GeneSeqer. Version of March 12, 2006. Date run: Mon Aug 28 22:45:48 2006 (Bayesian) Splice site model (species): Arabidopsis thaliana Fast search parameters: MinMatchLen 16, MinQualityHSP 30, MinQualityCHAIN 50. Total number of ESTs: 175665 Total sequence length: 93213537 Minimum sequence length: 89 Maximum sequence length: 1082 Length distribution (number of sequences of specified length): < 100: 1 < 200: 2188 < 300: 8544 < 400: 20465 < 500: 39499 < 600: 49432 < 700: 32872 < 800: 19308 < 900: 3155 < 1000: 193 >=1000: 8 Input file : /tmp/bac-submission-temp-wSizq/C08HBa0336I24/C08HBa0336I24.seq.screen ________________________________________________________________________________ Sequence 1: C08HBa0336I24.1, from 1 to 142182, both strands analyzed. ... started at: Mon Aug 28 23:07:03 2006 EST library file: /tmp/cxgn-bacpublish-resources-xn6P6z/sgn_ests; matching gDNA +strand ... ... found all matches, elapsed seconds = 6 ... matches indexed, elapsed seconds = 6 HitsTableSize = 58 EST library file: /tmp/cxgn-bacpublish-resources-xn6P6z/sgn_ests; matching gDNA -strand ... ... found all matches, elapsed seconds = 5 ... matches indexed, elapsed seconds = 5 HitsTableSize = 311 ******************************************************************************** EST sequence 357 +strand 648 n (File: SGN-E347282+) 1 TTTAAACAAC AAGCTAATAT TCATTGTGCT TATTGTAACG GTGCTTATAA AATTGGTGGT 61 AAAGAATTGC AAGTTCATTT CTCGTGGCTT TTCTTTCCGT TCCATAGATG GTACTTGTAC 121 TTTTACGAAA GGATATTGGG GTCACTTATT AATGATCCAA CTTTTGCTTT ACCTTACTGG 181 AATTGGGATC ATCCAAAAGG TATGCGTATA CCTCCCATGT TTGATCGTGA GGGTTCATCT 241 CTTTACGATG AAAATCGTAA CCCTTACCGC GTGAAAGTCC GTGATTGTTT GGATAGTAAA 301 AAAATGGGAT TCGATTACGC GCCAATGCCC ACTCCATGGC GTAATTTCAA ACCAATCAGA 361 AGGTCATCAT CAGGAAAAGT GAATACAGCG TCAATTGCAC CAGTTAGCAA GGTGTTCCCA 421 CTGGCCAAGC TGGACCGTGC GATTTCGTTC TCGATCACGC GGCCAGCTTC GTCAAGGACA 481 ACACAAGAGA AAAATGAGCA GGAGGAGATT CTGACATTCA ATAAAATGGC ATATGATGAT 541 ACGAAGTATG TAAAGTTCGA ATGTGTTTTT GAACCGTGAC AAGACTGTGA ATGCAGAAGA 601 ACTTGATAAG GCGGAGTTTG CGGGGAGTTA TACTAGCTTG CCTCATGT Predicted gene structure (within gDNA segment 6602 to 4317): Exon 1 6002 5757 ( 246 n); cDNA 1 246 ( 246 n); score: 1.000 Intron 1 5756 5328 ( 429 n); Pd: 0.000 (s: 1.00), Pa: 0.000 (s: 1.00) Exon 2 5327 4927 ( 401 n); cDNA 247 648 ( 402 n); score: 0.984 MATCH C08HBa0336I24.1- SGN-E347282+ 0.990 647 0.998 C PGS_C08HBa0336I24.1-_SGN-E347282+ (6002 5757,5327 4927) Alignment (genomic DNA sequence = upper lines): TTTAAACAAC AAGCTAATAT TCATTGTGCT TATTGTAACG GTGCTTATAA AATTGGTGGT 5943 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTAAACAAC AAGCTAATAT TCATTGTGCT TATTGTAACG GTGCTTATAA AATTGGTGGT 60 AAAGAATTGC AAGTTCATTT CTCGTGGCTT TTCTTTCCGT TCCATAGATG GTACTTGTAC 5883 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGAATTGC AAGTTCATTT CTCGTGGCTT TTCTTTCCGT TCCATAGATG GTACTTGTAC 120 TTTTACGAAA GGATATTGGG GTCACTTATT AATGATCCAA CTTTTGCTTT ACCTTACTGG 5823 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTACGAAA GGATATTGGG GTCACTTATT AATGATCCAA CTTTTGCTTT ACCTTACTGG 180 AATTGGGATC ATCCAAAAGG TATGCGTATA CCTCCCATGT TTGATCGTGA GGGTTCATCT 5763 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTGGGATC ATCCAAAAGG TATGCGTATA CCTCCCATGT TTGATCGTGA GGGTTCATCT 240 CTTTACGATG AGAAACGTAA CCAAAATCAT CGCAATGGAA CTATTATTGA TCTTGGTCAT 5703 |||||| CTTTAC.... .......... .......... .......... .......... .......... 246 TTTGGTAAGG ACGTCGAAAC ACCTCAGCTA CAGATAATGA CTAATAATTT AACACTAATG 5643 .......... .......... .......... .......... .......... .......... 246 TACCGTCAAA TGGTTACTAA TGCTCCTTGC CCGTCTCAAT TCTTCGGTGC TGCTTACCCT 5583 .......... .......... .......... .......... .......... .......... 246 CTGGGTTCTG ATCCAGAACC AGGCATGGGT ACTATTGAGA ATATTCCTCA TACACCGGTC 5523 .......... .......... .......... .......... .......... .......... 246 CATATCTGGA CCGGTGATAG TCCTAGACAA GGACACGGTG AAGACATGGG TAATTTCTAT 5463 .......... .......... .......... .......... .......... .......... 246 TCAGCTGGTT TAGACCCGCT TTTCTACTGT CACCATGCTA ATGTGGACAG GATGTGGAAC 5403 .......... .......... .......... .......... .......... .......... 246 GAGTGGAAAT TAATTGGCGG GAAAAGAAGG GATTTATCAA ATAAAGATTG GTTGAACTCT 5343 .......... .......... .......... .......... .......... .......... 246 GAATTCTTTT TCTACGATGA AAATCGTAAC CCTTACCGCG TGAAAGTCCG TGATTGTTTG 5283 ||||| |||||||||| |||||||||| |||||||||| |||||||||| .......... .....GATGA AAATCGTAAC CCTTACCGCG TGAAAGTCCG TGATTGTTTG 291 GATAGTAAAA AAATGGGATT CGATTACGCG CCAATGCCCA CTCCATGGCG TAATTTCAAA 5223 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAGTAAAA AAATGGGATT CGATTACGCG CCAATGCCCA CTCCATGGCG TAATTTCAAA 351 CCAATCAGAA GGTCATCATC AGGAAAAGTG AATACAGCGT CAATTGCACC AGTTAGCAAG 5163 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAATCAGAA GGTCATCATC AGGAAAAGTG AATACAGCGT CAATTGCACC AGTTAGCAAG 411 GTGTTCCCAC TGGCCAAGCT GGACCGTGCG ATTTCGTTCT CGATCACGCG GCCAGCTTCG 5103 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGTTCCCAC TGGCCAAGCT GGACCGTGCG ATTTCGTTCT CGATCACGCG GCCAGCTTCG 471 TCAAGGACAA CACAAGAGAA AAATGAGCAG GAGGAGATTC TGACATTCAA TAAAATGGCA 5043 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAGGACAA CACAAGAGAA AAATGAGCAG GAGGAGATTC TGACATTCAA TAAAATGGCA 531 TATGATGATA CGAAGTATGT AAGGTTCG-A TGTGTTTTTG AACGTGGACA AGACTGTGAA 4984 |||||||||| |||||||||| || ||||| | |||||||||| ||| |||| |||||||||| TATGATGATA CGAAGTATGT AAAGTTCGAA TGTGTTTTTG AACCGTGACA AGACTGTGAA 591 TGCAGAAGAA CTTGATAAGG CGGAGTTTGC GGGGAGTTAT ACTAGCTTGC CTCATGT 4927 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| TGCAGAAGAA CTTGATAAGG CGGAGTTTGC GGGGAGTTAT ACTAGCTTGC CTCATGT 648 hqPGS_C08HBa0336I24.1-_SGN-E347282+ (6002 5757,5327 4927) ******************************************************************************** EST sequence 351 +strand 411 n (File: SGN-E313009+) 1 AGGACACGGT GAAGACATGG GTAATTTCTA TTCAGCTGGT TTAGACCCGC TTTTCTACTG 61 TCACCATGCT AATGTGGACA GGATGTGGAA CGAGTGGAAA TTAATTGGCG GGAAAAGAAG 121 GGATTTATCA AATAAAGATT GGTTGAACTC TGAATTCTTT TTCTACGATG AAAATCGTAA 181 CCCTTACCGC GTGAAAGTCC GTGATTGTTT GGATAGTAAA AAAATGGGAT TCGATTACGC 241 GCCAATGCCC ACTCCATGGC GTAATTTCAA ACCAATCAGA AGGTGTTCCC ACTGGCCAAG 301 CTGGACCGTG CGATTTCGTT CTCGATCACG CGGCCAGCTT CGTCAAGGAC AACACAAGAG 361 AAAAATGAGC AGGAGGAGAT TCTGACATTC AATAAAATGG CATATGATGA T Predicted gene structure (within gDNA segment 6093 to 4424): Exon 1 5493 5212 ( 282 n); cDNA 1 282 ( 282 n); score: 1.000 Intron 1 5211 5163 ( 49 n); Pd: 0.000 (s: 1.00), Pa: 0.000 (s: 1.00) Exon 2 5162 5034 ( 129 n); cDNA 283 411 ( 129 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E313009+ 1.000 411 1.000 C PGS_C08HBa0336I24.1-_SGN-E313009+ (5493 5212,5162 5034) Alignment (genomic DNA sequence = upper lines): AGGACACGGT GAAGACATGG GTAATTTCTA TTCAGCTGGT TTAGACCCGC TTTTCTACTG 5434 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGACACGGT GAAGACATGG GTAATTTCTA TTCAGCTGGT TTAGACCCGC TTTTCTACTG 60 TCACCATGCT AATGTGGACA GGATGTGGAA CGAGTGGAAA TTAATTGGCG GGAAAAGAAG 5374 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACCATGCT AATGTGGACA GGATGTGGAA CGAGTGGAAA TTAATTGGCG GGAAAAGAAG 120 GGATTTATCA AATAAAGATT GGTTGAACTC TGAATTCTTT TTCTACGATG AAAATCGTAA 5314 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGATTTATCA AATAAAGATT GGTTGAACTC TGAATTCTTT TTCTACGATG AAAATCGTAA 180 CCCTTACCGC GTGAAAGTCC GTGATTGTTT GGATAGTAAA AAAATGGGAT TCGATTACGC 5254 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCTTACCGC GTGAAAGTCC GTGATTGTTT GGATAGTAAA AAAATGGGAT TCGATTACGC 240 GCCAATGCCC ACTCCATGGC GTAATTTCAA ACCAATCAGA AGGTCATCAT CAGGAAAAGT 5194 |||||||||| |||||||||| |||||||||| |||||||||| || GCCAATGCCC ACTCCATGGC GTAATTTCAA ACCAATCAGA AG........ .......... 282 GAATACAGCG TCAATTGCAC CAGTTAGCAA GGTGTTCCCA CTGGCCAAGC TGGACCGTGC 5134 ||||||||| |||||||||| |||||||||| .......... .......... .......... .GTGTTCCCA CTGGCCAAGC TGGACCGTGC 311 GATTTCGTTC TCGATCACGC GGCCAGCTTC GTCAAGGACA ACACAAGAGA AAAATGAGCA 5074 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATTTCGTTC TCGATCACGC GGCCAGCTTC GTCAAGGACA ACACAAGAGA AAAATGAGCA 371 GGAGGAGATT CTGACATTCA ATAAAATGGC ATATGATGAT 5034 |||||||||| |||||||||| |||||||||| |||||||||| GGAGGAGATT CTGACATTCA ATAAAATGGC ATATGATGAT 411 hqPGS_C08HBa0336I24.1-_SGN-E313009+ (5493 5212,5162 5034) ******************************************************************************** EST sequence 23 -strand 474 n (File: SGN-E216655-) 1 TGTGTTTTTG AACGTGGACA AGACTGTGAA TGCAGAAGAA CTTGATAAGG CGGAGTTTGC 61 GGGGAGTTAT ACTAGCTTGC CTCATGTTCA TGGAAATAAT GATAATCATG TTAAGGATGT 121 TACTTTTACG CTGGCGATAA CTGAACTGTT GGAGGATATT GGATTGGAAG ATGAAGATAC 181 AATTGCGGTA ACTTTGGTTC CAAAAGTTGG TGGTGAAGGT GTATCCATTG AAAGTGTGGA 241 GATCAAGCTT GAGGATTGTT AAAGCCTTCA TGAGTTGGTG GCTATGGTGC CAAATTTTAT 301 GTTTAATTAG TTTAATTGTG TGTGGTTTGG TTATGTTTAT GTTATGTTAA AATGAAATGT 361 ATCAGCTGGA TAGCTCATTA CTGCCTTGCT AGTTTTGTTG ATGCTATCTA TGAAATAAAA 421 AACCAAATGG TTGTCTTTCA TTTAATTTTA TGTCAAAAAA AAAAAAAAAA AAAA Predicted gene structure (within gDNA segment 5623 to 3769): Exon 1 5013 4560 ( 454 n); cDNA 1 454 ( 454 n); score: 0.996 PPA cDNA 455 474 MATCH C08HBa0336I24.1- SGN-E216655- 0.996 454 0.958 C PGS_C08HBa0336I24.1-_SGN-E216655- (5013 4560) Alignment (genomic DNA sequence = upper lines): TGTGTTTTTG AACGTGGACA AGACTGTGAA TGCAGAAGAA CTTGATAAGG CGGAGTTTGC 4954 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGTTTTTG AACGTGGACA AGACTGTGAA TGCAGAAGAA CTTGATAAGG CGGAGTTTGC 60 GGGGAGTTAT ACTAGCTTGC CTCATGTTCA TGGAAATAAT GATAATCATG TTAAGGATGT 4894 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGGAGTTAT ACTAGCTTGC CTCATGTTCA TGGAAATAAT GATAATCATG TTAAGGATGT 120 TACTTTTACG CTGGCGATAA CTGAACTGTT GGAGGATATT GGATTGGAAG ATGAAGATAC 4834 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACTTTTACG CTGGCGATAA CTGAACTGTT GGAGGATATT GGATTGGAAG ATGAAGATAC 180 AATTGCGGTA ACTTTGGTTC CAAAAGTTGG TGGTGAAGGT GTATCCATTG AAAGTGTGGA 4774 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTGCGGTA ACTTTGGTTC CAAAAGTTGG TGGTGAAGGT GTATCCATTG AAAGTGTGGA 240 GATCAAGCTT GAGGATTGTT AAAGCCTTCA TGAGTTGGTG GCTATGGTGC CAAATTTTAT 4714 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATCAAGCTT GAGGATTGTT AAAGCCTTCA TGAGTTGGTG GCTATGGTGC CAAATTTTAT 300 GTTTAATTAG TTTAATTGTG TGTGGTTTGG TTATGTTTAT GTTATGTTAA AATGAAATGT 4654 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTAATTAG TTTAATTGTG TGTGGTTTGG TTATGTTTAT GTTATGTTAA AATGAAATGT 360 ATCAGCTGGA TAGCTCATTA CTGCCTTGCT AGTTTTGTTG ATGCTATCTA TGAAATAAAA 4594 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCAGCTGGA TAGCTCATTA CTGCCTTGCT AGTTTTGTTG ATGCTATCTA TGAAATAAAA 420 AAATAAATGG TTGTCTTTCA TTTAATTTTA TGTC 4560 || |||||| |||||||||| |||||||||| |||| AACCAAATGG TTGTCTTTCA TTTAATTTTA TGTC 454 hqPGS_C08HBa0336I24.1-_SGN-E216655- (5013 4560) ******************************************************************************** EST sequence 46 -strand 767 n (File: SGN-E320453-) 1 AAAGTCCGTG CTTGTTTGGA TAGTAAAAAA ATGGGATTGG ATTACGCGCC AATGCCCACT 61 CCATGGCGTA ATTTCAAACC AATCAGAAGG TCATCATCAG GAAAAGTGAA TACAGCGTCA 121 ATTGCACCAG TTAGCAAGGT GTTCCCACTG GCCAAGCTGG ACCGTGCGAT TTCGTTCTCG 181 ATCACGCGGC CAGCTTCGTC AAGGACAACA CAAGAGAAAA ATGAGCAGGA GGAGATTCTG 241 ACATTCAATA AAATGGCATA TGATGATACG AAGTATGTAA GGTTCGATGT GTTTTTGAAC 301 GTGGACAAGC CTGTGAATGC AGAAGAACTT GATAAGGCGG AGTTTGCGGG GAGTTATACT 361 AGCTTGCCTC ATGTTCATGG AAATAATGAT AATCATGTTA AGGATGTTAC TTTTACGCTG 421 GCGATAACTG AACTGTTGGA GGATATTGGA TTGGAAGATG AAGATACAAT TGCGGTAACT 481 TTGGTTCCAA AAGTTGGTGG TGAAGGTGTA TCCATTGAAA GTGTGGAGAT CAAGCTTGAG 541 GATTGTTAAA GCCTTCATGA GTTGGTGGCT ATGGTGCCAA ATTTTATGTT TAATTAGTTT 601 AATTGTGTGT GGTTTGGTTA TGTTTATGTT ATGTTAAAAT GAAATGTATC AGCTGGATAG 661 CTCATTACTG CCTTGCTAGT TTTGTTGATG CTATCTATGA AATAAAAAAA TAAATGGTTG 721 TCTTTCATTT AAAAAAAAAA AAAAAAAAAA ACTCGAGACT AGTTCTC Predicted gene structure (within gDNA segment 6009 to 3619): Exon 1 5300 4570 ( 731 n); cDNA 1 731 ( 731 n); score: 0.996 PPA cDNA 732 752 MATCH C08HBa0336I24.1- SGN-E320453- 0.996 731 0.953 C PGS_C08HBa0336I24.1-_SGN-E320453- (5300 4570) Alignment (genomic DNA sequence = upper lines): AAAGTCCGTG ATTGTTTGGA TAGTAAAAAA ATGGGATTCG ATTACGCGCC AATGCCCACT 5241 |||||||||| ||||||||| |||||||||| |||||||| | |||||||||| |||||||||| AAAGTCCGTG CTTGTTTGGA TAGTAAAAAA ATGGGATTGG ATTACGCGCC AATGCCCACT 60 CCATGGCGTA ATTTCAAACC AATCAGAAGG TCATCATCAG GAAAAGTGAA TACAGCGTCA 5181 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATGGCGTA ATTTCAAACC AATCAGAAGG TCATCATCAG GAAAAGTGAA TACAGCGTCA 120 ATTGCACCAG TTAGCAAGGT GTTCCCACTG GCCAAGCTGG ACCGTGCGAT TTCGTTCTCG 5121 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGCACCAG TTAGCAAGGT GTTCCCACTG GCCAAGCTGG ACCGTGCGAT TTCGTTCTCG 180 ATCACGCGGC CAGCTTCGTC AAGGACAACA CAAGAGAAAA ATGAGCAGGA GGAGATTCTG 5061 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCACGCGGC CAGCTTCGTC AAGGACAACA CAAGAGAAAA ATGAGCAGGA GGAGATTCTG 240 ACATTCAATA AAATGGCATA TGATGATACG AAGTATGTAA GGTTCGATGT GTTTTTGAAC 5001 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATTCAATA AAATGGCATA TGATGATACG AAGTATGTAA GGTTCGATGT GTTTTTGAAC 300 GTGGACAAGA CTGTGAATGC AGAAGAACTT GATAAGGCGG AGTTTGCGGG GAGTTATACT 4941 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGGACAAGC CTGTGAATGC AGAAGAACTT GATAAGGCGG AGTTTGCGGG GAGTTATACT 360 AGCTTGCCTC ATGTTCATGG AAATAATGAT AATCATGTTA AGGATGTTAC TTTTACGCTG 4881 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCTTGCCTC ATGTTCATGG AAATAATGAT AATCATGTTA AGGATGTTAC TTTTACGCTG 420 GCGATAACTG AACTGTTGGA GGATATTGGA TTGGAAGATG AAGATACAAT TGCGGTAACT 4821 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGATAACTG AACTGTTGGA GGATATTGGA TTGGAAGATG AAGATACAAT TGCGGTAACT 480 TTGGTTCCAA AAGTTGGTGG TGAAGGTGTA TCCATTGAAA GTGTGGAGAT CAAGCTTGAG 4761 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGTTCCAA AAGTTGGTGG TGAAGGTGTA TCCATTGAAA GTGTGGAGAT CAAGCTTGAG 540 GATTGTTAAA GCCTTCATGA GTTGGTGGCT ATGGTGCCAA ATTTTATGTT TAATTAGTTT 4701 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATTGTTAAA GCCTTCATGA GTTGGTGGCT ATGGTGCCAA ATTTTATGTT TAATTAGTTT 600 AATTGTGTGT GGTTTGGTTA TGTTTATGTT ATGTTAAAAT GAAATGTATC AGCTGGATAG 4641 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTGTGTGT GGTTTGGTTA TGTTTATGTT ATGTTAAAAT GAAATGTATC AGCTGGATAG 660 CTCATTACTG CCTTGCTAGT TTTGTTGATG CTATCTATGA AATAAAAAAA TAAATGGTTG 4581 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCATTACTG CCTTGCTAGT TTTGTTGATG CTATCTATGA AATAAAAAAA TAAATGGTTG 720 TCTTTCATTT A 4570 |||||||||| | TCTTTCATTT A 731 hqPGS_C08HBa0336I24.1-_SGN-E320453- (5300 4570) ******************************************************************************** EST sequence 12 -strand 568 n (File: SGN-E203308-) 1 AAAAAAACTC GGACTAGTTC TCCTCGTGCC GAATTCGGCA CGAGAGAACT AGGAGATTCT 61 GACATTCAAT AAAATGGCAT ATGATGATAC GAAGTATGTA AGGTTCGATG TGTTTTTGAA 121 CGTGGACAAG ACTGTGAATG CAGAAGAACT TGATAAGGCG GAGTTTGCGG GGAGTTATAC 181 TAGCTTGCCT CATGTTCATG GAAATAATGA TAATCATGTT AAGGATGTTA CTTTTACGCT 241 GGCGATAACT GAACTGTTGG AGGATATTGG ATTGGAAGAT GAAGATACAA TTGCGGTAAC 301 TTTGGTTCCA AAAGTTGGTG GTGAAGGTGT ATCCATTGAA AGTGTGGAGA TCAAGCTTGA 361 GGATTGTTAA AGCCTTCATG AGTTGGTGGC TATGGTGCCA AATTTTATGT TTAATTAGTT 421 TAATTGTGTG TGGTTTGGTT ATGTTTATGT TATGTTAAAA TGAAATGTAT CAGCTGGATA 481 GCTCATTACT GCCTTGCTAG TTTTGTTGAT GCTATCTATG AAATAAAAAA ATAAATGGTT 541 GTCTTTCATT TAAAAAAAAA AAAAAAAA Predicted gene structure (within gDNA segment 6181 to 3819): Exon 1 5069 4570 ( 500 n); cDNA 53 552 ( 500 n); score: 1.000 PPA cDNA 553 568 MATCH C08HBa0336I24.1- SGN-E203308- 1.000 500 0.880 C PGS_C08HBa0336I24.1-_SGN-E203308- (5069 4570) Alignment (genomic DNA sequence = upper lines): GAGATTCTGA CATTCAATAA AATGGCATAT GATGATACGA AGTATGTAAG GTTCGATGTG 5010 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGATTCTGA CATTCAATAA AATGGCATAT GATGATACGA AGTATGTAAG GTTCGATGTG 112 TTTTTGAACG TGGACAAGAC TGTGAATGCA GAAGAACTTG ATAAGGCGGA GTTTGCGGGG 4950 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTTGAACG TGGACAAGAC TGTGAATGCA GAAGAACTTG ATAAGGCGGA GTTTGCGGGG 172 AGTTATACTA GCTTGCCTCA TGTTCATGGA AATAATGATA ATCATGTTAA GGATGTTACT 4890 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTATACTA GCTTGCCTCA TGTTCATGGA AATAATGATA ATCATGTTAA GGATGTTACT 232 TTTACGCTGG CGATAACTGA ACTGTTGGAG GATATTGGAT TGGAAGATGA AGATACAATT 4830 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTACGCTGG CGATAACTGA ACTGTTGGAG GATATTGGAT TGGAAGATGA AGATACAATT 292 GCGGTAACTT TGGTTCCAAA AGTTGGTGGT GAAGGTGTAT CCATTGAAAG TGTGGAGATC 4770 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGGTAACTT TGGTTCCAAA AGTTGGTGGT GAAGGTGTAT CCATTGAAAG TGTGGAGATC 352 AAGCTTGAGG ATTGTTAAAG CCTTCATGAG TTGGTGGCTA TGGTGCCAAA TTTTATGTTT 4710 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGCTTGAGG ATTGTTAAAG CCTTCATGAG TTGGTGGCTA TGGTGCCAAA TTTTATGTTT 412 AATTAGTTTA ATTGTGTGTG GTTTGGTTAT GTTTATGTTA TGTTAAAATG AAATGTATCA 4650 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTAGTTTA ATTGTGTGTG GTTTGGTTAT GTTTATGTTA TGTTAAAATG AAATGTATCA 472 GCTGGATAGC TCATTACTGC CTTGCTAGTT TTGTTGATGC TATCTATGAA ATAAAAAAAT 4590 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTGGATAGC TCATTACTGC CTTGCTAGTT TTGTTGATGC TATCTATGAA ATAAAAAAAT 532 AAATGGTTGT CTTTCATTTA 4570 |||||||||| |||||||||| AAATGGTTGT CTTTCATTTA 552 hqPGS_C08HBa0336I24.1-_SGN-E203308- (5069 4570) ******************************************************************************** EST sequence 52 -strand 411 n (File: SGN-E221730-) 1 AGTTTGCGGG GAGTTATACT AGCTTGCCTC ATGTTCATGG AAATAATGAT AATCATGTTA 61 AGGATGTTAC TTTTACGCTG GCGATAACTG AACTGTTGGA GGATATTGGA TTGGAAGATG 121 AAGATACAAT TGCGGTAACT TTGGTTCCAA AAGTTGGTGG TGAAGGTGTA TCCATTGAAA 181 GTGTGGAGAT CAAGCTTGAG GATTGTTAAA GCCTTCATGA GTTGGTGGCT ATGGTGCCAA 241 ATTTTATGTT TAATTAGTTT AATTGTGTGT GGTTTGGTTA TGTTTATGTT ATGTTAAAAT 301 GAAATGTATC AGCTGGATAG CTCATTACTG CCTTGCTAGT TTTGTTGATG CTATCTATGA 361 AATACCACAA TAAATGGTTG TCTTTCATTT AAAAAAAAAA AAAAAAAAAA A Predicted gene structure (within gDNA segment 5570 to 3527): Exon 1 4960 4570 ( 391 n); cDNA 1 391 ( 391 n); score: 0.992 PPA cDNA 392 411 MATCH C08HBa0336I24.1- SGN-E221730- 0.992 391 0.951 C PGS_C08HBa0336I24.1-_SGN-E221730- (4960 4570) Alignment (genomic DNA sequence = upper lines): AGTTTGCGGG GAGTTATACT AGCTTGCCTC ATGTTCATGG AAATAATGAT AATCATGTTA 4901 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTTGCGGG GAGTTATACT AGCTTGCCTC ATGTTCATGG AAATAATGAT AATCATGTTA 60 AGGATGTTAC TTTTACGCTG GCGATAACTG AACTGTTGGA GGATATTGGA TTGGAAGATG 4841 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGATGTTAC TTTTACGCTG GCGATAACTG AACTGTTGGA GGATATTGGA TTGGAAGATG 120 AAGATACAAT TGCGGTAACT TTGGTTCCAA AAGTTGGTGG TGAAGGTGTA TCCATTGAAA 4781 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGATACAAT TGCGGTAACT TTGGTTCCAA AAGTTGGTGG TGAAGGTGTA TCCATTGAAA 180 GTGTGGAGAT CAAGCTTGAG GATTGTTAAA GCCTTCATGA GTTGGTGGCT ATGGTGCCAA 4721 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGTGGAGAT CAAGCTTGAG GATTGTTAAA GCCTTCATGA GTTGGTGGCT ATGGTGCCAA 240 ATTTTATGTT TAATTAGTTT AATTGTGTGT GGTTTGGTTA TGTTTATGTT ATGTTAAAAT 4661 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTTATGTT TAATTAGTTT AATTGTGTGT GGTTTGGTTA TGTTTATGTT ATGTTAAAAT 300 GAAATGTATC AGCTGGATAG CTCATTACTG CCTTGCTAGT TTTGTTGATG CTATCTATGA 4601 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAATGTATC AGCTGGATAG CTCATTACTG CCTTGCTAGT TTTGTTGATG CTATCTATGA 360 AATAAAAAAA TAAATGGTTG TCTTTCATTT A 4570 |||| | || |||||||||| |||||||||| | AATACCACAA TAAATGGTTG TCTTTCATTT A 391 hqPGS_C08HBa0336I24.1-_SGN-E221730- (4960 4570) ******************************************************************************** EST sequence 31 -strand 712 n (File: SGN-E317782-) 1 GATAGTAAAA AAATGGGATT CGATTACGCG CCAATGCCCA CTCCCATGGC GTAATTCAAA 61 CCCAATCAGA AGGTCATCAT CAGGAAAAGT GAATACAGCG TCAATTGCAC CAGTTAGCAA 121 GGTGTTCCCA CTGGCCAAGC TGGACCGTGC GATTTCGTTC TCGATCACGC GGCCAGCTTC 181 GTCAAGGACA ACACAAGAGA AAAATGAGCA GGAGGAGATT CTGACATTCA ATAAAATGGC 241 ATATGATGAT ACGAAGTATG TAAGGTTCGA TGTGTTTTTG AACGTGGACA AGACTGTGAA 301 TGCAGAAGAA CTTGATAAGG CGGAGTTTGC GGGGAGTTAT ACTAGCTTGC CTCATGTTCA 361 TGGAAATAAT GATAATCATG TTAAGGATGT TACTTTTACG CTGGCGATAA CTGAACTGTT 421 GGAGGATATT GGATTGGAAG ATGAAGATAC AATTGCGGTA ACTTTGGTTC CAAAAGTTGG 481 TGGTGAAGGT GTATCCATTG AAAGTGTGGA GATCAAGCTT GAGGATTGTT AAAGCCTTCA 541 TGAGTTGGTG GCTATGGTGC CAAATTTTAT GTTTAATTAG TTTAATTGTG TGTGGTTTGG 601 TTATGTTTAT GTTATGTTAA AATGAAATGT ATCAGCTGGA TAGCTCATTA CTGCCTTGCT 661 AGTTTTGTTG ATGCTATCTA TGAAATAAAA AAATAAATGG TTGTCTTTCA AA Predicted gene structure (within gDNA segment 5892 to 3954): Exon 1 5282 4574 ( 709 n); cDNA 1 710 ( 710 n); score: 0.992 MATCH C08HBa0336I24.1- SGN-E317782- 0.992 709 0.996 C PGS_C08HBa0336I24.1-_SGN-E317782- (5282 4574) Alignment (genomic DNA sequence = upper lines): GATAGTAAAA AAATGGGATT CGATTACGCG CCAATGCCCA CT-CCATGGC GTAATTTCAA 5224 |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| |||||| || GATAGTAAAA AAATGGGATT CGATTACGCG CCAATGCCCA CTCCCATGGC GTAATTCAAA 60 ACCAATCAGA AGGTCATCAT CAGGAAAAGT GAATACAGCG TCAATTGCAC CAGTTAGCAA 5164 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCAATCAGA AGGTCATCAT CAGGAAAAGT GAATACAGCG TCAATTGCAC CAGTTAGCAA 120 GGTGTTCCCA CTGGCCAAGC TGGACCGTGC GATTTCGTTC TCGATCACGC GGCCAGCTTC 5104 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGTTCCCA CTGGCCAAGC TGGACCGTGC GATTTCGTTC TCGATCACGC GGCCAGCTTC 180 GTCAAGGACA ACACAAGAGA AAAATGAGCA GGAGGAGATT CTGACATTCA ATAAAATGGC 5044 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCAAGGACA ACACAAGAGA AAAATGAGCA GGAGGAGATT CTGACATTCA ATAAAATGGC 240 ATATGATGAT ACGAAGTATG TAAGGTTCGA TGTGTTTTTG AACGTGGACA AGACTGTGAA 4984 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATGATGAT ACGAAGTATG TAAGGTTCGA TGTGTTTTTG AACGTGGACA AGACTGTGAA 300 TGCAGAAGAA CTTGATAAGG CGGAGTTTGC GGGGAGTTAT ACTAGCTTGC CTCATGTTCA 4924 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCAGAAGAA CTTGATAAGG CGGAGTTTGC GGGGAGTTAT ACTAGCTTGC CTCATGTTCA 360 TGGAAATAAT GATAATCATG TTAAGGATGT TACTTTTACG CTGGCGATAA CTGAACTGTT 4864 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGAAATAAT GATAATCATG TTAAGGATGT TACTTTTACG CTGGCGATAA CTGAACTGTT 420 GGAGGATATT GGATTGGAAG ATGAAGATAC AATTGCGGTA ACTTTGGTTC CAAAAGTTGG 4804 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAGGATATT GGATTGGAAG ATGAAGATAC AATTGCGGTA ACTTTGGTTC CAAAAGTTGG 480 TGGTGAAGGT GTATCCATTG AAAGTGTGGA GATCAAGCTT GAGGATTGTT AAAGCCTTCA 4744 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTGAAGGT GTATCCATTG AAAGTGTGGA GATCAAGCTT GAGGATTGTT AAAGCCTTCA 540 TGAGTTGGTG GCTATGGTGC CAAATTTTAT GTTTAATTAG TTTAATTGTG TGTGGTTTGG 4684 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAGTTGGTG GCTATGGTGC CAAATTTTAT GTTTAATTAG TTTAATTGTG TGTGGTTTGG 600 TTATGTTTAT GTTATGTTAA AATGAAATGT ATCAGCTGGA TAGCTCATTA CTGCCTTGCT 4624 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTATGTTTAT GTTATGTTAA AATGAAATGT ATCAGCTGGA TAGCTCATTA CTGCCTTGCT 660 AGTTTTGTTG ATGCTATCTA TGAAATAAAA AAATAAATGG TTGTCTTTCA 4574 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTTTGTTG ATGCTATCTA TGAAATAAAA AAATAAATGG TTGTCTTTCA 710 hqPGS_C08HBa0336I24.1-_SGN-E317782- (5282 4574) ******************************************************************************** EST sequence 295 +strand 652 n (File: SGN-E378012+) 1 CCAATCAGAA GGTCATCATC AGGAAAAGTG AATACAGCGT CAATTGCACC AGTTAGCAAG 61 GTGTTCCCAC TGGCCAAGCT GGACCGTGCG ATTTCGTTCT CGATCACGCG GCCAGCTTCG 121 TCAAGGACAA CACAAGAGAA AAATGAGCAG GAGGAGATTC TGACATTCAA TAAAATGGCA 181 TATGATGATA CGAAGTATGT AAGGTTCGAT GTGTTTTTGA ACGTGGACAA GACTGTGAAT 241 GCAGAAGAAC TTGATAAGGC GGAGTTTGCG GGGAGTTATA CTAGCTTGCC TCATGTTCAT 301 GGAAATAATG ATAATCATGT TAAGGATGTT ACTTTTACGC TGGCGATAAC TGAACTGTTG 361 GAGGATATTG GATTGGAAGA TGAAGATACA ATTGCGGTAA CTTTGGTTCC AAAAGTTGGT 421 GGTGAAGGTG TATCCATTGA AAGTGTGGAG ATCAAGCTTG AGGATTGTTA AAGCCTTCAT 481 GAGTTGGTGG CTATGGTGCC AAATTTTATG TTTAATTAGT TTAATTGTGT GTGGTTTGGT 541 TATGTTTATG TTATGTTAAA ATGAAATGTA TCAGCTGGAT AGCTCATTAC TGCCTTGCTA 601 GTTTTGTTGA TGCTATCTAT GAAATAAAAA AAATAAATGG TTGTCTTTCA AA Predicted gene structure (within gDNA segment 5822 to 3944): Exon 1 5222 4574 ( 649 n); cDNA 1 650 ( 650 n); score: 0.996 MATCH C08HBa0336I24.1- SGN-E378012+ 0.996 649 0.995 C PGS_C08HBa0336I24.1-_SGN-E378012+ (5222 4574) Alignment (genomic DNA sequence = upper lines): CCAATCAGAA GGTCATCATC AGGAAAAGTG AATACAGCGT CAATTGCACC AGTTAGCAAG 5163 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAATCAGAA GGTCATCATC AGGAAAAGTG AATACAGCGT CAATTGCACC AGTTAGCAAG 60 GTGTTCCCAC TGGCCAAGCT GGACCGTGCG ATTTCGTTCT CGATCACGCG GCCAGCTTCG 5103 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGTTCCCAC TGGCCAAGCT GGACCGTGCG ATTTCGTTCT CGATCACGCG GCCAGCTTCG 120 TCAAGGACAA CACAAGAGAA AAATGAGCAG GAGGAGATTC TGACATTCAA TAAAATGGCA 5043 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAGGACAA CACAAGAGAA AAATGAGCAG GAGGAGATTC TGACATTCAA TAAAATGGCA 180 TATGATGATA CGAAGTATGT AAGGTTCGAT GTGTTTTTGA ACGTGGACAA GACTGTGAAT 4983 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATGATGATA CGAAGTATGT AAGGTTCGAT GTGTTTTTGA ACGTGGACAA GACTGTGAAT 240 GCAGAAGAAC TTGATAAGGC GGAGTTTGCG GGGAGTTATA CTAGCTTGCC TCATGTTCAT 4923 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGAAGAAC TTGATAAGGC GGAGTTTGCG GGGAGTTATA CTAGCTTGCC TCATGTTCAT 300 GGAAATAATG ATAATCATGT TAAGGATGTT ACTTTTACGC TGGCGATAAC TGAACTGTTG 4863 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAAATAATG ATAATCATGT TAAGGATGTT ACTTTTACGC TGGCGATAAC TGAACTGTTG 360 GAGGATATTG GATTGGAAGA TGAAGATACA ATTGCGGTAA CTTTGGTTCC AAAAGTTGGT 4803 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGGATATTG GATTGGAAGA TGAAGATACA ATTGCGGTAA CTTTGGTTCC AAAAGTTGGT 420 GGTGAAGGTG TATCCATTGA AAGTGTGGAG ATCAAGCTTG AGGATTGTTA AAGCCTTCAT 4743 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGAAGGTG TATCCATTGA AAGTGTGGAG ATCAAGCTTG AGGATTGTTA AAGCCTTCAT 480 GAGTTGGTGG CTATGGTGCC AAATTTTATG TTTAATTAGT TTAATTGTGT GTGGTTTGGT 4683 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGTTGGTGG CTATGGTGCC AAATTTTATG TTTAATTAGT TTAATTGTGT GTGGTTTGGT 540 TATGTTTATG TTATGTTAAA ATGAAATGTA TCAGCTGGAT AGCTCATTAC TGCCTTGCTA 4623 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATGTTTATG TTATGTTAAA ATGAAATGTA TCAGCTGGAT AGCTCATTAC TGCCTTGCTA 600 GTTTTGTTGA TGCTATCTAT GAAAT-AAAA AAATAAATGG TTGTCTTTCA 4574 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| GTTTTGTTGA TGCTATCTAT GAAATAAAAA AAATAAATGG TTGTCTTTCA 650 hqPGS_C08HBa0336I24.1-_SGN-E378012+ (5222 4574) ******************************************************************************** EST sequence 43 -strand 675 n (File: SGN-E378013-) 1 CCAATCAGAA GGTCATCATC AGGAAAAGTG AATACAGCGT CAATTGCACC AGTTAGCAAG 61 GTGTTCCCAC TGGCCAAGCT GGACCGTGCG ATTTCGTTCT CGATCACGCG GCCAGCTTCG 121 TCAAGGACAA CACAAGAGAA AAATGAGCAG GAGGAGATTC TGACATTCAA TAAAATGGCA 181 TATGATGATA CGAAGTATGT AAGGTTCGAT GTGTTTTTGA ACGTGGACAA GACTGTGAAT 241 GCAGAAGAAC TTGATAAGGC GGAGTTTGCG GGGAGTTATA CTAGCTTGCC TCATGTTCAT 301 GGAAATAATG ATAATCATGT TAAGGATGTT ACTTTTACGC TGGCGATAAC TGAACTGTTG 361 GAGGATATTG GATTGGAAGA TGAAGATACA ATTGCGGTAA CTTTGGTTCC AAAAGTTGGT 421 GGTGAAGGTG TATCCATTGA AAGTGTGGAG ATCAAGCTTG AGGATTGTTA AAGCCTTCAT 481 GAGTTGGTGG CTATGGTGCC AAATTTTATG TTTAATTAGT TTAATTGTGT GTGGTTTGGT 541 TATGTTTATG TTATGTTAAA ATGAAATGTA TCAGCTGGAT AGCTCATTAC TGCCTTGCTA 601 GTTTTGTTGA TGCTATCTAT GAAATAAAAA AATAAATGGT TGTCTTTCAA AAAAAAAAAA 661 AAAAAACTCG AACTA Predicted gene structure (within gDNA segment 5832 to 3714): Exon 1 5222 4575 ( 648 n); cDNA 1 648 ( 648 n); score: 1.000 PPA cDNA 649 667 MATCH C08HBa0336I24.1- SGN-E378013- 1.000 648 0.960 C PGS_C08HBa0336I24.1-_SGN-E378013- (5222 4575) Alignment (genomic DNA sequence = upper lines): CCAATCAGAA GGTCATCATC AGGAAAAGTG AATACAGCGT CAATTGCACC AGTTAGCAAG 5163 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAATCAGAA GGTCATCATC AGGAAAAGTG AATACAGCGT CAATTGCACC AGTTAGCAAG 60 GTGTTCCCAC TGGCCAAGCT GGACCGTGCG ATTTCGTTCT CGATCACGCG GCCAGCTTCG 5103 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGTTCCCAC TGGCCAAGCT GGACCGTGCG ATTTCGTTCT CGATCACGCG GCCAGCTTCG 120 TCAAGGACAA CACAAGAGAA AAATGAGCAG GAGGAGATTC TGACATTCAA TAAAATGGCA 5043 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAGGACAA CACAAGAGAA AAATGAGCAG GAGGAGATTC TGACATTCAA TAAAATGGCA 180 TATGATGATA CGAAGTATGT AAGGTTCGAT GTGTTTTTGA ACGTGGACAA GACTGTGAAT 4983 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATGATGATA CGAAGTATGT AAGGTTCGAT GTGTTTTTGA ACGTGGACAA GACTGTGAAT 240 GCAGAAGAAC TTGATAAGGC GGAGTTTGCG GGGAGTTATA CTAGCTTGCC TCATGTTCAT 4923 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGAAGAAC TTGATAAGGC GGAGTTTGCG GGGAGTTATA CTAGCTTGCC TCATGTTCAT 300 GGAAATAATG ATAATCATGT TAAGGATGTT ACTTTTACGC TGGCGATAAC TGAACTGTTG 4863 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAAATAATG ATAATCATGT TAAGGATGTT ACTTTTACGC TGGCGATAAC TGAACTGTTG 360 GAGGATATTG GATTGGAAGA TGAAGATACA ATTGCGGTAA CTTTGGTTCC AAAAGTTGGT 4803 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGGATATTG GATTGGAAGA TGAAGATACA ATTGCGGTAA CTTTGGTTCC AAAAGTTGGT 420 GGTGAAGGTG TATCCATTGA AAGTGTGGAG ATCAAGCTTG AGGATTGTTA AAGCCTTCAT 4743 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGAAGGTG TATCCATTGA AAGTGTGGAG ATCAAGCTTG AGGATTGTTA AAGCCTTCAT 480 GAGTTGGTGG CTATGGTGCC AAATTTTATG TTTAATTAGT TTAATTGTGT GTGGTTTGGT 4683 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGTTGGTGG CTATGGTGCC AAATTTTATG TTTAATTAGT TTAATTGTGT GTGGTTTGGT 540 TATGTTTATG TTATGTTAAA ATGAAATGTA TCAGCTGGAT AGCTCATTAC TGCCTTGCTA 4623 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATGTTTATG TTATGTTAAA ATGAAATGTA TCAGCTGGAT AGCTCATTAC TGCCTTGCTA 600 GTTTTGTTGA TGCTATCTAT GAAATAAAAA AATAAATGGT TGTCTTTC 4575 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| GTTTTGTTGA TGCTATCTAT GAAATAAAAA AATAAATGGT TGTCTTTC 648 hqPGS_C08HBa0336I24.1-_SGN-E378013- (5222 4575) ******************************************************************************** EST sequence 54 -strand 642 n (File: SGN-E396266-) 1 CAGCGTCAAT TGCACCAGTT AGCAAGGTGT TCCCACTGGC CAAGCTGGAC CGTGCGATTT 61 CGTTCTCGAT CACGCGGCCA GCTTCGTCAA GGACAACACA AGAGAAAAAT GAGCAGGAGG 121 AGATTCTGAC ATTCAATAAA ATGGCATATG ATGATACGAA GTATGTAAGG TTCGATGTGT 181 TTTTGAACGT GGACAAGACT GTGAATGCAG AAGAACTTGA TAAGGCGGAG TTTGCGGGGA 241 GTTATACTAG CTTGCCTCAT GTTCATGGAA ATAATGATAA TCATGTTAAG GATGTTACTT 301 TTACGCTGGC GATAACTGAA CTGTTGGAGG ATATTGGATT GGAAGATGAA GATACAATTG 361 CGGTAACTTT GGTTCCAAAA GTTGGTGGTG AAGGTGTATC CATTGAAAGT GTGGAGATCA 421 AGCTTGAGGA TTGTTAAAGC CTTCATGAGT TGGTGGCTAT GGTGCCAAAT TTTATGTTTA 481 ATTAGTTTAA TTGTGTGTGG TTTGGTTATG TTTATGTTAT GTTAAAATGA AATGTATCAG 541 CTGGATAGCT CATTACTGCC TTGCTAGTTT TGTTGATGCT ATCTATGAAA TAAAAAAATA 601 AATGGTTGTC TTTCAAAAAA AAAAAAAAAA AACTCGAACT AG Predicted gene structure (within gDNA segment 5798 to 3704): Exon 1 5188 4575 ( 614 n); cDNA 1 614 ( 614 n); score: 1.000 PPA cDNA 615 633 MATCH C08HBa0336I24.1- SGN-E396266- 1.000 614 0.956 C PGS_C08HBa0336I24.1-_SGN-E396266- (5188 4575) Alignment (genomic DNA sequence = upper lines): CAGCGTCAAT TGCACCAGTT AGCAAGGTGT TCCCACTGGC CAAGCTGGAC CGTGCGATTT 5129 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGCGTCAAT TGCACCAGTT AGCAAGGTGT TCCCACTGGC CAAGCTGGAC CGTGCGATTT 60 CGTTCTCGAT CACGCGGCCA GCTTCGTCAA GGACAACACA AGAGAAAAAT GAGCAGGAGG 5069 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTCTCGAT CACGCGGCCA GCTTCGTCAA GGACAACACA AGAGAAAAAT GAGCAGGAGG 120 AGATTCTGAC ATTCAATAAA ATGGCATATG ATGATACGAA GTATGTAAGG TTCGATGTGT 5009 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATTCTGAC ATTCAATAAA ATGGCATATG ATGATACGAA GTATGTAAGG TTCGATGTGT 180 TTTTGAACGT GGACAAGACT GTGAATGCAG AAGAACTTGA TAAGGCGGAG TTTGCGGGGA 4949 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTGAACGT GGACAAGACT GTGAATGCAG AAGAACTTGA TAAGGCGGAG TTTGCGGGGA 240 GTTATACTAG CTTGCCTCAT GTTCATGGAA ATAATGATAA TCATGTTAAG GATGTTACTT 4889 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTATACTAG CTTGCCTCAT GTTCATGGAA ATAATGATAA TCATGTTAAG GATGTTACTT 300 TTACGCTGGC GATAACTGAA CTGTTGGAGG ATATTGGATT GGAAGATGAA GATACAATTG 4829 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTACGCTGGC GATAACTGAA CTGTTGGAGG ATATTGGATT GGAAGATGAA GATACAATTG 360 CGGTAACTTT GGTTCCAAAA GTTGGTGGTG AAGGTGTATC CATTGAAAGT GTGGAGATCA 4769 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGTAACTTT GGTTCCAAAA GTTGGTGGTG AAGGTGTATC CATTGAAAGT GTGGAGATCA 420 AGCTTGAGGA TTGTTAAAGC CTTCATGAGT TGGTGGCTAT GGTGCCAAAT TTTATGTTTA 4709 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCTTGAGGA TTGTTAAAGC CTTCATGAGT TGGTGGCTAT GGTGCCAAAT TTTATGTTTA 480 ATTAGTTTAA TTGTGTGTGG TTTGGTTATG TTTATGTTAT GTTAAAATGA AATGTATCAG 4649 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAGTTTAA TTGTGTGTGG TTTGGTTATG TTTATGTTAT GTTAAAATGA AATGTATCAG 540 CTGGATAGCT CATTACTGCC TTGCTAGTTT TGTTGATGCT ATCTATGAAA TAAAAAAATA 4589 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGGATAGCT CATTACTGCC TTGCTAGTTT TGTTGATGCT ATCTATGAAA TAAAAAAATA 600 AATGGTTGTC TTTC 4575 |||||||||| |||| AATGGTTGTC TTTC 614 hqPGS_C08HBa0336I24.1-_SGN-E396266- (5188 4575) ******************************************************************************** EST sequence 19 -strand 509 n (File: SGN-E241713-) 1 TCAATAAAAT GGCATATGAT GATACCAAGT ATGTAAGGTT CGATGTGTTT TTGAACGTGG 61 ACAAGACTGT GAATGCAGAA GAACTTGATA AGGCGGAGTT TGCGGGGAGT TATACTAGCT 121 TGCCTCATGT TCATGGAAAT AATGATAATC ATGTTAAGGA TGTTACTTTT ACGCTGGCGA 181 TAACTGAACT GTTGGAGGAT ATTGGATTGG AAGATGAAGA TACAATTGCG GTAACTTTGG 241 TTCCAAAAGT TGGTGGTGAA GGTGTATCCA TTGAAAGTGT GGAGATCAAG CTTGAGGATT 301 GTTAAAGCCT TCATGAGTTG GTGGCTATGG TGCCAAATTT TATGTTTAAT TAGTTTAATT 361 GTGTGTGGTT TGGTTATGTT TATGTTATGT TAAAATGAAA TGTATCAGCT GGATAGCTCA 421 TTACTGCCTT GCTAGTTTTG TTGATGCTAT CTATGAAATA AAAAAATAAA TGGTTGTCTT 481 TCAAAAAAAA AAAAAAAAAA CTCGAACTA Predicted gene structure (within gDNA segment 5666 to 3714): Exon 1 5056 4575 ( 482 n); cDNA 1 482 ( 482 n); score: 0.998 PPA cDNA 483 501 MATCH C08HBa0336I24.1- SGN-E241713- 0.998 482 0.947 C PGS_C08HBa0336I24.1-_SGN-E241713- (5056 4575) Alignment (genomic DNA sequence = upper lines): TCAATAAAAT GGCATATGAT GATACGAAGT ATGTAAGGTT CGATGTGTTT TTGAACGTGG 4997 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| TCAATAAAAT GGCATATGAT GATACCAAGT ATGTAAGGTT CGATGTGTTT TTGAACGTGG 60 ACAAGACTGT GAATGCAGAA GAACTTGATA AGGCGGAGTT TGCGGGGAGT TATACTAGCT 4937 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAGACTGT GAATGCAGAA GAACTTGATA AGGCGGAGTT TGCGGGGAGT TATACTAGCT 120 TGCCTCATGT TCATGGAAAT AATGATAATC ATGTTAAGGA TGTTACTTTT ACGCTGGCGA 4877 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCCTCATGT TCATGGAAAT AATGATAATC ATGTTAAGGA TGTTACTTTT ACGCTGGCGA 180 TAACTGAACT GTTGGAGGAT ATTGGATTGG AAGATGAAGA TACAATTGCG GTAACTTTGG 4817 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAACTGAACT GTTGGAGGAT ATTGGATTGG AAGATGAAGA TACAATTGCG GTAACTTTGG 240 TTCCAAAAGT TGGTGGTGAA GGTGTATCCA TTGAAAGTGT GGAGATCAAG CTTGAGGATT 4757 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCAAAAGT TGGTGGTGAA GGTGTATCCA TTGAAAGTGT GGAGATCAAG CTTGAGGATT 300 GTTAAAGCCT TCATGAGTTG GTGGCTATGG TGCCAAATTT TATGTTTAAT TAGTTTAATT 4697 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTAAAGCCT TCATGAGTTG GTGGCTATGG TGCCAAATTT TATGTTTAAT TAGTTTAATT 360 GTGTGTGGTT TGGTTATGTT TATGTTATGT TAAAATGAAA TGTATCAGCT GGATAGCTCA 4637 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGTGTGGTT TGGTTATGTT TATGTTATGT TAAAATGAAA TGTATCAGCT GGATAGCTCA 420 TTACTGCCTT GCTAGTTTTG TTGATGCTAT CTATGAAATA AAAAAATAAA TGGTTGTCTT 4577 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTACTGCCTT GCTAGTTTTG TTGATGCTAT CTATGAAATA AAAAAATAAA TGGTTGTCTT 480 TC 4575 || TC 482 hqPGS_C08HBa0336I24.1-_SGN-E241713- (5056 4575) ******************************************************************************** EST sequence 33 -strand 497 n (File: SGN-E231932-) 1 CATATGATCA TACGAAGTAT GTAAGGTTCG ATGTGTTTTT GAACGTGGAC AAGACTGTGA 61 ATGCAGAAGA ACTTGATAAG GCGGAGTTTG CGGGGAGTTA TACTAGCTTG CCTCATGTTC 121 ATGGAAATAA TGATAATCAT GTTAAGGATG TTACTTTTAC GCTGGCGATA ACTGAACTGT 181 TGGAGGATAT TGGATTGGAA GATGAAGATA CAATTGCGGT AACTTTGGTT CCAAAAGTTG 241 GTGGTGAAGG TGTATCCATT GAAAGTGTGG AGATCAAGCT TGAGGATTGT TAAAGCCTTC 301 ATGAGTTGGT GGCTATGGTG CCAAATTTTA TGTTTAATTA GTTTAATTGT GTGTGGTTTG 361 GTTATGTTTA TGTTATGTTA AAATGAAATG TATCAGCTGG ATAGCTCATT ACTGCCTTGC 421 TAGTTTTGTT GATGCTATCT ATGAAATAAA AAAATAAATG GTTGTCTTTC AAAAAAAAAA 481 AAAAAAAACT CGAACTA Predicted gene structure (within gDNA segment 5735 to 3714): Exon 1 5044 4575 ( 470 n); cDNA 1 470 ( 470 n); score: 0.998 PPA cDNA 471 489 MATCH C08HBa0336I24.1- SGN-E231932- 0.998 470 0.946 C PGS_C08HBa0336I24.1-_SGN-E231932- (5044 4575) Alignment (genomic DNA sequence = upper lines): CATATGATGA TACGAAGTAT GTAAGGTTCG ATGTGTTTTT GAACGTGGAC AAGACTGTGA 4985 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATATGATCA TACGAAGTAT GTAAGGTTCG ATGTGTTTTT GAACGTGGAC AAGACTGTGA 60 ATGCAGAAGA ACTTGATAAG GCGGAGTTTG CGGGGAGTTA TACTAGCTTG CCTCATGTTC 4925 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGCAGAAGA ACTTGATAAG GCGGAGTTTG CGGGGAGTTA TACTAGCTTG CCTCATGTTC 120 ATGGAAATAA TGATAATCAT GTTAAGGATG TTACTTTTAC GCTGGCGATA ACTGAACTGT 4865 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGAAATAA TGATAATCAT GTTAAGGATG TTACTTTTAC GCTGGCGATA ACTGAACTGT 180 TGGAGGATAT TGGATTGGAA GATGAAGATA CAATTGCGGT AACTTTGGTT CCAAAAGTTG 4805 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGAGGATAT TGGATTGGAA GATGAAGATA CAATTGCGGT AACTTTGGTT CCAAAAGTTG 240 GTGGTGAAGG TGTATCCATT GAAAGTGTGG AGATCAAGCT TGAGGATTGT TAAAGCCTTC 4745 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGGTGAAGG TGTATCCATT GAAAGTGTGG AGATCAAGCT TGAGGATTGT TAAAGCCTTC 300 ATGAGTTGGT GGCTATGGTG CCAAATTTTA TGTTTAATTA GTTTAATTGT GTGTGGTTTG 4685 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGAGTTGGT GGCTATGGTG CCAAATTTTA TGTTTAATTA GTTTAATTGT GTGTGGTTTG 360 GTTATGTTTA TGTTATGTTA AAATGAAATG TATCAGCTGG ATAGCTCATT ACTGCCTTGC 4625 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTATGTTTA TGTTATGTTA AAATGAAATG TATCAGCTGG ATAGCTCATT ACTGCCTTGC 420 TAGTTTTGTT GATGCTATCT ATGAAATAAA AAAATAAATG GTTGTCTTTC 4575 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGTTTTGTT GATGCTATCT ATGAAATAAA AAAATAAATG GTTGTCTTTC 470 hqPGS_C08HBa0336I24.1-_SGN-E231932- (5044 4575) ******************************************************************************** EST sequence 14 -strand 413 n (File: SGN-E239647-) 1 AGTTTGCGGG GAGTTATACT AGCCTGCCTC ATGTTCATGG AAATAATGAT AATCATGTTA 61 AGGATGTTAC TTTTACGCTG GCGATAACTG AACTGTTGGA GGATATTGGA TTGGAAGATG 121 AAGATACAAT TGCGGTAACT TTGGTTCCAA AAGTTGGTGG TGAAGGTGTA TCCATTGAAA 181 GTGTGGAGAT CAAGCTTGAG GATTGTTAAA GCCTTCATGA GTTGGTGGCT ATGGTGCCAA 241 ATTTTATGTT TAATTAGTTT AATTGTGTGT GGTTTGGTTA TGTTTATGTT ATGTTAAAAT 301 GAAATGTATC AGCTGGATAG CTCATTACTG CCTTGCTAGT TTTGTTGATG CTATCTATGA 361 AATAAAAAAA TAAATGGTTG TCTTTCAAAA AAAAAAAAAA AAAACTCGAA CTA Predicted gene structure (within gDNA segment 5570 to 3714): Exon 1 4960 4575 ( 386 n); cDNA 1 386 ( 386 n); score: 0.997 PPA cDNA 387 405 MATCH C08HBa0336I24.1- SGN-E239647- 0.997 386 0.935 C PGS_C08HBa0336I24.1-_SGN-E239647- (4960 4575) Alignment (genomic DNA sequence = upper lines): AGTTTGCGGG GAGTTATACT AGCTTGCCTC ATGTTCATGG AAATAATGAT AATCATGTTA 4901 |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| AGTTTGCGGG GAGTTATACT AGCCTGCCTC ATGTTCATGG AAATAATGAT AATCATGTTA 60 AGGATGTTAC TTTTACGCTG GCGATAACTG AACTGTTGGA GGATATTGGA TTGGAAGATG 4841 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGATGTTAC TTTTACGCTG GCGATAACTG AACTGTTGGA GGATATTGGA TTGGAAGATG 120 AAGATACAAT TGCGGTAACT TTGGTTCCAA AAGTTGGTGG TGAAGGTGTA TCCATTGAAA 4781 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGATACAAT TGCGGTAACT TTGGTTCCAA AAGTTGGTGG TGAAGGTGTA TCCATTGAAA 180 GTGTGGAGAT CAAGCTTGAG GATTGTTAAA GCCTTCATGA GTTGGTGGCT ATGGTGCCAA 4721 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGTGGAGAT CAAGCTTGAG GATTGTTAAA GCCTTCATGA GTTGGTGGCT ATGGTGCCAA 240 ATTTTATGTT TAATTAGTTT AATTGTGTGT GGTTTGGTTA TGTTTATGTT ATGTTAAAAT 4661 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTTATGTT TAATTAGTTT AATTGTGTGT GGTTTGGTTA TGTTTATGTT ATGTTAAAAT 300 GAAATGTATC AGCTGGATAG CTCATTACTG CCTTGCTAGT TTTGTTGATG CTATCTATGA 4601 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAATGTATC AGCTGGATAG CTCATTACTG CCTTGCTAGT TTTGTTGATG CTATCTATGA 360 AATAAAAAAA TAAATGGTTG TCTTTC 4575 |||||||||| |||||||||| |||||| AATAAAAAAA TAAATGGTTG TCTTTC 386 hqPGS_C08HBa0336I24.1-_SGN-E239647- (4960 4575) ******************************************************************************** EST sequence 41 -strand 473 n (File: SGN-E227346-) 1 GTGTTTCTGA ACGTGGACAA GACTGTGAAT GCAGATGAGC TTGATAAGGC GGAGTTTGCA 61 GGGAGTTATA CTAGCTTGCC GCATGTTCAT GGAAGTAATA CTAATCATGT TACCAGTGTT 121 ACTTTCAAGC TGGCGATAAC TGAACTGTTG GAGGATATTG GATTGGAAGA TGAAGATACT 181 ATTGCGGTGA CTTTGGTTCC AAAAGCTGGC GGTGAAGAAG TGTCCATTGA AAGTGTGGAG 241 ATCAAGCTTG AGGATTGTTA AAGTCTGCAT GAGTTGGTGG CTATGGTGCC AAATTTTATG 301 TTTAATTAGT ATAATTATGT GTGGTTTGAG TTATGTTTTA TGTTAAAATG TATCAGCTCG 361 ATCGATAGCT GATTGCTAGT TGTGTTAATG CTATGTATGA AATAAATAAA TGGTTGTCTT 421 CCATTCAGTT TTATATCATT TTTTGTCATT CTAATAAAAA AAAAAAAAAA AAA Predicted gene structure (within gDNA segment 5973 to 2473): Exon 1 5012 4592 ( 421 n); cDNA 1 409 ( 409 n); score: 0.882 PPA cDNA 453 473 MATCH C08HBa0336I24.1- SGN-E227346- 0.882 421 0.890 C PGS_C08HBa0336I24.1-_SGN-E227346- (5012 4592) Alignment (genomic DNA sequence = upper lines): GTGTTTTTGA ACGTGGACAA GACTGTGAAT GCAGAAGAAC TTGATAAGGC GGAGTTTGCG 4953 |||||| ||| |||||||||| |||||||||| ||||| || | |||||||||| ||||||||| GTGTTTCTGA ACGTGGACAA GACTGTGAAT GCAGATGAGC TTGATAAGGC GGAGTTTGCA 60 GGGAGTTATA CTAGCTTGCC TCATGTTCAT GGAAATAATG ATAATCATGT TAAGGATGTT 4893 |||||||||| |||||||||| ||||||||| |||| |||| ||||||||| || |||| GGGAGTTATA CTAGCTTGCC GCATGTTCAT GGAAGTAATA CTAATCATGT TACCAGTGTT 120 ACTTTTACGC TGGCGATAAC TGAACTGTTG GAGGATATTG GATTGGAAGA TGAAGATACA 4833 ||||| | || |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| ACTTTCAAGC TGGCGATAAC TGAACTGTTG GAGGATATTG GATTGGAAGA TGAAGATACT 180 ATTGCGGTAA CTTTGGTTCC AAAAGTTGGT GGTGAAGGTG TATCCATTGA AAGTGTGGAG 4773 |||||||| | |||||||||| ||||| ||| ||||||| | | |||||||| |||||||||| ATTGCGGTGA CTTTGGTTCC AAAAGCTGGC GGTGAAGAAG TGTCCATTGA AAGTGTGGAG 240 ATCAAGCTTG AGGATTGTTA AAGCCTTCAT GAGTTGGTGG CTATGGTGCC AAATTTTATG 4713 |||||||||| |||||||||| ||| || ||| |||||||||| |||||||||| |||||||||| ATCAAGCTTG AGGATTGTTA AAGTCTGCAT GAGTTGGTGG CTATGGTGCC AAATTTTATG 300 TTTAATTAGT TTAATTGTGT GTGGTTTG-G TTATGTTTAT GTTATGTTAA AATGAAATGT 4654 |||||||||| ||||| ||| |||||||| | ||||| | | ||||||| | |||||| TTTAATTAGT ATAATTATGT GTGGTTTGAG TTATG--T-T -TTATGTT-- -A--AAATGT 351 ATCAGCTGGA TAGCTCATTA CTGCCTTGCT AGTTTTGTTG ATGCTATCTA TGAAATAAAA 4594 ||||||| || | | || ||| ||||| |||| |||| ||||||| || ||||||||| ATCAGCTCGA T--C-GATAG CTG-ATTGCT AGTTGTGTTA ATGCTATGTA TGAAATAAAT 407 AA 4592 || AA 409 hqPGS_C08HBa0336I24.1-_SGN-E227346- (5012 4592) ******************************************************************************** EST sequence 10 -strand 431 n (File: SGN-E225510-) 1 GATGAGCTTG ATAAGGCGGA GTTTGCAGGG AGTTATACTA GCTTGCCGCA TGTTCATGGA 61 AGTAATACTA ATCATGTTAC CAGTGTTACT TTCAAGCTGG CGATAACTGA ACTGTTGGAG 121 GATATTGGAT TGGAAGATGA AGATACTATT GCGGTGACTT TGGTTCCAAA AGCTGGCGGT 181 GAAGAAGTGT CCATTGAAAG TGTGGAGATC AAGCTTGAGG ATTGTTAAAG TCTGCATGAG 241 TTGGTGGCTA TGGTGCCAAA TTTTATGTTT AATTAGTATA ATTATGTGTG GTCTGAGTTA 301 TGTTTTATGT TAAAATGTAT CAGCTCGATC GATAGCTGAT TGCTAGTTGT GTTAATGCTA 361 TGTATCAAAT AAATAAATGG TTGTCCCCCC TTCCAAAAAA AAAAAAAAAA AAAAAAAAAA 421 AAAAAAAAAA A Predicted gene structure (within gDNA segment 5643 to 2563): Exon 1 4979 4592 ( 388 n); cDNA 1 376 ( 376 n); score: 0.870 PPA cDNA 395 431 MATCH C08HBa0336I24.1- SGN-E225510- 0.870 388 0.900 C PGS_C08HBa0336I24.1-_SGN-E225510- (4979 4592) Alignment (genomic DNA sequence = upper lines): GAAGAACTTG ATAAGGCGGA GTTTGCGGGG AGTTATACTA GCTTGCCTCA TGTTCATGGA 4920 || || |||| |||||||||| |||||| ||| |||||||||| ||||||| || |||||||||| GATGAGCTTG ATAAGGCGGA GTTTGCAGGG AGTTATACTA GCTTGCCGCA TGTTCATGGA 60 AATAATGATA ATCATGTTAA GGATGTTACT TTTACGCTGG CGATAACTGA ACTGTTGGAG 4860 | |||| || ||||||||| ||||||| || | ||||| |||||||||| |||||||||| AGTAATACTA ATCATGTTAC CAGTGTTACT TTCAAGCTGG CGATAACTGA ACTGTTGGAG 120 GATATTGGAT TGGAAGATGA AGATACAATT GCGGTAACTT TGGTTCCAAA AGTTGGTGGT 4800 |||||||||| |||||||||| |||||| ||| ||||| |||| |||||||||| || ||| ||| GATATTGGAT TGGAAGATGA AGATACTATT GCGGTGACTT TGGTTCCAAA AGCTGGCGGT 180 GAAGGTGTAT CCATTGAAAG TGTGGAGATC AAGCTTGAGG ATTGTTAAAG CCTTCATGAG 4740 |||| || | |||||||||| |||||||||| |||||||||| |||||||||| || |||||| GAAGAAGTGT CCATTGAAAG TGTGGAGATC AAGCTTGAGG ATTGTTAAAG TCTGCATGAG 240 TTGGTGGCTA TGGTGCCAAA TTTTATGTTT AATTAGTTTA ATTGTGTGTG GTTTG-GTTA 4681 |||||||||| |||||||||| |||||||||| ||||||| || ||| |||||| || || |||| TTGGTGGCTA TGGTGCCAAA TTTTATGTTT AATTAGTATA ATTATGTGTG GTCTGAGTTA 300 TGTTTATGTT ATGTTAAAAT GAAATGTATC AGCTGGATAG CTCATTACTG CCTTGCTAGT 4621 || | | || ||||| | ||||||||| |||| ||| | || ||| |||||||| TG--T-T-TT ATGTT---A- -AAATGTATC AGCTCGAT-- C-GATAGCTG -ATTGCTAGT 347 TTTGTTGATG CTATCTATGA AATAAAAAA 4592 | |||| ||| |||| ||| | |||||| || TGTGTTAATG CTATGTATCA AATAAATAA 376 hqPGS_C08HBa0336I24.1-_SGN-E225510- (4979 4592) ******************************************************************************** EST sequence 8 -strand 319 n (File: SGN-E225303-) 1 TGTTGGAGGA TATTGGATTG GAAGATGAAG ATACTATTCC GGTGCCTTTG GTTCCAAAAG 61 CTGCCGGTAA AAAAGTGTCC ATTGAAAGTG TGGAGATCAA GCTTGAGGAT TGTTAAAGTT 121 TGCATGAGTT GGTGGCTATG GTGCCCAATT TTATGTTTAA TTAGTAAAAT TATGTGTGGT 181 TTGAGTTATG TTTTATGTTA AAATGTATCA GCTCGATCGA TACCTGATTG CTAGTTGTGT 241 TAATGCTATG TATGAAATAA ATGAATGGTT GTCTTCCCTT CCGAAAAAAA AAAAAAAAAC 301 AAAAAAAAAA AAAAAAAAA Predicted gene structure (within gDNA segment 5477 to 2563): Exon 1 4867 4595 ( 273 n); cDNA 1 261 ( 261 n); score: 0.844 PPA cDNA 284 319 MATCH C08HBa0336I24.1- SGN-E225303- 0.844 273 0.856 C PGS_C08HBa0336I24.1-_SGN-E225303- (4867 4595) Alignment (genomic DNA sequence = upper lines): TGTTGGAGGA TATTGGATTG GAAGATGAAG ATACAATTGC GGTAACTTTG GTTCCAAAAG 4808 |||||||||| |||||||||| |||||||||| |||| ||| | ||| ||||| |||||||||| TGTTGGAGGA TATTGGATTG GAAGATGAAG ATACTATTCC GGTGCCTTTG GTTCCAAAAG 60 TTGGTGGTGA AGGTGTATCC ATTGAAAGTG TGGAGATCAA GCTTGAGGAT TGTTAAAGCC 4748 || ||| | | || ||| |||||||||| |||||||||| |||||||||| |||||||| CTGCCGGTAA AAAAGTGTCC ATTGAAAGTG TGGAGATCAA GCTTGAGGAT TGTTAAAGTT 120 TTCATGAGTT GGTGGCTATG GTGCCAAATT TTATGTTTAA TTAGTTTAAT TGTGTGTGGT 4688 | |||||||| |||||||||| ||||| |||| |||||||||| ||||| ||| | |||||||| TGCATGAGTT GGTGGCTATG GTGCCCAATT TTATGTTTAA TTAGTAAAAT TATGTGTGGT 180 TTG-GTTATG TTTATGTTAT GTTAAAATGA AATGTATCAG CTGGATAGCT CATTACTGCC 4629 ||| |||||| | | |||| ||| | | |||||||||| || ||| | || ||| TTGAGTTATG --T-T-TTAT GTT---A--A AATGTATCAG CTCGAT--C- GATACCTG-A 227 TTGCTAGTTT TGTTGATGCT ATCTATGAAA TAAA 4595 ||||||||| |||| ||||| || ||||||| |||| TTGCTAGTTG TGTTAATGCT ATGTATGAAA TAAA 261 hqPGS_C08HBa0336I24.1-_SGN-E225303- (4867 4595) ******************************************************************************** EST sequence 274 +strand 586 n (File: SGN-E342182+) 1 TCAATTGCAC CAGTTAGCAA GGTGTTCCCA CTGGCCAAGC TGGACCGTGC GATTTCGTTC 61 TCGATCACGC GGCCAGCTTC GTCAAGGACA ACACAAGAGA AAAATGAGCA GGAGGAGATT 121 CTGACATTCA ATAAAATGGC ATATGATGAT ACGAAGTATG TAAGGTTCGA TGTGTTTTTG 181 AACGTGGACA AGACTGTGAA TGCAGAAGAA CTTGATAAGG CGGAGTTTGC GGGGAGTTAT 241 ACTAGCTTGC CTCATGTTCA TGGAAATAAT GATAATCATG TTAAGGATGT TACTTTTACG 301 CTGGCGATAA CTGAACTGTT GGAGGATATT GGATTGGAAG ATGAAGATAC AATTGCGGTA 361 ACTTTGGTTC CAAAAGTTGG TGGTGAAGGT GTATCCATTG AAAGTGTGGA GATCAAGCTT 421 GAGGATTGTT AAAGCCTTCA TGAGTTGGTG GCTATGGTGC CAAATTTTAT GTTTAATTAG 481 TTTAATTGTG TGTGGTTTGG TTATGTTTAT GTTATGTTAA AATGAAATGT ATCAGCTGGA 541 TAGCTCATTA CTGCCTTGCT AGTTTTGTTG ATGCTATCTA TGAAAT Predicted gene structure (within gDNA segment 5783 to 3988): Exon 1 5183 4598 ( 586 n); cDNA 1 586 ( 586 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E342182+ 1.000 586 1.000 C PGS_C08HBa0336I24.1-_SGN-E342182+ (5183 4598) Alignment (genomic DNA sequence = upper lines): TCAATTGCAC CAGTTAGCAA GGTGTTCCCA CTGGCCAAGC TGGACCGTGC GATTTCGTTC 5124 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAATTGCAC CAGTTAGCAA GGTGTTCCCA CTGGCCAAGC TGGACCGTGC GATTTCGTTC 60 TCGATCACGC GGCCAGCTTC GTCAAGGACA ACACAAGAGA AAAATGAGCA GGAGGAGATT 5064 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGATCACGC GGCCAGCTTC GTCAAGGACA ACACAAGAGA AAAATGAGCA GGAGGAGATT 120 CTGACATTCA ATAAAATGGC ATATGATGAT ACGAAGTATG TAAGGTTCGA TGTGTTTTTG 5004 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGACATTCA ATAAAATGGC ATATGATGAT ACGAAGTATG TAAGGTTCGA TGTGTTTTTG 180 AACGTGGACA AGACTGTGAA TGCAGAAGAA CTTGATAAGG CGGAGTTTGC GGGGAGTTAT 4944 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACGTGGACA AGACTGTGAA TGCAGAAGAA CTTGATAAGG CGGAGTTTGC GGGGAGTTAT 240 ACTAGCTTGC CTCATGTTCA TGGAAATAAT GATAATCATG TTAAGGATGT TACTTTTACG 4884 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTAGCTTGC CTCATGTTCA TGGAAATAAT GATAATCATG TTAAGGATGT TACTTTTACG 300 CTGGCGATAA CTGAACTGTT GGAGGATATT GGATTGGAAG ATGAAGATAC AATTGCGGTA 4824 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGGCGATAA CTGAACTGTT GGAGGATATT GGATTGGAAG ATGAAGATAC AATTGCGGTA 360 ACTTTGGTTC CAAAAGTTGG TGGTGAAGGT GTATCCATTG AAAGTGTGGA GATCAAGCTT 4764 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTTGGTTC CAAAAGTTGG TGGTGAAGGT GTATCCATTG AAAGTGTGGA GATCAAGCTT 420 GAGGATTGTT AAAGCCTTCA TGAGTTGGTG GCTATGGTGC CAAATTTTAT GTTTAATTAG 4704 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGGATTGTT AAAGCCTTCA TGAGTTGGTG GCTATGGTGC CAAATTTTAT GTTTAATTAG 480 TTTAATTGTG TGTGGTTTGG TTATGTTTAT GTTATGTTAA AATGAAATGT ATCAGCTGGA 4644 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTAATTGTG TGTGGTTTGG TTATGTTTAT GTTATGTTAA AATGAAATGT ATCAGCTGGA 540 TAGCTCATTA CTGCCTTGCT AGTTTTGTTG ATGCTATCTA TGAAAT 4598 |||||||||| |||||||||| |||||||||| |||||||||| |||||| TAGCTCATTA CTGCCTTGCT AGTTTTGTTG ATGCTATCTA TGAAAT 586 hqPGS_C08HBa0336I24.1-_SGN-E342182+ (5183 4598) ******************************************************************************** EST sequence 3 -strand 274 n (File: SGN-E222668-) 1 CGGTGACTTT GGTTCCAAAA GCTGGCGGTG AAGAAGTGTC CATTGAAAGT GTGGAGATCA 61 AGCTTGAGGA TTGTTAAAGT CTGCATGAGT TGGTGGCTAT GGTGCCAAAT TTTATGTTTA 121 ATTAGTATAA TTATGTGTGG TTTGAGTTAT GTTTTATGTT AAAATGTATC AGCTCGATCG 181 ATAGCTGATT GCTAGTTGTG TTAATCCTAT GTATGATTTG ATTGGCTGTA AAATAAATTT 241 GTCATTTGTG CTCAAAAAAA AAAAAAAAAA AAAA Predicted gene structure (within gDNA segment 5483 to 2623): Exon 1 4828 4632 ( 197 n); cDNA 1 193 ( 193 n); score: 0.860 PPA cDNA 254 274 MATCH C08HBa0336I24.1- SGN-E222668- 0.860 197 0.719 C PGS_C08HBa0336I24.1-_SGN-E222668- (4828 4632) Alignment (genomic DNA sequence = upper lines): CGGTAACTTT GGTTCCAAAA GTTGGTGGTG AAGGTGTATC CATTGAAAGT GTGGAGATCA 4769 |||| ||||| |||||||||| | ||| |||| ||| || || |||||||||| |||||||||| CGGTGACTTT GGTTCCAAAA GCTGGCGGTG AAGAAGTGTC CATTGAAAGT GTGGAGATCA 60 AGCTTGAGGA TTGTTAAAGC CTTCATGAGT TGGTGGCTAT GGTGCCAAAT TTTATGTTTA 4709 |||||||||| ||||||||| || ||||||| |||||||||| |||||||||| |||||||||| AGCTTGAGGA TTGTTAAAGT CTGCATGAGT TGGTGGCTAT GGTGCCAAAT TTTATGTTTA 120 ATTAGTTTAA TTGTGTGTGG TTTG-GTTAT GTTTATGTTA TGTTAAAATG AAATGTATCA 4650 |||||| ||| || ||||||| |||| ||||| | | | ||| |||||||||| | || ATTAGTATAA TTATGTGTGG TTTGAGTTAT G--T-T-TTA TGTTAAAATG TATCAGCTC- 175 GCTGGATAGC TCATTACT 4632 | | |||||| | ||| || GATCGATAGC TGATTGCT 193 hqPGS_C08HBa0336I24.1-_SGN-E222668- (4828 4632) ******************************************************************************** EST sequence 50 -strand 438 n (File: SGN-E229636-) 1 TCAATAAAAT GGCATATGAT GATACAAAGT ATGTAAGGTT CGATGTGTTT TTAAACGTGG 61 ACAAGACTGT GAATGCAGAA GAACTTGATA AGGCGGAGTT TGCGGGGAGT TATACTAGCT 121 TGCCTCATGT TCATGGAAAT AATGATAATC ATGTTAAGGA TGTTACTTTT ACGCTGGCGA 181 TAACTGAACT GTTGGAGGAT ATTGGATTGG AAGATGAAGA TACAATTCCG GTAACTTTGG 241 TTCCAAAAGT TGGTGGTGAA GGTGTATCCA TTGAAAGTGT GGAGATCAAG CTTGAGGATT 301 GTTAAAGCCT TCATGAGTTG GTGGCTATGG TCCCAAATTT TATGTTTAAT TAGTTTAATT 361 GTGTGTGGTT TGGTTATGTT TATGTTATGT TAAAATCAAA TGTATCAGCT GGATAGCTCA 421 TTAAAAAAAA AAAAAAAA Predicted gene structure (within gDNA segment 5666 to 3884): Exon 1 5056 4634 ( 423 n); cDNA 1 423 ( 423 n); score: 0.988 PPA cDNA 424 438 MATCH C08HBa0336I24.1- SGN-E229636- 0.988 423 0.966 C PGS_C08HBa0336I24.1-_SGN-E229636- (5056 4634) Alignment (genomic DNA sequence = upper lines): TCAATAAAAT GGCATATGAT GATACGAAGT ATGTAAGGTT CGATGTGTTT TTGAACGTGG 4997 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| || ||||||| TCAATAAAAT GGCATATGAT GATACAAAGT ATGTAAGGTT CGATGTGTTT TTAAACGTGG 60 ACAAGACTGT GAATGCAGAA GAACTTGATA AGGCGGAGTT TGCGGGGAGT TATACTAGCT 4937 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAGACTGT GAATGCAGAA GAACTTGATA AGGCGGAGTT TGCGGGGAGT TATACTAGCT 120 TGCCTCATGT TCATGGAAAT AATGATAATC ATGTTAAGGA TGTTACTTTT ACGCTGGCGA 4877 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCCTCATGT TCATGGAAAT AATGATAATC ATGTTAAGGA TGTTACTTTT ACGCTGGCGA 180 TAACTGAACT GTTGGAGGAT ATTGGATTGG AAGATGAAGA TACAATTGCG GTAACTTTGG 4817 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| TAACTGAACT GTTGGAGGAT ATTGGATTGG AAGATGAAGA TACAATTCCG GTAACTTTGG 240 TTCCAAAAGT TGGTGGTGAA GGTGTATCCA TTGAAAGTGT GGAGATCAAG CTTGAGGATT 4757 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCAAAAGT TGGTGGTGAA GGTGTATCCA TTGAAAGTGT GGAGATCAAG CTTGAGGATT 300 GTTAAAGCCT TCATGAGTTG GTGGCTATGG TGCCAAATTT TATGTTTAAT TAGTTTAATT 4697 |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| GTTAAAGCCT TCATGAGTTG GTGGCTATGG TCCCAAATTT TATGTTTAAT TAGTTTAATT 360 GTGTGTGGTT TGGTTATGTT TATGTTATGT TAAAATGAAA TGTATCAGCT GGATAGCTCA 4637 |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| GTGTGTGGTT TGGTTATGTT TATGTTATGT TAAAATCAAA TGTATCAGCT GGATAGCTCA 420 TTA 4634 ||| TTA 423 hqPGS_C08HBa0336I24.1-_SGN-E229636- (5056 4634) ******************************************************************************** EST sequence 109 +strand 703 n (File: SGN-E326202+) 1 TTTTCTACGA TGAAAATCGT AACCCTTACC GCGTGAAAGT CCGTGATTGT TTGGATAGTA 61 AAAAAATGGG ATTCGATTAC GCGCCAATGC CCACTCCATG GCGTAATTTC AAACCAATCA 121 GAAGGTCATC ATCAGGAAAA GTGAATACAG CGTCAATTGC ACCAGTTAGC AAGGTGTTCC 181 CACTGGCCAA GCTGGACCGT GCGATTTCGT TCTCGATCAC GCGGCCAGCT TCGTCAAGGA 241 CAACACAAGA GAAAAATGAG CAGGAGGAGA TTCTGACATT CAATAAAATG GCATATGATG 301 ATACGAAGTA TGTAAGGTTC GATGTGTTTT TGAACGTGGA CAAGACTGTG AATGCAGAAG 361 AACTTGATAA GGCGGAGTTT GCGGGGAGTT ATACTAGCTT GCCTCATGTT CATGGAAATA 421 ATGATAATCA TGTTAAGGAT GTTACTTTTA CGCTGGCGAT AACTGAACTG TTGGAGGATA 481 TTGGATTGGA AGATGAAGAT ACAATTGCGG TAACTTTGGT TCCAAAAGTT GGTGGTGAAG 541 GTGTATCCAT TGAAAGTGTG GAGATCAAGC TTGAGGATTG TTAAAGCCTT CATGAGTTGG 601 TGGCTATGGT GCCAAATTTT ATGTTTAATT AGTTTAATTT GTGTGTGGGT TGGGTTATGT 661 TTATGGTATG TTAAAATGAA ATGTATCAGC TGGATAGCTC ATT Predicted gene structure (within gDNA segment 5935 to 4025): Exon 1 5335 4635 ( 701 n); cDNA 1 703 ( 703 n); score: 0.990 MATCH C08HBa0336I24.1- SGN-E326202+ 0.990 701 0.997 C PGS_C08HBa0336I24.1-_SGN-E326202+ (5335 4635) Alignment (genomic DNA sequence = upper lines): TTTTCTACGA TGAAAATCGT AACCCTTACC GCGTGAAAGT CCGTGATTGT TTGGATAGTA 5276 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTCTACGA TGAAAATCGT AACCCTTACC GCGTGAAAGT CCGTGATTGT TTGGATAGTA 60 AAAAAATGGG ATTCGATTAC GCGCCAATGC CCACTCCATG GCGTAATTTC AAACCAATCA 5216 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAAATGGG ATTCGATTAC GCGCCAATGC CCACTCCATG GCGTAATTTC AAACCAATCA 120 GAAGGTCATC ATCAGGAAAA GTGAATACAG CGTCAATTGC ACCAGTTAGC AAGGTGTTCC 5156 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGGTCATC ATCAGGAAAA GTGAATACAG CGTCAATTGC ACCAGTTAGC AAGGTGTTCC 180 CACTGGCCAA GCTGGACCGT GCGATTTCGT TCTCGATCAC GCGGCCAGCT TCGTCAAGGA 5096 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACTGGCCAA GCTGGACCGT GCGATTTCGT TCTCGATCAC GCGGCCAGCT TCGTCAAGGA 240 CAACACAAGA GAAAAATGAG CAGGAGGAGA TTCTGACATT CAATAAAATG GCATATGATG 5036 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACACAAGA GAAAAATGAG CAGGAGGAGA TTCTGACATT CAATAAAATG GCATATGATG 300 ATACGAAGTA TGTAAGGTTC GATGTGTTTT TGAACGTGGA CAAGACTGTG AATGCAGAAG 4976 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATACGAAGTA TGTAAGGTTC GATGTGTTTT TGAACGTGGA CAAGACTGTG AATGCAGAAG 360 AACTTGATAA GGCGGAGTTT GCGGGGAGTT ATACTAGCTT GCCTCATGTT CATGGAAATA 4916 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACTTGATAA GGCGGAGTTT GCGGGGAGTT ATACTAGCTT GCCTCATGTT CATGGAAATA 420 ATGATAATCA TGTTAAGGAT GTTACTTTTA CGCTGGCGAT AACTGAACTG TTGGAGGATA 4856 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGATAATCA TGTTAAGGAT GTTACTTTTA CGCTGGCGAT AACTGAACTG TTGGAGGATA 480 TTGGATTGGA AGATGAAGAT ACAATTGCGG TAACTTTGGT TCCAAAAGTT GGTGGTGAAG 4796 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGATTGGA AGATGAAGAT ACAATTGCGG TAACTTTGGT TCCAAAAGTT GGTGGTGAAG 540 GTGTATCCAT TGAAAGTGTG GAGATCAAGC TTGAGGATTG TTAAAGCCTT CATGAGTTGG 4736 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGTATCCAT TGAAAGTGTG GAGATCAAGC TTGAGGATTG TTAAAGCCTT CATGAGTTGG 600 TGGCTATGGT GCCAAATTTT ATGTTTAATT AGTTTAA-TT GTGTGT-GGT TTGGTTATGT 4678 |||||||||| |||||||||| |||||||||| ||||||| || |||||| ||| | |||||||| TGGCTATGGT GCCAAATTTT ATGTTTAATT AGTTTAATTT GTGTGTGGGT TGGGTTATGT 660 TTATGTTATG TTAAAATGAA ATGTATCAGC TGGATAGCTC ATT 4635 ||||| |||| |||||||||| |||||||||| |||||||||| ||| TTATGGTATG TTAAAATGAA ATGTATCAGC TGGATAGCTC ATT 703 hqPGS_C08HBa0336I24.1-_SGN-E326202+ (5335 4635) ******************************************************************************** EST sequence 27 -strand 580 n (File: SGN-E279519-) 1 GTGAATACAG CGTCAATTGC ACCAGTTAGC AAGGTGTTCC CATTGGCGAA GCTGGACCGT 61 GCGATTTCGT TCTCTATCAC GCGGCCAGCC TCGTCAAGGA CAACACAAGA GAAAAATGAG 121 CAAGAGGAGA TACTGACATT CAATAAAATA TCGTATGATG ATAGGAACTA TGTAAGGTTC 181 GATGTGTTTC TGAACGTGGA CAAGACTGTG AATGCAGATG AGCTTGATAA GGCGGAGTTT 241 GCAGGGAGTT ATACTAGCTT GCCGCATGTT CATGGAAGTA ATACTAATCA TGTTACCAGT 301 GTTACTTTCA AGCTGGCGAT AACTGAACTG TTGGAGGATA TTGGATTGGA AGATGAAGAT 361 ACTATTGCGG TGACTTTGGT TCCAAAAGCT GGCGGTGAAG AAGTGTCCAT TGAAAGTGTG 421 GAGATCAAGC TTGAGGATTG TTAAAGTCTG CATGAGTTGG TGGCTATGGT GCCAAATTTT 481 ATGTTTAATT AGTATAATTA TGTGTGGTTT GAGTTATGTT TTATGTTAAA ATGTATCAGC 541 TCGATCGATA GCTGATTGCT AGTTGTGTTA ATGCTATGTA Predicted gene structure (within gDNA segment 5805 to 3233): Exon 1 5195 4685 ( 511 n); cDNA 1 511 ( 511 n); score: 0.930 MATCH C08HBa0336I24.1- SGN-E279519- 0.930 511 0.881 C PGS_C08HBa0336I24.1-_SGN-E279519- (5195 4685) Alignment (genomic DNA sequence = upper lines): GTGAATACAG CGTCAATTGC ACCAGTTAGC AAGGTGTTCC CACTGGCCAA GCTGGACCGT 5136 |||||||||| |||||||||| |||||||||| |||||||||| || |||| || |||||||||| GTGAATACAG CGTCAATTGC ACCAGTTAGC AAGGTGTTCC CATTGGCGAA GCTGGACCGT 60 GCGATTTCGT TCTCGATCAC GCGGCCAGCT TCGTCAAGGA CAACACAAGA GAAAAATGAG 5076 |||||||||| |||| ||||| ||||||||| |||||||||| |||||||||| |||||||||| GCGATTTCGT TCTCTATCAC GCGGCCAGCC TCGTCAAGGA CAACACAAGA GAAAAATGAG 120 CAGGAGGAGA TTCTGACATT CAATAAAATG GCATATGATG ATACGAAGTA TGTAAGGTTC 5016 || ||||||| | |||||||| ||||||||| | ||||||| ||| ||| || |||||||||| CAAGAGGAGA TACTGACATT CAATAAAATA TCGTATGATG ATAGGAACTA TGTAAGGTTC 180 GATGTGTTTT TGAACGTGGA CAAGACTGTG AATGCAGAAG AACTTGATAA GGCGGAGTTT 4956 ||||||||| |||||||||| |||||||||| |||||||| | | |||||||| |||||||||| GATGTGTTTC TGAACGTGGA CAAGACTGTG AATGCAGATG AGCTTGATAA GGCGGAGTTT 240 GCGGGGAGTT ATACTAGCTT GCCTCATGTT CATGGAAATA ATGATAATCA TGTTAAGGAT 4896 || ||||||| |||||||||| ||| |||||| ||||||| || || |||||| ||||| | GCAGGGAGTT ATACTAGCTT GCCGCATGTT CATGGAAGTA ATACTAATCA TGTTACCAGT 300 GTTACTTTTA CGCTGGCGAT AACTGAACTG TTGGAGGATA TTGGATTGGA AGATGAAGAT 4836 |||||||| | ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTACTTTCA AGCTGGCGAT AACTGAACTG TTGGAGGATA TTGGATTGGA AGATGAAGAT 360 ACAATTGCGG TAACTTTGGT TCCAAAAGTT GGTGGTGAAG GTGTATCCAT TGAAAGTGTG 4776 || ||||||| | |||||||| |||||||| | || ||||||| || ||||| |||||||||| ACTATTGCGG TGACTTTGGT TCCAAAAGCT GGCGGTGAAG AAGTGTCCAT TGAAAGTGTG 420 GAGATCAAGC TTGAGGATTG TTAAAGCCTT CATGAGTTGG TGGCTATGGT GCCAAATTTT 4716 |||||||||| |||||||||| |||||| || |||||||||| |||||||||| |||||||||| GAGATCAAGC TTGAGGATTG TTAAAGTCTG CATGAGTTGG TGGCTATGGT GCCAAATTTT 480 ATGTTTAATT AGTTTAATTG TGTGTGGTTT G 4685 |||||||||| ||| ||||| |||||||||| | ATGTTTAATT AGTATAATTA TGTGTGGTTT G 511 hqPGS_C08HBa0336I24.1-_SGN-E279519- (5195 4685) ******************************************************************************** EST sequence 353 +strand 392 n (File: SGN-E317625+) 1 TGCGATTTCG TTCTCGATCA CGCGGCCAGC TTCGTCAAGG ACAACACAAG AGAAAAATGA 61 GCAGGAGGAG ATTCTGACAT TCAATAAAAT GGCATATGAT GATACGAAGT ATGTAAGGTT 121 CGATGTGTTT TTGAACGTGG ACAAGACTGT GAATGCAGAA GAACTTGATA AGGCGGAGTT 181 TGCGGGGAGT TATACTAGCT TGCCTCATGT TCATGGAAAT AATGATAATC ATGTTAAGGA 241 TGTTACTTTT ACGCTGGCGA TAACTGAACT GTTGGAGGAT ATTGGATTGG AAGATGAAGA 301 TACAATTGCG GTAACTTTGG TTCCAAAAGT TGGTGGTGAA GGTGTATCCA TTGGAAGTGT 361 GGAGATCAAG CTTGATGATT GTTAAAGCCT TC Predicted gene structure (within gDNA segment 5736 to 4135): Exon 1 5136 4745 ( 392 n); cDNA 1 392 ( 392 n); score: 0.995 MATCH C08HBa0336I24.1- SGN-E317625+ 0.995 392 1.000 C PGS_C08HBa0336I24.1-_SGN-E317625+ (5136 4745) Alignment (genomic DNA sequence = upper lines): TGCGATTTCG TTCTCGATCA CGCGGCCAGC TTCGTCAAGG ACAACACAAG AGAAAAATGA 5077 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCGATTTCG TTCTCGATCA CGCGGCCAGC TTCGTCAAGG ACAACACAAG AGAAAAATGA 60 GCAGGAGGAG ATTCTGACAT TCAATAAAAT GGCATATGAT GATACGAAGT ATGTAAGGTT 5017 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGGAGGAG ATTCTGACAT TCAATAAAAT GGCATATGAT GATACGAAGT ATGTAAGGTT 120 CGATGTGTTT TTGAACGTGG ACAAGACTGT GAATGCAGAA GAACTTGATA AGGCGGAGTT 4957 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGATGTGTTT TTGAACGTGG ACAAGACTGT GAATGCAGAA GAACTTGATA AGGCGGAGTT 180 TGCGGGGAGT TATACTAGCT TGCCTCATGT TCATGGAAAT AATGATAATC ATGTTAAGGA 4897 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCGGGGAGT TATACTAGCT TGCCTCATGT TCATGGAAAT AATGATAATC ATGTTAAGGA 240 TGTTACTTTT ACGCTGGCGA TAACTGAACT GTTGGAGGAT ATTGGATTGG AAGATGAAGA 4837 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTACTTTT ACGCTGGCGA TAACTGAACT GTTGGAGGAT ATTGGATTGG AAGATGAAGA 300 TACAATTGCG GTAACTTTGG TTCCAAAAGT TGGTGGTGAA GGTGTATCCA TTGAAAGTGT 4777 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| TACAATTGCG GTAACTTTGG TTCCAAAAGT TGGTGGTGAA GGTGTATCCA TTGGAAGTGT 360 GGAGATCAAG CTTGAGGATT GTTAAAGCCT TC 4745 |||||||||| ||||| |||| |||||||||| || GGAGATCAAG CTTGATGATT GTTAAAGCCT TC 392 hqPGS_C08HBa0336I24.1-_SGN-E317625+ (5136 4745) ******************************************************************************** EST sequence 318 +strand 472 n (File: SGN-E390549+) 1 ACCAATCAGA AGGTCATCAT CAGGAAAAGT GAATACAGCG TCAATTGCAC CAGTTAGCAA 61 GGTGTTCCCA CTGGCCAAGC TGGACCGTGC GATTTCGTTC TCGATCACGC GGCCAGCTTC 121 GTCAAGGACA ACACAAGAGA AAAATGAGCA