGGCAATAAC ACGGGTAAGG TTCATGCTTT 26402 .......... .......... .......... .......... .......... .......... 346 GTCACCCGAT TGGTTAATTG ATAGTGGTGC TTCACACCAC ATGACGGGTA ATTTTCCATC 26342 .......... .......... .......... .......... .......... .......... 346 TCTTTATGAT ATTATGTCTG TCCCTGAGTG TTCTATTGGC CTCCCGGATG GCACTCGTGT 26282 .......... .......... .......... .......... .......... .......... 346 TATGGCCAAT TACTGTGGTA GTGTACAGAT TTCTGCCAAT TTATTTTTGA GAAATGTGCT 26222 .......... .......... .......... .......... .......... .......... 346 GTTCGTCCCT ACCTTGAAAT GCAACTTGAT CTCTATTGGA TGCCTGATTG AGTTTAACAA 26162 .......... .......... .......... .......... .......... .......... 346 TTATCGTGTG ATTTTTGATG ATTGTTGTTG TGTGTTACAG GACCGTGTTT TGAC 26108 | || | || |||| .......... .......... .......... .......... GCCCAAGGTT TGAC 360 hqPGS_C08HBa0294K15.1-_SGN-E578389+ (29221 29162,29009 28934,28884 28792) ******************************************************************************** EST sequence 92 +strand 680 n (File: SGN-E379427+) 1 ACTTCAAATA TTGTTCAGAA AAAGGGCAAC GAATTATACA ATTGTGAATT ATATAATTGC 61 AGTGAAATAC AATTTTCTCT AACTTTATAC AACAGAAGTG TATATATTGT GTTTTTGTTT 121 TTGTATAAAG CGAGACAAAA ACATATATAT TCTTGCCATA CACTTATAAT TATGCAATAT 181 ACATACATTT TAATTCGATT CAACGGTATG CAAAGCAAAT TTATAAAAAT ATTGCAGCGA 241 AATAAGCAGC GATTTATACG ATTGTGCATT ACACAATCGC AGTGAATGAA GATAGCGAAT 301 TATACAATTG CAGCGAAATA GGCCATCAAA TTATACAATT TAGGCCAGCG AATTATACAA 361 TTGTATATGT ATAGCGAATT ATACAGTTTT ATGTTTGCTA TGGAGCGCAA TTATGCAAAC 421 TTTGTTATAA CATACAAATA TGAATTTTTT ATTTGCTATA CGTGAAAGTT GCCCTTAATT 481 AAATGCTCCA CAGTCTATAC GAATATTTCC ATTCTTACCC GTCTTCACAC CAACTCGGCC 541 CAATTTAGTC ATCGCATTAA CAAATGCGGT TTCAAAAACT TTAGAATTAC TGGCCCACAA 601 ATTAACAGTA CCTTTAGACC TTTGGTCTGT GAACAAAACT TGATCTGATG TGAATAGGCC 661 CATTCCGTTT TGCAAGTTTT Predicted gene structure (within gDNA segment 30095 to 25037): Exon 1 29216 28956 ( 261 n); cDNA 1 266 ( 266 n); score: 0.851 Intron 1 28955 28180 ( 776 n); Pd: 0.000 (s: 0.59), Pa: 0.999 (s: 0.58) Exon 2 28179 28135 ( 45 n); cDNA 267 307 ( 41 n); score: 0.578 MATCH C08HBa0294K15.1- SGN-E379427+ 0.851 306 0.450 C PGS_C08HBa0294K15.1-_SGN-E379427+ (29216 28956,28179 28135) Alignment (genomic DNA sequence = upper lines): ACTTCAAATA TTGCAGAGAA AAAGGCCAAA AAATTATACA ATTGTGAATT ATACAATTGC 29157 |||||||||| ||| |||| ||||| ||| ||||||||| |||||||||| ||| |||||| ACTTCAAATA TTGTTCAGAA AAAGGGCAAC GAATTATACA ATTGTGAATT ATATAATTGC 60 AGTGAAATAC AATTTTTTCT AGTTTTATAC AACAGAAGTG TATATATTGT GTTTCTGTTT 29097 |||||||||| |||||| ||| | ||||||| |||||||||| |||||||||| |||| ||||| AGTGAAATAC AATTTTCTCT AACTTTATAC AACAGAAGTG TATATATTGT GTTTTTGTTT 120 TTGTATAAAG C--GACAAAA ACATATATCT TCTTGCTATA CACTTATAAT TATGCAATAT 29039 |||||||||| | ||||||| |||||||| | |||||| ||| |||||||||| |||||||||| TTGTATAAAG CGAGACAAAA ACATATATAT TCTTGCCATA CACTTATAAT TATGCAATAT 180 ACATACATTT TAATTCGATT CAACTGTATG CAAAGCTAA- TTAT--ACA- ATTGCGGCGA 28983 |||||||||| |||||||||| |||| ||||| |||||| || |||| | | ||||| |||| ACATACATTT TAATTCGATT CAACGGTATG CAAAGCAAAT TTATAAAAAT ATTGCAGCGA 240 AATAGGCCAG CGAATTATAC AATTTAAGCC AGCGAATTAT ACAATTTAGG CCAGCGAATT 28923 |||| | ||| ||| |||||| ||| AATAAG-CAG CGATTTATAC GATTGTG... .......... .......... .......... 266 ATACACTTTT ATATGTATAG CGAATTATAC AGTTTTTATG TTTGCTATGG AGCGCAATTA 28863 .......... .......... .......... .......... .......... .......... 266 TGCAAAGTTT GCTATATTAT ACAAATATGA TTTTTTTGTT TGCTATATGT GAAAGTTGCC 28803 .......... .......... .......... .......... .......... .......... 266 TAAAAAAACG AGGAAAAAAA TTGGAAAAAA AAACGAGGAA AATATTTGAA AAAAGAGGCT 28743 .......... .......... .......... .......... .......... .......... 266 TAAAAGCTAT TGCTAGCGAG ATTTGAACTC ACAAACAACT TAAATGCTTG ACTTTTTCAA 28683 .......... .......... .......... .......... .......... .......... 266 GGCTCCTTAA ATCACTAGGC TACAACACCT TGTTATGTTA AAGGTGTCCA AATTATATTA 28623 .......... .......... .......... .......... .......... .......... 266 TTTAACACTT TGTATATTAT TTTACTTGCA TATACGGTGT AATTTGTTGA CGAAGGGTGT 28563 .......... .......... .......... .......... .......... .......... 266 CCAACAGTAT ATAGCTATGC CCCTAGTCTT GCTTAGAGTG ATTGGTGTAT TGTTATTGCA 28503 .......... .......... .......... .......... .......... .......... 266 TTAGTTATAT TACCATAATT CTTATATTTG AGATTCATTA TTATTTATCA TTGTTTTCAA 28443 .......... .......... .......... .......... .......... .......... 266 TAATTTATCC TAATATATGT TGTTTATTAT GTACCGTTAA TTATATTATT TTCTTGTTCT 28383 .......... .......... .......... .......... .......... .......... 266 TTTGGTAGAC TTTGCATTAT TTTCTTTTTT ATTTTAGAAA ATTAATTTTA CATTTACTAA 28323 .......... .......... .......... .......... .......... .......... 266 AATTGAGCCA AAAATCTTTT GAAAGAAACT CTCTATCTTC GGTAAGTAAT AATATAATAA 28263 .......... .......... .......... .......... .......... .......... 266 TATAATTTGA ATATATTTAC TCTTCTTTGA GCTTTACTTA TAAAATTAAC GGAATATGTT 28203 .......... .......... .......... .......... .......... .......... 266 ATTATTATTA TCATTACGAA CAGGAGGAAA CAAACAGCAG GCGGGTGGAC TAAAGTCACA 28143 | | | ||| | ||| | | | || | || | | .......... .......... ...CATTACA CAATC-GCA- GTGAAT-GAA GATAG-CGAA 299 TAAGACAA 28135 | | |||| TTATACAA 307 hqPGS_C08HBa0294K15.1-_SGN-E379427+ (29216 28956) ******************************************************************************** EST sequence 54 -strand 612 n (File: SGN-E394609-) 1 ATTATTACAC CCCTAATGAA ATGATTAAGG AACTTATTAA AGCAAAACAA CTAAATTCTT 61 ATTTTGCAAT CTTTTCTTGT CATTCACAAG CGATAATTCT AAATCTTTTT CCTTCTCTCC 121 ATTTTATACA AGCTCTTGGG AAAATTGTAT ATAATAGCAA ACTAGTAATC TAACTAAATG 181 GAGTAGCTAG AGTTTGATTT AATTGTGCTC CATAGCAAAC GTTAGCTAAA GTTTGTCAGG 241 CGTCTCCCTC CCAAAAATCT CGCTCGCCAC TCTCCATTCT CGCTCGCCTA TCTCGCTATA 301 TACACAGAAG TGTATAAATT CTGTTTCTAT TTTGTATAAA GCGAGAGAAA ATTGTATATA 361 CACATGTAAA AATATATATC TTCGTGTTAT ACACTTAATT ATACAAATTA CAAACATTTT 421 ACTTCAAATA TTGCAGAGAA AAAGGCCAAC GAATTATACA ATTGTGAATT ATATAATTGC 481 AGTGAAATAC AATTTTCTCT AACTTTATAC AACAGAAGTG TATATATTGT GTTTTTGTTT 541 TTGTATAAAG CGAGACAAAA ACATATATAT TCTTGCCATA CACTTATAAT TATGCAATAT 601 ACATACATTT TA Predicted gene structure (within gDNA segment 33207 to 28427): Exon 1 29496 29027 ( 470 n); cDNA 139 612 ( 474 n); score: 0.888 MATCH C08HBa0294K15.1- SGN-E394609- 0.888 470 0.768 C PGS_C08HBa0294K15.1-_SGN-E394609- (29496 29027) Alignment (genomic DNA sequence = upper lines): GGAAAATTGT ATAAAATAGC AAATTAATAA CCTAAATTAA ATTGAATAGC TAGGGTTTGA 29437 |||||||||| ||| |||||| ||| || ||| |||| ||| || || |||| ||| |||||| GGAAAATTGT ATATAATAGC AAACTAGTAA TCTAA-CTAA ATGGAGTAGC TAGAGTTTGA 197 TTTAATTGTG CTCCATAGCA AACATTGACA AAAAATTGCC AGGCGTCTCT CTCCCAGAAG 29377 |||||||||| |||||||||| ||| || | ||| ||| | ||||||||| |||||| || TTTAATTGTG CTCCATAGCA AACGTTAGCT AAAGTTTGTC AGGCGTCTCC CTCCCAAAAA 257 TCTCGCTCGC CACTCTCCCA T-T--CTCGC CTCTCTCGCT TTATACACAA AAGTGTATAA 29320 |||||||||| |||||||| | | ||||| || ||||||| |||||||| |||||||||| TCTCGCTCGC CACTCTCCAT TCTCGCTCGC CTATCTCGCT ATATACACAG AAGTGTATAA 317 TTTCTGTTTC TGTTTTGTAT AAAGCGAGAG AAAATTGTAT TTACACATGC AAAAATGTAT 29260 ||||||||| | |||||||| |||||||||| |||||||||| |||||||| |||||| ||| ATTCTGTTTC TATTTTGTAT AAAGCGAGAG AAAATTGTAT ATACACATGT AAAAATATAT 377 ATCTTCGTGT TATACACTTA ATTATATAAT TTACAAACAT TTTACTTCAA ATATTGCAGA 29200 |||||||||| |||||||||| |||||| || |||||||||| |||||||||| |||||||||| ATCTTCGTGT TATACACTTA ATTATACAAA TTACAAACAT TTTACTTCAA ATATTGCAGA 437 GAAAAAGGCC AAAAAATTAT ACAATTGTGA ATTATACAAT TGCAGTGAAA TACAATTTTT 29140 |||||||||| || |||||| |||||||||| |||||| ||| |||||||||| ||||||||| GAAAAAGGCC AACGAATTAT ACAATTGTGA ATTATATAAT TGCAGTGAAA TACAATTTTC 497 TCTAGTTTTA TACAACAGAA GTGTATATAT TGTGTTTCTG TTTTTGTATA AAGC--GACA 29082 |||| |||| |||||||||| |||||||||| ||||||| || |||||||||| |||| |||| TCTAACTTTA TACAACAGAA GTGTATATAT TGTGTTTTTG TTTTTGTATA AAGCGAGACA 557 AAAACATATA TCTTCTTGCT ATACACTTAT AATTATGCAA TATACATACA TTTTA 29027 |||||||||| | ||||||| |||||||||| |||||||||| |||||||||| ||||| AAAACATATA TATTCTTGCC ATACACTTAT AATTATGCAA TATACATACA TTTTA 612 hqPGS_C08HBa0294K15.1-_SGN-E394609- (29496 29027) ******************************************************************************** EST sequence 88 +strand 750 n (File: SGN-E379112+) 1 TGTGGGAATA TATATATATA TATATTCCGT TAATTAGACG AAATTGAGAA GCTGAAATCT 61 CACCTATAAC ATCAAGTATA CACGTTACCT ATGCCCTGGT TGTTTATAGC TGAATTTCAA 121 GCCCCTTTTC TTATTCTATT ATTACACCCC TAATGAAATG ATTAAGGAAC TTATTAAAGC 181 AAAACAACTA AATTCTTATT TTGCAATCTT TTCTTGTCAT TCACAAGCGA TAATTCTAAA 241 TCTTTTTCCT TCTCTCCATT TTATACAAGC TCTTGGGAAA ATTGTATATA ATAGCAAACT 301 AGTAATCTAA CTAAATGGAG TAGCTAGAGT TTGATTTAAT TGTGCTCCAT AGCAAACGTT 361 AGCTAAAGTT TGTCAGGCGT CTCCCTCCCA AAAATCTCGC TCGCCACTCT CCATTCTCGC 421 TCGCCTATCT CGCTATATAC ACAGAAGTGT ATAAATTCTG TTTCTATTTT GTATAAAGCG 481 AGAGAAAATT GTATATACAC ATGTAAAAAT ATATATCTTC GTGTTATACA CTTAATTATA 541 CAAATTACAA ACATTTTACT TCAAATATTG CAGAGAAAAA GGCCAACGAA TTATACAATT 601 GTGAATTATA TAATTGCAGT GAAATACAAT TTTCTCTAAC TTTATACAAC AGAAGTGTAT 661 ATATTGTGNT TTTTGTTTTT GTATAAAGCG AGACAAAAAC ATATATATTC TTGCCATACA 721 CTTATAATTA TGCAATATAC ATACATTTTA Predicted gene structure (within gDNA segment 34585 to 28417): Exon 1 29496 29027 ( 470 n); cDNA 276 750 ( 475 n); score: 0.883 MATCH C08HBa0294K15.1- SGN-E379112+ 0.883 470 0.627 C PGS_C08HBa0294K15.1-_SGN-E379112+ (29496 29027) Alignment (genomic DNA sequence = upper lines): GGAAAATTGT ATAAAATAGC AAATTAATAA CCTAAATTAA ATTGAATAGC TAGGGTTTGA 29437 |||||||||| ||| |||||| ||| || ||| |||| ||| || || |||| ||| |||||| GGAAAATTGT ATATAATAGC AAACTAGTAA TCTAA-CTAA ATGGAGTAGC TAGAGTTTGA 334 TTTAATTGTG CTCCATAGCA AACATTGACA AAAAATTGCC AGGCGTCTCT CTCCCAGAAG 29377 |||||||||| |||||||||| ||| || | ||| ||| | ||||||||| |||||| || TTTAATTGTG CTCCATAGCA AACGTTAGCT AAAGTTTGTC AGGCGTCTCC CTCCCAAAAA 394 TCTCGCTCGC CACTCTCCCA T-T--CTCGC CTCTCTCGCT TTATACACAA AAGTGTATAA 29320 |||||||||| |||||||| | | ||||| || ||||||| |||||||| |||||||||| TCTCGCTCGC CACTCTCCAT TCTCGCTCGC CTATCTCGCT ATATACACAG AAGTGTATAA 454 TTTCTGTTTC TGTTTTGTAT AAAGCGAGAG AAAATTGTAT TTACACATGC AAAAATGTAT 29260 ||||||||| | |||||||| |||||||||| |||||||||| |||||||| |||||| ||| ATTCTGTTTC TATTTTGTAT AAAGCGAGAG AAAATTGTAT ATACACATGT AAAAATATAT 514 ATCTTCGTGT TATACACTTA ATTATATAAT TTACAAACAT TTTACTTCAA ATATTGCAGA 29200 |||||||||| |||||||||| |||||| || |||||||||| |||||||||| |||||||||| ATCTTCGTGT TATACACTTA ATTATACAAA TTACAAACAT TTTACTTCAA ATATTGCAGA 574 GAAAAAGGCC AAAAAATTAT ACAATTGTGA ATTATACAAT TGCAGTGAAA TACAATTTTT 29140 |||||||||| || |||||| |||||||||| |||||| ||| |||||||||| ||||||||| GAAAAAGGCC AACGAATTAT ACAATTGTGA ATTATATAAT TGCAGTGAAA TACAATTTTC 634 TCTAGTTTTA TACAACAGAA GTGTATATAT TGTG-TTTCT GTTTTTGTAT AAAGC--GAC 29083 |||| |||| |||||||||| |||||||||| |||| ||| | |||||||||| ||||| ||| TCTAACTTTA TACAACAGAA GTGTATATAT TGTGNTTTTT GTTTTTGTAT AAAGCGAGAC 694 AAAAACATAT ATCTTCTTGC TATACACTTA TAATTATGCA ATATACATAC ATTTTA 29027 |||||||||| || ||||||| ||||||||| |||||||||| |||||||||| |||||| AAAAACATAT ATATTCTTGC CATACACTTA TAATTATGCA ATATACATAC ATTTTA 750 hqPGS_C08HBa0294K15.1-_SGN-E379112+ (29496 29027) ******************************************************************************** EST sequence 41 -strand 530 n (File: SGN-E393065-) 1 TTCACAAGCG ATAATTCTAA ATCTTTTTCC TTCTCTCCAT TTTATACAAG CTATGGGACA 61 AATTGTATAT AATAGCAAAC TAGTAATCTA ACTAAATGGA GTAGATAGAG TTAGATCTTA 121 TTGTGCTTCA TGGCAAACGT TAGCTAAAGT TGGTCAGGCG TCTGCCTCCC AAAAATCTCG 181 CTGGCCATTT TCCATTATCG CTGGCATATC TCGTTATATA CACAGAAGTG TATAGATTAT 241 GTTTATATTT TGTATAAAGC GAGAGAAAAT TGTATATACA CATGTGAAAA TATATATCTT 301 CGTGTTATAC ACTTAATTAT ACAAATTACA AACATTTTAC TTCAAATATG GCAGTGAAAA 361 AGGCCAAGGA ATTATGCAAT TGTGAATTAT ATAATTGCAG TGAAATACAA TTTTGTCTAA 421 CTTTATACAA CAGAAGTGTA TATATTGTGT TTTTGTTTTA GTATAAAGCG AGACAAAAAC 481 ATATATATTC TTGCCATGCG CTTATAATTA TGCAATATAC ATACATTTTA Predicted gene structure (within gDNA segment 32387 to 28427): Exon 1 29493 29027 ( 467 n); cDNA 60 530 ( 471 n); score: 0.836 MATCH C08HBa0294K15.1- SGN-E393065- 0.836 467 0.881 C PGS_C08HBa0294K15.1-_SGN-E393065- (29493 29027) Alignment (genomic DNA sequence = upper lines): AAATTGTATA AAATAGCAAA TTAATAACCT AAATTAAATT GAATAGCTAG GGTTTGATTT 29434 |||||||||| ||||||||| || ||| || || ||||| || ||| ||| ||| ||| | AAATTGTATA TAATAGCAAA CTAGTAATCT -AACTAAATG GAGTAGATAG AGTTAGATCT 118 AATTGTGCTC CATAGCAAAC ATTGACAAAA AATTGCCAGG CGTCTCTCTC CCAGAAGTCT 29374 |||||||| ||| |||||| || | ||| | | |||| ||||| ||| ||| || ||| TATTGTGCTT CATGGCAAAC GTTAGCTAAA GTTGGTCAGG CGTCTGCCTC CCAAAAATCT 178 CGCTCGCCAC TCTCC--CAT -TCTCGCCTC TCTCGCTTTA TACACAAAAG TGTATAATTT 29317 |||| |||| | ||| || || || | ||||| | || |||||| ||| |||||| || CGCTGGCCAT TTTCCATTAT CGCTGGCATA TCTCGTTATA TACACAGAAG TGTATAGATT 238 CTGTTTCTGT TTTGTATAAA GCGAGAGAAA ATTGTATTTA CACATGCAAA AATGTATATC 29257 ||||| | | |||||||||| |||||||||| ||||||| || |||||| || ||| |||||| ATGTTTATAT TTTGTATAAA GCGAGAGAAA ATTGTATATA CACATGTGAA AATATATATC 298 TTCGTGTTAT ACACTTAATT ATATAATTTA CAAACATTTT ACTTCAAATA TTGCAGAGAA 29197 |||||||||| |||||||||| ||| || ||| |||||||||| |||||||||| | |||| ||| TTCGTGTTAT ACACTTAATT ATACAAATTA CAAACATTTT ACTTCAAATA TGGCAGTGAA 358 AAAGGCCAAA AAATTATACA ATTGTGAATT ATACAATTGC AGTGAAATAC AATTTTTTCT 29137 ||||||||| |||||| || |||||||||| ||| |||||| |||||||||| |||||| ||| AAAGGCCAAG GAATTATGCA ATTGTGAATT ATATAATTGC AGTGAAATAC AATTTTGTCT 418 AGTTTTATAC AACAGAAGTG TATATATTGT GTTTCTGTTT TTGTATAAAG C--GACAAAA 29079 | ||||||| |||||||||| |||||||||| |||| ||||| | |||||||| | ||||||| AACTTTATAC AACAGAAGTG TATATATTGT GTTTTTGTTT TAGTATAAAG CGAGACAAAA 478 ACATATATCT TCTTGCTATA CACTTATAAT TATGCAATAT ACATACATTT TA 29027 |||||||| | |||||| || | |||||||| |||||||||| |||||||||| || ACATATATAT TCTTGCCATG CGCTTATAAT TATGCAATAT ACATACATTT TA 530 hqPGS_C08HBa0294K15.1-_SGN-E393065- (29493 29027) ******************************************************************************** EST sequence 43 -strand 325 n (File: SGN-E393076-) 1 CTATCTCGCT ATATACACAA AAAAAAATAA ATTCTGTTTT TATTTTGTAT AAAGCGAGAG 61 AAAATTGTAT ATACACATGT AAAAATATAT ATCTTCGTGT TATACACTTA ATTATACAAA 121 TTACAAACAT TTTACTTCAA ATATTGCAGA GAAAAAGGCC AACGAATTAT ACAATTGTGA 181 ATTATATAAT TGCAGTGAAA TACAATTTTC TCTAACTTTA TACAACAGAA GTGTATATAT 241 TGTGTTTTTG TTTTTGTATA AAGCGAGACA AAAACATATA TATTCTTGCC ATACACTTAT 301 AATTATGCAA TATACATACA TTTTA Predicted gene structure (within gDNA segment 30337 to 28427): Exon 1 29349 29027 ( 323 n); cDNA 1 325 ( 325 n); score: 0.913 MATCH C08HBa0294K15.1- SGN-E393076- 0.913 323 0.994 C PGS_C08HBa0294K15.1-_SGN-E393076- (29349 29027) Alignment (genomic DNA sequence = upper lines): CTCTCTCGCT TTATACACAA AAGTGTATAA TTTCTGTTTC TGTTTTGTAT AAAGCGAGAG 29290 || ||||||| ||||||||| || |||| |||||||| | |||||||| |||||||||| CTATCTCGCT ATATACACAA AAAAAAATAA ATTCTGTTTT TATTTTGTAT AAAGCGAGAG 60 AAAATTGTAT TTACACATGC AAAAATGTAT ATCTTCGTGT TATACACTTA ATTATATAAT 29230 |||||||||| |||||||| |||||| ||| |||||||||| |||||||||| |||||| || AAAATTGTAT ATACACATGT AAAAATATAT ATCTTCGTGT TATACACTTA ATTATACAAA 120 TTACAAACAT TTTACTTCAA ATATTGCAGA GAAAAAGGCC AAAAAATTAT ACAATTGTGA 29170 |||||||||| |||||||||| |||||||||| |||||||||| || |||||| |||||||||| TTACAAACAT TTTACTTCAA ATATTGCAGA GAAAAAGGCC AACGAATTAT ACAATTGTGA 180 ATTATACAAT TGCAGTGAAA TACAATTTTT TCTAGTTTTA TACAACAGAA GTGTATATAT 29110 |||||| ||| |||||||||| ||||||||| |||| |||| |||||||||| |||||||||| ATTATATAAT TGCAGTGAAA TACAATTTTC TCTAACTTTA TACAACAGAA GTGTATATAT 240 TGTGTTTCTG TTTTTGTATA AAGC--GACA AAAACATATA TCTTCTTGCT ATACACTTAT 29052 ||||||| || |||||||||| |||| |||| |||||||||| | ||||||| |||||||||| TGTGTTTTTG TTTTTGTATA AAGCGAGACA AAAACATATA TATTCTTGCC ATACACTTAT 300 AATTATGCAA TATACATACA TTTTA 29027 |||||||||| |||||||||| ||||| AATTATGCAA TATACATACA TTTTA 325 hqPGS_C08HBa0294K15.1-_SGN-E393076- (29349 29027) ******************************************************************************** EST sequence 42 -strand 308 n (File: SGN-E393075-) 1 AAAAAAAAAA AAACCTCTGT TTCTATTTTG TATAAAGCGA GAGAAAATTG TATATACACA 61 TGTAAAAATA TATATCTTCG TGTTATACAC TTAATTATAC AAATTACAAA CATTTTACTT 121 CAAATATTGC AGAGAAAAAG GCCAACGAAT TATACAATTG TGAATTATAT AATTGCAGTG 181 AAATACAATT TTCTCTAACT TTATACAACA GAAGTGTATA TATTGTGTTT TTGTTTTTGT 241 ATAAAGCGAG ACAAAAACAT ATATATTCTT GCCATACACT TATAATTATG CAATATACAT 301 ACATTTTA Predicted gene structure (within gDNA segment 30167 to 28427): Exon 1 29331 29027 ( 305 n); cDNA 2 308 ( 307 n); score: 0.911 MATCH C08HBa0294K15.1- SGN-E393075- 0.911 305 0.990 C PGS_C08HBa0294K15.1-_SGN-E393075- (29331 29027) Alignment (genomic DNA sequence = upper lines): AAAAGTGTAT AATTTCTGTT TCTGTTTTGT ATAAAGCGAG AGAAAATTGT ATTTACACAT 29272 |||| | || |||||| ||| |||||| |||||||||| |||||||||| || ||||||| AAAAAAAAAA AACCTCTGTT TCTATTTTGT ATAAAGCGAG AGAAAATTGT ATATACACAT 61 GCAAAAATGT ATATCTTCGT GTTATACACT TAATTATATA ATTTACAAAC ATTTTACTTC 29212 | |||||| | |||||||||| |||||||||| |||||||| | | |||||||| |||||||||| GTAAAAATAT ATATCTTCGT GTTATACACT TAATTATACA AATTACAAAC ATTTTACTTC 121 AAATATTGCA GAGAAAAAGG CCAAAAAATT ATACAATTGT GAATTATACA ATTGCAGTGA 29152 |||||||||| |||||||||| |||| |||| |||||||||| |||||||| | |||||||||| AAATATTGCA GAGAAAAAGG CCAACGAATT ATACAATTGT GAATTATATA ATTGCAGTGA 181 AATACAATTT TTTCTAGTTT TATACAACAG AAGTGTATAT ATTGTGTTTC TGTTTTTGTA 29092 |||||||||| | |||| || |||||||||| |||||||||| ||||||||| |||||||||| AATACAATTT TCTCTAACTT TATACAACAG AAGTGTATAT ATTGTGTTTT TGTTTTTGTA 241 TAAAGC--GA CAAAAACATA TATCTTCTTG CTATACACTT ATAATTATGC AATATACATA 29034 |||||| || |||||||||| ||| |||||| | |||||||| |||||||||| |||||||||| TAAAGCGAGA CAAAAACATA TATATTCTTG CCATACACTT ATAATTATGC AATATACATA 301 CATTTTA 29027 ||||||| CATTTTA 308 hqPGS_C08HBa0294K15.1-_SGN-E393075- (29331 29027) ******************************************************************************** EST sequence 44 -strand 153 n (File: SGN-E392727-) 1 AATTGTGAAT TATATAATTG CAGTGAAATA CAATTTTCTC TAACTTTATA CAACAGAAGT 61 GTATATATTG TGTTTTAAAT TTTGTATAAA GCGTGACAAA AACATATATA TTCTTGCCAT 121 ACACTTATAA TTATGCAATA TACATACATA TTA Predicted gene structure (within gDNA segment 29922 to 28391): Exon 1 29177 29027 ( 151 n); cDNA 1 153 ( 153 n); score: 0.894 MATCH C08HBa0294K15.1- SGN-E392727- 0.894 151 0.987 C PGS_C08HBa0294K15.1-_SGN-E392727- (29177 29027) Alignment (genomic DNA sequence = upper lines): AATTGTGAAT TATACAATTG CAGTGAAATA CAATTTTTTC TAGTTTTATA CAACAGAAGT 29118 |||||||||| |||| ||||| |||||||||| ||||||| || || |||||| |||||||||| AATTGTGAAT TATATAATTG CAGTGAAATA CAATTTTCTC TAACTTTATA CAACAGAAGT 60 GTATATATTG TGTTTCTGTT TTTGTATAAA GCG--ACAAA AACATATATC TTCTTGCTAT 29060 |||||||||| ||||| | |||||||||| ||| ||||| ||||||||| ||||||| || GTATATATTG TGTTTTAAAT TTTGTATAAA GCGTGACAAA AACATATATA TTCTTGCCAT 120 ACACTTATAA TTATGCAATA TACATACATT TTA 29027 |||||||||| |||||||||| ||||||||| ||| ACACTTATAA TTATGCAATA TACATACATA TTA 153 hqPGS_C08HBa0294K15.1-_SGN-E392727- (29177 29027) ******************************************************************************** EST sequence 8 -strand 570 n (File: SGN-E379618-) 1 GCAAAACAAC TAAATTCTTA TTTTGCAATC TTTTCTTGTC ATTCACAAGC GATAATTCTA 61 AATCTTTTTC CTTCTCTCCA TNTTATACAA GCTCTTGGGA AAATTGTATA TAATAGCAAA 121 CTAGTAATCT AACTAAATGG AGTAGCTAGA GTTTGATTTA ATTGTGCTCC ATAGCAAACG 181 TTAGCTAAAG TTTGTCAGGC GTCTCCCTCC CAAAAATCTC GCTCGCCACT CTCCATTCTC 241 GCTCGCCTAT CTCGCTATAT ACACAGAAGT GTATAAATTC TGTTTCTATT TTGTATAAAG 301 CGAGAGAAAA TTGTATATAC ACATGTAAAA ATATATATCT TCGTGTTATA CACTTAATTA 361 TACAAATTAC AAACATTTTA CTTCAAATAT TGCAGAGAAA AAGGCCAACG AATTATACAA 421 TTGTGAATTA TATAATTGCA GTGAAATACA ATTTTCTCTA ACTTTATACA ACAGAAGTGT 481 ATATATTGTG TTTTTGTTTT TGTATAAAGC GAGACAAAAA CATATATATT CTTGCCATAC 541 ACTTATAATT ATGCAATATA CATACATTTT Predicted gene structure (within gDNA segment 32797 to 28428): Exon 1 29496 29028 ( 469 n); cDNA 98 570 ( 473 n); score: 0.888 MATCH C08HBa0294K15.1- SGN-E379618- 0.888 469 0.823 C PGS_C08HBa0294K15.1-_SGN-E379618- (29496 29028) Alignment (genomic DNA sequence = upper lines): GGAAAATTGT ATAAAATAGC AAATTAATAA CCTAAATTAA ATTGAATAGC TAGGGTTTGA 29437 |||||||||| ||| |||||| ||| || ||| || || ||| || || |||| ||| |||||| GGAAAATTGT ATATAATAGC AAACTAGTAA TCT-AACTAA ATGGAGTAGC TAGAGTTTGA 156 TTTAATTGTG CTCCATAGCA AACATTGACA AAAAATTGCC AGGCGTCTCT CTCCCAGAAG 29377 |||||||||| |||||||||| ||| || | ||| ||| | ||||||||| |||||| || TTTAATTGTG CTCCATAGCA AACGTTAGCT AAAGTTTGTC AGGCGTCTCC CTCCCAAAAA 216 TCTCGCTCGC CACTCTCCCA T-T--CTCGC CTCTCTCGCT TTATACACAA AAGTGTATAA 29320 |||||||||| |||||||| | | ||||| || ||||||| |||||||| |||||||||| TCTCGCTCGC CACTCTCCAT TCTCGCTCGC CTATCTCGCT ATATACACAG AAGTGTATAA 276 TTTCTGTTTC TGTTTTGTAT AAAGCGAGAG AAAATTGTAT TTACACATGC AAAAATGTAT 29260 ||||||||| | |||||||| |||||||||| |||||||||| |||||||| |||||| ||| ATTCTGTTTC TATTTTGTAT AAAGCGAGAG AAAATTGTAT ATACACATGT AAAAATATAT 336 ATCTTCGTGT TATACACTTA ATTATATAAT TTACAAACAT TTTACTTCAA ATATTGCAGA 29200 |||||||||| |||||||||| |||||| || |||||||||| |||||||||| |||||||||| ATCTTCGTGT TATACACTTA ATTATACAAA TTACAAACAT TTTACTTCAA ATATTGCAGA 396 GAAAAAGGCC AAAAAATTAT ACAATTGTGA ATTATACAAT TGCAGTGAAA TACAATTTTT 29140 |||||||||| || |||||| |||||||||| |||||| ||| |||||||||| ||||||||| GAAAAAGGCC AACGAATTAT ACAATTGTGA ATTATATAAT TGCAGTGAAA TACAATTTTC 456 TCTAGTTTTA TACAACAGAA GTGTATATAT TGTGTTTCTG TTTTTGTATA AAGC--GACA 29082 |||| |||| |||||||||| |||||||||| ||||||| || |||||||||| |||| |||| TCTAACTTTA TACAACAGAA GTGTATATAT TGTGTTTTTG TTTTTGTATA AAGCGAGACA 516 AAAACATATA TCTTCTTGCT ATACACTTAT AATTATGCAA TATACATACA TTTT 29028 |||||||||| | ||||||| |||||||||| |||||||||| |||||||||| |||| AAAACATATA TATTCTTGCC ATACACTTAT AATTATGCAA TATACATACA TTTT 570 hqPGS_C08HBa0294K15.1-_SGN-E379618- (29496 29028) ******************************************************************************** EST sequence 71 -strand 450 n (File: SGN-E200845-) 1 CTAGTAATCT AACTAAATGG AGTAGCTAGA GTTTGATTTA ATTGTGCTCC ATAGCAAACG 61 TTAGCTAAAG TTTGTCAGGC GTCTCCCTCC CAAAAATCTC GCTCGCCACT CTCCATTCTC 121 GCTCGCCTAT CTCGCTATAT ACACAGAAGT GTATAAATTC TGTTTCTATT TTGTATAAAG 181 CGAGAGAAAA TTGTATATAC ACATGTAAAA ATATATATCT TCGTGTTATA CACTTAATTA 241 TACAAATTAC AAACATTTTA CTTCAAATAT TGCAGAGAAA AAGGCCAACG AATTATACAA 301 TTGTGAATTA TATAATTGCA GTGAAATACA ATTTTCTCTA ACTTTATACA ACAGAAGTGT 361 ATATATTGTG TTTTTGTTTT TGTATAAAGC GAGACAAAAA CATATATATT CTTGCCATAC 421 ACTTATAATT ATGCAATATA CATACATTTT Predicted gene structure (within gDNA segment 31597 to 28428): Exon 1 29472 29028 ( 445 n); cDNA 2 450 ( 449 n); score: 0.887 MATCH C08HBa0294K15.1- SGN-E200845- 0.887 445 0.989 C PGS_C08HBa0294K15.1-_SGN-E200845- (29472 29028) Alignment (genomic DNA sequence = upper lines): TAATAACCTA AATTAAATTG AATAGCTAGG GTTTGATTTA ATTGTGCTCC ATAGCAAACA 29413 || ||| || || ||||| | | ||||||| |||||||||| |||||||||| ||||||||| TAGTAATCT- AACTAAATGG AGTAGCTAGA GTTTGATTTA ATTGTGCTCC ATAGCAAACG 60 TTGACAAAAA ATTGCCAGGC GTCTCTCTCC CAGAAGTCTC GCTCGCCACT CTCCCAT-TC 29354 || | ||| ||| ||||| ||||| |||| || || |||| |||||||||| |||| | || TTAGCTAAAG TTTGTCAGGC GTCTCCCTCC CAAAAATCTC GCTCGCCACT CTCCATTCTC 120 --TCGCCTCT CTCGCTTTAT ACACAAAAGT GTATAATTTC TGTTTCTGTT TTGTATAAAG 29296 |||||| | |||||| ||| ||||| |||| |||||| ||| ||||||| || |||||||||| GCTCGCCTAT CTCGCTATAT ACACAGAAGT GTATAAATTC TGTTTCTATT TTGTATAAAG 180 CGAGAGAAAA TTGTATTTAC ACATGCAAAA ATGTATATCT TCGTGTTATA CACTTAATTA 29236 |||||||||| |||||| ||| ||||| |||| || ||||||| |||||||||| |||||||||| CGAGAGAAAA TTGTATATAC ACATGTAAAA ATATATATCT TCGTGTTATA CACTTAATTA 240 TATAATTTAC AAACATTTTA CTTCAAATAT TGCAGAGAAA AAGGCCAAAA AATTATACAA 29176 || || |||| |||||||||| |||||||||| |||||||||| |||||||| |||||||||| TACAAATTAC AAACATTTTA CTTCAAATAT TGCAGAGAAA AAGGCCAACG AATTATACAA 300 TTGTGAATTA TACAATTGCA GTGAAATACA ATTTTTTCTA GTTTTATACA ACAGAAGTGT 29116 |||||||||| || ||||||| |||||||||| ||||| |||| |||||||| |||||||||| TTGTGAATTA TATAATTGCA GTGAAATACA ATTTTCTCTA ACTTTATACA ACAGAAGTGT 360 ATATATTGTG TTTCTGTTTT TGTATAAAGC --GACAAAAA CATATATCTT CTTGCTATAC 29058 |||||||||| ||| |||||| |||||||||| |||||||| ||||||| || ||||| |||| ATATATTGTG TTTTTGTTTT TGTATAAAGC GAGACAAAAA CATATATATT CTTGCCATAC 420 ACTTATAATT ATGCAATATA CATACATTTT 29028 |||||||||| |||||||||| |||||||||| ACTTATAATT ATGCAATATA CATACATTTT 450 hqPGS_C08HBa0294K15.1-_SGN-E200845- (29472 29028) ******************************************************************************** EST sequence 137 +strand 651 n (File: SGN-E394141+) 1 TTTTTTTTTT TTTTTTTTTT CTATCAATGT GATACTGGGG GAATATATAT ATATCTTTTT 61 AATGTTAATT AATCGAAATT GAGAAGCTGA AATTTCACCT ATAACATCAA GTATACACGT 121 TACCTATGCC CTGGTTGTTT ATAGCTGAAT TTCAAGCCCC TTTTCTTATT CTATTATTAC 181 ACCCCTAATG AAATGATTAA GGAACTTATT AAAGCAAAAC AACTAAATTC TTATTTTGCA 241 ATCTTTTCTT GTCATTCACA AGCGATAATT CTAAATCTTT TTCCTTCTCT CCATTTTATA 301 CAAGCTCTTG GGAAAATTGT ATATAATAGC AAACTAGTAA TCTAACTAAA TGGAGTAGCT 361 AGAGTTTGAT TTAATTGTGC TCCATAGCAA ACGTTAGCTA AAGTTTGTCA GGCGTCTCCC 421 TCCCAAAAAT CTCGCTCGCC ACTCTCCATT CTCGCTCGCC TATCTCGCTA TATACACAGA 481 AGTGTATAAA TTCTGTTTCT ATTTTGTATA AAGCGAGAGA AAATTGTATA TACACATGTA 541 AAAATATATA TCTTCGTGTT ATACACTTAA TTATACAAAT TACAAACATT TTACTTCAAA 601 TATTGCAAAG AAAAAGGCCA ACGAATTATA CAATTGTGAA TTATATAATT G Predicted gene structure (within gDNA segment 34917 to 28494): Exon 1 29496 29158 ( 339 n); cDNA 311 651 ( 341 n); score: 0.875 PPA cDNA 20 1 MATCH C08HBa0294K15.1- SGN-E394141+ 0.875 339 0.521 C PGS_C08HBa0294K15.1-_SGN-E394141+ (29496 29158) Alignment (genomic DNA sequence = upper lines): GGAAAATTGT ATAAAATAGC AAATTAATAA CCTAAATTAA ATTGAATAGC TAGGGTTTGA 29437 |||||||||| ||| |||||| ||| || ||| |||| ||| || || |||| ||| |||||| GGAAAATTGT ATATAATAGC AAACTAGTAA TCTAA-CTAA ATGGAGTAGC TAGAGTTTGA 369 TTTAATTGTG CTCCATAGCA AACATTGACA AAAAATTGCC AGGCGTCTCT CTCCCAGAAG 29377 |||||||||| |||||||||| ||| || | ||| ||| | ||||||||| |||||| || TTTAATTGTG CTCCATAGCA AACGTTAGCT AAAGTTTGTC AGGCGTCTCC CTCCCAAAAA 429 TCTCGCTCGC CACTCTCCCA T-T--CTCGC CTCTCTCGCT TTATACACAA AAGTGTATAA 29320 |||||||||| |||||||| | | ||||| || ||||||| |||||||| |||||||||| TCTCGCTCGC CACTCTCCAT TCTCGCTCGC CTATCTCGCT ATATACACAG AAGTGTATAA 489 TTTCTGTTTC TGTTTTGTAT AAAGCGAGAG AAAATTGTAT TTACACATGC AAAAATGTAT 29260 ||||||||| | |||||||| |||||||||| |||||||||| |||||||| |||||| ||| ATTCTGTTTC TATTTTGTAT AAAGCGAGAG AAAATTGTAT ATACACATGT AAAAATATAT 549 ATCTTCGTGT TATACACTTA ATTATATAAT TTACAAACAT TTTACTTCAA ATATTGCAGA 29200 |||||||||| |||||||||| |||||| || |||||||||| |||||||||| |||||||| | ATCTTCGTGT TATACACTTA ATTATACAAA TTACAAACAT TTTACTTCAA ATATTGCAAA 609 GAAAAAGGCC AAAAAATTAT ACAATTGTGA ATTATACAAT TG 29158 |||||||||| || |||||| |||||||||| |||||| ||| || GAAAAAGGCC AACGAATTAT ACAATTGTGA ATTATATAAT TG 651 hqPGS_C08HBa0294K15.1-_SGN-E394141+ (29496 29158) ******************************************************************************** EST sequence 108 +strand 605 n (File: SGN-E392605+) 1 TTTTTTTTTT TTTTTTTTTC CTATCAAATG TGATACTGTG GGAATATATA TATATATCTA 61 TAATGTTAAT TAATCGAAAT TGAGAAGCTG AAATTTCACC TATAACATCA AGTATACACG 121 TTACCTATGC CCTGGTTGTT TATAGCTGAA TTTCAAGCCC CTTTTCTTAT TCTATTATTA 181 CACCCCTAAT GAAATGATTA AGGAACTTAT TAAAGCAAAA CAACTAAATT CTTATTTTGC 241 AATCTTTTCT TGTCATTCAC AAGCGATAAT TCTAAATCTT TTTCCTTCTC TCCATTTTAT 301 ACAAGCTCTT GGGAAAATTG TATATAATAG CAAACTAGTA ATCTAACTAA ATGGAGTAGC 361 TAGAGTTTGA TTTAATTGTG CTCCATAGCA AACGTTAGCT AAAGTTTGTC AGGCGTCTCC 421 CTCCCAAAAA TCTCGCTCGC CACTCTCCAT TCTCGCTCGC CTATCTCGCT ATATACACAG 481 AAGTGTATAA ATTCTGTTTC TATTTTGTAT AAAGCGAGAG AAAATTGTAT ATACACATGT 541 AAAAATATAT ATCTTCGTGT TATACACTTA ATTATACAAA TTACAAACAT TTTACTTCAA 601 ATATT Predicted gene structure (within gDNA segment 34927 to 28334): Exon 1 29496 29205 ( 292 n); cDNA 312 605 ( 294 n); score: 0.868 PPA cDNA 19 1 MATCH C08HBa0294K15.1- SGN-E392605+ 0.868 292 0.483 C PGS_C08HBa0294K15.1-_SGN-E392605+ (29496 29205) Alignment (genomic DNA sequence = upper lines): GGAAAATTGT ATAAAATAGC AAATTAATAA CCTAAATTAA ATTGAATAGC TAGGGTTTGA 29437 |||||||||| ||| |||||| ||| || ||| |||| ||| || || |||| ||| |||||| GGAAAATTGT ATATAATAGC AAACTAGTAA TCTAA-CTAA ATGGAGTAGC TAGAGTTTGA 370 TTTAATTGTG CTCCATAGCA AACATTGACA AAAAATTGCC AGGCGTCTCT CTCCCAGAAG 29377 |||||||||| |||||||||| ||| || | ||| ||| | ||||||||| |||||| || TTTAATTGTG CTCCATAGCA AACGTTAGCT AAAGTTTGTC AGGCGTCTCC CTCCCAAAAA 430 TCTCGCTCGC CACTCTCCCA T-T--CTCGC CTCTCTCGCT TTATACACAA AAGTGTATAA 29320 |||||||||| |||||||| | | ||||| || ||||||| |||||||| |||||||||| TCTCGCTCGC CACTCTCCAT TCTCGCTCGC CTATCTCGCT ATATACACAG AAGTGTATAA 490 TTTCTGTTTC TGTTTTGTAT AAAGCGAGAG AAAATTGTAT TTACACATGC AAAAATGTAT 29260 ||||||||| | |||||||| |||||||||| |||||||||| |||||||| |||||| ||| ATTCTGTTTC TATTTTGTAT AAAGCGAGAG AAAATTGTAT ATACACATGT AAAAATATAT 550 ATCTTCGTGT TATACACTTA ATTATATAAT TTACAAACAT TTTACTTCAA ATATT 29205 |||||||||| |||||||||| |||||| || |||||||||| |||||||||| ||||| ATCTTCGTGT TATACACTTA ATTATACAAA TTACAAACAT TTTACTTCAA ATATT 605 hqPGS_C08HBa0294K15.1-_SGN-E392605+ (29496 29205) ******************************************************************************** EST sequence 62 +strand 383 n (File: SGN-E300332+) 1 ATTATAGTCA ATCTAAAACA TGCCACAGCT GAACAAGTCT GGCCACTCCT TGAAGATTTA 61 CTCAAGCTCA CACACATGGC TACCAAACAT TGACACTCGT CACCAAATTG ATAGTGATAA 121 TAAAGATGAA ATTATCCGCT ACTGCGCTAG CACCACGCCC CTATCGTCAG GCGATGGGGA 181 AGCGATCATC AAGTGGTGTC ACGAGAAGTT GCTGACGATT GATAAGATAG AGCGATGTAT 241 CAGCTATGAG GTCTTAGATA ACAATATCGG GATCAAGTAT TATGTATCTA CGTTGAAAGT 301 GTTGTCATTG GATGAGGGCG GGTGCCAGAT CGAGTGGTTG TTCGTTGCTG ATCCGATTGA 361 TGGGTTGACT TTGGAATTAT TTT Predicted gene structure (within gDNA segment 41633 to 43233): Exon 1 42243 42623 ( 381 n); cDNA 2 383 ( 382 n); score: 0.972 MATCH C08HBa0294K15.1+ SGN-E300332+ 0.972 381 0.995 C PGS_C08HBa0294K15.1+_SGN-E300332+ (42243 42623) Alignment (genomic DNA sequence = upper lines): TTATAGTCAA TCTAAAACAT GCCAAAGCTG AACAAGTATG GCCACTCCTT GAAGATTTCT 42302 |||||||||| |||||||||| |||| ||||| ||||||| || |||||||||| |||||||| TTATAGTCAA TCTAAAACAT GCCACAGCTG AACAAGTCTG GCCACTCCTT GAAGATTTAC 61 TCAA-CTTCC ACAAATGGCT ACCAAACATT GACACTTGTC ACCAAATTGA TAGTGATAAT 42361 |||| || | ||| |||||| |||||||||| |||||| ||| |||||||||| |||||||||| TCAAGCTCAC ACACATGGCT ACCAAACATT GACACTCGTC ACCAAATTGA TAGTGATAAT 121 AAAGATGAAA TTATCCGCTA CTGCGCTAGC ACCACGCCCC TATCGTCAGG CGATGGGGAA 42421 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGATGAAA TTATCCGCTA CTGCGCTAGC ACCACGCCCC TATCGTCAGG CGATGGGGAA 181 GCGATCATCA AGTGGTGTCA CGAGAAGTTG CTGACGATTG ATAAGATAGA GCGATGTATC 42481 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGATCATCA AGTGGTGTCA CGAGAAGTTG CTGACGATTG ATAAGATAGA GCGATGTATC 241 AGCTATGAGG TCTTAGATAA CAATATCGGG ATCAAGTATT ATGTATCTAC GTTGAAAGTG 42541 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCTATGAGG TCTTAGATAA CAATATCGGG ATCAAGTATT ATGTATCTAC GTTGAAAGTG 301 TTGTCATTGG ATGAGGGCGG GTGCCAGATC GAGTGGTTGT TCGTTGCTGA TCCGATTGAT 42601 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTCATTGG ATGAGGGCGG GTGCCAGATC GAGTGGTTGT TCGTTGCTGA TCCGATTGAT 361 GGGTTGACTT TGGAATTATT TT 42623 |||||||||| |||||||||| || GGGTTGACTT TGGAATTATT TT 383 hqPGS_C08HBa0294K15.1+_SGN-E300332+ (42243 42623) ******************************************************************************** EST sequence 129 +strand 660 n (File: SGN-E276694+) 1 GACACAGGGG CTTTCTTGGA AAAGGTCAAG TTTGACAACC CTGGTATACC ATGCTTCCTC 61 TTTGGTCATT CAACGGGAGG AGCGGTGGTC TTAAAGGCAG CTTCTTATCC ACATATTGAA 121 AACATGGTGG AGGGCATCAT ATTGACTTCA CCAGCATTGC GTGTGAAACC TGCAAATCCT 181 ATTGTTAGTG CTGTGGCACC AATTTTTTCA TTGGTTGCAC CTAGGTACCA GTTCAAAGGT 241 TCTCACAAAA GGGGAATCCC TGTTTCAAGG GATCCTGCCG CACTGGTGGC TAAGTATTCT 301 GACCCTCTAG TGTATACTGG GCCTTTGAGG GTGAGGACAG GGCATGAGAT TCTGCGTATC 361 TCGTCTTACT TGATGCGGAA CTTCAAGTCA GTCACTGTCC CATTCTTAGT CCTCCATGGA 421 TCTGCTGATA GAGTGACTGA TCCATTGGCT TCTCAAGATT TGTACAATGA GGCTGCTTCT 481 GAATTCAAAG ACATTAAACT TTATGATGGA TTCTTGCACG ATCTTCTATT TGAGCCTGAG 541 CGTGAAGAAA TTGCCCAGGA TATCATTGAT TGGATGCACA AGAAGTTAGA TTCTGGCAAT 601 CTTGCAAATG TGTATAGTCA GTGCTAGTTT TCTAAATCAT TAGTGTTTTG ATTGATCAAA Predicted gene structure (within gDNA segment 44667 to 42559): Exon 1 44236 44231 ( 6 n); cDNA 1 6 ( 6 n); score: 1.000 Intron 1 44230 44008 ( 223 n); Pd: 0.991 (s: 0), Pa: 0.993 (s: 1.00) Exon 2 44007 43918 ( 90 n); cDNA 7 96 ( 90 n); score: 1.000 Intron 2 43917 43837 ( 81 n); Pd: 0.783 (s: 1.00), Pa: 0.982 (s: 1.00) Exon 3 43836 43744 ( 93 n); cDNA 97 189 ( 93 n); score: 1.000 Intron 3 43743 43640 ( 104 n); Pd: 0.954 (s: 1.00), Pa: 0.998 (s: 1.00) Exon 4 43639 43169 ( 471 n); cDNA 190 660 ( 471 n); score: 1.000 MATCH C08HBa0294K15.1- SGN-E276694+ 1.000 660 1.000 C PGS_C08HBa0294K15.1-_SGN-E276694+ (44236 44231,44007 43918,43836 43744,43639 43169) Alignment (genomic DNA sequence = upper lines): GACACAGTAA GTTGTCACTG TTTTTATTTT TCATGCTCCA TCTCTGCCAT ATATGAACTC 44177 |||||| GACACA.... .......... .......... .......... .......... .......... 6 TTTTCCTTGA GGATTCTATT CCTATTATTT TCTTGAACTG GATAGCCACT CCTAAGTAAC 44117 .......... .......... .......... .......... .......... .......... 6 AAGCTGAAAC TGTGATCTTC ATTCTACATT CATCTTTCTT TCATTGTTTT CTTGCCTCAT 44057 .......... .......... .......... .......... .......... .......... 6 CCATAGAGCC TGCCAATTTA CCCACTATAT TCTTTTCATG TTTATACAGG GGGCTTTCTT 43997 | |||||||||| .......... .......... .......... .......... .........G GGGCTTTCTT 17 GGAAAAGGTC AAGTTTGACA ACCCTGGTAT ACCATGCTTC CTCTTTGGTC ATTCAACGGG 43937 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAAAAGGTC AAGTTTGACA ACCCTGGTAT ACCATGCTTC CTCTTTGGTC ATTCAACGGG 77 AGGAGCGGTG GTCTTAAAGG TAAGGCTTTT GAAGTGAAGT TAGCTTCGAC CATTCTGAAA 43877 |||||||||| ||||||||| AGGAGCGGTG GTCTTAAAG. .......... .......... .......... .......... 96 CCCTAAGTAT TTTCATTGAT TATTCTGCTC CCTTGCACAG GCAGCTTCTT ATCCACATAT 43817 |||||||||| |||||||||| .......... .......... .......... .......... GCAGCTTCTT ATCCACATAT 116 TGAAAACATG GTGGAGGGCA TCATATTGAC TTCACCAGCA TTGCGTGTGA AACCTGCAAA 43757 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAAACATG GTGGAGGGCA TCATATTGAC TTCACCAGCA TTGCGTGTGA AACCTGCAAA 176 TCCTATTGTT AGTGTAAGGC GCCTAACCCT TATATGGTTA TTTTCGTGTG CTTTGATGAA 43697 |||||||||| ||| TCCTATTGTT AGT....... .......... .......... .......... .......... 189 TGTGTTTTCA CAGCAGTGTC TTCTTTCATT AACTTTGTGT TTGTTATCGA AATGCAGGCT 43637 ||| .......... .......... .......... .......... .......... .......GCT 192 GTGGCACCAA TTTTTTCATT GGTTGCACCT AGGTACCAGT TCAAAGGTTC TCACAAAAGG 43577 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGGCACCAA TTTTTTCATT GGTTGCACCT AGGTACCAGT TCAAAGGTTC TCACAAAAGG 252 GGAATCCCTG TTTCAAGGGA TCCTGCCGCA CTGGTGGCTA AGTATTCTGA CCCTCTAGTG 43517 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAATCCCTG TTTCAAGGGA TCCTGCCGCA CTGGTGGCTA AGTATTCTGA CCCTCTAGTG 312 TATACTGGGC CTTTGAGGGT GAGGACAGGG CATGAGATTC TGCGTATCTC GTCTTACTTG 43457 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATACTGGGC CTTTGAGGGT GAGGACAGGG CATGAGATTC TGCGTATCTC GTCTTACTTG 372 ATGCGGAACT TCAAGTCAGT CACTGTCCCA TTCTTAGTCC TCCATGGATC TGCTGATAGA 43397 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGCGGAACT TCAAGTCAGT CACTGTCCCA TTCTTAGTCC TCCATGGATC TGCTGATAGA 432 GTGACTGATC CATTGGCTTC TCAAGATTTG TACAATGAGG CTGCTTCTGA ATTCAAAGAC 43337 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGACTGATC CATTGGCTTC TCAAGATTTG TACAATGAGG CTGCTTCTGA ATTCAAAGAC 492 ATTAAACTTT ATGATGGATT CTTGCACGAT CTTCTATTTG AGCCTGAGCG TGAAGAAATT 43277 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAAACTTT ATGATGGATT CTTGCACGAT CTTCTATTTG AGCCTGAGCG TGAAGAAATT 552 GCCCAGGATA TCATTGATTG GATGCACAAG AAGTTAGATT CTGGCAATCT TGCAAATGTG 43217 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCCAGGATA TCATTGATTG GATGCACAAG AAGTTAGATT CTGGCAATCT TGCAAATGTG 612 TATAGTCAGT GCTAGTTTTC TAAATCATTA GTGTTTTGAT TGATCAAA 43169 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| TATAGTCAGT GCTAGTTTTC TAAATCATTA GTGTTTTGAT TGATCAAA 660 hqPGS_C08HBa0294K15.1-_SGN-E276694+ (44236 44231,44007 43918,43836 43744,43639 43169) ******************************************************************************** EST sequence 76 +strand 242 n (File: SGN-E239892+) 1 ACAAGCTGAA ACTGTGATCT TCATTCTACA TTCATCTTTC TTTCATTGTT TTCTTGCCTC 61 ATCCATAGAG CCTGCCAATT TACCCACTAT ATTCTTTTCA TGTTTATACA GGGGGCTTTC 121 TTGGAAAAGG TCAAGTTTGA CAACCCTGGT ATACCATGCT TTCTCTTTGG TCATTCAACG 181 GGAGGAGCGG TGGTCTTAAA GGCAGCTTCT TATCCACATA TTGAAAACAT GGTGGAGGGC 241 AT Predicted gene structure (within gDNA segment 44718 to 43186): Exon 1 44118 43918 ( 201 n); cDNA 1 201 ( 201 n); score: 0.995 Intron 1 43917 43837 ( 81 n); Pd: 0.783 (s: 0.98), Pa: 0.982 (s: 1.00) Exon 2 43836 43796 ( 41 n); cDNA 202 242 ( 41 n); score: 1.000 MATCH C08HBa0294K15.1- SGN-E239892+ 0.995 242 1.000 C PGS_C08HBa0294K15.1-_SGN-E239892+ (44118 43918,43836 43796) Alignment (genomic DNA sequence = upper lines): ACAAGCTGAA ACTGTGATCT TCATTCTACA TTCATCTTTC TTTCATTGTT TTCTTGCCTC 44059 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAGCTGAA ACTGTGATCT TCATTCTACA TTCATCTTTC TTTCATTGTT TTCTTGCCTC 60 ATCCATAGAG CCTGCCAATT TACCCACTAT ATTCTTTTCA TGTTTATACA GGGGGCTTTC 43999 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCCATAGAG CCTGCCAATT TACCCACTAT ATTCTTTTCA TGTTTATACA GGGGGCTTTC 120 TTGGAAAAGG TCAAGTTTGA CAACCCTGGT ATACCATGCT TCCTCTTTGG TCATTCAACG 43939 |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| TTGGAAAAGG TCAAGTTTGA CAACCCTGGT ATACCATGCT TTCTCTTTGG TCATTCAACG 180 GGAGGAGCGG TGGTCTTAAA GGTAAGGCTT TTGAAGTGAA GTTAGCTTCG ACCATTCTGA 43879 |||||||||| |||||||||| | GGAGGAGCGG TGGTCTTAAA G......... .......... .......... .......... 201 AACCCTAAGT ATTTTCATTG ATTATTCTGC TCCCTTGCAC AGGCAGCTTC TTATCCACAT 43819 |||||||| |||||||||| .......... .......... .......... .......... ..GCAGCTTC TTATCCACAT 219 ATTGAAAACA TGGTGGAGGG CAT 43796 |||||||||| |||||||||| ||| ATTGAAAACA TGGTGGAGGG CAT 242 hqPGS_C08HBa0294K15.1-_SGN-E239892+ (44118 43918,43836 43796) ******************************************************************************** EST sequence 89 +strand 769 n (File: SGN-E261872+) 1 AAAAACCCCA TTCACAAAAG CTTCATTCTT CAATTTTCAC ATAATTTTTT TTTTCTTCAT 61 TTGATGGAAT CTTCGTTGCC GGTGGAGGAG CTTACTTCCG GCGCAAGTGG TCGGATAATT 121 CCTCTTTTCA AAAATCTTCA CCGGTCAGTT TTCTCATACC AAACTTACCG GAGACTAATT 181 ATATTTATAC AGTCTATTTT CCTATGGGTA ATTCTTCTGT CTCGACGGAG GTTCTCCACG 241 TCACCTTCGT CTCCTCCGCC TTCGCCATCT GCAGCTACTA CGGCGGTGTT GGGGAAGAGG 301 AGGAAATTTG CTTTGCGGAG GGATGAAGAG GATACGCAGA GAAGGAGGGC TCTTGCTGAG 361 GCGTTAGATA TGACGGTTGA GAATGACGGT GTGAGCTGCC GTTGGAATAC GTCTTTGTTC 421 TTTGGGGCTC GTCGGAATGC TTTGTTTTGC CGATCGTGGT TTCCGGTTAC AGATGAATTG 481 AGGGGCATAA TTATCATCAT CCATGGACTG AATGAGCACA GTGGACGATA TGCTCATTTT 541 GCTAGGCAAC TGAACTCCTG CAACTTTGGG GTGTATGCAA TGGACTGGAT AGGTCATGGA 601 CGGGAGTGAT GGATTACATG GATACGTGCC ATCTTTGGAC CATGTTGTGG CAGACACAGG 661 GGCTTTCTTG GAAAAGGTCA AGTTTGACAA CCCTGGTATA CCAGGCTTCC TCTTTGGTCA 721 TTCAACGGGG AGGAGCGGTG GTCTTAAAGG CAGCTTCTTA TCCACATAT Predicted gene structure (within gDNA segment 47505 to 43117): Exon 1 46905 46425 ( 481 n); cDNA 1 482 ( 482 n); score: 0.995 Intron 1 46424 45119 (1306 n); Pd: 0.988 (s: 1.00), Pa: 0.995 (s: 0) Exon 2 45118 45080 ( 39 n); cDNA 483 521 ( 39 n); score: 1.000 Intron 2 45079 44893 ( 187 n); Pd: 0.955 (s: 0), Pa: 0.957 (s: 1.00) Exon 3 44892 44822 ( 71 n); cDNA 522 592 ( 71 n); score: 1.000 Intron 3 44821 44296 ( 526 n); Pd: 0.951 (s: 1.00), Pa: 0.993 (s: 0.95) Exon 4 44295 44231 ( 65 n); cDNA 593 658 ( 66 n); score: 0.962 Intron 4 44230 44008 ( 223 n); Pd: 0.991 (s: 1.00), Pa: 0.993 (s: 0.98) Exon 5 44007 43918 ( 90 n); cDNA 659 749 ( 91 n); score: 0.961 Intron 5 43917 43837 ( 81 n); Pd: 0.783 (s: 0.93), Pa: 0.982 (s: 0) Exon 6 43836 43817 ( 20 n); cDNA 750 769 ( 20 n); score: 1.000 MATCH C08HBa0294K15.1- SGN-E261872+ 0.988 766 0.996 C PGS_C08HBa0294K15.1-_SGN-E261872+ (46905 46425,45118 45080,44892 44822,44295 44231,44007 43918,43836 43817) Alignment (genomic DNA sequence = upper lines): AAAAACCCCA TTCACAAAAG CTTCATTCTT CAATTTTCAC ATAA-TTTTT TTTTCTTCAT 46847 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| AAAAACCCCA TTCACAAAAG CTTCATTCTT CAATTTTCAC ATAATTTTTT TTTTCTTCAT 60 TTGATGGAAT CTTCGTTGCC GGTGGAGGAG CTTACTTCCG GCGCAAGTGG TCGGATAATT 46787 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATGGAAT CTTCGTTGCC GGTGGAGGAG CTTACTTCCG GCGCAAGTGG TCGGATAATT 120 CCTCTTTTCA AAAATCTTCA CCGGTCAGTT TTCTCATACC AAACTTACCG GAGACTAATT 46727 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCTTTTCA AAAATCTTCA CCGGTCAGTT TTCTCATACC AAACTTACCG GAGACTAATT 180 ATATTTATAC AGTCTATTTT CCTATGGGTA ATTCTTCTGT CTCGACGGAG GTTCTCCACG 46667 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATTTATAC AGTCTATTTT CCTATGGGTA ATTCTTCTGT CTCGACGGAG GTTCTCCACG 240 TCACCTTCGT CTCCTCCGCC TTCGCCATCT GCAGCTACTA CGGCGGTGTT GGGGAAGAGG 46607 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACCTTCGT CTCCTCCGCC TTCGCCATCT GCAGCTACTA CGGCGGTGTT GGGGAAGAGG 300 AGGAAATTTG CTTTGCGGAG GGATGAAGAG GATACGCAGA GAAGGAGGGC TCTTGCTGAG 46547 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGAAATTTG CTTTGCGGAG GGATGAAGAG GATACGCAGA GAAGGAGGGC TCTTGCTGAG 360 GCGTTAGATA TGACGGTTGA GAATGACGGT GTGAGCTGCC GTTGGAATAC GTCTTTGTTC 46487 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGTTAGATA TGACGGTTGA GAATGACGGT GTGAGCTGCC GTTGGAATAC GTCTTTGTTC 420 TTTGGGGCTC GTCGGAATGC TTTGTTTTGC CGATCGTGGT TTCCGGTTAC AGATGAATTG 46427 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGGGGCTC GTCGGAATGC TTTGTTTTGC CGATCGTGGT TTCCGGTTAC AGATGAATTG 480 AGGTAGGTTC ATTTTCGAAA TATTGTTATG TTTGTTTTTA TAAAGATAGA ATTGAGGTGA 46367 || AG........ .......... .......... .......... .......... .......... 482 AGGGGTTTGT AGAAGGTTGA TGGTTTATGT ATAATATAAG CAAGTCAATT TATGATAAAG 46307 .......... .......... .......... .......... .......... .......... 482 CATGAATAAA GAGGATTCAT ACAGGTAATT AATTTGGAAT TGAGTCATAC ATCATGTTTA 46247 .......... .......... .......... .......... .......... .......... 482 TTAATTTTGC AATCACGGGT GTGTGGAGGT ATGGGGATCT AATATATGGG AGGAAAAAAC 46187 .......... .......... .......... .......... .......... .......... 482 CGAATTGAAC GAATGAAGGT GTGGCCTAGT GCTCAATAAA GTGGATTGAG TTCTTAGGTT 46127 .......... .......... .......... .......... .......... .......... 482 CAAAACACTA GTGATTTCTT CCCCGTGTTT TAGCCTTGTG CGCACAAGCT GGTCTGGACG 46067 .......... .......... .......... .......... .......... .......... 482 CAAGGGTTAT CAAAATAAGA CTTTGATTTT GATACTAACT TGGCAAAGAA TTGTTCCTTC 46007 .......... .......... .......... .......... .......... .......... 482 GTCGTGTTTT GGGGGAATGG GGTGAATTGG GATATGGTTA TTTCAGCATT GAAGTATGGA 45947 .......... .......... .......... .......... .......... .......... 482 AAATATAACT GCATGGGTTC ATCACCCCTT GCTGACTTTC ATTTACCTCA AGTACAGAAG 45887 .......... .......... .......... .......... .......... .......... 482 GCAGTTAAGC ATACCCAATG AAACTATTTT TCATTTCTAT GTTAGCTTTA CCCCATGTGA 45827 .......... .......... .......... .......... .......... .......... 482 TTTATTTGAC TTGATTTTAT TAACAGATAT ACTAGGGATG CTCATTTTCA GTTTTTTCTG 45767 .......... .......... .......... .......... .......... .......... 482 ATAAATTACT CTCCTTTAAC AAGAAAATTG CAAGTATTTG AAGTGATAAT TTGTACATGA 45707 .......... .......... .......... .......... .......... .......... 482 GTATCTTATT TTGTTTGTGC ATGGTCGTTT TATATTGCAT ATGAGAACAA ATAGACATGA 45647 .......... .......... .......... .......... .......... .......... 482 ATTTGATTGG CAAGTTAAGA GCATTAATAT TGAGTTTTTA AAATTATTCT ACTTTGCTAG 45587 .......... .......... .......... .......... .......... .......... 482 GACATGAAAT GCAAGCCAGA ATCTACCAGT GATCAAATGT GTTTTACTGC TTTCATCAGG 45527 .......... .......... .......... .......... .......... .......... 482 AAAAAGGCTT AGGTTGAATT TCCTAGACTT GGCTTCACGT TTTAGACAAT TCCTCCTTAA 45467 .......... .......... .......... .......... .......... .......... 482 ATCCTTTAAG GTAGAGTGCT ATCTTAGAAG GCGAGTGATT TCCATTTGAA TAGATCGATC 45407 .......... .......... .......... .......... .......... .......... 482 AATATTAGAC TTATAAGAGA AAACTAAAAA CTGTGCATCA CTATTGCTCC TGATCATAGT 45347 .......... .......... .......... .......... .......... .......... 482 AATCCTAAGC TTGTTATAGA ACATTAGGAA TACCCTTTCT CTTTTTATTG CTAAGGCTGA 45287 .......... .......... .......... .......... .......... .......... 482 GTCTGATAAT TTGACAAAAT TCACTCACTT TGTTGGGGTA TTAAGGAGCA GTAGTGCTGC 45227 .......... .......... .......... .......... .......... .......... 482 AAGTTCTGAT ATTTATGTTT GCTAATCTAC TATAAATTGA CCATCTCTCT TTTAATGTTT 45167 .......... .......... .......... .......... .......... .......... 482 TAGTGTTTTT CTTTAATTGT TTCTTAATGG ACGGATTTTT CGTTTCAGGG GCATAATTAT 45107 || |||||||||| .......... .......... .......... .......... ........GG GCATAATTAT 494 CATCATCCAT GGACTGAATG AGCACAGGTA ACTGTTCATT GACTTTTGAA AATAAAATGT 45047 |||||||||| |||||||||| ||||||| CATCATCCAT GGACTGAATG AGCACAG... .......... .......... .......... 521 TGGGAGGAGA GGGGTAGCTG TTTTTTTTTT TTTTTGAAGA ATAGGTGTTT TTGCTAATGC 44987 .......... .......... .......... .......... .......... .......... 521 GAGTTGTTTA AGCCTTCTCA GTTCAGTATT GAGTACAGAA CAAATGTTGG CTTAACTAGT 44927 .......... .......... .......... .......... .......... .......... 521 TGGATGACGA TATTCCTTTT ATATTTCATT TCAGTGGACG ATATGCTCAT TTTGCTAGGC 44867 |||||| |||||||||| |||||||||| .......... .......... .......... ....TGGACG ATATGCTCAT TTTGCTAGGC 547 AACTGAACTC CTGCAACTTT GGGGTGTATG CAATGGACTG GATAGGTACT TTTATCCTTC 44807 |||||||||| |||||||||| |||||||||| |||||||||| ||||| AACTGAACTC CTGCAACTTT GGGGTGTATG CAATGGACTG GATAG..... .......... 592 ATTTTGAAGA CCTTGTTTAA ATTGGTTAGA GGTCCTGTAG TGACCACTTT ATGATCGCAC 44747 .......... .......... .......... .......... .......... .......... 592 ATTCTAGTAT TTCACTCTAA TCATGTGAAA GGGTAACACA GTCATTCTTA GGATGCTAAA 44687 .......... .......... .......... .......... .......... .......... 592 ACAAACTTGC CTTATCGTTA GAATGGCTAC CAAAAGGTCA ATTATGGAAG AGTGTGTGTA 44627 .......... .......... .......... .......... .......... .......... 592 TAACTTCATC ATTTTCTTTC TCATTGTGTC TGTTCAATCG TGGTCCTTTC TTTATATTCT 44567 .......... .......... .......... .......... .......... .......... 592 TTTCCATGGA TGAAGTTGGT CCTTTTTTCC CTGATGTTTC TTTACTAGAT AGCCTCTTAT 44507 .......... .......... .......... .......... .......... .......... 592 CAGGATTATA CTTCTCTCAC AGATACCTCA CAAAGTTTGT TCTTCTTCTA AAATGTGTTG 44447 .......... .......... .......... .......... .......... .......... 592 ATTTTGGGCT ACATGCATTA AGTATGTCTT CCTCTGATTC ATGGATAATT AAATAAGCTT 44387 .......... .......... .......... .......... .......... .......... 592 CTCTGAGCTG ATTGTTATGA TTGATTATGC TAGTAGTCAA AGTGGATGGT TGATACTTCT 44327 .......... .......... .......... .......... .......... .......... 592 TAACAAATGA CAGAGTTATT CTGTGTGACA GGTCATGGA- GGGAGTGATG GATTACATGG 44268 |||||||| |||||||||| |||||||||| .......... .......... .......... .GTCATGGAC GGGAGTGATG GATTACATGG 621 ATACGTGCCA TCTTTGGACC ATGTTGTGGC AGACACAGTA AGTTGTCACT GTTTTTATTT 44208 |||||||||| |||||||||| |||||||||| ||||||| ATACGTGCCA TCTTTGGACC ATGTTGTGGC AGACACA... .......... .......... 658 TTCATGCTCC ATCTCTGCCA TATATGAACT CTTTTCCTTG AGGATTCTAT TCCTATTATT 44148 .......... .......... .......... .......... .......... .......... 658 TTCTTGAACT GGATAGCCAC TCCTAAGTAA CAAGCTGAAA CTGTGATCTT CATTCTACAT 44088 .......... .......... .......... .......... .......... .......... 658 TCATCTTTCT TTCATTGTTT TCTTGCCTCA TCCATAGAGC CTGCCAATTT ACCCACTATA 44028 .......... .......... .......... .......... .......... .......... 658 TTCTTTTCAT GTTTATACAG GGGGCTTTCT TGGAAAAGGT CAAGTTTGAC AACCCTGGTA 43968 |||||||||| |||||||||| |||||||||| |||||||||| .......... .......... GGGGCTTTCT TGGAAAAGGT CAAGTTTGAC AACCCTGGTA 698 TACCATGCTT CCTCTTTGGT CATTCAAC-G GGAGGAGCGG TGGTCTTAAA GGTAAGGCTT 43909 ||||| |||| |||||||||| |||||||| | |||||||||| |||||||||| | TACCAGGCTT CCTCTTTGGT CATTCAACGG GGAGGAGCGG TGGTCTTAAA G......... 749 TTGAAGTGAA GTTAGCTTCG ACCATTCTGA AACCCTAAGT ATTTTCATTG ATTATTCTGC 43849 .......... .......... .......... .......... .......... .......... 749 TCCCTTGCAC AGGCAGCTTC TTATCCACAT AT 43817 |||||||| |||||||||| || .......... ..GCAGCTTC TTATCCACAT AT 769 hqPGS_C08HBa0294K15.1-_SGN-E261872+ (46905 46425,45118 45080,44892 44822,44295 44231,44007 43918,43836 43817) ******************************************************************************** EST sequence 147 +strand 721 n (File: SGN-E258769+) 1 AAAAACCCCA TTCACAAAAG CTTCATTCTT CAATTTTCAC ATAATTTTTT TTTTCTTCAT 61 TTGATGGAAT CTTCGTTGCC GGTGGAGGAG CTTACTTCCG GCGCAAGTGG TCGGATAATT 121 CCTCTTTTCA AAAATCTTCA CCGGTCAGTT TTCTCATACC AAACTTACCG GAGACTAATT 181 ATATTTATAC AGTCTATTTT CCTATGGGTA ATTCTTCTGT CTCGACGGAG GTTCTCCACG 241 TCACCTTCGT CTCCTCCGCC TTCGCCATCT GCAGCTACTA CGGCGGTGTT GGGGAAGAGG 301 AGGAAATTTG CTTTGCGGAG GGATGAAGAG GATACGCAGA GAAGGAGGGC TCTTGCTGAG 361 GCGTTAGATA TGACGGTTGA GAATGACGGT GTGAGCTGCC GTTGGAATAC GTCTTTGTTC 421 TTTGGGGCTC GTCGGAATGC TTTGTTTTGC CGATCGTGGT TTCCGGTTAC AGATGAATTG 481 AGGGGCATAA TTATCATCAT CCATGGACTG AATGAGCACA GTGGACGATA TGCTCATTTT 541 GCTAGGCAAC TGAACTCCTG CAACTTTGGG GTGTATGCAA TGGACTGGAT AGGTCATGGA 601 GGGAGTGATG GATTACATGG ATACGTGCCA TCTTTGGAAC ATGTTGTGGC AGACACAGGG 661 GCTTTCTTGG AAAAGTCAAG TTTGACAACC CTGGTATACA TGCTTCCTCT TTGGTCATTC 721 A Predicted gene structure (within gDNA segment 47505 to 43332): Exon 1 46905 46425 ( 481 n); cDNA 1 482 ( 482 n); score: 0.995 Intron 1 46424 45119 (1306 n); Pd: 0.988 (s: 1.00), Pa: 0.995 (s: 0) Exon 2 45118 45080 ( 39 n); cDNA 483 521 ( 39 n); score: 1.000 Intron 2 45079 44893 ( 187 n); Pd: 0.955 (s: 0), Pa: 0.957 (s: 1.00) Exon 3 44892 44822 ( 71 n); cDNA 522 592 ( 71 n); score: 1.000 Intron 3 44821 44296 ( 526 n); Pd: 0.951 (s: 1.00), Pa: 0.993 (s: 0.98) Exon 4 44295 44231 ( 65 n); cDNA 593 657 ( 65 n); score: 0.985 Intron 4 44230 44008 ( 223 n); Pd: 0.991 (s: 0.98), Pa: 0.993 (s: 0.96) Exon 5 44007 43942 ( 66 n); cDNA 658 721 ( 64 n); score: 0.970 MATCH C08HBa0294K15.1- SGN-E258769+ 0.992 722 1.001 C PGS_C08HBa0294K15.1-_SGN-E258769+ (46905 46425,45118 45080,44892 44822,44295 44231,44007 43942) Alignment (genomic DNA sequence = upper lines): AAAAACCCCA TTCACAAAAG CTTCATTCTT CAATTTTCAC ATAA-TTTTT TTTTCTTCAT 46847 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| AAAAACCCCA TTCACAAAAG CTTCATTCTT CAATTTTCAC ATAATTTTTT TTTTCTTCAT 60 TTGATGGAAT CTTCGTTGCC GGTGGAGGAG CTTACTTCCG GCGCAAGTGG TCGGATAATT 46787 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATGGAAT CTTCGTTGCC GGTGGAGGAG CTTACTTCCG GCGCAAGTGG TCGGATAATT 120 CCTCTTTTCA AAAATCTTCA CCGGTCAGTT TTCTCATACC AAACTTACCG GAGACTAATT 46727 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCTTTTCA AAAATCTTCA CCGGTCAGTT TTCTCATACC AAACTTACCG GAGACTAATT 180 ATATTTATAC AGTCTATTTT CCTATGGGTA ATTCTTCTGT CTCGACGGAG GTTCTCCACG 46667 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATTTATAC AGTCTATTTT CCTATGGGTA ATTCTTCTGT CTCGACGGAG GTTCTCCACG 240 TCACCTTCGT CTCCTCCGCC TTCGCCATCT GCAGCTACTA CGGCGGTGTT GGGGAAGAGG 46607 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACCTTCGT CTCCTCCGCC TTCGCCATCT GCAGCTACTA CGGCGGTGTT GGGGAAGAGG 300 AGGAAATTTG CTTTGCGGAG GGATGAAGAG GATACGCAGA GAAGGAGGGC TCTTGCTGAG 46547 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGAAATTTG CTTTGCGGAG GGATGAAGAG GATACGCAGA GAAGGAGGGC TCTTGCTGAG 360 GCGTTAGATA TGACGGTTGA GAATGACGGT GTGAGCTGCC GTTGGAATAC GTCTTTGTTC 46487 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGTTAGATA TGACGGTTGA GAATGACGGT GTGAGCTGCC GTTGGAATAC GTCTTTGTTC 420 TTTGGGGCTC GTCGGAATGC TTTGTTTTGC CGATCGTGGT TTCCGGTTAC AGATGAATTG 46427 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGGGGCTC GTCGGAATGC TTTGTTTTGC CGATCGTGGT TTCCGGTTAC AGATGAATTG 480 AGGTAGGTTC ATTTTCGAAA TATTGTTATG TTTGTTTTTA TAAAGATAGA ATTGAGGTGA 46367 || AG........ .......... .......... .......... .......... .......... 482 AGGGGTTTGT AGAAGGTTGA TGGTTTATGT ATAATATAAG CAAGTCAATT TATGATAAAG 46307 .......... .......... .......... .......... .......... .......... 482 CATGAATAAA GAGGATTCAT ACAGGTAATT AATTTGGAAT TGAGTCATAC ATCATGTTTA 46247 .......... .......... .......... .......... .......... .......... 482 TTAATTTTGC AATCACGGGT GTGTGGAGGT ATGGGGATCT AATATATGGG AGGAAAAAAC 46187 .......... .......... .......... .......... .......... .......... 482 CGAATTGAAC GAATGAAGGT GTGGCCTAGT GCTCAATAAA GTGGATTGAG TTCTTAGGTT 46127 .......... .......... .......... .......... .......... .......... 482 CAAAACACTA GTGATTTCTT CCCCGTGTTT TAGCCTTGTG CGCACAAGCT GGTCTGGACG 46067 .......... .......... .......... .......... .......... .......... 482 CAAGGGTTAT CAAAATAAGA CTTTGATTTT GATACTAACT TGGCAAAGAA TTGTTCCTTC 46007 .......... .......... .......... .......... .......... .......... 482 GTCGTGTTTT GGGGGAATGG GGTGAATTGG GATATGGTTA TTTCAGCATT GAAGTATGGA 45947 .......... .......... .......... .......... .......... .......... 482 AAATATAACT GCATGGGTTC ATCACCCCTT GCTGACTTTC ATTTACCTCA AGTACAGAAG 45887 .......... .......... .......... .......... .......... .......... 482 GCAGTTAAGC ATACCCAATG AAACTATTTT TCATTTCTAT GTTAGCTTTA CCCCATGTGA 45827 .......... .......... .......... .......... .......... .......... 482 TTTATTTGAC TTGATTTTAT TAACAGATAT ACTAGGGATG CTCATTTTCA GTTTTTTCTG 45767 .......... .......... .......... .......... .......... .......... 482 ATAAATTACT CTCCTTTAAC AAGAAAATTG CAAGTATTTG AAGTGATAAT TTGTACATGA 45707 .......... .......... .......... .......... .......... .......... 482 GTATCTTATT TTGTTTGTGC ATGGTCGTTT TATATTGCAT ATGAGAACAA ATAGACATGA 45647 .......... .......... .......... .......... .......... .......... 482 ATTTGATTGG CAAGTTAAGA GCATTAATAT TGAGTTTTTA AAATTATTCT ACTTTGCTAG 45587 .......... .......... .......... .......... .......... .......... 482 GACATGAAAT GCAAGCCAGA ATCTACCAGT GATCAAATGT GTTTTACTGC TTTCATCAGG 45527 .......... .......... .......... .......... .......... .......... 482 AAAAAGGCTT AGGTTGAATT TCCTAGACTT GGCTTCACGT TTTAGACAAT TCCTCCTTAA 45467 .......... .......... .......... .......... .......... .......... 482 ATCCTTTAAG GTAGAGTGCT ATCTTAGAAG GCGAGTGATT TCCATTTGAA TAGATCGATC 45407 .......... .......... .......... .......... .......... .......... 482 AATATTAGAC TTATAAGAGA AAACTAAAAA CTGTGCATCA CTATTGCTCC TGATCATAGT 45347 .......... .......... .......... .......... .......... .......... 482 AATCCTAAGC TTGTTATAGA ACATTAGGAA TACCCTTTCT CTTTTTATTG CTAAGGCTGA 45287 .......... .......... .......... .......... .......... .......... 482 GTCTGATAAT TTGACAAAAT TCACTCACTT TGTTGGGGTA TTAAGGAGCA GTAGTGCTGC 45227 .......... .......... .......... .......... .......... .......... 482 AAGTTCTGAT ATTTATGTTT GCTAATCTAC TATAAATTGA CCATCTCTCT TTTAATGTTT 45167 .......... .......... .......... .......... .......... .......... 482 TAGTGTTTTT CTTTAATTGT TTCTTAATGG ACGGATTTTT CGTTTCAGGG GCATAATTAT 45107 || |||||||||| .......... .......... .......... .......... ........GG GCATAATTAT 494 CATCATCCAT GGACTGAATG AGCACAGGTA ACTGTTCATT GACTTTTGAA AATAAAATGT 45047 |||||||||| |||||||||| ||||||| CATCATCCAT GGACTGAATG AGCACAG... .......... .......... .......... 521 TGGGAGGAGA GGGGTAGCTG TTTTTTTTTT TTTTTGAAGA ATAGGTGTTT TTGCTAATGC 44987 .......... .......... .......... .......... .......... .......... 521 GAGTTGTTTA AGCCTTCTCA GTTCAGTATT GAGTACAGAA CAAATGTTGG CTTAACTAGT 44927 .......... .......... .......... .......... .......... .......... 521 TGGATGACGA TATTCCTTTT ATATTTCATT TCAGTGGACG ATATGCTCAT TTTGCTAGGC 44867 |||||| |||||||||| |||||||||| .......... .......... .......... ....TGGACG ATATGCTCAT TTTGCTAGGC 547 AACTGAACTC CTGCAACTTT GGGGTGTATG CAATGGACTG GATAGGTACT TTTATCCTTC 44807 |||||||||| |||||||||| |||||||||| |||||||||| ||||| AACTGAACTC CTGCAACTTT GGGGTGTATG CAATGGACTG GATAG..... .......... 592 ATTTTGAAGA CCTTGTTTAA ATTGGTTAGA GGTCCTGTAG TGACCACTTT ATGATCGCAC 44747 .......... .......... .......... .......... .......... .......... 592 ATTCTAGTAT TTCACTCTAA TCATGTGAAA GGGTAACACA GTCATTCTTA GGATGCTAAA 44687 .......... .......... .......... .......... .......... .......... 592 ACAAACTTGC CTTATCGTTA GAATGGCTAC CAAAAGGTCA ATTATGGAAG AGTGTGTGTA 44627 .......... .......... .......... .......... .......... .......... 592 TAACTTCATC ATTTTCTTTC TCATTGTGTC TGTTCAATCG TGGTCCTTTC TTTATATTCT 44567 .......... .......... .......... .......... .......... .......... 592 TTTCCATGGA TGAAGTTGGT CCTTTTTTCC CTGATGTTTC TTTACTAGAT AGCCTCTTAT 44507 .......... .......... .......... .......... .......... .......... 592 CAGGATTATA CTTCTCTCAC AGATACCTCA CAAAGTTTGT TCTTCTTCTA AAATGTGTTG 44447 .......... .......... .......... .......... .......... .......... 592 ATTTTGGGCT ACATGCATTA AGTATGTCTT CCTCTGATTC ATGGATAATT AAATAAGCTT 44387 .......... .......... .......... .......... .......... .......... 592 CTCTGAGCTG ATTGTTATGA TTGATTATGC TAGTAGTCAA AGTGGATGGT TGATACTTCT 44327 .......... .......... .......... .......... .......... .......... 592 TAACAAATGA CAGAGTTATT CTGTGTGACA GGTCATGGAG GGAGTGATGG ATTACATGGA 44267 ||||||||| |||||||||| |||||||||| .......... .......... .......... .GTCATGGAG GGAGTGATGG ATTACATGGA 621 TACGTGCCAT CTTTGGACCA TGTTGTGGCA GACACAGTAA GTTGTCACTG TTTTTATTTT 44207 |||||||||| ||||||| || |||||||||| |||||| TACGTGCCAT CTTTGGAACA TGTTGTGGCA GACACA.... .......... .......... 657 TCATGCTCCA TCTCTGCCAT ATATGAACTC TTTTCCTTGA GGATTCTATT CCTATTATTT 44147 .......... .......... .......... .......... .......... .......... 657 TCTTGAACTG GATAGCCACT CCTAAGTAAC AAGCTGAAAC TGTGATCTTC ATTCTACATT 44087 .......... .......... .......... .......... .......... .......... 657 CATCTTTCTT TCATTGTTTT CTTGCCTCAT CCATAGAGCC TGCCAATTTA CCCACTATAT 44027 .......... .......... .......... .......... .......... .......... 657 TCTTTTCATG TTTATACAGG GGGCTTTCTT GGAAAAGGTC AAGTTTGACA ACCCTGGTAT 43967 | |||||||||| |||||| ||| |||||||||| |||||||||| .......... .........G GGGCTTTCTT GGAAAA-GTC AAGTTTGACA ACCCTGGTAT 697 ACCATGCTTC CTCTTTGGTC ATTCA 43942 | |||||||| |||||||||| ||||| A-CATGCTTC CTCTTTGGTC ATTCA 721 hqPGS_C08HBa0294K15.1-_SGN-E258769+ (46905 46425,45118 45080,44892 44822,44295 44231,44007 43942) ******************************************************************************** EST sequence 138 +strand 615 n (File: SGN-E207363+) 1 AAAGCTTCAT TCTTCAATTT TCACATAATT TTTTTTTCTT CATTTGATGG AATCTTCGTT 61 GCCGGTGGAG GAGCTTACTT CCGGCGCAAG TGGTCGGATA ATTCCTCTTT TCAAAAATCT 121 TCACCGGTCA GTTTTCTCAT ACCAAACTTA CCGGAGACTA ATTATATTTA TACAGTCTAT 181 TTTCCTATGG GTAATTCTTC TGTCTCGACG GAGGTTCTCC ACGTCACCTT CGTCTCCTCC 241 GCCTTCGCCA TCTGCAGCTA CTACGGCGGT GTTGGGGAAG AGGAGGAAAT TTGCTTTGCG 301 GAGGGATGAA GAGGATACGC AGAGAAGGAG GGCTCTTGCT GAGGCGTTAG ATATGACGGT 361 TGAGAATGAC GGTGTGAGCT GCCGTTGGAA TACGTCTTTG TTCTTTGGGG CTCGTCGGAA 421 TGCTTTGTTT TGCCGATCGT GGTTTCCGGT TACAGATGAA TTGAGGGGCA TAATTATCAT 481 CATCCATGGA CTGAATGAGC ACAGTGGACG ATATGCTCAT TATGCTAGGC AACTGAACTC 541 CTGCAACTTT GGGGTGTATG CAATGGACTG GATAGGTCAT GGAGGGAGTG ATGGATTACA 601 TGGATACGTG CCATC Predicted gene structure (within gDNA segment 47489 to 43646): Exon 1 46889 46425 ( 465 n); cDNA 1 465 ( 465 n); score: 1.000 Intron 1 46424 45119 (1306 n); Pd: 0.988 (s: 1.00), Pa: 0.995 (s: 0) Exon 2 45118 45080 ( 39 n); cDNA 466 504 ( 39 n); score: 1.000 Intron 2 45079 44893 ( 187 n); Pd: 0.955 (s: 0), Pa: 0.957 (s: 0.98) Exon 3 44892 44822 ( 71 n); cDNA 505 575 ( 71 n); score: 0.986 Intron 3 44821 44296 ( 526 n); Pd: 0.951 (s: 1.00), Pa: 0.993 (s: 1.00) Exon 4 44295 44256 ( 40 n); cDNA 576 615 ( 40 n); score: 1.000 MATCH C08HBa0294K15.1- SGN-E207363+ 0.998 615 1.000 C PGS_C08HBa0294K15.1-_SGN-E207363+ (46889 46425,45118 45080,44892 44822,44295 44256) Alignment (genomic DNA sequence = upper lines): AAAGCTTCAT TCTTCAATTT TCACATAATT TTTTTTTCTT CATTTGATGG AATCTTCGTT 46830 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGCTTCAT TCTTCAATTT TCACATAATT TTTTTTTCTT CATTTGATGG AATCTTCGTT 60 GCCGGTGGAG GAGCTTACTT CCGGCGCAAG TGGTCGGATA ATTCCTCTTT TCAAAAATCT 46770 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCGGTGGAG GAGCTTACTT CCGGCGCAAG TGGTCGGATA ATTCCTCTTT TCAAAAATCT 120 TCACCGGTCA GTTTTCTCAT ACCAAACTTA CCGGAGACTA ATTATATTTA TACAGTCTAT 46710 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACCGGTCA GTTTTCTCAT ACCAAACTTA CCGGAGACTA ATTATATTTA TACAGTCTAT 180 TTTCCTATGG GTAATTCTTC TGTCTCGACG GAGGTTCTCC ACGTCACCTT CGTCTCCTCC 46650 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCCTATGG GTAATTCTTC TGTCTCGACG GAGGTTCTCC ACGTCACCTT CGTCTCCTCC 240 GCCTTCGCCA TCTGCAGCTA CTACGGCGGT GTTGGGGAAG AGGAGGAAAT TTGCTTTGCG 46590 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCTTCGCCA TCTGCAGCTA CTACGGCGGT GTTGGGGAAG AGGAGGAAAT TTGCTTTGCG 300 GAGGGATGAA GAGGATACGC AGAGAAGGAG GGCTCTTGCT GAGGCGTTAG ATATGACGGT 46530 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGGGATGAA GAGGATACGC AGAGAAGGAG GGCTCTTGCT GAGGCGTTAG ATATGACGGT 360 TGAGAATGAC GGTGTGAGCT GCCGTTGGAA TACGTCTTTG TTCTTTGGGG CTCGTCGGAA 46470 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAGAATGAC GGTGTGAGCT GCCGTTGGAA TACGTCTTTG TTCTTTGGGG CTCGTCGGAA 420 TGCTTTGTTT TGCCGATCGT GGTTTCCGGT TACAGATGAA TTGAGGTAGG TTCATTTTCG 46410 |||||||||| |||||||||| |||||||||| |||||||||| ||||| TGCTTTGTTT TGCCGATCGT GGTTTCCGGT TACAGATGAA TTGAG..... .......... 465 AAATATTGTT ATGTTTGTTT TTATAAAGAT AGAATTGAGG TGAAGGGGTT TGTAGAAGGT 46350 .......... .......... .......... .......... .......... .......... 465 TGATGGTTTA TGTATAATAT AAGCAAGTCA ATTTATGATA AAGCATGAAT AAAGAGGATT 46290 .......... .......... .......... .......... .......... .......... 465 CATACAGGTA ATTAATTTGG AATTGAGTCA TACATCATGT TTATTAATTT TGCAATCACG 46230 .......... .......... .......... .......... .......... .......... 465 GGTGTGTGGA GGTATGGGGA TCTAATATAT GGGAGGAAAA AACCGAATTG AACGAATGAA 46170 .......... .......... .......... .......... .......... .......... 465 GGTGTGGCCT AGTGCTCAAT AAAGTGGATT GAGTTCTTAG GTTCAAAACA CTAGTGATTT 46110 .......... .......... .......... .......... .......... .......... 465 CTTCCCCGTG TTTTAGCCTT GTGCGCACAA GCTGGTCTGG ACGCAAGGGT TATCAAAATA 46050 .......... .......... .......... .......... .......... .......... 465 AGACTTTGAT TTTGATACTA ACTTGGCAAA GAATTGTTCC TTCGTCGTGT TTTGGGGGAA 45990 .......... .......... .......... .......... .......... .......... 465 TGGGGTGAAT TGGGATATGG TTATTTCAGC ATTGAAGTAT GGAAAATATA ACTGCATGGG 45930 .......... .......... .......... .......... .......... .......... 465 TTCATCACCC CTTGCTGACT TTCATTTACC TCAAGTACAG AAGGCAGTTA AGCATACCCA 45870 .......... .......... .......... .......... .......... .......... 465 ATGAAACTAT TTTTCATTTC TATGTTAGCT TTACCCCATG TGATTTATTT GACTTGATTT 45810 .......... .......... .......... .......... .......... .......... 465 TATTAACAGA TATACTAGGG ATGCTCATTT TCAGTTTTTT CTGATAAATT ACTCTCCTTT 45750 .......... .......... .......... .......... .......... .......... 465 AACAAGAAAA TTGCAAGTAT TTGAAGTGAT AATTTGTACA TGAGTATCTT ATTTTGTTTG 45690 .......... .......... .......... .......... .......... .......... 465 TGCATGGTCG TTTTATATTG CATATGAGAA CAAATAGACA TGAATTTGAT TGGCAAGTTA 45630 .......... .......... .......... .......... .......... .......... 465 AGAGCATTAA TATTGAGTTT TTAAAATTAT TCTACTTTGC TAGGACATGA AATGCAAGCC 45570 .......... .......... .......... .......... .......... .......... 465 AGAATCTACC AGTGATCAAA TGTGTTTTAC TGCTTTCATC AGGAAAAAGG CTTAGGTTGA 45510 .......... .......... .......... .......... .......... .......... 465 ATTTCCTAGA CTTGGCTTCA CGTTTTAGAC AATTCCTCCT TAAATCCTTT AAGGTAGAGT 45450 .......... .......... .......... .......... .......... .......... 465 GCTATCTTAG AAGGCGAGTG ATTTCCATTT GAATAGATCG ATCAATATTA GACTTATAAG 45390 .......... .......... .......... .......... .......... .......... 465 AGAAAACTAA AAACTGTGCA TCACTATTGC TCCTGATCAT AGTAATCCTA AGCTTGTTAT 45330 .......... .......... .......... .......... .......... .......... 465 AGAACATTAG GAATACCCTT TCTCTTTTTA TTGCTAAGGC TGAGTCTGAT AATTTGACAA 45270 .......... .......... .......... .......... .......... .......... 465 AATTCACTCA CTTTGTTGGG GTATTAAGGA GCAGTAGTGC TGCAAGTTCT GATATTTATG 45210 .......... .......... .......... .......... .......... .......... 465 TTTGCTAATC TACTATAAAT TGACCATCTC TCTTTTAATG TTTTAGTGTT TTTCTTTAAT 45150 .......... .......... .......... .......... .......... .......... 465 TGTTTCTTAA TGGACGGATT TTTCGTTTCA GGGGCATAAT TATCATCATC CATGGACTGA 45090 ||||||||| |||||||||| |||||||||| .......... .......... .......... .GGGCATAAT TATCATCATC CATGGACTGA 494 ATGAGCACAG GTAACTGTTC ATTGACTTTT GAAAATAAAA TGTTGGGAGG AGAGGGGTAG 45030 |||||||||| ATGAGCACAG .......... .......... .......... .......... .......... 504 CTGTTTTTTT TTTTTTTTGA AGAATAGGTG TTTTTGCTAA TGCGAGTTGT TTAAGCCTTC 44970 .......... .......... .......... .......... .......... .......... 504 TCAGTTCAGT ATTGAGTACA GAACAAATGT TGGCTTAACT AGTTGGATGA CGATATTCCT 44910 .......... .......... .......... .......... .......... .......... 504 TTTATATTTC ATTTCAGTGG ACGATATGCT CATTTTGCTA GGCAACTGAA CTCCTGCAAC 44850 ||| |||||||||| |||| ||||| |||||||||| |||||||||| .......... .......TGG ACGATATGCT CATTATGCTA GGCAACTGAA CTCCTGCAAC 547 TTTGGGGTGT ATGCAATGGA CTGGATAGGT ACTTTTATCC TTCATTTTGA AGACCTTGTT 44790 |||||||||| |||||||||| |||||||| TTTGGGGTGT ATGCAATGGA CTGGATAG.. .......... .......... .......... 575 TAAATTGGTT AGAGGTCCTG TAGTGACCAC TTTATGATCG CACATTCTAG TATTTCACTC 44730 .......... .......... .......... .......... .......... .......... 575 TAATCATGTG AAAGGGTAAC ACAGTCATTC TTAGGATGCT AAAACAAACT TGCCTTATCG 44670 .......... .......... .......... .......... .......... .......... 575 TTAGAATGGC TACCAAAAGG TCAATTATGG AAGAGTGTGT GTATAACTTC ATCATTTTCT 44610 .......... .......... .......... .......... .......... .......... 575 TTCTCATTGT GTCTGTTCAA TCGTGGTCCT TTCTTTATAT TCTTTTCCAT GGATGAAGTT 44550 .......... .......... .......... .......... .......... .......... 575 GGTCCTTTTT TCCCTGATGT TTCTTTACTA GATAGCCTCT TATCAGGATT ATACTTCTCT 44490 .......... .......... .......... .......... .......... .......... 575 CACAGATACC TCACAAAGTT TGTTCTTCTT CTAAAATGTG TTGATTTTGG GCTACATGCA 44430 .......... .......... .......... .......... .......... .......... 575 TTAAGTATGT CTTCCTCTGA TTCATGGATA ATTAAATAAG CTTCTCTGAG CTGATTGTTA 44370 .......... .......... .......... .......... .......... .......... 575 TGATTGATTA TGCTAGTAGT CAAAGTGGAT GGTTGATACT TCTTAACAAA TGACAGAGTT 44310 .......... .......... .......... .......... .......... .......... 575 ATTCTGTGTG ACAGGTCATG GAGGGAGTGA TGGATTACAT GGATACGTGC CATC 44256 |||||| |||||||||| |||||||||| |||||||||| |||| .......... ....GTCATG GAGGGAGTGA TGGATTACAT GGATACGTGC CATC 615 hqPGS_C08HBa0294K15.1-_SGN-E207363+ (46889 46425,45118 45080,44892 44822,44295 44256) ******************************************************************************** EST sequence 85 +strand 491 n (File: SGN-E202493+) 1 TTCAATTTTC ACATAATTTT TTTTTCTTCA TTTGATGGAA TCTTCGTTGC CGGTGGAGGA 61 GCTTACTTCC GGCGCAAGTG GTCGGATAAT TCCTCTTTTC AAAAATCTTC ACCGGTCAGT 121 TTTCTCATAC CAAACTTACC GGAGACTAAT TATATTTATA CAGTCTATTT TCCTATGGGT 181 AATTCTTCTG TCTCGACGGA GGTTCTCCAC GTCACCTTCG TCTCCTCCGC CTTCGCCATC 241 TGCAGCTACT ACGGCGGTGT TGGGGAAGAG GAGGAAATTT GCTTTGCGGA GGGATGAAGA 301 GGATACGCAG AGAAGGAGGG CTCTTGCTGA GGCGTTAGAT ATGACGGTTG AGAATGACGG 361 TGTGAGCTGC CGCTGGAATA CGTCTTTGTT CTTTGGGGCT CGTCGGAATG CTTTGCTATG 421 CCGATCGTGG TTTCCGGTTA CAGATGAATT GAGGGGCATA ATTATCATCA TCCATGGACT 481 GAATGAGCAC A Predicted gene structure (within gDNA segment 47477 to 44471): Exon 1 46877 46425 ( 453 n); cDNA 1 453 ( 453 n); score: 0.993 Intron 1 46424 45119 (1306 n); Pd: 0.988 (s: 0.96), Pa: 0.995 (s: 0) Exon 2 45118 45081 ( 38 n); cDNA 454 491 ( 38 n); score: 1.000 MATCH C08HBa0294K15.1- SGN-E202493+ 0.993 491 1.000 C PGS_C08HBa0294K15.1-_SGN-E202493+ (46877 46425,45118 45081) Alignment (genomic DNA sequence = upper lines): TTCAATTTTC ACATAATTTT TTTTTCTTCA TTTGATGGAA TCTTCGTTGC CGGTGGAGGA 46818 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCAATTTTC ACATAATTTT TTTTTCTTCA TTTGATGGAA TCTTCGTTGC CGGTGGAGGA 60 GCTTACTTCC GGCGCAAGTG GTCGGATAAT TCCTCTTTTC AAAAATCTTC ACCGGTCAGT 46758 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTTACTTCC GGCGCAAGTG GTCGGATAAT TCCTCTTTTC AAAAATCTTC ACCGGTCAGT 120 TTTCTCATAC CAAACTTACC GGAGACTAAT TATATTTATA CAGTCTATTT TCCTATGGGT 46698 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCTCATAC CAAACTTACC GGAGACTAAT TATATTTATA CAGTCTATTT TCCTATGGGT 180 AATTCTTCTG TCTCGACGGA GGTTCTCCAC GTCACCTTCG TCTCCTCCGC CTTCGCCATC 46638 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTCTTCTG TCTCGACGGA GGTTCTCCAC GTCACCTTCG TCTCCTCCGC CTTCGCCATC 240 TGCAGCTACT ACGGCGGTGT TGGGGAAGAG GAGGAAATTT GCTTTGCGGA GGGATGAAGA 46578 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCAGCTACT ACGGCGGTGT TGGGGAAGAG GAGGAAATTT GCTTTGCGGA GGGATGAAGA 300 GGATACGCAG AGAAGGAGGG CTCTTGCTGA GGCGTTAGAT ATGACGGTTG AGAATGACGG 46518 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGATACGCAG AGAAGGAGGG CTCTTGCTGA GGCGTTAGAT ATGACGGTTG AGAATGACGG 360 TGTGAGCTGC CGTTGGAATA CGTCTTTGTT CTTTGGGGCT CGTCGGAATG CTTTGTTTTG 46458 |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| ||||| | || TGTGAGCTGC CGCTGGAATA CGTCTTTGTT CTTTGGGGCT CGTCGGAATG CTTTGCTATG 420 CCGATCGTGG TTTCCGGTTA CAGATGAATT GAGGTAGGTT CATTTTCGAA ATATTGTTAT 46398 |||||||||| |||||||||| |||||||||| ||| CCGATCGTGG TTTCCGGTTA CAGATGAATT GAG....... .......... .......... 453 GTTTGTTTTT ATAAAGATAG AATTGAGGTG AAGGGGTTTG TAGAAGGTTG ATGGTTTATG 46338 .......... .......... .......... .......... .......... .......... 453 TATAATATAA GCAAGTCAAT TTATGATAAA GCATGAATAA AGAGGATTCA TACAGGTAAT 46278 .......... .......... .......... .......... .......... .......... 453 TAATTTGGAA TTGAGTCATA CATCATGTTT ATTAATTTTG CAATCACGGG TGTGTGGAGG 46218 .......... .......... .......... .......... .......... .......... 453 TATGGGGATC TAATATATGG GAGGAAAAAA CCGAATTGAA CGAATGAAGG TGTGGCCTAG 46158 .......... .......... .......... .......... .......... .......... 453 TGCTCAATAA AGTGGATTGA GTTCTTAGGT TCAAAACACT AGTGATTTCT TCCCCGTGTT 46098 .......... .......... .......... .......... .......... .......... 453 TTAGCCTTGT GCGCACAAGC TGGTCTGGAC GCAAGGGTTA TCAAAATAAG ACTTTGATTT 46038 .......... .......... .......... .......... .......... .......... 453 TGATACTAAC TTGGCAAAGA ATTGTTCCTT CGTCGTGTTT TGGGGGAATG GGGTGAATTG 45978 .......... .......... .......... .......... .......... .......... 453 GGATATGGTT ATTTCAGCAT TGAAGTATGG AAAATATAAC TGCATGGGTT CATCACCCCT 45918 .......... .......... .......... .......... .......... .......... 453 TGCTGACTTT CATTTACCTC AAGTACAGAA GGCAGTTAAG CATACCCAAT GAAACTATTT 45858 .......... .......... .......... .......... .......... .......... 453 TTCATTTCTA TGTTAGCTTT ACCCCATGTG ATTTATTTGA CTTGATTTTA TTAACAGATA 45798 .......... .......... .......... .......... .......... .......... 453 TACTAGGGAT GCTCATTTTC AGTTTTTTCT GATAAATTAC TCTCCTTTAA CAAGAAAATT 45738 .......... .......... .......... .......... .......... .......... 453 GCAAGTATTT GAAGTGATAA TTTGTACATG AGTATCTTAT TTTGTTTGTG CATGGTCGTT 45678 .......... .......... .......... .......... .......... .......... 453 TTATATTGCA TATGAGAACA AATAGACATG AATTTGATTG GCAAGTTAAG AGCATTAATA 45618 .......... .......... .......... .......... .......... .......... 453 TTGAGTTTTT AAAATTATTC TACTTTGCTA GGACATGAAA TGCAAGCCAG AATCTACCAG 45558 .......... .......... .......... .......... .......... .......... 453 TGATCAAATG TGTTTTACTG CTTTCATCAG GAAAAAGGCT TAGGTTGAAT TTCCTAGACT 45498 .......... .......... .......... .......... .......... .......... 453 TGGCTTCACG TTTTAGACAA TTCCTCCTTA AATCCTTTAA GGTAGAGTGC TATCTTAGAA 45438 .......... .......... .......... .......... .......... .......... 453 GGCGAGTGAT TTCCATTTGA ATAGATCGAT CAATATTAGA CTTATAAGAG AAAACTAAAA 45378 .......... .......... .......... .......... .......... .......... 453 ACTGTGCATC ACTATTGCTC CTGATCATAG TAATCCTAAG CTTGTTATAG AACATTAGGA 45318 .......... .......... .......... .......... .......... .......... 453 ATACCCTTTC TCTTTTTATT GCTAAGGCTG AGTCTGATAA TTTGACAAAA TTCACTCACT 45258 .......... .......... .......... .......... .......... .......... 453 TTGTTGGGGT ATTAAGGAGC AGTAGTGCTG CAAGTTCTGA TATTTATGTT TGCTAATCTA 45198 .......... .......... .......... .......... .......... .......... 453 CTATAAATTG ACCATCTCTC TTTTAATGTT TTAGTGTTTT TCTTTAATTG TTTCTTAATG 45138 .......... .......... .......... .......... .......... .......... 453 GACGGATTTT TCGTTTCAGG GGCATAATTA TCATCATCCA TGGACTGAAT GAGCACA 45081 | |||||||||| |||||||||| |||||||||| ||||||| .......... .........G GGCATAATTA TCATCATCCA TGGACTGAAT GAGCACA 491 hqPGS_C08HBa0294K15.1-_SGN-E202493+ (46877 46425,45118 45081) ******************************************************************************** EST sequence 96 +strand 412 n (File: SGN-E277658+) 1 CAATTTTCAC ATAATTTTTT TTTCTTCATT TGATGGAATC TTCGTTGCCG GTGGAGGAGC 61 TTACTTCCGG CGCAAGTGGT CGGATAATTC CTCTTTTCAA AAATCTTCAC CGGTCAGTTT 121 TCTCATACCA AACTTACCGG AGACTAATTA TATTTATACA GTCTATTTTC CTATGGGTAA 181 TTCTTCTGTC TCGACGGAGG TTCTCCACGT CACCTTCGTC TCCTCCGCCT TCGCCATCTG 241 CAGCTACTAC GGCGGTGTTG GGGAAGAGGA GGAAATTTGC TTTGCGGAGG GATGAAGAGG 301 ATACGCAGAG AAGGAGGGCT CTTGCTGAGG CGTTAGATAT GACGGTTGAG AATGACGGTG 361 TGAGCTGCCG TTGGAATACG TCTTTTGTCT TTGGGGCTCG TCGGAATGCT TT Predicted gene structure (within gDNA segment 47475 to 45854): Exon 1 46875 46464 ( 412 n); cDNA 1 412 ( 412 n); score: 0.995 MATCH C08HBa0294K15.1- SGN-E277658+ 0.995 412 1.000 C PGS_C08HBa0294K15.1-_SGN-E277658+ (46875 46464) Alignment (genomic DNA sequence = upper lines): CAATTTTCAC ATAATTTTTT TTTCTTCATT TGATGGAATC TTCGTTGCCG GTGGAGGAGC 46816 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAATTTTCAC ATAATTTTTT TTTCTTCATT TGATGGAATC TTCGTTGCCG GTGGAGGAGC 60 TTACTTCCGG CGCAAGTGGT CGGATAATTC CTCTTTTCAA AAATCTTCAC CGGTCAGTTT 46756 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTACTTCCGG CGCAAGTGGT CGGATAATTC CTCTTTTCAA AAATCTTCAC CGGTCAGTTT 120 TCTCATACCA AACTTACCGG AGACTAATTA TATTTATACA GTCTATTTTC CTATGGGTAA 46696 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTCATACCA AACTTACCGG AGACTAATTA TATTTATACA GTCTATTTTC CTATGGGTAA 180 TTCTTCTGTC TCGACGGAGG TTCTCCACGT CACCTTCGTC TCCTCCGCCT TCGCCATCTG 46636 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTCTGTC TCGACGGAGG TTCTCCACGT CACCTTCGTC TCCTCCGCCT TCGCCATCTG 240 CAGCTACTAC GGCGGTGTTG GGGAAGAGGA GGAAATTTGC TTTGCGGAGG GATGAAGAGG 46576 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGCTACTAC GGCGGTGTTG GGGAAGAGGA GGAAATTTGC TTTGCGGAGG GATGAAGAGG 300 ATACGCAGAG AAGGAGGGCT CTTGCTGAGG CGTTAGATAT GACGGTTGAG AATGACGGTG 46516 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATACGCAGAG AAGGAGGGCT CTTGCTGAGG CGTTAGATAT GACGGTTGAG AATGACGGTG 360 TGAGCTGCCG TTGGAATACG TCTTTGTTCT TTGGGGCTCG TCGGAATGCT TT 46464 |||||||||| |||||||||| ||||| ||| |||||||||| |||||||||| || TGAGCTGCCG TTGGAATACG TCTTTTGTCT TTGGGGCTCG TCGGAATGCT TT 412 hqPGS_C08HBa0294K15.1-_SGN-E277658+ (46875 46464) ******************************************************************************** EST sequence 95 +strand 294 n (File: SGN-E260416+) 1 AAAAACCCCA TTCACAAAAG CTTCATTCTT CAATTTTCAC ATAATTTTTT TTTTCTTCAT 61 TTGATGGAAT CTTCGTTGCC GGTGGAGGAG CTTACTTCCG GCGCAAGTGG TCGGATAATT 121 CCTCTTTTCA AAAATCTTCA CCGGTCAGTT TTCTCATACC AAACTTACCG GAGACTAATT 181 ATATTTATAC AGTCTATTTT CCTATGGGTA ATTCTTCTGT CTCGACGGAG GTTCTCCACG 241 TCACCTTCGT CTCCTCCGCC TTCGCCATCT GCAGCTACTA CGGCGGTGTT GGGG Predicted gene structure (within gDNA segment 47505 to 46003): Exon 1 46905 46613 ( 293 n); cDNA 1 294 ( 294 n); score: 0.991 MATCH C08HBa0294K15.1- SGN-E260416+ 0.991 293 0.997 C PGS_C08HBa0294K15.1-_SGN-E260416+ (46905 46613) Alignment (genomic DNA sequence = upper lines): AAAAACCCCA TTCACAAAAG CTTCATTCTT CAATTTTCAC ATAA-TTTTT TTTTCTTCAT 46847 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| AAAAACCCCA TTCACAAAAG CTTCATTCTT CAATTTTCAC ATAATTTTTT TTTTCTTCAT 60 TTGATGGAAT CTTCGTTGCC GGTGGAGGAG CTTACTTCCG GCGCAAGTGG TCGGATAATT 46787 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATGGAAT CTTCGTTGCC GGTGGAGGAG CTTACTTCCG GCGCAAGTGG TCGGATAATT 120 CCTCTTTTCA AAAATCTTCA CCGGTCAGTT TTCTCATACC AAACTTACCG GAGACTAATT 46727 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCTTTTCA AAAATCTTCA CCGGTCAGTT TTCTCATACC AAACTTACCG GAGACTAATT 180 ATATTTATAC AGTCTATTTT CCTATGGGTA ATTCTTCTGT CTCGACGGAG GTTCTCCACG 46667 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATTTATAC AGTCTATTTT CCTATGGGTA ATTCTTCTGT CTCGACGGAG GTTCTCCACG 240 TCACCTTCGT CTCCTCCGCC TTCGCCATCT GCAGCTACTA CGGCGGTGTT GGGG 46613 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| TCACCTTCGT CTCCTCCGCC TTCGCCATCT GCAGCTACTA CGGCGGTGTT GGGG 294 hqPGS_C08HBa0294K15.1-_SGN-E260416+ (46905 46613) ******************************************************************************** EST sequence 51 -strand 620 n (File: SGN-E238551-) 1 CTATTATTTC CCAAAATCTG GAAGTTATCA TCACAAGAAC ATCTACTTCG AATTACTAAA 61 TCTAAGAGTA TCTAAGAAGC TAAAATACAT AAACAGCTAG TCCATGCCGG AACTTCAAGG 121 CATCAAGACA TGAAGAAGAA GATCCAGTCC AAGCTAGAAG CTTTGTTTTA TCGAAAAAAG 181 GTGATTTTTC GAAAAGAGTT TGTTTTATTT TAAAGTATTT TTCGACTTTA GGAGTCGCCA 241 CTTAATTTTT AAGAAAAATC AAGAAAACTC ATTCTCAAAA CAATTTAAAC AGAAAAGTCG 301 TTTTGAAAAT ATTTTTTAGG ATTCGGGATT CTTATTAGCG TCTTAGGAAG GTGTTTAAGG 361 CACCTAAGAC ACTCCGTTAA ATACGGTTTT CCAACGACTA ACTTATTTGA TTATTTTTAT 421 TTTTACCCTT TGCAAATTTA TTTGAACTTT TATCACGATT TACTTAGCCA AACTTTGCAA 481 ATTTGAGATA TTAATCTTTT AAGATTCCGT CTTAGTTAAA CTTTCTAAGC CTTAACTCTC 541 TAAGCAGACT TTCAAATTTT AAACCTCTAT CGTTTCAAAA CTTCAATTTT TATTTTTTAG 601 TTTCATAAAG CAAAAGGCGT Predicted gene structure (within gDNA segment 58242 to 50934): Exon 1 57552 57365 ( 188 n); cDNA 2 186 ( 185 n); score: 0.801 Intron 1 57364 57091 ( 274 n); Pd: 0.000 (s: 0.60), Pa: 0.000 (s: 0) Exon 2 57090 57064 ( 27 n); cDNA 187 213 ( 27 n); score: 0.704 Intron 2 57063 55520 (1544 n); Pd: 0.089 (s: 0), Pa: 0.000 (s: 0.58) Exon 3 55519 55477 ( 43 n); cDNA 214 255 ( 42 n); score: 0.581 Intron 3 55476 53842 (1635 n); Pd: 0.190 (s: 0.58), Pa: 0.000 (s: 0) Exon 4 53841 53804 ( 38 n); cDNA 256 294 ( 39 n); score: 0.592 Intron 4 53803 52244 (1560 n); Pd: 0.909 (s: 0), Pa: 0.000 (s: 0) Exon 5 52243 52223 ( 21 n); cDNA 295 314 ( 20 n); score: 0.762 Intron 5 52222 51879 ( 344 n); Pd: 0.900 (s: 0), Pa: 0.382 (s: 0) Exon 6 51878 51855 ( 24 n); cDNA 315 336 ( 22 n); score: 0.750 MATCH C08HBa0294K15.1- SGN-E238551- 0.801 341 0.550 C PGS_C08HBa0294K15.1-_SGN-E238551- (57552 57365,57090 57064,55519 55477,53841 53804,52243 52223,51878 51855) Alignment (genomic DNA sequence = upper lines): TATCATTATC CCCAAAATCT GGAAGTCATC ATCACAAGAA CATCTATCCT CAAATTACTA 57493 ||| ||| || || ||||||| |||||| ||| |||||||||| |||||| | | | |||||||| TATTATT-TC CC-AAAATCT GGAAGTTATC ATCACAAGAA CATCTA-CTT CGAATTACTA 58 AATCTAAGAG TATCTAAGAA GCTAAAATAA GTAAAAGAGA TAGTCCATGT CCGAACTTCA 57433 |||||||||| |||||||||| ||||||||| |||| || ||||||||| | |||||||| AATCTAAGAG TATCTAAGAA GCTAAAATAC ATAAAC-AGC TAGTCCATGC CGGAACTTCA 117 AGACATCAAG ACGCGAAGGA AAGAATCCAG TCCGAGCTAG GAACAATATC TCACCCTGAA 57373 || ||||||| || |||| | | |||||| ||| |||||| | | | | | | | || AGGCATCAAG ACATGAAGAA GAAGATCCAG TCCAAGCTAG AAGCTTTGTT TTATCGAAAA 177 A-TCTGATTA TGCTGAAGTC TGGCTAGAGT TGCGGTTGAG TCAAAGTCGA TGGCACGTTT 57314 | ||||| AAGGTGATT. .......... .......... .......... .......... .......... 186 GCTGCACTCC ACAAATAACA AGAAAGAAAC ATACAAGTAG GGGTCAGTAC AAGGCACAAG 57254 .......... .......... .......... .......... .......... .......... 186 TACTGAGTAG GTATCATCGG CCAACTCAAA ATAGAAAACA ACATATATCA TATAATAACA 57194 .......... .......... .......... .......... .......... .......... 186 TAAAATCAAC TACAATACTC AACAGACAAC AACAACAAGT ACCATAACCA TTGGCCACAA 57134 .......... .......... .......... .......... .......... .......... 186 CCCAAGCGCA TCTATGAGGA CTCACTCCTC CACACCATAC TCGTTTGGAA AATAGTTTCT 57074 ||| ||| || ||||| | .......... .......... .......... .......... ...TTTCGAA AAGAGTTTGT 203 TTAAACCTGA GTATATAAAC ATGATTCAAG ATTCATTCTT TTACTATCCT GGTGTCGGAA 57014 || | | | TTTATTTTAA .......... .......... .......... .......... .......... 213 CGTGACACTC CGATCCTTTA CTACTATCCT GATGTCGGAA CGTGACACCC GATCCACTAC 56954 .......... .......... .......... .......... .......... .......... 213 TACTATCCTG GTGTCGGAAC GTGACACCCG ATCCATTACT ACTATCCTGG TGTCGGAACG 56894 .......... .......... .......... .......... .......... .......... 213 TGACACCCGA TCCATTACTA CTATCCTGGT GTCGGGACGT GATACCCGAT CCACTATTAC 56834 .......... .......... .......... .......... .......... .......... 213 TATCCTGGTG TCGGAACGTG ACACCCGATC CACAATTACT ATCCTGGTGT CGGAACGTGA 56774 .......... .......... .......... .......... .......... .......... 213 CACCCGATTC ACTACTACTA TCCTGGTGTC GGAACGTGAC ACCTGATCCA CTAACCTCAT 56714 .......... .......... .......... .......... .......... .......... 213 TCTTTTAGTT CATCAAGCCT TCTTTTATAC CAAGGCATCA TCATTAACAC AGAGGGTTTT 56654 .......... .......... .......... .......... .......... .......... 213 AGGTTTAAGC TTCACAACCT CATCTTTCCA ACCCATTACA ATTACATAAT CACATCATGC 56594 .......... .......... .......... .......... .......... .......... 213 AAGCATACAA TTAAGCATAT GTAAGACTTT ACAATACTAC CCAATACATA TCATTCGCTA 56534 .......... .......... .......... .......... .......... .......... 213 TTAAGAGTTT ACTATGAAAT AGCATAAACC ATAACCTACC TCCACCGAAG AATTCGTGAT 56474 .......... .......... .......... .......... .......... .......... 213 CACGCAAGCT ACTCCTCAAG GTCTTTGCTT TCCTCTTCAT TCTCTCTTCT CTCGCTCGTT 56414 .......... .......... .......... .......... .......... .......... 213 CGTCCCTCTC TTTTGTTCTT TCTATTTTTC CTTATTCAAA CTCTTTTTCT TTTACCCTAA 56354 .......... .......... .......... .......... .......... .......... 213 TTACCATATA ATTAAGTATA AAAGATGGTA AAAGTAACCC ACTATTTATT TCAAGGTTAT 56294 .......... .......... .......... .......... .......... .......... 213 CACCTTTAAC CCCCAAGTAA TTGAATTATT AACATTAACC CACTAACTTT ATAATTATAA 56234 .......... .......... .......... .......... .......... .......... 213 GCAGAAATAG TCCAAAACGC CCCTTAAAAC ATTTAACAGA AATCTGACCC AGTCAAGGTT 56174 .......... .......... .......... .......... .......... .......... 213 ACGCAGCCTG TGACGGCCCG TCGTGCCTAT GACGGTCCGT CCTGCTGCTT CCGTCACAAA 56114 .......... .......... .......... .......... .......... .......... 213 GTTCAGAGAC TGAATTTCAT TAAAGGGTCT GTGACGGTCC GTCGTGCCCA CGACGGTCCG 56054 .......... .......... .......... .......... .......... .......... 213 TCCTGCCATG TCGTCGCGAA GTTCAGAGAG TTGTTCTCAT TACCCAAATT TTTAGAATCT 55994 .......... .......... .......... .......... .......... .......... 213 AAGTGTTTTG GAACGAGACC CCCTCGACGG TCCGTCGTGC CCACGACGGT CCGTCGTGCC 55934 .......... .......... .......... .......... .......... .......... 213 CACGACGGTC CGGGATCCGT CGACCCAGAC AGCTATTACC AGAATAAACT CTACTGCTCA 55874 .......... .......... .......... .......... .......... .......... 213 AAACGACTAA CAGGTCGTTA CACCTACTTT TATTTTTGGT TGTCTGGTTA TTCAACAATG 55814 .......... .......... .......... .......... .......... .......... 213 TAAAAGTGTT TGCGTTTGAC CAAGATGTAA CATGTGAACT TAAGTGCACG GTTTATTTGG 55754 .......... .......... .......... .......... .......... .......... 213 TTTGTCACCT TGTTTCTAAG TGATTTTCAA TGTTTTTTCT TTTGTGTCAA ATCTTAACGG 55694 .......... .......... .......... .......... .......... .......... 213 TTAAATTGAT AATCGAACCG ATAACGATTA AAAGCTGATA AATCAATAAC CGATAATTCA 55634 .......... .......... .......... .......... .......... .......... 213 ATATCTTAAT GGTTTTATAA CGGTTTAGCA TCTCCACAAA CCGATAACCA ATAAGACAAC 55574 .......... .......... .......... .......... .......... .......... 213 CCGATAAACT TCAAAATCGA ATCGAACCGA CCGATACACA GCCCTACACG TCGATATATT 55514 |||| .......... .......... .......... .......... .......... ....AGTATT 219 GCATGACATA AGAAACTGGT CACGAACTTT TATAGAAGTA TGAGACTCTT AATAAAAAGT 55454 ||| | || | | | ||| | ||| | |||| TTTCGACTTT AG-GAGTCGC CACTTAATTT TTAAGAA... .......... .......... 255 TGAAATAAGT GTTGAAAACA CTTCTAAACT TGATGAAAAA TTAAAAGTAT ATTATATTCG 55394 .......... .......... .......... .......... .......... .......... 255 GGTTGCAAGA TTAGGGGTGT GTTGAAGTTT AGTCAATCAA GTAAATTAAA GGTTCTTTTT 55334 .......... .......... .......... .......... .......... .......... 255 TTTAAAAATT GTTAATAATT CAAAAAGTAA AACTAATGAT TTACATATAA TTTAGAAGTG 55274 .......... .......... .......... .......... .......... .......... 255 TTTCCAATAC TTCCCTCGTT TAAAGATACA TGGGAAGATT TTTCAAAATG TTGAATGATT 55214 .......... .......... .......... .......... .......... .......... 255 TACATGGAAA TTAATAAGTG TTCAGCATTC GGTCATTTTG CATTTTTCTC TGTACAAATT 55154 .......... .......... .......... .......... .......... .......... 255 CAGACTGCTT CACACATCAT ACATGTGAAA AACTAGTTCT CGCTCATTTT TTTTATGTTT 55094 .......... .......... .......... .......... .......... .......... 255 AATTATTTTT AACGACAATT CAGTAACAGT GACAGTTAAA AATTTCATAA GAATGTTTAA 55034 .......... .......... .......... .......... .......... .......... 255 GAATTATATA GGTAAAAAAC AATTAACGAA TGAATACATT AAAAAATTGT AAATTATACA 54974 .......... .......... .......... .......... .......... .......... 255 AAGTAATATA AATAATTATT ATTTTTAATT AAAAATAGGG ATAAGATATG AATATCCCTA 54914 .......... .......... .......... .......... .......... .......... 255 AATTATGACC GAAATTTCAG ATATATACAG TAACTAAATT AAAATCTTAT TATCTATGAA 54854 .......... .......... .......... .......... .......... .......... 255 TCCATTTTTT TTTTGTAATT TTATACATTT ATTTATTAAC GTATTCAAAA ATTTAGTTAA 54794 .......... .......... .......... .......... .......... .......... 255 GTTTTACTTT ATACAAAAAT TATACATATC TATAGGAAGA TTTATCAAAT ATATGTAATA 54734 .......... .......... .......... .......... .......... .......... 255 TGTGGCCCCG AATATGTATT TTTGCTTGTA CCCAAACTTT TATTCTTCAA TTTACGTAAA 54674 .......... .......... .......... .......... .......... .......... 255 TAAATAAAAT TTTGAATTAT ACGTGGACAC ATACATTAAT GTATATGCTA CGTTTAGAAA 54614 .......... .......... .......... .......... .......... .......... 255 AATATATTTG GTAGGTCGTT ATTTTTCACA TAAAAGACAT TCTGTTTATA ATTTTTATTT 54554 .......... .......... .......... .......... .......... .......... 255 TTTTTAATAT CATCTTTATT ATCCGATAAC AGTAAGATGG CTTATTAATA GATATATTTA 54494 .......... .......... .......... .......... .......... .......... 255 TAGACTATAT CACAACAATT ATCTAATAGA TGTCCTGATG GTATAAATAC ACCTAAAACA 54434 .......... .......... .......... .......... .......... .......... 255 TAAAGTCACG CTTCTGAGCC TACACTTAGA TGAGACGGAC ACTCGAGAAT CATTATTGGC 54374 .......... .......... .......... .......... .......... .......... 255 CTCAAACGAA TTCTTGGTCT GACTTATTTA CTCAACGAAA GACTTAAAAC ATAAAGAAAA 54314 .......... .......... .......... .......... .......... .......... 255 ATATTCAAAT GCTAAATATC TCAACTATCT CGAACTTAAT GCATGATGTT TTAACATTAA 54254 .......... .......... .......... .......... .......... .......... 255 ACATTTAACT TAGCTAAAAT GACAACTCAA GTATGAACAT AATTAAATAA CAAAAAGATA 54194 .......... .......... .......... .......... .......... .......... 255 ATAAATGGAC TAACATCTGA CTGCAAACTA TGAAGCCTCT AAAACAATTG AGATGGATGT 54134 .......... .......... .......... .......... .......... .......... 255 TAGGGACAAA CCCGATGACA TCCTAATGAA CTAGTAAAAT CACTGAAAGC AATAAATTAA 54074 .......... .......... .......... .......... .......... .......... 255 AAGAGTCCTC TGGAATACAA GGAAGTTCAC TAACTGACTC TAGAGTGCTC ACTGGATCAA 54014 .......... .......... .......... .......... .......... .......... 255 CGGTGTGCTG CGTGCTGATT ATGATTACCT GTGTTTGCAT CATAATATGA TGCAGGCCAA 53954 .......... .......... .......... .......... .......... .......... 255 CTAATATCAA TAAATTGAAT ACAAGAGTAT GCGAGTTGAA ATACTAAAAC AAGACATAAG 53894 .......... .......... .......... .......... .......... .......... 255 CTTGGAAAGA GTCCGAAAGA AACACTTACC TAGCCTTTAC TTAAGTAAAC TGAACTCAAC 53834 || |||| .......... .......... .......... .......... .......... ..AAATCAAG 263 TAATTTCAAT -AGAAAGCAA TGTAAATAAA TGCAATACAA AGAAAAGCTT TAAAACATGA 53775 || ||| | ||| ||| | |||| | | AAAACTCATT CTCAAAACAA TTTAAACAGA A......... .......... .......... 294 ACTTTAATTC TGTTTATTTA GAAACACAAT GATAATGGCG TATATATGCA AAGATACAAT 53715 .......... .......... .......... .......... .......... .......... 294 ATGAACTCTA TTTGTATATA AAAATATAAT TATATCTGAC GTATATAAAA ATACAAAATA 53655 .......... .......... .......... .......... .......... .......... 294 CTATTGTGGG TAAGGTTGGA CAACGGACCG GGTTGTACCG ATACCGGTCC GATTCGGTTG 53595 .......... .......... .......... .......... .......... .......... 294 CCTACGGAAT GGAATAAGAC ATCGTGAATC GATATGAGGA ACGGAATGGA ACCGCAATTT 53535 .......... .......... .......... .......... .......... .......... 294 GGTACCGCTG TACGGTACCG ATTTATCCCA ATTTATTTCG ATTCTGATCC GATTCCAATT 53475 .......... .......... .......... .......... .......... .......... 294 AATTATTATT TATTAATTAA CGTTTACATC CCTACAAATC CGTCCAACCT TTTTTTACCT 53415 .......... .......... .......... .......... .......... .......... 294 CATAAAGCCC TAAATAGAAA AAAAATAATT ATATGTAATA GGCTCAAATT TTGTGGGCTT 53355 .......... .......... .......... .......... .......... .......... 294 GGAATTGTGG CCTTAAATTA TCTATCAACT GTGTATGTAA AACTCACTCG TATTTAAATA 53295 .......... .......... .......... .......... .......... .......... 294 ATTTTCTAGA CTGTGCTAGA AATATAAAAT AAATGTTAAT AAATGTAACA AATAAAATGA 53235 .......... .......... .......... .......... .......... .......... 294 TTATAAAAAA ATAAATGTAA TAAATATACT AATGACGTGA ATTTAACAAA ATAACAACCT 53175 .......... .......... .......... .......... .......... .......... 294 AATAAAAAAT GATAAAATAT TTGAACATAT TTAACCGGTT GTGACGAAAA TAAGGTAATT 53115 .......... .......... .......... .......... .......... .......... 294 TAAATTTATC AGAAGAAAAT ATTCTAAAAC TTGACAAATG AGGAGAGTTA TCGATAAACT 53055 .......... .......... .......... .......... .......... .......... 294 TATTTATTTA AAATTATAAA AAAAATCATT TTGAACTATT AAATAAATAT AACTTTAAAA 52995 .......... .......... .......... .......... .......... .......... 294 GTTACAAATT TTGAAATGTT ATAAACTTAA GTAAAAAATT AAATTATAAA TTTAAAAACT 52935 .......... .......... .......... .......... .......... .......... 294 ATTAATTTAA ACTTAGAAAA AATAAAAAAA ATCATAATTT CGTAATTTTA AAAAATATTT 52875 .......... .......... .......... .......... .......... .......... 294 TTTGAAATAA CTAAATGTGT CGTCCCGTTT ATCCCATCCA GTTTCATTCC TGTTTCATCC 52815 .......... .......... .......... .......... .......... .......... 294 CGGTATATAG TGGGACTAGA CGAAATCAAG TATTCGTCTT GATAATTCCG GTCCGGTTCA 52755 .......... .......... .......... .......... .......... .......... 294 TTTCGGTGTC GGTCAACGAA CCGGTCAACT CGTTCCGTTT CGGTATAGTA CCGATTCGTG 52695 .......... .......... .......... .......... .......... .......... 294 CCGGTCCAGT GGTTCCATTC TGATCCGTTG CTAGTCTTAA TTGTGGGAGT TTCTTTAACC 52635 .......... .......... .......... .......... .......... .......... 294 GACAATCATC ACTTAAGAGT TATATTGATG ATACAGTGTC TCGCTCATGC TTCCAAAATT 52575 .......... .......... .......... .......... .......... .......... 294 GTCATATACT TTGTCGTCAT ATAAGACGTC TTTACTAAGT GGATCCACTA GTCTATGCTA 52515 .......... .......... .......... .......... .......... .......... 294 AAAAACAATA AGAAATCATC TAAAAAGTAT GGTCCTTTCT ATCCATAATG GCTACATGGT 52455 .......... .......... .......... .......... .......... .......... 294 TTTAGGGGGT TGTGAGTTAT ATGAACTCTC CTTCATATCG GTGTTCAATA CTACTCCCAA 52395 .......... .......... .......... .......... .......... .......... 294 AATATACTAG CTCTTTATGC TTAGAAGCAT AACTTCTTTC TATGGTTTGA GATAATTGCT 52335 .......... .......... .......... .......... .......... .......... 294 CAAAGACTTA GCTTAGATGT TATCTTGAAA ATCTTAGTTT CCTCTCTAGC TTAATTGTAA 52275 .......... .......... .......... .......... .......... .......... 294 AGCATTTACT CTTTAACTGA AAACTAGCTC AAAGGCTCTT TTGAAAATCT TAATTTCCTT 52215 ||| | || |||||||| | | .......... .......... .......... .AAGTC-GTT TTGAAAATAT TT........ 314 TCTTATTGAA ATGTGAAAAC ATTTATTCTT TATTGAAAAA CTAGCTCAAA GGCACTTTTG 52155 .......... .......... .......... .......... .......... .......... 314 AAAATCTCAT TTCTTTTCTT GTTTAAATAT GAAAACATTT ACTCTTTTGG AATACATAAT 52095 .......... .......... .......... .......... .......... .......... 314 CTCCATATAC TTTTGAAGAA ATGAACTTCA ATTTTACTGT TTATTGAACT CAAAACTCAA 52035 .......... .......... .......... .......... .......... .......... 314 GTCATAAAAC AAAGTTAAAA CATTTGTAAA AGACTTCTAA AAACTTTATG AACTGCTCTT 51975 .......... .......... .......... .......... .......... .......... 314 GACTTGACAC TTAACTTCTC TTGACTTGGC TTGTAACTTC TCTTGACTAG ACTCTTAATT 51915 .......... .......... .......... .......... .......... .......... 314 TTTCTTGACT TGAATCTTAA CTCACCTTGA ATTTAGTTTA TGGATTCAAG GATCATGATT 51855 |||| |||||| | ||| | ||| .......... .......... .......... ......TTTA -GGATTC-GG GATTCTTATT 336 hqPGS_C08HBa0294K15.1-_SGN-E238551- (57552 57365,57090 57064,55519 55477,53841 53804,52243 52223,51878 51855) ******************************************************************************** EST sequence 6 -strand 643 n (File: SGN-E211987-) 1 CAAAATAAAC CAAAAAAAAG TNCTATTAAG TAAGGCTGTT TAAAATCGAA TCAAAATCGA 61 TAAGTTGAAT CGATAAAAAA GTTATTGGTT TATAGTATTG GGTTATTGGT TTAGTGATTT 121 TGATAATGGT TTTGATTTTT TTTTGTTATC GGGTTATCGA TTCTTAACGG TTTAAAGTTT 181 TTTTTTTTAA CGGATTAACC GATAACCCGA TAGTAAATTA AATATTTATA TTTATACCAT 241 TTTTGTATAT AAAGTTCTCG ACTTAGAGTT TAATTTCCTA CTTTTATTTT TGATTGTCTC 301 AAATACTTGA TTATTCTACG ATGTAAAAGT GTTTGCTTTT GAGCAAGATG TAACTTGTGA 361 ACTCAAGTGC ATGGTTTATT TGGTTTGTCA CTTTGTTTCT AAGTGATTTT CAATATTTTT 421 TCTTTTCGAT CAAATCTTAA CGGTTAAACC GATAACCGAA TCGATAACGA TCAAAAACCG 481 ATAAACCAAT AATCGATAAG CCAATATCTT AATGGTTCTA TAATGGTTTA GCATCACTAC 541 AAATCGATAA CTAATAAGCC AACCCAATAA ACTTTAAAGT CGAACCGAAT CAACCGATCG 601 ATACACAGCC CTACTATCAA GTGCTTGAAA TACTGGAATT ATG Predicted gene structure (within gDNA segment 60094 to 53139): Exon 1 55829 55541 ( 289 n); cDNA 308 596 ( 289 n); score: 0.872 MATCH C08HBa0294K15.1- SGN-E211987- 0.872 289 0.449 C PGS_C08HBa0294K15.1-_SGN-E211987- (55829 55541) Alignment (genomic DNA sequence = upper lines): TGGTTATTCA ACAATGTAAA AGTGTTTGCG TTTGACCAAG ATGTAACATG TGAACTTAAG 55770 || |||||| || ||||||| ||||||||| ||||| |||| ||||||| || |||||| ||| TGATTATTCT ACGATGTAAA AGTGTTTGCT TTTGAGCAAG ATGTAACTTG TGAACTCAAG 367 TGCACGGTTT ATTTGGTTTG TCACCTTGTT TCTAAGTGAT TTTCAATGTT TTTTCTTTTG 55710 |||| ||||| |||||||||| |||| ||||| |||||||||| ||||||| || ||||||||| TGCATGGTTT ATTTGGTTTG TCACTTTGTT TCTAAGTGAT TTTCAATATT TTTTCTTTTC 427 TGTCAAATCT TAACGGTTAA ATTGATAATC GAACCGATAA CGATTAAAAG CTGATAAATC 55650 |||||||| |||||||||| | ||||| | ||| |||||| |||| |||| | |||||| | GATCAAATCT TAACGGTTAA ACCGATAACC GAATCGATAA CGATCAAAAA CCGATAAACC 487 AATAACCGAT AATTCAATAT CTTAATGGTT TTATAACGGT TTAGCATCTC CACAAACCGA 55590 ||||| |||| || |||||| |||||||||| ||||| ||| |||||||| | ||||| ||| AATAATCGAT AAGCCAATAT CTTAATGGTT CTATAATGGT TTAGCATCAC TACAAATCGA 547 TAACCAATAA GACAACCCGA TAAACTTCAA AATCGAATCG AACCGACCG 55541 |||| ||||| | |||||| | ||||||| || | ||||| || || | |||| TAACTAATAA GCCAACCCAA TAAACTTTAA AGTCGAACCG AATCAACCG 596 hqPGS_C08HBa0294K15.1-_SGN-E211987- (55829 55541) ******************************************************************************** EST sequence 31 -strand 515 n (File: SGN-E242359-) 1 AGTATGTATT AAGCAATATC ATAAAATTAA CTAATATCCT TAGCATGCAG CATTTGCAAT 61 TACCATAACC CTTGGTTGCA TCACCAAGCA CATCAATGAG GACTCACACC TCCTCATCAT 121 ACTTATTTGG GAATTTAGTT CATTGGATTG CATATATTAA CATATTTCAA GATTCATCAT 181 ATTTATTCCC CTCGTGTCCT TACGTGACAC TCCACTCCTC AATATACTAT CCTGGCACCG 241 GAACGTGGCA CCCGATCCAT ATTCTATCCT GGTGTCAGAA CGTGACACCC GATCCATATT 301 CTATCCTGGT GTCGGAACGT GACACCCGAT CCATATTCTA TCCTGGTACC GGAACGTGGC 361 ACCCGATCCA TATTCTATCC TGGTGTCGGA ACGTGACACC CGATCCATAT TCTATCCTGG 421 TACCGGAACG TGGCACCCGA TCCCCTAATC TCACCACTTT CGTTCATCAA GCCTTCTTTT 481 ATACCAAGGC ATCATTATTA ACAAAGTAGA TTAGG Predicted gene structure (within gDNA segment 60175 to 55873): Exon 1 57211 56997 ( 215 n); cDNA 4 219 ( 216 n); score: 0.707 Intron 1 56996 56960 ( 37 n); Pd: 0.000 (s: 0.72), Pa: 0.000 (s: 0.82) Exon 2 56959 56662 ( 298 n); cDNA 220 506 ( 287 n); score: 0.866 MATCH C08HBa0294K15.1- SGN-E242359- 0.799 513 0.996 C PGS_C08HBa0294K15.1-_SGN-E242359- (57211 56997,56959 56662) Alignment (genomic DNA sequence = upper lines): ATATATCATA TAATAACATA AAATCAACTA CAATACTCAA CAGACAACAA CAACAAGTAC 57152 || ||| | |||| |||| |||| ||||| || || | || || || ||| ||| ATGTATTAAG CAATATCATA AAATTAACTA ATATCCTTAG CATGCAGCAT TTGCAATTAC 63 CATAACCATT GGCCACAAC- CCAAGCGCAT CTATGAGGAC TCACTCCTCC ACACCATACT 57093 ||||||| || || || | |||||| ||| | |||||||| |||| ||||| || |||||| CATAACCCTT GGTTGCATCA CCAAGCACAT CAATGAGGAC TCACACCTCC TCATCATACT 123 CGTTTGGAAA ATAGTTTCTT TAAACCTGAG TATATAAACA TGATTCAAGA TTCATTCT-T 57034 ||||| || | ||| | | | || ||||| |||| | ||||||| ||||| | | TATTTGGGAA TTTAGTTCAT TGGA-TTGCA TATATTAACA TATTTCAAGA TTCATCATAT 182 TTACTATCCT GGTGTCGGAA CGTGACACTC CGATCCTTTA CTACTATCCT GATGTCGGAA 56974 ||| | ||| ||||| | |||||||||| | |||| TTATTCCCCT CGTGTCCTTA CGTGACACTC CACTCCT... .......... .......... 219 CGTGACACCC GATCCACTAC TACTATCCTG GTGTCGGAAC GTGACACCCG ATCCATTACT 56914 || || |||||||||| | |||||| ||| |||||| ||||| || | .......... ....CAATA- TACTATCCTG GCACCGGAAC GTGGCACCCG ATCCA-TA-T 262 ACTATCCTGG TGTCGGAACG TGACACCCGA TCCATTACTA CTATCCTGGT GTCGGGACGT 56854 ||||||||| |||| ||||| |||||||||| |||| || | |||||||||| ||||| |||| TCTATCCTGG TGTCAGAACG TGACACCCGA TCCA-TA-TT CTATCCTGGT GTCGGAACGT 320 GATACCCGAT CCACTATTAC TATCCTGGTG TCGGAACGTG ACACCCGATC CACAATTACT 56794 || ||||||| ||| |||| | ||||||||| ||||||||| ||||||||| || ||| || GACACCCGAT CCA-TATT-C TATCCTGGTA CCGGAACGTG GCACCCGATC CA-TATT-CT 376 ATCCTGGTGT CGGAACGTGA CACCCGATTC ACTACTACTA TCCTGGTGTC GGAACGTGAC 56734 |||||||||| |||||||||| |||||||| | | || | ||| ||||||| | |||||||| | ATCCTGGTGT CGGAACGTGA CACCCGATCC A-TA-TTCTA TCCTGGTACC GGAACGTGGC 434 ACCTGATCCA CTAACCTCAT TCTTTTAGTT CATCAAGCCT TCTTTTATAC CAAGGCATCA 56674 ||| ||||| |||| |||| ||| ||| |||||||||| |||||||||| |||||||||| ACCCGATCCC CTAATCTCAC CACTTTCGTT CATCAAGCCT TCTTTTATAC CAAGGCATCA 494 TCATTAACAC AG 56662 | ||||||| || TTATTAACAA AG 506 hqPGS_C08HBa0294K15.1-_SGN-E242359- (57211 56997,56959 56662) ******************************************************************************** EST sequence 113 +strand 686 n (File: SGN-E241789+) 1 ATGTCTGATC TTCAAGGACA TCAAGACATG AATGAGAGAG AATCCAGTCC GAGCTAGGAA 61 CAATAGCTCA CCCTGAAATC TGACGTGATG AAGACTGGTT AGAGTTGCGG TTGAGTTGAA 121 GACGACGGTA CGTTTGCTGC ACTCCACAAT TAACAAAAAG AAAACATAAA AGTAGGGGTC 181 AGTACAAACA CGAGTACTGA GTAGATATCA TCGGCCAACT CAGAATAGAG AACAATATAT 241 ATCAAATAAT AAAATAAAAT CAACCATAAC ACTTAACAGG TGACAACAAC AAGTACCATA 301 ACCATTGGGC ACAACCCAAG AACATCTATG AGGACTCAAG CCTCCACACC ATACTCATTT 361 GGGAAACAGG TTCATTAAAT TGAGTACATT AACATAATTC AAGATTCATT CTTTTTACTA 421 TCGTGGTGTC GGAACGTGAT ACTCCGATCC CCTAATGCTA CGTGTCGGTT CGTGACACCC 481 GATCCCCTAA TACTACGTGT CGGTTCGTTA CACCCGATCT CCTAATACTA CGTGCCGATT 541 CGTGACACCC GATCCATTAA TACTATGTGT CGGTTCGTGA CACCCGATCC ATTAATACTA 601 CGTGTCGGTT CGTGACACCC GATCCCCTAA CCTCATTCTT TTAGTTCATC AAGCCTTCTT 661 TTATACCAAG ACATCATCAT TAACAA Predicted gene structure (within gDNA segment 58391 to 55910): Exon 1 57446 56870 ( 577 n); cDNA 1 566 ( 566 n); score: 0.832 Intron 1 56869 56788 ( 82 n); Pd: 0.000 (s: 0.76), Pa: 0.000 (s: 0.78) Exon 2 56787 56665 ( 123 n); cDNA 567 685 ( 119 n); score: 0.886 MATCH C08HBa0294K15.1- SGN-E241789+ 0.841 700 1.020 C PGS_C08HBa0294K15.1-_SGN-E241789+ (57446 56870,56787 56665) Alignment (genomic DNA sequence = upper lines): ATGTCCGAAC TTCAA-GACA TCAAGACGCG AA-G-GAAAG AATCCAGTCC GAGCTAGGAA 57390 ||||| || | ||||| |||| ||||||| | || | || || |||||||||| |||||||||| ATGTCTGATC TTCAAGGACA TCAAGACATG AATGAGAGAG AATCCAGTCC GAGCTAGGAA 60 CAATATCTCA CCCTGAAATC TGATTATGCT GAAGTCTGGC TAGAGTTGCG GTTGAGTCAA 57330 ||||| |||| |||||||||| ||| || | |||| |||| |||||||||| ||||||| | CAATAGCTCA CCCTGAAATC TGA-CGTGAT GAAGACTGGT TAGAGTTGCG GTTGAGTTGA 119 AGTCGATGGC ACGTTTGCTG CACTCCACAA ATAACAAGAA AGAAACATAC AAGTAGGGGT 57270 || ||| || |||||||||| |||||||||| |||||| || ||||||| |||||||||| AGACGACGGT ACGTTTGCTG CACTCCACAA TTAACAAAAA GAAAACATAA AAGTAGGGGT 179 CAGTACAAGG CACAAGTACT GAGTAGGTAT CATCGGCCAA CTCAAAATAG AAAACAACAT 57210 |||||||| ||| |||||| |||||| ||| |||||||||| |||| ||||| | ||||| || CAGTACAA-A CACGAGTACT GAGTAGATAT CATCGGCCAA CTCAGAATAG AGAACAATAT 238 ATATCATATA ATAACATAAA ATCAACTACA ATACTCAACA GACAACAACA ACAAGTACCA 57150 |||||| ||| |||| ||||| |||||| | | | ||| |||| | |||||| |||||||||| ATATCAAATA ATAAAATAAA ATCAACCATA ACACTTAACA GGTGACAACA ACAAGTACCA 298 TAACCATTGG CCACAACCCA AGCGCATCTA TGAGGACTCA CTCCTCCACA CCATACTCGT 57090 |||||||||| ||||||||| || |||||| |||||||||| |||||||| |||||||| | TAACCATTGG GCACAACCCA AGAACATCTA TGAGGACTCA AGCCTCCACA CCATACTCAT 358 TTGGAAAATA GTTTCTTTAA ACCTGAGTAT ATAAACATGA TTCAAGATTC ATTC-TTTTA 57031 |||| ||| | | ||| |||| | |||||| || ||||| | |||||||||| |||| ||||| TTGGGAAACA GGTTCATTAA A-TTGAGTAC ATTAACATAA TTCAAGATTC ATTCTTTTTA 417 CTATCCTGGT GTCGGAACGT GACACTCCGA TCCTTTACTA CTATCCTGAT GTCGGAACGT 56971 ||||| |||| |||||||||| || ||||||| ||| || | ||| | | | ||||| ||| CTATCGTGGT GTCGGAACGT GATACTCCGA TCCCCTAATG CTA--C-G-T GTCGGTTCGT 473 GACACCCGAT CCACTACTAC TATCCTGGTG TCGGAACGTG ACACCCGATC CATTACTACT 56911 |||||||||| || ||| ||| || | ||| |||| ||| |||||||||| || |||| GACACCCGAT CCCCTAATAC TA--C--GTG TCGGTTCGTT ACACCCGATC TCCTAATACT 529 ATCCTGGTGT CGGAACGTGA CACCCGATCC ATTACTACTA TCCTGGTGTC GGGACGTGAT 56851 | | ||| || ||||| |||||||||| |||| ||||| | A--C--GTGC CGATTCGTGA CACCCGATCC ATTAATACTA T......... .......... 566 ACCCGATCCA CTATTACTAT CCTGGTGTCG GAACGTGACA CCCGATCCAC AATTACTATC 56791 .......... .......... .......... .......... .......... .......... 566 CTGGTGTCGG AACGTGACAC CCGATTCACT ACTACTATCC TGGTGTCGGA ACGTGACACC 56731 ||||||| |||||||| ||||| || | | ||||| | ||||||| ||||||||| ...GTGTCGG TTCGTGACAC CCGATCCATT AATACTA--C --GTGTCGGT TCGTGACACC 619 TGATCCACTA ACCTCATTCT TTTAGTTCAT CAAGCCTTCT TTTATACCAA GGCATCATCA 56671 ||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| CGATCCCCTA ACCTCATTCT TTTAGTTCAT CAAGCCTTCT TTTATACCAA GACATCATCA 679 TTAACA 56665 |||||| TTAACA 685 hqPGS_C08HBa0294K15.1-_SGN-E241789+ (57446 56870,56787 56665) ******************************************************************************** EST sequence 70 -strand 660 n (File: SGN-E349296-) 1 AATATTATCA ATACATATTA TTCGCTATTA AGAGCTTACT ACGAATATCG TAAGAGAAAC 61 CATAACCTAC CTCCACCGAA GATTCGTGAT CAAGCAAGTG ATTTCCCAAG CTTTGTGTTT 121 TTTCCTCTCG TTCGATCCTC TTTCTCGTTC GACTTTCTCT CTCTTTCTCT TGTTCTTTCT 181 ATTTTCTTTA TTCAAACCCT CTTTCTTTTA CCCTAATTAG TATATAATTA AGAATAAAAT 241 ATGGCAATAA TAACCCACTA ATTAACTTAA GGTTACCTCT TTTAACCCCC AAGTAATTAG 301 ACTTATTAAC ATTAACCCAC TAACTTTATA ATTAAAGCAG GAATAGTCAA AAACGTCCCT 361 TAAAACAATT GAGGAATTCC GACTCAGACT GGGATTTACG CAGCCTGTGA CAGCCCGTTG 421 TGCCTGCGAC GGTCCGTCCT GCAGGTCGTC GCAAGGTTCA GAGACTGGAT TTTCACTGAA 481 GACTCTGTGA TGGTCCATCA CGCCTGTGAC GGTCCGTCTT GCCATTCCGT TACGAAGTTC 541 AGAGAGTCGA TTTTCAGTAC CCAATTTCAG ATTTCCTAAG TGTTTTGAAA TGAGACCCTG 601 CGACGGTCCG TCGTGCCCAT GATGGTCCGT CGTGGGGTCC GTCATTTCTG CCAGTTTTTC Predicted gene structure (within gDNA segment 58701 to 52377): Exon 1 56561 55937 ( 625 n); cDNA 1 633 ( 633 n); score: 0.760 MATCH C08HBa0294K15.1- SGN-E349296- 0.760 625 0.947 C PGS_C08HBa0294K15.1-_SGN-E349296- (56561 55937) Alignment (genomic DNA sequence = upper lines): AATACTACCC AATACATATC ATTCGCTATT AAGAGTTTAC TATGAA-ATA G-CAT--AAA 56506 |||| || | ||||||||| |||||||||| ||||| |||| || ||| || | | ||| AATATTA-TC AATACATATT ATTCGCTATT AAGAGCTTAC TACGAATATC GTAAGAGAAA 59 CCATAACCTA CCTCCACCGA AGAATTCGTG ATCACGCAAG CTACTCCTCA AGGTCTTTGC 56446 |||||||||| |||||||||| || ||||||| |||| ||||| | | | || || | | || CCATAACCTA CCTCCACCGA AG-ATTCGTG ATCAAGCAAG TGATTTCCCA AGCTTTGTGT 118 TTTCCTCT-T CATTCTCT-C T-TCTCTCGC TCG---TTC- GTCCCTCTCT TTTGTTCTTT 56393 ||| || | | ||| | | | | ||||| ||| ||| || || ||| ||||||||| TTTTTCCTCT CGTTCGATCC TCTTTCTCGT TCGACTTTCT CTCTCTTTCT CTTGTTCTTT 178 CTATTTTTCC TTATTCAAAC TCTTTTTCTT TTACCCTAAT TACCATATAA TTAAGTATAA 56333 ||| ||||| |||||||||| || |||||| |||||||||| || |||||| ||||| |||| CTA-TTTTCT TTATTCAAAC CCTCTTTCTT TTACCCTAAT TAGTATATAA TTAAGAATAA 237 AAGATGGTAA AAGTAACCCA CTATTTATTT CAAGGTTATC ACCTTTAACC CCCAAGTAAT 56273 || |||| || | ||||||| ||| ||| | ||||||| | | ||||||| |||||||||| AATATGGCAA TAATAACCCA CTAATTAACT TAAGGTTACC TCTTTTAACC CCCAAGTAAT 297 T-GAATTATT AACATTAACC CACTAACTTT ATAATTATAA GCAGAAATAG TCCAAAACGC 56214 | || ||||| |||||||||| |||||||||| ||||||| || |||| ||||| || |||||| TAGACTTATT AACATTAACC CACTAACTTT ATAATTA-AA GCAGGAATAG TCAAAAACGT 356 CCCTTAAAAC ATTTAACAGA AATCTGACCC AGTCAAGG-- TTACGCAGCC TGTGACGGCC 56156 |||||||||| | || | || | || ||| | || | || |||||||||| |||||| ||| CCCTTAAAAC AATTGA-GGA ATTCCGACTC AGACTGGGAT TTACGCAGCC TGTGACAGCC 415 CGTCGTGCCT ATGACGGTCC GTCCTGCTGC TTCCGTCACA AAGTTCAGAG ACT-GAATTT 56097 ||| |||||| |||||||| ||||||| | | |||| || | |||||||| ||| || ||| CGTTGTGCCT GCGACGGTCC GTCCTGCAG- GT-CGTCGCA AGGTTCAGAG ACTGGATTTT 473 CATTAAAGGG TCTGTGACGG TCCGTCGTGC CCACGACGGT CCGTCCTGCC ATGTCGTCGC 56037 || | ||| ||||||| || ||| || || | |||||| ||||| |||| || ||| | CACTGAAGAC TCTGTGATGG TCCATCACGC CTGTGACGGT CCGTCTTGCC ATTCCGTTAC 533 GAAGTTCAGA GAGTTG-TTC TCATTACCCA AATTTTTAGA ATCTAAGTGT TTTGGAACGA 55978 |||||||||| |||| | || ||| |||||| | || | |||||||| |||| || || GAAGTTCAGA GAGTCGATTT TCAGTACCCA ATTTCAGATT TCCTAAGTGT TTTGAAATGA 593 GACCCCCTCG ACGGTCCGTC GTGCCCACGA CGGTCCGTCG T 55937 || ||| || |||||||||| ||||||| || ||||||||| | GA-CCCTGCG ACGGTCCGTC GTGCCCATGA TGGTCCGTCG T 633 hqPGS_C08HBa0294K15.1-_SGN-E349296- (56561 55937) ******************************************************************************** EST sequence 27 -strand 390 n (File: SGN-E242274-) 1 AATTAATTCA AGGTTATCTC CTTCAACCCC CCAAGTAATT GAATTATTAA CATTAAACCA 61 CTAATTTCAT AATTATAAGC AGGAATAGTC CAAAACGCCC CTTAAAACAT TTAACAAAAA 121 TCCGACCCAG TCAGGGTTAC GCAGTCTGTG ACGACCAGTC GTGCCTGCGA CGGTCCGTCC 181 TGCTGCTTCC GTCACAAAGT TCAGAGATTA AATTTCACTA AGGGTTTGTG ACAGCCCGTC 241 ATGCCTGTGA CGGTCCGTCG TGCCATTTCG TCGCGAAGTT CAGAGAGTCG ATCTCAGTAC 301 CCAAATTTCA GAATTCTAAG TGTTTTGGAA CGAGACACCC TCCACGGTCC GTCGTGCTCA 361 TGACGGTCCG TCGTGGGATC CGTCGACTCA Predicted gene structure (within gDNA segment 57668 to 53675): Exon 1 56308 55937 ( 372 n); cDNA 3 374 ( 372 n); score: 0.886 MATCH C08HBa0294K15.1- SGN-E242274- 0.886 372 0.954 C PGS_C08HBa0294K15.1-_SGN-E242274- (56308 55937) Alignment (genomic DNA sequence = upper lines): TTATTTCAAG GTTATCACCT TTAACCC-CC AAGTAATTGA ATTATTAACA TTAACCCACT 56250 ||| |||||| |||||| ||| | ||||| || |||||||||| |||||||||| |||| ||||| TTAATTCAAG GTTATCTCCT TCAACCCCCC AAGTAATTGA ATTATTAACA TTAAACCACT 62 AACTTTATAA TTATAAGCAG AAATAGTCCA AAACGCCCCT TAAAACATTT AACAGAAATC 56190 || || |||| |||||||||| ||||||||| |||||||||| |||||||||| |||| ||||| AATTTCATAA TTATAAGCAG GAATAGTCCA AAACGCCCCT TAAAACATTT AACAAAAATC 122 TGACCCAGTC AAGGTTACGC AGCCTGTGAC GGCCCGTCGT GCCTATGACG GTCCGTCCTG 56130 ||||||||| | |||||||| || ||||||| | || ||||| |||| |||| |||||||||| CGACCCAGTC AGGGTTACGC AGTCTGTGAC GACCAGTCGT GCCTGCGACG GTCCGTCCTG 182 CTGCTTCCGT CACAAAGTTC AGAGACTGAA TTTCATTAAA GGGTCTGTGA CGGTCCGTCG 56070 |||||||||| |||||||||| ||||| | || ||||| | || |||| ||||| | | ||||| CTGCTTCCGT CACAAAGTTC AGAGATTAAA TTTCACT-AA GGGTTTGTGA CAGCCCGTCA 241 TGCCCACGAC GGTCCGTCCT GCCATGTCGT CGCGAAGTTC AGAGAGTTGT TCTCATTACC 56010 |||| ||| |||||||| | ||||| |||| |||||||||| ||||||| | ||||| |||| TGCCTGTGAC GGTCCGTCGT GCCATTTCGT CGCGAAGTTC AGAGAGTCGA TCTCAGTACC 301 CAAATTTTTA GAATCTAAGT GTTTTGGAAC GAGACCCCCT CGACGGTCCG TCGTGCCCAC 55950 ||||||| | ||||||| |||||||||| ||||| |||| | |||||||| |||||| || CAAATTTCAG AATTCTAAGT GTTTTGGAAC GAGACACCCT CCACGGTCCG TCGTGCTCAT 361 GACGGTCCGT CGT 55937 |||||||||| ||| GACGGTCCGT CGT 374 hqPGS_C08HBa0294K15.1-_SGN-E242274- (56308 55937) ******************************************************************************** EST sequence 68 -strand 725 n (File: SGN-E546548-) 1 GGTACCGGAA CGTGGCACCC GATCCATATT CTATCCTGGT GTCGGAACGT GACACTCCGA 61 TCCTCATATT CATTCTATCC TGGTACCGGA ACGTGGCACC CGATCCCCTA ATCCATCAAG 121 CCTTCTTTTA CACTAAGGCA TCATCATTCT CATTATATAA TTTATCAAGC CTTCTTTCAT 181 ACTAAGGCAT CATCATTCTC ATTATATAAT ATATCAAGCG AATTAGGGTT CTTTCAAGAT 241 TTGGGATTCA ATTGCTTCAT CATGCTTTGT TAATTCATCG CAATTTCATA ATCATAATCA 301 TGCAAGCATA CAACTTAAGC ACATAGCAGG GTTTACAATA CTATCAACAC ATAATATTCA 361 CTATTAAGAG TTCACTACGA ATATCGTAAC ATAAACCATA ACCTACCTCC ACCGAAGAAT 421 TGAATCAACA AGCTATCTTC TCAAAATCCT TGCTATCCTC TTCGTTTCTC TCTCTCTACT 481 CGTTCGTTTC TCCTCTCTTT CTGTTCTTTT CTTTTGTTTT GTTTTATTCA AACCCTCCTT 541 CTTTTTACCC TAATTAAAAG TATAATTAAG TGTAAAGGAG GACAATAAAA CCCACTAATT 601 AACTTAAGGT TACCTCTTTT AACCCCCAAG TAATTAGACC TATTAATATT AACCCTCAAT 661 CTTTATAATT AAGGAAAGAA TAGTCCAAAA CGACCCCTAA AACGTGTAGA GGAATCCTAT 721 TTTGC Predicted gene structure (within gDNA segment 59140 to 52840): Exon 1 58201 58167 ( 35 n); cDNA 241 274 ( 34 n); score: 0.657 Intron 1 58166 56622 (1545 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.77) Exon 2 56621 56190 ( 432 n); cDNA 275 716 ( 442 n); score: 0.720 MATCH C08HBa0294K15.1- SGN-E546548- 0.720 467 0.644 C PGS_C08HBa0294K15.1-_SGN-E546548- (58201 58167,56621 56190) Alignment (genomic DNA sequence = upper lines): TTGGGGTGGT AATTCCTCAT TCTGCACTTG TTCATCCTCC CCTTCCTCAC CCTCTCTTAC 58142 ||||| | | | | |||| ||| ||| || || TTGGGATTCA ATTGCTTCAT CATGC-TTTG TTAAT..... .......... .......... 274 TACTTCCTCA GTCGGTGGAG GAGTCACCGC CCTAGTACTA GATGGGCCAG GTGCTTGTCC 58082 .......... .......... .......... .......... .......... .......... 274 TCTTCCTCTA GAGGACGTCC TCCCGCGACC TCTACCACGG CCTCTTGCCA CTGCTCATCT 58022 .......... .......... .......... .......... .......... .......... 274 TCGAGCTACA ACCCCAGTGG CTGGCTCAGA CGCATCTTGT CTTGCCGGTG TTGGTGTTGG 57962 .......... .......... .......... .......... .......... .......... 274 CGCAGTTGTT GCTCTAGTTC TAACCATCTG TGAAATAGAG TGAAGATGGT CAGATACCAA 57902 .......... .......... .......... .......... .......... .......... 274 TTTGTATCAC CTAGATACCA ATTGGATCCA AGTAAAAGCA CGAAAGAAGG AAAGAATGGA 57842 .......... .......... .......... .......... .......... .......... 274 ATTTTCCTAA AGTCTTATAG CCTCTCAAAG AAAAGTAAAG GCGTCCCCCT ACCGTTCCTC 57782 .......... .......... .......... .......... .......... .......... 274 AAGACTCTAC TAGACTTGTT CTTGTGTGAT GAGACCAACG AACCTAATGC TCTGATACCA 57722 .......... .......... .......... .......... .......... .......... 