GGAGGAGATT CTGACATTCA ATAAAATGGC 181 ATATGATGAT ACGAAGTATG TAAGGTTCGA TGTGTTTTTG AACGTGGACA AGACTGTGAA 241 TGCAGAAGAA CTTGATAAGG CGGAGTTTGC GGGGAGTTAT ACTAGCTTGC CTCATGTTCA 301 TGGAAATAAT GATAATCATG TTAAGGATGT TACTTTTACG CTGGCGATAA CTGAACTGTT 361 GGAGGATATT GGATTGGAAG ATGAAGATAC AATTGCGGTA ACTTTGGTTC CAAAAGTTGG 421 TGGTGAAGGT GTATCCATTG AAAGTGTGGA GATCAAGCTT GAGGATTGTT AA Predicted gene structure (within gDNA segment 5823 to 4142): Exon 1 5223 4752 ( 472 n); cDNA 1 472 ( 472 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E390549+ 1.000 472 1.000 C PGS_C08HBa0336I24.1-_SGN-E390549+ (5223 4752) Alignment (genomic DNA sequence = upper lines): ACCAATCAGA AGGTCATCAT CAGGAAAAGT GAATACAGCG TCAATTGCAC CAGTTAGCAA 5164 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAATCAGA AGGTCATCAT CAGGAAAAGT GAATACAGCG TCAATTGCAC CAGTTAGCAA 60 GGTGTTCCCA CTGGCCAAGC TGGACCGTGC GATTTCGTTC TCGATCACGC GGCCAGCTTC 5104 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGTTCCCA CTGGCCAAGC TGGACCGTGC GATTTCGTTC TCGATCACGC GGCCAGCTTC 120 GTCAAGGACA ACACAAGAGA AAAATGAGCA GGAGGAGATT CTGACATTCA ATAAAATGGC 5044 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCAAGGACA ACACAAGAGA AAAATGAGCA GGAGGAGATT CTGACATTCA ATAAAATGGC 180 ATATGATGAT ACGAAGTATG TAAGGTTCGA TGTGTTTTTG AACGTGGACA AGACTGTGAA 4984 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATGATGAT ACGAAGTATG TAAGGTTCGA TGTGTTTTTG AACGTGGACA AGACTGTGAA 240 TGCAGAAGAA CTTGATAAGG CGGAGTTTGC GGGGAGTTAT ACTAGCTTGC CTCATGTTCA 4924 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCAGAAGAA CTTGATAAGG CGGAGTTTGC GGGGAGTTAT ACTAGCTTGC CTCATGTTCA 300 TGGAAATAAT GATAATCATG TTAAGGATGT TACTTTTACG CTGGCGATAA CTGAACTGTT 4864 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGAAATAAT GATAATCATG TTAAGGATGT TACTTTTACG CTGGCGATAA CTGAACTGTT 360 GGAGGATATT GGATTGGAAG ATGAAGATAC AATTGCGGTA ACTTTGGTTC CAAAAGTTGG 4804 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAGGATATT GGATTGGAAG ATGAAGATAC AATTGCGGTA ACTTTGGTTC CAAAAGTTGG 420 TGGTGAAGGT GTATCCATTG AAAGTGTGGA GATCAAGCTT GAGGATTGTT AA 4752 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || TGGTGAAGGT GTATCCATTG AAAGTGTGGA GATCAAGCTT GAGGATTGTT AA 472 hqPGS_C08HBa0336I24.1-_SGN-E390549+ (5223 4752) ******************************************************************************** EST sequence 278 +strand 529 n (File: SGN-E236547+) 1 ACGATGAAAA TCGTAACCCT TACCGCGTGA AAGTCCGTGA TTGTTTGGAT AGTAAAAAAA 61 TGGGATTCGA TTACGCGCCA ATGCCCACTC CATGGCGTAA TTTCAAACCA ATCAGAAGGT 121 CATCATCAGG AAAAGTGAAT ACAGCGTCAA TTGCACCAGT TAGCAAGGTG TTCCCACTGG 181 CCAAGCTGGA CCGTGCGATT TCGTTCTCGA TCACGCGGCC AGCTTCGTCA AGGACAACAC 241 AAGAGAAAAA TGAGCAGGAG GAGATTCTGA CATTCAATAA AATGGCATAT GATGATACGA 301 AGTATGTAAG GTTCGATGTG TTTTTGAACG TGGACAAGAC TGTGAATGCA GAAGAACTTG 361 ATAAGGCGGA GTTTGCGGGG AGTTATACTA GCTTGCCTCA TGTTCATGGA AATAATGATA 421 ATCATGTTAA GGATGTTACT TTTACGCTGG CGATAACTGA ACTGTTGGAG GATATTGGAT 481 TGGAAGATGA AGATACATTT GCGGTAACTT TGGTTCCAAA AGTTGGTGG Predicted gene structure (within gDNA segment 5929 to 4191): Exon 1 5329 4801 ( 529 n); cDNA 1 529 ( 529 n); score: 0.998 MATCH C08HBa0336I24.1- SGN-E236547+ 0.998 529 1.000 C PGS_C08HBa0336I24.1-_SGN-E236547+ (5329 4801) Alignment (genomic DNA sequence = upper lines): ACGATGAAAA TCGTAACCCT TACCGCGTGA AAGTCCGTGA TTGTTTGGAT AGTAAAAAAA 5270 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACGATGAAAA TCGTAACCCT TACCGCGTGA AAGTCCGTGA TTGTTTGGAT AGTAAAAAAA 60 TGGGATTCGA TTACGCGCCA ATGCCCACTC CATGGCGTAA TTTCAAACCA ATCAGAAGGT 5210 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGGATTCGA TTACGCGCCA ATGCCCACTC CATGGCGTAA TTTCAAACCA ATCAGAAGGT 120 CATCATCAGG AAAAGTGAAT ACAGCGTCAA TTGCACCAGT TAGCAAGGTG TTCCCACTGG 5150 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCATCAGG AAAAGTGAAT ACAGCGTCAA TTGCACCAGT TAGCAAGGTG TTCCCACTGG 180 CCAAGCTGGA CCGTGCGATT TCGTTCTCGA TCACGCGGCC AGCTTCGTCA AGGACAACAC 5090 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAAGCTGGA CCGTGCGATT TCGTTCTCGA TCACGCGGCC AGCTTCGTCA AGGACAACAC 240 AAGAGAAAAA TGAGCAGGAG GAGATTCTGA CATTCAATAA AATGGCATAT GATGATACGA 5030 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGAGAAAAA TGAGCAGGAG GAGATTCTGA CATTCAATAA AATGGCATAT GATGATACGA 300 AGTATGTAAG GTTCGATGTG TTTTTGAACG TGGACAAGAC TGTGAATGCA GAAGAACTTG 4970 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTATGTAAG GTTCGATGTG TTTTTGAACG TGGACAAGAC TGTGAATGCA GAAGAACTTG 360 ATAAGGCGGA GTTTGCGGGG AGTTATACTA GCTTGCCTCA TGTTCATGGA AATAATGATA 4910 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAAGGCGGA GTTTGCGGGG AGTTATACTA GCTTGCCTCA TGTTCATGGA AATAATGATA 420 ATCATGTTAA GGATGTTACT TTTACGCTGG CGATAACTGA ACTGTTGGAG GATATTGGAT 4850 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCATGTTAA GGATGTTACT TTTACGCTGG CGATAACTGA ACTGTTGGAG GATATTGGAT 480 TGGAAGATGA AGATACAATT GCGGTAACTT TGGTTCCAAA AGTTGGTGG 4801 |||||||||| ||||||| || |||||||||| |||||||||| ||||||||| TGGAAGATGA AGATACATTT GCGGTAACTT TGGTTCCAAA AGTTGGTGG 529 hqPGS_C08HBa0336I24.1-_SGN-E236547+ (5329 4801) ******************************************************************************** EST sequence 238 +strand 351 n (File: SGN-E336881+) 1 TCAATTGCAC CAGTTAGCAA GGTGTTCCCA CTGGCCAAGC TGGACCGTGC GATTTCGTTC 61 TCGATCACGC GGCCAGCTTC GTCAAGGACA ACACAAGAGA AAAATGAGCA GGAGGAGATT 121 CTGACATTCA ATAAAATGGC ATATGATGAT ACGAAGTATG TAAGGTTCGA TGTGTTTTTG 181 AACGTGGACA AGACTGTGAA TGCAGAAGAA CTTGATAAGG CGGAGTTTGC GGGGAGTTAT 241 ACTAGCTTGC CTCATGTTCA TGGAAATAAT GATAATCATG TTAAGGATGT TACTTTTACG 301 CTGGCGATAA CTGAACTGTT GGAGGATATT GGATTGGAAG ATGAAGATAC A Predicted gene structure (within gDNA segment 5783 to 4223): Exon 1 5183 4833 ( 351 n); cDNA 1 351 ( 351 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E336881+ 1.000 351 1.000 C PGS_C08HBa0336I24.1-_SGN-E336881+ (5183 4833) Alignment (genomic DNA sequence = upper lines): TCAATTGCAC CAGTTAGCAA GGTGTTCCCA CTGGCCAAGC TGGACCGTGC GATTTCGTTC 5124 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAATTGCAC CAGTTAGCAA GGTGTTCCCA CTGGCCAAGC TGGACCGTGC GATTTCGTTC 60 TCGATCACGC GGCCAGCTTC GTCAAGGACA ACACAAGAGA AAAATGAGCA GGAGGAGATT 5064 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGATCACGC GGCCAGCTTC GTCAAGGACA ACACAAGAGA AAAATGAGCA GGAGGAGATT 120 CTGACATTCA ATAAAATGGC ATATGATGAT ACGAAGTATG TAAGGTTCGA TGTGTTTTTG 5004 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGACATTCA ATAAAATGGC ATATGATGAT ACGAAGTATG TAAGGTTCGA TGTGTTTTTG 180 AACGTGGACA AGACTGTGAA TGCAGAAGAA CTTGATAAGG CGGAGTTTGC GGGGAGTTAT 4944 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACGTGGACA AGACTGTGAA TGCAGAAGAA CTTGATAAGG CGGAGTTTGC GGGGAGTTAT 240 ACTAGCTTGC CTCATGTTCA TGGAAATAAT GATAATCATG TTAAGGATGT TACTTTTACG 4884 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTAGCTTGC CTCATGTTCA TGGAAATAAT GATAATCATG TTAAGGATGT TACTTTTACG 300 CTGGCGATAA CTGAACTGTT GGAGGATATT GGATTGGAAG ATGAAGATAC A 4833 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | CTGGCGATAA CTGAACTGTT GGAGGATATT GGATTGGAAG ATGAAGATAC A 351 hqPGS_C08HBa0336I24.1-_SGN-E336881+ (5183 4833) ******************************************************************************** EST sequence 182 +strand 556 n (File: SGN-E317358+) 1 TGGACAGGAT GTGGAACGAG TGGAAATTAA TTGGCGGGAA AAGAAGGGAT TTATCAAATA 61 AAGATTGGTT GAACTCTGAA TTCTTTTTCT ACGATGAAAA TCGTAACCCT TACCGCGTGA 121 AAGTCCGTGA TTGTTTGGAT AGTAAAAAAT GGGATTCGAT TACGCGCCAA TGCCCACTCC 181 ATGGCGTAAT TTCAAACCAA TCAGAAGGTC ATCATCAGGA AAAGTGAATA CAGCGTCAAT 241 TGCACCAGTT AGCAAGGTGT TCCCACTGGC CAAGCTGGAC CGTGCGATTT CGTTCTCGAT 301 CACGCGGCCA GCTTCGTCAA GGACAACACA AGAGAAAAAT GAGCAGGAGG AGATTCTGAC 361 ATTTCAATAA ATGGCATATG ATGATACGAA GTATGTAAGG TTCGATGTGT TTTTTGACGT 421 GGGACAGACT GTGAATGCAG AAGAACTTTG ATAGGCGGAG TTTGCGGGGA GTTATACTAG 481 CTTGCCTCAT GTTCATGGAA ATAATGATAA TCATGGTAAA GGATGTACTT TTACGCTGGC 541 GATAACTGAA CTGTTG Predicted gene structure (within gDNA segment 6019 to 4253): Exon 1 5419 4863 ( 557 n); cDNA 1 556 ( 556 n); score: 0.969 MATCH C08HBa0336I24.1- SGN-E317358+ 0.969 557 1.002 C PGS_C08HBa0336I24.1-_SGN-E317358+ (5419 4863) Alignment (genomic DNA sequence = upper lines): TGGACAGGAT GTGGAACGAG TGGAAATTAA TTGGCGGGAA AAGAAGGGAT TTATCAAATA 5360 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGACAGGAT GTGGAACGAG TGGAAATTAA TTGGCGGGAA AAGAAGGGAT TTATCAAATA 60 AAGATTGGTT GAACTCTGAA TTCTTTTTCT ACGATGAAAA TCGTAACCCT TACCGCGTGA 5300 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGATTGGTT GAACTCTGAA TTCTTTTTCT ACGATGAAAA TCGTAACCCT TACCGCGTGA 120 AAGTCCGTGA TTGTTTGGAT AGTAAAAAAA TGGGATTCGA TTACGCGCCA ATGCCCACTC 5240 |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| AAGTCCGTGA TTGTTTGGAT AGT-AAAAAA TGGGATTCGA TTACGCGCCA ATGCCCACTC 179 CATGGCGTAA TTTCAAACCA ATCAGAAGGT CATCATCAGG AAAAGTGAAT ACAGCGTCAA 5180 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGGCGTAA TTTCAAACCA ATCAGAAGGT CATCATCAGG AAAAGTGAAT ACAGCGTCAA 239 TTGCACCAGT TAGCAAGGTG TTCCCACTGG CCAAGCTGGA CCGTGCGATT TCGTTCTCGA 5120 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCACCAGT TAGCAAGGTG TTCCCACTGG CCAAGCTGGA CCGTGCGATT TCGTTCTCGA 299 TCACGCGGCC AGCTTCGTCA AGGACAACAC AAGAGAAAAA TGAGCAGGAG GAGATTCTGA 5060 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACGCGGCC AGCTTCGTCA AGGACAACAC AAGAGAAAAA TGAGCAGGAG GAGATTCTGA 359 CA-TTCAATA AAATGGCATA TGATGATACG AAGTATGTAA GGTTCGATGT GTTTTTGAAC 5001 || |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| || CATTTCAAT- AAATGGCATA TGATGATACG AAGTATGTAA GGTTCGATGT GTTTTTTGAC 418 GTGGACAAGA CTGTGAATGC AGAAGAAC-T TGATAAGGCG GAGTTTGCGG GGAGTTATAC 4942 |||| ||| |||||||||| |||||||| | |||| ||||| |||||||||| |||||||||| GTGGGACAGA CTGTGAATGC AGAAGAACTT TGAT-AGGCG GAGTTTGCGG GGAGTTATAC 477 TAGCTTGCCT CATGTTCATG GAAATAATGA TAATCAT-GT TAAGGATGTT ACTTTTACGC 4883 |||||||||| |||||||||| |||||||||| ||||||| || ||||||| | |||||||||| TAGCTTGCCT CATGTTCATG GAAATAATGA TAATCATGGT AAAGGATG-T ACTTTTACGC 536 TGGCGATAAC TGAACTGTTG 4863 |||||||||| |||||||||| TGGCGATAAC TGAACTGTTG 556 hqPGS_C08HBa0336I24.1-_SGN-E317358+ (5419 4863) ******************************************************************************** EST sequence 148 +strand 433 n (File: SGN-E216715+) 1 GGCTCCTTTC CGCGTGAAAG TCCGTGATTG TTTGGATAGT AAAAAAATGG GATTCGATTA 61 CGCGCCAATG CCCACTCCAT GGCGTAATTT CAAACCAATC AGAAGGTCAT CATCAGGAAA 121 AGTGAATACA GCGTCAATTG CACCAGTTAG CAAGGTGTTC CCACTGGCCA AGCTGGACCG 181 TGCGATTTCG TTCTCGATCA CGCGGCCAGC TTCGTCAAGG ACAACACAAG AGAAAAATGA 241 GCAGGAGGAG ATTCTGACAT TCAATAAAAT GGCATATGAT GATACGAAGT ATGTAAGGTT 301 CGATGTGTTT TTGAACGTGG ACAAGACTGT GAATGCAGAA GAACTTGATA AGGCGGAGTT 361 TTGCGGGGAG TTATACTAGC TTGCCTCATG TTCATGGAAA TAATGATAAT TATGTTAAGG 421 ATGTTACTTT TAC Predicted gene structure (within gDNA segment 5997 to 4275): Exon 1 5312 4885 ( 428 n); cDNA 5 433 ( 429 n); score: 0.989 MATCH C08HBa0336I24.1- SGN-E216715+ 0.989 428 0.988 C PGS_C08HBa0336I24.1-_SGN-E216715+ (5312 4885) Alignment (genomic DNA sequence = upper lines): CCTTACCGCG TGAAAGTCCG TGATTGTTTG GATAGTAAAA AAATGGGATT CGATTACGCG 5253 |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTTCCGCG TGAAAGTCCG TGATTGTTTG GATAGTAAAA AAATGGGATT CGATTACGCG 64 CCAATGCCCA CTCCATGGCG TAATTTCAAA CCAATCAGAA GGTCATCATC AGGAAAAGTG 5193 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAATGCCCA CTCCATGGCG TAATTTCAAA CCAATCAGAA GGTCATCATC AGGAAAAGTG 124 AATACAGCGT CAATTGCACC AGTTAGCAAG GTGTTCCCAC TGGCCAAGCT GGACCGTGCG 5133 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATACAGCGT CAATTGCACC AGTTAGCAAG GTGTTCCCAC TGGCCAAGCT GGACCGTGCG 184 ATTTCGTTCT CGATCACGCG GCCAGCTTCG TCAAGGACAA CACAAGAGAA AAATGAGCAG 5073 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTCGTTCT CGATCACGCG GCCAGCTTCG TCAAGGACAA CACAAGAGAA AAATGAGCAG 244 GAGGAGATTC TGACATTCAA TAAAATGGCA TATGATGATA CGAAGTATGT AAGGTTCGAT 5013 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGGAGATTC TGACATTCAA TAAAATGGCA TATGATGATA CGAAGTATGT AAGGTTCGAT 304 GTGTTTTTGA ACGTGGACAA GACTGTGAAT GCAGAAGAAC TTGATAAGGC GGAG-TTTGC 4954 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| GTGTTTTTGA ACGTGGACAA GACTGTGAAT GCAGAAGAAC TTGATAAGGC GGAGTTTTGC 364 GGGGAGTTAT ACTAGCTTGC CTCATGTTCA TGGAAATAAT GATAATCATG TTAAGGATGT 4894 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| GGGGAGTTAT ACTAGCTTGC CTCATGTTCA TGGAAATAAT GATAATTATG TTAAGGATGT 424 TACTTTTAC 4885 ||||||||| TACTTTTAC 433 hqPGS_C08HBa0336I24.1-_SGN-E216715+ (5312 4885) ******************************************************************************** EST sequence 120 +strand 641 n (File: SGN-E242875+) 1 CAAAATCATC GCAATGGAAC TATTATTGAT CTTGGTCATT TTGGTAAGGA CGTCGAAACA 61 CCTCAGCTAC AGATAATGAC TAATAATTTA ACACTAATGT ACCGTCAAAT GGTTACTAAT 121 GCTCCTTGCC CGTCTCAATT CTTCGGTGCT GCTTACCCTC TGGGTTCTGA TCCAGAACCA 181 GGCATGGGTA CTATTGAGAA TATTCCTCAT ACACCGGTCC ATATCTGGAC CGGTGATAGT 241 CCTAGACAAG GACACGGTGA AGACATGGGT AATTTCTATT CAGCTGGTTT AGACCCGCTT 301 TTCTACTGTC ACCATGCTAA TGTGGACAGG ATGTGGAACG AGTGGAAATT AATTGGCGGG 361 AAAAGAAGGG ATTTATCAAA TAAAGATTGG TTGAACTCTG AATTCTTTTT CTACGATGAA 421 AATCGTAACC CTTACCGCGT GAAAGTCCGT GATTGTTTGG ATAGTAAAAA AATGGGATTC 481 GATTACGCGC CAATGCCCAC TCCATGGCGT AATTTCAAAC CAATCAGAAG GTCATCATCA 541 GGAAAAGTGA ATACAGCGTC AATTGCACCA GTTAGCAAGG TGTTCCCACT GGCCAAGCTG 601 GACCGTGCGA TTTCGTTCTC GATCACGCGG CCAGCTTCGT C Predicted gene structure (within gDNA segment 6341 to 4491): Exon 1 5741 5101 ( 641 n); cDNA 1 641 ( 641 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E242875+ 1.000 641 1.000 C PGS_C08HBa0336I24.1-_SGN-E242875+ (5741 5101) Alignment (genomic DNA sequence = upper lines): CAAAATCATC GCAATGGAAC TATTATTGAT CTTGGTCATT TTGGTAAGGA CGTCGAAACA 5682 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAATCATC GCAATGGAAC TATTATTGAT CTTGGTCATT TTGGTAAGGA CGTCGAAACA 60 CCTCAGCTAC AGATAATGAC TAATAATTTA ACACTAATGT ACCGTCAAAT GGTTACTAAT 5622 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCAGCTAC AGATAATGAC TAATAATTTA ACACTAATGT ACCGTCAAAT GGTTACTAAT 120 GCTCCTTGCC CGTCTCAATT CTTCGGTGCT GCTTACCCTC TGGGTTCTGA TCCAGAACCA 5562 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTCCTTGCC CGTCTCAATT CTTCGGTGCT GCTTACCCTC TGGGTTCTGA TCCAGAACCA 180 GGCATGGGTA CTATTGAGAA TATTCCTCAT ACACCGGTCC ATATCTGGAC CGGTGATAGT 5502 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCATGGGTA CTATTGAGAA TATTCCTCAT ACACCGGTCC ATATCTGGAC CGGTGATAGT 240 CCTAGACAAG GACACGGTGA AGACATGGGT AATTTCTATT CAGCTGGTTT AGACCCGCTT 5442 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTAGACAAG GACACGGTGA AGACATGGGT AATTTCTATT CAGCTGGTTT AGACCCGCTT 300 TTCTACTGTC ACCATGCTAA TGTGGACAGG ATGTGGAACG AGTGGAAATT AATTGGCGGG 5382 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTACTGTC ACCATGCTAA TGTGGACAGG ATGTGGAACG AGTGGAAATT AATTGGCGGG 360 AAAAGAAGGG ATTTATCAAA TAAAGATTGG TTGAACTCTG AATTCTTTTT CTACGATGAA 5322 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAGAAGGG ATTTATCAAA TAAAGATTGG TTGAACTCTG AATTCTTTTT CTACGATGAA 420 AATCGTAACC CTTACCGCGT GAAAGTCCGT GATTGTTTGG ATAGTAAAAA AATGGGATTC 5262 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATCGTAACC CTTACCGCGT GAAAGTCCGT GATTGTTTGG ATAGTAAAAA AATGGGATTC 480 GATTACGCGC CAATGCCCAC TCCATGGCGT AATTTCAAAC CAATCAGAAG GTCATCATCA 5202 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATTACGCGC CAATGCCCAC TCCATGGCGT AATTTCAAAC CAATCAGAAG GTCATCATCA 540 GGAAAAGTGA ATACAGCGTC AATTGCACCA GTTAGCAAGG TGTTCCCACT GGCCAAGCTG 5142 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAAAAGTGA ATACAGCGTC AATTGCACCA GTTAGCAAGG TGTTCCCACT GGCCAAGCTG 600 GACCGTGCGA TTTCGTTCTC GATCACGCGG CCAGCTTCGT C 5101 |||||||||| |||||||||| |||||||||| |||||||||| | GACCGTGCGA TTTCGTTCTC GATCACGCGG CCAGCTTCGT C 641 hqPGS_C08HBa0336I24.1-_SGN-E242875+ (5741 5101) ******************************************************************************** EST sequence 329 +strand 519 n (File: SGN-E323261+) 1 TCTTCAAAGA GACGGGCGTC CTTCTGTCTA TAGCAAGTTT GCTTACCCTC TGGGTTCTGA 61 TGCAGAACCA GGCATGGGTA CTATTGAGAA TATTCCTCAT ACACCGGTCC ATATCTGGAC 121 CGGTGATAGT CCTAGACAAG GACACGGTGA AGACATGGGT AATTTCTATT CAACTGGTTT 181 ATACCCGCTT TTCTACTGTC ACCATGCTAA TGTGGACAGG ATGTGGAACG AGTGGAAATT 241 AATTGGCGGG AAAAGAAGGG ATTTATCAGA TAAAGATTGG CTGAACTCTG AATTCTTTTT 301 CTACGATGAA AATCGTAACC CTTACCGCGT GAAAGTCCGT GATTGTTTGG ATAGTAAAAC 361 AATGGGATTC GATTACACGC CAATGCCCAC TCCATGGCGT AATTTCGAAC CAATCAGAAG 421 GTCATCATCA AGAAAAGTGA ATACAGCGTC AATTGCACCA GGTATCAACG TGTTCCCACT 481 GGCCAAGCTG GACCGTGCGA TTTCGTTCTC GATCACGCG Predicted gene structure (within gDNA segment 6582 to 4503): Exon 1 5592 5113 ( 480 n); cDNA 40 519 ( 480 n); score: 0.975 MATCH C08HBa0336I24.1- SGN-E323261+ 0.975 480 0.925 C PGS_C08HBa0336I24.1-_SGN-E323261+ (5592 5113) Alignment (genomic DNA sequence = upper lines): TGCTTACCCT CTGGGTTCTG ATCCAGAACC AGGCATGGGT ACTATTGAGA ATATTCCTCA 5533 |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| TGCTTACCCT CTGGGTTCTG ATGCAGAACC AGGCATGGGT ACTATTGAGA ATATTCCTCA 99 TACACCGGTC CATATCTGGA CCGGTGATAG TCCTAGACAA GGACACGGTG AAGACATGGG 5473 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACACCGGTC CATATCTGGA CCGGTGATAG TCCTAGACAA GGACACGGTG AAGACATGGG 159 TAATTTCTAT TCAGCTGGTT TAGACCCGCT TTTCTACTGT CACCATGCTA ATGTGGACAG 5413 |||||||||| ||| |||||| || ||||||| |||||||||| |||||||||| |||||||||| TAATTTCTAT TCAACTGGTT TATACCCGCT TTTCTACTGT CACCATGCTA ATGTGGACAG 219 GATGTGGAAC GAGTGGAAAT TAATTGGCGG GAAAAGAAGG GATTTATCAA ATAAAGATTG 5353 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| GATGTGGAAC GAGTGGAAAT TAATTGGCGG GAAAAGAAGG GATTTATCAG ATAAAGATTG 279 GTTGAACTCT GAATTCTTTT TCTACGATGA AAATCGTAAC CCTTACCGCG TGAAAGTCCG 5293 | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTGAACTCT GAATTCTTTT TCTACGATGA AAATCGTAAC CCTTACCGCG TGAAAGTCCG 339 TGATTGTTTG GATAGTAAAA AAATGGGATT CGATTACGCG CCAATGCCCA CTCCATGGCG 5233 |||||||||| |||||||||| ||||||||| ||||||| || |||||||||| |||||||||| TGATTGTTTG GATAGTAAAA CAATGGGATT CGATTACACG CCAATGCCCA CTCCATGGCG 399 TAATTTCAAA CCAATCAGAA GGTCATCATC AGGAAAAGTG AATACAGCGT CAATTGCACC 5173 ||||||| || |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| TAATTTCGAA CCAATCAGAA GGTCATCATC AAGAAAAGTG AATACAGCGT CAATTGCACC 459 AGTTAGCAAG GTGTTCCCAC TGGCCAAGCT GGACCGTGCG ATTTCGTTCT CGATCACGCG 5113 || || ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGTATCAAC GTGTTCCCAC TGGCCAAGCT GGACCGTGCG ATTTCGTTCT CGATCACGCG 519 hqPGS_C08HBa0336I24.1-_SGN-E323261+ (5592 5113) ******************************************************************************** EST sequence 268 +strand 400 n (File: SGN-E319717+) 1 TCACATCTGG ACCGGTGACA AACCTCGTCA AAAAAACGGG GAAGACATGG GTAATTTCTA 61 CTCAGCCGGT TTAGATCCGA TTTTTTACTG CCACCATGCC AATGTGGACA GGATGTGGAA 121 TGAATGGAAA TTAATTGGCG GGAAAAGAAG GGATTTAACA GATAAAGATT GGTTGAACTC 181 TGAATTCTTT TTCTACGATG AAAATCGTAA CCCTTACCGT GTGAAAGTCC GTGACTGTTT 241 GGACAGTAAA AAAATGGGAT TCGATTACGC GCCATTGCCC ACTCCATGGC GTTATTTTAA 301 ACCAATCAGA AAGTCATCAT CAGGAAAAGT GAATACAGCG TCAATTGCAC CAGTTAGCAT 361 GGTGTTCCCA TTGGCGAAGC TGGACCGTGC GATTTCGTTC Predicted gene structure (within gDNA segment 7239 to 4514): Exon 1 5522 5124 ( 399 n); cDNA 2 400 ( 399 n); score: 0.922 MATCH C08HBa0336I24.1- SGN-E319717+ 0.922 399 0.998 C PGS_C08HBa0336I24.1-_SGN-E319717+ (5522 5124) Alignment (genomic DNA sequence = upper lines): CATATCTGGA CCGGTGATAG TCCTAGACAA GGACACGGTG AAGACATGGG TAATTTCTAT 5463 || ||||||| ||||||| | ||| | ||| | |||| | |||||||||| ||||||||| CACATCTGGA CCGGTGACAA ACCTCGTCAA AAAAACGGGG AAGACATGGG TAATTTCTAC 61 TCAGCTGGTT TAGACCCGCT TTTCTACTGT CACCATGCTA ATGTGGACAG GATGTGGAAC 5403 ||||| |||| |||| ||| | ||| ||||| |||||||| | |||||||||| ||||||||| TCAGCCGGTT TAGATCCGAT TTTTTACTGC CACCATGCCA ATGTGGACAG GATGTGGAAT 121 GAGTGGAAAT TAATTGGCGG GAAAAGAAGG GATTTATCAA ATAAAGATTG GTTGAACTCT 5343 || ||||||| |||||||||| |||||||||| |||||| || |||||||||| |||||||||| GAATGGAAAT TAATTGGCGG GAAAAGAAGG GATTTAACAG ATAAAGATTG GTTGAACTCT 181 GAATTCTTTT TCTACGATGA AAATCGTAAC CCTTACCGCG TGAAAGTCCG TGATTGTTTG 5283 |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| ||| |||||| GAATTCTTTT TCTACGATGA AAATCGTAAC CCTTACCGTG TGAAAGTCCG TGACTGTTTG 241 GATAGTAAAA AAATGGGATT CGATTACGCG CCAATGCCCA CTCCATGGCG TAATTTCAAA 5223 || ||||||| |||||||||| |||||||||| ||| |||||| |||||||||| | |||| ||| GACAGTAAAA AAATGGGATT CGATTACGCG CCATTGCCCA CTCCATGGCG TTATTTTAAA 301 CCAATCAGAA GGTCATCATC AGGAAAAGTG AATACAGCGT CAATTGCACC AGTTAGCAAG 5163 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||| | CCAATCAGAA AGTCATCATC AGGAAAAGTG AATACAGCGT CAATTGCACC AGTTAGCATG 361 GTGTTCCCAC TGGCCAAGCT GGACCGTGCG ATTTCGTTC 5124 ||||||||| |||| ||||| |||||||||| ||||||||| GTGTTCCCAT TGGCGAAGCT GGACCGTGCG ATTTCGTTC 400 hqPGS_C08HBa0336I24.1-_SGN-E319717+ (5522 5124) ******************************************************************************** EST sequence 285 +strand 367 n (File: SGN-E290525+) 1 GCTGGACCGG TGACAAACCT CGTCAAAAAA ACGGTGAAGA CATGGGTAAT TTCTACTCAG 61 CCGGTTTAGA TCCGATTTTT TACTGCCACC ATGCCAATGT GGACAGGATG TGGAATGAAT 121 GGAAATTAAT TGGCGGGAAA AGAAGGGATT TAACAGATAA AGATTGGTTG AACTCTGAAT 181 TCTTTTTCTA CGATGAAAAT CGTAACCCTT ACCGTGTGAA AGTCCGTGAC TGTTTGGACA 241 GTAAAAAAAT GGGATTCGAT TACGCGCCAA TGCCCACTCC ATGGCGTAAT TTTAAACCAA 301 TCAGAAAGTC ATCATCAGGA AAAGTGAATA CAGCGTCTAT TGCACCAGTT AGCAAGGTGT 361 TGCCATT Predicted gene structure (within gDNA segment 7189 to 4488): Exon 1 5517 5154 ( 364 n); cDNA 2 365 ( 364 n); score: 0.929 MATCH C08HBa0336I24.1- SGN-E290525+ 0.929 364 0.992 C PGS_C08HBa0336I24.1-_SGN-E290525+ (5517 5154) Alignment (genomic DNA sequence = upper lines): CTGGACCGGT GATAGTCCTA GACAAGGACA CGGTGAAGAC ATGGGTAATT TCTATTCAGC 5458 |||||||||| || | ||| | ||| | | |||||||||| |||||||||| |||| ||||| CTGGACCGGT GACAAACCTC GTCAAAAAAA CGGTGAAGAC ATGGGTAATT TCTACTCAGC 61 TGGTTTAGAC CCGCTTTTCT ACTGTCACCA TGCTAATGTG GACAGGATGT GGAACGAGTG 5398 |||||||| ||| |||| | |||| ||||| ||| |||||| |||||||||| |||| || || CGGTTTAGAT CCGATTTTTT ACTGCCACCA TGCCAATGTG GACAGGATGT GGAATGAATG 121 GAAATTAATT GGCGGGAAAA GAAGGGATTT ATCAAATAAA GATTGGTTGA ACTCTGAATT 5338 |||||||||| |||||||||| |||||||||| | || ||||| |||||||||| |||||||||| GAAATTAATT GGCGGGAAAA GAAGGGATTT AACAGATAAA GATTGGTTGA ACTCTGAATT 181 CTTTTTCTAC GATGAAAATC GTAACCCTTA CCGCGTGAAA GTCCGTGATT GTTTGGATAG 5278 |||||||||| |||||||||| |||||||||| ||| |||||| |||||||| | ||||||| || CTTTTTCTAC GATGAAAATC GTAACCCTTA CCGTGTGAAA GTCCGTGACT GTTTGGACAG 241 TAAAAAAATG GGATTCGATT ACGCGCCAAT GCCCACTCCA TGGCGTAATT TCAAACCAAT 5218 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| TAAAAAAATG GGATTCGATT ACGCGCCAAT GCCCACTCCA TGGCGTAATT TTAAACCAAT 301 CAGAAGGTCA TCATCAGGAA AAGTGAATAC AGCGTCAATT GCACCAGTTA GCAAGGTGTT 5158 ||||| |||| |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| CAGAAAGTCA TCATCAGGAA AAGTGAATAC AGCGTCTATT GCACCAGTTA GCAAGGTGTT 361 CCCA 5154 ||| GCCA 365 hqPGS_C08HBa0336I24.1-_SGN-E290525+ (5517 5154) ******************************************************************************** EST sequence 355 +strand 578 n (File: SGN-E241903+) 1 CAAAATCATC GCAATGGAAC TATTATTGAT CTTGGTCATT TTGGTAAGGA CGTCGAAACA 61 CCTCAGCTAC AGATAATGAC TAATAATTTA ACACTAATGT ACCGTCAAAT GGTTACTAAT 121 GCTCCTTGCC CGTCTCAATT CTTCGGTGCT GCTTACCCTC TGGGTTCTGA TCCAGAACCA 181 GGCATGGGTA CTATTGAGAA TATTCCTCAT ACACCGGTCC ATATCTGGAC CGGTGATAGT 241 CCTAGACAAG GACACGGTGA AGACATGGGT AATTTCTATT CAGCTGGTTT AGACCCGCTT 301 TTCTACTGTC ACCATGCTAA TGTGGACAGG ATGTGGAACG AGTGGAAATT AATTGGCGGG 361 AAAAGAAGGG ATTTATCAAA TAAAGATTGG TTGAACTCTG AATTCTTTTT CTACGATGAA 421 AATCGTAACC CTTACCGCGT GAAAGTCCGT GATTGTTTGG ATAGTAAAAA AATGGGATTC 481 GATTACGCGC CAATGCCCAC TCCATGGCGT AATTTCAAAC CAATCAGAAG GTCATCATCA 541 GGAAAAGTGA ATACAGCGTC AATTGCACCA GTTAGCAA Predicted gene structure (within gDNA segment 6341 to 4554): Exon 1 5741 5164 ( 578 n); cDNA 1 578 ( 578 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E241903+ 1.000 578 1.000 C PGS_C08HBa0336I24.1-_SGN-E241903+ (5741 5164) Alignment (genomic DNA sequence = upper lines): CAAAATCATC GCAATGGAAC TATTATTGAT CTTGGTCATT TTGGTAAGGA CGTCGAAACA 5682 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAATCATC GCAATGGAAC TATTATTGAT CTTGGTCATT TTGGTAAGGA CGTCGAAACA 60 CCTCAGCTAC AGATAATGAC TAATAATTTA ACACTAATGT ACCGTCAAAT GGTTACTAAT 5622 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCAGCTAC AGATAATGAC TAATAATTTA ACACTAATGT ACCGTCAAAT GGTTACTAAT 120 GCTCCTTGCC CGTCTCAATT CTTCGGTGCT GCTTACCCTC TGGGTTCTGA TCCAGAACCA 5562 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTCCTTGCC CGTCTCAATT CTTCGGTGCT GCTTACCCTC TGGGTTCTGA TCCAGAACCA 180 GGCATGGGTA CTATTGAGAA TATTCCTCAT ACACCGGTCC ATATCTGGAC CGGTGATAGT 5502 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCATGGGTA CTATTGAGAA TATTCCTCAT ACACCGGTCC ATATCTGGAC CGGTGATAGT 240 CCTAGACAAG GACACGGTGA AGACATGGGT AATTTCTATT CAGCTGGTTT AGACCCGCTT 5442 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTAGACAAG GACACGGTGA AGACATGGGT AATTTCTATT CAGCTGGTTT AGACCCGCTT 300 TTCTACTGTC ACCATGCTAA TGTGGACAGG ATGTGGAACG AGTGGAAATT AATTGGCGGG 5382 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTACTGTC ACCATGCTAA TGTGGACAGG ATGTGGAACG AGTGGAAATT AATTGGCGGG 360 AAAAGAAGGG ATTTATCAAA TAAAGATTGG TTGAACTCTG AATTCTTTTT CTACGATGAA 5322 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAGAAGGG ATTTATCAAA TAAAGATTGG TTGAACTCTG AATTCTTTTT CTACGATGAA 420 AATCGTAACC CTTACCGCGT GAAAGTCCGT GATTGTTTGG ATAGTAAAAA AATGGGATTC 5262 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATCGTAACC CTTACCGCGT GAAAGTCCGT GATTGTTTGG ATAGTAAAAA AATGGGATTC 480 GATTACGCGC CAATGCCCAC TCCATGGCGT AATTTCAAAC CAATCAGAAG GTCATCATCA 5202 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATTACGCGC CAATGCCCAC TCCATGGCGT AATTTCAAAC CAATCAGAAG GTCATCATCA 540 GGAAAAGTGA ATACAGCGTC AATTGCACCA GTTAGCAA 5164 |||||||||| |||||||||| |||||||||| |||||||| GGAAAAGTGA ATACAGCGTC AATTGCACCA GTTAGCAA 578 hqPGS_C08HBa0336I24.1-_SGN-E241903+ (5741 5164) ******************************************************************************** EST sequence 306 +strand 640 n (File: SGN-E322245+) 1 TCATCCAAAA GGTATGCGTA TACCTCCCAT GTTTGATCGT GAGGGTTCAT CTCTTTACGA 61 TGAGAAACGT AACCAAAATC ATCGCAATGG AACTATTATT GATCTTGGTC ATTTTGGTAA 121 GGACGTCGAA ACACCTCAGC TACAGATAAT GACTAATAAT TTAACACTAA TGTACCGTCA 181 AATGGTTACT AATGCTCCTT GCCCGTCTCA ATTCTTCGGT GCTGCTTACC CTCTGGGTTC 241 TGATCCAGAA CCAGGCATGG GTACTATTGA GAATATTCCT CATACACCGG TCCATATCTG 301 GACCGGTGAT AGTCCTAGAC AAGGACACGG TGAAGACATG GGTAATTTCT ATTCAGCTGG 361 TTTAGACCCG CTTTTCTACT GTCACCATGC TAATGTGGAC AGGATGTGGA ACGAGTGGAA 421 ATTAATTGGC GGGAAAAGAA GGGATTTATC AAATAAAGAT TGGTTGAACT CTGAATTCTT 481 TTTCTACGAT GAAAATCGTA ACCCTTACCG CGTGAAAGTC CGTGATTGTT TGGATAGTAA 541 AAAAATGGGA TTCGATTACG CGCCAATGCC CACTCCATGG CGTAATTTCA AACCAATCAG 601 AAGGTCATCA TCAGGAAAAG TGAATACAGC GTCAATTGCA Predicted gene structure (within gDNA segment 6414 to 4565): Exon 1 5814 5175 ( 640 n); cDNA 1 640 ( 640 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E322245+ 1.000 640 1.000 C PGS_C08HBa0336I24.1-_SGN-E322245+ (5814 5175) Alignment (genomic DNA sequence = upper lines): TCATCCAAAA GGTATGCGTA TACCTCCCAT GTTTGATCGT GAGGGTTCAT CTCTTTACGA 5755 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCATCCAAAA GGTATGCGTA TACCTCCCAT GTTTGATCGT GAGGGTTCAT CTCTTTACGA 60 TGAGAAACGT AACCAAAATC ATCGCAATGG AACTATTATT GATCTTGGTC ATTTTGGTAA 5695 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAGAAACGT AACCAAAATC ATCGCAATGG AACTATTATT GATCTTGGTC ATTTTGGTAA 120 GGACGTCGAA ACACCTCAGC TACAGATAAT GACTAATAAT TTAACACTAA TGTACCGTCA 5635 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGACGTCGAA ACACCTCAGC TACAGATAAT GACTAATAAT TTAACACTAA TGTACCGTCA 180 AATGGTTACT AATGCTCCTT GCCCGTCTCA ATTCTTCGGT GCTGCTTACC CTCTGGGTTC 5575 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGGTTACT AATGCTCCTT GCCCGTCTCA ATTCTTCGGT GCTGCTTACC CTCTGGGTTC 240 TGATCCAGAA CCAGGCATGG GTACTATTGA GAATATTCCT CATACACCGG TCCATATCTG 5515 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATCCAGAA CCAGGCATGG GTACTATTGA GAATATTCCT CATACACCGG TCCATATCTG 300 GACCGGTGAT AGTCCTAGAC AAGGACACGG TGAAGACATG GGTAATTTCT ATTCAGCTGG 5455 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCGGTGAT AGTCCTAGAC AAGGACACGG TGAAGACATG GGTAATTTCT ATTCAGCTGG 360 TTTAGACCCG CTTTTCTACT GTCACCATGC TAATGTGGAC AGGATGTGGA ACGAGTGGAA 5395 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTAGACCCG CTTTTCTACT GTCACCATGC TAATGTGGAC AGGATGTGGA ACGAGTGGAA 420 ATTAATTGGC GGGAAAAGAA GGGATTTATC AAATAAAGAT TGGTTGAACT CTGAATTCTT 5335 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAATTGGC GGGAAAAGAA GGGATTTATC AAATAAAGAT TGGTTGAACT CTGAATTCTT 480 TTTCTACGAT GAAAATCGTA ACCCTTACCG CGTGAAAGTC CGTGATTGTT TGGATAGTAA 5275 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCTACGAT GAAAATCGTA ACCCTTACCG CGTGAAAGTC CGTGATTGTT TGGATAGTAA 540 AAAAATGGGA TTCGATTACG CGCCAATGCC CACTCCATGG CGTAATTTCA AACCAATCAG 5215 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAATGGGA TTCGATTACG CGCCAATGCC CACTCCATGG CGTAATTTCA AACCAATCAG 600 AAGGTCATCA TCAGGAAAAG TGAATACAGC GTCAATTGCA 5175 |||||||||| |||||||||| |||||||||| |||||||||| AAGGTCATCA TCAGGAAAAG TGAATACAGC GTCAATTGCA 640 hqPGS_C08HBa0336I24.1-_SGN-E322245+ (5814 5175) ******************************************************************************** EST sequence 287 +strand 314 n (File: SGN-E290521+) 1 TGGACCGGTG ACAAACCTCG TCAAAAAAAC GGTGAAGACA TGGGTAATTT CTACTCAGCC 61 GGTTTAGATC CGATTTTTTA CTGCCACCAT GCCAATGTGG ACAGGATGTG GAATGAATGG 121 AAATTAATTG GCGGGAAAAG AAGGGATTTA ACAGATAAAG ATTGGTTGAA CTCTGAATTC 181 TTTTTCTACG ATGAAAATCG TAACCCTTAC CGTGTGAAAG TCCGTGACTG TTTGGACAGT 241 AAAAAAATGG GATTCGATTA CGCGCCAATG CCCACTCCAT GGCGTAATTT TAAACCAATC 301 AGAAAGTCAT CATC Predicted gene structure (within gDNA segment 7169 to 4377): Exon 1 5516 5203 ( 314 n); cDNA 1 314 ( 314 n); score: 0.924 MATCH C08HBa0336I24.1- SGN-E290521+ 0.924 314 1.000 C PGS_C08HBa0336I24.1-_SGN-E290521+ (5516 5203) Alignment (genomic DNA sequence = upper lines): TGGACCGGTG ATAGTCCTAG ACAAGGACAC GGTGAAGACA TGGGTAATTT CTATTCAGCT 5457 |||||||||| | | ||| | ||| | || |||||||||| |||||||||| ||| ||||| TGGACCGGTG ACAAACCTCG TCAAAAAAAC GGTGAAGACA TGGGTAATTT CTACTCAGCC 60 GGTTTAGACC CGCTTTTCTA CTGTCACCAT GCTAATGTGG ACAGGATGTG GAACGAGTGG 5397 |||||||| | || |||| || ||| |||||| || ||||||| |||||||||| ||| || ||| GGTTTAGATC CGATTTTTTA CTGCCACCAT GCCAATGTGG ACAGGATGTG GAATGAATGG 120 AAATTAATTG GCGGGAAAAG AAGGGATTTA TCAAATAAAG ATTGGTTGAA CTCTGAATTC 5337 |||||||||| |||||||||| |||||||||| || |||||| |||||||||| |||||||||| AAATTAATTG GCGGGAAAAG AAGGGATTTA ACAGATAAAG ATTGGTTGAA CTCTGAATTC 180 TTTTTCTACG ATGAAAATCG TAACCCTTAC CGCGTGAAAG TCCGTGATTG TTTGGATAGT 5277 |||||||||| |||||||||| |||||||||| || ||||||| ||||||| || |||||| ||| TTTTTCTACG ATGAAAATCG TAACCCTTAC CGTGTGAAAG TCCGTGACTG TTTGGACAGT 240 AAAAAAATGG GATTCGATTA CGCGCCAATG CCCACTCCAT GGCGTAATTT CAAACCAATC 5217 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| AAAAAAATGG GATTCGATTA CGCGCCAATG CCCACTCCAT GGCGTAATTT TAAACCAATC 300 AGAAGGTCAT CATC 5203 |||| ||||| |||| AGAAAGTCAT CATC 314 hqPGS_C08HBa0336I24.1-_SGN-E290521+ (5516 5203) ******************************************************************************** EST sequence 111 +strand 718 n (File: SGN-E326236+) 1 GCAAGTTCAT TTCTCGTGGC TTTTCTTTCC GTTCCATAGA TGGTACTTGT ACTTTTACGA 61 AAGGATATTG GGGTCACTTA TTAATGATCC AACTTTTGCT TTACCTTACT GGAATTGGGA 121 TCATCCAAAA GGTATGCGTA TACCTCCCAT GTTTGATCGT GAGGGTTCAT CTCTTTACGA 181 TGAGAAACGT AACCAAAATC ATCGCAATGG AACTATTATT GATCTTGGTC ATTTTGGTAA 241 GGACGTCGAA ACACCTCAGC TACAGATAAT GACTAATAAT TTAACACTAA TGTACCGTCA 301 AATGGTTACT AATGCTCCTT GCCCGTCTCA ATTCTTCGGT GCTGCTTACC CTCTGGGTTC 361 TGATCCAGAA CCAGGCATGG GTACTATTGA GAATATTCCT CATACACCGG TCCATATCTG 421 GACCGGTGAT AGTCCTAGAC AAGGACACGG TGAAGACATG GGTAATTTCT ATTCAGCTGG 481 TTTAGACCCG CTTTTCTACT GTCACCATGC TAATGTGGAC AGGATGTGGA ACGAGTGGAA 541 ATTAATTGGC GGGAAAAGAA GGGATTTATC AAATAAAGAT TGGTTGAACT CTGAATTCTT 601 TTTCTACGAT GAAAATCGTA ACCCTTACCC GCGTGAAGTC CGTGATTGTT TGGATAGTAA 661 AAAAATGGGA TTCGATTACG CGCCAATGCC CACTCCATGG CGTAATTTCA AACCAATC Predicted gene structure (within gDNA segment 6534 to 4607): Exon 1 5934 5217 ( 718 n); cDNA 1 718 ( 718 n); score: 0.995 MATCH C08HBa0336I24.1- SGN-E326236+ 0.995 718 1.000 C PGS_C08HBa0336I24.1-_SGN-E326236+ (5934 5217) Alignment (genomic DNA sequence = upper lines): GCAAGTTCAT TTCTCGTGGC TTTTCTTTCC GTTCCATAGA TGGTACTTGT ACTTTTACGA 5875 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAAGTTCAT TTCTCGTGGC TTTTCTTTCC GTTCCATAGA TGGTACTTGT ACTTTTACGA 60 AAGGATATTG GGGTCACTTA TTAATGATCC AACTTTTGCT TTACCTTACT GGAATTGGGA 5815 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGATATTG GGGTCACTTA TTAATGATCC AACTTTTGCT TTACCTTACT GGAATTGGGA 120 TCATCCAAAA GGTATGCGTA TACCTCCCAT GTTTGATCGT GAGGGTTCAT CTCTTTACGA 5755 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCATCCAAAA GGTATGCGTA TACCTCCCAT GTTTGATCGT GAGGGTTCAT CTCTTTACGA 180 TGAGAAACGT AACCAAAATC ATCGCAATGG AACTATTATT GATCTTGGTC ATTTTGGTAA 5695 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAGAAACGT AACCAAAATC ATCGCAATGG AACTATTATT GATCTTGGTC ATTTTGGTAA 240 GGACGTCGAA ACACCTCAGC TACAGATAAT GACTAATAAT TTAACACTAA TGTACCGTCA 5635 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGACGTCGAA ACACCTCAGC TACAGATAAT GACTAATAAT TTAACACTAA TGTACCGTCA 300 AATGGTTACT AATGCTCCTT GCCCGTCTCA ATTCTTCGGT GCTGCTTACC CTCTGGGTTC 5575 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGGTTACT AATGCTCCTT GCCCGTCTCA ATTCTTCGGT GCTGCTTACC CTCTGGGTTC 360 TGATCCAGAA CCAGGCATGG GTACTATTGA GAATATTCCT CATACACCGG TCCATATCTG 5515 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATCCAGAA CCAGGCATGG GTACTATTGA GAATATTCCT CATACACCGG TCCATATCTG 420 GACCGGTGAT AGTCCTAGAC AAGGACACGG TGAAGACATG GGTAATTTCT ATTCAGCTGG 5455 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCGGTGAT AGTCCTAGAC AAGGACACGG TGAAGACATG GGTAATTTCT ATTCAGCTGG 480 TTTAGACCCG CTTTTCTACT GTCACCATGC TAATGTGGAC AGGATGTGGA ACGAGTGGAA 5395 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTAGACCCG CTTTTCTACT GTCACCATGC TAATGTGGAC AGGATGTGGA ACGAGTGGAA 540 ATTAATTGGC GGGAAAAGAA GGGATTTATC AAATAAAGAT TGGTTGAACT CTGAATTCTT 5335 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAATTGGC GGGAAAAGAA GGGATTTATC AAATAAAGAT TGGTTGAACT CTGAATTCTT 600 TTTCTACGAT GAAAATCGTA ACCCTTA-CC GCGTGAAAGT CCGTGATTGT TTGGATAGTA 5276 |||||||||| |||||||||| ||||||| || ||||| |||| |||||||||| |||||||||| TTTCTACGAT GAAAATCGTA ACCCTTACCC GCGTG-AAGT CCGTGATTGT TTGGATAGTA 659 AAAAAATGGG ATTCGATTAC GCGCCAATGC CCACTCCATG GCGTAATTTC AAACCAATC 5217 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| AAAAAATGGG ATTCGATTAC GCGCCAATGC CCACTCCATG GCGTAATTTC AAACCAATC 718 hqPGS_C08HBa0336I24.1-_SGN-E326236+ (5934 5217) ******************************************************************************** EST sequence 320 +strand 749 n (File: SGN-E334025+) 1 ACAAGCTAAT ATTCATTGTG CTTATTGTAA CGGTGCTTAT AAAATTGGTG GTAAAGAATT 61 GCAAGTTCAT TTCTCGTGGC TTTTCTTTCC GTTCCATAGA TGGTACTTGT ACTTTTACGA 121 AAGGATATTG GGGTCACTTA TTAATGATCC AACTTTTGCT TTACCTTACT GGAATTGGGA 181 TCATCCAAAA GGTATGCGTA TACCTCCCAT GTTTGATCGT GAGGGTTCAT CTCTTTACGA 241 TGAGAAACGT AACCAAAATC ATCGCAATGG AACTATTATT GATCTTGGTC ATTTTGGTAA 301 GGACGTCGAA ACACCTCAGC TACAGATAAT GACTAATAAT TTAACACTAA TGTACCGTCA 361 AATGGTTACT AATGCTCCTT GCCCGTCTCA ATTCTTCGGT GCTGCTTACC CTCTGGGTTC 421 TGATCCAGAA CCAGGCATGG GTACTATTGA GAATATTCCT CATACACCGG TCCATATCTG 481 GACCGGTGAT AGTCCTAGAC AAGGACACGG TGAAGACATG GGTAATTTCT ATTCAGCTGG 541 TTTAGACCCG CTTTTCTACT GTCACCATGC TAATGTGGAC AGGATGTGGA ACGAGTGGAA 601 ATTAATTGGC GGGAAAAGAA GGGATTTATC AAATAAAGAT TGGTTGAACT CTGAATTCTT 661 TTTCTACGAT GAAAATCGTA ACCCTTACCG CGTGAAAGTC CGTGATTGTT TGGATAGTAA 721 AAAATGGGAT TCGATTACGC GCCAATGCC Predicted gene structure (within gDNA segment 6594 to 4635): Exon 1 5994 5245 ( 750 n); cDNA 1 749 ( 749 n); score: 0.999 MATCH C08HBa0336I24.1- SGN-E334025+ 0.999 750 1.001 C PGS_C08HBa0336I24.1-_SGN-E334025+ (5994 5245) Alignment (genomic DNA sequence = upper lines): ACAAGCTAAT ATTCATTGTG CTTATTGTAA CGGTGCTTAT AAAATTGGTG GTAAAGAATT 5935 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAGCTAAT ATTCATTGTG CTTATTGTAA CGGTGCTTAT AAAATTGGTG GTAAAGAATT 60 GCAAGTTCAT TTCTCGTGGC TTTTCTTTCC GTTCCATAGA TGGTACTTGT ACTTTTACGA 5875 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAAGTTCAT TTCTCGTGGC TTTTCTTTCC GTTCCATAGA TGGTACTTGT ACTTTTACGA 120 AAGGATATTG GGGTCACTTA TTAATGATCC AACTTTTGCT TTACCTTACT GGAATTGGGA 5815 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGATATTG GGGTCACTTA TTAATGATCC AACTTTTGCT TTACCTTACT GGAATTGGGA 180 TCATCCAAAA GGTATGCGTA TACCTCCCAT GTTTGATCGT GAGGGTTCAT CTCTTTACGA 5755 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCATCCAAAA GGTATGCGTA TACCTCCCAT GTTTGATCGT GAGGGTTCAT CTCTTTACGA 240 TGAGAAACGT AACCAAAATC ATCGCAATGG AACTATTATT GATCTTGGTC ATTTTGGTAA 5695 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAGAAACGT AACCAAAATC ATCGCAATGG AACTATTATT GATCTTGGTC ATTTTGGTAA 300 GGACGTCGAA ACACCTCAGC TACAGATAAT GACTAATAAT TTAACACTAA TGTACCGTCA 5635 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGACGTCGAA ACACCTCAGC TACAGATAAT GACTAATAAT TTAACACTAA TGTACCGTCA 360 AATGGTTACT AATGCTCCTT GCCCGTCTCA ATTCTTCGGT GCTGCTTACC CTCTGGGTTC 5575 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGGTTACT AATGCTCCTT GCCCGTCTCA ATTCTTCGGT GCTGCTTACC CTCTGGGTTC 420 TGATCCAGAA CCAGGCATGG GTACTATTGA GAATATTCCT CATACACCGG TCCATATCTG 5515 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATCCAGAA CCAGGCATGG GTACTATTGA GAATATTCCT CATACACCGG TCCATATCTG 480 GACCGGTGAT AGTCCTAGAC AAGGACACGG TGAAGACATG GGTAATTTCT ATTCAGCTGG 5455 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCGGTGAT AGTCCTAGAC AAGGACACGG TGAAGACATG GGTAATTTCT ATTCAGCTGG 540 TTTAGACCCG CTTTTCTACT GTCACCATGC TAATGTGGAC AGGATGTGGA ACGAGTGGAA 5395 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTAGACCCG CTTTTCTACT GTCACCATGC TAATGTGGAC AGGATGTGGA ACGAGTGGAA 600 ATTAATTGGC GGGAAAAGAA GGGATTTATC AAATAAAGAT TGGTTGAACT CTGAATTCTT 5335 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAATTGGC GGGAAAAGAA GGGATTTATC AAATAAAGAT TGGTTGAACT CTGAATTCTT 660 TTTCTACGAT GAAAATCGTA ACCCTTACCG CGTGAAAGTC CGTGATTGTT TGGATAGTAA 5275 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | TTTCTACGAT GAAAATCGTA ACCCTTACCG CGTGAAAGTC CGTGATTGTT TGGATAGT-A 719 AAAAATGGGA TTCGATTACG CGCCAATGCC 5245 |||||||||| |||||||||| |||||||||| AAAAATGGGA TTCGATTACG CGCCAATGCC 749 hqPGS_C08HBa0336I24.1-_SGN-E334025+ (5994 5245) ******************************************************************************** EST sequence 129 +strand 482 n (File: SGN-E243580+) 1 CAAAATCATC GCAATGGAAC TATTATTGAT CTTGGTCATT TTGGTAAGGA CGTCGAAACA 61 CCTCAGCTAC AGATAATGAC TAATAATTTA ACACTAATGT ACCGTCAAAT GGTTACTAAT 121 GCTCCTTGCC CGTCTCAATT CTTCGGTGCT GCTTACCCTC TGGGTTCTGA TCCAGAACCA 181 GGCATGGGTA CTATTGAGAA TATTCCTCAT ACACCGGTCC ATATCTGGAC CGGTGATAGT 241 CCTAGACAAG GACACGGTGA AGACATGGGT AATTTCTATT CAGCTGGTTT AGACCCGCTT 301 TTCTACTGTC ACCATGCTAA TGTGGACAGG ATGTGGAACG AGTGGAAATT AATTGGCGGG 361 AAAAGAAGGC ATTNATCAAA TAAAGATTGG TTGAACTCTG AATTCTTTTT CTACGATGAA 421 AATCGTAACC CTTACCGCGT GAAAGTCCGC GATTGTTTGG ATAGTAAAAA AAATGGGATT 481 TG Predicted gene structure (within gDNA segment 6341 to 4560): Exon 1 5741 5263 ( 479 n); cDNA 1 480 ( 480 n); score: 0.989 MATCH C08HBa0336I24.1- SGN-E243580+ 0.989 479 0.994 C PGS_C08HBa0336I24.1-_SGN-E243580+ (5741 5263) Alignment (genomic DNA sequence = upper lines): CAAAATCATC GCAATGGAAC TATTATTGAT CTTGGTCATT TTGGTAAGGA CGTCGAAACA 5682 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAATCATC GCAATGGAAC TATTATTGAT CTTGGTCATT TTGGTAAGGA CGTCGAAACA 60 CCTCAGCTAC AGATAATGAC TAATAATTTA ACACTAATGT ACCGTCAAAT GGTTACTAAT 5622 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCAGCTAC AGATAATGAC TAATAATTTA ACACTAATGT ACCGTCAAAT GGTTACTAAT 120 GCTCCTTGCC CGTCTCAATT CTTCGGTGCT GCTTACCCTC TGGGTTCTGA TCCAGAACCA 5562 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTCCTTGCC CGTCTCAATT CTTCGGTGCT GCTTACCCTC TGGGTTCTGA TCCAGAACCA 180 GGCATGGGTA CTATTGAGAA TATTCCTCAT ACACCGGTCC ATATCTGGAC CGGTGATAGT 5502 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCATGGGTA CTATTGAGAA TATTCCTCAT ACACCGGTCC ATATCTGGAC CGGTGATAGT 240 CCTAGACAAG GACACGGTGA AGACATGGGT AATTTCTATT CAGCTGGTTT AGACCCGCTT 5442 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTAGACAAG GACACGGTGA AGACATGGGT AATTTCTATT CAGCTGGTTT AGACCCGCTT 300 TTCTACTGTC ACCATGCTAA TGTGGACAGG ATGTGGAACG AGTGGAAATT AATTGGCGGG 5382 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTACTGTC ACCATGCTAA TGTGGACAGG ATGTGGAACG AGTGGAAATT AATTGGCGGG 360 AAAAGAAGGG ATTTATCAAA TAAAGATTGG TTGAACTCTG AATTCTTTTT CTACGATGAA 5322 ||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAGAAGGC ATTNATCAAA TAAAGATTGG TTGAACTCTG AATTCTTTTT CTACGATGAA 420 AATCGTAACC CTTACCGCGT GAAAGTCCGT GATTGTTTGG ATAGT-AAAA AAATGGGATT 5263 |||||||||| |||||||||| ||||||||| |||||||||| ||||| |||| |||||||||| AATCGTAACC CTTACCGCGT GAAAGTCCGC GATTGTTTGG ATAGTAAAAA AAATGGGATT 480 hqPGS_C08HBa0336I24.1-_SGN-E243580+ (5741 5263) ******************************************************************************** EST sequence 336 +strand 573 n (File: SGN-E313577+) 1 TTTTACGAAA GGATATTGGG GTCACTTATT AATGATCCAA CTTTTGCTTT ACCTTACTGG 61 AATTGGGATC ATCCAAAAGG TATGCGTATA CCTCCCATGT TTGATCGTGA GGGTTCATCT 121 CTTTACGATG AGAAACGTAA CCAAAATCAT CGCAATGGAA CTATTATTGA TCTTGGTCAT 181 TTTGGTAAGG ACGTCGAAAC ACCTCAGCTA CAGATAATGA CTAATAATTT AACACTAATG 241 TACCGTCAAA TGGTTACTAA TGCTCCTTGC CCGTCTCAAT TCTTCGGTGC TGCTTACCCT 301 CTGGGTTCTG ATCCAGAACC AGGCATGGGT ACTATTGAGA ATATTCCTCA TACACCGGTC 361 CATATCTGGA CCGGTGATAG TCCTAGACAA GGACACGGTG AAGACATGGG TAATTTCTAT 421 TCAGCTGGTT TAGACCCGCT TTTCTACTGT CACCATGCTA ATGTGGACAG GATGTGGAAC 481 GAGTGGAAAT TAATTGGCGG GAAAAGAAGG GATTTATCAA ATAAAGATTG GTTGAACTCT 541 GAATTCTTTT TCTACGATGA AAATCGTAAC CCT Predicted gene structure (within gDNA segment 6482 to 4700): Exon 1 5882 5310 ( 573 n); cDNA 1 573 ( 573 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E313577+ 1.000 573 1.000 C PGS_C08HBa0336I24.1-_SGN-E313577+ (5882 5310) Alignment (genomic DNA sequence = upper lines): TTTTACGAAA GGATATTGGG GTCACTTATT AATGATCCAA CTTTTGCTTT ACCTTACTGG 5823 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTACGAAA GGATATTGGG GTCACTTATT AATGATCCAA CTTTTGCTTT ACCTTACTGG 60 AATTGGGATC ATCCAAAAGG TATGCGTATA CCTCCCATGT TTGATCGTGA GGGTTCATCT 5763 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTGGGATC ATCCAAAAGG TATGCGTATA CCTCCCATGT TTGATCGTGA GGGTTCATCT 120 CTTTACGATG AGAAACGTAA CCAAAATCAT CGCAATGGAA CTATTATTGA TCTTGGTCAT 5703 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTACGATG AGAAACGTAA CCAAAATCAT CGCAATGGAA CTATTATTGA TCTTGGTCAT 180 TTTGGTAAGG ACGTCGAAAC ACCTCAGCTA CAGATAATGA CTAATAATTT AACACTAATG 5643 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGGTAAGG ACGTCGAAAC ACCTCAGCTA CAGATAATGA CTAATAATTT AACACTAATG 240 TACCGTCAAA TGGTTACTAA TGCTCCTTGC CCGTCTCAAT TCTTCGGTGC TGCTTACCCT 5583 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACCGTCAAA TGGTTACTAA TGCTCCTTGC CCGTCTCAAT TCTTCGGTGC TGCTTACCCT 300 CTGGGTTCTG ATCCAGAACC AGGCATGGGT ACTATTGAGA ATATTCCTCA TACACCGGTC 5523 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGGGTTCTG ATCCAGAACC AGGCATGGGT ACTATTGAGA ATATTCCTCA TACACCGGTC 360 CATATCTGGA CCGGTGATAG TCCTAGACAA GGACACGGTG AAGACATGGG TAATTTCTAT 5463 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATATCTGGA CCGGTGATAG TCCTAGACAA GGACACGGTG AAGACATGGG TAATTTCTAT 420 TCAGCTGGTT TAGACCCGCT TTTCTACTGT CACCATGCTA ATGTGGACAG GATGTGGAAC 5403 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAGCTGGTT TAGACCCGCT TTTCTACTGT CACCATGCTA ATGTGGACAG GATGTGGAAC 480 GAGTGGAAAT TAATTGGCGG GAAAAGAAGG GATTTATCAA ATAAAGATTG GTTGAACTCT 5343 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGTGGAAAT TAATTGGCGG GAAAAGAAGG GATTTATCAA ATAAAGATTG GTTGAACTCT 540 GAATTCTTTT TCTACGATGA AAATCGTAAC CCT 5310 |||||||||| |||||||||| |||||||||| ||| GAATTCTTTT TCTACGATGA AAATCGTAAC CCT 573 hqPGS_C08HBa0336I24.1-_SGN-E313577+ (5882 5310) ******************************************************************************** EST sequence 89 +strand 701 n (File: SGN-E314781+) 1 CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA TGATAAAGGT ACTGAAGTCT 61 CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG CGTTCCGTAC TACAAGTTCC 121 CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC GGCGGATGAG GAGTACGTAG 181 CCAAGTATCA ATTGGCTACA AGTCGAATGA GGGAACTTGA TAAAGACCCT TTTGACCCTC 241 TTGGGTTTAA ACAACAAGCT AATATTCATT GTGCTTATTG TAACGGTGCT TATAAAATTG 301 GTGGTAAAGA ATTGCAAGTT CATTTCTCGT GGCTTTTCTT TCCGTTCCAT AGATGGTACT 361 TGTACTTTTA CGAAAGGATA TTGGGGTCAC TTATTAATGA TCCAACTTTT GCTTTACCTT 421 ACTGGAATTG GGATCATCCA AAAGGTATGC GTATACCTCC CATGTTTGAT CGTGAGGGTT 481 CATCTCTTTA CGATGAGAAA CGTAACCAAA ATCATCGCAA TGGAACTATT ATTGATCTTG 541 GTCATTTTGG TAAGGACGTC GAAACACCTC AGCTACAGAT AATGACTAAT AATTTAACAC 601 TAATGTACCG TCAAATGGTT ACTAATGCTC CTTGCCCGTC TCAATTCTTC GGTGCTGCTT 661 ACCCTCTGGG TTCTGATCCA GAACAGGCAT GGGTACTATT G Predicted gene structure (within gDNA segment 6847 to 4936): Exon 1 6247 5546 ( 702 n); cDNA 1 701 ( 701 n); score: 0.999 MATCH C08HBa0336I24.1- SGN-E314781+ 0.999 702 1.001 C PGS_C08HBa0336I24.1-_SGN-E314781+ (6247 5546) Alignment (genomic DNA sequence = upper lines): CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA TGATAAAGGT ACTGAAGTCT 6188 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA TGATAAAGGT ACTGAAGTCT 60 CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG CGTTCCGTAC TACAAGTTCC 6128 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG CGTTCCGTAC TACAAGTTCC 120 CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC GGCGGATGAG GAGTACGTAG 6068 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC GGCGGATGAG GAGTACGTAG 180 CCAAGTATCA ATTGGCTACA AGTCGAATGA GGGAACTTGA TAAAGACCCT TTTGACCCTC 6008 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAAGTATCA ATTGGCTACA AGTCGAATGA GGGAACTTGA TAAAGACCCT TTTGACCCTC 240 TTGGGTTTAA ACAACAAGCT AATATTCATT GTGCTTATTG TAACGGTGCT TATAAAATTG 5948 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGGTTTAA ACAACAAGCT AATATTCATT GTGCTTATTG TAACGGTGCT TATAAAATTG 300 GTGGTAAAGA ATTGCAAGTT CATTTCTCGT GGCTTTTCTT TCCGTTCCAT AGATGGTACT 5888 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGGTAAAGA ATTGCAAGTT CATTTCTCGT GGCTTTTCTT TCCGTTCCAT AGATGGTACT 360 TGTACTTTTA CGAAAGGATA TTGGGGTCAC TTATTAATGA TCCAACTTTT GCTTTACCTT 5828 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTACTTTTA CGAAAGGATA TTGGGGTCAC TTATTAATGA TCCAACTTTT GCTTTACCTT 420 ACTGGAATTG GGATCATCCA AAAGGTATGC GTATACCTCC CATGTTTGAT CGTGAGGGTT 5768 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTGGAATTG GGATCATCCA AAAGGTATGC GTATACCTCC CATGTTTGAT CGTGAGGGTT 480 CATCTCTTTA CGATGAGAAA CGTAACCAAA ATCATCGCAA TGGAACTATT ATTGATCTTG 5708 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCTCTTTA CGATGAGAAA CGTAACCAAA ATCATCGCAA TGGAACTATT ATTGATCTTG 540 GTCATTTTGG TAAGGACGTC GAAACACCTC AGCTACAGAT AATGACTAAT AATTTAACAC 5648 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCATTTTGG TAAGGACGTC GAAACACCTC AGCTACAGAT AATGACTAAT AATTTAACAC 600 TAATGTACCG TCAAATGGTT ACTAATGCTC CTTGCCCGTC TCAATTCTTC GGTGCTGCTT 5588 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATGTACCG TCAAATGGTT ACTAATGCTC CTTGCCCGTC TCAATTCTTC GGTGCTGCTT 660 ACCCTCTGGG TTCTGATCCA GAACCAGGCA TGGGTACTAT TG 5546 |||||||||| |||||||||| ||| |||||| |||||||||| || ACCCTCTGGG TTCTGATCCA GAA-CAGGCA TGGGTACTAT TG 701 hqPGS_C08HBa0336I24.1-_SGN-E314781+ (6247 5546) ******************************************************************************** EST sequence 322 +strand 711 n (File: SGN-E340679+) 1 GCTGCTCCTA TACCACCACC TGATCTCAAA TCTTGTGGTG TTGCCCATAT AGATGATAAA 61 GGTACTGAAG TCTCATACAG TTGTTGCCCT CCTGTACCTG ATGATATCGA TAGCGTTCCG 121 TACTACAAGT TCCCTCCTAT GACGAAACTC CGCATCCGCC CCCCTGCTCA TGCGGCGGAT 181 GAGGAGTACG TAGCCAAGTA TCAATTGGCT ACAAGTCGAA TGAGGGAACT TGATAAAGAC 241 CCTTTTGACC CTCTTGGGTT TAAACAACAA GCTAATATTC ATTGTGCTTA TTGTAACGGT 301 GCTTATAAAA TTGGTGGTAA AGAATTGCAA GTTCATTTCT CGTGGCTTTT CTTTCCGTTC 361 CATAGATGGT ACTTGTACTT TTACGAAAGG ATATTGGGGT CACTTATTAA TGATCCAACT 421 TTTGCTTTAC CTTACTGGAA TTGGGATCAT CCAAAAGGTA TGCGTATACC TCCCATGTTT 481 GATCGTGAGG GTTCATCTCT TTACGATGAG AAACGTAACC AAAATCATCG CAATGGAACT 541 ATTATTGATC TTGGTCATTT TGGTAAGGAC GTCGAAACAC CTCAGCTACA GATAATGACT 601 AATAATTTAA CACTAATGTA CCGTCAAATG GTTACTAATG CTCCTTGCCC GTCTCAATTC 661 TTCGGTGCTG CTTACCCTCT GGGGTTCTGA TCCAGAACCA GGCATGGGTA C Predicted gene structure (within gDNA segment 6860 to 4941): Exon 1 6260 5551 ( 710 n); cDNA 1 711 ( 711 n); score: 0.996 MATCH C08HBa0336I24.1- SGN-E340679+ 0.996 710 0.999 C PGS_C08HBa0336I24.1-_SGN-E340679+ (6260 5551) Alignment (genomic DNA sequence = upper lines): GCTGCTCCTA TACCACCACC TGATCTCAAA TCTTGTGGTG TTGCCCATAT AGATGATAAA 6201 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTGCTCCTA TACCACCACC TGATCTCAAA TCTTGTGGTG TTGCCCATAT AGATGATAAA 60 GGTACTGAAG TCTCATACAG TTGTTGCCCT CCTGTACCTG ATGATATCGA TAGCGTTCCG 6141 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTACTGAAG TCTCATACAG TTGTTGCCCT CCTGTACCTG ATGATATCGA TAGCGTTCCG 120 TACTACAAGT TCCCTCCTAT GACGAAACTC CGCATCCGCC CCCCTGCTCA TGCGGCGGAT 6081 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACTACAAGT TCCCTCCTAT GACGAAACTC CGCATCCGCC CCCCTGCTCA TGCGGCGGAT 180 GAGGAGTACG TAGCCAAGTA TCAATTGGCT ACAAGTCGAA TGAGGGAACT TGATAAAGAC 6021 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGGAGTACG TAGCCAAGTA TCAATTGGCT ACAAGTCGAA TGAGGGAACT TGATAAAGAC 240 CCTTTTGACC CTCTTGGGTT TAAACAACAA GCTAATATTC ATTGTGCTTA TTGTAACGGT 5961 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTTTGACC CTCTTGGGTT TAAACAACAA GCTAATATTC ATTGTGCTTA TTGTAACGGT 300 GCTTATAAAA TTGGTGGTAA AGAATTGCAA GTTCATTTCT CGTGGCTTTT CTTTCCGTTC 5901 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTTATAAAA TTGGTGGTAA AGAATTGCAA GTTCATTTCT CGTGGCTTTT CTTTCCGTTC 360 CATAGATGGT ACTTGTACTT TTACGAAAGG ATATTGGGGT CACTTATTAA TGATCCAACT 5841 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATAGATGGT ACTTGTACTT TTACGAAAGG ATATTGGGGT CACTTATTAA TGATCCAACT 420 TTTGCTTTAC CTTACTGGAA TTGGGATCAT CCAAAAGGTA TGCGTATACC TCCCATGTTT 5781 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGCTTTAC CTTACTGGAA TTGGGATCAT CCAAAAGGTA TGCGTATACC TCCCATGTTT 480 GATCGTGAGG GTTCATCTCT TTACGATGAG AAACGTAACC AAAATCATCG CAATGGAACT 5721 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATCGTGAGG GTTCATCTCT TTACGATGAG AAACGTAACC AAAATCATCG CAATGGAACT 540 ATTATTGATC TTGGTCATTT TGGTAAGGAC GTCGAAACAC CTCAGCTACA GATAATGACT 5661 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTATTGATC TTGGTCATTT TGGTAAGGAC GTCGAAACAC CTCAGCTACA GATAATGACT 600 AATAATTTAA CACTAATGTA CCGTCAAATG GTTACTAATG CTCCTTGCCC GTCTCAATTC 5601 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATAATTTAA CACTAATGTA CCGTCAAATG GTTACTAATG CTCCTTGCCC GTCTCAATTC 660 TTCGGTGCTG CTTACCCTCT -GGGTTCTGA TCCAGAACCA GGCATGGGTA C 5551 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| | TTCGGTGCTG CTTACCCTCT GGGGTTCTGA TCCAGAACCA GGCATGGGTA C 711 hqPGS_C08HBa0336I24.1-_SGN-E340679+ (6260 5551) ******************************************************************************** EST sequence 309 +strand 539 n (File: SGN-E321823+) 1 TCATGCGGCG GATGAGGAGT ACGTAGCCAA GTATCAATTG GCTACAAGTC GAATGAGGGA 61 ACTTGATAAA GACCCTTTTG ACCCTCTTGG GTTTAAACAA CAAGCTAATA TTCATTGTGC 121 TTATTGTAAC GGTGCTTATA AAATTGGTGG TAAAGAATTG CAAGTTCATT TCTCGTGGCT 181 TTTCTTTCCG TTCCATAGAT GGTACTTGTA CTTTTACGAA AGGATATTGG GGTCACTTAT 241 TAATGATCCA ACTTTTGCTT TACCTTACTG GAATTGGGAT CATCCAAAAG GTATGCGTAT 301 ACCTCCCATG TTTGATCGTG AGGGTTCATC TCTTTACGAT GAGAAACGTA ACCAAAATCA 361 TCGCAATGGA ACTATTATTG ATCTTGGTCA TTTTGGTAAG GACGTCGAAA CACCTCAGCT 421 ACAGATAATG ACTAATAATT TAACACTAAT GTACCGTCAA ATGGTTACTA ATGCTCCTTG 481 CCCGTCTCAA TTCTTCCGTG CTGCTTACCC TCTGGGTTCT GATCCAGAAC CAGGCATGG Predicted gene structure (within gDNA segment 6693 to 4945): Exon 1 6093 5555 ( 539 n); cDNA 1 539 ( 539 n); score: 0.998 MATCH C08HBa0336I24.1- SGN-E321823+ 0.998 539 1.000 C PGS_C08HBa0336I24.1-_SGN-E321823+ (6093 5555) Alignment (genomic DNA sequence = upper lines): TCATGCGGCG GATGAGGAGT ACGTAGCCAA GTATCAATTG GCTACAAGTC GAATGAGGGA 6034 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCATGCGGCG GATGAGGAGT ACGTAGCCAA GTATCAATTG GCTACAAGTC GAATGAGGGA 60 ACTTGATAAA GACCCTTTTG ACCCTCTTGG GTTTAAACAA CAAGCTAATA TTCATTGTGC 5974 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTGATAAA GACCCTTTTG ACCCTCTTGG GTTTAAACAA CAAGCTAATA TTCATTGTGC 120 TTATTGTAAC GGTGCTTATA AAATTGGTGG TAAAGAATTG CAAGTTCATT TCTCGTGGCT 5914 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTATTGTAAC GGTGCTTATA AAATTGGTGG TAAAGAATTG CAAGTTCATT TCTCGTGGCT 180 TTTCTTTCCG TTCCATAGAT GGTACTTGTA CTTTTACGAA AGGATATTGG GGTCACTTAT 5854 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCTTTCCG TTCCATAGAT GGTACTTGTA CTTTTACGAA AGGATATTGG GGTCACTTAT 240 TAATGATCCA ACTTTTGCTT TACCTTACTG GAATTGGGAT CATCCAAAAG GTATGCGTAT 5794 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATGATCCA ACTTTTGCTT TACCTTACTG GAATTGGGAT CATCCAAAAG GTATGCGTAT 300 ACCTCCCATG TTTGATCGTG AGGGTTCATC TCTTTACGAT GAGAAACGTA ACCAAAATCA 5734 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTCCCATG TTTGATCGTG AGGGTTCATC TCTTTACGAT GAGAAACGTA ACCAAAATCA 360 TCGCAATGGA ACTATTATTG ATCTTGGTCA TTTTGGTAAG GACGTCGAAA CACCTCAGCT 5674 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGCAATGGA ACTATTATTG ATCTTGGTCA TTTTGGTAAG GACGTCGAAA CACCTCAGCT 420 ACAGATAATG ACTAATAATT TAACACTAAT GTACCGTCAA ATGGTTACTA ATGCTCCTTG 5614 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAGATAATG ACTAATAATT TAACACTAAT GTACCGTCAA ATGGTTACTA ATGCTCCTTG 480 CCCGTCTCAA TTCTTCGGTG CTGCTTACCC TCTGGGTTCT GATCCAGAAC CAGGCATGG 5555 |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| ||||||||| CCCGTCTCAA TTCTTCCGTG CTGCTTACCC TCTGGGTTCT GATCCAGAAC CAGGCATGG 539 hqPGS_C08HBa0336I24.1-_SGN-E321823+ (6093 5555) ******************************************************************************** EST sequence 115 +strand 750 n (File: SGN-E314333+) 1 AGGAGAAATG TTCTTTTAGG GTTAGGAGGT TTTTATGGTG CAGCTAATCT TGCACCATTA 61 GCCTCTGCTG CTCCTATACC ACCACCTGAT CTCAAATCTT GTGGTGTTGC CCATATAGAT 121 GATAAAGGTA CTGAAGTCTC ATACAGTTGT TGCCCTCCTG TACCTGATGA TATCGATAGC 181 GTTCCGTACT ACAAGTTCCC TCCTATGACG AAACTCCGCA TCCGCCCCCC TGCTCATGCG 241 GCGGATGAGG AGTACGTAGC CAAGTATCAA TTGGCTACAA GTCGAATGAG GGAACTTGAT 301 AAAGACCCTT TTGACCCTCT TGGGTTTAAA CAACAAGCTA ATATTCATTG TGCTTATTGT 361 AACGGTGCTT ATAAAATTGG TGGTAAAGAA TTGCAAGTTC ATTTCTCGTG GCTTTTCTTT 421 CCGTTCCATA GATGGTACTT GTACTTTTAC GAAAGGATAT TGGGGTCACT TATTAATGAT 481 CCAACTTTTG CTTTACCTTA CTGGAATTGG GATCATCCAA AAGGTATGCG TATACCTCCC 541 ATGTTTGATC GTGAGGGTTC ATCTCTTTAC GATGAGAAAC GTAACCAAAA TCATCGCAAT 601 GGAACTATTA TTGATCTTGG TCATTTTGGT AAGGACGTCG AAACACCTCA GCTACAGATA 661 ATGACTAATA AATTTACACT AATGTACCCG TCAATGGTTA CTAATGCTCC TTGCCCCGTC 721 TCATTCTTCG GTGCTGCTTA CCCCTCTGGG Predicted gene structure (within gDNA segment 6926 to 4904): Exon 1 6326 5578 ( 749 n); cDNA 1 750 ( 750 n); score: 0.984 MATCH C08HBa0336I24.1- SGN-E314333+ 0.984 749 0.999 C PGS_C08HBa0336I24.1-_SGN-E314333+ (6326 5578) Alignment (genomic DNA sequence = upper lines): AGGAGAAATG TTCTTTTAGG GTTAGGAGGT TTTTATGGTG CAGCTAATCT TGCACCATTA 6267 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGAGAAATG TTCTTTTAGG GTTAGGAGGT TTTTATGGTG CAGCTAATCT TGCACCATTA 60 GCCTCTGCTG CTCCTATACC ACCACCTGAT CTCAAATCTT GTGGTGTTGC CCATATAGAT 6207 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCTCTGCTG CTCCTATACC ACCACCTGAT CTCAAATCTT GTGGTGTTGC CCATATAGAT 120 GATAAAGGTA CTGAAGTCTC ATACAGTTGT TGCCCTCCTG TACCTGATGA TATCGATAGC 6147 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAAAGGTA CTGAAGTCTC ATACAGTTGT TGCCCTCCTG TACCTGATGA TATCGATAGC 180 GTTCCGTACT ACAAGTTCCC TCCTATGACG AAACTCCGCA TCCGCCCCCC TGCTCATGCG 6087 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTCCGTACT ACAAGTTCCC TCCTATGACG AAACTCCGCA TCCGCCCCCC TGCTCATGCG 240 GCGGATGAGG AGTACGTAGC CAAGTATCAA TTGGCTACAA GTCGAATGAG GGAACTTGAT 6027 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGGATGAGG AGTACGTAGC CAAGTATCAA TTGGCTACAA GTCGAATGAG GGAACTTGAT 300 AAAGACCCTT TTGACCCTCT TGGGTTTAAA CAACAAGCTA ATATTCATTG TGCTTATTGT 5967 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGACCCTT TTGACCCTCT TGGGTTTAAA CAACAAGCTA ATATTCATTG TGCTTATTGT 360 AACGGTGCTT ATAAAATTGG TGGTAAAGAA TTGCAAGTTC ATTTCTCGTG GCTTTTCTTT 5907 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACGGTGCTT ATAAAATTGG TGGTAAAGAA TTGCAAGTTC ATTTCTCGTG GCTTTTCTTT 420 CCGTTCCATA GATGGTACTT GTACTTTTAC GAAAGGATAT TGGGGTCACT TATTAATGAT 5847 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGTTCCATA GATGGTACTT GTACTTTTAC GAAAGGATAT TGGGGTCACT TATTAATGAT 480 CCAACTTTTG CTTTACCTTA CTGGAATTGG GATCATCCAA AAGGTATGCG TATACCTCCC 5787 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAACTTTTG CTTTACCTTA CTGGAATTGG GATCATCCAA AAGGTATGCG TATACCTCCC 540 ATGTTTGATC GTGAGGGTTC ATCTCTTTAC GATGAGAAAC GTAACCAAAA TCATCGCAAT 5727 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGTTTGATC GTGAGGGTTC ATCTCTTTAC GATGAGAAAC GTAACCAAAA TCATCGCAAT 600 GGAACTATTA TTGATCTTGG TCATTTTGGT AAGGACGTCG AAACACCTCA GCTACAGATA 5667 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAACTATTA TTGATCTTGG TCATTTTGGT AAGGACGTCG AAACACCTCA GCTACAGATA 660 ATGACTAATA ATTTAACACT AATGTACCGT CAAATGGTTA CTAATGCTCC TTG-CCCGTC 5608 |||||||||| | || ||||| |||||||| |||||||| |||||||||| ||| |||||| ATGACTAATA AATTTACACT AATGTACCCG TCAATGGTTA CTAATGCTCC TTGCCCCGTC 720 TCAATTCTTC GGTGCTGCTT A-CCCTCTGG G 5578 || ||||||| |||||||||| | |||||||| | TC-ATTCTTC GGTGCTGCTT ACCCCTCTGG G 750 hqPGS_C08HBa0336I24.1-_SGN-E314333+ (6326 5578) ******************************************************************************** EST sequence 87 +strand 589 n (File: SGN-E326293+) 1 GGTACTTTAG TCTCATACAG TTGTTGCCCT CCTGTACGGG ATGATGTCGA TTGCGTTCCG 61 TACTACAAGT TCCCTCCTAT GACGAAACTC CGCATCCGCC CCCCTGCTCA TGCGGCGGAT 121 GAGGAGTACG TAGCCAAGTA TCAATTGGCT ACAAGTCGAA TGAGGGAACT TGATAAAGAC 181 CCTTTTGACC CTCTTGGGTT TAAACAACAA GCTAATATTC ATTGTGCTTA TTGTAACGGT 241 GCTTATAAAA TTGGTGGTAA AGAATTGCAA GTTCATTTCT CGTGGCTTTT CTTTCCGTTC 301 CATAGATGGT ACTTGTACTT TTACGAAAGG ATATTGGGGT CACTTATTAA TGATCCAACT 361 TTTGCTTTAC CTTACTGGAA TTGGGATCAT CCAAAAGGTA TGCGTATACC TCCCATGTTT 421 GATCGTGAGG GTTCATCTCT TTACGATGAG AAACGTAACC AAAATCATCG CAATGGAACT 481 ATTATTGATC TTGGTCATTT TGGTAAGGAC GTCGAAACAC CTCAGCTACA GATAATGACT 541 AATAATTTAA CAACTAATGT ACCGTCAAAT GGTTACTAAT GCTCCTTGC Predicted gene structure (within gDNA segment 6872 to 5003): Exon 1 6200 5613 ( 588 n); cDNA 1 589 ( 589 n); score: 0.986 MATCH C08HBa0336I24.1- SGN-E326293+ 0.986 588 0.998 C PGS_C08HBa0336I24.1-_SGN-E326293+ (6200 5613) Alignment (genomic DNA sequence = upper lines): GGTACTGAAG TCTCATACAG TTGTTGCCCT CCTGTACCTG ATGATATCGA TAGCGTTCCG 6141 |||||| || |||||||||| |||||||||| ||||||| | ||||| |||| | |||||||| GGTACTTTAG TCTCATACAG TTGTTGCCCT CCTGTACGGG ATGATGTCGA TTGCGTTCCG 60 TACTACAAGT TCCCTCCTAT GACGAAACTC CGCATCCGCC CCCCTGCTCA TGCGGCGGAT 6081 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACTACAAGT TCCCTCCTAT GACGAAACTC CGCATCCGCC CCCCTGCTCA TGCGGCGGAT 120 GAGGAGTACG TAGCCAAGTA TCAATTGGCT ACAAGTCGAA TGAGGGAACT TGATAAAGAC 6021 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGGAGTACG TAGCCAAGTA TCAATTGGCT ACAAGTCGAA TGAGGGAACT TGATAAAGAC 180 CCTTTTGACC CTCTTGGGTT TAAACAACAA GCTAATATTC ATTGTGCTTA TTGTAACGGT 5961 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTTTGACC CTCTTGGGTT TAAACAACAA GCTAATATTC ATTGTGCTTA TTGTAACGGT 240 GCTTATAAAA TTGGTGGTAA AGAATTGCAA GTTCATTTCT CGTGGCTTTT CTTTCCGTTC 5901 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTTATAAAA TTGGTGGTAA AGAATTGCAA GTTCATTTCT CGTGGCTTTT CTTTCCGTTC 300 CATAGATGGT ACTTGTACTT TTACGAAAGG ATATTGGGGT CACTTATTAA TGATCCAACT 5841 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATAGATGGT ACTTGTACTT TTACGAAAGG ATATTGGGGT CACTTATTAA TGATCCAACT 360 TTTGCTTTAC CTTACTGGAA TTGGGATCAT CCAAAAGGTA TGCGTATACC TCCCATGTTT 5781 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGCTTTAC CTTACTGGAA TTGGGATCAT CCAAAAGGTA TGCGTATACC TCCCATGTTT 420 GATCGTGAGG GTTCATCTCT TTACGATGAG AAACGTAACC AAAATCATCG CAATGGAACT 5721 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATCGTGAGG GTTCATCTCT TTACGATGAG AAACGTAACC AAAATCATCG CAATGGAACT 480 ATTATTGATC TTGGTCATTT TGGTAAGGAC GTCGAAACAC CTCAGCTACA GATAATGACT 5661 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTATTGATC TTGGTCATTT TGGTAAGGAC GTCGAAACAC CTCAGCTACA GATAATGACT 540 AATAATTTAA C-ACTAATGT ACCGTCAAAT GGTTACTAAT GCTCCTTGC 5613 |||||||||| | |||||||| |||||||||| |||||||||| ||||||||| AATAATTTAA CAACTAATGT ACCGTCAAAT GGTTACTAAT GCTCCTTGC 589 hqPGS_C08HBa0336I24.1-_SGN-E326293+ (6200 5613) ******************************************************************************** EST sequence 66 +strand 577 n (File: SGN-E313171+) 1 AAGTCTCATA CAGTTGTTGC CCTCCTGTAC CTGATGATAT CGATAGCGTT CCGTACTACA 61 AGTTCCCTCC TATGACGAAA CTCCGCATCC GCCCCCCTGC TCATGCGGCG GATGAGGAGT 121 ACGTAGCCAA GTATCAATTG GCTACAAGTC GAATGAGGGA ACTTGATAAA GACCCTTTTG 181 ACCCTCTTGG GTTTAAACAA CAAGCTAATA TTCATTGTGC TTATTGTAAC GGTGCTTATA 241 AAATTGGTGG TAAAGAATTG CAAGTTCATT TCTCGTGGCT TTTCTTTCCG TTCCATAGAT 301 GGTACTTGTA CTTTTACGAA AGGATATTGG GGTCACTTAT TAATGATCCA ACTTTTGCTT 361 TACCTTACTG GAATTGGGAT CATCCAAAAG GTATGCGTAT ACCTCCCATG TTTGATCGTG 421 AGGGTTCATC TCTTTACGAT GAGAAACGTA ACCAAAATCA TCGCAATGGA ACTATTATTG 481 ATCTTGGTCA TTTTGGTAAG GACGTCGAAA CACCTCAGCT ACAGATAATG ACTAATAATT 541 TAACACTAAT GTACCGTCAA ATGGTTACTA ATGCTCC Predicted gene structure (within gDNA segment 6793 to 5007): Exon 1 6193 5617 ( 577 n); cDNA 1 577 ( 577 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E313171+ 1.000 577 1.000 C PGS_C08HBa0336I24.1-_SGN-E313171+ (6193 5617) Alignment (genomic DNA sequence = upper lines): AAGTCTCATA CAGTTGTTGC CCTCCTGTAC CTGATGATAT CGATAGCGTT CCGTACTACA 6134 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTCTCATA CAGTTGTTGC CCTCCTGTAC CTGATGATAT CGATAGCGTT CCGTACTACA 60 AGTTCCCTCC TATGACGAAA CTCCGCATCC GCCCCCCTGC TCATGCGGCG GATGAGGAGT 6074 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTCCCTCC TATGACGAAA CTCCGCATCC GCCCCCCTGC TCATGCGGCG GATGAGGAGT 120 ACGTAGCCAA GTATCAATTG GCTACAAGTC GAATGAGGGA ACTTGATAAA GACCCTTTTG 6014 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACGTAGCCAA GTATCAATTG GCTACAAGTC GAATGAGGGA ACTTGATAAA GACCCTTTTG 180 ACCCTCTTGG GTTTAAACAA CAAGCTAATA TTCATTGTGC TTATTGTAAC GGTGCTTATA 5954 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCCTCTTGG GTTTAAACAA CAAGCTAATA TTCATTGTGC TTATTGTAAC GGTGCTTATA 240 AAATTGGTGG TAAAGAATTG CAAGTTCATT TCTCGTGGCT TTTCTTTCCG TTCCATAGAT 5894 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATTGGTGG TAAAGAATTG CAAGTTCATT TCTCGTGGCT TTTCTTTCCG TTCCATAGAT 300 GGTACTTGTA CTTTTACGAA AGGATATTGG GGTCACTTAT TAATGATCCA ACTTTTGCTT 5834 