274 AGTTTGTCAC GACCCAAAAC GGGCCGCGAG TGGCACCCAC TCTTACCCTC CTATGTGAGA 57662 .......... .......... .......... .......... .......... .......... 274 GAACCAACCA ATCTAAACCC CAACAATTCA ACGATAATAA ATAGAATATA ATGCGGAAGA 57602 .......... .......... .......... .......... .......... .......... 274 ATTAAAACTC ATTAACGAAA TCAATAATTA ACTTCTAAAA CTCAAAACTT ATCATTATCC 57542 .......... .......... .......... .......... .......... .......... 274 CCAAAATCTG GAAGTCATCA TCACAAGAAC ATCTATCCTC AAATTACTAA ATCTAAGAGT 57482 .......... .......... .......... .......... .......... .......... 274 ATCTAAGAAG CTAAAATAAG TAAAAGAGAT AGTCCATGTC CGAACTTCAA GACATCAAGA 57422 .......... .......... .......... .......... .......... .......... 274 CGCGAAGGAA AGAATCCAGT CCGAGCTAGG AACAATATCT CACCCTGAAA TCTGATTATG 57362 .......... .......... .......... .......... .......... .......... 274 CTGAAGTCTG GCTAGAGTTG CGGTTGAGTC AAAGTCGATG GCACGTTTGC TGCACTCCAC 57302 .......... .......... .......... .......... .......... .......... 274 AAATAACAAG AAAGAAACAT ACAAGTAGGG GTCAGTACAA GGCACAAGTA CTGAGTAGGT 57242 .......... .......... .......... .......... .......... .......... 274 ATCATCGGCC AACTCAAAAT AGAAAACAAC ATATATCATA TAATAACATA AAATCAACTA 57182 .......... .......... .......... .......... .......... .......... 274 CAATACTCAA CAGACAACAA CAACAAGTAC CATAACCATT GGCCACAACC CAAGCGCATC 57122 .......... .......... .......... .......... .......... .......... 274 TATGAGGACT CACTCCTCCA CACCATACTC GTTTGGAAAA TAGTTTCTTT AAACCTGAGT 57062 .......... .......... .......... .......... .......... .......... 274 ATATAAACAT GATTCAAGAT TCATTCTTTT ACTATCCTGG TGTCGGAACG TGACACTCCG 57002 .......... .......... .......... .......... .......... .......... 274 ATCCTTTACT ACTATCCTGA TGTCGGAACG TGACACCCGA TCCACTACTA CTATCCTGGT 56942 .......... .......... .......... .......... .......... .......... 274 GTCGGAACGT GACACCCGAT CCATTACTAC TATCCTGGTG TCGGAACGTG ACACCCGATC 56882 .......... .......... .......... .......... .......... .......... 274 CATTACTACT ATCCTGGTGT CGGGACGTGA TACCCGATCC ACTATTACTA TCCTGGTGTC 56822 .......... .......... .......... .......... .......... .......... 274 GGAACGTGAC ACCCGATCCA CAATTACTAT CCTGGTGTCG GAACGTGACA CCCGATTCAC 56762 .......... .......... .......... .......... .......... .......... 274 TACTACTATC CTGGTGTCGG AACGTGACAC CTGATCCACT AACCTCATTC TTTTAGTTCA 56702 .......... .......... .......... .......... .......... .......... 274 TCAAGCCTTC TTTTATACCA AGGCATCATC ATTAACACAG AGGGTTTTAG GTTTAAGCTT 56642 .......... .......... .......... .......... .......... .......... 274 CACAACCTCA TCTTTCCAAC CCATTACAAT TACATAATCA -CATCATGCA AGCATACAA- 56584 ||| |||| | |||||||| |||||||| ||||||||| .......... .......... TCATCGCAAT TTCATAATCA TAATCATGCA AGCATACAAC 314 TTAAGCATAT GTAAGACTTT ACAATACTAC CCAATACATA TCATTCGCTA TTAAGAGTTT 56524 ||||||| || || ||| ||||||||| ||| ||||| |||| ||| ||||||||| TTAAGCACAT AGCAGGGTTT ACAATACTA- TCAACACATA ATATTCACTA TTAAGAGTTC 373 ACTATGAA-A TAG---CATA AACCATAACC TACCTCCACC GAAGAATTCG TGATCACGCA 56468 |||| ||| | | | |||| |||||||||| |||||||||| |||||||| | |||| || ACTACGAATA TCGTAACATA AACCATAACC TACCTCCACC GAAGAATT-G -AATCA-ACA 430 AGCTA-CTCC TCAAGGTCTT TGCTTTCCTC TTC-ATTCTC TCT-TCT-CT CGCTCGTTCG 56412 ||||| || | |||| || | |||| ||||| ||| ||||| ||| ||| || || ||||| AGCTATCTTC TCAAAATCCT TGCTATCCTC TTCGTTTCTC TCTCTCTACT CGTTCGTTTC 490 TCCCTCTCTT T-TGTTC-TT TC-TAT-TTT T-CCTTATTC AAACTCTTTT TC-TTTTACC 56358 | |||||||| | ||||| || || | | ||| | |||||| |||| || | || ||||||| T-CCTCTCTT TCTGTTCTTT TCTTTTGTTT TGTTTTATTC AAACCCTCCT TCTTTTTACC 549 CTAATTACCA -TATAATTAA GTATAAAAGA TGGTAAAAGT AACCCACTAT TTATTTCAAG 56299 ||||||| | ||||||||| || |||| || || || ||||||||| ||| | ||| CTAATTAAAA GTATAATTAA GTGTAAAGGA -GGACAATAA AACCCACTAA TTAACTTAAG 608 GTTATCACCT TTAACCCCCA AGTAATT-GA ATTATTAACA TTAACCCACT AACTTTATAA 56240 |||| | | | |||||||||| ||||||| || |||||| | ||||||| | | |||||||| GTTACCTCTT TTAACCCCCA AGTAATTAGA CCTATTAATA TTAACCCTCA ATCTTTATAA 668 TTATAAGCAG AAATAGTCCA AAACGCCCCT TAAAACATTT AACAGAAATC 56190 ||| | | | ||||||||| ||||| ||| |||||| | | | || |||| TTA-AGGAAA GAATAGTCCA AAACGACCCC TAAAACGTGT -AGAGGAATC 716 hqPGS_C08HBa0294K15.1-_SGN-E546548- (56621 56190) ******************************************************************************** EST sequence 159 +strand 730 n (File: SGN-E546506+) 1 TTTTTTTTTT TTTTTTTTAA TAAAAACAAT TCAATACTAT TATTATTATC CCCAAAATCT 61 GGAAGTCATC ATCACAAGAA CATCTATCTC AAATTACTTA ACTAGGAATG TCTAAGAACA 121 AAATAACTAA AAAGCTAGTC CATGCCGGAA ATTCAAGGCA TCAAGACTTG AAGAAGAAGA 181 CCCAGTCCAA GCTAGACGCA TTAGCTCACC CTGAATTTTC CGATGAAGTG AAGACTGGCT 241 AGATCTACTG TTGAGTTGAA GTTGACGGAA CGTTTGCTGC ATTACACAAA TAACAAAGAG 301 GAAAACATGA AAGTAGGGGT CAGTACAACC ACACGTACTG AGTAGATATC ATCGGCCAAC 361 TCAAAATAGG GAACAGTATA TATCAATAAT AATGTAAATC AACTACAATA CTCAACATGT 421 AGCAATAACA CCATGAATTC ATCAATAACT ACAACCGAGT TCACACATGA GGACTCAAGC 481 CTCAATACCA TACTCATTTG GGAATTAAGT TCATTAGATT GAGTATATTC ATTATCTTTC 541 AAGATTCATT ATCTTTCTTC CTCTTGTGTC GGTACGTGAC ACTCCGATCC TCTATTTCTA 601 TCCTGGTGCC GGAACGTGGC ACTCCGATCC TCATTCTATC CTGGTACCGG AACGTGGCAC 661 CCGATCCATT TTCTATCCTG GTGTCGGAAC GTGACACTCC GATCCTCATA TTCTATCCTG 721 GTACCGGAAC Predicted gene structure (within gDNA segment 58588 to 56120): Exon 1 57553 56856 ( 698 n); cDNA 40 730 ( 691 n); score: 0.775 PPA cDNA 18 1 MATCH C08HBa0294K15.1- SGN-E546506+ 0.775 698 0.956 C PGS_C08HBa0294K15.1-_SGN-E546506+ (57553 56856) Alignment (genomic DNA sequence = upper lines): TTATCATTAT CCCCAAAATC TGGAAGTCAT CATCACAAGA ACATCTATCC TCAAATTACT 57494 |||| ||||| |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| TTATTATTAT CCCCAAAATC TGGAAGTCAT CATCACAAGA ACATCTAT-C TCAAATTACT 98 AAATCTAAGA GTATCTAAGA AGCTAAAATA AGTAAAAGAG ATAGTCCATG TCCGAACTTC 57434 || ||| || | ||||||| | | |||||| | ||||| || ||||||||| | ||| ||| TAA-CTAGGA ATGTCTAAGA A-C-AAAATA ACTAAAA-AG CTAGTCCATG CCGGAAATTC 154 AAGACATCAA GACGCGAAGG AAAGAATCCA GTCCGAGCTA GGAACAATAT CTCACCCTGA 57374 ||| |||||| ||| |||| | | | ||| |||| ||||| | || || |||||||||| AAGGCATCAA GACTTGAAGA AGAAGACCCA GTCCAAGCTA GACGCATTAG CTCACCCTGA 214 A--ATCTGAT TATGCTGAAG TCTGGCTAGA GTTGCGGTTG AGTCAAAGTC GATGGCACGT 57316 | || ||| | | ||||| ||||||||| | | |||| ||| |||| || || |||| ATTTTCCGAT GAAG-TGAAG ACTGGCTAGA TCTACTGTTG AGTTGAAGTT GACGGAACGT 273 TTGCTGCACT CCACAAATAA C-AAGAAAGA AACATACAAG TAGGGGTCAG TACAAGGCAC 57257 |||||||| | ||||||||| | |||| | ||||| ||| |||||||||| ||||| ||| TTGCTGCATT ACACAAATAA CAAAGAGGAA AACATGAAAG TAGGGGTCAG TACAA-CCAC 332 AAGTACTGAG TAGGTATCAT CGGCCAACTC AAAATAGAAA ACAACATATA TCATATAATA 57197 | |||||||| ||| |||||| |||||||||| ||||||| | ||| ||||| ||| |||||| ACGTACTGAG TAGATATCAT CGGCCAACTC AAAATAGGGA ACAGTATATA TCA-ATAATA 391 ACATAAAATC AACTACAATA CTCAACAGAC AACAACAACA -AGTACCATA ACCATTGGCC 57138 | | ||||| |||||||||| ||||||| | ||| |||| | | | || | | ATGT-AAATC AACTACAATA CTCAACATGT AGCAATAACA CCATGAATTC ATCAATAACT 450 ACAACCCAAG CGCATCTATG AGGACTCACT CCTCCACACC ATACTCGTTT GGAAAATAGT 57078 |||| || || || ||| |||||||| |||| | ||| |||||| ||| || || || ACAA-CCGAG TTCACACATG AGGACTCAAG CCTCAATACC ATACTCATTT GGGAATTAAG 509 TTCTTTAAAC CTGAGTATA- TAAACATGAT TCAAGATTCA TTCTTTTACT ATC-CTGGTG 57020 ||| ||| | |||||||| | | || | |||||||||| || | || || | || ||| TTCATTAGA- TTGAGTATAT TCATTATCTT TCAAGATTCA TTATCTTTCT TCCTCTTGTG 568 TCGGAACGTG ACACTCCGAT CCTTTACTAC TATCCTGATG TCGGAACGTG ACAC-CCGAT 56961 |||| ||||| |||||||||| ||| || | | ||||||| || ||||||||| ||| ||||| TCGGTACGTG ACACTCCGAT CCTCTATTTC TATCCTGGTG CCGGAACGTG GCACTCCGAT 628 CCACTACTAC TATCCTGGTG TCGGAACGTG ACACCCGATC CATTACTACT ATCCTGGTGT 56901 || | | | | ||||||||| ||||||||| ||||||||| |||| | || |||||||||| CCTC-A-TTC TATCCTGGTA CCGGAACGTG GCACCCGATC CATT--TTCT ATCCTGGTGT 684 CGGAACGTGA CAC-CCGATC CATTACTACT ATCCTGGTGT CGGGAC 56856 |||||||||| ||| |||||| | | || |||||||| ||| || CGGAACGTGA CACTCCGATC CTCATATTCT ATCCTGGTAC CGGAAC 730 hqPGS_C08HBa0294K15.1-_SGN-E546506+ (57553 56856) ******************************************************************************** EST sequence 2 -strand 605 n (File: SGN-E347579-) 1 ATCCCCTAAT TCTACGTGTC GGTTCGTGAC ACCCGATCCC CTAATTCTAC GTGTCGGTTC 61 GTGACACCTG ATCCCCTAAT CTACGTGCCG GTTCGTGACA CCCGATCCCC TAATTCTACG 121 TGCCAGTTCG TGACACCCGA TCCCCTAATT CTACGTGTCG GTTCGTGACA CCCGATCCCC 181 TGCATGTGTC GGTACGTGAC ACTCCGATCC ACTAATATCA TTCTGTAAAT CATCAGGCCT 241 TCTCTATACC AAGGCATCAT CAATCCCATT ACTTTTATTC ATCAAGCCTT CTTCTATACC 301 AAGGCATCAT CATTAATAAG AGATTAGATT TTTATCAAGA TTTGGGATTC AATAACTTCA 361 TCATGCTTAA TATAATCACA ATTATATAAT CACGTTCATG CATGCATACA ATTAAGCATA 421 TAGCAGGGTT TACAATACTA CCAATACATA TCATTCTCTA TTAAGAGTTT ACTATGAAAG 481 CATGAAAACC ATAACCTACC TCCACCGAAG ATTAGTGATC AAGCAAGCAA ATTTTTCTCC 541 AAGCTTTGTT TCTCCCTTCT CGTTCGATTC TTCCTCTCTC TCTTGTTCTT TCTATTTTCT 601 TTATT Predicted gene structure (within gDNA segment 60085 to 54943): Exon 1 56981 56881 ( 101 n); cDNA 86 178 ( 93 n); score: 0.762 Intron 1 56880 56834 ( 47 n); Pd: 0.000 (s: 0.80), Pa: 0.000 (s: 0.68) Exon 2 56833 56786 ( 48 n); cDNA 179 227 ( 49 n); score: 0.677 Intron 2 56785 56756 ( 30 n); Pd: 0.000 (s: 0.68), Pa: 0.000 (s: 0.46) ?? Exon 3 56755 56472 ( 284 n); cDNA 228 521 ( 294 n); score: 0.671 MATCH C08HBa0294K15.1- SGN-E347579- 0.695 433 0.716 C PGS_C08HBa0294K15.1-_SGN-E347579- (56981 56881,56833 56786,56755 56472) Alignment (genomic DNA sequence = upper lines): TGTCGGAACG TGACACCCGA TCCACTACTA CTATCCTGGT GTCGGAACGT GACACCCGAT 56922 || ||| || |||||||||| ||| ||| | ||| | || | | | ||| |||||||||| TGCCGGTTCG TGACACCCGA TCCCCTAATT CTA--C--GT GCCAGTTCGT GACACCCGAT 141 CCATTACTAC TATCCTGGTG TCGGAACGTG ACACCCGATC CATTACTACT ATCCTGGTGT 56862 || || | | || | ||| |||| |||| |||||||||| | CCCCTAATTC TA--C--GTG TCGGTTCGTG ACACCCGATC C......... .......... 178 CGGGACGTGA TACCCGATCC ACTATTACTA TCCTGGTGTC GGAACGTGAC AC-CCGATCC 56803 | | ||||| || ||||||| || ||||||| .......... .......... ........CC TGCATGTGTC GGTACGTGAC ACTCCGATCC 210 ACAATTACTA TCCTGGTGTC GGAACGTGAC ACCCGATTCA CTACTACTAT CCTGGTGTCG 56743 || | || | | ||| || | | | | ACTAATATCA TTCTGTA... .......... .......... .......AAT CATCAGGCCT 240 GAACGTGACA CCTGATCCAC TAACCTCATT -CTTTTAGTT CATCAAGCCT TCTTTTATAC 56684 | || | || || | |||| |||||| || |||||||||| |||| ||||| TCTCTATACC AAGGCATCAT CAATCCCATT ACTTTTA-TT CATCAAGCCT TCTTCTATAC 299 CAAGGCATCA TCATTAA-CA CAG---AGGG TTTTA--G-G -TTTAAGCTT C-ACAACCTC 56633 |||||||||| ||||||| | || || ||||| | ||| | || | | ||| || CAAGGCATCA TCATTAATAA GAGATTAGAT TTTTATCAAG ATTTGGGATT CAATAACTTC 359 ATCTTTC-CA A-CCCATTAC AATTACATAA TCACAT-CAT GCAAGCATAC AATTAAGCAT 56576 ||| | | | | || || ||||| |||| |||| | ||| ||| |||||| |||||||||| ATCATGCTTA ATATAATCAC AATTATATAA TCACGTTCAT GCATGCATAC AATTAAGCAT 419 ATGTAAGACT TTACAATACT ACCCAATACA TATCATTCGC TATTAAGAGT TTACTATGAA 56516 || || | |||||||||| | |||||||| |||||||| | |||||||||| |||||||||| ATAGCAGGGT TTACAATACT A-CCAATACA TATCATTCTC TATTAAGAGT TTACTATGAA 478 ATAGCATAAA CCATAACCTA CCTCCACCGA AGAATTCGTG ATCA 56472 | ||| |||||||||| |||||||||| || ||| ||| |||| AGCATGAAAA CCATAACCTA CCTCCACCGA AG-ATTAGTG ATCA 521 hqPGS_C08HBa0294K15.1-_SGN-E347579- (56981 56881) ******************************************************************************** EST sequence 23 -strand 729 n (File: SGN-E351546-) 1 AGTCGTTGCT CTAGTTCTAC CCATCTGGCA AGAGAGTGAG NATGGTCAGA TACCAATTCG 61 TATCGCTTAG ATACCAATTG ACTCGAAGTA GTAGCACGAA AGAAAGAATG AAAGAGTGAA 121 GTTTTCCTAA AGTCTTATAG CCTCTCAAGG AAAAGTAAAA GCGTCCCCCT ACCGTTCCTT 181 AAGACTCTAC TAGACTTGTT CTTGTGTGAT GAGACCAACG AACCTAATGC TCTGATACCA 241 AGTTTTGTCA CGACCCAAAT CCGGGCCGCC ACTGGCACCC ACACTTACCC TCCTATGTGA 301 GCGAACCAAC CAATCTAAAC CTTAACATTT CAATGTAATA GCAACAGAAA GTAATGCGGA 361 AGACTTAAAC TCATTAATAA AATCAATAAC TACTATTATT AAACATCTAT TATTCCCAAA 421 ACCTGGAAGT CATCATCACA AGAACATCTA CTTTAAACTA CTAATTCTAA GAGTTTCTAA 481 GAAGCTAAAA AATTACATAA GAAGCTAGTC CATGCCGGAA GTTCAAGGCA TCAAGACATG 541 AAGGAGAAGA TCCAGTCCAA GCTAGAAGCG TTAGCTCACC CTGAAGATCC GGTGTGACGA 601 AGACTGGCTT GAGTTACTGT TGAGTCGAAG ATGACGGCAC GTTTGCTGCA CTCCACAAAT 661 ACCAAGAAGA AAAACATAAA AGTAGGGGTC AGTACAAAAC ACGGCTACTG AGTAGATATC 721 ATCGGCCAA Predicted gene structure (within gDNA segment 59660 to 56342): Exon 1 57958 57230 ( 729 n); cDNA 1 729 ( 729 n); score: 0.818 MATCH C08HBa0294K15.1- SGN-E351546- 0.818 729 1.000 C PGS_C08HBa0294K15.1-_SGN-E351546- (57958 57230) Alignment (genomic DNA sequence = upper lines): AGTTGTTGCT CTAGTTCTAA CCATCTGTGA AATAGAGTGA AGATGGTCAG ATACCAATTT 57899 ||| |||||| ||||||||| ||||||| | || ||||||| |||||||| ||||||||| AGTCGTTGCT CTAGTTCTAC CCATCTG-GC AAGAGAGTGA GNATGGTCAG ATACCAATTC 59 GTATCACCTA GATACCAATT GGATCCAAGT AAAAGCACGA AAGAAGGAAA GAATG-G--A 57842 ||||| | || |||||||||| | || |||| | ||||||| ||||| ||| ||| | | | GTATCGCTTA GATACCAATT GACTCGAAGT AGTAGCACGA AAGAAAGAAT GAAAGAGTGA 119 A-TTTTCCTA AAGTCTTATA GCCTCTCAAA GAAAAGTAAA GGCGTCCCCC TACCGTTCCT 57783 | |||||||| |||||||||| ||||||||| |||||||||| ||||||||| |||||||||| AGTTTTCCTA AAGTCTTATA GCCTCTCAAG GAAAAGTAAA AGCGTCCCCC TACCGTTCCT 179 CAAGACTCTA CTAGACTTGT TCTTGTGTGA TGAGACCAAC GAACCTAATG CTCTGATACC 57723 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGACTCTA CTAGACTTGT TCTTGTGTGA TGAGACCAAC GAACCTAATG CTCTGATACC 239 AAG-TTTGTC ACGACCCAAA -ACGGGCCGC GAGTGGCACC CACTCTTACC CTCCTATGTG 57665 ||| |||||| |||||||||| |||||||| | ||||||| ||| |||||| |||||||||| AAGTTTTGTC ACGACCCAAA TCCGGGCCGC CACTGGCACC CACACTTACC CTCCTATGTG 299 AGAGAACCAA CCAATCTAAA CCCCAACAAT TCAACGATAA TA--AATAGA ATATAATGCG 57607 || ||||||| |||||||||| || |||| | |||| | ||| || || ||| | ||||||| AGCGAACCAA CCAATCTAAA CCTTAACATT TCAATG-TAA TAGCAACAGA AAGTAATGCG 358 GAAGAATTAA AACTCATTAA CGAAATCAAT AATTAACTTC TAAAACTCAA AACTTATCAT 57547 ||||| || | |||||||||| ||||| || ||||| | || | | | ||| | | || GAAGACTT-A AACTCATTAA TAAAATC--- AA-TAACTAC TATTA-T-TA AACATCT-AT 410 TATCCCCAAA ATCTGGAAGT CATCATCACA AGAACATCTA TCCTCAAATT ACTAAATCTA 57487 ||| |||||| | |||||||| |||||||||| |||||||||| | | ||| | ||||| |||| TATTCCCAAA ACCTGGAAGT CATCATCACA AGAACATCTA -CTTTAAACT ACTAATTCTA 469 AGAGTATCTA AGAAGCTAAA ATAAGTA-A- AAG-AGATAG TCCATGTCCG AACTTCAAGA 57430 ||||| |||| |||||||||| | || || | ||| || ||| |||||| | | || |||||| AGAGTTTCTA AGAAGCTAAA A-AATTACAT AAGAAGCTAG TCCATGCCGG AAGTTCAAGG 528 CATCAAGACG CGAAGGAAAG AATCCAGTCC GAGCTAGGAA CAATATCTCA CCCTGAA-AT 57371 ||||||||| |||||| | ||||||||| |||||| | | || |||| ||||||| || CATCAAGACA TGAAGGAGAA GATCCAGTCC AAGCTAGAAG CGTTAGCTCA CCCTGAAGAT 588 CTGATTATGC TGAAGTCTGG CTAGAGTTGC GGTTGAGTCA AAGTCGATGG CACGTTTGCT 57311 | | | || |||| |||| || ||||| | |||||||| ||| || || |||||||||| CCG-GTGTGA CGAAGACTGG CTTGAGTTAC TGTTGAGTCG AAGATGACGG CACGTTTGCT 647 GCACTCCACA AATAACAAGA A-AGAAACAT ACAAGTAGGG GTCAGTACAA GGCACAAGTA 57252 |||||||||| |||| ||||| | | |||||| | |||||||| |||||||||| ||| || GCACTCCACA AATACCAAGA AGAAAAACAT AAAAGTAGGG GTCAGTACAA AACACGGCTA 707 CTGAGTAGGT ATCATCGGCC AA 57230 |||||||| | |||||||||| || CTGAGTAGAT ATCATCGGCC AA 729 hqPGS_C08HBa0294K15.1-_SGN-E351546- (57958 57230) ******************************************************************************** EST sequence 63 -strand 655 n (File: SGN-E356696-) 1 CAATTGGACT CAAGTAGTAG CACGAAAGAA AGAATGAAAG AGTGAAGTTT TCCTAAAGTC 61 TTATAGCCTC TCAAGGAAAA GTAAAAGCGT CCCCCTACCG TTCCTTAAGA CTCTACTAGA 121 CTTGTTCTTG TGTGATGAGA CCAACGAACC TAATGCTCTG ATACCAAGTT TTGTCACGAC 181 CCAAATCCGG GCCGCCACTG GCACCCACAC TTACCCTCNT ATGTGAGCGA ACCAACCAAT 241 CTAAACCTTA ACATTTCAAT GTAATAGCAA CAGAAAGTAA TGCGGAAGAC TTAAACTCAT 301 TAATAAAATC AATAACTACT ATTATTAAAC ATCTATTATT CCCAAAACCT GGAAGTCATC 361 ATCACAAGAA CATCTACTTT AAACTACTAA TTCTAAGAGT TTCTAAGAAG CTAAAAAATT 421 ACATAAGAAG CTAGTCCATG CCGGAAGTTC AAGGCATCAA GACATGAAGG AGAAGATCCA 481 GTCCAAGCTA GAAGCGTTAG CTCACCCTGA AGATCCGGTG TGACGAAGAC TGGCTTGAGT 541 TACTGTTGAG TCGAAGATGA CGGCACGTTT GCTGCACTCC ACAAATAACA AGAAGAAAAA 601 CATAAAAGTA GGGGTCAGTA CAAAACACGG CTACTGAGTA GATATCATCG GCCAA Predicted gene structure (within gDNA segment 58920 to 56342): Exon 1 57860 57230 ( 631 n); cDNA 28 655 ( 628 n); score: 0.828 MATCH C08HBa0294K15.1- SGN-E356696- 0.828 631 0.963 C PGS_C08HBa0294K15.1-_SGN-E356696- (57860 57230) Alignment (genomic DNA sequence = upper lines): GAAAGAAGGA AAGAATGGAA TTTTCCTAAA GTCTTATAGC CTCTCAAAGA AAAGTAAAGG 57801 ||||||| || |||| || | |||||||||| |||||||||| ||||||| || |||||||| | GAAAGAATGA AAGAGTGAAG TTTTCCTAAA GTCTTATAGC CTCTCAAGGA AAAGTAAAAG 87 CGTCCCCCTA CCGTTCCTCA AGACTCTACT AGACTTGTTC TTGTGTGATG AGACCAACGA 57741 |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| CGTCCCCCTA CCGTTCCTTA AGACTCTACT AGACTTGTTC TTGTGTGATG AGACCAACGA 147 ACCTAATGCT CTGATACCAA G-TTTGTCAC GACCCAAA-A CGGGCCGCGA GTGGCACCCA 57683 |||||||||| |||||||||| | |||||||| |||||||| |||||||| | ||||||||| ACCTAATGCT CTGATACCAA GTTTTGTCAC GACCCAAATC CGGGCCGCCA CTGGCACCCA 207 CTCTTACCCT CCTATGTGAG AGAACCAACC AATCTAAACC CCAACAATTC AACGATAATA 57623 | |||||||| | |||||||| ||||||||| |||||||||| |||| ||| || | ||||| CACTTACCCT CNTATGTGAG CGAACCAACC AATCTAAACC TTAACATTTC AATG-TAATA 266 --AATAGAAT ATAATGCGGA AGAATTAAAA CTCATTAACG AAATCAATAA TTAACTTCTA 57565 || |||| ||||||||| ||| || ||| |||||||| ||||| || ||||| ||| GCAACAGAAA GTAATGCGGA AGACTT-AAA CTCATTAATA AAATC---AA -TAACTACTA 321 AAACTCAAAA CTTATCATTA TCCCCAAAAT CTGGAAGTCA TCATCACAAG AACATCTATC 57505 | | ||| | | | |||| | ||||||| |||||||||| |||||||||| |||||||| | TTA-T-TAAA CATCT-ATTA TTCCCAAAAC CTGGAAGTCA TCATCACAAG AACATCTA-C 377 CTCAAATTAC TAAATCTAAG AGTATCTAAG AAGCTAAAAT AAGTA-A-AA G-AGATAGTC 57448 | ||| ||| ||| |||||| ||| |||||| ||||||||| || || | || | || ||||| TTTAAACTAC TAATTCTAAG AGTTTCTAAG AAGCTAAAA- AATTACATAA GAAGCTAGTC 436 CATGTCCGAA CTTCAAGACA TCAAGACGCG AAGGAAAGAA TCCAGTCCGA GCTAGGAACA 57388 |||| | ||| |||||| || ||||||| | ||||| | | |||||||| | ||||| | | CATGCCGGAA GTTCAAGGCA TCAAGACATG AAGGAGAAGA TCCAGTCCAA GCTAGAAGCG 496 ATATCTCACC CTGAA-ATCT GATTATGCTG AAGTCTGGCT AGAGTTGCGG TTGAGTCAAA 57329 || |||||| ||||| ||| | | || | ||| |||||| ||||| | | ||||||| || TTAGCTCACC CTGAAGATCC G-GTGTGACG AAGACTGGCT TGAGTTACTG TTGAGTCGAA 555 GTCGATGGCA CGTTTGCTGC ACTCCACAAA TAACAAGAA- AGAAACATAC AAGTAGGGGT 57270 | || |||| |||||||||| |||||||||| ||||||||| | ||||||| |||||||||| GATGACGGCA CGTTTGCTGC ACTCCACAAA TAACAAGAAG AAAAACATAA AAGTAGGGGT 615 CAGTACAAGG CACAAGTACT GAGTAGGTAT CATCGGCCAA 57230 |||||||| ||| |||| |||||| ||| |||||||||| CAGTACAAAA CACGGCTACT GAGTAGATAT CATCGGCCAA 655 hqPGS_C08HBa0294K15.1-_SGN-E356696- (57860 57230) ******************************************************************************** EST sequence 58 -strand 580 n (File: SGN-E356206-) 1 GAAAAGTAAA AGCGTCCCCN TACCGTCCCT TAAGACTCTA CTAGACTTGT TCTTGTGTGA 61 TGAGACCAAC GACCCTAATG CTCTGATACC AAGTTTTGTC ACGACCCAAA TCCGGGCCGC 121 CACTGGCACC CACACTTACC CTCCTATGTG AGCGAACCAA CCAATCTAAA CCTTAACATT 181 TCAATGTAAT AGCAACAGAA AGTAATGCGG AAGACTTAAA CTCATTAATA AAATCAATAA 241 CTACTATTAT TAAACATCTA TTATTCCCAA AACCTGGAAG TCATCATCAC AAGAACATCT 301 ACTTTAAACT ACTAATTCTA AGAGTTTCTA AGAAGCTAAA AAATTACATA AGAAGCTAGT 361 CCATGCCGGA AGTTCAAGGC ATCAAGACAT GAAGGAGAAG ATCCAGTCCA AGCTAGAAGC 421 GTTAGCTCAC CCTGAAGATC CGGTGTGACG AAGACTGGCT TGAGTTACTG TTGAGTCGAA 481 GATGACGGCA CGTTTGCTGC ACTCCACAAA TAACAAGAAG AAAAACATAA AAGTAGGGGT 541 CAGTACAAAA CACGGCTACT GAGTAGATAT CATCGGCCAA Predicted gene structure (within gDNA segment 58701 to 56342): Exon 1 57812 57230 ( 583 n); cDNA 1 580 ( 580 n); score: 0.819 MATCH C08HBa0294K15.1- SGN-E356206- 0.819 583 1.005 C PGS_C08HBa0294K15.1-_SGN-E356206- (57812 57230) Alignment (genomic DNA sequence = upper lines): GAAAAGTAAA GGCGTCCCCC TACCGTTCCT CAAGACTCTA CTAGACTTGT TCTTGTGTGA 57753 |||||||||| |||||||| |||||| ||| ||||||||| |||||||||| |||||||||| GAAAAGTAAA AGCGTCCCCN TACCGTCCCT TAAGACTCTA CTAGACTTGT TCTTGTGTGA 60 TGAGACCAAC GAACCTAATG CTCTGATACC AAG-TTTGTC ACGACCCAAA -ACGGGCCGC 57695 |||||||||| || ||||||| |||||||||| ||| |||||| |||||||||| |||||||| TGAGACCAAC GACCCTAATG CTCTGATACC AAGTTTTGTC ACGACCCAAA TCCGGGCCGC 120 GAGTGGCACC CACTCTTACC CTCCTATGTG AGAGAACCAA CCAATCTAAA CCCCAACAAT 57635 | ||||||| ||| |||||| |||||||||| || ||||||| |||||||||| || |||| | CACTGGCACC CACACTTACC CTCCTATGTG AGCGAACCAA CCAATCTAAA CCTTAACATT 180 TCAACGATAA TA--AATAGA ATATAATGCG GAAGAATTAA AACTCATTAA CGAAATCAAT 57577 |||| | ||| || || ||| | ||||||| ||||| || | |||||||||| ||||| TCAATG-TAA TAGCAACAGA AAGTAATGCG GAAGACTT-A AACTCATTAA TAAAATC--- 235 AATTAACTTC TAAAACTCAA AACTTATCAT TATCCCCAAA ATCTGGAAGT CATCATCACA 57517 || ||||| | || | | | ||| | | || ||| |||||| | |||||||| |||||||||| AA-TAACTAC TATTA-T-TA AACATCT-AT TATTCCCAAA ACCTGGAAGT CATCATCACA 291 AGAACATCTA TCCTCAAATT ACTAAATCTA AGAGTATCTA AGAAGCTAAA ATAAGTA-A- 57459 |||||||||| | | ||| | ||||| |||| ||||| |||| |||||||||| | || || | AGAACATCTA -CTTTAAACT ACTAATTCTA AGAGTTTCTA AGAAGCTAAA A-AATTACAT 349 AAG-AGATAG TCCATGTCCG AACTTCAAGA CATCAAGACG CGAAGGAAAG AATCCAGTCC 57400 ||| || ||| |||||| | | || |||||| ||||||||| |||||| | ||||||||| AAGAAGCTAG TCCATGCCGG AAGTTCAAGG CATCAAGACA TGAAGGAGAA GATCCAGTCC 409 GAGCTAGGAA CAATATCTCA CCCTGAA-AT CTGATTATGC TGAAGTCTGG CTAGAGTTGC 57341 |||||| | | || |||| ||||||| || | | | || |||| |||| || ||||| | AAGCTAGAAG CGTTAGCTCA CCCTGAAGAT CCG-GTGTGA CGAAGACTGG CTTGAGTTAC 468 GGTTGAGTCA AAGTCGATGG CACGTTTGCT GCACTCCACA AATAACAAGA A-AGAAACAT 57282 |||||||| ||| || || |||||||||| |||||||||| |||||||||| | | |||||| TGTTGAGTCG AAGATGACGG CACGTTTGCT GCACTCCACA AATAACAAGA AGAAAAACAT 528 ACAAGTAGGG GTCAGTACAA GGCACAAGTA CTGAGTAGGT ATCATCGGCC AA 57230 | |||||||| |||||||||| ||| || |||||||| | |||||||||| || AAAAGTAGGG GTCAGTACAA AACACGGCTA CTGAGTAGAT ATCATCGGCC AA 580 hqPGS_C08HBa0294K15.1-_SGN-E356206- (57812 57230) ******************************************************************************** EST sequence 150 +strand 710 n (File: SGN-E392027+) 1 CCACAGCCCC AGTGGCTGGC TCAGTCGCAC CCTGTCCCGC CGGTGCTGGT GTTGATGCTG 61 GCGTAGTCGT TGCTCTAGTT CTAACCATCT GCGAAATAGA GTGAAGATGG TCAGATACCA 121 ATTTGTATCA CCTAGATACC AATTGGACCC AAGTAATAGC ACGAAAGAAG AAAGAATGGA 181 ATTTTCCAAA AGTCTTATAG CCTCTCAAGG AAAAGTAAAG GCATCCCCCT ACCGTTCCTT 241 AAGACTCTAC TAGACTCGTT CTTGTGTGAT GAGACCAACG AACCTAATGC TCTGATACCA 301 AGTTTGTCAC GACCAAAACC GGGTTGCGAC TGGCACCCAC ACTTACCCTC CTATGTGAGC 361 GAACCAACCA ATCTAACCTT AACATTTCAA TATAATATCA ACAGAAAGTA ATGTGGAAGA 421 CTTAAACTCA TTAAATACAG ACCAATTCAT TAACTTCTAA AATTCAACAT CTATTATTCC 481 CCAAAATCTG GAAGTCATCA CCACAAGAAC ATCTACGATC AAATGACTAA ACTAAGAGTA 541 GTCTAAAAGC TAAAAATACA TAAGAAGCTA GTCCATGCCG GAAGTTCAAG GCATCAAGAC 601 TTGAAGAAGA AGATCCAGTC CAAGCTAGAA GCATTAGCTC ACCCTGAATT TCCGATGTAG 661 TAAGACTGGC TTGAATTACT GTTGAGTTGA ACACGATGGC ACGTTTGCTG Predicted gene structure (within gDNA segment 59234 to 53696): Exon 1 57979 57310 ( 670 n); cDNA 44 710 ( 667 n); score: 0.840 MATCH C08HBa0294K15.1- SGN-E392027+ 0.840 670 0.944 C PGS_C08HBa0294K15.1-_SGN-E392027+ (57979 57310) Alignment (genomic DNA sequence = upper lines): TGCCGGTGTT GGTGTTGGCG CAGTTGTTGC TCTAGTTCTA ACCATCTGTG AAATAGAGTG 57920 ||| |||||| | || ||||| ||| ||||| |||||||||| |||||||| | |||||||||| TGCTGGTGTT GATGCTGGCG TAGTCGTTGC TCTAGTTCTA ACCATCTGCG AAATAGAGTG 103 AAGATGGTCA GATACCAATT TGTATCACCT AGATACCAAT TGGATCCAAG TAAAAGCACG 57860 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| ||| |||||| AAGATGGTCA GATACCAATT TGTATCACCT AGATACCAAT TGGACCCAAG TAATAGCACG 163 AAAGAAGGAA AGAATGGAAT TTTCCTAAAG TCTTATAGCC TCTCAAAGAA AAGTAAAGGC 57800 |||||| ||| |||||||||| ||||| |||| |||||||||| |||||| ||| |||||||||| AAAGAA-GAA AGAATGGAAT TTTCCAAAAG TCTTATAGCC TCTCAAGGAA AAGTAAAGGC 222 GTCCCCCTAC CGTTCCTCAA GACTCTACTA GACTTGTTCT TGTGTGATGA GACCAACGAA 57740 ||||||||| ||||||| || |||||||||| |||| ||||| |||||||||| |||||||||| ATCCCCCTAC CGTTCCTTAA GACTCTACTA GACTCGTTCT TGTGTGATGA GACCAACGAA 282 CCTAATGCTC TGATACCAAG TTTGTCACGA CCCAAAACGG GCCGCGAGTG GCACCCACTC 57680 |||||||||| |||||||||| |||||||||| || ||| ||| | |||| || |||||||| | CCTAATGCTC TGATACCAAG TTTGTCACGA CCAAAACCGG GTTGCGACTG GCACCCACAC 342 TTACCCTCCT ATGTGAGAGA ACCAACCAAT CTAAACCCCA ACAATTCAAC GATAATA--A 57622 |||||||||| ||||||| || |||||||||| || |||| | ||| ||||| |||||| | TTACCCTCCT ATGTGAGCGA ACCAACCAAT CT-AACCTTA ACATTTCAA- TATAATATCA 400 ATAGAATATA ATGCGGAAGA ATTAAAACTC ATTAACGA-A -ATCAA-TAA TTAACTTCTA 57565 | |||| || ||| |||||| || |||||| ||||| | | | ||| | | |||||||||| ACAGAAAGTA ATGTGGAAGA CTT-AAACTC ATTAAATACA GACCAATTCA TTAACTTCTA 459 AAACTCAAAA CTTATCATTA TCCCCAAAAT CTGGAAGTCA TCATCACAAG AACATCTATC 57505 ||| |||| | ||| | | |||||||||| |||||||||| ||| |||||| |||||||| AAATTCAACA TCTATTA-T- TCCCCAAAAT CTGGAAGTCA TCACCACAAG AACATCTACG 517 CTCAAATTAC TAAATCTAAG AGTA-TCTAA GAAGCT-AAA ATAAGTAAAA GAGATAGTCC 57447 |||||| || |||| ||||| |||| ||||| ||||| ||| ||| ||| | || |||||| ATCAAATGAC TAAA-CTAAG AGTAGTCTAA -AAGCTAAAA ATACATAAGA -AGCTAGTCC 574 ATGTCCGAAC TTCAAGACAT CAAGACGCGA AGGAAAGAAT CCAGTCCGAG CTAGGAACAA 57387 ||| | ||| |||||| ||| |||||| || || | | || ||||||| || |||| | || ATGCCGGAAG TTCAAGGCAT CAAGACTTGA AGAAGAAGAT CCAGTCCAAG CTAGAAGCAT 634 TATCTCACCC TGAAATCTGA TTATGCTGAA GTCTGGCTAG AGTTGCGGTT GAGTCAAAGT 57327 || ||||||| |||| | | | | || | |||||| | | || | ||| |||| || TAGCTCACCC TGAATTTCCG ATGTAGT-AA GACTGGCTTG AATTACTGTT GAGTTGAACA 693 CGATGGCACG TTTGCTG 57310 |||||||||| ||||||| CGATGGCACG TTTGCTG 710 hqPGS_C08HBa0294K15.1-_SGN-E392027+ (57979 57310) ******************************************************************************** EST sequence 80 +strand 679 n (File: SGN-E370357+) 1 TTTTTTTTTT CTTACAATTA TATTATGAAT TCGATAATCT TTAATGTCAC GACCCAAATC 61 GAGCCGCAAG TGGCACCCAC ACTTACCCTC CTATGTGAGC GAACCAACCA ATACAAAATC 121 CAACATTTCA ATATAATGAC GGAATATAAT GCGGAAGACT TAAACTCATT AATGAAAATC 181 AATTAAATAA CTTCTAAAAA CTCAACAACT ATTATTATCC CCAAAATCTG GAAGTCATCA 241 TCACAAGAAC ATCTATCCTC AAATTACTAA TTCTAAGAGT ATCTAGAAAG CTAGAATAAC 301 TAAAAAGCTA GTCCATGCCG GAACTTCAAG GCATCAAGAC ATGAAGAAGA AGATCCAGTC 361 CAAGCTAGAA GCGTTAGCTC ACACTGAAAT CCGGTATAAT GAAGACTGGC TAGAGTTGCG 421 GTTGAGTTGA AGACGACGGT ACGTTTGCTT TATTCGAGTG TCAATTAATC ATTCGGCTGT 481 CACCCAAATA TTATTGATTG ATTACACCTC TGCCATTTGT AAAATTTTTC AAATTTGCCT 541 ACGGATGCAG AATTTTCCTC GAATTTCTGA TGTGTTTTCT TGTAAATAGT GGCCATTTGT 601 GTAAGTAAAT GCCCATTTCT CCTCCTACAA AGTCCAATTC CATTTTTCCC CCAATCCACC 661 ATGGCAACAC CACCTCCAA Predicted gene structure (within gDNA segment 60278 to 52792): Exon 1 57717 57311 ( 407 n); cDNA 45 449 ( 405 n); score: 0.839 PPA cDNA 13 1 MATCH C08HBa0294K15.1- SGN-E370357+ 0.839 407 0.599 C PGS_C08HBa0294K15.1-_SGN-E370357+ (57717 57311) Alignment (genomic DNA sequence = upper lines): TGTCACGACC CAAAACGGGC CGCGAGTGGC ACCCACTCTT ACCCTCCTAT GTGAGAGAAC 57658 |||||||||| |||| || || ||| |||||| |||||| ||| |||||||||| ||||| |||| TGTCACGACC CAAATCGAGC CGCAAGTGGC ACCCACACTT ACCCTCCTAT GTGAGCGAAC 104 CAACCAATCT AAACCCCAAC AATTCAACGA TAATAAATAG AATATAATGC GGAAGAATTA 57598 |||||||| ||| ||||| | ||||| | |||| | | |||||||||| |||||| || CAACCAATAC AAAATCCAAC ATTTCAA-TA TAAT-GACGG AATATAATGC GGAAGACTT- 161 AAACTCATTA ACG-AAATCA A-TAATTAAC TTCT-AAAAC TCAAAACTTA TCATTATCCC 57541 |||||||||| | | |||||| | ||| |||| |||| ||||| |||| | || | |||||||| AAACTCATTA ATGAAAATCA ATTAAATAAC TTCTAAAAAC TCAACAACTA TTATTATCCC 221 CAAAATCTGG AAGTCATCAT CACAAGAACA TCTATCCTCA AATTACTAAA TCTAAGAGTA 57481 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| CAAAATCTGG AAGTCATCAT CACAAGAACA TCTATCCTCA AATTACTAAT TCTAAGAGTA 281 TCTAAGAAGC TAAAATAAGT AAAAGAGATA GTCCATGTCC GAACTTCAAG ACATCAAGAC 57421 |||| |||| || ||||| | |||| || || ||||||| | |||||||||| ||||||||| TCTAGAAAGC TAGAATAACT AAAA-AGCTA GTCCATGCCG GAACTTCAAG GCATCAAGAC 340 GCGAAGGAAA GAATCCAGTC CGAGCTAGGA ACAATATCTC ACCCTGAAAT CTGATTATGC 57361 |||| | | |||||||| | |||||| | | || ||| || ||||||| | | ||| ATGAAGAAGA AGATCCAGTC CAAGCTAGAA GCGTTAGCTC ACACTGAAAT CCG-GTATAA 399 TGAAGTCTGG CTAGAGTTGC GGTTGAGTCA AAGTCGATGG CACGTTTGCT 57311 ||||| |||| |||||||||| |||||||| ||| ||| || ||||||||| TGAAGACTGG CTAGAGTTGC GGTTGAGTTG AAGACGACGG TACGTTTGCT 449 hqPGS_C08HBa0294K15.1-_SGN-E370357+ (57717 57311) ******************************************************************************** EST sequence 156 +strand 835 n (File: SGN-E546219+) 1 TTTTTTTTTT ATTAACGTAA TCAATTAAAT AAACTTCTAA AGTTTAATAT TTATTAATCC 61 CAAAATCTGG AAGTCATCAC ATCAATAACA TCTATCCTCA GTAAATCTAA GAGTATTTAA 121 GAAGCTAAAA TAAGTAAAAA GAAAACGGTC CATGTCCGAA CTTCAAGACA TCAAGACGTG 181 AGGGAGAGAA TCCAGTCCGA GCTAGGAATA ATAGCTCACC CTGAAATCTG ATGTGCTGGA 241 GACTGGCTAG AGTTGAAGGC GGGTCGAAGT TGATGGTGCA CTTGCTTCTT ACAACTCATC 301 CTTCACTTGA TCTGTTTGAG TTTGTGATAT GCTAAAATCA AAGGCAGGGC TACCTCTGTT 361 TGTCTGGATA AATTCAATAA TGGCCTCTTT TGTTCTATTA CCCTCAAACC GTGACAAACT 421 ACCCGTTGAA GATCTCAAGT ATAAAGTTGG GAATCCTTCA ACTTCAAATA CGTCACGAGG 481 TATATCATTT TCCGTTCCAT CAATTTTAGC AATCACGACA TGAGGATCTT TTTCAAATGA 541 GATAGCTATT TCATCCAAGA CGGGAGCAAA CTCCTCACAA TATCTACACC CAAGTCGATA 601 GAACTCCAAC AGTACATCTT TTCCCGAATT AAACACCATA TCGTCAAGAG TCTCTGCAAC 661 CACCACCTTC ACAGTTTCAT TGTTAAATTC TGGAATTGGC TGTGACTTCA AGTATGGCTT 721 CAACTTTCTG TCCTTACAAT CCTTCAACCA AGATGCAAGG TTATCGGGTT GTACATGTCG 781 CTGAACGTAT TTTGTGCTAC CCATGGTAAG TACGAAGAAT AAAGGTGTCT GATCA Predicted gene structure (within gDNA segment 66292 to 56684): Exon 1 57600 57322 ( 279 n); cDNA 2 275 ( 274 n); score: 0.796 MATCH C08HBa0294K15.1- SGN-E546219+ 0.796 279 0.334 C PGS_C08HBa0294K15.1-_SGN-E546219+ (57600 57322) Alignment (genomic DNA sequence = upper lines): TTAAAACTCA TTAACGAAAT CAAT--AATT AACTTCTAAA ACTCAAAACT TATCATTATC 57543 || | | |||||| ||| |||| ||| |||||||||| | || | | | | |||| TTTTTTTTTA TTAACGTAAT CAATTAAATA AACTTCTAAA GTTTAATA-T T-T-ATTAAT 58 CCCAAAATCT GGAAGTCATC ATCACAAGAA CATCTATCCT CAAATTACTA AATCTAAGAG 57483 |||||||||| |||||||||| | ||| || |||||||||| | | || |||||||||| CCCAAAATCT GGAAGTCATC ACATCAATAA CATCTATCCT C-----AGTA AATCTAAGAG 113 TATCTAAGAA GCTAAAATAA GTAAAA-G-A GATAGTCCAT GTCCGAACTT CAAGACATCA 57425 ||| |||||| |||||||||| |||||| | | | |||||| |||||||||| |||||||||| TATTTAAGAA GCTAAAATAA GTAAAAAGAA AACGGTCCAT GTCCGAACTT CAAGACATCA 173 AGACGCGAAG GAAAGAATCC AGTCCGAGCT AGGAACAATA TCTCACCCTG AAATCTGATT 57365 ||||| || | || ||||||| |||||||||| ||||| |||| ||||||||| |||||||| | AGACGTGAGG GAGAGAATCC AGTCCGAGCT AGGAATAATA GCTCACCCTG AAATCTGA-T 232 ATGCTGAAGT CTGGCTAGAG TTGCGGTTGA GTCAAAGTCG ATG 57322 ||||| || |||||||||| ||| | | ||| |||| | ||| GTGCTGGAGA CTGGCTAGAG TTGAAGGCGG GTCGAAGTTG ATG 275 hqPGS_C08HBa0294K15.1-_SGN-E546219+ (57600 57322) ******************************************************************************** EST sequence 12 -strand 299 n (File: SGN-E373117-) 1 TTTTTTTTTT TCTAAAAACT CAACAACTAT TATTATCCCC AAAATCTGGA AGTCATCATC 61 ACAAGAACAT CTACTTCAAA TTACTAAATC TAAGAGTATC TAAGAAGCTA AAATACATAA 121 ACAGCTAGTC CATGCCGGAA CTTCAAGGCA TCAAGACATG AAGAAGAAGA TCCAGTCCAA 181 GCTAGAAGCG TTAGCTCACC CTGAAATCCG ATGTAATGAA GACTGGCTAG AGTTGCGGTT 241 GAGTTGAAGA CGACGGTACG TTTGCCAAAA TTACGACAGT ATTTGGACAA GCTAGAAGA Predicted gene structure (within gDNA segment 58468 to 55024): Exon 1 57574 57324 ( 251 n); cDNA 5 253 ( 249 n); score: 0.839 MATCH C08HBa0294K15.1- SGN-E373117- 0.839 251 0.839 C PGS_C08HBa0294K15.1-_SGN-E373117- (57574 57324) Alignment (genomic DNA sequence = upper lines): TTAACTTCTA A-AACTCAAA ACTTATCATT ATCCCCAAAA TCTGGAAGTC ATCATCACAA 57516 || ||||| | ||||||| | ||| ||| |||||||||| |||||||||| |||||||||| TTTTTTTCTA AAAACTCAAC AACTATTATT ATCCCCAAAA TCTGGAAGTC ATCATCACAA 64 GAACATCTAT CCTCAAATTA CTAAATCTAA GAGTATCTAA GAAGCTAAAA TAAGTAAAAG 57456 ||||||||| | |||||||| |||||||||| |||||||||| |||||||||| || | ||| GAACATCTA- CTTCAAATTA CTAAATCTAA GAGTATCTAA GAAGCTAAAA TACAT-AAAC 122 AGATAGTCCA TGTCCGAACT TCAAGACATC AAGACGCGAA GGAAAGAATC CAGTCCGAGC 57396 || ||||||| || | ||||| ||||| |||| ||||| ||| | | | ||| |||||| ||| AGCTAGTCCA TGCCGGAACT TCAAGGCATC AAGACATGAA GAAGAAGATC CAGTCCAAGC 182 TAGGAACAAT ATCTCACCCT GAAATCTGAT TATGCTGAAG TCTGGCTAGA GTTGCGGTTG 57336 ||| | | | | |||||||| |||||| || | | ||||| ||||||||| |||||||||| TAGAAGCGTT AGCTCACCCT GAAATCCGA- TGTAATGAAG ACTGGCTAGA GTTGCGGTTG 241 AGTCAAAGTC GA 57324 ||| ||| | || AGTTGAAGAC GA 253 hqPGS_C08HBa0294K15.1-_SGN-E373117- (57574 57324) ******************************************************************************** EST sequence 99 +strand 299 n (File: SGN-E373116+) 1 TTTTTTTTTT CTAAAAACTC AACAACTATT ATTATCCCCA AAATCTGGAA GTCATCATCA 61 CAAGAACATC TACTTCAAAT TACTAAATCT AAGAGTATCT AAGAAGCTAA AATACATAAA 121 CAGCTAGTCC ATGCCGGAAC TTCAAGGCAT CAAGACATGA AGAAGAAGAT CCAGTCCAAG 181 CTAGAAGCGT TAGCTCACCC TGAAATCCGA TGTAATGAAG ACTGGCTAGA GTTGCGGTTG 241 AGTTGAAGAC GACGGTACGT TTGCCAAAAT TACGACAGTA TTTGGACAAG CTAGAAGAG Predicted gene structure (within gDNA segment 58448 to 55004): Exon 1 57574 57324 ( 251 n); cDNA 4 252 ( 249 n); score: 0.839 MATCH C08HBa0294K15.1- SGN-E373116+ 0.839 251 0.839 C PGS_C08HBa0294K15.1-_SGN-E373116+ (57574 57324) Alignment (genomic DNA sequence = upper lines): TTAACTTCTA AAA-CTCAAA ACTTATCATT ATCCCCAAAA TCTGGAAGTC ATCATCACAA 57516 || ||||| ||| ||||| | ||| ||| |||||||||| |||||||||| |||||||||| TTTTTTTCTA AAAACTCAAC AACTATTATT ATCCCCAAAA TCTGGAAGTC ATCATCACAA 63 GAACATCTAT CCTCAAATTA CTAAATCTAA GAGTATCTAA GAAGCTAAAA TAAGTAAAAG 57456 ||||||||| | |||||||| |||||||||| |||||||||| |||||||||| || | ||| GAACATCTA- CTTCAAATTA CTAAATCTAA GAGTATCTAA GAAGCTAAAA TACAT-AAAC 121 AGATAGTCCA TGTCCGAACT TCAAGACATC AAGACGCGAA GGAAAGAATC CAGTCCGAGC 57396 || ||||||| || | ||||| ||||| |||| ||||| ||| | | | ||| |||||| ||| AGCTAGTCCA TGCCGGAACT TCAAGGCATC AAGACATGAA GAAGAAGATC CAGTCCAAGC 181 TAGGAACAAT ATCTCACCCT GAAATCTGAT TATGCTGAAG TCTGGCTAGA GTTGCGGTTG 57336 ||| | | | | |||||||| |||||| || | | ||||| ||||||||| |||||||||| TAGAAGCGTT AGCTCACCCT GAAATCCGA- TGTAATGAAG ACTGGCTAGA GTTGCGGTTG 240 AGTCAAAGTC GA 57324 ||| ||| | || AGTTGAAGAC GA 252 hqPGS_C08HBa0294K15.1-_SGN-E373116+ (57574 57324) ******************************************************************************** EST sequence 38 -strand 219 n (File: SGN-E298638-) 1 TTTTTTTTTT TCTAAAAACT CAACAACTAT TATTATCCCC AAAATCTGGC AGTCATCATC 61 ACAAGAACAT GTACTTCAAA TTACTAAATC TAAGAGTATC TAAGAAGCTA AAATACATAA 121 ACAGCTAGTC CATGCCGGAA CTTCAAGGCA TCAAGACATG AAGAAGAAGA TCCAGTCCAA 181 GCTAGAAGCG TTAGCTCACC CTGAAATCCG ATGTAATGA Predicted gene structure (within gDNA segment 58468 to 55824): Exon 1 57574 57358 ( 217 n); cDNA 5 219 ( 215 n); score: 0.823 MATCH C08HBa0294K15.1- SGN-E298638- 0.823 217 0.991 C PGS_C08HBa0294K15.1-_SGN-E298638- (57574 57358) Alignment (genomic DNA sequence = upper lines): TTAACTTCTA A-AACTCAAA ACTTATCATT ATCCCCAAAA TCTGGAAGTC ATCATCACAA 57516 || ||||| | ||||||| | ||| ||| |||||||||| ||||| |||| |||||||||| TTTTTTTCTA AAAACTCAAC AACTATTATT ATCCCCAAAA TCTGGCAGTC ATCATCACAA 64 GAACATCTAT CCTCAAATTA CTAAATCTAA GAGTATCTAA GAAGCTAAAA TAAGTAAAAG 57456 |||||| || | |||||||| |||||||||| |||||||||| |||||||||| || | ||| GAACATGTA- CTTCAAATTA CTAAATCTAA GAGTATCTAA GAAGCTAAAA TACAT-AAAC 122 AGATAGTCCA TGTCCGAACT TCAAGACATC AAGACGCGAA GGAAAGAATC CAGTCCGAGC 57396 || ||||||| || | ||||| ||||| |||| ||||| ||| | | | ||| |||||| ||| AGCTAGTCCA TGCCGGAACT TCAAGGCATC AAGACATGAA GAAGAAGATC CAGTCCAAGC 182 TAGGAACAAT ATCTCACCCT GAAATCTGAT TATGCTGA 57358 ||| | | | | |||||||| |||||| || | | ||| TAGAAGCGTT AGCTCACCCT GAAATCCGA- TGTAATGA 219 hqPGS_C08HBa0294K15.1-_SGN-E298638- (57574 57358) ******************************************************************************** EST sequence 18 -strand 402 n (File: SGN-E352844-) 1 TTTTTTTTAT AAAAACCAAT TCAATAACTA TTATTTCCCA AAATCTGGAA GTTATCATCA 61 CAAGAACATC TACTTCGAAT TACTAAATCT AAGAGTATCT AAGAAGCTAA AATACATAAA 121 CAGCTAGTCC ATGCCGGAAC TTCAAGGCAT CAAGACATGA AGAAGAAGAT CCAGTCCAAG 181 CTAGAAGCTT TGTTTTATCG AAAAAAGGTG ATTTTTCGAA AAGAGTTTGT TTTATTTTAA 241 AGTATTTTTC GACTTTAGGA GTCGCCACTT AATTTTTAAG AAAAATCAAG AAAACTCATT 301 CTCAAAACAA TTTAAACAGA AAAGTCGTTT TGAAAATATT TTTTAGGATT CGGGATTCTT 361 ATTAGCGTCT TAGGAAGGTG TTTAAGGCAC CTAAGACACT CC Predicted gene structure (within gDNA segment 58512 to 53984): Exon 1 57542 57400 ( 143 n); cDNA 37 177 ( 141 n); score: 0.874 MATCH C08HBa0294K15.1- SGN-E352844- 0.874 143 0.356 C PGS_C08HBa0294K15.1-_SGN-E352844- (57542 57400) Alignment (genomic DNA sequence = upper lines): CCCAAAATCT GGAAGTCATC ATCACAAGAA CATCTATCCT CAAATTACTA AATCTAAGAG 57483 |||||||||| |||||| ||| |||||||||| |||||| | | | |||||||| |||||||||| CCCAAAATCT GGAAGTTATC ATCACAAGAA CATCTA-CTT CGAATTACTA AATCTAAGAG 95 TATCTAAGAA GCTAAAATAA GTAAAAGAGA TAGTCCATGT CCGAACTTCA AGACATCAAG 57423 |||||||||| ||||||||| | ||| || ||||||||| | |||||||| || ||||||| TATCTAAGAA GCTAAAATAC AT-AAACAGC TAGTCCATGC CGGAACTTCA AGGCATCAAG 154 ACGCGAAGGA AAGAATCCAG TCC 57400 || |||| | | |||||| ||| ACATGAAGAA GAAGATCCAG TCC 177 hqPGS_C08HBa0294K15.1-_SGN-E352844- (57542 57400) ******************************************************************************** EST sequence 48 -strand 286 n (File: SGN-E355114-) 1 CCACAGCCCC AGTGGCTGGC TCAGTTGTTT CTTGTCTGGC CGGTGTTGGT GTTGACGTGG 61 TCGTTGCTCT AGTTCTAACC ATCTGCAAAA GAGAGTGAAG ATGGTCAGAT ACCAATTTGT 121 ATCGCCTAGA TACCAATTGG ACTCAAGTAG TAGCACGAAA GAAAGAATGA AAGGGTGAAA 181 TTTTCCTAAA GTCTTATAGC CTCTCAAAGA AAAGTAAAGG CGTCCCCCTA CCGTTCCTAA 241 AGACTCTACT AGACCTGTTC TTGTGTGATG AGACCAACGA ACCTAA Predicted gene structure (within gDNA segment 58680 to 57135): Exon 1 58014 57735 ( 280 n); cDNA 3 286 ( 284 n); score: 0.882 MATCH C08HBa0294K15.1- SGN-E355114- 0.882 280 0.979 C PGS_C08HBa0294K15.1-_SGN-E355114- (58014 57735) Alignment (genomic DNA sequence = upper lines): ACAACCCCAG TGGCTGGCTC AGACGCATCT TGTCTTGCCG GTGTTGGTGT TGGCGCAGTT 57955 ||| |||||| |||||||||| || | ||| ||||| |||| |||||||||| || || || ACAGCCCCAG TGGCTGGCTC AGTTGTTTCT TGTCTGGCCG GTGTTGGTGT TGACGTGGTC 62 GTTGCTCTAG TTCTAACCAT CTGTGAAATA GAGTGAAGAT GGTCAGATAC CAATTTGTAT 57895 |||||||||| |||||||||| ||| ||| | |||||||||| |||||||||| |||||||||| GTTGCTCTAG TTCTAACCAT CTGCAAAAGA GAGTGAAGAT GGTCAGATAC CAATTTGTAT 122 CACCTAGATA CCAATTGGAT CCAAGTAAAA GCACGAAAG- AAG---GAAA GAATGGAATT 57839 | |||||||| ||||||||| |||||| | ||||||||| ||| |||| | || |||| CGCCTAGATA CCAATTGGAC TCAAGTAGTA GCACGAAAGA AAGAATGAAA GGGTGAAATT 182 TTCCTAAAGT CTTATAGCCT CTCAAAGAAA AGTAAAGGCG TCCCCCTACC GTTCCTCAAG 57779 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| TTCCTAAAGT CTTATAGCCT CTCAAAGAAA AGTAAAGGCG TCCCCCTACC GTTCCTAAAG 242 ACTCTACTAG ACTTGTTCTT GTGTGATGAG ACCAACGAAC CTAA 57735 |||||||||| || ||||||| |||||||||| |||||||||| |||| ACTCTACTAG ACCTGTTCTT GTGTGATGAG ACCAACGAAC CTAA 286 hqPGS_C08HBa0294K15.1-_SGN-E355114- (58014 57735) ******************************************************************************** EST sequence 57 -strand 282 n (File: SGN-E368761-) 1 CCTCCAAGCT CGGACACTCC TTGGGAACTC TGGGGTCAGA ATTTGGCCGA TAGGTTTAAG 61 ATTGATGTAC CATCTATTAT GTACTGTAAT AGTTTCTATG AATGCCATGT AGACTATTTA 121 ATACCCTGTT TCTTGTTGTT CTCCCCATCC TCCCCCTCTC TTACTAGCTC CTCAGTCGGT 181 GGAGGAGTCA CCGCCCTAGC ATCAGATGGA CTAGGTGCTC GTCCTCTTCC TCTAGAGGAC 241 GTTCTCTCAC GACCTCTACC ACGGCCTCTT GCCGCTGTTC TC Predicted gene structure (within gDNA segment 60427 to 57343): Exon 1 58174 58026 ( 149 n); cDNA 133 280 ( 148 n); score: 0.879 MATCH C08HBa0294K15.1- SGN-E368761- 0.879 149 0.528 C PGS_C08HBa0294K15.1-_SGN-E368761- (58174 58026) Alignment (genomic DNA sequence = upper lines): TTGTTCATCC TCCCCTTCCT CACCCTCTCT TACTACTTCC TCAGTCGGTG GAGGAGTCAC 58115 ||||| | | ||||| |||| | |||||||| ||||| ||| |||||||||| |||||||||| TTGTT-GTTC TCCCCATCCT CCCCCTCTCT TACTAGCTCC TCAGTCGGTG GAGGAGTCAC 191 CGCCCTAGTA CTAGATGGGC CAGGTGCTTG TCCTCTTCCT CTAGAGGACG TCCTCCCGCG 58055 |||||||| | |||||| | ||||||| | |||||||||| |||||||||| | ||| | || CGCCCTAGCA TCAGATGGAC TAGGTGCTCG TCCTCTTCCT CTAGAGGACG TTCTCTCACG 251 ACCTCTACCA CGGCCTCTTG CCACTGCTC 58026 |||||||||| |||||||||| || ||| || ACCTCTACCA CGGCCTCTTG CCGCTGTTC 280 hqPGS_C08HBa0294K15.1-_SGN-E368761- (58174 58026) ******************************************************************************** EST sequence 128 +strand 694 n (File: SGN-E353359+) 1 TGTAGTCTAT GCACATTCAA AAACTGCCGA TCTTTACAAC AAAACCGGAG CACCCCAAGG 61 AGATGCACTT GGTCTAATGA AGCCTTTGTT CAATAACTCT TGAAGTTGTG CCTTTAACTC 121 TCTTAACTCT GCGGGAGCCA TTCTATAAGG GGGTATAAAA ATGGGGCGTG TGCCCGGTTC 181 GAGATCAATA CAGAAGTCAA TATCCCTATC CGGTGGCATA CCAGGATGAT CTGCAGGGAA 241 CACATCCATA AACTCACGAA CTACTGAAAC TGAGTCAATC GAAGGTACTT GGGTAGTGTT 301 ATCCTTGAGA TGTGCCAAGA AAGCTAAACA CCCTTTACTA ACCATTTTCT TAGCACGAAG 361 AAAGGAGATG ATACGCACCG GATTGGAAGT GTAGTCACCC TCCTACACTA ACAGATCTGT 421 CCCAGGCTTG GCTAACGTCA CGGTTTTAGC ATTACAATCC AAGATTGCAA AATTTGGAGA 481 AAGCCAAGTC ATACCCAGAA TTACATCGAA GTCAACCATT TCTTGCAAGG ATTTTGCCGT 541 AGCCGCTACC TGTAACGCTG AAATCCGCAA CTCTGACCTC AACCCTTTCA CAAAACGACG 601 AATCCTCTCT TGTGGACTGA AACAAAGTTG AGTGGCATAT CTGGATAGTG CACGAAACTT 661 AGCCTCATAT GCATTGACCT ACATCCTACC TTGC Predicted gene structure (within gDNA segment 61769 to 57229): Exon 1 60141 59666 ( 476 n); cDNA 48 523 ( 476 n); score: 0.891 Intron 1 59665 58888 ( 778 n); Pd: 0.000 (s: 0.98), Pa: 0.000 (s: 0.78) Exon 2 58887 58717 ( 171 n); cDNA 524 694 ( 171 n); score: 0.836 MATCH C08HBa0294K15.1- SGN-E353359+ 0.876 647 0.932 C PGS_C08HBa0294K15.1-_SGN-E353359+ (60141 59666,58887 58717) Alignment (genomic DNA sequence = upper lines): GAGTACCCCA AGGGGATGCA CTTGGTCTAA TAAAACCTTT CCCTAACAAC TCTTGAAGTT 60082 ||| |||||| ||| |||||| |||||||||| | || ||||| || ||| |||||||||| GAGCACCCCA AGGAGATGCA CTTGGTCTAA TGAAGCCTTT GTTCAATAAC TCTTGAAGTT 107 GGGCCTTTAA CTCTCTTAAC TCAGCGGGAG CCATTCTATA AGGGGGTATG GAAATGGGGC 60022 | |||||||| |||||||||| || ||||||| |||||||||| ||||||||| ||||||||| GTGCCTTTAA CTCTCTTAAC TCTGCGGGAG CCATTCTATA AGGGGGTATA AAAATGGGGC 167 GAGTACCCGG CTCCAGATCA ATACAGAAAT CAATATCTCT ATCTGGTGGC ATACCAGAAA 59962 | || ||||| || |||||| |||||||| | ||||||| || ||| |||||| ||||||| | GTGTGCCCGG TTCGAGATCA ATACAGAAGT CAATATCCCT ATCCGGTGGC ATACCAGGAT 227 GGTCTGCAGG AAACACATCC AAAAACTCAC GGACTATCGA AACCGACTCA ATTGAAGGTA 59902 | |||||||| ||||||||| | |||||||| | |||| || ||| || ||| || ||||||| GATCTGCAGG GAACACATCC ATAAACTCAC GAACTACTGA AACTGAGTCA ATCGAAGGTA 287 CTTGGGTAGT ATCATCCCTG AGGTGTGCCA AGAAAGCTAA ACACCCTTTA CTAACCATTC 59842 |||||||||| | |||| || || ||||||| |||||||||| |||||||||| ||||||||| CTTGGGTAGT GTTATCCTTG AGATGTGCCA AGAAAGCTAA ACACCCTTTA CTAACCATTT 347 TCTTAGCACG AAGAAATGAG ATGATACGAA CTGGAGTGGG AGTGTAGTCA CCCTCCCACA 59782 |||||||||| |||||| ||| |||||||| | | ||| ||| |||||||||| |||||| ||| TCTTAGCACG AAGAAAGGAG ATGATACGCA CCGGATTGGA AGTGTAGTCA CCCTCCTACA 407 CTAACGGATC TGTCTCAGGC TTGGCCAATG TCACAGTTTT GGCATTACAG TCTAAGATTG 59722 ||||| |||| |||| ||||| ||||| || | |||| ||||| |||||||| || ||||||| CTAACAGATC TGTCCCAGGC TTGGCTAACG TCACGGTTTT AGCATTACAA TCCAAGATTG 467 CAAAGTTTGG AGAAAGCCAA GTCATACCCA GAATTACATC GAAATCAACC ATTTCTAAGA 59662 |||| ||||| |||||||||| |||||||||| |||||||||| ||| |||||| |||||| CAAAATTTGG AGAAAGCCAA GTCATACCCA GAATTACATC GAAGTCAACC ATTTCT.... 523 TAACCAAGTC TACATGAGTA TTACTCCCCA TAAAAGTCAC AAGACAAGAC CTATACACCT 59602 .......... .......... .......... .......... .......... .......... 523 TTTCAACTAT CACAGACTCA CCCACCGGAG TAGAAACACG AATAGGCATG TCAAGCAATT 59542 .......... .......... .......... .......... .......... .......... 523 CACAATGTAA ATTAAGACCA GTAGCAAATG AGGAAGATAC ATATGAAAAT GTGGATCCAG 59482 .......... .......... .......... .......... .......... .......... 523 GATCAAATAA TACAGAAGCC ATGCAATCAC AAACCAAAAG ATTACCTGTG ATAACAACAT 59422 .......... .......... .......... .......... .......... .......... 523 CAGATGTCTC CGCTTCAGAC CTCCCAGGGA AAGCATAACA ATGGGCCCTA TCACCTGTCT 59362 .......... .......... .......... .......... .......... .......... 523 ATCCGTTGCC CCTACCATGT TGTGCTGCAG TCGCTCCGGC TTGTCCGCCA CCCCGGTTGA 59302 .......... .......... .......... .......... .......... .......... 523 TTTGTGTGAC CACCATTACC TCGGCCACCA TGTTCTCCAG AATAGCGGCC TCTTCCATGA 59242 .......... .......... .......... .......... .......... .......... 523 CCACCTCTAC CCCTGACTAT TGAAGGTCTG TAACTCTGTT TTGGACAATA TCTCTTAATA 59182 .......... .......... .......... .......... .......... .......... 523 TGTCCAATTT CCCCACATCC ATAACACTCT CTGGGTTCGA GCATAGGTCT CTGTGAGAAC 59122 .......... .......... .......... .......... .......... .......... 523 GACGGAGTCT GGGGATAACC TCCAAACTCA GAGAAATGTT GACCGGTCTG TGGACCCCCA 59062 .......... .......... .......... .......... .......... .......... 523 GCTACAGCCT GTAGTGAAGA CTGAATAGGT CGGGCTGGAT ACCCTCCTGA ACTCTGCCCT 59002 .......... .......... .......... .......... .......... .......... 523 CTGGAGTAAG AACTACTAAA CTCACCTCCC TTACGAAACT TCTTAGTTGT TGATGCCATG 58942 .......... .......... .......... .......... .......... .......... 523 GTGAAATCAT CTGGCTTCAC TCCCTCCACC TCTATCACAA AGTCTACCAC TTCCTAAAAG 58882 | ||| .......... .......... .......... .......... .......... ....TGCAAG 529 GATTTTGCTG CAGTAGATAC CTGTAAGGCT GGAATCTGCA AATCTGACCT CAATCCCTTC 58822 |||||||| | || | ||| |||||| ||| | |||| ||| | |||||||| ||| || ||| GATTTTGCCG TAGCCGCTAC CTGTAACGCT GAAATCCGCA ACTCTGACCT CAACCCTTTC 589 ACAAAATGGC GAATCCGCTC TTGTGGACTG AAGCAAAGCT GGGTGGCATA CCTAGATAAT 58762 |||||| | | |||||| ||| |||||||||| || ||||| | | |||||||| || |||| | ACAAAACGAC GAATCCTCTC TTGTGGACTG AAACAAAGTT GAGTGGCATA TCTGGATAGT 649 GCACGACACT TAGCCTCATA CGCAGTAACC GACATCCTGC CTTGC 58717 |||||| ||| |||||||||| ||| | ||| ||||||| | ||||| GCACGAAACT TAGCCTCATA TGCATTGACC TACATCCTAC CTTGC 694 hqPGS_C08HBa0294K15.1-_SGN-E353359+ (60141 59666,58887 58717) ******************************************************************************** EST sequence 116 +strand 763 n (File: SGN-E214046+) 1 ACGAATAGGC ATATCAAGAA ATTCACAATG TAAATTTAGA CCATTAGCAA ATGAGGAAGA 61 TACATAAGAA AACGTGGATC CAGGATCAAA CAATACGGAA GCCATGCAAT CACAAACAAG 121 AAGATTACCT GTGATGACAG CATCAGATGC CTCCGCTTTA GACCGCCCAG GGAAAGCGTA 181 ACAATGGGCC CTATAGTTTG TTTGTCCATT GCCCCTACCA TGTCGTGATG TAGTGGCCCC 241 AGTTTGTCCA TTACCTCTGC CGTTTTGGTG ACCACCATTG CCTCGACCAC CACGTCCTCC 301 AAAATAACGG CCTCTACCAT GACAACCTCT ACCTCTAACT ATTGGGGGTC TATAACTTGG 361 TCCGGGAAAA TTTCTCCTAA TATGTCCAAT CTCCCCACAT CCATAACATT CTCTAGAGTC 421 ACTCATAGGC CCCTCGGAGA AGTGTTGACC GGTCTGAGGT GGACCCCCAA CTACAGTTTG 481 TAGTGAAGAC TGAATGGGTC GAACTGAGTA ACCTCCAGAA CCTTGTCCTC TAGAGTAAGA 541 ACCCTTAAAC TCATCTCCCC TTTGAAACCT CATCGATGTC GATGTCGTGG TGAAGTCGTC 601 TGGTTTCACT CCTTCCACTT CTATCAAAAA GTCTACCACT TCTTGGAAGG ATTTTGCCGT 661 TGCCGCTACC TGTAAGGGCG AAATCCGCAA TTCTGACCTC AACCCCTTCA CAACCGGCGA 721 ATCCGCTCTT GAGGGACTGA ACAGAGTTGA GTGGCATATC TGG Predicted gene structure (within gDNA segment 60335 to 52378): Exon 1 59564 59130 ( 435 n); cDNA 1 434 ( 434 n); score: 0.839 Intron 1 59129 59094 ( 36 n); Pd: 0.000 (s: 0.80), Pa: 0.000 (s: 0.73) Exon 2 59093 58769 ( 325 n); cDNA 435 761 ( 327 n); score: 0.785 MATCH C08HBa0294K15.1- SGN-E214046+ 0.816 760 0.996 C PGS_C08HBa0294K15.1-_SGN-E214046+ (59564 59130,59093 58769) Alignment (genomic DNA sequence = upper lines): ACGAATAGGC ATGTCAAGCA ATTCACAATG TAAATTAAGA CCAGTAGCAA ATGAGGAAGA 59505 |||||||||| || ||||| | |||||||||| |||||| ||| ||| |||||| |||||||||| ACGAATAGGC ATATCAAGAA ATTCACAATG TAAATTTAGA CCATTAGCAA ATGAGGAAGA 60 TACATATGAA AATGTGGATC CAGGATCAAA TAATACAGAA GCCATGCAAT CACAAACCAA 59445 |||||| ||| || ||||||| |||||||||| ||||| ||| |||||||||| ||||||| | TACATAAGAA AACGTGGATC CAGGATCAAA CAATACGGAA GCCATGCAAT CACAAACAAG 120 AAGATTACCT GTGATAACAA CATCAGATGT CTCCGCTTCA GACCTCCCAG GGAAAGCATA 59385 |||||||||| ||||| ||| ||||||||| |||||||| | |||| ||||| ||||||| || AAGATTACCT GTGATGACAG CATCAGATGC CTCCGCTTTA GACCGCCCAG GGAAAGCGTA 180 ACAATGGGCC CTATCACCTG TCTATCCGTT GCCCCTACCA TGTTGTGCTG CAGTCGCTCC 59325 |||||||||| |||| || | | ||| || |||||||||| ||| ||| || ||| || || ACAATGGGCC CTATAGTTTG TTTGTCCATT GCCCCTACCA TGTCGTGATG TAGTGGCCCC 240 GGCTTGTCCG CCACCCCGGT TGATTTGTGT GACCACCATT ACCTCGGCCA CCATGTTCTC 59265 | |||||| ||| | | | |||| || |||||||||| ||||| ||| ||| || ||| AGTTTGTCCA TTACCTCTGC CGTTTTG-GT GACCACCATT GCCTCGACCA CCACGTCCTC 299 CAGAATAGCG GCCTCTTCCA TGACCACCTC TACCCCTGAC TATTGAAGGT CTGTAACTCT 59205 || |||| || |||||| ||| |||| ||||| |||| || || ||||| ||| || ||||| CAAAATAACG GCCTCTACCA TGACAACCTC TACCTCTAAC TATTGGGGGT CTATAACTTG 359 GTTTTGGACA ATATCTCTTA ATATGTCCAA TTTCCCCACA TCCATAACAC TCTCTGGGTT 59145 || ||| | || |||| || |||||||||| | |||||||| ||||||||| ||||| | | GTCCGGGAAA ATTTCTCCTA ATATGTCCAA TCTCCCCACA TCCATAACAT TCTCTAGAGT 419 CGAGCATAGG TCTCTGTGAG AACGACGGAG TCTGGGGATA ACCTCCAAAC TCAGAGAAAT 59085 | |||||| | || | ||||| | CACTCATAGG CCCCT..... .......... .......... .......... .CGGAGAAGT 443 GTTGACCGGT CT---GTGGA CCCCCAGCTA CAGCCTGTAG TGAAGACTGA ATAGGTCGGG 59028 |||||||||| || ||||| |||||| ||| ||| ||||| |||||||||| || ||||| GTTGACCGGT CTGAGGTGGA CCCCCAACTA CAGTTTGTAG TGAAGACTGA ATGGGTCGAA 503 CTGGATACCC TCCTGAACTC TGCCCTCTGG AGTAAGAACT ACTAAACTCA CCTCCCTTAC 58968 ||| || || ||| |||| || ||||| | ||||||||| |||||||| ||||| | CTGAGTAACC TCCAGAACCT TGTCCTCTAG AGTAAGAACC CTTAAACTCA TCTCCCCTTT 563 GAAACTTCTT AGTTGTTGAT GCCATGGTGA AATCATCTGG CTTCACTCCC TCCACCTCTA 58908 ||||| || | | ||| ||| | | |||||| | || ||||| |||||||| ||||| |||| GAAACCTCAT CGATGTCGAT GTCGTGGTGA AGTCGTCTGG TTTCACTCCT TCCACTTCTA 623 TCACAAAGTC TACCACTTCC TAAAAGGATT TTGCTGCAGT AGATACCTGT AAGGCTGGAA 58848 ||| |||||| ||||||||| | ||||||| |||| | | | ||||||| |||| | || TCAAAAAGTC TACCACTTCT TGGAAGGATT TTGCCGTTGC CGCTACCTGT AAGGGCGAAA 683 TCTGCAAATC TGACCTCAAT CCCTTCACAA AATGGCGAAT CCGCTCTTG- TGGACTGAAG 58789 || |||| || ||||||||| |||||||| | | ||||||| ||||||||| |||||||| TCCGCAATTC TGACCTCAAC CCCTTCAC-A ACCGGCGAAT CCGCTCTTGA GGGACTGAA- 741 CAAAGCTGGG TGGCATACCT 58769 || || || | ||||||| || CAGAGTTGAG TGGCATATCT 761 hqPGS_C08HBa0294K15.1-_SGN-E214046+ (59564 59130,59093 58769) ******************************************************************************** EST sequence 66 -strand 554 n (File: SGN-E329287-) 1 AGAATGATGC CCAAGTCATA CGTGGTGCCT CTGTTGGTTG ACACTCAACA TGTGACCGCC 61 ACCACATTTT GGCGTTCCCT TGAAACTGAT AAGTCACAAA CTCAACACCA AACCGTTCTA 121 CTATACCCAT CTTGTGTAGT AGCTCATGAC AGTCAACCAG AAAATCGTAG GCATCCTCAG 181 ATTCAACACC CTTGTAGACT TGAGGTTTCA ATTTCAAGAA CTTACTAAAA AGTTCATGCT 241 GATCATTTGT CATTATAGGC CCTGTAGTCA GACGGGGAAA CGTTCCTATT TCCAATGAGG 301 TATCGATGCG GGGAGTCACA GTAGGCGCAT GTTGTACCTC CGGAGCCTGA GGTGCTAGTG 361 CAGAAAACAC TGGAGGTGCT TGGCCTTGAT CAGATAACCC GCTAAGGTAA GCAAGAACCT 421 GATTGATCAT CTCTTGGGTA GGTTGGGGTG GCAATTCCTC ATTCTGCACT TGTTCATTCT 481 CCCCATCCTC ACCCTCTCTT ACCACTTCCT CAGTTGGTGG AGGTGTCACC GCCTTAGTAC 541 CAGATGGGCT AGGT Predicted gene structure (within gDNA segment 60756 to 57022): Exon 1 58643 58090 ( 554 n); cDNA 1 554 ( 554 n); score: 0.881 MATCH C08HBa0294K15.1- SGN-E329287- 0.881 554 1.000 C PGS_C08HBa0294K15.1-_SGN-E329287- (58643 58090) Alignment (genomic DNA sequence = upper lines): AGAATGATGC CCAAGTCATA GGCGGTGCCT GTGCTGGTTG ACACTCGACA TACGATCGCC 58584 |||||||||| |||||||||| | ||||||| || |||||| |||||| ||| | || |||| AGAATGATGC CCAAGTCATA CGTGGTGCCT CTGTTGGTTG ACACTCAACA TGTGACCGCC 60 ACCACATTTT GGAATTTCCC TGAAACTTAT AGGTTACAAA CTCAACACCG AATCGTTCCA 58524 |||||||||| || || || ||||||| || | || ||||| ||||||||| || ||||| | ACCACATTTT GGCGTTCCCT TGAAACTGAT AAGTCACAAA CTCAACACCA AACCGTTCTA 120 CTATGCCCAT CTTATGTAGA AACTCATGAC AATCAACCAC AAAATCATAG GCATCCTCAG 58464 |||| ||||| ||| ||||| | |||||||| | ||||||| |||||| ||| |||||||||| CTATACCCAT CTTGTGTAGT AGCTCATGAC AGTCAACCAG AAAATCGTAG GCATCCTCAG 180 ATTCAGCACC CTTGAAGACT GGAGGTTTCA ATTTCAAGAA CTTATTGAAA AGTTCGTGCT 58404 ||||| |||| |||| ||||| ||||||||| |||||||||| |||| | ||| ||||| |||| ATTCAACACC CTTGTAGACT TGAGGTTTCA ATTTCAAGAA CTTACTAAAA AGTTCATGCT 240 GATCACTTGT CATTATAGGT CCTGTAGTCA ATCGAGGAAA CGTGCCTATT TCCAATGAGG 58344 ||||| |||| ||||||||| |||||||||| || ||||| ||| |||||| |||||||||| GATCATTTGT CATTATAGGC CCTGTAGTCA GACGGGGAAA CGTTCCTATT TCCAATGAGG 300 CATCCATGCG GGGAGCCATA GCAGCTGCAT GTTGTACTCC CGAAACCTGA GGCGTTGGTG 58284 ||| ||||| ||||| || | | || |||| ||||||| | || | ||||| || | | ||| TATCGATGCG GGGAGTCACA GTAGGCGCAT GTTGTACCTC CGGAGCCTGA GGTGCTAGTG 360 CAGAAAACAC TGGAGGTGTC TGGCCTTGAT CAGATAACCC GCTAAGATAA GCAAGAACCT 58224 |||||||||| |||||||| |||||||||| |||||||||| |||||| ||| |||||||||| CAGAAAACAC TGGAGGTGCT TGGCCTTGAT CAGATAACCC GCTAAGGTAA GCAAGAACCT 420 GGTTAATCAT CTCTGGGGTA GGTTGGGGTG GTAATTCCTC ATTCTGCACT TGTTCATCCT 58164 | || ||||| |||| ||||| |||||||||| | |||||||| |||||||||| ||||||| || GATTGATCAT CTCTTGGGTA GGTTGGGGTG GCAATTCCTC ATTCTGCACT TGTTCATTCT 480 CCCCTTCCTC ACCCTCTCTT ACTACTTCCT CAGTCGGTGG AGGAGTCACC GCCCTAGTAC 58104 |||| ||||| |||||||||| || ||||||| |||| ||||| ||| |||||| ||| |||||| CCCCATCCTC ACCCTCTCTT ACCACTTCCT CAGTTGGTGG AGGTGTCACC GCCTTAGTAC 540 TAGATGGGCC AGGT 58090 |||||||| |||| CAGATGGGCT AGGT 554 hqPGS_C08HBa0294K15.1-_SGN-E329287- (58643 58090) ******************************************************************************** EST sequence 83 +strand 716 n (File: SGN-E577713+) 1 CGGTGGATAC CTAGGCACCC AGAGACGAGG AAGGGCGTAG TAATCGACGA AATGCTTCGG 61 GGAGTTGAAA ATAAGCATAG ATCCGGAGAT TCCCGAATAG GGCAACCTTT CGAACTGCTG 121 CTGAATCCAT GGGCAGGCAA GAGACAACCT GGCGAACTGA AACATCTTAG TAGCCAGAGG 181 AAAAGAAAGC AAATAAGGAA GATACATAAG AAAACGTGGA TCCAGGATCA AACAATACAG 241 AAGCCATGCA ATCACAAACC AGAAGATTAC CTGTGATGAC AACATCAGAT GCCTCCGCTT 301 CACACCGCCC AGGGAAAGCG TAACAATGGG CCCTATCGTT CGTCTGTCCG TTGCCCCTAC 361 CATGTTGTGA TGTAGTGGCC CAAGTTTGCC CATTACCTCT GCCGTTTTGG TGACCACCAT 421 TACCTCGACC ACCACGTCCT CCAGAATAAC GGCCTCTACC ATGACCACCT CTACCTCTAG 481 CTATTGGGGG TCTATAACTT TGTCTGGGAC AATTTTTCCT AATATGTCCA ATCTCCCCAC 541 ATCCATACCA TTCTCTGGAG TCAATCCTAG GCCCCTCGGA GAAGTGTTGA CCGGTCTGAG 601 GTGGTCCCCC AACTACAGTC TGTAGTGAAG ACTCAATTGG TCGGACTGAG TAACTTCCCG 661 AACCCTGTCC TCTAGTGTAA GAACCATTAA ACTCACCTCC CTTTCGAAGC CTTTTT Predicted gene structure (within gDNA segment 62241 to 55258): Exon 1 59586 59557 ( 30 n); cDNA 156 185 ( 30 n); score: 0.633 Intron 1 59556 59522 ( 35 n); Pd: 0.922 (s: 0), Pa: 0.000 (s: 0.88) Exon 2 59521 59130 ( 392 n); cDNA 186 576 ( 391 n); score: 0.844 Intron 2 59129 59094 ( 36 n); Pd: 0.000 (s: 0.80), Pa: 0.000 (s: 0.73) Exon 3 59093 58958 ( 136 n); cDNA 577 715 ( 139 n); score: 0.776 MATCH C08HBa0294K15.1- SGN-E577713+ 0.827 558 0.779 C PGS_C08HBa0294K15.1-_SGN-E577713+ (59586 59557,59521 59130,59093 58958) Alignment (genomic DNA sequence = upper lines): ACTCACCCAC CGGAGTAGAA ACACGAATAG GCATGTCAAG CAATTCACAA TGTAAATTAA 59527 ||| | || | ||||| | | ||| || ACTGAAACAT CTTAGTAGCC AGAGGAAAAG .......... .......... .......... 185 GACCAGTAGC AAATGAGGAA GATACATATG AAAATGTGGA TCCAGGATCA AATAATACAG 59467 ||| |||| ||||| |||||||| | |||| ||||| |||||||||| || ||||||| .....AAAGC AAATAAGGAA GATACATAAG AAAACGTGGA TCCAGGATCA AACAATACAG 240 AAGCCATGCA ATCACAAACC AAAAGATTAC CTGTGATAAC AACATCAGAT GTCTCCGCTT 59407 |||||||||| |||||||||| | |||||||| ||||||| || |||||||||| | |||||||| AAGCCATGCA ATCACAAACC AGAAGATTAC CTGTGATGAC AACATCAGAT GCCTCCGCTT 300 CAGACCTCCC AGGGAAAGCA TAACAATGGG CCCTATCACC TGTCTATCCG TTGCCCCTAC 59347 || ||| ||| ||||||||| |||||||||| ||||||| |||| |||| |||||||||| CACACCGCCC AGGGAAAGCG TAACAATGGG CCCTATCGTT CGTCTGTCCG TTGCCCCTAC 360 CATGTTGTGC TGCAGTCGCT CCGGCTTGTC CGCCACCCCG GTTGATTTGT GTGACCACCA 59287 ||||||||| || ||| || | | ||| | | ||| | | | |||| |||||||||| CATGTTGTGA TGTAGTGGCC CAAGTTTGCC CATTACCTCT GCCGTTTTG- GTGACCACCA 419 TTACCTCGGC CACCATGTTC TCCAGAATAG CGGCCTCTTC CATGACCACC TCTACCCCTG 59227 |||||||| | ||||| || | ||||||||| |||||||| | |||||||||| |||||| || TTACCTCGAC CACCACGTCC TCCAGAATAA CGGCCTCTAC CATGACCACC TCTACCTCTA 479 ACTATTGAAG GTCTGTAACT CTGTTTTGGA CAATATCTCT TAATATGTCC AATTTCCCCA 59167 |||||| | |||| ||||| ||| | ||| |||| | || |||||||||| ||| |||||| GCTATTGGGG GTCTATAACT TTGTCTGGGA CAATTTTTCC TAATATGTCC AATCTCCCCA 539 CATCCATAAC ACTCTCTGGG TTCGAGCATA GGTCTCTGTG AGAACGACGG AGTCTGGGGA 59107 |||||||| | | ||||||| || | | || || | || CATCCATACC ATTCTCTGGA GTCAATCCTA GGCCCCT... .......... .......... 576 TAACCTCCAA ACTCAGAGAA ATGTTGACCG GTCT---GTG GACCCCCAGC TACAGCCTGT 59050 | ||||| ||||||||| |||| ||| | |||||| | ||||| |||| .......... ...CGGAGAA GTGTTGACCG GTCTGAGGTG GTCCCCCAAC TACAGTCTGT 623 AGTGAAGACT GAATAGGTCG GGCTGGATAC CCTCCTGAAC TCTGCCCTCT GGAGTAAGAA 58990 |||||||||| ||| ||||| | ||| || | ||| |||| ||| ||||| | ||||||| AGTGAAGACT CAATTGGTCG GACTGAGTAA CTTCCCGAAC CCTGTCCTCT AGTGTAAGAA 683 CTACTAAACT CACCTCCCTT ACGAAACTTC TT 58958 | | |||||| |||||||||| |||| | | || CCATTAAACT CACCTCCCTT TCGAAGCCTT TT 715 hqPGS_C08HBa0294K15.1-_SGN-E577713+ (59586 59557,59521 59130,59093 58958) ******************************************************************************** EST sequence 120 +strand 559 n (File: SGN-E244046+) 1 AAACACGAAT AGGCATATCA AGTAATTCAC AATGTAAAGT TAGACCATTA GCAAATGAGG 61 AAGATACATA AGAAAATGTG GATCCAGGAT CAAACAATAC AGAAGCCATG CAATCACAAA 121 CCAAAAGATT ACCTGTGATG ACAACATCAG ATTCCTCCGC TTCAGACCGC CCAGGGAAAG 181 CGTAACAATG GGCCCTATCA TTCTTATGTC TGTTGCCCCT ACCATGTTGT GATGTAGTGG 241 CTCCAGTTTG CCCATCACCT CGGCCGTTTT GGTGACCACC ATTTCCTCGA CCGCCACGTC 301 CTCCAGAATA ACGGACTCTG CCATGACCAC CTCTACCTCT AACCTTTGGA GGTCTGTAAC 361 TCTGTTTTGG ACAATATCTC TTAATATGTC CAATCTCCCC ACACCCATAG CACTCTCTGG 421 GTTCATGCAT AAGTCTCTCA GAGAAGTGTT GACCGGTCGA AGGTGGACCC CCAACTACAG 481 TCTGTAGTGA AGACTGAATT GGTCGGACTG AGTAACTTCC CGAACCCTGT CCTCTAGTGT 541 AAGCACCATT AAACTCACC Predicted gene structure (within gDNA segment 60600 to 56914): Exon 1 59568 59130 ( 439 n); cDNA 1 438 ( 438 n); score: 0.884 Intron 1 59129 59094 ( 36 n); Pd: 0.000 (s: 0.88), Pa: 0.000 (s: 0.76) Exon 2 59093 58976 ( 118 n); cDNA 439 559 ( 121 n); score: 0.784 MATCH C08HBa0294K15.1- SGN-E244046+ 0.863 557 0.996 C PGS_C08HBa0294K15.1-_SGN-E244046+ (59568 59130,59093 58976) Alignment (genomic DNA sequence = upper lines): AAACACGAAT AGGCATGTCA AGCAATTCAC AATGTAAATT AAGACCAGTA GCAAATGAGG 59509 |||||||||| |||||| ||| || ||||||| |||||||| | |||||| || |||||||||| AAACACGAAT AGGCATATCA AGTAATTCAC AATGTAAAGT TAGACCATTA GCAAATGAGG 60 AAGATACATA TGAAAATGTG GATCCAGGAT CAAATAATAC AGAAGCCATG CAATCACAAA 59449 |||||||||| ||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| AAGATACATA AGAAAATGTG GATCCAGGAT CAAACAATAC AGAAGCCATG CAATCACAAA 120 CCAAAAGATT ACCTGTGATA ACAACATCAG ATGTCTCCGC TTCAGACCTC CCAGGGAAAG 59389 |||||||||| ||||||||| |||||||||| || |||||| |||||||| | |||||||||| CCAAAAGATT ACCTGTGATG ACAACATCAG ATTCCTCCGC TTCAGACCGC CCAGGGAAAG 180 CATAACAATG GGCCCTATCA CCTGTCTATC CGTTGCCCCT ACCATGTTGT GCTGCAGTCG 59329 | |||||||| |||||||||| | | || ||||||||| |||||||||| | || ||| | CGTAACAATG GGCCCTATCA TTCTTATGTC TGTTGCCCCT ACCATGTTGT GATGTAGTGG 240 CTCCGGCTTG TCCGCCACCC CGGTTGATTT GTGTGACCAC CATTACCTCG GCCACCATGT 59269 |||| | ||| || |||| ||| | ||| | |||||||| |||| ||||| || ||| || CTCCAGTTTG CCCATCACCT CGGCCGTTTT G-GTGACCAC CATTTCCTCG ACCGCCACGT 299 TCTCCAGAAT AGCGGCCTCT TCCATGACCA CCTCTACCCC TGACTATTGA AGGTCTGTAA 59209 ||||||||| | ||| |||| ||||||||| |||||||| | | || ||| |||||||||| CCTCCAGAAT AACGGACTCT GCCATGACCA CCTCTACCTC TAACCTTTGG AGGTCTGTAA 359 CTCTGTTTTG GACAATATCT CTTAATATGT CCAATTTCCC CACATCCATA ACACTCTCTG 59149 |||||||||| |||||||||| |||||||||| ||||| |||| |||| ||||| ||||||||| CTCTGTTTTG GACAATATCT CTTAATATGT CCAATCTCCC CACACCCATA GCACTCTCTG 419 GGTTCGAGCA TAGGTCTCTG TGAGAACGAC GGAGTCTGGG GATAACCTCC AAACTCAGAG 59089 ||||| ||| || |||||| ||||| GGTTCATGCA TAAGTCTCT. .......... .......... .......... .....CAGAG 443 AAATGTTGAC CGGTC---TG TGGACCCCCA GCTACAGCCT GTAGTGAAGA CTGAATAGGT 59032 || ||||||| ||||| | |||||||||| |||||| || |||||||||| |||||| ||| AAGTGTTGAC CGGTCGAAGG TGGACCCCCA ACTACAGTCT GTAGTGAAGA CTGAATTGGT 503 CGGGCTGGAT ACCCTCCTGA ACTCTGCCCT CTGGAGTAAG AACTACTAAA CTCACC 58976 ||| ||| | | | ||| || || ||| ||| || | ||||| || | |||| |||||| CGGACTGAGT AACTTCCCGA ACCCTGTCCT CTAGTGTAAG CACCATTAAA CTCACC 559 hqPGS_C08HBa0294K15.1-_SGN-E244046+ (59568 59130,59093 58976) ******************************************************************************** EST sequence 143 +strand 720 n (File: SGN-E356614+) 1 GCGAATCCGC TCTTGAGGAC TGAAACAGAG TTGAGTGGCA TATCTGGATA GTGCACGAAA 61 CTTAGCCTCA TAAGCATTAA CTGACACCCT ACCTTGCTCT AGGCTCAAGA ACTCATCCCT 121 TTTCTTATCC CTCAAAGTCC GGGGGATATA CTTCTCCATA AACAAACTAT AGAATGAGGC 181 CCAAGTCATA GGTGATGCCT CTATTGGTTG ACACTCGATA TGTGACCGCC ACCACATTTG 241 GGCGTTCCCT TGAAACTGAT AAGTCACAAA CTCCACACCA AACCGTTCTA CTATACCCAT 301 CTTGTGTAGT AGCTCGTGAC AGTCAACCAG AAAATCATAA GCATCCTCCG ATTCAGCACC 361 CTTGAAGACC GGAGGTTTCA ATTTCAAGAA CTTACTGAAA AGTTCATGCT GATCATTTGT 421 CATTATAGGG ACAGTAGTCA AACGTGGAAA TGTGCCTATG TCCAATGGAA CATCCATGCG 481 GGGAGCCATA GTAGCCGCAT GTTGTACTTC TGAAACCGGA GGTGTTGGCG CAGAAAACAC 541 TGGAGGTGCT TGACCTTGAT CAGATAACCC GCTAAGATAA GCCAGAACCT GATTGATCAT 601 CTCTGGGGTA GGTTGGGGTG GCATTTCCTC ATTTTGCACT TGNTCAGTTT CCCCATCCCT 661 CCCTTTCTCT ATTACTTCCT CAGTCAGTGG AAGAGTCACT GCCCTAGTAT CAGATGGGCT Predicted gene structure (within gDNA segment 62554 to 56593): Exon 1 58813 58095 ( 719 n); cDNA 1 719 ( 719 n); score: 0.862 MATCH C08HBa0294K15.1- SGN-E356614+ 0.862 719 0.999 C PGS_C08HBa0294K15.1-_SGN-E356614+ (58813 58095) Alignment (genomic DNA sequence = upper lines): GCGAATCCGC TCTTGTGGAC TGAAGCAAAG CTGGGTGGCA TACCTAGATA ATGCACGACA 58754 |||||||||| ||||| |||| |||| || || || |||||| || || |||| ||||||| | GCGAATCCGC TCTTGAGGAC TGAAACAGAG TTGAGTGGCA TATCTGGATA GTGCACGAAA 60 CTTAGCCTCA TACGCAGTAA CCGACATCCT GCCTTGCTCT AGGCTCAAGA ACTCATCTCT 58694 |||||||||| || ||| ||| | |||| ||| ||||||||| |||||||||| ||||||| || CTTAGCCTCA TAAGCATTAA CTGACACCCT ACCTTGCTCT AGGCTCAAGA ACTCATCCCT 120 ACTCCTATCC CTCTAAGTCC GGGGTATATA CTTCTCCATA AACAAGCTAG AGAATGATGC 58634 || ||||| ||| |||||| |||| ||||| |||||||||| ||||| ||| ||||||| || TTTCTTATCC CTCAAAGTCC GGGGGATATA CTTCTCCATA AACAAACTAT AGAATGAGGC 180 CCAAGTCATA GGCGGTGCCT GTGCTGGTTG ACACTCGACA TACGATCGCC ACCACATTTT 58574 |||||||||| || | ||||| | |||||| |||||||| | | || |||| ||||||||| CCAAGTCATA GGTGATGCCT CTATTGGTTG ACACTCGATA TGTGACCGCC ACCACATTTG 240 GGAATTTCCC TGAAACTTAT AGGTTACAAA CTCAACACCG AATCGTTCCA CTATGCCCAT 58514 || || || ||||||| || | || ||||| ||| ||||| || ||||| | |||| ||||| GGCGTTCCCT TGAAACTGAT AAGTCACAAA CTCCACACCA AACCGTTCTA CTATACCCAT 300 CTTATGTAGA AACTCATGAC AATCAACCAC AAAATCATAG GCATCCTCAG ATTCAGCACC 58454 ||| ||||| | ||| |||| | ||||||| ||||||||| |||||||| | |||||||||| CTTGTGTAGT AGCTCGTGAC AGTCAACCAG AAAATCATAA GCATCCTCCG ATTCAGCACC 360 CTTGAAGACT GGAGGTTTCA ATTTCAAGAA CTTATTGAAA AGTTCGTGCT GATCACTTGT 58394 ||||||||| |||||||||| |||||||||| |||| ||||| ||||| |||| ||||| |||| CTTGAAGACC GGAGGTTTCA ATTTCAAGAA CTTACTGAAA AGTTCATGCT GATCATTTGT 420 CATTATAGGT CCTGTAGTCA ATCGAGGAAA CGTGCCTATT TCCAATGAGG CATCCATGCG 58334 ||||||||| | ||||||| | || ||||| |||||||| ||||||| |||||||||| CATTATAGGG ACAGTAGTCA AACGTGGAAA TGTGCCTATG TCCAATGGAA CATCCATGCG 480 GGGAGCCATA GCAGCTGCAT GTTGTACTCC CGAAACCTGA GGCGTTGGTG CAGAAAACAC 58274 |||||||||| | ||| |||| |||||||| | |||||| || || ||||| | |||||||||| GGGAGCCATA GTAGCCGCAT GTTGTACTTC TGAAACCGGA GGTGTTGGCG CAGAAAACAC 540 TGGAGGTGTC TGGCCTTGAT CAGATAACCC GCTAAGATAA GCAAGAACCT GGTTAATCAT 58214 |||||||| || ||||||| |||||||||| |||||||||| || ||||||| | || ||||| TGGAGGTGCT TGACCTTGAT CAGATAACCC GCTAAGATAA GCCAGAACCT GATTGATCAT 600 CTCTGGGGTA GGTTGGGGTG GTAATTCCTC ATTCTGCACT TGTTCATCCT CCCCTTCCTC 58154 |||||||||| |||||||||| | | |||||| ||| |||||| || ||| | |||| ||| | CTCTGGGGTA GGTTGGGGTG GCATTTCCTC ATTTTGCACT TGNTCAGTTT CCCCATCC-C 659 ACCCTCTCT- TACTACTTCC TCAGTCGGTG GAGGAGTCAC CGCCCTAGTA CTAGATGGGC 58095 |||| ||| || ||||||| |||||| ||| || ||||||| ||||||||| |||||||| TCCCTTTCTC TATTACTTCC TCAGTCAGTG GAAGAGTCAC TGCCCTAGTA TCAGATGGGC 719 hqPGS_C08HBa0294K15.1-_SGN-E356614+ (58813 58095) ******************************************************************************** EST sequence 91 +strand 664 n (File: SGN-E352401+) 1 AATCCGCTCT TGAGGACTGA AACAGAGTTG AGTGGCATAT CTGGATAGTG CACGAAACTT 61 AGCCTCATAA GCATTAACTG ACACCCTACC TTGCTCTAGG CTCAAGAACT CATCCCTTTT 121 CTTATCCCTC AAAGTCCGGG GGATATACTT CTCCATAAAC AAACTATAGA ATGAGGCCCA 181 AGTCATAGGT GATGCCTCTA TTGGTTGACA CTCGATATGT GACCGCCACC ACATTTGGGC 241 GTTCCCTTGA AACTGATAAG TCACAAACTC CACACCAAAC CGTTCTACTA TACCCATCTT 301 GTGTAGTAGC TCGTGACAGT CAACCAGAAA ATCATAAGCA TCCTCCGATT CAGCACCCTT 361 GAAGACCGGA GGTTTCAATT TCAAGAACTT ACTGAAAAGT TCATGCTGAT CATTTGTCAT 421 TATAGGGACA GTAGTCAAAC GTGGAAATGT GCCTATGTCC AATGGAACAT CCATGCGGGG 481 AGCCATAGTA GCCGCATGTT GTACTTCTGA AACCGGAGGT GTTGGCGCAG AAAACACTGG 541 AGGTGCTTGA CCTTGATCAG ATAACCCGCT AAGATAAGCC AGAACCTGAT TGATCATCTC 601 TGGGGTAGGT TGGGGTGCCA TTTCCCTCAT TTGCACTTGT TCAGTTTCCC CATCCTCCCC 661 TTCT Predicted gene structure (within gDNA segment 62524 to 57114): Exon 1 58810 58147 ( 664 n); cDNA 1 664 ( 664 n); score: 0.861 MATCH C08HBa0294K15.1- SGN-E352401+ 0.861 664 1.000 C PGS_C08HBa0294K15.1-_SGN-E352401+ (58810 58147) Alignment (genomic DNA sequence = upper lines): AATCCGCTCT TGTGGACTGA AGCAAAGCTG GGTGGCATAC CTAGATAATG CACGACACTT 58751 |||||||||| || ||||||| | || || || |||||||| || |||| || ||||| |||| AATCCGCTCT TGAGGACTGA AACAGAGTTG AGTGGCATAT CTGGATAGTG CACGAAACTT 60 AGCCTCATAC GCAGTAACCG ACATCCTGCC TTGCTCTAGG CTCAAGAACT CATCTCTACT 58691 ||||||||| ||| |||| | ||| ||| || |||||||||| |||||||||| |||| || | AGCCTCATAA GCATTAACTG ACACCCTACC TTGCTCTAGG CTCAAGAACT CATCCCTTTT 120 CCTATCCCTC TAAGTCCGGG GTATATACTT CTCCATAAAC AAGCTAGAGA ATGATGCCCA 58631 | |||||||| ||||||||| | |||||||| |||||||||| || ||| ||| |||| ||||| CTTATCCCTC AAAGTCCGGG GGATATACTT CTCCATAAAC AAACTATAGA ATGAGGCCCA 180 AGTCATAGGC GGTGCCTGTG CTGGTTGACA CTCGACATAC GATCGCCACC ACATTTTGGA 58571 ||||||||| | ||||| | ||||||||| ||||| || || ||||||| |||||| || AGTCATAGGT GATGCCTCTA TTGGTTGACA CTCGATATGT GACCGCCACC ACATTTGGGC 240 ATTTCCCTGA AACTTATAGG TTACAAACTC AACACCGAAT CGTTCCACTA TGCCCATCTT 58511 || || ||| |||| ||| | | |||||||| ||||| || ||||| |||| | |||||||| GTTCCCTTGA AACTGATAAG TCACAAACTC CACACCAAAC CGTTCTACTA TACCCATCTT 300 ATGTAGAAAC TCATGACAAT CAACCACAAA ATCATAGGCA TCCTCAGATT CAGCACCCTT 58451 ||||| | | || ||||| | |||||| ||| |||||| ||| ||||| |||| |||||||||| GTGTAGTAGC TCGTGACAGT CAACCAGAAA ATCATAAGCA TCCTCCGATT CAGCACCCTT 360 GAAGACTGGA GGTTTCAATT TCAAGAACTT ATTGAAAAGT TCGTGCTGAT CACTTGTCAT 58391 |||||| ||| |||||||||| |||||||||| | |||||||| || ||||||| || ||||||| GAAGACCGGA GGTTTCAATT TCAAGAACTT ACTGAAAAGT TCATGCTGAT CATTTGTCAT 420 TATAGGTCCT GTAGTCAATC GAGGAAACGT GCCTATTTCC AATGAGGCAT CCATGCGGGG 58331 |||||| | |||||||| | | ||||| || |||||| ||| |||| ||| |||||||||| TATAGGGACA GTAGTCAAAC GTGGAAATGT GCCTATGTCC AATGGAACAT CCATGCGGGG 480 AGCCATAGCA GCTGCATGTT GTACTCCCGA AACCTGAGGC GTTGGTGCAG AAAACACTGG 58271 |||||||| | || ||||||| ||||| | || |||| |||| ||||| |||| |||||||||| AGCCATAGTA GCCGCATGTT GTACTTCTGA AACCGGAGGT GTTGGCGCAG AAAACACTGG 540 AGGTGTCTGG CCTTGATCAG ATAACCCGCT AAGATAAGCA AGAACCTGGT TAATCATCTC 58211 ||||| || |||||||||| |||||||||| ||||||||| |||||||| | | |||||||| AGGTGCTTGA CCTTGATCAG ATAACCCGCT AAGATAAGCC AGAACCTGAT TGATCATCTC 600 TGGGGTAGGT TGGGGTGGTA ATT-CCTCAT TCTGCACTTG TTCATCCTCC CCTTCCTCAC 58152 |||||||||| ||||||| | || |||||| | |||||||| |||| ||| || ||||| | TGGGGTAGGT TGGGGTGCCA TTTCCCTCAT T-TGCACTTG TTCAGTTTCC CCATCCTCCC 659 CCTCT 58147 | ||| CTTCT 664 hqPGS_C08HBa0294K15.1-_SGN-E352401+ (58810 58147) ******************************************************************************** EST sequence 136 +strand 543 n (File: SGN-E355026+) 1 GAACACATCC AAAAATTCTC AAACTACCAA AACTAATTCA ATTGAGGGTA CTTGGATAGT 61 GTCATCCTTG AGATGTGCCA AGAAGGATAG ACAACCCTTA CTAACCATCT TCTGAGCACA 121 AAGAAAGGAG ATAATACGCA CCGGATTGGA AGTGTAGTCA CCCTCCCACA CTAACGGATC 181 TGTCCCAGGC TTGGCTAACG TCACCGTTTT AGCATTACAA TCCAAGATCG CAAAATTGGG 241 AGAAAGCCAA GTCATACCCA GAATTACATC AAAGTCACCC ATTTCTAAAG TAACCAAATC 301 TAGATAAGTG TTGCTCCCCA CGAAATTCAC CAAACAAGAC CTATGTACCT TTTCAACTAT 361 CACAGACTCA CCCACCGGAG TAGAAACACG AATAGGCATG TCAAGTAATT CACAATGCAA 421 TTTTAGACCA TTAGCAAATG ATGAAGATAC ATATGAAAAC GTGGAGCCAG GGTCAAATAA 481 TACAGATGCC ATGCAATCAC AAACCAAGAG ATTACCTGTG ATAACAGCAT CAGACGCCTC 541 TGC Predicted gene structure (within gDNA segment 61901 to 58646): Exon 1 59950 59409 ( 542 n); cDNA 2 543 ( 542 n); score: 0.869 MATCH C08HBa0294K15.1- SGN-E355026+ 0.869 542 0.998 C PGS_C08HBa0294K15.1-_SGN-E355026+ (59950 59409) Alignment (genomic DNA sequence = upper lines): AACACATCCA AAAACTCACG GACTATCGAA ACCGACTCAA TTGAAGGTAC TTGGGTAGTA 59891 |||||||||| |||| || | |||| | || || | |||| |||| ||||| |||| |||| AACACATCCA AAAATTCTCA AACTACCAAA ACTAATTCAA TTGAGGGTAC TTGGATAGTG 61 TCATCCCTGA GGTGTGCCAA GAAAGCTAAA CACCCTTTAC TAACCATTCT CTTAGCACGA 59831 |||||| ||| | |||||||| ||| | || | || || |||| ||||||| | || ||||| | TCATCCTTGA GATGTGCCAA GAAGGATAGA CAACCCTTAC TAACCATCTT CTGAGCACAA 121 AGAAATGAGA TGATACGAAC TGGAGTGGGA GTGTAGTCAC CCTCCCACAC TAACGGATCT 59771 ||||| |||| | ||||| || ||| ||| | |||||||||| |||||||||| |||||||||| AGAAAGGAGA TAATACGCAC CGGATTGGAA GTGTAGTCAC CCTCCCACAC TAACGGATCT 181 GTCTCAGGCT TGGCCAATGT CACAGTTTTG GCATTACAGT CTAAGATTGC AAAGTTTGGA 59711 ||| |||||| |||| || || ||| ||||| |||||||| | | ||||| || ||| || ||| GTCCCAGGCT TGGCTAACGT CACCGTTTTA GCATTACAAT CCAAGATCGC AAAATTGGGA 241 GAAAGCCAAG TCATACCCAG AATTACATCG AAATCAACCA TTTCTAAGAT AACCAAGTCT 59651 |||||||||| |||||||||| ||||||||| || ||| ||| ||||||| | |||||| ||| GAAAGCCAAG TCATACCCAG AATTACATCA AAGTCACCCA TTTCTAAAGT AACCAAATCT 301 ACATGAGTAT TACTCCCCAT AAAAGTCACA AGACAAGACC TATACACCTT TTCAACTATC 59591 | || ||| | | ||||||| ||| |||| | |||||||| ||| ||||| |||||||||| AGATAAGTGT TGCTCCCCAC GAAATTCACC AAACAAGACC TATGTACCTT TTCAACTATC 361 ACAGACTCAC CCACCGGAGT AGAAACACGA ATAGGCATGT CAAGCAATTC ACAATGTAAA 59531 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| |||||| || ACAGACTCAC CCACCGGAGT AGAAACACGA ATAGGCATGT CAAGTAATTC ACAATGCAAT 421 TTAAGACCAG TAGCAAATGA GGAAGATACA TATGAAAATG TGGATCCAGG ATCAAATAAT 59471 || |||||| |||||||||| ||||||||| |||||||| | |||| ||||| ||||||||| TTTAGACCAT TAGCAAATGA TGAAGATACA TATGAAAACG TGGAGCCAGG GTCAAATAAT 481 ACAGAAGCCA TGCAATCACA AACCAAAAGA TTACCTGTGA TAACAACATC AGATGTCTCC 59411 ||||| |||| |||||||||| |||||| ||| |||||||||| ||||| |||| ||| | ||| ACAGATGCCA TGCAATCACA AACCAAGAGA TTACCTGTGA TAACAGCATC AGACGCCTCT 541 GC 59409 || GC 543 hqPGS_C08HBa0294K15.1-_SGN-E355026+ (59950 59409) ******************************************************************************** EST sequence 134 +strand 761 n (File: SGN-E355244+) 1 CGGAAACTCC CATCCTTCTT CTTCACAAAC AAAATCGGAG CACCCCAAGG AGATGCACTT 61 GGTCTAATGA AACCTTTGCT CAACAACTCT TGAAGTTGGG CCTTTAACTC TCTTAACTCT 121 ACGGGAGCCA TTCTATAAGG GGGTATAGAA ATGGGGCGTG TGCCCGGTTC AAGATCGATA 181 CAGAAGTCAA TATCCCTATC TGGTGGCATA CCAGGAAGAT CTGCAGGGAA CACATCCAAA 241 AACTCACAGA CTATAAAAAC CGACTCAATC GAAGGTACTT GGGTAGTGTC ATCCTTGAGA 301 TGTGCCAAGA AAGCTAAACA CCCTTTACTA ACCATTTTCT TAGCACGAAG AAAGGAGATG 361 ATGCACACCG GATTGGAAGT GTAGTCACCC TCCCACACTA ACGGATCTGT CCCAGGCTTG 421 GCTAATGTCA CCGTTTTAGC ATTACAATCC AAGATCGCAA ATTGCGGAGA AAGCCAAGTC 481 ATACCCAGAA TTACATCAAA ATCAACCATT TCTAAGATAA CCAAATCTAC ATAAGTGTTG 541 CTCCCCACAA AGTTCACCAA ACAAGACCTA TATACCTTTT CAACTACCAC AGACTCACCC 601 ACCGGAGTAG AAACACGAAT AGGCATATCA AGTAATTCAC AATGTAAATT TAGACCGTTA 661 GCAAATGAGG AAGATACANT AGAAAACGTG GATCCCAGGA TCAACAATAC AGAAGCCATG 721 CAATCACAAT CGAAAGATTA CCTGTGATGA CAGCATCTAA T Predicted gene structure (within gDNA segment 60859 to 58061): Exon 1 60178 59417 ( 762 n); cDNA 1 761 ( 761 n); score: 0.894 MATCH C08HBa0294K15.1- SGN-E355244+ 0.894 762 1.001 C PGS_C08HBa0294K15.1-_SGN-E355244+ (60178 59417) Alignment (genomic DNA sequence = upper lines): CGAAAACTTC CATCCTTCTT CTTCACAAAC AAAACAGGAG TACCCCAAGG GGATGCACTT 60119 || ||||| | |||||||||| |||||||||| |||| |||| ||||||||| ||||||||| CGGAAACTCC CATCCTTCTT CTTCACAAAC AAAATCGGAG CACCCCAAGG AGATGCACTT 60 GGTCTAATAA AACCTTTCCC TAACAACTCT TGAAGTTGGG CCTTTAACTC TCTTAACTCA 60059 |||||||| | ||||||| | ||||||||| |||||||||| |||||||||| ||||||||| GGTCTAATGA AACCTTTGCT CAACAACTCT TGAAGTTGGG CCTTTAACTC TCTTAACTCT 120 GCGGGAGCCA TTCTATAAGG GGGTATGGAA ATGGGGCGAG TACCCGGCTC CAGATCAATA 59999 ||||||||| |||||||||| |||||| ||| |||||||| | | ||||| || ||||| ||| ACGGGAGCCA TTCTATAAGG GGGTATAGAA ATGGGGCGTG TGCCCGGTTC AAGATCGATA 180 CAGAAATCAA TATCTCTATC TGGTGGCATA CCAGAAAGGT CTGCAGGAAA CACATCCAAA 59939 ||||| |||| |||| ||||| |||||||||| |||| ||| | ||||||| || |||||||||| CAGAAGTCAA TATCCCTATC TGGTGGCATA CCAGGAAGAT CTGCAGGGAA CACATCCAAA 240 AACTCACGGA CTATCGAAAC CGACTCAATT GAAGGTACTT GGGTAGTATC ATCCCTGAGG 59879 ||||||| || |||| |||| ||||||||| |||||||||| ||||||| || |||| |||| AACTCACAGA CTATAAAAAC CGACTCAATC GAAGGTACTT GGGTAGTGTC ATCCTTGAGA 300 TGTGCCAAGA AAGCTAAACA CCCTTTACTA ACCATTCTCT TAGCACGAAG AAATGAGATG 59819 |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| ||| |||||| TGTGCCAAGA AAGCTAAACA CCCTTTACTA ACCATTTTCT TAGCACGAAG AAAGGAGATG 360 ATACGAACTG GAGTGGGAGT GTAGTCACCC TCCCACACTA ACGGATCTGT CTCAGGCTTG 59759 || | || | || ||| ||| |||||||||| |||||||||| |||||||||| | |||||||| ATGCACACCG GATTGGAAGT GTAGTCACCC TCCCACACTA ACGGATCTGT CCCAGGCTTG 420 GCCAATGTCA CAGTTTTGGC ATTACAGTCT AAGATTGCAA AGTTTGGAGA AAGCCAAGTC 59699 || ||||||| | ||||| || |||||| || ||||| |||| | | ||||| |||||||||| GCTAATGTCA CCGTTTTAGC ATTACAATCC AAGATCGCAA ATTGCGGAGA AAGCCAAGTC 480 ATACCCAGAA TTACATCGAA ATCAACCATT TCTAAGATAA CCAAGTCTAC ATGAGTATTA 59639 |||||||||| ||||||| || |||||||||| |||||||||| |||| ||||| || ||| || ATACCCAGAA TTACATCAAA ATCAACCATT TCTAAGATAA CCAAATCTAC ATAAGTGTTG 540 CTCCCCATAA AAGTCACAAG ACAAGACCTA TACACCTTTT CAACTATCAC AGACTCACCC 59579 ||||||| || | |||| | |||||||||| || ||||||| |||||| ||| |||||||||| CTCCCCACAA AGTTCACCAA ACAAGACCTA TATACCTTTT CAACTACCAC AGACTCACCC 600 ACCGGAGTAG AAACACGAAT AGGCATGTCA AGCAATTCAC AATGTAAATT AAGACCAGTA 59519 |||||||||| |||||||||| |||||| ||| || ||||||| |||||||||| ||||| || ACCGGAGTAG AAACACGAAT AGGCATATCA AGTAATTCAC AATGTAAATT TAGACCGTTA 660 GCAAATGAGG AAGATACATA TGAAAATGTG GAT-CCAGGA TCAAATAATA CAGAAGCCAT 59460 |||||||||| |||||||| ||||| ||| ||| |||||| || || |||| |||||||||| GCAAATGAGG AAGATACANT AGAAAACGTG GATCCCAGGA TC-AACAATA CAGAAGCCAT 719 GCAATCACAA ACCAAAAGAT TACCTGTGAT AACAACATCA GAT 59417 |||||||| | | | |||||| |||||||||| ||| |||| || GCAATCAC-A ATCGAAAGAT TACCTGTGAT GACAGCATCT AAT 761 hqPGS_C08HBa0294K15.1-_SGN-E355244+ (60178 59417) ******************************************************************************** EST sequence 107 +strand 331 n (File: SGN-E352716+) 1 GATCTGTCCC AGGCTTGGCT AACGTCACAG TTTTAGCATT ACAATCCAAG ATTGCAAAAT 61 TTGGAGAAAG CCAAGTCATA CCCAGAATTA CATCAAAATC AACCATTTCT AAGATAACCA 121 AGTCTACATA AGTATTGCTC CCCACAAAAG TCACCAGACC AGACCTATAT ACTTTTTCAA 181 CTATCACAGA CTCACCCACC GGAGTAGAAA CACGAATAGG CATGTCAAGC AATTCATAAT 241 TTAATTTAAG ACCAGTAGCA AATGAGGAAG ATACATATGA AAATGTGGAT CCAGGGTCAA 301 ATAATACAAA AGCCATGCAA TCACAAAAAA A Predicted gene structure (within gDNA segment 60906 to 58799): Exon 1 59775 59445 ( 331 n); cDNA 1 331 ( 331 n); score: 0.934 MATCH C08HBa0294K15.1- SGN-E352716+ 0.934 331 1.000 C PGS_C08HBa0294K15.1-_SGN-E352716+ (59775 59445) Alignment (genomic DNA sequence = upper lines): GATCTGTCTC AGGCTTGGCC AATGTCACAG TTTTGGCATT ACAGTCTAAG ATTGCAAAGT 59716 |||||||| | ||||||||| || ||||||| |||| ||||| ||| || ||| |||||||| | GATCTGTCCC AGGCTTGGCT AACGTCACAG TTTTAGCATT ACAATCCAAG ATTGCAAAAT 60 TTGGAGAAAG CCAAGTCATA CCCAGAATTA CATCGAAATC AACCATTTCT AAGATAACCA 59656 |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| TTGGAGAAAG CCAAGTCATA CCCAGAATTA CATCAAAATC AACCATTTCT AAGATAACCA 120 AGTCTACATG AGTATTACTC CCCATAAAAG TCACAAGACA AGACCTATAC ACCTTTTCAA 59596 ||||||||| |||||| ||| |||| ||||| |||| |||| ||||||||| || ||||||| AGTCTACATA AGTATTGCTC CCCACAAAAG TCACCAGACC AGACCTATAT ACTTTTTCAA 180 CTATCACAGA CTCACCCACC GGAGTAGAAA CACGAATAGG CATGTCAAGC AATTCACAAT 59536 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| CTATCACAGA CTCACCCACC GGAGTAGAAA CACGAATAGG CATGTCAAGC AATTCATAAT 240 GTAAATTAAG ACCAGTAGCA AATGAGGAAG ATACATATGA AAATGTGGAT CCAGGATCAA 59476 ||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| TTAATTTAAG ACCAGTAGCA AATGAGGAAG ATACATATGA AAATGTGGAT CCAGGGTCAA 300 ATAATACAGA AGCCATGCAA TCACAAACCA A 59445 |||||||| | |||||||||| ||||||| | | ATAATACAAA AGCCATGCAA TCACAAAAAA A 331 hqPGS_C08HBa0294K15.1-_SGN-E352716+ (59775 59445) ******************************************************************************** EST sequence 34 -strand 659 n (File: SGN-E352117-) 1 CCCAAGGGGA TGCACTTGGC NTAATGAAGC CCTTACNTAA CAACTCTTGA AGTTGGGCCT 61 TTAACTCCCC CAACTCAGCG GGAGCCATTC TATAAGGGGG TATGGAAATG GGGTGATCAC 121 CCGGCTCCAG ATCAATGCAA AAGTCAATAT CCCTATCCGG TGGCATACCA GGAAGGTCTG 181 CAGGAAACAC ATCCAGAAAC TCACGGACTA TCGAAACTGA CTCAATTGAA GGTACTTGGG 241 TAGTATCATC CCTGAGGTGT GCCAAGAAAG CTAAACACCC TTTACTAACC ATTCTCTTAG 301 CACAAAGAAA GGAGATGATA CGAACTGGAG TGGAAGTGTA GTCACCCTCC CACACTAACG 361 CATCTATCTC AGGCTTGGCC AACGTTACAG TTTTAGCATT ACAATCCAAG ATTGCAAAAT 421 TTGGAGACAG CCAAGTCATA CCCAGAATTA CATCGAAGTC AACCATTTAT AGGATAACCA 481 AGTCTACATG AGTATTGCTC CCACAAATGT CACAAGACAA GACCTATACA CCTTTTCAAC 541 AATCACAGAC TCACCCACCG GAGTAGAACA CGAATAGGTA TGTCAAGCGA TTCACTATGT 601 AAATTAAGAA CAGTAGCAAA TGAGGAAGAT ACATATGAAA ATGTGGAGGC AGGATCAAA Predicted gene structure (within gDNA segment 60745 to 58767): Exon 1 60135 59475 ( 661 n); cDNA 1 659 ( 659 n); score: 0.927 MATCH C08HBa0294K15.1- SGN-E352117- 0.927 661 1.003 C PGS_C08HBa0294K15.1-_SGN-E352117- (60135 59475) Alignment (genomic DNA sequence = upper lines): CCCAAGGGGA TGCACTTGGT CTAATAAAAC CTTTCCCTAA CAACTCTTGA AGTTGGGCCT 60076 |||||||||| ||||||||| |||| || | | || | ||| |||||||||| |||||||||| CCCAAGGGGA TGCACTTGGC NTAATGAAGC CCTTACNTAA CAACTCTTGA AGTTGGGCCT 60 TTAACTCTCT TAACTCAGCG GGAGCCATTC TATAAGGGGG TATGGAAATG GGGCGAGTAC 60016 ||||||| | ||||||||| |||||||||| |||||||||| |||||||||| ||| || || TTAACTCCCC CAACTCAGCG GGAGCCATTC TATAAGGGGG TATGGAAATG GGGTGATCAC 120 CCGGCTCCAG ATCAATACAG AAATCAATAT CTCTATCTGG TGGCATACCA GAAAGGTCTG 59956 |||||||||| |||||| || || ||||||| | ||||| || |||||||||| | |||||||| CCGGCTCCAG ATCAATGCAA AAGTCAATAT CCCTATCCGG TGGCATACCA GGAAGGTCTG 180 CAGGAAACAC ATCCAAAAAC TCACGGACTA TCGAAACCGA CTCAATTGAA GGTACTTGGG 59896 |||||||||| ||||| |||| |||||||||| ||||||| || |||||||||| |||||||||| CAGGAAACAC ATCCAGAAAC TCACGGACTA TCGAAACTGA CTCAATTGAA GGTACTTGGG 240 TAGTATCATC CCTGAGGTGT GCCAAGAAAG CTAAACACCC TTTACTAACC ATTCTCTTAG 59836 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGTATCATC CCTGAGGTGT GCCAAGAAAG CTAAACACCC TTTACTAACC ATTCTCTTAG 300 CACGAAGAAA TGAGATGATA CGAACTGGAG TGGGAGTGTA GTCACCCTCC CACACTAACG 59776 ||| |||||| ||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| CACAAAGAAA GGAGATGATA CGAACTGGAG TGGAAGTGTA GTCACCCTCC CACACTAACG 360 GATCTGTCTC AGGCTTGGCC AATGTCACAG TTTTGGCATT ACAGTCTAAG ATTGCAAAGT 59716 |||| |||| |||||||||| || || |||| |||| ||||| ||| || ||| |||||||| | CATCTATCTC AGGCTTGGCC AACGTTACAG TTTTAGCATT ACAATCCAAG ATTGCAAAAT 420 TTGGAGAAAG CCAAGTCATA CCCAGAATTA CATCGAAATC AACCATTTCT AAGATAACCA 59656 ||||||| || |||||||||| |||||||||| ||||||| || |||||||| | | |||||||| TTGGAGACAG CCAAGTCATA CCCAGAATTA CATCGAAGTC AACCATTTAT AGGATAACCA 480 AGTCTACATG AGTATTACTC CCCATAAAAG TCACAAGACA AGACCTATAC ACCTTTTCAA 59596 |||||||||| |||||| || |||| ||| | |||||||||| |||||||||| |||||||||| AGTCTACATG AGTATTGCT- CCCACAAATG TCACAAGACA AGACCTATAC ACCTTTTCAA 539 CTATCACAGA CTCACCCACC GGAGTAGAAA CACGAATAGG CATGTCAAGC AATTCACAAT 59536 | |||||||| |||||||||| ||||||| || |||||||||| ||||||||| |||||| || CAATCACAGA CTCACCCACC GGAGTAG-AA CACGAATAGG TATGTCAAGC GATTCACTAT 598 GTAAATTAAG ACCAGTAGCA AATGAGGAAG ATACATATGA AAATGTGGAT CCAGGATCAA 59476 |||||||||| | |||||||| |||||||||| |||||||||| ||||||||| ||||||||| GTAAATTAAG AACAGTAGCA AATGAGGAAG ATACATATGA AAATGTGGAG GCAGGATCAA 658 A 59475 | A 659 hqPGS_C08HBa0294K15.1-_SGN-E352117- (60135 59475) ******************************************************************************** EST sequence 118 +strand 661 n (File: SGN-E351414+) 1 CGGAAACTCC CATCCTTCTT CTTCACAAAC AAAATCGGAG CACCCCAAGG AGATGCACTT 61 GGTCTAATGA AACCTTTGCT CAACAACTCT TGAAGTTGGG CCTTTAACTC TCTTAACTCT 121 ACGGGAGCCA TTCTATAAGG GGGTATAGAA ATGGGGCGTG TGCCCGGTTC AAGATCGATA 181 CAGAAGTCAA TATCCCTATC TGGTGGCATA CCAGGAAGAT CTGCAGGGAA CACATCCAAA 241 AACTCACAGA CTATAAAAAC CGACTCAATC GAAGGTACTT GGGTAGTGTC ATCCTTGAGA 301 TGTGCCAAGA AAGCTAAACA CCCTTTACTA ACCATTTTCT TAGCACGAAG AAAGGAGATG 361 ATGCACACCG GATTGGAAGT GTAGTCACCC TCCCACACTA ACGGATCTGT CCCAGGCTTG 421 GCTAATGTCA CCGTTTTAGC ATTACAATCC AAGATCGCAA ATTGCGGAGA AAGCCAAGTC 481 ATACCCAGAA TTACATCAAA ATCAACCATT TCTAAGATAA CCAAATCTAC ATAAGTGTTG 541 CTCCCCACAA AGTTCACCAA ACAAGACCTA TATACCTTTT CAACTACCAC AGACTCACCC 601 ACCGGAGTAG AAACACGAAT AGGCATATCA AGTAATTCAC AATGTAAATT TAGACCGTTA 661 G Predicted gene structure (within gDNA segment 60859 to 58809): Exon 1 60178 59518 ( 661 n); cDNA 1 661 ( 661 n); score: 0.902 MATCH C08HBa0294K15.1- SGN-E351414+ 0.902 661 1.000 C PGS_C08HBa0294K15.1-_SGN-E351414+ (60178 59518) Alignment (genomic DNA sequence = upper lines): CGAAAACTTC CATCCTTCTT CTTCACAAAC AAAACAGGAG TACCCCAAGG GGATGCACTT 60119 || ||||| | |||||||||| |||||||||| |||| |||| ||||||||| ||||||||| CGGAAACTCC CATCCTTCTT CTTCACAAAC AAAATCGGAG CACCCCAAGG AGATGCACTT 60 GGTCTAATAA AACCTTTCCC TAACAACTCT TGAAGTTGGG CCTTTAACTC TCTTAACTCA 60059 |||||||| | ||||||| | ||||||||| |||||||||| |||||||||| ||||||||| GGTCTAATGA AACCTTTGCT CAACAACTCT TGAAGTTGGG CCTTTAACTC TCTTAACTCT 120 GCGGGAGCCA TTCTATAAGG GGGTATGGAA ATGGGGCGAG TACCCGGCTC CAGATCAATA 59999 ||||||||| |||||||||| |||||| ||| |||||||| | | ||||| || ||||| ||| ACGGGAGCCA TTCTATAAGG GGGTATAGAA ATGGGGCGTG TGCCCGGTTC AAGATCGATA 180 CAGAAATCAA TATCTCTATC TGGTGGCATA CCAGAAAGGT CTGCAGGAAA CACATCCAAA 59939 ||||| |||| |||| ||||| |||||||||| |||| ||| | ||||||| || |||||||||| CAGAAGTCAA TATCCCTATC TGGTGGCATA CCAGGAAGAT CTGCAGGGAA CACATCCAAA 240 AACTCACGGA CTATCGAAAC CGACTCAATT GAAGGTACTT GGGTAGTATC ATCCCTGAGG 59879 ||||||| || |||| |||| ||||||||| |||||||||| ||||||| || |||| |||| AACTCACAGA CTATAAAAAC CGACTCAATC GAAGGTACTT GGGTAGTGTC ATCCTTGAGA 300 TGTGCCAAGA AAGCTAAACA CCCTTTACTA ACCATTCTCT TAGCACGAAG AAATGAGATG 59819 |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| ||| |||||| TGTGCCAAGA AAGCTAAACA CCCTTTACTA ACCATTTTCT TAGCACGAAG AAAGGAGATG 360 ATACGAACTG GAGTGGGAGT GTAGTCACCC TCCCACACTA ACGGATCTGT CTCAGGCTTG 59759 || | || | || ||| ||| |||||||||| |||||||||| |||||||||| | |||||||| ATGCACACCG GATTGGAAGT GTAGTCACCC TCCCACACTA ACGGATCTGT CCCAGGCTTG 420 GCCAATGTCA CAGTTTTGGC ATTACAGTCT AAGATTGCAA AGTTTGGAGA AAGCCAAGTC 59699 || ||||||| | ||||| || |||||| || ||||| |||| | | ||||| |||||||||| GCTAATGTCA CCGTTTTAGC ATTACAATCC AAGATCGCAA ATTGCGGAGA AAGCCAAGTC 480 ATACCCAGAA TTACATCGAA ATCAACCATT TCTAAGATAA CCAAGTCTAC ATGAGTATTA 59639 |||||||||| ||||||| || |||||||||| |||||||||| |||| ||||| || ||| || ATACCCAGAA TTACATCAAA ATCAACCATT TCTAAGATAA CCAAATCTAC ATAAGTGTTG 540 CTCCCCATAA AAGTCACAAG ACAAGACCTA TACACCTTTT CAACTATCAC AGACTCACCC 59579 ||||||| || | |||| | |||||||||| || ||||||| |||||| ||| |||||||||| CTCCCCACAA AGTTCACCAA ACAAGACCTA TATACCTTTT CAACTACCAC AGACTCACCC 600 ACCGGAGTAG AAACACGAAT AGGCATGTCA AGCAATTCAC AATGTAAATT AAGACCAGTA 59519 |||||||||| |||||||||| |||||| ||| || ||||||| |||||||||| ||||| || ACCGGAGTAG AAACACGAAT AGGCATATCA AGTAATTCAC AATGTAAATT TAGACCGTTA 660 G 59518 | G 661 hqPGS_C08HBa0294K15.1-_SGN-E351414+ (60178 59518) ******************************************************************************** EST sequence 132 +strand 658 n (File: SGN-E355232+) 1 TCAATGCGAG GAAGAGGATA CTTGTTCTTA ATAGTTACCT TGTTCAGTTG TCTGTAGTCT 61 ATGCACATTC TAAAACTTCC ATCCTTCTTC TTCACAAATA AAACTGGAGC ACCCCAAGGA 121 GATGCACTTG GTCTAATGAA GACCTTGCTC AACAACTCTT GAAGTTGAGC CTTTAACTCT 181 CTTAATTCGG CGGGAGCCAT TCTATAAGGG GGTATAGAAA TGGGGCGTGT GCCTGGTTCA 241 AGATCGATAC AGAAGTCAAT ATCCCTATCT GGTGGCATAC CAGGAAGATC TGCAGGAAAC 301 ACGTCCAAAA ACTCGCGGAC TACCGAAACC GACTCAATTG AGGGTACTTG AGTAGTGTCA 361 TCCTTGAGAT GTGCCAAGAA AGCTGAACAC CCTTTACTAA CCATTTTCTT AGCACGAAGA 421 AAGGATATGA TACGCACCAG ATTGGAAGTG TAGTCACCCT CCCACACTAA CGGATCTGTC 481 CCAGGCTTGG CTAACGTCAC CGTTTTAGCA TTACAATCCA AGATCGCAAA ATTTGGAGAA 541 AGCCAAGTCA TACCCAGAAT TACATCAATG TCACCCATTT CTAAAAAACC AAATCTACAT 601 AAGTGTTGCT CCCCACGAAA TTCNACAAAA CAGAACTATG TACCTTTTCA ACTACCAC Predicted gene structure (within gDNA segment 60910 to 58152): Exon 1 60247 59589 ( 659 n); cDNA 1 658 ( 658 n); score: 0.878 MATCH C08HBa0294K15.1- SGN-E355232+ 0.878 659 1.002 C PGS_C08HBa0294K15.1-_SGN-E355232+ (60247 59589) Alignment (genomic DNA sequence = upper lines): TCGATGTGAG GAAGAGGATA CTTGTTCTTA ACAGTTACCT TATTCAGTTG TCTGTAGTCA 60188 || ||| ||| |||||||||| |||||||||| | |||||||| | |||||||| ||||||||| TCAATGCGAG GAAGAGGATA CTTGTTCTTA ATAGTTACCT TGTTCAGTTG TCTGTAGTCT 60 ATGCACATCC GAAAACTTCC ATCCTTCTTC TTCACAAACA AAACAGGAGT ACCCCAAGGG 60128 |||||||| | ||||||||| |||||||||| |||||||| | |||| |||| ||||||||| ATGCACATTC TAAAACTTCC ATCCTTCTTC TTCACAAATA AAACTGGAGC ACCCCAAGGA 120 GATGCACTTG GTCTAAT-AA AACCTTTCCC TAACAACTCT TGAAGTTGGG CCTTTAACTC 60069 |||||||||| ||||||| || ||||| | | ||||||||| |||||||| | |||||||||| GATGCACTTG GTCTAATGAA GACCTTGCTC -AACAACTCT TGAAGTTGAG CCTTTAACTC 179 TCTTAACTCA GCGGGAGCCA TTCTATAAGG GGGTATGGAA ATGGGGCGAG TACCCGGCTC 60009 |||||| || |||||||||| |||||||||| |||||| ||| |||||||| | | || || || TCTTAATTCG GCGGGAGCCA TTCTATAAGG GGGTATAGAA ATGGGGCGTG TGCCTGGTTC 239 CAGATCAATA CAGAAATCAA TATCTCTATC TGGTGGCATA CCAGAAAGGT CTGCAGGAAA 59949 ||||| ||| ||||| |||| |||| ||||| |||||||||| |||| ||| | |||||||||| AAGATCGATA CAGAAGTCAA TATCCCTATC TGGTGGCATA CCAGGAAGAT CTGCAGGAAA 299 CACATCCAAA AACTCACGGA CTATCGAAAC CGACTCAATT GAAGGTACTT GGGTAGTATC 59889 ||| |||||| ||||| |||| ||| |||||| |||||||||| || ||||||| | ||||| || CACGTCCAAA AACTCGCGGA CTACCGAAAC CGACTCAATT GAGGGTACTT GAGTAGTGTC 359 ATCCCTGAGG TGTGCCAAGA AAGCTAAACA CCCTTTACTA ACCATTCTCT TAGCACGAAG 59829 |||| |||| |||||||||| ||||| |||| |||||||||| |||||| ||| |||||||||| ATCCTTGAGA TGTGCCAAGA AAGCTGAACA CCCTTTACTA ACCATTTTCT TAGCACGAAG 419 AAATGAGATG ATACGAACTG GAGTGGGAGT GTAGTCACCC TCCCACACTA ACGGATCTGT 59769 ||| || ||| ||||| || || ||| ||| |||||||||| |||||||||| |||||||||| AAAGGATATG ATACGCACCA GATTGGAAGT GTAGTCACCC TCCCACACTA ACGGATCTGT 479 CTCAGGCTTG GCCAATGTCA CAGTTTTGGC ATTACAGTCT AAGATTGCAA AGTTTGGAGA 59709 | |||||||| || || |||| | ||||| || |||||| || ||||| |||| | |||||||| CCCAGGCTTG GCTAACGTCA CCGTTTTAGC ATTACAATCC AAGATCGCAA AATTTGGAGA 539 AAGCCAAGTC ATACCCAGAA TTACATCGAA ATCAACCATT TCTAAGATAA CCAAGTCTAC 59649 |||||||||| |||||||||| ||||||| | ||| ||||| ||||| | || |||| ||||| AAGCCAAGTC ATACCCAGAA TTACATCAAT GTCACCCATT TCTAA-AAAA CCAAATCTAC 598 ATGAGTATTA CTCCCCATAA AAGTCACAAG ACAAGACCTA TACACCTTTT CAACTATCAC 59589 || ||| || ||||||| | || || | | ||| ||| | ||||||| |||||| ||| ATAAGTGTTG CTCCCCACGA AATTCNACAA AACAGAACTA TGTACCTTTT CAACTACCAC 658 hqPGS_C08HBa0294K15.1-_SGN-E355232+ (60247 59589) ******************************************************************************** EST sequence 140 +strand 679 n (File: SGN-E368762+) 1 GTCTCACCCA ATTCTTCACT GTCTCAATCT TACAAGGATC CACCATCACT CCATCCTTAG 61 AAACCACGTG CCCCAAGAAG GACACTGCAT CTATCCAAAA CTCACACTTA GAGAACTTGG 121 CATAAAGCTT TTTCTCCCTC AACATTTCTA ATACAATTCT CAAATGCTCC TCATGTTCCT 181 TCTTACTATT AGAGTATATC AGTATATCAT CAATAAACAT GATGACAAAG AGATCCAAAT 241 ATGGCTTAAA ATCCCGTTCA TCAAGCTCAT GAACGCAGCA GGGGCATTCG TAAGACCAAA 301 AGACATCACT ACAAATTCGT AATGCCCATA CCTGGTTCTA AAAGCAGTCT TTGGCACATC 361 CGTTGCCCGT ATTTTCAATT GATGATAACC GGATCTCAAG TCAATCTTAG AGAAGACACA 421 AGCACCTTGT AACTGATCGA ACAAGTCATC AATGCGAGGA AGTGGATACT TGTTCTTAAT 481 AGTTACCTTG TTCAACTGCC GGTAGTCTAT GCACATCCGA AAACTCCCAT CCTTCTTCTT 541 CACAAACCAA ACCGGAGCAC CCCAAGGAGA TGCACTTGGT CTAATGAAGA CTTTGCTCAA 601 AAACTCTTGA AGTTGGGCCT TTAACTCTCT TAACTCCGCG GGAGCCATTC TATAAGGGGG 661 TATAGAAATG GGGCGAGTG Predicted gene structure (within gDNA segment 61692 to 59263): Exon 1 60696 60018 ( 679 n); cDNA 1 678 ( 678 n); score: 0.890 MATCH C08HBa0294K15.1- SGN-E368762+ 0.890 679 1.000 C PGS_C08HBa0294K15.1-_SGN-E368762+ (60696 60018) Alignment (genomic DNA sequence = upper lines): GTCTTTCCCA ACTCTTCACT GCTTCGATCT TAGAAGGATC CACAATCACT CCATCCTTAG 60637 |||| |||| | |||||||| | || |||| || ||||||| ||| |||||| |||||||||| GTCTCACCCA ATTCTTCACT GTCTCAATCT TACAAGGATC CACCATCACT CCATCCTTAG 60 AAACCACATG CCCCAAGAAG GACACTGAAT CTAGCCAAAA CTCACACTTG GAGAATTTGG 60577 ||||||| || |||||||||| ||||||| || ||| |||||| ||||||||| ||||| |||| AAACCACGTG CCCCAAGAAG GACACTGCAT CTATCCAAAA CTCACACTTA GAGAACTTGG 120 CATTAAGCTT TTTCTCCCTC AACATTTCCA ATACCATTCT CAAGTGCTCC TCATGTTCTT 60517 ||| |||||| |||||||||| |||||||| | |||| ||||| ||| |||||| |||||||| | CATAAAGCTT TTTCTCCCTC AACATTTCTA ATACAATTCT CAAATGCTCC TCATGTTCCT 180 TCTTGCTCTT TGAGTATACC AGTATATCAT CAACGAATAC AATGACAAAG AGATCTAGAT 60457 |||| || || ||||||| | |||||||||| ||| || | ||||||||| ||||| | || TCTTACTATT AGAGTATATC AGTATATCAT CAATAAACAT GATGACAAAG AGATCCAAAT 240 ATGGATTAAA GATTCCGTTC ATCAAGCTCA TGAACGCAGC AGGGGCATTC GTAAGCCCAA 60397 |||| ||||| || |||||| |||||||||| |||||||||| |||||||||| ||||| |||| ATGGCTTAAA -ATCCCGTTC ATCAAGCTCA TGAACGCAGC AGGGGCATTC GTAAGACCAA 299 AAGACATTAC TAAGAACTCG TAATACCCAT ATCTTGTTCG AAAAGCAGTC TTGGGCACAT 60337 ||||||| || || || ||| |||| ||||| | || |||| |||||||||| || ||||||| AAGACATCAC TACAAATTCG TAATGCCCAT ACCTGGTTCT AAAAGCAGTC TTTGGCACAT 359 TCGTTGCCCA TATTTTCAAT TGATGATAAC CAGATCTCAA ATCAATTTTT GAGAAGGTAC 60277 |||||||| |||||||||| |||||||||| | |||||||| ||||| || |||||| || CCGTTGCCCG TATTTTCAAT TGATGATAAC CGGATCTCAA GTCAATCTTA GAGAAGACAC 419 AAGCACCTTG TAACTGATCG AACAAATCAT CGATGTGAGG AAGAGGATAC TTGTTCTTAA 60217 |||||||||| |||||||||| ||||| |||| | ||| |||| ||| |||||| |||||||||| AAGCACCTTG TAACTGATCG AACAAGTCAT CAATGCGAGG AAGTGGATAC TTGTTCTTAA 479 CAGTTACCTT ATTCAGTTGT CTGTAGTCAA TGCACATCCG AAAACTTCCA TCCTTCTTCT 60157 ||||||||| |||| || | |||||| | |||||||||| |||||| ||| |||||||||| TAGTTACCTT GTTCAACTGC CGGTAGTCTA TGCACATCCG AAAACTCCCA TCCTTCTTCT 539 TCACAAACAA AACAGGAGTA CCCCAAGGGG ATGCACTTGG TCTAATAAAA CCTTTCCCTA 60097 |||||||| | ||| |||| | |||||||| | |||||||||| |||||| || |||| | | TCACAAACCA AACCGGAGCA CCCCAAGGAG ATGCACTTGG TCTAATGAAG ACTTTGCTCA 599 ACAACTCTTG AAGTTGGGCC TTTAACTCTC TTAACTCAGC GGGAGCCATT CTATAAGGGG 60037 | |||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| AAAACTCTTG AAGTTGGGCC TTTAACTCTC TTAACTCCGC GGGAGCCATT CTATAAGGGG 659 GTATGGAAAT GGGGCGAGT 60018 |||| ||||| ||||||||| GTATAGAAAT GGGGCGAGT 678 hqPGS_C08HBa0294K15.1-_SGN-E368762+ (60696 60018) ******************************************************************************** EST sequence 87 +strand 712 n (File: SGN-E379315+) 1 GAATCCCTTG ACAAATCGGC GGTAGTAGCT AGCTAACCCA ACAAAGCTCC TTATTTCTGA 61 CACATTAGTA GGTCTTACCC AATTCTTCAC TGTCTCAATC TTAGAAGGAT CCACCATCAC 121 TCCATCCTTA GAAACCACGT TCCCCAAGAA GGACACTACA TCTAGCCAAA ACTCACACTT 181 AGAGAACTTG GCATAAAACT TTTTCTCCCT CAACATTTCC AATACCATTC TCAAATGCTC 241 TTCATGTTCC TCCTTACTTT TAGAGTATAT CAGTATATCA TCAATAAATA CGATCACAAA 301 GAGATCCAAA TATGGCTTAA AAATCCCTTT TATTAAACTC ATAAACGCAG CAGGGGCATT 361 CATAAGACCA AAAGACATCA CTACAAATTT GTAATGCCCA TACCTGGTTC TAAAAGCAGT 421 CTTTGGCACA TCCGTTGCCC GTATTTTCAA TTGATGATAA CCGGATCTCA AGTCAATCTT 481 AGAAAAGACA CAAGCACCTT GTAACTGATC GAACAAGTCA TTAATGCGAG GAAGAGGATA 541 CTTGTTCTTT ATGGTTACCT TGTTNCACTG CCGGTAGCCT ATGCACATCC GAAAACTCCA 601 ATCCTTCTTC TTTACAAACA AAACCGGAGC ACCCCAAGGA GATGCAGTTG GTCTAATGAA 661 GCCTTTGCTC ACAACTCTTT GAAGTGGTCT TTTAACTCTC TTAACTCTGC GG Predicted gene structure (within gDNA segment 62240 to 57979): Exon 1 60766 60055 ( 712 n); cDNA 2 712 ( 711 n); score: 0.857 MATCH C08HBa0294K15.1- SGN-E379315+ 0.857 712 1.000 C PGS_C08HBa0294K15.1-_SGN-E379315+ (60766 60055) Alignment (genomic DNA sequence = upper lines): AATCCCTCGA TAAATCGATG GTAGTAGCTA GCTAAACCAA CAAAGCTACT TACCTCTGTA 60707 ||||||| || |||||| | |||||||||| ||||| |||| ||||||| || || |||| AATCCCTTGA CAAATCGGCG GTAGTAGCTA GCTAACCCAA CAAAGCTCCT TATTTCTGAC 61 ACATTAGTAG GTCTTTCCCA ACTCTTCACT GCTTCGATCT TAGAAGGATC CACAATCACT 60647 |||||||||| ||||| |||| | |||||||| | || |||| |||||||||| ||| |||||| ACATTAGTAG GTCTTACCCA ATTCTTCACT GTCTCAATCT TAGAAGGATC CACCATCACT 121 CCATCCTTAG AAACCACATG CCCCAAGAAG GACACTGAAT CTAGCCAAAA CTCACACTTG 60587 |||||||||| ||||||| | |||||||||| |||||| || |||||||||| ||||||||| CCATCCTTAG AAACCACGTT CCCCAAGAAG GACACTACAT CTAGCCAAAA CTCACACTTA 181 GAGAATTTGG CATTAAGCTT TTTCTCCCTC AACATTTCCA ATACCATTCT CAAGTGCTCC 60527 ||||| |||| ||| || ||| |||||||||| |||||||||| |||||||||| ||| ||||| GAGAACTTGG CATAAAACTT TTTCTCCCTC AACATTTCCA ATACCATTCT CAAATGCTCT 241 TCATGTTCTT TCTTGCTCTT TGAGTATACC AGTATATCAT CAACGAATAC AATGACAAAG 60467 |||||||| | ||| || || ||||||| | |||||||||| ||| ||||| || |||||| TCATGTTCCT CCTTACTTTT AGAGTATATC AGTATATCAT CAATAAATAC GATCACAAAG 301 AGATCTAGAT ATGGATTAAA GATTCCGTTC ATCAAGCTCA TGAACGCAGC AGGGGCATTC 60407 ||||| | || |||| ||||| || || || || || |||| | |||||||| |||||||||| AGATCCAAAT ATGGCTTAAA AATCCCTTTT ATTAAACTCA TAAACGCAGC AGGGGCATTC 361 GTAAGCCCAA AAGACATTAC TAAGAACTCG TAATACCCAT ATCTTGTTCG AAAAGCAGTC 60347 |||| |||| ||||||| || || || | | |||| ||||| | || |||| |||||||||| ATAAGACCAA AAGACATCAC TACAAATTTG TAATGCCCAT ACCTGGTTCT AAAAGCAGTC 421 TTGGGCACAT TCGTTGCCCA TATTTTCAAT TGATGATAAC CAGATCTCAA ATCAATTTTT 60287 || ||||||| |||||||| |||||||||| |||||||||| | |||||||| ||||| || TTTGGCACAT CCGTTGCCCG TATTTTCAAT TGATGATAAC CGGATCTCAA GTCAATCTTA 481 GAGAAGGTAC AAGCACCTTG TAACTGATCG AACAAATCAT CGATGTGAGG AAGAGGATAC 60227 || ||| || |||||||||| |||||||||| ||||| |||| ||| |||| |||||||||| GAAAAGACAC AAGCACCTTG TAACTGATCG AACAAGTCAT TAATGCGAGG AAGAGGATAC 541 TTGTTCTTAA CAGTTACCTT ATTCAGTTGT CTGTAGTCAA TGCACATCCG AAAACTTCCA 60167 |||||||| | |||||||| || || | |||| | | |||||||||| |||||| | | TTGTTCTTTA TGGTTACCTT GTTNCACTGC CGGTAGCCTA TGCACATCCG AAAACTCCAA 601 TCCTTCTTCT TCACAAACAA AACAGGAGTA CCCCAAGGGG ATGCACTTGG TCTAATAAAA 60107 |||||||||| | |||||||| ||| |||| | |||||||| | ||||| |||| |||||| || TCCTTCTTCT TTACAAACAA AACCGGAGCA CCCCAAGGAG ATGCAGTTGG TCTAATGAAG 661 CCTTTCCCTA ACAACTCTTG AAGTTGGGCC TTTAACTCTC TTAACTCAGC GG 60055 ||||| || ||||||||| | ||| | |||||||||| ||||||| || || CCTTT-GCTC ACAACTCTTT GAAGTGGTCT TTTAACTCTC TTAACTCTGC GG 712 hqPGS_C08HBa0294K15.1-_SGN-E379315+ (60766 60055) ******************************************************************************** EST sequence 104 +strand 596 n (File: SGN-E375319+) 1 GAATCCCTTG ACAAATCGGC GGTAGTAGCT AGCTAACCCA ACAAAGCTCC TTATTTCTGA 61 CACATTAGTA GGTCTTACCC AATTCTTCAC TGTCTCAATC TTAGAAGGAT CCACCATCAC 121 TCCATCCTTA GAAACCACGT TCCCCAAGAA GGACACTACA TCTAGCCAAA ACTCACACTT 181 AGAGAACTTG GCATAAAACT TTTTCTCCCT CAACATTTCC AATACCATTC TCAAATGCTC 241 TTCATGTTCC TCCTTACTTT TAGAGTATAT CAGTATATCA TCAATAAATA CGATCACAAA 301 GAGATCCAAA TATGGCTTAA AAATCCCTTT TATTAAACTC ATAAACGCAG CAGGGGCATT 361 CATAAGACCA AAAGACATCA CTACAAATTT GTAATGCCCA TACCTGGTTC TAAAAGCAGT 421 CTTTGGCACA TCCGTTGCCC GTATTTTCAA TTGATGATAA CCGGATCTCA AGTCAATCTT 481 AGAAAAGACA CAAGCACCTT GTAACTGATC GAACAAGTCA TTAATGCGAG GAAGAGGATA 541 CTTGTTCTTT ATGGTTACCT TGTTCAACTG CCGGTAGCCT ATGCACATCC GAAAAC Predicted gene structure (within gDNA segment 62240 to 59139): Exon 1 60766 60172 ( 595 n); cDNA 2 596 ( 595 n); score: 0.864 MATCH C08HBa0294K15.1- SGN-E375319+ 0.864 595 0.998 C PGS_C08HBa0294K15.1-_SGN-E375319+ (60766 60172) Alignment (genomic DNA sequence = upper lines): AATCCCTCGA TAAATCGATG GTAGTAGCTA GCTAAACCAA CAAAGCTACT TACCTCTGTA 60707 ||||||| || |||||| | |||||||||| ||||| |||| ||||||| || || |||| AATCCCTTGA CAAATCGGCG GTAGTAGCTA GCTAACCCAA CAAAGCTCCT TATTTCTGAC 61 ACATTAGTAG GTCTTTCCCA ACTCTTCACT GCTTCGATCT TAGAAGGATC CACAATCACT 60647 |||||||||| ||||| |||| | |||||||| | || |||| |||||||||| ||| |||||| ACATTAGTAG GTCTTACCCA ATTCTTCACT GTCTCAATCT TAGAAGGATC CACCATCACT 121 CCATCCTTAG AAACCACATG CCCCAAGAAG GACACTGAAT CTAGCCAAAA CTCACACTTG 60587 |||||||||| ||||||| | |||||||||| |||||| || |||||||||| ||||||||| CCATCCTTAG AAACCACGTT CCCCAAGAAG GACACTACAT CTAGCCAAAA CTCACACTTA 181 GAGAATTTGG CATTAAGCTT TTTCTCCCTC AACATTTCCA ATACCATTCT CAAGTGCTCC 60527 ||||| |||| ||| || ||| |||||||||| |||||||||| |||||||||| ||| ||||| GAGAACTTGG CATAAAACTT TTTCTCCCTC AACATTTCCA ATACCATTCT CAAATGCTCT 241 TCATGTTCTT TCTTGCTCTT TGAGTATACC AGTATATCAT CAACGAATAC AATGACAAAG 60467 |||||||| | ||| || || ||||||| | |||||||||| ||| ||||| || |||||| TCATGTTCCT CCTTACTTTT AGAGTATATC AGTATATCAT CAATAAATAC GATCACAAAG 301 AGATCTAGAT ATGGATTAAA GATTCCGTTC ATCAAGCTCA TGAACGCAGC AGGGGCATTC 60407 ||||| | || |||| ||||| || || || || || |||| | |||||||| |||||||||| AGATCCAAAT ATGGCTTAAA AATCCCTTTT ATTAAACTCA TAAACGCAGC AGGGGCATTC 361 GTAAGCCCAA AAGACATTAC TAAGAACTCG TAATACCCAT ATCTTGTTCG AAAAGCAGTC 60347 |||| |||| ||||||| || || || | | |||| ||||| | || |||| |||||||||| ATAAGACCAA AAGACATCAC TACAAATTTG TAATGCCCAT ACCTGGTTCT AAAAGCAGTC 421 TTGGGCACAT TCGTTGCCCA TATTTTCAAT TGATGATAAC CAGATCTCAA ATCAATTTTT 60287 || ||||||| |||||||| |||||||||| |||||||||| | |||||||| ||||| || TTTGGCACAT CCGTTGCCCG TATTTTCAAT TGATGATAAC CGGATCTCAA GTCAATCTTA 481 GAGAAGGTAC AAGCACCTTG TAACTGATCG AACAAATCAT CGATGTGAGG AAGAGGATAC 60227 || ||| || |||||||||| |||||||||| ||||| |||| ||| |||| |||||||||| GAAAAGACAC AAGCACCTTG TAACTGATCG AACAAGTCAT TAATGCGAGG AAGAGGATAC 541 TTGTTCTTAA CAGTTACCTT ATTCAGTTGT CTGTAGTCAA TGCACATCCG AAAAC 60172 |||||||| | |||||||| |||| || | |||| | | |||||||||| ||||| TTGTTCTTTA TGGTTACCTT GTTCAACTGC CGGTAGCCTA TGCACATCCG AAAAC 596 hqPGS_C08HBa0294K15.1-_SGN-E375319+ (60766 60172) ******************************************************************************** EST sequence 73 +strand 737 n (File: SGN-E578078+) 1 GAACTCATAA TGCTCATACC TGGTCCGAAA AGCAGTCTTG GGCACATCTG CTGCTCGTAT 61 TTTCAATTGA TGATAACCAG ATCTCAAGTC GATTTTTGAG AAGGTACAAG CACCTTGTAA 121 CTGATCGAAC AAATCATCAA TGTGAGGAAG ATATTTTCGA AAATTCTCTC ACTATGGTGA 181 TTGACTCAAT TGGAGGAATA TCGGACTCAA GATCTTTGAC TCTTACAATA TGGTAAATTC 241 ACACTTTTGA GATTATTTTG CAATATTTTA AACAAGAGAT GATATGACCT TTAGGAATTA 301 AATTACTGCC ATTCCACTCT AAGACAGGTT CATTAGGAAA GTTGAATTTA ACAACTCTTG 361 TTCGACAGTC TATGGAAGCA TAACAAGCAT GCAACCAATC CATTCCCAAG ATAAAATAAA 421 AATCGACCAT ATCGAATTCC ACCAAATCCA CCCAAGTAAC TCTATTGGGG AAATATATAG 481 GATAACTCCT AAAGACTCTT CTAGCAACAA TGGAGTCACC TACCGGGGTT GTAACAAAAA 541 ATATTTTCTC AAAGGCCTGG CGTCGAATAT GAAGAGACAT ACTCACCCGT TATGGATGCA 601 ATAACATTGG TTTATCTCAT TAGTTTCACA GTCCATGAGC AACTTGAAAT GCATTTGATG 661 GATGTGGTTA CAACCTACCT TTATGGATCA TTTAAATATG AGATATACAT GAAAATTCCT 721 GAAGGATTTG CGATTGC Predicted gene structure (within gDNA segment 61208 to 53646): Exon 1 60383 60232 ( 152 n); cDNA 1 152 ( 152 n); score: 0.901 Intron 1 60231 59948 ( 284 n); Pd: 0.000 (s: 0.96), Pa: 0.000 (s: 0.64) Exon 2 59947 59564 ( 384 n); cDNA 153 536 ( 384 n); score: 0.547 MATCH C08HBa0294K15.1- SGN-E578078+ 0.647 536 0.727 C PGS_C08HBa0294K15.1-_SGN-E578078+ (60383 60232,59947 59564) Alignment (genomic DNA sequence = upper lines): GAACTCGTAA TACCCATATC TTGTTCGAAA AGCAGTCTTG GGCACATTCG TTGCCCATAT 60324 |||||| ||| | | |||| | | || ||||| |||||||||| ||||||| | ||| | ||| GAACTCATAA TGCTCATACC TGGTCCGAAA AGCAGTCTTG GGCACATCTG CTGCTCGTAT 60 TTTCAATTGA TGATAACCAG ATCTCAAATC AATTTTTGAG AAGGTACAAG CACCTTGTAA 60264 |||||||||| |||||||||| ||||||| || ||||||||| |||||||||| |||||||||| TTTCAATTGA TGATAACCAG ATCTCAAGTC GATTTTTGAG AAGGTACAAG CACCTTGTAA 120 CTGATCGAAC AAATCATCGA TGTGAGGAAG AGGATACTTG TTCTTAACAG TTACCTTATT 60204 |||||||||| |||||||| | |||||||||| | CTGATCGAAC AAATCATCAA TGTGAGGAAG AT........ .......... .......... 152 CAGTTGTCTG TAGTCAATGC ACATCCGAAA ACTTCCATCC TTCTTCTTCA CAAACAAAAC 60144 .......... .......... .......... .......... .......... .......... 152 AGGAGTACCC CAAGGGGATG CACTTGGTCT AATAAAACCT TTCCCTAACA ACTCTTGAAG 60084 .......... .......... .......... .......... .......... .......... 152 TTGGGCCTTT AACTCTCTTA ACTCAGCGGG AGCCATTCTA TAAGGGGGTA TGGAAATGGG 60024 .......... .......... .......... .......... .......... .......... 152 GCGAGTACCC GGCTCCAGAT CAATACAGAA ATCAATATCT CTATCTGGTG GCATACCAGA 59964 .......... .......... .......... .......... .......... .......... 152 AAGGTCTGCA GGAAACACAT CCAAAAACTC ACGGACTATC GAAACCGACT CAATTGAAGG 59904 | | | |||| || | ||||| | | |||| |||||| ||| .......... ......ATTT TCGAAAATTC TCTCACTATG GTGATTGACT CAATTGGAGG 196 TACTTGGGTA GTATCATCCC TGAGGTGTGC CAAGAAAGCT AA-ACACCCT TTACTAACCA 59845 | | || | ||| ||| | | ||| | | || ||| || || | | AATATCGGAC TCAAGATCTT TGA-CTCTTA CAATATGGTA AATTCACACT TTTGAGATTA 255 TTCTCTTAGC ACGAAGAAAT GAGATGATAC GAACTGGA-G TGGGAGTGTA GTCACCCTCC 59786 || | | | | | ||||||||| || || | | | || | || | | TTTTGCAATA TTTTAAACAA GAGATGATAT GACCTTTAGG AATTAAATTA CT-GCCATTC 314 CACACTAACG GATCTGTCTC AGGCTTGGCC AATGTCACAG TTTTGGCATT ACAGTCTAAG 59726 ||| |||| | | | ||| | ||| | ||| | | | |||||||| | CACTCTAAGA CAGGTTCATT AGGAAAGTTG AATTTAACAA CTCTTGTTCG ACAGTCTATG 374 ATTGCAAAGT TTGGAGAAAG CCAAGTCATA CCCAGAATTA CATCGAAATC AACCATTTCT 59666 ||| | | | | |||| ||| |||| || | || ||||| ||||| || GAAGCATAAC AAGCATGCAA CCAATCCATT CCCAAGATAA AATAAAAATC GACCATATCG 434 AAGATAACCA AGTCTACATG AGTATTACTC CCCATAAAAG TCACAAGACA AGACCTATAC 59606 || |||| | || || |||| || ||| | | || | | |||| | AATTCCACCA AATCCACCCA AGTAACTCTA TTGGGGAAAT ATATAGGATA ACTCCTAAAG 494 ACCTTTTCAA CTATCACAGA CTCACCCACC GGAGTAGAAA CA 59564 || || | | | | || ||||| ||| || || | || || ACTCTTCTAG CAACAATGGA GTCACCTACC GGGGTTGTAA CA 536 hqPGS_C08HBa0294K15.1-_SGN-E578078+ (60383 60232) ******************************************************************************** EST sequence 94 +strand 526 n (File: SGN-E204434+) 1 GAATCCCTTG ACAAATCGGC GGTAGTAGCT AGCTAACCCA ACAAAGCTCC TTATTTCTGA 61 CACATTAGTA GGTCTTACCC AATTCTTCAC TGTCTCAATC TTAGAAGGAT CCACCATCAC 121 TCCATCCTTA GAAACCACGT TCCCCAAGAA GGACACTACA TCTAGCCAAA ACTCACACTT 181 AGAGAACTTG GCATAAAACT TTTTCTCCCT CAACATTTCC AATACCATTC TCAAATGCTC 241 TTCATGTTCC TCCTTACTTT TAGAGTATAT CAGTATATCA TCAATAAATA CGATCACAAA 301 GAGATCCAAA TATGGCTTAA AAATCCCTTT TATTAAACTC ATAAACGCAG CAGGGGCATT 361 CATAAGACCA AAAGACATCA CTACAAATTT GTAATGCCCA TACCTGGTTC TAAAAGCAGT 421 CTTTGGCACA TCCGTTGCCC GTATTTTCAA TTGATGATAA CCGGATCTCA AGTCAATCTT 481 AGAAAAGACA CAAGCACCTT GTAACTGATC GAACAAGTCA TTAATG Predicted gene structure (within gDNA segment 62240 to 57004): Exon 1 60766 60242 ( 525 n); cDNA 2 526 ( 525 n); score: 0.867 MATCH C08HBa0294K15.1- SGN-E204434+ 0.867 525 0.998 C PGS_C08HBa0294K15.1-_SGN-E204434+ (60766 60242) Alignment (genomic DNA sequence = upper lines): AATCCCTCGA TAAATCGATG GTAGTAGCTA GCTAAACCAA CAAAGCTACT TACCTCTGTA 60707 ||||||| || |||||| | |||||||||| ||||| |||| ||||||| || || |||| AATCCCTTGA CAAATCGGCG GTAGTAGCTA GCTAACCCAA CAAAGCTCCT TATTTCTGAC 61 ACATTAGTAG GTCTTTCCCA ACTCTTCACT GCTTCGATCT TAGAAGGATC CACAATCACT 60647 |||||||||| ||||| |||| | |||||||| | || |||| |||||||||| ||| |||||| ACATTAGTAG GTCTTACCCA ATTCTTCACT GTCTCAATCT TAGAAGGATC CACCATCACT 121 CCATCCTTAG AAACCACATG CCCCAAGAAG GACACTGAAT CTAGCCAAAA CTCACACTTG 60587 |||||||||| ||||||| | |||||||||| |||||| || |||||||||| ||||||||| CCATCCTTAG AAACCACGTT CCCCAAGAAG GACACTACAT CTAGCCAAAA CTCACACTTA 181 GAGAATTTGG CATTAAGCTT TTTCTCCCTC AACATTTCCA ATACCATTCT CAAGTGCTCC 60527 ||||| |||| ||| || ||| |||||||||| |||||||||| |||||||||| ||| ||||| GAGAACTTGG CATAAAACTT TTTCTCCCTC AACATTTCCA ATACCATTCT CAAATGCTCT 241 TCATGTTCTT TCTTGCTCTT TGAGTATACC AGTATATCAT CAACGAATAC AATGACAAAG 60467 |||||||| | ||| || || ||||||| | |||||||||| ||| ||||| || |||||| TCATGTTCCT CCTTACTTTT AGAGTATATC AGTATATCAT CAATAAATAC GATCACAAAG 301 AGATCTAGAT ATGGATTAAA GATTCCGTTC ATCAAGCTCA TGAACGCAGC AGGGGCATTC 60407 ||||| | || |||| ||||| || || || || || |||| | |||||||| |||||||||| AGATCCAAAT ATGGCTTAAA AATCCCTTTT ATTAAACTCA TAAACGCAGC AGGGGCATTC 361 GTAAGCCCAA AAGACATTAC TAAGAACTCG TAATACCCAT ATCTTGTTCG AAAAGCAGTC 60347 |||| |||| ||||||| || || || | | |||| ||||| | || |||| |||||||||| ATAAGACCAA AAGACATCAC TACAAATTTG TAATGCCCAT ACCTGGTTCT AAAAGCAGTC 421 TTGGGCACAT TCGTTGCCCA TATTTTCAAT TGATGATAAC CAGATCTCAA ATCAATTTTT 60287 || ||||||| |||||||| |||||||||| |||||||||| | |||||||| ||||| || TTTGGCACAT CCGTTGCCCG TATTTTCAAT TGATGATAAC CGGATCTCAA GTCAATCTTA 481 GAGAAGGTAC AAGCACCTTG TAACTGATCG AACAAATCAT CGATG 60242 || ||| || |||||||||| |||||||||| ||||| |||| ||| GAAAAGACAC AAGCACCTTG TAACTGATCG AACAAGTCAT TAATG 526 hqPGS_C08HBa0294K15.1-_SGN-E204434+ (60766 60242) ******************************************************************************** EST sequence 152 +strand 358 n (File: SGN-E240817+) 1 GTCTCACCCA TTTCTTCACT GTCTCAATCT TACCAGGATC CACCATCACT CCATCCTTAG 61 AAACCACGTG CCCCAAGAAG GACACTGCAT CTATCCAAAA CTCACACTTA GAGAACTTGG 121 CATAAAGCTT TTTCTCCCTC AACATTTCTA ATACAATTCT CAAATGCTCC TCATGTTCCT 181 TCTTACTATT AGAGGATATC AGTATATCAT CAATGAACAT GATGACGCAG AGATCCAAAT 241 ATGGCTTAAA ATCCCGTTCA TCAAGCTCAT GAACGCAGCA GGGGCATTCG TAAGACCAAA 301 AGACATCACT ACAAATTCGT AATGCCCATA CCTGGTTCTA AAAGCAGTCT TTGGCACA Predicted gene structure (within gDNA segment 61692 to 59152): Exon 1 60696 60338 ( 359 n); cDNA 1 358 ( 358 n); score: 0.872 MATCH C08HBa0294K15.1- SGN-E240817+ 0.872 359 1.003 C PGS_C08HBa0294K15.1-_SGN-E240817+ (60696 60338) Alignment (genomic DNA sequence = upper lines): GTCTTTCCCA ACTCTTCACT GCTTCGATCT TAGAAGGATC CACAATCACT CCATCCTTAG 60637 |||| |||| |||||||| | || |||| || |||||| ||| |||||| |||||||||| GTCTCACCCA TTTCTTCACT GTCTCAATCT TACCAGGATC CACCATCACT CCATCCTTAG 60 AAACCACATG CCCCAAGAAG GACACTGAAT CTAGCCAAAA CTCACACTTG GAGAATTTGG 60577 ||||||| || |||||||||| ||||||| || ||| |||||| ||||||||| ||||| |||| AAACCACGTG CCCCAAGAAG GACACTGCAT CTATCCAAAA CTCACACTTA GAGAACTTGG 120 CATTAAGCTT TTTCTCCCTC AACATTTCCA ATACCATTCT CAAGTGCTCC TCATGTTCTT 60517 ||| |||||| |||||||||| |||||||| | |||| ||||| ||| |||||| |||||||| | CATAAAGCTT TTTCTCCCTC AACATTTCTA ATACAATTCT CAAATGCTCC TCATGTTCCT 180 TCTTGCTCTT TGAGTATACC AGTATATCAT CAACGAATAC AATGACAAAG AGATCTAGAT 60457 |||| || || ||| ||| | |||||||||| ||| ||| | ||||| || ||||| | || TCTTACTATT AGAGGATATC AGTATATCAT CAATGAACAT GATGACGCAG AGATCCAAAT 240 ATGGATTAAA GATTCCGTTC ATCAAGCTCA TGAACGCAGC AGGGGCATTC GTAAGCCCAA 60397 |||| ||||| || |||||| |||||||||| |||||||||| |||||||||| ||||| |||| ATGGCTTAAA -ATCCCGTTC ATCAAGCTCA TGAACGCAGC AGGGGCATTC GTAAGACCAA 299 AAGACATTAC TAAGAACTCG TAATACCCAT ATCTTGTTCG AAAAGCAGTC TTGGGCACA 60338 ||||||| || || || ||| |||| ||||| | || |||| |||||||||| || |||||| AAGACATCAC TACAAATTCG TAATGCCCAT ACCTGGTTCT AAAAGCAGTC TTTGGCACA 358 hqPGS_C08HBa0294K15.1-_SGN-E240817+ (60696 60338) ******************************************************************************** EST sequence 126 +strand 587 n (File: SGN-E352950+) 1 CCTCTGTAAG AATAGTGTGA ATCAAATCGT CGGCACGGGG TACACATACC TTTCCCTTAA 61 TCCTCAAAAC ACCTTCCTTA TCGATTTTTG CTTCTTTAGC CTCTCCTCGC ATTACCTTAT 121 CTCGAATCCA GATCAGTTTC TCATCGGTAA ACTGCTTTCC TTTAATCTTA TCAAGAAAGG 181 AAGATCTTGC CTCCACACAA GCCAAAAATT CTCCCTTCTC ATTTAATTCT AGCCTCATAA 241 GGTCATTAGC CAGAGTCTGA ACCTCTCTAG CCAATGGGCA TCTAGAAACC TGCAAGTGAG 301 CTAGACTTCC CATGCTCCCT GCCTTTCTAC TTAAAGCATC TGCCACAACA TTAGCCTTTC 361 CCGGATGATA CAAGATAGTG ATATCATAGT CCTTCAGTAG CTCCATCGAT CTCCTCTGTC 421 TCAAATTCAA ATCTTTCTGA GTAAAGACAT ACTGTAAACT ACGATGATCC ATATAGACTT 481 CACACTTAAC CCCATAGAGA TAATGTCTCT ATTACTTTAA TGCAATCACT ACTGCCGCTA 541 ACTCCAAATC ATGGGTCGGA TAATTACGTT CATGCACCTT TAATTGC Predicted gene structure (within gDNA segment 62217 to 60376): Exon 1 61581 60996 ( 586 n); cDNA 1 586 ( 586 n); score: 0.942 MATCH C08HBa0294K15.1- SGN-E352950+ 0.942 586 0.998 C PGS_C08HBa0294K15.1-_SGN-E352950+ (61581 60996) Alignment (genomic DNA sequence = upper lines): CCTTTGTAAG AATAGTGTGA ATCAAATCAT CGACACGGGG TACACATACC CTTCCCTTAA 61522 ||| |||||| |||||||||| |||||||| | || ||||||| |||||||||| ||||||||| CCTCTGTAAG AATAGTGTGA ATCAAATCGT CGGCACGGGG TACACATACC TTTCCCTTAA 60 TTCTCAAAAC ACCTTCCTCA TCGATTTTTG CTTCTTTAGC CTCTCCTCGC AACACCTTAT 61462 | |||||||| |||||||| | |||||||||| |||||||||| |||||||||| | ||||||| TCCTCAAAAC ACCTTCCTTA TCGATTTTTG CTTCTTTAGC CTCTCCTCGC ATTACCTTAT 120 CTCGGATCCG GATCAGTTTC TCATCGGTAA ACTGTTTTCC TTTAATCTTA TCAAGAAAGG 61402 |||| |||| |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| CTCGAATCCA GATCAGTTTC TCATCGGTAA ACTGCTTTCC TTTAATCTTA TCAAGAAAGG 180 AAGATCTTGC CTCCACACAG GCCAAAAATC CTCCCTTCCC ATTTACTTCT AGCCTCATAA 61342 |||||||||| ||||||||| ||||||||| |||||||| | ||||| |||| |||||||||| AAGATCTTGC CTCCACACAA GCCAAAAATT CTCCCTTCTC ATTTAATTCT AGCCTCATAA 240 AGTCATTAGC CAGAGTCTGA ACCTCTCTAG CCAATGGGCG TCTAGAAACC TGCAAGTGGG 61282 ||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||| | GGTCATTAGC CAGAGTCTGA ACCTCTCTAG CCAATGGGCA TCTAGAAACC TGCAAGTGAG 300 CTAGACTTCC CATGCTCCCT GCCTTTCTAC TTAAAGCATC TGCCACAACA TTAGCTTTTC 61222 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CTAGACTTCC CATGCTCCCT GCCTTTCTAC TTAAAGCATC TGCCACAACA TTAGCCTTTC 360 CCGGATGATA CAAAATAGTG ATATCATAGT CCTTCAGTAG TTCCATCCAC CTTCTCTGTC 61162 |||||||||| ||| |||||| |||||||||| |||||||||| |||||| | || ||||||| CCGGATGATA CAAGATAGTG ATATCATAGT CCTTCAGTAG CTCCATCGAT CTCCTCTGTC 420 TCAAATTCAA ATCTTTCTAA GTAAAGACAT ACAGTAAACT ACGATGATCC GTATAGACTT 61102 |||||||||| |||||||| | |||||||||| || ||||||| |||||||||| ||||||||| TCAAATTCAA ATCTTTCTGA GTAAAGACAT ACTGTAAACT ACGATGATCC ATATAGACTT 480 CACACTTAAC CCCATATAGA TAATGTCTCT ATTGCTTTAA TGCAAACACT ACCGCAGCCA 61042 |||||||||| |||||| ||| |||||||||| ||| |||||| ||||| |||| || || || | CACACTTAAC CCCATAGAGA TAATGTCTCT ATTACTTTAA TGCAATCACT ACTGCCGCTA 540 ACTCCCAATC ATGGGTCGGA TAATTACGTT CATGCACCTT TAATTG 60996 ||||| |||| |||||||||| |||||||||| |||||||||| |||||| ACTCCAAATC ATGGGTCGGA TAATTACGTT CATGCACCTT TAATTG 586 hqPGS_C08HBa0294K15.1-_SGN-E352950+ (61581 60996) ******************************************************************************** EST sequence 146 +strand 587 n (File: SGN-E357100+) 1 CCTCTGTAAG AATAGTGTGA ATCAAATCGT CGGCACGGGG TACACATACC TTTCCCTTAA 61 TCCTCAAAAC ACCTTCCTTA TCGATTTTTG CTTCTTTAGC CTCTCCTCGC ATTACCTTAT 121 CTCGAATCCA GATCAGTTTC TCATCGGTAA ACTGCTTTCC TTTAATCTTA TCAAGAAAGG 181 AAGATCTTGC CTCCACACAA GCCAAAAATT CTCCCTTCTC ATTTAATTCT AGCCTCATAA 241 GGTCATTAGC CAGAGTCTGA ACCTCTCTAG CCAATGGGCA TCTAGAAACC TGCAAGTGAG 301 CTAGACTTCC CATGCTCCCT GCCTTTCTAC TTAAAGCATC TGCCACAACA TTAGCCTTTC 361 CCGGATGATA CAAGATAGTG ATATCATAGT