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTACTTGTA CTTTTACGAA AGGATATTGG GGTCACTTAT TAATGATCCA ACTTTTGCTT 360 TACCTTACTG GAATTGGGAT CATCCAAAAG GTATGCGTAT ACCTCCCATG TTTGATCGTG 5774 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACCTTACTG GAATTGGGAT CATCCAAAAG GTATGCGTAT ACCTCCCATG TTTGATCGTG 420 AGGGTTCATC TCTTTACGAT GAGAAACGTA ACCAAAATCA TCGCAATGGA ACTATTATTG 5714 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGTTCATC TCTTTACGAT GAGAAACGTA ACCAAAATCA TCGCAATGGA ACTATTATTG 480 ATCTTGGTCA TTTTGGTAAG GACGTCGAAA CACCTCAGCT ACAGATAATG ACTAATAATT 5654 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCTTGGTCA TTTTGGTAAG GACGTCGAAA CACCTCAGCT ACAGATAATG ACTAATAATT 540 TAACACTAAT GTACCGTCAA ATGGTTACTA ATGCTCC 5617 |||||||||| |||||||||| |||||||||| ||||||| TAACACTAAT GTACCGTCAA ATGGTTACTA ATGCTCC 577 hqPGS_C08HBa0336I24.1-_SGN-E313171+ (6193 5617) ******************************************************************************** EST sequence 180 +strand 707 n (File: SGN-E317072+) 1 TTTCCTCCAT GGAAGGCGCT GTCAAAGTTT CAAGGTTTCA TGCAACGTTG GCGAGCATGA 61 CAAAAACCTT GACGCTGTTG ATAGGAGAAA TGTTCTTTTA GGGTTAGGAG GTTTTTATGG 121 TGCAGCTAAT CTTGCACCAT TAGCCTCTGC TGCTCCTATA CCACCACCTG ATCTCAAATC 181 TTGTGGTGTT GCCCATATAG ATGATAAAGG TACTGAAGTC TCATACAGTT GTTGCCCTCC 241 TGTACCTGAT GATATCGATA GCGTTCCGTA CTACAAGTTC CCTCCTATGA CGAAACTCCG 301 CATCCGCCCC CCTGCTCATG CGGCGGATGA GGAGTACGTA GCCAAGTATC AATTGGCTAC 361 AAGTCGAATG AGGGAACTTG ATAAAGACCC TTTTGACCCT CTTGGGTTTA AACAACAAGC 421 TAATATTCAT TGTGCTTATT GTAACGGTGC TTATAAAATT GGTGGTAAAG AATTGCAAGT 481 TCATTTCTCG TGGCTTTTCT TTCCGTTCCA TAGATGGTAC TTGTACTTTT ACGAAAGGAT 541 ATTGGGGTCA CTTATTAATG ATCCAACTTT TGCTTTACCT TACTGGAATT GGGATCATCC 601 AAAAGGTATG CGTATACCTC CCATGTTTGA TCGTGAGGGT TCATCTCTTT ACGATGAGAA 661 ACGTAACAAA ATCATCGCAA TGGAACTATT ATTGATCTTG GTCATTT Predicted gene structure (within gDNA segment 7008 to 5091): Exon 1 6408 5701 ( 708 n); cDNA 1 707 ( 707 n); score: 0.999 MATCH C08HBa0336I24.1- SGN-E317072+ 0.999 708 1.001 C PGS_C08HBa0336I24.1-_SGN-E317072+ (6408 5701) Alignment (genomic DNA sequence = upper lines): TTTCCTCCAT GGAAGGCGCT GTCAAAGTTT CAAGGTTTCA TGCAACGTTG GCGAGCATGA 6349 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCCTCCAT GGAAGGCGCT GTCAAAGTTT CAAGGTTTCA TGCAACGTTG GCGAGCATGA 60 CAAAAACCTT GACGCTGTTG ATAGGAGAAA TGTTCTTTTA GGGTTAGGAG GTTTTTATGG 6289 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAAACCTT GACGCTGTTG ATAGGAGAAA TGTTCTTTTA GGGTTAGGAG GTTTTTATGG 120 TGCAGCTAAT CTTGCACCAT TAGCCTCTGC TGCTCCTATA CCACCACCTG ATCTCAAATC 6229 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCAGCTAAT CTTGCACCAT TAGCCTCTGC TGCTCCTATA CCACCACCTG ATCTCAAATC 180 TTGTGGTGTT GCCCATATAG ATGATAAAGG TACTGAAGTC TCATACAGTT GTTGCCCTCC 6169 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTGGTGTT GCCCATATAG ATGATAAAGG TACTGAAGTC TCATACAGTT GTTGCCCTCC 240 TGTACCTGAT GATATCGATA GCGTTCCGTA CTACAAGTTC CCTCCTATGA CGAAACTCCG 6109 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTACCTGAT GATATCGATA GCGTTCCGTA CTACAAGTTC CCTCCTATGA CGAAACTCCG 300 CATCCGCCCC CCTGCTCATG CGGCGGATGA GGAGTACGTA GCCAAGTATC AATTGGCTAC 6049 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCCGCCCC CCTGCTCATG CGGCGGATGA GGAGTACGTA GCCAAGTATC AATTGGCTAC 360 AAGTCGAATG AGGGAACTTG ATAAAGACCC TTTTGACCCT CTTGGGTTTA AACAACAAGC 5989 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTCGAATG AGGGAACTTG ATAAAGACCC TTTTGACCCT CTTGGGTTTA AACAACAAGC 420 TAATATTCAT TGTGCTTATT GTAACGGTGC TTATAAAATT GGTGGTAAAG AATTGCAAGT 5929 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATATTCAT TGTGCTTATT GTAACGGTGC TTATAAAATT GGTGGTAAAG AATTGCAAGT 480 TCATTTCTCG TGGCTTTTCT TTCCGTTCCA TAGATGGTAC TTGTACTTTT ACGAAAGGAT 5869 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCATTTCTCG TGGCTTTTCT TTCCGTTCCA TAGATGGTAC TTGTACTTTT ACGAAAGGAT 540 ATTGGGGTCA CTTATTAATG ATCCAACTTT TGCTTTACCT TACTGGAATT GGGATCATCC 5809 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGGGGTCA CTTATTAATG ATCCAACTTT TGCTTTACCT TACTGGAATT GGGATCATCC 600 AAAAGGTATG CGTATACCTC CCATGTTTGA TCGTGAGGGT TCATCTCTTT ACGATGAGAA 5749 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAGGTATG CGTATACCTC CCATGTTTGA TCGTGAGGGT TCATCTCTTT ACGATGAGAA 660 ACGTAACCAA AATCATCGCA ATGGAACTAT TATTGATCTT GGTCATTT 5701 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||| ACGTAA-CAA AATCATCGCA ATGGAACTAT TATTGATCTT GGTCATTT 707 hqPGS_C08HBa0336I24.1-_SGN-E317072+ (6408 5701) ******************************************************************************** EST sequence 216 +strand 801 n (File: SGN-E329108+) 1 TTCTTCTACT CCTAATACTC TTCCTTTATT ATCCACCAAC AAATCCCTCT CTTCTCCCTT 61 CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA CCTTTCCTCC ATGGAAGGCG 121 CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT GACAAAAACC TTGACGCTGT 181 TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT GGTGCAGCTA ATCTTGCACC 241 ATTAGCCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA TCTTGTGGTG TTGCCCATAT 301 AGATGATAAA GGTACTGAAG TCTCATACAG TTGTTGCCCT CCTGTACCTG ATGATATCGA 361 TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC CGCATCCGCC CCCCTGCTCA 421 TGCGGCGGAT GAGGAGTACG TAGCCAAGTA TCAATTGGCT ACAAGTCGAA TGAGGGAACT 481 TGATAAAGAC CCTTTTGACC CTCTTGGGTT TAAACAACAA GCTAATATTC ATTGTGCTTA 541 TTGTAACGGT GCTTATAAAA TTGGTGGTAA AGAATTGCAA GTTCATTTCT CGTGGCTTTT 601 CTTTCCGTTC CATAGATGGT ACTTGTACTT TTACGAAAGG ATATTGGGGT CACTTATTAA 661 TGATCCAACT TTTGCTTTAC CTTACTGGAA TTGGGATCAT CCAAAGGTAT GCGTATACCT 721 CCCATGTTTG ATCGTGAAGG GTCATCTCTT TACGATGAGA AACGTAACCA AATCATCGCA 781 ATGGAACTAT TATTGATCTT G Predicted gene structure (within gDNA segment 7110 to 5098): Exon 1 6510 5708 ( 803 n); cDNA 1 801 ( 801 n); score: 0.995 MATCH C08HBa0336I24.1- SGN-E329108+ 0.995 803 1.002 C PGS_C08HBa0336I24.1-_SGN-E329108+ (6510 5708) Alignment (genomic DNA sequence = upper lines): TTCTTCTACT CCTAATACTC TTCCTTTATT ATCCACCAAC AAATCCCTCT CTTCTCCCTT 6451 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTCTACT CCTAATACTC TTCCTTTATT ATCCACCAAC AAATCCCTCT CTTCTCCCTT 60 CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA CCTTTCCTCC ATGGAAGGCG 6391 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA CCTTTCCTCC ATGGAAGGCG 120 CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT GACAAAAACC TTGACGCTGT 6331 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT GACAAAAACC TTGACGCTGT 180 TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT GGTGCAGCTA ATCTTGCACC 6271 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT GGTGCAGCTA ATCTTGCACC 240 ATTAGCCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA TCTTGTGGTG TTGCCCATAT 6211 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAGCCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA TCTTGTGGTG TTGCCCATAT 300 AGATGATAAA GGTACTGAAG TCTCATACAG TTGTTGCCCT CCTGTACCTG ATGATATCGA 6151 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATGATAAA GGTACTGAAG TCTCATACAG TTGTTGCCCT CCTGTACCTG ATGATATCGA 360 TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC CGCATCCGCC CCCCTGCTCA 6091 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC CGCATCCGCC CCCCTGCTCA 420 TGCGGCGGAT GAGGAGTACG TAGCCAAGTA TCAATTGGCT ACAAGTCGAA TGAGGGAACT 6031 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCGGCGGAT GAGGAGTACG TAGCCAAGTA TCAATTGGCT ACAAGTCGAA TGAGGGAACT 480 TGATAAAGAC CCTTTTGACC CTCTTGGGTT TAAACAACAA GCTAATATTC ATTGTGCTTA 5971 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATAAAGAC CCTTTTGACC CTCTTGGGTT TAAACAACAA GCTAATATTC ATTGTGCTTA 540 TTGTAACGGT GCTTATAAAA TTGGTGGTAA AGAATTGCAA GTTCATTTCT CGTGGCTTTT 5911 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTAACGGT GCTTATAAAA TTGGTGGTAA AGAATTGCAA GTTCATTTCT CGTGGCTTTT 600 CTTTCCGTTC CATAGATGGT ACTTGTACTT TTACGAAAGG ATATTGGGGT CACTTATTAA 5851 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTCCGTTC CATAGATGGT ACTTGTACTT TTACGAAAGG ATATTGGGGT CACTTATTAA 660 TGATCCAACT TTTGCTTTAC CTTACTGGAA TTGGGATCAT CCAAAAGGTA TGCGTATACC 5791 |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| TGATCCAACT TTTGCTTTAC CTTACTGGAA TTGGGATCAT CC-AAAGGTA TGCGTATACC 719 TCCCATGTTT GATCGTGAGG GTTCATCTCT TTACGATGAG AAACGTAACC AAAATCATCG 5731 |||||||||| |||||||| | | |||||||| |||||||||| |||||||||| ||||||||| TCCCATGTTT GATCGTGAAG GGTCATCTCT TTACGATGAG AAACGTAACC -AAATCATCG 778 CAATGGAACT ATTATTGATC TTG 5708 |||||||||| |||||||||| ||| CAATGGAACT ATTATTGATC TTG 801 hqPGS_C08HBa0336I24.1-_SGN-E329108+ (6510 5708) ******************************************************************************** EST sequence 152 +strand 786 n (File: SGN-E316553+) 1 ATTACTACTA CTCTTCCTTT ATGCACCAAC AAATCCCTCT CTTCTTCCTT CACCACCACC 61 AACTCATCCT TGTTATCAAA ACCCTCTCAA CTTTTCCTCC ACGGAAGGCG TAATCAAAGT 121 TTCAAGGTTT CATGCAACGC AAACAACGTT GACAAAAACC CTGACGCTGT TGATAGACGA 181 AACGTTCTTT TAGGGTTAGG AGGTCTTTAT GGTGCAGCTA ATCTTGCACC ATTAGCGACT 241 GCTGCACCTA TACCACCTCC TGATCTCAAG TCTTGTGGTA CTGCCCATGT AAAAGAAGGT 301 GTTGATGTAA TATACAGTTG TTGCCCTCCT GTACCCGATG ATATCGATAG TGTTCCGTAC 361 TACAAGTTCC CTTCTATGAC TAAACTCCGC ATCCGCCCCC CTGCTCATGC GGCGGATGAG 421 GAGTACGTAG CCAAGTATCA ATTGGCTACG AGTCGAATGA GGGAACTTGA TAAAGACCCC 481 TTTGACCCTC TTGGCTTTAA ACAACAAGCT AATATTCATT GTGCTTATTG CAACGGTGCT 541 TACAAAGTTG GTGGTAAAGA ATTGCAAGTT CATTTCTCGT GGCTTTTCTT TCCCTTTCAT 601 AGATGGTACT TGTACTTTTA CGAAAGAATT TTGGGATCAC TTATTAATGA TCCAACTTTT 661 GCTTTACCTT ACTGGAATTG GGATCATCCA AAAGGCATGC GTATACCTCC CATGTTTGAT 721 CGTGAGGGAT CATCTCTTTA CGATGAGAAA CGTAACTAAA TCATCGCAAT GGAACTATTA 781 TTGATC Predicted gene structure (within gDNA segment 8747 to 5101): Exon 1 6499 5711 ( 789 n); cDNA 5 786 ( 782 n); score: 0.913 MATCH C08HBa0336I24.1- SGN-E316553+ 0.913 789 1.004 C PGS_C08HBa0336I24.1-_SGN-E316553+ (6499 5711) Alignment (genomic DNA sequence = upper lines): CTAATACTCT TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTCCCTTC ACCAACAACC 6440 ||| |||||| |||| | || | |||||||| |||||||||| |||| ||||| |||| || | CTACTACTCT TCCT-T--TA TGCACCAACA AATCCCTCTC TTCTTCCTTC ACCACCACCA 61 ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC TGTCAAAGTT 6380 |||| | || ||||||||| |||||||||| ||||||||| |||||||| |||||||| ACTCATCCTT GTTATCAAAA CCCTCTCAAC TTTTCCTCCA CGGAAGGCGT AATCAAAGTT 121 TCAAGGTTTC ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT GATAGGAGAA 6320 |||||||||| |||||||| | | || ||||||||| |||||||||| ||||| ||| TCAAGGTTTC ATGCAACGCA AACAACGTTG ACAAAAACCC TGACGCTGTT GATAGACGAA 181 ATGTTCTTTT AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA TTAGCCTCTG 6260 | |||||||| |||||||||| ||| |||||| |||||||||| |||||||||| ||||| ||| ACGTTCTTTT AGGGTTAGGA GGTCTTTATG GTGCAGCTAA TCTTGCACCA TTAGCGACTG 241 CTGCTCCTAT ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA GATGATAAAG 6200 |||| ||||| |||||| ||| |||||||| | |||||||| ||||||| || | | ||| CTGCACCTAT ACCACCTCCT GATCTCAAGT CTTGTGGTAC TGCCCATGTA -A--AAGAAG 298 GTACTGAAGT CTCATACAGT TGTTGCCCTC CTGTACCTGA TGATATCGAT AGCGTTCCGT 6140 || ||| || ||||||| |||||||||| ||||||| || |||||||||| || ||||||| GTGTTGATGT AATATACAGT TGTTGCCCTC CTGTACCCGA TGATATCGAT AGTGTTCCGT 358 ACTACAAGTT CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT GCGGCGGATG 6080 |||||||||| |||| ||||| || ||||||| |||||||||| |||||||||| |||||||||| ACTACAAGTT CCCTTCTATG ACTAAACTCC GCATCCGCCC CCCTGCTCAT GCGGCGGATG 418 AGGAGTACGT AGCCAAGTAT CAATTGGCTA CAAGTCGAAT GAGGGAACTT GATAAAGACC 6020 |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| AGGAGTACGT AGCCAAGTAT CAATTGGCTA CGAGTCGAAT GAGGGAACTT GATAAAGACC 478 CTTTTGACCC TCTTGGGTTT AAACAACAAG CTAATATTCA TTGTGCTTAT TGTAACGGTG 5960 | |||||||| |||||| ||| |||||||||| |||||||||| |||||||||| || ||||||| CCTTTGACCC TCTTGGCTTT AAACAACAAG CTAATATTCA TTGTGCTTAT TGCAACGGTG 538 CTTATAAAAT TGGTGGTAAA GAATTGCAAG TTCATTTCTC GTGGCTTTTC TTTCCGTTCC 5900 |||| ||| | |||||||||| |||||||||| |||||||||| |||||||||| ||||| || | CTTACAAAGT TGGTGGTAAA GAATTGCAAG TTCATTTCTC GTGGCTTTTC TTTCCCTTTC 598 ATAGATGGTA CTTGTACTTT TACGAAAGGA TATTGGGGTC ACTTATTAAT GATCCAACTT 5840 |||||||||| |||||||||| |||||||| | | ||||| || |||||||||| |||||||||| ATAGATGGTA CTTGTACTTT TACGAAAGAA TTTTGGGATC ACTTATTAAT GATCCAACTT 658 TTGCTTTACC TTACTGGAAT TGGGATCATC CAAAAGGTAT GCGTATACCT CCCATGTTTG 5780 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| TTGCTTTACC TTACTGGAAT TGGGATCATC CAAAAGGCAT GCGTATACCT CCCATGTTTG 718 ATCGTGAGGG TTCATCTCTT TACGATGAGA AACGTAACCA AAATCATCGC AATGGAACTA 5720 |||||||||| ||||||||| |||||||||| ||||||| | |||||||||| |||||||||| ATCGTGAGGG ATCATCTCTT TACGATGAGA AACGTAA-CT AAATCATCGC AATGGAACTA 777 TTATTGATC 5711 ||||||||| TTATTGATC 786 hqPGS_C08HBa0336I24.1-_SGN-E316553+ (6499 5711) ******************************************************************************** EST sequence 162 +strand 760 n (File: SGN-E315871+) 1 AAATCCCTCT CTTCTCCCTT CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA 61 CCTTTCCTCC ATGGAAGGCG CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT 121 GACAAAAACC TTGACGCTGT TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT 181 GGTGCAGCTA ATCTTGCACC ATTAGCCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA 241 TCTTGTGGTG TTGCCCATAT AGATGATAAA GGTACTGAAG TCTCATACAG TTGTTGCCCT 301 CCTGTACCTG ATGATATCGA TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC 361 CGCATCCGCC CCCCTGCTCA TGCGGCGGAT GAGGAGTACG TAGCCAAGTA TCAATTGGCT 421 ACAAGTCGAA TGAGGGAACT TGATAAAGAC CCTTTTGACC CCTCTTGGGT TAAACAACAA 481 GCTAATATTC ATTGTGCTTA TTGTAACGGT GCTTTATAAA TTGGTGGGTA AGATTTGCAG 541 TTCATTTCTC GTGGCTTTTT CTTCCGNNTC ATAGATGGTA CTTGTACTTT TTACGAAAGG 601 ATATTGGGGT CACTTATTAA TGATCCNACT TTTGCTTTAC CTTACTGGAA NTGGGATCAT 661 CCAAAAGGTA TGCGTATACC TCCCCATGTT GATCGTGAGG GTTCATCTCT TTACGATGAG 721 AAACGTAACC AAAATCATCG CAATGGAAAC TATATTGATC Predicted gene structure (within gDNA segment 7070 to 4993): Exon 1 6470 5711 ( 760 n); cDNA 1 760 ( 760 n); score: 0.963 MATCH C08HBa0336I24.1- SGN-E315871+ 0.963 760 1.000 C PGS_C08HBa0336I24.1-_SGN-E315871+ (6470 5711) Alignment (genomic DNA sequence = upper lines): AAATCCCTCT CTTCTCCCTT CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA 6411 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATCCCTCT CTTCTCCCTT CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA 60 CCTTTCCTCC ATGGAAGGCG CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT 6351 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTTCCTCC ATGGAAGGCG CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT 120 GACAAAAACC TTGACGCTGT TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT 6291 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACAAAAACC TTGACGCTGT TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT 180 GGTGCAGCTA ATCTTGCACC ATTAGCCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA 6231 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGCAGCTA ATCTTGCACC ATTAGCCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA 240 TCTTGTGGTG TTGCCCATAT AGATGATAAA GGTACTGAAG TCTCATACAG TTGTTGCCCT 6171 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTGTGGTG TTGCCCATAT AGATGATAAA GGTACTGAAG TCTCATACAG TTGTTGCCCT 300 CCTGTACCTG ATGATATCGA TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC 6111 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTGTACCTG ATGATATCGA TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC 360 CGCATCCGCC CCCCTGCTCA TGCGGCGGAT GAGGAGTACG TAGCCAAGTA TCAATTGGCT 6051 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCATCCGCC CCCCTGCTCA TGCGGCGGAT GAGGAGTACG TAGCCAAGTA TCAATTGGCT 420 ACAAGTCGAA TGAGGGAACT TGATAAAGAC CCTTTTGA-C CCTCTTGGGT TTAAACAACA 5992 |||||||||| |||||||||| |||||||||| |||||||| | ||||||||| |||||||||| ACAAGTCGAA TGAGGGAACT TGATAAAGAC CCTTTTGACC CCTCTTGGG- TTAAACAACA 479 AGCTAATATT CATTGTGCTT ATTGTAACGG TGCTTATAAA ATTGGTGGTA AAGAATTGCA 5932 |||||||||| |||||||||| |||||||||| ||||| || |||||||| |||| |||| AGCTAATATT CATTGTGCTT ATTGTAACGG TGCTTTATAA ATTGGTGGGT AAGATTTGC- 538 AGTTCATTTC TCGTGGCTTT TCTTTCCGTT CCATAGATGG TACTTGTAC- TTTTACGAAA 5873 |||||||||| |||||||||| | ||||| ||||||||| ||||||||| |||||||||| AGTTCATTTC TCGTGGCTTT TTCTTCCGNN TCATAGATGG TACTTGTACT TTTTACGAAA 598 GGATATTGGG GTCACTTATT AATGATCCAA CTTTTGCTTT ACCTTACTGG AATTGGGATC 5813 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| || ||||||| GGATATTGGG GTCACTTATT AATGATCCNA CTTTTGCTTT ACCTTACTGG AANTGGGATC 658 ATCCAAAAGG TATGCGTATA CCTCCCATGT TTGATCGTGA GGGTTCATCT CTTTACGATG 5753 |||||||||| |||||||||| |||||| |||||||||| |||||||||| |||||||||| ATCCAAAAGG TATGCGTATA CCTCCCCATG TTGATCGTGA GGGTTCATCT CTTTACGATG 718 AGAAACGTAA CCAAAATCAT CGCAATGGAA CTATTATTGA TC 5711 |||||||||| |||||||||| |||||||||| |||||| || AGAAACGTAA CCAAAATCAT CGCAATGGAA ACTATATTGA TC 760 hqPGS_C08HBa0336I24.1-_SGN-E315871+ (6470 5711) ******************************************************************************** EST sequence 201 +strand 795 n (File: SGN-E328643+) 1 TTCTTCTACT CCTAATACTC TTCCTTTATT ATCCACCAAC AAATCCCTCT CTTCTCCCTT 61 CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA CCTTTCCTCC ATGGAAGGCG 121 CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT GACAAAAACC TTGACGCTGT 181 TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT GGTGCAGCTA ATCTTGCACC 241 ATTAGCCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA TCTTGTGGTG TTGCCCATAT 301 AGATGATAAA GGTACTGAAG TCTCATACAG TTGTTGCCCT CCTGTACCTG ATGATATCGA 361 TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC CGCATCCGCC CCCCTGCTCA 421 TGCGGCGGAT GAGGAGTACG TAGCCAAGTA TCAATTGGCT ACAAGTCGAA TGAGGGAACT 481 TGATAAAGAC CCTTTTGACC CTCTTGGGTT TAAACAACAA GCTAATATTC ATTGTGCTTA 541 TTGTAACGGT GCTTATAAAA TTGGTGGTAA AGAATTGCAA GTTCATTTCT CGTGGCTTTT 601 CTTTCCGTTC CATAGATGGT ACTTGTACTT TTACGAAAGG ATATTGGGGT CACTTATTAA 661 TGATCCAACT TTTGCTTTAC CTTACTGGAA TTGGGATCAT CCAAAGGTAT GCGTATACCT 721 CCCATGTTTG ATCGTGAAGG TTCATCTCTT TACGATGAGA AACGTAACCA AATCATCGCA 781 ATGGAACTAT TATTG Predicted gene structure (within gDNA segment 7110 to 5104): Exon 1 6510 5714 ( 797 n); cDNA 1 795 ( 795 n); score: 0.996 MATCH C08HBa0336I24.1- SGN-E328643+ 0.996 797 1.003 C PGS_C08HBa0336I24.1-_SGN-E328643+ (6510 5714) Alignment (genomic DNA sequence = upper lines): TTCTTCTACT CCTAATACTC TTCCTTTATT ATCCACCAAC AAATCCCTCT CTTCTCCCTT 6451 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTCTACT CCTAATACTC TTCCTTTATT ATCCACCAAC AAATCCCTCT CTTCTCCCTT 60 CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA CCTTTCCTCC ATGGAAGGCG 6391 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA CCTTTCCTCC ATGGAAGGCG 120 CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT GACAAAAACC TTGACGCTGT 6331 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT GACAAAAACC TTGACGCTGT 180 TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT GGTGCAGCTA ATCTTGCACC 6271 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT GGTGCAGCTA ATCTTGCACC 240 ATTAGCCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA TCTTGTGGTG TTGCCCATAT 6211 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAGCCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA TCTTGTGGTG TTGCCCATAT 300 AGATGATAAA GGTACTGAAG TCTCATACAG TTGTTGCCCT CCTGTACCTG ATGATATCGA 6151 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATGATAAA GGTACTGAAG TCTCATACAG TTGTTGCCCT CCTGTACCTG ATGATATCGA 360 TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC CGCATCCGCC CCCCTGCTCA 6091 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC CGCATCCGCC CCCCTGCTCA 420 TGCGGCGGAT GAGGAGTACG TAGCCAAGTA TCAATTGGCT ACAAGTCGAA TGAGGGAACT 6031 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCGGCGGAT GAGGAGTACG TAGCCAAGTA TCAATTGGCT ACAAGTCGAA TGAGGGAACT 480 TGATAAAGAC CCTTTTGACC CTCTTGGGTT TAAACAACAA GCTAATATTC ATTGTGCTTA 5971 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATAAAGAC CCTTTTGACC CTCTTGGGTT TAAACAACAA GCTAATATTC ATTGTGCTTA 540 TTGTAACGGT GCTTATAAAA TTGGTGGTAA AGAATTGCAA GTTCATTTCT CGTGGCTTTT 5911 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTAACGGT GCTTATAAAA TTGGTGGTAA AGAATTGCAA GTTCATTTCT CGTGGCTTTT 600 CTTTCCGTTC CATAGATGGT ACTTGTACTT TTACGAAAGG ATATTGGGGT CACTTATTAA 5851 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTCCGTTC CATAGATGGT ACTTGTACTT TTACGAAAGG ATATTGGGGT CACTTATTAA 660 TGATCCAACT TTTGCTTTAC CTTACTGGAA TTGGGATCAT CCAAAAGGTA TGCGTATACC 5791 |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| TGATCCAACT TTTGCTTTAC CTTACTGGAA TTGGGATCAT CC-AAAGGTA TGCGTATACC 719 TCCCATGTTT GATCGTGAGG GTTCATCTCT TTACGATGAG AAACGTAACC AAAATCATCG 5731 |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| ||||||||| TCCCATGTTT GATCGTGAAG GTTCATCTCT TTACGATGAG AAACGTAACC -AAATCATCG 778 CAATGGAACT ATTATTG 5714 |||||||||| ||||||| CAATGGAACT ATTATTG 795 hqPGS_C08HBa0336I24.1-_SGN-E328643+ (6510 5714) ******************************************************************************** EST sequence 91 +strand 533 n (File: SGN-E314737+) 1 CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA TGATAAAGGT ACTGAAGTCT 61 CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG CGTTCCGTAC TACAAGTTCC 121 CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC GGCGGATGAG GAGTACGTAG 181 CCAAGTATCA ATTGGCTACA AGTCGAATGA GGGAACTTGA TAAAGACCCT TTTGACCCTC 241 TTGGGTTTAA ACAACAAGCT AATATTCATT GTGCTTATTG TAACGGTGCT TATAAAATTG 301 GTGGTAAAGA ATTGCAAGTT CATTTCTCGT GGCTTTTCTT TCCGTTCCAT AGATGGTACT 361 TGTACTTTTA CGAAAGGATA TTGGGGTCAC TTATTAATGA TCCAACTTTT GCTTTACCTT 421 ACTGGAATTG GGATCATCCA AAAGGTATGC GTATACCTCC CATGTTTGAT CGTGAGGGTT 481 CATCTCTTTA CGATGAGAAA CGTAACCAAA ATCATCGCAA TGGAACTATT ATT Predicted gene structure (within gDNA segment 6847 to 5105): Exon 1 6247 5715 ( 533 n); cDNA 1 533 ( 533 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E314737+ 1.000 533 1.000 C PGS_C08HBa0336I24.1-_SGN-E314737+ (6247 5715) Alignment (genomic DNA sequence = upper lines): CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA TGATAAAGGT ACTGAAGTCT 6188 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA TGATAAAGGT ACTGAAGTCT 60 CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG CGTTCCGTAC TACAAGTTCC 6128 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG CGTTCCGTAC TACAAGTTCC 120 CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC GGCGGATGAG GAGTACGTAG 6068 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC GGCGGATGAG GAGTACGTAG 180 CCAAGTATCA ATTGGCTACA AGTCGAATGA GGGAACTTGA TAAAGACCCT TTTGACCCTC 6008 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAAGTATCA ATTGGCTACA AGTCGAATGA GGGAACTTGA TAAAGACCCT TTTGACCCTC 240 TTGGGTTTAA ACAACAAGCT AATATTCATT GTGCTTATTG TAACGGTGCT TATAAAATTG 5948 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGGTTTAA ACAACAAGCT AATATTCATT GTGCTTATTG TAACGGTGCT TATAAAATTG 300 GTGGTAAAGA ATTGCAAGTT CATTTCTCGT GGCTTTTCTT TCCGTTCCAT AGATGGTACT 5888 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGGTAAAGA ATTGCAAGTT CATTTCTCGT GGCTTTTCTT TCCGTTCCAT AGATGGTACT 360 TGTACTTTTA CGAAAGGATA TTGGGGTCAC TTATTAATGA TCCAACTTTT GCTTTACCTT 5828 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTACTTTTA CGAAAGGATA TTGGGGTCAC TTATTAATGA TCCAACTTTT GCTTTACCTT 420 ACTGGAATTG GGATCATCCA AAAGGTATGC GTATACCTCC CATGTTTGAT CGTGAGGGTT 5768 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTGGAATTG GGATCATCCA AAAGGTATGC GTATACCTCC CATGTTTGAT CGTGAGGGTT 480 CATCTCTTTA CGATGAGAAA CGTAACCAAA ATCATCGCAA TGGAACTATT ATT 5715 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| CATCTCTTTA CGATGAGAAA CGTAACCAAA ATCATCGCAA TGGAACTATT ATT 533 hqPGS_C08HBa0336I24.1-_SGN-E314737+ (6247 5715) ******************************************************************************** EST sequence 168 +strand 768 n (File: SGN-E315745+) 1 TTTATTATCC ACCAACAAAT CCCTCTCTTC TCCCTTCACC AACAACCACT CTACTTTCTT 61 ATCAAAACCC TCTCAACCTT TCCTCCATGG AAGGCGCTGT CAAAGTTTCA AGGTTTCATG 121 CAACGTTGGC GAGCATGACA AAAACCTTGA CGCTGTTGAT AGGAGAAATG TTCTTTTAGG 181 GTTAGGAGGT TTTTATGGTG CAGCTAATCT TGCACCATTA GCCTCTGCTG CTCCTATACC 241 ACCACCTGAT CTCAAATCTT GTGGTGTTGC CCATATAGAT GATAAAGGTA CTGAAGTCTC 301 ATACAGTTGT TGCCCTCCTG TACCTGATGA TATCGATAGC GTTCCGTACT ACAAGTTCCC 361 TCCTATGACG AAACTCCGCA TCCGCCCCCC TGCTCATGCG GCGGATGAGG AGTACGTAGC 421 CAAGTATCAA TTGGCTACAA GTCGAATGAG GGAACTTGAT AAAGACCCTT TTGACCCTCT 481 TGGGTTTAAA CAACAAGCTA ATATTCATTG TGCTTATTGT AACGGTGCTT ATAAAATTGG 541 TGGTAAAGAA TTGCAAGTTC ATTTCTCGTG GCTTTTCTTT CCGTTCCATA GATGGTACTT 601 GTACTTTTAC GAAAGGATAT TGGGGTCACT TATTAATGAT CCAACTTTTG CTTTACCTTA 661 CTGGGAATTG GGATCATCCA AAAGGTATGC GTATACCTCC CATGTTTTGA TCGTGAAGGT 721 TCATCTCTTT ACGATGAGAA ACGTAACAAA ATCATCGCAA TGGAACTA Predicted gene structure (within gDNA segment 7086 to 5110): Exon 1 6486 5720 ( 767 n); cDNA 1 768 ( 768 n); score: 0.991 MATCH C08HBa0336I24.1- SGN-E315745+ 0.991 767 0.999 C PGS_C08HBa0336I24.1-_SGN-E315745+ (6486 5720) Alignment (genomic DNA sequence = upper lines): TTTATTATCC ACCAACAAAT CCCTCTCTTC TCCCTTCACC AACAACCACT CTACTTTCTT 6427 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTATTATCC ACCAACAAAT CCCTCTCTTC TCCCTTCACC AACAACCACT CTACTTTCTT 60 ATCAAAACCC TCTCAACCTT TCCTCCATGG AAGGCGCTGT CAAAGTTTCA AGGTTTCATG 6367 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCAAAACCC TCTCAACCTT TCCTCCATGG AAGGCGCTGT CAAAGTTTCA AGGTTTCATG 120 CAACGTTGGC GAGCATGACA AAAACCTTGA CGCTGTTGAT AGGAGAAATG TTCTTTTAGG 6307 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACGTTGGC GAGCATGACA AAAACCTTGA CGCTGTTGAT AGGAGAAATG TTCTTTTAGG 180 GTTAGGAGGT TTTTATGGTG CAGCTAATCT TGCACCATTA GCCTCTGCTG CTCCTATACC 6247 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTAGGAGGT TTTTATGGTG CAGCTAATCT TGCACCATTA GCCTCTGCTG CTCCTATACC 240 ACCACCTGAT CTCAAATCTT GTGGTGTTGC CCATATAGAT GATAAAGGTA CTGAAGTCTC 6187 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCACCTGAT CTCAAATCTT GTGGTGTTGC CCATATAGAT GATAAAGGTA CTGAAGTCTC 300 ATACAGTTGT TGCCCTCCTG TACCTGATGA TATCGATAGC GTTCCGTACT ACAAGTTCCC 6127 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATACAGTTGT TGCCCTCCTG TACCTGATGA TATCGATAGC GTTCCGTACT ACAAGTTCCC 360 TCCTATGACG AAACTCCGCA TCCGCCCCCC TGCTCATGCG GCGGATGAGG AGTACGTAGC 6067 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTATGACG AAACTCCGCA TCCGCCCCCC TGCTCATGCG GCGGATGAGG AGTACGTAGC 420 CAAGTATCAA TTGGCTACAA GTCGAATGAG GGAACTTGAT AAAGACCCTT TTGACCCTCT 6007 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGTATCAA TTGGCTACAA GTCGAATGAG GGAACTTGAT AAAGACCCTT TTGACCCTCT 480 TGGGTTTAAA CAACAAGCTA ATATTCATTG TGCTTATTGT AACGGTGCTT ATAAAATTGG 5947 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGGTTTAAA CAACAAGCTA ATATTCATTG TGCTTATTGT AACGGTGCTT ATAAAATTGG 540 TGGTAAAGAA TTGCAAGTTC ATTTCTCGTG GCTTTTCTTT CCGTTCCATA GATGGTACTT 5887 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTAAAGAA TTGCAAGTTC ATTTCTCGTG GCTTTTCTTT CCGTTCCATA GATGGTACTT 600 GTACTTTTAC GAAAGGATAT TGGGGTCACT TATTAATGAT CCAACTTTTG CTTTACCTTA 5827 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTACTTTTAC GAAAGGATAT TGGGGTCACT TATTAATGAT CCAACTTTTG CTTTACCTTA 660 CT-GGAATTG GGATCATCCA AAAGGTATGC GTATACCTCC CATG-TTTGA TCGTGAGGGT 5769 || ||||||| |||||||||| |||||||||| |||||||||| |||| ||||| |||||| ||| CTGGGAATTG GGATCATCCA AAAGGTATGC GTATACCTCC CATGTTTTGA TCGTGAAGGT 720 TCATCTCTTT ACGATGAGAA ACGTAACCAA AATCATCGCA ATGGAACTA 5720 |||||||||| |||||||||| |||||| ||| |||||||||| ||||||||| TCATCTCTTT ACGATGAGAA ACGTAA-CAA AATCATCGCA ATGGAACTA 768 hqPGS_C08HBa0336I24.1-_SGN-E315745+ (6486 5720) ******************************************************************************** EST sequence 143 +strand 785 n (File: SGN-E315354+) 1 CTACTCCTAA TACTCTTCCT TTATTATCCA CCAACAAATC CCTCTCTTCT CCCTTCACCA 61 ACAACCACTC TACTTTCTTA TCAAAACCCT CTCAACCTTT CCTCCATGGA AGGCGCTGTC 121 AAAGTTTCAA GGTTTCATGC AACGTTGGCG AGCATGACAA AAACCTTGAC GCTGTTGATA 181 GGAGAAATGT TCTTTTAGGG TTAGGAGGTT TTTATGGTGC AGCTAATCTT GCACCATTAG 241 CCTCTGCTGC TCCTATACCA CCACCTGATC TCAAATCTTG TGGTGTTGCC CATATAGATG 301 ATAAAGGTAC TGAAGTCTCA TACAGTTGTT GCCCTCCTGT ACCTGATGAT ATCGATAGCG 361 TTCCGTACTA CAAGTTCCCT CCTATGACGA AACTCCGCAT CCGCCCCCCT GCTCATGCGG 421 CGGATGAGGA GTACGTAGCC AAGTATCAAT TGGCTACAAG TCGAATGAGG GAACTTGATA 481 AAGACCCTTT TGACCCTCTT GGGTTTAAAC AACAAGCTAA TATTCATTGT GCTTATTGTA 541 ACGGTGCTTA TAAAATTGGT GGTAAAGAAT TGCAAGTTCA TTTCTCGTGG CTTTTCTTTC 601 CGTTCCATAG ATGGTACTTG TACTTTTACG AAAGGATATT GGGGTCACTT ATTAATGATC 661 CAACTTTTGC TTTACCTTAC TGGAAATGGG ATCATCCAAA AGGTATGCGT ATACCTCCCA 721 TGTTTGATCG TGAGGGTTCA TCTCTTTACG ATGAGAAACG TAACCCAAAT CATCGCAATG 781 GAACT Predicted gene structure (within gDNA segment 7105 to 5111): Exon 1 6505 5721 ( 785 n); cDNA 1 785 ( 785 n); score: 0.997 MATCH C08HBa0336I24.1- SGN-E315354+ 0.997 785 1.000 C PGS_C08HBa0336I24.1-_SGN-E315354+ (6505 5721) Alignment (genomic DNA sequence = upper lines): CTACTCCTAA TACTCTTCCT TTATTATCCA CCAACAAATC CCTCTCTTCT CCCTTCACCA 6446 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTACTCCTAA TACTCTTCCT TTATTATCCA CCAACAAATC CCTCTCTTCT CCCTTCACCA 60 ACAACCACTC TACTTTCTTA TCAAAACCCT CTCAACCTTT CCTCCATGGA AGGCGCTGTC 6386 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAACCACTC TACTTTCTTA TCAAAACCCT CTCAACCTTT CCTCCATGGA AGGCGCTGTC 120 AAAGTTTCAA GGTTTCATGC AACGTTGGCG AGCATGACAA AAACCTTGAC GCTGTTGATA 6326 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGTTTCAA GGTTTCATGC AACGTTGGCG AGCATGACAA AAACCTTGAC GCTGTTGATA 180 GGAGAAATGT TCTTTTAGGG TTAGGAGGTT TTTATGGTGC AGCTAATCTT GCACCATTAG 6266 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAGAAATGT TCTTTTAGGG TTAGGAGGTT TTTATGGTGC AGCTAATCTT GCACCATTAG 240 CCTCTGCTGC TCCTATACCA CCACCTGATC TCAAATCTTG TGGTGTTGCC CATATAGATG 6206 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCTGCTGC TCCTATACCA CCACCTGATC TCAAATCTTG TGGTGTTGCC CATATAGATG 300 ATAAAGGTAC TGAAGTCTCA TACAGTTGTT GCCCTCCTGT ACCTGATGAT ATCGATAGCG 6146 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAAAGGTAC TGAAGTCTCA TACAGTTGTT GCCCTCCTGT ACCTGATGAT ATCGATAGCG 360 TTCCGTACTA CAAGTTCCCT CCTATGACGA AACTCCGCAT CCGCCCCCCT GCTCATGCGG 6086 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCGTACTA CAAGTTCCCT CCTATGACGA AACTCCGCAT CCGCCCCCCT GCTCATGCGG 420 CGGATGAGGA GTACGTAGCC AAGTATCAAT TGGCTACAAG TCGAATGAGG GAACTTGATA 6026 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGATGAGGA GTACGTAGCC AAGTATCAAT TGGCTACAAG TCGAATGAGG GAACTTGATA 480 AAGACCCTTT TGACCCTCTT GGGTTTAAAC AACAAGCTAA TATTCATTGT GCTTATTGTA 5966 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGACCCTTT TGACCCTCTT GGGTTTAAAC AACAAGCTAA TATTCATTGT GCTTATTGTA 540 ACGGTGCTTA TAAAATTGGT GGTAAAGAAT TGCAAGTTCA TTTCTCGTGG CTTTTCTTTC 5906 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACGGTGCTTA TAAAATTGGT GGTAAAGAAT TGCAAGTTCA TTTCTCGTGG CTTTTCTTTC 600 CGTTCCATAG ATGGTACTTG TACTTTTACG AAAGGATATT GGGGTCACTT ATTAATGATC 5846 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTCCATAG ATGGTACTTG TACTTTTACG AAAGGATATT GGGGTCACTT ATTAATGATC 660 CAACTTTTGC TTTACCTTAC TGGAATTGGG ATCATCCAAA AGGTATGCGT ATACCTCCCA 5786 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| CAACTTTTGC TTTACCTTAC TGGAAATGGG ATCATCCAAA AGGTATGCGT ATACCTCCCA 720 TGTTTGATCG TGAGGGTTCA TCTCTTTACG ATGAGAAACG TAACCAAAAT CATCGCAATG 5726 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| TGTTTGATCG TGAGGGTTCA TCTCTTTACG ATGAGAAACG TAACCCAAAT CATCGCAATG 780 GAACT 5721 ||||| GAACT 785 hqPGS_C08HBa0336I24.1-_SGN-E315354+ (6505 5721) ******************************************************************************** EST sequence 186 +strand 746 n (File: SGN-E327936+) 1 AAATCCCTCT CTTCTCCCTT CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA 61 CCTTTCCTCC ATGGAAGGCG CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT 121 GACAAAAACC TTGACGCTGT TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT 181 GGTGCAGCTA ATCTTGCACC ATTAGCCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA 241 TCTTGTGGTG TTGCCCATAT AGATGATAAA GGTACTGAAG TCTCATACAG TTGTTGCCCT 301 CCTGTACCTG ATGATATCGA TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC 361 CGCATCCGCC CCCCTGCTCA TGCGGCGGAT GAGGAGTACG TAGCCAAGTA TCAATTGGCT 421 ACAAGTCGAA TGAGGGAACT TGATAAAGAC CCTTTTGACC CTCTTGGGTT TAAACAACAA 481 GCTAATATTC ATTGTGCTTA TTGTAACGGT GCTTATAAAA TTGGTGGTAA AGAATTGCAA 541 GTTCATTTCT CGTGGCTTTT CTTTCCGTTC CATAGATGGT ACTTGTACTT TTACGAAAGG 601 ATATTGGGGT CACTTATTAA TGATCCAACT TTTGCTTTAC CTTACTGGAA TTGGGATCAT 661 CCANNAGGTA TGCGTATACC TCCCATGTTT GATCGTGAAG GGTCATCTCT TTACGATGAG 721 AAACGTACCA AAATCATCGC AATGGA Predicted gene structure (within gDNA segment 7070 to 5114): Exon 1 6470 5724 ( 747 n); cDNA 1 746 ( 746 n); score: 0.993 MATCH C08HBa0336I24.1- SGN-E327936+ 0.993 747 1.001 C PGS_C08HBa0336I24.1-_SGN-E327936+ (6470 5724) Alignment (genomic DNA sequence = upper lines): AAATCCCTCT CTTCTCCCTT CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA 6411 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATCCCTCT CTTCTCCCTT CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA 60 CCTTTCCTCC ATGGAAGGCG CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT 6351 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTTCCTCC ATGGAAGGCG CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT 120 GACAAAAACC TTGACGCTGT TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT 6291 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACAAAAACC TTGACGCTGT TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT 180 GGTGCAGCTA ATCTTGCACC ATTAGCCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA 6231 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGCAGCTA ATCTTGCACC ATTAGCCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA 240 TCTTGTGGTG TTGCCCATAT AGATGATAAA GGTACTGAAG TCTCATACAG TTGTTGCCCT 6171 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTGTGGTG TTGCCCATAT AGATGATAAA GGTACTGAAG TCTCATACAG TTGTTGCCCT 300 CCTGTACCTG ATGATATCGA TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC 6111 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTGTACCTG ATGATATCGA TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC 360 CGCATCCGCC CCCCTGCTCA TGCGGCGGAT GAGGAGTACG TAGCCAAGTA TCAATTGGCT 6051 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCATCCGCC CCCCTGCTCA TGCGGCGGAT GAGGAGTACG TAGCCAAGTA TCAATTGGCT 420 ACAAGTCGAA TGAGGGAACT TGATAAAGAC CCTTTTGACC CTCTTGGGTT TAAACAACAA 5991 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAGTCGAA TGAGGGAACT TGATAAAGAC CCTTTTGACC CTCTTGGGTT TAAACAACAA 480 GCTAATATTC ATTGTGCTTA TTGTAACGGT GCTTATAAAA TTGGTGGTAA AGAATTGCAA 5931 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTAATATTC ATTGTGCTTA TTGTAACGGT GCTTATAAAA TTGGTGGTAA AGAATTGCAA 540 GTTCATTTCT CGTGGCTTTT CTTTCCGTTC CATAGATGGT ACTTGTACTT TTACGAAAGG 5871 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTCATTTCT CGTGGCTTTT CTTTCCGTTC CATAGATGGT ACTTGTACTT TTACGAAAGG 600 ATATTGGGGT CACTTATTAA TGATCCAACT TTTGCTTTAC CTTACTGGAA TTGGGATCAT 5811 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATTGGGGT CACTTATTAA TGATCCAACT TTTGCTTTAC CTTACTGGAA TTGGGATCAT 660 CCAAAAGGTA TGCGTATACC TCCCATGTTT GATCGTGAGG GTTCATCTCT TTACGATGAG 5751 ||| ||||| |||||||||| |||||||||| |||||||| | | |||||||| |||||||||| CCANNAGGTA TGCGTATACC TCCCATGTTT GATCGTGAAG GGTCATCTCT TTACGATGAG 720 AAACGTAACC AAAATCATCG CAATGGA 5724 |||||| ||| |||||||||| ||||||| AAACGT-ACC AAAATCATCG CAATGGA 746 hqPGS_C08HBa0336I24.1-_SGN-E327936+ (6470 5724) ******************************************************************************** EST sequence 140 +strand 781 n (File: SGN-E315203+) 1 TTCTACTCCT AATACTCTTC CTTTATTATC CACCAACAAA TCCCTCTCTT CTCCCTTCAC 61 CAACAACCAC TCTACTTTCT TATCAAAACC CTCTCAACCT TTCCTCCATG GAAGGCGCTG 121 TCAAAGTTTC AAGGTTTCAT GCAACGTTGG CGAGCATGAC AAAAACCTTG ACGCTGTTGA 181 TAGGAGAAAT GTTCTTTTAG GGTTAGGAGG TTTTTATGGT GCAGCTAATC TTGCACCATT 241 AGCCTCTGCT GCTCCTATAC CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA 301 TGATAAAGGT ACTGAAGTCT CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG 361 CGTTCCGTAC TACAAGTTCC CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC 421 GGCGGATGAG GAGTACGTAG CCAAGTATCA ATTGGCTACA AGTCGAATGA GGGAACTTGA 481 TAAAGACCCT TTTGACCCTC TTGGGTTTAA ACAACAAGCT AATATTCATT GTGCTTATTG 541 TAACGGTGCT TATAAAATTG GTGGTAAAGA ATTGCAAGTT CATTTCTCGT GGCTTTTCTT 601 TCCGTTCCAT AGATGGTACT TGTACTTTTA CGAAAGGATA TTGGGGTCAC TTATTAATGA 661 TCCAACTTTT GCTTTACCTT ACTGGAATTG GGATCATCCA AAAGGTATGC GTATACCTCC 721 CCATGTTGAT CGTGAGGGTT CATCTCTTTA CGATGAGAAA CGTAACCAAA ATCATCGCAA 781 T Predicted gene structure (within gDNA segment 7107 to 5117): Exon 1 6507 5727 ( 781 n); cDNA 1 781 ( 781 n); score: 0.995 MATCH C08HBa0336I24.1- SGN-E315203+ 0.995 781 1.000 C PGS_C08HBa0336I24.1-_SGN-E315203+ (6507 5727) Alignment (genomic DNA sequence = upper lines): TTCTACTCCT AATACTCTTC CTTTATTATC CACCAACAAA TCCCTCTCTT CTCCCTTCAC 6448 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTACTCCT AATACTCTTC CTTTATTATC CACCAACAAA TCCCTCTCTT CTCCCTTCAC 60 CAACAACCAC TCTACTTTCT TATCAAAACC CTCTCAACCT TTCCTCCATG GAAGGCGCTG 6388 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACAACCAC TCTACTTTCT TATCAAAACC CTCTCAACCT TTCCTCCATG GAAGGCGCTG 120 TCAAAGTTTC AAGGTTTCAT GCAACGTTGG CGAGCATGAC AAAAACCTTG ACGCTGTTGA 6328 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAAGTTTC AAGGTTTCAT GCAACGTTGG CGAGCATGAC AAAAACCTTG ACGCTGTTGA 180 TAGGAGAAAT GTTCTTTTAG GGTTAGGAGG TTTTTATGGT GCAGCTAATC TTGCACCATT 6268 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGGAGAAAT GTTCTTTTAG GGTTAGGAGG TTTTTATGGT GCAGCTAATC TTGCACCATT 240 AGCCTCTGCT GCTCCTATAC CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA 6208 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCTCTGCT GCTCCTATAC CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA 300 TGATAAAGGT ACTGAAGTCT CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG 6148 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATAAAGGT ACTGAAGTCT CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG 360 CGTTCCGTAC TACAAGTTCC CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC 6088 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTCCGTAC TACAAGTTCC CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC 420 GGCGGATGAG GAGTACGTAG CCAAGTATCA ATTGGCTACA AGTCGAATGA GGGAACTTGA 6028 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCGGATGAG GAGTACGTAG CCAAGTATCA ATTGGCTACA AGTCGAATGA GGGAACTTGA 480 TAAAGACCCT TTTGACCCTC TTGGGTTTAA ACAACAAGCT AATATTCATT GTGCTTATTG 5968 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAGACCCT TTTGACCCTC TTGGGTTTAA ACAACAAGCT AATATTCATT GTGCTTATTG 540 TAACGGTGCT TATAAAATTG GTGGTAAAGA ATTGCAAGTT CATTTCTCGT GGCTTTTCTT 5908 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAACGGTGCT TATAAAATTG GTGGTAAAGA ATTGCAAGTT CATTTCTCGT GGCTTTTCTT 600 TCCGTTCCAT AGATGGTACT TGTACTTTTA CGAAAGGATA TTGGGGTCAC TTATTAATGA 5848 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCGTTCCAT AGATGGTACT TGTACTTTTA CGAAAGGATA TTGGGGTCAC TTATTAATGA 660 TCCAACTTTT GCTTTACCTT ACTGGAATTG GGATCATCCA AAAGGTATGC GTATACCTCC 5788 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCAACTTTT GCTTTACCTT ACTGGAATTG GGATCATCCA AAAGGTATGC GTATACCTCC 720 CATGTTTGAT CGTGAGGGTT CATCTCTTTA CGATGAGAAA CGTAACCAAA ATCATCGCAA 5728 | ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATGTTGAT CGTGAGGGTT CATCTCTTTA CGATGAGAAA CGTAACCAAA ATCATCGCAA 780 T 5727 | T 781 hqPGS_C08HBa0336I24.1-_SGN-E315203+ (6507 5727) ******************************************************************************** EST sequence 158 +strand 780 n (File: SGN-E327650+) 1 TGTCTTCTTC TACTCCTAAT ACTCTTCCTT TATTATCCAC CAACAAATCC CTCTCTTCTC 61 CCTTCACCAA CAACCACTCT ACTTTCTTAT CAAAACCCTC TCAACCTTTC CTCCATGGAA 121 GGCGCTGTCA AAGTTTCAAG GTTTCATGCA ACGTTGGCGA GCATGACAAA AACCTTGACG 181 CTGTTGATAG GAGAAATGTT CTTTTAGGGT TAGGAGGTTT TTATGGTGCA GCTAATCTTG 241 CACCATTAGC CTCTGCTGCT CCTATACCAC CACCTGATCT CAAATCTTGT GGTGTTGCCC 301 ATATAGATGA TAAAGGTACT GAAGTCTCAT ACAGTTGTTG CCCTCCTGTA CCTGATGATA 361 TCGATAGCGT TCCGTACTAC AAGTTCCCTC CTATGACGAA ACTCCGCATC CGCCCCCCTG 421 CTCATGCGGC GGATGAGGAG TACGTAGCCA AGTATCAATT GGCTACAAGT CGAATGAGGG 481 AACTTGATAA AGACCCTTTT GACCCTCTTG GGTTTAAACA ACAAGCTAAT ATTCATTGTG 541 CTTATTGTAA CGGTGCTTAT AAAATTGGTG GTAAAGAATT GCAAGTTCAT TTCTCGTGGC 601 TTTTCTTTCC GTTCCATAGA TGGTACTTGT ACTTTTACGA AAGGATATTG GGGTCACTTA 661 TTAATGATCC AACTTTTGCT TTACCTTACT GGAATTGGGA TCATCCAAAG GTATGCGTAT 721 ACCTCCCATG TTTGATCGTG AGGGTTCATC TCTTTACGAT GAGAAACGTA ACCAAATCAT Predicted gene structure (within gDNA segment 7114 to 5088): Exon 1 6514 5733 ( 782 n); cDNA 1 780 ( 780 n); score: 0.997 MATCH C08HBa0336I24.1- SGN-E327650+ 0.997 782 1.003 C PGS_C08HBa0336I24.1-_SGN-E327650+ (6514 5733) Alignment (genomic DNA sequence = upper lines): TGTCTTCTTC TACTCCTAAT ACTCTTCCTT TATTATCCAC CAACAAATCC CTCTCTTCTC 6455 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTCTTCTTC TACTCCTAAT ACTCTTCCTT TATTATCCAC CAACAAATCC CTCTCTTCTC 60 CCTTCACCAA CAACCACTCT ACTTTCTTAT CAAAACCCTC TCAACCTTTC CTCCATGGAA 6395 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTCACCAA CAACCACTCT ACTTTCTTAT CAAAACCCTC TCAACCTTTC CTCCATGGAA 120 GGCGCTGTCA AAGTTTCAAG GTTTCATGCA ACGTTGGCGA GCATGACAAA AACCTTGACG 6335 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCGCTGTCA AAGTTTCAAG GTTTCATGCA ACGTTGGCGA GCATGACAAA AACCTTGACG 180 CTGTTGATAG GAGAAATGTT CTTTTAGGGT TAGGAGGTTT TTATGGTGCA GCTAATCTTG 6275 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTTGATAG GAGAAATGTT CTTTTAGGGT TAGGAGGTTT TTATGGTGCA GCTAATCTTG 240 CACCATTAGC CTCTGCTGCT CCTATACCAC CACCTGATCT CAAATCTTGT GGTGTTGCCC 6215 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCATTAGC CTCTGCTGCT CCTATACCAC CACCTGATCT CAAATCTTGT GGTGTTGCCC 300 ATATAGATGA TAAAGGTACT GAAGTCTCAT ACAGTTGTTG CCCTCCTGTA CCTGATGATA 6155 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATAGATGA TAAAGGTACT GAAGTCTCAT ACAGTTGTTG CCCTCCTGTA CCTGATGATA 360 TCGATAGCGT TCCGTACTAC AAGTTCCCTC CTATGACGAA ACTCCGCATC CGCCCCCCTG 6095 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGATAGCGT TCCGTACTAC AAGTTCCCTC CTATGACGAA ACTCCGCATC CGCCCCCCTG 420 CTCATGCGGC GGATGAGGAG TACGTAGCCA AGTATCAATT GGCTACAAGT CGAATGAGGG 6035 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCATGCGGC GGATGAGGAG TACGTAGCCA AGTATCAATT GGCTACAAGT CGAATGAGGG 480 AACTTGATAA AGACCCTTTT GACCCTCTTG GGTTTAAACA ACAAGCTAAT ATTCATTGTG 5975 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACTTGATAA AGACCCTTTT GACCCTCTTG GGTTTAAACA ACAAGCTAAT ATTCATTGTG 540 CTTATTGTAA CGGTGCTTAT AAAATTGGTG GTAAAGAATT GCAAGTTCAT TTCTCGTGGC 5915 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTATTGTAA CGGTGCTTAT AAAATTGGTG GTAAAGAATT GCAAGTTCAT TTCTCGTGGC 600 TTTTCTTTCC GTTCCATAGA TGGTACTTGT ACTTTTACGA AAGGATATTG GGGTCACTTA 5855 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTCTTTCC GTTCCATAGA TGGTACTTGT ACTTTTACGA AAGGATATTG GGGTCACTTA 660 TTAATGATCC AACTTTTGCT TTACCTTACT GGAATTGGGA TCATCCAAAA GGTATGCGTA 5795 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| TTAATGATCC AACTTTTGCT TTACCTTACT GGAATTGGGA TCATCC-AAA GGTATGCGTA 719 TACCTCCCAT GTTTGATCGT GAGGGTTCAT CTCTTTACGA TGAGAAACGT AACCAAAATC 5735 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| TACCTCCCAT GTTTGATCGT GAGGGTTCAT CTCTTTACGA TGAGAAACGT AACC-AAATC 778 AT 5733 || AT 780 hqPGS_C08HBa0336I24.1-_SGN-E327650+ (6514 5733) ******************************************************************************** EST sequence 334 +strand 780 n (File: SGN-E322844+) 1 TCTTCTTCTT CTTCTATTAC TACTACTCTT CCTTTATGCA CCAACAAATC CCTCTCTTCT 61 TCCTTCACCA CCACCAACTC ATCCTTGTTA TCAAAACCCT CTCAACTTTT CCTCCACGGA 121 AGGCGTAATC AAAGTTTCAA GGTTTCATGC AACGCAAACA ACGTTGACAA AAACCCTGAC 181 GCTGTTGATA GACGAAACGT TCTTTTAGGG TTAGGAGGTC TTTATGGTGC AGCTAATCTT 241 GCACCATTAG CGACTGCTGC ACCTATACCA CCTCCTGATC TCAAGTCTTG TGGTACTGCC 301 CATGTAAAAG AAGGTGTTGA TGTAATATAC AGTTGTTGCC CTCCTGTACC CGATGATATC 361 GATAGTGTTC CGTACTACAA GTTCCCTTCT ATGACTAAAC TCCGCATCCG CCCCCCTGCT 421 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACGAGTCG AATGAGGGAA 481 CTTGATAAAG ACCCCTTTGA CCCTCTTGGC TTTAAACAAC AAGCTAATAT TCATTGTGCT 541 TATTGCAACG GTGCTTACAA AGTTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 601 TTCTTTCCCT TTCATAGATG GTACTTGTAC TTTTACGAAA GAATTTTGGG ATCACTTATT 661 AATGATCCAA CTTTTGCTTT ACCTTACTGG AATTGGGATC ATCCAAAAGG CATGCGTATA 721 CCTCCCATGT TTGATCGTGA GGGATCATCT CTTTACGATG AGAAAACGTA CCAAAATCAT Predicted gene structure (within gDNA segment 8897 to 4988): Exon 1 6512 5733 ( 780 n); cDNA 4 780 ( 777 n); score: 0.901 MATCH C08HBa0336I24.1- SGN-E322844+ 0.901 780 1.000 C PGS_C08HBa0336I24.1-_SGN-E322844+ (6512 5733) Alignment (genomic DNA sequence = upper lines): TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 6453 ||||||||| || || ||| | || | |||| ||||| |||||||||| ||||||| || TCTTCTTCTT CTATTACTAC TACTCTTCCT TTATGCACCA ACAAATCCCT CTCTTCTTCC 63 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 6393 ||||||| || | |||| | || |||||| |||||||||| ||| |||||| ||| |||||| TTCACCACCA CCAACTCATC CTTGTTATCA AAACCCTCTC AACTTTTCCT CCACGGAAGG 123 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 6333 || ||||| |||||||||| |||||||||| | | | ||||||||| || ||||||| CGTAATCAAA GTTTCAAGGT TTCATGCAAC GCAAACAACG TTGACAAAAA CCCTGACGCT 183 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 6273 |||||||| |||| ||||| |||||||||| |||||| ||| |||||||||| |||||||||| GTTGATAGAC GAAACGTTCT TTTAGGGTTA GGAGGTCTTT ATGGTGCAGC TAATCTTGCA 243 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 6213 |||||||| ||||||| || ||||||||| |||||||||| | |||||||| | ||||||| CCATTAGCGA CTGCTGCACC TATACCACCT CCTGATCTCA AGTCTTGTGG TACTGCCCAT 303 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 6153 || | | ||||| ||| || |||| |||||||||| |||||||||| ||||||||| GTA-A--AAG AAGGTGTTGA TGTAATATAC AGTTGTTGCC CTCCTGTACC CGATGATATC 360 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 6093 ||||| |||| |||||||||| ||||||| || ||||| |||| |||||||||| |||||||||| GATAGTGTTC CGTACTACAA GTTCCCTTCT ATGACTAAAC TCCGCATCCG CCCCCCTGCT 420 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 6033 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACGAGTCG AATGAGGGAA 480 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 5973 |||||||||| |||| ||||| ||||||||| |||||||||| |||||||||| |||||||||| CTTGATAAAG ACCCCTTTGA CCCTCTTGGC TTTAAACAAC AAGCTAATAT TCATTGTGCT 540 TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 5913 ||||| |||| ||||||| || | |||||||| |||||||||| |||||||||| |||||||||| TATTGCAACG GTGCTTACAA AGTTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 600 TTCTTTCCGT TCCATAGATG GTACTTGTAC TTTTACGAAA GGATATTGGG GTCACTTATT 5853 |||||||| | | |||||||| |||||||||| |||||||||| | || ||||| ||||||||| TTCTTTCCCT TTCATAGATG GTACTTGTAC TTTTACGAAA GAATTTTGGG ATCACTTATT 660 AATGATCCAA CTTTTGCTTT ACCTTACTGG AATTGGGATC ATCCAAAAGG TATGCGTATA 5793 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| AATGATCCAA CTTTTGCTTT ACCTTACTGG AATTGGGATC ATCCAAAAGG CATGCGTATA 720 CCTCCCATGT TTGATCGTGA GGGTTCATCT CTTTACGATG AGAAACGTAA CCAAAATCAT 5733 |||||||||| |||||||||| ||| |||||| |||||||||| ||||| | |||||||||| CCTCCCATGT TTGATCGTGA GGGATCATCT CTTTACGATG AGAAAACGTA CCAAAATCAT 780 hqPGS_C08HBa0336I24.1-_SGN-E322844+ (6512 5733) ******************************************************************************** EST sequence 297 +strand 760 n (File: SGN-E320579+) 1 TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC TTCACCAACA ACCACTCTAC 61 TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG CGCTGTCAAA GTTTCAAGGT 121 TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT GTTGATAAGA GAAATGTTCT 181 TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA CCATTAGCCT CTGCTGCTCC 241 TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT ATAGATGATA AAGGTACTGA 301 AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC GATAGCGTTC CGTACTACAA 361 GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT CATGCGGCGG ATGAGGAGTA 421 CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA CTTGATAAAG ACCCTTTTGA 481 CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT TATTGTAACG GTGCTTATAA 541 AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT TTCTTTCCGT TCCATAGATG 601 GTACTTGTAC TTTTACGAAA GGATATTGGG GTCACTTATT AATGATCCAA CTTTTGCTTT 661 ACCTTACTGG AATTGCGATC ATCCAAAAGG TATGCGTATA CCTCCCATGT TTGATCGTGA 721 CGGCTCATCT CTTTACGATG AGAAACGTAA CCAAAATCAT Predicted gene structure (within gDNA segment 7092 to 5123): Exon 1 6492 5733 ( 760 n); cDNA 1 760 ( 760 n); score: 0.995 MATCH C08HBa0336I24.1- SGN-E320579+ 0.995 760 1.000 C PGS_C08HBa0336I24.1-_SGN-E320579+ (6492 5733) Alignment (genomic DNA sequence = upper lines): TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC TTCACCAACA ACCACTCTAC 6433 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC TTCACCAACA ACCACTCTAC 60 TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG CGCTGTCAAA GTTTCAAGGT 6373 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG CGCTGTCAAA GTTTCAAGGT 120 TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT GTTGATAGGA GAAATGTTCT 6313 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT GTTGATAAGA GAAATGTTCT 180 TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA CCATTAGCCT CTGCTGCTCC 6253 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA CCATTAGCCT CTGCTGCTCC 240 TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT ATAGATGATA AAGGTACTGA 6193 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT ATAGATGATA AAGGTACTGA 300 AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC GATAGCGTTC CGTACTACAA 6133 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC GATAGCGTTC CGTACTACAA 360 GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT CATGCGGCGG ATGAGGAGTA 6073 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT CATGCGGCGG ATGAGGAGTA 420 CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA CTTGATAAAG ACCCTTTTGA 6013 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA CTTGATAAAG ACCCTTTTGA 480 CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT TATTGTAACG GTGCTTATAA 5953 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT TATTGTAACG GTGCTTATAA 540 AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT TTCTTTCCGT TCCATAGATG 5893 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT TTCTTTCCGT TCCATAGATG 600 GTACTTGTAC TTTTACGAAA GGATATTGGG GTCACTTATT AATGATCCAA CTTTTGCTTT 5833 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTACTTGTAC TTTTACGAAA GGATATTGGG GTCACTTATT AATGATCCAA CTTTTGCTTT 660 ACCTTACTGG AATTGGGATC ATCCAAAAGG TATGCGTATA CCTCCCATGT TTGATCGTGA 5773 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTTACTGG AATTGCGATC ATCCAAAAGG TATGCGTATA CCTCCCATGT TTGATCGTGA 720 GGGTTCATCT CTTTACGATG AGAAACGTAA CCAAAATCAT 5733 || |||||| |||||||||| |||||||||| |||||||||| CGGCTCATCT CTTTACGATG AGAAACGTAA CCAAAATCAT 760 hqPGS_C08HBa0336I24.1-_SGN-E320579+ (6492 5733) ******************************************************************************** EST sequence 154 +strand 775 n (File: SGN-E316597+) 1 AATGTCTTCT TCTACTCCTA ATACTCTTCC TTTATTATCC ACCAACAAAT CCCTCTCTTC 61 TCCCTTCACC AACAACCACT CTACTTTCTT ATCAAAACCC TCTCAACCTT TCCTCCATGG 121 AAGGCGCTGT CAAAGTTTCA AGGTTTCATG CAACGTTGGC GAGCATGACA AAAACCTTGA 181 CGCTGTTGAT AGGAGAAATG TTCTTTTAGG GTTAGGAGGT TTTTATGGTG CAGCTAATCT 241 TGCACCATTA GCCTCTGCTG CTCCTATACC ACCACCTGAT CTCAAATCTT GTGGTGTTGC 301 CCATATAGAT GATAAAGGTA CTGAAGTCTC ATACAGTTGT TGCCCTCCTG TACCTGATGA 361 TATCGATAGC GTTCCGTACT ACAAGTTCCC TCCTATGACG AAACTCCGCA TCCGCCCCCC 421 TGCTCATGCG GCGGATGAGG AGTACGTAGC CAAGTATCAA TTGGCTACAA GTCGAATGAG 481 GGAACTTGAT AAAGACCCTT TTGACCCTCT TGGGTTTAAA CAACAAGCTA ATATTCATTG 541 TGCTTATTGT AACGGTGCTT ATAAAATTGG TGGTAAAGAA TTGCAAGTTC ATTTCTCGTG 601 GCTTTTCTTT CCGTTCCATA GATGGTACTT GTACTTTTAC GAAAGGATAT TGGGGTCACT 661 TATTAATGAT CCAACTTTTG CTTTACCTTA CTGGAATTGG GATCATCCAA AAGGTATGCG 721 TATACCTCCC CATGTTTGAT CGTGAGGGGT CATCTCTTTA CGATGAGAAA CGTAA Predicted gene structure (within gDNA segment 7116 to 5133): Exon 1 6516 5743 ( 774 n); cDNA 1 775 ( 775 n); score: 0.995 MATCH C08HBa0336I24.1- SGN-E316597+ 0.995 774 0.999 C PGS_C08HBa0336I24.1-_SGN-E316597+ (6516 5743) Alignment (genomic DNA sequence = upper lines): AATGTCTTCT TCTACTCCTA ATACTCTTCC TTTATTATCC ACCAACAAAT CCCTCTCTTC 6457 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGTCTTCT TCTACTCCTA ATACTCTTCC TTTATTATCC ACCAACAAAT CCCTCTCTTC 60 TCCCTTCACC AACAACCACT CTACTTTCTT ATCAAAACCC TCTCAACCTT TCCTCCATGG 6397 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCCTTCACC AACAACCACT CTACTTTCTT ATCAAAACCC TCTCAACCTT TCCTCCATGG 120 AAGGCGCTGT CAAAGTTTCA AGGTTTCATG CAACGTTGGC GAGCATGACA AAAACCTTGA 6337 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGCGCTGT CAAAGTTTCA AGGTTTCATG CAACGTTGGC GAGCATGACA AAAACCTTGA 180 CGCTGTTGAT AGGAGAAATG TTCTTTTAGG GTTAGGAGGT TTTTATGGTG CAGCTAATCT 6277 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTGTTGAT AGGAGAAATG TTCTTTTAGG GTTAGGAGGT TTTTATGGTG CAGCTAATCT 240 TGCACCATTA GCCTCTGCTG CTCCTATACC ACCACCTGAT CTCAAATCTT GTGGTGTTGC 6217 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCACCATTA GCCTCTGCTG CTCCTATACC ACCACCTGAT CTCAAATCTT GTGGTGTTGC 300 CCATATAGAT GATAAAGGTA CTGAAGTCTC ATACAGTTGT TGCCCTCCTG TACCTGATGA 6157 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATATAGAT GATAAAGGTA CTGAAGTCTC ATACAGTTGT TGCCCTCCTG TACCTGATGA 360 TATCGATAGC GTTCCGTACT ACAAGTTCCC TCCTATGACG AAACTCCGCA TCCGCCCCCC 6097 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATCGATAGC GTTCCGTACT ACAAGTTCCC TCCTATGACG AAACTCCGCA TCCGCCCCCC 420 TGCTCATGCG GCGGATGAGG AGTACGTAGC CAAGTATCAA TTGGCTACAA GTCGAATGAG 6037 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCTCATGCG GCGGATGAGG AGTACGTAGC CAAGTATCAA TTGGCTACAA GTCGAATGAG 480 GGAACTTGAT AAAGACCCTT TTGACCCTCT TGGGTTTAAA CAACAAGCTA ATATTCATTG 5977 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAACTTGAT AAAGACCCTT TTGACCCTCT TGGGTTTAAA CAACAAGCTA ATATTCATTG 540 TGCTTATTGT AACGGTGCTT ATAAAATTGG TGGTAAAGAA TTGCAAGTTC ATTTCTCGTG 5917 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCTTATTGT AACGGTGCTT ATAAAATTGG TGGTAAAGAA TTGCAAGTTC ATTTCTCGTG 600 GCTTTTCTTT CCGTTCCATA GATGGTACTT GTACTTTTAC GAAAGGATAT TGGGGTCACT 5857 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTTTTCTTT CCGTTCCATA GATGGTACTT GTACTTTTAC GAAAGGATAT TGGGGTCACT 660 TATTAATGAT CCAACTTTTG CTTTACCTTA CTGGAATTGG GATCATCCAA AAGGTATGCG 5797 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATTAATGAT CCAACTTTTG CTTTACCTTA CTGGAATTGG GATCATCCAA AAGGTATGCG 720 TATACCT-CC CATGTTTGAT CGTGAGGGTT CATCTCTTTA CGATGAGAAA CGTAA 5743 ||||||| || |||||||||| |||||||| | |||||||||| |||||||||| ||||| TATACCTCCC CATGTTTGAT CGTGAGGGGT CATCTCTTTA CGATGAGAAA CGTAA 775 hqPGS_C08HBa0336I24.1-_SGN-E316597+ (6516 5743) ******************************************************************************** EST sequence 338 +strand 762 n (File: SGN-E319980+) 1 TGTCTTCTTC TTCTTCTATT ACTACTACTC TTCCTTTATG CACCAACAAA TCCCTCTCTT 61 CTTCCTTCAC CACCACCAAC TCATCCTTGT TATCAAAACC CTCTCAACTT TTCCTCCACG 121 GAAGGCGTAA TCAAAGTTTC AAGGTTTCAT GCAACGCAAA CAACGTTGAC AAAAACCCTG 181 ACGCTGTTGA TAGACGAAAC GTTCTTTTAG GGTTAGGAGG TCTTTATGGT GCAGCTAATC 241 TTGCACCATT AGCGACTGCT GCACCTATAC CACCTCCTGA TCTCAAGTCT TGTGGTACTG 301 CCCATGTAAA AGAAGGTGTT GATGTAATAT ACAGTTGTTG CCCTCCTGTA CCCGATGATA 361 TCGATAGTGT TCCGTACTAC AAGTTCCCTT CTATGACTAA ACTCCGCATC CGCCCCCCTG 421 CTCATGCGGC GGATGAGGAG TACGTAGCCA AGTATCAATT GGCTACGAGT CGAATGAGGG 481 AACTTGATAA AGACCCCTTT GACCCTCTTG GCTTTAAACA ACAAGCTAAT ATTCATTGTG 541 CTTATTGCAA CGGTGCTTAC AAAGTTGGTG GTAAAGAATT GCAAGTTCAT TTCTCGTGGC 601 TTTTCTTTCC CTTTCATAGA TGGTACTTGT ACTTTTACGA AAGAATTTTG GGATCACTTA 661 TTAATGATCC AACTTTTGCT TTACCTTACT GGAATTGGGA TCATCCAAAA GGCATGCGTA 721 TACCTCCCAT GTTTGATCGT GAGGGATCAT CTCTTTACGA TG Predicted gene structure (within gDNA segment 8917 to 5143): Exon 1 6512 5753 ( 760 n); cDNA 6 762 ( 757 n); score: 0.904 MATCH C08HBa0336I24.1- SGN-E319980+ 0.904 760 0.997 C PGS_C08HBa0336I24.1-_SGN-E319980+ (6512 5753) Alignment (genomic DNA sequence = upper lines): TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 6453 ||||||||| || || ||| | || | |||| ||||| |||||||||| ||||||| || TCTTCTTCTT CTATTACTAC TACTCTTCCT TTATGCACCA ACAAATCCCT CTCTTCTTCC 65 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 6393 ||||||| || | |||| | || |||||| |||||||||| ||| |||||| ||| |||||| TTCACCACCA CCAACTCATC CTTGTTATCA AAACCCTCTC AACTTTTCCT CCACGGAAGG 125 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 6333 || ||||| |||||||||| |||||||||| | | | ||||||||| || ||||||| CGTAATCAAA GTTTCAAGGT TTCATGCAAC GCAAACAACG TTGACAAAAA CCCTGACGCT 185 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 6273 |||||||| |||| ||||| |||||||||| |||||| ||| |||||||||| |||||||||| GTTGATAGAC GAAACGTTCT TTTAGGGTTA GGAGGTCTTT ATGGTGCAGC TAATCTTGCA 245 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 6213 |||||||| ||||||| || ||||||||| |||||||||| | |||||||| | ||||||| CCATTAGCGA CTGCTGCACC TATACCACCT CCTGATCTCA AGTCTTGTGG TACTGCCCAT 305 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 6153 || | | ||||| ||| || |||| |||||||||| |||||||||| ||||||||| GTA-A--AAG AAGGTGTTGA TGTAATATAC AGTTGTTGCC CTCCTGTACC CGATGATATC 362 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 6093 ||||| |||| |||||||||| ||||||| || ||||| |||| |||||||||| |||||||||| GATAGTGTTC CGTACTACAA GTTCCCTTCT ATGACTAAAC TCCGCATCCG CCCCCCTGCT 422 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 6033 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACGAGTCG AATGAGGGAA 482 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 5973 |||||||||| |||| ||||| ||||||||| |||||||||| |||||||||| |||||||||| CTTGATAAAG ACCCCTTTGA CCCTCTTGGC TTTAAACAAC AAGCTAATAT TCATTGTGCT 542 TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 5913 ||||| |||| ||||||| || | |||||||| |||||||||| |||||||||| |||||||||| TATTGCAACG GTGCTTACAA AGTTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 602 TTCTTTCCGT TCCATAGATG GTACTTGTAC TTTTACGAAA GGATATTGGG GTCACTTATT 5853 |||||||| | | |||||||| |||||||||| |||||||||| | || ||||| ||||||||| TTCTTTCCCT TTCATAGATG GTACTTGTAC TTTTACGAAA GAATTTTGGG ATCACTTATT 662 AATGATCCAA CTTTTGCTTT ACCTTACTGG AATTGGGATC ATCCAAAAGG TATGCGTATA 5793 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| AATGATCCAA CTTTTGCTTT ACCTTACTGG AATTGGGATC ATCCAAAAGG CATGCGTATA 722 CCTCCCATGT TTGATCGTGA GGGTTCATCT CTTTACGATG 5753 |||||||||| |||||||||| ||| |||||| |||||||||| CCTCCCATGT TTGATCGTGA GGGATCATCT CTTTACGATG 762 hqPGS_C08HBa0336I24.1-_SGN-E319980+ (6512 5753) ******************************************************************************** EST sequence 213 +strand 753 n (File: SGN-E328939+) 1 CTACTCCTAA TACTCTTCCT TTATTATCCA CCAACAAATC CCTCTCTTCT CCCTTCACCA 61 ACAACCACTC TACTTTCTTA TCAAAACCCT CTCAACCTTT CCTCCATGGA AGGCGCTGTC 121 AAAGTTTCAA GGTTTCATGC AACGTTGGCG AGCATGACAA AAACCTTGAC GCTGTTGATA 181 GGAGAAATGT TCTTTTAGGG TTAGGAGGTT TTTATGGTGC AGCTAATCTT GCACCATTAG 241 CCTCTGCTGC TCCTATACCA CCACCTGATC TCAAATCTTG TGGTGTTGCC CATATAGATG 301 ATAAAGGTAC TGAAGTCTCA TACAGTTGTT GCCCTCCTGT ACCTGATGAT ATCGATAGCG 361 TTCCGTACTA CAAGTTCCCT CCTATGACGA AACTCCGCAT CCGCCCCCCT GCTCATGCGG 421 CGGATGAGGA GTACGTAGCC AAGTATCAAT TGGCTACAAG TCGAATGAGG GAACTTGATA 481 AAGACCCTTT TGACCCTCTT GGGTTTAAAC AACAAGCTAA TATTCATTGT GCTTATTGTA 541 ACGGTGCTTA TAAAATTGGT GGTAAAGAAT TGCAAGTTCA TTTCTCGTGG CTTTTCTTTC 601 CGTTCCATAG ATGGTACTTG TACTTTTACG AAAGGATATT GGGGTCACTT ATTAATGATC 661 CAACTTTTGC TTTACCTTAC TGGAATTGGG ATCATCCAAA AGGTATGCGT ATACCTCCCA 721 TGTTTGATCG TGAGGGTTCA TCTCTTTACG ATG Predicted gene structure (within gDNA segment 7105 to 5143): Exon 1 6505 5753 ( 753 n); cDNA 1 753 ( 753 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E328939+ 1.000 753 1.000 C PGS_C08HBa0336I24.1-_SGN-E328939+ (6505 5753) Alignment (genomic DNA sequence = upper lines): CTACTCCTAA TACTCTTCCT TTATTATCCA CCAACAAATC CCTCTCTTCT CCCTTCACCA 6446 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTACTCCTAA TACTCTTCCT TTATTATCCA CCAACAAATC CCTCTCTTCT CCCTTCACCA 60 ACAACCACTC TACTTTCTTA TCAAAACCCT CTCAACCTTT CCTCCATGGA AGGCGCTGTC 6386 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAACCACTC TACTTTCTTA TCAAAACCCT CTCAACCTTT CCTCCATGGA AGGCGCTGTC 120 AAAGTTTCAA GGTTTCATGC AACGTTGGCG AGCATGACAA AAACCTTGAC GCTGTTGATA 6326 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGTTTCAA GGTTTCATGC AACGTTGGCG AGCATGACAA AAACCTTGAC GCTGTTGATA 180 GGAGAAATGT TCTTTTAGGG TTAGGAGGTT TTTATGGTGC AGCTAATCTT GCACCATTAG 6266 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAGAAATGT TCTTTTAGGG TTAGGAGGTT TTTATGGTGC AGCTAATCTT GCACCATTAG 240 CCTCTGCTGC TCCTATACCA CCACCTGATC TCAAATCTTG TGGTGTTGCC CATATAGATG 6206 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCTGCTGC TCCTATACCA CCACCTGATC TCAAATCTTG TGGTGTTGCC CATATAGATG 300 ATAAAGGTAC TGAAGTCTCA TACAGTTGTT GCCCTCCTGT ACCTGATGAT ATCGATAGCG 6146 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAAAGGTAC TGAAGTCTCA TACAGTTGTT GCCCTCCTGT ACCTGATGAT ATCGATAGCG 360 TTCCGTACTA CAAGTTCCCT CCTATGACGA AACTCCGCAT CCGCCCCCCT GCTCATGCGG 6086 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCGTACTA CAAGTTCCCT CCTATGACGA AACTCCGCAT CCGCCCCCCT GCTCATGCGG 420 CGGATGAGGA GTACGTAGCC AAGTATCAAT TGGCTACAAG TCGAATGAGG GAACTTGATA 6026 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGATGAGGA GTACGTAGCC AAGTATCAAT TGGCTACAAG TCGAATGAGG GAACTTGATA 480 AAGACCCTTT TGACCCTCTT GGGTTTAAAC AACAAGCTAA TATTCATTGT GCTTATTGTA 5966 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGACCCTTT TGACCCTCTT GGGTTTAAAC AACAAGCTAA TATTCATTGT GCTTATTGTA 540 ACGGTGCTTA TAAAATTGGT GGTAAAGAAT TGCAAGTTCA TTTCTCGTGG CTTTTCTTTC 5906 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACGGTGCTTA TAAAATTGGT GGTAAAGAAT TGCAAGTTCA TTTCTCGTGG CTTTTCTTTC 600 CGTTCCATAG ATGGTACTTG TACTTTTACG AAAGGATATT GGGGTCACTT ATTAATGATC 5846 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTCCATAG ATGGTACTTG TACTTTTACG AAAGGATATT GGGGTCACTT ATTAATGATC 660 CAACTTTTGC TTTACCTTAC TGGAATTGGG ATCATCCAAA AGGTATGCGT ATACCTCCCA 5786 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACTTTTGC TTTACCTTAC TGGAATTGGG ATCATCCAAA AGGTATGCGT ATACCTCCCA 720 TGTTTGATCG TGAGGGTTCA TCTCTTTACG ATG 5753 |||||||||| |||||||||| |||||||||| ||| TGTTTGATCG TGAGGGTTCA TCTCTTTACG ATG 753 hqPGS_C08HBa0336I24.1-_SGN-E328939+ (6505 5753) ******************************************************************************** EST sequence 166 +strand 732 n (File: SGN-E315843+) 1 TTATCCACCA ACAAATCCCT CTCTTCTCCC TTCACCAACA ACCACTCTAC TTTCTTATCA 61 AAACCCTCTC AACCTTTCCT CCATGGAAGG CGCTGTCAAA GTTTCAAGGT TTCATGCAAC 121 GTTGGCGAGC ATGACAAAAA CCTTGACGCT GTTGATAGGA GAAATGTTCT TTTAGGGTTA 181 GGAGGTTTTT ATGGTGCAGC TAATCTTGCA CCATTAGCCT CTGCTGCTCC TATACCACCA 241 CCTGATCTCA AATCTTGTGG TGTTGCCCAT ATAGATGATA AAGGTACTGA AGTCTCATAC 301 AGTTGTTGCC CTCCTGTACC TGATGATATC GATAGCGTTC CGTACTACAA GTTCCCTCCT 361 ATGACGAAAC TCCGCATCCG CCCCCCTGCT CATGCGGCGG ATGAGGAGTA CGTAGCCAAG 421 TATCAATTGG CTACAAGTCG AATGAGGGAA CTTGATAAAG ACCCTTTTGA CCCTCTTGGG 481 TTTAAACAAC AAGCTAATAT TCATTGTGCT TATTGTAACG GTGCTTATAA AATTGGTGGT 541 AAAGAATTGC AAGTTCATTT CTCGTGGCTT TTCTTTCCGT TCCATAGATG GTACTTGTAC 601 TTTTACGAAA GGATATTGGG GTCACTTATT AATGATCCAA