CCTTCAGTAG CTCCATCGAT CTCCTCTGTC 421 TCAAATTCAA ATCTTTCTGA GTAAAGACAT ACTGTAAACT ACGATGATCC ATATAGACTT 481 CACACTTAAC CCCATAGAGA TAATGTCTCT ATTACTTTAA TGCAATCACT ACTGCCGCTA 541 ACTCCAAATC ATGGGTCGGA TAATTACGTT CATGCACCTT TAATTGC Predicted gene structure (within gDNA segment 62217 to 60376): Exon 1 61581 60996 ( 586 n); cDNA 1 586 ( 586 n); score: 0.942 MATCH C08HBa0294K15.1- SGN-E357100+ 0.942 586 0.998 C PGS_C08HBa0294K15.1-_SGN-E357100+ (61581 60996) Alignment (genomic DNA sequence = upper lines): CCTTTGTAAG AATAGTGTGA ATCAAATCAT CGACACGGGG TACACATACC CTTCCCTTAA 61522 ||| |||||| |||||||||| |||||||| | || ||||||| |||||||||| ||||||||| CCTCTGTAAG AATAGTGTGA ATCAAATCGT CGGCACGGGG TACACATACC TTTCCCTTAA 60 TTCTCAAAAC ACCTTCCTCA TCGATTTTTG CTTCTTTAGC CTCTCCTCGC AACACCTTAT 61462 | |||||||| |||||||| | |||||||||| |||||||||| |||||||||| | ||||||| TCCTCAAAAC ACCTTCCTTA TCGATTTTTG CTTCTTTAGC CTCTCCTCGC ATTACCTTAT 120 CTCGGATCCG GATCAGTTTC TCATCGGTAA ACTGTTTTCC TTTAATCTTA TCAAGAAAGG 61402 |||| |||| |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| CTCGAATCCA GATCAGTTTC TCATCGGTAA ACTGCTTTCC TTTAATCTTA TCAAGAAAGG 180 AAGATCTTGC CTCCACACAG GCCAAAAATC CTCCCTTCCC ATTTACTTCT AGCCTCATAA 61342 |||||||||| ||||||||| ||||||||| |||||||| | ||||| |||| |||||||||| AAGATCTTGC CTCCACACAA GCCAAAAATT CTCCCTTCTC ATTTAATTCT AGCCTCATAA 240 AGTCATTAGC CAGAGTCTGA ACCTCTCTAG CCAATGGGCG TCTAGAAACC TGCAAGTGGG 61282 ||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||| | GGTCATTAGC CAGAGTCTGA ACCTCTCTAG CCAATGGGCA TCTAGAAACC TGCAAGTGAG 300 CTAGACTTCC CATGCTCCCT GCCTTTCTAC TTAAAGCATC TGCCACAACA TTAGCTTTTC 61222 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CTAGACTTCC CATGCTCCCT GCCTTTCTAC TTAAAGCATC TGCCACAACA TTAGCCTTTC 360 CCGGATGATA CAAAATAGTG ATATCATAGT CCTTCAGTAG TTCCATCCAC CTTCTCTGTC 61162 |||||||||| ||| |||||| |||||||||| |||||||||| |||||| | || ||||||| CCGGATGATA CAAGATAGTG ATATCATAGT CCTTCAGTAG CTCCATCGAT CTCCTCTGTC 420 TCAAATTCAA ATCTTTCTAA GTAAAGACAT ACAGTAAACT ACGATGATCC GTATAGACTT 61102 |||||||||| |||||||| | |||||||||| || ||||||| |||||||||| ||||||||| TCAAATTCAA ATCTTTCTGA GTAAAGACAT ACTGTAAACT ACGATGATCC ATATAGACTT 480 CACACTTAAC CCCATATAGA TAATGTCTCT ATTGCTTTAA TGCAAACACT ACCGCAGCCA 61042 |||||||||| |||||| ||| |||||||||| ||| |||||| ||||| |||| || || || | CACACTTAAC CCCATAGAGA TAATGTCTCT ATTACTTTAA TGCAATCACT ACTGCCGCTA 540 ACTCCCAATC ATGGGTCGGA TAATTACGTT CATGCACCTT TAATTG 60996 ||||| |||| |||||||||| |||||||||| |||||||||| |||||| ACTCCAAATC ATGGGTCGGA TAATTACGTT CATGCACCTT TAATTG 586 hqPGS_C08HBa0294K15.1-_SGN-E357100+ (61581 60996) ******************************************************************************** EST sequence 110 +strand 554 n (File: SGN-E352647+) 1 CCTCTGTAAG AATAGTGTGA ATCAAATCGT CGGCACGGGG TACACATACC TTTCCCTTAA 61 TCCTCAAAAC ACCTTCCTTA TCGATTTTTG CTTCTTTAGC CTCTCCTCGC ATTACCTTAT 121 CTCGAATCCA GATCAGTTTC TCATCGGTAA ACTGCTTTCC TTTAATCTTA TCAAGAAAGG 181 AAGATCTTGC CTCCACACAA GCCAAAAATT CTCCCTTCTC ATTTAATTCT AGCCTCATAA 241 GGTCATTAGC CAGAGTCTGA ACCTCTCTAG CCAATGGGCA TCTAGAAACC TGCAAGTGAG 301 CTAGACTTCC CATGCTCCCT GCCTTTCTAC TTAAAGCATC TGCCACAACA TTAGCCTTTC 361 CCGGATGATA CAAGATAGTG ATATCATAGT CCTTCAGTAG CTCCATCGAT CTCCTCTGTC 421 TCAAATTCAA ATCTTTCTGA GTAAAGACAT ACTGTAAACT ACGATGATCC ATATAGACTT 481 CACACTTAAA CCCATAGAGA TAATGGCTCT ATTACTTTAA TGCAATCACT ACTGCCGCTA 541 ACTCCAAATC ATGG Predicted gene structure (within gDNA segment 62217 to 59833): Exon 1 61581 61028 ( 554 n); cDNA 1 554 ( 554 n); score: 0.935 MATCH C08HBa0294K15.1- SGN-E352647+ 0.935 554 1.000 C PGS_C08HBa0294K15.1-_SGN-E352647+ (61581 61028) Alignment (genomic DNA sequence = upper lines): CCTTTGTAAG AATAGTGTGA ATCAAATCAT CGACACGGGG TACACATACC CTTCCCTTAA 61522 ||| |||||| |||||||||| |||||||| | || ||||||| |||||||||| ||||||||| CCTCTGTAAG AATAGTGTGA ATCAAATCGT CGGCACGGGG TACACATACC TTTCCCTTAA 60 TTCTCAAAAC ACCTTCCTCA TCGATTTTTG CTTCTTTAGC CTCTCCTCGC AACACCTTAT 61462 | |||||||| |||||||| | |||||||||| |||||||||| |||||||||| | ||||||| TCCTCAAAAC ACCTTCCTTA TCGATTTTTG CTTCTTTAGC CTCTCCTCGC ATTACCTTAT 120 CTCGGATCCG GATCAGTTTC TCATCGGTAA ACTGTTTTCC TTTAATCTTA TCAAGAAAGG 61402 |||| |||| |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| CTCGAATCCA GATCAGTTTC TCATCGGTAA ACTGCTTTCC TTTAATCTTA TCAAGAAAGG 180 AAGATCTTGC CTCCACACAG GCCAAAAATC CTCCCTTCCC ATTTACTTCT AGCCTCATAA 61342 |||||||||| ||||||||| ||||||||| |||||||| | ||||| |||| |||||||||| AAGATCTTGC CTCCACACAA GCCAAAAATT CTCCCTTCTC ATTTAATTCT AGCCTCATAA 240 AGTCATTAGC CAGAGTCTGA ACCTCTCTAG CCAATGGGCG TCTAGAAACC TGCAAGTGGG 61282 ||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||| | GGTCATTAGC CAGAGTCTGA ACCTCTCTAG CCAATGGGCA TCTAGAAACC TGCAAGTGAG 300 CTAGACTTCC CATGCTCCCT GCCTTTCTAC TTAAAGCATC TGCCACAACA TTAGCTTTTC 61222 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CTAGACTTCC CATGCTCCCT GCCTTTCTAC TTAAAGCATC TGCCACAACA TTAGCCTTTC 360 CCGGATGATA CAAAATAGTG ATATCATAGT CCTTCAGTAG TTCCATCCAC CTTCTCTGTC 61162 |||||||||| ||| |||||| |||||||||| |||||||||| |||||| | || ||||||| CCGGATGATA CAAGATAGTG ATATCATAGT CCTTCAGTAG CTCCATCGAT CTCCTCTGTC 420 TCAAATTCAA ATCTTTCTAA GTAAAGACAT ACAGTAAACT ACGATGATCC GTATAGACTT 61102 |||||||||| |||||||| | |||||||||| || ||||||| |||||||||| ||||||||| TCAAATTCAA ATCTTTCTGA GTAAAGACAT ACTGTAAACT ACGATGATCC ATATAGACTT 480 CACACTTAAC CCCATATAGA TAATGTCTCT ATTGCTTTAA TGCAAACACT ACCGCAGCCA 61042 ||||||||| |||||| ||| ||||| |||| ||| |||||| ||||| |||| || || || | CACACTTAAA CCCATAGAGA TAATGGCTCT ATTACTTTAA TGCAATCACT ACTGCCGCTA 540 ACTCCCAATC ATGG 61028 ||||| |||| |||| ACTCCAAATC ATGG 554 hqPGS_C08HBa0294K15.1-_SGN-E352647+ (61581 61028) ******************************************************************************** EST sequence 124 +strand 542 n (File: SGN-E353207+) 1 TCGGCATGTA CTGTTTTCCA AAACTTAGAA GTAAATTGCG TACCTCTATC TGATATGATG 61 GAGAGTGGAA CTCCGTGCAA TCGAACAATT TCTAAGATGT AAAGTTTGGC TAACTTCTCT 121 GCATTGTAAG TCACCTTAAC CGAAATAGAG TGAGCAGACT TAGTTAATCT GTCAACAATC 181 ACCCAAATAG AGTCATACCT ACCCATCGTC TTTGGATGAC TAACCACGAA GTCCATTGCA 241 ATTCTCTCCC ACTTCCATTC AGGAATGGGC ATTCTCTGAA GTGTCCCTCC AGGCCTCTGG 301 TGTTCATACT TTACTTGCTG ACAATTCGGG CATTGAGCAA CAAAATTAAC AATGTCACGC 361 TTCATCCTAC TCCACCAAAA ATGTTGCTTT AGGTCACGAT ACATCTTGTT TGCACCAGGA 421 TGTATAGAGT ACTTCGAACT ATGAGCCTAT ATAAGAATAG TGTGAATCAA ATCATCGACG 481 CGGGGTACAC ATACTCCTTC CCTTATTCTC AAAACACCTT CCTCATCGAT TTTTGCTTCT 541 TT Predicted gene structure (within gDNA segment 63301 to 60875): Exon 1 62026 61485 ( 542 n); cDNA 1 542 ( 542 n); score: 0.927 MATCH C08HBa0294K15.1- SGN-E353207+ 0.927 542 1.000 C PGS_C08HBa0294K15.1-_SGN-E353207+ (62026 61485) Alignment (genomic DNA sequence = upper lines): TCAGCATGCA ATGTTTTCCA AAACATAGAA GTAAACTGCG TACCCCTATT TGATATAATG 61967 || ||||| | ||||||||| |||| ||||| ||||| |||| |||| |||| |||||| ||| TCGGCATGTA CTGTTTTCCA AAACTTAGAA GTAAATTGCG TACCTCTATC TGATATGATG 60 GAAAGTGGAA CTCCATGCAA TCGAACAATT TCTGAGATGT AAAGTTTGGC CAACTTCTCT 61907 || ||||||| |||| ||||| |||||||||| ||| |||||| |||||||||| ||||||||| GAGAGTGGAA CTCCGTGCAA TCGAACAATT TCTAAGATGT AAAGTTTGGC TAACTTCTCT 120 GCATTATAAG TCACCTTGAC CGGAATGAAA TGAGCAGACT TAGTTAATTT GTCAACAATT 61847 ||||| |||| ||||||| || || ||| | |||||||||| |||||||| | ||||||||| GCATTGTAAG TCACCTTAAC CGAAATAGAG TGAGCAGACT TAGTTAATCT GTCAACAATC 180 ACCCAAATGG AGTCATACTT ACCCATTGTC TTTGGAAGAC CAACCACGAA GTCCATTGCA 61787 |||||||| | |||||||| | |||||| ||| |||||| ||| ||||||||| |||||||||| ACCCAAATAG AGTCATACCT ACCCATCGTC TTTGGATGAC TAACCACGAA GTCCATTGCA 240 ATTCTCTCCC ACTTCCATTC AGGAATGGAC ATTCTCTGAA GTGTCCCTCC AGGCCTCTGG 61727 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| ATTCTCTCCC ACTTCCATTC AGGAATGGGC ATTCTCTGAA GTGTCCCTCC AGGCCTCTGG 300 TGTTCATACT TTACTTGCTG ACAATTCGGG CATTGAGCAA CAAAATCAAC AATGTCACGC 61667 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| TGTTCATACT TTACTTGCTG ACAATTCGGG CATTGAGCAA CAAAATTAAC AATGTCACGC 360 TTCATCCTAC TCCACAAAAA ATGTTGCTTT AGATCACGAT ACATCTTGGT TGCACCAGGA 61607 |||||||||| ||||| |||| |||||||||| || ||||||| |||||||| | |||||||||| TTCATCCTAC TCCACCAAAA ATGTTGCTTT AGGTCACGAT ACATCTTGTT TGCACCAGGA 420 TGTATAGAAT ACCTTGAACT ATGAGCCTTT GTAAGAATAG TGTGAATCAA ATCATCGACA 61547 |||||||| | || | ||||| |||||||| | ||||||||| |||||||||| ||||||||| TGTATAGAGT ACTTCGAACT ATGAGCCTAT ATAAGAATAG TGTGAATCAA ATCATCGACG 480 CGGGGTACAC ATAC-CCTTC CCTTAATTCT CAAAACACCT TCCTCATCGA TTTTTGCTTC 61488 |||||||||| |||| ||||| |||| ||||| |||||||||| |||||||||| |||||||||| CGGGGTACAC ATACTCCTTC CCTT-ATTCT CAAAACACCT TCCTCATCGA TTTTTGCTTC 539 TTT 61485 ||| TTT 542 hqPGS_C08HBa0294K15.1-_SGN-E353207+ (62026 61485) ******************************************************************************** EST sequence 75 +strand 654 n (File: SGN-E578131+) 1 GTAAACTGCA TACCTCTATC TGATATGATG GAGAGTGGAA CTCCATGCAA TCGAACGATT 61 TCTGAGATAT AGATTCTGAC TAACTTCTCT ACATTGTAGG TCACCTTGAC CGGAATGCAA 121 TGAGCAGACT TAGTCAATCT GTCAACAATT ACACAAATGG AGTCATACTT ACCCATTGTC 181 TTTGGAAGGC CAACCACGAA GTCCATTGCA ATTCTCTCCC ACTTCCATTC AGGAATGGGC 241 ATTCTCTGAA GTGTCCGTCC AGGCCTTTGC TGTTCATACT TTACATGCTG ACCATTCGGT 301 TAGAAATGCT AATGGACGCT ACTTTCCCAC TAGTTCAAAA TTTGTGAAGC CACGGGCTTG 361 CTTGAAGATT GGTCTTGGTC TCTTAACAAA ACAGATCCGC TGATATGTTT CTAATTATGC 421 AGAGGATTTT GCAAGAAAGA GTTGTTAGTA GCCGGGAAGC TGAACTCAAT AGATTGAAGC 481 AGGAGAGACG AGAAAGGATC AGCCAGATAA TTCAATCAAG GAAGCAGGAG AGGGAAGCTA 541 AGAGGAAAAT GTTATTCTTT CTGCGAACTG AGGAGGAGCG TCAAAAGAGG TTACTGGAAG 601 AGGAGGAAGC CCGCAAACGT GAAGGTTCTC CTGTGGGAAG CCGGACTTGC TAAG Predicted gene structure (within gDNA segment 63487 to 57151): Exon 1 61996 61698 ( 299 n); cDNA 1 299 ( 299 n); score: 0.913 MATCH C08HBa0294K15.1- SGN-E578131+ 0.913 299 0.457 C PGS_C08HBa0294K15.1-_SGN-E578131+ (61996 61698) Alignment (genomic DNA sequence = upper lines): GTAAACTGCG TACCCCTATT TGATATAATG GAAAGTGGAA CTCCATGCAA TCGAACAATT 61937 ||||||||| |||| |||| |||||| ||| || ||||||| |||||||||| |||||| ||| GTAAACTGCA TACCTCTATC TGATATGATG GAGAGTGGAA CTCCATGCAA TCGAACGATT 60 TCTGAGATGT AAAGTTTGGC CAACTTCTCT GCATTATAAG TCACCTTGAC CGGAATGAAA 61877 |||||||| | | | | || | ||||||||| |||| || | |||||||||| ||||||| || TCTGAGATAT AGATTCTGAC TAACTTCTCT ACATTGTAGG TCACCTTGAC CGGAATGCAA 120 TGAGCAGACT TAGTTAATTT GTCAACAATT ACCCAAATGG AGTCATACTT ACCCATTGTC 61817 |||||||||| |||| ||| | |||||||||| || ||||||| |||||||||| |||||||||| TGAGCAGACT TAGTCAATCT GTCAACAATT ACACAAATGG AGTCATACTT ACCCATTGTC 180 TTTGGAAGAC CAACCACGAA GTCCATTGCA ATTCTCTCCC ACTTCCATTC AGGAATGGAC 61757 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | TTTGGAAGGC CAACCACGAA GTCCATTGCA ATTCTCTCCC ACTTCCATTC AGGAATGGGC 240 ATTCTCTGAA GTGTCCCTCC AGGCCTCTGG TGTTCATACT TTACTTGCTG ACAATTCGG 61698 |||||||||| |||||| ||| |||||| || |||||||||| |||| ||||| || |||||| ATTCTCTGAA GTGTCCGTCC AGGCCTTTGC TGTTCATACT TTACATGCTG ACCATTCGG 299 hqPGS_C08HBa0294K15.1-_SGN-E578131+ (61996 61698) ******************************************************************************** EST sequence 46 -strand 763 n (File: SGN-E354383-) 1 AGAGAGTCGA TTTTCATATC CAAATTCAGA AATTCTAAGT ATGCTGAAAC GATGCACCTT 61 CGACGGGCCG TCGTGCCTGT GACGGTCCGT CGCAGTGCCC GTGGTCTTGG CCAGTTTTTC 121 CAGAATTAAA ATCTGCTGCT CAAAACGACT AAACAGGTCG TTACAATAGA TACCAATTTA 181 CCCATCGTTC GTCCCCGAAC GATCAAATGA AGAAAAACAA TGGCGAAAAG GAGTACCTGA 241 ATCTGTAAAC AGATGTGGGT ATTTTTCTTG CATATCTGCC TCCTTCTCCC AAGTAGCTTC 301 TTCAACCGGT CGATTCTTCC ATTGAACTTT GATGGATGCA ATTTCTCTCG ACCTCAACTT 361 GCGAACCTCT CTATCTAAAA TAGCAACTGG TTCCTCCTCA TAAGTCCAAT TCTCACCAAG 421 CGAAACTGAA TCCCAACGGA TGATGTAGTT TCCATCTCCA TGGTATCTTT TCAACATGGA 481 TACATGAAAT ACCGGATGTA CTCCGGACAG CCCTGGAGGT AAGGCTAATT CATAAGCCAC 541 CTCCCCTACT CGCTTTAGTA CCTCAAATGG TCCAATATAC CTTGGACTTA ACTTACCTCT 601 TTTACGAAAC CGCATCACCC CTTTCATTGG CGAGACTTTC AACAAGACTT GTTCGCCCTC 661 CATGAACTCT AAGTCTCTAA CCTTTCGATC TGCATATTCT TTTTGTCTAC TTTGCGCCGC 721 TAGAAGCTTT TCTTGAATAG ACTTCACTTT CTCCATCGAA TCT Predicted gene structure (within gDNA segment 64895 to 61151): Exon 1 62990 62338 ( 653 n); cDNA 81 734 ( 654 n); score: 0.858 MATCH C08HBa0294K15.1- SGN-E354383- 0.858 653 0.856 C PGS_C08HBa0294K15.1-_SGN-E354383- (62990 62338) Alignment (genomic DNA sequence = upper lines): GACGGTCCGT CGTGGGATCC GTCGACCCAG ACAACTATTA CTAGAA-TAA ACTCTACTGC 62932 |||||||||| || | || || | | | | | | || | |||| ||| | ||| |||| GACGGTCCGT CGCAGTGCCC GT-GGTCTTG GCCAGTTTTT CCAGAATTAA AATCTGCTGC 139 TCAAAACGAC T-AACAGGTC GTTACAATAG ATACCAATTT ACCCATCGTT TGTCCCCGAA 62873 |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| ||||||||| TCAAAACGAC TAAACAGGTC GTTACAATAG ATACCAATTT ACCCATCGTT CGTCCCCGAA 199 CGATCACAAG AAGAAAAACA AGGGCGAAAA GGAGTACCTG AATCTGTAAA CAGGTGTGGG 62813 |||||| | | |||||||||| | |||||||| |||||||||| |||||||||| ||| |||||| CGATCAAATG AAGAAAAACA ATGGCGAAAA GGAGTACCTG AATCTGTAAA CAGATGTGGG 259 TATTTTTCTT GCATATCAGC CTCCTTCTCC CAAGTGGACT TTTCAATTGG TCGATTCTTC 62753 |||||||||| ||||||| || |||||||||| ||||| | | ||||| || |||||||||| TATTTTTCTT GCATATCTGC CTCCTTCTCC CAAGTAGCTT CTTCAACCGG TCGATTCTTC 319 CATTGAACCT TGATGGATGC AATCTCCCTT GACCTCAACT TGCGGACTTC TCTATCTAAA 62693 |||||||| | |||||||||| ||| || || |||||||||| |||| || || |||||||||| CATTGAACTT TGATGGATGC AATTTCTCTC GACCTCAACT TGCGAACCTC TCTATCTAAA 379 ATAGCAACAG ACTCCTCCTC ATAAGATAAA TTCTCATCAA GAAGAACTGA ATCCCAATGA 62633 |||||||| | |||||||| ||||| || |||||| ||| | |||||| ||||||| | ATAGCAACTG GTTCCTCCTC ATAAGTCCAA TTCTCACCAA GCGAAACTGA ATCCCAACGG 439 ATGATGTAGT TTCCATCCCC GTGGTATCTT TTCAACATAG ACACATGAAA TACCAGGTGC 62573 |||||||||| ||||||| || ||||||||| |||||||| | | |||||||| |||| | || ATGATGTAGT TTCCATCTCC ATGGTATCTT TTCAACATGG ATACATGAAA TACCGGATGT 499 ACTCCTGAGA GTCCTGGGGG CAAGGCTAAT TCATAAGCTA CCTCCCCCAC GCGCTTCAGA 62513 ||||| || | | ||||| || ||||||||| |||||||| | ||||||| || ||||| || ACTCCGGACA GCCCTGGAGG TAAGGCTAAT TCATAAGCCA CCTCCCCTAC TCGCTTTAGT 559 ACTTCAAATG GACCAATGTA CCTCGGACTA AGCTTACCTC GCTTACCGAA CCGCATCACC 62453 || ||||||| | ||||| || ||| ||||| | |||||||| |||| || |||||||||| ACCTCAAATG GTCCAATATA CCTTGGACTT AACTTACCTC TTTTACGAAA CCGCATCACC 619 CCTTTCATGG GTGAAACCTT CAGCAAGACT TGTTCACCCT CGATAAACTC CAAGTCTCTA 62393 |||||||| | | || || || || ||||||| ||||| |||| | || ||||| ||||||||| CCTTTCATTG GCGAGACTTT CAACAAGACT TGTTCGCCCT CCATGAACTC TAAGTCTCTA 679 ACCTTTCGAT CTGCATATTC TTCCTGTCTA CTTTGAGCCG CTAAAAGCTT TTCTT 62338 |||||||||| |||||||||| || |||||| ||||| |||| ||| |||||| ||||| ACCTTTCGAT CTGCATATTC TTTTTGTCTA CTTTGCGCCG CTAGAAGCTT TTCTT 734 hqPGS_C08HBa0294K15.1-_SGN-E354383- (62990 62338) ******************************************************************************** EST sequence 15 -strand 542 n (File: SGN-E252199-) 1 CGACCCAGCC TGGGATTACG CAGTCTGTGA CGGTCCGTCC TGCACGTCCG TCACAGAGTT 61 CAGAGACTAG ATTTTTACCA AGGGTCTGTG ACGGCCCATC ACGCCTGTGA CGGTCCGTCC 121 TGCCATTCCG TCACGAAGTT CAGAGAGTCG ATTTCAGTAC CCAAATTTCA GAATTCTAAG 181 TGTTTTGGAA CGAGACCCCC TCGACGGTCC GTCGTGGGAT CCGTCGTCTC AGTCAGTTTT 241 TCCAGAAATA AAATCTGTTA CTCAAAACGA CTAAACAGGT CGTTACAATA GATACCAATT 301 TACCCATCGT TCGTCCCCGA ACGATCACAA GAAGAAAAAC AAGGGCGAAA AGGAGTACCT 361 GAATCTGTAA ACAGGTATGG GTATCTTTCT CGCATATCAA CTTCCTTCTC CCAAGTGGAT 421 TCTTCAACTG GTCGATTCTT CCATTGAACT TTGATAGATG CAATCTCCCT TGACCTCAAT 481 TTGCGGACTT CTCTATCTAA AATGGCAACA GGCTCCTCCT CATAAGACAA ATTCTCATCA 541 AG Predicted gene structure (within gDNA segment 65368 to 61701): Exon 1 63195 62652 ( 544 n); cDNA 3 542 ( 540 n); score: 0.866 MATCH C08HBa0294K15.1- SGN-E252199- 0.866 544 1.004 C PGS_C08HBa0294K15.1-_SGN-E252199- (63195 62652) Alignment (genomic DNA sequence = upper lines): ACGCAGCCTG TGACGGCCCG TCGTGCCTGC GACGGTCCGT CCTGCTGCTT CCGTCACAAA 63136 || ||||||| || | | || ||| |||||||||| ||||| | | |||||||| | ACCCAGCCTG GGATTAC--G CAGT--CTGT GACGGTCCGT CCTGC-ACGT CCGTCACAGA 57 GTTCAGAGAC TGAATTTCAT TAAAGGGTCT GTGACGGTCC ATCGTGCCCA CGACGGTCCG 63076 |||||||||| | |||| |||||||| ||||||| || ||| ||| ||||||||| GTTCAGAGAC TAGATTTTTA CCAAGGGTCT GTGACGGCCC ATCACGCCTG TGACGGTCCG 117 TCCTGCCATG TCGTCGCGAA GTTCAGATAG TTGTTCTCAG TACCCAAAAT TTTAGAA-TC 63017 ||||||||| |||| |||| ||||||| || | | | |||| ||||| |||| || |||| || TCCTGCCATT CCGTCACGAA GTTCAGAGAG TCGATTTCAG TACCC-AAAT TTCAGAATTC 176 TAAGTGTTTT GGAACGAGAC CCCTTCGACG GTCCGTCGTG GGATCCGTCG ACCCAGACAA 62957 |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| | ||| || TAAGTGTTTT GGAACGAGAC CCCCTCGACG GTCCGTCGTG GGATCCGTCG TCTCAGTCAG 236 CTATTACTAG AATAAACTCT ACTGCTCAAA ACGACT-AAC AGGTCGTTAC AATAGATACC 62898 | || | |||||| ||| | |||||| |||||| ||| |||||||||| |||||||||| TTTTTCCAGA AATAAAATCT GTTACTCAAA ACGACTAAAC AGGTCGTTAC AATAGATACC 296 AATTTACCCA TCGTTTGTCC CCGAACGATC ACAAGAAGAA AAACAAGGGC GAAAAGGAGT 62838 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| AATTTACCCA TCGTTCGTCC CCGAACGATC ACAAGAAGAA AAACAAGGGC GAAAAGGAGT 356 ACCTGAATCT GTAAACAGGT GTGGGTATTT TTCTTGCATA TCAGCCTCCT TCTCCCAAGT 62778 |||||||||| |||||||||| ||||||| | |||| ||||| ||| | |||| |||||||||| ACCTGAATCT GTAAACAGGT ATGGGTATCT TTCTCGCATA TCAACTTCCT TCTCCCAAGT 416 GGACTTTTCA ATTGGTCGAT TCTTCCATTG AACCTTGATG GATGCAATCT CCCTTGACCT 62718 ||| | |||| | |||||||| |||||||||| ||| ||||| |||||||||| |||||||||| GGATTCTTCA ACTGGTCGAT TCTTCCATTG AACTTTGATA GATGCAATCT CCCTTGACCT 476 CAACTTGCGG ACTTCTCTAT CTAAAATAGC AACAGACTCC TCCTCATAAG ATAAATTCTC 62658 ||| |||||| |||||||||| ||||||| || ||||| |||| |||||||||| | |||||||| CAATTTGCGG ACTTCTCTAT CTAAAATGGC AACAGGCTCC TCCTCATAAG ACAAATTCTC 536 ATCAAG 62652 |||||| ATCAAG 542 hqPGS_C08HBa0294K15.1-_SGN-E252199- (63195 62652) ******************************************************************************** EST sequence 30 +strand 515 n (File: SGN-E242359+) 1 CCTAATCTAC TTTGTTAATA ATGATGCCTT GGTATAAAAG AAGGCTTGAT GAACGAAAGT 61 GGTGAGATTA GGGGATCGGG TGCCACGTTC CGGTACCAGG ATAGAATATG GATCGGGTGT 121 CACGTTCCGA CACCAGGATA GAATATGGAT CGGGTGCCAC GTTCCGGTAC CAGGATAGAA 181 TATGGATCGG GTGTCACGTT CCGACACCAG GATAGAATAT GGATCGGGTG TCACGTTCTG 241 ACACCAGGAT AGAATATGGA TCGGGTGCCA CGTTCCGGTG CCAGGATAGT ATATTGAGGA 301 GTGGAGTGTC ACGTAAGGAC ACGAGGGGAA TAAATATGAT GAATCTTGAA ATATGTTAAT 361 ATATGCAATC CAATGAACTA AATTCCCAAA TAAGTATGAT GAGGAGGTGT GAGTCCTCAT 421 TGATGTGCTT GGTGATGCAA CCAAGGGTTA TGGTAATTGC AAATGCTGCA TGCTAAGGAT 481 ATTAGTTAAT TTTATGATAT TGCTTAATAC ATACT Predicted gene structure (within gDNA segment 62895 to 67273): Exon 1 63678 63973 ( 296 n); cDNA 4 291 ( 288 n); score: 0.841 Intron 1 63974 64033 ( 60 n); Pd: 0.000 (s: 0.84), Pa: 0.000 (s: 0.72) Exon 2 64034 64255 ( 222 n); cDNA 292 512 ( 221 n); score: 0.718 MATCH C08HBa0294K15.1+ SGN-E242359+ 0.789 518 1.006 C PGS_C08HBa0294K15.1+_SGN-E242359+ (63678 63973,64034 64255) Alignment (genomic DNA sequence = upper lines): AACCCTCTGT GTTAATGATG ATGCCTTGGT ATAAAAGAAG GCTTGATGAA CTAAAAGAAT 63737 || | || | |||||| ||| |||||||||| |||||||||| |||||||||| | ||| | AATCTACTTT GTTAATAATG ATGCCTTGGT ATAAAAGAAG GCTTGATGAA CGAAAGTGGT 63 GAGGTTAGTG GATCAGGTGT CACGTTCCGA CACCAGGATA GTAGTAGTGA ATCGGGTGTC 63797 ||| |||| | |||| |||| ||||||||| ||||||||| | | || || |||||||||| GAGATTAGGG GATCGGGTGC CACGTTCCGG TACCAGGATA G-AATA-TGG ATCGGGTGTC 121 ACGTTCCGAC ACTAGGATAG TAATAGTGGA TCGGGT--CA CGTTCCGACA CCAGGATAGT 63855 |||||||||| || ||||||| |||| |||| |||||| || ||||||| | ||||||||| ACGTTCCGAC ACCAGGATAG -AATA-TGGA TCGGGTGCCA CGTTCCGGTA CCAGGATAG- 178 AATAGTGGAT CGGGTGTCAC GTTCTGACAC CAAGATACTA GTAATGGATC GGGTGTCACG 63915 |||| ||||| |||||||||| |||| ||||| || |||| | | ||||||| |||||||||| AATA-TGGAT CGGGTGTCAC GTTCCGACAC CAGGATA-GA AT-ATGGATC GGGTGTCACG 235 TTCCGACACC AGGATAGTAG TAATGGATCG GGTATCACGT TCCGACACCA GGATAGTAGT 63975 ||| |||||| ||||||| | | |||||||| ||| ||||| |||| ||| |||||||| TTCTGACACC AGGATAG-AA T-ATGGATCG GGTGCCACGT TCCGGTGCCA GGATAGTA.. 291 AGTGGATCGG GTGTCACGGT AGTAGTGGAT CGGGTGTCAC GTTCTGACAC CAGGATAGTA 64035 || .......... .......... .......... .......... .......... ........TA 293 GTAGAGGATC GGAGTGTCAC GTTCCGACAC CAGGATAGTA AAAAGAATGA ATCTTGAATC 64095 | ||||| |||||||||| || ||||| ||| | || || | |||| |||||||| -TTGAGGAGT GGAGTGTCAC GTAAGGACAC GAGGGGAATA AATATGATGA ATCTTGAAAT 352 ATGTTAATAT ACTCAGGTTT AAAGAAACTA TTTCCCAAAC GAGTATGGTG TGGAGGCGTG 64155 |||||||||| | || | || ||| | |||||||| |||||| || ||||| ||| ATGTTAATAT ATGCA-ATCC AATGAACTAA ATTCCCAAAT AAGTATGATG AGGAGGTGTG 411 AGTACTCATG GATGCGCTTG G-GTTGTGGC CAATGGTTAT GGTACTTGTT GTTGTTGTCT 64214 ||| ||||| |||| ||||| | | || | ||| |||||| |||| ||| || || | AGTCCTCATT GATGTGCTTG GTGATGCAAC CAAGGGTTAT GGTAATTGCA AATGCTGCAT 471 GTTGAGTATT GTAGTTGATT TTATGTTATT ATCTGATATA T 64255 | | || || ||||| ||| ||||| |||| | ||| | | GCTAAGGATA TTAGTTAATT TTATGATATT GCTTAATACA T 512 hqPGS_C08HBa0294K15.1+_SGN-E242359+ (63678 63973,64034 64255) ******************************************************************************** EST sequence 114 -strand 686 n (File: SGN-E241789-) 1 TTGTTAATGA TGATGTCTTG GTATAAAAGA AGGCTTGATG AACTAAAAGA ATGAGGTTAG 61 GGGATCGGGT GTCACGAACC GACACGTAGT ATTAATGGAT CGGGTGTCAC GAACCGACAC 121 ATAGTATTAA TGGATCGGGT GTCACGAATC GGCACGTAGT ATTAGGAGAT CGGGTGTAAC 181 GAACCGACAC GTAGTATTAG GGGATCGGGT GTCACGAACC GACACGTAGC ATTAGGGGAT 241 CGGAGTATCA CGTTCCGACA CCACGATAGT AAAAAGAATG AATCTTGAAT TATGTTAATG 301 TACTCAATTT AATGAACCTG TTTCCCAAAT GAGTATGGTG TGGAGGCTTG AGTCCTCATA 361 GATGTTCTTG GGTTGTGCCC AATGGTTATG GTACTTGTTG TTGTCACCTG TTAAGTGTTA 421 TGGTTGATTT TATTTTATTA TTTGATATAT ATTGTTCTCT ATTCTGAGTT GGCCGATGAT 481 ATCTACTCAG TACTCGTGTT TGTACTGACC CCTACTTTTA TGTTTTCTTT TTGTTAATTG 541 TGGAGTGCAG CAAACGTACC GTCGTCTTCA ACTCAACCGC AACTCTAACC AGTCTTCATC 601 ACGTCAGATT TCAGGGTGAG CTATTGTTCC TAGCTCGGAC TGGATTCTCT CTCATTCATG 661 TCTTGATGTC CTTGAAGATC AGACAT Predicted gene structure (within gDNA segment 62932 to 65570): Exon 1 63687 63809 ( 123 n); cDNA 2 120 ( 119 n); score: 0.886 Intron 1 63810 63850 ( 41 n); Pd: 0.000 (s: 0.78), Pa: 0.000 (s: 0.72) Exon 2 63851 63963 ( 113 n); cDNA 121 225 ( 105 n); score: 0.752 Intron 2 63964 64028 ( 65 n); Pd: 0.000 (s: 0.76), Pa: 0.000 (s: 0.88) Exon 3 64029 64490 ( 462 n); cDNA 226 686 ( 461 n); score: 0.856 MATCH C08HBa0294K15.1+ SGN-E241789- 0.845 698 1.017 C PGS_C08HBa0294K15.1+_SGN-E241789- (63687 63809,63851 63963,64029 64490) Alignment (genomic DNA sequence = upper lines): TGTTAATGAT GATGCCTTGG TATAAAAGAA GGCTTGATGA ACTAAAAGAA TGAGGTTAGT 63746 |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| ||||||||| TGTTAATGAT GATGTCTTGG TATAAAAGAA GGCTTGATGA ACTAAAAGAA TGAGGTTAGG 61 GGATCAGGTG TCACGTTCCG ACACCAGGAT AGTAGTAGTG AATCGGGTGT CACGTTCCGA 63806 ||||| |||| ||||| ||| |||| | | |||| || || ||||||||| |||| |||| GGATCGGGTG TCACGAACCG ACAC---G-T AGTATTAATG GATCGGGTGT CACGAACCGA 117 CACTAGGATA GTAATAGTGG ATCGGGTCAC GTTCCGACAC CAGGATAGTA ATAGTGGATC 63866 ||| |||||| || |||||| CAC....... .......... .......... .......... ....ATAGTA TTAATGGATC 136 GGGTGTCACG TTCTGACACC AAGATACTAG TAATGGATCG GGTGTCACGT TCCGACACCA 63926 |||||||||| | ||| || || ||| | ||||| ||||| ||| |||||| | GGGTGTCACG AATCGGCACG TAG-TATTAG -GA--GATCG GGTGTAACGA ACCGACA-C- 190 GGATAGTAGT AATGGATCGG GTATCACGTT CCGACACCAG GATAGTAGTA GTGGATCGGG 63986 | ||||| | | ||||||| || ||||| ||||||| -G-TAGTATT AGGGGATCGG GTGTCACGAA CCGACAC... .......... .......... 225 TGTCACGGTA GTAGTGGATC GGGTGTCACG TTCTGACACC AGGATAGTAG TAGAGGATCG 64046 | ||| | ||| |||||| .......... .......... .......... .......... ..G-TAGCAT TAGGGGATCG 242 GAGTGTCACG TTCCGACACC AGGATAGTAA AAAGAATGAA TCTTGAATCA TGTTAATATA 64106 |||| ||||| |||||||||| | |||||||| |||||||||| |||||||| | ||||||| || GAGTATCACG TTCCGACACC ACGATAGTAA AAAGAATGAA TCTTGAATTA TGTTAATGTA 302 CTCAGGTTTA AAGAAACTAT TTCCCAAACG AGTATGGTGT GGAGGCGTGA GTACTCATGG 64166 |||| |||| | ||| || | |||||||| | |||||||||| |||||| ||| || ||||| | CTCA-ATTTA ATGAACCTGT TTCCCAAATG AGTATGGTGT GGAGGCTTGA GTCCTCATAG 361 ATGCGCTTGG GTTGTGGCCA ATGGTTATGG TACTTGTTGT TGTTGTCTGT TGAGTATTGT 64226 ||| ||||| |||||| ||| |||||||||| |||||||||| ||| |||| | ||| || | ATGTTCTTGG GTTGTGCCCA ATGGTTATGG TACTTGTTGT TGTCACCTGT TAAGTGTTAT 421 AGTTGATTTT ATGTTATTAT CTGATATATG TTATTTTCTA TTTTGAGTTG GCCGATGATA 64286 ||||||||| || ||||||| |||||||| || || |||| || ||||||| |||||||||| GGTTGATTTT ATTTTATTAT TTGATATATA TTGTTCTCTA TTCTGAGTTG GCCGATGATA 481 CCTACTCAGT ACTTGTGCCT TGTACTGACC CCTACTTGTA TGTTTCTTTC TTGTTATTTT 64346 ||||||||| ||| ||| | |||||||||| ||||||| || ||||| || |||||| || TCTACTCAGT ACTCGTG-TT TGTACTGACC CCTACTTTTA TGTTTTCTTT TTGTTAATTG 540 TGGAGTGCAG CAAACGTGCC ATCGACTTCG ACTCAACCGC AACTCTAGCC AGACTTCAGC 64406 |||||||||| ||||||| || ||| |||| |||||||||| ||||||| || || ||||| | TGGAGTGCAG CAAACGTACC GTCGTCTTCA ACTCAACCGC AACTCTAACC AGTCTTCATC 600 ATAATCAGAT TTCAGGGTGA GCTATTGTTC CTAGTTCGGA CTGGATTCT- T-TCCTTCGC 64464 | |||||| |||||||||| |||||||||| |||| ||||| ||||||||| | || ||| A-CGTCAGAT TTCAGGGTGA GCTATTGTTC CTAGCTCGGA CTGGATTCTC TCTCATTCAT 659 GTCTTGATGT -CTTGAAGTT CGGACAT 64490 |||||||||| ||||||| | | ||||| GTCTTGATGT CCTTGAAGAT CAGACAT 686 hqPGS_C08HBa0294K15.1+_SGN-E241789- (63687 63809,63851 63963,64029 64490) ******************************************************************************** EST sequence 160 -strand 730 n (File: SGN-E546506-) 1 GTTCCGGTAC CAGGATAGAA TATGAGGATC GGAGTGTCAC GTTCCGACAC CAGGATAGAA 61 AATGGATCGG GTGCCACGTT CCGGTACCAG GATAGAATGA GGATCGGAGT GCCACGTTCC 121 GGCACCAGGA TAGAAATAGA GGATCGGAGT GTCACGTACC GACACAAGAG GAAGAAAGAT 181 AATGAATCTT GAAAGATAAT GAATATACTC AATCTAATGA ACTTAATTCC CAAATGAGTA 241 TGGTATTGAG GCTTGAGTCC TCATGTGTGA ACTCGGTTGT AGTTATTGAT GAATTCATGG 301 TGTTATTGCT ACATGTTGAG TATTGTAGTT GATTTACATT ATTATTGATA TATACTGTTC 361 CCTATTTTGA GTTGGCCGAT GATATCTACT CAGTACGTGT GGTTGTACTG ACCCCTACTT 421 TCATGTTTTC CTCTTTGTTA TTTGTGTAAT GCAGCAAACG TTCCGTCAAC TTCAACTCAA 481 CAGTAGATCT AGCCAGTCTT CACTTCATCG GAAAATTCAG GGTGAGCTAA TGCGTCTAGC 541 TTGGACTGGG TCTTCTTCTT CAAGTCTTGA TGCCTTGAAT TTCCGGCATG GACTAGCTTT 601 TTAGTTATTT TGTTCTTAGA CATTCCTAGT TAAGTAATTT GAGATAGATG TTCTTGTGAT 661 GATGACTTCC AGATTTTGGG GATAATAATA ATAGTATTGA ATTGTTTTTA TTAAAAAAAA 721 AAAAAAAAAA Predicted gene structure (within gDNA segment 63163 to 65632): Exon 1 63837 63934 ( 98 n); cDNA 1 97 ( 97 n); score: 0.801 Intron 1 63935 63997 ( 63 n); Pd: 0.000 (s: 0.82), Pa: 0.000 (s: 0.81) Exon 2 63998 64597 ( 600 n); cDNA 98 691 ( 594 n); score: 0.775 PPA cDNA 713 730 MATCH C08HBa0294K15.1+ SGN-E546506- 0.779 698 0.956 C PGS_C08HBa0294K15.1+_SGN-E546506- (63837 63934,63998 64597) Alignment (genomic DNA sequence = upper lines): GTTCCGACAC CAGGATAGTA ATAGTGGATC GG-GTGTCAC GTTCTGACAC CAAGATACTA 63895 |||||| || |||||||| | | ||||| || ||||||| |||| ||||| || |||| | GTTCCGGTAC CAGGATAGAA TATGAGGATC GGAGTGTCAC GTTCCGACAC CAGGATA-GA 59 GTAATGGATC GGGTGTCACG TTCCGACACC AGGATAGTAG TAATGGATCG GGTATCACGT 63955 |||||||| ||||| |||| ||||| ||| ||||||| | -AAATGGATC GGGTGCCACG TTCCGGTACC AGGATAGAA. .......... .......... 97 TCCGACACCA GGATAGTAGT AGTGGATCGG GTGTCACGGT AGTAGTGGAT CGG-GTGTCA 64014 | | |||| ||| ||| || .......... .......... .......... .......... ..T-GAGGAT CGGAGTGCCA 114 CGTTCTGACA CCAGGATAGT AGTAGAGGAT CGGAGTGTCA CGTTCCGACA CCAGGATAGT 64074 ||||| | || ||||||||| | |||||||| |||||||||| ||| |||||| | || | CGTTCCGGCA CCAGGATAGA AATAGAGGAT CGGAGTGTCA CGTACCGACA CAAGAGGAAG 174 AAAAAGAATG AATCTTGAAT CATG-TTAAT ATACTCAGGT TTAAAGAAAC TATTTCCCAA 64133 ||| | |||| ||||||||| || | ||| ||||||| | ||| ||| || ||||||| AAAGATAATG AATCTTGAAA GATAATGAAT ATACTCA-AT CTAATGAACT TAATTCCCAA 233 ACGAGTATGG TGTGGAGGCG TGAGTACTCA TGGATGCGCT TGGGTTGTGG CCAATGGT-T 64192 | |||||||| | | ||||| ||||| |||| || || | | |||||| | | || | ATGAGTATGG TATTGAGGCT TGAGTCCTCA TGTGTGAAC- TCGGTTGTAG TTATTGATGA 292 ATGGTACTTG TTGTTGTTGT CTGTTGAGTA TTGTAGTTGA TTTTATGTTA TTATCTGATA 64252 || || || ||| | ||||||||| |||||||||| |||| ||| |||| ||||| ATTCATGGTG TTATTGCTAC ATGTTGAGTA TTGTAGTTGA -TTTACATTA TTAT-TGATA 350 TATGTTATTT TCTATTTTGA GTTGGCCGAT GATACCTACT CAGTACTTGT GCCTTGTACT 64312 ||| | || ||||||||| |||||||||| |||| ||||| |||||| ||| | ||||||| TATACTGTTC CCTATTTTGA GTTGGCCGAT GATATCTACT CAGTACGTGT G-GTTGTACT 409 GACCCCTACT TGTATG-TTT CTTTCTTGTT ATTTTTGGAG TGCAGCAAAC GTGCCATCGA 64371 |||||||||| | ||| ||| | | ||||| |||| || | |||||||||| || || || | GACCCCTACT TTCATGTTTT CCTCTTTGTT ATTTGTGTAA TGCAGCAAAC GTTCCGTCAA 469 CTTCGACTCA ACCGCAACTC TAGCCAGACT TCAGCATAAT C--AGATTTC AGGGTGAGCT 64429 |||| ||||| || | | || ||||||| || ||| | | || | | | ||| |||||||||| CTTCAACTCA ACAGTAGATC TAGCCAGTCT TCA-CTTCAT CGGAAAATTC AGGGTGAGCT 528 ATTGTTCCTA GTTCGGACTG GATTCTTTCC TTCGCGTCTT GATGTCTTGA AGTTCGGACA 64489 | || ||| | | |||||| | | | | | ||| ||||| |||| ||||| | ||| | || AATGCGTCTA GCTTGGACTG GGTCTTCTTC TTCAAGTCTT GATGCCTTGA ATTTCCGGCA 588 TGGACCATCT CTTTTACTTA TTTTAGCTTC TTAGATACTC TTAGATTTAG TAATTTGAGG 64549 ||||| | || ||||| ||| |||| | ||| ||||| | || ||| || || |||||||| | TGGACTAGCT -TTTTAGTTA TTTT-G-TTC TTAGACATTC CTAG-TTAAG TAATTTGA-G 643 ATAGATGTTC TTGTGATGAT GACTTCCAGA TTTTGGGGAT AATGATAA 64597 |||||||||| |||||||||| |||||||||| |||||||||| ||| |||| ATAGATGTTC TTGTGATGAT GACTTCCAGA TTTTGGGGAT AATAATAA 691 hqPGS_C08HBa0294K15.1+_SGN-E546506- (63837 63934,63998 64597) ******************************************************************************** EST sequence 69 +strand 660 n (File: SGN-E349296+) 1 GAAAAACTGG CAGAAATGAC GGACCCCACG ACGGACCATC ATGGGCACGA CGGACCGTCG 61 CAGGGTCTCA TTTCAAAACA CTTAGGAAAT CTGAAATTGG GTACTGAAAA TCGACTCTCT 121 GAACTTCGTA ACGGAATGGC AAGACGGACC GTCACAGGCG TGATGGACCA TCACAGAGTC 181 TTCAGTGAAA ATCCAGTCTC TGAACCTTGC GACGACCTGC AGGACGGACC GTCGCAGGCA 241 CAACGGGCTG TCACAGGCTG CGTAAATCCC AGTCTGAGTC GGAATTCCTC AATTGTTTTA 301 AGGGACGTTT TTGACTATTC CTGCTTTAAT TATAAAGTTA GTGGGTTAAT GTTAATAAGT 361 CTAATTACTT GGGGGTTAAA AGAGGTAACC TTAAGTTAAT TAGTGGGTTA TTATTGCCAT 421 ATTTTATTCT TAATTATATA CTAATTAGGG TAAAAGAAAG AGGGTTTGAA TAAAGAAAAT 481 AGAAAGAACA AGAGAAAGAG AGAGAAAGTC GAACGAGAAA GAGGATCGAA CGAGAGGAAA 541 AAACACAAAG CTTGGGAAAT CACTTGCTTG ATCACGAATC TTCGGTGGAG GTAGGTTATG 601 GTTTCTCTTA CGATATTCGT AGTAAGCTCT TAATAGCGAA TAATATGTAT TGATAATATT Predicted gene structure (within gDNA segment 60371 to 66721): Exon 1 62980 63583 ( 604 n); cDNA 49 660 ( 612 n); score: 0.765 MATCH C08HBa0294K15.1+ SGN-E349296+ 0.765 604 0.915 C PGS_C08HBa0294K15.1+_SGN-E349296+ (62980 63583) Alignment (genomic DNA sequence = upper lines): GACGGACCGT CGAAGGGGTC TCGTTCCAAA ACACTTAGAT TCTAAAATTT TGGGTACTGA 63039 |||||||||| || | ||||| || || |||| |||||||| | | | |||||||||| GACGGACCGT CGCA-GGGTC TCATTTCAAA ACACTTAGGA AATCTGAAAT TGGGTACTGA 107 GAA-CAACTA TCTGAACTTC GCGACGACAT GGCAGGACGG ACCGTCGTGG GCACGATGGA 63098 || | ||| |||||||||| | ||| || |||| ||||| |||||| | || |||||| AAATCGACTC TCTGAACTTC GTAACGGAAT GGCAAGACGG ACCGTCACAG GCGTGATGGA 167 CCGTCACAGA CCCTTTAATG -AAATTCAGT CTCTGAACTT TGTGACGGAA GCAGCAGGAC 63157 || ||||||| ||| | || |||| |||| |||||||| | || ||| | | | ||||||| CCATCACAGA GTCTTCAGTG AAAATCCAGT CTCTGAACCT TGCGAC-G-A CCTGCAGGAC 225 GGACCGTCGC AGGCACGACG GGCCGTCACA GGCTGCGT-A A-CCCTGACT GAGTCGGATT 63215 |||||||||| |||||| ||| ||| |||||| |||||||| | | ||| | || |||||||| | GGACCGTCGC AGGCACAACG GGCTGTCACA GGCTGCGTAA ATCCCAGTCT GAGTCGGAAT 285 TCTGTTAAAT GTTTTAAGGG GCGTTTTGGA CTATTCCTGC TTATAATTGT AAAGTTAGTG 63275 || | || | |||||||||| |||||| || |||||||||| || ||||| | |||||||||| TC-CTCAATT GTTTTAAGGG ACGTTTTTGA CTATTCCTGC TT-TAATTAT AAAGTTAGTG 343 GGTTAATGTT AATAATTC-A ATTACTTGGG GGTTAAAGGT GATAACCTTG AAATAAATAG 63334 |||||||||| ||||| || | |||||||||| ||||||| | | ||||||| | ||| ||| GGTTAATGTT AATAAGTCTA ATTACTTGGG GGTTAAAAGA GGTAACCTTA AGTTAATTAG 403 TGGGTTACTT TTACCATCTT TTATACTTAA TTATATGGTA ATTAGGGTAA AAGAAAAAGA 63394 ||||||| | || |||| || |||| ||||| |||||| || |||||||||| |||||| || TGGGTTATTA TTGCCATATT TTATTCTTAA TTATATACTA ATTAGGGTAA AAGAAAGAGG 463 GTTTGAATAA GGAAAAATAG AAAGAAC-AG A-AGAGAGGG ACGAA--CGA GCGAG--AGA 63448 |||||||||| | ||||||| ||||||| || | | |||| | | || ||| |||| ||| GTTTGAATAA AG-AAAATAG AAAGAACAAG AGAAAGAGAG AGAAAGTCGA ACGAGAAAGA 522 AGATAGAACG A-AGAGGAAA GCAAAGACCT TGAAGAGTAG CTTGCGTGAT CACGAATTCT 63507 ||| ||||| | || ||| || | | || || | | ||||| |||| |||||| ||| GGATCGAACG AGAGGAAAAA ACACAAAGCT TGGGAAATCA CTTGCTTGAT CACGAA-TCT 581 TCGATGGAAG TAGGTTATGG TTTATGTT-- -AT-TTCATA GTAAACTCTT AATAGCGAAT 63563 ||| |||| | |||||||||| ||| | || || ||| || |||| ||||| |||||||||| TCGGTGGAGG TAGGTTATGG TTTCTCTTAC GATATTCGTA GTAAGCTCTT AATAGCGAAT 641 GATATGTATT GGGTAGTATT 63583 ||||||||| | || |||| AATATGTATT -GATAATATT 660 hqPGS_C08HBa0294K15.1+_SGN-E349296+ (62980 63583) ******************************************************************************** EST sequence 26 -strand 390 n (File: SGN-E242274-) 1 AATTAATTCA AGGTTATCTC CTTCAACCCC CCAAGTAATT GAATTATTAA CATTAAACCA 61 CTAATTTCAT AATTATAAGC AGGAATAGTC CAAAACGCCC CTTAAAACAT TTAACAAAAA 121 TCCGACCCAG TCAGGGTTAC GCAGTCTGTG ACGACCAGTC GTGCCTGCGA CGGTCCGTCC 181 TGCTGCTTCC GTCACAAAGT TCAGAGATTA AATTTCACTA AGGGTTTGTG ACAGCCCGTC 241 ATGCCTGTGA CGGTCCGTCG TGCCATTTCG TCGCGAAGTT CAGAGAGTCG ATCTCAGTAC 301 CCAAATTTCA GAATTCTAAG TGTTTTGGAA CGAGACACCC TCCACGGTCC GTCGTGCTCA 361 TGACGGTCCG TCGTGGGATC CGTCGACTCA Predicted gene structure (within gDNA segment 64186 to 60697): Exon 1 63330 62980 ( 351 n); cDNA 3 353 ( 351 n); score: 0.889 MATCH C08HBa0294K15.1- SGN-E242274- 0.889 351 0.900 C PGS_C08HBa0294K15.1-_SGN-E242274- (63330 62980) Alignment (genomic DNA sequence = upper lines): TTATTTCAAG GTTATCACCT TTAACCC-CC AAGTAATTGA ATTATTAACA TTAACCCACT 63272 ||| |||||| |||||| ||| | ||||| || |||||||||| |||||||||| |||| ||||| TTAATTCAAG GTTATCTCCT TCAACCCCCC AAGTAATTGA ATTATTAACA TTAAACCACT 62 AACTTTACAA TTATAAGCAG GAATAGTCCA AAACGCCCCT TAAAACATTT AACAGAAATC 63212 || || | || |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| AATTTCATAA TTATAAGCAG GAATAGTCCA AAACGCCCCT TAAAACATTT AACAAAAATC 122 CGACTCAGTC AGGGTTACGC AGCCTGTGAC GGCCCGTCGT GCCTGCGACG GTCCGTCCTG 63152 |||| ||||| |||||||||| || ||||||| | || ||||| |||||||||| |||||||||| CGACCCAGTC AGGGTTACGC AGTCTGTGAC GACCAGTCGT GCCTGCGACG GTCCGTCCTG 182 CTGCTTCCGT CACAAAGTTC AGAGACTGAA TTTCATTAAA GGGTCTGTGA CGGTCCATCG 63092 |||||||||| |||||||||| ||||| | || ||||| | || |||| ||||| | | || || CTGCTTCCGT CACAAAGTTC AGAGATTAAA TTTCACT-AA GGGTTTGTGA CAGCCCGTCA 241 TGCCCACGAC GGTCCGTCCT GCCATGTCGT CGCGAAGTTC AGATAGTTGT TCTCAGTACC 63032 |||| ||| |||||||| | ||||| |||| |||||||||| ||| ||| | |||||||||| TGCCTGTGAC GGTCCGTCGT GCCATTTCGT CGCGAAGTTC AGAGAGTCGA TCTCAGTACC 301 CAAAATTTTA GAA-TCTAAG TGTTTTGGAA CGAGACCCCT TCGACGGTCC GTC 62980 | |||||| | ||| |||||| |||||||||| |||||| || || ||||||| ||| C-AAATTTCA GAATTCTAAG TGTTTTGGAA CGAGACACCC TCCACGGTCC GTC 353 hqPGS_C08HBa0294K15.1-_SGN-E242274- (63330 62980) ******************************************************************************** EST sequence 1 +strand 605 n (File: SGN-E347579+) 1 AATAAAGAAA ATAGAAAGAA CAAGAGAGAG AGGAAGAATC GAACGAGAAG GGAGAAACAA 61 AGCTTGGAGA AAAATTTGCT TGCTTGATCA CTAATCTTCG GTGGAGGTAG GTTATGGTTT 121 TCATGCTTTC ATAGTAAACT CTTAATAGAG AATGATATGT ATTGGTAGTA TTGTAAACCC 181 TGCTATATGC TTAATTGTAT GCATGCATGA ACGTGATTAT ATAATTGTGA TTATATTAAG 241 CATGATGAAG TTATTGAATC CCAAATCTTG ATAAAAATCT AATCTCTTAT TAATGATGAT 301 GCCTTGGTAT AGAAGAAGGC TTGATGAATA AAAGTAATGG GATTGATGAT GCCTTGGTAT 361 AGAGAAGGCC TGATGATTTA CAGAATGATA TTAGTGGATC GGAGTGTCAC GTACCGACAC 421 ATGCAGGGGA TCGGGTGTCA CGAACCGACA CGTAGAATTA GGGGATCGGG TGTCACGAAC 481 TGGCACGTAG AATTAGGGGA TCGGGTGTCA CGAACCGGCA CGTAGATTAG GGGATCAGGT 541 GTCACGAACC GACACGTAGA ATTAGGGGAT CGGGTGTCAC GAACCGACAC GTAGAATTAG 601 GGGAT Predicted gene structure (within gDNA segment 61677 to 67107): Exon 1 63488 63780 ( 293 n); cDNA 79 380 ( 302 n); score: 0.677 Intron 1 63781 63846 ( 66 n); Pd: 0.000 (s: 0.44), Pa: 0.000 (s: 0.70) Exon 2 63847 63993 ( 147 n); cDNA 381 512 ( 132 n); score: 0.724 MATCH C08HBa0294K15.1+ SGN-E347579+ 0.693 440 0.727 C PGS_C08HBa0294K15.1+_SGN-E347579+ (63488 63780,63847 63993) Alignment (genomic DNA sequence = upper lines): CTTGCGTGAT CACGAATTCT TCGATGGAAG TAGGTTATGG TTTATGTTAT TTCATAGTAA 63547 ||||| |||| ||| || ||| ||| |||| | |||||||||| ||| | | |||||||||| CTTGCTTGAT CACTAA-TCT TCGGTGGAGG TAGGTTATGG TTTTCATGCT TTCATAGTAA 137 ACTCTTAATA GCGAATGATA TGTATTGGGT AGTATTGTAA AGTCTTCTAT ATGCTTAATT 63607 |||||||||| | |||||||| |||||| ||| |||||||||| | || |||| |||||||||| ACTCTTAATA GAGAATGATA TGTATT-GGT AGTATTGTAA ACCCTGCTAT ATGCTTAATT 196 GTATGCTTGC ATG-ATGTGA TTATGTAAGT GTAATGA-GT T-GGAAAGAT GAGGTT-GTG 63663 |||||| ||| ||| | |||| |||| ||| | || || | | | | | ||| || ||| || GTATGCATGC ATGAACGTGA TTATATAATT GTGATTATAT TAAGCATGAT GAAGTTATTG 256 AAGCTTAAA- C---CT-AAA A-C-CCTCTG TG-TTAATGA TGATGCCTTG GTATAAAAGA 63715 || | ||| | | ||| | | ||| | ||||||| |||||||||| ||||| |||| AATCCCAAAT CTTGATAAAA ATCTAATCTC TTATTAATGA TGATGCCTTG GTATAGAAGA 316 AGGCTTGATG AACTAAAAG- AATGAGGTTA GTGGATCAGG TGTCACGTTC CGACACCAGG 63774 |||||||||| || |||||| |||| | || || | || | | | | | AGGCTTGATG AA-TAAAAGT AATGGGATTG ATGATGCCTT GGTATAGAGA AGGCCTGATG 375 ATAGTAGTAG TGAATCGGGT GTCACGTTCC GACACTAGGA TAGTAATAGT GGATCGGGTC 63834 || || AT-TTA.... .......... .......... .......... .......... .......... 380 ACGTTCCGAC ACCAGGATAG TAATAGTGGA TCGG-GTGTC ACGTTCTGAC ACCAAGATAC 63893 ||| || || ||||||| |||| ||||| |||| | ||| | | || | .......... ..CAGAATGA TATTAGTGGA TCGGAGTGTC ACGTACCGAC A-C---ATGC 424 TAGTAATGGA TCGGGTGTCA CGTTCCGACA CCAGGATAGT AGTAATGGAT CGGGTATCAC 63953 || ||| |||||||||| || |||||| | | ||| | || |||| ||||| |||| -AG---GGGA TCGGGTGTCA CGAACCGACA -C--G-TAGA ATTAGGGGAT CGGGTGTCAC 476 GTTCCGACAC CAGGATAGTA GTAGTGGATC GGGTGTCACG 63993 | | | || | | ||| | ||| ||||| |||||||||| GAACTGGCA- C--G-TAGAA TTAGGGGATC GGGTGTCACG 512 hqPGS_C08HBa0294K15.1+_SGN-E347579+ (63847 63993) ******************************************************************************** EST sequence 81 -strand 679 n (File: SGN-E370357-) 1 TTGGAGGTGG TGTTGCCATG GTGGATTGGG GGAAAAATGG AATTGGACTT TGTAGGAGGA 61 GAAATGGGCA TTTACTTACA CAAATGGCCA CTATTTACAA GAAAACACAT CAGAAATTCG 121 AGGAAAATTC TGCATCCGTA GGCAAATTTG AAAAATTTTA CAAATGGCAG AGGTGTAATC 181 AATCAATAAT ATTTGGGTGA CAGCCGAATG ATTAATTGAC ACTCGAATAA AGCAAACGTA 241 CCGTCGTCTT CAACTCAACC GCAACTCTAG CCAGTCTTCA TTATACCGGA TTTCAGTGTG 301 AGCTAACGCT TCTAGCTTGG ACTGGATCTT CTTCTTCATG TCTTGATGCC TTGAAGTTCC 361 GGCATGGACT AGCTTTTTAG TTATTCTAGC TTTCTAGATA CTCTTAGAAT TAGTAATTTG 421 AGGATAGATG TTCTTGTGAT GATGACTTCC AGATTTTGGG GATAATAATA GTTGTTGAGT 481 TTTTAGAAGT TATTTAATTG ATTTTCATTA ATGAGTTTAA GTCTTCCGCA TTATATTCCG 541 TCATTATATT GAAATGTTGG ATTTTGTATT GGTTGGTTCG CTCACATAGG AGGGTAAGTG 601 TGGGTGCCAC TTGCGGCTCG ATTTGGGTCG TGACATTAAA GATTATCGAA TTCATAATAT 661 AATTGTAAGA AAAAAAAAA Predicted gene structure (within gDNA segment 59836 to 67322): Exon 1 64355 64761 ( 407 n); cDNA 231 635 ( 405 n); score: 0.834 PPA cDNA 667 679 MATCH C08HBa0294K15.1+ SGN-E370357- 0.834 407 0.599 C PGS_C08HBa0294K15.1+_SGN-E370357- (64355 64761) Alignment (genomic DNA sequence = upper lines): AGCAAACGTG CCATCGACTT CGACTCAACC GCAACTCTAG CCAGACTTCA GCATAATCAG 64414 ||||||||| || ||| ||| | |||||||| |||||||||| |||| ||||| || | | | AGCAAACGTA CCGTCGTCTT CAACTCAACC GCAACTCTAG CCAGTCTTCA TTAT-ACCGG 289 ATTTCAGGGT GAGCTATTGT TCCTAGTTCG GACTGGATTC TTTCCTTCGC GTCTTGATGT 64474 ||||||| || |||||| | | |||| | | |||||||| | | |||| ||||||||| ATTTCAGTGT GAGCTAACGC TTCTAGCTTG GACTGGATCT TCTTCTTCAT GTCTTGATGC 349 CTTGAAGTTC GGACATGGAC CATCTCTTTT ACTTATTTTA GCTTCTTAGA TACTCTTAGA 64534 |||||||||| | ||||||| | || |||| | ||||| || |||| |||| |||||||||| CTTGAAGTTC CGGCATGGAC TAGCT-TTTT AGTTATTCTA GCTTTCTAGA TACTCTTAGA 408 TTTAGTAATT TGAGGATAGA TGTTCTTGTG ATGATGACTT CCAGATTTTG GGGATAATGA 64594 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | ATTAGTAATT TGAGGATAGA TGTTCTTGTG ATGATGACTT CCAGATTTTG GGGATAATAA 468 TAAGTTTTGA G-TTTTAGAA GTTAATT-GT TGA-TTTCGT TAATGAGTTT TAAGTCTTCC 64651 || | |||| | |||||||| |||| || | ||| |||| | ||||||| || |||||||||| TAGTTGTTGA GTTTTTAGAA GTTATTTAAT TGATTTTCAT TAATGAG-TT TAAGTCTTCC 527 GCATTATATT CTATTTATTA TCGTTGAATT GTTTGGGTTT AGATTGGTTT GTTCGCTCAC 64711 |||||||||| | | |||| | ||||| | ||| | ||| ||||||| |||||||||| GCATTATATT C-CGTCATTA T-ATTGAAAT GTTGGATTTT GTATTGGTTG GTTCGCTCAC 585 ATAGGAGGGT AAGTATGGGT GCCACTCGCG GCCTGTTTTG GGTCGTGACA 64761 |||||||||| |||| ||||| |||||| ||| || | |||| |||||||||| ATAGGAGGGT AAGTGTGGGT GCCACTTGCG GCTCGATTTG GGTCGTGACA 635 hqPGS_C08HBa0294K15.1+_SGN-E370357- (64355 64761) ******************************************************************************** EST sequence 11 +strand 299 n (File: SGN-E373117+) 1 TCTTCTAGCT TGTCCAAATA CTGTCGTAAT TTTGGCAAAC GTACCGTCGT CTTCAACTCA 61 ACCGCAACTC TAGCCAGTCT TCATTACATC GGATTTCAGG GTGAGCTAAC GCTTCTAGCT 121 TGGACTGGAT CTTCTTCTTC ATGTCTTGAT GCCTTGAAGT TCCGGCATGG ACTAGCTGTT 181 TATGTATTTT AGCTTCTTAG ATACTCTTAG ATTTAGTAAT TTGAAGTAGA TGTTCTTGTG 241 ATGATGACTT CCAGATTTTG GGGATAATAA TAGTTGTTGA GTTTTTAGAA AAAAAAAAA Predicted gene structure (within gDNA segment 63227 to 65512): Exon 1 64357 64618 ( 262 n); cDNA 36 295 ( 260 n); score: 0.838 MATCH C08HBa0294K15.1+ SGN-E373117+ 0.838 262 0.876 C PGS_C08HBa0294K15.1+_SGN-E373117+ (64357 64618) Alignment (genomic DNA sequence = upper lines): CAAACGTGCC ATCGACTTCG ACTCAACCGC AACTCTAGCC AGACTTCAGC ATAATCAGAT 64416 ||||||| || ||| |||| |||||||||| |||||||||| || ||||| | ||| ||| CAAACGTACC GTCGTCTTCA ACTCAACCGC AACTCTAGCC AGTCTTCATT A-CATCGGAT 94 TTCAGGGTGA GCTATTGTTC CTAGTTCGGA CTGGATTCTT TCCTTCGCGT CTTGATGTCT 64476 |||||||||| |||| | | |||| | ||| |||||| | | |||| || ||||||| || TTCAGGGTGA GCTAACGCTT CTAGCTTGGA CTGGATCTTC TTCTTCATGT CTTGATGCCT 154 TGAAGTTCGG ACATGGACCA TCTCTTTTAC TTATTTTAGC TTCTTAGATA CTCTTAGATT 64536 |||||||| | ||||||| | || |||| ||||||||| |||||||||| |||||||||| TGAAGTTCCG GCATGGACTA GCT-GTTTAT GTATTTTAGC TTCTTAGATA CTCTTAGATT 213 TAGTAATTTG AGGATAGATG TTCTTGTGAT GATGACTTCC AGATTTTGGG GATAATGATA 64596 |||||||||| | | |||||| |||||||||| |||||||||| |||||||||| |||||| ||| TAGTAATTTG AAG-TAGATG TTCTTGTGAT GATGACTTCC AGATTTTGGG GATAATAATA 272 AGTTTTGAG- TTTTAGAAGT TAA 64618 | ||||| |||||||| || GTTGTTGAGT TTTTAGAAAA AAA 295 hqPGS_C08HBa0294K15.1+_SGN-E373117+ (64357 64618) ******************************************************************************** EST sequence 100 -strand 299 n (File: SGN-E373116-) 1 CTCTTCTAGC TTGTCCAAAT ACTGTCGTAA TTTTGGCAAA CGTACCGTCG TCTTCAACTC 61 AACCGCAACT CTAGCCAGTC TTCATTACAT CGGATTTCAG GGTGAGCTAA CGCTTCTAGC 121 TTGGACTGGA TCTTCTTCTT CATGTCTTGA TGCCTTGAAG TTCCGGCATG GACTAGCTGT 181 TTATGTATTT TAGCTTCTTA GATACTCTTA GATTTAGTAA TTTGAAGTAG ATGTTCTTGT 241 GATGATGACT TCCAGATTTT GGGGATAATA ATAGTTGTTG AGTTTTTAGA AAAAAAAAA Predicted gene structure (within gDNA segment 63207 to 65492): Exon 1 64357 64618 ( 262 n); cDNA 37 296 ( 260 n); score: 0.838 MATCH C08HBa0294K15.1+ SGN-E373116- 0.838 262 0.876 C PGS_C08HBa0294K15.1+_SGN-E373116- (64357 64618) Alignment (genomic DNA sequence = upper lines): CAAACGTGCC ATCGACTTCG ACTCAACCGC AACTCTAGCC AGACTTCAGC ATAATCAGAT 64416 ||||||| || ||| |||| |||||||||| |||||||||| || ||||| | ||| ||| CAAACGTACC GTCGTCTTCA ACTCAACCGC AACTCTAGCC AGTCTTCATT A-CATCGGAT 95 TTCAGGGTGA GCTATTGTTC CTAGTTCGGA CTGGATTCTT TCCTTCGCGT CTTGATGTCT 64476 |||||||||| |||| | | |||| | ||| |||||| | | |||| || ||||||| || TTCAGGGTGA GCTAACGCTT CTAGCTTGGA CTGGATCTTC TTCTTCATGT CTTGATGCCT 155 TGAAGTTCGG ACATGGACCA TCTCTTTTAC TTATTTTAGC TTCTTAGATA CTCTTAGATT 64536 |||||||| | ||||||| | || |||| ||||||||| |||||||||| |||||||||| TGAAGTTCCG GCATGGACTA GCT-GTTTAT GTATTTTAGC TTCTTAGATA CTCTTAGATT 214 TAGTAATTTG AGGATAGATG TTCTTGTGAT GATGACTTCC AGATTTTGGG GATAATGATA 64596 |||||||||| | | |||||| |||||||||| |||||||||| |||||||||| |||||| ||| TAGTAATTTG AAG-TAGATG TTCTTGTGAT GATGACTTCC AGATTTTGGG GATAATAATA 273 AGTTTTGAG- TTTTAGAAGT TAA 64618 | ||||| |||||||| || GTTGTTGAGT TTTTAGAAAA AAA 296 hqPGS_C08HBa0294K15.1+_SGN-E373116- (64357 64618) ******************************************************************************** EST sequence 37 +strand 219 n (File: SGN-E298638+) 1 TCATTACATC GGATTTCAGG GTGAGCTAAC GCTTCTAGCT TGGACTGGAT CTTCTTCTTC 61 ATGTCTTGAT GCCTTGAAGT TCCGGCATGG ACTAGCTGTT TATGTATTTT AGCTTCTTAG 121 ATACTCTTAG ATTTAGTAAT TTGAAGTACA TGTTCTTGTG ATGATGACTG CCAGATTTTG 181 GGGATAATAA TAGTTGTTGA GTTTTTAGAA AAAAAAAAA Predicted gene structure (within gDNA segment 62868 to 65512): Exon 1 64402 64618 ( 217 n); cDNA 1 215 ( 215 n); score: 0.818 MATCH C08HBa0294K15.1+ SGN-E298638+ 0.818 217 0.991 C PGS_C08HBa0294K15.1+_SGN-E298638+ (64402 64618) Alignment (genomic DNA sequence = upper lines): TCAGCATAAT CAGATTTCAG GGTGAGCTAT TGTTCCTAGT TCGGACTGGA TTCTTTCCTT 64461 ||| | || | |||||||| ||||||||| | | |||| | |||||||| | | | ||| TCATTA-CAT CGGATTTCAG GGTGAGCTAA CGCTTCTAGC TTGGACTGGA TCTTCTTCTT 59 CGCGTCTTGA TGTCTTGAAG TTCGGACATG GACCATCTCT TTTACTTATT TTAGCTTCTT 64521 | ||||||| || ||||||| ||| | |||| ||| | || |||| |||| |||||||||| CATGTCTTGA TGCCTTGAAG TTCCGGCATG GACTAGCT-G TTTATGTATT TTAGCTTCTT 118 AGATACTCTT AGATTTAGTA ATTTGAGGAT AGATGTTCTT GTGATGATGA CTTCCAGATT 64581 |||||||||| |||||||||| |||||| | | | |||||||| |||||||||| || ||||||| AGATACTCTT AGATTTAGTA ATTTGAAG-T ACATGTTCTT GTGATGATGA CTGCCAGATT 177 TTGGGGATAA TGATAAGTTT TGAG-TTTTA GAAGTTAA 64618 |||||||||| | ||| | | |||| ||||| ||| || TTGGGGATAA TAATAGTTGT TGAGTTTTTA GAAAAAAA 215 hqPGS_C08HBa0294K15.1+_SGN-E298638+ (64402 64618) ******************************************************************************** EST sequence 50 +strand 620 n (File: SGN-E238551+) 1 ACGCCTTTTG CTTTATGAAA CTAAAAAATA AAAATTGAAG TTTTGAAACG ATAGAGGTTT 61 AAAATTTGAA AGTCTGCTTA GAGAGTTAAG GCTTAGAAAG TTTAACTAAG ACGGAATCTT 121 AAAAGATTAA TATCTCAAAT TTGCAAAGTT TGGCTAAGTA AATCGTGATA AAAGTTCAAA 181 TAAATTTGCA AAGGGTAAAA ATAAAAATAA TCAAATAAGT TAGTCGTTGG AAAACCGTAT 241 TTAACGGAGT GTCTTAGGTG CCTTAAACAC CTTCCTAAGA CGCTAATAAG AATCCCGAAT 301 CCTAAAAAAT ATTTTCAAAA CGACTTTTCT GTTTAAATTG TTTTGAGAAT GAGTTTTCTT 361 GATTTTTCTT AAAAATTAAG TGGCGACTCC TAAAGTCGAA AAATACTTTA AAATAAAACA 421 AACTCTTTTC GAAAAATCAC CTTTTTTCGA TAAAACAAAG CTTCTAGCTT GGACTGGATC 481 TTCTTCTTCA TGTCTTGATG CCTTGAAGTT CCGGCATGGA CTAGCTGTTT ATGTATTTTA 541 GCTTCTTAGA TACTCTTAGA TTTAGTAATT CGAAGTAGAT GTTCTTGTGA TGATAACTTC 601 CAGATTTTGG GAAATAATAG Predicted gene structure (within gDNA segment 58578 to 65286): Exon 1 63382 63390 ( 9 n); cDNA 451 459 ( 9 n); score: 0.889 Intron 1 63391 64432 (1042 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.78) Exon 2 64433 64596 ( 164 n); cDNA 460 619 ( 160 n); score: 0.841 MATCH C08HBa0294K15.1+ SGN-E238551+ 0.841 173 0.279 C PGS_C08HBa0294K15.1+_SGN-E238551+ (63382 63390,64433 64596) Alignment (genomic DNA sequence = upper lines): TAAAAGAAAA AGAGTTTGAA TAAGGAAAAA TAGAAAGAAC AGAAGAGAGG GACGAACGAG 63441 ||||| ||| TAAAACAAA. .......... .......... .......... .......... .......... 459 CGAGAGAAGA TAGAACGAAG AGGAAAGCAA AGACCTTGAA GAGTAGCTTG CGTGATCACG 63501 .......... .......... .......... .......... .......... .......... 459 AATTCTTCGA TGGAAGTAGG TTATGGTTTA TGTTATTTCA TAGTAAACTC TTAATAGCGA 63561 .......... .......... .......... .......... .......... .......... 459 ATGATATGTA TTGGGTAGTA TTGTAAAGTC TTCTATATGC TTAATTGTAT GCTTGCATGA 63621 .......... .......... .......... .......... .......... .......... 459 TGTGATTATG TAAGTGTAAT GAGTTGGAAA GATGAGGTTG TGAAGCTTAA ACCTAAAACC 63681 .......... .......... .......... .......... .......... .......... 459 CTCTGTGTTA ATGATGATGC CTTGGTATAA AAGAAGGCTT GATGAACTAA AAGAATGAGG 63741 .......... .......... .......... .......... .......... .......... 459 TTAGTGGATC AGGTGTCACG TTCCGACACC AGGATAGTAG TAGTGAATCG GGTGTCACGT 63801 .......... .......... .......... .......... .......... .......... 459 TCCGACACTA GGATAGTAAT AGTGGATCGG GTCACGTTCC GACACCAGGA TAGTAATAGT 63861 .......... .......... .......... .......... .......... .......... 459 GGATCGGGTG TCACGTTCTG ACACCAAGAT ACTAGTAATG GATCGGGTGT CACGTTCCGA 63921 .......... .......... .......... .......... .......... .......... 459 CACCAGGATA GTAGTAATGG ATCGGGTATC ACGTTCCGAC ACCAGGATAG TAGTAGTGGA 63981 .......... .......... .......... .......... .......... .......... 459 TCGGGTGTCA CGGTAGTAGT GGATCGGGTG TCACGTTCTG ACACCAGGAT AGTAGTAGAG 64041 .......... .......... .......... .......... .......... .......... 459 GATCGGAGTG TCACGTTCCG ACACCAGGAT AGTAAAAAGA ATGAATCTTG AATCATGTTA 64101 .......... .......... .......... .......... .......... .......... 459 ATATACTCAG GTTTAAAGAA ACTATTTCCC AAACGAGTAT GGTGTGGAGG CGTGAGTACT 64161 .......... .......... .......... .......... .......... .......... 459 CATGGATGCG CTTGGGTTGT GGCCAATGGT TATGGTACTT GTTGTTGTTG TCTGTTGAGT 64221 .......... .......... .......... .......... .......... .......... 459 ATTGTAGTTG ATTTTATGTT ATTATCTGAT ATATGTTATT TTCTATTTTG AGTTGGCCGA 64281 .......... .......... .......... .......... .......... .......... 459 TGATACCTAC TCAGTACTTG TGCCTTGTAC TGACCCCTAC TTGTATGTTT CTTTCTTGTT 64341 .......... .......... .......... .......... .......... .......... 459 ATTTTTGGAG TGCAGCAAAC GTGCCATCGA CTTCGACTCA ACCGCAACTC TAGCCAGACT 64401 .......... .......... .......... .......... .......... .......... 459 TCAGCATAAT CAGATTTCAG GGTGAGCTAT TGTTCCTAGT TCGGACTGGA TTCTTTCCTT 64461 | | |||| | |||||||| | | | ||| .......... .......... .......... .GCTTCTAGC TTGGACTGGA TCTTCTTCTT 488 CGCGTCTTGA TGTCTTGAAG TTCGGACATG GACCATCTCT TTTACTTATT TTAGCTTCTT 64521 | ||||||| || ||||||| ||| | |||| ||| | || |||| |||| |||||||||| CATGTCTTGA TGCCTTGAAG TTCCGGCATG GACTAGCT-G TTTATGTATT TTAGCTTCTT 547 AGATACTCTT AGATTTAGTA ATTTGAGGAT AGATGTTCTT GTGATGATGA CTTCCAGATT 64581 |||||||||| |||||||||| ||| || | | |||||||||| |||||||| | |||||||||| AGATACTCTT AGATTTAGTA ATTCGAAG-T AGATGTTCTT GTGATGATAA CTTCCAGATT 606 TTGGGGATAA TGATA 64596 || |||| || | ||| TT-GGGA-AA TAATA 619 hqPGS_C08HBa0294K15.1+_SGN-E238551+ (64433 64596) ******************************************************************************** EST sequence 17 +strand 402 n (File: SGN-E352844+) 1 GGAGTGTCTT AGGTGCCTTA AACACCTTCC TAAGACGCTA ATAAGAATCC CGAATCCTAA 61 AAAATATTTT CAAAACGACT TTTCTGTTTA AATTGTTTTG AGAATGAGTT TTCTTGATTT 121 TTCTTAAAAA TTAAGTGGCG ACTCCTAAAG TCGAAAAATA CTTTAAAATA AAACAAACTC 181 TTTTCGAAAA ATCACCTTTT TTCGATAAAA CAAAGCTTCT AGCTTGGACT GGATCTTCTT 241 CTTCATGTCT TGATGCCTTG AAGTTCCGGC ATGGACTAGC TGTTTATGTA TTTTAGCTTC 301 TTAGATACTC TTAGATTTAG TAATTCGAAG TAGATGTTCT TGTGATGATA ACTTCCAGAT 361 TTTGGGAAAT AATAGTTATT GAATTGGTTT TTATAAAAAA AA Predicted gene structure (within gDNA segment 61028 to 65556): Exon 1 63382 63390 ( 9 n); cDNA 206 214 ( 9 n); score: 0.889 Intron 1 63391 64432 (1042 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.78) Exon 2 64433 64586 ( 154 n); cDNA 215 366 ( 152 n); score: 0.851 MATCH C08HBa0294K15.1+ SGN-E352844+ 0.851 163 0.405 C PGS_C08HBa0294K15.1+_SGN-E352844+ (63382 63390,64433 64586) Alignment (genomic DNA sequence = upper lines): TAAAAGAAAA AGAGTTTGAA TAAGGAAAAA TAGAAAGAAC AGAAGAGAGG GACGAACGAG 63441 ||||| ||| TAAAACAAA. .......... .......... .......... .......... .......... 214 CGAGAGAAGA TAGAACGAAG AGGAAAGCAA AGACCTTGAA GAGTAGCTTG CGTGATCACG 63501 .......... .......... .......... .......... .......... .......... 214 AATTCTTCGA TGGAAGTAGG TTATGGTTTA TGTTATTTCA TAGTAAACTC TTAATAGCGA 63561 .......... .......... .......... .......... .......... .......... 214 ATGATATGTA TTGGGTAGTA TTGTAAAGTC TTCTATATGC TTAATTGTAT GCTTGCATGA 63621 .......... .......... .......... .......... .......... .......... 214 TGTGATTATG TAAGTGTAAT GAGTTGGAAA GATGAGGTTG TGAAGCTTAA ACCTAAAACC 63681 .......... .......... .......... .......... .......... .......... 214 CTCTGTGTTA ATGATGATGC CTTGGTATAA AAGAAGGCTT GATGAACTAA AAGAATGAGG 63741 .......... .......... .......... .......... .......... .......... 214 TTAGTGGATC AGGTGTCACG TTCCGACACC AGGATAGTAG TAGTGAATCG GGTGTCACGT 63801 .......... .......... .......... .......... .......... .......... 214 TCCGACACTA GGATAGTAAT AGTGGATCGG GTCACGTTCC GACACCAGGA TAGTAATAGT 63861 .......... .......... .......... .......... .......... .......... 214 GGATCGGGTG TCACGTTCTG ACACCAAGAT ACTAGTAATG GATCGGGTGT CACGTTCCGA 63921 .......... .......... .......... .......... .......... .......... 214 CACCAGGATA GTAGTAATGG ATCGGGTATC ACGTTCCGAC ACCAGGATAG TAGTAGTGGA 63981 .......... .......... .......... .......... .......... .......... 214 TCGGGTGTCA CGGTAGTAGT GGATCGGGTG TCACGTTCTG ACACCAGGAT AGTAGTAGAG 64041 .......... .......... .......... .......... .......... .......... 214 GATCGGAGTG TCACGTTCCG ACACCAGGAT AGTAAAAAGA ATGAATCTTG AATCATGTTA 64101 .......... .......... .......... .......... .......... .......... 214 ATATACTCAG GTTTAAAGAA ACTATTTCCC AAACGAGTAT GGTGTGGAGG CGTGAGTACT 64161 .......... .......... .......... .......... .......... .......... 214 CATGGATGCG CTTGGGTTGT GGCCAATGGT TATGGTACTT GTTGTTGTTG TCTGTTGAGT 64221 .......... .......... .......... .......... .......... .......... 214 ATTGTAGTTG ATTTTATGTT ATTATCTGAT ATATGTTATT TTCTATTTTG AGTTGGCCGA 64281 .......... .......... .......... .......... .......... .......... 214 TGATACCTAC TCAGTACTTG TGCCTTGTAC TGACCCCTAC TTGTATGTTT CTTTCTTGTT 64341 .......... .......... .......... .......... .......... .......... 214 ATTTTTGGAG TGCAGCAAAC GTGCCATCGA CTTCGACTCA ACCGCAACTC TAGCCAGACT 64401 .......... .......... .......... .......... .......... .......... 214 TCAGCATAAT CAGATTTCAG GGTGAGCTAT TGTTCCTAGT TCGGACTGGA TTCTTTCCTT 64461 | | |||| | |||||||| | | | ||| .......... .......... .......... .GCTTCTAGC TTGGACTGGA TCTTCTTCTT 243 CGCGTCTTGA TGTCTTGAAG TTCGGACATG GACCATCTCT TTTACTTATT TTAGCTTCTT 64521 | ||||||| || ||||||| ||| | |||| ||| | || |||| |||| |||||||||| CATGTCTTGA TGCCTTGAAG TTCCGGCATG GACTAGCT-G TTTATGTATT TTAGCTTCTT 302 AGATACTCTT AGATTTAGTA ATTTGAGGAT AGATGTTCTT GTGATGATGA CTTCCAGATT 64581 |||||||||| |||||||||| ||| || | | |||||||||| |||||||| | |||||||||| AGATACTCTT AGATTTAGTA ATTCGAAG-T AGATGTTCTT GTGATGATAA CTTCCAGATT 361 TTGGG 64586 ||||| TTGGG 366 hqPGS_C08HBa0294K15.1+_SGN-E352844+ (64433 64586) ******************************************************************************** EST sequence 61 +strand 766 n (File: SGN-E369471+) 1 TTTTTTTTTT AAACTCTAAG TCGAAAACTT TATATACAAA ATGGTATAAA TATTATTATT 61 TAATTTACTA TCAGGTTATC GGTTAACCCA TTAAGAAAAA ACTTTAAACC GTTAAGAACC 121 GATACCCGAT AACAAAAAAA ATCAAAACCG ACATCAAAAC CACTAAACCA ATAACCCAAT 181 GATATAAACC AATAACTTTT TTATCGGTTC GGCTTATCGG TTTAGATTCG GTTTTGAACA 241 GCCCTACTCA AGTATATAAC CCTCAGAGAT AGGATGAGCT CTGTGAAAGA AACTTGAAAA 301 ACTCCTCTTT CCTTATTTCA AAGTTGTTCT TTGCATTGGT CAGCAATGTT TGCTCTCTCT 361 CTAAATCTTC CACACATCTT ACCCTTTCTC ACTTCAGCTC CTTCATCTGG ATCTCACTTC 421 CAAAATAGCT TTCACGTAGA TACAACCTTC CAGAACTCTT TGGAAATTTG ATTTGTACTT 481 CCCTTTTGCC TAGGGAAAAT ATGTCAGGAC TCTTTATGAT CCCACCATCC AATGATATGG 541 CTCCATCAAT TATTGGACTT ATATGTTCAA TAAATAAAAA AGCTCAACAA CGAAGCAAAT 601 AAGTACAATA ATACCTTTAC ACAACATTTA GTAAATTACT ATATTACCCC TGCCTAGAAA 661 AGTTGGAACG TTGACGAATA ATTGCTTTCC TAGCATCTTA TATATAGTTA TTAAAGTAAT 721 ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATAA Predicted gene structure (within gDNA segment 63209 to 71016): Exon 1 64830 65006 ( 177 n); cDNA 77 253 ( 177 n); score: 0.890 PPA cDNA 10 1 MATCH C08HBa0294K15.1+ SGN-E369471+ 0.890 177 0.231 C PGS_C08HBa0294K15.1+_SGN-E369471+ (64830 65006) Alignment (genomic DNA sequence = upper lines): TATCGGTTAA CCCGTTAAGA AAAAACTTCA AACCGTTAAG AACCGATAAC CCGATAACAA 64889 |||||||||| ||| |||||| |||||||| | |||||||||| ||||||| || |||||||||| TATCGGTTAA CCCATTAAGA AAAAACTTTA AACCGTTAAG AACCGAT-AC CCGATAACAA 135 AA-AAATCAA AACCGTTATT AAAACCACTA AACTAATAAC CCAATACTAT AAACCAATAA 64948 || ||||||| ||||| || |||||||||| ||| |||||| ||||| ||| |||||||||| AAAAAATCAA AACCGACATC AAAACCACTA AACCAATAAC CCAATGATAT AAACCAATAA 195 CTTTTTTATC GATTCGGCTT ATCGGTTTCG ATTCGATTTT GAACTGCCCT ATGGACGT 65006 |||||||||| | |||||||| |||||||| | ||||| |||| |||| ||||| | | || CTTTTTTATC GGTTCGGCTT ATCGGTTTAG ATTCGGTTTT GAACAGCCCT ACTCAAGT 253 hqPGS_C08HBa0294K15.1+_SGN-E369471+ (64830 65006) ******************************************************************************** EST sequence 7 +strand 654 n (File: SGN-E547448+) 1 CCCACCCCAA CCCCTATCCC CATACACCAG TGGTTATCTT CTTCCCCATC ATTCTAATGA 61 TTTCAAAATT CTTAGTATCA GTGGTTATCT TCTTCCCCCA CCATTCTAAT GGTTTCAAAA 121 TTCTTAGCAT TTTGTTTCAT TTATAAATTT TTCGAAGAGA TTCTTTTCCC CATCTTTCTC 181 TACCTAAAAA ACGAGATGAA GTAAAAAGTT ATAATTAATA AAAGCTGATG AAAAAAAAAT 241 TTGTAGGGTT AAAGATAGAA CTGTACAGGG AGGGGGGGTC GCCATTAATG GAGTTAAAGA 301 AAATGTATGT TTTGTTCCAG TTGAAGGCAG GGAGGTGTTT AGGTTTTACT TTTTTTTTAA 361 ATTTTTTTTA CTTTAAAATA ATTTTTATTT TTTTTACTTT ATAATATAAT GTTTAAATAA 421 TTTTTTGGAT TAAAAAATAA CACATGTCAT TATTTGATTG GTCAAATTGA CATGTCAGCG 481 CGAGTGTATT TCACACATTC TCTATTTTTT GTTTATTCTC GAAAAAATGT TCAAATGATT 541 CAAATTCAGA ATGGTTGAAG TGTTCAATAG GTAGTACGTC TAGTTGAGGT GTCTAAATGA 601 ATAATCGGGA CAAGTTTGAG TGGGCGCATA TGACTTTGGG CTATTTTATT CTAC Predicted gene structure (within gDNA segment 70747 to 72577): Exon 1 71509 72142 ( 634 n); cDNA 1 638 ( 638 n); score: 0.920 MATCH C08HBa0294K15.1+ SGN-E547448+ 0.920 634 0.969 C PGS_C08HBa0294K15.1+_SGN-E547448+ (71509 72142) Alignment (genomic DNA sequence = upper lines): CCCAACCCAA CCCCCATACC CATACACCAG TGGTTATCTT CTTCCCCCAT CATTCTAATG 71568 |||| ||||| |||| || || |||||||||| |||||||||| ||| |||||| |||||||||| CCCACCCCAA CCCCTATCCC CATACACCAG TGGTTATCTT CTT-CCCCAT CATTCTAATG 59 ATTTCAAAAT TCTTAGTATC AGTGGTTATA TTCTTCCCCC ACCATTCTAA TGGTTTCAAA 71628 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| ATTTCAAAAT TCTTAGTATC AGTGGTTATC TTCTTCCCCC ACCATTCTAA TGGTTTCAAA 119 ATTCTTAGCA TTTTGTTTCA TTTATAAATT TTTTGAAGAG ATTCTTTTCC CATTCTTTCT 71688 |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| | ||||||| ATTCTTAGCA TTTTGTTTCA TTTATAAATT TTTCGAAGAG ATTCTTTTCC CCATCTTTCT 179 CTACCTAAAA AACGAGATGA AGTAAAAAGT TATAATTAAT AAAAAAGCTG ATGAAAAAAA 71748 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| |||||||||| CTACCTAAAA AACGAGATGA AGTAAAAAGT TATAATTAAT --AAAAGCTG ATGAAAAAAA 237 AA-TTGTCGG ATTAAAGATG GAACCGTATA GGGAGGGGAG GGTAGCCATT AATGGAGTTA 71807 || |||| || |||||||| |||| ||| | |||||||| | ||| |||||| |||||||||| AATTTGTAGG GTTAAAGATA GAACTGTACA GGGAGGGG-G GGTCGCCATT AATGGAGTTA 296 GGGGAAATGT ATGTTTTGTT CCAGTTGAAG GCAGGGA--A GTTTAGGTTT TACTTTTTTT 71865 | |||||| |||||||||| |||||||||| ||||||| |||||||||| |||||||||| AAGAAAATGT ATGTTTTGTT CCAGTTGAAG GCAGGGAGGT GTTTAGGTTT TACTTTTTTT 356 TT-CA-TTTT TTTACTTTAA AATAATTTTT ATTTTTTTTA CTTTATAATA TAATGTGTAA 71923 || | |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| TTAAATTTTT TTTACTTTAA AATAATTTTT ATTTTTTTTA CTTTATAATA TAATGTTTAA 416 ATAATTTTTT GGATT-AAAA ATAACACATG TCATTATTTC ATTGGTCAAA TTGACATGTC 71982 |||||||||| ||||| |||| |||||||||| ||||||||| |||||||||| |||||||||| ATAATTTTTT GGATTAAAAA ATAACACATG TCATTATTTG ATTGGTCAAA TTGACATGTC 476 A--GCGAGTG TATTTCACAC ATCCTCTATT TTTTGTTTAT TCTCGAAAAA ATGTTCAAAT 72040 | ||||||| |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| AGCGCGAGTG TATTTCACAC ATTCTCTATT TTTTGTTTAT TCTCGAAAAA ATGTTCAAAT 536 CGTTCAAATT CAGAATGGTT GAAGTGTTCA ATAGATCGTA CGTCTAGTTG AGGTGTCTAA 72100 |||||||| |||||||||| |||||||||| |||| | ||| |||||||||| |||||||||| GATTCAAATT CAGAATGGTT GAAGTGTTCA ATAGGTAGTA CGTCTAGTTG AGGTGTCTAA 596 ATGAGTAATC GGGACAAGTT TGAGTGGCCG CATATGACTT TG 72142 |||| ||||| |||||||||| ||||||| || |||||||||| || ATGAATAATC GGGACAAGTT TGAGTGGGCG CATATGACTT TG 638 hqPGS_C08HBa0294K15.1+_SGN-E547448+ (71509 72142) Total number of EST alignments reported: 159 ________________________________________________________________________________ Predicted gene locations (12) in segment 1 to 72577: PGL 1 (- strand): 3375 2582 AGS-1 (2970 2582) SCR (e 0.837) Exon 1 2970 2582 ( 389 n); score: 0.837 PGS (2970 2582) SGN-E242274- 3-phase translation of AGS-1 (-strand): . . . . . . 2970 TTATTCCAAGGTTGTCTTCTTTAACCCCCAAGAAATTGAATTATTAACATTAAACCACTA L F Q G C L L - P P R N - I I N I K P L Y S K V V F F N P Q E I E L L T L N H - I P R L S S L T P K K L N Y - H - T T . . . . . . 2910 ACCTTATAATCATAAGCAGGAATAGTCCAAAACACCCCTTAAAAAATTTTAACAGAAATC T L - S - A G I V Q N T P - K I L T E I P Y N H K Q E - S K T P L K K F - Q K S N L I I I S R N S P K H P L K N F N R N . . . . . . 2850 CGACCCAGTCAGGGTTACTCAGTCTGTGACGGTCCGTCGTGCCTGCGATAGTCCGTCCTG R P S Q G Y S V C D G P S C L R - S V L D P V R V T Q S V T V R R A C D S P S C P T Q S G L L S L - R S V V P A I V R P . . . . . . 2790 CTAAGTCGTTACAGAGTTCAGAGACTCAATTTTTATTTAAGACCATGTGACGGTCCGTCG L S R Y R V Q R L N F Y L R P C D G P S - V V T E F R D S I F I - D H V T V R R A K S L Q S S E T Q F L F K T M - R S V . . . . . . 2730 TGCCTACGACGGTCCGTCCTGCTCTTCCGTTGCGAAGTTCAGAGAGTTGTTCTCAGTACC C L R R S V L L F R C E V Q R V V L S T A Y D G P S C S S V A K F R E L F S V P V P T T V R P A L P L R S S E S C S Q Y . . . . . . 2670 CAATTTTTCAGAAACTAAGTATTTTGGAACGAGACCCCCTCGACGGTCCGTCGTGCCCAT Q F F R N - V F W N E T P S T V R R A H N F S E T K Y F G T R P P R R S V V P M P I F Q K L S I L E R D P L D G P S C P . . . 2610 GACGGTCCGTCGTGGGATCCGTCAACCCA D G P S W D P S T T V R R G I R Q P - R S V V G S V N P Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (+strand): . . . . . . 2582 TGGGTTGACGGATCCCACGACGGACCGTCATGGGCACGACGGACCGTCGAGGGGGTCTCG W V D G S H D G P S W A R R T V E G V S G L T D P T T D R H G H D G P S R G S R G - R I P R R T V M G T T D R R G G L . . . . . . 2642 TTCCAAAATACTTAGTTTCTGAAAAATTGGGTACTGAGAACAACTCTCTGAACTTCGCAA F Q N T - F L K N W V L R T T L - T S Q S K I L S F - K I G Y - E Q L S E L R N V P K Y L V S E K L G T E N N S L N F A . . . . . . 2702 CGGAAGAGCAGGACGGACCGTCGTAGGCACGACGGACCGTCACATGGTCTTAAATAAAAA R K S R T D R R R H D G P S H G L K - K G R A G R T V V G T T D R H M V L N K N T E E Q D G P S - A R R T V T W S - I K . . . . . . 2762 TTGAGTCTCTGAACTCTGTAACGACTTAGCAGGACGGACTATCGCAGGCACGACGGACCG L S L - T L - R L S R T D Y R R H D G P - V S E L C N D L A G R T I A G T T D R I E S L N S V T T - Q D G L S Q A R R T . . . . . . 2822 TCACAGACTGAGTAACCCTGACTGGGTCGGATTTCTGTTAAAATTTTTTAAGGGGTGTTT S Q T E - P - L G R I S V K I F - G V F H R L S N P D W V G F L L K F F K G C F V T D - V T L T G S D F C - N F L R G V . . . . . . 2882 TGGACTATTCCTGCTTATGATTATAAGGTTAGTGGTTTAATGTTAATAATTCAATTTCTT W T I P A Y D Y K V S G L M L I I Q F L G L F L L M I I R L V V - C - - F N F L L D Y S C L - L - G - W F N V N N S I S . . . 2942 GGGGGTTAAAGAAGACAACCTTGGAATAA G G - R R Q P W N G V K E D N L G I W G L K K T T L E - Maximal non-overlapping open reading frames (>= 64 codons): none AGS-2 (3375 3140) SCR (e 0.775) Exon 1 3375 3140 ( 236 n); score: 0.775 PGS (3375 3140) SGN-E347579- 3-phase translation of AGS-2 (-strand): . . . . . . 3375 TTCATCAAGCCTTCTTTTATACCAAGGCATCATCATTAACAAAGAGGTCTTAAGGTTTAA F I K P S F I P R H H H - Q R G L K V - S S S L L L Y Q G I I I N K E V L R F K H Q A F F Y T K A S S L T K R S - G L . . . . . . 3315 GATTCAATAGCCTCATCATGCTTATTTTATCACAATTATATAATCACGTCATGCAAGCAC D S I A S S C L F Y H N Y I I T S C K H I Q - P H H A Y F I T I I - S R H A S T R F N S L I M L I L S Q L Y N H V M Q A . . . . . . 3255 ACAATTAAGCATATAGAAGACTTTACAATACTACCCAACACATATCATTCGCTATTAAGA T I K H I E D F T I L P N T Y H S L L R Q L S I - K T L Q Y Y P T H I I R Y - E H N - A Y R R L Y N T T Q H I S F A I K . . . . . . 3195 GTTTACTATGAAATAGCATAAACCATAACCTACCTCCAGCGAAGAATTCGTGATCA V Y Y E I A - T I T Y L Q R R I R D F T M K - H K P - P T S S E E F V I S L L - N S I N H N L P P A K N S - S Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-2 (+strand): . . . . . . 3140 TGATCACGAATTCTTCGCTGGAGGTAGGTTATGGTTTATGCTATTTCATAGTAAACTCTT - S R I L R W R - V M V Y A I S - - T L D H E F F A G G R L W F M L F H S K L L I T N S S L E V G Y G L C Y F I V N S . . . . . . 3200 AATAGCGAATGATATGTGTTGGGTAGTATTGTAAAGTCTTCTATATGCTTAATTGTGTGC N S E - Y V L G S I V K S S I C L I V C I A N D M C W V V L - S L L Y A - L C A - - R M I C V G - Y C K V F Y M L N C V . . . . . . 3260 TTGCATGACGTGATTATATAATTGTGATAAAATAAGCATGATGAGGCTATTGAATCTTAA L H D V I I - L - - N K H D E A I E S - C M T - L Y N C D K I S M M R L L N L K L A - R D Y I I V I K - A - - G Y - I L . . . . . . 3320 ACCTTAAGACCTCTTTGTTAATGATGATGCCTTGGTATAAAAGAAGGCTTGATGAA T L R P L C - - - C L G I K E G L M P - D L F V N D D A L V - K K A - - N L K T S L L M M M P W Y K R R L D E Maximal non-overlapping open reading frames (>= 64 codons): none PGL 2 (+ strand): 3373 4517 AGS-1 (3373 4517) SCR (e 0.812) Exon 1 3373 4517 (1145 n); score: 0.812 PGS (3373 3949) SGN-E241789- PGS (3381 4056) SGN-E546506- PGS (3396 3716) SGN-E242359+ PGS (3509 3907) SGN-E246710+ PGS (3734 4461) SGN-E351546+ PGS (3734 4386) SGN-E356696+ PGS (3734 4315) SGN-E356206+ PGS (3813 4220) SGN-E542084- PGS (3815 4478) SGN-E392027- PGS (3816 4220) SGN-E370357- PGS (3816 4103) SGN-E546219- PGS (3818 4077) SGN-E373117+ PGS (3818 4077) SGN-E373116- PGS (3862 4077) SGN-E298638+ PGS (3893 4055) SGN-E238551+ PGS (4238 4517) SGN-E355114+ 3-phase translation of AGS-1 (+strand): . . . . . . 3373 GAACTGAAAGAATGAGAATTAGGGGATCGGAGTGTCACGTTTCGACACCAGGATAGTATG E L K E - E L G D R S V T F R H Q D S M N - K N E N - G I G V S R F D T R I V W T E R M R I R G S E C H V S T P G - Y . . . . . . 3433 GATCGGGTGTCACGTTCCGACACCAGGATAGTATAGATCGGGTGTCACGTTCCGACACCA D R V S R S D T R I V - I G C H V P T P I G C H V P T P G - Y R S G V T F R H Q G S G V T F R H Q D S I D R V S R S D T . . . . . . 3493 GGATAGTATGGATCGGGTGTCACGTTTTGACACCAGGATAGTAAAGAGAATGAATCTTGA G - Y G S G V T F - H Q D S K E N E S - D S M D R V S R F D T R I V K R M N L E R I V W I G C H V L T P G - - R E - I L . . . . . . 3553 ATTATGCTAATATACTCAGATTTAATGAACCTGTTTCCCAAATGAGTATGGTGTGGAGGC I M L I Y S D L M N L F P K - V W C G G L C - Y T Q I - - T C F P N E Y G V E A N Y A N I L R F N E P V S Q M S M V W R . . . . . . 3613 TTGAGTCCTCATAGATGTGCTTGGGTTGTGCCCAATGGTTATGGTACTTGTTGTTGTCAC L S P H R C A W V V P N G Y G T C C C H - V L I D V L G L C P M V M V L V V V T L E S S - M C L G C A Q W L W Y L L L S . . . . . . 3673 CTGTTTAGTATTGTAGTTGATTTTATGTTATTATCTGATATATATTGCTTTCTATTTTGA L F S I V V D F M L L S D I Y C F L F - C L V L - L I L C Y Y L I Y I A F Y F E P V - Y C S - F Y V I I - Y I L L S I L . . . . . . 3733 GTTGGCCGATGATACCTACTCAGTACTTGTGCCTTGTACTGACCCCTACTTGTATGTTTC V G R - Y L L S T C A L Y - P L L V C F L A D D T Y S V L V P C T D P Y L Y V S S W P M I P T Q Y L C L V L T P T C M F . . . . . . 3793 TTTCTTTGTTATTTGTGGAGTGCAGCAAACGTGCCACAACTTCGACTCAACCGCAACTCT F L C Y L W S A A N V P Q L R L N R N S F F V I C G V Q Q T C H N F D S T A T L L S L L F V E C S K R A T T S T Q P Q L . . . . . . 3853 AGCCAGACTTCAGCATAATCAGATTTCAGGTGAGCTATTGTTCCTAGCTCGGACTGGATT S Q T S A - S D F R - A I V P S S D W I A R L Q H N Q I S G E L L F L A R T G F - P D F S I I R F Q V S Y C S - L G L D . . . . . . 3913 CTTTCTTTCAGGTCTTGATGTCTTGAAGTTCGGACATGGACCATCTCTTTTATTTATTTT L S F R S - C L E V R T W T I S F I Y F F L S G L D V L K F G H G P S L L F I L S F F Q V L M S - S S D M D H L F Y L F . . . . . . 3973 AGCTTCTTAGATACTCTTAGATTTAGTAATTTGAGGATAGATGTTCTTGTGATGATGACT S F L D T L R F S N L R I D V L V M M T A S - I L L D L V I - G - M F L - - - L - L L R Y S - I - - F E D R C S C D D D . . . . . . 4033 TCCAGATTTTGGGGATAATGATAAGTTTTGAGTTTTAGAAGTTAATTATTGATTTCGTTA S R F W G - - - V L S F R S - L L I S L P D F G D N D K F - V L E V N Y - F R - F Q I L G I M I S F E F - K L I I D F V . . . . . . 4093 ATGAGTTTTAAGTTTTCCGTATTATATTCTGTTTATTATGGTTGAAATGTTGGGGTTTAG M S F K F S V L Y S V Y Y G - N V G V - - V L S F P Y Y I L F I M V E M L G F R N E F - V F R I I F C L L W L K C W G L . . . . . . 4153 ATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCACTCACGGCTCGTTTTGGG I G W F A H I G G - V W V P L T A R F G L V G S L T - E G K C G C H S R L V L G D W L V R S H R R V S V G A T H G S F W . . . . . . 4213 TCGTGACAAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATCACACAAGAACAAGTC S - Q T W Y Q S I R F V G L I T Q E Q V R D K L G I R A L G S L V S S H K N K S V V T N L V S E H - V R W S H H T R T S . . . . . . 4273 TAGTAGAGTCTTGAGGAATGGTAGGGGGACGCCTTTACTTTTCTTTGAGAGGCTATAAGA - - S L E E W - G D A F T F L - E A I R S R V L R N G R G T P L L F F E R L - D L V E S - G M V G G R L Y F S L R G Y K . . . . . . 4333 CTTAAGGAAAATTCCATTCTTTCTTTCTTTCGTGCTATTACTTGGATCCAATTGGTATCT L K E N S I L S F F R A I T W I Q L V S L R K I P F F L S F V L L L G S N W Y L T - G K F H S F F L S C Y Y L D P I G I . . . . . . 4393 AGGTGATACAAATTGGTATCTGACCATCTTCACTCTATTTCGCAGATGGTTAGAACTAGA R - Y K L V S D H L H S I S Q M V R T R G D T N W Y L T I F T L F R R W L E L E - V I Q I G I - P S S L Y F A D G - N - . . . . . . 4453 GCAACAGCTGCGCCGACACCAACACCGGCAAAACAAGATGCGTCTGAACCAGCCACTGAG A T A A P T P T P A K Q D A S E P A T E Q Q L R R H Q H R Q N K M R L N Q P L R S N S C A D T N T G K T R C V - T S H - . 4513 GCTGT A L G C Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-2_AGS-1_PPS_1 (3689 3982) (frame '2'; 291 bp, 97 residues) 1 LILCYYLIYI AFYFELADDT YSVLVPCTDP YLYVSFFVIC GVQQTCHNFD STATLARLQH 61 NQISGELLFL ARTGFFLSGL DVLKFGHGPS LLFILAS- 3-phase translation of AGS-1 (-strand): . . . . . . 4517 ACAGCCTCAGTGGCTGGTTCAGACGCATCTTGTTTTGCCGGTGTTGGTGTCGGCGCAGCT T A S V A G S D A S C F A G V G V G A A Q P Q W L V Q T H L V L P V L V S A Q L S L S G W F R R I L F C R C W C R R S . . . . . . 4457 GTTGCTCTAGTTCTAACCATCTGCGAAATAGAGTGAAGATGGTCAGATACCAATTTGTAT V A L V L T I C E I E - R W S D T N L Y L L - F - P S A K - S E D G Q I P I C I C C S S S N H L R N R V K M V R Y Q F V . . . . . . 4397 CACCTAGATACCAATTGGATCCAAGTAATAGCACGAAAGAAAGAAAGAATGGAATTTTCC H L D T N W I Q V I A R K K E R M E F S T - I P I G S K - - H E R K K E W N F P S P R Y Q L D P S N S T K E R K N G I F . . . . . . 4337 TTAAGTCTTATAGCCTCTCAAAGAAAAGTAAAGGCGTCCCCCTACCATTCCTCAAGACTC L S L I A S Q R K V K A S P Y H S S R L - V L - P L K E K - R R P P T I P Q D S L K S Y S L S K K S K G V P L P F L K T . . . . . . 4277 TACTAGACTTGTTCTTGTGTGATGAGACCAACGAACCTAATGCTCTGATACCAAGTTTGT Y - T C S C V M R P T N L M L - Y Q V C T R L V L V - - D Q R T - C S D T K F V L L D L F L C D E T N E P N A L I P S L . . . . . . 4217 CACGACCCAAAACGAGCCGTGAGTGGCACCCACACTTACCCTCCTATGTGAGCGAACCAA H D P K R A V S G T H T Y P P M - A N Q T T Q N E P - V A P T L T L L C E R T N S R P K T S R E W H P H L P S Y V S E P . . . . . . 4157 CCAATCTAAACCCCAACATTTCAACCATAATAAACAGAATATAATACGGAAAACTTAAAA P I - T P T F Q P - - T E Y N T E N L K Q S K P Q H F N H N K Q N I I R K T - N T N L N P N I S T I I N R I - Y G K L K . . . . . . 4097 CTCATTAACGAAATCAATAATTAACTTCTAAAACTCAAAACTTATCATTATCCCCAAAAT L I N E I N N - L L K L K T Y H Y P Q N S L T K S I I N F - N S K L I I I P K I T H - R N Q - L T S K T Q N L S L S P K . . . . . . 4037 CTGGAAGTCATCATCACAAGAACATCTATCCTCAAATTACTAAATCTAAGAGTATCTAAG L E V I I T R T S I L K L L N L R V S K W K S S S Q E H L S S N Y - I - E Y L R S G S H H H K N I Y P Q I T K S K S I - . . . . . . 3977 AAGCTAAAATAAATAAAAGAGATGGTCCATGTCCGAACTTCAAGACATCAAGACCTGAAA K L K - I K E M V H V R T S R H Q D L K S - N K - K R W S M S E L Q D I K T - K E A K I N K R D G P C P N F K T S R P E . . . . . . 3917 GAAAGAATCCAGTCCGAGCTAGGAACAATAGCTCACCTGAAATCTGATTATGCTGAAGTC E R I Q S E L G T I A H L K S D Y A E V K E S S P S - E Q - L T - N L I M L K S R K N P V R A R N N S S P E I - L C - S . . . . . . 3857 TGGCTAGAGTTGCGGTTGAGTCGAAGTTGTGGCACGTTTGCTGCACTCCACAAATAACAA W L E L R L S R S C G T F A A L H K - Q G - S C G - V E V V A R L L H S T N N K L A R V A V E S K L W H V C C T P Q I T . . . . . . 3797 AGAAAGAAACATACAAGTAGGGGTCAGTACAAGGCACAAGTACTGAGTAGGTATCATCGG R K K H T S R G Q Y K A Q V L S R Y H R E R N I Q V G V S T R H K Y - V G I I G K K E T Y K - G S V Q G T S T E - V S S . . . . . . 3737 CCAACTCAAAATAGAAAGCAATATATATCAGATAATAACATAAAATCAACTACAATACTA P T Q N R K Q Y I S D N N I K S T T I L Q L K I E S N I Y Q I I T - N Q L Q Y - A N S K - K A I Y I R - - H K I N Y N T . . . . . . 3677 AACAGGTGACAACAACAAGTACCATAACCATTGGGCACAACCCAAGCACATCTATGAGGA N R - Q Q Q V P - P L G T T Q A H L - G T G D N N K Y H N H W A Q P K H I Y E D K Q V T T T S T I T I G H N P S T S M R . . . . . . 3617 CTCAAGCCTCCACACCATACTCATTTGGGAAACAGGTTCATTAAATCTGAGTATATTAGC L K P P H H T H L G N R F I K S E Y I S S S L H T I L I W E T G S L N L S I L A T Q A S T P Y S F G K Q V H - I - V Y - . . . . . . 3557 ATAATTCAAGATTCATTCTCTTTACTATCCTGGTGTCAAAACGTGACACCCGATCCATAC I I Q D S F S L L S W C Q N V T P D P Y - F K I H S L Y Y P G V K T - H P I H T H N S R F I L F T I L V S K R D T R S I . . . . . . 3497 TATCCTGGTGTCGGAACGTGACACCCGATCTATACTATCCTGGTGTCGGAACGTGACACC Y P G V G T - H P I Y T I L V S E R D T I L V S E R D T R S I L S W C R N V T P L S W C R N V T P D L Y Y P G V G T - H . . . . . . 3437 CGATCCATACTATCCTGGTGTCGAAACGTGACACTCCGATCCCCTAATTCTCATTCTTTC R S I L S W C R N V T L R S P N S H S F D P Y Y P G V E T - H S D P L I L I L S P I H T I L V S K R D T P I P - F S F F . 3377 AGTTC S V Q F Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-2_AGS-1_PPS_1 (4515 4114) (frame '0'; 399 bp, 133 residues) 1 SLSGWFRRIL FCRCWCRRSC CSSSNHLRNR VKMVRYQFVS PRYQLDPSNS TKERKNGIFL 61 KSYSLSKKSK GVPLPFLKTL LDLFLCDETN EPNALIPSLS RPKTSREWHP HLPSYVSEPT 121 NLNPNISTII NRI- AGS-2 (3893 4063,4153 4159) SCR (e 0.842 d 0.000 a 0.994,e 1.000) Exon 1 3893 4063 ( 171 n); score: 0.842 Intron 1 4064 4152 ( 89 n); Pd: 0.000 Pa: 0.994 Exon 2 4153 4159 ( 7 n); score: 1.000 PGS (3893 4063,4153 4159) SGN-E352844+ 3-phase translation of AGS-2 (+strand): . . . . . . 3893 TTCCTAGCTCGGACTGGATTCTTTCTTTCAGGTCTTGATGTCTTGAAGTTCGGACATGGA F L A R T G F F L S G L D V L K F G H G S - L G L D S F F Q V L M S - S S D M D P S S D W I L S F R S - C L E V R T W . . . . . . 3953 CCATCTCTTTTATTTATTTTAGCTTCTTAGATACTCTTAGATTTAGTAATTTGAGGATAG P S L L F I L A S - I L L D L V I - G - H L F Y L F - L L R Y S - I - - F E D R T I S F I Y F S F L D T L R F S N L R I . . . . . . : 4013 ATGTTCTTGTGATGATGACTTCCAGATTTTGGGGATAATGATAAGTTTTGA : ATTGGTT M F L - - - L P D F G D N D K F - : I G C S C D D D F Q I L G I M I S F E : L V D V L V M M T S R F W G - - - V L : N W Maximal non-overlapping open reading frames (>= 64 codons): none PGL 3 (- strand): 11131 4556 AGS-1 (7221 5586,5550 4556) SCR (e 0.867 d 0.000 a 0.000,e 0.858) Exon 1 7221 5586 (1636 n); score: 0.867 Intron 1 5585 5551 ( 35 n); Pd: 0.000 Pa: 0.000 Exon 2 5550 4556 ( 995 n); score: 0.858 PGS (5096 4556) SGN-E329287- PGS (4908 4556) SGN-E352180+ PGS (5265 4558) SGN-E356614+ PGS (5263 4600) SGN-E352401+ PGS (5939 5586,5550 5114) SGN-E356912+ PGS (5937 5586,5550 5368) SGN-E353805+ PGS (6405 5864) SGN-E355026+ PGS (6633 5872) SGN-E355244+ PGS (6230 5900) SGN-E352716+ PGS (6590 5930) SGN-E352117- PGS (6633 5973) SGN-E351414+ PGS (6702 6044) SGN-E355232+ PGS (7151 6473) SGN-E368762+ PGS (7221 6510) SGN-E379315+ PGS (7221 6627) SGN-E375319+ PGS (6838 6678) SGN-E578078+ PGS (7221 6697) SGN-E204434+ PGS (7151 6793) SGN-E240817+ 3-phase translation of AGS-1 (-strand): . . . . . . 7221 AATCCCTTGACAAATCGACGGTAGTAGCTAGCTAAACCAACGAAGCTCCTTACCTCTGTA N P L T N R R - - L A K P T K L L T S V I P - Q I D G S S - L N Q R S S L P L - S L D K S T V V A S - T N E A P Y L C . . . . . . 7161 ACATTAGTAGGTCTTACCCAACTCTTCACTGCTTCGACCTTAGAAGGATCCACCATCACT T L V G L T Q L F T A S T L E G S T I T H - - V L P N S S L L R P - K D P P S L N I S R S Y P T L H C F D L R R I H H H . . . . . . 7101 TCATCCTTATAAACCACACGCCCCAAGAAGGACACTGAATCTAGCCAAAACTCACACTTA S S L - T T R P K K D T E S S Q N S H L H P Y K P H A P R R T L N L A K T H T - F I L I N H T P Q E G H - I - P K L T L . . . . . . 7041 GAGAATTTGGCATAAAGCTCTTTCTCCCTCAACATTTCCAATACCATTCTCAAGTGCTCC E N L A - S S F S L N I S N T I L K C S R I W H K A L S P S T F P I P F S S A P R E F G I K L F L P Q H F Q Y H S Q V L . . . . . . 6981 TCATGTTCTTTCTTGCTCTTTGAGTATACCAGTATGTCATCGATGAATACAATGACGAAG S C S F L L F E Y T S M S S M N T M T K H V L S C S L S I P V C H R - I Q - R R L M F F L A L - V Y Q Y V I D E Y N D E . . . . . . 6921 AGATCCAGATATGGCTTAAAAATCCCGCTCATTAAGCTCATGAAAGCAGCAGGGGAATTC R S R Y G L K I P L I K L M K A A G E F D P D M A - K S R S L S S - K Q Q G N S E I Q I W L K N P A H - A H E S S R G I . . . . . . 6861 GTAAGCCCAAAAGACATTACTAGGAACTCATAATGCCCATACGTGGTCCAAAAAGCAGTC V S P K D I T R N S - C P Y V V Q K A V - A Q K T L L G T H N A H T W S K K Q S R K P K R H Y - E L I M P I R G P K S S . . . . . . 6801 TTGGGCACATCCGTTGCCCGTATTTTTAATTGATGATAACCAGATCTCAAATCAATTTTT L G T S V A R I F N - - - P D L K S I F W A H P L P V F L I D D N Q I S N Q F F L G H I R C P Y F - L M I T R S Q I N F . . . . . . 6741 TAGAAGGTACAAGCACCTTGTAACTGATCGAACAAATCATCGATGCGAGGAAGAGGATAC - K V Q A P C N - S N K S S M R G R G Y R R Y K H L V T D R T N H R C E E E D T L E G T S T L - L I E Q I I D A R K R I . . . . . . 6681 TTGTTCTTAATGATTACCTTATTCAGTTGCCTATAGTCTATGCACATCCGAAAACTTCCA L F L M I T L F S C L - S M H I R K L P C S - - L P Y S V A Y S L C T S E N F H L V L N D Y L I Q L P I V Y A H P K T S . . . . . . 6621 TCCTTCTTCTTCACAAATAAAATAGGAGCACCCCAAGGGGATGCACTTGGTCTAATAAAG S F F F T N K I G A P Q G D A L G L I K P S S S Q I K - E H P K G M H L V - - S I L L L H K - N R S T P R G C T W S N K . . . . . . 6561 CCTTTGCTTAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCAGCGGGAGCCATC P L L N N S - S W A F N S L N S A G A I L C L T T L E V G P L T L L T Q R E P S A F A - Q L L K L G L - L S - L S G S H . . . . . . 6501 CTATAATGGGGTATGGAAATGGGGCGAGTACCCGGCTCCAGATCAATACAGAAATAAATA L - W G M E M G R V P G S R S I Q K - I Y N G V W K W G E Y P A P D Q Y R N K Y P I M G Y G N G A S T R L Q I N T E I N . . . . . . 6441 TCTCTATTCGGTGGCATACGAGGAAGGTCTGCAGGAAACACATCTAGAAACTCACGGACT S L F G G I R G R S A G N T S R N S R T L Y S V A Y E E G L Q E T H L E T H G L I S I R W H T R K V C R K H I - K L T D . . . . . . 6381 ATCGAAATCGACTCAATTGAAGGTACTTGGGTAGTATCATCCTAGAGGTGTGTCAAGAAA I E I D S I E G T W V V S S - R C V K K S K S T Q L K V L G - Y H P R G V S R K Y R N R L N - R Y L G S I I L E V C Q E . . . . . . 6321 GCTAAACAACCCTTACTAACCATTCTCTTAGCACGAAGAAAGGAGATAATACGAAATGGA A K Q P L L T I L L A R R K E I I R N G L N N P Y - P F S - H E E R R - Y E M E S - T T L T N H S L S T K K G D N T K W . . . . . . 6261 GTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCCGACGTTACA V E V - S P S H T N G S V P G L A D V T W K C S H P P T L T D L S Q A W P T L Q S G S V V T L P H - R I C P R L G R R Y . . . . . . 6201 GTTTTAGCATTACAATCTAAGATTGCAAAATTTGGAGACAGCCAAGTCATACCCAGAATT V L A L Q S K I A K F G D S Q V I P R I F - H Y N L R L Q N L E T A K S Y P E L S F S I T I - D C K I W R Q P S H T Q N . . . . . . 6141 ACATCGAAGTCAACCATTTCTAAGATAACCAAGTCTACATGAGTATTGTTCCCCACAAAA T S K S T I S K I T K S T - V L F P T K H R S Q P F L R - P S L H E Y C S P Q K Y I E V N H F - D N Q V Y M S I V P H K . . . . . . 6081 GTCACAAGACAAGACCTATACACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAA V T R Q D L Y T F S T I T D S P T G V E S Q D K T Y T L F Q L S Q T H P P E - K S H K T R P I H F F N Y H R L T H R S R . . . . . . 6021 ACACGAATAGGTATGTCAAGCAATTCATAATGTAAATTAAGACCAGTAGCAAATGAGGAA T R I G M S S N S - C K L R P V A N E E H E - V C Q A I H N V N - D Q - Q M R K N T N R Y V K Q F I M - I K T S S K - G . . . . . . 5961 GATACATATGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACC D T Y E N V D P G S N N T E A M Q S Q T I H M K M W I Q D Q T I Q K P C N H K P R Y I - K C G S R I K Q Y R S H A I T N . . . . . . 5901 AAAAGATTACCTGTGATGACGGCATCAGATGTCTCCGCTTCAGACCTCCCAGGGAAAGCA K R L P V M T A S D V S A S D L P G K A K D Y L - - R H Q M S P L Q T S Q G K H Q K I T C D D G I R C L R F R P P R E S . . . . . . 5841 TAACAATGGGCCCTATCACCGGTCTGCCCGTTGCCCCTACAATGTTGAGCTACAGAAGTT - Q W A L S P V C P L P L Q C - A T E V N N G P Y H R S A R C P Y N V E L Q K F I T M G P I T G L P V A P T M L S Y R S . . . . . . 5781 CCAGTTTGCCTGTCACCCCGGCCGTTTTGGTGACCACCATTACCTCGGCCACCACGTCCT P V C L S P R P F W - P P L P R P P R P Q F A C H P G R F G D H H Y L G H H V L S S L P V T P A V L V T T I T S A T T S . . . . . . 5721 CCAGAATAGCGACCTCTCCCATGACCACCTCTACCTCTGACTATTGGGGGTCTGTAACTC P E - R P L P - P P L P L T I G G L - L Q N S D L S H D H L Y L - L L G V C N S S R I A T S P M T T S T S D Y W G S V T . . . . . . 5661 TGTTTTGGACAATACCTCTTAATATGTCCAGTCTCTCCACATCCATAACACTCTCTTGAT C F G Q Y L L I C P V S P H P - H S L D V L D N T S - Y V Q S L H I H N T L L I L F W T I P L N M S S L S T S I T L S - . . : . . . . 5601 TAAAGCATAGGTCTCT : TCAGAGAAATGTTGACCGGTCTGCGGTGGACCCCCAGCTACAGC - S I G L : F R E M L T G L R W T P S Y S K A - V S : S E K C - P V C G G P P A T A L K H R S L : Q R N V D R S A V D P Q L Q . . . . . . 5506 TTGTAGTGAAGACTGAATAGGTCGGGCTGGATAACCTCCTGAACTCTGCCCTCTGGATTA L - - R L N R S G W I T S - T L P S G L C S E D - I G R A G - P P E L C P L D - L V V K T E - V G L D N L L N S A L W I . . . . . . 5446 AAAACCATTAAAATCACCTCCTTTATGAAACTTCTTAGATATTGATGCCATGGTGAAGTC K T I K I T S F M K L L R Y - C H G E V K P L K S P P L - N F L D I D A M V K S K N H - N H L L Y E T S - I L M P W - S . . . . . . 5386 GTCTGGCTTCACTCCCTCCACTTCTATTACAAAATCTACCACCTCCTGAAAGGATTTTGC V W L H S L H F Y Y K I Y H L L K G F C S G F T P S T S I T K S T T S - K D F A R L A S L P P L L L Q N L P P P E R I L . . . . . . 5326 TGCAGCAGCTACCTGTAAGGCTGAAATCCGCAAATCTGACCTCAACCCTTTCACGAAACG C S S Y L - G - N P Q I - P Q P F H E T A A A T C K A E I R K S D L N P F T K R L Q Q L P V R L K S A N L T S T L S R N . . . . . . 5266 ACGAATCCGCTCTTGTGGACTGAAGCAAAGCTGGGTGGCATACCTGGATAGTGCACAAAA T N P L L W T E A K L G G I P G - C T K R I R S C G L K Q S W V A Y L D S A Q N D E S A L V D - S K A G W H T W I V H K . . . . . . 5206 CTTAGCCTCATAAGCAGTAACCGACATCCTGCCTTGCTCTAAGCTCAGGAACTTATCTCT L S L I S S N R H P A L L - A Q E L I S L A S - A V T D I L P C S K L R N L S L T - P H K Q - P T S C L A L S S G T Y L . . . . . . 5146 CCTCCTATCCCTCAAAGTCCGAGGTATATAATTCTCCATAAACAAGCTAGAGAATGATGC P P I P Q S P R Y I I L H K Q A R E - C L L S L K V R G I - F S I N K L E N D A S S Y P S K S E V Y N S P - T S - R M M . . . . . . 5086 CCAAGTCATAGGTGGTGACTGTGCTGGTTGACACTCAACATATGACCGCCACCACATTTT P S H R W - L C W L T L N I - P P P H F Q V I G G D C A G - H S T Y D R H H I L P K S - V V T V L V D T Q H M T A T T F . . . . . . 5026 GGCGTTCCCCTAAAACTGATAGGTCACAAACTCAACGCCAAATCGTTCCACTATGCGCAT G V P L K L I G H K L N A K S F H Y A H A F P - N - - V T N S T P N R S T M R I W R S P K T D R S Q T Q R Q I V P L C A . . . . . . 4966 CTTATGTAGCAACTCATGACAATCAACCAGAAAGTCATAGGCATCCTCAGATTCAGCACC L M - Q L M T I N Q K V I G I L R F S T L C S N S - Q S T R K S - A S S D S A P S Y V A T H D N Q P E S H R H P Q I Q H . . . . . . 4906 CTTGAAAACTGGAGGTTTCAACTTCAAGAACTTACTGAAAAGTTCGTGCTGGTCACTTGT L E N W R F Q L Q E L T E K F V L V T C L K T G G F N F K N L L K S S C W S L V P - K L E V S T S R T Y - K V R A G H L . . . . . . 4846 CATTATAGGCCCTGTAGTCAACCGAGGAAACGTGCCTATTTCCAATGAGGCATCCATGCG H Y R P C S Q P R K R A Y F Q - G I H A I I G P V V N R G N V P I S N E A S M R S L - A L - S T E E T C L F P M R H P C . . . . . . 4786 GGGAGCCACAGCAGCTGTATGTTGTACTCCCGGAACCTGAGGTACTGGTGCAGAAAACAC G S H S S C M L Y S R N L R Y W C R K H G A T A A V C C T P G T - G T G A E N T G E P Q Q L Y V V L P E P E V L V Q K T . . . . . . 4726 TGGAGGTGTCTGGCCTTGATCAGATAACCCGCTAAGATAAGCAAGAACCTGATTAATCAT W R C L A L I R - P A K I S K N L I N H G G V W P - S D N P L R - A R T - L I I L E V S G L D Q I T R - D K Q E P D - S . . . . . . 4666 CTCTAGGGTAGGTTGGGGTGGTAATTCCTCGTTCTGCACTTGTTCATTTCCCCCTTCCTC L - G R L G W - F L V L H L F I S P F L S R V G W G G N S S F C T C S F P P S S S L G - V G V V I P R S A L V H F P L P . . . . . . 4606 ACCCTCTCTTAATACTTCCTCAGTCGGTGGAGGAGTCACCGCCCTAGTACC T L S - Y F L S R W R S H R P S T P S L N T S S V G G G V T A L V H P L L I L P Q S V E E S P P - Y Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-3_AGS-1_PPS_1 (5950 5603) (frame '0'; 345 bp, 115 residues) 1 KCGSRIKQYR SHAITNQKIT CDDGIRCLRF RPPRESITMG PITGLPVAPT MLSYRSSSLP 61 VTPAVLVTTI TSATTSSRIA TSPMTTSTSD YWGSVTLFWT IPLNMSSLST SITLS- >C08HBa0294K15.1-_PGL-3_AGS-1_PPS_2 (6563 6348) (frame '2'; 213 bp, 71 residues) 1 SLCLTTLEVG PLTLLTQREP SYNGVWKWGE YPAPDQYRNK YLYSVAYEEG LQETHLETHG 61 LSKSTQLKVL G- >C08HBa0294K15.1-_PGL-3_AGS-1_PPS_3 (7026 6829) (frame '1'; 195 bp, 65 residues) 1 SSFSLNISNT ILKCSSCSFL LFEYTSMSSM NTMTKRSRYG LKIPLIKLMK AAGEFVSPKD 61 ITRNS- AGS-2 (6023 5587,5550 5130) SCR (e 0.879 d 0.000 a 0.000,e 0.843) Exon 1 6023 5587 ( 437 n); score: 0.879 Intron 1 5586 5551 ( 36 n); Pd: 0.000 Pa: 0.000 Exon 2 5550 5130 ( 421 n); score: 0.843 PGS (5863 5587,5550 5130) SGN-E356209+ PGS (6019 5587,5550 5220) SGN-E214046+ PGS (6023 5587,5550 5429) SGN-E244046+ 3-phase translation of AGS-2 (-strand): . . . . . . 6023 AAACACGAATAGGTATGTCAAGCAATTCATAATGTAAATTAAGACCAGTAGCAAATGAGG K H E - V C Q A I H N V N - D Q - Q M R N T N R Y V K Q F I M - I K T S S K - G T R I G M S S N S - C K L R P V A N E . . . . . . 5963 AAGATACATATGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAA K I H M K M W I Q D Q T I Q K P C N H K R Y I - K C G S R I K Q Y R S H A I T N E D T Y E N V D P G S N N T E A M Q S Q . . . . . . 5903 CCAAAAGATTACCTGTGATGACGGCATCAGATGTCTCCGCTTCAGACCTCCCAGGGAAAG P K D Y L - - R H Q M S P L Q T S Q G K Q K I T C D D G I R C L R F R P P R E S T K R L P V M T A S D V S A S D L P G K . . . . . . 5843 CATAACAATGGGCCCTATCACCGGTCTGCCCGTTGCCCCTACAATGTTGAGCTACAGAAG H N N G P Y H R S A R C P Y N V E L Q K I T M G P I T G L P V A P T M L S Y R S A - Q W A L S P V C P L P L Q C - A T E . . . . . . 5783 TTCCAGTTTGCCTGTCACCCCGGCCGTTTTGGTGACCACCATTACCTCGGCCACCACGTC F Q F A C H P G R F G D H H Y L G H H V S S L P V T P A V L V T T I T S A T T S V P V C L S P R P F W - P P L P R P P R . . . . . . 5723 CTCCAGAATAGCGACCTCTCCCATGACCACCTCTACCTCTGACTATTGGGGGTCTGTAAC L Q N S D L S H D H L Y L - L L G V C N S R I A T S P M T T S T S D Y W G S V T P P E - R P L P - P P L P L T I G G L - . . . . . . 5663 TCTGTTTTGGACAATACCTCTTAATATGTCCAGTCTCTCCACATCCATAACACTCTCTTG S V L D N T S - Y V Q S L H I H N T L L L F W T I P L N M S S L S T S I T L S - L C F G Q Y L L I C P V S P H P - H S L . . : . . . . 5603 ATTAAAGCATAGGTCTC : TCAGAGAAATGTTGACCGGTCTGCGGTGGACCCCCAGCTACAG I K A - V S : Q R N V D R S A V D P Q L Q L K H R S : L R E M L T G L R W T P S Y S D - S I G L : S E K C - P V C G G P P A T . . . . . . 5507 CTTGTAGTGAAGACTGAATAGGTCGGGCTGGATAACCTCCTGAACTCTGCCCTCTGGATT L V V K T E - V G L D N L L N S A L W I L - - R L N R S G W I T S - T L P S G L A C S E D - I G R A G - P P E L C P L D . . . . . . 5447 AAAAACCATTAAAATCACCTCCTTTATGAAACTTCTTAGATATTGATGCCATGGTGAAGT K N H - N H L L Y E T S - I L M P W - S K T I K I T S F M K L L R Y - C H G E V - K P L K S P P L - N F L D I D A M V K . . . . . . 5387 CGTCTGGCTTCACTCCCTCCACTTCTATTACAAAATCTACCACCTCCTGAAAGGATTTTG R L A S L P P L L L Q N L P P P E R I L V W L H S L H F Y Y K I Y H L L K G F C S S G F T P S T S I T K S T T S - K D F . . . . . . 5327 CTGCAGCAGCTACCTGTAAGGCTGAAATCCGCAAATCTGACCTCAACCCTTTCACGAAAC L Q Q L P V R L K S A N L T S T L S R N C S S Y L - G - N P Q I - P Q P F H E T A A A A T C K A E I R K S D L N P F T K . . . . . . 5267 GACGAATCCGCTCTTGTGGACTGAAGCAAAGCTGGGTGGCATACCTGGATAGTGCACAAA D E S A L V D - S K A G W H T W I V H K T N P L L W T E A K L G G I P G - C T K R R I R S C G L K Q S W V A Y L D S A Q . . . . . . 5207 ACTTAGCCTCATAAGCAGTAACCGACATCCTGCCTTGCTCTAAGCTCAGGAACTTATCTC T - P H K Q - P T S C L A L S S G T Y L L S L I S S N R H P A L L - A Q E L I S N L A S - A V T D I L P C S K L R N L S . . 5147 TCCTCCTATCCCTCAAAG S S Y P S K P P I P Q L L L S L K Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-3_AGS-2_PPS_1 (5950 5603) (frame '2'; 345 bp, 115 residues) 1 KCGSRIKQYR SHAITNQKIT CDDGIRCLRF RPPRESITMG PITGLPVAPT MLSYRSSSLP 61 VTPAVLVTTI TSATTSSRIA TSPMTTSTSD YWGSVTLFWT IPLNMSSLST SITLS- AGS-3 (6596 6121,5340 5170) SCR (e 0.889 d 0.000 a 0.000,e 0.895) Exon 1 6596 6121 ( 476 n); score: 0.889 Intron 1 6120 5341 ( 780 n); Pd: 0.000 Pa: 0.000 Exon 2 5340 5170 ( 171 n); score: 0.895 PGS (6596 6121,5340 5170) SGN-E353359+ 3-phase translation of AGS-3 (-strand): . . . . . . 6596 GAGCACCCCAAGGGGATGCACTTGGTCTAATAAAGCCTTTGCTTAACAACTCTTGAAGTT E H P K G M H L V - - S L C L T T L E V S T P R G C T W S N K A F A - Q L L K L A P Q G D A L G L I K P L L N N S - S . . . . . . 6536 GGGCCTTTAACTCTCTTAACTCAGCGGGAGCCATCCTATAATGGGGTATGGAAATGGGGC G P L T L L T Q R E P S Y N G V W K W G G L - L S - L S G S H P I M G Y G N G A W A F N S L N S A G A I L - W G M E M G . . . . . . 6476 GAGTACCCGGCTCCAGATCAATACAGAAATAAATATCTCTATTCGGTGGCATACGAGGAA E Y P A P D Q Y R N K Y L Y S V A Y E E S T R L Q I N T E I N I S I R W H T R K R V P G S R S I Q K - I S L F G G I R G . . . . . . 6416 GGTCTGCAGGAAACACATCTAGAAACTCACGGACTATCGAAATCGACTCAATTGAAGGTA G L Q E T H L E T H G L S K S T Q L K V V C R K H I - K L T D Y R N R L N - R Y R S A G N T S R N S R T I E I D S I E G . . . . . . 6356 CTTGGGTAGTATCATCCTAGAGGTGTGTCAAGAAAGCTAAACAACCCTTACTAACCATTC L G - Y H P R G V S R K L N N P Y - P F L G S I I L E V C Q E S - T T L T N H S T W V V S S - R C V K K A K Q P L L T I . . . . . . 6296 TCTTAGCACGAAGAAAGGAGATAATACGAAATGGAGTGGAAGTGTAGTCACCCTCCCACA S - H E E R R - Y E M E W K C S H P P T L S T K K G D N T K W S G S V V T L P H L L A R R K E I I R N G V E V - S P S H . . . . . . 6236 CTAACGGATCTGTCCCAGGCTTGGCCGACGTTACAGTTTTAGCATTACAATCTAAGATTG L T D L S Q A W P T L Q F - H Y N L R L - R I C P R L G R R Y S F S I T I - D C T N G S V P G L A D V T V L A L Q S K I . . . . . . : 6176 CAAAATTTGGAGACAGCCAAGTCATACCCAGAATTACATCGAAGTCAACCATTTCT : TGAA Q N L E T A K S Y P E L H R S Q P F L : E K I W R Q P S H T Q N Y I E V N H F : L K A K F G D S Q V I P R I T S K S T I S : - . . . . . . 5336 AGGATTTTGCTGCAGCAGCTACCTGTAAGGCTGAAATCCGCAAATCTGACCTCAACCCTT R I L L Q Q L P V R L K S A N L T S T L G F C C S S Y L - G - N P Q I - P Q P F K D F A A A A T C K A E I R K S D L N P . . . . . . 5276 TCACGAAACGACGAATCCGCTCTTGTGGACTGAAGCAAAGCTGGGTGGCATACCTGGATA S R N D E S A L V D - S K A G W H T W I H E T T N P L L W T E A K L G G I P G - F T K R R I R S C G L K Q S W V A Y L D . . . . . 5216 GTGCACAAAACTTAGCCTCATAAGCAGTAACCGACATCCTGCCTTGC V H K T - P H K Q - P T S C L C T K L S L I S S N R H P A L S A Q N L A S - A V T D I L P C Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-3_AGS-3_PPS_1 (6563 6348) (frame '1'; 213 bp, 71 residues) 1 SLCLTTLEVG PLTLLTQREP SYNGVWKWGE YPAPDQYRNK YLYSVAYEEG LQETHLETHG 61 LSKSTQLKVL G- AGS-4 (6041 6012,5976 5587,5550 5411) SCR (e 0.633 d 0.945 a 0.000,e 0.854 d 0.000 a 0.000,e 0.807) Exon 1 6041 6012 ( 30 n); score: 0.633 Intron 1 6011 5977 ( 35 n); Pd: 0.945 Pa: 0.000 Exon 2 5976 5587 ( 390 n); score: 0.854 Intron 2 5586 5551 ( 36 n); Pd: 0.000 Pa: 0.000 Exon 3 5550 5411 ( 140 n); score: 0.807 PGS (6041 6012,5976 5587,5550 5411) SGN-E577713+ 3-phase translation of AGS-4 (-strand): . . . : . . . 6041 ACTCACCCACCGGAGTAGAAACACGAATAG : GTAGCAAATGAGGAAGATACATATGAAAAT T H P P E - K H E - : V A N E E D T Y E N L T H R S R N T N R : - Q M R K I H M K M S P T G V E T R I : G S K - G R Y I - K . . . . . . 5946 GTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAAAAGATTACCTGTG V D P G S N N T E A M Q S Q T K R L P V W I Q D Q T I Q K P C N H K P K D Y L - C G S R I K Q Y R S H A I T N Q K I T C . . . . . . 5886 ATGACGGCATCAGATGTCTCCGCTTCAGACCTCCCAGGGAAAGCATAACAATGGGCCCTA M T A S D V S A S D L P G K A - Q W A L - R H Q M S P L Q T S Q G K H N N G P Y D D G I R C L R F R P P R E S I T M G P . . . . . . 5826 TCACCGGTCTGCCCGTTGCCCCTACAATGTTGAGCTACAGAAGTTCCAGTTTGCCTGTCA S P V C P L P L Q C - A T E V P V C L S H R S A R C P Y N V E L Q K F Q F A C H I T G L P V A P T M L S Y R S S S L P V . . . . . . 5766 CCCCGGCCGTTTTGGTGACCACCATTACCTCGGCCACCACGTCCTCCAGAATAGCGACCT P R P F W - P P L P R P P R P P E - R P P G R F G D H H Y L G H H V L Q N S D L T P A V L V T T I T S A T T S S R I A T . . . . . . 5706 CTCCCATGACCACCTCTACCTCTGACTATTGGGGGTCTGTAACTCTGTTTTGGACAATAC L P - P P L P L T I G G L - L C F G Q Y S H D H L Y L - L L G V C N S V L D N T S P M T T S T S D Y W G S V T L F W T I . . . . . . : 5646 CTCTTAATATGTCCAGTCTCTCCACATCCATAACACTCTCTTGATTAAAGCATAGGTCTC : L L I C P V S P H P - H S L D - S I G L : S - Y V Q S L H I H N T L L I K A - V S : P L N M S S L S T S I T L S - L K H R S : . . . . . . 5550 TCAGAGAAATGTTGACCGGTCTGCGGTGGACCCCCAGCTACAGCTTGTAGTGAAGACTGA S E K C - P V C G G P P A T A C S E D - Q R N V D R S A V D P Q L Q L V V K T E L R E M L T G L R W T P S Y S L - - R L . . . . . . 5490 ATAGGTCGGGCTGGATAACCTCCTGAACTCTGCCCTCTGGATTAAAAACCATTAAAATCA I G R A G - P P E L C P L D - K P L K S - V G L D N L L N S A L W I K N H - N H N R S G W I T S - T L P S G L K T I K I . . 5430 CCTCCTTTATGAAACTTCTT P P L - N F L L Y E T S T S F M K L L Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-3_AGS-4_PPS_1 (5950 5603) (frame '0'; 345 bp, 115 residues) 1 KCGSRIKQYR SHAITNQKIT CDDGIRCLRF RPPRESITMG PITGLPVAPT MLSYRSSSLP 61 VTPAVLVTTI TSATTSSRIA TSPMTTSTSD YWGSVTLFWT IPLNMSSLST SITLS- AGS-5 (8481 7450) SCR (e 0.940) Exon 1 8481 7450 (1032 n); score: 0.940 PGS (8034 7450) SGN-E352950+ PGS (8034 7450) SGN-E357100+ PGS (8034 7483) SGN-E352647+ PGS (8481 7940) SGN-E353207+ PGS (8451 8153) SGN-E578131+ 3-phase translation of AGS-5 (-strand): . . . . . . 8481 TCGGCATGCAATATTCTCCAAAATTTAGAAGTAAACTGCGTACCTCTATCTGATATAATG S A C N I L Q N L E V N C V P L S D I M R H A I F S K I - K - T A Y L Y L I - W G M Q Y S P K F R S K L R T S I - Y N . . . . . . 8421 GAAAGTGGAACTCCATGCAATCGAACAATTTCTGAGATGTAAAGTTTGGCTAACTTCTCT E S G T P C N R T I S E M - S L A N F S K V E L H A I E Q F L R C K V W L T S L G K W N S M Q S N N F - D V K F G - L L . . . . . . 8361 GCATTATAAGTCACCTTGACCGGAATGAAATGAGCAGACTTAGTTAATCTGTCAACAATT A L - V T L T G M K - A D L V N L S T I H Y K S P - P E - N E Q T - L I C Q Q L C I I S H L D R N E M S R L S - S V N N . . . . . . 8301 ACCCAAATGGAGTCATACTTACCCGTTGTCTTTGGAAGACTAACCACGAAGTCCATTGCA T Q M E S Y L P V V F G R L T T K S I A P K W S H T Y P L S L E D - P R S P L Q Y P N G V I L T R C L W K T N H E V H C . . . . . . 8241 ATTCTCTCCCACTTCCATTCAGGAATGGGCATTCTCTGAAGTGTCCCTCCAGGCCTCTGG I L S H F H S G M G I L - S V P P G L W F S P T S I Q E W A F S E V S L Q A S G N S L P L P F R N G H S L K C P S R P L . . . . . . 8181 TGTTCATACTTTACCTGCAGACAATTCGGGCATTGAGCAACAAAATTAACAATGTCACGC C S Y F T C R Q F G H - A T K L T M S R V H T L P A D N S G I E Q Q N - Q C H A V F I L Y L Q T I R A L S N K I N N V T . . . . . . 8121 TTCATCCTACTTCACCAAAAATGTTGCTTTAGATCACGATACATCTTGGTTGCACCAGGA F I L L H Q K C C F R S R Y I L V A P G S S Y F T K N V A L D H D T S W L H Q D L H P T S P K M L L - I T I H L G C T R . . . . . . 8061 TGTATAGAATACCTTGAACTATGAGCGTCTGTAAGAACAGTGTGAATCAAGTCATCGACG C I E Y L E L - A S V R T V - I K S S T V - N T L N Y E R L - E Q C E S S H R R M Y R I P - T M S V C K N S V N Q V I D . . . . . . 8001 CGGGGTACACGTACCCTTCCCTTAATCCTCAAAACACCTTCCTCATCGATTTTTGCTTCT R G T R T L P L I L K T P S S S I F A S G V H V P F P - S S K H L P H R F L L L A G Y T Y P S L N P Q N T F L I D F C F . . . . . . 7941 TTAACCTCTCCTCGCAACACCTTATCTCGGATCCAGATCAGTTTCTCATCGGTAAACTGC L T S P R N T L S R I Q I S F S S V N C - P L L A T P Y L G S R S V S H R - T A F N L S S Q H L I S D P D Q F L I G K L . . . . . . 7881 TTTCCTTTAATCTTATCAAGAAAGGAAGATCTTGCCTCCACACAGACCAAAAATCCTCCC F P L I L S R K E D L A S T Q T K N P P F L - S Y Q E R K I L P P H R P K I L P L S F N L I K K G R S C L H T D Q K S S . . . . . . 7821 TTCTCATTTACTTCTAGCCTCATAAGGTCATTATCCAGAGTCTGAACCTCTCTAGCCAAT F S F T S S L I R S L S R V - T S L A N S H L L L A S - G H Y P E S E P L - P M L L I Y F - P H K V I I Q S L N L S S Q . . . . . . 7761 GGGCGTCTAGAAACCTGCAAGTGGGCTAGACTTCCCATGTTCCCTGCCTTTCTACTTAAA G R L E T C K W A R L P M F P A F L L K G V - K P A S G L D F P C S L P F Y L K W A S R N L Q V G - T S H V P C L S T - . . . . . . 7701 ACATCTGCCACAACATTAGCTTTTTCCGGATGATACAAGATAGTGATATCATAGTCCTTC T S A T T L A F S G - Y K I V I S - S F H L P Q H - L F P D D T R - - Y H S P S N I C H N I S F F R M I Q D S D I I V L . . . . . . 7641 AGTAGTTCCATCCATCTCCTCTGTCTCAAATTCAAATCTTTCTGAGTAAAGATATACTGT S S S I H L L C L K F K S F - V K I Y C V V P S I S S V S N S N L S E - R Y T V Q - F H P S P L S Q I Q I F L S K D I L . . . . . . 7581 AAACTACGATGATCCGTATAGACTTCACACTTAACCCCATATAGATAATGTCTCCATTGC K L R - S V - T S H L T P Y R - C L H C N Y D D P Y R L H T - P H I D N V S I A - T T M I R I D F T L N P I - I M S P L . . . . . . 7521 TTTAATGCAAACACTACCGCAGCCAACTCCAAATCATGGGTTGGATAATTACGTTCATGC F N A N T T A A N S K S W V G - L R S C L M Q T L P Q P T P N H G L D N Y V H A L - C K H Y R S Q L Q I M G W I I T F M . . 7461 ACCTTTAATTGC T F N C P L I H L - L Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-3_AGS-5_PPS_2 (8044 7805) (frame '0'; 237 bp, 79 residues) 1 TMSVCKNSVN QVIDAGYTYP SLNPQNTFLI DFCFFNLSSQ HLISDPDQFL IGKLLSFNLI 61 KKGRSCLHTD QKSSLLIYF- >C08HBa0294K15.1-_PGL-3_AGS-5_PPS_1 (8016 7777) (frame '1'; 237 bp, 79 residues) 1 IKSSTRGTRT LPLILKTPSS SIFASLTSPR NTLSRIQISF SSVNCFPLIL SRKEDLASTQ 61 TKNPPFSFTS SLIRSLSRV- >C08HBa0294K15.1-_PGL-3_AGS-5_PPS_3 (8314 8090) (frame '0'; 222 bp, 74 residues) 1 SVNNYPNGVI LTRCLWKTNH EVHCNSLPLP FRNGHSLKCP SRPLVFILYL QTIRALSNKI 61 NNVTLHPTSP KMLL- 3-phase translation of AGS-5 (+strand): . . . . . . 7450 GCAATTAAAGGTGCATGAACGTAATTATCCAACCCATGATTTGGAGTTGGCTGCGGTAGT A I K G A - T - L S N P - F G V G C G S Q L K V H E R N Y P T H D L E L A A V V N - R C M N V I I Q P M I W S W L R - . . . . . . 7510 GTTTGCATTAAAGCAATGGAGACATTATCTATATGGGGTTAAGTGTGAAGTCTATACGGA V C I K A M E T L S I W G - V - S L Y G F A L K Q W R H Y L Y G V K C E V Y T D C L H - S N G D I I Y M G L S V K S I R . . . . . . 7570 TCATCGTAGTTTACAGTATATCTTTACTCAGAAAGATTTGAATTTGAGACAGAGGAGATG S S - F T V Y L Y S E R F E F E T E E M H R S L Q Y I F T Q K D L N L R Q R R W I I V V Y S I S L L R K I - I - D R G D . . . . . . 7630 GATGGAACTACTGAAGGACTATGATATCACTATCTTGTATCATCCGGAAAAAGCTAATGT D G T T E G L - Y H Y L V S S G K S - C M E L L K D Y D I T I L Y H P E K A N V G W N Y - R T M I S L S C I I R K K L M . . . . . . 7690 TGTGGCAGATGTTTTAAGTAGAAAGGCAGGGAACATGGGAAGTCTAGCCCACTTGCAGGT C G R C F K - K G R E H G K S S P L A G V A D V L S R K A G N M G S L A H L Q V L W Q M F - V E R Q G T W E V - P T C R . . . . . . 7750 TTCTAGACGCCCATTGGCTAGAGAGGTTCAGACTCTGGATAATGACCTTATGAGGCTAGA F - T P I G - R G S D S G - - P Y E A R S R R P L A R E V Q T L D N D L M R L E F L D A H W L E R F R L W I M T L - G - . . . . . . 7810 AGTAAATGAGAAGGGAGGATTTTTGGTCTGTGTGGAGGCAAGATCTTCCTTTCTTGATAA S K - E G R I F G L C G G K I F L S - - V N E K G G F L V C V E A R S S F L D K K - M R R E D F W S V W R Q D L P F L I . . . . . . 7870 GATTAAAGGAAAGCAGTTTACCGATGAGAAACTGATCTGGATCCGAGATAAGGTGTTGCG D - R K A V Y R - E T D L D P R - G V A I K G K Q F T D E K L I W I R D K V L R R L K E S S L P M R N - S G S E I R C C . . . . . . 7930 AGGAGAGGTTAAAGAAGCAAAAATCGATGAGGAAGGTGTTTTGAGGATTAAGGGAAGGGT R R G - R S K N R - G R C F E D - G K G G E V K E A K I D E E G V L R I K G R V E E R L K K Q K S M R K V F - G L R E G . . . . . . 7990 ACGTGTACCCCGCGTCGATGACTTGATTCACACTGTTCTTACAGACGCTCATAGTTCAAG T C T P R R - L D S H C S Y R R S - F K R V P R V D D L I H T V L T D A H S S R Y V Y P A S M T - F T L F L Q T L I V Q . . . . . . 8050 GTATTCTATACATCCTGGTGCAACCAAGATGTATCGTGATCTAAAGCAACATTTTTGGTG V F Y T S W C N Q D V S - S K A T F L V Y S I H P G A T K M Y R D L K Q H F W - G I L Y I L V Q P R C I V I - S N I F G . . . . . . 8110 AAGTAGGATGAAGCGTGACATTGTTAATTTTGTTGCTCAATGCCCGAATTGTCTGCAGGT K - D E A - H C - F C C S M P E L S A G S R M K R D I V N F V A Q C P N C L Q V E V G - S V T L L I L L L N A R I V C R . . . . . . 8170 AAAGTATGAACACCAGAGGCCTGGAGGGACACTTCAGAGAATGCCCATTCCTGAATGGAA K V - T P E A W R D T S E N A H S - M E K Y E H Q R P G G T L Q R M P I P E W K - S M N T R G L E G H F R E C P F L N G . . . . . . 8230 GTGGGAGAGAATTGCAATGGACTTCGTGGTTAGTCTTCCAAAGACAACGGGTAAGTATGA V G E N C N G L R G - S S K D N G - V - W E R I A M D F V V S L P K T T G K Y D S G R E L Q W T S W L V F Q R Q R V S M . . . . . . 8290 CTCCATTTGGGTAATTGTTGACAGATTAACTAAGTCTGCTCATTTCATTCCGGTCAAGGT L H L G N C - Q I N - V C S F H S G Q G S I W V I V D R L T K S A H F I P V K V T P F G - L L T D - L S L L I S F R S R . . . . . . 8350 GACTTATAATGCAGAGAAGTTAGCCAAACTTTACATCTCAGAAATTGTTCGATTGCATGG D L - C R E V S Q T L H L R N C S I A W T Y N A E K L A K L Y I S E I V R L H G - L I M Q R S - P N F T S Q K L F D C M . . . . . . 8410 AGTTCCACTTTCCATTATATCAGATAGAGGTACGCAGTTTACTTCTAAATTTTGGAGAAT S S T F H Y I R - R Y A V Y F - I L E N V P L S I I S D R G T Q F T S K F W R I E F H F P L Y Q I E V R S L L L N F G E . . 8470 ATTGCATGCCGA I A C R L H A Y C M P Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-3_AGS-5_PPS_1 (7451 8110) (frame '2'; 657 bp, 219 residues) 1 QLKVHERNYP THDLELAAVV FALKQWRHYL YGVKCEVYTD HRSLQYIFTQ KDLNLRQRRW 61 MELLKDYDIT ILYHPEKANV VADVLSRKAG NMGSLAHLQV SRRPLAREVQ TLDNDLMRLE 121 VNEKGGFLVC VEARSSFLDK IKGKQFTDEK LIWIRDKVLR GEVKEAKIDE EGVLRIKGRV 181 RVPRVDDLIH TVLTDAHSSR YSIHPGATKM YRDLKQHFW- >C08HBa0294K15.1+_PGL-3_AGS-5_PPS_2 (8111 8479) (frame '2'; 369 bp, 123 residues) 1 SRMKRDIVNF VAQCPNCLQV KYEHQRPGGT LQRMPIPEWK WERIAMDFVV SLPKTTGKYD 61 SIWVIVDRLT KSAHFIPVKV TYNAEKLAKL YISEIVRLHG VPLSIISDRG TQFTSKFWRI 121 LHA AGS-6 (9776 8764) SCR (e 0.832) Exon 1 9776 8764 (1013 n); score: 0.832 PGS (9436 8764) SGN-E354383- PGS (9581 9097) SGN-E252199- PGS (9776 9423) SGN-E242274- 3-phase translation of AGS-6 (-strand): . . . . . . 9776 TTATTCCAAGGTTGTCTCCTTTAACCCCCAAGAAATTGAATTATTAACATTAAACCACTA L F Q G C L L - P P R N - I I N I K P L Y S K V V S F N P Q E I E L L T L N H - I P R L S P L T P K K L N Y - H - T T . . . . . . 9716 ACTTTATAATCATAAGCAGGAATAATCCAAAACACCCCTTAAAAACTTTTAACAGAAATC T L - S - A G I I Q N T P - K L L T E I L Y N H K Q E - S K T P L K N F - Q K S N F I I I S R N N P K H P L K T F N R N . . . . . . 9656 CGACCCAGTCAGGGTTACGCAGTCTGTGACGGTCCTTCGTGCCTGCGACGGTCGTCCTGC R P S Q G Y A V C D G P S C L R R S S C D P V R V T Q S V T V L R A C D G R P A P T Q S G L R S L - R S F V P A T V V L . . . . . . 9596 TAAGTCGTCACAGAGTTTAGAGACTCAATTTTTATTTAAGACCATGTGACGGTCCGTCGT - V V T E F R D S I F I - D H V T V R R K S S Q S L E T Q F L F K T M - R S V V L S R H R V - R L N F Y L R P C D G P S . . . . . . 9536 GCCTACGACGGTCCGTCCTGCTCTTCCATTGCGAAGTTCAGAGAGTTGTTCTCAGTACCC A Y D G P S C S S I A K F R E L F S V P P T T V R P A L P L R S S E S C S Q Y P C L R R S V L L F H C E V Q R V V L S T . . . . . . 9476 AATTTTTCAGAAACTAAGTGTTTTGGAACGAGACCCCCTCGACGGTCCGTCGTGGTATCC N F S E T K C F G T R P P R R S V V V S I F Q K L S V L E R D P L D G P S W Y P Q F F R N - V F W N E T P S T V R R G I . . . . . . 9416 ATCGACCCAGACAGTTATTAACAGAAATAAACTCTACTGCTCAAAACGACTAACAGGTCG I D P D S Y - Q K - T L L L K T T N R S S T Q T V I N R N K L Y C S K R L T G R H R P R Q L L T E I N S T A Q N D - Q V . . . . . . 9356 TTACAATAGACACCAATTTACCCATCGTTCGTCCTTGAACGATCACAAGAAGAAAAACAA L Q - T P I Y P S F V L E R S Q E E K Q Y N R H Q F T H R S S L N D H K K K N K V T I D T N L P I V R P - T I T R R K T . . . . . . 9296 GGGCGAAAAGGAGTACCTGAATCTGTAAACAGGTGTGGGTATTTTTCTTGCATATCAGCC G R K G V P E S V N R C G Y F S C I S A G E K E Y L N L - T G V G I F L A Y Q P R A K R S T - I C K Q V W V F F L H I S . . . . . . 9236 TCCTTCTCCCAAGTGGACTCTTCAATTGGTCGATTCTTTCATTGAACCTTGATGGATGCA S F S Q V D S S I G R F F H - T L M D A P S P K W T L Q L V D S F I E P - W M Q L L L P S G L F N W S I L S L N L D G C . . . . . . 9176 ATCTCCCTTGACCTCAGCTTGCGTACTTCTCTATCTAAGATAGCAACAGGCTCCTCCTCA I S L D L S L R T S L S K I A T G S S S S P L T S A C V L L Y L R - Q Q A P P H N L P - P Q L A Y F S I - D S N R L L L . . . . . . 9116 TAAGACAAATTCTCATCAAGAAGAACTGAATCCCAACGAATGATGTAGTTTCCATCCCCA - D K F S S R R T E S Q R M M - F P S P K T N S H Q E E L N P N E - C S F H P H I R Q I L I K K N - I P T N D V V S I P . . . . . . 9056 TGGTATCTTTTCAACATAGACACATGAAATACCGGGTGCAATCCTGACAGTCCTGGGGGC W Y L F N I D T - N T G C N P D S P G G G I F S T - T H E I P G A I L T V L G A M V S F Q H R H M K Y R V Q S - Q S W G . . . . . . 8996 AAGGCTAATTCATACGCTACCTCCCCCACGCGCTTCAGAACTTCAAATGGACCAATATAC K A N S Y A T S P T R F R T S N G P I Y R L I H T L P P P R A S E L Q M D Q Y T Q G - F I R Y L P H A L Q N F K W T N I . . . . . . 8936 CTCGGACTAAGCTTACCAAACCGCATCACCCCTTTCATGGGTGAAACCTTCAGCAAAACT L G L S L P N R I T P F M G E T F S K T S D - A Y Q T A S P L S W V K P S A K L P R T K L T K P H H P F H G - N L Q Q N . . . . . . 8876 TGCTCACCCTCCATAAACTCCAAGTCTCTAACCTTTCGATCTGCATATTCTTTTTGTCTA C S P S I N S K S L T F R S A Y S F C L A H P P - T P S L - P F D L H I L F V Y L L T L H K L Q V S N L S I C I F F L S . . . . . . 8816 CTTTGAGCCGCTAAAAGCTTTTCTTGAATGCATTTCACTTTATCTAGCGATTC L - A A K S F S - M H F T L S S D F E P L K A F L E C I S L Y L A I T L S R - K L F L N A F H F I - R F Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-3_AGS-6_PPS_1 (9547 9269) (frame '2'; 276 bp, 92 residues) 1 RSVVPTTVRP ALPLRSSESC SQYPIFQKLS VLERDPLDGP SWYPSTQTVI NRNKLYCSKR 61 LTGRYNRHQF THRSSLNDHK KKNKGEKEYL NL- >C08HBa0294K15.1-_PGL-3_AGS-6_PPS_2 (9029 8811) (frame '1'; 216 bp, 72 residues) 1 NTGCNPDSPG GKANSYATSP TRFRTSNGPI YLGLSLPNRI TPFMGETFSK TCSPSINSKS 61 LTFRSAYSFC LL- 3-phase translation of AGS-6 (+strand): . . . . . . 8764 GAATCGCTAGATAAAGTGAAATGCATTCAAGAAAAGCTTTTAGCGGCTCAAAGTAGACAA E S L D K V K C I Q E K L L A A Q S R Q N R - I K - N A F K K S F - R L K V D K I A R - S E M H S R K A F S G S K - T . . . . . . 8824 AAAGAATATGCAGATCGAAAGGTTAGAGACTTGGAGTTTATGGAGGGTGAGCAAGTTTTG K E Y A D R K V R D L E F M E G E Q V L K N M Q I E R L E T W S L W R V S K F C K R I C R S K G - R L G V Y G G - A S F . . . . . . 8884 CTGAAGGTTTCACCCATGAAAGGGGTGATGCGGTTTGGTAAGCTTAGTCCGAGGTATATT L K V S P M K G V M R F G K L S P R Y I - R F H P - K G - C G L V S L V R G I L A E G F T H E R G D A V W - A - S E V Y . . . . . . 8944 GGTCCATTTGAAGTTCTGAAGCGCGTGGGGGAGGTAGCGTATGAATTAGCCTTGCCCCCA G P F E V L K R V G E V A Y E L A L P P V H L K F - S A W G R - R M N - P C P Q W S I - S S E A R G G G S V - I S L A P . . . . . . 9004 GGACTGTCAGGATTGCACCCGGTATTTCATGTGTCTATGTTGAAAAGATACCATGGGGAT G L S G L H P V F H V S M L K R Y H G D D C Q D C T R Y F M C L C - K D T M G M R T V R I A P G I S C V Y V E K I P W G . . . . . . 9064 GGAAACTACATCATTCGTTGGGATTCAGTTCTTCTTGATGAGAATTTGTCTTATGAGGAG G N Y I I R W D S V L L D E N L S Y E E E T T S F V G I Q F F L M R I C L M R R W K L H H S L G F S S S - - E F V L - G . . . . . . 9124 GAGCCTGTTGCTATCTTAGATAGAGAAGTACGCAAGCTGAGGTCAAGGGAGATTGCATCC E P V A I L D R E V R K L R S R E I A S S L L L S - I E K Y A S - G Q G R L H P G A C C Y L R - R S T Q A E V K G D C I . . . . . . 9184 ATCAAGGTTCAATGAAAGAATCGACCAATTGAAGAGTCCACTTGGGAGAAGGAGGCTGAT I K V Q - K N R P I E E S T W E K E A D S R F N E R I D Q L K S P L G R R R L I H Q G S M K E S T N - R V H L G E G G - . . . . . . 9244 ATGCAAGAAAAATACCCACACCTGTTTACAGATTCAGGTACTCCTTTTCGCCCTTGTTTT M Q E K Y P H L F T D S G T P F R P C F C K K N T H T C L Q I Q V L L F A L V F Y A R K I P T P V Y R F R Y S F S P L F . . . . . . 9304 TCTTCTTGTGATCGTTCAAGGACGAACGATGGGTAAATTGGTGTCTATTGTAACGACCTG S S C D R S R T N D G - I G V Y C N D L L L V I V Q G R T M G K L V S I V T T C F F L - S F K D E R W V N W C L L - R P . . . . . . 9364 TTAGTCGTTTTGAGCAGTAGAGTTTATTTCTGTTAATAACTGTCTGGGTCGATGGATACC L V V L S S R V Y F C - - L S G S M D T - S F - A V E F I S V N N C L G R W I P V S R F E Q - S L F L L I T V W V D G Y . . . . . . 9424 ACGACGGACCGTCGAGGGGGTCTCGTTCCAAAACACTTAGTTTCTGAAAAATTGGGTACT T T D R R G G L V P K H L V S E K L G T R R T V E G V S F Q N T - F L K N W V L H D G P S R G S R S K T L S F - K I G Y . . . . . . 9484 GAGAACAACTCTCTGAACTTCGCAATGGAAGAGCAGGACGGACCGTCGTAGGCACGACGG E N N S L N F A M E E Q D G P S - A R R R T T L - T S Q W K S R T D R R R H D G - E Q L S E L R N G R A G R T V V G T T . . . . . . 9544 ACCGTCACATGGTCTTAAATAAAAATTGAGTCTCTAAACTCTGTGACGACTTAGCAGGAC T V T W S - I K I E S L N S V T T - Q D P S H G L K - K L S L - T L - R L S R T D R H M V L N K N - V S K L C D D L A G . . . . . . 9604 GACCGTCGCAGGCACGAAGGACCGTCACAGACTGCGTAACCCTGACTGGGTCGGATTTCT D R R R H E G P S Q T A - P - L G R I S T V A G T K D R H R L R N P D W V G F L R P S Q A R R T V T D C V T L T G S D F . . . . . . 9664 GTTAAAAGTTTTTAAGGGGTGTTTTGGATTATTCCTGCTTATGATTATAAAGTTAGTGGT V K S F - G V F W I I P A Y D Y K V S G L K V F K G C F G L F L L M I I K L V V C - K F L R G V L D Y S C L - L - S - W . . . . . . 9724 TTAATGTTAATAATTCAATTTCTTGGGGGTTAAAGGAGACAACCTTGGAATAA L M L I I Q F L G G - R R Q P W N - C - - F N F L G V K G D N L G I F N V N N S I S W G L K E T T L E - Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-3_AGS-6_PPS_1 (8764 9198) (frame '1'; 432 bp, 144 residues) 1 ESLDKVKCIQ EKLLAAQSRQ KEYADRKVRD LEFMEGEQVL LKVSPMKGVM RFGKLSPRYI 61 GPFEVLKRVG EVAYELALPP GLSGLHPVFH VSMLKRYHGD GNYIIRWDSV LLDENLSYEE 121 EPVAILDREV RKLRSREIAS IKVQ- AGS-7 (11131 9947) SCR (e 0.739) Exon 1 11131 9947 (1185 n); score: 0.739 PGS (10438 9947) SGN-E347579- PGS (10624 10132) SGN-E242359- PGS (10817 10417) SGN-E246710- PGS (10791 10567) SGN-E353206- PGS (11131 10642) SGN-E356696- PGS (11131 10642) SGN-E356206- PGS (10955 10735) SGN-E546219+ PGS (11130 10741) SGN-E370357+ PGS (10987 10741) SGN-E373117- PGS (10987 10741) SGN-E373116+ PGS (10987 10771) SGN-E298638- PGS (10965 10806) SGN-E238551- PGS (10955 10806) SGN-E352844- 3-phase translation of AGS-7 (-strand): . . . . . . 11131 TTGTCACGACCCAAAACGAGCCGTGAGTGGCACCCACACTTACCCTCCTATGTGAGAGAA L S R P K T S R E W H P H L P S Y V R E C H D P K R A V S G T H T Y P P M - E N V T T Q N E P - V A P T L T L L C E R . . . . . . 11071 CCAACCAATCTAAACCCCAACATTTCAACAATATTAAACAGAATATAATGCGGAAAACTT P T N L N P N I S T I L N R I - C G K L Q P I - T P T F Q Q Y - T E Y N A E N L T N Q S K P Q H F N N I K Q N I M R K T . . . . . . 11011 AAAACTCATTAACGAAATCAATAATTAACTTCTAAAACTCAGAACTTATCATTATCCCCA K T H - R N Q - L T S K T Q N L S L S P K L I N E I N N - L L K L R T Y H Y P Q - N S L T K S I I N F - N S E L I I I P . . . . . . 