CTTTTGCTTT ACCTTANCTG 661 GAATTGGGAT CATCCAAAAG GTATGCGTAT ACCTCCCATN GTTTGATCGT GAGGGGTCAT 721 CTCTTTACGA TG Predicted gene structure (within gDNA segment 7082 to 5143): Exon 1 6482 5753 ( 730 n); cDNA 1 732 ( 732 n); score: 0.992 MATCH C08HBa0336I24.1- SGN-E315843+ 0.992 730 0.997 C PGS_C08HBa0336I24.1-_SGN-E315843+ (6482 5753) Alignment (genomic DNA sequence = upper lines): TTATCCACCA ACAAATCCCT CTCTTCTCCC TTCACCAACA ACCACTCTAC TTTCTTATCA 6423 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTATCCACCA ACAAATCCCT CTCTTCTCCC TTCACCAACA ACCACTCTAC TTTCTTATCA 60 AAACCCTCTC AACCTTTCCT CCATGGAAGG CGCTGTCAAA GTTTCAAGGT TTCATGCAAC 6363 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACCCTCTC AACCTTTCCT CCATGGAAGG CGCTGTCAAA GTTTCAAGGT TTCATGCAAC 120 GTTGGCGAGC ATGACAAAAA CCTTGACGCT GTTGATAGGA GAAATGTTCT TTTAGGGTTA 6303 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGGCGAGC ATGACAAAAA CCTTGACGCT GTTGATAGGA GAAATGTTCT TTTAGGGTTA 180 GGAGGTTTTT ATGGTGCAGC TAATCTTGCA CCATTAGCCT CTGCTGCTCC TATACCACCA 6243 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAGGTTTTT ATGGTGCAGC TAATCTTGCA CCATTAGCCT CTGCTGCTCC TATACCACCA 240 CCTGATCTCA AATCTTGTGG TGTTGCCCAT ATAGATGATA AAGGTACTGA AGTCTCATAC 6183 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTGATCTCA AATCTTGTGG TGTTGCCCAT ATAGATGATA AAGGTACTGA AGTCTCATAC 300 AGTTGTTGCC CTCCTGTACC TGATGATATC GATAGCGTTC CGTACTACAA GTTCCCTCCT 6123 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTGTTGCC CTCCTGTACC TGATGATATC GATAGCGTTC CGTACTACAA GTTCCCTCCT 360 ATGACGAAAC TCCGCATCCG CCCCCCTGCT CATGCGGCGG ATGAGGAGTA CGTAGCCAAG 6063 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGACGAAAC TCCGCATCCG CCCCCCTGCT CATGCGGCGG ATGAGGAGTA CGTAGCCAAG 420 TATCAATTGG CTACAAGTCG AATGAGGGAA CTTGATAAAG ACCCTTTTGA CCCTCTTGGG 6003 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATCAATTGG CTACAAGTCG AATGAGGGAA CTTGATAAAG ACCCTTTTGA CCCTCTTGGG 480 TTTAAACAAC AAGCTAATAT TCATTGTGCT TATTGTAACG GTGCTTATAA AATTGGTGGT 5943 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTAAACAAC AAGCTAATAT TCATTGTGCT TATTGTAACG GTGCTTATAA AATTGGTGGT 540 AAAGAATTGC AAGTTCATTT CTCGTGGCTT TTCTTTCCGT TCCATAGATG GTACTTGTAC 5883 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGAATTGC AAGTTCATTT CTCGTGGCTT TTCTTTCCGT TCCATAGATG GTACTTGTAC 600 TTTTACGAAA GGATATTGGG GTCACTTATT AATGATCCAA CTTTTGCTTT ACCTTA-CTG 5824 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| TTTTACGAAA GGATATTGGG GTCACTTATT AATGATCCAA CTTTTGCTTT ACCTTANCTG 660 GAATTGGGAT CATCCAAAAG GTATGCGTAT ACCTCCCAT- GTTTGATCGT GAGGGTTCAT 5765 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| ||||| |||| GAATTGGGAT CATCCAAAAG GTATGCGTAT ACCTCCCATN GTTTGATCGT GAGGGGTCAT 720 CTCTTTACGA TG 5753 |||||||||| || CTCTTTACGA TG 732 hqPGS_C08HBa0336I24.1-_SGN-E315843+ (6482 5753) ******************************************************************************** EST sequence 146 +strand 755 n (File: SGN-E315180+) 1 TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 61 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 121 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 181 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 241 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 301 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 361 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 421 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 481 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 541 TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 601 TTCTTTCCGT TCCATAGATG GTACTTGTAC TTTTACGAAA GGATATTGGG GTCACTTATT 661 AATGATCCAA CTTTTGCTTT ACCTTACTNG GATTGGGATC ATCCAAAAGG TATGCGTATA 721 CCTCCCCATG TTGATCGTGA GGGTTCATCT CTTTA Predicted gene structure (within gDNA segment 7112 to 4887): Exon 1 6512 5758 ( 755 n); cDNA 1 755 ( 755 n); score: 0.992 MATCH C08HBa0336I24.1- SGN-E315180+ 0.992 755 1.000 C PGS_C08HBa0336I24.1-_SGN-E315180+ (6512 5758) Alignment (genomic DNA sequence = upper lines): TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 6453 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 60 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 6393 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 120 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 6333 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 180 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 6273 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 240 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 6213 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 300 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 6153 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 360 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 6093 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 420 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 6033 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 480 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 5973 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 540 TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 5913 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 600 TTCTTTCCGT TCCATAGATG GTACTTGTAC TTTTACGAAA GGATATTGGG GTCACTTATT 5853 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTTCCGT TCCATAGATG GTACTTGTAC TTTTACGAAA GGATATTGGG GTCACTTATT 660 AATGATCCAA CTTTTGCTTT ACCTTACTGG AATTGGGATC ATCCAAAAGG TATGCGTATA 5793 |||||||||| |||||||||| |||||||| | ||||||||| |||||||||| |||||||||| AATGATCCAA CTTTTGCTTT ACCTTACTNG GATTGGGATC ATCCAAAAGG TATGCGTATA 720 CCTCCCATGT TTGATCGTGA GGGTTCATCT CTTTA 5758 |||||| |||||||||| |||||||||| ||||| CCTCCCCATG TTGATCGTGA GGGTTCATCT CTTTA 755 hqPGS_C08HBa0336I24.1-_SGN-E315180+ (6512 5758) ******************************************************************************** EST sequence 85 +strand 422 n (File: SGN-E326412+) 1 GTGTTGCCCT CCTTTTCGTG GAATTGGAAC CAGCAAGACA TACTCCAAGT TCCCTACTAT 61 GACAAAACTC CTCATCCCCC CCCATGATCA TGCGACAAAT GCTGAGTACG TAGCCAAGTA 121 TCAATTGTCT ACAAGTCTAA TGAGGGAACT TGATAAAGAC CCTTTTGACC CTCTAGGGTT 181 TAAACAACAA GCTAATATTC ATTGTGCTTA TTGTAACGGT GCTTATAAAA TTGGAGGTAA 241 AGAATTGCAA GTTCATTTCT CGAGGCTTTT CTTTCCGTTC CATAGATGGT ACTTGTACTT 301 TTACGAAAGG ATATTGGGGT CACTTATTAA TGATCCAACT TTTGCTTTAC CTTACTGGAA 361 TTGGGATCAT CCAAAAAGTA TGCGCATACC TCCCATGTTT GAACGAGAGG GTTCATCTTT 421 TT Predicted gene structure (within gDNA segment 7707 to 4969): Exon 1 6179 5759 ( 421 n); cDNA 2 422 ( 421 n); score: 0.905 MATCH C08HBa0336I24.1- SGN-E326412+ 0.905 421 0.998 C PGS_C08HBa0336I24.1-_SGN-E326412+ (6179 5759) Alignment (genomic DNA sequence = upper lines): TGTTGCCCTC CTGTACCTGA TGATATCGAT AGCGTTCCGT ACTACAAGTT CCCTCCTATG 6120 |||||||||| || | | || | ||| | | ||| |||||| |||| ||||| TGTTGCCCTC CTTTTCGTGG AATTGGAACC AGCAAGACAT ACTCCAAGTT CCCTACTATG 61 ACGAAACTCC GCATCCGCCC CCCTGCTCAT GCGGCGGATG AGGAGTACGT AGCCAAGTAT 6060 || ||||||| ||||| ||| || || |||| ||| | ||| |||||||| |||||||||| ACAAAACTCC TCATCCCCCC CCATGATCAT GCGACAAATG CTGAGTACGT AGCCAAGTAT 121 CAATTGGCTA CAAGTCGAAT GAGGGAACTT GATAAAGACC CTTTTGACCC TCTTGGGTTT 6000 |||||| ||| |||||| ||| |||||||||| |||||||||| |||||||||| ||| |||||| CAATTGTCTA CAAGTCTAAT GAGGGAACTT GATAAAGACC CTTTTGACCC TCTAGGGTTT 181 AAACAACAAG CTAATATTCA TTGTGCTTAT TGTAACGGTG CTTATAAAAT TGGTGGTAAA 5940 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| AAACAACAAG CTAATATTCA TTGTGCTTAT TGTAACGGTG CTTATAAAAT TGGAGGTAAA 241 GAATTGCAAG TTCATTTCTC GTGGCTTTTC TTTCCGTTCC ATAGATGGTA CTTGTACTTT 5880 |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| GAATTGCAAG TTCATTTCTC GAGGCTTTTC TTTCCGTTCC ATAGATGGTA CTTGTACTTT 301 TACGAAAGGA TATTGGGGTC ACTTATTAAT GATCCAACTT TTGCTTTACC TTACTGGAAT 5820 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACGAAAGGA TATTGGGGTC ACTTATTAAT GATCCAACTT TTGCTTTACC TTACTGGAAT 361 TGGGATCATC CAAAAGGTAT GCGTATACCT CCCATGTTTG ATCGTGAGGG TTCATCTCTT 5760 |||||||||| ||||| |||| ||| |||||| |||||||||| | || ||||| ||||||| || TGGGATCATC CAAAAAGTAT GCGCATACCT CCCATGTTTG AACGAGAGGG TTCATCTTTT 421 T 5759 | T 422 hqPGS_C08HBa0336I24.1-_SGN-E326412+ (6179 5759) ******************************************************************************** EST sequence 218 +strand 757 n (File: SGN-E317780+) 1 AGGGTCTTCT TCTTCTTCTA TTACTACTAC TCTTCCTTTA TGCACCAACA AATCCCTCTC 61 TTCTTCCTTC ACCACCACCA ACTCATCCTT GTTATCAAAA CCCTCTCAAC TTTTCCTCCA 121 CGGAAGGCGT AATCAAAGTT TCAAGGTTTC ATGCAACGCA AACAACGTTG ACAAAAACCC 181 TGACGCTGTT GATAGACGAA ACGTTCTTTT AGGGTTAGGA GGTCTTTATG GTGCAGCTAA 241 TCTTGCACCA TTAGCGACTG CTGCACCTAT ACCACCTCCT GATCTCAAGT CTTGTGGTAC 301 TGCCCATGTA AAAGAAGGTG TTGATGTAAT ATACAGTTGT TGCCCTCCTG TACCCGATGA 361 TATCGATAGT GTTCCGTACT ACAAGTTCCC TTCTATGACT AAACTCCGCA TCCGCCCCCC 421 TGCTCATGCG GCGGATGAGG AGTACGTAAC CAAGTATCAA TTGGCTACGA GTCGAATGAG 481 GGAACTTGAT AAAGACCCCT TTGACCCTCT TGGCTTTAAA CAACAAGCTA ATATTCATTG 541 TGCTTATTGC AACGGTGCTT ACAAAGTTGG TGGTAAAGAA TTGCAAGTTC ATTTCTCGTG 601 GCTTTTCTTT CCCTTTCATA GATGGTACTT GTACTTTTAC GAAAGAATTT TGGGATCACT 661 TATTAATGAT CCAACTTTTG CTCTACCTTA CTGGAAATGC GATCATCCAA AAGGCATGCG 721 TATACCTCCC ATGCTTGATC GTGAGGGATC ATCTCTT Predicted gene structure (within gDNA segment 8937 to 4475): Exon 1 6512 5760 ( 753 n); cDNA 8 757 ( 750 n); score: 0.896 MATCH C08HBa0336I24.1- SGN-E317780+ 0.896 753 0.995 C PGS_C08HBa0336I24.1-_SGN-E317780+ (6512 5760) Alignment (genomic DNA sequence = upper lines): TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 6453 ||||||||| || || ||| | || | |||| ||||| |||||||||| ||||||| || TCTTCTTCTT CTATTACTAC TACTCTTCCT TTATGCACCA ACAAATCCCT CTCTTCTTCC 67 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 6393 ||||||| || | |||| | || |||||| |||||||||| ||| |||||| ||| |||||| TTCACCACCA CCAACTCATC CTTGTTATCA AAACCCTCTC AACTTTTCCT CCACGGAAGG 127 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 6333 || ||||| |||||||||| |||||||||| | | | ||||||||| || ||||||| CGTAATCAAA GTTTCAAGGT TTCATGCAAC GCAAACAACG TTGACAAAAA CCCTGACGCT 187 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 6273 |||||||| |||| ||||| |||||||||| |||||| ||| |||||||||| |||||||||| GTTGATAGAC GAAACGTTCT TTTAGGGTTA GGAGGTCTTT ATGGTGCAGC TAATCTTGCA 247 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 6213 |||||||| ||||||| || ||||||||| |||||||||| | |||||||| | ||||||| CCATTAGCGA CTGCTGCACC TATACCACCT CCTGATCTCA AGTCTTGTGG TACTGCCCAT 307 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 6153 || | | ||||| ||| || |||| |||||||||| |||||||||| ||||||||| GTA-A--AAG AAGGTGTTGA TGTAATATAC AGTTGTTGCC CTCCTGTACC CGATGATATC 364 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 6093 ||||| |||| |||||||||| ||||||| || ||||| |||| |||||||||| |||||||||| GATAGTGTTC CGTACTACAA GTTCCCTTCT ATGACTAAAC TCCGCATCCG CCCCCCTGCT 424 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 6033 |||||||||| |||||||||| |||| ||||| |||||||||| |||| ||||| |||||||||| CATGCGGCGG ATGAGGAGTA CGTAACCAAG TATCAATTGG CTACGAGTCG AATGAGGGAA 484 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 5973 |||||||||| |||| ||||| ||||||||| |||||||||| |||||||||| |||||||||| CTTGATAAAG ACCCCTTTGA CCCTCTTGGC TTTAAACAAC AAGCTAATAT TCATTGTGCT 544 TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 5913 ||||| |||| ||||||| || | |||||||| |||||||||| |||||||||| |||||||||| TATTGCAACG GTGCTTACAA AGTTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 604 TTCTTTCCGT TCCATAGATG GTACTTGTAC TTTTACGAAA GGATATTGGG GTCACTTATT 5853 |||||||| | | |||||||| |||||||||| |||||||||| | || ||||| ||||||||| TTCTTTCCCT TTCATAGATG GTACTTGTAC TTTTACGAAA GAATTTTGGG ATCACTTATT 664 AATGATCCAA CTTTTGCTTT ACCTTACTGG AATTGGGATC ATCCAAAAGG TATGCGTATA 5793 |||||||||| |||||||| | |||||||||| || || |||| |||||||||| ||||||||| AATGATCCAA CTTTTGCTCT ACCTTACTGG AAATGCGATC ATCCAAAAGG CATGCGTATA 724 CCTCCCATGT TTGATCGTGA GGGTTCATCT CTT 5760 ||||||||| |||||||||| ||| |||||| ||| CCTCCCATGC TTGATCGTGA GGGATCATCT CTT 757 hqPGS_C08HBa0336I24.1-_SGN-E317780+ (6512 5760) ******************************************************************************** EST sequence 211 +strand 734 n (File: SGN-E318091+) 1 TCTTCTACTC CTAATACTCT TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTCCCTTC 61 ACCAACAACC ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC 121 TGTCAAAGTT TCAAGGTTTC ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT 181 GATAGGAGAA ATGTTCTTTT AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA 241 TTAGCCTCTG CTGCTCCTAT ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA 301 GATGATAAAG GTACTGAAGT CTCATACAGT TGTTGCCCTC CTGTACCTGA TGATATCGAT 361 AGCGTTCCGT ACTACAAGTT CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT 421 GCGGCGGATG AGGAGTACGT AGCCAAGTAT CAATTGGCTA CAAGTCGAAT GAGGGAACTT 481 GATAAAGACC CTTTTGACCC TCTTGGGTTT AAACAACAAG CTAATATTCA TTGTGCTTAT 541 TGTAACGGTG CTTATAAAAT TGGTGGTAAA GAATTGCAAG TTCATTTCTC GTGGCTTTTC 601 TTTCCGTTCC ATAGATGGTA CTTGTACTTT TACGAAAGGA TATTGGGGTC ACTTATTAAT 661 GATCCAACTT TTGCTTTACC TTACTGGAAT TGGGATCATC CAAAAGGTAT GCGTATACCT 721 CCCATGTTTG ATCG Predicted gene structure (within gDNA segment 7109 to 5166): Exon 1 6509 5776 ( 734 n); cDNA 1 734 ( 734 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E318091+ 1.000 734 1.000 C PGS_C08HBa0336I24.1-_SGN-E318091+ (6509 5776) Alignment (genomic DNA sequence = upper lines): TCTTCTACTC CTAATACTCT TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTCCCTTC 6450 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTCTACTC CTAATACTCT TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTCCCTTC 60 ACCAACAACC ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC 6390 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAACAACC ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC 120 TGTCAAAGTT TCAAGGTTTC ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT 6330 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTCAAAGTT TCAAGGTTTC ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT 180 GATAGGAGAA ATGTTCTTTT AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA 6270 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAGGAGAA ATGTTCTTTT AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA 240 TTAGCCTCTG CTGCTCCTAT ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA 6210 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAGCCTCTG CTGCTCCTAT ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA 300 GATGATAAAG GTACTGAAGT CTCATACAGT TGTTGCCCTC CTGTACCTGA TGATATCGAT 6150 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGATAAAG GTACTGAAGT CTCATACAGT TGTTGCCCTC CTGTACCTGA TGATATCGAT 360 AGCGTTCCGT ACTACAAGTT CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT 6090 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCGTTCCGT ACTACAAGTT CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT 420 GCGGCGGATG AGGAGTACGT AGCCAAGTAT CAATTGGCTA CAAGTCGAAT GAGGGAACTT 6030 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGGCGGATG AGGAGTACGT AGCCAAGTAT CAATTGGCTA CAAGTCGAAT GAGGGAACTT 480 GATAAAGACC CTTTTGACCC TCTTGGGTTT AAACAACAAG CTAATATTCA TTGTGCTTAT 5970 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAAAGACC CTTTTGACCC TCTTGGGTTT AAACAACAAG CTAATATTCA TTGTGCTTAT 540 TGTAACGGTG CTTATAAAAT TGGTGGTAAA GAATTGCAAG TTCATTTCTC GTGGCTTTTC 5910 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTAACGGTG CTTATAAAAT TGGTGGTAAA GAATTGCAAG TTCATTTCTC GTGGCTTTTC 600 TTTCCGTTCC ATAGATGGTA CTTGTACTTT TACGAAAGGA TATTGGGGTC ACTTATTAAT 5850 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCCGTTCC ATAGATGGTA CTTGTACTTT TACGAAAGGA TATTGGGGTC ACTTATTAAT 660 GATCCAACTT TTGCTTTACC TTACTGGAAT TGGGATCATC CAAAAGGTAT GCGTATACCT 5790 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATCCAACTT TTGCTTTACC TTACTGGAAT TGGGATCATC CAAAAGGTAT GCGTATACCT 720 CCCATGTTTG ATCG 5776 |||||||||| |||| CCCATGTTTG ATCG 734 hqPGS_C08HBa0336I24.1-_SGN-E318091+ (6509 5776) ******************************************************************************** EST sequence 208 +strand 727 n (File: SGN-E329018+) 1 CTACTCCTAA TACTCTTCCT TTATTATCCA CCAACAAATC CCTCTCTTCT CCCTTCACCA 61 ACAACCACTC TACTTTCTTA TCAAAACCCT CTCAACCTTT CCTCCATGGA AGGCGCTGTC 121 AAAGTTTCAA GGTTTCATGC AACGTTGGCG AGCATGACAA AAACCTTGAC GCTGTTGATA 181 GGAGAAATGT TCTTTTAGGG TTAGGAGGTT TTTATGGTGC AGCTAATCTT GCACCATTAG 241 CCTCTGCTGC TCCTATACCA CCACCTGATC TCAAATCTTG TGGTGTTGCC CATATAGATG 301 ATAAAGGTAC TGAAGTCTCA TACAGTTGTT GCCCTCCTGT ACCTGATGAT ATCGATAGCG 361 TTCCGTACTA CAAGTTCCCT CCTATGACGA AACTCCGCAT CCGCCCCCCT GCTCATGCGG 421 CGGATGAGGA GTACGTAGCC AAGTATCAAT TGGCTACAAG TCGAATGAGG GAACTTGATA 481 AAGACCCTTT TGACCCTCTT GGGTTTAAAC AACAAGCTAA TATTCATTGT GCTTATTGTA 541 ACGGTGCTTA TNAAATTGGT GGTAAAGAAT TGCAAGTTCA TTTCTCGTGG CTTTTCTTTC 601 CGTTCCATAG ATGGTACTTG TACTTTTACG AAAGGATATT GGGGTCACTT ATTAATGATC 661 CAACTTTTGC TTTACCTTAC TGGAATTGGG ATCATCAAAA GGTATGCGTA TACCTCCCAT 721 GTTTGAT Predicted gene structure (within gDNA segment 7105 to 5168): Exon 1 6505 5778 ( 728 n); cDNA 1 727 ( 727 n); score: 0.997 MATCH C08HBa0336I24.1- SGN-E329018+ 0.997 728 1.001 C PGS_C08HBa0336I24.1-_SGN-E329018+ (6505 5778) Alignment (genomic DNA sequence = upper lines): CTACTCCTAA TACTCTTCCT TTATTATCCA CCAACAAATC CCTCTCTTCT CCCTTCACCA 6446 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTACTCCTAA TACTCTTCCT TTATTATCCA CCAACAAATC CCTCTCTTCT CCCTTCACCA 60 ACAACCACTC TACTTTCTTA TCAAAACCCT CTCAACCTTT CCTCCATGGA AGGCGCTGTC 6386 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAACCACTC TACTTTCTTA TCAAAACCCT CTCAACCTTT CCTCCATGGA AGGCGCTGTC 120 AAAGTTTCAA GGTTTCATGC AACGTTGGCG AGCATGACAA AAACCTTGAC GCTGTTGATA 6326 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGTTTCAA GGTTTCATGC AACGTTGGCG AGCATGACAA AAACCTTGAC GCTGTTGATA 180 GGAGAAATGT TCTTTTAGGG TTAGGAGGTT TTTATGGTGC AGCTAATCTT GCACCATTAG 6266 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAGAAATGT TCTTTTAGGG TTAGGAGGTT TTTATGGTGC AGCTAATCTT GCACCATTAG 240 CCTCTGCTGC TCCTATACCA CCACCTGATC TCAAATCTTG TGGTGTTGCC CATATAGATG 6206 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCTGCTGC TCCTATACCA CCACCTGATC TCAAATCTTG TGGTGTTGCC CATATAGATG 300 ATAAAGGTAC TGAAGTCTCA TACAGTTGTT GCCCTCCTGT ACCTGATGAT ATCGATAGCG 6146 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAAAGGTAC TGAAGTCTCA TACAGTTGTT GCCCTCCTGT ACCTGATGAT ATCGATAGCG 360 TTCCGTACTA CAAGTTCCCT CCTATGACGA AACTCCGCAT CCGCCCCCCT GCTCATGCGG 6086 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCGTACTA CAAGTTCCCT CCTATGACGA AACTCCGCAT CCGCCCCCCT GCTCATGCGG 420 CGGATGAGGA GTACGTAGCC AAGTATCAAT TGGCTACAAG TCGAATGAGG GAACTTGATA 6026 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGATGAGGA GTACGTAGCC AAGTATCAAT TGGCTACAAG TCGAATGAGG GAACTTGATA 480 AAGACCCTTT TGACCCTCTT GGGTTTAAAC AACAAGCTAA TATTCATTGT GCTTATTGTA 5966 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGACCCTTT TGACCCTCTT GGGTTTAAAC AACAAGCTAA TATTCATTGT GCTTATTGTA 540 ACGGTGCTTA TAAAATTGGT GGTAAAGAAT TGCAAGTTCA TTTCTCGTGG CTTTTCTTTC 5906 |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACGGTGCTTA TNAAATTGGT GGTAAAGAAT TGCAAGTTCA TTTCTCGTGG CTTTTCTTTC 600 CGTTCCATAG ATGGTACTTG TACTTTTACG AAAGGATATT GGGGTCACTT ATTAATGATC 5846 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTCCATAG ATGGTACTTG TACTTTTACG AAAGGATATT GGGGTCACTT ATTAATGATC 660 CAACTTTTGC TTTACCTTAC TGGAATTGGG ATCATCCAAA AGGTATGCGT ATACCTCCCA 5786 |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| CAACTTTTGC TTTACCTTAC TGGAATTGGG ATCAT-CAAA AGGTATGCGT ATACCTCCCA 719 TGTTTGAT 5778 |||||||| TGTTTGAT 727 hqPGS_C08HBa0336I24.1-_SGN-E329018+ (6505 5778) ******************************************************************************** EST sequence 150 +strand 720 n (File: SGN-E316433+) 1 ATTACTACTA CTCTTCCTTT ATGCACCAAC AAATCCCTCT CTTCTTCCTT CACCACCACC 61 AACTCATCCT TGTTATCAAA ACCCTCTCAA CTTTTCCTCC ACGGAAGGCG TAATCAAAGT 121 TTCAAGGTTT CATGCAACGC AAACAACGTT GACAAAAACC CTGACGCTGT TGATAGACGA 181 AACGTTCTTT TAGGGTTAGG AGGTCTTTAT GGTGCAGCTA ATCTTGCACC ATTAGCGACT 241 GCTGCACCTA TACCACCTCC TGATCTCAAG TCTTGTGGTA CTGCCCATGT AAAAGAAGGT 301 GTTGATGTAA TATACAGTTG TTGCCCTCCT GTACCCGATG ATATCGATAG TGTTCCGTAC 361 TACAAGTTCC CTTCTATGAC TAAACTCCGC ATCCGCCCCC CTGCTCATGC GGCGGATGAG 421 GAGTACGTAG CCAAGTATCA ATTGGCTACG AGTCGAATGA GGGAACTTGA TAAAGACCCC 481 TTTGACCCTC TTGGCTTTAA ACAACAAGCT AATATTCATT GTGCTTATTG CAACGGTGCT 541 TACAAAGTTG GTGGTAAAGA ATTGCAAGTT CATTTCTCGT GGCTTTTCTT TCCCTTTCAT 601 AGATGGTACT TGTACTTTTA CGAAAGAATT TTGGGATCAC TTATTAATGA TCCAACTTTT 661 GCTTTACCTT ACTGGGATTG GGATCATCCA AAAGGCATGC GTATACCTCC CATGTTTGAT Predicted gene structure (within gDNA segment 8747 to 5168): Exon 1 6499 5778 ( 722 n); cDNA 5 720 ( 716 n); score: 0.907 MATCH C08HBa0336I24.1- SGN-E316433+ 0.907 722 1.003 C PGS_C08HBa0336I24.1-_SGN-E316433+ (6499 5778) Alignment (genomic DNA sequence = upper lines): CTAATACTCT TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTCCCTTC ACCAACAACC 6440 ||| |||||| |||| | || | |||||||| |||||||||| |||| ||||| |||| || | CTACTACTCT TCCT-T--TA TGCACCAACA AATCCCTCTC TTCTTCCTTC ACCACCACCA 61 ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC TGTCAAAGTT 6380 |||| | || ||||||||| |||||||||| ||||||||| |||||||| |||||||| ACTCATCCTT GTTATCAAAA CCCTCTCAAC TTTTCCTCCA CGGAAGGCGT AATCAAAGTT 121 TCAAGGTTTC ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT GATAGGAGAA 6320 |||||||||| |||||||| | | || ||||||||| |||||||||| ||||| ||| TCAAGGTTTC ATGCAACGCA AACAACGTTG ACAAAAACCC TGACGCTGTT GATAGACGAA 181 ATGTTCTTTT AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA TTAGCCTCTG 6260 | |||||||| |||||||||| ||| |||||| |||||||||| |||||||||| ||||| ||| ACGTTCTTTT AGGGTTAGGA GGTCTTTATG GTGCAGCTAA TCTTGCACCA TTAGCGACTG 241 CTGCTCCTAT ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA GATGATAAAG 6200 |||| ||||| |||||| ||| |||||||| | |||||||| ||||||| || | | ||| CTGCACCTAT ACCACCTCCT GATCTCAAGT CTTGTGGTAC TGCCCATGTA -A--AAGAAG 298 GTACTGAAGT CTCATACAGT TGTTGCCCTC CTGTACCTGA TGATATCGAT AGCGTTCCGT 6140 || ||| || ||||||| |||||||||| ||||||| || |||||||||| || ||||||| GTGTTGATGT AATATACAGT TGTTGCCCTC CTGTACCCGA TGATATCGAT AGTGTTCCGT 358 ACTACAAGTT CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT GCGGCGGATG 6080 |||||||||| |||| ||||| || ||||||| |||||||||| |||||||||| |||||||||| ACTACAAGTT CCCTTCTATG ACTAAACTCC GCATCCGCCC CCCTGCTCAT GCGGCGGATG 418 AGGAGTACGT AGCCAAGTAT CAATTGGCTA CAAGTCGAAT GAGGGAACTT GATAAAGACC 6020 |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| AGGAGTACGT AGCCAAGTAT CAATTGGCTA CGAGTCGAAT GAGGGAACTT GATAAAGACC 478 CTTTTGACCC TCTTGGGTTT AAACAACAAG CTAATATTCA TTGTGCTTAT TGTAACGGTG 5960 | |||||||| |||||| ||| |||||||||| |||||||||| |||||||||| || ||||||| CCTTTGACCC TCTTGGCTTT AAACAACAAG CTAATATTCA TTGTGCTTAT TGCAACGGTG 538 CTTATAAAAT TGGTGGTAAA GAATTGCAAG TTCATTTCTC GTGGCTTTTC TTTCCGTTCC 5900 |||| ||| | |||||||||| |||||||||| |||||||||| |||||||||| ||||| || | CTTACAAAGT TGGTGGTAAA GAATTGCAAG TTCATTTCTC GTGGCTTTTC TTTCCCTTTC 598 ATAGATGGTA CTTGTACTTT TACGAAAGGA TATTGGGGTC ACTTATTAAT GATCCAACTT 5840 |||||||||| |||||||||| |||||||| | | ||||| || |||||||||| |||||||||| ATAGATGGTA CTTGTACTTT TACGAAAGAA TTTTGGGATC ACTTATTAAT GATCCAACTT 658 TTGCTTTACC TTACTGGAAT TGGGATCATC CAAAAGGTAT GCGTATACCT CCCATGTTTG 5780 |||||||||| ||||||| || |||||||||| ||||||| || |||||||||| |||||||||| TTGCTTTACC TTACTGGGAT TGGGATCATC CAAAAGGCAT GCGTATACCT CCCATGTTTG 718 AT 5778 || AT 720 hqPGS_C08HBa0336I24.1-_SGN-E316433+ (6499 5778) ******************************************************************************** EST sequence 227 +strand 714 n (File: SGN-E314991+) 1 TCCTAATACT CTTCCTTTAT TATCCACCAA CAAATCCCTC TCTTCTCCCT TCACCAACAA 61 CCACTCTACT TTCTTATCAA AACCCTCTCA ACCTTTCCTC CATGGAAGGC GCTGTCAAAG 121 TTTCAAGGTT TCATGCAACG TTGGCGAGCA TGACAAAAAC CTTGACGCTG TTGATAGGAG 181 AAATGTTCTT TTAGGGTTAG GAGGTTTTTA TGGTGCAGCT AATCTTGCAC CATTAGCCTC 241 TGCTGCTCCT ATACCACCAC CTGATCTCAA ATCTTGTGGT GTTGCCCATA TAGATGATAA 301 AGGTACTGAA GTCTCATACA GTTGTTGCCC TCCTGTACCT GATGATATCG ATAGCGTTCC 361 GTACTACAAG TTCCCTCCTA TGACGAAACT CCGCATCCGC CCCCCTGCTC ATGCGGCGGA 421 TGAGGAGTAC GTAGCCAAGT ATCAATTGGC TACAAGTCGA ATGAGGGAAC TTGATAAAGA 481 CCCTTTTGAC CCTCTTGGGT TTAAACAACA AGCTAATATT CATTGTGCTT ATTGTAACGG 541 TGCTTATAAA ATTGGTGGTA AAGAATTGCA AGTTCATTTC TCGTGGCTTT TCTTTCCGTT 601 CCATAGATGG TACTTGTACT TTTACGAAAG GATATTGNNG TCACTTATTA ATGATCCAAC 661 TTTTGCTTTA CCTTACTGGG ATTGGGATCA TCCAAAAAGT ATGCGTATAC CTCC Predicted gene structure (within gDNA segment 7101 to 5178): Exon 1 6501 5788 ( 714 n); cDNA 1 714 ( 714 n); score: 0.994 MATCH C08HBa0336I24.1- SGN-E314991+ 0.994 714 1.000 C PGS_C08HBa0336I24.1-_SGN-E314991+ (6501 5788) Alignment (genomic DNA sequence = upper lines): TCCTAATACT CTTCCTTTAT TATCCACCAA CAAATCCCTC TCTTCTCCCT TCACCAACAA 6442 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTAATACT CTTCCTTTAT TATCCACCAA CAAATCCCTC TCTTCTCCCT TCACCAACAA 60 CCACTCTACT TTCTTATCAA AACCCTCTCA ACCTTTCCTC CATGGAAGGC GCTGTCAAAG 6382 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCACTCTACT TTCTTATCAA AACCCTCTCA ACCTTTCCTC CATGGAAGGC GCTGTCAAAG 120 TTTCAAGGTT TCATGCAACG TTGGCGAGCA TGACAAAAAC CTTGACGCTG TTGATAGGAG 6322 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCAAGGTT TCATGCAACG TTGGCGAGCA TGACAAAAAC CTTGACGCTG TTGATAGGAG 180 AAATGTTCTT TTAGGGTTAG GAGGTTTTTA TGGTGCAGCT AATCTTGCAC CATTAGCCTC 6262 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATGTTCTT TTAGGGTTAG GAGGTTTTTA TGGTGCAGCT AATCTTGCAC CATTAGCCTC 240 TGCTGCTCCT ATACCACCAC CTGATCTCAA ATCTTGTGGT GTTGCCCATA TAGATGATAA 6202 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCTGCTCCT ATACCACCAC CTGATCTCAA ATCTTGTGGT GTTGCCCATA TAGATGATAA 300 AGGTACTGAA GTCTCATACA GTTGTTGCCC TCCTGTACCT GATGATATCG ATAGCGTTCC 6142 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGTACTGAA GTCTCATACA GTTGTTGCCC TCCTGTACCT GATGATATCG ATAGCGTTCC 360 GTACTACAAG TTCCCTCCTA TGACGAAACT CCGCATCCGC CCCCCTGCTC ATGCGGCGGA 6082 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTACTACAAG TTCCCTCCTA TGACGAAACT CCGCATCCGC CCCCCTGCTC ATGCGGCGGA 420 TGAGGAGTAC GTAGCCAAGT ATCAATTGGC TACAAGTCGA ATGAGGGAAC TTGATAAAGA 6022 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAGGAGTAC GTAGCCAAGT ATCAATTGGC TACAAGTCGA ATGAGGGAAC TTGATAAAGA 480 CCCTTTTGAC CCTCTTGGGT TTAAACAACA AGCTAATATT CATTGTGCTT ATTGTAACGG 5962 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCTTTTGAC CCTCTTGGGT TTAAACAACA AGCTAATATT CATTGTGCTT ATTGTAACGG 540 TGCTTATAAA ATTGGTGGTA AAGAATTGCA AGTTCATTTC TCGTGGCTTT TCTTTCCGTT 5902 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCTTATAAA ATTGGTGGTA AAGAATTGCA AGTTCATTTC TCGTGGCTTT TCTTTCCGTT 600 CCATAGATGG TACTTGTACT TTTACGAAAG GATATTGGGG TCACTTATTA ATGATCCAAC 5842 |||||||||| |||||||||| |||||||||| ||||||| | |||||||||| |||||||||| CCATAGATGG TACTTGTACT TTTACGAAAG GATATTGNNG TCACTTATTA ATGATCCAAC 660 TTTTGCTTTA CCTTACTGGA ATTGGGATCA TCCAAAAGGT ATGCGTATAC CTCC 5788 |||||||||| ||||||||| |||||||||| ||||||| || |||||||||| |||| TTTTGCTTTA CCTTACTGGG ATTGGGATCA TCCAAAAAGT ATGCGTATAC CTCC 714 hqPGS_C08HBa0336I24.1-_SGN-E314991+ (6501 5788) ******************************************************************************** EST sequence 164 +strand 722 n (File: SGN-E339959+) 1 TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 61 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 121 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 181 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 241 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 301 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 361 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 421 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 481 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 541 TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 601 TTCTTTCCGT TCCATAGATG GTACTTGTAC TTTTACGAAA GGATATTTGG GTCACTTATT 661 AATGATCCAA CTTTTGCTTT ACCTTACTGG AATTGGGATC ATCCAAAAGG TATGCGTATA 721 CC Predicted gene structure (within gDNA segment 7112 to 5181): Exon 1 6512 5791 ( 722 n); cDNA 1 722 ( 722 n); score: 0.999 MATCH C08HBa0336I24.1- SGN-E339959+ 0.999 722 1.000 C PGS_C08HBa0336I24.1-_SGN-E339959+ (6512 5791) Alignment (genomic DNA sequence = upper lines): TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 6453 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 60 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 6393 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 120 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 6333 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 180 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 6273 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 240 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 6213 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 300 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 6153 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 360 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 6093 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 420 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 6033 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 480 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 5973 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 540 TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 5913 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 600 TTCTTTCCGT TCCATAGATG GTACTTGTAC TTTTACGAAA GGATATTGGG GTCACTTATT 5853 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| TTCTTTCCGT TCCATAGATG GTACTTGTAC TTTTACGAAA GGATATTTGG GTCACTTATT 660 AATGATCCAA CTTTTGCTTT ACCTTACTGG AATTGGGATC ATCCAAAAGG TATGCGTATA 5793 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGATCCAA CTTTTGCTTT ACCTTACTGG AATTGGGATC ATCCAAAAGG TATGCGTATA 720 CC 5791 || CC 722 hqPGS_C08HBa0336I24.1-_SGN-E339959+ (6512 5791) ******************************************************************************** EST sequence 220 +strand 719 n (File: SGN-E317913+) 1 TTCTTCTACT CCTAATACTC TTCCTTTATT ATCCACCAAC AAATCCCTCT CTTCTCCCTT 61 CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA CCTTTCCTCC ATGGAAGGCG 121 CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT GACAAAAACC TTGACGCTGT 181 TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT GGTGCAGCTA ATCTTGCACC 241 ATTAGCCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA TCTTGTGGTG TTGCCCATAT 301 AGATGATAAA GGTACTGAAG TCTCATACAG TTGTTGCCCT CCTGTACCTG ATGATATCGA 361 TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC CGCATCCGCC CCCCTGCTCA 421 TGCGGCGGAT GAGGAGTACG TAGCCAAGTA TCAATTGGCT ACAAGTCGAA TGAGGGAACT 481 TGATAAAGAC CCTTTTGACC CTCTTGGGTT TAAACAACAA GCTAATATTC ATTGTGCTTA 541 TTGTAACGGT GCTTATAAAA TTGGTGGTAA AGAATTGCAA GTTCATTTCT CGTGGCTTTT 601 CTTTCCGTTC CATAGATGGT ACTTGTACTT TTACGAAAGG ATATTGGGGT CACTTATTAA 661 TGATCCAACT TTTGCTTTAC CTTACTGGGA TTGGGATCAT CCAAAAGGTA TGCGTATAC Predicted gene structure (within gDNA segment 7110 to 5182): Exon 1 6510 5792 ( 719 n); cDNA 1 719 ( 719 n); score: 0.999 MATCH C08HBa0336I24.1- SGN-E317913+ 0.999 719 1.000 C PGS_C08HBa0336I24.1-_SGN-E317913+ (6510 5792) Alignment (genomic DNA sequence = upper lines): TTCTTCTACT CCTAATACTC TTCCTTTATT ATCCACCAAC AAATCCCTCT CTTCTCCCTT 6451 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTCTACT CCTAATACTC TTCCTTTATT ATCCACCAAC AAATCCCTCT CTTCTCCCTT 60 CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA CCTTTCCTCC ATGGAAGGCG 6391 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA CCTTTCCTCC ATGGAAGGCG 120 CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT GACAAAAACC TTGACGCTGT 6331 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT GACAAAAACC TTGACGCTGT 180 TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT GGTGCAGCTA ATCTTGCACC 6271 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT GGTGCAGCTA ATCTTGCACC 240 ATTAGCCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA TCTTGTGGTG TTGCCCATAT 6211 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAGCCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA TCTTGTGGTG TTGCCCATAT 300 AGATGATAAA GGTACTGAAG TCTCATACAG TTGTTGCCCT CCTGTACCTG ATGATATCGA 6151 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATGATAAA GGTACTGAAG TCTCATACAG TTGTTGCCCT CCTGTACCTG ATGATATCGA 360 TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC CGCATCCGCC CCCCTGCTCA 6091 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC CGCATCCGCC CCCCTGCTCA 420 TGCGGCGGAT GAGGAGTACG TAGCCAAGTA TCAATTGGCT ACAAGTCGAA TGAGGGAACT 6031 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCGGCGGAT GAGGAGTACG TAGCCAAGTA TCAATTGGCT ACAAGTCGAA TGAGGGAACT 480 TGATAAAGAC CCTTTTGACC CTCTTGGGTT TAAACAACAA GCTAATATTC ATTGTGCTTA 5971 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATAAAGAC CCTTTTGACC CTCTTGGGTT TAAACAACAA GCTAATATTC ATTGTGCTTA 540 TTGTAACGGT GCTTATAAAA TTGGTGGTAA AGAATTGCAA GTTCATTTCT CGTGGCTTTT 5911 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTAACGGT GCTTATAAAA TTGGTGGTAA AGAATTGCAA GTTCATTTCT CGTGGCTTTT 600 CTTTCCGTTC CATAGATGGT ACTTGTACTT TTACGAAAGG ATATTGGGGT CACTTATTAA 5851 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTCCGTTC CATAGATGGT ACTTGTACTT TTACGAAAGG ATATTGGGGT CACTTATTAA 660 TGATCCAACT TTTGCTTTAC CTTACTGGAA TTGGGATCAT CCAAAAGGTA TGCGTATAC 5792 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| ||||||||| TGATCCAACT TTTGCTTTAC CTTACTGGGA TTGGGATCAT CCAAAAGGTA TGCGTATAC 719 hqPGS_C08HBa0336I24.1-_SGN-E317913+ (6510 5792) ******************************************************************************** EST sequence 105 +strand 720 n (File: SGN-E326071+) 1 CTTCTTCTAC TCCTAATACT CTTCCTTTAT TATCCACCAA CAAATCCCTC TCTTCTCCCT 61 TCACCAACAA CCACTCTACT TTCTTATCAA AACCCTCTCA ACCTTTCCTC CATGGAAGGC 121 GCTGTCAAAG TTTCAAGGTT TCATGCAACG TTGGCGAGCA TGACAAAAAC CTTGACGCTG 181 TTGATAGGAG AAATGTTCTT TTAGGGTTAG GAGGTTTTTA TGGTGCAGCT AATCTTGCAC 241 CATTAGCCTC TGCTGCTCCT ATACCACCAC CTGATCTCAA ATCTTGTGGT GTTGCCCATA 301 TAGATGATAA AGGTACTGAA GTCTCATACA GTTGTTGCCC TCCTGTACCT GATGATATCG 361 ATAGCGTTCC GTACTACAAG TTCCCTCCTA TGACGAAACT CCGCATCCGC CCCCCTGCTC 421 ATGCGGCGGA TGAGGAGTAC GTAGCCAAGT ATCAATTGGC TACAAGTCGA ATGAGGGAAC 481 TTGATAAAGA CCCTTTTGAC CCTCTTGGGT TTAAACAACA AGCTAATATT CATTGTGCTT 541 ATTGTAACGG TGCTTATAAA ATTGGTGGTA AAGAATTGCA AGTTCATTTC TCGTGGCTTT 601 TCTTTCCGTT CCATAGATGG TACTTGTACT TTTACGAAAG GATATTGGGG TCACTTATTA 661 ATGATCCAAC TTTTGCTTTA CCTTACTGGG AATTGGGATC ATCCAAAAGG TATGCGTATA Predicted gene structure (within gDNA segment 7111 to 5183): Exon 1 6511 5793 ( 719 n); cDNA 1 720 ( 720 n); score: 0.997 MATCH C08HBa0336I24.1- SGN-E326071+ 0.997 719 0.999 C PGS_C08HBa0336I24.1-_SGN-E326071+ (6511 5793) Alignment (genomic DNA sequence = upper lines): CTTCTTCTAC TCCTAATACT CTTCCTTTAT TATCCACCAA CAAATCCCTC TCTTCTCCCT 6452 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTCTTCTAC TCCTAATACT CTTCCTTTAT TATCCACCAA CAAATCCCTC TCTTCTCCCT 60 TCACCAACAA CCACTCTACT TTCTTATCAA AACCCTCTCA ACCTTTCCTC CATGGAAGGC 6392 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACCAACAA CCACTCTACT TTCTTATCAA AACCCTCTCA ACCTTTCCTC CATGGAAGGC 120 GCTGTCAAAG TTTCAAGGTT TCATGCAACG TTGGCGAGCA TGACAAAAAC CTTGACGCTG 6332 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTGTCAAAG TTTCAAGGTT TCATGCAACG TTGGCGAGCA TGACAAAAAC CTTGACGCTG 180 TTGATAGGAG AAATGTTCTT TTAGGGTTAG GAGGTTTTTA TGGTGCAGCT AATCTTGCAC 6272 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATAGGAG AAATGTTCTT TTAGGGTTAG GAGGTTTTTA TGGTGCAGCT AATCTTGCAC 240 CATTAGCCTC TGCTGCTCCT ATACCACCAC CTGATCTCAA ATCTTGTGGT GTTGCCCATA 6212 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTAGCCTC TGCTGCTCCT ATACCACCAC CTGATCTCAA ATCTTGTGGT GTTGCCCATA 300 TAGATGATAA AGGTACTGAA GTCTCATACA GTTGTTGCCC TCCTGTACCT GATGATATCG 6152 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGATGATAA AGGTACTGAA GTCTCATACA GTTGTTGCCC TCCTGTACCT GATGATATCG 360 ATAGCGTTCC GTACTACAAG TTCCCTCCTA TGACGAAACT CCGCATCCGC CCCCCTGCTC 6092 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGCGTTCC GTACTACAAG TTCCCTCCTA TGACGAAACT CCGCATCCGC CCCCCTGCTC 420 ATGCGGCGGA TGAGGAGTAC GTAGCCAAGT ATCAATTGGC TACAAGTCGA ATGAGGGAAC 6032 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGCGGCGGA TGAGGAGTAC GTAGCCAAGT ATCAATTGGC TACAAGTCGA ATGAGGGAAC 480 TTGATAAAGA CCCTTTTGAC CCTCTTGGGT TTAAACAACA AGCTAATATT CATTGTGCTT 5972 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATAAAGA CCCTTTTGAC CCTCTTGGGT TTAAACAACA AGCTAATATT CATTGTGCTT 540 ATTGTAACGG TGCTTATAAA ATTGGTGGTA AAGAATTGCA AGTTCATTTC TCGTGGCTTT 5912 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGTAACGG TGCTTATAAA ATTGGTGGTA AAGAATTGCA AGTTCATTTC TCGTGGCTTT 600 TCTTTCCGTT CCATAGATGG TACTTGTACT TTTACGAAAG GATATTGGGG TCACTTATTA 5852 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTTCCGTT CCATAGATGG TACTTGTACT TTTACGAAAG GATATTGGGG TCACTTATTA 660 ATGATCCAAC TTTTGCTTTA CCTTACT-GG AATTGGGATC ATCCAAAAGG TATGCGTATA 5793 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| ATGATCCAAC TTTTGCTTTA CCTTACTGGG AATTGGGATC ATCCAAAAGG TATGCGTATA 720 hqPGS_C08HBa0336I24.1-_SGN-E326071+ (6511 5793) ******************************************************************************** EST sequence 293 +strand 697 n (File: SGN-E320020+) 1 TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 61 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 121 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 181 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 241 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 301 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 361 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 421 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 481 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 541 TATTGTAACG GTGCTTATAA AATTGGTGGT NAAGAATTGC AAGTTCATTT CTCGTGGCTT 601 TTCTTTCCGT TCCATAGATG GTACTTGTAC TTTTACGAAA GGATATTGGG GTCACTTATT 661 AATGATCCAA CTTTTGCTTT ACCTTACTGG GATTGGG Predicted gene structure (within gDNA segment 7112 to 5143): Exon 1 6512 5816 ( 697 n); cDNA 1 697 ( 697 n); score: 0.997 MATCH C08HBa0336I24.1- SGN-E320020+ 0.997 697 1.000 C PGS_C08HBa0336I24.1-_SGN-E320020+ (6512 5816) Alignment (genomic DNA sequence = upper lines): TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 6453 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 60 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 6393 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 120 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 6333 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 180 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 6273 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 240 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 6213 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 300 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 6153 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 360 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 6093 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 420 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 6033 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 480 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 5973 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 540 TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 5913 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| TATTGTAACG GTGCTTATAA AATTGGTGGT NAAGAATTGC AAGTTCATTT CTCGTGGCTT 600 TTCTTTCCGT TCCATAGATG GTACTTGTAC TTTTACGAAA GGATATTGGG GTCACTTATT 5853 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTTCCGT TCCATAGATG GTACTTGTAC TTTTACGAAA GGATATTGGG GTCACTTATT 660 AATGATCCAA CTTTTGCTTT ACCTTACTGG AATTGGG 5816 |||||||||| |||||||||| |||||||||| |||||| AATGATCCAA CTTTTGCTTT ACCTTACTGG GATTGGG 697 hqPGS_C08HBa0336I24.1-_SGN-E320020+ (6512 5816) ******************************************************************************** EST sequence 124 +strand 658 n (File: SGN-E315584+) 1 AACAAATCCC TCTCTTCTCC CTTCACCAAC AACCACTCTA CTTTCTTATC AAAACCCTCT 61 CAACCTTTCC TCCATGGAAG GCGCTGTCAA AGTTTCAAGG TTTCATGCAA CGTTGGCGAG 121 CATGACAAAA ACCTTGACGC TGTTGATAGG AGAAATGTTC TTTTAGGGTT AGGAGGTTTT 181 TATGGTGCAG CTAATCTTGC ACCATTAGCC TCTGCTGCTC CTATACCACC ACCTGATCTC 241 AAATCTTGTG GTGTTGCCCA TATAGATGAT AAAGGTACTG AAGTCTCATA CAGTTGTTGC 301 CCTCCTGTAC CTGATGATAT CGATAGCGTT CCGTACTACA AGTTCCCTCC TATGACGAAA 361 CTCCGCATCC GCCCCCCTGC TCATGCGGCG GATGAGGAGT ACGTAGCCAA GTATCAATTG 421 GCTACAAGTC GAATGAGGGA ACTTGATAAA GACCCTTTTG ACCCTCTTGG GTTTAAACAA 481 CAAGCTAATA TTCATTGTGC TTATTGTAAC GGTGCTTATA AAATTGGTGG TAAAGAATTG 541 CAAGTTCATT TCTCGTGGCT TTTCTTTCCG TTCCATAGAT GGTACTTGTA CTTTTACGAA 601 AGGATATTGG GGTCACTTAT TAATGATCCA ACTTTTGCTT TACCTTACTG GAATTGGG Predicted gene structure (within gDNA segment 7073 to 5206): Exon 1 6473 5816 ( 658 n); cDNA 1 658 ( 658 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E315584+ 1.000 658 1.000 C PGS_C08HBa0336I24.1-_SGN-E315584+ (6473 5816) Alignment (genomic DNA sequence = upper lines): AACAAATCCC TCTCTTCTCC CTTCACCAAC AACCACTCTA CTTTCTTATC AAAACCCTCT 6414 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACAAATCCC TCTCTTCTCC CTTCACCAAC AACCACTCTA CTTTCTTATC AAAACCCTCT 60 CAACCTTTCC TCCATGGAAG GCGCTGTCAA AGTTTCAAGG TTTCATGCAA CGTTGGCGAG 6354 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACCTTTCC TCCATGGAAG GCGCTGTCAA AGTTTCAAGG TTTCATGCAA CGTTGGCGAG 120 CATGACAAAA ACCTTGACGC TGTTGATAGG AGAAATGTTC TTTTAGGGTT AGGAGGTTTT 6294 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGACAAAA ACCTTGACGC TGTTGATAGG AGAAATGTTC TTTTAGGGTT AGGAGGTTTT 180 TATGGTGCAG CTAATCTTGC ACCATTAGCC TCTGCTGCTC CTATACCACC ACCTGATCTC 6234 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATGGTGCAG CTAATCTTGC ACCATTAGCC TCTGCTGCTC CTATACCACC ACCTGATCTC 240 AAATCTTGTG GTGTTGCCCA TATAGATGAT AAAGGTACTG AAGTCTCATA CAGTTGTTGC 6174 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATCTTGTG GTGTTGCCCA TATAGATGAT AAAGGTACTG AAGTCTCATA CAGTTGTTGC 300 CCTCCTGTAC CTGATGATAT CGATAGCGTT CCGTACTACA AGTTCCCTCC TATGACGAAA 6114 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCCTGTAC CTGATGATAT CGATAGCGTT CCGTACTACA AGTTCCCTCC TATGACGAAA 360 CTCCGCATCC GCCCCCCTGC TCATGCGGCG GATGAGGAGT ACGTAGCCAA GTATCAATTG 6054 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCCGCATCC GCCCCCCTGC TCATGCGGCG GATGAGGAGT ACGTAGCCAA GTATCAATTG 420 GCTACAAGTC GAATGAGGGA ACTTGATAAA GACCCTTTTG ACCCTCTTGG GTTTAAACAA 5994 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTACAAGTC GAATGAGGGA ACTTGATAAA GACCCTTTTG ACCCTCTTGG GTTTAAACAA 480 CAAGCTAATA TTCATTGTGC TTATTGTAAC GGTGCTTATA AAATTGGTGG TAAAGAATTG 5934 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGCTAATA TTCATTGTGC TTATTGTAAC GGTGCTTATA AAATTGGTGG TAAAGAATTG 540 CAAGTTCATT TCTCGTGGCT TTTCTTTCCG TTCCATAGAT GGTACTTGTA CTTTTACGAA 5874 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGTTCATT TCTCGTGGCT TTTCTTTCCG TTCCATAGAT GGTACTTGTA CTTTTACGAA 600 AGGATATTGG GGTCACTTAT TAATGATCCA ACTTTTGCTT TACCTTACTG GAATTGGG 5816 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| AGGATATTGG GGTCACTTAT TAATGATCCA ACTTTTGCTT TACCTTACTG GAATTGGG 658 hqPGS_C08HBa0336I24.1-_SGN-E315584+ (6473 5816) ******************************************************************************** EST sequence 176 +strand 570 n (File: SGN-E316925+) 1 AAAGTTTCAA GGTTTCATGC AACGTTGGCG AGCATGACAA AAACCTTGAC GCTGTTGATA 61 GGAGAAATGT TCTTTTAGGG TTAGGAGGTT TTTATGGTGC AGCTAATCTT GCACCATTAG 121 CCTCTGCTGC TCCTATACCA CCACCTGATC TCAAATCTTG TGGTGTTGCC CATATAGATG 181 ATAAAGGTAC TGAAGTCTCA TACAGTTGTT GCCCTCCTGT ACCTGATGAT ATCGATAGCG 241 TTCCGTACTA CAAGTTCCCT CCTATGACGA AACTCCGCAT CCGCCCCCCT GCTCATGCGG 301 CGGATGAGGA GTACGTAGCC AAGTATCAAT TGGCTACAAG TCGAATGAGG GAACTTGATA 361 AAGACCCTTT TGACCCTCTT GGGTTTAAAC AACAAGCTAA TATTCATTGT GCTTATTGTA 421 ACGGTGCTTA TAAAATTGGT GGTAAAGAAT TGCAAGTTCA TTTCTCGTGG CTTTTCTTTC 481 CGGTCCATAG ATGGTACTTG TACTTTTACG AAAGGATATT GGGGTCACTT ATTAATGATC 541 CAACTTTTGC TTTACCTTAC TGGAATTGGG Predicted gene structure (within gDNA segment 6985 to 5206): Exon 1 6385 5816 ( 570 n); cDNA 1 570 ( 570 n); score: 0.998 MATCH C08HBa0336I24.1- SGN-E316925+ 0.998 570 1.000 C PGS_C08HBa0336I24.1-_SGN-E316925+ (6385 5816) Alignment (genomic DNA sequence = upper lines): AAAGTTTCAA GGTTTCATGC AACGTTGGCG AGCATGACAA AAACCTTGAC GCTGTTGATA 6326 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGTTTCAA GGTTTCATGC AACGTTGGCG AGCATGACAA AAACCTTGAC GCTGTTGATA 60 GGAGAAATGT TCTTTTAGGG TTAGGAGGTT TTTATGGTGC AGCTAATCTT GCACCATTAG 6266 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAGAAATGT TCTTTTAGGG TTAGGAGGTT TTTATGGTGC AGCTAATCTT GCACCATTAG 120 CCTCTGCTGC TCCTATACCA CCACCTGATC TCAAATCTTG TGGTGTTGCC CATATAGATG 6206 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCTGCTGC TCCTATACCA CCACCTGATC TCAAATCTTG TGGTGTTGCC CATATAGATG 180 ATAAAGGTAC TGAAGTCTCA TACAGTTGTT GCCCTCCTGT ACCTGATGAT ATCGATAGCG 6146 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAAAGGTAC TGAAGTCTCA TACAGTTGTT GCCCTCCTGT ACCTGATGAT ATCGATAGCG 240 TTCCGTACTA CAAGTTCCCT CCTATGACGA AACTCCGCAT CCGCCCCCCT GCTCATGCGG 6086 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCGTACTA CAAGTTCCCT CCTATGACGA AACTCCGCAT CCGCCCCCCT GCTCATGCGG 300 CGGATGAGGA GTACGTAGCC AAGTATCAAT TGGCTACAAG TCGAATGAGG GAACTTGATA 6026 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGATGAGGA GTACGTAGCC AAGTATCAAT TGGCTACAAG TCGAATGAGG GAACTTGATA 360 AAGACCCTTT TGACCCTCTT GGGTTTAAAC AACAAGCTAA TATTCATTGT GCTTATTGTA 5966 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGACCCTTT TGACCCTCTT GGGTTTAAAC AACAAGCTAA TATTCATTGT GCTTATTGTA 420 ACGGTGCTTA TAAAATTGGT GGTAAAGAAT TGCAAGTTCA TTTCTCGTGG CTTTTCTTTC 5906 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACGGTGCTTA TAAAATTGGT GGTAAAGAAT TGCAAGTTCA TTTCTCGTGG CTTTTCTTTC 480 CGTTCCATAG ATGGTACTTG TACTTTTACG AAAGGATATT GGGGTCACTT ATTAATGATC 5846 || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGTCCATAG ATGGTACTTG TACTTTTACG AAAGGATATT GGGGTCACTT ATTAATGATC 540 CAACTTTTGC TTTACCTTAC TGGAATTGGG 5816 |||||||||| |||||||||| |||||||||| CAACTTTTGC TTTACCTTAC TGGAATTGGG 570 hqPGS_C08HBa0336I24.1-_SGN-E316925+ (6385 5816) ******************************************************************************** EST sequence 194 +strand 628 n (File: SGN-E318205+) 1 ACCAACAACC ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC 61 TGTCAAAGTT TCAAGGTTTC ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT 121 GATAGGAGAA ATGTTCTTTT AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA 181 TTAGCCTCTG CTGCTCCTAT ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA 241 GATGATAAAG GTACTGAAGT CTCATACAGT TGTTGCCCTC CTGTACCTGA TGATATCGAT 301 AGCGTTCCGT ACTACAAGTT CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT 361 GCGGCGGATG AGGAGTACGT AGCCAAGTAT CAATTGGCTA CAAGTCGAAT GAGGGAACTT 421 GATAAAGACC CTTTTGACCC TCTTGGGTTT AAACAACAAG CTAATATTCA TTGTGCTTAT 481 TGTAACGGTG CTTATAAAAT TGGTGGTAAA GAATTGCAAG TTCATTTCTC GTGGCTTTTC 541 TTTCCGTTCC ATAGATGGTA CTTGTACTTT TACGAAAGGA TATTGGGGTC ACTTATTAAT 601 GATCCAACTT TTGCTTTACC TTACTGGA Predicted gene structure (within gDNA segment 7049 to 5212): Exon 1 6449 5822 ( 628 n); cDNA 1 628 ( 628 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E318205+ 1.000 628 1.000 C PGS_C08HBa0336I24.1-_SGN-E318205+ (6449 5822) Alignment (genomic DNA sequence = upper lines): ACCAACAACC ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC 6390 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAACAACC ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC 60 TGTCAAAGTT TCAAGGTTTC ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT 6330 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTCAAAGTT TCAAGGTTTC ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT 120 GATAGGAGAA ATGTTCTTTT AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA 6270 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAGGAGAA ATGTTCTTTT AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA 180 TTAGCCTCTG CTGCTCCTAT ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA 6210 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAGCCTCTG CTGCTCCTAT ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA 240 GATGATAAAG GTACTGAAGT CTCATACAGT TGTTGCCCTC CTGTACCTGA TGATATCGAT 6150 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGATAAAG GTACTGAAGT CTCATACAGT TGTTGCCCTC CTGTACCTGA TGATATCGAT 300 AGCGTTCCGT ACTACAAGTT CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT 6090 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCGTTCCGT ACTACAAGTT CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT 360 GCGGCGGATG AGGAGTACGT AGCCAAGTAT CAATTGGCTA CAAGTCGAAT GAGGGAACTT 6030 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGGCGGATG AGGAGTACGT AGCCAAGTAT CAATTGGCTA CAAGTCGAAT GAGGGAACTT 420 GATAAAGACC CTTTTGACCC TCTTGGGTTT AAACAACAAG CTAATATTCA TTGTGCTTAT 5970 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAAAGACC CTTTTGACCC TCTTGGGTTT AAACAACAAG CTAATATTCA TTGTGCTTAT 480 TGTAACGGTG CTTATAAAAT TGGTGGTAAA GAATTGCAAG TTCATTTCTC GTGGCTTTTC 5910 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTAACGGTG CTTATAAAAT TGGTGGTAAA GAATTGCAAG TTCATTTCTC GTGGCTTTTC 540 TTTCCGTTCC ATAGATGGTA CTTGTACTTT TACGAAAGGA TATTGGGGTC ACTTATTAAT 5850 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCCGTTCC ATAGATGGTA CTTGTACTTT TACGAAAGGA TATTGGGGTC ACTTATTAAT 600 GATCCAACTT TTGCTTTACC TTACTGGA 5822 |||||||||| |||||||||| |||||||| GATCCAACTT TTGCTTTACC TTACTGGA 628 hqPGS_C08HBa0336I24.1-_SGN-E318205+ (6449 5822) ******************************************************************************** EST sequence 79 +strand 689 n (File: SGN-E346609+) 1 TCTTCTTCTT CTTCTATTAC TACTACTCTT CCTTTATGCA CCAACAAATC CCTCTCTTCT 61 TCCTTCACCA CCACCAACTC ATCCTTGTTA TCAAAACCCT CTCAACTTTT CCTCCACGGA 121 AGGCGTAATC AAAGTTTCAA GGTTTCATGC AACGCAAACA ACGTTGACAA AAACCCTGAC 181 GCTGTTGATA GACGAAACGT TCTTTTAGGG TTAGGAGGTC TTTATGGTGC AGCTAATCTT 241 GCACCATTAG CGACTGCTGC ACCTATACCA CCTCCTGATC TCAAGTCTTG TGGTACTGCC 301 CATGTAAAAG AAGGTGTTGA TGTAATATAC AGTTGTTGCC CTCCTGTACC CGATGATATC 361 GATAGTGTTC CGTACTACAA GTTCCCTTCT ATGACTAAAC TCCGCATCCG CCCCCCTGCT 421 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACGAGTCG AATGAGGGAA 481 CTTGATAAAG ACCCCTTTGA CCCTCTTGGC TTTAAACAAC AAGCTAATAT TCATTGTGCT 541 TATTGCAACG GTGCTTACAA AGTTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 601 TTCTTTCCCT TCATAGATGG TACTTGTACT TTTACGAAAG AATTTTGGGA TCACTTATTA 661 ATGATCCAAC TTTTGCTTTA CCCTACTGG Predicted gene structure (within gDNA segment 8897 to 5150): Exon 1 6512 5823 ( 690 n); cDNA 4 689 ( 686 n); score: 0.896 MATCH C08HBa0336I24.1- SGN-E346609+ 0.896 690 1.001 C PGS_C08HBa0336I24.1-_SGN-E346609+ (6512 5823) Alignment (genomic DNA sequence = upper lines): TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 6453 ||||||||| || || ||| | || | |||| ||||| |||||||||| ||||||| || TCTTCTTCTT CTATTACTAC TACTCTTCCT TTATGCACCA ACAAATCCCT CTCTTCTTCC 63 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 6393 ||||||| || | |||| | || |||||| |||||||||| ||| |||||| ||| |||||| TTCACCACCA CCAACTCATC CTTGTTATCA AAACCCTCTC AACTTTTCCT CCACGGAAGG 123 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 6333 || ||||| |||||||||| |||||||||| | | | ||||||||| || ||||||| CGTAATCAAA GTTTCAAGGT TTCATGCAAC GCAAACAACG TTGACAAAAA CCCTGACGCT 183 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 6273 |||||||| |||| ||||| |||||||||| |||||| ||| |||||||||| |||||||||| GTTGATAGAC GAAACGTTCT TTTAGGGTTA GGAGGTCTTT ATGGTGCAGC TAATCTTGCA 243 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 6213 |||||||| ||||||| || ||||||||| |||||||||| | |||||||| | ||||||| CCATTAGCGA CTGCTGCACC TATACCACCT CCTGATCTCA AGTCTTGTGG TACTGCCCAT 303 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 6153 || | | ||||| ||| || |||| |||||||||| |||||||||| ||||||||| GTA-A--AAG AAGGTGTTGA TGTAATATAC AGTTGTTGCC CTCCTGTACC CGATGATATC 360 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 6093 ||||| |||| |||||||||| ||||||| || ||||| |||| |||||||||| |||||||||| GATAGTGTTC CGTACTACAA GTTCCCTTCT ATGACTAAAC TCCGCATCCG CCCCCCTGCT 420 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 6033 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACGAGTCG AATGAGGGAA 480 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 5973 |||||||||| |||| ||||| ||||||||| |||||||||| |||||||||| |||||||||| CTTGATAAAG ACCCCTTTGA CCCTCTTGGC TTTAAACAAC AAGCTAATAT TCATTGTGCT 540 TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 5913 ||||| |||| ||||||| || | |||||||| |||||||||| |||||||||| |||||||||| TATTGCAACG GTGCTTACAA AGTTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 600 TTCTTTCCGT TCCATAGATG GTACTTGTAC TTTTACGAAA GGATATTGGG GTCACTTATT 5853 |||||||| | | |||||||| |||||||||| |||||||||| | || ||||| ||||||||| TTCTTTCCCT T-CATAGATG GTACTTGTAC TTTTACGAAA GAATTTTGGG ATCACTTATT 659 AATGATCCAA CTTTTGCTTT ACCTTACTGG 5823 |||||||||| |||||||||| ||| |||||| AATGATCCAA CTTTTGCTTT ACCCTACTGG 689 hqPGS_C08HBa0336I24.1-_SGN-E346609+ (6512 5823) ******************************************************************************** EST sequence 107 +strand 689 n (File: SGN-E326119+) 1 TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 61 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 121 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 181 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 241 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 301 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 361 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 421 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 481 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 541 TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 601 TTCTTTCCTT TCCATAGATG GTACTTGTAC TTTTACGAAA GGATATTGGG GTCACTTATT 661 AATGATCCAA CTTTTGCTTT ACTTACTGG Predicted gene structure (within gDNA segment 7112 to 5151): Exon 1 6512 5823 ( 690 n); cDNA 1 689 ( 689 n); score: 0.997 MATCH C08HBa0336I24.1- SGN-E326119+ 0.997 690 1.001 C PGS_C08HBa0336I24.1-_SGN-E326119+ (6512 5823) Alignment (genomic DNA sequence = upper lines): TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 6453 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 60 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 6393 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 120 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 6333 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 180 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 6273 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 240 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 6213 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 300 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 6153 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 360 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 6093 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 420 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 6033 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 480 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 5973 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 540 TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 5913 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 600 TTCTTTCCGT TCCATAGATG GTACTTGTAC TTTTACGAAA GGATATTGGG GTCACTTATT 5853 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTTCCTT TCCATAGATG GTACTTGTAC TTTTACGAAA GGATATTGGG GTCACTTATT 660 AATGATCCAA CTTTTGCTTT ACCTTACTGG 5823 |||||||||| |||||||||| | |||||||| AATGATCCAA CTTTTGCTTT A-CTTACTGG 689 hqPGS_C08HBa0336I24.1-_SGN-E326119+ (6512 5823) ******************************************************************************** EST sequence 312 +strand 690 n (File: SGN-E343367+) 1 TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 61 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 121 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 181 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 241 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 301 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 361 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 421 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 481 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 541 TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 601 TTCTTTCCGT TCCATAGATG GTACTTGTAC TTTTACGAAA GGATATTGGG GTCACTTATT 661 AATGATCCAA CTTTTGCTTT ACCTTACTGG Predicted gene structure (within gDNA segment 7112 to 5213): Exon 1 6512 5823 ( 690 n); cDNA 1 690 ( 690 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E343367+ 1.000 690 1.000 C PGS_C08HBa0336I24.1-_SGN-E343367+ (6512 5823) Alignment (genomic DNA sequence = upper lines): TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 6453 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 60 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 6393 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 120 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 6333 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 180 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 6273 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 240 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 6213 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 300 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 6153 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 360 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 6093 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 420 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 6033 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 480 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 5973 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 540 TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 5913 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 600 TTCTTTCCGT TCCATAGATG GTACTTGTAC TTTTACGAAA GGATATTGGG GTCACTTATT 5853 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTTCCGT TCCATAGATG GTACTTGTAC TTTTACGAAA GGATATTGGG GTCACTTATT 660 AATGATCCAA CTTTTGCTTT ACCTTACTGG 5823 |||||||||| |||||||||| |||||||||| AATGATCCAA CTTTTGCTTT ACCTTACTGG 690 hqPGS_C08HBa0336I24.1-_SGN-E343367+ (6512 5823) ******************************************************************************** EST sequence 174 +strand 689 n (File: SGN-E317091+) 1 CTTCTTCTAC TCCTAATACT CTTCCTTTAT TATCCACCAA CAAATCCCTC TCTTCTCCCT 61 TCACCAACAA CCACTCTACT TTCTTATCAA AACCCTCTCA ACCTTTCCTC CATGGAAGGC 121 GCTGTCAAAG TTTCAAGGTT TCATGCAACG TTGGCGAGCA TGACAAAAAC CTTGACGCTG 181 TTGATAGGAG AAATGTTCTT TTAGGGTTAG GAGGTTTTTA TGGTGCAGCT AATCTTGCAC 241 CATTAGCCTC TGCTGCTCCT ATACCACCAC CTGATCTCAA ATCTTGTGGT GTTGCCCATA 301 TAGATGATAA AGGTACTGAA GTCTCATACA GTTGTTGCCC TCCTGTACCT GATGATATCG 361 ATAGCGTTCC GTACTACAAG TTCCCTCCTA TGACGAAACT CCGCATCCGC CCCCCTGCTC 421 ATGCGGCGGA TGAGGAGTAC GTAGCCAAGT ATCAATTGGC TACAAGTCGA ATGAGGGAAC 481 TTGATAAAGA CCCTTTTGAC CCTCTTGGGT TTAAACAACA AGCTAATATT CATTGTGCTT 541 ATTGTAACGG TGCTTATAAA ATTGGTGGTA AAGAATTGCA AGTTCATTTC TCGTGGCTTT 601 TCTTTCCGTT CCATAGATGG TACTTGTACT TTTACGAAAG GATATTGGGG TCACTTATTA 661 ATGATCCAAC TTTTGCTTTA CCTTACTGG Predicted gene structure (within gDNA segment 7111 to 5213): Exon 1 6511 5823 ( 689 n); cDNA 1 689 ( 689 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E317091+ 1.000 689 1.000 C PGS_C08HBa0336I24.1-_SGN-E317091+ (6511 5823) Alignment (genomic DNA sequence = upper lines): CTTCTTCTAC TCCTAATACT CTTCCTTTAT TATCCACCAA CAAATCCCTC TCTTCTCCCT 6452 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTCTTCTAC TCCTAATACT CTTCCTTTAT TATCCACCAA CAAATCCCTC TCTTCTCCCT 60 TCACCAACAA CCACTCTACT TTCTTATCAA AACCCTCTCA ACCTTTCCTC CATGGAAGGC 6392 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACCAACAA CCACTCTACT TTCTTATCAA AACCCTCTCA ACCTTTCCTC CATGGAAGGC 120 GCTGTCAAAG TTTCAAGGTT TCATGCAACG TTGGCGAGCA TGACAAAAAC CTTGACGCTG 6332 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTGTCAAAG TTTCAAGGTT TCATGCAACG TTGGCGAGCA TGACAAAAAC CTTGACGCTG 180 TTGATAGGAG AAATGTTCTT TTAGGGTTAG GAGGTTTTTA TGGTGCAGCT AATCTTGCAC 6272 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATAGGAG AAATGTTCTT TTAGGGTTAG GAGGTTTTTA TGGTGCAGCT AATCTTGCAC 240 CATTAGCCTC TGCTGCTCCT ATACCACCAC CTGATCTCAA ATCTTGTGGT GTTGCCCATA 6212 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTAGCCTC TGCTGCTCCT ATACCACCAC CTGATCTCAA ATCTTGTGGT GTTGCCCATA 300 TAGATGATAA AGGTACTGAA GTCTCATACA GTTGTTGCCC TCCTGTACCT GATGATATCG 6152 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGATGATAA AGGTACTGAA GTCTCATACA GTTGTTGCCC TCCTGTACCT GATGATATCG 360 ATAGCGTTCC GTACTACAAG TTCCCTCCTA TGACGAAACT CCGCATCCGC CCCCCTGCTC 6092 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGCGTTCC GTACTACAAG TTCCCTCCTA TGACGAAACT CCGCATCCGC CCCCCTGCTC 420 ATGCGGCGGA TGAGGAGTAC GTAGCCAAGT ATCAATTGGC TACAAGTCGA ATGAGGGAAC 6032 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGCGGCGGA TGAGGAGTAC GTAGCCAAGT ATCAATTGGC TACAAGTCGA ATGAGGGAAC 480 TTGATAAAGA CCCTTTTGAC CCTCTTGGGT TTAAACAACA AGCTAATATT CATTGTGCTT 5972 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATAAAGA CCCTTTTGAC CCTCTTGGGT TTAAACAACA AGCTAATATT CATTGTGCTT 540 ATTGTAACGG TGCTTATAAA ATTGGTGGTA AAGAATTGCA AGTTCATTTC TCGTGGCTTT 5912 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGTAACGG TGCTTATAAA ATTGGTGGTA AAGAATTGCA AGTTCATTTC TCGTGGCTTT 600 TCTTTCCGTT CCATAGATGG TACTTGTACT TTTACGAAAG GATATTGGGG TCACTTATTA 5852 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTTCCGTT CCATAGATGG TACTTGTACT TTTACGAAAG GATATTGGGG TCACTTATTA 660 ATGATCCAAC TTTTGCTTTA CCTTACTGG 5823 |||||||||| |||||||||| ||||||||| ATGATCCAAC TTTTGCTTTA CCTTACTGG 689 hqPGS_C08HBa0336I24.1-_SGN-E317091+ (6511 5823) ******************************************************************************** EST sequence 192 +strand 690 n (File: SGN-E317449+) 1 TTCTTCTACT CCTAATACTC TTCCTTTATT ATCCACCAAC AAATCCCTCT CTTCTCCCTT 61 CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA CCTTTCCTCC ATGGAAGGCG 121 CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT GACAAAAACC TTGACGCTGT 181 TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT GGTGCAGCTA ATCTTGCACC 241 ATTAGCCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA TCTTGTGGTG TTGCCCATAT 301 AGATGATAAA GGTACTGAAG TCTCATACAG TTGTTGCCCT CCTGTACCTG ATGATATCGA 361 TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC CGCATCCGCC CCCCTGCTCA 421 TGCGGCGGAT GAGGAGTACG TAGCCAAGTA TCAATTGGCT ACAAGTCGAA TGAGGGAACT 481 TGATAAAGAC CCTTTTGACC CTCTTGGGTT TAAACAACAA GCTAATATTC ATTGTGCTTA 541 TTGTAACGGT GCTTATAAAA TTGGTGGTAA AGAATTGCAA GTTCATTTCT CGTGGCTTTT 601 CTTTCCGTTT CATAGATGGT ACTTGTACTT TTACGAAAGG ATATTGGGGT CACTTATTAA 661 TGATCCAACT TTTGCTTTAC CTTACTGGGA Predicted gene structure (within gDNA segment 7110 to 5193): Exon 1 6510 5823 ( 688 n); cDNA 1 688 ( 688 n); score: 0.999 MATCH C08HBa0336I24.1- SGN-E317449+ 0.999 688 0.997 C PGS_C08HBa0336I24.1-_SGN-E317449+ (6510 5823) Alignment (genomic DNA sequence = upper lines): TTCTTCTACT CCTAATACTC TTCCTTTATT ATCCACCAAC AAATCCCTCT CTTCTCCCTT 6451 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTCTACT CCTAATACTC TTCCTTTATT ATCCACCAAC AAATCCCTCT CTTCTCCCTT 60 CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA CCTTTCCTCC ATGGAAGGCG 6391 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA CCTTTCCTCC ATGGAAGGCG 120 CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT GACAAAAACC TTGACGCTGT 6331 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT GACAAAAACC TTGACGCTGT 180 TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT GGTGCAGCTA ATCTTGCACC 6271 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT GGTGCAGCTA ATCTTGCACC 240 ATTAGCCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA TCTTGTGGTG TTGCCCATAT 6211 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAGCCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA TCTTGTGGTG TTGCCCATAT 300 AGATGATAAA GGTACTGAAG TCTCATACAG TTGTTGCCCT CCTGTACCTG ATGATATCGA 6151 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATGATAAA GGTACTGAAG TCTCATACAG TTGTTGCCCT CCTGTACCTG ATGATATCGA 360 TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC CGCATCCGCC CCCCTGCTCA 6091 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC CGCATCCGCC CCCCTGCTCA 420 TGCGGCGGAT GAGGAGTACG TAGCCAAGTA TCAATTGGCT ACAAGTCGAA TGAGGGAACT 6031 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCGGCGGAT GAGGAGTACG TAGCCAAGTA TCAATTGGCT ACAAGTCGAA TGAGGGAACT 480 TGATAAAGAC CCTTTTGACC CTCTTGGGTT TAAACAACAA GCTAATATTC ATTGTGCTTA 5971 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATAAAGAC CCTTTTGACC CTCTTGGGTT TAAACAACAA GCTAATATTC ATTGTGCTTA 540 TTGTAACGGT GCTTATAAAA TTGGTGGTAA AGAATTGCAA GTTCATTTCT CGTGGCTTTT 5911 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTAACGGT GCTTATAAAA TTGGTGGTAA AGAATTGCAA GTTCATTTCT CGTGGCTTTT 600 CTTTCCGTTC CATAGATGGT ACTTGTACTT TTACGAAAGG ATATTGGGGT CACTTATTAA 5851 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTCCGTTT CATAGATGGT ACTTGTACTT TTACGAAAGG ATATTGGGGT CACTTATTAA 660 TGATCCAACT TTTGCTTTAC CTTACTGG 5823 |||||||||| |||||||||| |||||||| TGATCCAACT TTTGCTTTAC CTTACTGG 688 hqPGS_C08HBa0336I24.1-_SGN-E317449+ (6510 5823) ******************************************************************************** EST sequence 205 +strand 675 n (File: SGN-E318179+) 1 GCTACTACTC TTCCTTTATG CACCAACAAA TCCCTCTCTT CTTCCTTCAC CACCACCAAC 61 TCATCCTTGT TATCAAAACC CTCTCAACTT TTCCTCCACG GAAGGCGTAA TCAAAGTTTC 121 AAGGTTTCAT GCAACACAAA CAACGTTGAC AAAAACCCTG ACGCTGTTGA TAGACGAAAC 181 GTTCTTTTAA GGTTAGGAGG TCTTTATGGT GCAGCTAATC TTGCACCATT AGCGACTGCT 241 GCACCTATAC CACCTCCTGA TCTCAAGTCT TGTGGTACTG CCCATGTAAA AGAAGGTGTT 301 GATGTAATAT ACAGTTGTTG CCCTCCTGTA CCCGATGATA TCGATAGTGT TCCGTACTAC 361 AAGATCCCTT CTATGACTAA ACTCCGCATC CGCCCCCCTG CTCATGCGGC AGATGAGGAG 421 TACGTATCCA AGTATCAATT GGCTACGAGT CGAATGAGGG AACTTGATAA AGACCCCTTT 481 GACCCTCTTG GCTTTAAACA ACAAGCTAAT ATTCATTGTG CTTATTGCAA CGGTGCTTAC 541 AAAGCTGGTG GTATAGAAAT GCAAGTTCAT TTCTCGTGGC TTTTCTTTCA CTTTCATAGA 601 TGGTACTTGT ACTTTTACGA CAGAATTTTG GGATCACTTA TTAATGATCC AACTTTTGCT 661 TTACCTTACT GGGAA Predicted gene structure (within gDNA segment 8915 to 5183): Exon 1 6499 5823 ( 677 n); cDNA 2 672 ( 671 n); score: 0.889 MATCH C08HBa0336I24.1- SGN-E318179+ 0.889 677 1.003 C PGS_C08HBa0336I24.1-_SGN-E318179+ (6499 5823) Alignment (genomic DNA sequence = upper lines): CTAATACTCT TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTCCCTTC ACCAACAACC 6440 ||| |||||| ||| | ||| | |||||||| |||||||||| |||| ||||| |||| || | CTACTACTCT TCC--T-TTA TGCACCAACA AATCCCTCTC TTCTTCCTTC ACCACCACCA 58 ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC TGTCAAAGTT 6380 |||| | || ||||||||| |||||||||| ||||||||| |||||||| |||||||| ACTCATCCTT GTTATCAAAA CCCTCTCAAC TTTTCCTCCA CGGAAGGCGT AATCAAAGTT 118 TCAAGGTTTC ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT GATAGGAGAA 6320 |||||||||| ||||||| | | || ||||||||| |||||||||| ||||| ||| TCAAGGTTTC ATGCAACACA AACAACGTTG ACAAAAACCC TGACGCTGTT GATAGACGAA 178 ATGTTCTTTT AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA TTAGCCTCTG 6260 | |||||||| | |||||||| ||| |||||| |||||||||| |||||||||| ||||| ||| ACGTTCTTTT AAGGTTAGGA GGTCTTTATG GTGCAGCTAA TCTTGCACCA TTAGCGACTG 238 CTGCTCCTAT ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA GATGATAAAG 6200 |||| ||||| |||||| ||| |||||||| | |||||||| ||||||| || | | ||| CTGCACCTAT ACCACCTCCT GATCTCAAGT CTTGTGGTAC TGCCCATGTA -A--AAGAAG 295 GTACTGAAGT CTCATACAGT TGTTGCCCTC CTGTACCTGA TGATATCGAT AGCGTTCCGT 6140 || ||| || ||||||| |||||||||| ||||||| || |||||||||| || ||||||| GTGTTGATGT AATATACAGT TGTTGCCCTC CTGTACCCGA TGATATCGAT AGTGTTCCGT 355 ACTACAAGTT CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT GCGGCGGATG 6080 |||||||| | |||| ||||| || ||||||| |||||||||| |||||||||| ||||| |||| ACTACAAGAT CCCTTCTATG ACTAAACTCC GCATCCGCCC CCCTGCTCAT GCGGCAGATG 415 AGGAGTACGT AGCCAAGTAT CAATTGGCTA CAAGTCGAAT GAGGGAACTT GATAAAGACC 6020 |||||||||| | |||||||| |||||||||| | |||||||| |||||||||| |||||||||| AGGAGTACGT ATCCAAGTAT CAATTGGCTA CGAGTCGAAT GAGGGAACTT GATAAAGACC 475 CTTTTGACCC TCTTGGGTTT AAACAACAAG CTAATATTCA TTGTGCTTAT TGTAACGGTG 5960 | |||||||| |||||| ||| |||||||||| |||||||||| |||||||||| || ||||||| CCTTTGACCC TCTTGGCTTT AAACAACAAG CTAATATTCA TTGTGCTTAT TGCAACGGTG 535 CTTATAAAAT TGGTGGTAAA GAATTGCAAG TTCATTTCTC GTGGCTTTTC TTTCCGTTCC 5900 |||| ||| |||||||| | ||| |||||| |||||||||| |||||||||| |||| || | CTTACAAAGC TGGTGGTATA GAAATGCAAG TTCATTTCTC GTGGCTTTTC TTTCACTTTC 595 ATAGATGGTA CTTGTACTTT TACGAAAGGA TATTGGGGTC ACTTATTAAT GATCCAACTT 5840 |||||||||| |||||||||| ||||| || | | ||||| || |||||||||| |||||||||| ATAGATGGTA CTTGTACTTT TACGACAGAA TTTTGGGATC ACTTATTAAT GATCCAACTT 655 TTGCTTTACC TTACTGG 5823 |||||||||| ||||||| TTGCTTTACC TTACTGG 672 hqPGS_C08HBa0336I24.1-_SGN-E318179+ (6499 5823) ******************************************************************************** EST sequence 133 +strand 687 n (File: SGN-E316169+) 1 CTTCTTCTAC TCCTAATACT CTTCCTTTAT TATCCACCAA CAAATCCCTC TCTTCTCCCT 61 TCACCAACAA CCACTCTACT TTCTTATCAA AACCCTCTCA ACCTTTCCTC CATGGAAGGC 121 GCTGTCAAAG TTTCAAGGTT TCATGCAACG TTGGCGAGCA TGACAAAAAC CTTGACGCTG 181 TTGATAGGAG AAATGTTCTT TTAGGGTTAG GAGGTTTTTA TGGTGCAGCT AATCTTGCAC 241 CATTAGCCTC TGCTGCTCCT ATACCACCAC CTGATCTCAA ATCTTGTGGT GTTGCCCATA 301 TAGATGATAA AGGTACTGAA GTCTCATACA GTTGTTGCCC TCCTGTACCT GATGATATCG 361 ATAGCGTTCC GTACTACAAG TTCCCTCCTA TGACGAAACT CCGCATCCGC CCCCCTGCTC 421 ATGCGGCGGA TGAGGAGTAC GTAGCCAAGT ATCAATTGGC TACAAGTCGA ATGAGGGAAC 481 TTGATAAAGA CCCTTTTGAC CCTCTTGGGT TTAAACAACA AGCTAATATT CATTGTGCTT 541 ATTGTAACGG TGCTTATAAA ATTGGTGGTA AAGAATTGCA AGTTCATTTC TCGTGGCTTT 601 TCTTTCCGTT CCATAGATGG TACTTGTACT TTTACGAAAG GATATTGGGG TCACTTATTA 661 ATGATCCAAC TTTTGCTTTA CCTTACT Predicted gene structure (within gDNA segment 7111 to 5215): Exon 1 6511 5825 ( 687 n); cDNA 1 687 ( 687 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E316169+ 1.000 687 1.000 C PGS_C08HBa0336I24.1-_SGN-E316169+ (6511 5825) Alignment (genomic DNA sequence = upper lines): CTTCTTCTAC TCCTAATACT CTTCCTTTAT TATCCACCAA CAAATCCCTC TCTTCTCCCT 6452 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTCTTCTAC TCCTAATACT CTTCCTTTAT TATCCACCAA CAAATCCCTC TCTTCTCCCT 60 TCACCAACAA CCACTCTACT TTCTTATCAA AACCCTCTCA ACCTTTCCTC CATGGAAGGC 6392 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACCAACAA CCACTCTACT TTCTTATCAA AACCCTCTCA ACCTTTCCTC CATGGAAGGC 120 GCTGTCAAAG TTTCAAGGTT TCATGCAACG TTGGCGAGCA TGACAAAAAC CTTGACGCTG 6332 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTGTCAAAG TTTCAAGGTT TCATGCAACG TTGGCGAGCA TGACAAAAAC CTTGACGCTG 180 TTGATAGGAG AAATGTTCTT TTAGGGTTAG GAGGTTTTTA TGGTGCAGCT AATCTTGCAC 6272 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATAGGAG AAATGTTCTT TTAGGGTTAG GAGGTTTTTA TGGTGCAGCT AATCTTGCAC 240 CATTAGCCTC TGCTGCTCCT ATACCACCAC CTGATCTCAA ATCTTGTGGT GTTGCCCATA 6212 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTAGCCTC TGCTGCTCCT ATACCACCAC CTGATCTCAA ATCTTGTGGT GTTGCCCATA 300 TAGATGATAA AGGTACTGAA GTCTCATACA GTTGTTGCCC TCCTGTACCT GATGATATCG 6152 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGATGATAA AGGTACTGAA GTCTCATACA GTTGTTGCCC TCCTGTACCT GATGATATCG 360 ATAGCGTTCC GTACTACAAG TTCCCTCCTA TGACGAAACT CCGCATCCGC CCCCCTGCTC 6092 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGCGTTCC GTACTACAAG TTCCCTCCTA TGACGAAACT CCGCATCCGC CCCCCTGCTC 420 ATGCGGCGGA TGAGGAGTAC GTAGCCAAGT ATCAATTGGC TACAAGTCGA ATGAGGGAAC 6032 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGCGGCGGA TGAGGAGTAC GTAGCCAAGT ATCAATTGGC TACAAGTCGA ATGAGGGAAC 480 TTGATAAAGA CCCTTTTGAC CCTCTTGGGT TTAAACAACA AGCTAATATT CATTGTGCTT 5972 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATAAAGA CCCTTTTGAC CCTCTTGGGT TTAAACAACA AGCTAATATT CATTGTGCTT 540 ATTGTAACGG TGCTTATAAA ATTGGTGGTA AAGAATTGCA AGTTCATTTC TCGTGGCTTT 5912 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGTAACGG TGCTTATAAA ATTGGTGGTA AAGAATTGCA AGTTCATTTC TCGTGGCTTT 600 TCTTTCCGTT CCATAGATGG TACTTGTACT TTTACGAAAG GATATTGGGG TCACTTATTA 5852 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTTCCGTT CCATAGATGG TACTTGTACT TTTACGAAAG GATATTGGGG TCACTTATTA 660 ATGATCCAAC TTTTGCTTTA CCTTACT 5825 |||||||||| |||||||||| ||||||| ATGATCCAAC TTTTGCTTTA CCTTACT 687 hqPGS_C08HBa0336I24.1-_SGN-E316169+ (6511 5825) ******************************************************************************** EST sequence 327 +strand 694 n (File: SGN-E323178+) 1 TACAATGTCT TCTTCTACTC CTAATACTCT TCCTTTATTA TCCACCAACA AATCCCTCTC 61 TTCTCCCTTC ACCAACAACC ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA 121 TGGAAGGCGC TGTCAAAGTT TCAAGGTTTC ATGCAACGTT GGCGAGCATG ACAAAAACCT 181 TGACGCTGTT GATAGGAGAA ATGTTCTTTT AGGGTTAGGA GGTTTTTATG GTGCAGCTAA 241 TCTTGCACCA TTAGCCTCTG CTGCTCCTAT ACCACCACCT GATCTCAAAT CTTGTGGTGT 301 TGCCCATATA GATGATAAAG GTACTGAAGT CTCATACAGT TGTTGCCCTC CTGTACCTGA 361 TGATATCGAT AGCGTTCCGT ACTACAAGTT CCCTCCTATG ACGAAACTCC GCATCCGCCC 421 CCCTGCTCAT GCGGCGGATG AGGAGTACGT AGCCAAGTAT CAATTGGCTA CAAGTCGAAT 481 GAGGGAACTT GATAAAGACC CTTTTGACCC TCTTGGGTTT AAACAACAAG CTAATATTCA 541 TTGTGCTTAT TGTAACGGTG CTTATAAAAT TGGTGGTAAA GAATTGCAAG TTCATTTCTC 601 GTGGCTTTTC TTTCCGTTCC ATAGATGGTA CTTGTACTTT TACGAAAGGA TATTGGGGTC 661 ACTTATTAAT GATCCAACTT TTGCTTTACC TTAC Predicted gene structure (within gDNA segment 7119 to 5216): Exon 1 6519 5826 ( 694 n); cDNA 1 694 ( 694 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E323178+ 1.000 694 1.000 C PGS_C08HBa0336I24.1-_SGN-E323178+ (6519 5826) Alignment (genomic DNA sequence = upper lines): TACAATGTCT TCTTCTACTC CTAATACTCT TCCTTTATTA TCCACCAACA AATCCCTCTC 6460 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACAATGTCT TCTTCTACTC CTAATACTCT TCCTTTATTA TCCACCAACA AATCCCTCTC 60 TTCTCCCTTC ACCAACAACC ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA 6400 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTCCCTTC ACCAACAACC ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA 120 TGGAAGGCGC TGTCAAAGTT TCAAGGTTTC ATGCAACGTT GGCGAGCATG ACAAAAACCT 6340 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGAAGGCGC TGTCAAAGTT TCAAGGTTTC ATGCAACGTT GGCGAGCATG ACAAAAACCT 180 TGACGCTGTT GATAGGAGAA ATGTTCTTTT AGGGTTAGGA GGTTTTTATG GTGCAGCTAA 6280 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACGCTGTT GATAGGAGAA ATGTTCTTTT AGGGTTAGGA GGTTTTTATG GTGCAGCTAA 240 TCTTGCACCA TTAGCCTCTG CTGCTCCTAT ACCACCACCT GATCTCAAAT CTTGTGGTGT 6220 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTGCACCA TTAGCCTCTG CTGCTCCTAT ACCACCACCT GATCTCAAAT CTTGTGGTGT 300 TGCCCATATA GATGATAAAG GTACTGAAGT CTCATACAGT TGTTGCCCTC CTGTACCTGA 6160 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCCCATATA GATGATAAAG GTACTGAAGT CTCATACAGT TGTTGCCCTC CTGTACCTGA 360 TGATATCGAT AGCGTTCCGT ACTACAAGTT CCCTCCTATG ACGAAACTCC GCATCCGCCC 6100 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATATCGAT AGCGTTCCGT ACTACAAGTT CCCTCCTATG ACGAAACTCC GCATCCGCCC 420 CCCTGCTCAT GCGGCGGATG AGGAGTACGT AGCCAAGTAT CAATTGGCTA CAAGTCGAAT 6040 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCTGCTCAT GCGGCGGATG AGGAGTACGT AGCCAAGTAT CAATTGGCTA CAAGTCGAAT 480 GAGGGAACTT GATAAAGACC CTTTTGACCC TCTTGGGTTT AAACAACAAG CTAATATTCA 5980 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGGGAACTT GATAAAGACC CTTTTGACCC TCTTGGGTTT AAACAACAAG CTAATATTCA 540 TTGTGCTTAT TGTAACGGTG CTTATAAAAT TGGTGGTAAA GAATTGCAAG TTCATTTCTC 5920 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTGCTTAT TGTAACGGTG CTTATAAAAT TGGTGGTAAA GAATTGCAAG TTCATTTCTC 600 GTGGCTTTTC TTTCCGTTCC ATAGATGGTA CTTGTACTTT TACGAAAGGA TATTGGGGTC 5860 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGGCTTTTC TTTCCGTTCC ATAGATGGTA CTTGTACTTT TACGAAAGGA TATTGGGGTC 660 ACTTATTAAT GATCCAACTT TTGCTTTACC TTAC 5826 |||||||||| |||||||||| |||||||||| |||| ACTTATTAAT GATCCAACTT TTGCTTTACC TTAC 694 hqPGS_C08HBa0336I24.1-_SGN-E323178+ (6519 5826) ******************************************************************************** EST sequence 188 +strand 683 n (File: SGN-E328019+) 1 TCTTCTACTC CTAATACTCT TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTCCCTTC 61 ACCAACAACC ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC 121 TGTCAAAGTT TCAAGGTTTC ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT 181 GATAGGAGAA ATGTTCTTTT AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA 241 TTAGCCTCTG CTGCTCCTAT ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA 301 GATGATAAAG GTACTGAAGT CTCATACAGT TGTTGCCCTC CTGTACCTGA TGATATCGAT 361 AGCGTTCCGT ACTACAAGTT CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT 421 GCGGCGGATG AGGAGTACGT AGCCAAGTAT CAATTGGCTA CAAGTCGAAT GAGGGAACTT 481 GATAAAGACC CTTTTGACCC TCTTGGGTTT AAACAACAAG CTAATATTCA TTGTGCTTAT 541 TGTAACGGTG CTTATAAAAT TGGTGGTAAA GAATTGCAAG TTCATTTCTC GTGGCTTTTC 601 TTTCCGTTCA TAGATGGTAC TTGTACTTTT ACGAAAGGAT ATTGGGGTCA CTTATTAATG 661 ATCCAACTTT TGCTTTACCT TAC Predicted gene structure (within gDNA segment 7109 to 5216): Exon 1 6509 5826 ( 684 n); cDNA 1 683 ( 683 n); score: 0.999 MATCH C08HBa0336I24.1- SGN-E328019+ 0.999 684 1.001 C PGS_C08HBa0336I24.1-_SGN-E328019+ (6509 5826) Alignment (genomic DNA sequence = upper lines): TCTTCTACTC CTAATACTCT TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTCCCTTC 6450 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTCTACTC CTAATACTCT TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTCCCTTC 60 ACCAACAACC ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC 6390 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAACAACC ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC 120 TGTCAAAGTT TCAAGGTTTC ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT 6330 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTCAAAGTT TCAAGGTTTC ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT 180 GATAGGAGAA ATGTTCTTTT AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA 6270 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAGGAGAA ATGTTCTTTT AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA 240 TTAGCCTCTG CTGCTCCTAT ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA 6210 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAGCCTCTG CTGCTCCTAT ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA 300 GATGATAAAG GTACTGAAGT CTCATACAGT TGTTGCCCTC CTGTACCTGA TGATATCGAT 6150 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGATAAAG GTACTGAAGT CTCATACAGT TGTTGCCCTC CTGTACCTGA TGATATCGAT 360 AGCGTTCCGT ACTACAAGTT CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT 6090 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCGTTCCGT ACTACAAGTT CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT 420 GCGGCGGATG AGGAGTACGT AGCCAAGTAT CAATTGGCTA CAAGTCGAAT GAGGGAACTT 6030 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGGCGGATG AGGAGTACGT AGCCAAGTAT CAATTGGCTA CAAGTCGAAT GAGGGAACTT 480 GATAAAGACC CTTTTGACCC TCTTGGGTTT AAACAACAAG CTAATATTCA TTGTGCTTAT 5970 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAAAGACC CTTTTGACCC TCTTGGGTTT AAACAACAAG CTAATATTCA TTGTGCTTAT 540 TGTAACGGTG CTTATAAAAT TGGTGGTAAA GAATTGCAAG TTCATTTCTC GTGGCTTTTC 5910 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTAACGGTG CTTATAAAAT TGGTGGTAAA GAATTGCAAG TTCATTTCTC GTGGCTTTTC 600 TTTCCGTTCC ATAGATGGTA CTTGTACTTT TACGAAAGGA TATTGGGGTC ACTTATTAAT 5850 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCCGTT-C ATAGATGGTA CTTGTACTTT TACGAAAGGA TATTGGGGTC ACTTATTAAT 659 GATCCAACTT TTGCTTTACC TTAC 5826 |||||||||| |||||||||| |||| GATCCAACTT TTGCTTTACC TTAC 683 hqPGS_C08HBa0336I24.1-_SGN-E328019+ (6509 5826) ******************************************************************************** EST sequence 314 +strand 682 n (File: SGN-E334447+) 1 TTCTACTCCT AATACTCTTC CTTTATTATC CACCAACAAA TCCCTCTCTT CTCCCTTCAC 61 CAACAACCAC TCTACTTTCT TATCAAAACC CTCTCAACCT TTCCTCCATG GAAGGCGCTG 121 TCAAAGTTTC AAGGTTTCAT GCAACGTTGG CGAGCATGAC AAAAACCTTG ACGCTGTTGA 181 TAGGAGAAAT GTTCTTTTAG GGTTAGGAGG TTTTTATGGT GCAGCTAATC TTGCACCATT 241 AGCCTCTGCT GCTCCTATAC CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA 301 TGATAAAGGT ACTGAAGTCT CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG 361 CGTTCCGTAC TACAAGTTCC CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC 421 GGCGGATGAG GAGTACGTAG CCAAGTATCA ATTGGCTACA AGTCGAATGA GGGAACTTGA 481 TAAAGACCCT TTTGACCCTC TTGGGTTTAA ACAACAAGCT AATATTCATT GTGCTTATTG 541 TAACGGTGCT TATAAAATTG GTGGTAAAGA ATTGCAAGTT CATTTCTCGT GGCTTTTCTT 601 TCCGTTCCAT AGATGGTACT TGTACTTTTA CGAAAGGATA TTGGGGTCAC TTATTAATGA 661 TCCAAACTTT GCTTTACCTT AC Predicted gene structure (within gDNA segment 7107 to 5063): Exon 1 6507 5826 ( 682 n); cDNA 1 682 ( 682 n); score: 0.997 MATCH C08HBa0336I24.1- SGN-E334447+ 0.997 682 1.000 C PGS_C08HBa0336I24.1-_SGN-E334447+ (6507 5826) Alignment (genomic DNA sequence = upper lines): TTCTACTCCT AATACTCTTC CTTTATTATC CACCAACAAA TCCCTCTCTT CTCCCTTCAC 6448 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTACTCCT AATACTCTTC CTTTATTATC CACCAACAAA TCCCTCTCTT CTCCCTTCAC 60 CAACAACCAC TCTACTTTCT TATCAAAACC CTCTCAACCT TTCCTCCATG GAAGGCGCTG 6388 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACAACCAC TCTACTTTCT TATCAAAACC CTCTCAACCT TTCCTCCATG GAAGGCGCTG 120 TCAAAGTTTC AAGGTTTCAT GCAACGTTGG CGAGCATGAC AAAAACCTTG ACGCTGTTGA 6328 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAAGTTTC AAGGTTTCAT GCAACGTTGG CGAGCATGAC AAAAACCTTG ACGCTGTTGA 180 TAGGAGAAAT GTTCTTTTAG GGTTAGGAGG TTTTTATGGT GCAGCTAATC TTGCACCATT 6268 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGGAGAAAT GTTCTTTTAG GGTTAGGAGG TTTTTATGGT GCAGCTAATC TTGCACCATT 240 AGCCTCTGCT GCTCCTATAC CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA 6208 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCTCTGCT GCTCCTATAC CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA 300 TGATAAAGGT ACTGAAGTCT CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG 6148 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATAAAGGT ACTGAAGTCT CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG 360 CGTTCCGTAC TACAAGTTCC CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC 6088 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTCCGTAC TACAAGTTCC CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC 420 GGCGGATGAG GAGTACGTAG CCAAGTATCA ATTGGCTACA AGTCGAATGA GGGAACTTGA 6028 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCGGATGAG GAGTACGTAG CCAAGTATCA ATTGGCTACA AGTCGAATGA GGGAACTTGA 480 TAAAGACCCT TTTGACCCTC TTGGGTTTAA ACAACAAGCT AATATTCATT GTGCTTATTG 5968 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAGACCCT TTTGACCCTC TTGGGTTTAA ACAACAAGCT AATATTCATT GTGCTTATTG 540 TAACGGTGCT TATAAAATTG GTGGTAAAGA ATTGCAAGTT CATTTCTCGT GGCTTTTCTT 5908 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAACGGTGCT TATAAAATTG GTGGTAAAGA ATTGCAAGTT CATTTCTCGT GGCTTTTCTT 600 TCCGTTCCAT AGATGGTACT TGTACTTTTA CGAAAGGATA TTGGGGTCAC TTATTAATGA 5848 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCGTTCCAT AGATGGTACT TGTACTTTTA CGAAAGGATA TTGGGGTCAC TTATTAATGA 660 TCCAACTTTT GCTTTACCTT AC 5826 ||||| ||| |||||||||| || TCCAAACTTT GCTTTACCTT AC 682 hqPGS_C08HBa0336I24.1-_SGN-E334447+ (6507 5826) ******************************************************************************** EST sequence 316 +strand 682 n (File: SGN-E334547+) 1 TTCTACTCCT AATACTCTTC CTTTATTATC CACCAACAAA TCCCTCTCTT CTCCCTTCAC 61 CAACAACCAC TCTACTTTCT TATCAAAACC CTCTCAACCT TTCCTCCATG GAAGGCGCTG 121 TCAAAGTTTC AAGGTTTCAT GCAACGTTGG CGAGCATGAC AAAAACCTTG ACGCTGTTGA 181 TAGGAGAAAT GTTCTTTTAG GGTTAGGAGG TTTTTATGGT GCAGCTAATC TTGCACCATT 241 AGCCTCTGCT GCTCCTATAC CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA 301 TGATAAAGGT ACTGAAGTCT CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG 361 CGTTCCGTAC TACAAGTTCC CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC 421 GGCGGATGAG GAGTACGTAG CCAAGTATCA ATTGGCTACA AGTCGAATGA GGGAACTTGA 481 TAAAGACCCT TTTGACCCTC TTGGGTTTAA ACAACAAGCT AATATTCATT GTGCTTATTG 541 TAACGGTGCT TATAAAATTG GTGGTAAAGA AATGCAAGTT CATTTCTCGT GGCTTTTCTT 601 TCCGTTCCAT AGATGGTACT TGTACTTTTA CGAAAGGATA TTGGGGTCAC TTATTAATGA 661 TCCAACTTTT GCTTTACCTT AC Predicted gene structure (within gDNA segment 7107 to 5216): Exon 1 6507 5826 ( 682 n); cDNA 1 682 ( 682 n); score: 0.999 MATCH C08HBa0336I24.1- SGN-E334547+ 0.999 682 1.000 C PGS_C08HBa0336I24.1-_SGN-E334547+ (6507 5826) Alignment (genomic DNA sequence = upper lines): TTCTACTCCT AATACTCTTC CTTTATTATC CACCAACAAA TCCCTCTCTT CTCCCTTCAC 6448 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTACTCCT AATACTCTTC CTTTATTATC CACCAACAAA TCCCTCTCTT CTCCCTTCAC 60 CAACAACCAC TCTACTTTCT TATCAAAACC CTCTCAACCT TTCCTCCATG GAAGGCGCTG 6388 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACAACCAC TCTACTTTCT TATCAAAACC CTCTCAACCT TTCCTCCATG GAAGGCGCTG 120 TCAAAGTTTC AAGGTTTCAT GCAACGTTGG CGAGCATGAC AAAAACCTTG ACGCTGTTGA 6328 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAAGTTTC AAGGTTTCAT GCAACGTTGG CGAGCATGAC AAAAACCTTG ACGCTGTTGA 180 TAGGAGAAAT GTTCTTTTAG GGTTAGGAGG TTTTTATGGT GCAGCTAATC TTGCACCATT 6268 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGGAGAAAT GTTCTTTTAG GGTTAGGAGG TTTTTATGGT GCAGCTAATC TTGCACCATT 240 AGCCTCTGCT GCTCCTATAC CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA 6208 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCTCTGCT GCTCCTATAC CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA 300 TGATAAAGGT ACTGAAGTCT CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG 6148 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATAAAGGT ACTGAAGTCT CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG 360 CGTTCCGTAC TACAAGTTCC CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC 6088 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTCCGTAC TACAAGTTCC CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC 420 GGCGGATGAG GAGTACGTAG CCAAGTATCA ATTGGCTACA AGTCGAATGA GGGAACTTGA 6028 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCGGATGAG GAGTACGTAG CCAAGTATCA ATTGGCTACA AGTCGAATGA GGGAACTTGA 480 TAAAGACCCT TTTGACCCTC TTGGGTTTAA ACAACAAGCT AATATTCATT GTGCTTATTG 5968 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAGACCCT TTTGACCCTC TTGGGTTTAA ACAACAAGCT AATATTCATT GTGCTTATTG 540 TAACGGTGCT TATAAAATTG GTGGTAAAGA ATTGCAAGTT CATTTCTCGT GGCTTTTCTT 5908 |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| TAACGGTGCT TATAAAATTG GTGGTAAAGA AATGCAAGTT CATTTCTCGT GGCTTTTCTT 600 TCCGTTCCAT AGATGGTACT TGTACTTTTA CGAAAGGATA TTGGGGTCAC TTATTAATGA 5848 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCGTTCCAT AGATGGTACT TGTACTTTTA CGAAAGGATA TTGGGGTCAC TTATTAATGA 660 TCCAACTTTT GCTTTACCTT AC 5826 |||||||||| |||||||||| || TCCAACTTTT GCTTTACCTT AC 682 hqPGS_C08HBa0336I24.1-_SGN-E334547+ (6507 5826) ******************************************************************************** EST sequence 225 +strand 675 n (File: SGN-E314873+) 1 TCTTCTACTC CTAATACTCT TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTCCCTTC 61 ACCAACAACC ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC 121 TGTCAAAGTT TCAAGGTTTC ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT 181 GATAGGAGAA ATGTTCTTTT AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA 241 TTAGCCTCTG CTGCTCCTAT ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA 301 GATGATAAAG GTACTGAAGT CTCATACAGT TGTTGCCCTC CTGTACCTGA TGATATCGAT 361 AGCGTTCCGT ACTACAAGTT CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT 421 GCGGCGGATG AGGAGTACGT AGCCAAGTAT CAATTGGCTA CAAGTCGAAT GAGGGAACTT 481 GATAAAGACC CTTTTGACCC TCTTGGGTTT AAACAACAAG CTAATATTCA TTGTGCTTAT 541 TGTAACGGTG CTTATAAAAT TGGTGGTAAA GAATTGCAAG TTCATTTCTC GTGGCTTTTC 601 TTTCGTTCCA TAGATGGTAC TTGTACTTTT ACAAAGGATA TTGGGGCACT TATAATGATC 661 CACTTTTGCT TTACT Predicted gene structure (within gDNA segment 7109 to 4837): Exon 1 6509 5831 ( 679 n); cDNA 1 674 ( 674 n); score: 0.993 MATCH C08HBa0336I24.1- SGN-E314873+ 0.993 679 1.006 C PGS_C08HBa0336I24.1-_SGN-E314873+ (6509 5831) Alignment (genomic DNA sequence = upper lines): TCTTCTACTC CTAATACTCT TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTCCCTTC 6450 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTCTACTC CTAATACTCT TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTCCCTTC 60 ACCAACAACC ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC 6390 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAACAACC ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC 120 TGTCAAAGTT TCAAGGTTTC ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT 6330 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTCAAAGTT TCAAGGTTTC ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT 180 GATAGGAGAA ATGTTCTTTT AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA 6270 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAGGAGAA ATGTTCTTTT AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA 240 TTAGCCTCTG CTGCTCCTAT ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA 6210 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAGCCTCTG CTGCTCCTAT ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA 300 GATGATAAAG GTACTGAAGT CTCATACAGT TGTTGCCCTC CTGTACCTGA TGATATCGAT 6150 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGATAAAG GTACTGAAGT CTCATACAGT TGTTGCCCTC CTGTACCTGA TGATATCGAT 360 AGCGTTCCGT ACTACAAGTT CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT 6090 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCGTTCCGT ACTACAAGTT CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT 420 GCGGCGGATG AGGAGTACGT AGCCAAGTAT CAATTGGCTA CAAGTCGAAT GAGGGAACTT 6030 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGGCGGATG AGGAGTACGT AGCCAAGTAT CAATTGGCTA CAAGTCGAAT GAGGGAACTT 480 GATAAAGACC CTTTTGACCC TCTTGGGTTT AAACAACAAG CTAATATTCA TTGTGCTTAT 5970 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAAAGACC CTTTTGACCC TCTTGGGTTT AAACAACAAG CTAATATTCA TTGTGCTTAT 540 TGTAACGGTG CTTATAAAAT TGGTGGTAAA GAATTGCAAG TTCATTTCTC GTGGCTTTTC 5910 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTAACGGTG CTTATAAAAT TGGTGGTAAA GAATTGCAAG TTCATTTCTC GTGGCTTTTC 600 TTTCCGTTCC ATAGATGGTA CTTGTACTTT TACGAAAGGA TATTGGGGTC ACTTATTAAT 5850 ||| |||||| |||||||||| |||||||||| ||| |||||| |||||||| | ||||| |||| TTT-CGTTCC ATAGATGGTA CTTGTACTTT TAC-AAAGGA TATTGGGG-C ACTTA-TAAT 656 GATCCAACTT TTGCTTTAC 5831 ||||| |||| ||||||||| GATCC-ACTT TTGCTTTAC 674 hqPGS_C08HBa0336I24.1-_SGN-E314873+ (6509 5831) ******************************************************************************** EST sequence 122 +strand 680 n (File: SGN-E326499+) 1 TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 61 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 121 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 181 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 241 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 301 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 361 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 421 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 481 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 541 TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 601 TTCTTTCCGT TTCATAGATG GTACTTGTAC TTTTACGAAA GGATATTGGG GTCACTTATT 661 AATGATCCAA CTTTTGCTTT Predicted gene structure (within gDNA segment 7112 to 5223): Exon 1 6512 5833 ( 680 n); cDNA 1 680 ( 680 n); score: 0.999 MATCH C08HBa0336I24.1- SGN-E326499+ 0.999 680 1.000 C PGS_C08HBa0336I24.1-_SGN-E326499+ (6512 5833) Alignment (genomic DNA sequence = upper lines): TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 6453 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 60 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 6393 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 120 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 6333 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 180 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 6273 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 240 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 6213 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 300 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 6153 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 360 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 6093 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 420 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 6033 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 480 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 5973 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 540 TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 5913 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 600 TTCTTTCCGT TCCATAGATG GTACTTGTAC TTTTACGAAA GGATATTGGG GTCACTTATT 5853 |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTTCCGT TTCATAGATG GTACTTGTAC TTTTACGAAA GGATATTGGG GTCACTTATT 660 AATGATCCAA CTTTTGCTTT 5833 |||||||||| |||||||||| AATGATCCAA CTTTTGCTTT 680 hqPGS_C08HBa0336I24.1-_SGN-E326499+ (6512 5833) ******************************************************************************** EST sequence 135 +strand 677 n (File: SGN-E316082+) 1 CTTCTTCTAC TCCTAATACT CTTCCTTTAT TATCCACCAA CAAATCCCTC TCTTCTCCCT 61 TCACCAACAA CCACTCTACT TTCTTATCAA AACCCTCTCA ACCTTTCCTC CATGGAAGGC 121 GCTGTCAAAG TTTCAAGGTT TCATGCAACG TTGGCGAGCA TGACAAAAAC CTTGACGCTG 181 TTGATAGGAG AAATGTTCTT TTAGGGTTAG GAGGTTTTTA TGGTGCAGCT AATCTTGCAC 241 CATTAGCCTC TGCTGCTCCT ATACCACCAC CTGATCTCAA ATCTTGTGGT GTTGCCCATA 301 TAGATGATAA AGGTACTGAA GTCTCATACA GTTGTTGCCC TCCTGTACCT GATGATATCG 361 ATAGCGTTCC GTACTACAAG TTCCCTCCTA TGACGAAACT CCGCATCCGC CCCCCTGCTC 421 ATGCGGCGGA TGAGGAGTAC GTAGCCAAGT ATCAATTGGC TACAAGTCGA ATGAGGGAAC 481 TTGATAAAGA CCCTTTTGAC CCTCTTGGGT TTAAACAACA AGCTAATATT CATTGTGCTT 541 ATTGTAACGG TGCTTATAAA ATTGGTGGTA AAGAATTGCA AGTTCATTTC TCGTGGCTTT 601 TCTTTCCGTT CCATAGATGG TACTTGTACT TTTACGAAAG GATATTGGGG TCACTTATTA 661 ATGATCCCAA CTTTGCT Predicted gene structure (within gDNA segment 7111 to 5135): Exon 1 6511 5835 ( 677 n); cDNA 1 677 ( 677 n); score: 0.996 MATCH C08HBa0336I24.1- SGN-E316082+ 0.996 677 1.000 C PGS_C08HBa0336I24.1-_SGN-E316082+ (6511 5835) Alignment (genomic DNA sequence = upper lines): CTTCTTCTAC TCCTAATACT CTTCCTTTAT TATCCACCAA CAAATCCCTC TCTTCTCCCT 6452 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTCTTCTAC TCCTAATACT CTTCCTTTAT TATCCACCAA CAAATCCCTC TCTTCTCCCT 60 TCACCAACAA CCACTCTACT TTCTTATCAA AACCCTCTCA ACCTTTCCTC CATGGAAGGC 6392 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACCAACAA CCACTCTACT TTCTTATCAA AACCCTCTCA ACCTTTCCTC CATGGAAGGC 120 GCTGTCAAAG TTTCAAGGTT TCATGCAACG TTGGCGAGCA TGACAAAAAC CTTGACGCTG 6332 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTGTCAAAG TTTCAAGGTT TCATGCAACG TTGGCGAGCA TGACAAAAAC CTTGACGCTG 180 TTGATAGGAG AAATGTTCTT TTAGGGTTAG GAGGTTTTTA TGGTGCAGCT AATCTTGCAC 6272 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATAGGAG AAATGTTCTT TTAGGGTTAG GAGGTTTTTA TGGTGCAGCT AATCTTGCAC 240 CATTAGCCTC TGCTGCTCCT ATACCACCAC CTGATCTCAA ATCTTGTGGT GTTGCCCATA 6212 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTAGCCTC TGCTGCTCCT ATACCACCAC CTGATCTCAA ATCTTGTGGT GTTGCCCATA 300 TAGATGATAA AGGTACTGAA GTCTCATACA GTTGTTGCCC TCCTGTACCT GATGATATCG 6152 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGATGATAA AGGTACTGAA GTCTCATACA GTTGTTGCCC TCCTGTACCT GATGATATCG 360 ATAGCGTTCC GTACTACAAG TTCCCTCCTA TGACGAAACT CCGCATCCGC CCCCCTGCTC 6092 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGCGTTCC GTACTACAAG TTCCCTCCTA TGACGAAACT CCGCATCCGC CCCCCTGCTC 420 ATGCGGCGGA TGAGGAGTAC GTAGCCAAGT ATCAATTGGC TACAAGTCGA ATGAGGGAAC 6032 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGCGGCGGA TGAGGAGTAC GTAGCCAAGT ATCAATTGGC TACAAGTCGA ATGAGGGAAC 480 TTGATAAAGA CCCTTTTGAC CCTCTTGGGT TTAAACAACA AGCTAATATT CATTGTGCTT 5972 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATAAAGA CCCTTTTGAC CCTCTTGGGT TTAAACAACA AGCTAATATT CATTGTGCTT 540 ATTGTAACGG TGCTTATAAA ATTGGTGGTA AAGAATTGCA AGTTCATTTC TCGTGGCTTT 5912 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGTAACGG TGCTTATAAA ATTGGTGGTA AAGAATTGCA AGTTCATTTC TCGTGGCTTT 600 TCTTTCCGTT CCATAGATGG TACTTGTACT TTTACGAAAG GATATTGGGG TCACTTATTA 5852 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTTCCGTT CCATAGATGG TACTTGTACT TTTACGAAAG GATATTGGGG TCACTTATTA 660 ATGATCCAAC TTTTGCT 5835 ||||||| | |||||| ATGATCCCAA CTTTGCT 677 hqPGS_C08HBa0336I24.1-_SGN-E316082+ (6511 5835) ******************************************************************************** EST sequence 198 +strand 686 n (File: SGN-E328506+) 1 AACACAATGT CTTCTTCTTC TTCTATTACT ACTACTCTTC CTTTATGCAC CAACAAATCC 61 CTCTCTTCTT CCTTCACCAC CACCAACTCA TCCTTGTTAT CAAAACCCTC TCAACTTTTC 121 CTCCACGGAA GGCGTAATCA AAGTTTCAAG GTTTCATGCA ACGCAAACAA CGTTGACAAA 181 AACCCTGACG CTGTTGATAG ACGAAACGTT CTTTTAGGGT TAGGAGGTCT TTATGGTGCA 241 GCTAATCTTG CACCATTAGC GACTGCTGCA CCTATACCAC CTCCTGATCT CAAGTCTTGT 301 GGTACTGCCC ATGTAAAAGA AGGTGTTGAT GTAATATACA GTTGTTGCCC TCCTGTACCC 361 GATGATATCG ATAGTGTTCC GTACTACAAG TTCCCTTCTA TGACTAAACT CCGCATCCGC 421 CCCCCTGCTC ATGCGGCGGA TGAGGAGTAC GTAGCCAAGT ATCAATTGGC TACGAGTCGA 481 ATGAGGGAAC TTGATAAAGA CCCCTTTGAC CCTCTTGGCT TTAAACAACA AGCTAATATT 541 CATTGTGCTT ATTGCAACGG TGCTTACAAA GTTGGTGGTA AAGAATTGCA AGTTCATTTC 601 TCGTGGCTTT TCTTTCCCTT TCATAGATGG TACTTGTACT TTTACGAAAG AATTTTGGGA 661 TCACTTTATA ATGATCCAAC TTTTGC Predicted gene structure (within gDNA segment 8987 to 5226): Exon 1 6526 5836 ( 691 n); cDNA 1 686 ( 686 n); score: 0.889 MATCH C08HBa0336I24.1- SGN-E328506+ 0.889 691 1.007 C PGS_C08HBa0336I24.1-_SGN-E328506+ (6526 5836) Alignment (genomic DNA sequence = upper lines): AACACAATAC AAT-GTCTTC TTCTACTCCT AATACTCTTC CTTTATTATC CACCAACAAA 6468 |||||||| | ||||| ||||| | || | |||||||| | || ||| |||||||||| AACACAATGT CTTCTTCTTC TTCTATTACT ACTACTCTTC C-TT--TATG CACCAACAAA 57 TCCCTCTCTT CTCCCTTCAC CAACAACCAC TCTACTTTCT TATCAAAACC CTCTCAACCT 6408 |||||||||| || ||||||| || || | || || | || | |||||||||| |||||||| | TCCCTCTCTT CTTCCTTCAC CACCACCAAC TCATCCTTGT TATCAAAACC CTCTCAACTT 117 TTCCTCCATG GAAGGCGCTG TCAAAGTTTC AAGGTTTCAT GCAACGTTGG CGAGCATGAC 6348 |||||||| | ||||||| |||||||||| |||||||||| |||||| | | |||| TTCCTCCACG GAAGGCGTAA TCAAAGTTTC AAGGTTTCAT GCAACGCAAA CAACGTTGAC 177 AAAAACCTTG ACGCTGTTGA TAGGAGAAAT GTTCTTTTAG GGTTAGGAGG TTTTTATGGT 6288 ||||||| || |||||||||| ||| |||| |||||||||| |||||||||| | |||||||| AAAAACCCTG ACGCTGTTGA TAGACGAAAC GTTCTTTTAG GGTTAGGAGG TCTTTATGGT 237 GCAGCTAATC TTGCACCATT AGCCTCTGCT GCTCCTATAC CACCACCTGA TCTCAAATCT 6228 |||||||||| |||||||||| ||| ||||| || ||||||| |||| ||||| |||||| ||| GCAGCTAATC TTGCACCATT AGCGACTGCT GCACCTATAC CACCTCCTGA TCTCAAGTCT 297 TGTGGTGTTG CCCATATAGA TGATAAAGGT ACTGAAGTCT CATACAGTTG TTGCCCTCCT 6168 |||||| || ||||| || | | ||||| ||| || ||||||||| |||||||||| TGTGGTACTG CCCATGTA-A --AAGAAGGT GTTGATGTAA TATACAGTTG TTGCCCTCCT 354 GTACCTGATG ATATCGATAG CGTTCCGTAC TACAAGTTCC CTCCTATGAC GAAACTCCGC 6108 ||||| |||| |||||||||| ||||||||| |||||||||| || ||||||| ||||||||| GTACCCGATG ATATCGATAG TGTTCCGTAC TACAAGTTCC CTTCTATGAC TAAACTCCGC 414 ATCCGCCCCC CTGCTCATGC GGCGGATGAG GAGTACGTAG CCAAGTATCA ATTGGCTACA 6048 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| ATCCGCCCCC CTGCTCATGC GGCGGATGAG GAGTACGTAG CCAAGTATCA ATTGGCTACG 474 AGTCGAATGA GGGAACTTGA TAAAGACCCT TTTGACCCTC TTGGGTTTAA ACAACAAGCT 5988 |||||||||| |||||||||| ||||||||| |||||||||| |||| ||||| |||||||||| AGTCGAATGA GGGAACTTGA TAAAGACCCC TTTGACCCTC TTGGCTTTAA ACAACAAGCT 534 AATATTCATT GTGCTTATTG TAACGGTGCT TATAAAATTG GTGGTAAAGA ATTGCAAGTT 5928 |||||||||| |||||||||| ||||||||| || ||| ||| |||||||||| |||||||||| AATATTCATT GTGCTTATTG CAACGGTGCT TACAAAGTTG GTGGTAAAGA ATTGCAAGTT 594 CATTTCTCGT GGCTTTTCTT TCCGTTCCAT AGATGGTACT TGTACTTTTA CGAAAGGATA 5868 |||||||||| |||||||||| ||| || ||| |||||||||| |||||||||| |||||| || CATTTCTCGT GGCTTTTCTT TCCCTTTCAT AGATGGTACT TGTACTTTTA CGAAAGAATT 654 TTGGGGTCAC TTATTAATGA TCCAACTTTT GC 5836 ||||| |||| || |||||| |||||||||| || TTGGGATCAC TTTATAATGA TCCAACTTTT GC 686 hqPGS_C08HBa0336I24.1-_SGN-E328506+ (6526 5836) ******************************************************************************** EST sequence 63 +strand 664 n (File: SGN-E313146+) 1 CTTCTTCTAC TCCTAATACT CTTCCTTTAT TATCCACCAG CGAAGCCCTC TCTTCTCCCT 61 TCACCAACAA CCACTCTACT TTCTTATCAA AACCCTCTCA ACCTTTCCTC CATGGAAGGC 121 GCTGTCAAAG TTTCAAGGTT TCATGCAACG TTGGCGAGCA TGACAAAAAC CTTGACGCTG 181 TTGATAGGAG AAATGTTCTT TTAGGGTTAG GAGGTTTTTA TGGTGCAGCT AATCTTGCAC 241 CATTAGCCTC TGCTGCTCCT ATACCACCAC CTGATCTCAA ATCTTGTGGT GTTGCCCATA 301 TAGATGATAA AGGTACTGAA GTCTCATACA GTTGTTGCCC TCCTGTACCT GATGATATCG 361 ATAGCGTTCC GTACTACAAG TTCCCTCCTA TGACGAAACT CCGCATCCGC CCCCCTGCTC 421 ATGCGGCGGA TGAGGAGTAC GTAGCCAAGT ATCAATTGGC TACAAGTCGA ATGAGGGAAC 481 TTGATAAAGA CCCTTTTGAC CCTCTTGGGT TTAAACAACA AGCTAATATT CATTGTGCTT 541 ATTGTAACGG TGCTTATAAA ATTGGTGGTA AAGAATTGCA AGTTCATTTC TCGTGGCTTT 601 TCTTTCCGTT CCATAGATGG TACTTGTACT TTTACGAAAG GATATTGGGG TCACTTATTA 661 ATGA Predicted gene structure (within gDNA segment 7111 to 5238): Exon 1 6511 5848 ( 664 n); cDNA 1 664 ( 664 n); score: 0.995 MATCH C08HBa0336I24.1- SGN-E313146+ 0.995 664 1.000 C PGS_C08HBa0336I24.1-_SGN-E313146+ (6511 5848) Alignment (genomic DNA sequence = upper lines): CTTCTTCTAC TCCTAATACT CTTCCTTTAT TATCCACCAA CAAATCCCTC TCTTCTCCCT 6452 |||||||||| |||||||||| |||||||||| ||||||||| | || ||||| |||||||||| CTTCTTCTAC TCCTAATACT CTTCCTTTAT TATCCACCAG CGAAGCCCTC TCTTCTCCCT 60 TCACCAACAA CCACTCTACT TTCTTATCAA AACCCTCTCA ACCTTTCCTC CATGGAAGGC 6392 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACCAACAA CCACTCTACT TTCTTATCAA AACCCTCTCA ACCTTTCCTC CATGGAAGGC 120 GCTGTCAAAG TTTCAAGGTT TCATGCAACG TTGGCGAGCA TGACAAAAAC CTTGACGCTG 6332 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTGTCAAAG TTTCAAGGTT TCATGCAACG TTGGCGAGCA TGACAAAAAC CTTGACGCTG 180 TTGATAGGAG AAATGTTCTT TTAGGGTTAG GAGGTTTTTA TGGTGCAGCT AATCTTGCAC 6272 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATAGGAG AAATGTTCTT TTAGGGTTAG GAGGTTTTTA TGGTGCAGCT AATCTTGCAC 240 CATTAGCCTC TGCTGCTCCT ATACCACCAC CTGATCTCAA ATCTTGTGGT GTTGCCCATA 6212 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTAGCCTC TGCTGCTCCT ATACCACCAC CTGATCTCAA ATCTTGTGGT GTTGCCCATA 300 TAGATGATAA AGGTACTGAA GTCTCATACA GTTGTTGCCC TCCTGTACCT GATGATATCG 6152 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGATGATAA AGGTACTGAA GTCTCATACA GTTGTTGCCC TCCTGTACCT GATGATATCG 360 ATAGCGTTCC GTACTACAAG TTCCCTCCTA TGACGAAACT CCGCATCCGC CCCCCTGCTC 6092 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGCGTTCC GTACTACAAG TTCCCTCCTA TGACGAAACT CCGCATCCGC CCCCCTGCTC 420 ATGCGGCGGA TGAGGAGTAC GTAGCCAAGT ATCAATTGGC TACAAGTCGA ATGAGGGAAC 6032 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGCGGCGGA TGAGGAGTAC GTAGCCAAGT ATCAATTGGC TACAAGTCGA ATGAGGGAAC 480 TTGATAAAGA CCCTTTTGAC CCTCTTGGGT TTAAACAACA AGCTAATATT CATTGTGCTT 5972 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATAAAGA CCCTTTTGAC CCTCTTGGGT TTAAACAACA AGCTAATATT CATTGTGCTT 540 ATTGTAACGG TGCTTATAAA ATTGGTGGTA AAGAATTGCA AGTTCATTTC TCGTGGCTTT 5912 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGTAACGG TGCTTATAAA ATTGGTGGTA AAGAATTGCA AGTTCATTTC TCGTGGCTTT 600 TCTTTCCGTT CCATAGATGG TACTTGTACT TTTACGAAAG GATATTGGGG TCACTTATTA 5852 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTTCCGTT CCATAGATGG TACTTGTACT TTTACGAAAG GATATTGGGG TCACTTATTA 660 ATGA 5848 |||| ATGA 664 hqPGS_C08HBa0336I24.1-_SGN-E313146+ (6511 5848) ******************************************************************************** EST sequence 254 +strand 637 n (File: SGN-E312861+) 1 TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 61 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 121 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 181 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 241 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 301 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 361 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 421 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 481 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 541 TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 601 TTCTTTCCGT TCCATAGATG GTACTTGTAC TTTTACG Predicted gene structure (within gDNA segment 7112 to 5266): Exon 1 6512 5876 ( 637 n); cDNA 1 637 ( 637 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E312861+ 1.000 637 1.000 C PGS_C08HBa0336I24.1-_SGN-E312861+ (6512 5876) Alignment (genomic DNA sequence = upper lines): TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 6453 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 60 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 6393 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 120 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 6333 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 180 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 6273 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 240 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 6213 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 300 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 6153 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 360 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 6093 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 420 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 6033 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 480 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 5973 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 540 TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 5913 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 600 TTCTTTCCGT TCCATAGATG GTACTTGTAC TTTTACG 5876 |||||||||| |||||||||| |||||||||| ||||||| TTCTTTCCGT TCCATAGATG GTACTTGTAC TTTTACG 637 hqPGS_C08HBa0336I24.1-_SGN-E312861+ (6512 5876) ******************************************************************************** EST sequence 96 +strand 619 n (File: SGN-E325586+) 1 AATGTCTTCT TCTACTCCTA ATACTCTTCC TTTATTATCC ACCAACAAAT CCCTCTCTTC 61 TCCCTTCACC AACAACCACT CTACTTTCTT ATCAAAACCC TCTCAACCTT TCCTCCATGG 121 AAGGCGCTGT CAAAGTTTCA AGGTTTCATG CAACGTTGGC GAGCATGACA AAAACCTTGA 181 CGCTGTTGAT AGGAGAAATG TTCTTTTAGG GTTAGGAGGT TTTTATGGTG CAGCTAATCT 241 TGCACCATTA GCCTCTGCTG CTCCTATACC ACCACCTGAT CTCAAATCTT GTGGTGTTGC 301 CCATATAGAT GATAAAGGTA CTGAAGTCTC ATACAGTTGT TGCCCTCCTG TACCTGATGA 361 TATCGATAGC GTTCCGTACT ACAAGTTCCC TCCTATGACG AAACTCCGCA TCCGCCCCCC 421 TGCTCATGCG GCGGATGAGG AGTACGTAGC CAAGTATCAA TTGGCTACAA GTCGAATGAA 481 GGAACTTGAT AAAGACCCTT TTGACCCTCT TGGGTTTAAA CAACAAGCTA ATATTCATTG 541 TGCTTATTGT AACGGTGCTT ATAAAATTGG NTGGTAAAGA TTGCAAGTTC ATTTCTCGTG 601 GCTTTTCTTT CCGTTCCAT Predicted gene structure (within gDNA segment 7116 to 5288): Exon 1 6516 5898 ( 619 n); cDNA 1 619 ( 619 n); score: 0.993 MATCH C08HBa0336I24.1- SGN-E325586+ 0.993 619 1.000 C PGS_C08HBa0336I24.1-_SGN-E325586+ (6516 5898) Alignment (genomic DNA sequence = upper lines): AATGTCTTCT TCTACTCCTA ATACTCTTCC TTTATTATCC ACCAACAAAT CCCTCTCTTC 6457 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGTCTTCT TCTACTCCTA ATACTCTTCC TTTATTATCC ACCAACAAAT CCCTCTCTTC 60 TCCCTTCACC AACAACCACT CTACTTTCTT ATCAAAACCC TCTCAACCTT TCCTCCATGG 6397 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCCTTCACC AACAACCACT CTACTTTCTT ATCAAAACCC TCTCAACCTT TCCTCCATGG 120 AAGGCGCTGT CAAAGTTTCA AGGTTTCATG CAACGTTGGC GAGCATGACA AAAACCTTGA 6337 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGCGCTGT CAAAGTTTCA AGGTTTCATG CAACGTTGGC GAGCATGACA AAAACCTTGA 180 CGCTGTTGAT AGGAGAAATG TTCTTTTAGG GTTAGGAGGT TTTTATGGTG CAGCTAATCT 6277 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTGTTGAT AGGAGAAATG TTCTTTTAGG GTTAGGAGGT TTTTATGGTG CAGCTAATCT 240 TGCACCATTA GCCTCTGCTG CTCCTATACC ACCACCTGAT CTCAAATCTT GTGGTGTTGC 6217 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCACCATTA GCCTCTGCTG CTCCTATACC ACCACCTGAT CTCAAATCTT GTGGTGTTGC 300 CCATATAGAT GATAAAGGTA CTGAAGTCTC ATACAGTTGT TGCCCTCCTG TACCTGATGA 6157 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATATAGAT GATAAAGGTA CTGAAGTCTC ATACAGTTGT TGCCCTCCTG TACCTGATGA 360 TATCGATAGC GTTCCGTACT ACAAGTTCCC TCCTATGACG AAACTCCGCA TCCGCCCCCC 6097 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATCGATAGC GTTCCGTACT ACAAGTTCCC TCCTATGACG AAACTCCGCA TCCGCCCCCC 420 TGCTCATGCG GCGGATGAGG AGTACGTAGC CAAGTATCAA TTGGCTACAA GTCGAATGAG 6037 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| TGCTCATGCG GCGGATGAGG AGTACGTAGC CAAGTATCAA TTGGCTACAA GTCGAATGAA 480 GGAACTTGAT AAAGACCCTT TTGACCCTCT TGGGTTTAAA CAACAAGCTA ATATTCATTG 5977 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAACTTGAT AAAGACCCTT TTGACCCTCT TGGGTTTAAA CAACAAGCTA ATATTCATTG 540 TGCTTATTGT AACGGTGCTT ATAAAATTGG -TGGTAAAGA ATTGCAAGTT CATTTCTCGT 5918 |||||||||| |||||||||| |||||||||| |||||||| |||||||||| |||||||||| TGCTTATTGT AACGGTGCTT ATAAAATTGG NTGGTAAAG- ATTGCAAGTT CATTTCTCGT 599 GGCTTTTCTT TCCGTTCCAT 5898 |||||||||| |||||||||| GGCTTTTCTT TCCGTTCCAT 619 hqPGS_C08HBa0336I24.1-_SGN-E325586+ (6516 5898) ******************************************************************************** EST sequence 101 +strand 608 n (File: SGN-E325657+) 1 TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 61 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 121 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 181 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 241 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 301 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 361 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 421 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAAGGAA 481 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 541 TATTGTAACG GTGCTTATAA ATTGGTGGTA AAGAATTGCA AGTTCATTTC TCGTGGCTTT 601 TCTTTCCG Predicted gene structure (within gDNA segment 7112 to 5294): Exon 1 6512 5904 ( 609 n); cDNA 1 608 ( 608 n); score: 0.997 MATCH C08HBa0336I24.1- SGN-E325657+ 0.997 609 1.002 C PGS_C08HBa0336I24.1-_SGN-E325657+ (6512 5904) Alignment (genomic DNA sequence = upper lines): TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 6453 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 60 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 6393 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 120 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 6333 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 180 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 6273 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 240 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 6213 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 300 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 6153 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 360 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 6093 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 420 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 6033 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAAGGAA 480 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 5973 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 540 TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 5913 |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| TATTGTAACG GTGCTTAT-A AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 599 TTCTTTCCG 5904 ||||||||| TTCTTTCCG 608 hqPGS_C08HBa0336I24.1-_SGN-E325657+ (6512 5904) ******************************************************************************** EST sequence 190 +strand 606 n (File: SGN-E317269+) 1 CTTCTTCTAC TCCTAATACT CTTCCTTTAT TATCCACCAA CAAATCCCTC TCTTCTCCCT 61 TCACCAACAA CCACTCTACT TTCTTATCAA AACCCTCTCA ACCTTTCCTC CATGGAAGGC 121 GCTGTCAAAG TTTCAAGGTT TCATGCAACG TTGGCGAGCA TGACAAAAAC CTTGACGCTG 181 TTGATAGGAG AAATGTTCTT TTAGGGTTAG GAGGTTTTTA TGGTGCAGCT AATCTTGCAC 241 CATTAGCCTC TGCTGCTCCT ATACCACCAC CTGATCTCAA ATCTTGTGGT GTTGCCCATA 301 TAGATGATAA AGGTACTGAA GTCTCATACA GTTGTTGCCC TCCTGTACCT GATGATATCG 361 ATAGCGTTCC GTACTACAAG TTCCCTCCTA TGACGAAACT CCGCATCCGC CCCCCTGCTC 421 ATGCGGCGGA TGAGGAGTAC GTAGCCAAGT ATCAATTGGC TACAAGTCGA ATGAGGGAAC 481 TTGATAAAGA CCCTTTTGAC CCTCTTGGGT TTAAACAACA AGCTAATATT CATTGTGCTT 541 ATTGTAACGG TGCTTATAAA ATTGGTGGTA AAGAATTGCA AGTTCATTTC TCGTGGCTTT 601 TCTTTC Predicted gene structure (within gDNA segment 7111 to 5296): Exon 1 6511 5906 ( 606 n); cDNA 1 606 ( 606 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E317269+ 1.000 606 1.000 C PGS_C08HBa0336I24.1-_SGN-E317269+ (6511 5906) Alignment (genomic DNA sequence = upper lines): CTTCTTCTAC TCCTAATACT CTTCCTTTAT TATCCACCAA CAAATCCCTC TCTTCTCCCT 6452 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTCTTCTAC TCCTAATACT CTTCCTTTAT TATCCACCAA CAAATCCCTC TCTTCTCCCT 60 TCACCAACAA CCACTCTACT TTCTTATCAA AACCCTCTCA ACCTTTCCTC CATGGAAGGC 6392 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACCAACAA CCACTCTACT TTCTTATCAA AACCCTCTCA ACCTTTCCTC CATGGAAGGC 120 GCTGTCAAAG TTTCAAGGTT TCATGCAACG TTGGCGAGCA TGACAAAAAC CTTGACGCTG 6332 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTGTCAAAG TTTCAAGGTT TCATGCAACG TTGGCGAGCA TGACAAAAAC CTTGACGCTG 180 TTGATAGGAG AAATGTTCTT TTAGGGTTAG GAGGTTTTTA TGGTGCAGCT AATCTTGCAC 6272 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATAGGAG AAATGTTCTT TTAGGGTTAG GAGGTTTTTA TGGTGCAGCT AATCTTGCAC 240 CATTAGCCTC TGCTGCTCCT ATACCACCAC CTGATCTCAA ATCTTGTGGT GTTGCCCATA 6212 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTAGCCTC TGCTGCTCCT ATACCACCAC CTGATCTCAA ATCTTGTGGT GTTGCCCATA 300 TAGATGATAA AGGTACTGAA GTCTCATACA GTTGTTGCCC TCCTGTACCT GATGATATCG 6152 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGATGATAA AGGTACTGAA GTCTCATACA GTTGTTGCCC TCCTGTACCT GATGATATCG 360 ATAGCGTTCC GTACTACAAG TTCCCTCCTA TGACGAAACT CCGCATCCGC CCCCCTGCTC 6092 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGCGTTCC GTACTACAAG TTCCCTCCTA TGACGAAACT CCGCATCCGC CCCCCTGCTC 420 ATGCGGCGGA TGAGGAGTAC GTAGCCAAGT ATCAATTGGC TACAAGTCGA ATGAGGGAAC 6032 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGCGGCGGA TGAGGAGTAC GTAGCCAAGT ATCAATTGGC TACAAGTCGA ATGAGGGAAC 480 TTGATAAAGA CCCTTTTGAC CCTCTTGGGT TTAAACAACA AGCTAATATT CATTGTGCTT 5972 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATAAAGA CCCTTTTGAC CCTCTTGGGT TTAAACAACA AGCTAATATT CATTGTGCTT 540 ATTGTAACGG TGCTTATAAA ATTGGTGGTA AAGAATTGCA AGTTCATTTC TCGTGGCTTT 5912 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGTAACGG TGCTTATAAA ATTGGTGGTA AAGAATTGCA AGTTCATTTC TCGTGGCTTT 600 TCTTTC 5906 |||||| TCTTTC 606 hqPGS_C08HBa0336I24.1-_SGN-E317269+ (6511 5906) ******************************************************************************** EST sequence 234 +strand 606 n (File: SGN-E312222+) 1 TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 61 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 121 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 181 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 241 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 301 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 361 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 421 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 481 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 541 TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 601 TTCTTT Predicted gene structure (within gDNA segment 7112 to 5297): Exon 1 6512 5907 ( 606 n); cDNA 1 606 ( 606 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E312222+ 1.000 606 1.000 C PGS_C08HBa0336I24.1-_SGN-E312222+ (6512 5907) Alignment (genomic DNA sequence = upper lines): TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 6453 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 60 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 6393 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 120 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 6333 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 180 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 6273 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 240 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 6213 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 300 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 6153 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 360 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 6093 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 420 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 6033 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 480 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 5973 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 540 TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 5913 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTCGTGGCTT 600 TTCTTT 5907 |||||| TTCTTT 606 hqPGS_C08HBa0336I24.1-_SGN-E312222+ (6512 5907) ******************************************************************************** EST sequence 59 +strand 577 n (File: SGN-E313163+) 1 TTTATTATCC ACCAACAAAT CCCTCTCTTC TCCCTTCACC AACAACCACT CTACTTTCTT 61 ATCAAAACCC TCTCAACCTT TCCTCCATGG AAGGCGCTGT CAAAGTTTCA AGGTTTCATG 121 CAACGTTGGC GAGCATGACA AAAACCTTGA CGCTGTTGAT AGGAGAAATG TTCTTTTAGG 181 GTTAGGAGGT TTTTATGGTG CAGCTAATCT TGCACCATTA GCCTCTGCTG CTCCTATACC 241 ACCACCTGAT CTCAAATCTT GTGGTGTTGC CCATATAGAT GATAAAGGTA CTGAAGTCTC 301 ATACAGTTGT TGCCCTCCTG TACCTGATGA TATCGATAGC GTTCCGTACT ACAAGTTCCC 361 TCCTATGACG AAACTCCGCA TCCGCCCCCC TGCTCATGCG GCGGATGAGG AGTACGTAGC 421 CAAGTATCAA TTGGCTACAA GTCGAATGAG GGAACTTGAT AAAGACCCTT TTGACCCTCT 481 TGGGTTTAAA CAACAAGCTA ATATTCATTG TGCTTATTGT AACGGTGCTT ATAAAATTGG 541 TGGTAAAGAA TTGCAAGTTC ATTTCTCGTG GCTTTTC Predicted gene structure (within gDNA segment 7086 to 5300): Exon 1 6486 5910 ( 577 n); cDNA 1 577 ( 577 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E313163+ 1.000 577 1.000 C PGS_C08HBa0336I24.1-_SGN-E313163+ (6486 5910) Alignment (genomic DNA sequence = upper lines): TTTATTATCC ACCAACAAAT CCCTCTCTTC TCCCTTCACC AACAACCACT CTACTTTCTT 6427 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTATTATCC ACCAACAAAT CCCTCTCTTC TCCCTTCACC AACAACCACT CTACTTTCTT 60 ATCAAAACCC TCTCAACCTT TCCTCCATGG AAGGCGCTGT CAAAGTTTCA AGGTTTCATG 6367 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCAAAACCC TCTCAACCTT TCCTCCATGG AAGGCGCTGT CAAAGTTTCA AGGTTTCATG 120 CAACGTTGGC GAGCATGACA AAAACCTTGA CGCTGTTGAT AGGAGAAATG TTCTTTTAGG 6307 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACGTTGGC GAGCATGACA AAAACCTTGA CGCTGTTGAT AGGAGAAATG TTCTTTTAGG 180 GTTAGGAGGT TTTTATGGTG CAGCTAATCT TGCACCATTA GCCTCTGCTG CTCCTATACC 6247 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTAGGAGGT TTTTATGGTG CAGCTAATCT TGCACCATTA GCCTCTGCTG CTCCTATACC 240 ACCACCTGAT CTCAAATCTT GTGGTGTTGC CCATATAGAT GATAAAGGTA CTGAAGTCTC 6187 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCACCTGAT CTCAAATCTT GTGGTGTTGC CCATATAGAT GATAAAGGTA CTGAAGTCTC 300 ATACAGTTGT TGCCCTCCTG TACCTGATGA TATCGATAGC GTTCCGTACT ACAAGTTCCC 6127 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATACAGTTGT TGCCCTCCTG TACCTGATGA TATCGATAGC GTTCCGTACT ACAAGTTCCC 360 TCCTATGACG AAACTCCGCA TCCGCCCCCC TGCTCATGCG GCGGATGAGG AGTACGTAGC 6067 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTATGACG AAACTCCGCA TCCGCCCCCC TGCTCATGCG GCGGATGAGG AGTACGTAGC 420 CAAGTATCAA TTGGCTACAA GTCGAATGAG GGAACTTGAT AAAGACCCTT TTGACCCTCT 6007 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGTATCAA TTGGCTACAA GTCGAATGAG GGAACTTGAT AAAGACCCTT TTGACCCTCT 480 TGGGTTTAAA CAACAAGCTA ATATTCATTG TGCTTATTGT AACGGTGCTT ATAAAATTGG 5947 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGGTTTAAA CAACAAGCTA ATATTCATTG TGCTTATTGT AACGGTGCTT ATAAAATTGG 540 TGGTAAAGAA TTGCAAGTTC ATTTCTCGTG GCTTTTC 5910 |||||||||| |||||||||| |||||||||| ||||||| TGGTAAAGAA TTGCAAGTTC ATTTCTCGTG GCTTTTC 577 hqPGS_C08HBa0336I24.1-_SGN-E313163+ (6486 5910) ******************************************************************************** EST sequence 178 +strand 492 n (File: SGN-E316976+) 1 TTTCCTCCAT GGAAGGCGCT GTCAAAGTTT CAAGGGTTCA TGCAACGTTG GCGAGCATGA 61 CAAAAACCTT GACGCTGTTG ATAGGAGAAA TGTTCTTTTA AGGTTAGGAG GTTTTTATGG 121 TGCAGCTAAT CTTGCACCAT TAGCCTCTGC TGCTCCTATA CCACCACCTG ATCTCAAATC 181 TTGTGGTGTT GCCCATATAG ATGATAAAGG TACTGAAGTC TCATACAGAT GTTGCCCTCC 241 TGTACCTGAT GATATCTATA GCGTTCCGTA CTACAAGTTC CCTCCTATGA CTAAACTCCG 301 CATCCGCCCC CCTGCTCATG CTGCGGATGA GGAGTACGTA CCCAAGTATC AATTGGCTAC 361 AAGTCGAATG AGGGAACTTG ACTAAGACCC TTTTGACCCT CTTGGGTTTA TACAACAAGC 421 TAATATTCAT TGTGCTTATT GTAACGGCGC TTATAACATT GGCGGTAAAG AATTGCAAGT 481 TCATTTCTCG TG Predicted gene structure (within gDNA segment 7008 to 5307): Exon 1 6408 5917 ( 492 n); cDNA 1 492 ( 492 n); score: 0.974 MATCH C08HBa0336I24.1- SGN-E316976+ 0.974 492 1.000 C PGS_C08HBa0336I24.1-_SGN-E316976+ (6408 5917) Alignment (genomic DNA sequence = upper lines): TTTCCTCCAT GGAAGGCGCT GTCAAAGTTT CAAGGTTTCA TGCAACGTTG GCGAGCATGA 6349 |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| TTTCCTCCAT GGAAGGCGCT GTCAAAGTTT CAAGGGTTCA TGCAACGTTG GCGAGCATGA 60 CAAAAACCTT GACGCTGTTG ATAGGAGAAA TGTTCTTTTA GGGTTAGGAG GTTTTTATGG 6289 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| CAAAAACCTT GACGCTGTTG ATAGGAGAAA TGTTCTTTTA AGGTTAGGAG GTTTTTATGG 120 TGCAGCTAAT CTTGCACCAT TAGCCTCTGC TGCTCCTATA CCACCACCTG ATCTCAAATC 6229 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCAGCTAAT CTTGCACCAT TAGCCTCTGC TGCTCCTATA CCACCACCTG ATCTCAAATC 180 TTGTGGTGTT GCCCATATAG ATGATAAAGG TACTGAAGTC TCATACAGTT GTTGCCCTCC 6169 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| TTGTGGTGTT GCCCATATAG ATGATAAAGG TACTGAAGTC TCATACAGAT GTTGCCCTCC 240 TGTACCTGAT GATATCGATA GCGTTCCGTA CTACAAGTTC CCTCCTATGA CGAAACTCCG 6109 |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| | |||||||| TGTACCTGAT GATATCTATA GCGTTCCGTA CTACAAGTTC CCTCCTATGA CTAAACTCCG 300 CATCCGCCCC CCTGCTCATG CGGCGGATGA GGAGTACGTA GCCAAGTATC AATTGGCTAC 6049 |||||||||| |||||||||| | |||||||| |||||||||| ||||||||| |||||||||| CATCCGCCCC CCTGCTCATG CTGCGGATGA GGAGTACGTA CCCAAGTATC AATTGGCTAC 360 AAGTCGAATG AGGGAACTTG ATAAAGACCC TTTTGACCCT CTTGGGTTTA AACAACAAGC 5989 |||||||||| |||||||||| | ||||||| |||||||||| |||||||||| ||||||||| AAGTCGAATG AGGGAACTTG ACTAAGACCC TTTTGACCCT CTTGGGTTTA TACAACAAGC 420 TAATATTCAT TGTGCTTATT GTAACGGTGC TTATAAAATT GGTGGTAAAG AATTGCAAGT 5929 |||||||||| |||||||||| ||||||| || |||||| ||| || ||||||| |||||||||| TAATATTCAT TGTGCTTATT GTAACGGCGC TTATAACATT GGCGGTAAAG AATTGCAAGT 480 TCATTTCTCG TG 5917 |||||||||| || TCATTTCTCG TG 492 hqPGS_C08HBa0336I24.1-_SGN-E316976+ (6408 5917) ******************************************************************************** EST sequence 70 +strand 586 n (File: SGN-E325836+) 1 TACTCCTAAT ACTCTTCCTT TATTATCCAC CAACAAATCC CTCTCTTCTC CCTTCACCAA 61 CAACCACTCT ACTTTCTTAT CAAAACCCTC TCAACCTTTC CTCCATGGAA GGCGCTGTCA 121 AAGTTTCAAG GTTTCATGCA ACGTTGGCGA GCATGACAAA AACCTTGACG CTGTTGATAG 181 GAGAAATGTT CTTTTAGGGT TAGGAGGTTT TTATGGTGCA GCTAATCTTG CACCATTAGC 241 CTCTGCTGCT CCTATACCAC CACCTGATCT CAAATCTTGT GGTGTTGCCC ATATAGATGA 301 TAAAGGTACT GAAGTCTCAT ACAGTTGTTG CCCTCCTGTA CCTGATGATA TCGATAGCGT 361 TCCGTACTAC AAGTTCCCTC CTATGACGAA ACTCCGCATC CGCCCCCCTG CTCATGCGGC 421 GGATGAGGAG TACGTAGCCA AGTATCAATT GGCTACAAGT CGAATGAGGG AACTTGATAA 481 AGACCCTTTT GACCCTCTTG GGTTTAAACA ACAAGCTAAT ATTCATTGTG CTTATTGTAA 541 CGGTGCTTAT AAAATTGGTG GTAAAGAATT GCAAGTTCAT TTCTCG Predicted gene structure (within gDNA segment 7104 to 5309): Exon 1 6504 5919 ( 586 n); cDNA 1 586 ( 586 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E325836+ 1.000 586 1.000 C PGS_C08HBa0336I24.1-_SGN-E325836+ (6504 5919) Alignment (genomic DNA sequence = upper lines): TACTCCTAAT ACTCTTCCTT TATTATCCAC CAACAAATCC CTCTCTTCTC CCTTCACCAA 6445 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACTCCTAAT ACTCTTCCTT TATTATCCAC CAACAAATCC CTCTCTTCTC CCTTCACCAA 60 CAACCACTCT ACTTTCTTAT CAAAACCCTC TCAACCTTTC CTCCATGGAA GGCGCTGTCA 6385 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACCACTCT ACTTTCTTAT CAAAACCCTC TCAACCTTTC CTCCATGGAA GGCGCTGTCA 120 AAGTTTCAAG GTTTCATGCA ACGTTGGCGA GCATGACAAA AACCTTGACG CTGTTGATAG 6325 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTTTCAAG GTTTCATGCA ACGTTGGCGA GCATGACAAA AACCTTGACG CTGTTGATAG 180 GAGAAATGTT CTTTTAGGGT TAGGAGGTTT TTATGGTGCA GCTAATCTTG CACCATTAGC 6265 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGAAATGTT CTTTTAGGGT TAGGAGGTTT TTATGGTGCA GCTAATCTTG CACCATTAGC 240 CTCTGCTGCT CCTATACCAC CACCTGATCT CAAATCTTGT GGTGTTGCCC ATATAGATGA 6205 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCTGCTGCT CCTATACCAC CACCTGATCT CAAATCTTGT GGTGTTGCCC ATATAGATGA 300 TAAAGGTACT GAAGTCTCAT ACAGTTGTTG CCCTCCTGTA CCTGATGATA TCGATAGCGT 6145 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAGGTACT GAAGTCTCAT ACAGTTGTTG CCCTCCTGTA CCTGATGATA TCGATAGCGT 360 TCCGTACTAC AAGTTCCCTC CTATGACGAA ACTCCGCATC CGCCCCCCTG CTCATGCGGC 6085 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCGTACTAC AAGTTCCCTC CTATGACGAA ACTCCGCATC CGCCCCCCTG CTCATGCGGC 420 GGATGAGGAG TACGTAGCCA AGTATCAATT GGCTACAAGT CGAATGAGGG AACTTGATAA 6025 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGATGAGGAG TACGTAGCCA AGTATCAATT GGCTACAAGT CGAATGAGGG AACTTGATAA 480 AGACCCTTTT GACCCTCTTG GGTTTAAACA ACAAGCTAAT ATTCATTGTG CTTATTGTAA 5965 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGACCCTTTT GACCCTCTTG GGTTTAAACA ACAAGCTAAT ATTCATTGTG CTTATTGTAA 540 CGGTGCTTAT AAAATTGGTG GTAAAGAATT GCAAGTTCAT TTCTCG 5919 |||||||||| |||||||||| |||||||||| |||||||||| |||||| CGGTGCTTAT AAAATTGGTG GTAAAGAATT GCAAGTTCAT TTCTCG 586 hqPGS_C08HBa0336I24.1-_SGN-E325836+ (6504 5919) ******************************************************************************** EST sequence 291 +strand 593 n (File: SGN-E314459+) 1 TCTTCTTCTA TTTCTAATAC TCTTCCTTTA TTATCCATCA ACAAATCCCT CTCTTCTCCC 61 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 121 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 181 