10951 AAATCTGGAAGTCATCATCACAAGAACATCTATCCTCAAATTACTAAATCTAAGAGTATC K S G S H H H K N I Y P Q I T K S K S I N L E V I I T R T S I L K L L N L R V S K I W K S S S Q E H L S S N Y - I - E Y . . . . . . 10891 TAAGAAGCTAAAATAAATAAAAGAGATGGTCCATGTCCGAACTTCAAGACATCAAGACCT - E A K I N K R D G P C P N F K T S R P K K L K - I K E M V H V R T S R H Q D L L R S - N K - K R W S M S E L Q D I K T . . . . . . 10831 GAAAGAAAGAATCCAGTCCGAGCTAGGAACAATAGCTCACCCTGAAATCTGATTATGCTG E R K N P V R A R N N S S P - N L I M L K E R I Q S E L G T I A H P E I - L C - - K K E S S P S - E Q - L T L K S D Y A . . . . . . 10771 AAGTCTGGCTAGAGTTGTGGTTGAGTCGAAGTTGTTGGCACGTTTGTTGCACTCCACAAA K S G - S C G - V E V V G T F V A L H K S L A R V V V E S K L L A R L L H S T N E V W L E L W L S R S C W H V C C T P Q . . . . . . 10711 TAACAAAGAAAGAAACATACAAGTAGGGGTCAGTACAAGGCACAAGTACTGAGTAGGTAT - Q R K K H T S R G Q Y K A Q V L S R Y N K E R N I Q V G V S T R H K Y - V G I I T K K E T Y K - G S V Q G T S T E - V . . . . . . 10651 CATCGGCCAACTCAAAATAGAAAACAATATACATCAGATAATAACATAAAATCAACTACA H R P T Q N R K Q Y T S D N N I K S T T I G Q L K I E N N I H Q I I T - N Q L Q S S A N S K - K T I Y I R - - H K I N Y . . . . . . 10591 ATACTCAACAGGTGACAACAACAAGTACCATAACCATTGGGCACAACCCAAGCACATCTA I L N R - Q Q Q V P - P L G T T Q A H L Y S T G D N N K Y H N H W A Q P K H I Y N T Q Q V T T T S T I T I G H N P S T S . . . . . . 10531 TGAGGACTCAAGCCTCCACACCATACTCATTTGGGAAACAGGTTCATTAAATTTGAGTAT - G L K P P H H T H L G N R F I K F E Y E D S S L H T I L I W E T G S L N L S I M R T Q A S T P Y S F G K Q V H - I - V . . . . . . 10471 ATTAGCATAATTCAAGATTCATTCTTTTTACTATCCTGGTGTCAAAACGTGACACCCGAT I S I I Q D S F F L L S W C Q N V T P D L A - F K I H S F Y Y P G V K T - H P I Y - H N S R F I L F T I L V S K R D T R . . . . . . 10411 CCATACTATCCTGGTGTCGGAACGTGACACTCTGATCCTCTACTATCCTGGTGTCGGAAC P Y Y P G V G T - H S D P L L S W C R N H T I L V S E R D T L I L Y Y P G V G T S I L S W C R N V T L - S S T I L V S E . . . . . . 10351 GTGATACTCGATCCATACTATCCTGGTGTCGAACGTGACACCCGATCCATACTATCCTGG V I L D P Y Y P G V E R D T R S I L S W - Y S I H T I L V S N V T P D P Y Y P G R D T R S I L S W C R T - H P I H T I L . . . . . . 10291 TGTCGGAACGTGACACCCGATCCATACTATCCTGGTGTCGGAACGTGACACCCGATCCAT C R N V T P D P Y Y P G V G T - H P I H V G T - H P I H T I L V S E R D T R S I V S E R D T R S I L S W C R N V T P D P . . . . . . 10231 ACTATCCTGGTGTCGGAATGTGACACTCCGATCCCCTAATTCTCATTCTTTCAGTTCATC T I L V S E C D T P I P - F S F F Q F I L S W C R N V T L R S P N S H S F S S S Y Y P G V G M - H S D P L I L I L S V H . . . . . . 10171 AAGCCTTCTTTTATACCAAGGTATCATCATTAACAAAGAGGTTTTAAGGTTTAAGATTCA K P S F I P R Y H H - Q R G F K V - D S S L L L Y Q G I I I N K E V L R F K I Q Q A F F Y T K V S S L T K R F - G L R F . . . . . . 10111 ACAGCCTCATCATGCTTATTTTATCACAATTATATAATCACGTCATGCAAGCACACAATT T A S S C L F Y H N Y I I T S C K H T I Q P H H A Y F I T I I - S R H A S T Q L N S L I M L I L S Q L Y N H V M Q A H N . . . . . . 10051 AAGCATATAGAAGACTTTACAATACTACCCAACACATATCATTCGCTATTAAGAGTTTAC K H I E D F T I L P N T Y H S L L R V Y S I - K T L Q Y Y P T H I I R Y - E F T - A Y R R L Y N T T Q H I S F A I K S L . . . . . 9991 TATAGCATAATCCATAACCTACCTCCACCGAAGAATTCGTGATCA Y S I I H N L P P P K N S - S I A - S I T Y L H R R I R D L - H N P - P T S T E E F V I Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-3_AGS-7_PPS_1 (10278 10075) (frame '2'; 201 bp, 67 residues) 1 HPIHTILVSE RDTRSILSWC RNVTLRSPNS HSFSSSSLLL YQGIIINKEV LRFKIQQPHH 61 AYFITII- 3-phase translation of AGS-7 (+strand): . . . . . . 9947 TGATCACGAATTCTTCGGTGGAGGTAGGTTATGGATTATGCTATAGTAAACTCTTAATAG - S R I L R W R - V M D Y A I V N S - - D H E F F G G G R L W I M L - - T L N S I T N S S V E V G Y G L C Y S K L L I . . . . . . 10007 CGAATGATATGTGTTGGGTAGTATTGTAAAGTCTTCTATATGCTTAATTGTGTGCTTGCA R M I C V G - Y C K V F Y M L N C V L A E - Y V L G S I V K S S I C L I V C L H A N D M C W V V L - S L L Y A - L C A C . . . . . . 10067 TGACGTGATTATATAATTGTGATAAAATAAGCATGATGAGGCTGTTGAATCTTAAACCTT - R D Y I I V I K - A - - G C - I L N L D V I I - L - - N K H D E A V E S - T L M T - L Y N C D K I S M M R L L N L K P . . . . . . 10127 AAAACCTCTTTGTTAATGATGATACCTTGGTATAAAAGAAGGCTTGATGAACTGAAAGAA K T S L L M M I P W Y K R R L D E L K E K P L C - - - Y L G I K E G L M N - K N - N L F V N D D T L V - K K A - - T E R . . . . . . 10187 TGAGAATTAGGGGATCGGAGTGTCACATTCCGACACCAGGATAGTATGGATCGGGTGTCA - E L G D R S V T F R H Q D S M D R V S E N - G I G V S H S D T R I V W I G C H M R I R G S E C H I P T P G - Y G S G V . . . . . . 10247 CGTTCCGACACCAGGATAGTATGGATCGGGTGTCACGTTCCGACACCAGGATAGTATGGA R S D T R I V W I G C H V P T P G - Y G V P T P G - Y G S G V T F R H Q D S M D T F R H Q D S M D R V S R S D T R I V W . . . . . . 10307 TCGGGTGTCACGTTCGACACCAGGATAGTATGGATCGAGTATCACGTTCCGACACCAGGA S G V T F D T R I V W I E Y H V P T P G R V S R S T P G - Y G S S I T F R H Q D I G C H V R H Q D S M D R V S R S D T R . . . . . . 10367 TAGTAGAGGATCAGAGTGTCACGTTCCGACACCAGGATAGTATGGATCGGGTGTCACGTT - - R I R V S R S D T R I V W I G C H V S R G S E C H V P T P G - Y G S G V T F I V E D Q S V T F R H Q D S M D R V S R . . . . . . 10427 TTGACACCAGGATAGTAAAAAGAATGAATCTTGAATTATGCTAATATACTCAAATTTAAT L T P G - - K E - I L N Y A N I L K F N - H Q D S K K N E S - I M L I Y S N L M F D T R I V K R M N L E L C - Y T Q I - . . . . . . 10487 GAACCTGTTTCCCAAATGAGTATGGTGTGGAGGCTTGAGTCCTCATAGATGTGCTTGGGT E P V S Q M S M V W R L E S S - M C L G N L F P K - V W C G G L S P H R C A W V - T C F P N E Y G V E A - V L I D V L G . . . . . . 10547 TGTGCCCAATGGTTATGGTACTTGTTGTTGTCACCTGTTGAGTATTGTAGTTGATTTTAT C A Q W L W Y L L L S P V E Y C S - F Y V P N G Y G T C C C H L L S I V V D F M L C P M V M V L V V V T C - V L - L I L . . . . . . 10607 GTTATTATCTGATGTATATTGTTTTCTATTTTGAGTTGGCCGATGATACCTACTCAGTAC V I I - C I L F S I L S W P M I P T Q Y L L S D V Y C F L F - V G R - Y L L S T C Y Y L M Y I V F Y F E L A D D T Y S V . . . . . . 10667 TTGTGCCTTGTACTGACCCCTACTTGTATGTTTCTTTCTTTGTTATTTGTGGAGTGCAAC L C L V L T P T C M F L S L L F V E C N C A L Y - P L L V C F F L C Y L W S A T L V P C T D P Y L Y V S F F V I C G V Q . . . . . . 10727 AAACGTGCCAACAACTTCGACTCAACCACAACTCTAGCCAGACTTCAGCATAATCAGATT K R A N N F D S T T T L A R L Q H N Q I N V P T T S T Q P Q L - P D F S I I R F Q T C Q Q L R L N H N S S Q T S A - S D . . . . . . 10787 TCAGGGTGAGCTATTGTTCCTAGCTCGGACTGGATTCTTTCTTTCAGGTCTTGATGTCTT S G - A I V P S S D W I L S F R S - C L Q G E L L F L A R T G F F L S G L D V L F R V S Y C S - L G L D S F F Q V L M S . . . . . . 10847 GAAGTTCGGACATGGACCATCTCTTTTATTTATTTTAGCTTCTTAGATACTCTTAGATTT E V R T W T I S F I Y F S F L D T L R F K F G H G P S L L F I L A S - I L L D L - S S D M D H L F Y L F - L L R Y S - I . . . . . . 10907 AGTAATTTGAGGATAGATGTTCTTGTGATGATGACTTCCAGATTTTGGGGATAATGATAA S N L R I D V L V M M T S R F W G - - - V I - G - M F L - - - L P D F G D N D K - - F E D R C S C D D D F Q I L G I M I . . . . . . 10967 GTTCTGAGTTTTAGAAGTTAATTATTGATTTCGTTAATGAGTTTTAAGTTTTCCGCATTA V L S F R S - L L I S L M S F K F S A L F - V L E V N Y - F R - - V L S F P H Y S S E F - K L I I D F V N E F - V F R I . . . . . . 11027 TATTCTGTTTAATATTGTTGAAATGTTGGGGTTTAGATTGGTTGGTTCTCTCACATAGGA Y S V - Y C - N V G V - I G W F S H I G I L F N I V E M L G F R L V G S L T - E I F C L I L L K C W G L D W L V L S H R . . . . . 11087 GGGTAAGTGTGGGTGCCACTCACGGCTCGTTTTGGGTCGTGACAA G - V W V P L T A R F G S - Q G K C G C H S R L V L G R D R V S V G A T H G S F W V V T Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-3_AGS-7_PPS_1 (10231 10470) (frame '0'; 237 bp, 79 residues) 1 YGSGVTFRHQ DSMDRVSRSD TRIVWIGCHV RHQDSMDRVS RSDTRIVEDQ SVTFRHQDSM 61 DRVSRFDTRI VKRMNLELC- AGS-8 (10859 10434,10398 10136) SCR (e 0.886 d 0.000 a 0.000,e 0.751) Exon 1 10859 10434 ( 426 n); score: 0.886 Intron 1 10433 10399 ( 35 n); Pd: 0.000 Pa: 0.000 Exon 2 10398 10136 ( 263 n); score: 0.751 PGS (10859 10434,10398 10136) SGN-E241789+ 3-phase translation of AGS-8 (-strand): . . . . . . 10859 ATGTCCGAACTTCAAGACATCAAGACCTGAAAGAAAGAATCCAGTCCGAGCTAGGAACAA M S E L Q D I K T - K K E S S P S - E Q C P N F K T S R P E R K N P V R A R N N V R T S R H Q D L K E R I Q S E L G T . . . . . . 10799 TAGCTCACCCTGAAATCTGATTATGCTGAAGTCTGGCTAGAGTTGTGGTTGAGTCGAAGT - L T L K S D Y A E V W L E L W L S R S S S P - N L I M L K S G - S C G - V E V I A H P E I - L C - S L A R V V V E S K . . . . . . 10739 TGTTGGCACGTTTGTTGCACTCCACAAATAACAAAGAAAGAAACATACAAGTAGGGGTCA C W H V C C T P Q I T K K E T Y K - G S V G T F V A L H K - Q R K K H T S R G Q L L A R L L H S T N N K E R N I Q V G V . . . . . . 10679 GTACAAGGCACAAGTACTGAGTAGGTATCATCGGCCAACTCAAAATAGAAAACAATATAC V Q G T S T E - V S S A N S K - K T I Y Y K A Q V L S R Y H R P T Q N R K Q Y T S T R H K Y - V G I I G Q L K I E N N I . . . . . . 10619 ATCAGATAATAACATAAAATCAACTACAATACTCAACAGGTGACAACAACAAGTACCATA I R - - H K I N Y N T Q Q V T T T S T I S D N N I K S T T I L N R - Q Q Q V P - H Q I I T - N Q L Q Y S T G D N N K Y H . . . . . . 10559 ACCATTGGGCACAACCCAAGCACATCTATGAGGACTCAAGCCTCCACACCATACTCATTT T I G H N P S T S M R T Q A S T P Y S F P L G T T Q A H L - G L K P P H H T H L N H W A Q P K H I Y E D S S L H T I L I . . . . . . 10499 GGGAAACAGGTTCATTAAATTTGAGTATATTAGCATAATTCAAGATTCATTCTTTTTACT G K Q V H - I - V Y - H N S R F I L F T G N R F I K F E Y I S I I Q D S F F L L W E T G S L N L S I L A - F K I H S F Y . : . . . . . 10439 ATCCTG : GTGTCGGAACGTGACACTCTGATCCTCTACTATCCTGGTGTCGGAACGTGATAC I L : V S E R D T L I L Y Y P G V G T - Y S W : C R N V T L - S S T I L V S E R D T Y P : G V G T - H S D P L L S W C R N V I . . . . . . 10344 TCGATCCATACTATCCTGGTGTCGAACGTGACACCCGATCCATACTATCCTGGTGTCGGA S I H T I L V S N V T P D P Y Y P G V G R S I L S W C R T - H P I H T I L V S E L D P Y Y P G V E R D T R S I L S W C R . . . . . . 10284 ACGTGACACCCGATCCATACTATCCTGGTGTCGGAACGTGACACCCGATCCATACTATCC T - H P I H T I L V S E R D T R S I L S R D T R S I L S W C R N V T P D P Y Y P N V T P D P Y Y P G V G T - H P I H T I . . . . . . 10224 TGGTGTCGGAATGTGACACTCCGATCCCCTAATTCTCATTCTTTCAGTTCATCAAGCCTT W C R N V T L R S P N S H S F S S S S L G V G M - H S D P L I L I L S V H Q A F L V S E C D T P I P - F S F F Q F I K P . . . 10164 CTTTTATACCAAGGTATCATCATTAACAA L L Y Q G I I I N F Y T K V S S L T S F I P R Y H H - Q Maximal non-overlapping open reading frames (>= 64 codons): none AGS-9 (10966 10435,10401 10368,10301 10183) SCR (e 0.788 d 0.000 a 0.000,e 0.882 d 0.000 a 0.000,e 0.777) Exon 1 10966 10435 ( 532 n); score: 0.788 Intron 1 10434 10402 ( 33 n); Pd: 0.000 Pa: 0.000 Exon 2 10401 10368 ( 34 n); score: 0.882 Intron 2 10367 10302 ( 66 n); Pd: 0.000 Pa: 0.000 Exon 3 10301 10183 ( 119 n); score: 0.777 PGS (10966 10435,10401 10368,10301 10183) SGN-E546506+ 3-phase translation of AGS-9 (-strand): . . . . . . 10966 TTATCATTATCCCCAAAATCTGGAAGTCATCATCACAAGAACATCTATCCTCAAATTACT L S L S P K S G S H H H K N I Y P Q I T Y H Y P Q N L E V I I T R T S I L K L L I I I P K I W K S S S Q E H L S S N Y . . . . . . 10906 AAATCTAAGAGTATCTAAGAAGCTAAAATAAATAAAAGAGATGGTCCATGTCCGAACTTC K S K S I - E A K I N K R D G P C P N F N L R V S K K L K - I K E M V H V R T S - I - E Y L R S - N K - K R W S M S E L . . . . . . 10846 AAGACATCAAGACCTGAAAGAAAGAATCCAGTCCGAGCTAGGAACAATAGCTCACCCTGA K T S R P E R K N P V R A R N N S S P - R H Q D L K E R I Q S E L G T I A H P E Q D I K T - K K E S S P S - E Q - L T L . . . . . . 10786 AATCTGATTATGCTGAAGTCTGGCTAGAGTTGTGGTTGAGTCGAAGTTGTTGGCACGTTT N L I M L K S G - S C G - V E V V G T F I - L C - S L A R V V V E S K L L A R L K S D Y A E V W L E L W L S R S C W H V . . . . . . 10726 GTTGCACTCCACAAATAACAAAGAAAGAAACATACAAGTAGGGGTCAGTACAAGGCACAA V A L H K - Q R K K H T S R G Q Y K A Q L H S T N N K E R N I Q V G V S T R H K C C T P Q I T K K E T Y K - G S V Q G T . . . . . . 10666 GTACTGAGTAGGTATCATCGGCCAACTCAAAATAGAAAACAATATACATCAGATAATAAC V L S R Y H R P T Q N R K Q Y T S D N N Y - V G I I G Q L K I E N N I H Q I I T S T E - V S S A N S K - K T I Y I R - - . . . . . . 10606 ATAAAATCAACTACAATACTCAACAGGTGACAACAACAAGTACCATAACCATTGGGCACA I K S T T I L N R - Q Q Q V P - P L G T - N Q L Q Y S T G D N N K Y H N H W A Q H K I N Y N T Q Q V T T T S T I T I G H . . . . . . 10546 ACCCAAGCACATCTATGAGGACTCAAGCCTCCACACCATACTCATTTGGGAAACAGGTTC T Q A H L - G L K P P H H T H L G N R F P K H I Y E D S S L H T I L I W E T G S N P S T S M R T Q A S T P Y S F G K Q V . . . . . . : 10486 ATTAAATTTGAGTATATTAGCATAATTCAAGATTCATTCTTTTTACTATCCT : CTGGTGTC I K F E Y I S I I Q D S F F L L S : S G V L N L S I L A - F K I H S F Y Y P : L V S H - I - V Y - H N S R F I L F T I L : W C . . . : . . . 10393 GGAACGTGACACTCTGATCCTCTACT : ACTATCCTGGTGTCGGAACGTGACACCCGATCCA G T - H S D P L L : L S W C R N V T P D P E R D T L I L Y : Y Y P G V G T - H P I H R N V T L - S S T : T I L V S E R D T R S . . . . . . 10267 TACTATCCTGGTGTCGGAACGTGACACCCGATCCATACTATCCTGGTGTCGGAATGTGAC Y Y P G V G T - H P I H T I L V S E C D T I L V S E R D T R S I L S W C R N V T I L S W C R N V T P D P Y Y P G V G M - . . . 10207 ACTCCGATCCCCTAATTCTCATTCT T P I P - F S F L R S P N S H S H S D P L I L I Maximal non-overlapping open reading frames (>= 64 codons): none PGL 4 (+ strand): 20912 21384 AGS-1 (20912 21350) SCR (e 0.902) Exon 1 20912 21350 ( 439 n); score: 0.902 PGS (20912 21133) SGN-E271645+ PGS (20919 21350) SGN-E211090- PGS (20919 21349) SGN-E206285+ PGS (20919 21177) SGN-E206496+ PGS (20919 21175) SGN-E207598+ PGS (20919 21160) SGN-E389613+ PGS (20919 21133) SGN-E370622+ PGS (20934 21350) SGN-E205772- PGS (20968 21350) SGN-E205773- PGS (21003 21332) SGN-E243194+ 3-phase translation of AGS-1 (+strand): . . . . . . 20912 TTGTTAGGACCGGAAATAAGAAGGTGTAAACGCGGAAGCTAGCAAAGCAAACCTCAAAAG L L G P E I R R C K R G S - Q S K P Q K C - D R K - E G V N A E A S K A N L K R V R T G N K K V - T R K L A K Q T S K . . . . . . 20972 ACCACGAGTAAGAATAAACGAGAAATATATCAAAAGACACAAAGATTTAACGTGATTCGG T T S K N K R E I Y Q K T Q R F N V I R P R V R I N E K Y I K R H K D L T - F G D H E - E - T R N I S K D T K I - R D S . . . . . . 21032 TCAATCGACCTACGTCCACAAAGGAGATGAGCAATCCACTATAAATATGAGAGTACAAAA S I D L R P Q R R - A I H Y K Y E S T K Q S T Y V H K G D E Q S T I N M R V Q N V N R P T S T K E M S N P L - I - E Y K . . . . . . 21092 TACAGAGAAAAACAACCTCAATCAATTCACTCGAAATACATGCGAGGTTCACAAGTGATA Y R E K Q P Q S I H S K Y M R G S Q V I T E K N N L N Q F T R N T C E V H K - - I Q R K T T S I N S L E I H A R F T S D . . . . . . 21152 ACATATCAAGCTTGTAACCCATAAATTCTCCACCTAACCAAAACTCTCAAAGCATTTAAG T Y Q A C N P - I L H L T K T L K A F K H I K L V T H K F S T - P K L S K H L R N I S S L - P I N S P P N Q N S Q S I - . . . . . . 21212 ACTACATTGTGAATGCTGATTAAGTTAGAAGAAACATGCCTCTATTTATAGAGTCCTAAA T T L - M L I K L E E T C L Y L - S P K L H C E C - L S - K K H A S I Y R V L N D Y I V N A D - V R R N M P L F I E S - . . . . . . 21272 CTTTTTCCTACCAGAAAAATATTAGTCATTCCAAAACTTTTTCCTAAAAGGAAAACCTAT L F P T R K I L V I P K L F P K R K T Y F F L P E K Y - S F Q N F F L K G K P I T F S Y Q K N I S H S K T F S - K E N L . . 21332 TTATGGTAAGAAATTTAGG L W - E I - Y G K K F R F M V R N L Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (-strand): . . . . . . 21350 CCTAAATTTCTTACCATAAATAGGTTTTCCTTTTAGGAAAAAGTTTTGGAATGACTAATA P K F L T I N R F S F - E K V L E - L I L N F L P - I G F P F R K K F W N D - Y - I S Y H K - V F L L G K S F G M T N . . . . . . 21290 TTTTTCTGGTAGGAAAAAGTTTAGGACTCTATAAATAGAGGCATGTTTCTTCTAACTTAA F F W - E K V - D S I N R G M F L L T - F S G R K K F R T L - I E A C F F - L N I F L V G K S L G L Y K - R H V S S N L . . . . . . 21230 TCAGCATTCACAATGTAGTCTTAAATGCTTTGAGAGTTTTGGTTAGGTGGAGAATTTATG S A F T M - S - M L - E F W L G G E F M Q H S Q C S L K C F E S F G - V E N L W I S I H N V V L N A L R V L V R W R I Y . . . . . . 21170 GGTTACAAGCTTGATATGTTATCACTTGTGAACCTCGCATGTATTTCGAGTGAATTGATT G Y K L D M L S L V N L A C I S S E L I V T S L I C Y H L - T S H V F R V N - L G L Q A - Y V I T C E P R M Y F E - I D . . . . . . 21110 GAGGTTGTTTTTCTCTGTATTTTGTACTCTCATATTTATAGTGGATTGCTCATCTCCTTT E V V F L C I L Y S H I Y S G L L I S F R L F F S V F C T L I F I V D C S S P L - G C F S L Y F V L S Y L - W I A H L L . . . . . . 21050 GTGGACGTAGGTCGATTGACCGAATCACGTTAAATCTTTGTGTCTTTTGATATATTTCTC V D V G R L T E S R - I F V S F D I F L W T - V D - P N H V K S L C L L I Y F S C G R R S I D R I T L N L C V F - Y I S . . . . . . 20990 GTTTATTCTTACTCGTGGTCTTTTGAGGTTTGCTTTGCTAGCTTCCGCGTTTACACCTTC V Y S Y S W S F E V C F A S F R V Y T F F I L T R G L L R F A L L A S A F T P S R L F L L V V F - G L L C - L P R L H L . . 20930 TTATTTCCGGTCCTAACAA L F P V L T Y F R S - Q L I S G P N Maximal non-overlapping open reading frames (>= 64 codons): none AGS-2 (20920 21137,21272 21384) SCR (e 0.892 d 0.699 a 0.000,e 0.810) Exon 1 20920 21137 ( 218 n); score: 0.892 Intron 1 21138 21271 ( 134 n); Pd: 0.699 Pa: 0.000 Exon 2 21272 21384 ( 113 n); score: 0.810 PGS (20920 21137,21272 21384) SGN-E543331- 3-phase translation of AGS-2 (+strand): . . . . . . 20920 ACCGGAAATAAGAAGGTGTAAACGCGGAAGCTAGCAAAGCAAACCTCAAAAGACCACGAG T G N K K V - T R K L A K Q T S K D H E P E I R R C K R G S - Q S K P Q K T T S R K - E G V N A E A S K A N L K R P R . . . . . . 20980 TAAGAATAAACGAGAAATATATCAAAAGACACAAAGATTTAACGTGATTCGGTCAATCGA - E - T R N I S K D T K I - R D S V N R K N K R E I Y Q K T Q R F N V I R S I D V R I N E K Y I K R H K D L T - F G Q S . . . . . . 21040 CCTACGTCCACAAAGGAGATGAGCAATCCACTATAAATATGAGAGTACAAAATACAGAGA P T S T K E M S N P L - I - E Y K I Q R L R P Q R R - A I H Y K Y E S T K Y R E T Y V H K G D E Q S T I N M R V Q N T E . . . . : . . 21100 AAAACAACCTCAATCAATTCACTCGAAATACATGCGAG : CTTTTTCCTACCAGAAAAATAT K T T S I N S L E I H A S : F F L P E K Y K Q P Q S I H S K Y M R : A F S Y Q K N I K N N L N Q F T R N T C E : L F P T R K I . . . . . . 21294 TAGTCATTCCAAAACTTTTTCCTAAAAGGAAAACCTATTTATGGTAAGAAATTTAGGGCA - S F Q N F F L K G K P I Y G K K F R A S H S K T F S - K E N L F M V R N L G Q L V I P K L F P K R K T Y L W - E I - G . . . . 21354 AATAATATCCAACCTACATTACTGAATTTAT N N I Q P T L L N L I I S N L H Y - I Y K - Y P T Y I T E F Maximal non-overlapping open reading frames (>= 64 codons): none PGL 5 (- strand): 27321 26832 AGS-1 (27321 26832) SCR (e 0.871) Exon 1 27321 26832 ( 490 n); score: 0.871 PGS (27321 26832) SGN-E275314+ 3-phase translation of AGS-1 (-strand): . . . . . . 27321 AGAAGCAAGATTGGTTTTCTATATGAAAAGGGTTTTCCAAAGCCGACGAACGTTTTGGAA R S K I G F L Y E K G F P K P T N V L E E A R L V F Y M K R V F Q S R R T F W N K Q D W F S I - K G F S K A D E R F G . . . . . . 27261 CTTGATGCCTGGAAAGCGAACAATTCCATCATTTGTTCGTGGATTTTTAACAGCGCCGAC L D A W K A N N S I I C S W I F N S A D L M P G K R T I P S F V R G F L T A P T T - C L E S E Q F H H L F V D F - Q R R . . . . . . 27201 GAGACGATCCAGCCGAGTCTCGTCGCTCAAAAAATTGCCCACGAATTGTGGACCGATATG E T I Q P S L V A Q K I A H E L W T D M R R S S R V S S L K K L P T N C G P I - R D D P A E S R R S K N C P R I V D R Y . . . . . . 27141 AAGGCACGATATGGAGGCACGAATGCTCCTAAATCGTGGCAGTTAAAGTCTGACCTACAA K A R Y G G T N A P K S W Q L K S D L Q R H D M E A R M L L N R G S - S L T Y K E G T I W R H E C S - I V A V K V - P T . . . . . . 27081 ATGTTGAGGCAAAAAGGTCAGTCTGTAGTCTCGTACTACAATCAGTTCATCATTGTCTGG M L R Q K G Q S V V S Y Y N Q F I I V W C - G K K V S L - S R T T I S S S L S G N V E A K R S V C S L V L Q S V H H C L . . . . . . 27021 AACCAATTGTATGGTTCGATTGATCCAACTTGCGGGTGTATATGTCCTGCGGCTGCAAAA N Q L Y G S I D P T C G C I C P A A A K T N C M V R L I Q L A G V Y V L R L Q K E P I V W F D - S N L R V Y M S C G C K . . . . . . 26961 ATGCGTCTTCGATTTGAGGAGGAGAAGACGCAGGCGTTTCTCCTCGGGCTTGATGATGCT M R L R F E E E K T Q A F L L G L D D A C V F D L R R R R R R R F S S G L M M L N A S S I - G G E D A G V S P R A - - C . . . . . . 26901 CAGTTCGGGGCGACTCGCTCTCAGATCTTCGGCACCCGCCCACTTCCTGTTCTCAACGAA Q F G A T R S Q I F G T R P L P V L N E S S G R L A L R S S A P A H F L F S T K S V R G D S L S D L R H P P T S C S Q R . 26841 GCCTACTATC A Y Y P T I S L L Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-5_AGS-1_PPS_1 (27321 26833) (frame '1'; 489 bp, 163 residues) 1 RSKIGFLYEK GFPKPTNVLE LDAWKANNSI ICSWIFNSAD ETIQPSLVAQ KIAHELWTDM 61 KARYGGTNAP KSWQLKSDLQ MLRQKGQSVV SYYNQFIIVW NQLYGSIDPT CGCICPAAAK 121 MRLRFEEEKT QAFLLGLDDA QFGATRSQIF GTRPLPVLNE AYY 3-phase translation of AGS-1 (+strand): . . . . . . 26832 GATAGTAGGCTTCGTTGAGAACAGGAAGTGGGCGGGTGCCGAAGATCTGAGAGCGAGTCG D S R L R - E Q E V G G C R R S E S E S I V G F V E N R K W A G A E D L R A S R - - A S L R T G S G R V P K I - E R V . . . . . . 26892 CCCCGAACTGAGCATCATCAAGCCCGAGGAGAAACGCCTGCGTCTTCTCCTCCTCAAATC P R T E H H Q A R G E T P A S S P P Q I P E L S I I K P E E K R L R L L L L K S A P N - A S S S P R R N A C V F S S S N . . . . . . 26952 GAAGACGCATTTTTGCAGCCGCAGGACATATACACCCGCAAGTTGGATCAATCGAACCAT E D A F L Q P Q D I Y T R K L D Q S N H K T H F C S R R T Y T P A S W I N R T I R R R I F A A A G H I H P Q V G S I E P . . . . . . 27012 ACAATTGGTTCCAGACAATGATGAACTGATTGTAGTACGAGACTACAGACTGACCTTTTT T I G S R Q - - T D C S T R L Q T D L F Q L V P D N D E L I V V R D Y R L T F L Y N W F Q T M M N - L - Y E T T D - P F . . . . . . 27072 GCCTCAACATTTGTAGGTCAGACTTTAACTGCCACGATTTAGGAGCATTCGTGCCTCCAT A S T F V G Q T L T A T I - E H S C L H P Q H L - V R L - L P R F R S I R A S I C L N I C R S D F N C H D L G A F V P P . . . . . . 27132 ATCGTGCCTTCATATCGGTCCACAATTCGTGGGCAATTTTTTGAGCGACGAGACTCGGCT I V P S Y R S T I R G Q F F E R R D S A S C L H I G P Q F V G N F L S D E T R L Y R A F I S V H N S W A I F - A T R L G . . . . . . 27192 GGATCGTCTCGTCGGCGCTGTTAAAAATCCACGAACAAATGATGGAATTGTTCGCTTTCC G S S R R R C - K S T N K - W N C S L S D R L V G A V K N P R T N D G I V R F P W I V S S A L L K I H E Q M M E L F A F . . . . . . 27252 AGGCATCAAGTTCCAAAACGTTCGTCGGCTTTGGAAAACCCTTTTCATATAGAAAACCAA R H Q V P K R S S A L E N P F H I E N Q G I K F Q N V R R L W K T L F I - K T N Q A S S S K T F V G F G K P F S Y R K P . 27312 TCTTGCTTCT S C F L A S I L L Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-5_AGS-1_PPS_1 (26833 27087) (frame '2'; 252 bp, 84 residues) 1 IVGFVENRKW AGAEDLRASR PELSIIKPEE KRLRLLLLKS KTHFCSRRTY TPASWINRTI 61 QLVPDNDELI VVRDYRLTFL PQHL- >C08HBa0294K15.1+_PGL-5_AGS-1_PPS_2 (27100 27303) (frame '2'; 201 bp, 67 residues) 1 LPRFRSIRAS ISCLHIGPQF VGNFLSDETR LDRLVGAVKN PRTNDGIVRF PGIKFQNVRR 61 LWKTLFI- PGL 6 (- strand): 29496 28792 AGS-1 (29496 29162,29009 28934,28884 28792) SCR (e 0.875 d 0.000 a 0.000,e 0.895 d 0.782 a 0.000,e 0.860) Exon 1 29496 29162 ( 335 n); score: 0.875 Intron 1 29161 29010 ( 152 n); Pd: 0.000 Pa: 0.000 Exon 2 29009 28934 ( 76 n); score: 0.895 Intron 2 28933 28885 ( 49 n); Pd: 0.782 Pa: 0.000 Exon 3 28884 28792 ( 93 n); score: 0.860 PGS (29221 29162,29009 28934,28884 28792) SGN-E578389+ PGS (29496 29158) SGN-E394141+ PGS (29496 29205) SGN-E392605+ 3-phase translation of AGS-1 (-strand): . . . . . . 29496 GGAAAATTGTATAAAATAGCAAATTAATAACCTAAATTAAATTGAATAGCTAGGGTTTGA G K L Y K I A N - - P K L N - I A R V - E N C I K - Q I N N L N - I E - L G F D K I V - N S K L I T - I K L N S - G L . . . . . . 29436 TTTAATTGTGCTCCATAGCAAACATTGACAAAAAATTGCCAGGCGTCTCTCTCCCAGAAG F N C A P - Q T L T K N C Q A S L S Q K L I V L H S K H - Q K I A R R L S P R S I - L C S I A N I D K K L P G V S L P E . . . . . . 29376 TCTCGCTCGCCACTCTCCCATTCTCGCCTCTCTCGCTTTATACACAAAAGTGTATAATTT S R S P L S H S R L S R F I H K S V - F L A R H S P I L A S L A L Y T K V Y N F V S L A T L P F S P L S L Y T Q K C I I . . . . . . 29316 CTGTTTCTGTTTTGTATAAAGCGAGAGAAAATTGTATTTACACATGCAAAAATGTATATC L F L F C I K R E K I V F T H A K M Y I C F C F V - S E R K L Y L H M Q K C I S S V S V L Y K A R E N C I Y T C K N V Y . . . . . . 29256 TTCGTGTTATACACTTAATTATATAATTTACAAACATTTTACTTCAAATATTGCAGAGAA F V L Y T - L Y N L Q T F Y F K Y C R E S C Y T L N Y I I Y K H F T S N I A E K L R V I H L I I - F T N I L L Q I L Q R . . . . : . . 29196 AAAGGCCAAAAAATTATACAATTGTGAATTATACA : GCAAAGCTAATTATACAATTGCGGC K G Q K I I Q L - I I Q : Q S - L Y N C G K A K K L Y N C E L Y : S K A N Y T I A A K R P K N Y T I V N Y T : A K L I I Q L R . . . . . . : 28984 GAAATAGGCCAGCGAATTATACAATTTAAGCCAGCGAATTATACAATTTAG : TGTTTGCTA E I G Q R I I Q F K P A N Y T I - : C L L K - A S E L Y N L S Q R I I Q F S : V C Y R N R P A N Y T I - A S E L Y N L : V F A . . . . . . 28875 TGGAGCGCAATTATGCAAAGTTTGCTATATTATACAAATATGATTTTTTTGTTTGCTATA W S A I M Q S L L Y Y T N M I F L F A I G A Q L C K V C Y I I Q I - F F C L L Y M E R N Y A K F A I L Y K Y D F F V C Y . . . 28815 TGTGAAAGTTGCCTAAAAAAACGA C E S C L K K R V K V A - K N M - K L P K K T Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-6_AGS-1_PPS_1 (29431 29231) (frame '0'; 198 bp, 66 residues) 1 LCSIANIDKK LPGVSLPEVS LATLPFSPLS LYTQKCIISV SVLYKARENC IYTCKNVYLR 61 VIHLII- AGS-2 (29496 28956) SCR (e 0.888) Exon 1 29496 28956 ( 541 n); score: 0.888 PGS (29216 28956) SGN-E379427+ PGS (29496 29027) SGN-E394609- PGS (29496 29027) SGN-E379112+ PGS (29493 29027) SGN-E393065- PGS (29349 29027) SGN-E393076- PGS (29331 29027) SGN-E393075- PGS (29177 29027) SGN-E392727- PGS (29496 29028) SGN-E379618- PGS (29472 29028) SGN-E200845- 3-phase translation of AGS-2 (-strand): . . . . . . 29496 GGAAAATTGTATAAAATAGCAAATTAATAACCTAAATTAAATTGAATAGCTAGGGTTTGA G K L Y K I A N - - P K L N - I A R V - E N C I K - Q I N N L N - I E - L G F D K I V - N S K L I T - I K L N S - G L . . . . . . 29436 TTTAATTGTGCTCCATAGCAAACATTGACAAAAAATTGCCAGGCGTCTCTCTCCCAGAAG F N C A P - Q T L T K N C Q A S L S Q K L I V L H S K H - Q K I A R R L S P R S I - L C S I A N I D K K L P G V S L P E . . . . . . 29376 TCTCGCTCGCCACTCTCCCATTCTCGCCTCTCTCGCTTTATACACAAAAGTGTATAATTT S R S P L S H S R L S R F I H K S V - F L A R H S P I L A S L A L Y T K V Y N F V S L A T L P F S P L S L Y T Q K C I I . . . . . . 29316 CTGTTTCTGTTTTGTATAAAGCGAGAGAAAATTGTATTTACACATGCAAAAATGTATATC L F L F C I K R E K I V F T H A K M Y I C F C F V - S E R K L Y L H M Q K C I S S V S V L Y K A R E N C I Y T C K N V Y . . . . . . 29256 TTCGTGTTATACACTTAATTATATAATTTACAAACATTTTACTTCAAATATTGCAGAGAA F V L Y T - L Y N L Q T F Y F K Y C R E S C Y T L N Y I I Y K H F T S N I A E K L R V I H L I I - F T N I L L Q I L Q R . . . . . . 29196 AAAGGCCAAAAAATTATACAATTGTGAATTATACAATTGCAGTGAAATACAATTTTTTCT K G Q K I I Q L - I I Q L Q - N T I F S K A K K L Y N C E L Y N C S E I Q F F L K R P K N Y T I V N Y T I A V K Y N F F . . . . . . 29136 AGTTTTATACAACAGAAGTGTATATATTGTGTTTCTGTTTTTGTATAAAGCGACAAAAAC S F I Q Q K C I Y C V S V F V - S D K N V L Y N R S V Y I V F L F L Y K A T K T - F Y T T E V Y I L C F C F C I K R Q K . . . . . . 29076 ATATATCTTCTTGCTATACACTTATAATTATGCAATATACATACATTTTAATTCGATTCA I Y L L A I H L - L C N I H T F - F D S Y I F L L Y T Y N Y A I Y I H F N S I Q H I S S C Y T L I I M Q Y T Y I L I R F . . . . . . 29016 ACTGTATGCAAAGCTAATTATACAATTGCGGCGAAATAGGCCAGCGAATTATACAATTTA T V C K A N Y T I A A K - A S E L Y N L L Y A K L I I Q L R R N R P A N Y T I - N C M Q S - L Y N C G E I G Q R I I Q F . 28956 A Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-6_AGS-2_PPS_1 (29297 28956) (frame '2'; 339 bp, 113 residues) 1 SERKLYLHMQ KCISSCYTLN YIIYKHFTSN IAEKKAKKLY NCELYNCSEI QFFLVLYNRS 61 VYIVFLFLYK ATKTYIFLLY TYNYAIYIHF NSIQLYAKLI IQLRRNRPAN YTI- 3-phase translation of AGS-2 (+strand): . . . . . . 28956 TTAAATTGTATAATTCGCTGGCCTATTTCGCCGCAATTGTATAATTAGCTTTGCATACAG L N C I I R W P I S P Q L Y N - L C I Q - I V - F A G L F R R N C I I S F A Y S K L Y N S L A Y F A A I V - L A L H T . . . . . . 29016 TTGAATCGAATTAAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAAGATATA L N R I K M Y V Y C I I I S V - Q E D I - I E L K C M Y I A - L - V Y S K K I Y V E S N - N V C I L H N Y K C I A R R Y . . . . . . 29076 TGTTTTTGTCGCTTTATACAAAAACAGAAACACAATATATACACTTCTGTTGTATAAAAC C F C R F I Q K Q K H N I Y T S V V - N V F V A L Y K N R N T I Y T L L L Y K T M F L S L Y T K T E T Q Y I H F C C I K . . . . . . 29136 TAGAAAAAATTGTATTTCACTGCAATTGTATAATTCACAATTGTATAATTTTTTGGCCTT - K K L Y F T A I V - F T I V - F F G L R K N C I S L Q L Y N S Q L Y N F L A F L E K I V F H C N C I I H N C I I F W P . . . . . . 29196 TTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTATATAATTAAGTGTATAACACGA F L C N I - S K M F V N Y I I K C I T R F S A I F E V K C L - I I - L S V - H E F S L Q Y L K - N V C K L Y N - V Y N T . . . . . . 29256 AGATATACATTTTTGCATGTGTAAATACAATTTTCTCTCGCTTTATACAAAACAGAAACA R Y T F L H V - I Q F S L A L Y K T E T D I H F C M C K Y N F L S L Y T K Q K Q K I Y I F A C V N T I F S R F I Q N R N . . . . . . 29316 GAAATTATACACTTTTGTGTATAAAGCGAGAGAGGCGAGAATGGGAGAGTGGCGAGCGAG E I I H F C V - S E R G E N G R V A S E K L Y T F V Y K A R E A R M G E W R A R R N Y T L L C I K R E R R E W E S G E R . . . . . . 29376 ACTTCTGGGAGAGAGACGCCTGGCAATTTTTTGTCAATGTTTGCTATGGAGCACAATTAA T S G R E T P G N F L S M F A M E H N - L L G E R R L A I F C Q C L L W S T I K D F W E R D A W Q F F V N V C Y G A Q L . . . . . . 29436 ATCAAACCCTAGCTATTCAATTTAATTTAGGTTATTAATTTGCTATTTTATACAATTTTC I K P - L F N L I - V I N L L F Y T I F S N P S Y S I - F R L L I C Y F I Q F S N Q T L A I Q F N L G Y - F A I L Y N F . 29496 C Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-6_AGS-2_PPS_1 (29243 29473) (frame '0'; 228 bp, 76 residues) 1 VYNTKIYIFA CVNTIFSRFI QNRNRNYTLL CIKRERREWE SGERDFWERD AWQFFVNVCY 61 GAQLNQTLAI QFNLGY- >C08HBa0294K15.1+_PGL-6_AGS-2_PPS_2 (29251 29460) (frame '2'; 207 bp, 69 residues) 1 HEDIHFCMCK YNFLSLYTKQ KQKLYTFVYK AREARMGEWR ARLLGERRLA IFCQCLLWST 61 IKSNPSYSI- PGL 7 (+ strand): 42243 42623 AGS-1 (42243 42623) SCR (e 0.972) Exon 1 42243 42623 ( 381 n); score: 0.972 PGS (42243 42623) SGN-E300332+ 3-phase translation of AGS-1 (+strand): . . . . . . 42243 TTATAGTCAATCTAAAACATGCCAAAGCTGAACAAGTATGGCCACTCCTTGAAGATTTCT L - S I - N M P K L N K Y G H S L K I S Y S Q S K T C Q S - T S M A T P - R F L I V N L K H A K A E Q V W P L L E D F . . . . . . 42303 TCAACTTCCACAAATGGCTACCAAACATTGACACTTGTCACCAAATTGATAGTGATAATA S T S T N G Y Q T L T L V T K L I V I I Q L P Q M A T K H - H L S P N - - - - - F N F H K W L P N I D T C H Q I D S D N . . . . . . 42363 AAGATGAAATTATCCGCTACTGCGCTAGCACCACGCCCCTATCGTCAGGCGATGGGGAAG K M K L S A T A L A P R P Y R Q A M G K R - N Y P L L R - H H A P I V R R W G S K D E I I R Y C A S T T P L S S G D G E . . . . . . 42423 CGATCATCAAGTGGTGTCACGAGAAGTTGCTGACGATTGATAAGATAGAGCGATGTATCA R S S S G V T R S C - R L I R - S D V S D H Q V V S R E V A D D - - D R A M Y Q A I I K W C H E K L L T I D K I E R C I . . . . . . 42483 GCTATGAGGTCTTAGATAACAATATCGGGATCAAGTATTATGTATCTACGTTGAAAGTGT A M R S - I T I S G S S I M Y L R - K C L - G L R - Q Y R D Q V L C I Y V E S V S Y E V L D N N I G I K Y Y V S T L K V . . . . . . 42543 TGTCATTGGATGAGGGCGGGTGCCAGATCGAGTGGTTGTTCGTTGCTGATCCGATTGATG C H W M R A G A R S S G C S L L I R L M V I G - G R V P D R V V V R C - S D - W L S L D E G G C Q I E W L F V A D P I D . . . 42603 GGTTGACTTTGGAATTATTTT G - L W N Y F V D F G I I G L T L E L F Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-7_AGS-1_PPS_1 (42245 42622) (frame '0'; 378 bp, 126 residues) 1 IVNLKHAKAE QVWPLLEDFF NFHKWLPNID TCHQIDSDNK DEIIRYCAST TPLSSGDGEA 61 IIKWCHEKLL TIDKIERCIS YEVLDNNIGI KYYVSTLKVL SLDEGGCQIE WLFVADPIDG 121 LTLELF 3-phase translation of AGS-1 (-strand): . . . . . . 42623 AAAATAATTCCAAAGTCAACCCATCAATCGGATCAGCAACGAACAACCACTCGATCTGGC K I I P K S T H Q S D Q Q R T T T R S G K - F Q S Q P I N R I S N E Q P L D L A N N S K V N P S I G S A T N N H S I W . . . . . . 42563 ACCCGCCCTCATCCAATGACAACACTTTCAACGTAGATACATAATACTTGATCCCGATAT T R P H P M T T L S T - I H N T - S R Y P A L I Q - Q H F Q R R Y I I L D P D I H P P S S N D N T F N V D T - Y L I P I . . . . . . 42503 TGTTATCTAAGACCTCATAGCTGATACATCGCTCTATCTTATCAATCGTCAGCAACTTCT C Y L R P H S - Y I A L S Y Q S S A T S V I - D L I A D T S L Y L I N R Q Q L L L L S K T S - L I H R S I L S I V S N F . . . . . . 42443 CGTGACACCACTTGATGATCGCTTCCCCATCGCCTGACGATAGGGGCGTGGTGCTAGCGC R D T T - - S L P H R L T I G A W C - R V T P L D D R F P I A - R - G R G A S A S - H H L M I A S P S P D D R G V V L A . . . . . . 42383 AGTAGCGGATAATTTCATCTTTATTATCACTATCAATTTGGTGACAAGTGTCAATGTTTG S S G - F H L Y Y H Y Q F G D K C Q C L V A D N F I F I I T I N L V T S V N V W Q - R I I S S L L S L S I W - Q V S M F . . . . . . 42323 GTAGCCATTTGTGGAAGTTGAAGAAATCTTCAAGGAGTGGCCATACTTGTTCAGCTTTGG V A I C G S - R N L Q G V A I L V Q L W - P F V E V E E I F K E W P Y L F S F G G S H L W K L K K S S R S G H T C S A L . . . 42263 CATGTTTTAGATTGACTATAA H V L D - L - M F - I D Y A C F R L T I Maximal non-overlapping open reading frames (>= 64 codons): none PGL 8 (- strand): 46905 43169 AGS-1 (46905 46425,45118 45080,44892 44822,44295 44231,44007 43918,43836 43744,43639 43169) SCR (e 1.000 d 0.988 a 0.995,e 1.000 d 0.955 a 0.957,e 1.000 d 0.951 a 0.993,e 1.000 d 0.991 a 0.993,e 1.000 d 0.783 a 0.982,e 1.000 d 0.954 a 0.998,e 1.000) Exon 1 46905 46425 ( 481 n); score: 1.000 Intron 1 46424 45119 (1306 n); Pd: 0.988 Pa: 0.995 Exon 2 45118 45080 ( 39 n); score: 1.000 Intron 2 45079 44893 ( 187 n); Pd: 0.955 Pa: 0.957 Exon 3 44892 44822 ( 71 n); score: 1.000 Intron 3 44821 44296 ( 526 n); Pd: 0.951 Pa: 0.993 Exon 4 44295 44231 ( 65 n); score: 1.000 Intron 4 44230 44008 ( 223 n); Pd: 0.991 Pa: 0.993 Exon 5 44007 43918 ( 90 n); score: 1.000 Intron 5 43917 43837 ( 81 n); Pd: 0.783 Pa: 0.982 Exon 6 43836 43744 ( 93 n); score: 1.000 Intron 6 43743 43640 ( 104 n); Pd: 0.954 Pa: 0.998 Exon 7 43639 43169 ( 471 n); score: 1.000 PGS (44236 44231,44007 43918,43836 43744,43639 43169) SGN-E276694+ PGS (46905 46425,45118 45080,44892 44822,44295 44231,44007 43918,43836 43817) SGN-E261872+ PGS (46905 46425,45118 45080,44892 44822,44295 44231,44007 43942) SGN-E258769+ PGS (46889 46425,45118 45080,44892 44822,44295 44256) SGN-E207363+ PGS (46877 46425,45118 45081) SGN-E202493+ PGS (46875 46464) SGN-E277658+ PGS (46905 46613) SGN-E260416+ 3-phase translation of AGS-1 (-strand): . . . . . . 46905 AAAAACCCCATTCACAAAAGCTTCATTCTTCAATTTTCACATAATTTTTTTTTCTTCATT K N P I H K S F I L Q F S H N F F F F I K T P F T K A S F F N F H I I F F S S F K P H S Q K L H S S I F T - F F F L H . . . . . . 46845 TGATGGAATCTTCGTTGCCGGTGGAGGAGCTTACTTCCGGCGCAAGTGGTCGGATAATTC - W N L R C R W R S L L P A Q V V G - F D G I F V A G G G A Y F R R K W S D N S L M E S S L P V E E L T S G A S G R I I . . . . . . 46785 CTCTTTTCAAAAATCTTCACCGGTCAGTTTTCTCATACCAAACTTACCGGAGACTAATTA L F S K I F T G Q F S H T K L T G D - L S F Q K S S P V S F L I P N L P E T N Y P L F K N L H R S V F S Y Q T Y R R L I . . . . . . 46725 TATTTATACAGTCTATTTTCCTATGGGTAATTCTTCTGTCTCGACGGAGGTTCTCCACGT Y L Y S L F S Y G - F F C L D G G S P R I Y T V Y F P M G N S S V S T E V L H V I F I Q S I F L W V I L L S R R R F S T . . . . . . 46665 CACCTTCGTCTCCTCCGCCTTCGCCATCTGCAGCTACTACGGCGGTGTTGGGGAAGAGGA H L R L L R L R H L Q L L R R C W G R G T F V S S A F A I C S Y Y G G V G E E E S P S S P P P S P S A A T T A V L G K R . . . . . . 46605 GGAAATTTGCTTTGCGGAGGGATGAAGAGGATACGCAGAGAAGGAGGGCTCTTGCTGAGG G N L L C G G M K R I R R E G G L L L R E I C F A E G - R G Y A E K E G S C - G R K F A L R R D E E D T Q R R R A L A E . . . . . . 46545 CGTTAGATATGACGGTTGAGAATGACGGTGTGAGCTGCCGTTGGAATACGTCTTTGTTCT R - I - R L R M T V - A A V G I R L C S V R Y D G - E - R C E L P L E Y V F V L A L D M T V E N D G V S C R W N T S L F . . . . . . 46485 TTGGGGCTCGTCGGAATGCTTTGTTTTGCCGATCGTGGTTTCCGGTTACAGATGAATTGA L G L V G M L C F A D R G F R L Q M N - W G S S E C F V L P I V V S G Y R - I E F G A R R N A L F C R S W F P V T D E L . : . . . : . . 46425 G : GGGCATAATTATCATCATCCATGGACTGAATGAGCACAG : TGGACGATATGCTCATTTTG : G A - L S S S M D - M S T : V D D M L I L : G H N Y H H P W T E - A Q : W T I C S F C R : G I I I I I H G L N E H S : G R Y A H F . . . . . . : 44872 CTAGGCAACTGAACTCCTGCAACTTTGGGGTGTATGCAATGGACTGGATAG : GTCATGGAG L G N - T P A T L G C M Q W T G - : V M E - A T E L L Q L W G V C N G L D R : S W R A R Q L N S C N F G V Y A M D W I : G H G . . . . . . : 44286 GGAGTGATGGATTACATGGATACGTGCCATCTTTGGACCATGTTGTGGCAGACACA : GGGG G V M D Y M D T C H L W T M L W Q T Q : G E - W I T W I R A I F G P C C G R H : R G G S D G L H G Y V P S L D H V V A D T : G . . . . . . 44003 CTTTCTTGGAAAAGGTCAAGTTTGACAACCCTGGTATACCATGCTTCCTCTTTGGTCATT L S W K R S S L T T L V Y H A S S L V I F L G K G Q V - Q P W Y T M L P L W S F A F L E K V K F D N P G I P C F L F G H . . . : . . . 43943 CAACGGGAGGAGCGGTGGTCTTAAAG : GCAGCTTCTTATCCACATATTGAAAACATGGTGG Q R E E R W S - R : Q L L I H I L K T W W N G R S G G L K : G S F L S T Y - K H G G S T G G A V V L K : A A S Y P H I E N M V . . . . . . : 43802 AGGGCATCATATTGACTTCACCAGCATTGCGTGTGAAACCTGCAAATCCTATTGTTAGT : G R A S Y - L H Q H C V - N L Q I L L L V : G H H I D F T S I A C E T C K S Y C - : C E G I I L T S P A L R V K P A N P I V S : . . . . . . 43638 CTGTGGCACCAATTTTTTCATTGGTTGCACCTAGGTACCAGTTCAAAGGTTCTCACAAAA L W H Q F F H W L H L G T S S K V L T K C G T N F F I G C T - V P V Q R F S Q K A V A P I F S L V A P R Y Q F K G S H K . . . . . . 43578 GGGGAATCCCTGTTTCAAGGGATCCTGCCGCACTGGTGGCTAAGTATTCTGACCCTCTAG G E S L F Q G I L P H W W L S I L T L - G N P C F K G S C R T G G - V F - P S S R G I P V S R D P A A L V A K Y S D P L . . . . . . 43518 TGTATACTGGGCCTTTGAGGGTGAGGACAGGGCATGAGATTCTGCGTATCTCGTCTTACT C I L G L - G - G Q G M R F C V S R L T V Y W A F E G E D R A - D S A Y L V L L V Y T G P L R V R T G H E I L R I S S Y . . . . . . 43458 TGATGCGGAACTTCAAGTCAGTCACTGTCCCATTCTTAGTCCTCCATGGATCTGCTGATA - C G T S S Q S L S H S - S S M D L L I D A E L Q V S H C P I L S P P W I C - - L M R N F K S V T V P F L V L H G S A D . . . . . . 43398 GAGTGACTGATCCATTGGCTTCTCAAGATTTGTACAATGAGGCTGCTTCTGAATTCAAAG E - L I H W L L K I C T M R L L L N S K S D - S I G F S R F V Q - G C F - I Q R R V T D P L A S Q D L Y N E A A S E F K . . . . . . 43338 ACATTAAACTTTATGATGGATTCTTGCACGATCTTCTATTTGAGCCTGAGCGTGAAGAAA T L N F M M D S C T I F Y L S L S V K K H - T L - W I L A R S S I - A - A - R N D I K L Y D G F L H D L L F E P E R E E . . . . . . 43278 TTGCCCAGGATATCATTGATTGGATGCACAAGAAGTTAGATTCTGGCAATCTTGCAAATG L P R I S L I G C T R S - I L A I L Q M C P G Y H - L D A Q E V R F W Q S C K C I A Q D I I D W M H K K L D S G N L A N . . . . . 43218 TGTATAGTCAGTGCTAGTTTTCTAAATCATTAGTGTTTTGATTGATCAAA C I V S A S F L N H - C F D - S V - S V L V F - I I S V L I D Q V Y S Q C - F S K S L V F - L I K Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-8_AGS-1_PPS_1 (46861 46425,45118 45080,44892 44822,44295 44231,44007 43918,43836 43744,43639 43202) (frame '0'; 1230 bp, 410 residues) 1 FFFLHLMESS LPVEELTSGA SGRIIPLFKN LHRSVFSYQT YRRLIIFIQS IFLWVILLSR 61 RRFSTSPSSP PPSPSAATTA VLGKRRKFAL RRDEEDTQRR RALAEALDMT VENDGVSCRW 121 NTSLFFGARR NALFCRSWFP VTDELRGIII IIHGLNEHSG RYAHFARQLN SCNFGVYAMD 181 WIGHGGSDGL HGYVPSLDHV VADTGAFLEK VKFDNPGIPC FLFGHSTGGA VVLKAASYPH 241 IENMVEGIIL TSPALRVKPA NPIVSAVAPI FSLVAPRYQF KGSHKRGIPV SRDPAALVAK 301 YSDPLVYTGP LRVRTGHEIL RISSYLMRNF KSVTVPFLVL HGSADRVTDP LASQDLYNEA 361 ASEFKDIKLY DGFLHDLLFE PEREEIAQDI IDWMHKKLDS GNLANVYSQC - AGS-2 (44118 43918,43836 43796) SCR (e 0.995 d 0.783 a 0.982,e 1.000) Exon 1 44118 43918 ( 201 n); score: 0.995 Intron 1 43917 43837 ( 81 n); Pd: 0.783 Pa: 0.982 Exon 2 43836 43796 ( 41 n); score: 1.000 PGS (44118 43918,43836 43796) SGN-E239892+ 3-phase translation of AGS-2 (-strand): . . . . . . 44118 ACAAGCTGAAACTGTGATCTTCATTCTACATTCATCTTTCTTTCATTGTTTTCTTGCCTC T S - N C D L H S T F I F L S L F S C L Q A E T V I F I L H S S F F H C F L A S K L K L - S S F Y I H L S F I V F L P . . . . . . 44058 ATCCATAGAGCCTGCCAATTTACCCACTATATTCTTTTCATGTTTATACAGGGGGCTTTC I H R A C Q F T H Y I L F M F I Q G A F S I E P A N L P T I F F S C L Y R G L S H P - S L P I Y P L Y S F H V Y T G G F . . . . . . 43998 TTGGAAAAGGTCAAGTTTGACAACCCTGGTATACCATGCTTCCTCTTTGGTCATTCAACG L E K V K F D N P G I P C F L F G H S T W K R S S L T T L V Y H A S S L V I Q R L G K G Q V - Q P W Y T M L P L W S F N . . . : . . . 43938 GGAGGAGCGGTGGTCTTAAAG : GCAGCTTCTTATCCACATATTGAAAACATGGTGGAGGGC G G A V V L K : A A S Y P H I E N M V E G E E R W S - R : Q L L I H I L K T W W R A G R S G G L K : G S F L S T Y - K H G G G . 43797 AT H Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-8_AGS-2_PPS_1 (44109 43918,43836 43798) (frame '1'; 231 bp, 77 residues) 1 NCDLHSTFIF LSLFSCLIHR ACQFTHYILF MFIQGAFLEK VKFDNPGIPC FLFGHSTGGA 61 VVLKAASYPH IENMVEG PGL 9 (- strand): 62026 51855 AGS-1 (57574 57365,57090 57064,55519 55477,53841 53804,52243 52223,51878 51855) SCR (e 0.823 d 0.000 a 0.000,e 0.704 d 0.089 a 0.000,e 0.581 d 0.190 a 0.000,e 0.592 d 0.909 a 0.000,e 0.762 d 0.900 a 0.382,e 0.750) Exon 1 57574 57365 ( 210 n); score: 0.823 Intron 1 57364 57091 ( 274 n); Pd: 0.000 Pa: 0.000 Exon 2 57090 57064 ( 27 n); score: 0.704 Intron 2 57063 55520 (1544 n); Pd: 0.089 Pa: 0.000 Exon 3 55519 55477 ( 43 n); score: 0.581 Intron 3 55476 53842 (1635 n); Pd: 0.190 Pa: 0.000 Exon 4 53841 53804 ( 38 n); score: 0.592 Intron 4 53803 52244 (1560 n); Pd: 0.909 Pa: 0.000 Exon 5 52243 52223 ( 21 n); score: 0.762 Intron 5 52222 51879 ( 344 n); Pd: 0.900 Pa: 0.382 Exon 6 51878 51855 ( 24 n); score: 0.750 PGS (57552 57365,57090 57064,55519 55477,53841 53804,52243 52223,51878 51855) SGN-E238551- PGS (57574 57358) SGN-E298638- PGS (57542 57400) SGN-E352844- 3-phase translation of AGS-1 (-strand): . . . . . . 57574 TTAACTTCTAAAACTCAAAACTTATCATTATCCCCAAAATCTGGAAGTCATCATCACAAG L T S K T Q N L S L S P K S G S H H H K - L L K L K T Y H Y P Q N L E V I I T R N F - N S K L I I I P K I W K S S S Q . . . . . . 57514 AACATCTATCCTCAAATTACTAAATCTAAGAGTATCTAAGAAGCTAAAATAAGTAAAAGA N I Y P Q I T K S K S I - E A K I S K R T S I L K L L N L R V S K K L K - V K E E H L S S N Y - I - E Y L R S - N K - K . . . . . . 57454 GATAGTCCATGTCCGAACTTCAAGACATCAAGACGCGAAGGAAAGAATCCAGTCCGAGCT D S P C P N F K T S R R E G K N P V R A I V H V R T S R H Q D A K E R I Q S E L R - S M S E L Q D I K T R R K E S S P S . . . : . . . : 57394 AGGAACAATATCTCACCCTGAAATCTGATT : TTTGGAAAATAGTTTCTTTAAACCTGA : TAT R N N I S P - N L I : F G K - F L - T - : Y G T I S H P E I - F : L E N S F F K P D : I - E Q Y L T L K S D : F W K I V S L N L : I . . . . : . . 55516 ATTGCATGACATAAGAAACTGGTCACGAACTTTTATAGAA : AACTCAACTAATTTCAATAG I A - H K K L V T N F Y R : K L N - F Q - L H D I R N W S R T F I E : N S T N F N R Y C M T - E T G H E L L - K : T Q L I S I . . : . . : . . 53821 AAAGCAATGTAAATAAAT : AAGGCTCTTTTGAAAATCTTA : TTTATGGATTCAAGGATCATG K A M - I N : K A L L K I L : F M D S R I M K Q C K - I : R L F - K S Y : L W I Q G S - E S N V N K : - G S F E N L : I Y G F K D H . 51857 ATT I D Maximal non-overlapping open reading frames (>= 64 codons): none AGS-2 (55829 55541) SCR (e 0.872) Exon 1 55829 55541 ( 289 n); score: 0.872 PGS (55829 55541) SGN-E211987- 3-phase translation of AGS-2 (-strand): . . . . . . 55829 TGGTTATTCAACAATGTAAAAGTGTTTGCGTTTGACCAAGATGTAACATGTGAACTTAAG W L F N N V K V F A F D Q D V T C E L K G Y S T M - K C L R L T K M - H V N L S V I Q Q C K S V C V - P R C N M - T - . . . . . . 55769 TGCACGGTTTATTTGGTTTGTCACCTTGTTTCTAAGTGATTTTCAATGTTTTTTCTTTTG C T V Y L V C H L V S K - F S M F F L L A R F I W F V T L F L S D F Q C F F F C V H G L F G L S P C F - V I F N V F S F . . . . . . 55709 TGTCAAATCTTAACGGTTAAATTGATAATCGAACCGATAACGATTAAAAGCTGATAAATC C Q I L T V K L I I E P I T I K S - - I V K S - R L N - - S N R - R L K A D K S V S N L N G - I D N R T D N D - K L I N . . . . . . 55649 AATAACCGATAATTCAATATCTTAATGGTTTTATAACGGTTTAGCATCTCCACAAACCGA N N R - F N I L M V L - R F S I S T N R I T D N S I S - W F Y N G L A S P Q T D Q - P I I Q Y L N G F I T V - H L H K P . . . . . 55589 TAACCAATAAGACAACCCGATAAACTTCAAAATCGAATCGAACCGACCG - P I R Q P D K L Q N R I E P T N Q - D N P I N F K I E S N R P I T N K T T R - T S K S N R T D Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-2 (+strand): . . . . . . 55541 CGGTCGGTTCGATTCGATTTTGAAGTTTATCGGGTTGTCTTATTGGTTATCGGTTTGTGG R S V R F D F E V Y R V V L L V I G L W G R F D S I L K F I G L S Y W L S V C G V G S I R F - S L S G C L I G Y R F V . . . . . . 55601 AGATGCTAAACCGTTATAAAACCATTAAGATATTGAATTATCGGTTATTGATTTATCAGC R C - T V I K P L R Y - I I G Y - F I S D A K P L - N H - D I E L S V I D L S A E M L N R Y K T I K I L N Y R L L I Y Q . . . . . . 55661 TTTTAATCGTTATCGGTTCGATTATCAATTTAACCGTTAAGATTTGACACAAAAGAAAAA F - S L S V R L S I - P L R F D T K E K F N R Y R F D Y Q F N R - D L T Q K K K L L I V I G S I I N L T V K I - H K R K . . . . . . 55721 ACATTGAAAATCACTTAGAAACAAGGTGACAAACCAAATAAACCGTGCACTTAAGTTCAC T L K I T - K Q G D K P N K P C T - V H H - K S L R N K V T N Q I N R A L K F T N I E N H L E T R - Q T K - T V H L S S . . . . . 55781 ATGTTACATCTTGGTCAAACGCAAACACTTTTACATTGTTGAATAACCA M L H L G Q T Q T L L H C - I T C Y I L V K R K H F Y I V E - P H V T S W S N A N T F T L L N N Maximal non-overlapping open reading frames (>= 64 codons): none AGS-3 (56621 55937) SCR (e 0.760) Exon 1 56621 55937 ( 685 n); score: 0.760 PGS (56561 55937) SGN-E349296- PGS (56308 55937) SGN-E242274- PGS (56621 56190) SGN-E546548- 3-phase translation of AGS-3 (-strand): . . . . . . 56621 CCATTACAATTACATAATCACATCATGCAAGCATACAATTAAGCATATGTAAGACTTTAC P L Q L H N H I M Q A Y N - A Y V R L Y H Y N Y I I T S C K H T I K H M - D F T I T I T - S H H A S I Q L S I C K T L . . . . . . 56561 AATACTACCCAATACATATCATTCGCTATTAAGAGTTTACTATGAAATAGCATAAACCAT N T T Q Y I S F A I K S L L - N S I N H I L P N T Y H S L L R V Y Y E I A - T I Q Y Y P I H I I R Y - E F T M K - H K P . . . . . . 56501 AACCTACCTCCACCGAAGAATTCGTGATCACGCAAGCTACTCCTCAAGGTCTTTGCTTTC N L P P P K N S - S R K L L L K V F A F T Y L H R R I R D H A S Y S S R S L L S - P T S T E E F V I T Q A T P Q G L C F . . . . . . 56441 CTCTTCATTCTCTCTTCTCTCGCTCGTTCGTCCCTCTCTTTTGTTCTTTCTATTTTTCCT L F I L S S L A R S S L S F V L S I F P S S F S L L S L V R P S L L F F L F F L P L H S L F S R S F V P L F C S F Y F S . . . . . . 56381 TATTCAAACTCTTTTTCTTTTACCCTAATTACCATATAATTAAGTATAAAAGATGGTAAA Y S N S F S F T L I T I - L S I K D G K I Q T L F L L P - L P Y N - V - K M V K L F K L F F F Y P N Y H I I K Y K R W - . . . . . . 56321 AGTAACCCACTATTTATTTCAAGGTTATCACCTTTAACCCCCAAGTAATTGAATTATTAA S N P L F I S R L S P L T P K - L N Y - V T H Y L F Q G Y H L - P P S N - I I N K - P T I Y F K V I T F N P Q V I E L L . . . . . . 56261 CATTAACCCACTAACTTTATAATTATAAGCAGAAATAGTCCAAAACGCCCCTTAAAACAT H - P T N F I I I S R N S P K R P L K H I N P L T L - L - A E I V Q N A P - N I T L T H - L Y N Y K Q K - S K T P L K T . . . . . . 56201 TTAACAGAAATCTGACCCAGTCAAGGTTACGCAGCCTGTGACGGCCCGTCGTGCCTATGA L T E I - P S Q G Y A A C D G P S C L - - Q K S D P V K V T Q P V T A R R A Y D F N R N L T Q S R L R S L - R P V V P M . . . . . . 56141 CGGTCCGTCCTGCTGCTTCCGTCACAAAGTTCAGAGACTGAATTTCATTAAAGGGTCTGT R S V L L L P S Q S S E T E F H - R V C G P S C C F R H K V Q R L N F I K G S V T V R P A A S V T K F R D - I S L K G L . . . . . . 56081 GACGGTCCGTCGTGCCCACGACGGTCCGTCCTGCCATGTCGTCGCGAAGTTCAGAGAGTT D G P S C P R R S V L P C R R E V Q R V T V R R A H D G P S C H V V A K F R E L - R S V V P T T V R P A M S S R S S E S . . . . . . 56021 GTTCTCATTACCCAAATTTTTAGAATCTAAGTGTTTTGGAACGAGACCCCCTCGACGGTC V L I T Q I F R I - V F W N E T P S T V F S L P K F L E S K C F G T R P P R R S C S H Y P N F - N L S V L E R D P L D G . . . 55961 CGTCGTGCCCACGACGGTCCGTCGT R R A H D G P S V V P T T V R R P S C P R R S V Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-9_AGS-3_PPS_1 (56197 55937) (frame '2'; 261 bp, 87 residues) 1 QKSDPVKVTQ PVTARRAYDG PSCCFRHKVQ RLNFIKGSVT VRRAHDGPSC HVVAKFRELF 61 SLPKFLESKC FGTRPPRRSV VPTTVRR 3-phase translation of AGS-3 (+strand): . . . . . . 55937 ACGACGGACCGTCGTGGGCACGACGGACCGTCGAGGGGGTCTCGTTCCAAAACACTTAGA T T D R R G H D G P S R G S R S K T L R R R T V V G T T D R R G G L V P K H L D D G P S W A R R T V E G V S F Q N T - . . . . . . 55997 TTCTAAAAATTTGGGTAATGAGAACAACTCTCTGAACTTCGCGACGACATGGCAGGACGG F - K F G - - E Q L S E L R D D M A G R S K N L G N E N N S L N F A T T W Q D G I L K I W V M R T T L - T S R R H G R T . . . . . . 56057 ACCGTCGTGGGCACGACGGACCGTCACAGACCCTTTAATGAAATTCAGTCTCTGAACTTT T V V G T T D R H R P F N E I Q S L N F P S W A R R T V T D P L M K F S L - T L D R R G H D G P S Q T L - - N S V S E L . . . . . . 56117 GTGACGGAAGCAGCAGGACGGACCGTCATAGGCACGACGGGCCGTCACAGGCTGCGTAAC V T E A A G R T V I G T T G R H R L R N - R K Q Q D G P S - A R R A V T G C V T C D G S S R T D R H R H D G P S Q A A - . . . . . . 56177 CTTGACTGGGTCAGATTTCTGTTAAATGTTTTAAGGGGCGTTTTGGACTATTTCTGCTTA L D W V R F L L N V L R G V L D Y F C L L T G S D F C - M F - G A F W T I S A Y P - L G Q I S V K C F K G R F G L F L L . . . . . . 56237 TAATTATAAAGTTAGTGGGTTAATGTTAATAATTCAATTACTTGGGGGTTAAAGGTGATA - L - S - W V N V N N S I T W G L K V I N Y K V S G L M L I I Q L L G G - R - - I I I K L V G - C - - F N Y L G V K G D . . . . . . 56297 ACCTTGAAATAAATAGTGGGTTACTTTTACCATCTTTTATACTTAATTATATGGTAATTA T L K - I V G Y F Y H L L Y L I I W - L P - N K - W V T F T I F Y T - L Y G N - N L E I N S G L L L P S F I L N Y M V I . . . . . . 56357 GGGTAAAAGAAAAAGAGTTTGAATAAGGAAAAATAGAAAGAACAAAAGAGAGGGACGAAC G - K K K S L N K E K - K E Q K R G T N G K R K R V - I R K N R K N K R E G R T R V K E K E F E - G K I E R T K E R D E . . . . . . 56417 GAGCGAGAGAAGAGAGAATGAAGAGGAAAGCAAAGACCTTGAGGAGTAGCTTGCGTGATC E R E K R E - R G K Q R P - G V A C V I S E R R E N E E E S K D L E E - L A - S R A R E E R M K R K A K T L R S S L R D . . . . . . 56477 ACGAATTCTTCGGTGGAGGTAGGTTATGGTTTATGCTATTTCATAGTAAACTCTTAATAG T N S S V E V G Y G L C Y F I V N S - - R I L R W R - V M V Y A I S - - T L N S H E F F G G G R L W F M L F H S K L L I . . . . . . 56537 CGAATGATATGTATTGGGTAGTATTGTAAAGTCTTACATATGCTTAATTGTATGCTTGCA R M I C I G - Y C K V L H M L N C M L A E - Y V L G S I V K S Y I C L I V C L H A N D M Y W V V L - S L T Y A - L Y A C . . . 56597 TGATGTGATTATGTAATTGTAATGG - C D Y V I V M D V I M - L - W M M - L C N C N Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-9_AGS-3_PPS_1 (56018 56239) (frame '1'; 219 bp, 73 residues) 1 EQLSELRDDM AGRTVVGTTD RHRPFNEIQS LNFVTEAAGR TVIGTTGRHR LRNLDWVRFL 61 LNVLRGVLDY FCL- AGS-4 (57211 56997,56959 56662) SCR (e 0.707 d 0.000 a 0.000,e 0.866) Exon 1 57211 56997 ( 215 n); score: 0.707 Intron 1 56996 56960 ( 37 n); Pd: 0.000 Pa: 0.000 Exon 2 56959 56662 ( 298 n); score: 0.866 PGS (57211 56997,56959 56662) SGN-E242359- PGS (56981 56881) SGN-E347579- 3-phase translation of AGS-4 (-strand): . . . . . . 57211 ATATATCATATAATAACATAAAATCAACTACAATACTCAACAGACAACAACAACAAGTAC I Y H I I T - N Q L Q Y S T D N N N K Y Y I I - - H K I N Y N T Q Q T T T T S T I S Y N N I K S T T I L N R Q Q Q Q V . . . . . . 57151 CATAACCATTGGCCACAACCCAAGCGCATCTATGAGGACTCACTCCTCCACACCATACTC H N H W P Q P K R I Y E D S L L H T I L I T I G H N P S A S M R T H S S T P Y S P - P L A T T Q A H L - G L T P P H H T . . . . . . 57091 GTTTGGAAAATAGTTTCTTTAAACCTGAGTATATAAACATGATTCAAGATTCATTCTTTT V W K I V S L N L S I - T - F K I H S F F G K - F L - T - V Y K H D S R F I L L R L E N S F F K P E Y I N M I Q D S F F . . . . : . . 57031 ACTATCCTGGTGTCGGAACGTGACACTCCGATCCT : CACTACTACTATCCTGGTGTCGGAA T I L V S E R D T P I L : T T T I L V S E L S W C R N V T L R S : S L L L S W C R N Y Y P G V G T - H S D P : H Y Y Y P G V G . . . . . . 56934 CGTGACACCCGATCCATTACTACTATCCTGGTGTCGGAACGTGACACCCGATCCATTACT R D T R S I T T I L V S E R D T R S I T V T P D P L L L S W C R N V T P D P L L T - H P I H Y Y Y P G V G T - H P I H Y . . . . . . 56874 ACTATCCTGGTGTCGGGACGTGATACCCGATCCACTATTACTATCCTGGTGTCGGAACGT T I L V S G R D T R S T I T I L V S E R L S W C R D V I P D P L L L S W C R N V Y Y P G V G T - Y P I H Y Y Y P G V G T . . . . . . 56814 GACACCCGATCCACAATTACTATCCTGGTGTCGGAACGTGACACCCGATTCACTACTACT D T R S T I T I L V S E R D T R F T T T T P D P Q L L S W C R N V T P D S L L L - H P I H N Y Y P G V G T - H P I H Y Y . . . . . . 56754 ATCCTGGTGTCGGAACGTGACACCTGATCCACTAACCTCATTCTTTTAGTTCATCAAGCC I L V S E R D T - S T N L I L L V H Q A S W C R N V T P D P L T S F F - F I K P Y P G V G T - H L I H - P H S F S S S S . . . . 56694 TTCTTTTATACCAAGGCATCATCATTAACACAG F F Y T K A S S L T Q S F I P R H H H - H L L L Y Q G I I I N T Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-9_AGS-4_PPS_1 (57063 56997,56959 56706) (frame '2'; 318 bp, 106 residues) 1 VYKHDSRFIL LLSWCRNVTL RSSLLLSWCR NVTPDPLLLS WCRNVTPDPL LLSWCRDVIP 61 DPLLLSWCRN VTPDPQLLSW CRNVTPDSLL LSWCRNVTPD PLTSFF- AGS-5 (58014 56870,56787 56665) SCR (e 0.818 d 0.000 a 0.000,e 0.886) Exon 1 58014 56870 (1145 n); score: 0.818 Intron 1 56869 56788 ( 82 n); Pd: 0.000 Pa: 0.000 Exon 2 56787 56665 ( 123 n); score: 0.886 PGS (57446 56870,56787 56665) SGN-E241789+ PGS (57553 56856) SGN-E546506+ PGS (57958 57230) SGN-E351546- PGS (57860 57230) SGN-E356696- PGS (57812 57230) SGN-E356206- PGS (57979 57310) SGN-E392027+ PGS (57717 57311) SGN-E370357+ PGS (57600 57322) SGN-E546219+ PGS (57574 57324) SGN-E373117- PGS (57574 57324) SGN-E373116+ PGS (58014 57735) SGN-E355114- 3-phase translation of AGS-5 (-strand): . . . . . . 58014 ACAACCCCAGTGGCTGGCTCAGACGCATCTTGTCTTGCCGGTGTTGGTGTTGGCGCAGTT T T P V A G S D A S C L A G V G V G A V Q P Q W L A Q T H L V L P V L V L A Q L N P S G W L R R I L S C R C W C W R S . . . . . . 57954 GTTGCTCTAGTTCTAACCATCTGTGAAATAGAGTGAAGATGGTCAGATACCAATTTGTAT V A L V L T I C E I E - R W S D T N L Y L L - F - P S V K - S E D G Q I P I C I C C S S S N H L - N R V K M V R Y Q F V . . . . . . 57894 CACCTAGATACCAATTGGATCCAAGTAAAAGCACGAAAGAAGGAAAGAATGGAATTTTCC H L D T N W I Q V K A R K K E R M E F S T - I P I G S K - K H E R R K E W N F P S P R Y Q L D P S K S T K E G K N G I F . . . . . . 57834 TAAAGTCTTATAGCCTCTCAAAGAAAAGTAAAGGCGTCCCCCTACCGTTCCTCAAGACTC - S L I A S Q R K V K A S P Y R S S R L K V L - P L K E K - R R P P T V P Q D S L K S Y S L S K K S K G V P L P F L K T . . . . . . 57774 TACTAGACTTGTTCTTGTGTGATGAGACCAACGAACCTAATGCTCTGATACCAAGTTTGT Y - T C S C V M R P T N L M L - Y Q V C T R L V L V - - D Q R T - C S D T K F V L L D L F L C D E T N E P N A L I P S L . . . . . . 57714 CACGACCCAAAACGGGCCGCGAGTGGCACCCACTCTTACCCTCCTATGTGAGAGAACCAA H D P K R A A S G T H S Y P P M - E N Q T T Q N G P R V A P T L T L L C E R T N S R P K T G R E W H P L L P S Y V R E P . . . . . . 57654 CCAATCTAAACCCCAACAATTCAACGATAATAAATAGAATATAATGCGGAAGAATTAAAA P I - T P T I Q R - - I E Y N A E E L K Q S K P Q Q F N D N K - N I M R K N - N T N L N P N N S T I I N R I - C G R I K . . . . . . 57594 CTCATTAACGAAATCAATAATTAACTTCTAAAACTCAAAACTTATCATTATCCCCAAAAT L I N E I N N - L L K L K T Y H Y P Q N S L T K S I I N F - N S K L I I I P K I T H - R N Q - L T S K T Q N L S L S P K . . . . . . 57534 CTGGAAGTCATCATCACAAGAACATCTATCCTCAAATTACTAAATCTAAGAGTATCTAAG L E V I I T R T S I L K L L N L R V S K W K S S S Q E H L S S N Y - I - E Y L R S G S H H H K N I Y P Q I T K S K S I - . . . . . . 57474 AAGCTAAAATAAGTAAAAGAGATAGTCCATGTCCGAACTTCAAGACATCAAGACGCGAAG K L K - V K E I V H V R T S R H Q D A K S - N K - K R - S M S E L Q D I K T R R E A K I S K R D S P C P N F K T S R R E . . . . . . 57414 GAAAGAATCCAGTCCGAGCTAGGAACAATATCTCACCCTGAAATCTGATTATGCTGAAGT E R I Q S E L G T I S H P E I - L C - S K E S S P S - E Q Y L T L K S D Y A E V G K N P V R A R N N I S P - N L I M L K . . . . . . 57354 CTGGCTAGAGTTGCGGTTGAGTCAAAGTCGATGGCACGTTTGCTGCACTCCACAAATAAC L A R V A V E S K S M A R L L H S T N N W L E L R L S Q S R W H V C C T P Q I T S G - S C G - V K V D G T F A A L H K - . . . . . . 57294 AAGAAAGAAACATACAAGTAGGGGTCAGTACAAGGCACAAGTACTGAGTAGGTATCATCG K K E T Y K - G S V Q G T S T E - V S S R K K H T S R G Q Y K A Q V L S R Y H R Q E R N I Q V G V S T R H K Y - V G I I . . . . . . 57234 GCCAACTCAAAATAGAAAACAACATATATCATATAATAACATAAAATCAACTACAATACT A N S K - K T T Y I I - - H K I N Y N T P T Q N R K Q H I S Y N N I K S T T I L G Q L K I E N N I Y H I I T - N Q L Q Y . . . . . . 57174 CAACAGACAACAACAACAAGTACCATAACCATTGGCCACAACCCAAGCGCATCTATGAGG Q Q T T T T S T I T I G H N P S A S M R N R Q Q Q Q V P - P L A T T Q A H L - G S T D N N N K Y H N H W P Q P K R I Y E . . . . . . 57114 ACTCACTCCTCCACACCATACTCGTTTGGAAAATAGTTTCTTTAAACCTGAGTATATAAA T H S S T P Y S F G K - F L - T - V Y K L T P P H H T R L E N S F F K P E Y I N D S L L H T I L V W K I V S L N L S I - . . . . . . 57054 CATGATTCAAGATTCATTCTTTTACTATCCTGGTGTCGGAACGTGACACTCCGATCCTTT H D S R F I L L L S W C R N V T L R S F M I Q D S F F Y Y P G V G T - H S D P L T - F K I H S F T I L V S E R D T P I L . . . . . . 56994 ACTACTATCCTGATGTCGGAACGTGACACCCGATCCACTACTACTATCCTGGTGTCGGAA T T I L M S E R D T R S T T T I L V S E L L S - C R N V T P D P L L L S W C R N Y Y Y P D V G T - H P I H Y Y Y P G V G . . . . . . 56934 CGTGACACCCGATCCATTACTACTATCCTGGTGTCGGAACGTGACACCCGATCCATTACT R D T R S I T T I L V S E R D T R S I T V T P D P L L L S W C R N V T P D P L L T - H P I H Y Y Y P G V G T - H P I H Y . : . . . . . 56874 ACTAT : GTGTCGGAACGTGACACCCGATTCACTACTACTATCCTGGTGTCGGAACGTGACA T M : C R N V T P D S L L L S W C R N V T L : C V G T - H P I H Y Y Y P G V G T - H Y Y : V S E R D T R F T T T I L V S E R D . . . . . . 56732 CCTGATCCACTAACCTCATTCTTTTAGTTCATCAAGCCTTCTTTTATACCAAGGCATCAT P D P L T S F F - F I K P S F I P R H H L I H - P H S F S S S S L L L Y Q G I I T - S T N L I L L V H Q A F F Y T K A S . 56672 CATTAACA H - I N S L T Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-9_AGS-5_PPS_1 (57928 57611) (frame '0'; 315 bp, 105 residues) 1 NRVKMVRYQF VSPRYQLDPS KSTKEGKNGI FLKSYSLSKK SKGVPLPFLK TLLDLFLCDE 61 TNEPNALIPS LSRPKTGREW HPLLPSYVRE PTNLNPNNST IINRI- >C08HBa0294K15.1-_PGL-9_AGS-5_PPS_2 (57063 56870,56787 56706) (frame '1'; 273 bp, 91 residues) 1 VYKHDSRFIL LLSWCRNVTL RSFTTILMSE RDTRSTTTIL VSERDTRSIT TILVSERDTR 61 SITTMCRNVT PDSLLLSWCR NVTPDPLTSF F- >C08HBa0294K15.1-_PGL-9_AGS-5_PPS_3 (57392 57147) (frame '2'; 243 bp, 81 residues) 1 EQYLTLKSDY AEVWLELRLS QSRWHVCCTP QITRKKHTSR GQYKAQVLSR YHRPTQNRKQ 61 HISYNNIKST TILNRQQQQV P- AGS-6 (60766 59666,58887 58026) SCR (e 0.890 d 0.000 a 0.000,e 0.862) Exon 1 60766 59666 (1101 n); score: 0.890 Intron 1 59665 58888 ( 778 n); Pd: 0.000 Pa: 0.000 Exon 2 58887 58026 ( 862 n); score: 0.862 PGS (58174 58026) SGN-E368761- PGS (58643 58090) SGN-E329287- PGS (58813 58095) SGN-E356614+ PGS (58810 58147) SGN-E352401+ PGS (60141 59666,58887 58717) SGN-E353359+ PGS (60696 60018) SGN-E368762+ PGS (60766 60055) SGN-E379315+ PGS (60766 60172) SGN-E375319+ PGS (60383 60232) SGN-E578078+ PGS (60766 60242) SGN-E204434+ PGS (60696 60338) SGN-E240817+ 3-phase translation of AGS-6 (-strand): . . . . . . 60766 AATCCCTCGATAAATCGATGGTAGTAGCTAGCTAAACCAACAAAGCTACTTACCTCTGTA N P S I N R W - - L A K P T K L L T S V I P R - I D G S S - L N Q Q S Y L P L - S L D K S M V V A S - T N K A T Y L C . . . . . . 60706 ACATTAGTAGGTCTTTCCCAACTCTTCACTGCTTCGATCTTAGAAGGATCCACAATCACT T L V G L S Q L F T A S I L E G S T I T H - - V F P N S S L L R S - K D P Q S L N I S R S F P T L H C F D L R R I H N H . . . . . . 60646 CCATCCTTAGAAACCACATGCCCCAAGAAGGACACTGAATCTAGCCAAAACTCACACTTG P S L E T T C P K K D T E S S Q N S H L H P - K P H A P R R T L N L A K T H T W S I L R N H M P Q E G H - I - P K L T L . . . . . . 60586 GAGAATTTGGCATTAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAGTGCTCC E N L A L S F F S L N I S N T I L K C S R I W H - A F S P S T F P I P F S S A P G E F G I K L F L P Q H F Q Y H S Q V L . . . . . . 60526 TCATGTTCTTTCTTGCTCTTTGAGTATACCAGTATATCATCAACGAATACAATGACAAAG S C S F L L F E Y T S I S S T N T M T K H V L S C S L S I P V Y H Q R I Q - Q R L M F F L A L - V Y Q Y I I N E Y N D K . . . . . . 60466 AGATCTAGATATGGATTAAAGATTCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTC R S R Y G L K I P F I K L M N A A G A F D L D M D - R F R S S S S - T Q Q G H S E I - I W I K D S V H Q A H E R S R G I . . . . . . 60406 GTAAGCCCAAAAGACATTACTAAGAACTCGTAATACCCATATCTTGTTCGAAAAGCAGTC V S P K D I T K N S - Y P Y L V R K A V - A Q K T L L R T R N T H I L F E K Q S R K P K R H Y - E L V I P I S C S K S S . . . . . . 60346 TTGGGCACATTCGTTGCCCATATTTTCAATTGATGATAACCAGATCTCAAATCAATTTTT L G T F V A H I F N - - - P D L K S I F W A H S L P I F S I D D N Q I S N Q F L L G H I R C P Y F Q L M I T R S Q I N F . . . . . . 60286 GAGAAGGTACAAGCACCTTGTAACTGATCGAACAAATCATCGATGTGAGGAAGAGGATAC E K V Q A P C N - S N K S S M - G R G Y R R Y K H L V T D R T N H R C E E E D T - E G T S T L - L I E Q I I D V R K R I . . . . . . 60226 TTGTTCTTAACAGTTACCTTATTCAGTTGTCTGTAGTCAATGCACATCCGAAAACTTCCA L F L T V T L F S C L - S M H I R K L P C S - Q L P Y S V V C S Q C T S E N F H L V L N S Y L I Q L S V V N A H P K T S . . . . . . 60166 TCCTTCTTCTTCACAAACAAAACAGGAGTACCCCAAGGGGATGCACTTGGTCTAATAAAA S F F F T N K T G V P Q G D A L G L I K P S S S Q T K Q E Y P K G M H L V - - N I L L L H K Q N R S T P R G C T W S N K . . . . . . 60106 CCTTTCCCTAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCAGCGGGAGCCATT P F P N N S - S W A F N S L N S A G A I L S L T T L E V G P L T L L T Q R E P F T F P - Q L L K L G L - L S - L S G S H . . . . . . 60046 CTATAAGGGGGTATGGAAATGGGGCGAGTACCCGGCTCCAGATCAATACAGAAATCAATA L - G G M E M G R V P G S R S I Q K S I Y K G V W K W G E Y P A P D Q Y R N Q Y S I R G Y G N G A S T R L Q I N T E I N . . . . . . 59986 TCTCTATCTGGTGGCATACCAGAAAGGTCTGCAGGAAACACATCCAAAAACTCACGGACT S L S G G I P E R S A G N T S K N S R T L Y L V A Y Q K G L Q E T H P K T H G L I S I W W H T R K V C R K H I Q K L T D . . . . . . 59926 ATCGAAACCGACTCAATTGAAGGTACTTGGGTAGTATCATCCCTGAGGTGTGCCAAGAAA I E T D S I E G T W V V S S L R C A K K S K P T Q L K V L G - Y H P - G V P R K Y R N R L N - R Y L G S I I P E V C Q E . . . . . . 59866 GCTAAACACCCTTTACTAACCATTCTCTTAGCACGAAGAAATGAGATGATACGAACTGGA A K H P L L T I L L A R R N E M I R T G L N T L Y - P F S - H E E M R - Y E L E S - T P F T N H S L S T K K - D D T N W . . . . . . 59806 GTGGGAGTGTAGTCACCCTCCCACACTAACGGATCTGTCTCAGGCTTGGCCAATGTCACA V G V - S P S H T N G S V S G L A N V T W E C S H P P T L T D L S Q A W P M S Q S G S V V T L P H - R I C L R L G Q C H . . . . . . 59746 GTTTTGGCATTACAGTCTAAGATTGCAAAGTTTGGAGAAAGCCAAGTCATACCCAGAATT V L A L Q S K I A K F G E S Q V I P R I F W H Y S L R L Q S L E K A K S Y P E L S F G I T V - D C K V W R K P S H T Q N . . . : . . . 59686 ACATCGAAATCAACCATTTCT : TAAAAGGATTTTGCTGCAGTAGATACCTGTAAGGCTGGA T S K S T I S : - K D F A A V D T C K A G H R N Q P F L : K R I L L Q - I P V R L E Y I E I N H F : L K G F C C S R Y L - G W . . . . . . 58848 ATCTGCAAATCTGACCTCAATCCCTTCACAAAATGGCGAATCCGCTCTTGTGGACTGAAG I C K S D L N P F T K W R I R S C G L K S A N L T S I P S Q N G E S A L V D - S N L Q I - P Q S L H K M A N P L L W T E . . . . . . 58788 CAAAGCTGGGTGGCATACCTAGATAATGCACGACACTTAGCCTCATACGCAGTAACCGAC Q S W V A Y L D N A R H L A S Y A V T D K A G W H T - I M H D T - P H T Q - P T A K L G G I P R - C T T L S L I R S N R . . . . . . 58728 ATCCTGCCTTGCTCTAGGCTCAAGAACTCATCTCTACTCCTATCCCTCTAAGTCCGGGGT I L P C S R L K N S S L L L S L - V R G S C L A L G S R T H L Y S Y P S K S G V H P A L L - A Q E L I S T P I P L S P G . . . . . . 58668 ATATACTTCTCCATAAACAAGCTAGAGAATGATGCCCAAGTCATAGGCGGTGCCTGTGCT I Y F S I N K L E N D A Q V I G G A C A Y T S P - T S - R M M P K S - A V P V L Y I L L H K Q A R E - C P S H R R C L C . . . . . . 58608 GGTTGACACTCGACATACGATCGCCACCACATTTTGGAATTTCCCTGAAACTTATAGGTT G - H S T Y D R H H I L E F P - N L - V V D T R H T I A T T F W N F P E T Y R L W L T L D I R S P P H F G I S L K L I G . . . . . . 58548 ACAAACTCAACACCGAATCGTTCCACTATGCCCATCTTATGTAGAAACTCATGACAATCA T N S T P N R S T M P I L C R N S - Q S Q T Q H R I V P L C P S Y V E T H D N Q Y K L N T E S F H Y A H L M - K L M T I . . . . . . 58488 ACCACAAAATCATAGGCATCCTCAGATTCAGCACCCTTGAAGACTGGAGGTTTCAATTTC T T K S - A S S D S A P L K T G G F N F P Q N H R H P Q I Q H P - R L E V S I S N H K I I G I L R F S T L E D W R F Q F . . . . . . 58428 AAGAACTTATTGAAAAGTTCGTGCTGATCACTTGTCATTATAGGTCCTGTAGTCAATCGA K N L L K S S C - S L V I I G P V V N R R T Y - K V R A D H L S L - V L - S I E Q E L I E K F V L I T C H Y R S C S Q S . . . . . . 58368 GGAAACGTGCCTATTTCCAATGAGGCATCCATGCGGGGAGCCATAGCAGCTGCATGTTGT G N V P I S N E A S M R G A I A A A C C E T C L F P M R H P C G E P - Q L H V V R K R A Y F Q - G I H A G S H S S C M L . . . . . . 58308 ACTCCCGAAACCTGAGGCGTTGGTGCAGAAAACACTGGAGGTGTCTGGCCTTGATCAGAT T P E T - G V G A E N T G G V W P - S D L P K P E A L V Q K T L E V S G L D Q I Y S R N L R R W C R K H W R C L A L I R . . . . . . 58248 AACCCGCTAAGATAAGCAAGAACCTGGTTAATCATCTCTGGGGTAGGTTGGGGTGGTAAT N P L R - A R T W L I I S G V G W G G N T R - D K Q E P G - S S L G - V G V V I - P A K I S K N L V N H L W G R L G W - . . . . . . 58188 TCCTCATTCTGCACTTGTTCATCCTCCCCTTCCTCACCCTCTCTTACTACTTCCTCAGTC S S F C T C S S S P S S P S L T T S S V P H S A L V H P P L P H P L L L L P Q S F L I L H L F I L P F L T L S Y Y F L S . . . . . . 58128 GGTGGAGGAGTCACCGCCCTAGTACTAGATGGGCCAGGTGCTTGTCCTCTTCCTCTAGAG G G G V T A L V L D G P G A C P L P L E V E E S P P - Y - M G Q V L V L F L - R R W R S H R P S T R W A R C L S S S S R . . . . . 58068 GACGTCCTCCCGCGACCTCTACCACGGCCTCTTGCCACTGCTC D V L P R P L P R P L A T A T S S R D L Y H G L L P L L G R P P A T S T T A S C H C Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-9_AGS-6_PPS_1 (60739 60374) (frame '1'; 363 bp, 121 residues) 1 LAKPTKLLTS VTLVGLSQLF TASILEGSTI TPSLETTCPK KDTESSQNSH LENLALSFFS 61 LNISNTILKC SSCSFLLFEY TSISSTNTMT KRSRYGLKIP FIKLMNAAGA FVSPKDITKN 121 S- >C08HBa0294K15.1-_PGL-9_AGS-6_PPS_2 (60040 59795) (frame '1'; 243 bp, 81 residues) 1 GGMEMGRVPG SRSIQKSISL SGGIPERSAG NTSKNSRTIE TDSIEGTWVV SSLRCAKKAK 61 HPLLTILLAR RNEMIRTGVG V- >C08HBa0294K15.1-_PGL-9_AGS-6_PPS_3 (58233 58027) (frame '1'; 207 bp, 69 residues) 1 ARTWLIISGV GWGGNSSFCT CSSSPSSPSL TTSSVGGGVT ALVLDGPGAC PLPLEDVLPR 61 PLPRPLATA >C08HBa0294K15.1-_PGL-9_AGS-6_PPS_4 (58884 58678) (frame '1'; 204 bp, 68 residues) 1 KDFAAVDTCK AGICKSDLNP FTKWRIRSCG LKQSWVAYLD NARHLASYAV TDILPCSRLK 61 NSSLLLSL- AGS-7 (60247 59130,59093 58769) SCR (e 0.869 d 0.000 a 0.000,e 0.785) Exon 1 60247 59130 (1118 n); score: 0.869 Intron 1 59129 59094 ( 36 n); Pd: 0.000 Pa: 0.000 Exon 2 59093 58769 ( 325 n); score: 0.785 PGS (59564 59130,59093 58769) SGN-E214046+ PGS (59568 59130,59093 58976) SGN-E244046+ PGS (59950 59409) SGN-E355026+ PGS (60178 59417) SGN-E355244+ PGS (59775 59445) SGN-E352716+ PGS (60135 59475) SGN-E352117- PGS (60178 59518) SGN-E351414+ PGS (60247 59589) SGN-E355232+ 3-phase translation of AGS-7 (-strand): . . . . . . 60247 TCGATGTGAGGAAGAGGATACTTGTTCTTAACAGTTACCTTATTCAGTTGTCTGTAGTCA S M - G R G Y L F L T V T L F S C L - S R C E E E D T C S - Q L P Y S V V C S Q D V R K R I L V L N S Y L I Q L S V V . . . . . . 60187 ATGCACATCCGAAAACTTCCATCCTTCTTCTTCACAAACAAAACAGGAGTACCCCAAGGG M H I R K L P S F F F T N K T G V P Q G C T S E N F H P S S S Q T K Q E Y P K G N A H P K T S I L L L H K Q N R S T P R . . . . . . 60127 GATGCACTTGGTCTAATAAAACCTTTCCCTAACAACTCTTGAAGTTGGGCCTTTAACTCT D A L G L I K P F P N N S - S W A F N S M H L V - - N L S L T T L E V G P L T L G C T W S N K T F P - Q L L K L G L - L . . . . . . 60067 CTTAACTCAGCGGGAGCCATTCTATAAGGGGGTATGGAAATGGGGCGAGTACCCGGCTCC L N S A G A I L - G G M E M G R V P G S L T Q R E P F Y K G V W K W G E Y P A P S - L S G S H S I R G Y G N G A S T R L . . . . . . 60007 AGATCAATACAGAAATCAATATCTCTATCTGGTGGCATACCAGAAAGGTCTGCAGGAAAC R S I Q K S I S L S G G I P E R S A G N D Q Y R N Q Y L Y L V A Y Q K G L Q E T Q I N T E I N I S I W W H T R K V C R K . . . . . . 59947 ACATCCAAAAACTCACGGACTATCGAAACCGACTCAATTGAAGGTACTTGGGTAGTATCA T S K N S R T I E T D S I E G T W V V S H P K T H G L S K P T Q L K V L G - Y H H I Q K L T D Y R N R L N - R Y L G S I . . . . . . 59887 TCCCTGAGGTGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTCTCTTAGCACGAAGA S L R C A K K A K H P L L T I L L A R R P - G V P R K L N T L Y - P F S - H E E I P E V C Q E S - T P F T N H S L S T K . . . . . . 59827 AATGAGATGATACGAACTGGAGTGGGAGTGTAGTCACCCTCCCACACTAACGGATCTGTC N E M I R T G V G V - S P S H T N G S V M R - Y E L E W E C S H P P T L T D L S K - D D T N W S G S V V T L P H - R I C . . . . . . 59767 TCAGGCTTGGCCAATGTCACAGTTTTGGCATTACAGTCTAAGATTGCAAAGTTTGGAGAA S G L A N V T V L A L Q S K I A K F G E Q A W P M S Q F W H Y S L R L Q S L E K L R L G Q C H S F G I T V - D C K V W R . . . . . . 59707 AGCCAAGTCATACCCAGAATTACATCGAAATCAACCATTTCTAAGATAACCAAGTCTACA S Q V I P R I T S K S T I S K I T K S T A K S Y P E L H R N Q P F L R - P S L H K P S H T Q N Y I E I N H F - D N Q V Y . . . . . . 59647 TGAGTATTACTCCCCATAAAAGTCACAAGACAAGACCTATACACCTTTTCAACTATCACA - V L L P I K V T R Q D L Y T F S T I T E Y Y S P - K S Q D K T Y T P F Q L S Q M S I T P H K S H K T R P I H L F N Y H . . . . . . 59587 GACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCACAATGTAAATTA D S P T G V E T R I G M S S N S Q C K L T H P P E - K H E - A C Q A I H N V N - R L T H R S R N T N R H V K Q F T M - I . . . . . . 59527 AGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCAGGATCAAATAATACA R P V A N E E D T Y E N V D P G S N N T D Q - Q M R K I H M K M W I Q D Q I I Q K T S S K - G R Y I - K C G S R I K - Y . . . . . . 59467 GAAGCCATGCAATCACAAACCAAAAGATTACCTGTGATAACAACATCAGATGTCTCCGCT E A M Q S Q T K R L P V I T T S D V S A K P C N H K P K D Y L - - Q H Q M S P L R S H A I T N Q K I T C D N N I R C L R . . . . . . 59407 TCAGACCTCCCAGGGAAAGCATAACAATGGGCCCTATCACCTGTCTATCCGTTGCCCCTA S D L P G K A - Q W A L S P V Y P L P L Q T S Q G K H N N G P Y H L S I R C P Y F R P P R E S I T M G P I T C L S V A P . . . . . . 59347 CCATGTTGTGCTGCAGTCGCTCCGGCTTGTCCGCCACCCCGGTTGATTTGTGTGACCACC P C C A A V A P A C P P P R L I C V T T H V V L Q S L R L V R H P G - F V - P P T M L C C S R S G L S A T P V D L C D H . . . . . . 59287 ATTACCTCGGCCACCATGTTCTCCAGAATAGCGGCCTCTTCCATGACCACCTCTACCCCT I T S A T M F S R I A A S S M T T S T P L P R P P C S P E - R P L P - P P L P L H Y L G H H V L Q N S G L F H D H L Y P . . . . . . 59227 GACTATTGAAGGTCTGTAACTCTGTTTTGGACAATATCTCTTAATATGTCCAATTTCCCC D Y - R S V T L F W T I S L N M S N F P T I E G L - L C F G Q Y L L I C P I S P - L L K V C N S V L D N I S - Y V Q F P . . . . : . . 59167 ACATCCATAACACTCTCTGGGTTCGAGCATAGGTCTCT : CAGAGAAATGTTGACCGGTCTG T S I T L S G F E H R S L : R E M L T G L H P - H S L G S S I G L : S E K C - P V C H I H N T L W V R A - V S : Q R N V D R S . . . . . . 59071 TGGACCCCCAGCTACAGCCTGTAGTGAAGACTGAATAGGTCGGGCTGGATACCCTCCTGA W T P S Y S L - - R L N R S G W I P S - G P P A T A C S E D - I G R A G Y P P E V D P Q L Q P V V K T E - V G L D T L L . . . . . . 59011 ACTCTGCCCTCTGGAGTAAGAACTACTAAACTCACCTCCCTTACGAAACTTCTTAGTTGT T L P S G V R T T K L T S L T K L L S C L C P L E - E L L N S P P L R N F L V V N S A L W S K N Y - T H L P Y E T S - L . . . . . . 58951 TGATGCCATGGTGAAATCATCTGGCTTCACTCCCTCCACCTCTATCACAAAGTCTACCAC - C H G E I I W L H S L H L Y H K V Y H D A M V K S S G F T P S T S I T K S T T L M P W - N H L A S L P P P L S Q S L P . . . . . . 58891 TTCCTAAAAGGATTTTGCTGCAGTAGATACCTGTAAGGCTGGAATCTGCAAATCTGACCT F L K G F C C S R Y L - G W N L Q I - P S - K D F A A V D T C K A G I C K S D L L P K R I L L Q - I P V R L E S A N L T . . . . . . 58831 CAATCCCTTCACAAAATGGCGAATCCGCTCTTGTGGACTGAAGCAAAGCTGGGTGGCATA Q S L H K M A N P L L W T E A K L G G I N P F T K W R I R S C G L K Q S W V A Y S I P S Q N G E S A L V D - S K A G W H . 58771 CCT P T Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-9_AGS-7_PPS_1 (59644 59384) (frame '1'; 258 bp, 86 residues) 1 VLLPIKVTRQ DLYTFSTITD SPTGVETRIG MSSNSQCKLR PVANEEDTYE NVDPGSNNTE 61 AMQSQTKRLP VITTSDVSAS DLPGKA- >C08HBa0294K15.1-_PGL-9_AGS-7_PPS_3 (60040 59795) (frame '1'; 243 bp, 81 residues) 1 GGMEMGRVPG SRSIQKSISL SGGIPERSAG NTSKNSRTIE TDSIEGTWVV SSLRCAKKAK 61 HPLLTILLAR RNEMIRTGVG V- >C08HBa0294K15.1-_PGL-9_AGS-7_PPS_2 (59471 59226) (frame '0'; 243 bp, 81 residues) 1 YRSHAITNQK ITCDNNIRCL RFRPPRESIT MGPITCLSVA PTMLCCSRSG LSATPVDLCD 61 HHYLGHHVLQ NSGLFHDHLY P- AGS-8 (59586 59557,59521 59130,59093 58958) SCR (e 0.633 d 0.922 a 0.000,e 0.844 d 0.000 a 0.000,e 0.776) Exon 1 59586 59557 ( 30 n); score: 0.633 Intron 1 59556 59522 ( 35 n); Pd: 0.922 Pa: 0.000 Exon 2 59521 59130 ( 392 n); score: 0.844 Intron 2 59129 59094 ( 36 n); Pd: 0.000 Pa: 0.000 Exon 3 59093 58958 ( 136 n); score: 0.776 PGS (59586 59557,59521 59130,59093 58958) SGN-E577713+ 3-phase translation of AGS-8 (-strand): . . . : . . . 59586 ACTCACCCACCGGAGTAGAAACACGAATAG : GTAGCAAATGAGGAAGATACATATGAAAAT T H P P E - K H E - : V A N E E D T Y E N L T H R S R N T N R : - Q M R K I H M K M S P T G V E T R I : G S K - G R Y I - K . . . . . . 59491 GTGGATCCAGGATCAAATAATACAGAAGCCATGCAATCACAAACCAAAAGATTACCTGTG V D P G S N N T E A M Q S Q T K R L P V W I Q D Q I I Q K P C N H K P K D Y L - C G S R I K - Y R S H A I T N Q K I T C . . . . . . 59431 ATAACAACATCAGATGTCTCCGCTTCAGACCTCCCAGGGAAAGCATAACAATGGGCCCTA I T T S D V S A S D L P G K A - Q W A L - Q H Q M S P L Q T S Q G K H N N G P Y D N N I R C L R F R P P R E S I T M G P . . . . . . 59371 TCACCTGTCTATCCGTTGCCCCTACCATGTTGTGCTGCAGTCGCTCCGGCTTGTCCGCCA S P V Y P L P L P C C A A V A P A C P P H L S I R C P Y H V V L Q S L R L V R H I T C L S V A P T M L C C S R S G L S A . . . . . . 59311 CCCCGGTTGATTTGTGTGACCACCATTACCTCGGCCACCATGTTCTCCAGAATAGCGGCC P R L I C V T T I T S A T M F S R I A A P G - F V - P P L P R P P C S P E - R P T P V D L C D H H Y L G H H V L Q N S G . . . . . . 59251 TCTTCCATGACCACCTCTACCCCTGACTATTGAAGGTCTGTAACTCTGTTTTGGACAATA S S M T T S T P D Y - R S V T L F W T I L P - P P L P L T I E G L - L C F G Q Y L F H D H L Y P - L L K V C N S V L D N . . . . . . 59191 TCTCTTAATATGTCCAATTTCCCCACATCCATAACACTCTCTGGGTTCGAGCATAGGTCT S L N M S N F P T S I T L S G F E H R S L L I C P I S P H P - H S L G S S I G L I S - Y V Q F P H I H N T L W V R A - V . : . . . . . 59131 CT : CAGAGAAATGTTGACCGGTCTGTGGACCCCCAGCTACAGCCTGTAGTGAAGACTGAAT L : R E M L T G L W T P S Y S L - - R L N : S E K C - P V C G P P A T A C S E D - I S : Q R N V D R S V D P Q L Q P V V K T E . . . . . . 59035 AGGTCGGGCTGGATACCCTCCTGAACTCTGCCCTCTGGAGTAAGAACTACTAAACTCACC R S G W I P S - T L P S G V R T T K L T G R A G Y P P E L C P L E - E L L N S P - V G L D T L L N S A L W S K N Y - T H . . 58975 TCCCTTACGAAACTTCTT S L T K L L P L R N F L P Y E T S Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-9_AGS-8_PPS_1 (59471 59226) (frame '0'; 243 bp, 81 residues) 1 YRSHAITNQK ITCDNNIRCL RFRPPRESIT MGPITCLSVA PTMLCCSRSG LSATPVDLCD 61 HHYLGHHVLQ NSGLFHDHLY P- AGS-9 (62026 60996) SCR (e 0.942) Exon 1 62026 60996 (1031 n); score: 0.942 PGS (61581 60996) SGN-E352950+ PGS (61581 60996) SGN-E357100+ PGS (61581 61028) SGN-E352647+ PGS (62026 61485) SGN-E353207+ PGS (61996 61698) SGN-E578131+ 3-phase translation of AGS-9 (-strand): . . . . . . 62026 TCAGCATGCAATGTTTTCCAAAACATAGAAGTAAACTGCGTACCCCTATTTGATATAATG S A C N V F Q N I E V N C V P L F D I M Q H A M F S K T - K - T A Y P Y L I - W S M Q C F P K H R S K L R T P I - Y N . . . . . . 61966 GAAAGTGGAACTCCATGCAATCGAACAATTTCTGAGATGTAAAGTTTGGCCAACTTCTCT E S G T P C N R T I S E M - S L A N F S K V E L H A I E Q F L R C K V W P T S L G K W N S M Q S N N F - D V K F G Q L L . . . . . . 61906 GCATTATAAGTCACCTTGACCGGAATGAAATGAGCAGACTTAGTTAATTTGTCAACAATT A L - V T L T G M K - A D L V N L S T I H Y K S P - P E - N E Q T - L I C Q Q L C I I S H L D R N E M S R L S - F V N N . . . . . . 61846 ACCCAAATGGAGTCATACTTACCCATTGTCTTTGGAAGACCAACCACGAAGTCCATTGCA T Q M E S Y L P I V F G R P T T K S I A P K W S H T Y P L S L E D Q P R S P L Q Y P N G V I L T H C L W K T N H E V H C . . . . . . 61786 ATTCTCTCCCACTTCCATTCAGGAATGGACATTCTCTGAAGTGTCCCTCCAGGCCTCTGG I L S H F H S G M D I L - S V P P G L W F S P T S I Q E W T F S E V S L Q A S G N S L P L P F R N G H S L K C P S R P L . . . . . . 61726 TGTTCATACTTTACTTGCTGACAATTCGGGCATTGAGCAACAAAATCAACAATGTCACGC C S Y F T C - Q F G H - A T K S T M S R V H T L L A D N S G I E Q Q N Q Q C H A V F I L Y L L T I R A L S N K I N N V T . . . . . . 61666 TTCATCCTACTCCACAAAAAATGTTGCTTTAGATCACGATACATCTTGGTTGCACCAGGA F I L L H K K C C F R S R Y I L V A P G S S Y S T K N V A L D H D T S W L H Q D L H P T P Q K M L L - I T I H L G C T R . . . . . . 61606 TGTATAGAATACCTTGAACTATGAGCCTTTGTAAGAATAGTGTGAATCAAATCATCGACA C I E Y L E L - A F V R I V - I K S S T V - N T L N Y E P L - E - C E S N H R H M Y R I P - T M S L C K N S V N Q I I D . . . . . . 61546 CGGGGTACACATACCCTTCCCTTAATTCTCAAAACACCTTCCTCATCGATTTTTGCTTCT R G T H T L P L I L K T P S S S I F A S G V H I P F P - F S K H L P H R F L L L T G Y T Y P S L N S Q N T F L I D F C F . . . . . . 61486 TTAGCCTCTCCTCGCAACACCTTATCTCGGATCCGGATCAGTTTCTCATCGGTAAACTGT L A S P R N T L S R I R I S F S S V N C - P L L A T P Y L G S G S V S H R - T V F S L S S Q H L I S D P D Q F L I G K L . . . . . . 61426 TTTCCTTTAATCTTATCAAGAAAGGAAGATCTTGCCTCCACACAGGCCAAAAATCCTCCC F P L I L S R K E D L A S T Q A K N P P F L - S Y Q E R K I L P P H R P K I L P F S F N L I K K G R S C L H T G Q K S S . . . . . . 61366 TTCCCATTTACTTCTAGCCTCATAAAGTCATTAGCCAGAGTCTGAACCTCTCTAGCCAAT F P F T S S L I K S L A R V - T S L A N S H L L L A S - S H - P E S E P L - P M L P I Y F - P H K V I S Q S L N L S S Q . . . . . . 61306 GGGCGTCTAGAAACCTGCAAGTGGGCTAGACTTCCCATGCTCCCTGCCTTTCTACTTAAA G R L E T C K W A R L P M L P A F L L K G V - K P A S G L D F P C S L P F Y L K W A S R N L Q V G - T S H A P C L S T - . . . . . . 61246 GCATCTGCCACAACATTAGCTTTTCCCGGATGATACAAAATAGTGATATCATAGTCCTTC A S A T T L A F P G - Y K I V I S - S F H L P Q H - L F P D D T K - - Y H S P S S I C H N I S F S R M I Q N S D I I V L . . . . . . 61186 AGTAGTTCCATCCACCTTCTCTGTCTCAAATTCAAATCTTTCTAAGTAAAGACATACAGT S S S I H L L C L K F K S F - V K T Y S V V P S T F S V S N S N L S K - R H T V Q - F H P P S L S Q I Q I F L S K D I Q . . . . . . 61126 AAACTACGATGATCCGTATAGACTTCACACTTAACCCCATATAGATAATGTCTCTATTGC K L R - S V - T S H L T P Y R - C L Y C N Y D D P Y R L H T - P H I D N V S I A - T T M I R I D F T L N P I - I M S L L . . . . . . 61066 TTTAATGCAAACACTACCGCAGCCAACTCCCAATCATGGGTCGGATAATTACGTTCATGC F N A N T T A A N S Q S W V G - L R S C L M Q T L P Q P T P N H G S D N Y V H A L - C K H Y R S Q L P I M G R I I T F M . . 61006 ACCTTTAATTG T F N P L I H L - L Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1-_PGL-9_AGS-9_PPS_1 (61863 61600) (frame '2'; 261 bp, 87 residues) 1 LICQQLPKWS HTYPLSLEDQ PRSPLQFSPT SIQEWTFSEV SLQASGVHTL LADNSGIEQQ 61 NQQCHASSYS TKNVALDHDT SWLHQDV- >C08HBa0294K15.1-_PGL-9_AGS-9_PPS_3 (61589 61350) (frame '0'; 237 bp, 79 residues) 1 TMSLCKNSVN QIIDTGYTYP SLNSQNTFLI DFCFFSLSSQ HLISDPDQFL IGKLFSFNLI 61 KKGRSCLHTG QKSSLPIYF- >C08HBa0294K15.1-_PGL-9_AGS-9_PPS_2 (61561 61322) (frame '1'; 237 bp, 79 residues) 1 IKSSTRGTHT LPLILKTPSS SIFASLASPR NTLSRIRISF SSVNCFPLIL SRKEDLASTQ 61 AKNPPFPFTS SLIKSLARV- 3-phase translation of AGS-9 (+strand): . . . . . . 60996 CAATTAAAGGTGCATGAACGTAATTATCCGACCCATGATTGGGAGTTGGCTGCGGTAGTG Q L K V H E R N Y P T H D W E L A A V V N - R C M N V I I R P M I G S W L R - C I K G A - T - L S D P - L G V G C G S . . . . . . 61056 TTTGCATTAAAGCAATAGAGACATTATCTATATGGGGTTAAGTGTGAAGTCTATACGGAT F A L K Q - R H Y L Y G V K C E V Y T D L H - S N R D I I Y M G L S V K S I R I V C I K A I E T L S I W G - V - S L Y G . . . . . . 61116 CATCGTAGTTTACTGTATGTCTTTACTTAGAAAGATTTGAATTTGAGACAGAGAAGGTGG H R S L L Y V F T - K D L N L R Q R R W I V V Y C M S L L R K I - I - D R E G G S S - F T V C L Y L E R F E F E T E K V . . . . . . 61176 ATGGAACTACTGAAGGACTATGATATCACTATTTTGTATCATCCGGGAAAAGCTAATGTT M E L L K D Y D I T I L Y H P G K A N V W N Y - R T M I S L F C I I R E K L M L D G T T E G L - Y H Y F V S S G K S - C . . . . . . 61236 GTGGCAGATGCTTTAAGTAGAAAGGCAGGGAGCATGGGAAGTCTAGCCCACTTGCAGGTT V A D A L S R K A G S M G S L A H L Q V W Q M L - V E R Q G A W E V - P T C R F C G R C F K - K G R E H G K S S P L A G . . . . . . 61296 TCTAGACGCCCATTGGCTAGAGAGGTTCAGACTCTGGCTAATGACTTTATGAGGCTAGAA S R R P L A R E V Q T L A N D F M R L E L D A H W L E R F R L W L M T L - G - K F - T P I G - R G S D S G - - L Y E A R . . . . . . 61356 GTAAATGGGAAGGGAGGATTTTTGGCCTGTGTGGAGGCAAGATCTTCCTTTCTTGATAAG V N G K G G F L A C V E A R S S F L D K - M G R E D F W P V W R Q D L P F L I R S K W E G R I F G L C G G K I F L S - - . . . . . . 61416 ATTAAAGGAAAACAGTTTACCGATGAGAAACTGATCCGGATCCGAGATAAGGTGTTGCGA I K G K Q F T D E K L I R I R D K V L R L K E N S L P M R N - S G S E I R C C E D - R K T V Y R - E T D P D P R - G V A . . . . . . 61476 GGAGAGGCTAAAGAAGCAAAAATCGATGAGGAAGGTGTTTTGAGAATTAAGGGAAGGGTA G E A K E A K I D E E G V L R I K G R V E R L K K Q K S M R K V F - E L R E G Y R R G - R S K N R - G R C F E N - G K G . . . . . . 61536 TGTGTACCCCGTGTCGATGATTTGATTCACACTATTCTTACAAAGGCTCATAGTTCAAGG C V P R V D D L I H T I L T K A H S S R V Y P V S M I - F T L F L Q R L I V Q G M C T P C R - F D S H Y S Y K G S - F K . . . . . . 61596 TATTCTATACATCCTGGTGCAACCAAGATGTATCGTGATCTAAAGCAACATTTTTTGTGG Y S I H P G A T K M Y R D L K Q H F L W I L Y I L V Q P R C I V I - S N I F C G V F Y T S W C N Q D V S - S K A T F F V . . . . . . 61656 AGTAGGATGAAGCGTGACATTGTTGATTTTGTTGCTCAATGCCCGAATTGTCAGCAAGTA S R M K R D I V D F V A Q C P N C Q Q V V G - S V T L L I L L L N A R I V S K - E - D E A - H C - F C C S M P E L S A S . . . . . . 61716 AAGTATGAACACCAGAGGCCTGGAGGGACACTTCAGAGAATGTCCATTCCTGAATGGAAG K Y E H Q R P G G T L Q R M S I P E W K S M N T R G L E G H F R E C P F L N G S K V - T P E A W R D T S E N V H S - M E . . . . . . 61776 TGGGAGAGAATTGCAATGGACTTCGTGGTTGGTCTTCCAAAGACAATGGGTAAGTATGAC W E R I A M D F V V G L P K T M G K Y D G R E L Q W T S W L V F Q R Q W V S M T V G E N C N G L R G W S S K D N G - V - . . . . . . 61836 TCCATTTGGGTAATTGTTGACAAATTAACTAAGTCTGCTCATTTCATTCCGGTCAAGGTG S I W V I V D K L T K S A H F I P V K V P F G - L L T N - L S L L I S F R S R - L H L G N C - Q I N - V C S F H S G Q G . . . . . . 61896 ACTTATAATGCAGAGAAGTTGGCCAAACTTTACATCTCAGAAATTGTTCGATTGCATGGA T Y N A E K L A K L Y I S E I V R L H G L I M Q R S W P N F T S Q K L F D C M E D L - C R E V G Q T L H L R N C S I A W . . . . . . 61956 GTTCCACTTTCCATTATATCAAATAGGGGTACGCAGTTTACTTCTATGTTTTGGAAAACA V P L S I I S N R G T Q F T S M F W K T F H F P L Y Q I G V R S L L L C F G K H S S T F H Y I K - G Y A V Y F Y V L E N . . 62016 TTGCATGCTGA L H A C M L I A C - Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-9_AGS-9_PPS_1 (61146 62024) (frame '1'; 879 bp, 293 residues) 1 KDLNLRQRRW MELLKDYDIT ILYHPGKANV VADALSRKAG SMGSLAHLQV SRRPLAREVQ 61 TLANDFMRLE VNGKGGFLAC VEARSSFLDK IKGKQFTDEK LIRIRDKVLR GEAKEAKIDE 121 EGVLRIKGRV CVPRVDDLIH TILTKAHSSR YSIHPGATKM YRDLKQHFLW SRMKRDIVDF 181 VAQCPNCQQV KYEHQRPGGT LQRMSIPEWK WERIAMDFVV GLPKTMGKYD SIWVIVDKLT 241 KSAHFIPVKV TYNAEKLAKL YISEIVRLHG VPLSIISNRG TQFTSMFWKT LHA PGL 10 (- strand): 63330 62338 AGS-1 (63330 62338) SCR (e 0.858) Exon 1 63330 62338 ( 993 n); score: 0.858 PGS (62990 62338) SGN-E354383- PGS (63195 62652) SGN-E252199- PGS (63330 62980) SGN-E242274- 3-phase translation of AGS-1 (-strand): . . . . . . 63330 TTATTTCAAGGTTATCACCTTTAACCCCCAAGTAATTGAATTATTAACATTAACCCACTA L F Q G Y H L - P P S N - I I N I N P L Y F K V I T F N P Q V I E L L T L T H - I S R L S P L T P K - L N Y - H - P T . . . . . . 63270 ACTTTACAATTATAAGCAGGAATAGTCCAAAACGCCCCTTAAAACATTTAACAGAAATCC T L Q L - A G I V Q N A P - N I - Q K S L Y N Y K Q E - S K T P L K T F N R N P N F T I I S R N S P K R P L K H L T E I . . . . . . 63210 GACTCAGTCAGGGTTACGCAGCCTGTGACGGCCCGTCGTGCCTGCGACGGTCCGTCCTGC D S V R V T Q P V T A R R A C D G P S C T Q S G L R S L - R P V V P A T V R P A R L S Q G Y A A C D G P S C L R R S V L . . . . . . 63150 TGCTTCCGTCACAAAGTTCAGAGACTGAATTTCATTAAAGGGTCTGTGACGGTCCATCGT C F R H K V Q R L N F I K G S V T V H R A S V T K F R D - I S L K G L - R S I V L L P S Q S S E T E F H - R V C D G P S . . . . . . 63090 GCCCACGACGGTCCGTCCTGCCATGTCGTCGCGAAGTTCAGATAGTTGTTCTCAGTACCC A H D G P S C H V V A K F R - L F S V P P T T V R P A M S S R S S D S C S Q Y P C P R R S V L P C R R E V Q I V V L S T . . . . . . 63030 AAAATTTTAGAATCTAAGTGTTTTGGAACGAGACCCCTTCGACGGTCCGTCGTGGGATCC K I L E S K C F G T R P L R R S V V G S K F - N L S V L E R D P F D G P S W D P Q N F R I - V F W N E T P S T V R R G I . . . . . . 62970 GTCGACCCAGACAACTATTACTAGAATAAACTCTACTGCTCAAAACGACTAACAGGTCGT V D P D N Y Y - N K L Y C S K R L T G R S T Q T T I T R I N S T A Q N D - Q V V R R P R Q L L L E - T L L L K T T N R S . . . . . . 62910 TACAATAGATACCAATTTACCCATCGTTTGTCCCCGAACGATCACAAGAAGAAAAACAAG Y N R Y Q F T H R L S P N D H K K K N K T I D T N L P I V C P R T I T R R K T R L Q - I P I Y P S F V P E R S Q E E K Q . . . . . . 62850 GGCGAAAAGGAGTACCTGAATCTGTAAACAGGTGTGGGTATTTTTCTTGCATATCAGCCT G E K E Y L N L - T G V G I F L A Y Q P A K R S T - I C K Q V W V F F L H I S L G R K G V P E S V N R C G Y F S C I S A . . . . . . 62790 CCTTCTCCCAAGTGGACTTTTCAATTGGTCGATTCTTCCATTGAACCTTGATGGATGCAA P S P K W T F Q L V D S S I E P - W M Q L L P S G L F N W S I L P L N L D G C N S F S Q V D F S I G R F F H - T L M D A . . . . . . 62730 TCTCCCTTGACCTCAACTTGCGGACTTCTCTATCTAAAATAGCAACAGACTCCTCCTCAT S P L T S T C G L L Y L K - Q Q T P P H L P - P Q L A D F S I - N S N R L L L I I S L D L N L R T S L S K I A T D S S S . . . . . . 62670 AAGATAAATTCTCATCAAGAAGAACTGAATCCCAATGAATGATGTAGTTTCCATCCCCGT K I N S H Q E E L N P N E - C S F H P R R - I L I K K N - I P M N D V V S I P V - D K F S S R R T E S Q - M M - F P S P . . . . . . 62610 GGTATCTTTTCAACATAGACACATGAAATACCAGGTGCACTCCTGAGAGTCCTGGGGGCA G I F S T - T H E I P G A L L R V L G A V S F Q H R H M K Y Q V H S - E S W G Q W Y L F N I D T - N T R C T P E S P G G . . . . . . 62550 AGGCTAATTCATAAGCTACCTCCCCCACGCGCTTCAGAACTTCAAATGGACCAATGTACC R L I H K L P P P R A S E L Q M D Q C T G - F I S Y L P H A L Q N F K W T N V P K A N S - A T S P T R F R T S N G P M Y . . . . . . 62490 TCGGACTAAGCTTACCTCGCTTACCGAACCGCATCACCCCTTTCATGGGTGAAACCTTCA S D - A Y L A Y R T A S P L S W V K P S R T K L T S L T E P H H P F H G - N L Q L G L S L P R L P N R I T P F M G E T F . . . . . . 62430 GCAAGACTTGTTCACCCTCGATAAACTCCAAGTCTCTAACCTTTCGATCTGCATATTCTT A R L V H P R - T P S L - P F D L H I L Q D L F T L D K L Q V S N L S I C I F F S K T C S P S I N S K S L T F R S A Y S . . . . 62370 CCTGTCTACTTTGAGCCGCTAAAAGCTTTTCTT P V Y F E P L K A F L L S T L S R - K L F S C L L - A A K S F S Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (+strand): . . . . . . 62338 AAGAAAAGCTTTTAGCGGCTCAAAGTAGACAGGAAGAATATGCAGATCGAAAGGTTAGAG K K S F - R L K V D R K N M Q I E R L E R K A F S G S K - T G R I C R S K G - R E K L L A A Q S R Q E E Y A D R K V R . . . . . . 62398 ACTTGGAGTTTATCGAGGGTGAACAAGTCTTGCTGAAGGTTTCACCCATGAAAGGGGTGA T W S L S R V N K S C - R F H P - K G - L G V Y R G - T S L A E G F T H E R G D D L E F I E G E Q V L L K V S P M K G V . . . . . . 62458 TGCGGTTCGGTAAGCGAGGTAAGCTTAGTCCGAGGTACATTGGTCCATTTGAAGTTCTGA C G S V S E V S L V R G T L V H L K F - A V R - A R - A - S E V H W S I - S S E M R F G K R G K L S P R Y I G P F E V L . . . . . . 62518 AGCGCGTGGGGGAGGTAGCTTATGAATTAGCCTTGCCCCCAGGACTCTCAGGAGTGCACC S A W G R - L M N - P C P Q D S Q E C T A R G G G S L - I S L A P R T L R S A P K R V G E V A Y E L A L P P G L S G V H . . . . . . 62578 TGGTATTTCATGTGTCTATGTTGAAAAGATACCACGGGGATGGAAACTACATCATTCATT W Y F M C L C - K D T T G M E T T S F I G I S C V Y V E K I P R G W K L H H S L L V F H V S M L K R Y H G D G N Y I I H . . . . . . 62638 GGGATTCAGTTCTTCTTGATGAGAATTTATCTTATGAGGAGGAGTCTGTTGCTATTTTAG G I Q F F L M R I Y L M R R S L L L F - G F S S S - - E F I L - G G V C C Y F R W D S V L L D E N L S Y E E E S V A I L . . . . . . 62698 ATAGAGAAGTCCGCAAGTTGAGGTCAAGGGAGATTGCATCCATCAAGGTTCAATGGAAGA I E K S A S - G Q G R L H P S R F N G R - R S P Q V E V K G D C I H Q G S M E E D R E V R K L R S R E I A S I K V Q W K . . . . . . 62758 ATCGACCAATTGAAAAGTCCACTTGGGAGAAGGAGGCTGATATGCAAGAAAAATACCCAC I D Q L K S P L G R R R L I C K K N T H S T N - K V H L G E G G - Y A R K I P T N R P I E K S T W E K E A D M Q E K Y P . . . . . . 62818 ACCTGTTTACAGATTCAGGTACTCCTTTTCGCCCTTGTTTTTCTTCTTGTGATCGTTCGG T C L Q I Q V L L F A L V F L L V I V R P V Y R F R Y S F S P L F F F L - S F G H L F T D S G T P F R P C F S S C D R S . . . . . . 62878 GGACAAACGATGGGTAAATTGGTATCTATTGTAACGACCTGTTAGTCGTTTTGAGCAGTA G Q T M G K L V S I V T T C - S F - A V D K R W V N W Y L L - R P V S R F E Q - G T N D G - I G I Y C N D L L V V L S S . . . . . . 62938 GAGTTTATTCTAGTAATAGTTGTCTGGGTCGACGGATCCCACGACGGACCGTCGAAGGGG E F I L V I V V W V D G S H D G P S K G S L F - - - L S G S T D P T T D R R R G R V Y S S N S C L G R R I P R R T V E G . . . . . . 62998 TCTCGTTCCAAAACACTTAGATTCTAAAATTTTGGGTACTGAGAACAACTATCTGAACTT S R S K T L R F - N F G Y - E Q L S E L L V P K H L D S K I L G T E N N Y L N F V S F Q N T - I L K F W V L R T T I - T . . . . . . 63058 CGCGACGACATGGCAGGACGGACCGTCGTGGGCACGATGGACCGTCACAGACCCTTTAAT R D D M A G R T V V G T M D R H R P F N A T T W Q D G P S W A R W T V T D P L M S R R H G R T D R R G H D G P S Q T L - . . . . . . 63118 GAAATTCAGTCTCTGAACTTTGTGACGGAAGCAGCAGGACGGACCGTCGCAGGCACGACG E I Q S L N F V T E A A G R T V A G T T K F S L - T L - R K Q Q D G P S Q A R R - N S V S E L C D G S S R T D R R R H D . . . . . . 63178 GGCCGTCACAGGCTGCGTAACCCTGACTGAGTCGGATTTCTGTTAAATGTTTTAAGGGGC G R H R L R N P D - V G F L L N V L R G A V T G C V T L T E S D F C - M F - G A G P S Q A A - P - L S R I S V K C F K G . . . . . . 63238 GTTTTGGACTATTCCTGCTTATAATTGTAAAGTTAGTGGGTTAATGTTAATAATTCAATT V L D Y S C L - L - S - W V N V N N S I F W T I P A Y N C K V S G L M L I I Q L R F G L F L L I I V K L V G - C - - F N . . . . 63298 ACTTGGGGGTTAAAGGTGATAACCTTGAAATAA T W G L K V I T L K - L G G - R - - P - N Y L G V K G D N L E I Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-10_AGS-1_PPS_1 (62340 62894) (frame '0'; 552 bp, 184 residues) 1 EKLLAAQSRQ EEYADRKVRD LEFIEGEQVL LKVSPMKGVM RFGKRGKLSP RYIGPFEVLK 61 RVGEVAYELA LPPGLSGVHL VFHVSMLKRY HGDGNYIIHW DSVLLDENLS YEEESVAILD 121 REVRKLRSRE IASIKVQWKN RPIEKSTWEK EADMQEKYPH LFTDSGTPFR PCFSSCDRSG 181 TNDG- PGL 11 (+ strand): 62980 65006 AGS-1 (62980 63583) SCR (e 0.765) Exon 1 62980 63583 ( 604 n); score: 0.765 PGS (62980 63583) SGN-E349296+ 3-phase translation of AGS-1 (+strand): . . . . . . 62980 GACGGACCGTCGAAGGGGTCTCGTTCCAAAACACTTAGATTCTAAAATTTTGGGTACTGA D G P S K G S R S K T L R F - N F G Y - T D R R R G L V P K H L D S K I L G T E R T V E G V S F Q N T - I L K F W V L . . . . . . 63040 GAACAACTATCTGAACTTCGCGACGACATGGCAGGACGGACCGTCGTGGGCACGATGGAC E Q L S E L R D D M A G R T V V G T M D N N Y L N F A T T W Q D G P S W A R W T R T T I - T S R R H G R T D R R G H D G . . . . . . 63100 CGTCACAGACCCTTTAATGAAATTCAGTCTCTGAACTTTGTGACGGAAGCAGCAGGACGG R H R P F N E I Q S L N F V T E A A G R V T D P L M K F S L - T L - R K Q Q D G P S Q T L - - N S V S E L C D G S S R T . . . . . . 63160 ACCGTCGCAGGCACGACGGGCCGTCACAGGCTGCGTAACCCTGACTGAGTCGGATTTCTG T V A G T T G R H R L R N P D - V G F L P S Q A R R A V T G C V T L T E S D F C D R R R H D G P S Q A A - P - L S R I S . . . . . . 63220 TTAAATGTTTTAAGGGGCGTTTTGGACTATTCCTGCTTATAATTGTAAAGTTAGTGGGTT L N V L R G V L D Y S C L - L - S - W V - M F - G A F W T I P A Y N C K V S G L V K C F K G R F G L F L L I I V K L V G . . . . . . 63280 AATGTTAATAATTCAATTACTTGGGGGTTAAAGGTGATAACCTTGAAATAAATAGTGGGT N V N N S I T W G L K V I T L K - I V G M L I I Q L L G G - R - - P - N K - W V - C - - F N Y L G V K G D N L E I N S G . . . . . . 63340 TACTTTTACCATCTTTTATACTTAATTATATGGTAATTAGGGTAAAAGAAAAAGAGTTTG Y F Y H L L Y L I I W - L G - K K K S L T F T I F Y T - L Y G N - G K R K R V - L L L P S F I L N Y M V I R V K E K E F . . . . . . 63400 AATAAGGAAAAATAGAAAGAACAGAAGAGAGGGACGAACGAGCGAGAGAAGATAGAACGA N K E K - K E Q K R G T N E R E K I E R I R K N R K N R R E G R T S E R R - N E E - G K I E R T E E R D E R A R E D R T . . . . . . 63460 AGAGGAAAGCAAAGACCTTGAAGAGTAGCTTGCGTGATCACGAATTCTTCGATGGAAGTA R G K Q R P - R V A C V I T N S S M E V E E S K D L E E - L A - S R I L R W K - K R K A K T L K S S L R D H E F F D G S . . . . . . 63520 GGTTATGGTTTATGTTATTTCATAGTAAACTCTTAATAGCGAATGATATGTATTGGGTAG G Y G L C Y F I V N S - - R M I C I G - V M V Y V I S - - T L N S E - Y V L G S R L W F M L F H S K L L I A N D M Y W V . 63580 TATT Y I V Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (-strand): . . . . . . 63583 AATACTACCCAATACATATCATTCGCTATTAAGAGTTTACTATGAAATAACATAAACCAT N T T Q Y I S F A I K S L L - N N I N H I L P N T Y H S L L R V Y Y E I T - T I Y Y P I H I I R Y - E F T M K - H K P . . . . . . 63523 AACCTACTTCCATCGAAGAATTCGTGATCACGCAAGCTACTCTTCAAGGTCTTTGCTTTC N L L P S K N S - S R K L L F K V F A F T Y F H R R I R D H A S Y S S R S L L S - P T S I E E F V I T Q A T L Q G L C F . . . . . . 63463 CTCTTCGTTCTATCTTCTCTCGCTCGTTCGTCCCTCTCTTCTGTTCTTTCTATTTTTCCT L F V L S S L A R S S L S S V L S I F P S S F Y L L S L V R P S L L F F L F F L P L R S I F S R S F V P L F C S F Y F S . . . . . . 63403 TATTCAAACTCTTTTTCTTTTACCCTAATTACCATATAATTAAGTATAAAAGATGGTAAA Y S N S F S F T L I T I - L S I K D G K I Q T L F L L P - L P Y N - V - K M V K L F K L F F F Y P N Y H I I K Y K R W - . . . . . . 63343 AGTAACCCACTATTTATTTCAAGGTTATCACCTTTAACCCCCAAGTAATTGAATTATTAA S N P L F I S R L S P L T P K - L N Y - V T H Y L F Q G Y H L - P P S N - I I N K - P T I Y F K V I T F N P Q V I E L L . . . . . . 63283 CATTAACCCACTAACTTTACAATTATAAGCAGGAATAGTCCAAAACGCCCCTTAAAACAT H - P T N F T I I S R N S P K R P L K H I N P L T L Q L - A G I V Q N A P - N I T L T H - L Y N Y K Q E - S K T P L K T . . . . . . 63223 TTAACAGAAATCCGACTCAGTCAGGGTTACGCAGCCTGTGACGGCCCGTCGTGCCTGCGA L T E I R L S Q G Y A A C D G P S C L R - Q K S D S V R V T Q P V T A R R A C D F N R N P T Q S G L R S L - R P V V P A . . . . . . 63163 CGGTCCGTCCTGCTGCTTCCGTCACAAAGTTCAGAGACTGAATTTCATTAAAGGGTCTGT R S V L L L P S Q S S E T E F H - R V C G P S C C F R H K V Q R L N F I K G S V T V R P A A S V T K F R D - I S L K G L . . . . . . 63103 GACGGTCCATCGTGCCCACGACGGTCCGTCCTGCCATGTCGTCGCGAAGTTCAGATAGTT D G P S C P R R S V L P C R R E V Q I V T V H R A H D G P S C H V V A K F R - L - R S I V P T T V R P A M S S R S S D S . . . . . . 63043 GTTCTCAGTACCCAAAATTTTAGAATCTAAGTGTTTTGGAACGAGACCCCTTCGACGGTC V L S T Q N F R I - V F W N E T P S T V F S V P K I L E S K C F G T R P L R R S C S Q Y P K F - N L S V L E R D P F D G . 62983 CGTC R V P Maximal non-overlapping open reading frames (>= 64 codons): none AGS-2 (63678 63973,64034 64255) SCR (e 0.841 d 0.000 a 0.000,e 0.718) Exon 1 63678 63973 ( 296 n); score: 0.841 Intron 1 63974 64033 ( 60 n); Pd: 0.000 Pa: 0.000 Exon 2 64034 64255 ( 222 n); score: 0.718 PGS (63678 63973,64034 64255) SGN-E242359+ PGS (63847 63993) SGN-E347579+ 3-phase translation of AGS-2 (+strand): . . . . . . 63678 AACCCTCTGTGTTAATGATGATGCCTTGGTATAAAAGAAGGCTTGATGAACTAAAAGAAT N P L C - - - C L G I K E G L M N - K N T L C V N D D A L V - K K A - - T K R M P S V L M M M P W Y K R R L D E L K E . . . . . . 63738 GAGGTTAGTGGATCAGGTGTCACGTTCCGACACCAGGATAGTAGTAGTGAATCGGGTGTC E V S G S G V T F R H Q D S S S E S G V R L V D Q V S R S D T R I V V V N R V S - G - W I R C H V P T P G - - - - I G C . . . . . . 63798 ACGTTCCGACACTAGGATAGTAATAGTGGATCGGGTCACGTTCCGACACCAGGATAGTAA T F R H - D S N S G S G H V P T P G - - R S D T R I V I V D R V T F R H Q D S N H V P T L G - - - W I G S R S D T R I V . . . . . . 63858 TAGTGGATCGGGTGTCACGTTCTGACACCAAGATACTAGTAATGGATCGGGTGTCACGTT - W I G C H V L T P R Y - - W I G C H V S G S G V T F - H Q D T S N G S G V T F I V D R V S R S D T K I L V M D R V S R . . . . . . : 63918 CCGACACCAGGATAGTAGTAATGGATCGGGTATCACGTTCCGACACCAGGATAGTA : TAGT P T P G - - - W I G Y H V P T P G - Y : S R H Q D S S N G S G I T F R H Q D S : I V S D T R I V V M D R V S R S D T R I V : - . . . . . . 64038 AGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGTAAAAAGAATGAATCTTGAATCAT R G S E C H V P T P G - - K E - I L N H E D R S V T F R H Q D S K K N E S - I M - R I G V S R S D T R I V K R M N L E S . . . . . . 64098 GTTAATATACTCAGGTTTAAAGAAACTATTTCCCAAACGAGTATGGTGTGGAGGCGTGAG V N I L R F K E T I S Q T S M V W R R E L I Y S G L K K L F P K R V W C G G V S C - Y T Q V - R N Y F P N E Y G V E A - . . . . . . 64158 TACTCATGGATGCGCTTGGGTTGTGGCCAATGGTTATGGTACTTGTTGTTGTTGTCTGTT Y S W M R L G C G Q W L W Y L L L L S V T H G C A W V V A N G Y G T C C C C L L V L M D A L G L W P M V M V L V V V V C . . . . 64218 GAGTATTGTAGTTGATTTTATGTTATTATCTGATATAT E Y C S - F Y V I I - Y S I V V D F M L L S D I - V L - L I L C Y Y L I Y Maximal non-overlapping open reading frames (>= 64 codons): none AGS-3 (63687 63809,63851 63963,64029 64761) SCR (e 0.886 d 0.000 a 0.000,e 0.752 d 0.000 a 0.000,e 0.856) Exon 1 63687 63809 ( 123 n); score: 0.886 Intron 1 63810 63850 ( 41 n); Pd: 0.000 Pa: 0.000 Exon 2 63851 63963 ( 113 n); score: 0.752 Intron 2 63964 64028 ( 65 n); Pd: 0.000 Pa: 0.000 Exon 3 64029 64761 ( 733 n); score: 0.856 PGS (63687 63809,63851 63963,64029 64490) SGN-E241789- PGS (64355 64761) SGN-E370357- PGS (64357 64618) SGN-E373117+ PGS (64357 64618) SGN-E373116- PGS (64402 64618) SGN-E298638+ PGS (64433 64596) SGN-E238551+ PGS (64433 64586) SGN-E352844+ 3-phase translation of AGS-3 (+strand): . . . . . . 63687 TGTTAATGATGATGCCTTGGTATAAAAGAAGGCTTGATGAACTAAAAGAATGAGGTTAGT C - - - C L G I K E G L M N - K N E V S V N D D A L V - K K A - - T K R M R L V L M M M P W Y K R R L D E L K E - G - . . . . . . 63747 GGATCAGGTGTCACGTTCCGACACCAGGATAGTAGTAGTGAATCGGGTGTCACGTTCCGA G S G V T F R H Q D S S S E S G V T F R D Q V S R S D T R I V V V N R V S R S D W I R C H V P T P G - - - - I G C H V P . : . . . . . 63807 CAC : ATAGTAATAGTGGATCGGGTGTCACGTTCTGACACCAAGATACTAGTAATGGATCGG H : I V I V D R V S R S D T K I L V M D R T : - - - W I G C H V L T P R Y - - W I G T : H S N S G S G V T F - H Q D T S N G S . . . . . . : 63908 GTGTCACGTTCCGACACCAGGATAGTAGTAATGGATCGGGTATCACGTTCCGACAC : GATA V S R S D T R I V V M D R V S R S D T : I C H V P T P G - - - W I G Y H V P T : R - G V T F R H Q D S S N G S G I T F R H : D . . . . . . 64033 GTAGTAGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGTAAAAAGAATGAATCTTGA V V E D R S V T F R H Q D S K K N E S - - - R I G V S R S D T R I V K R M N L E S S R G S E C H V P T P G - - K E - I L . . . . . . 64093 ATCATGTTAATATACTCAGGTTTAAAGAAACTATTTCCCAAACGAGTATGGTGTGGAGGC I M L I Y S G L K K L F P K R V W C G G S C - Y T Q V - R N Y F P N E Y G V E A N H V N I L R F K E T I S Q T S M V W R . . . . . . 64153 GTGAGTACTCATGGATGCGCTTGGGTTGTGGCCAATGGTTATGGTACTTGTTGTTGTTGT V S T H G C A W V V A N G Y G T C C C C - V L M D A L G L W P M V M V L V V V V R E Y S W M R L G C G Q W L W Y L L L L . . . . . . 64213 CTGTTGAGTATTGTAGTTGATTTTATGTTATTATCTGATATATGTTATTTTCTATTTTGA L L S I V V D F M L L S D I C Y F L F - C - V L - L I L C Y Y L I Y V I F Y F E S V E Y C S - F Y V I I - Y M L F S I L . . . . . . 64273 GTTGGCCGATGATACCTACTCAGTACTTGTGCCTTGTACTGACCCCTACTTGTATGTTTC V G R - Y L L S T C A L Y - P L L V C F L A D D T Y S V L V P C T D P Y L Y V S S W P M I P T Q Y L C L V L T P T C M F . . . . . . 64333 TTTCTTGTTATTTTTGGAGTGCAGCAAACGTGCCATCGACTTCGACTCAACCGCAACTCT F L V I F G V Q Q T C H R L R L N R N S F L L F L E C S K R A I D F D S T A T L L S C Y F W S A A N V P S T S T Q P Q L . . . . . . 64393 AGCCAGACTTCAGCATAATCAGATTTCAGGGTGAGCTATTGTTCCTAGTTCGGACTGGAT S Q T S A - S D F R V S Y C S - F G L D A R L Q H N Q I S G - A I V P S S D W I - P D F S I I R F Q G E L L F L V R T G . . . . . . 64453 TCTTTCCTTCGCGTCTTGATGTCTTGAAGTTCGGACATGGACCATCTCTTTTACTTATTT S F L R V L M S - S S D M D H L F Y L F L S F A S - C L E V R T W T I S F T Y F F F P S R L D V L K F G H G P S L L L I . . . . . . 64513 TAGCTTCTTAGATACTCTTAGATTTAGTAATTTGAGGATAGATGTTCTTGTGATGATGAC - L L R Y S - I - - F E D R C S C D D D S F L D T L R F S N L R I D V L V M M T L A S - I L L D L V I - G - M F L - - - . . . . . . 64573 TTCCAGATTTTGGGGATAATGATAAGTTTTGAGTTTTAGAAGTTAATTGTTGATTTCGTT F Q I L G I M I S F E F - K L I V D F V S R F W G - - - V L S F R S - L L I S L L P D F G D N D K F - V L E V N C - F R . . . . . . 64633 AATGAGTTTTAAGTCTTCCGCATTATATTCTATTTATTATCGTTGAATTGTTTGGGTTTA N E F - V F R I I F Y L L S L N C L G L M S F K S S A L Y S I Y Y R - I V W V - - - V L S L P H Y I L F I I V E L F G F . . . . . . 64693 GATTGGTTTGTTCGCTCACATAGGAGGGTAAGTATGGGTGCCACTCGCGGCCTGTTTTGG D W F V R S H R R V S M G A T R G L F W I G L F A H I G G - V W V P L A A C F G R L V C S L T - E G K Y G C H S R P V L . 64753 GTCGTGACA V V T S - G R D Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-11_AGS-3_PPS_1 (63732 63809,63851 63963,64029 64092) (frame '1'; 252 bp, 84 residues) 1 KNEVSGSGVT FRHQDSSSES GVTFRHIVIV DRVSRSDTKI LVMDRVSRSD TRIVVMDRVS 61 RSDTIVVEDR SVTFRHQDSK KNES- >C08HBa0294K15.1+_PGL-11_AGS-3_PPS_2 (64229 64426) (frame '2'; 195 bp, 65 residues) 1 LILCYYLIYV IFYFELADDT YSVLVPCTDP YLYVSFLLFL ECSKRAIDFD STATLARLQH 61 NQISG- AGS-4 (63837 63934,63998 64597) SCR (e 0.801 d 0.000 a 0.000,e 0.775) Exon 1 63837 63934 ( 98 n); score: 0.801 Intron 1 63935 63997 ( 63 n); Pd: 0.000 Pa: 0.000 Exon 2 63998 64597 ( 600 n); score: 0.775 PGS (63837 63934,63998 64597) SGN-E546506- 3-phase translation of AGS-4 (+strand): . . . . . . 63837 GTTCCGACACCAGGATAGTAATAGTGGATCGGGTGTCACGTTCTGACACCAAGATACTAG V P T P G - - - W I G C H V L T P R Y - F R H Q D S N S G S G V T F - H Q D T S S D T R I V I V D R V S R S D T K I L . . . . : . . 63897 TAATGGATCGGGTGTCACGTTCCGACACCAGGATAGTA : TAGTGGATCGGGTGTCACGTTC - W I G C H V P T P G - Y : S G S G V T F N G S G V T F R H Q D S : I V D R V S R S V M D R V S R S D T R I V : - W I G C H V . . . . . . 64020 TGACACCAGGATAGTAGTAGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGTAAAAA - H Q D S S R G S E C H V P T P G - - K D T R I V V E D R S V T F R H Q D S K K L T P G - - - R I G V S R S D T R I V K . . . . . . 64080 GAATGAATCTTGAATCATGTTAATATACTCAGGTTTAAAGAAACTATTTCCCAAACGAGT E - I L N H V N I L R F K E T I S Q T S N E S - I M L I Y S G L K K L F P K R V R M N L E S C - Y T Q V - R N Y F P N E . . . . . . 64140 ATGGTGTGGAGGCGTGAGTACTCATGGATGCGCTTGGGTTGTGGCCAATGGTTATGGTAC M V W R R E Y S W M R L G C G Q W L W Y W C G G V S T H G C A W V V A N G Y G T Y G V E A - V L M D A L G L W P M V M V . . . . . . 64200 TTGTTGTTGTTGTCTGTTGAGTATTGTAGTTGATTTTATGTTATTATCTGATATATGTTA L L L L S V E Y C S - F Y V I I - Y M L C C C C L L S I V V D F M L L S D I C Y L V V V V C - V L - L I L C Y Y L I Y V . . . . . . 64260 TTTTCTATTTTGAGTTGGCCGATGATACCTACTCAGTACTTGTGCCTTGTACTGACCCCT F S I L S W P M I P T Q Y L C L V L T P F L F - V G R - Y L L S T C A L Y - P L I F Y F E L A D D T Y S V L V P C T D P . . . . . . 64320 ACTTGTATGTTTCTTTCTTGTTATTTTTGGAGTGCAGCAAACGTGCCATCGACTTCGACT T C M F L S C Y F W S A A N V P S T S T L V C F F L V I F G V Q Q T C H R L R L Y L Y V S F L L F L E C S K R A I D F D . . . . . . 64380 CAACCGCAACTCTAGCCAGACTTCAGCATAATCAGATTTCAGGGTGAGCTATTGTTCCTA Q P Q L - P D F S I I R F Q G E L L F L N R N S S Q T S A - S D F R V S Y C S - S T A T L A R L Q H N Q I S G - A I V P . . . . . . 64440 GTTCGGACTGGATTCTTTCCTTCGCGTCTTGATGTCTTGAAGTTCGGACATGGACCATCT V R T G F F P S R L D V L K F G H G P S F G L D S F L R V L M S - S S D M D H L S S D W I L S F A S - C L E V R T W T I . . . . . . 64500 CTTTTACTTATTTTAGCTTCTTAGATACTCTTAGATTTAGTAATTTGAGGATAGATGTTC L L L I L A S - I L L D L V I - G - M F F Y L F - L L R Y S - I - - F E D R C S S F T Y F S F L D T L R F S N L R I D V . . . . 64560 TTGTGATGATGACTTCCAGATTTTGGGGATAATGATAA L - - - L P D F G D N D C D D D F Q I L G I M I L V M M T S R F W G - - - Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0294K15.1+_PGL-11_AGS-4_PPS_1 (64229 64426) (frame '0'; 195 bp, 65 residues) 1 LILCYYLIYV IFYFELADDT YSVLVPCTDP YLYVSFLLFL ECSKRAIDFD STATLARLQH 61 NQISG- AGS-5 (64830 65006) SCR (e 0.890) Exon 1 64830 65006 ( 177 n); score: 0.890 PGS (64830 65006) SGN-E369471+ 3-phase translation of AGS-5 (+strand): . . . . . . 64830 TATCGGTTAACCCGTTAAGAAAAAACTTCAAACCGTTAAGAACCGATAACCCGATAACAA Y R L T R - E K T S N R - E P I T R - Q I G - P V K K K L Q T V K N R - P D N K S V N P L R K N F K P L R T D N P I T . . . . . . 64890 AAAAATCAAAACCGTTATTAAAACCACTAAACTAATAACCCAATACTATAAACCAATAAC K N Q N R Y - N H - T N N P I L - T N N K I K T V I K T T K L I T Q Y Y K P I T K K S K P L L K P L N - - P N T I N Q - . . . . . . 64950 TTTTTTATCGATTCGGCTTATCGGTTTCGATTCGATTTTGAACTGCCCTATGGACGT F F I D S A Y R F R F D F E L P Y G R F L S I R L I G F D S I L N C P M D L F Y R F G L S V S I R F - T A L W T Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-5 (-strand): . . . . . . 65006 ACGTCCATAGGGCAGTTCAAAATCGAATCGAAACCGATAAGCCGAATCGATAAAAAAGTT T S I G Q F K I E S K P I S R I D K K V R P - G S S K S N R N R - A E S I K K L V H R A V Q N R I E T D K P N R - K S . . . . . . 64946 ATTGGTTTATAGTATTGGGTTATTAGTTTAGTGGTTTTAATAACGGTTTTGATTTTTTTG I G L - Y W V I S L V V L I T V L I F L L V Y S I G L L V - W F - - R F - F F C Y W F I V L G Y - F S G F N N G F D F F . . . . . . 64886 TTATCGGGTTATCGGTTCTTAACGGTTTGAAGTTTTTTCTTAACGGGTTAACCGATA L S G Y R F L T V - S F F L T G - P I Y R V I G S - R F E V F S - R V N R V I G L S V L N G L K F F L N G L T D Maximal non-overlapping open reading frames (>= 64 codons): none PGL 12 (+ strand): 71509 72142 AGS-1 (71509 72142) SCR (e 0.920) Exon 1 71509 72142 ( 634 n); score: 0.920 PGS (71509 72142) SGN-E547448+ 3-phase translation of AGS-1 (+strand): . . . . . . 71509 CCCAACCCAACCCCCATACCCATACACCAGTGGTTATCTTCTTCCCCCATCATTCTAATG P N P T P I P I H Q W L S S S P I I L M P T Q P P Y P Y T S G Y L L P P S F - - Q P N P H T H T P V V I F F P H H S N . . . . . . 71569 ATTTCAAAATTCTTAGTATCAGTGGTTATATTCTTCCCCCACCATTCTAATGGTTTCAAA I S K F L V S V V I F F P H H S N G F K F Q N S - Y Q W L Y S S P T I L M V S K D F K I L S I S G Y I L P P P F - W F Q . . . . . . 71629 ATTCTTAGCATTTTGTTTCATTTATAAATTTTTTGAAGAGATTCTTTTCCCATTCTTTCT I L S I L F H L - I F - R D S F P I L S F L A F C F I Y K F F E E I L F P F F L N S - H F V S F I N F L K R F F S H S F . . . . . . 71689 CTACCTAAAAAACGAGATGAAGTAAAAAGTTATAATTAATAAAAAAGCTGATGAAAAAAA L P K K R D E V K S Y N - - K S - - K K Y L K N E M K - K V I I N K K A D E K K S T - K T R - S K K L - L I K K L M K K . . . . . . 71749 AATTGTCGGATTAAAGATGGAACCGTATAGGGAGGGGAGGGTAGCCATTAATGGAGTTAG N C R I K D G T V - G G E G S H - W S - I V G L K M E P Y R E G R V A I N G V R K L S D - R W N R I G R G G - P L M E L . . . . . . 71809 GGGAAATGTATGTTTTGTTCCAGTTGAAGGCAGGGAAGTTTAGGTTTTACTTTTTTTTTC G K C M F C S S - R Q G S L G F T F F F G N V C F V P V E G R E V - V L L F F S G E M Y V L F Q L K A G K F R F Y F F F . . . . . . 71869 ATTTTTTTACTTTAAAATAATTTTTATTTTTTTTACTTTATAATATAATGTGTAAATAAT I F L L - N N F Y F F Y F I I - C V N N F F Y F K I I F I F F T L - Y N V - I I H F F T L K - F L F F L L Y N I M C K - . . . . . . 71929 TTTTTGGATTAAAAATAACACATGTCATTATTTCATTGGTCAAATTGACATGTCAGCGAG F L D - K - H M S L F H W S N - H V S E F W I K N N T C H Y F I G Q I D M S A S F F G L K I T H V I I S L V K L T C Q R . . . . . . 71989 TGTATTTCACACATCCTCTATTTTTTGTTTATTCTCGAAAAAATGTTCAAATCGTTCAAA C I S H I L Y F L F I L E K M F K S F K V F H T S S I F C L F S K K C S N R S N V Y F T H P L F F V Y S R K N V Q I V Q . . . . . . 72049 TTCAGAATGGTTGAAGTGTTCAATAGATCGTACGTCTAGTTGAGGTGTCTAAATGAGTAA F R M V E V F N R S Y V - L R C L N E - S E W L K C S I D R T S S - G V - M S N I Q N G - S V Q - I V R L V E V S K - V . . . . 72109 TCGGGACAAGTTTGAGTGGCCGCATATGACTTTG S G Q V - V A A Y D F R D K F E W P H M T L I G T S L S G R I - L Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (-strand): . . . . . . 72142 CAAAGTCATATGCGGCCACTCAAACTTGTCCCGATTACTCATTTAGACACCTCAACTAGA Q S H M R P L K L V P I T H L D T S T R K V I C G H S N L S R L L I - T P Q L D K S Y A A T Q T C P D Y S F R H L N - . . . . . . 72082 CGTACGATCTATTGAACACTTCAACCATTCTGAATTTGAACGATTTGAACATTTTTTCGA R T I Y - T L Q P F - I - T I - T F F R V R S I E H F N H S E F E R F E H F F E T Y D L L N T S T I L N L N D L N I F S . . . . . . 72022 GAATAAACAAAAAATAGAGGATGTGTGAAATACACTCGCTGACATGTCAATTTGACCAAT E - T K N R G C V K Y T R - H V N L T N N K Q K I E D V - N T L A D M S I - P M R I N K K - R M C E I H S L T C Q F D Q . . . . . . 71962 GAAATAATGACATGTGTTATTTTTAATCCAAAAAATTATTTACACATTATATTATAAAGT E I M T C V I F N P K N Y L H I I L - S K - - H V L F L I Q K I I Y T L Y Y K V - N N D M C Y F - S K K L F T H Y I I K . . . . . . 71902 AAAAAAAATAAAAATTATTTTAAAGTAAAAAAATGAAAAAAAAAGTAAAACCTAAACTTC K K N K N Y F K V K K - K K K - N L N F K K I K I I L K - K N E K K S K T - T S - K K - K L F - S K K M K K K V K P K L . . . . . . 71842 CCTGCCTTCAACTGGAACAAAACATACATTTCCCCTAACTCCATTAATGGCTACCCTCCC P A F N W N K T Y I S P N S I N G Y P P L P S T G T K H T F P L T P L M A T L P P C L Q L E Q N I H F P - L H - W L P S . . . . . . 71782 CTCCCTATACGGTTCCATCTTTAATCCGACAATTTTTTTTTCATCAGCTTTTTTATTAAT L P I R F H L - S D N F F F I S F F I N S L Y G S I F N P T I F F S S A F L L I P P Y T V P S L I R Q F F F H Q L F Y - . . . . . . 71722 TATAACTTTTTACTTCATCTCGTTTTTTAGGTAGAGAAAGAATGGGAAAAGAATCTCTTC Y N F L L H L V F - V E K E W E K N L F I T F Y F I S F F R - R K N G K R I S S L - L F T S S R F L G R E R M G K E S L . . . . . . 71662 AAAAAATTTATAAATGAAACAAAATGCTAAGAATTTTGAAACCATTAGAATGGTGGGGGA K K F I N E T K C - E F - N H - N G G G K N L - M K Q N A K N F E T I R M V G E Q K I Y K - N K M L R I L K P L E W W G . . . . . . 71602 AGAATATAACCACTGATACTAAGAATTTTGAAATCATTAGAATGATGGGGGAAGAAGATA R I - P L I L R I L K S L E - W G K K I E Y N H - Y - E F - N H - N D G G R R - K N I T T D T K N F E I I R M M G E E D . . . . 71542 ACCACTGGTGTATGGGTATGGGGGTTGGGTTGGG T T G V W V W G L G W P L V Y G Y G G W V G N H W C M G M G V G L Maximal non-overlapping open reading frames (>= 64 codons): none ... finished at: Mon Aug 28 23:13:19 2006