GTTGATAGTA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 241 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 301 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 361 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 421 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 481 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 541 TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTC Predicted gene structure (within gDNA segment 7229 to 5310): Exon 1 6512 5920 ( 593 n); cDNA 1 593 ( 593 n); score: 0.993 MATCH C08HBa0336I24.1- SGN-E314459+ 0.993 593 1.000 C PGS_C08HBa0336I24.1-_SGN-E314459+ (6512 5920) Alignment (genomic DNA sequence = upper lines): TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 6453 |||||||||| | ||||||| |||||||||| ||||||| || |||||||||| |||||||||| TCTTCTTCTA TTTCTAATAC TCTTCCTTTA TTATCCATCA ACAAATCCCT CTCTTCTCCC 60 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 6393 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 120 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 6333 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 180 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 6273 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGATAGTA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 240 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 6213 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 300 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 6153 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 360 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 6093 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 420 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 6033 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 480 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 5973 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 540 TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTC 5920 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| TATTGTAACG GTGCTTATAA AATTGGTGGT AAAGAATTGC AAGTTCATTT CTC 593 hqPGS_C08HBa0336I24.1-_SGN-E314459+ (6512 5920) ******************************************************************************** EST sequence 137 +strand 550 n (File: SGN-E327214+) 1 AAATCCCTCT CTTCTCCCTT CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA 61 CCTTTCCTCC ATGGAAGGCG CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT 121 GACAAAAACC TTGACGCTGT TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT 181 GGTGCAGCTA ATCTTGCACC ATTAGCCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA 241 TCTTGTGGTG TTGCCCATAT AGATGATAAA GGTACTGAAG TCTCATACAG TTGTTGCCCT 301 CCTGTACCTG ATGATATCGA TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC 361 CGCATCCGCC CCCCTGCTCA TGCGGCGGAT GAGGAGTACG TAGCCAAGTA TCAATTGGCT 421 ACAAGTCGAA TGAGGGAACT TGATAAAGAC CCTTTTGACC CTCTTGGGTT TAAACAACAA 481 GCTAATATTC ATTGTGCTTA TTGTAACGGT GCTTATAAAA TTGGTGGTAA AGATTGCAAG 541 TTCATTTCTC Predicted gene structure (within gDNA segment 7070 to 5310): Exon 1 6470 5920 ( 551 n); cDNA 1 550 ( 550 n); score: 0.998 MATCH C08HBa0336I24.1- SGN-E327214+ 0.998 551 1.002 C PGS_C08HBa0336I24.1-_SGN-E327214+ (6470 5920) Alignment (genomic DNA sequence = upper lines): AAATCCCTCT CTTCTCCCTT CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA 6411 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATCCCTCT CTTCTCCCTT CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA 60 CCTTTCCTCC ATGGAAGGCG CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT 6351 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTTCCTCC ATGGAAGGCG CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT 120 GACAAAAACC TTGACGCTGT TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT 6291 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACAAAAACC TTGACGCTGT TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT 180 GGTGCAGCTA ATCTTGCACC ATTAGCCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA 6231 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGCAGCTA ATCTTGCACC ATTAGCCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA 240 TCTTGTGGTG TTGCCCATAT AGATGATAAA GGTACTGAAG TCTCATACAG TTGTTGCCCT 6171 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTGTGGTG TTGCCCATAT AGATGATAAA GGTACTGAAG TCTCATACAG TTGTTGCCCT 300 CCTGTACCTG ATGATATCGA TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC 6111 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTGTACCTG ATGATATCGA TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC 360 CGCATCCGCC CCCCTGCTCA TGCGGCGGAT GAGGAGTACG TAGCCAAGTA TCAATTGGCT 6051 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCATCCGCC CCCCTGCTCA TGCGGCGGAT GAGGAGTACG TAGCCAAGTA TCAATTGGCT 420 ACAAGTCGAA TGAGGGAACT TGATAAAGAC CCTTTTGACC CTCTTGGGTT TAAACAACAA 5991 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAGTCGAA TGAGGGAACT TGATAAAGAC CCTTTTGACC CTCTTGGGTT TAAACAACAA 480 GCTAATATTC ATTGTGCTTA TTGTAACGGT GCTTATAAAA TTGGTGGTAA AGAATTGCAA 5931 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| GCTAATATTC ATTGTGCTTA TTGTAACGGT GCTTATAAAA TTGGTGGTAA AG-ATTGCAA 539 GTTCATTTCT C 5920 |||||||||| | GTTCATTTCT C 550 hqPGS_C08HBa0336I24.1-_SGN-E327214+ (6470 5920) ******************************************************************************** EST sequence 252 +strand 586 n (File: SGN-E324317+) 1 CTTCTTCTAC TCCTAATACT CTTCCTTTAT GAGCCACCAA CAAATCCCTC TCTTCTCCCT 61 TCACCAACAA CCACTCTACT TTCTTATCAA AACCCTCTCA ACCTTTCCTC CATGGAAGGC 121 GCTGTCAAAG TTTCAAGGTT TCATGCAACG TTGGCGAGCA TGACAAAAAC CTTGACGCTG 181 TTGATAGGAG AAATGTTCTT TTAGGGTTAG GAGGTTTTTA TGGTGCAGCT AATCTTGCAC 241 CATTAGCCTC TGCTGCTCCT ATACCACCAC CTGATCTCAA ATCTTGTGGT GTTGCCCATA 301 TAGATGATAA AGGTACTGAA GTCTCATACA GTTGTTGCCC TCCTGTACCT GATGATATCG 361 ATAGCGTTCC GTACTACAAG TTCCCTCCTA TGACGAAACT CCGCATCCGC CCCCCTGCTC 421 ATGCGGCGGA TGAGGAGTAC GTAGCCAAGT ATCAATTGGC TACAAGTCGA ATGAGGGAAC 481 TTGATAAAGA CCCTTTTGAC CCTCTTGGGT TTAAACAACA AGCTAATATT CATTGTGCTT 541 ATTGTAACGG TGCTTATAAA ATTGGTGGTA AAGAATTGCA AGTTCA Predicted gene structure (within gDNA segment 7111 to 5316): Exon 1 6511 5926 ( 586 n); cDNA 1 586 ( 586 n); score: 0.997 MATCH C08HBa0336I24.1- SGN-E324317+ 0.997 586 1.000 C PGS_C08HBa0336I24.1-_SGN-E324317+ (6511 5926) Alignment (genomic DNA sequence = upper lines): CTTCTTCTAC TCCTAATACT CTTCCTTTAT TATCCACCAA CAAATCCCTC TCTTCTCCCT 6452 |||||||||| |||||||||| |||||||||| | ||||||| |||||||||| |||||||||| CTTCTTCTAC TCCTAATACT CTTCCTTTAT GAGCCACCAA CAAATCCCTC TCTTCTCCCT 60 TCACCAACAA CCACTCTACT TTCTTATCAA AACCCTCTCA ACCTTTCCTC CATGGAAGGC 6392 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACCAACAA CCACTCTACT TTCTTATCAA AACCCTCTCA ACCTTTCCTC CATGGAAGGC 120 GCTGTCAAAG TTTCAAGGTT TCATGCAACG TTGGCGAGCA TGACAAAAAC CTTGACGCTG 6332 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTGTCAAAG TTTCAAGGTT TCATGCAACG TTGGCGAGCA TGACAAAAAC CTTGACGCTG 180 TTGATAGGAG AAATGTTCTT TTAGGGTTAG GAGGTTTTTA TGGTGCAGCT AATCTTGCAC 6272 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATAGGAG AAATGTTCTT TTAGGGTTAG GAGGTTTTTA TGGTGCAGCT AATCTTGCAC 240 CATTAGCCTC TGCTGCTCCT ATACCACCAC CTGATCTCAA ATCTTGTGGT GTTGCCCATA 6212 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTAGCCTC TGCTGCTCCT ATACCACCAC CTGATCTCAA ATCTTGTGGT GTTGCCCATA 300 TAGATGATAA AGGTACTGAA GTCTCATACA GTTGTTGCCC TCCTGTACCT GATGATATCG 6152 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGATGATAA AGGTACTGAA GTCTCATACA GTTGTTGCCC TCCTGTACCT GATGATATCG 360 ATAGCGTTCC GTACTACAAG TTCCCTCCTA TGACGAAACT CCGCATCCGC CCCCCTGCTC 6092 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGCGTTCC GTACTACAAG TTCCCTCCTA TGACGAAACT CCGCATCCGC CCCCCTGCTC 420 ATGCGGCGGA TGAGGAGTAC GTAGCCAAGT ATCAATTGGC TACAAGTCGA ATGAGGGAAC 6032 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGCGGCGGA TGAGGAGTAC GTAGCCAAGT ATCAATTGGC TACAAGTCGA ATGAGGGAAC 480 TTGATAAAGA CCCTTTTGAC CCTCTTGGGT TTAAACAACA AGCTAATATT CATTGTGCTT 5972 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATAAAGA CCCTTTTGAC CCTCTTGGGT TTAAACAACA AGCTAATATT CATTGTGCTT 540 ATTGTAACGG TGCTTATAAA ATTGGTGGTA AAGAATTGCA AGTTCA 5926 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ATTGTAACGG TGCTTATAAA ATTGGTGGTA AAGAATTGCA AGTTCA 586 hqPGS_C08HBa0336I24.1-_SGN-E324317+ (6511 5926) ******************************************************************************** EST sequence 361 +strand 564 n (File: SGN-E311992+) 1 CTTCTTCTAC TCCTAATACT CTTCCTTTAT TATCCACCAA CAAATCCCTC TCTTCTCCCT 61 TCACCAACAA CCACTCTACT TTCTTATCAA AACCCTCTCA ACCTTTCCTC CATGGAAGGC 121 GCTGTCAAAG TTTCAAGGTT TCATGCAACG TTGGCGAGCA TGACAAAAAC CTTGACGCTG 181 TTGATAGGAG AAATGTTCTT TTAGGGTTAG GAGGTTTTTA TGGTGCAGCT AATCTTGCAC 241 CATTAGCCTC TGCTGCTCCT ATACCACCAC CTGATCTCAA ATCTTGTGGT GTTGCCCATA 301 TAGATGATAA AGGTACTGAA GTCTCATACA GTTGTTGCCC TCCTGTACCT GATGATATCG 361 ATAGCGTTCC GTACTACAAG TTCCCTCCTA TGACGAAACT CCGCATCCGC CCCCCTGCTC 421 ATGCGGCGGA TGAGGAGTAC GTAGCCAAGT ATCAATTGGC TACAAGTCGA ATGAGGGAAC 481 TTGATAAAGA CCCTTTTGAC CCTCTTGGGT TTAAACAACA AGCTAATATT CATTGTGCTT 541 ATTGTAACGG TGCTTATAAA ATTG Predicted gene structure (within gDNA segment 7111 to 5338): Exon 1 6511 5948 ( 564 n); cDNA 1 564 ( 564 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E311992+ 1.000 564 1.000 C PGS_C08HBa0336I24.1-_SGN-E311992+ (6511 5948) Alignment (genomic DNA sequence = upper lines): CTTCTTCTAC TCCTAATACT CTTCCTTTAT TATCCACCAA CAAATCCCTC TCTTCTCCCT 6452 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTCTTCTAC TCCTAATACT CTTCCTTTAT TATCCACCAA CAAATCCCTC TCTTCTCCCT 60 TCACCAACAA CCACTCTACT TTCTTATCAA AACCCTCTCA ACCTTTCCTC CATGGAAGGC 6392 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACCAACAA CCACTCTACT TTCTTATCAA AACCCTCTCA ACCTTTCCTC CATGGAAGGC 120 GCTGTCAAAG TTTCAAGGTT TCATGCAACG TTGGCGAGCA TGACAAAAAC CTTGACGCTG 6332 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTGTCAAAG TTTCAAGGTT TCATGCAACG TTGGCGAGCA TGACAAAAAC CTTGACGCTG 180 TTGATAGGAG AAATGTTCTT TTAGGGTTAG GAGGTTTTTA TGGTGCAGCT AATCTTGCAC 6272 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATAGGAG AAATGTTCTT TTAGGGTTAG GAGGTTTTTA TGGTGCAGCT AATCTTGCAC 240 CATTAGCCTC TGCTGCTCCT ATACCACCAC CTGATCTCAA ATCTTGTGGT GTTGCCCATA 6212 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTAGCCTC TGCTGCTCCT ATACCACCAC CTGATCTCAA ATCTTGTGGT GTTGCCCATA 300 TAGATGATAA AGGTACTGAA GTCTCATACA GTTGTTGCCC TCCTGTACCT GATGATATCG 6152 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGATGATAA AGGTACTGAA GTCTCATACA GTTGTTGCCC TCCTGTACCT GATGATATCG 360 ATAGCGTTCC GTACTACAAG TTCCCTCCTA TGACGAAACT CCGCATCCGC CCCCCTGCTC 6092 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGCGTTCC GTACTACAAG TTCCCTCCTA TGACGAAACT CCGCATCCGC CCCCCTGCTC 420 ATGCGGCGGA TGAGGAGTAC GTAGCCAAGT ATCAATTGGC TACAAGTCGA ATGAGGGAAC 6032 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGCGGCGGA TGAGGAGTAC GTAGCCAAGT ATCAATTGGC TACAAGTCGA ATGAGGGAAC 480 TTGATAAAGA CCCTTTTGAC CCTCTTGGGT TTAAACAACA AGCTAATATT CATTGTGCTT 5972 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATAAAGA CCCTTTTGAC CCTCTTGGGT TTAAACAACA AGCTAATATT CATTGTGCTT 540 ATTGTAACGG TGCTTATAAA ATTG 5948 |||||||||| |||||||||| |||| ATTGTAACGG TGCTTATAAA ATTG 564 hqPGS_C08HBa0336I24.1-_SGN-E311992+ (6511 5948) ******************************************************************************** EST sequence 332 +strand 559 n (File: SGN-E310420+) 1 TCTACTCCTA ATACTCTTCC TTTATTATCC ACCAACAAAT CCCTCTCTTC TCCCTTCACC 61 AACAACCACT CTACTTTCTT ATCAAAACCC TCTCAACCTT TCCTCCATGG AAGGCGCTGT 121 CAAAGTTTCA AGGTTTCATG CAACGTTGGC GAGCATGACA AAAACCTTGA CGCTGTTGAT 181 AGGAGAAATG TTCTTTTAGG GTTAGGAGGT TTTTATGGTG CAGCTAATCT TGCACCATTA 241 GCCTCTGCTG CTCCTATACC ACCACCTGAT CTCAAATCTT GTGGTGTTGC CCATATAGAT 301 GATAAAGGTA CTGAAGTCTC ATACAGTTGT TGCCCTCCTG TACCTGATGA TATCGATAGC 361 GTTCCGTACT ACAAGTTCCC TCCTATGACG AAACTCCGCA TCCGCCCCCC TGCTCATGCG 421 GCGGATGAGG AGTACGTAGC CAAGTATCAA TTGGCTACAA GTCGAATGAG GGAACTTGAT 481 AAAGACCCTT TTGACCCTCT TGGGTTTAAA CAACAAGCTA ATATTCATTG TGCTTATTGT 541 AACGGTGCTT ATAAAATTG Predicted gene structure (within gDNA segment 7106 to 5338): Exon 1 6506 5948 ( 559 n); cDNA 1 559 ( 559 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E310420+ 1.000 559 1.000 C PGS_C08HBa0336I24.1-_SGN-E310420+ (6506 5948) Alignment (genomic DNA sequence = upper lines): TCTACTCCTA ATACTCTTCC TTTATTATCC ACCAACAAAT CCCTCTCTTC TCCCTTCACC 6447 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTACTCCTA ATACTCTTCC TTTATTATCC ACCAACAAAT CCCTCTCTTC TCCCTTCACC 60 AACAACCACT CTACTTTCTT ATCAAAACCC TCTCAACCTT TCCTCCATGG AAGGCGCTGT 6387 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACAACCACT CTACTTTCTT ATCAAAACCC TCTCAACCTT TCCTCCATGG AAGGCGCTGT 120 CAAAGTTTCA AGGTTTCATG CAACGTTGGC GAGCATGACA AAAACCTTGA CGCTGTTGAT 6327 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAGTTTCA AGGTTTCATG CAACGTTGGC GAGCATGACA AAAACCTTGA CGCTGTTGAT 180 AGGAGAAATG TTCTTTTAGG GTTAGGAGGT TTTTATGGTG CAGCTAATCT TGCACCATTA 6267 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGAGAAATG TTCTTTTAGG GTTAGGAGGT TTTTATGGTG CAGCTAATCT TGCACCATTA 240 GCCTCTGCTG CTCCTATACC ACCACCTGAT CTCAAATCTT GTGGTGTTGC CCATATAGAT 6207 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCTCTGCTG CTCCTATACC ACCACCTGAT CTCAAATCTT GTGGTGTTGC CCATATAGAT 300 GATAAAGGTA CTGAAGTCTC ATACAGTTGT TGCCCTCCTG TACCTGATGA TATCGATAGC 6147 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAAAGGTA CTGAAGTCTC ATACAGTTGT TGCCCTCCTG TACCTGATGA TATCGATAGC 360 GTTCCGTACT ACAAGTTCCC TCCTATGACG AAACTCCGCA TCCGCCCCCC TGCTCATGCG 6087 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTCCGTACT ACAAGTTCCC TCCTATGACG AAACTCCGCA TCCGCCCCCC TGCTCATGCG 420 GCGGATGAGG AGTACGTAGC CAAGTATCAA TTGGCTACAA GTCGAATGAG GGAACTTGAT 6027 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGGATGAGG AGTACGTAGC CAAGTATCAA TTGGCTACAA GTCGAATGAG GGAACTTGAT 480 AAAGACCCTT TTGACCCTCT TGGGTTTAAA CAACAAGCTA ATATTCATTG TGCTTATTGT 5967 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGACCCTT TTGACCCTCT TGGGTTTAAA CAACAAGCTA ATATTCATTG TGCTTATTGT 540 AACGGTGCTT ATAAAATTG 5948 |||||||||| ||||||||| AACGGTGCTT ATAAAATTG 559 hqPGS_C08HBa0336I24.1-_SGN-E310420+ (6506 5948) ******************************************************************************** EST sequence 131 +strand 553 n (File: SGN-E316163+) 1 TTCTACTCCT AATACTCTTC CTTTATTATC CACCAACAAA TCCCTCTCTT CTCCCTTCAC 61 CAACAACCAC TCTACTTTCT TATCAAAACC CTCTCAACCT TTCCTCCATG GAAGGCGCTG 121 TCAAAGTTTC AAGGTTTCAT GCAACGTTGG CGAGCATGAC AAAAACCTTG ACGCTGTTGA 181 TAGGAGAAAT GTTCTTTTAG GGTTAGGAGG TTTTTATGGT GCAGCTAATC TTGCACCATT 241 AGCCTCTGCT GCTCCTATAC CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA 301 TGATAAAGGT ACTGAAGTCT CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG 361 CGTTCCGTAC TACAAGTTCC CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC 421 GGCGGATGAG GAGTACGTAG CCAAGTATCA ATTGGCTACA AGTCGAATGA GGAAACTTGA 481 NTAAGAACCC TTTTGACCTC TTGGGTTTAA ACAACAAGCT AATATTCATT GTGCTTATTG 541 TAACGGTGCT TAT Predicted gene structure (within gDNA segment 7107 to 5345): Exon 1 6507 5955 ( 553 n); cDNA 1 553 ( 553 n); score: 0.988 MATCH C08HBa0336I24.1- SGN-E316163+ 0.988 553 1.000 C PGS_C08HBa0336I24.1-_SGN-E316163+ (6507 5955) Alignment (genomic DNA sequence = upper lines): TTCTACTCCT AATACTCTTC CTTTATTATC CACCAACAAA TCCCTCTCTT CTCCCTTCAC 6448 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTACTCCT AATACTCTTC CTTTATTATC CACCAACAAA TCCCTCTCTT CTCCCTTCAC 60 CAACAACCAC TCTACTTTCT TATCAAAACC CTCTCAACCT TTCCTCCATG GAAGGCGCTG 6388 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACAACCAC TCTACTTTCT TATCAAAACC CTCTCAACCT TTCCTCCATG GAAGGCGCTG 120 TCAAAGTTTC AAGGTTTCAT GCAACGTTGG CGAGCATGAC AAAAACCTTG ACGCTGTTGA 6328 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAAGTTTC AAGGTTTCAT GCAACGTTGG CGAGCATGAC AAAAACCTTG ACGCTGTTGA 180 TAGGAGAAAT GTTCTTTTAG GGTTAGGAGG TTTTTATGGT GCAGCTAATC TTGCACCATT 6268 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGGAGAAAT GTTCTTTTAG GGTTAGGAGG TTTTTATGGT GCAGCTAATC TTGCACCATT 240 AGCCTCTGCT GCTCCTATAC CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA 6208 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCTCTGCT GCTCCTATAC CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA 300 TGATAAAGGT ACTGAAGTCT CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG 6148 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATAAAGGT ACTGAAGTCT CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG 360 CGTTCCGTAC TACAAGTTCC CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC 6088 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTCCGTAC TACAAGTTCC CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC 420 GGCGGATGAG GAGTACGTAG CCAAGTATCA ATTGGCTACA AGTCGAATGA GGGAACTTGA 6028 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| GGCGGATGAG GAGTACGTAG CCAAGTATCA ATTGGCTACA AGTCGAATGA GGAAACTTGA 480 TAAAG-ACCC TTTTGACCCT CTTGGGTTTA AACAACAAGC TAATATTCAT TGTGCTTATT 5969 ||| |||| |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| NTAAGAACCC TTTTGA-CCT CTTGGGTTTA AACAACAAGC TAATATTCAT TGTGCTTATT 539 GTAACGGTGC TTAT 5955 |||||||||| |||| GTAACGGTGC TTAT 553 hqPGS_C08HBa0336I24.1-_SGN-E316163+ (6507 5955) ******************************************************************************** EST sequence 100 +strand 554 n (File: SGN-E325526+) 1 AATGTCTTCT TCTACTCCTA ATACTCTTCC TTTATTATCC ACCAACAAAT CCCTCTCTTC 61 TCCCTTCACC AACAACCACT CTACTTTCTT ATCCAAAACC TCTCAACCTT TCCTCCATGG 121 AAGGAGCTAT AAAAGTTTCA AGGTTTCATG AAACGGTGGC GAGCATGACA AAAACCTTGA 181 CTCTGTTGAT AGGAGACATG TTCTTTTAAG GTTAGGAAGT ATTTATGGTG CAGCTAATCT 241 TGCACCATTA ACCTCTGCTG CTACTATACC ACCACATGAT CTCTAATCAT GTGGAGTTGC 301 CCATATATAT GATAAAGGTA CTGAATGCAC ATACACTTGT TGCCCTCCTG TAACTGATGA 361 TATCGATAAC ATTACGGAAT ACAAGATCCC TCCTATGACG AAACTCCTGA TCCACCCCCC 421 TGCTCATGCT GCGGATGAGA AGTACGAATC CAAGATATCA ATTGGCTACA AGTGAAATGA 481 GGGAACTTGA TAAAGACCCT TATGACCCTC TTGGGTTTAA ACAACAAGCT AATATTCACT 541 GTGCTTATTG TAAC Predicted gene structure (within gDNA segment 7116 to 5210): Exon 1 6516 5964 ( 553 n); cDNA 1 554 ( 554 n); score: 0.921 MATCH C08HBa0336I24.1- SGN-E325526+ 0.921 553 0.998 C PGS_C08HBa0336I24.1-_SGN-E325526+ (6516 5964) Alignment (genomic DNA sequence = upper lines): AATGTCTTCT TCTACTCCTA ATACTCTTCC TTTATTATCC ACCAACAAAT CCCTCTCTTC 6457 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGTCTTCT TCTACTCCTA ATACTCTTCC TTTATTATCC ACCAACAAAT CCCTCTCTTC 60 TCCCTTCACC AACAACCACT CTACTTTCTT ATCAAAACCC TCTCAACCTT TCCTCCATGG 6397 |||||||||| |||||||||| |||||||||| ||| ||| || |||||||||| |||||||||| TCCCTTCACC AACAACCACT CTACTTTCTT ATCCAAAACC TCTCAACCTT TCCTCCATGG 120 AAGGCGCTGT CAAAGTTTCA AGGTTTCATG CAACGTTGGC GAGCATGACA AAAACCTTGA 6337 |||| ||| | ||||||||| |||||||||| |||| |||| |||||||||| |||||||||| AAGGAGCTAT AAAAGTTTCA AGGTTTCATG AAACGGTGGC GAGCATGACA AAAACCTTGA 180 CGCTGTTGAT AGGAGAAATG TTCTTTTAGG GTTAGGAGGT TTTTATGGTG CAGCTAATCT 6277 | |||||||| |||||| ||| |||||||| | ||||||| || ||||||||| |||||||||| CTCTGTTGAT AGGAGACATG TTCTTTTAAG GTTAGGAAGT ATTTATGGTG CAGCTAATCT 240 TGCACCATTA GCCTCTGCTG CTCCTATACC ACCACCTGAT CTCAAATCTT GTGGTGTTGC 6217 |||||||||| ||||||||| || ||||||| ||||| |||| ||| |||| | |||| ||||| TGCACCATTA ACCTCTGCTG CTACTATACC ACCACATGAT CTCTAATCAT GTGGAGTTGC 300 CCATATAGAT GATAAAGGTA CTGAAGTCTC ATACAGTTGT TGCCCTCCTG TACCTGATGA 6157 ||||||| || |||||||||| ||||| | | ||||| |||| |||||||||| || ||||||| CCATATATAT GATAAAGGTA CTGAATGCAC ATACACTTGT TGCCCTCCTG TAACTGATGA 360 TATCGATAGC GTTCCGTACT ACAAGTTCCC TCCTATGACG AAACTCCGCA TCCGCCCCCC 6097 |||||||| | || || | | ||||| |||| |||||||||| ||||||| | ||| |||||| TATCGATAAC ATTACGGAAT ACAAGATCCC TCCTATGACG AAACTCCTGA TCCACCCCCC 420 TGCTCATGCG GCGGATGAGG AGTACGTAGC CAAG-TATCA ATTGGCTACA AGTCGAATGA 6038 ||||||||| ||||||||| |||||| | | |||| ||||| |||||||||| ||| ||||| TGCTCATGCT GCGGATGAGA AGTACGAATC CAAGATATCA ATTGGCTACA AGTGAAATGA 480 GGGAACTTGA TAAAGACCCT TTTGACCCTC TTGGGTTTAA ACAACAAGCT AATATTCATT 5978 |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| |||||||| | GGGAACTTGA TAAAGACCCT TATGACCCTC TTGGGTTTAA ACAACAAGCT AATATTCACT 540 GTGCTTATTG TAAC 5964 |||||||||| |||| GTGCTTATTG TAAC 554 hqPGS_C08HBa0336I24.1-_SGN-E325526+ (6516 5964) ******************************************************************************** EST sequence 236 +strand 544 n (File: SGN-E312364+) 1 TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCGCCA ACAAATCCCT CTCTTCTCCC 61 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 121 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 181 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 241 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 301 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 361 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 421 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 481 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 541 TATT Predicted gene structure (within gDNA segment 7112 to 5359): Exon 1 6512 5969 ( 544 n); cDNA 1 544 ( 544 n); score: 0.998 MATCH C08HBa0336I24.1- SGN-E312364+ 0.998 544 1.000 C PGS_C08HBa0336I24.1-_SGN-E312364+ (6512 5969) Alignment (genomic DNA sequence = upper lines): TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 6453 |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCGCCA ACAAATCCCT CTCTTCTCCC 60 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 6393 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 120 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 6333 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 180 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 6273 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 240 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 6213 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 300 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 6153 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 360 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 6093 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 420 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 6033 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 480 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 5973 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT 540 TATT 5969 |||| TATT 544 hqPGS_C08HBa0336I24.1-_SGN-E312364+ (6512 5969) ******************************************************************************** EST sequence 258 +strand 538 n (File: SGN-E324320+) 1 TCTACTCCTA ATACTCTTCC TTTATTATCC ACCAACAAAT CCCTCTCTTC TCCCTTCACC 61 AACAACCACT CTACTTTCTT ATCAAAACCC TCTCAACCTT TCCTCCATGG AAGGCGCTGT 121 CAAAGTTTCA AGGTTTCATG CAACGTTGGC GAGCATGACA AAAACCTTGA CGCTGTTGAT 181 AGGAGAAATG TTCTTTTAGG GTTAGGAGGT TTTTATGGTG CAGCTAATCT TGCACCATTA 241 GCCTCTGCTG CTCCTATACC ACCACCTGAT CTCAAATCTT GTGGTGTTGC CCATATAGAT 301 GATAAAGGTA CTGAAGTCTC ATACAGTTGT TGCCCTCCTG TACCTGATGA TATCGATAGC 361 GTTCCGTACT ACAAGTTCCC TCCTATGACG AAACTCCGCA TGCGCCCCCC TGCTCATGCG 421 GCGGATGAGG AGTACGTAGC CAAGTATCAA TTGGCTACAA GTCGAATGAG GGAACTTGAT 481 AAAGACCCTT TTGACCCTCT TGGGTTTAAA CAACAAGCTA ATATTCATTG TGCTTATT Predicted gene structure (within gDNA segment 7106 to 5359): Exon 1 6506 5969 ( 538 n); cDNA 1 538 ( 538 n); score: 0.998 MATCH C08HBa0336I24.1- SGN-E324320+ 0.998 538 1.000 C PGS_C08HBa0336I24.1-_SGN-E324320+ (6506 5969) Alignment (genomic DNA sequence = upper lines): TCTACTCCTA ATACTCTTCC TTTATTATCC ACCAACAAAT CCCTCTCTTC TCCCTTCACC 6447 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTACTCCTA ATACTCTTCC TTTATTATCC ACCAACAAAT CCCTCTCTTC TCCCTTCACC 60 AACAACCACT CTACTTTCTT ATCAAAACCC TCTCAACCTT TCCTCCATGG AAGGCGCTGT 6387 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACAACCACT CTACTTTCTT ATCAAAACCC TCTCAACCTT TCCTCCATGG AAGGCGCTGT 120 CAAAGTTTCA AGGTTTCATG CAACGTTGGC GAGCATGACA AAAACCTTGA CGCTGTTGAT 6327 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAGTTTCA AGGTTTCATG CAACGTTGGC GAGCATGACA AAAACCTTGA CGCTGTTGAT 180 AGGAGAAATG TTCTTTTAGG GTTAGGAGGT TTTTATGGTG CAGCTAATCT TGCACCATTA 6267 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGAGAAATG TTCTTTTAGG GTTAGGAGGT TTTTATGGTG CAGCTAATCT TGCACCATTA 240 GCCTCTGCTG CTCCTATACC ACCACCTGAT CTCAAATCTT GTGGTGTTGC CCATATAGAT 6207 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCTCTGCTG CTCCTATACC ACCACCTGAT CTCAAATCTT GTGGTGTTGC CCATATAGAT 300 GATAAAGGTA CTGAAGTCTC ATACAGTTGT TGCCCTCCTG TACCTGATGA TATCGATAGC 6147 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAAAGGTA CTGAAGTCTC ATACAGTTGT TGCCCTCCTG TACCTGATGA TATCGATAGC 360 GTTCCGTACT ACAAGTTCCC TCCTATGACG AAACTCCGCA TCCGCCCCCC TGCTCATGCG 6087 |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| GTTCCGTACT ACAAGTTCCC TCCTATGACG AAACTCCGCA TGCGCCCCCC TGCTCATGCG 420 GCGGATGAGG AGTACGTAGC CAAGTATCAA TTGGCTACAA GTCGAATGAG GGAACTTGAT 6027 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGGATGAGG AGTACGTAGC CAAGTATCAA TTGGCTACAA GTCGAATGAG GGAACTTGAT 480 AAAGACCCTT TTGACCCTCT TGGGTTTAAA CAACAAGCTA ATATTCATTG TGCTTATT 5969 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| AAAGACCCTT TTGACCCTCT TGGGTTTAAA CAACAAGCTA ATATTCATTG TGCTTATT 538 hqPGS_C08HBa0336I24.1-_SGN-E324320+ (6506 5969) ******************************************************************************** EST sequence 81 +strand 518 n (File: SGN-E326254+) 1 TTTATTATCC ACCAACAAAT CCCTCTCTTC TCCCTTCACC AACAACCACT CTACTTTCTT 61 ATCAAAACCC TCTCAACCTT TCCTCCATGG AAGGCGCTGT CAAAGTTTCA AGGTTTCATG 121 CAACGTTGGC GAGCATGACA AAAACCTTGA CGCTGTTGAT AGGAGAAATG TTCTTTTAGG 181 GTTAGGAGGT TTTTATGGTG CAGCTAATCT TGCACCATTA GCCTCTGCTG CTCCTATACC 241 ACCACCTGAT CTCAAATCTT GTGGTGTTGC CCATATAGAT GATAAAGGTA CTGAAGTCTC 301 ATACAGTTGT TGCCCTCCTG TACCTGATGA TATCGATAGC GTTCCGTACT ACAAGTTCCC 361 TCCTATGACG AAACTCCGCA TCCGCCCCCC TGCTCATGCG GCGGATGAGG AGTACGTAGC 421 CAAGTATCAA TTGGCTACAA GTCGAATGAG GGAACTTGAT AAAGACCCTT TTGACCCTCT 481 TGGGTTTAAA CAACAAGCTA ATATTCATTG TGCTTATT Predicted gene structure (within gDNA segment 7086 to 5359): Exon 1 6486 5969 ( 518 n); cDNA 1 518 ( 518 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E326254+ 1.000 518 1.000 C PGS_C08HBa0336I24.1-_SGN-E326254+ (6486 5969) Alignment (genomic DNA sequence = upper lines): TTTATTATCC ACCAACAAAT CCCTCTCTTC TCCCTTCACC AACAACCACT CTACTTTCTT 6427 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTATTATCC ACCAACAAAT CCCTCTCTTC TCCCTTCACC AACAACCACT CTACTTTCTT 60 ATCAAAACCC TCTCAACCTT TCCTCCATGG AAGGCGCTGT CAAAGTTTCA AGGTTTCATG 6367 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCAAAACCC TCTCAACCTT TCCTCCATGG AAGGCGCTGT CAAAGTTTCA AGGTTTCATG 120 CAACGTTGGC GAGCATGACA AAAACCTTGA CGCTGTTGAT AGGAGAAATG TTCTTTTAGG 6307 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACGTTGGC GAGCATGACA AAAACCTTGA CGCTGTTGAT AGGAGAAATG TTCTTTTAGG 180 GTTAGGAGGT TTTTATGGTG CAGCTAATCT TGCACCATTA GCCTCTGCTG CTCCTATACC 6247 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTAGGAGGT TTTTATGGTG CAGCTAATCT TGCACCATTA GCCTCTGCTG CTCCTATACC 240 ACCACCTGAT CTCAAATCTT GTGGTGTTGC CCATATAGAT GATAAAGGTA CTGAAGTCTC 6187 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCACCTGAT CTCAAATCTT GTGGTGTTGC CCATATAGAT GATAAAGGTA CTGAAGTCTC 300 ATACAGTTGT TGCCCTCCTG TACCTGATGA TATCGATAGC GTTCCGTACT ACAAGTTCCC 6127 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATACAGTTGT TGCCCTCCTG TACCTGATGA TATCGATAGC GTTCCGTACT ACAAGTTCCC 360 TCCTATGACG AAACTCCGCA TCCGCCCCCC TGCTCATGCG GCGGATGAGG AGTACGTAGC 6067 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTATGACG AAACTCCGCA TCCGCCCCCC TGCTCATGCG GCGGATGAGG AGTACGTAGC 420 CAAGTATCAA TTGGCTACAA GTCGAATGAG GGAACTTGAT AAAGACCCTT TTGACCCTCT 6007 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGTATCAA TTGGCTACAA GTCGAATGAG GGAACTTGAT AAAGACCCTT TTGACCCTCT 480 TGGGTTTAAA CAACAAGCTA ATATTCATTG TGCTTATT 5969 |||||||||| |||||||||| |||||||||| |||||||| TGGGTTTAAA CAACAAGCTA ATATTCATTG TGCTTATT 518 hqPGS_C08HBa0336I24.1-_SGN-E326254+ (6486 5969) ******************************************************************************** EST sequence 113 +strand 524 n (File: SGN-E203001+) 1 GCACGAGTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC TTCACCAACA ACCACTCTAC 61 TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG CGCTGTCAAA GTTTCAAGGT 121 TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT GTTGATAGGA GAAATGTTCT 181 TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA CCATTAGCCT CTGCTGCTCC 241 TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT ATAGATGATA AAGGTACTGA 301 AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC GATAGCGTTC CGTACTACAA 361 GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT CATGCGGCGG ATGAGGAGTA 421 CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAAGGAA CTTGATAAAG ACCCTTTTGA 481 CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATTGTGCT TATT Predicted gene structure (within gDNA segment 7155 to 5359): Exon 1 6485 5969 ( 517 n); cDNA 8 524 ( 517 n); score: 0.998 MATCH C08HBa0336I24.1- SGN-E203001+ 0.998 517 0.987 C PGS_C08HBa0336I24.1-_SGN-E203001+ (6485 5969) Alignment (genomic DNA sequence = upper lines): TTATTATCCA CCAACAAATC CCTCTCTTCT CCCTTCACCA ACAACCACTC TACTTTCTTA 6426 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTATTATCCA CCAACAAATC CCTCTCTTCT CCCTTCACCA ACAACCACTC TACTTTCTTA 67 TCAAAACCCT CTCAACCTTT CCTCCATGGA AGGCGCTGTC AAAGTTTCAA GGTTTCATGC 6366 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAAACCCT CTCAACCTTT CCTCCATGGA AGGCGCTGTC AAAGTTTCAA GGTTTCATGC 127 AACGTTGGCG AGCATGACAA AAACCTTGAC GCTGTTGATA GGAGAAATGT TCTTTTAGGG 6306 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACGTTGGCG AGCATGACAA AAACCTTGAC GCTGTTGATA GGAGAAATGT TCTTTTAGGG 187 TTAGGAGGTT TTTATGGTGC AGCTAATCTT GCACCATTAG CCTCTGCTGC TCCTATACCA 6246 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAGGAGGTT TTTATGGTGC AGCTAATCTT GCACCATTAG CCTCTGCTGC TCCTATACCA 247 CCACCTGATC TCAAATCTTG TGGTGTTGCC CATATAGATG ATAAAGGTAC TGAAGTCTCA 6186 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCACCTGATC TCAAATCTTG TGGTGTTGCC CATATAGATG ATAAAGGTAC TGAAGTCTCA 307 TACAGTTGTT GCCCTCCTGT ACCTGATGAT ATCGATAGCG TTCCGTACTA CAAGTTCCCT 6126 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACAGTTGTT GCCCTCCTGT ACCTGATGAT ATCGATAGCG TTCCGTACTA CAAGTTCCCT 367 CCTATGACGA AACTCCGCAT CCGCCCCCCT GCTCATGCGG CGGATGAGGA GTACGTAGCC 6066 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTATGACGA AACTCCGCAT CCGCCCCCCT GCTCATGCGG CGGATGAGGA GTACGTAGCC 427 AAGTATCAAT TGGCTACAAG TCGAATGAGG GAACTTGATA AAGACCCTTT TGACCCTCTT 6006 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| AAGTATCAAT TGGCTACAAG TCGAATGAAG GAACTTGATA AAGACCCTTT TGACCCTCTT 487 GGGTTTAAAC AACAAGCTAA TATTCATTGT GCTTATT 5969 |||||||||| |||||||||| |||||||||| ||||||| GGGTTTAAAC AACAAGCTAA TATTCATTGT GCTTATT 524 hqPGS_C08HBa0336I24.1-_SGN-E203001+ (6485 5969) ******************************************************************************** EST sequence 342 +strand 540 n (File: SGN-E330100+) 1 TTCTTCTACT CCTAATACTC TTCCTTTATT ATCCACCAAC AAATCCCTCT CTTCTCCCTT 61 CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA CCTTTCCTCC ATGGAAGGCG 121 CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT GACAAAAACC TTGACGCTGT 181 TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT GGTGCAGCTA ATCTTGCACC 241 ATTAGCCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA TCTTGTGGTG TTGCCCATAT 301 AGATGATAAA GGTACTGAAG TCTCATACAG TTGTTGCCCT CCTGTACCTG ATGATATCGA 361 TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC CGCATCCGCC CCCCTGCTCA 421 TGCGGCGGAT GAGGAGTACG TAGCCAAGTA TCAATTGGCT ACAAGTCGAA TGAGGGAACT 481 TGATAAAGAC CCTTTTGACC CTCTTGGGTT TAAACAACAA GCTAATATTC ATTGTGCTTA Predicted gene structure (within gDNA segment 7110 to 5361): Exon 1 6510 5971 ( 540 n); cDNA 1 540 ( 540 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E330100+ 1.000 540 1.000 C PGS_C08HBa0336I24.1-_SGN-E330100+ (6510 5971) Alignment (genomic DNA sequence = upper lines): TTCTTCTACT CCTAATACTC TTCCTTTATT ATCCACCAAC AAATCCCTCT CTTCTCCCTT 6451 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTCTACT CCTAATACTC TTCCTTTATT ATCCACCAAC AAATCCCTCT CTTCTCCCTT 60 CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA CCTTTCCTCC ATGGAAGGCG 6391 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA CCTTTCCTCC ATGGAAGGCG 120 CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT GACAAAAACC TTGACGCTGT 6331 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT GACAAAAACC TTGACGCTGT 180 TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT GGTGCAGCTA ATCTTGCACC 6271 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT GGTGCAGCTA ATCTTGCACC 240 ATTAGCCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA TCTTGTGGTG TTGCCCATAT 6211 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAGCCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA TCTTGTGGTG TTGCCCATAT 300 AGATGATAAA GGTACTGAAG TCTCATACAG TTGTTGCCCT CCTGTACCTG ATGATATCGA 6151 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATGATAAA GGTACTGAAG TCTCATACAG TTGTTGCCCT CCTGTACCTG ATGATATCGA 360 TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC CGCATCCGCC CCCCTGCTCA 6091 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC CGCATCCGCC CCCCTGCTCA 420 TGCGGCGGAT GAGGAGTACG TAGCCAAGTA TCAATTGGCT ACAAGTCGAA TGAGGGAACT 6031 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCGGCGGAT GAGGAGTACG TAGCCAAGTA TCAATTGGCT ACAAGTCGAA TGAGGGAACT 480 TGATAAAGAC CCTTTTGACC CTCTTGGGTT TAAACAACAA GCTAATATTC ATTGTGCTTA 5971 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATAAAGAC CCTTTTGACC CTCTTGGGTT TAAACAACAA GCTAATATTC ATTGTGCTTA 540 hqPGS_C08HBa0336I24.1-_SGN-E330100+ (6510 5971) ******************************************************************************** EST sequence 68 +strand 539 n (File: SGN-E313259+) 1 TCTTCTACTC CTAATACTCT TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTCCCTTC 61 ACCAACAACC ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC 121 TGTCAAAGTT TCAAGGTTTC ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT 181 GATAGGAGAA ATGTTCTTTT AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA 241 TTAGCCTCTG CTGCTCCTAT ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA 301 GATGATAAAG GTACTGAAGT CTCATACAGT TGTTGCCCTC CTGTACCTGA TGATATCGAT 361 AGCGTTCCGT ACTACAAGTT CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT 421 GCGGCGGATG AGGAGTACGT AGCCAAGTAT CAATTGGCTA CAAGTCGAAT GAGGGAACTT 481 GATAAAGACC CTTTTGACCC TCTTGGGTTT AAACAACAAG CTAATATTCA TTGTGCTTA Predicted gene structure (within gDNA segment 7109 to 5361): Exon 1 6509 5971 ( 539 n); cDNA 1 539 ( 539 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E313259+ 1.000 539 1.000 C PGS_C08HBa0336I24.1-_SGN-E313259+ (6509 5971) Alignment (genomic DNA sequence = upper lines): TCTTCTACTC CTAATACTCT TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTCCCTTC 6450 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTCTACTC CTAATACTCT TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTCCCTTC 60 ACCAACAACC ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC 6390 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAACAACC ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC 120 TGTCAAAGTT TCAAGGTTTC ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT 6330 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTCAAAGTT TCAAGGTTTC ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT 180 GATAGGAGAA ATGTTCTTTT AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA 6270 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAGGAGAA ATGTTCTTTT AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA 240 TTAGCCTCTG CTGCTCCTAT ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA 6210 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAGCCTCTG CTGCTCCTAT ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA 300 GATGATAAAG GTACTGAAGT CTCATACAGT TGTTGCCCTC CTGTACCTGA TGATATCGAT 6150 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGATAAAG GTACTGAAGT CTCATACAGT TGTTGCCCTC CTGTACCTGA TGATATCGAT 360 AGCGTTCCGT ACTACAAGTT CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT 6090 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCGTTCCGT ACTACAAGTT CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT 420 GCGGCGGATG AGGAGTACGT AGCCAAGTAT CAATTGGCTA CAAGTCGAAT GAGGGAACTT 6030 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGGCGGATG AGGAGTACGT AGCCAAGTAT CAATTGGCTA CAAGTCGAAT GAGGGAACTT 480 GATAAAGACC CTTTTGACCC TCTTGGGTTT AAACAACAAG CTAATATTCA TTGTGCTTA 5971 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| GATAAAGACC CTTTTGACCC TCTTGGGTTT AAACAACAAG CTAATATTCA TTGTGCTTA 539 hqPGS_C08HBa0336I24.1-_SGN-E313259+ (6509 5971) ******************************************************************************** EST sequence 262 +strand 539 n (File: SGN-E319697+) 1 AATGTCTTCT TCTACTCCTA ATACTCTTCC TTTATTATCC ACCAACAAAT CCCTCTCTTC 61 TCCCTTCACC AACAACCACT CTACTTTCTT ATCAAAACCC TCTCAACCTT TCCTCCATGG 121 AAGGCGCTGT CAAAGTTTCA AGGTTTCATG CAACGTTGGC GAGCATGACA AAAACCTTGA 181 CGCTGTTGAT AGGAGAAATG TTCTTTTAGG GTTAGGAGGT TTTTATGGTG CAGCTAATCT 241 TGCACCATTA GCCTCTGCTG CTCCTATACC ACCACCTGAT CTCAAATCTT GTGGTGTTGC 301 CCATATAGAT GATAAAGGTA CTGAAGTCTC ATACAGTTGT TGCCCTCCTG TACCTGATGA 361 TATCGATAGC GTTCCGTACT ACAAGTTCCC TCCTATGACG AAACTCCGCA TCCGCCCCCC 421 TGCTCATGCG GCGGATGAGG AGTACGTAGC CAAGTATCAA TTGGCTACAA GTCGAATGAG 481 GGAACTTGAT AAAGACCCTT TTGACCCTCT TGGGTTTAAA CAACAAGCTA ATATTCATT Predicted gene structure (within gDNA segment 7116 to 5368): Exon 1 6516 5978 ( 539 n); cDNA 1 539 ( 539 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E319697+ 1.000 539 1.000 C PGS_C08HBa0336I24.1-_SGN-E319697+ (6516 5978) Alignment (genomic DNA sequence = upper lines): AATGTCTTCT TCTACTCCTA ATACTCTTCC TTTATTATCC ACCAACAAAT CCCTCTCTTC 6457 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGTCTTCT TCTACTCCTA ATACTCTTCC TTTATTATCC ACCAACAAAT CCCTCTCTTC 60 TCCCTTCACC AACAACCACT CTACTTTCTT ATCAAAACCC TCTCAACCTT TCCTCCATGG 6397 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCCTTCACC AACAACCACT CTACTTTCTT ATCAAAACCC TCTCAACCTT TCCTCCATGG 120 AAGGCGCTGT CAAAGTTTCA AGGTTTCATG CAACGTTGGC GAGCATGACA AAAACCTTGA 6337 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGCGCTGT CAAAGTTTCA AGGTTTCATG CAACGTTGGC GAGCATGACA AAAACCTTGA 180 CGCTGTTGAT AGGAGAAATG TTCTTTTAGG GTTAGGAGGT TTTTATGGTG CAGCTAATCT 6277 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTGTTGAT AGGAGAAATG TTCTTTTAGG GTTAGGAGGT TTTTATGGTG CAGCTAATCT 240 TGCACCATTA GCCTCTGCTG CTCCTATACC ACCACCTGAT CTCAAATCTT GTGGTGTTGC 6217 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCACCATTA GCCTCTGCTG CTCCTATACC ACCACCTGAT CTCAAATCTT GTGGTGTTGC 300 CCATATAGAT GATAAAGGTA CTGAAGTCTC ATACAGTTGT TGCCCTCCTG TACCTGATGA 6157 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATATAGAT GATAAAGGTA CTGAAGTCTC ATACAGTTGT TGCCCTCCTG TACCTGATGA 360 TATCGATAGC GTTCCGTACT ACAAGTTCCC TCCTATGACG AAACTCCGCA TCCGCCCCCC 6097 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATCGATAGC GTTCCGTACT ACAAGTTCCC TCCTATGACG AAACTCCGCA TCCGCCCCCC 420 TGCTCATGCG GCGGATGAGG AGTACGTAGC CAAGTATCAA TTGGCTACAA GTCGAATGAG 6037 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCTCATGCG GCGGATGAGG AGTACGTAGC CAAGTATCAA TTGGCTACAA GTCGAATGAG 480 GGAACTTGAT AAAGACCCTT TTGACCCTCT TGGGTTTAAA CAACAAGCTA ATATTCATT 5978 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| GGAACTTGAT AAAGACCCTT TTGACCCTCT TGGGTTTAAA CAACAAGCTA ATATTCATT 539 hqPGS_C08HBa0336I24.1-_SGN-E319697+ (6516 5978) ******************************************************************************** EST sequence 344 +strand 534 n (File: SGN-E347000+) 1 TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 61 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 121 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 181 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 241 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 301 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 361 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 421 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 481 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTAAACAACA AGCTAATATT CATT Predicted gene structure (within gDNA segment 7112 to 5368): Exon 1 6512 5978 ( 535 n); cDNA 1 534 ( 534 n); score: 0.998 MATCH C08HBa0336I24.1- SGN-E347000+ 0.998 535 1.002 C PGS_C08HBa0336I24.1-_SGN-E347000+ (6512 5978) Alignment (genomic DNA sequence = upper lines): TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 6453 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 60 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 6393 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 120 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 6333 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 180 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 6273 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 240 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 6213 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 300 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 6153 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 360 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 6093 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 420 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 6033 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 480 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCATT 5978 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| ||||| CTTGATAAAG ACCCTTTTGA CCCTCTTGGG -TTAAACAAC AAGCTAATAT TCATT 534 hqPGS_C08HBa0336I24.1-_SGN-E347000+ (6512 5978) ******************************************************************************** EST sequence 248 +strand 533 n (File: SGN-E324204+) 1 TTCTTCTACT CCTAATACTC TTCCTTTATT ATCCACCAAC AAATCCCTCT CTTCTCCCTT 61 CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA CCTTTCCTCC ATGGAAGGCG 121 CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT GACAAAAACC TTGACGCTGT 181 TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT GGTGCAGCTA ATCTTGCACC 241 ATTAGCCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA TCTTGTGGTG TTGCCCATAT 301 AGATGATAAA GGTACTGAAG TCTCATACAG TTGTTGCCCT CCTGTACCTG ATGATATCGA 361 TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC CGCATCCGCC CCCCTGCTCA 421 TGCGGCGGAT GAGGAGTACG TAGCCAAGTA TCAATTGGCT ACAAGTCGAA TGAGGGAACT 481 TGATAAAGAC CCTTTTGACC CTCTTGGGTT TAAACAACAA GCTAATATTC ATT Predicted gene structure (within gDNA segment 7110 to 5368): Exon 1 6510 5978 ( 533 n); cDNA 1 533 ( 533 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E324204+ 1.000 533 1.000 C PGS_C08HBa0336I24.1-_SGN-E324204+ (6510 5978) Alignment (genomic DNA sequence = upper lines): TTCTTCTACT CCTAATACTC TTCCTTTATT ATCCACCAAC AAATCCCTCT CTTCTCCCTT 6451 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTCTACT CCTAATACTC TTCCTTTATT ATCCACCAAC AAATCCCTCT CTTCTCCCTT 60 CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA CCTTTCCTCC ATGGAAGGCG 6391 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA CCTTTCCTCC ATGGAAGGCG 120 CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT GACAAAAACC TTGACGCTGT 6331 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT GACAAAAACC TTGACGCTGT 180 TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT GGTGCAGCTA ATCTTGCACC 6271 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT GGTGCAGCTA ATCTTGCACC 240 ATTAGCCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA TCTTGTGGTG TTGCCCATAT 6211 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAGCCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA TCTTGTGGTG TTGCCCATAT 300 AGATGATAAA GGTACTGAAG TCTCATACAG TTGTTGCCCT CCTGTACCTG ATGATATCGA 6151 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATGATAAA GGTACTGAAG TCTCATACAG TTGTTGCCCT CCTGTACCTG ATGATATCGA 360 TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC CGCATCCGCC CCCCTGCTCA 6091 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC CGCATCCGCC CCCCTGCTCA 420 TGCGGCGGAT GAGGAGTACG TAGCCAAGTA TCAATTGGCT ACAAGTCGAA TGAGGGAACT 6031 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCGGCGGAT GAGGAGTACG TAGCCAAGTA TCAATTGGCT ACAAGTCGAA TGAGGGAACT 480 TGATAAAGAC CCTTTTGACC CTCTTGGGTT TAAACAACAA GCTAATATTC ATT 5978 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| TGATAAAGAC CCTTTTGACC CTCTTGGGTT TAAACAACAA GCTAATATTC ATT 533 hqPGS_C08HBa0336I24.1-_SGN-E324204+ (6510 5978) ******************************************************************************** EST sequence 75 +strand 512 n (File: SGN-E330745+) 1 TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTCCCTTC ACCAACAACC ACTCTACTTT 61 CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC TGTCAAAGTT TCAAGGTTTC 121 ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT GATAGGAGAA ATGTTCTTTT 181 AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA TTAGCCTCTG CTGCTCCTAT 241 ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA GATGATAAAG GTACTGAAGT 301 CTCATACAGT TGTTGCCCTC CTGTACCTGA TGATATCGAT AGCGTTCCGT ACTACAAGTT 361 CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT GCGGCGGATG AGGAGTACGT 421 AGCCAAGTAT CAATTGGCTA CAAGTCGAAT GAGGGAACTT GATAAAGACC CTTTTGACCC 481 TCTTGGGTTT AAACAACAAG CTAATATTCA TT Predicted gene structure (within gDNA segment 7089 to 5368): Exon 1 6489 5978 ( 512 n); cDNA 1 512 ( 512 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E330745+ 1.000 512 1.000 C PGS_C08HBa0336I24.1-_SGN-E330745+ (6489 5978) Alignment (genomic DNA sequence = upper lines): TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTCCCTTC ACCAACAACC ACTCTACTTT 6430 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTCCCTTC ACCAACAACC ACTCTACTTT 60 CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC TGTCAAAGTT TCAAGGTTTC 6370 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC TGTCAAAGTT TCAAGGTTTC 120 ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT GATAGGAGAA ATGTTCTTTT 6310 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT GATAGGAGAA ATGTTCTTTT 180 AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA TTAGCCTCTG CTGCTCCTAT 6250 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA TTAGCCTCTG CTGCTCCTAT 240 ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA GATGATAAAG GTACTGAAGT 6190 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA GATGATAAAG GTACTGAAGT 300 CTCATACAGT TGTTGCCCTC CTGTACCTGA TGATATCGAT AGCGTTCCGT ACTACAAGTT 6130 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCATACAGT TGTTGCCCTC CTGTACCTGA TGATATCGAT AGCGTTCCGT ACTACAAGTT 360 CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT GCGGCGGATG AGGAGTACGT 6070 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT GCGGCGGATG AGGAGTACGT 420 AGCCAAGTAT CAATTGGCTA CAAGTCGAAT GAGGGAACTT GATAAAGACC CTTTTGACCC 6010 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCAAGTAT CAATTGGCTA CAAGTCGAAT GAGGGAACTT GATAAAGACC CTTTTGACCC 480 TCTTGGGTTT AAACAACAAG CTAATATTCA TT 5978 |||||||||| |||||||||| |||||||||| || TCTTGGGTTT AAACAACAAG CTAATATTCA TT 512 hqPGS_C08HBa0336I24.1-_SGN-E330745+ (6489 5978) ******************************************************************************** EST sequence 184 +strand 458 n (File: SGN-E317244+) 1 TACTTTCTTA TCAAAACCCT CTCAACCTTT CCTCCATGGA AGGCGCTGTC AAAGTTTCAA 61 GGTTTCATGC AACGTTGGCG AGCATGACAA AAACCTTGAC GCTGTTGATA GGAGAAATGT 121 TCTTTTAGGG TTAGGAGGTT TTTATGGTGC AGCTAATCTT GCACCATTAG CCTCTGCTGC 181 TCCTATACCA CCACCTGATC TCAAATCTTG TGGTGTTGCC CATATAGATG ATAAAGGTAC 241 TGAAGTCTCA TACAGTTGTT GCCCTCCTGT ACCTGATGAT ATCGATAGCG TTCCGTACTA 301 CAAGTTCCCT CCTATGACGA AACTCCGCAT CCGCCCCCCT GCTCATGCGG CGGATGAGGA 361 GTACGTAGCC AAGTATCAAT TGGCTACAAG TCGAATGAGG GAACTTGATA AAGACCCTTT 421 TGACCCTCTT GGGGTTAAAA CACAAGCTAA TATTCATT Predicted gene structure (within gDNA segment 7035 to 5368): Exon 1 6435 5978 ( 458 n); cDNA 1 458 ( 458 n); score: 0.993 MATCH C08HBa0336I24.1- SGN-E317244+ 0.993 458 1.000 C PGS_C08HBa0336I24.1-_SGN-E317244+ (6435 5978) Alignment (genomic DNA sequence = upper lines): TACTTTCTTA TCAAAACCCT CTCAACCTTT CCTCCATGGA AGGCGCTGTC AAAGTTTCAA 6376 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACTTTCTTA TCAAAACCCT CTCAACCTTT CCTCCATGGA AGGCGCTGTC AAAGTTTCAA 60 GGTTTCATGC AACGTTGGCG AGCATGACAA AAACCTTGAC GCTGTTGATA GGAGAAATGT 6316 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTTTCATGC AACGTTGGCG AGCATGACAA AAACCTTGAC GCTGTTGATA GGAGAAATGT 120 TCTTTTAGGG TTAGGAGGTT TTTATGGTGC AGCTAATCTT GCACCATTAG CCTCTGCTGC 6256 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTTTAGGG TTAGGAGGTT TTTATGGTGC AGCTAATCTT GCACCATTAG CCTCTGCTGC 180 TCCTATACCA CCACCTGATC TCAAATCTTG TGGTGTTGCC CATATAGATG ATAAAGGTAC 6196 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTATACCA CCACCTGATC TCAAATCTTG TGGTGTTGCC CATATAGATG ATAAAGGTAC 240 TGAAGTCTCA TACAGTTGTT GCCCTCCTGT ACCTGATGAT ATCGATAGCG TTCCGTACTA 6136 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAGTCTCA TACAGTTGTT GCCCTCCTGT ACCTGATGAT ATCGATAGCG TTCCGTACTA 300 CAAGTTCCCT CCTATGACGA AACTCCGCAT CCGCCCCCCT GCTCATGCGG CGGATGAGGA 6076 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGTTCCCT CCTATGACGA AACTCCGCAT CCGCCCCCCT GCTCATGCGG CGGATGAGGA 360 GTACGTAGCC AAGTATCAAT TGGCTACAAG TCGAATGAGG GAACTTGATA AAGACCCTTT 6016 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTACGTAGCC AAGTATCAAT TGGCTACAAG TCGAATGAGG GAACTTGATA AAGACCCTTT 420 TGACCCTCTT GGGTTTAAAC AACAAGCTAA TATTCATT 5978 |||||||||| ||| ||||| ||||||||| |||||||| TGACCCTCTT GGGGTTAAAA CACAAGCTAA TATTCATT 458 hqPGS_C08HBa0336I24.1-_SGN-E317244+ (6435 5978) ******************************************************************************** EST sequence 266 +strand 533 n (File: SGN-E324624+) 1 TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCAGCA ACAAAGGCCT CTCTTCTGCC 61 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 121 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 181 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 241 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 301 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 361 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 421 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 481 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCA Predicted gene structure (within gDNA segment 7112 to 5370): Exon 1 6512 5980 ( 533 n); cDNA 1 533 ( 533 n); score: 0.992 MATCH C08HBa0336I24.1- SGN-E324624+ 0.992 533 1.000 C PGS_C08HBa0336I24.1-_SGN-E324624+ (6512 5980) Alignment (genomic DNA sequence = upper lines): TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 6453 |||||||||| |||||||||| |||||||||| ||||||| || ||||| ||| ||||||| || TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCAGCA ACAAAGGCCT CTCTTCTGCC 60 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 6393 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 120 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 6333 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 180 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 6273 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 240 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 6213 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 300 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 6153 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 360 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 6093 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 420 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 6033 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 480 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCA 5980 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCA 533 hqPGS_C08HBa0336I24.1-_SGN-E324624+ (6512 5980) ******************************************************************************** EST sequence 276 +strand 533 n (File: SGN-E321227+) 1 TCTTCTTCTT CTTCTATTAC TACTACTCTT CCTTTATGCA CCAACAAATG CCTCTTTTCT 61 TCCTTCACCA CCACCAACTC ATCCTTGTTA TCAAAACCCT CTCAACTTTT CCTCCACGGA 121 AGGCGTAATC AAAGTTTCAA GGTTTCATGC AACGCAAACA ACGTTGACAA AAACCCTGAC 181 GCTGTTGATA GACGAAACGT TCTTTTAGGG TTAGGAGGTC TTTATGGTGC AGCTAATCTT 241 GCACCATTAG CGACTGCTGC ACCTATACCA CCTCCTGATC TCAAGTCTTG TGGTACTGCC 301 CATGTAAAAG AAGGTGTTGA TGTAATATAC AGTTGTTGCC CTCCTGTACC CGATGATATC 361 GATAGTGTTC CGTACTACAA GTTCTCTTCT ATGACTAAAC TCCGCATCCG CCCCCCTGCT 421 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACGAGTCG AATGACGGAA 481 CTTGATAAAG ACCCCTTTGA CCCTCTTGGC TNTAAACAAC AAGCTAATAT TCA Predicted gene structure (within gDNA segment 8897 to 5370): Exon 1 6512 5980 ( 533 n); cDNA 4 533 ( 530 n); score: 0.872 MATCH C08HBa0336I24.1- SGN-E321227+ 0.872 533 1.000 C PGS_C08HBa0336I24.1-_SGN-E321227+ (6512 5980) Alignment (genomic DNA sequence = upper lines): TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 6453 ||||||||| || || ||| | || | |||| ||||| |||||| ||| || |||| || TCTTCTTCTT CTATTACTAC TACTCTTCCT TTATGCACCA ACAAATGCCT CTTTTCTTCC 63 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 6393 ||||||| || | |||| | || |||||| |||||||||| ||| |||||| ||| |||||| TTCACCACCA CCAACTCATC CTTGTTATCA AAACCCTCTC AACTTTTCCT CCACGGAAGG 123 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 6333 || ||||| |||||||||| |||||||||| | | | ||||||||| || ||||||| CGTAATCAAA GTTTCAAGGT TTCATGCAAC GCAAACAACG TTGACAAAAA CCCTGACGCT 183 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 6273 |||||||| |||| ||||| |||||||||| |||||| ||| |||||||||| |||||||||| GTTGATAGAC GAAACGTTCT TTTAGGGTTA GGAGGTCTTT ATGGTGCAGC TAATCTTGCA 243 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 6213 |||||||| ||||||| || ||||||||| |||||||||| | |||||||| | ||||||| CCATTAGCGA CTGCTGCACC TATACCACCT CCTGATCTCA AGTCTTGTGG TACTGCCCAT 303 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 6153 || | | ||||| ||| || |||| |||||||||| |||||||||| ||||||||| GTA-A--AAG AAGGTGTTGA TGTAATATAC AGTTGTTGCC CTCCTGTACC CGATGATATC 360 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 6093 ||||| |||| |||||||||| |||| || || ||||| |||| |||||||||| |||||||||| GATAGTGTTC CGTACTACAA GTTCTCTTCT ATGACTAAAC TCCGCATCCG CCCCCCTGCT 420 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 6033 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| ||||| |||| CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACGAGTCG AATGACGGAA 480 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAATAT TCA 5980 |||||||||| |||| ||||| ||||||||| | |||||||| |||||||||| ||| CTTGATAAAG ACCCCTTTGA CCCTCTTGGC TNTAAACAAC AAGCTAATAT TCA 533 hqPGS_C08HBa0336I24.1-_SGN-E321227+ (6512 5980) ******************************************************************************** EST sequence 250 +strand 528 n (File: SGN-E312738+) 1 TTCTACTCCT AATACTCTTC CTTTATTATC CACCAACAAA TCCCTCTCTT CTCCCTTCAC 61 CAACAACCAC TCTACTTTCT TATCAAAACC CTCTCAACCT TTCCTCCATG GAAGGCGCTG 121 TCAAAGTTTC AAGGTTTCAT GCAACGTTGG CGAGCATGAC AAAAACCTTG ACGCTGTTGA 181 TAGGAGAAAT GTTCTTTTAG GGTTAGGAGG TTTTTATGGT GCAGCTAATC TTGCACCATT 241 AGCCTCTGCT GCTCCTATAC CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA 301 TGATAAAGGT ACTGAAGTCT CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG 361 CGTTCCGTAC TACAAGTTCC CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC 421 GGCGGATGAG GAGTACGTAG CCAAGTATCA ATTGGCTACA AGTCGAATGA GGGAACTTGA 481 TAAAGACCCT TTTGACCCTC TTGGGTTTAA ACAACAAGCT AATATTCA Predicted gene structure (within gDNA segment 7107 to 5370): Exon 1 6507 5980 ( 528 n); cDNA 1 528 ( 528 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E312738+ 1.000 528 1.000 C PGS_C08HBa0336I24.1-_SGN-E312738+ (6507 5980) Alignment (genomic DNA sequence = upper lines): TTCTACTCCT AATACTCTTC CTTTATTATC CACCAACAAA TCCCTCTCTT CTCCCTTCAC 6448 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTACTCCT AATACTCTTC CTTTATTATC CACCAACAAA TCCCTCTCTT CTCCCTTCAC 60 CAACAACCAC TCTACTTTCT TATCAAAACC CTCTCAACCT TTCCTCCATG GAAGGCGCTG 6388 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACAACCAC TCTACTTTCT TATCAAAACC CTCTCAACCT TTCCTCCATG GAAGGCGCTG 120 TCAAAGTTTC AAGGTTTCAT GCAACGTTGG CGAGCATGAC AAAAACCTTG ACGCTGTTGA 6328 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAAGTTTC AAGGTTTCAT GCAACGTTGG CGAGCATGAC AAAAACCTTG ACGCTGTTGA 180 TAGGAGAAAT GTTCTTTTAG GGTTAGGAGG TTTTTATGGT GCAGCTAATC TTGCACCATT 6268 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGGAGAAAT GTTCTTTTAG GGTTAGGAGG TTTTTATGGT GCAGCTAATC TTGCACCATT 240 AGCCTCTGCT GCTCCTATAC CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA 6208 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCTCTGCT GCTCCTATAC CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA 300 TGATAAAGGT ACTGAAGTCT CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG 6148 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATAAAGGT ACTGAAGTCT CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG 360 CGTTCCGTAC TACAAGTTCC CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC 6088 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTCCGTAC TACAAGTTCC CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC 420 GGCGGATGAG GAGTACGTAG CCAAGTATCA ATTGGCTACA AGTCGAATGA GGGAACTTGA 6028 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCGGATGAG GAGTACGTAG CCAAGTATCA ATTGGCTACA AGTCGAATGA GGGAACTTGA 480 TAAAGACCCT TTTGACCCTC TTGGGTTTAA ACAACAAGCT AATATTCA 5980 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| TAAAGACCCT TTTGACCCTC TTGGGTTTAA ACAACAAGCT AATATTCA 528 hqPGS_C08HBa0336I24.1-_SGN-E312738+ (6507 5980) ******************************************************************************** EST sequence 368 +strand 507 n (File: SGN-E313833+) 1 TTTATTATCC ACCAACAAAT CCCTCTCTTC TCCCTGCACC AACAACCACT CTACTTTCTT 61 ATCAAAACCC TCTCAACCTT TCCTCCATGG AAGGCGCTGT CAAAGTTTCA AGGTTTCATG 121 CAACGTTGGC GAGCATGACA AAAACCTTGA CGCTGTTGAT AGGAGAAATG TTCTTTTAGG 181 GTTAGGAGGT TTTTATGGTG CAGCTAATCT TGCACCATTA GCCTCTGCTG CTCCTATACC 241 ACCACCTGAT CTCAAATCTT GTGGTGTTGC CCATATAGAT GATAAAGGTA CTGAAGTCTC 301 ATACAGTTGT TGCCCTCCTG TACCTGATGA TATCGATAGC GTTCCGTACT ACAAGTTCCC 361 TCCTATGACG AAACTCCGCA TCCGCCCCCC TGCTCATGCG GCGGATGAGG AGTACGTAGC 421 CAAGTATCAA TTGGCTACAA GTCGAATGAG GGAACTTGAT AAAGACCCTT TTGACCCTCT 481 TGGGTTTAAA CAACAAGCTA ATATTCA Predicted gene structure (within gDNA segment 7086 to 5370): Exon 1 6486 5980 ( 507 n); cDNA 1 507 ( 507 n); score: 0.998 MATCH C08HBa0336I24.1- SGN-E313833+ 0.998 507 1.000 C PGS_C08HBa0336I24.1-_SGN-E313833+ (6486 5980) Alignment (genomic DNA sequence = upper lines): TTTATTATCC ACCAACAAAT CCCTCTCTTC TCCCTTCACC AACAACCACT CTACTTTCTT 6427 |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| TTTATTATCC ACCAACAAAT CCCTCTCTTC TCCCTGCACC AACAACCACT CTACTTTCTT 60 ATCAAAACCC TCTCAACCTT TCCTCCATGG AAGGCGCTGT CAAAGTTTCA AGGTTTCATG 6367 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCAAAACCC TCTCAACCTT TCCTCCATGG AAGGCGCTGT CAAAGTTTCA AGGTTTCATG 120 CAACGTTGGC GAGCATGACA AAAACCTTGA CGCTGTTGAT AGGAGAAATG TTCTTTTAGG 6307 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACGTTGGC GAGCATGACA AAAACCTTGA CGCTGTTGAT AGGAGAAATG TTCTTTTAGG 180 GTTAGGAGGT TTTTATGGTG CAGCTAATCT TGCACCATTA GCCTCTGCTG CTCCTATACC 6247 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTAGGAGGT TTTTATGGTG CAGCTAATCT TGCACCATTA GCCTCTGCTG CTCCTATACC 240 ACCACCTGAT CTCAAATCTT GTGGTGTTGC CCATATAGAT GATAAAGGTA CTGAAGTCTC 6187 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCACCTGAT CTCAAATCTT GTGGTGTTGC CCATATAGAT GATAAAGGTA CTGAAGTCTC 300 ATACAGTTGT TGCCCTCCTG TACCTGATGA TATCGATAGC GTTCCGTACT ACAAGTTCCC 6127 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATACAGTTGT TGCCCTCCTG TACCTGATGA TATCGATAGC GTTCCGTACT ACAAGTTCCC 360 TCCTATGACG AAACTCCGCA TCCGCCCCCC TGCTCATGCG GCGGATGAGG AGTACGTAGC 6067 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTATGACG AAACTCCGCA TCCGCCCCCC TGCTCATGCG GCGGATGAGG AGTACGTAGC 420 CAAGTATCAA TTGGCTACAA GTCGAATGAG GGAACTTGAT AAAGACCCTT TTGACCCTCT 6007 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGTATCAA TTGGCTACAA GTCGAATGAG GGAACTTGAT AAAGACCCTT TTGACCCTCT 480 TGGGTTTAAA CAACAAGCTA ATATTCA 5980 |||||||||| |||||||||| ||||||| TGGGTTTAAA CAACAAGCTA ATATTCA 507 hqPGS_C08HBa0336I24.1-_SGN-E313833+ (6486 5980) ******************************************************************************** EST sequence 83 +strand 497 n (File: SGN-E326256+) 1 ACCAACAAAT CCCTCTCTTC TCCCTTCACC AGCAACCACT CTACTTTCTT ATCAAAACCC 61 TCTCAACCTT TCCTCCATGG AAGGCGCTGT CAAAGTTTCA AGGTTTCATG CAACGTTGGC 121 GAGCATGACA AAAACCTTGA CGCTGTTGAT AGGAGAAATG TTCTTTTAGG GTTAGGAGGT 181 TTTTATGGTG CAGCTAATCT TGCACCATTA GCCTCTGCTG CTCCTATACC ACCACCTGAT 241 CTCAAATCTT GTGGTGTTGC CCATATAGAT GATAAAGGTA CTGAAGTCTC ATACAGTTGT 301 TGCCCTCCTG TACCTGATGA TATCGATAGC GTTCCGTACT ACAAGTTCCC TCCTATGACG 361 AAACTCCGCA TCCGCCCCCC TGCTCATGCG GCGGATGAGG AGTACGTAGC CAAGTATCAA 421 TTGGCTACAA GTCGAATGAG GGAACTTGAT AAAGACCCTT TTGACCCTCT TGGGTTTAAA 481 CAACAAGCTA ATATTCA Predicted gene structure (within gDNA segment 7076 to 5370): Exon 1 6476 5980 ( 497 n); cDNA 1 497 ( 497 n); score: 0.998 MATCH C08HBa0336I24.1- SGN-E326256+ 0.998 497 1.000 C PGS_C08HBa0336I24.1-_SGN-E326256+ (6476 5980) Alignment (genomic DNA sequence = upper lines): ACCAACAAAT CCCTCTCTTC TCCCTTCACC AACAACCACT CTACTTTCTT ATCAAAACCC 6417 |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| ACCAACAAAT CCCTCTCTTC TCCCTTCACC AGCAACCACT CTACTTTCTT ATCAAAACCC 60 TCTCAACCTT TCCTCCATGG AAGGCGCTGT CAAAGTTTCA AGGTTTCATG CAACGTTGGC 6357 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTCAACCTT TCCTCCATGG AAGGCGCTGT CAAAGTTTCA AGGTTTCATG CAACGTTGGC 120 GAGCATGACA AAAACCTTGA CGCTGTTGAT AGGAGAAATG TTCTTTTAGG GTTAGGAGGT 6297 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGCATGACA AAAACCTTGA CGCTGTTGAT AGGAGAAATG TTCTTTTAGG GTTAGGAGGT 180 TTTTATGGTG CAGCTAATCT TGCACCATTA GCCTCTGCTG CTCCTATACC ACCACCTGAT 6237 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTATGGTG CAGCTAATCT TGCACCATTA GCCTCTGCTG CTCCTATACC ACCACCTGAT 240 CTCAAATCTT GTGGTGTTGC CCATATAGAT GATAAAGGTA CTGAAGTCTC ATACAGTTGT 6177 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCAAATCTT GTGGTGTTGC CCATATAGAT GATAAAGGTA CTGAAGTCTC ATACAGTTGT 300 TGCCCTCCTG TACCTGATGA TATCGATAGC GTTCCGTACT ACAAGTTCCC TCCTATGACG 6117 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCCCTCCTG TACCTGATGA TATCGATAGC GTTCCGTACT ACAAGTTCCC TCCTATGACG 360 AAACTCCGCA TCCGCCCCCC TGCTCATGCG GCGGATGAGG AGTACGTAGC CAAGTATCAA 6057 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACTCCGCA TCCGCCCCCC TGCTCATGCG GCGGATGAGG AGTACGTAGC CAAGTATCAA 420 TTGGCTACAA GTCGAATGAG GGAACTTGAT AAAGACCCTT TTGACCCTCT TGGGTTTAAA 5997 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGCTACAA GTCGAATGAG GGAACTTGAT AAAGACCCTT TTGACCCTCT TGGGTTTAAA 480 CAACAAGCTA ATATTCA 5980 |||||||||| ||||||| CAACAAGCTA ATATTCA 497 hqPGS_C08HBa0336I24.1-_SGN-E326256+ (6476 5980) ******************************************************************************** EST sequence 256 +strand 528 n (File: SGN-E312803+) 1 TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCG GCAAATGGCT CTCTTCTCCC 61 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 121 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 181 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 241 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG CGTTGCCCAT 301 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 361 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCCCATCCG CCCCCCTGCT 421 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 481 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAAT Predicted gene structure (within gDNA segment 7112 to 5375): Exon 1 6512 5985 ( 528 n); cDNA 1 528 ( 528 n); score: 0.989 MATCH C08HBa0336I24.1- SGN-E312803+ 0.989 528 1.000 C PGS_C08HBa0336I24.1-_SGN-E312803+ (6512 5985) Alignment (genomic DNA sequence = upper lines): TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 6453 |||||||||| |||||||||| |||||||||| ||||||||| ||||| || |||||||||| TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCG GCAAATGGCT CTCTTCTCCC 60 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 6393 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 120 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 6333 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 180 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 6273 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 240 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 6213 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG CGTTGCCCAT 300 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 6153 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 360 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 6093 |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCCCATCCG CCCCCCTGCT 420 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 6033 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 480 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAAT 5985 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| CTTGATAAAG ACCCTTTTGA CCCTCTTGGG TTTAAACAAC AAGCTAAT 528 hqPGS_C08HBa0336I24.1-_SGN-E312803+ (6512 5985) ******************************************************************************** EST sequence 73 +strand 505 n (File: SGN-E330622+) 1 TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTTCCTTC ACGGACAACC ACTCTACTTT 61 CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC TGTCAAAGTT TCAAGGATTC 121 ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT GATAGGAGAA ATGTTCTTTT 181 AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA TTAGCCTCTG CTGCTCCTAT 241 ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA TATGATAAAG GTACTGAAGT 301 CTCATACAGC TGTTGCCCTC CTGTACCTGA TGATATCGAT AGCGTTCCGT ACTACAAGTT 361 CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT GCGGCGGATG AGGAGTACGT 421 AGCCAAGTAT CAATTGGCTA CAAGTCGAAT GATGGAACTT GATAAAGACC CTGTTGACCC 481 TCTTGGGTTT AAACAACAAG CTAAT Predicted gene structure (within gDNA segment 7089 to 5375): Exon 1 6489 5985 ( 505 n); cDNA 1 505 ( 505 n); score: 0.984 MATCH C08HBa0336I24.1- SGN-E330622+ 0.984 505 1.000 C PGS_C08HBa0336I24.1-_SGN-E330622+ (6489 5985) Alignment (genomic DNA sequence = upper lines): TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTCCCTTC ACCAACAACC ACTCTACTTT 6430 |||||||||| |||||||||| |||||||||| |||| ||||| || |||||| |||||||||| TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTTCCTTC ACGGACAACC ACTCTACTTT 60 CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC TGTCAAAGTT TCAAGGTTTC 6370 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC TGTCAAAGTT TCAAGGATTC 120 ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT GATAGGAGAA ATGTTCTTTT 6310 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT GATAGGAGAA ATGTTCTTTT 180 AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA TTAGCCTCTG CTGCTCCTAT 6250 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA TTAGCCTCTG CTGCTCCTAT 240 ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA GATGATAAAG GTACTGAAGT 6190 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA TATGATAAAG GTACTGAAGT 300 CTCATACAGT TGTTGCCCTC CTGTACCTGA TGATATCGAT AGCGTTCCGT ACTACAAGTT 6130 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCATACAGC TGTTGCCCTC CTGTACCTGA TGATATCGAT AGCGTTCCGT ACTACAAGTT 360 CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT GCGGCGGATG AGGAGTACGT 6070 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT GCGGCGGATG AGGAGTACGT 420 AGCCAAGTAT CAATTGGCTA CAAGTCGAAT GAGGGAACTT GATAAAGACC CTTTTGACCC 6010 |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| || ||||||| AGCCAAGTAT CAATTGGCTA CAAGTCGAAT GATGGAACTT GATAAAGACC CTGTTGACCC 480 TCTTGGGTTT AAACAACAAG CTAAT 5985 |||||||||| |||||||||| ||||| TCTTGGGTTT AAACAACAAG CTAAT 505 hqPGS_C08HBa0336I24.1-_SGN-E330622+ (6489 5985) ******************************************************************************** EST sequence 203 +strand 522 n (File: SGN-E328761+) 1 TTCTTCTACT CCTAATACTC TTCCTTTATT ATCCACCAAC AAATCCCTCT CTTCTCCCTT 61 CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA CCTTTCCTCC ATGGAAGGCG 121 CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT GACAAAAACC TTGACGCTGT 181 TGATAGGAGA AATGTTCTTT TAGGGTTATG AGGTTTTTAT GGTGCAGCTA ATCTTGCACC 241 ATTAACCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA TCTTGTGGTG TTGCCCATAT 301 AAATGATAAA GGTACTGAAG TCTCATACAG GTGTTGCCCT CCTGTACCTG ATGATATCGA 361 TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC CGCATCCGCC CCCCTGCTCA 421 TGCGGCGGAT GAGGAGTACG TATCCAAGTA TCAATTGGCT ACAAGTCGAA TGAGGGAACT 481 TGATAAAGAC CCTTTTGACC CTCTTGGGTT TTAACAACAA GC Predicted gene structure (within gDNA segment 7110 to 5280): Exon 1 6510 5989 ( 522 n); cDNA 1 522 ( 522 n); score: 0.989 MATCH C08HBa0336I24.1- SGN-E328761+ 0.989 522 1.000 C PGS_C08HBa0336I24.1-_SGN-E328761+ (6510 5989) Alignment (genomic DNA sequence = upper lines): TTCTTCTACT CCTAATACTC TTCCTTTATT ATCCACCAAC AAATCCCTCT CTTCTCCCTT 6451 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTCTACT CCTAATACTC TTCCTTTATT ATCCACCAAC AAATCCCTCT CTTCTCCCTT 60 CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA CCTTTCCTCC ATGGAAGGCG 6391 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA CCTTTCCTCC ATGGAAGGCG 120 CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT GACAAAAACC TTGACGCTGT 6331 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT GACAAAAACC TTGACGCTGT 180 TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT GGTGCAGCTA ATCTTGCACC 6271 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| TGATAGGAGA AATGTTCTTT TAGGGTTATG AGGTTTTTAT GGTGCAGCTA ATCTTGCACC 240 ATTAGCCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA TCTTGTGGTG TTGCCCATAT 6211 |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAACCTCT GCTGCTCCTA TACCACCACC TGATCTCAAA TCTTGTGGTG TTGCCCATAT 300 AGATGATAAA GGTACTGAAG TCTCATACAG TTGTTGCCCT CCTGTACCTG ATGATATCGA 6151 | |||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| AAATGATAAA GGTACTGAAG TCTCATACAG GTGTTGCCCT CCTGTACCTG ATGATATCGA 360 TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC CGCATCCGCC CCCCTGCTCA 6091 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGCGTTCCG TACTACAAGT TCCCTCCTAT GACGAAACTC CGCATCCGCC CCCCTGCTCA 420 TGCGGCGGAT GAGGAGTACG TAGCCAAGTA TCAATTGGCT ACAAGTCGAA TGAGGGAACT 6031 |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| TGCGGCGGAT GAGGAGTACG TATCCAAGTA TCAATTGGCT ACAAGTCGAA TGAGGGAACT 480 TGATAAAGAC CCTTTTGACC CTCTTGGGTT TAAACAACAA GC 5989 |||||||||| |||||||||| |||||||||| | |||||||| || TGATAAAGAC CCTTTTGACC CTCTTGGGTT TTAACAACAA GC 522 hqPGS_C08HBa0336I24.1-_SGN-E328761+ (6510 5989) ******************************************************************************** EST sequence 301 +strand 502 n (File: SGN-E320580+) 1 TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC TTCACCAACA ACCACTCTAC 61 TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG AGCTGACAAA GTTGCAAGGT 121 TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT GATGATAAGA GAAATGTTCT 181 TTTATGGTTA GGAGGTTTTG TATGGTGCAG CTAATCTTGC ACCATTAACC TCTGCTGCTC 241 CTATACCACC ACCTGATCTC AAATCTTGTG GTGCTGCCCA TATATATGAT AAACGTACTG 301 AACTCTCATA CAGTTGTTGC CCTCCTGTAA CTGATGATAT CGATAGCGTT CCGTACTACA 361 AGTTCCCTCC TATGAAGAAA ATCCGCATCC GCCCCCCTGC TCATGCGGNG GATGAGGAGT 421 ACNTATCCAA CTATCAATTG GGTACCAGTC GAATGAGGGA ACTTGATAAA GACCCGTTTG 481 ACCCTCTTGG GTTTAAACAA CA Predicted gene structure (within gDNA segment 7092 to 5382): Exon 1 6492 5992 ( 501 n); cDNA 1 502 ( 502 n); score: 0.953 MATCH C08HBa0336I24.1- SGN-E320580+ 0.953 501 0.998 C PGS_C08HBa0336I24.1-_SGN-E320580+ (6492 5992) Alignment (genomic DNA sequence = upper lines): TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC TTCACCAACA ACCACTCTAC 6433 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC TTCACCAACA ACCACTCTAC 60 TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG CGCTGTCAAA GTTTCAAGGT 6373 |||||||||| |||||||||| |||||||||| |||||||||| |||| |||| ||| |||||| TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG AGCTGACAAA GTTGCAAGGT 120 TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT GTTGATAGGA GAAATGTTCT 6313 |||||||||| |||||||||| |||||||||| |||||||||| | ||||| || |||||||||| TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT GATGATAAGA GAAATGTTCT 180 TTTAGGGTTA GGAGGTTTT- TATGGTGCAG CTAATCTTGC ACCATTAGCC TCTGCTGCTC 6254 |||| ||||| ||||||||| |||||||||| |||||||||| ||||||| || |||||||||| TTTATGGTTA GGAGGTTTTG TATGGTGCAG CTAATCTTGC ACCATTAACC TCTGCTGCTC 240 CTATACCACC ACCTGATCTC AAATCTTGTG GTGTTGCCCA TATAGATGAT AAAGGTACTG 6194 |||||||||| |||||||||| |||||||||| ||| |||||| |||| ||||| ||| |||||| CTATACCACC ACCTGATCTC AAATCTTGTG GTGCTGCCCA TATATATGAT AAACGTACTG 300 AAGTCTCATA CAGTTGTTGC CCTCCTGTAC CTGATGATAT CGATAGCGTT CCGTACTACA 6134 || ||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| AACTCTCATA CAGTTGTTGC CCTCCTGTAA CTGATGATAT CGATAGCGTT CCGTACTACA 360 AGTTCCCTCC TATGACGAAA CTCCGCATCC GCCCCCCTGC TCATGCGGCG GATGAGGAGT 6074 |||||||||| ||||| |||| ||||||||| |||||||||| |||||||| | |||||||||| AGTTCCCTCC TATGAAGAAA ATCCGCATCC GCCCCCCTGC TCATGCGGNG GATGAGGAGT 420 ACGTAGCCAA GTATCAATTG GCTACAAGTC GAATGAGGGA ACTTGATAAA GACCCTTTTG 6014 || || |||| ||||||||| | ||| |||| |||||||||| |||||||||| ||||| |||| ACNTATCCAA CTATCAATTG GGTACCAGTC GAATGAGGGA ACTTGATAAA GACCCGTTTG 480 ACCCTCTTGG GTTTAAACAA CA 5992 |||||||||| |||||||||| || ACCCTCTTGG GTTTAAACAA CA 502 hqPGS_C08HBa0336I24.1-_SGN-E320580+ (6492 5992) ******************************************************************************** EST sequence 103 +strand 394 n (File: SGN-E202925+) 1 GCACGAGGTC AAAGTTTCAA GGTTTCATGC AACGTTGGCG AGCATGACAA AAACCTTGAC 61 GCTGTTGATA GGAGAAATGT TCTTTTAGGG TTAGGAGGTT TTTATGGTGC AGCTAATCTT 121 GCACCATTAG CCTCTGCTGC TCCTATACCA CCACCTGATC TCAAATCTTG TGGTGTTGCC 181 CATATAGATG ATAAAGGTAC TGAAGTCTCA TACAGTTGTT GCCCTCCTGT ACCTGATGAT 241 ATCGATAGCG TTCCGTACTA CAAGTTCCCT CCTATGACGA AACTCCGCAT CCGCCCCCCT 301 GCTCATGCGG CGGATGAGGA GTACGTAGCC AAGTATCAAT TGGCTACAAG TCGAATGAGG 361 GAACTTGATA AAGACCCTTT TGACCCTCTT GGGT Predicted gene structure (within gDNA segment 7058 to 5392): Exon 1 6392 6002 ( 391 n); cDNA 4 394 ( 391 n); score: 0.995 MATCH C08HBa0336I24.1- SGN-E202925+ 0.995 391 0.992 C PGS_C08HBa0336I24.1-_SGN-E202925+ (6392 6002) Alignment (genomic DNA sequence = upper lines): CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 6333 || |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGAGGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 63 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 6273 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 123 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 6213 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 183 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 6153 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 243 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 6093 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 303 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 6033 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA 363 CTTGATAAAG ACCCTTTTGA CCCTCTTGGG T 6002 |||||||||| |||||||||| |||||||||| | CTTGATAAAG ACCCTTTTGA CCCTCTTGGG T 394 hqPGS_C08HBa0336I24.1-_SGN-E202925+ (6392 6002) ******************************************************************************** EST sequence 77 +strand 504 n (File: SGN-E325113+) 1 TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA GCAAATGGCT CTCTTCTCCC 61 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 121 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 181 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 241 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 301 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 361 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 421 CATGCGGCGG ATGAGGAGTA CCGTAGCCCC CCAGTATCAA TTGGCTACAA GTCGAATGAG 481 GGAACTTGAT AAAGACCCTT TTGA Predicted gene structure (within gDNA segment 7112 to 5403): Exon 1 6512 6013 ( 500 n); cDNA 1 504 ( 504 n); score: 0.972 MATCH C08HBa0336I24.1- SGN-E325113+ 0.972 500 0.992 C PGS_C08HBa0336I24.1-_SGN-E325113+ (6512 6013) Alignment (genomic DNA sequence = upper lines): TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 6453 |||||||||| |||||||||| |||||||||| |||||||||| ||||| || |||||||||| TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA GCAAATGGCT CTCTTCTCCC 60 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 6393 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 120 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 6333 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 180 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 6273 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 240 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 6213 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 300 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 6153 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 360 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 6093 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 420 CATGCGGCGG ATGAGGAGTA -CGTAG---C CAAGTATCAA TTGGCTACAA GTCGAATGAG 6037 |||||||||| |||||||||| ||||| | | |||||||| |||||||||| |||||||||| CATGCGGCGG ATGAGGAGTA CCGTAGCCCC CCAGTATCAA TTGGCTACAA GTCGAATGAG 480 GGAACTTGAT AAAGACCCTT TTGA 6013 |||||||||| |||||||||| |||| GGAACTTGAT AAAGACCCTT TTGA 504 hqPGS_C08HBa0336I24.1-_SGN-E325113+ (6512 6013) ******************************************************************************** EST sequence 246 +strand 481 n (File: SGN-E324169+) 1 TTCTACTCCT AATACTCTTC CTTTATTATC CACCAACAAA TCCCTCTCTT CTCCCTTCAC 61 CAACAACCAC TCTACTTTCT TATCAAAACC CTCTCAACCT TTCCTCCATG GAAAGCGCTG 121 TCAAAGTTTC AAGGTTTCAT GCAACGTTGG CGAGCATGAC AAAAACCTTG ACGCTGTTGA 181 TAGGAGAAAT GTTCTTTTAA GGTTAGGAGG TTTTTATGGT GCAGCTAATC TTGCACCATT 241 AGCCTCTGCT GCTCCTATAC CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA 301 TGATAAAGGT ACTGAAGTCT CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG 361 CGTTCCGTAC TACAAGTTCC CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC 421 GGCGGATGAA GAGTACGTAG CCAAGTATCA ATTGGCTACA AGTCGAATGA AGGAACTTGA 481 T Predicted gene structure (within gDNA segment 7107 to 5318): Exon 1 6507 6027 ( 481 n); cDNA 1 481 ( 481 n); score: 0.992 MATCH C08HBa0336I24.1- SGN-E324169+ 0.992 481 1.000 C PGS_C08HBa0336I24.1-_SGN-E324169+ (6507 6027) Alignment (genomic DNA sequence = upper lines): TTCTACTCCT AATACTCTTC CTTTATTATC CACCAACAAA TCCCTCTCTT CTCCCTTCAC 6448 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTACTCCT AATACTCTTC CTTTATTATC CACCAACAAA TCCCTCTCTT CTCCCTTCAC 60 CAACAACCAC TCTACTTTCT TATCAAAACC CTCTCAACCT TTCCTCCATG GAAGGCGCTG 6388 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| CAACAACCAC TCTACTTTCT TATCAAAACC CTCTCAACCT TTCCTCCATG GAAAGCGCTG 120 TCAAAGTTTC AAGGTTTCAT GCAACGTTGG CGAGCATGAC AAAAACCTTG ACGCTGTTGA 6328 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAAGTTTC AAGGTTTCAT GCAACGTTGG CGAGCATGAC AAAAACCTTG ACGCTGTTGA 180 TAGGAGAAAT GTTCTTTTAG GGTTAGGAGG TTTTTATGGT GCAGCTAATC TTGCACCATT 6268 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGGAGAAAT GTTCTTTTAA GGTTAGGAGG TTTTTATGGT GCAGCTAATC TTGCACCATT 240 AGCCTCTGCT GCTCCTATAC CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA 6208 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCTCTGCT GCTCCTATAC CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA 300 TGATAAAGGT ACTGAAGTCT CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG 6148 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATAAAGGT ACTGAAGTCT CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG 360 CGTTCCGTAC TACAAGTTCC CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC 6088 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTCCGTAC TACAAGTTCC CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC 420 GGCGGATGAG GAGTACGTAG CCAAGTATCA ATTGGCTACA AGTCGAATGA GGGAACTTGA 6028 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| GGCGGATGAA GAGTACGTAG CCAAGTATCA ATTGGCTACA AGTCGAATGA AGGAACTTGA 480 T 6027 | T 481 hqPGS_C08HBa0336I24.1-_SGN-E324169+ (6507 6027) ******************************************************************************** EST sequence 359 +strand 460 n (File: SGN-E311881+) 1 TTTATTATCC ACCAACAAAT CCCTCTCTTC TCCCTTCACC AACAACCACT CTACTTTCTT 61 ATCAAAACCC TCTCAACCTT TCCTCCATGG AAGGCGCTGT CAAAGTTTCA AGGTTTCATG 121 CAACGTTGGC GAGCATGACA AAAACCTTGA CGCTGTTGAT AGGAGAAATG TTCTTTTAGG 181 GTTAGGAGGT TTTTATGGTG CAGCTAATCT TGCACCATTA GCCTCTGCTG CTCCTATACC 241 ACCACCTGAT CTCAAATCTT GTGGTGTTGC CCATATAGAT GATAAAGGTA CTGAAGTCTC 301 ATACAGTTGT TGCCCTCCTG TACCTGATGA TATCGATAGC GTTCCGTACT ACAAGTTCCC 361 TCCTATGACG AAACTCCGCA TCCGCCCCCC TGCTCATGCG GCGGATGAGG AGTACGTAGC 421 CAAGTATCAA TTGGCTACAA GTCGAATGAG GGAACTTGAT Predicted gene structure (within gDNA segment 7086 to 5417): Exon 1 6486 6027 ( 460 n); cDNA 1 460 ( 460 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E311881+ 1.000 460 1.000 C PGS_C08HBa0336I24.1-_SGN-E311881+ (6486 6027) Alignment (genomic DNA sequence = upper lines): TTTATTATCC ACCAACAAAT CCCTCTCTTC TCCCTTCACC AACAACCACT CTACTTTCTT 6427 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTATTATCC ACCAACAAAT CCCTCTCTTC TCCCTTCACC AACAACCACT CTACTTTCTT 60 ATCAAAACCC TCTCAACCTT TCCTCCATGG AAGGCGCTGT CAAAGTTTCA AGGTTTCATG 6367 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCAAAACCC TCTCAACCTT TCCTCCATGG AAGGCGCTGT CAAAGTTTCA AGGTTTCATG 120 CAACGTTGGC GAGCATGACA AAAACCTTGA CGCTGTTGAT AGGAGAAATG TTCTTTTAGG 6307 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACGTTGGC GAGCATGACA AAAACCTTGA CGCTGTTGAT AGGAGAAATG TTCTTTTAGG 180 GTTAGGAGGT TTTTATGGTG CAGCTAATCT TGCACCATTA GCCTCTGCTG CTCCTATACC 6247 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTAGGAGGT TTTTATGGTG CAGCTAATCT TGCACCATTA GCCTCTGCTG CTCCTATACC 240 ACCACCTGAT CTCAAATCTT GTGGTGTTGC CCATATAGAT GATAAAGGTA CTGAAGTCTC 6187 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCACCTGAT CTCAAATCTT GTGGTGTTGC CCATATAGAT GATAAAGGTA CTGAAGTCTC 300 ATACAGTTGT TGCCCTCCTG TACCTGATGA TATCGATAGC GTTCCGTACT ACAAGTTCCC 6127 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATACAGTTGT TGCCCTCCTG TACCTGATGA TATCGATAGC GTTCCGTACT ACAAGTTCCC 360 TCCTATGACG AAACTCCGCA TCCGCCCCCC TGCTCATGCG GCGGATGAGG AGTACGTAGC 6067 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTATGACG AAACTCCGCA TCCGCCCCCC TGCTCATGCG GCGGATGAGG AGTACGTAGC 420 CAAGTATCAA TTGGCTACAA GTCGAATGAG GGAACTTGAT 6027 |||||||||| |||||||||| |||||||||| |||||||||| CAAGTATCAA TTGGCTACAA GTCGAATGAG GGAACTTGAT 460 hqPGS_C08HBa0336I24.1-_SGN-E311881+ (6486 6027) ******************************************************************************** EST sequence 223 +strand 452 n (File: SGN-E323529+) 1 CCACCAACAA ATCCCTCTCT TCTCCCTTCA CCAACAACCA CTCTACTTTC TTATCAAAAC 61 CCTCTCAACC TTTCCTCCAT GGAAGGCGCT GTCAAAGTTT CAAGGTTTCA TGCAACGTTG 121 GCGAGCATGA CAAAAACCTT GACGCTGTTG ATAGGAGAAA TGTTCTTTTA GGGTTAGGAG 181 GTTTTTATGG TGCAGCTAAT CTTGCACCAT TAGCCTCTGC TGCTCCTATA CCACCACCTG 241 ATCTCAAATC TTGTGGTGTT GCCCATATAG ATGATAAAGG TACTGAAGTC TCATACAGTT 301 GTTGCCCTCC TGTACCTGAT GATATCGATA GCGTTCCGTA CTACAAGTTC CCTCCTATGA 361 CGAAACTCCG CATCCGCCCC CCTGCTCATG CGGCGGATGA GGAGTACGTA GCCAAGTATC 421 AATTGGCTAC AAGTCGAATG AGGGAACTTG AT Predicted gene structure (within gDNA segment 7078 to 5417): Exon 1 6478 6027 ( 452 n); cDNA 1 452 ( 452 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E323529+ 1.000 452 1.000 C PGS_C08HBa0336I24.1-_SGN-E323529+ (6478 6027) Alignment (genomic DNA sequence = upper lines): CCACCAACAA ATCCCTCTCT TCTCCCTTCA CCAACAACCA CTCTACTTTC TTATCAAAAC 6419 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCACCAACAA ATCCCTCTCT TCTCCCTTCA CCAACAACCA CTCTACTTTC TTATCAAAAC 60 CCTCTCAACC TTTCCTCCAT GGAAGGCGCT GTCAAAGTTT CAAGGTTTCA TGCAACGTTG 6359 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCTCAACC TTTCCTCCAT GGAAGGCGCT GTCAAAGTTT CAAGGTTTCA TGCAACGTTG 120 GCGAGCATGA CAAAAACCTT GACGCTGTTG ATAGGAGAAA TGTTCTTTTA GGGTTAGGAG 6299 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGAGCATGA CAAAAACCTT GACGCTGTTG ATAGGAGAAA TGTTCTTTTA GGGTTAGGAG 180 GTTTTTATGG TGCAGCTAAT CTTGCACCAT TAGCCTCTGC TGCTCCTATA CCACCACCTG 6239 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTTTATGG TGCAGCTAAT CTTGCACCAT TAGCCTCTGC TGCTCCTATA CCACCACCTG 240 ATCTCAAATC TTGTGGTGTT GCCCATATAG ATGATAAAGG TACTGAAGTC TCATACAGTT 6179 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCTCAAATC TTGTGGTGTT GCCCATATAG ATGATAAAGG TACTGAAGTC TCATACAGTT 300 GTTGCCCTCC TGTACCTGAT GATATCGATA GCGTTCCGTA CTACAAGTTC CCTCCTATGA 6119 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGCCCTCC TGTACCTGAT GATATCGATA GCGTTCCGTA CTACAAGTTC CCTCCTATGA 360 CGAAACTCCG CATCCGCCCC CCTGCTCATG CGGCGGATGA GGAGTACGTA GCCAAGTATC 6059 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGAAACTCCG CATCCGCCCC CCTGCTCATG CGGCGGATGA GGAGTACGTA GCCAAGTATC 420 AATTGGCTAC AAGTCGAATG AGGGAACTTG AT 6027 |||||||||| |||||||||| |||||||||| || AATTGGCTAC AAGTCGAATG AGGGAACTTG AT 452 hqPGS_C08HBa0336I24.1-_SGN-E323529+ (6478 6027) ******************************************************************************** EST sequence 300 +strand 465 n (File: SGN-E320343+) 1 TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC TTCTCCAACA ACCACTCTAC 61 TTTCTTATCA AAAGCCTCTC AACCTTTCCT CCATGGAAGG CGCTGTCAAA GTTTCAAGGA 121 TTCATGCAAC GTTGGCGATC ATGACAAAAA CCTTGACGCT GTTGATAAGA GAAATGTTCT 181 TTTATGGTTA GGAGGGTTTT ATGGTGCAAC TAATCATGCA CCATTAACCT CTGCTGCTCC 241 TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT ATAGATGATA AAGGTACTGA 301 AGTCTCATAC AGTTGTTGCC CTCCTGGACC TGATGATATC GATAGCGATA CTGACTACGA 361 GTTCCCTCCT ATGACGAAAC TCCGCATCAG CCACCCTGCT CATGCGGCGG ATGACGAGTA 421 CGTAACCAAG TATCAATTGG CTACAAGACG AATGAGGGAA CTTGA Predicted gene structure (within gDNA segment 7092 to 5418): Exon 1 6492 6028 ( 465 n); cDNA 1 465 ( 465 n); score: 0.955 MATCH C08HBa0336I24.1- SGN-E320343+ 0.955 465 1.000 C PGS_C08HBa0336I24.1-_SGN-E320343+ (6492 6028) Alignment (genomic DNA sequence = upper lines): TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC TTCACCAACA ACCACTCTAC 6433 |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC TTCTCCAACA ACCACTCTAC 60 TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG CGCTGTCAAA GTTTCAAGGT 6373 |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| ||||||||| TTTCTTATCA AAAGCCTCTC AACCTTTCCT CCATGGAAGG CGCTGTCAAA GTTTCAAGGA 120 TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT GTTGATAGGA GAAATGTTCT 6313 |||||||||| |||||||| | |||||||||| |||||||||| ||||||| || |||||||||| TTCATGCAAC GTTGGCGATC ATGACAAAAA CCTTGACGCT GTTGATAAGA GAAATGTTCT 180 TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA CCATTAGCCT CTGCTGCTCC 6253 |||| ||||| ||||| |||| |||||||| | ||||| |||| |||||| ||| |||||||||| TTTATGGTTA GGAGGGTTTT ATGGTGCAAC TAATCATGCA CCATTAACCT CTGCTGCTCC 240 TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT ATAGATGATA AAGGTACTGA 6193 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT ATAGATGATA AAGGTACTGA 300 AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC GATAGCGTTC CGTACTACAA 6133 |||||||||| |||||||||| |||||| ||| |||||||||| ||||||| | | ||||| | AGTCTCATAC AGTTGTTGCC CTCCTGGACC TGATGATATC GATAGCGATA CTGACTACGA 360 GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT CATGCGGCGG ATGAGGAGTA 6073 |||||||||| |||||||||| |||||||| | || ||||||| |||||||||| |||| ||||| GTTCCCTCCT ATGACGAAAC TCCGCATCAG CCACCCTGCT CATGCGGCGG ATGACGAGTA 420 CGTAGCCAAG TATCAATTGG CTACAAGTCG AATGAGGGAA CTTGA 6028 |||| ||||| |||||||||| ||||||| || |||||||||| ||||| CGTAACCAAG TATCAATTGG CTACAAGACG AATGAGGGAA CTTGA 465 hqPGS_C08HBa0336I24.1-_SGN-E320343+ (6492 6028) ******************************************************************************** EST sequence 366 +strand 474 n (File: SGN-E313751+) 1 TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 61 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 121 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 181 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 241 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 301 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 361 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 421 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATG Predicted gene structure (within gDNA segment 7112 to 5429): Exon 1 6512 6039 ( 474 n); cDNA 1 474 ( 474 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E313751+ 1.000 474 1.000 C PGS_C08HBa0336I24.1-_SGN-E313751+ (6512 6039) Alignment (genomic DNA sequence = upper lines): TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 6453 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 60 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 6393 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 120 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 6333 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 180 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 6273 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 240 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 6213 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 300 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 6153 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 360 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 6093 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 420 CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATG 6039 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| CATGCGGCGG ATGAGGAGTA CGTAGCCAAG TATCAATTGG CTACAAGTCG AATG 474 hqPGS_C08HBa0336I24.1-_SGN-E313751+ (6512 6039) ******************************************************************************** EST sequence 282 +strand 470 n (File: SGN-E319313+) 1 TCTTCTACTC CTAATACTCT TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTCCCTTC 61 ACCAACAACC ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC 121 TGTCAAAGTT TCAAGGTTTC ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT 181 GATAGGAGAA ATGTTCTTTT AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA 241 TTAGCCTCTG CTGCTCCTAT ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA 301 GATGATAAAG GTACTGAAGT CTCATACAGT TGTTGCCCTC CTGTACCTGA TGATATCGAT 361 AGCGTTCCGT ACTACAAGTT CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT 421 GCGGCGGATG AGGAGTACGT AGCCAAGTAT CAATTGGCTA CAAGTCGAAT Predicted gene structure (within gDNA segment 7109 to 5430): Exon 1 6509 6040 ( 470 n); cDNA 1 470 ( 470 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E319313+ 1.000 470 1.000 C PGS_C08HBa0336I24.1-_SGN-E319313+ (6509 6040) Alignment (genomic DNA sequence = upper lines): TCTTCTACTC CTAATACTCT TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTCCCTTC 6450 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTCTACTC CTAATACTCT TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTCCCTTC 60 ACCAACAACC ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC 6390 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAACAACC ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC 120 TGTCAAAGTT TCAAGGTTTC ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT 6330 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTCAAAGTT TCAAGGTTTC ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT 180 GATAGGAGAA ATGTTCTTTT AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA 6270 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAGGAGAA ATGTTCTTTT AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA 240 TTAGCCTCTG CTGCTCCTAT ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA 6210 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAGCCTCTG CTGCTCCTAT ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA 300 GATGATAAAG GTACTGAAGT CTCATACAGT TGTTGCCCTC CTGTACCTGA TGATATCGAT 6150 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGATAAAG GTACTGAAGT CTCATACAGT TGTTGCCCTC CTGTACCTGA TGATATCGAT 360 AGCGTTCCGT ACTACAAGTT CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT 6090 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCGTTCCGT ACTACAAGTT CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT 420 GCGGCGGATG AGGAGTACGT AGCCAAGTAT CAATTGGCTA CAAGTCGAAT 6040 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGGCGGATG AGGAGTACGT AGCCAAGTAT CAATTGGCTA CAAGTCGAAT 470 hqPGS_C08HBa0336I24.1-_SGN-E319313+ (6509 6040) ******************************************************************************** EST sequence 244 +strand 440 n (File: SGN-E312841+) 1 TCCACCAACT AATCCCTCTC TTCTCCCTTC ACCAACAACC ACTCTACTTT CTTATCAAAA 61 CCCTCTCAAC CTTTCCTCCA TGGAAAGCGC TGTCAAAGTT TCAAGGTTTC ATGCAACGTT 121 GGCGAGCATG ACAAAAACCT TGACGCTGTT GATAGGAGAA ATGTTCTTTT AGGGTTAGGA 181 GGTTTTTATG GAGCAGCTAA TCTTGCACCA TTAGCCTCTG CTGCTCCTAT ACCACCACCT 241 GATCTCAAAT CTTGTGGTGT TGCCCATATA GATGATAAAG GTACTGAAGT CTCATACAGT 301 TGTTGCCCTC CTGTACCTGA TGATATCGAT AGCGTTCCGT ACTACAAGTT CCCTCCTATG 361 ACGAAACTCC GCATCCGCCC CCCTGCTCAT GCGGCGGATG AGGAGTACGT AGCCAAGTAT 421 CAATTGGCTA CAAGTCGAAT Predicted gene structure (within gDNA segment 7169 to 5430): Exon 1 6479 6040 ( 440 n); cDNA 1 440 ( 440 n); score: 0.993 MATCH C08HBa0336I24.1- SGN-E312841+ 0.993 440 1.000 C PGS_C08HBa0336I24.1-_SGN-E312841+ (6479 6040) Alignment (genomic DNA sequence = upper lines): TCCACCAACA AATCCCTCTC TTCTCCCTTC ACCAACAACC ACTCTACTTT CTTATCAAAA 6420 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCACCAACT AATCCCTCTC TTCTCCCTTC ACCAACAACC ACTCTACTTT CTTATCAAAA 60 CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC TGTCAAAGTT TCAAGGTTTC ATGCAACGTT 6360 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| CCCTCTCAAC CTTTCCTCCA TGGAAAGCGC TGTCAAAGTT TCAAGGTTTC ATGCAACGTT 120 GGCGAGCATG ACAAAAACCT TGACGCTGTT GATAGGAGAA ATGTTCTTTT AGGGTTAGGA 6300 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCGAGCATG ACAAAAACCT TGACGCTGTT GATAGGAGAA ATGTTCTTTT AGGGTTAGGA 180 GGTTTTTATG GTGCAGCTAA TCTTGCACCA TTAGCCTCTG CTGCTCCTAT ACCACCACCT 6240 |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTTTTTATG GAGCAGCTAA TCTTGCACCA TTAGCCTCTG CTGCTCCTAT ACCACCACCT 240 GATCTCAAAT CTTGTGGTGT TGCCCATATA GATGATAAAG GTACTGAAGT CTCATACAGT 6180 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATCTCAAAT CTTGTGGTGT TGCCCATATA GATGATAAAG GTACTGAAGT CTCATACAGT 300 TGTTGCCCTC CTGTACCTGA TGATATCGAT AGCGTTCCGT ACTACAAGTT CCCTCCTATG 6120 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTGCCCTC CTGTACCTGA TGATATCGAT AGCGTTCCGT ACTACAAGTT CCCTCCTATG 360 ACGAAACTCC GCATCCGCCC CCCTGCTCAT GCGGCGGATG AGGAGTACGT AGCCAAGTAT 6060 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACGAAACTCC GCATCCGCCC CCCTGCTCAT GCGGCGGATG AGGAGTACGT AGCCAAGTAT 420 CAATTGGCTA CAAGTCGAAT 6040 |||||||||| |||||||||| CAATTGGCTA CAAGTCGAAT 440 hqPGS_C08HBa0336I24.1-_SGN-E312841+ (6479 6040) ******************************************************************************** EST sequence 364 +strand 475 n (File: SGN-E313746+) 1 CAATGTCTTC TTCTACTCCT AATACTCTTC CTTTATTATC CACCAACAAA TCCCTCTCTT 61 CTCCCTTCAC CAACAACCAC TCTACTTTCT TATCAAAACC CTCTCAACCT TTCCTCCATG 121 GAAGGCGCTG TCAAAGTTTC AAGGTTTCAT GCAACGTTGG CGAGCATGAC AAAAACCTTG 181 ACGCTGTTGA TAGGAGAAAT GTTCTTTTAG GGTTAGGAGG TTTTTATGGT GCAGCTAATC 241 TTGCACCATT AGCCTCTGCT GCTCCTATAC CACCACCTGA TCTCAAATCT TGTGGTGTTG 301 CCCATATAGA TGATAAAGGT ACTGAAGTCT CATACAGTTG TTGCCCTCCT GTACCTGATG 361 ATATCGATAG CGTTCCGTAC TACAAGTTCC CTCCTATGAC GAAACTCCGC ATCCGCCCCC 421 CTGCTCATGC GGCGGATGAG GAGTACGTAG CCAAGTATCA ATTGGCTACA AGTCG Predicted gene structure (within gDNA segment 7117 to 5433): Exon 1 6517 6043 ( 475 n); cDNA 1 475 ( 475 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E313746+ 1.000 475 1.000 C PGS_C08HBa0336I24.1-_SGN-E313746+ (6517 6043) Alignment (genomic DNA sequence = upper lines): CAATGTCTTC TTCTACTCCT AATACTCTTC CTTTATTATC CACCAACAAA TCCCTCTCTT 6458 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAATGTCTTC TTCTACTCCT AATACTCTTC CTTTATTATC CACCAACAAA TCCCTCTCTT 60 CTCCCTTCAC CAACAACCAC TCTACTTTCT TATCAAAACC CTCTCAACCT TTCCTCCATG 6398 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCCCTTCAC CAACAACCAC TCTACTTTCT TATCAAAACC CTCTCAACCT TTCCTCCATG 120 GAAGGCGCTG TCAAAGTTTC AAGGTTTCAT GCAACGTTGG CGAGCATGAC AAAAACCTTG 6338 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGGCGCTG TCAAAGTTTC AAGGTTTCAT GCAACGTTGG CGAGCATGAC AAAAACCTTG 180 ACGCTGTTGA TAGGAGAAAT GTTCTTTTAG GGTTAGGAGG TTTTTATGGT GCAGCTAATC 6278 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACGCTGTTGA TAGGAGAAAT GTTCTTTTAG GGTTAGGAGG TTTTTATGGT GCAGCTAATC 240 TTGCACCATT AGCCTCTGCT GCTCCTATAC CACCACCTGA TCTCAAATCT TGTGGTGTTG 6218 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCACCATT AGCCTCTGCT GCTCCTATAC CACCACCTGA TCTCAAATCT TGTGGTGTTG 300 CCCATATAGA TGATAAAGGT ACTGAAGTCT CATACAGTTG TTGCCCTCCT GTACCTGATG 6158 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCATATAGA TGATAAAGGT ACTGAAGTCT CATACAGTTG TTGCCCTCCT GTACCTGATG 360 ATATCGATAG CGTTCCGTAC TACAAGTTCC CTCCTATGAC GAAACTCCGC ATCCGCCCCC 6098 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATCGATAG CGTTCCGTAC TACAAGTTCC CTCCTATGAC GAAACTCCGC ATCCGCCCCC 420 CTGCTCATGC GGCGGATGAG GAGTACGTAG CCAAGTATCA ATTGGCTACA AGTCG 6043 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| CTGCTCATGC GGCGGATGAG GAGTACGTAG CCAAGTATCA ATTGGCTACA AGTCG 475 hqPGS_C08HBa0336I24.1-_SGN-E313746+ (6517 6043) ******************************************************************************** EST sequence 240 +strand 439 n (File: SGN-E311565+) 1 TTCTACTCCT AATACTCTTC CTTTATTATC CACCAACAAA TCCCTCTCTT CTCCCTTCAC 61 CAACAACCAC TCTACTTTCT TATCAAAACC CTCTCAACCT TTCCTCCATG GAAGGCGCTG 121 TCAAAGTTTC AAGGTTTCAT GCAACGTTGG CGAGCATGAC AAAAACCTTG ACGCTGTTGA 181 TAGGAGAAAT GTTCTTTTAG GGTTAGGAGG TTTTTATGGT GCAGCTAATC TTGCACCATT 241 AGCCTCTGCT GCTCCTATAC CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA 301 TGATAAAGGT ACTGAAGTCT CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG 361 CGTTCCGTAC TACAAGTTCC CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC 421 GGCGGATGAG GAGTACGTA Predicted gene structure (within gDNA segment 7107 to 5459): Exon 1 6507 6069 ( 439 n); cDNA 1 439 ( 439 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E311565+ 1.000 439 1.000 C PGS_C08HBa0336I24.1-_SGN-E311565+ (6507 6069) Alignment (genomic DNA sequence = upper lines): TTCTACTCCT AATACTCTTC CTTTATTATC CACCAACAAA TCCCTCTCTT CTCCCTTCAC 6448 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTACTCCT AATACTCTTC CTTTATTATC CACCAACAAA TCCCTCTCTT CTCCCTTCAC 60 CAACAACCAC TCTACTTTCT TATCAAAACC CTCTCAACCT TTCCTCCATG GAAGGCGCTG 6388 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACAACCAC TCTACTTTCT TATCAAAACC CTCTCAACCT TTCCTCCATG GAAGGCGCTG 120 TCAAAGTTTC AAGGTTTCAT GCAACGTTGG CGAGCATGAC AAAAACCTTG ACGCTGTTGA 6328 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAAGTTTC AAGGTTTCAT GCAACGTTGG CGAGCATGAC AAAAACCTTG ACGCTGTTGA 180 TAGGAGAAAT GTTCTTTTAG GGTTAGGAGG TTTTTATGGT GCAGCTAATC TTGCACCATT 6268 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGGAGAAAT GTTCTTTTAG GGTTAGGAGG TTTTTATGGT GCAGCTAATC TTGCACCATT 240 AGCCTCTGCT GCTCCTATAC CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA 6208 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCTCTGCT GCTCCTATAC CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA 300 TGATAAAGGT ACTGAAGTCT CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG 6148 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATAAAGGT ACTGAAGTCT CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG 360 CGTTCCGTAC TACAAGTTCC CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC 6088 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTCCGTAC TACAAGTTCC CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC 420 GGCGGATGAG GAGTACGTA 6069 |||||||||| ||||||||| GGCGGATGAG GAGTACGTA 439 hqPGS_C08HBa0336I24.1-_SGN-E311565+ (6507 6069) ******************************************************************************** EST sequence 242 +strand 435 n (File: SGN-E311538+) 1 TGTCTTCTTC TACTCCTAAT ACTCTTCCTT TATTATCCAC CAACAAATCC CTCTCTTCTC 61 CCTTCACCAA CAACCACTCT ACTTTCTTAT CAAAACCCTC TCAACCTTTC CTCCATGGAA 121 GGCGCTGTCA AAGTTTCAAG GTTTCATGCA ACGTTGGCGA GCATGACAAA AACCTTGACG 181 CTGTTGATAG GAGAAATGTT CTTTTAGGGT TAGGAGGTTT TTATGGTGCA GCTAATCTTG 241 CACCATTAGC CTCTGCTGCT CCTATACCAC CACCTGATCT CAAATCTTGT GGTGTTGCCC 301 ATATAGATGA TAAAGGTACT GAAGTCTCAT ACAGTTGTTG CCCTCCTGTA CCTGATGATA 361 TCGATAGCGT TCCGTACTAC AAGTTCCCTC CTATGACGAA ACTCCGCATC CGCCCCCCTG 421 CTCATGCGGC GGATG Predicted gene structure (within gDNA segment 7114 to 5470): Exon 1 6514 6080 ( 435 n); cDNA 1 435 ( 435 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E311538+ 1.000 435 1.000 C PGS_C08HBa0336I24.1-_SGN-E311538+ (6514 6080) Alignment (genomic DNA sequence = upper lines): TGTCTTCTTC TACTCCTAAT ACTCTTCCTT TATTATCCAC CAACAAATCC CTCTCTTCTC 6455 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTCTTCTTC TACTCCTAAT ACTCTTCCTT TATTATCCAC CAACAAATCC CTCTCTTCTC 60 CCTTCACCAA CAACCACTCT ACTTTCTTAT CAAAACCCTC TCAACCTTTC CTCCATGGAA 6395 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTCACCAA CAACCACTCT ACTTTCTTAT CAAAACCCTC TCAACCTTTC CTCCATGGAA 120 GGCGCTGTCA AAGTTTCAAG GTTTCATGCA ACGTTGGCGA GCATGACAAA AACCTTGACG 6335 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCGCTGTCA AAGTTTCAAG GTTTCATGCA ACGTTGGCGA GCATGACAAA AACCTTGACG 180 CTGTTGATAG GAGAAATGTT CTTTTAGGGT TAGGAGGTTT TTATGGTGCA GCTAATCTTG 6275 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTTGATAG GAGAAATGTT CTTTTAGGGT TAGGAGGTTT TTATGGTGCA GCTAATCTTG 240 CACCATTAGC CTCTGCTGCT CCTATACCAC CACCTGATCT CAAATCTTGT GGTGTTGCCC 6215 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCATTAGC CTCTGCTGCT CCTATACCAC CACCTGATCT CAAATCTTGT GGTGTTGCCC 300 ATATAGATGA TAAAGGTACT GAAGTCTCAT ACAGTTGTTG CCCTCCTGTA CCTGATGATA 6155 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATAGATGA TAAAGGTACT GAAGTCTCAT ACAGTTGTTG CCCTCCTGTA CCTGATGATA 360 TCGATAGCGT TCCGTACTAC AAGTTCCCTC CTATGACGAA ACTCCGCATC CGCCCCCCTG 6095 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGATAGCGT TCCGTACTAC AAGTTCCCTC CTATGACGAA ACTCCGCATC CGCCCCCCTG 420 CTCATGCGGC GGATG 6080 |||||||||| ||||| CTCATGCGGC GGATG 435 hqPGS_C08HBa0336I24.1-_SGN-E311538+ (6514 6080) ******************************************************************************** EST sequence 349 +strand 433 n (File: SGN-E313063+) 1 TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 61 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 121 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 181 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 241 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 301 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 361 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 421 CATGCGGCGG ATG Predicted gene structure (within gDNA segment 7112 to 5470): Exon 1 6512 6080 ( 433 n); cDNA 1 433 ( 433 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E313063+ 1.000 433 1.000 C PGS_C08HBa0336I24.1-_SGN-E313063+ (6512 6080) Alignment (genomic DNA sequence = upper lines): TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 6453 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTCTTCTA CTCCTAATAC TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC 60 TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 6393 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCACCAACA ACCACTCTAC TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG 120 CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 6333 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTGTCAAA GTTTCAAGGT TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT 180 GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 6273 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 240 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 6213 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 300 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 6153 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 360 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 6093 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 420 CATGCGGCGG ATG 6080 |||||||||| ||| CATGCGGCGG ATG 433 hqPGS_C08HBa0336I24.1-_SGN-E313063+ (6512 6080) ******************************************************************************** EST sequence 61 +strand 425 n (File: SGN-E324882+) 1 TACTCCTAAT ACTCTTCCTT TATTATCCAC CAACGAATCC TTCTCTTCTC CCTTGACCAA 61 CAACCACTCT ACTTTCTTAT CAAAACCCTC TCAACCTTTC CTCCATGGAA GGCGCTGTCA 121 AAGTTTCAAG GTTTCATGCA ACGTTGGCGA GCATGACAAA AACCTTGACG CTGTTGATAG 181 GAGAAATGTT CTTTTAGGGT TAGGAGGTTT TTATGGTGCA GCTAATCTTG CACCATTAGC 241 CTCTGCTGCT CCTATACCAC CACCTGATCT CAAATCTTGT GGTGTTGCCC ATATAGATGA 301 TAAAGGTACT GAAGTCTCAT ACAGTTGTTG CCCTCCTGTA CCTGATGATA TCGATAGCGT 361 TCCGTACTAC AAGTTCCCTC CTATGACGAA ACTTCGCATC CGCCCCCCTG CTCATGCGGC 421 GGATG Predicted gene structure (within gDNA segment 7104 to 5470): Exon 1 6504 6080 ( 425 n); cDNA 1 425 ( 425 n); score: 0.991 MATCH C08HBa0336I24.1- SGN-E324882+ 0.991 425 1.000 C PGS_C08HBa0336I24.1-_SGN-E324882+ (6504 6080) Alignment (genomic DNA sequence = upper lines): TACTCCTAAT ACTCTTCCTT TATTATCCAC CAACAAATCC CTCTCTTCTC CCTTCACCAA 6445 |||||||||| |||||||||| |||||||||| |||| ||||| ||||||||| |||| ||||| TACTCCTAAT ACTCTTCCTT TATTATCCAC CAACGAATCC TTCTCTTCTC CCTTGACCAA 60 CAACCACTCT ACTTTCTTAT CAAAACCCTC TCAACCTTTC CTCCATGGAA GGCGCTGTCA 6385 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACCACTCT ACTTTCTTAT CAAAACCCTC TCAACCTTTC CTCCATGGAA GGCGCTGTCA 120 AAGTTTCAAG GTTTCATGCA ACGTTGGCGA GCATGACAAA AACCTTGACG CTGTTGATAG 6325 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTTTCAAG GTTTCATGCA ACGTTGGCGA GCATGACAAA AACCTTGACG CTGTTGATAG 180 GAGAAATGTT CTTTTAGGGT TAGGAGGTTT TTATGGTGCA GCTAATCTTG CACCATTAGC 6265 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGAAATGTT CTTTTAGGGT TAGGAGGTTT TTATGGTGCA GCTAATCTTG CACCATTAGC 240 CTCTGCTGCT CCTATACCAC CACCTGATCT CAAATCTTGT GGTGTTGCCC ATATAGATGA 6205 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCTGCTGCT CCTATACCAC CACCTGATCT CAAATCTTGT GGTGTTGCCC ATATAGATGA 300 TAAAGGTACT GAAGTCTCAT ACAGTTGTTG CCCTCCTGTA CCTGATGATA TCGATAGCGT 6145 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAGGTACT GAAGTCTCAT ACAGTTGTTG CCCTCCTGTA CCTGATGATA TCGATAGCGT 360 TCCGTACTAC AAGTTCCCTC CTATGACGAA ACTCCGCATC CGCCCCCCTG CTCATGCGGC 6085 |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| TCCGTACTAC AAGTTCCCTC CTATGACGAA ACTTCGCATC CGCCCCCCTG CTCATGCGGC 420 GGATG 6080 ||||| GGATG 425 hqPGS_C08HBa0336I24.1-_SGN-E324882+ (6504 6080) ******************************************************************************** EST sequence 340 +strand 428 n (File: SGN-E313346+) 1 GTTCTACTCC TAATACTCTT CCTTTATTAT CCACCAACAA ATCCCTCTCT TCTCCCTTCA 61 CCAACAACCA CTCTACTTTC TTATCAAAAC CCTCTCAACC TTTCCTCCAT GGAAGGCGCT 121 GTCAAAGTTT CAAGGTTTCA TGCAACGTTG GCGAGCATGA CAAAAACCTT GACGCTGTTG 181 ATAGGAGAAA TGTTCTCTTA GGGTTAGGAG GTTTTTATGG TGCAGCTAAT CTTGCACCAT 241 TAGCCTCTGC TGCTCCTATA CCACCACCTG ATCTCAAATC TTGTGGTGTT GCCCATATAG 301 ATGATAAAGG TACTGAAGTC TCATACAGTT GTTGCCCTCC TGTACCTGAT GATATCGATA 361 GCGTTCCGTA CTACAAGTTC CCTCCTATGA CGAAACTCCG CATCCGCCCC CCTGCTCATG 421 CGGCGGAT Predicted gene structure (within gDNA segment 7117 to 5471): Exon 1 6507 6081 ( 427 n); cDNA 2 428 ( 427 n); score: 0.998 MATCH C08HBa0336I24.1- SGN-E313346+ 0.998 427 0.998 C PGS_C08HBa0336I24.1-_SGN-E313346+ (6507 6081) Alignment (genomic DNA sequence = upper lines): TTCTACTCCT AATACTCTTC CTTTATTATC CACCAACAAA TCCCTCTCTT CTCCCTTCAC 6448 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTACTCCT AATACTCTTC CTTTATTATC CACCAACAAA TCCCTCTCTT CTCCCTTCAC 61 CAACAACCAC TCTACTTTCT TATCAAAACC CTCTCAACCT TTCCTCCATG GAAGGCGCTG 6388 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACAACCAC TCTACTTTCT TATCAAAACC CTCTCAACCT TTCCTCCATG GAAGGCGCTG 121 TCAAAGTTTC AAGGTTTCAT GCAACGTTGG CGAGCATGAC AAAAACCTTG ACGCTGTTGA 6328 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAAGTTTC AAGGTTTCAT GCAACGTTGG CGAGCATGAC AAAAACCTTG ACGCTGTTGA 181 TAGGAGAAAT GTTCTTTTAG GGTTAGGAGG TTTTTATGGT GCAGCTAATC TTGCACCATT 6268 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| TAGGAGAAAT GTTCTCTTAG GGTTAGGAGG TTTTTATGGT GCAGCTAATC TTGCACCATT 241 AGCCTCTGCT GCTCCTATAC CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA 6208 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCTCTGCT GCTCCTATAC CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA 301 TGATAAAGGT ACTGAAGTCT CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG 6148 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATAAAGGT ACTGAAGTCT CATACAGTTG TTGCCCTCCT GTACCTGATG ATATCGATAG 361 CGTTCCGTAC TACAAGTTCC CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC 6088 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTCCGTAC TACAAGTTCC CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATGC 421 GGCGGAT 6081 ||||||| GGCGGAT 428 hqPGS_C08HBa0336I24.1-_SGN-E313346+ (6507 6081) ******************************************************************************** EST sequence 94 +strand 416 n (File: SGN-E326402+) 1 TTACTACTAC TCTTCCTTTA TGCACCAGCA AATCTTTCTA TTATTCCTTC ACCACCACCA 61 ACTCATCCTT GTTATCAAAA CCCTCTCAAC TTTTCCTCCA CCGAAGGCGT AATCAAAGTT 121 TCAAGGTTTC ATGCAACGCA AACAACGTTG ACAAAAACCC TGACGCTGTT GATAGACGAA 181 ACGTTCTTTT AGGGTTAGGA GGTCTTTATG GTGCAGCTAA TCTTGCACCA TTAGCGACTG 241 CTGCACCTAT ACCACCTCCT GATCTCAAGT CTTGTGGTAC TGCCCATGTA AAAGAAGGTG 301 TTGATGTAAT ATACAGTTGT TGCCCTCCTG TACCCGATGA TATCGATAGT GTTCCGTACT 361 ACAAGTTCCC TTCTATGACT AAACTCCGCA TCCGCCCCCC TGCTCATGCG GCGGAT Predicted gene structure (within gDNA segment 8737 to 5471): Exon 1 6498 6081 ( 418 n); cDNA 2 416 ( 415 n); score: 0.849 MATCH C08HBa0336I24.1- SGN-E326402+ 0.849 418 1.005 C PGS_C08HBa0336I24.1-_SGN-E326402+ (6498 6081) Alignment (genomic DNA sequence = upper lines): TAATACTCTT CCTTTATTAT CCACCAACAA ATCCCTCTCT TCTCCCTTCA CCAACAACCA 6439 || |||| | | | |||| ||||| ||| ||| ||| | | | |||||| ||| || | | TACTACTACT CTTCCTTTAT GCACCAGCAA ATCTTTCTAT TATTCCTTCA CCACCACCAA 61 CTCTACTTTC TTATCAAAAC CCTCTCAACC TTTCCTCCAT GGAAGGCGCT GTCAAAGTTT 6379 ||| | || |||||||||| ||||||||| ||||||||| ||||||| ||||||||| CTCATCCTTG TTATCAAAAC CCTCTCAACT TTTCCTCCAC CGAAGGCGTA ATCAAAGTTT 121 CAAGGTTTCA TGCAACGTTG GCGAGCATGA CAAAAACCTT GACGCTGTTG ATAGGAGAAA 6319 |||||||||| ||||||| | | ||| |||||||| | |||||||||| |||| |||| CAAGGTTTCA TGCAACGCAA ACAACGTTGA CAAAAACCCT GACGCTGTTG ATAGACGAAA 181 TGTTCTTTTA GGGTTAGGAG GTTTTTATGG TGCAGCTAAT CTTGCACCAT TAGCCTCTGC 6259 ||||||||| |||||||||| || ||||||| |||||||||| |||||||||| |||| |||| CGTTCTTTTA GGGTTAGGAG GTCTTTATGG TGCAGCTAAT CTTGCACCAT TAGCGACTGC 241 TGCTCCTATA CCACCACCTG ATCTCAAATC TTGTGGTGTT GCCCATATAG ATGATAAAGG 6199 ||| |||||| ||||| |||| ||||||| || ||||||| | |||||| || | | |||| TGCACCTATA CCACCTCCTG ATCTCAAGTC TTGTGGTACT GCCCATGTA- A--AAGAAGG 298 TACTGAAGTC TCATACAGTT GTTGCCCTCC TGTACCTGAT GATATCGATA GCGTTCCGTA 6139 | ||| || |||||||| |||||||||| |||||| ||| |||||||||| | |||||||| TGTTGATGTA ATATACAGTT GTTGCCCTCC TGTACCCGAT GATATCGATA GTGTTCCGTA 358 CTACAAGTTC CCTCCTATGA CGAAACTCCG CATCCGCCCC CCTGCTCATG CGGCGGAT 6081 |||||||||| ||| |||||| | |||||||| |||||||||| |||||||||| |||||||| CTACAAGTTC CCTTCTATGA CTAAACTCCG CATCCGCCCC CCTGCTCATG CGGCGGAT 416 hqPGS_C08HBa0336I24.1-_SGN-E326402+ (6498 6081) ******************************************************************************** EST sequence 156 +strand 371 n (File: SGN-E325498+) 1 TCCCTTCACC AACAACCACT CTACTTTCTT ATCAAAACCC TCTCAACCTT TCCTCATGGA 61 AGGCGCTGCA AAGTTCAAGG TTTCATGCAA CGTTGGCGAG CATGACAAAA ACCTTGACGC 121 TGTGATAGGA GAAATGTTCT TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA 181 CCATTAGCCT CTGCTGCTCC TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT 241 ATAGATGATA AAGGTACTGA AGTCTCATAC AGTTGTTGCC CTCCTGTACC TGATGATATC 301 GATAGCGTTC CGTACTACAA GTTCCCTCCT ATGACGAAAC TCCGCATCCG CCCCCCTGCT 361 CATGCGGCGG A Predicted gene structure (within gDNA segment 7056 to 5472): Exon 1 6456 6082 ( 375 n); cDNA 1 371 ( 371 n); score: 0.989 MATCH C08HBa0336I24.1- SGN-E325498+ 0.989 375 1.011 C PGS_C08HBa0336I24.1-_SGN-E325498+ (6456 6082) Alignment (genomic DNA sequence = upper lines): TCCCTTCACC AACAACCACT CTACTTTCTT ATCAAAACCC TCTCAACCTT TCCTCCATGG 6397 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| TCCCTTCACC AACAACCACT CTACTTTCTT ATCAAAACCC TCTCAACCTT TCCT-CATGG 59 AAGGCGCTGT CAAAGTTTCA AGGTTTCATG CAACGTTGGC GAGCATGACA AAAACCTTGA 6337 ||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGCGCTG- CAAAG-TTCA AGGTTTCATG CAACGTTGGC GAGCATGACA AAAACCTTGA 117 CGCTGTTGAT AGGAGAAATG TTCTTTTAGG GTTAGGAGGT TTTTATGGTG CAGCTAATCT 6277 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTG-TGAT AGGAGAAATG TTCTTTTAGG GTTAGGAGGT TTTTATGGTG CAGCTAATCT 176 TGCACCATTA GCCTCTGCTG CTCCTATACC ACCACCTGAT CTCAAATCTT GTGGTGTTGC 6217 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCACCATTA GCCTCTGCTG CTCCTATACC ACCACCTGAT CTCAAATCTT GTGGTGTTGC 236 CCATATAGAT GATAAAGGTA CTGAAGTCTC ATACAGTTGT TGCCCTCCTG TACCTGATGA 6157 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATATAGAT GATAAAGGTA CTGAAGTCTC ATACAGTTGT TGCCCTCCTG TACCTGATGA 296 TATCGATAGC GTTCCGTACT ACAAGTTCCC TCCTATGACG AAACTCCGCA TCCGCCCCCC 6097 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATCGATAGC GTTCCGTACT ACAAGTTCCC TCCTATGACG AAACTCCGCA TCCGCCCCCC 356 TGCTCATGCG GCGGA 6082 |||||||||| ||||| TGCTCATGCG GCGGA 371 hqPGS_C08HBa0336I24.1-_SGN-E325498+ (6456 6082) ******************************************************************************** EST sequence 270 +strand 419 n (File: SGN-E335708+) 1 TGCTACTCCT AATACTCTTC CTTTATTATC CACCAACAAA TCCCTCTCTT CTCCCTTCAC 61 CAACAACCAC TCTACTTTCT TATCAAAACC CTCTCAACCT TTCCTCCATG GAAGGCGCTG 121 TCAAAGTTTC AAGGTTTCAT GCAACGTTGG CGAGCATGAC AAAAACCTTG ACGCTGTTGA 181 TAGGAGAAAT GTTCTTTTAG GGTTAGGAGG TTTTTATGGT GCAGCTAATC TTGCACCATT 241 AGCCTCTGCT GCTACTATAC CACCACCTGA TCTCAAATCT TGTGGTGTTG CCCATATAGA 301 TGATAAAGGT ACTGAAGTCT CATACAGATG TTGCCCTCCT GTACCTGATG ATATCGATAG 361 CGTTCCGTAC TACAAGTTCC CTCCTATGAC GAAACTCCGC ATCCGCCCCC CTGCTCATG Predicted gene structure (within gDNA segment 7125 to 5479): Exon 1 6505 6089 ( 417 n); cDNA 3 419 ( 417 n); score: 0.995 MATCH C08HBa0336I24.1- SGN-E335708+ 0.995 417 0.995 C PGS_C08HBa0336I24.1-_SGN-E335708+ (6505 6089) Alignment (genomic DNA sequence = upper lines): CTACTCCTAA TACTCTTCCT TTATTATCCA CCAACAAATC CCTCTCTTCT CCCTTCACCA 6446 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTACTCCTAA TACTCTTCCT TTATTATCCA CCAACAAATC CCTCTCTTCT CCCTTCACCA 62 ACAACCACTC TACTTTCTTA TCAAAACCCT CTCAACCTTT CCTCCATGGA AGGCGCTGTC 6386 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAACCACTC TACTTTCTTA TCAAAACCCT CTCAACCTTT CCTCCATGGA AGGCGCTGTC 122 AAAGTTTCAA GGTTTCATGC AACGTTGGCG AGCATGACAA AAACCTTGAC GCTGTTGATA 6326 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGTTTCAA GGTTTCATGC AACGTTGGCG AGCATGACAA AAACCTTGAC GCTGTTGATA 182 GGAGAAATGT TCTTTTAGGG TTAGGAGGTT TTTATGGTGC AGCTAATCTT GCACCATTAG 6266 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAGAAATGT TCTTTTAGGG TTAGGAGGTT TTTATGGTGC AGCTAATCTT GCACCATTAG 242 CCTCTGCTGC TCCTATACCA CCACCTGATC TCAAATCTTG TGGTGTTGCC CATATAGATG 6206 |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCTGCTGC TACTATACCA CCACCTGATC TCAAATCTTG TGGTGTTGCC CATATAGATG 302 ATAAAGGTAC TGAAGTCTCA TACAGTTGTT GCCCTCCTGT ACCTGATGAT ATCGATAGCG 6146 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ATAAAGGTAC TGAAGTCTCA TACAGATGTT GCCCTCCTGT ACCTGATGAT ATCGATAGCG 362 TTCCGTACTA CAAGTTCCCT CCTATGACGA AACTCCGCAT CCGCCCCCCT GCTCATG 6089 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| TTCCGTACTA CAAGTTCCCT CCTATGACGA AACTCCGCAT CCGCCCCCCT GCTCATG 419 hqPGS_C08HBa0336I24.1-_SGN-E335708+ (6505 6089) ******************************************************************************** EST sequence 346 +strand 408 n (File: SGN-E331180+) 1 ATACTCTTCC TTTATTATCC ACCAACAAAT CCCTCTCTTC TCCCTTCACC AACAACCACT 61 CTACTTTCTT ATCAAAACCC TCTCAACCTT TCCTCCATGG AAGGCGCTGT CAAAGTTTCA 121 AGGTTTCATG CAACGTTGGC GAGCATGACA AAAACCTTGA CGCTGTTGAT AGGAGAAATG 181 TTCTTTTAGG GTTAGGAGGT TTTTATGGTG CAGCTAATCT TGCACCATTA GCCTCTGCTG 241 CTCCTATACC ACCACCTGAT CTCAAATCTT GTGGTGTTGC CCATATAGAT GATAAAGGTA 301 CTGAAGTCTC ATACAGTTGT TGCCCTCCTG TACCTGATGA TATCGATAGC GTTCCGTACT 361 ACAAGTTCCC TCCTATGACG AAACTCCGCA TCCGCCCCCC TGCTCATG Predicted gene structure (within gDNA segment 7096 to 5479): Exon 1 6496 6089 ( 408 n); cDNA 1 408 ( 408 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E331180+ 1.000 408 1.000 C PGS_C08HBa0336I24.1-_SGN-E331180+ (6496 6089) Alignment (genomic DNA sequence = upper lines): ATACTCTTCC TTTATTATCC ACCAACAAAT CCCTCTCTTC TCCCTTCACC AACAACCACT 6437 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATACTCTTCC TTTATTATCC ACCAACAAAT CCCTCTCTTC TCCCTTCACC AACAACCACT 60 CTACTTTCTT ATCAAAACCC TCTCAACCTT TCCTCCATGG AAGGCGCTGT CAAAGTTTCA 6377 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTACTTTCTT ATCAAAACCC TCTCAACCTT TCCTCCATGG AAGGCGCTGT CAAAGTTTCA 120 AGGTTTCATG CAACGTTGGC GAGCATGACA AAAACCTTGA CGCTGTTGAT AGGAGAAATG 6317 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGTTTCATG CAACGTTGGC GAGCATGACA AAAACCTTGA CGCTGTTGAT AGGAGAAATG 180 TTCTTTTAGG GTTAGGAGGT TTTTATGGTG CAGCTAATCT TGCACCATTA GCCTCTGCTG 6257 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTTTAGG GTTAGGAGGT TTTTATGGTG CAGCTAATCT TGCACCATTA GCCTCTGCTG 240 CTCCTATACC ACCACCTGAT CTCAAATCTT GTGGTGTTGC CCATATAGAT GATAAAGGTA 6197 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCCTATACC ACCACCTGAT CTCAAATCTT GTGGTGTTGC CCATATAGAT GATAAAGGTA 300 CTGAAGTCTC ATACAGTTGT TGCCCTCCTG TACCTGATGA TATCGATAGC GTTCCGTACT 6137 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGAAGTCTC ATACAGTTGT TGCCCTCCTG TACCTGATGA TATCGATAGC GTTCCGTACT 360 ACAAGTTCCC TCCTATGACG AAACTCCGCA TCCGCCCCCC TGCTCATG 6089 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| ACAAGTTCCC TCCTATGACG AAACTCCGCA TCCGCCCCCC TGCTCATG 408 hqPGS_C08HBa0336I24.1-_SGN-E331180+ (6496 6089) ******************************************************************************** EST sequence 260 +strand 410 n (File: SGN-E337083+) 1 CTAATACTCT TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTCCCTTC ACCAACAACC 61 ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC TGTCAAAGTT 121 TCAAGGTTTC ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT GATAGGAGAA 181 ATGTTCTTTT AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA TTAGCCTCTG 241 CTGCTCCTAT ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA GATGATAAAG 301 GTACTGAAGT CTCATACAGT TGTTGCCCTC CTGTACCTGA TGATATCGAT AGCGTTCCGT 361 ACTACAAGTT CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT Predicted gene structure (within gDNA segment 7099 to 5480): Exon 1 6499 6090 ( 410 n); cDNA 1 410 ( 410 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E337083+ 1.000 410 1.000 C PGS_C08HBa0336I24.1-_SGN-E337083+ (6499 6090) Alignment (genomic DNA sequence = upper lines): CTAATACTCT TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTCCCTTC ACCAACAACC 6440 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAATACTCT TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTCCCTTC ACCAACAACC 60 ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC TGTCAAAGTT 6380 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC TGTCAAAGTT 120 TCAAGGTTTC ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT GATAGGAGAA 6320 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAGGTTTC ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT GATAGGAGAA 180 ATGTTCTTTT AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA TTAGCCTCTG 6260 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGTTCTTTT AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA TTAGCCTCTG 240 CTGCTCCTAT ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA GATGATAAAG 6200 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGCTCCTAT ACCACCACCT GATCTCAAAT CTTGTGGTGT TGCCCATATA GATGATAAAG 300 GTACTGAAGT CTCATACAGT TGTTGCCCTC CTGTACCTGA TGATATCGAT AGCGTTCCGT 6140 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTACTGAAGT CTCATACAGT TGTTGCCCTC CTGTACCTGA TGATATCGAT AGCGTTCCGT 360 ACTACAAGTT CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT 6090 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTACAAGTT CCCTCCTATG ACGAAACTCC GCATCCGCCC CCCTGCTCAT 410 hqPGS_C08HBa0336I24.1-_SGN-E337083+ (6499 6090) ******************************************************************************** EST sequence 325 +strand 423 n (File: SGN-E320713+) 1 ACAATGTCTT CTTCTTCTTC TATTACTACT ACTCTTCCTT TATGCACCAA CAAATCCCTC 61 TCTTCTTCCT TCACCACCAC CAACTCATCC TTGTTATCAA AACCCTCTCA ACTTTTCCTC 121 CACGGAAGGC GTAATCAAAG TTTCAAGGTT TCATGCAACG CAAACAACGT TGACAAAAAC 181 CCTGACGCTG TTGATAGACG AAACGTTCTT TTAGGGTTAG GGAGTCTTTA TGGTGCAGCT 241 AATCTTGCAC CATTAGCGAC TGCTGCACCT ATACCACCTC CTGATCTCAA GTCTTGTGGT 301 ACTGCCCATG TANAAGAAGG TGTTGATGTA ATATACAGTT GTTGCCCTCC TGTACCCGAT 361 GATATCGATA GTGTTCCGTA CTACAAGTTC CCTTCTATGA CTAAACTCCG CATCCGCCCC 421 CCT Predicted gene structure (within gDNA segment 8957 to 5486): Exon 1 6518 6096 ( 423 n); cDNA 1 423 ( 423 n); score: 0.845 MATCH C08HBa0336I24.1- SGN-E320713+ 0.845 423 1.000 C PGS_C08HBa0336I24.1-_SGN-E320713+ (6518 6096) Alignment (genomic DNA sequence = upper lines): ACAATGTCTT CTTCTACTCC TAATACT-CT TC-CTT-TAT TATCCACCAA CAAATCCCTC 6462 |||||||||| ||||| || | || |||| || | ||| | ||| |||||| |||||||||| ACAATGTCTT CTTCTTCTTC TATTACTACT ACTCTTCCTT TATGCACCAA CAAATCCCTC 60 TCTTCTCCCT TCACCAACAA CCACTCTACT TTCTTATCAA AACCCTCTCA ACCTTTCCTC 6402 |||||| ||| |||||| || | |||| | || ||||||| |||||||||| || ||||||| TCTTCTTCCT TCACCACCAC CAACTCATCC TTGTTATCAA AACCCTCTCA ACTTTTCCTC 120 CATGGAAGGC GCTGTCAAAG TTTCAAGGTT TCATGCAACG TTGGCGAGCA TGACAAAAAC 6342 || ||||||| | |||||| |||||||||| |||||||||| | | |||||||||| CACGGAAGGC GTAATCAAAG TTTCAAGGTT TCATGCAACG CAAACAACGT TGACAAAAAC 180 CTTGACGCTG TTGATAGGAG AAATGTTCTT TTAGGGTTAG GAGGTTTTTA TGGTGCAGCT 6282 | |||||||| ||||||| | ||| |||||| |||||||||| | || |||| |||||||||| CCTGACGCTG TTGATAGACG AAACGTTCTT TTAGGGTTAG GGAGTCTTTA TGGTGCAGCT 240 AATCTTGCAC CATTAGCCTC TGCTGCTCCT ATACCACCAC CTGATCTCAA ATCTTGTGGT 6222 |||||||||| ||||||| | |||||| ||| |||||||| | |||||||||| ||||||||| AATCTTGCAC CATTAGCGAC TGCTGCACCT ATACCACCTC CTGATCTCAA GTCTTGTGGT 300 GTTGCCCATA TAGATGATAA AGGTACTGAA GTCTCATACA GTTGTTGCCC TCCTGTACCT 6162 ||||||| || | | | |||| ||| || ||||| |||||||||| ||||||||| ACTGCCCATG TANA--A-GA AGGTGTTGAT GTAATATACA GTTGTTGCCC TCCTGTACCC 357 GATGATATCG ATAGCGTTCC GTACTACAAG TTCCCTCCTA TGACGAAACT CCGCATCCGC 6102 |||||||||| |||| ||||| |||||||||| |||||| ||| |||| ||||| |||||||||| GATGATATCG ATAGTGTTCC GTACTACAAG TTCCCTTCTA TGACTAAACT CCGCATCCGC 417 CCCCCT 6096 |||||| CCCCCT 423 hqPGS_C08HBa0336I24.1-_SGN-E320713+ (6518 6096) ******************************************************************************** EST sequence 289 +strand 358 n (File: SGN-E317525+) 1 ACCAACAAAT CCATCTCTTC TCCCTTCACC AACAACCACT CTACTTTCTT ATCAAAACCC 61 TCTCAACCTT TCCTCCATGG AAGGCGCTGT CAAAGTTTCA AGGTTTCATG CAACGTTGGC 121 GAGCATGACA AAAACCTTGA CGCTGTTGAT AGGAGAAATG TTCTTTTACG GTTAGGAGGT 181 TTCTATGGTG CAGCTAATCT TGCACCATTA GCCTCTGCTG GTCCTATACC ACCACCTGAT 241 CTCAAATCTT GAGGTGCTGC CCATATAGAT GATAAAGGTA CTGAAGTCTC ATACAGTTGT 301 TGCCCTCCTG TACCCGATGA TATCGATAGC GCTCCGTACT ACAAGTTCCC TCCTATGA Predicted gene structure (within gDNA segment 7193 to 5509): Exon 1 6476 6119 ( 358 n); cDNA 1 358 ( 358 n); score: 0.978 MATCH C08HBa0336I24.1- SGN-E317525+ 0.978 358 1.000 C PGS_C08HBa0336I24.1-_SGN-E317525+ (6476 6119) Alignment (genomic DNA sequence = upper lines): ACCAACAAAT CCCTCTCTTC TCCCTTCACC AACAACCACT CTACTTTCTT ATCAAAACCC 6417 |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAACAAAT CCATCTCTTC TCCCTTCACC AACAACCACT CTACTTTCTT ATCAAAACCC 60 TCTCAACCTT TCCTCCATGG AAGGCGCTGT CAAAGTTTCA AGGTTTCATG CAACGTTGGC 6357 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTCAACCTT TCCTCCATGG AAGGCGCTGT CAAAGTTTCA AGGTTTCATG CAACGTTGGC 120 GAGCATGACA AAAACCTTGA CGCTGTTGAT AGGAGAAATG TTCTTTTAGG GTTAGGAGGT 6297 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| GAGCATGACA AAAACCTTGA CGCTGTTGAT AGGAGAAATG TTCTTTTACG GTTAGGAGGT 180 TTTTATGGTG CAGCTAATCT TGCACCATTA GCCTCTGCTG CTCCTATACC ACCACCTGAT 6237 || ||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| TTCTATGGTG CAGCTAATCT TGCACCATTA GCCTCTGCTG GTCCTATACC ACCACCTGAT 240 CTCAAATCTT GTGGTGTTGC CCATATAGAT GATAAAGGTA CTGAAGTCTC ATACAGTTGT 6177 |||||||||| | |||| ||| |||||||||| |||||||||| |||||||||| |||||||||| CTCAAATCTT GAGGTGCTGC CCATATAGAT GATAAAGGTA CTGAAGTCTC ATACAGTTGT 300 TGCCCTCCTG TACCTGATGA TATCGATAGC GTTCCGTACT ACAAGTTCCC TCCTATGA 6119 |||||||||| |||| ||||| |||||||||| | |||||||| |||||||||| |||||||| TGCCCTCCTG TACCCGATGA TATCGATAGC GCTCCGTACT ACAAGTTCCC TCCTATGA 358 hqPGS_C08HBa0336I24.1-_SGN-E317525+ (6476 6119) ******************************************************************************** EST sequence 98 +strand 375 n (File: SGN-E325560+) 1 AATGTCTTCT TCTACTCCTA ATACTCTTCC TTTATTATCC ACCAACAAAT CCCTCTCTTC 61 TCCCTTCACC AACAACCACT CTACTTTCTT ATCAAAACCC TCTCAACCTT TCCTCCATGG 121 AAGGCGCTGT CAAAGTTTCA AGGTTTCATG CAACGTTGGC GAGCATGACA AAAACCTTGA 181 CGCTGTTGAT AGGAGAAATG TTCTTTTAGG GTTAGGAGGT TTTTATGGTG CAGCTAATCT 241 TGCACCATTA GCCTCTGCTG CTCCTATACC ACCACCTGAT CTCAAATCTT GTGGCGCTGC 301 CCATATAGAT GATAAAGGTA CTGAAGTCTC ATACAGTTGT TGGCCTCCTG TACCTGATGA 361 TATCGATAGC GTTCC Predicted gene structure (within gDNA segment 7116 to 5532): Exon 1 6516 6142 ( 375 n); cDNA 1 375 ( 375 n); score: 0.992 MATCH C08HBa0336I24.1- SGN-E325560+ 0.992 375 1.000 C PGS_C08HBa0336I24.1-_SGN-E325560+ (6516 6142) Alignment (genomic DNA sequence = upper lines): AATGTCTTCT TCTACTCCTA ATACTCTTCC TTTATTATCC ACCAACAAAT CCCTCTCTTC 6457 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGTCTTCT TCTACTCCTA ATACTCTTCC TTTATTATCC ACCAACAAAT CCCTCTCTTC 60 TCCCTTCACC AACAACCACT CTACTTTCTT ATCAAAACCC TCTCAACCTT TCCTCCATGG 6397 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCCTTCACC AACAACCACT CTACTTTCTT ATCAAAACCC TCTCAACCTT TCCTCCATGG 120 AAGGCGCTGT CAAAGTTTCA AGGTTTCATG CAACGTTGGC GAGCATGACA AAAACCTTGA 6337 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGCGCTGT CAAAGTTTCA AGGTTTCATG CAACGTTGGC GAGCATGACA AAAACCTTGA 180 CGCTGTTGAT AGGAGAAATG TTCTTTTAGG GTTAGGAGGT TTTTATGGTG CAGCTAATCT 6277 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTGTTGAT AGGAGAAATG TTCTTTTAGG GTTAGGAGGT TTTTATGGTG CAGCTAATCT 240 TGCACCATTA GCCTCTGCTG CTCCTATACC ACCACCTGAT CTCAAATCTT GTGGTGTTGC 6217 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| | ||| TGCACCATTA GCCTCTGCTG CTCCTATACC ACCACCTGAT CTCAAATCTT GTGGCGCTGC 300 CCATATAGAT GATAAAGGTA CTGAAGTCTC ATACAGTTGT TGCCCTCCTG TACCTGATGA 6157 |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| CCATATAGAT GATAAAGGTA CTGAAGTCTC ATACAGTTGT TGGCCTCCTG TACCTGATGA 360 TATCGATAGC GTTCC 6142 |||||||||| ||||| TATCGATAGC GTTCC 375 hqPGS_C08HBa0336I24.1-_SGN-E325560+ (6516 6142) ******************************************************************************** EST sequence 160 +strand 311 n (File: SGN-E281487+) 1 GCACGAGTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC TTCACCAACA ACCACTCTAC 61 TTTCTTATCA AAACCACGTC AACCTTTCCT CCATGGAAGG CGCTGTCAAA GTTTCAAGGT 121 TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT GTTGATAGGA GAAATGTTCT 181 TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA CCATTAGCCT CTGCTGCTCC 241 TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT ATAGATGATA AAGGTACTGA 301 AGTCTCATAC A Predicted gene structure (within gDNA segment 7155 to 5572): Exon 1 6485 6182 ( 304 n); cDNA 8 311 ( 304 n); score: 0.990 MATCH C08HBa0336I24.1- SGN-E281487+ 0.990 304 0.977 C PGS_C08HBa0336I24.1-_SGN-E281487+ (6485 6182) Alignment (genomic DNA sequence = upper lines): TTATTATCCA CCAACAAATC CCTCTCTTCT CCCTTCACCA ACAACCACTC TACTTTCTTA 6426 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTATTATCCA CCAACAAATC CCTCTCTTCT CCCTTCACCA ACAACCACTC TACTTTCTTA 67 TCAAAACCCT CTCAACCTTT CCTCCATGGA AGGCGCTGTC AAAGTTTCAA GGTTTCATGC 6366 |||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAAACCAC GTCAACCTTT CCTCCATGGA AGGCGCTGTC AAAGTTTCAA GGTTTCATGC 127 AACGTTGGCG AGCATGACAA AAACCTTGAC GCTGTTGATA GGAGAAATGT TCTTTTAGGG 6306 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACGTTGGCG AGCATGACAA AAACCTTGAC GCTGTTGATA GGAGAAATGT TCTTTTAGGG 187 TTAGGAGGTT TTTATGGTGC AGCTAATCTT GCACCATTAG CCTCTGCTGC TCCTATACCA 6246 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAGGAGGTT TTTATGGTGC AGCTAATCTT GCACCATTAG CCTCTGCTGC TCCTATACCA 247 CCACCTGATC TCAAATCTTG TGGTGTTGCC CATATAGATG ATAAAGGTAC TGAAGTCTCA 6186 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCACCTGATC TCAAATCTTG TGGTGTTGCC CATATAGATG ATAAAGGTAC TGAAGTCTCA 307 TACA 6182 |||| TACA 311 hqPGS_C08HBa0336I24.1-_SGN-E281487+ (6485 6182) ******************************************************************************** EST sequence 363 +strand 281 n (File: SGN-E312021+) 1 TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC TACACCAACA ACCACTCTAC 61 TTTCTTATCA AAACCCTCTC AACCTTTCCT TCATGGAAGG CGCTGTCAAA GTTTCAAGGT 121 TTCATGCAAC GTCGGCGAGC ATGACAAAAA CCTTGACGCT GTTGATAGGA GAAATGACCT 181 CTTAGGGTTA GGAGGTTTTT ATGGAGCAGC TAATCTTGCA CCATTAGCCT CTGCTGCTCC 241 TATACCACCA CCAGATCTCA AATCTTGTGG TGTTGCCCAT A Predicted gene structure (within gDNA segment 7092 to 5602): Exon 1 6492 6212 ( 281 n); cDNA 1 281 ( 281 n); score: 0.972 MATCH C08HBa0336I24.1- SGN-E312021+ 0.972 281 1.000 C PGS_C08HBa0336I24.1-_SGN-E312021+ (6492 6212) Alignment (genomic DNA sequence = upper lines): TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC TTCACCAACA ACCACTCTAC 6433 |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| TCTTCCTTTA TTATCCACCA ACAAATCCCT CTCTTCTCCC TACACCAACA ACCACTCTAC 60 TTTCTTATCA AAACCCTCTC AACCTTTCCT CCATGGAAGG CGCTGTCAAA GTTTCAAGGT 6373 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| TTTCTTATCA AAACCCTCTC AACCTTTCCT TCATGGAAGG CGCTGTCAAA GTTTCAAGGT 120 TTCATGCAAC GTTGGCGAGC ATGACAAAAA CCTTGACGCT GTTGATAGGA GAAATGTTCT 6313 |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| |||||| || TTCATGCAAC GTCGGCGAGC ATGACAAAAA CCTTGACGCT GTTGATAGGA GAAATGACCT 180 TTTAGGGTTA GGAGGTTTTT ATGGTGCAGC TAATCTTGCA CCATTAGCCT CTGCTGCTCC 6253 ||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| CTTAGGGTTA GGAGGTTTTT ATGGAGCAGC TAATCTTGCA CCATTAGCCT CTGCTGCTCC 240 TATACCACCA CCTGATCTCA AATCTTGTGG TGTTGCCCAT A 6212 |||||||||| || ||||||| |||||||||| |||||||||| | TATACCACCA CCAGATCTCA AATCTTGTGG TGTTGCCCAT A 281 hqPGS_C08HBa0336I24.1-_SGN-E312021+ (6492 6212) ******************************************************************************** EST sequence 222 +strand 281 n (File: SGN-E314863+) 1 TCTTCTACTC CTAATACTCT TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTCCCTTC 61 ACCAACAACC ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC 121 TGTCAAAGTT TCAAGGATTC ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACACTGTT 181 GATAGGAGAA ATGTTCTTTT AGGGTTAGGA TGGTTTTATG GTGCAGCTAA TCTTGCACCA 241 TTAGCCTCTG CTGCTCCTAT ACCACCACCT GATCTCAAAT C Predicted gene structure (within gDNA segment 7109 to 5619): Exon 1 6509 6229 ( 281 n); cDNA 1 281 ( 281 n); score: 0.986 MATCH C08HBa0336I24.1- SGN-E314863+ 0.986 281 1.000 C PGS_C08HBa0336I24.1-_SGN-E314863+ (6509 6229) Alignment (genomic DNA sequence = upper lines): TCTTCTACTC CTAATACTCT TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTCCCTTC 6450 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTCTACTC CTAATACTCT TCCTTTATTA TCCACCAACA AATCCCTCTC TTCTCCCTTC 60 ACCAACAACC ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC 6390 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAACAACC ACTCTACTTT CTTATCAAAA CCCTCTCAAC CTTTCCTCCA TGGAAGGCGC 120 TGTCAAAGTT TCAAGGTTTC ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACGCTGTT 6330 |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| |||| ||||| TGTCAAAGTT TCAAGGATTC ATGCAACGTT GGCGAGCATG ACAAAAACCT TGACACTGTT 180 GATAGGAGAA ATGTTCTTTT AGGGTTAGGA GGTTTTTATG GTGCAGCTAA TCTTGCACCA 6270 |||||||||| |||||||||| |||||||||| | ||||||| |||||||||| |||||||||| GATAGGAGAA ATGTTCTTTT AGGGTTAGGA TGGTTTTATG GTGCAGCTAA TCTTGCACCA 240 TTAGCCTCTG CTGCTCCTAT ACCACCACCT GATCTCAAAT C 6229 |||||||||| |||||||||| |||||||||| |||||||||| | TTAGCCTCTG CTGCTCCTAT ACCACCACCT GATCTCAAAT C 281 hqPGS_C08HBa0336I24.1-_SGN-E314863+ (6509 6229) ******************************************************************************** EST sequence 304 +strand 186 n (File: SGN-E289925+) 1 AAAACCCTCT CAACCTTTCC TCCATGGAAG GCGCTGTCAA AGTTTCAAGG TTTCATGCAA 61 CGTTTGCGAG CATGACAAAA ACCTTGACGC TGTTGATAGG AGAAATGTTC TTTTAGGGTT 121 AGGAGGTTTT TATGGTGCAG CTAATCTTGC ACCATTAGCC TCTGCTGCTC CTATACCACC 181 ACCTGA Predicted gene structure (within gDNA segment 7023 to 5628): Exon 1 6423 6238 ( 186 n); cDNA 1 186 ( 186 n); score: 0.995 MATCH C08HBa0336I24.1- SGN-E289925+ 0.995 186 1.000 C PGS_C08HBa0336I24.1-_SGN-E289925+ (6423 6238) Alignment (genomic DNA sequence = upper lines): AAAACCCTCT CAACCTTTCC TCCATGGAAG GCGCTGTCAA AGTTTCAAGG TTTCATGCAA 6364 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAACCCTCT CAACCTTTCC TCCATGGAAG GCGCTGTCAA AGTTTCAAGG TTTCATGCAA 60 CGTTGGCGAG CATGACAAAA ACCTTGACGC TGTTGATAGG AGAAATGTTC TTTTAGGGTT 6304 |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTTGCGAG CATGACAAAA ACCTTGACGC TGTTGATAGG AGAAATGTTC TTTTAGGGTT 120 AGGAGGTTTT TATGGTGCAG CTAATCTTGC ACCATTAGCC TCTGCTGCTC CTATACCACC 6244 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGAGGTTTT TATGGTGCAG CTAATCTTGC ACCATTAGCC TCTGCTGCTC CTATACCACC 180 ACCTGA 6238 |||||| ACCTGA 186 hqPGS_C08HBa0336I24.1-_SGN-E289925+ (6423 6238) ******************************************************************************** EST sequence 170 +strand 259 n (File: SGN-E281327+) 1 GCACGAGGTC TTCTTCTACT CCTAATACTC TTCCTTTATT ATCCACCAAC AAATCCCTCT 61 CTTCTCCCTT CACCAACAAC CACTCTACTT TCTTATCAAA ACCCTCTCAA CCTTTCCTCC 121 ATGGAAGGCG CTGTCAAAGT TTCAAGGTTT CATGCAACGT TGGCGAGCAT GACAAAAACC 181 TTGACGCTGT TGATAGGAGA AATGTTCTTT TAGGGTTAGG AGGTTTTTAT GGTGCAGCTA 241 ATCTTGCACC ATTAGCCTC Predicted gene structure (within gDNA segment 7183 to 5652): Exon 1 6518 6262 ( 257 n); cDNA 3 259 ( 257 n); score: 0.992 MATCH C08HBa0336I24.1- SGN-E281327+ 0.992 257 0.992 C PGS_C08HBa0336I24.1-_SGN-E281327+ (6518 6262) Alignment (genomic DNA sequence = upper lines): ACAATGTCTT CTTCTACTCC TAATACTCTT CCTTTATTAT CCACCAACAA ATCCCTCTCT 6459 || | ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACGAGGTCTT CTTCTACTCC TAATACTCTT CCTTTATTAT CCACCAACAA ATCCCTCTCT 62 TCTCCCTTCA CCAACAACCA CTCTACTTTC TTATCAAAAC CCTCTCAACC TTTCCTCCAT 6399 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTCCCTTCA CCAACAACCA CTCTACTTTC TTATCAAAAC CCTCTCAACC TTTCCTCCAT 122 GGAAGGCGCT GTCAAAGTTT CAAGGTTTCA TGCAACGTTG GCGAGCATGA CAAAAACCTT 6339 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAAGGCGCT GTCAAAGTTT CAAGGTTTCA TGCAACGTTG GCGAGCATGA CAAAAACCTT 182 GACGCTGTTG ATAGGAGAAA TGTTCTTTTA GGGTTAGGAG GTTTTTATGG TGCAGCTAAT 6279 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACGCTGTTG ATAGGAGAAA TGTTCTTTTA GGGTTAGGAG GTTTTTATGG TGCAGCTAAT 242 CTTGCACCAT TAGCCTC 6262 |||||||||| ||||||| CTTGCACCAT TAGCCTC 259 hqPGS_C08HBa0336I24.1-_SGN-E281327+ (6518 6262) ******************************************************************************** EST sequence 28 +strand 858 n (File: SGN-E540411+) 1 TTTTTTTTTT CTCATAAACA TAAAGTACAC TAATATTATT ATTATAAAAT TCTCCAGTCT 61 TATACAAAAC AACATATGAC TTCACTTGAA CTATAATTAA AGAACAATAA AGGGATAATG 121 CACAAGTACC CCCTCAACCT ATGCCCGAAA TTCCAGAGAC ACACTTATAC TATACTAAGG 181 TCCTATTACC CCCCTGAACT TATTTTATAA GTAATTTTCT ACCCCTTTTT AGCCTACGTG 241 GCACTAGTTT AAAAAAAAAG TCAACAACCA TTGGGCCCAC AAGATAGTGC CACGTAGGTC 301 TAAAAGGGGT AAAAAATTAT TAATAAATAA GTTCAGGGGG TAATAAGATC TTAGTATGGT 361 ATAAGTGTAT CTCTGAGATT TTGGACATAG GCTAAGGGGG TACTTGGACA TTATCCCAAC 421 AATAAATAAA GGATATAACA TGATTCAAAA GACAACACGT GATAACCACT TCTACAACTT 481 GTGCATGATC AATTGAGCAC CATATTGAGG TTGAAGCAAC AATGGGTGAG GAGCATGAGC 541 ATAAGATGGA GAGAGTTCAA ATGCATAATG TTTTAGAATC ATGACCATTG CCATTTTTGC 601 CTCTAACATA GCAAAATTTT GCCCAATACA TATTCTTGGA CCCCAACTAA ATGGAAAAAA 661 TACAACTTGT CCTTTTGTTG CTTTTGATAT TCCTTCACTA AATCTCTCTG GCATAAACTC 721 CATTGCATCA TCTCCCCATA TTTCAGTATC ATGATGCACT AACATTGTTG CCAATATGAG 781 TTGGACCCCA GAGGGTAACA CAAATCCCCT AACTTTGTTT CTGTATTCAC CATGCGATTA 841 ATCGCGTATA CTGATGTA Predicted gene structure (within gDNA segment 8924 to 18674): Exon 1 10051 10068 ( 18 n); cDNA 95 112 ( 18 n); score: 0.833 Intron 1 10069 11333 (1265 n); Pd: 0.000 (s: 0), Pa: 0.949 (s: 0.92) Exon 2 11334 11654 ( 321 n); cDNA 113 429 ( 317 n); score: 0.777 Intron 2 11655 17724 (6070 n); Pd: 0.000 (s: 0.68), Pa: 0.342 (s: 0) Exon 3 17725 17749 ( 25 n); cDNA 430 455 ( 26 n); score: 0.620 PPA cDNA 12 1 MATCH C08HBa0336I24.1+ SGN-E540411+ 0.777 364 0.424 C PGS_C08HBa0336I24.1+_SGN-E540411+ (10051 10068,11334 11654,17725 17749) Alignment (genomic DNA sequence = upper lines): AAATAAAGAA CAATCCAGGT GTTTTCTTGA TAGTTTGTCA TGACCCAAAA ATGGGTGTGA 10110 || ||||||| |||| || AATTAAAGAA CAATAAAG.. .......... .......... .......... .......... 112 TGGCACTCGT CTAATCCTAC CAAGACAAGT CAGCCTAAAA CTCAACATCT AACAAAGTGC 10170 .......... .......... .......... .......... .......... .......... 112 AAAAATAAAC AAAAATTCAG CAACAGTTTC AATTAAGAAA ACAAGTCAAC TTAATTCAAT 10230 .......... .......... .......... .......... .......... .......... 112 CCTCAAAATC AGGTTGTCAC GTGGACAAGT CTCTAATGAA AATATTACAA TTGAATAAAG 10290 .......... .......... .......... .......... .......... .......... 112 CACGCGACTC TAAAATGAAG TTGTCTTTCA AATAAAAACA AAGTCATAAA ACTGGAGTAG 10350 .......... .......... .......... .......... .......... .......... 112 GAAGGTTCGT TGAGGTGACA AACAACTACC TCAAAATTCT CCACAAGATG CCTCGAAAAC 10410 .......... .......... .......... .......... .......... .......... 112 AAAGAGAATG GAAGGTATCA CAAAGATCCG GGCTCGTAAC CTATAAAAAA TTGTAGAAGC 10470 .......... .......... .......... .......... .......... .......... 112 AATAGGTGAG TATCAAACCA CTCGATACCC AACAAGCAAA CTTCTAAACA CAAGATAAGA 10530 .......... .......... .......... .......... .......... .......... 112 GAACAAAATA CGGGTACTCC TTAAACCATA TCTGAATTTC CACACTACCA CCTAACAGTT 10590 .......... .......... .......... .......... .......... .......... 112 CACAGTTTAC AAAGCACACA GCTCAACAAC AACACTTTAT CAGATTACAT ATTCACTATA 10650 .......... .......... .......... .......... .......... .......... 112 ACAACTCAAT ATTCACAGTC ACAAGTTCCA CAGAAAAACA CTGCAAGATC AGCAAAACAC 10710 .......... .......... .......... .......... .......... .......... 112 AAGTTCAAGA TCATCAATAA TAAAAATGTG TAATGCCATG AGATGCAATG CCAAGTATAG 10770 .......... .......... .......... .......... .......... .......... 112 TGATGCATGT CTGCCCTAAT GATACACACT CGTCTCTCAG TCTGGGACCC ATGAAGACAT 10830 .......... .......... .......... .......... .......... .......... 112 ATATGTCCAT ACATCTACCT TGGCGCACGA CACGACCCTC GATAATAGTA AGCGTCGTGA 10890 .......... .......... .......... .......... .......... .......... 112 CACGCGATAC GTTTCTCGAA ATATAATATC TATCGCGGCA CGCGATACGA CCCTCGAAAT 10950 .......... .......... .......... .......... .......... .......... 112 GGTATATCTT ATAACATAAC TCTTATCACA ACCATGTTTC AAATGCAATG CAAATGACAT 11010 .......... .......... .......... .......... .......... .......... 112 GTTTAAACAA ATAATGAGGA AATAATCATT TTGATAACAA GACACAATTC ACAACAATGC 11070 .......... .......... .......... .......... .......... .......... 112 AACCGTAATA CAACATCAAG AAATAAGCAA CAAGCCTCCA AATCATTCTC AAACATCACA 11130 .......... .......... .......... .......... .......... .......... 112 CAAGAAACTA CACGAATTTC ATACGCTTAA CAAGGATTTA GAAATGCACT TACCTTTGCC 11190 .......... .......... .......... .......... .......... .......... 112 AATCGAATAA TCACTCTTGG GCCTTCCTTT TCCGTTGAGC TTCCGAATCG ATGGAATCTA 11250 .......... .......... .......... .......... .......... .......... 112 TTCAAGTATA TATATTCACA ATAAGGTTTC GGAACTAACA ATACCCACAT TATCATGTGT 11310 .......... .......... .......... .......... .......... .......... 112 TTAACCTTTA CCTAAAAATT TAGGGATAAT TCCCAAGTAC CCCCTCAACC TATGCCCGAA 11370 ||||||| | ||||||| |||||||||| |||||||||| .......... .......... ...GGATAAT GCACAAGTAC CCCCTCAACC TATGCCCGAA 149 ATCTCAGAGA CACACTTATA CTATACTAAG GTCCTATTAC CCCCATGAAC TTATATTATT 11430 || |||||| |||||||||| |||||||||| |||||||||| |||| ||||| |||| |||| ATTCCAGAGA CACACTTATA CTATACTAAG GTCCTATTAC CCCCCTGAAC TTATTTTATA 209 AATAATTTTT TACCCCTTTT TAGCCCACGT GGCACTATCT TGTGGGCCCA ACGATGGTTG 11490 | ||||||| |||||||||| ||||| |||| ||||||| | | | | | | | AGTAATTTTC TACCCCTTTT TAGCCTACGT GGCACTA-GT T-TAAAAAAA AAG-TCAACA 266 ATTTTTTTG- TTTCAAACTA GTGTCGCGTA AGCTAAAAAG GGGTAGAGAA TTACTTATAA 11549 | || | ||| || ||| | |||| | ||||| ||||| | || ||| ||| | ACCATTGGGC CCACAAGATA GTGCCACGTA GGTCTAAAAG GGGTAAAAAA TTA-TTAATA 325 AATAAGTTCA GGGGGTAATA GGACCTTAGT ATAGTATAAG TGCGTCTCTG GGATTTCGGG 11609 |||||||||| |||||||||| || |||||| || ||||||| || |||||| ||||| || AATAAGTTCA GGGGGTAATA AGATCTTAGT ATGGTATAAG TGTATCTCTG AGATTTTGGA 385 CATAGGTTGA GGGGATACTT ATGCATTACC CAAATTTATG ATCAAGTTCT TAATTTGTGA 11669 |||||| | | |||| ||||| ||||| | | || || | || CATAGGCTAA GGGGGTACTT GGACATTATC CCAA-CAATA AATAA..... .......... 429 TGCCAACTAA CATTTCAACT ATCATATTAT CCAAGTTTCA AGTCTAAGAT TGCATCCCAA 11729 .......... .......... .......... .......... .......... .......... 429 ATTTTTCCAA CATCATTATT TAAATGGTAC TCACAAAATA CCATTCATTC AATATTTAAA 11789 .......... .......... .......... .......... .......... .......... 429 TATACATACC AATATATCAA AATTTAAACT ATAATCTAAT AACTAAGACT ATGAAAATTA 11849 .......... .......... .......... .......... .......... .......... 429 TACCGAAATG AATACACATT AACTCTGTGT TATGTTTTCT TCTTTCCTCC CCACCAATGA 11909 .......... .......... .......... .......... .......... .......... 429 TTGGCTCATG AGGGCCAAAC ATTGGCCATC ATTACCTATC CAATTTTATT TTCAATACTT 11969 .......... .......... .......... .......... .......... .......... 429 GCCTTAATTT CCAGAATAGT CATATGTAAC AAACATATAG CAATCTAACC TAATTTCCAT 12029 .......... .......... .......... .......... .......... .......... 429 TCCAATAGCA CCTAATTAAT TTTATTATTT TGTATTTAAC ATTACCTCCA ATGAAAACTA 12089 .......... .......... .......... .......... .......... .......... 429 ACCATTTTTT TTCGATTTAC CCCAACTATA CTTAACCATA CTGCAACAGA TGGAATATTA 12149 .......... .......... .......... .......... .......... .......... 429 ATTGCACTTT CAAATTCATT TCTTAAATTC ATAAAATATT GCATTTACCC ATAATCAATT 12209 .......... .......... .......... .......... .......... .......... 429 AACCAAAAAT CAATTACGAC AAAGTACTAG TGATTGTTAC CTGCAGATCG ATAGCTCTTT 12269 .......... .......... .......... .......... .......... .......... 429 TCCTTTCATG TGCGTCGGCT TAAGTAAGGT TTCTGCCTCT CTTTCTTTTT TAAATTAATT 12329 .......... .......... .......... .......... .......... .......... 429 ATTTATTAAT CTGATCAAAA TTATTAACTT ATTTTTTTTA TATATATGAC CATAATTGTA 12389 .......... .......... .......... .......... .......... .......... 429 TAGGATATTA AATAAATGAT CATTTTAGTC CACTAACTAT CTGTTAGTTT CATTATTTAT 12449 .......... .......... .......... .......... .......... .......... 429 AATTAACCAT AAATAAATTA ATATAACCTT GGGGGTCATT ACATTTTCCA CTATTTTTGA 12509 .......... .......... .......... .......... .......... .......... 429 GGCTAAAGGT AAGATTTTCA TTTCCTGAAT CCATTTTTCG ATCCTTAGAA GTTAGATTCG 12569 .......... .......... .......... .......... .......... .......... 429 TGGGTAATTA TTGTTGGGGA AGGGTTTTAG GTTTTTTGGA TGGTGGGAAA AACTCTAATT 12629 .......... .......... .......... .......... .......... .......... 429 TGGTCATGGG ATCATGAGTC TGATCTAAGG TTGATCATGT TGAATTTAAT CCAGGTAATT 12689 .......... .......... .......... .......... .......... .......... 429 AAATATTATT TATTGATCCC CGTGTTATAT TGATTGTTTG AAGTCCATGC GAAAAAAATT 12749 .......... .......... .......... .......... .......... .......... 429 CAAAAAGGGA AGAATTAAGT TTGTTAAGGA ATTCAAGCTT TGTTCGAGGT AGGTGATGGT 12809 .......... .......... .......... .......... .......... .......... 429 TGTGATTCAT ATTGTATGAT ATATGTTGGT ATTTGCTTCA TTATAATGTA TGCATGTATG 12869 .......... .......... .......... .......... .......... .......... 429 AGAATGTTGC ATTGTGGATT TCACTAATCG TAAATGAGGA TATATAATTG CATGCCATGA 12929 .......... .......... .......... .......... .......... .......... 429 ATCACGACTT GATTGTATGA TTATGAGAAT GTTCATTGTG ATTGTGGCTT GGTGAGTGGA 12989 .......... .......... .......... .......... .......... .......... 429 TTGGGTGTTA CGTTCTAACA CACTAATTGG GACTGGTTTC CACGTACCGT AATAACATTG 13049 .......... .......... .......... .......... .......... .......... 429 GAATGGATGT CACGATCTGA CATACTAACT TAGAATAGGT ACCACGTACC GGTACACTAA 13109 .......... .......... .......... .......... .......... .......... 429 TAGTTTGGGT GTGTATTCGA TGAAAGGGCC ATTGACTTGA CATAATTGTG TATATTGAGA 13169 .......... .......... .......... .......... .......... .......... 429 ATTGTGAAAC TATATGTGGT TCGTAAGTGA TAAGTGATAT TGTATATGTT CGATATATGC 13229 .......... .......... .......... .......... .......... .......... 429 ATTTTTATTA TGTTGTAATG GTTTATGTAT GTTGCACTCA GTGAAATAGT CGTGTGATTC 13289 .......... .......... .......... .......... .......... .......... 429 TATCAATAAT TGTGGTTGTG TACTGATACT ACACTTGCTC TTTCCTTGTT GAGTACAGTG 13349 .......... .......... .......... .......... .......... .......... 429 CATCTTCAGG AGACTACTGA CAAACTTCGC TTAGAAGATC GGTGATTAGT CGAATTCAAG 13409 .......... .......... .......... .......... .......... .......... 429 GGTGAGTCAG TTCTTCCAAG CTGCCATGAG TTCTCTTTTC GTTTATGACC CTATTTAGGA 13469 .......... .......... .......... .......... .......... .......... 429 TTTAAATTAG TACTTAGGAT TTTCTTGTGT TTAAATGGGT TGTACCCATT TTTTTAGACT 13529 .......... .......... .......... .......... .......... .......... 429 TATTGAACTT TAGATGTTTT TGTACATTGA CTTTCATGTT TTAGGCATTA TTTCTGCATT 13589 .......... .......... .......... .......... .......... .......... 429 TGGTTGTTGG ACTTTTATTG GAGTTTATGG GAACTCCCTA TCTTTCCTTT AGTATTTAAA 13649 .......... .......... .......... .......... .......... .......... 429 CCTACTTTTG TAATTTTAAA TGTCTTAGTT TTGATTAAGT TGTGTAGTTC TTGGTTAGCT 13709 .......... .......... .......... .......... .......... .......... 429 AATTAGTATC AATGGTTTTT CCACTGGGGG GTTAGTGTGG GTGTCTATCA CGATGGTCTG 13769 .......... .......... .......... .......... .......... .......... 429 GATCGTGACA CATAAATATG AACACGATAC ATACTAATTT GTGTTTCAAT CAATTAAGGT 13829 .......... .......... .......... .......... .......... .......... 429 TATGTACTAT AACTAATATT TGAACACGAT ACATTATGCA TGATAAAATT GTAATGTATC 13889 .......... .......... .......... .......... .......... .......... 429 ATAGTGTTAA AACAAAGTAA TTATACATTA ATTTAAGAAA CAAAAACAAC TAGATACATC 13949 .......... .......... .......... .......... .......... .......... 429 AAAAATCTAA ACTCATATGT ATCAGAAAAA AATGAACAAC AAAACATAAT AATCGATAAT 14009 .......... .......... .......... .......... .......... .......... 429 TTGATATGTT GAAAGCAAAA AAAAATATGA AGAGATCCTT CTATACTTTC TCATTTGCTC 14069 .......... .......... .......... .......... .......... .......... 429 TATATCAAAT CCCGTAGCTA CTTTTCCACT TTCCATAATG GCGCCACCTG CAGATCTCGA 14129 .......... .......... .......... .......... .......... .......... 429 TCCAATGCCT TTATCGGAGC CACTATTAAC TCGACCTTCT CCCTCATTTT TAGAGTGTTT 14189 .......... .......... .......... .......... .......... .......... 429 TTTCAAAGTC GATTCAATCG AAAATACATC CTTTGGGTAA TCACAATACA AAAGATGAAG 14249 .......... .......... .......... .......... .......... .......... 429 CGTCAACAAT ATGTATTCCA AATTTAGAGA GGAAAAAGCT ATAAAAAAAA TTAAAAGCGA 14309 .......... .......... .......... .......... .......... .......... 429 TAATGAATGA ACTGGAAAAA AATGGATGAA GAGCTATTTT GCAATGATAC CATGGATTGA 14369 .......... .......... .......... .......... .......... .......... 429 TAGAGGTAGT TAGAGATACC ATGAAGTCAT TTCGACTTTA AAAAAAATAA TGAGTGATTA 14429 .......... .......... .......... .......... .......... .......... 429 TTTAGAATGA TATATCTAGA AAAGTGATCG AAATAATAAA ATAATAATAG TAAATAGGAT 14489 .......... .......... .......... .......... .......... .......... 429 AAAAAAAATG TGTACTTGGT AATTTTTCCT TTTTTTAAAA ATAAAGAACC CTTTTTAGAA 14549 .......... .......... .......... .......... .......... .......... 429 GTTAAGTCAA ATGGGCTTTA AGTCCTCTCT CTTCTAATTC CTATATATGC ATCCCTATTT 14609 .......... .......... .......... .......... .......... .......... 429 TAGAATTTAT TATTCCTTCG CCTCCTAAGG TAGCTTGACT CGGCATAGAG TTTTAGAAAG 14669 .......... .......... .......... .......... .......... .......... 429 AAATAAAAAA AATTTAAAAA AATTAACTTA AATAAAGATA GAAATTTGTG TGGTTATAAA 14729 .......... .......... .......... .......... .......... .......... 429 TAATTTCATT AAGAATAATA TAATATTTTA TAGTCAAATT GTTATTGAAT GTAGACATAT 14789 .......... .......... .......... .......... .......... .......... 429 CTCATTCTTT TTGGGACTAT CTAAAAAGAA CAATAATTCA CATAAAGTGA GACACAGAAA 14849 .......... .......... .......... .......... .......... .......... 429 GAAACTTTAA ATCTAAAATA AATAATATAT TTGATATAAA ATTATTAGTT AGTAAAATAA 14909 .......... .......... .......... .......... .......... .......... 429 TATATAATTT TTCCAAATGA TATACATAGT ATAGTAGCTT CGTATAAATA GTAGAAAAAA 14969 .......... .......... .......... .......... .......... .......... 429 AAGTTAACCG TTAATTAGAA TGACAAAAAA TGATATAAAA CTGAATGGAA GACAACCATT 15029 .......... .......... .......... .......... .......... .......... 429 TATTTATTTC ATACATAGCA TTAACACAAC TAGCAATCAG CTATCGATCG AGCTGATACA 15089 .......... .......... .......... .......... .......... .......... 429 TTTTAACATA AAACATAACT CAAACCACAC ATAATTATAC TAATTAAACA TAAAATTTGG 15149 .......... .......... .......... .......... .......... .......... 429 CACCATAGCC ACCAACTCAT GCAGACTTTA ACAATCCTCA AGCTTGATCT CCACACTTTC 15209 .......... .......... .......... .......... .......... .......... 429 AATGGACACT TCTTCACCGC CAGCTTTTGG AACCAAAGTC ACCGCAATAG TATCTTCATC 15269 .......... .......... .......... .......... .......... .......... 429 TTCCAATCCA ATATCCTCCA ACAGTTCAGT TATCGCCAGC TTGAAAGTAA CACTGGTAAC 15329 .......... .......... .......... .......... .......... .......... 429 ATGATTAGTA TTACTTCCAT GAACATGCGG CAAGCTAGTA TAACTCCCTG CAAACTCCGC 15389 .......... .......... .......... .......... .......... .......... 429 CTTATCAAGC TCATCTGCAT TCACAGTCTT GTCCACGTTC AGAAACACAT CGAACCTTAC 15449 .......... .......... .......... .......... .......... .......... 429 ATAGTTCCTA TCATCATACG ATATTTTATT GAATGTCAGT ATCTCCTCTT GCTCATTTTT 15509 .......... .......... .......... .......... .......... .......... 429 CTCTTGTGTT GTCCTTGACG AGGCTGGCCG CGTGATAGAG AACGAAATCG CACGGTCCAG 15569 .......... .......... .......... .......... .......... .......... 429 CTTCGCCAAT GGGAACACCT TGCTAACTGG TGCAATTGAC GCTGTATTCA CTTTTCCTGA 15629 .......... .......... .......... .......... .......... .......... 429 TGATGACTTT CTGATTGGTT TAAAATTACG CCATGGAGTG GGCATTGGCG CGTAATCGAA 15689 .......... .......... .......... .......... .......... .......... 429 TCCCATTTTT TTACTGTCCA AACAGTCACG GACTTTCACA CGGTAAGGGT TACGATTTTC 15749 .......... .......... .......... .......... .......... .......... 429 ATCGTAGAAA AAGAATTCAG AGTTCAACCA ATCTTTATCT GTTAAATCCC TTCTTTTCCC 15809 .......... .......... .......... .......... .......... .......... 429 GCCAATTAAT TTCCATTCAT TCCACATCCT GTCCACATTG GCATGGTGGC AGTAAAAAAT 15869 .......... .......... .......... .......... .......... .......... 429 CGGATCTAAA CCGGCTGAGT AGAAATTACC CATGTCTTCA CCGTTTTTTT GACGAGGTTT 15929 .......... .......... .......... .......... .......... .......... 429 GTCACCGGTC CAGATGTGAA CCGGAGTATG AGGGATGTTT TCAATAGTAC CCTGACCCGG 15989 .......... .......... .......... .......... .......... .......... 429 ACTTGGTTCA GAACCCAGAG GGTAAGCAGC ACCGAAGAAT TGGGAAGGGC AAGGAGCATT 16049 .......... .......... .......... .......... .......... .......... 429 AGTAACCATT TGACGGTACA TTAGGGTTAA ATTATTAGTC ATTATCTGTA GCTGAGGTGT 16109 .......... .......... .......... .......... .......... .......... 429 GTCAACTTCC TTACCAAAAT GACCAAGATC AATAATAGTT CCATTGCGAT GATTTTGGTT 16169 .......... .......... .......... .......... .......... .......... 429 ACGTTTCTCA TCGTAAAGAG ATGATCCCTC ACGATCAAAC ATGGGAGGTA TACGCATGCC 16229 .......... .......... .......... .......... .......... .......... 429 TTTTGGATGA TCCCAATTCC AGTAAGGTAA AGCAAAAGTT GGATCATTAA TAAGTGATCC 16289 .......... .......... .......... .......... .......... .......... 429 CAAAATTCTT TCGTAAAAGT ACAAGTACCA TCTATGAAAG GGAAAGAAAA GCCACGAGAA 16349 .......... .......... .......... .......... .......... .......... 429 ATGAACTTGC AATTCTTTAC CACCAACTTT GTAAGCACCG TTGCAATAAG CACAATGAAT 16409 .......... .......... .......... .......... .......... .......... 429 ATTAGCTTGT TGTTTAAAGC CAAGAGGGTC AAAGGGGTCT TTATCAAGTT CCCTCATTCG 16469 .......... .......... .......... .......... .......... .......... 429 ACTCGTAGCC AATTGATACT TGGCTACGTA CTCCTCATCC GCCGCATGAG CAGGGGGGCG 16529 .......... .......... .......... .......... .......... .......... 429 GATGCGGAGT TTAGTCATAG AAGGGAACTT GTAGTACGGA ACACTATCGA TATCATCGGG 16589 .......... .......... .......... .......... .......... .......... 429 TACAGGAGGG CAACAACTGT ATATTACATC AACACCTTCT TTTACATGGG CAGTACCACA 16649 .......... .......... .......... .......... .......... .......... 429 AGACTTGAGA TCAGGAGGTG GTATAGGTGC AGCAGTCGCT AATGGTGCAA GATTAGCTGC 16709 .......... .......... .......... .......... .......... .......... 429 ACCATAAAGA CCTCCTAACC CTAAAAGAAC GTTTCGTCTA TCAACAGCGT CAGGGTTTTT 16769 .......... .......... .......... .......... .......... .......... 429 GTCAACGTTG TTTGCGTTGC ATGAAACCTT GAAACTTTGA TTACGCCTTC CGTGGAGGAA 16829 .......... .......... .......... .......... .......... .......... 429 AAGTTGAGAG GGTTTTGATA ACAAGGATGA GTTGGTGGTG GTGAAGGAAG AAGAGAGGGA 16889 .......... .......... .......... .......... .......... .......... 429 TTTGTTGGTG CATAAAGGAA GAGTAGTAGT AATAGAAGAA GAAGAAGACA TTGTGTTGTG 16949 .......... .......... .......... .......... .......... .......... 429 ATGGAGTGAT TTTTGTTTGA AGAGATGCAA CCTTTATATA TACACAAAAT GGTGAAGGTA 17009 .......... .......... .......... .......... .......... .......... 429 TATTGTAGCA CAAAATGTGT AACACGTTGC TGATAATTGT AGATCTTATC TTGGAGTATT 17069 .......... .......... .......... .......... .......... .......... 429 TACTCACTCT CTCCCCACAA TGTATGTGAG GGTGTGACAC CGTTCGTCAG TCGGATGAGG 17129 .......... .......... .......... .......... .......... .......... 429 AAAAGGCAAA TGGTATTTTA TTCGGCTTTT GATCATAGAT TTTTAAATAT ATTTGAAATA 17189 .......... .......... .......... .......... .......... .......... 429 ACGATGATAA TAATAATAGT CGTAATAATA ATAATCTTTA TATATTCTAC GAGACAATTT 17249 .......... .......... .......... .......... .......... .......... 429 TTTAAAGGCC AGCACGTAAA TTAATTAGAT TAGGAATGTG CTTAATGAGG AGGAATGGTA 17309 .......... .......... .......... .......... .......... .......... 429 CATACAATCG GTTAGTGTCA TAAATAGATT GATTTTTTTA ATATAAAATA CAAAACTTTG 17369 .......... .......... .......... .......... .......... .......... 429 GGATAAGTTT TAAGACTTTT TTAGGGAAAA AAACTCAACA ATTATATTTT GGCCTAGAAT 17429 .......... .......... .......... .......... .......... .......... 429 TTATACTTCT ATAGATTTTA AATTTTTTTT ATCAAATTTA ACTTCTAAAA CTAGACACTA 17489 .......... .......... .......... .......... .......... .......... 429 AAATTTACCA ATTAAATTTT ATAAAATGAA AATAAAATAA AGGGAAATAA GGGCCACAAA 17549 .......... .......... .......... .......... .......... .......... 429 AGCCAAACAT AGAAGTGCAT GGAAGTAATA AGAAAAGATC ATCGCATTAT TTCTGACCCC 17609 .......... .......... .......... .......... .......... .......... 429 AATGAAGGAT ATTATTGTCC ATACTATGCT GATTTTATTA TACCTGGCCT AGAAAGATTT 17669 .......... .......... .......... .......... .......... .......... 429 AAGACTTCAA TCTGCGGATT ATGTTATTTC AAAATTAATT TATTTTATTT AAAAGAGGAG 17729 |||| .......... .......... .......... .......... .......... .....AGGAT 434 ATAA-ATAAT GACAAAGTGA A 17749 |||| || || |||| | | ATAACATGAT TCAAAAGACA A 455 hqPGS_C08HBa0336I24.1+_SGN-E540411+ (11334 11654) ******************************************************************************** EST sequence 197 -strand 858 n (File: SGN-E540411-) 1 TACATCAGTA TACGCGATTA ATCGCATGGT GAATACAGAA ACAAAGTTAG GGGATTTGTG 61 TTACCCTCTG GGGTCCAACT CATATTGGCA ACAATGTTAG TGCATCATGA TACTGAAATA 121 TGGGGAGATG ATGCAATGGA GTTTATGCCA GAGAGATTTA GTGAAGGAAT ATCAAAAGCA 181 ACAAAAGGAC AAGTTGTATT TTTTCCATTT AGTTGGGGTC CAAGAATATG TATTGGGCAA 241 AATTTTGCTA TGTTAGAGGC AAAAATGGCA ATGGTCATGA TTCTAAAACA TTATGCATTT 301 GAACTCTCTC CATCTTATGC TCATGCTCCT CACCCATTGT TGCTTCAACC TCAATATGGT 361 GCTCAATTGA TCATGCACAA GTTGTAGAAG TGGTTATCAC GTGTTGTCTT TTGAATCATG 421 TTATATCCTT TATTTATTGT TGGGATAATG TCCAAGTACC CCCTTAGCCT ATGTCCAAAA 481 TCTCAGAGAT ACACTTATAC CATACTAAGA TCTTATTACC CCCTGAACTT ATTTATTAAT 541 AATTTTTTAC CCCTTTTAGA CCTACGTGGC ACTATCTTGT GGGCCCAATG GTTGTTGACT 601 TTTTTTTTAA ACTAGTGCCA CGTAGGCTAA AAAGGGGTAG AAAATTACTT ATAAAATAAG 661 TTCAGGGGGG TAATAGGACC TTAGTATAGT ATAAGTGTGT CTCTGGAATT TCGGGCATAG 721 GTTGAGGGGG TACTTGTGCA TTATCCCTTT ATTGTTCTTT AATTATAGTT CAAGTGAAGT 781 CATATGTTGT TTTGTATAAG ACTGGAGAAT TTTATAATAA TAATATTAGT GTACTTTATG 841 TTTATGAGAA AAAAAAAA Predicted gene structure (within gDNA segment 5478 to 13513): Exon 1 11334 11640 ( 307 n); cDNA 443 746 ( 304 n); score: 0.891 Intron 1 11641 12255 ( 615 n); Pd: 0.000 (s: 0.90), Pa: 0.480 (s: 0) Exon 2 12256 12269 ( 14 n); cDNA 747 760 ( 14 n); score: 0.643 PPA cDNA 847 858 MATCH C08HBa0336I24.1+ SGN-E540411- 0.891 321 0.374 C PGS_C08HBa0336I24.1+_SGN-E540411- (11334 11640,12256 12269) Alignment (genomic DNA sequence = upper lines): GGATAATTCC CAAGTACCCC CTCAACCTAT GCCCGAAATC TCAGAGACAC ACTTATACTA 11393 ||||||| | |||||||||| || | ||||| | || ||||| ||||||| || |||||||| | GGATAATGTC CAAGTACCCC CTTAGCCTAT GTCCAAAATC TCAGAGATAC ACTTATACCA 502 TACTAAGGTC CTATTACCCC CATGAACTTA TATTATTAAT AATTTTTTAC CCCTTTTTAG 11453 ||||||| || ||||||||| | |||||||| | |||||||| |||||||||| ||||||| TACTAAGATC TTATTACCCC C-TGAACTTA T-TTATTAAT AATTTTTTAC CCCTTTTAGA 560 CCCACGTGGC ACTATCTTGT GGGCCCAACG ATGGTTGATT TTTTTGTTTC AAACTAGTGT 11513 || ||||||| |||||||||| |||||||| | | ||||| | ||||| ||| ||||||||| CCTACGTGGC ACTATCTTGT GGGCCCAATG GTTGTTGACT TTTTT-TTT- AAACTAGTGC 618 CGCGTAAGCT AAAAAGGGGT AGAGAATTAC TTATAAAATA AGTTCA-GGG GGTAATAGGA 11572 | |||| ||| |||||||||| ||| |||||| |||||||||| |||||| ||| |||||||||| CACGTAGGCT AAAAAGGGGT AGAAAATTAC TTATAAAATA AGTTCAGGGG GGTAATAGGA 678 CCTTAGTATA GTATAAGTGC GTCTCTGGGA TTTCGGGCAT AGGTTGAGGG GATACTTATG 11632 |||||||||| ||||||||| |||||||| | |||||||||| |||||||||| | ||||| || CCTTAGTATA GTATAAGTGT GTCTCTGGAA TTTCGGGCAT AGGTTGAGGG GGTACTTGTG 738 CATTACCCAA ATTTATGATC AAGTTCTTAA TTTGTGATGC CAACTAACAT TTCAACTATC 11692 ||||| || CATTATCC.. .......... .......... .......... .......... .......... 746 ATATTATCCA AGTTTCAAGT CTAAGATTGC ATCCCAAATT TTTCCAACAT CATTATTTAA 11752 .......... .......... .......... .......... .......... .......... 746 ATGGTACTCA CAAAATACCA TTCATTCAAT ATTTAAATAT ACATACCAAT ATATCAAAAT 11812 .......... .......... .......... .......... .......... .......... 746 TTAAACTATA ATCTAATAAC TAAGACTATG AAAATTATAC CGAAATGAAT ACACATTAAC 11872 .......... .......... .......... .......... .......... .......... 746 TCTGTGTTAT GTTTTCTTCT TTCCTCCCCA CCAATGATTG GCTCATGAGG GCCAAACATT 11932 .......... .......... .......... .......... .......... .......... 746 GGCCATCATT ACCTATCCAA TTTTATTTTC AATACTTGCC TTAATTTCCA GAATAGTCAT 11992 .......... .......... .......... .......... .......... .......... 746 ATGTAACAAA CATATAGCAA TCTAACCTAA TTTCCATTCC AATAGCACCT AATTAATTTT 12052 .......... .......... .......... .......... .......... .......... 746 ATTATTTTGT ATTTAACATT ACCTCCAATG AAAACTAACC ATTTTTTTTC GATTTACCCC 12112 .......... .......... .......... .......... .......... .......... 746 AACTATACTT AACCATACTG CAACAGATGG AATATTAATT GCACTTTCAA ATTCATTTCT 12172 .......... .......... .......... .......... .......... .......... 746 TAAATTCATA AAATATTGCA TTTACCCATA ATCAATTAAC CAAAAATCAA TTACGACAAA 12232 .......... .......... .......... .......... .......... .......... 746 GTACTAGTGA TTGTTACCTG CAGATCGATA GCTCTTT 12269 | || | ||||| .......... .......... ...CTTTATT GTTCTTT 760 hqPGS_C08HBa0336I24.1+_SGN-E540411- (11334 11640) ******************************************************************************** EST sequence 358 -strand 648 n (File: SGN-E347282-) 1 ACATGAGGCA AGCTAGTATA ACTCCCCGCA AACTCCGCCT TATCAAGTTC TTCTGCATTC 61 ACAGTCTTGT CACGGTTCAA AAACACATTC GAACTTTACA TACTTCGTAT CATCATATGC 121 CATTTTATTG AATGTCAGAA TCTCCTCCTG CTCATTTTTC TCTTGTGTTG TCCTTGACGA 181 AGCTGGCCGC GTGATCGAGA ACGAAATCGC ACGGTCCAGC TTGGCCAGTG GGAACACCTT 241 GCTAACTGGT GCAATTGACG CTGTATTCAC TTTTCCTGAT GATGACCTTC TGATTGGTTT 301 GAAATTACGC CATGGAGTGG GCATTGGCGC GTAATCGAAT CCCATTTTTT TACTATCCAA 361 ACAATCACGG ACTTTCACGC GGTAAGGGTT ACGATTTTCA TCGTAAAGAG ATGAACCCTC 421 ACGATCAAAC ATGGGAGGTA TACGCATACC TTTTGGATGA TCCCAATTCC AGTAAGGTAA 481 AGCAAAAGTT GGATCATTAA TAAGTGACCC CAATATCCTT TCGTAAAAGT ACAAGTACCA 541 TCTATGGAAC GGAAAGAAAA GCCACGAGAA ATGAACTTGC AATTCTTTAC CACCAATTTT 601 ATAAGCACCG TTACAATAAG CACAATGAAT ATTAGCTTGT TGTTTAAA Predicted gene structure (within gDNA segment 14688 to 17027): Exon 1 15352 15758 ( 407 n); cDNA 1 408 ( 408 n); score: 0.928 Intron 1 15759 16187 ( 429 n); Pd: 0.000 (s: 0.92), Pa: 0.151 (s: 0.96) Exon 2 16188 16427 ( 240 n); cDNA 409 648 ( 240 n); score: 0.958 MATCH C08HBa0336I24.1+ SGN-E347282- 0.939 647 0.998 C PGS_C08HBa0336I24.1+_SGN-E347282- (15352 15758,16188 16427) Alignment (genomic DNA sequence = upper lines): ACATGCGGCA AGCTAGTATA ACTCCCTGCA AACTCCGCCT TATCAAGCTC ATCTGCATTC 15411 ||||| |||| |||||||||| |||||| ||| |||||||||| ||||||| || ||||||||| ACATGAGGCA AGCTAGTATA ACTCCCCGCA AACTCCGCCT TATCAAGTTC TTCTGCATTC 60 ACAGTCTTGT CCACGTTCAG AAACACAT-C GAACCTTACA TAGTTCCTAT CATCATACGA 15470 |||||||||| | ||||| |||||||| | |||| ||||| || ||| ||| ||||||| | ACAGTCTTGT CACGGTTCAA AAACACATTC GAACTTTACA TACTTCGTAT CATCATATGC 120 TATTTTATTG AATGTCAGTA TCTCCTCTTG CTCATTTTTC TCTTGTGTTG TCCTTGACGA 15530 ||||||||| |||||||| | ||||||| || |||||||||| |||||||||| |||||||||| CATTTTATTG AATGTCAGAA TCTCCTCCTG CTCATTTTTC TCTTGTGTTG TCCTTGACGA 180 GGCTGGCCGC GTGATAGAGA ACGAAATCGC ACGGTCCAGC TTCGCCAATG GGAACACCTT 15590 ||||||||| ||||| |||| |||||||||| |||||||||| || |||| || |||||||||| AGCTGGCCGC GTGATCGAGA ACGAAATCGC ACGGTCCAGC TTGGCCAGTG GGAACACCTT 240 GCTAACTGGT GCAATTGACG CTGTATTCAC TTTTCCTGAT GATGACTTTC TGATTGGTTT 15650 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| GCTAACTGGT GCAATTGACG CTGTATTCAC TTTTCCTGAT GATGACCTTC TGATTGGTTT 300 AAAATTACGC CATGGAGTGG GCATTGGCGC GTAATCGAAT CCCATTTTTT TACTGTCCAA 15710 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| GAAATTACGC CATGGAGTGG GCATTGGCGC GTAATCGAAT CCCATTTTTT TACTATCCAA 360 ACAGTCACGG ACTTTCACAC GGTAAGGGTT ACGATTTTCA TCGTAGAAAA AGAATTCAGA 15770 ||| |||||| |||||||| | |||||||||| |||||||||| ||||| | ACAATCACGG ACTTTCACGC GGTAAGGGTT ACGATTTTCA TCGTAAAG.. .......... 408 GTTCAACCAA TCTTTATCTG TTAAATCCCT TCTTTTCCCG CCAATTAATT TCCATTCATT 15830 .......... .......... .......... .......... .......... .......... 408 CCACATCCTG TCCACATTGG CATGGTGGCA GTAAAAAATC GGATCTAAAC CGGCTGAGTA 15890 .......... .......... .......... .......... .......... .......... 408 GAAATTACCC ATGTCTTCAC CGTTTTTTTG ACGAGGTTTG TCACCGGTCC AGATGTGAAC 15950 .......... .......... .......... .......... .......... .......... 408 CGGAGTATGA GGGATGTTTT CAATAGTACC CTGACCCGGA CTTGGTTCAG AACCCAGAGG 16010 .......... .......... .......... .......... .......... .......... 408 GTAAGCAGCA CCGAAGAATT GGGAAGGGCA AGGAGCATTA GTAACCATTT GACGGTACAT 16070 .......... .......... .......... .......... .......... .......... 408 TAGGGTTAAA TTATTAGTCA TTATCTGTAG CTGAGGTGTG TCAACTTCCT TACCAAAATG 16130 .......... .......... .......... .......... .......... .......... 408 ACCAAGATCA ATAATAGTTC CATTGCGATG ATTTTGGTTA CGTTTCTCAT CGTAAAGAGA 16190 ||| .......... .......... .......... .......... .......... .......AGA 411 TGATCCCTCA CGATCAAACA TGGGAGGTAT ACGCATGCCT TTTGGATGAT CCCAATTCCA 16250 ||| |||||| |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| TGAACCCTCA CGATCAAACA TGGGAGGTAT ACGCATACCT TTTGGATGAT CCCAATTCCA 471 GTAAGGTAAA GCAAAAGTTG GATCATTAAT AAGTGATCCC AAAATTCTTT CGTAAAAGTA 16310 |||||||||| |||||||||| |||||||||| |||||| ||| || || |||| |||||||||| GTAAGGTAAA GCAAAAGTTG GATCATTAAT AAGTGACCCC AATATCCTTT CGTAAAAGTA 531 CAAGTACCAT CTATGAAAGG GAAAGAAAAG CCACGAGAAA TGAACTTGCA ATTCTTTACC 16370 |||||||||| ||||| || | |||||||||| |||||||||| |||||||||| |||||||||| CAAGTACCAT CTATGGAACG GAAAGAAAAG CCACGAGAAA TGAACTTGCA ATTCTTTACC 591 ACCAACTTTG TAAGCACCGT TGCAATAAGC ACAATGAATA TTAGCTTGTT GTTTAAA 16427 ||||| ||| |||||||||| | |||||||| |||||||||| |||||||||| ||||||| ACCAATTTTA TAAGCACCGT TACAATAAGC ACAATGAATA TTAGCTTGTT GTTTAAA 648 hqPGS_C08HBa0336I24.1+_SGN-E347282- (15352 15758,16188 16427) ******************************************************************************** EST sequence 352 -strand 411 n (File: SGN-E313009-) 1 ATCATCATAT GCCATTTTAT TGAATGTCAG AATCTCCTCC TGCTCATTTT TCTCTTGTGT 61 TGTCCTTGAC GAAGCTGGCC GCGTGATCGA GAACGAAATC GCACGGTCCA GCTTGGCCAG 121 TGGGAACACC TTCTGATTGG TTTGAAATTA CGCCATGGAG TGGGCATTGG CGCGTAATCG 181 AATCCCATTT TTTTACTATC CAAACAATCA CGGACTTTCA CGCGGTAAGG GTTACGATTT 241 TCATCGTAGA AAAAGAATTC AGAGTTCAAC CAATCTTTAT TTGATAAATC CCTTCTTTTC 301 CCGCCAATTA ATTTCCACTC GTTCCACATC CTGTCCACAT TAGCATGGTG ACAGTAGAAA 361 AGCGGGTCTA AACCAGCTGA ATAGAAATTA CCCATGTCTT CACCGTGTCC T Predicted gene structure (within gDNA segment 14732 to 17364): Exon 1 15459 15590 ( 132 n); cDNA 1 132 ( 132 n); score: 0.932 Intron 1 15591 15639 ( 49 n); Pd: 0.000 (s: 0.94), Pa: 0.000 (s: 0.98) Exon 2 15640 15913 ( 274 n); cDNA 133 406 ( 274 n); score: 0.945 MATCH C08HBa0336I24.1+ SGN-E313009- 0.941 406 0.988 C PGS_C08HBa0336I24.1+_SGN-E313009- (15459 15590,15640 15913) Alignment (genomic DNA sequence = upper lines): ATCATCATAC GATATTTTAT TGAATGTCAG TATCTCCTCT TGCTCATTTT TCTCTTGTGT 15518 ||||||||| | ||||||| |||||||||| |||||||| |||||||||| |||||||||| ATCATCATAT GCCATTTTAT TGAATGTCAG AATCTCCTCC TGCTCATTTT TCTCTTGTGT 60 TGTCCTTGAC GAGGCTGGCC GCGTGATAGA GAACGAAATC GCACGGTCCA GCTTCGCCAA 15578 |||||||||| || ||||||| ||||||| || |||||||||| |||||||||| |||| |||| TGTCCTTGAC GAAGCTGGCC GCGTGATCGA GAACGAAATC GCACGGTCCA GCTTGGCCAG 120 TGGGAACACC TTGCTAACTG GTGCAATTGA CGCTGTATTC ACTTTTCCTG ATGATGACTT 15638 |||||||||| || TGGGAACACC TT........ .......... .......... .......... .......... 132 TCTGATTGGT TTAAAATTAC GCCATGGAGT GGGCATTGGC GCGTAATCGA ATCCCATTTT 15698 ||||||||| || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| .CTGATTGGT TTGAAATTAC GCCATGGAGT GGGCATTGGC GCGTAATCGA ATCCCATTTT 191 TTTACTGTCC AAACAGTCAC GGACTTTCAC ACGGTAAGGG TTACGATTTT CATCGTAGAA 15758 |||||| ||| ||||| |||| |||||||||| ||||||||| |||||||||| |||||||||| TTTACTATCC AAACAATCAC GGACTTTCAC GCGGTAAGGG TTACGATTTT CATCGTAGAA 251 AAAGAATTCA GAGTTCAACC AATCTTTATC TGTTAAATCC CTTCTTTTCC CGCCAATTAA 15818 |||||||||| |||||||||| ||||||||| || ||||||| |||||||||| |||||||||| AAAGAATTCA GAGTTCAACC AATCTTTATT TGATAAATCC CTTCTTTTCC CGCCAATTAA 311 TTTCCATTCA TTCCACATCC TGTCCACATT GGCATGGTGG CAGTAAAAAA TCGGATCTAA 15878 |||||| || |||||||||| |||||||||| |||||||| ||||| |||| ||| ||||| TTTCCACTCG TTCCACATCC TGTCCACATT AGCATGGTGA CAGTAGAAAA GCGGGTCTAA 371 ACCGGCTGAG TAGAAATTAC CCATGTCTTC ACCGT 15913 ||| ||||| |||||||||| |||||||||| ||||| ACCAGCTGAA TAGAAATTAC CCATGTCTTC ACCGT 406 hqPGS_C08HBa0336I24.1+_SGN-E313009- (15459 15590,15640 15913) ******************************************************************************** EST sequence 40 +strand 473 n (File: SGN-E227346+) 1 TTTTTTTTTT TTTTTTTTAT TAGAATGACA AAAAATGATA TAAAACTGAA TGGAAGACAA 61 CCATTTATTT ATTTCATACA TAGCATTAAC ACAACTAGCA ATCAGCTATC GATCGAGCTG 121 ATACATTTTA ACATAAAACA TAACTCAAAC CACACATAAT TATACTAATT AAACATAAAA 181 TTTGGCACCA TAGCCACCAA CTCATGCAGA CTTTAACAAT CCTCAAGCTT GATCTCCACA 241 CTTTCAATGG ACACTTCTTC ACCGCCAGCT TTTGGAACCA AAGTCACCGC AATAGTATCT 301 TCATCTTCCA ATCCAATATC CTCCAACAGT TCAGTTATCG CCAGCTTGAA AGTAACACTG 361 GTAACATGAT TAGTATTACT TCCATGAACA TGCGGCAAGC TAGTATAACT CCCTGCAAAC 421 TCCGCCTTAT CAAGCTCATC TGCATTCACA GTCTTGTCCA CGTTCAGAAA CAC Predicted gene structure (within gDNA segment 14203 to 16047): Exon 1 14983 15437 ( 455 n); cDNA 19 473 ( 455 n); score: 1.000 PPA cDNA 18 1 MATCH C08HBa0336I24.1+ SGN-E227346+ 1.000 455 0.962 C PGS_C08HBa0336I24.1+_SGN-E227346+ (14983 15437) Alignment (genomic DNA sequence = upper lines): ATTAGAATGA CAAAAAATGA TATAAAACTG AATGGAAGAC AACCATTTAT TTATTTCATA 15042 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAGAATGA CAAAAAATGA TATAAAACTG AATGGAAGAC AACCATTTAT TTATTTCATA 78 CATAGCATTA ACACAACTAG CAATCAGCTA TCGATCGAGC TGATACATTT TAACATAAAA 15102 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATAGCATTA ACACAACTAG CAATCAGCTA TCGATCGAGC TGATACATTT TAACATAAAA 138 CATAACTCAA ACCACACATA ATTATACTAA TTAAACATAA AATTTGGCAC CATAGCCACC 15162 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATAACTCAA ACCACACATA ATTATACTAA TTAAACATAA AATTTGGCAC CATAGCCACC 198 AACTCATGCA GACTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT GGACACTTCT 15222 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACTCATGCA GACTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT GGACACTTCT 258 TCACCGCCAG CTTTTGGAAC CAAAGTCACC GCAATAGTAT CTTCATCTTC CAATCCAATA 15282 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACCGCCAG CTTTTGGAAC CAAAGTCACC GCAATAGTAT CTTCATCTTC CAATCCAATA 318 TCCTCCAACA GTTCAGTTAT CGCCAGCTTG AAAGTAACAC TGGTAACATG ATTAGTATTA 15342 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTCCAACA GTTCAGTTAT CGCCAGCTTG AAAGTAACAC TGGTAACATG ATTAGTATTA 378 CTTCCATGAA CATGCGGCAA GCTAGTATAA CTCCCTGCAA ACTCCGCCTT ATCAAGCTCA 15402 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTCCATGAA CATGCGGCAA GCTAGTATAA CTCCCTGCAA ACTCCGCCTT ATCAAGCTCA 438 TCTGCATTCA CAGTCTTGTC CACGTTCAGA AACAC 15437 |||||||||| |||||||||| |||||||||| ||||| TCTGCATTCA CAGTCTTGTC CACGTTCAGA AACAC 473 hqPGS_C08HBa0336I24.1+_SGN-E227346+ (14983 15437) ******************************************************************************** EST sequence 7 +strand 319 n (File: SGN-E225303+) 1 TTTTTTTTTT TTTTTTTTTG TTTTTTTTTT TTTTTTCGGA AGGGAAGACA ACCATTCATT 61 TATTTCATAC ATAGCATTAA CACAACTAGC AATCAGGTAT CGATCGAGCT GATACATTTT 121 AACATAAAAC ATAACTCAAA CCACACATAA TTTTACTAAT TAAACATAAA ATTGGGCACC 181 ATAGCCACCA ACTCATGCAA ACTTTAACAA TCCTCAAGCT TGATCTCCAC ACTTTCAATG 241 GACACTTTTT TACCGGCAGC TTTTGGAACC AAAGGCACCG GAATAGTATC TTCATCTTCC 301 AATCCAATAT CCTCCAACA Predicted gene structure (within gDNA segment 13861 to 15902): Exon 1 15012 15292 ( 281 n); cDNA 39 319 ( 281 n); score: 0.961 PPA cDNA 36 1 MATCH C08HBa0336I24.1+ SGN-E225303+ 0.961 281 0.881 C PGS_C08HBa0336I24.1+_SGN-E225303+ (15012 15292) Alignment (genomic DNA sequence = upper lines): GAATGGAAGA CAACCATTTA TTTATTTCAT ACATAGCATT AACACAACTA GCAATCAGCT 15071 ||| |||||| |||||||| | |||||||||| |||||||||| |||||||||| |||||||| | GAAGGGAAGA CAACCATTCA TTTATTTCAT ACATAGCATT AACACAACTA GCAATCAGGT 98 ATCGATCGAG CTGATACATT TTAACATAAA ACATAACTCA AACCACACAT AATTATACTA 15131 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| ATCGATCGAG CTGATACATT TTAACATAAA ACATAACTCA AACCACACAT AATTTTACTA 158 ATTAAACATA AAATTTGGCA CCATAGCCAC CAACTCATGC AGACTTTAAC AATCCTCAAG 15191 |||||||||| ||||| |||| |||||||||| |||||||||| | |||||||| |||||||||| ATTAAACATA AAATTGGGCA CCATAGCCAC CAACTCATGC AAACTTTAAC AATCCTCAAG 218 CTTGATCTCC ACACTTTCAA TGGACACTTC TTCACCGCCA GCTTTTGGAA CCAAAGTCAC 15251 |||||||||| |||||||||| ||||||||| || |||| || |||||||||| |||||| ||| CTTGATCTCC ACACTTTCAA TGGACACTTT TTTACCGGCA GCTTTTGGAA CCAAAGGCAC 278 CGCAATAGTA TCTTCATCTT CCAATCCAAT ATCCTCCAAC A 15292 || ||||||| |||||||||| |||||||||| |||||||||| | CGGAATAGTA TCTTCATCTT CCAATCCAAT ATCCTCCAAC A 319 hqPGS_C08HBa0336I24.1+_SGN-E225303+ (15012 15292) ******************************************************************************** EST sequence 9 +strand 431 n (File: SGN-E225510+) 1 TTTTTTTTTT TTTTTTTTTT TTTTTTTTTT TTTTTTTGGA AGGGGGGACA ACCATTTATT 61 TATTTGATAC ATAGCATTAA CACAACTAGC AATCAGCTAT CGATCGAGCT GATACATTTT 121 AACATAAAAC ATAACTCAGA CCACACATAA TTATACTAAT TAAACATAAA ATTTGGCACC 181 ATAGCCACCA ACTCATGCAG ACTTTAACAA TCCTCAAGCT TGATCTCCAC ACTTTCAATG 241 GACACTTCTT CACCGCCAGC TTTTGGAACC AAAGTCACCG CAATAGTATC TTCATCTTCC 301 AATCCAATAT CCTCCAACAG TTCAGTTATC GCCAGCTTGA AAGTAACACT GGTAACATGA 361 TTAGTATTAC TTCCATGAAC ATGCGGCAAG CTAGTATAAC TCCCTGCAAA CTCCGCCTTA 421 TCAAGCTCAT C Predicted gene structure (within gDNA segment 13960 to 16014): Exon 1 15021 15404 ( 384 n); cDNA 48 431 ( 384 n); score: 0.995 PPA cDNA 37 1 MATCH C08HBa0336I24.1+ SGN-E225510+ 0.995 384 0.891 C PGS_C08HBa0336I24.1+_SGN-E225510+ (15021 15404) Alignment (genomic DNA sequence = upper lines): ACAACCATTT ATTTATTTCA TACATAGCAT TAACACAACT AGCAATCAGC TATCGATCGA 15080 |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| ACAACCATTT ATTTATTTGA TACATAGCAT TAACACAACT AGCAATCAGC TATCGATCGA 107 GCTGATACAT TTTAACATAA AACATAACTC AAACCACACA TAATTATACT AATTAAACAT 15140 |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| GCTGATACAT TTTAACATAA AACATAACTC AGACCACACA TAATTATACT AATTAAACAT 167 AAAATTTGGC ACCATAGCCA CCAACTCATG CAGACTTTAA CAATCCTCAA GCTTGATCTC 15200 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAATTTGGC ACCATAGCCA CCAACTCATG CAGACTTTAA CAATCCTCAA GCTTGATCTC 227 CACACTTTCA ATGGACACTT CTTCACCGCC AGCTTTTGGA ACCAAAGTCA CCGCAATAGT 15260 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACACTTTCA ATGGACACTT CTTCACCGCC AGCTTTTGGA ACCAAAGTCA CCGCAATAGT 287 ATCTTCATCT TCCAATCCAA TATCCTCCAA CAGTTCAGTT ATCGCCAGCT TGAAAGTAAC 15320 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCTTCATCT TCCAATCCAA TATCCTCCAA CAGTTCAGTT ATCGCCAGCT TGAAAGTAAC 347 ACTGGTAACA TGATTAGTAT TACTTCCATG AACATGCGGC AAGCTAGTAT AACTCCCTGC 15380 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTGGTAACA TGATTAGTAT TACTTCCATG AACATGCGGC AAGCTAGTAT AACTCCCTGC 407 AAACTCCGCC TTATCAAGCT CATC 15404 |||||||||| |||||||||| |||| AAACTCCGCC TTATCAAGCT CATC 431 hqPGS_C08HBa0336I24.1+_SGN-E225510+ (15021 15404) ******************************************************************************** EST sequence 26 +strand 580 n (File: SGN-E279519+) 1 TACATAGCAT TAACACAACT AGCAATCAGC TATCGATCGA GCTGATACAT TTTAACATAA 61 AACATAACTC AAACCACACA TAATTATACT AATTAAACAT AAAATTTGGC ACCATAGCCA 121 CCAACTCATG CAGACTTTAA CAATCCTCAA GCTTGATCTC CACACTTTCA ATGGACACTT 181 CTTCACCGCC AGCTTTTGGA ACCAAAGTCA CCGCAATAGT ATCTTCATCT TCCAATCCAA 241 TATCCTCCAA CAGTTCAGTT ATCGCCAGCT TGAAAGTAAC ACTGGTAACA TGATTAGTAT 301 TACTTCCATG AACATGCGGC AAGCTAGTAT AACTCCCTGC AAACTCCGCC TTATCAAGCT 361 CATCTGCATT CACAGTCTTG TCCACGTTCA GAAACACATC GAACCTTACA TAGTTCCTAT 421 CATCATACGA TATTTTATTG AATGTCAGTA TCTCCTCTTG CTCATTTTTC TCTTGTGTTG 481 TCCTTGACGA GGCTGGCCGC GTGATAGAGA ACGAAATCGC ACGGTCCAGC TTCGCCAATG 541 GGAACACCTT GCTAACTGGT GCAATTGACG CTGTATTCAC Predicted gene structure (within gDNA segment 14441 to 16230): Exon 1 15041 15620 ( 580 n); cDNA 1 580 ( 580 n); score: 1.000 MATCH C08HBa0336I24.1+ SGN-E279519+ 1.000 580 1.000 C PGS_C08HBa0336I24.1+_SGN-E279519+ (15041 15620) Alignment (genomic DNA sequence = upper lines): TACATAGCAT TAACACAACT AGCAATCAGC TATCGATCGA GCTGATACAT TTTAACATAA 15100 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACATAGCAT TAACACAACT AGCAATCAGC TATCGATCGA GCTGATACAT TTTAACATAA 60 AACATAACTC AAACCACACA TAATTATACT AATTAAACAT AAAATTTGGC ACCATAGCCA 15160 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACATAACTC AAACCACACA TAATTATACT AATTAAACAT AAAATTTGGC ACCATAGCCA 120 CCAACTCATG CAGACTTTAA CAATCCTCAA GCTTGATCTC CACACTTTCA ATGGACACTT 15220 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAACTCATG CAGACTTTAA CAATCCTCAA GCTTGATCTC CACACTTTCA ATGGACACTT 180 CTTCACCGCC AGCTTTTGGA ACCAAAGTCA CCGCAATAGT ATCTTCATCT TCCAATCCAA 15280 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTCACCGCC AGCTTTTGGA ACCAAAGTCA CCGCAATAGT ATCTTCATCT TCCAATCCAA 240 TATCCTCCAA CAGTTCAGTT ATCGCCAGCT TGAAAGTAAC ACTGGTAACA TGATTAGTAT 15340 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATCCTCCAA CAGTTCAGTT ATCGCCAGCT TGAAAGTAAC ACTGGTAACA TGATTAGTAT 300 TACTTCCATG AACATGCGGC AAGCTAGTAT AACTCCCTGC AAACTCCGCC TTATCAAGCT 15400 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACTTCCATG AACATGCGGC AAGCTAGTAT AACTCCCTGC AAACTCCGCC TTATCAAGCT 360 CATCTGCATT CACAGTCTTG TCCACGTTCA GAAACACATC GAACCTTACA TAGTTCCTAT 15460 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCTGCATT CACAGTCTTG TCCACGTTCA GAAACACATC GAACCTTACA TAGTTCCTAT 420 CATCATACGA TATTTTATTG AATGTCAGTA TCTCCTCTTG CTCATTTTTC TCTTGTGTTG 15520 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCATACGA TATTTTATTG AATGTCAGTA TCTCCTCTTG CTCATTTTTC TCTTGTGTTG 480 TCCTTGACGA GGCTGGCCGC GTGATAGAGA ACGAAATCGC ACGGTCCAGC TTCGCCAATG 15580 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTTGACGA GGCTGGCCGC GTGATAGAGA ACGAAATCGC ACGGTCCAGC TTCGCCAATG 540 GGAACACCTT GCTAACTGGT GCAATTGACG CTGTATTCAC 15620 |||||||||| |||||||||| |||||||||| |||||||||| GGAACACCTT GCTAACTGGT GCAATTGACG CTGTATTCAC 580 hqPGS_C08HBa0336I24.1+_SGN-E279519+ (15041 15620) ******************************************************************************** EST sequence 2 +strand 274 n (File: SGN-E222668+) 1 TTTTTTTTTT TTTTTTTTTT TGAGCACAAA TGACAAATTT ATTTTACAGC CAATCAAATC 61 ATACATAGGA TTAACACAAC TAGCAATCAG CTATCGATCG AGCTGATACA TTTTAACATA 121 AAACATAACT CAAACCACAC ATAATTATAC TAATTAAACA TAAAATTTGG CACCATAGCC 181 ACCAACTCAT GCAGACTTTA ACAATCCTCA AGCTTGATCT CCACACTTTC AATGGACACT 241 TCTTCACCGC CAGCTTTTGG AACCAAAGTC ACCG Predicted gene structure (within gDNA segment 13759 to 15863): Exon 1 15049 15253 ( 205 n); cDNA 70 274 ( 205 n); score: 1.000 PPA cDNA 21 1 MATCH C08HBa0336I24.1+ SGN-E222668+ 1.000 205 0.748 C PGS_C08HBa0336I24.1+_SGN-E222668+ (15049 15253) Alignment (genomic DNA sequence = upper lines): ATTAACACAA CTAGCAATCA GCTATCGATC GAGCTGATAC ATTTTAACAT AAAACATAAC 15108 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAACACAA CTAGCAATCA GCTATCGATC GAGCTGATAC ATTTTAACAT AAAACATAAC 129 TCAAACCACA CATAATTATA CTAATTAAAC ATAAAATTTG GCACCATAGC CACCAACTCA 15168 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAACCACA CATAATTATA CTAATTAAAC ATAAAATTTG GCACCATAGC CACCAACTCA 189 TGCAGACTTT AACAATCCTC AAGCTTGATC TCCACACTTT CAATGGACAC TTCTTCACCG 15228 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCAGACTTT AACAATCCTC AAGCTTGATC TCCACACTTT CAATGGACAC TTCTTCACCG 249 CCAGCTTTTG GAACCAAAGT CACCG 15253 |||||||||| |||||||||| ||||| CCAGCTTTTG GAACCAAAGT CACCG 274 hqPGS_C08HBa0336I24.1+_SGN-E222668+ (15049 15253) ******************************************************************************** EST sequence 45 +strand 767 n (File: SGN-E320453+) 1 GAGAACTAGT CTCGAGTTTT TTTTTTTTTT TTTTTTTAAA TGAAAGACAA CCATTTATTT 61 TTTTATTTCA TAGATAGCAT CAACAAAACT AGCAAGGCAG TAATGAGCTA TCCAGCTGAT 121 ACATTTCATT TTAACATAAC ATAAACATAA CCAAACCACA CACAATTAAA CTAATTAAAC 181 ATAAAATTTG GCACCATAGC CACCAACTCA TGAAGGCTTT AACAATCCTC AAGCTTGATC 241 TCCACACTTT CAATGGATAC ACCTTCACCA CCAACTTTTG GAACCAAAGT TACCGCAATT 301 GTATCTTCAT CTTCCAATCC AATATCCTCC AACAGTTCAG TTATCGCCAG CGTAAAAGTA 361 ACATCCTTAA CATGATTATC ATTATTTCCA TGAACATGAG GCAAGCTAGT ATAACTCCCC 421 GCAAACTCCG CCTTATCAAG TTCTTCTGCA TTCACAGGCT TGTCCACGTT CAAAAACACA 481 TCGAACCTTA CATACTTCGT ATCATCATAT GCCATTTTAT TGAATGTCAG AATCTCCTCC 541 TGCTCATTTT TCTCTTGTGT TGTCCTTGAC GAAGCTGGCC GCGTGATCGA GAACGAAATC 601 GCACGGTCCA GCTTGGCCAG TGGGAACACC TTGCTAACTG GTGCAATTGA CGCTGTATTC 661 ACTTTTCCTG ATGATGACCT TCTGATTGGT TTGAAATTAC GCCATGGAGT GGGCATTGGC 721 GCGTAATCCA ATCCCATTTT TTTACTATCC AAACAAGCAC GGACTTT Predicted gene structure (within gDNA segment 12838 to 16524): Exon 1 15093 15725 ( 633 n); cDNA 137 767 ( 631 n); score: 0.929 PPA cDNA 37 16 MATCH C08HBa0336I24.1+ SGN-E320453+ 0.929 633 0.825 C PGS_C08HBa0336I24.1+_SGN-E320453+ (15093 15725) Alignment (genomic DNA sequence = upper lines): TAACATAAAA CATAACTCAA ACCACACATA ATTATACTAA TTAAACATAA AATTTGGCAC 15152 |||||| ||| |||||| ||| |||||||| | |||| ||||| |||||||||| |||||||||| TAACAT-AAA CATAAC-CAA ACCACACACA ATTAAACTAA TTAAACATAA AATTTGGCAC 194 CATAGCCACC AACTCATGCA GACTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 15212 |||||||||| |||||||| | | |||||||| |||||||||| |||||||||| |||||||||| CATAGCCACC AACTCATGAA GGCTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 254 GGACACTTCT TCACCGCCAG CTTTTGGAAC CAAAGTCACC GCAATAGTAT CTTCATCTTC 15272 ||| || || ||||| ||| |||||||||| |||||| ||| ||||| |||| |||||||||| GGATACACCT TCACCACCAA CTTTTGGAAC CAAAGTTACC GCAATTGTAT CTTCATCTTC 314 CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCTTG AAAGTAACAC TGGTAACATG 15332 |||||||||| |||||||||| |||||||||| ||||||| | ||||||||| ||||||| CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCGTA AAAGTAACAT CCTTAACATG 374 ATTAGTATTA CTTCCATGAA CATGCGGCAA GCTAGTATAA CTCCCTGCAA ACTCCGCCTT 15392 |||| |||| ||||||||| |||| ||||| |||||||||| ||||| |||| |||||||||| ATTATCATTA TTTCCATGAA CATGAGGCAA GCTAGTATAA CTCCCCGCAA ACTCCGCCTT 434 ATCAAGCTCA TCTGCATTCA CAGTCTTGTC CACGTTCAGA AACACATCGA ACCTTACATA 15452 |||||| || |||||||||| ||| |||||| |||||||| | |||||||||| |||||||||| ATCAAGTTCT TCTGCATTCA CAGGCTTGTC CACGTTCAAA AACACATCGA ACCTTACATA 494 GTTCCTATCA TCATACGATA TTTTATTGAA TGTCAGTATC TCCTCTTGCT CATTTTTCTC 15512 ||| ||||| ||||| | | |||||||||| |||||| ||| ||||| |||| |||||||||| CTTCGTATCA TCATATGCCA TTTTATTGAA TGTCAGAATC TCCTCCTGCT CATTTTTCTC 554 TTGTGTTGTC CTTGACGAGG CTGGCCGCGT GATAGAGAAC GAAATCGCAC GGTCCAGCTT 15572 |||||||||| |||||||| | |||||||||| ||| |||||| |||||||||| |||||||||| TTGTGTTGTC CTTGACGAAG CTGGCCGCGT GATCGAGAAC GAAATCGCAC GGTCCAGCTT 614 CGCCAATGGG AACACCTTGC TAACTGGTGC AATTGACGCT GTATTCACTT TTCCTGATGA 15632 |||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCCAGTGGG AACACCTTGC TAACTGGTGC AATTGACGCT GTATTCACTT TTCCTGATGA 674 TGACTTTCTG ATTGGTTTAA AATTACGCCA TGGAGTGGGC ATTGGCGCGT AATCGAATCC 15692 |||| ||||| |||||||| | |||||||||| |||||||||| |||||||||| |||| ||||| TGACCTTCTG ATTGGTTTGA AATTACGCCA TGGAGTGGGC ATTGGCGCGT AATCCAATCC 734 CATTTTTTTA CTGTCCAAAC AGTCACGGAC TTT 15725 |||||||||| || ||||||| | ||||||| ||| CATTTTTTTA CTATCCAAAC AAGCACGGAC TTT 767 hqPGS_C08HBa0336I24.1+_SGN-E320453+ (15093 15725) ******************************************************************************** EST sequence 30 +strand 712 n (File: SGN-E317782+) 1 TTTGAAAGAC AACCATTTAT TTTTTTATTT CATAGATAGC ATCAACAAAA CTAGCAAGGC 61 AGTAATGAGC TATCCAGCTG ATACATTTCA TTTTAACATA ACATAAACAT AACCAAACCA 121 CACACAATTA AACTAATTAA ACATAAAATT TGGCACCATA GCCACCAACT CATGAAGGCT 181 TTAACAATCC TCAAGCTTGA TCTCCACACT TTCAATGGAT ACACCTTCAC CACCAACTTT 241 TGGAACCAAA GTTACCGCAA TTGTATCTTC ATCTTCCAAT CCAATATCCT CCAACAGTTC 301 AGTTATCGCC AGCGTAAAAG TAACATCCTT AACATGATTA TCATTATTTC CATGAACATG 361 AGGCAAGCTA GTATAACTCC CCGCAAACTC CGCCTTATCA AGTTCTTCTG CATTCACAGT 421 CTTGTCCACG TTCAAAAACA CATCGAACCT TACATACTTC GTATCATCAT ATGCCATTTT 481 ATTGAATGTC AGAATCTCCT CCTGCTCATT TTTCTCTTGT GTTGTCCTTG ACGAAGCTGG 541 CCGCGTGATC GAGAACGAAA TCGCACGGTC CAGCTTGGCC AGTGGGAACA CCTTGCTAAC 601 TGGTGCAATT GACGCTGTAT TCACTTTTCC TGATGATGAC CTTCTGATTG GGTTTGAATT 661 ACGCCATGGG AGTGGGCATT GGCGCGTAAT CGAATCCCAT TTTTTTACTA TC Predicted gene structure (within gDNA segment 13218 to 16344): Exon 1 15093 15707 ( 615 n); cDNA 99 712 ( 614 n); score: 0.926 PPA cDNA 30 20 MATCH C08HBa0336I24.1+ SGN-E317782+ 0.926 615 0.864 C PGS_C08HBa0336I24.1+_SGN-E317782+ (15093 15707) Alignment (genomic DNA sequence = upper lines): TAACATAAAA CATAACTCAA ACCACACATA ATTATACTAA TTAAACATAA AATTTGGCAC 15152 |||||| ||| |||||| ||| |||||||| | |||| ||||| |||||||||| |||||||||| TAACAT-AAA CATAAC-CAA ACCACACACA ATTAAACTAA TTAAACATAA AATTTGGCAC 156 CATAGCCACC AACTCATGCA GACTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 15212 |||||||||| |||||||| | | |||||||| |||||||||| |||||||||| |||||||||| CATAGCCACC AACTCATGAA GGCTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 216 GGACACTTCT TCACCGCCAG CTTTTGGAAC CAAAGTCACC GCAATAGTAT CTTCATCTTC 15272 ||| || || ||||| ||| |||||||||| |||||| ||| ||||| |||| |||||||||| GGATACACCT TCACCACCAA CTTTTGGAAC CAAAGTTACC GCAATTGTAT CTTCATCTTC 276 CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCTTG AAAGTAACAC TGGTAACATG 15332 |||||||||| |||||||||| |||||||||| ||||||| | ||||||||| ||||||| CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCGTA AAAGTAACAT CCTTAACATG 336 ATTAGTATTA CTTCCATGAA CATGCGGCAA GCTAGTATAA CTCCCTGCAA ACTCCGCCTT 15392 |||| |||| ||||||||| |||| ||||| |||||||||| ||||| |||| |||||||||| ATTATCATTA TTTCCATGAA CATGAGGCAA GCTAGTATAA CTCCCCGCAA ACTCCGCCTT 396 ATCAAGCTCA TCTGCATTCA CAGTCTTGTC CACGTTCAGA AACACATCGA ACCTTACATA 15452 |||||| || |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| ATCAAGTTCT TCTGCATTCA CAGTCTTGTC CACGTTCAAA AACACATCGA ACCTTACATA 456 GTTCCTATCA TCATACGATA TTTTATTGAA TGTCAGTATC TCCTCTTGCT CATTTTTCTC 15512 ||| ||||| ||||| | | |||||||||| |||||| ||| ||||| |||| |||||||||| CTTCGTATCA TCATATGCCA TTTTATTGAA TGTCAGAATC TCCTCCTGCT CATTTTTCTC 516 TTGTGTTGTC CTTGACGAGG CTGGCCGCGT GATAGAGAAC GAAATCGCAC GGTCCAGCTT 15572 |||||||||| |||||||| | |||||||||| ||| |||||| |||||||||| |||||||||| TTGTGTTGTC CTTGACGAAG CTGGCCGCGT GATCGAGAAC GAAATCGCAC GGTCCAGCTT 576 CGCCAATGGG AACACCTTGC TAACTGGTGC AATTGACGCT GTATTCACTT TTCCTGATGA 15632 |||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCCAGTGGG AACACCTTGC TAACTGGTGC AATTGACGCT GTATTCACTT TTCCTGATGA 636 TGACTTTCTG ATTGGTTTAA AATTACGCCA T-GGAGTGGG CATTGGCGCG TAATCGAATC 15691 |||| ||||| ||||| || |||||||||| | |||||||| |||||||||| |||||||||| TGACCTTCTG ATTGGGTTTG AATTACGCCA TGGGAGTGGG CATTGGCGCG TAATCGAATC 696 CCATTTTTTT ACTGTC 15707 |||||||||| ||| || CCATTTTTTT ACTATC 712 hqPGS_C08HBa0336I24.1+_SGN-E317782+ (15093 15707) ******************************************************************************** EST sequence 42 +strand 675 n (File: SGN-E378013+) 1 TAGTTCGAGT TTTTTTTTTT TTTTTTTGAA AGACAACCAT TTATTTTTTT ATTTCATAGA 61 TAGCATCAAC AAAACTAGCA AGGCAGTAAT GAGCTATCCA GCTGATACAT TTCATTTTAA 121 CATAACATAA ACATAACCAA ACCACACACA ATTAAACTAA TTAAACATAA AATTTGGCAC 181 CATAGCCACC AACTCATGAA GGCTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 241 GGATACACCT TCACCACCAA CTTTTGGAAC CAAAGTTACC GCAATTGTAT CTTCATCTTC 301 CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCGTA AAAGTAACAT CCTTAACATG 361 ATTATCATTA TTTCCATGAA CATGAGGCAA GCTAGTATAA CTCCCCGCAA ACTCCGCCTT 421 ATCAAGTTCT TCTGCATTCA CAGTCTTGTC CACGTTCAAA AACACATCGA ACCTTACATA 481 CTTCGTATCA TCATATGCCA TTTTATTGAA TGTCAGAATC TCCTCCTGCT CATTTTTCTC 541 TTGTGTTGTC CTTGACGAAG CTGGCCGCGT GATCGAGAAC GAAATCGCAC GGTCCAGCTT 601 GGCCAGTGGG AACACCTTGC TAACTGGTGC AATTGACGCT GTATTCACTT TTCCTGATGA 661 TGACCTTCTG ATTGG Predicted gene structure (within gDNA segment 12978 to 16356): Exon 1 15093 15647 ( 555 n); cDNA 123 675 ( 553 n); score: 0.930 PPA cDNA 50 40 MATCH C08HBa0336I24.1+ SGN-E378013+ 0.930 555 0.822 C PGS_C08HBa0336I24.1+_SGN-E378013+ (15093 15647) Alignment (genomic DNA sequence = upper lines): TAACATAAAA CATAACTCAA ACCACACATA ATTATACTAA TTAAACATAA AATTTGGCAC 15152 |||||| ||| |||||| ||| |||||||| | |||| ||||| |||||||||| |||||||||| TAACAT-AAA CATAAC-CAA ACCACACACA ATTAAACTAA TTAAACATAA AATTTGGCAC 180 CATAGCCACC AACTCATGCA GACTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 15212 |||||||||| |||||||| | | |||||||| |||||||||| |||||||||| |||||||||| CATAGCCACC AACTCATGAA GGCTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 240 GGACACTTCT TCACCGCCAG CTTTTGGAAC CAAAGTCACC GCAATAGTAT CTTCATCTTC 15272 ||| || || ||||| ||| |||||||||| |||||| ||| ||||| |||| |||||||||| GGATACACCT TCACCACCAA CTTTTGGAAC CAAAGTTACC GCAATTGTAT CTTCATCTTC 300 CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCTTG AAAGTAACAC TGGTAACATG 15332 |||||||||| |||||||||| |||||||||| ||||||| | ||||||||| ||||||| CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCGTA AAAGTAACAT CCTTAACATG 360 ATTAGTATTA CTTCCATGAA CATGCGGCAA GCTAGTATAA CTCCCTGCAA ACTCCGCCTT 15392 |||| |||| ||||||||| |||| ||||| |||||||||| ||||| |||| |||||||||| ATTATCATTA TTTCCATGAA CATGAGGCAA GCTAGTATAA CTCCCCGCAA ACTCCGCCTT 420 ATCAAGCTCA TCTGCATTCA CAGTCTTGTC CACGTTCAGA AACACATCGA ACCTTACATA 15452 |||||| || |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| ATCAAGTTCT TCTGCATTCA CAGTCTTGTC CACGTTCAAA AACACATCGA ACCTTACATA 480 GTTCCTATCA TCATACGATA TTTTATTGAA TGTCAGTATC TCCTCTTGCT CATTTTTCTC 15512 ||| ||||| ||||| | | |||||||||| |||||| ||| ||||| |||| |||||||||| CTTCGTATCA TCATATGCCA TTTTATTGAA TGTCAGAATC TCCTCCTGCT CATTTTTCTC 540 TTGTGTTGTC CTTGACGAGG CTGGCCGCGT GATAGAGAAC GAAATCGCAC GGTCCAGCTT 15572 |||||||||| |||||||| | |||||||||| ||| |||||| |||||||||| |||||||||| TTGTGTTGTC CTTGACGAAG CTGGCCGCGT GATCGAGAAC GAAATCGCAC GGTCCAGCTT 600 CGCCAATGGG AACACCTTGC TAACTGGTGC AATTGACGCT GTATTCACTT TTCCTGATGA 15632 |||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCCAGTGGG AACACCTTGC TAACTGGTGC AATTGACGCT GTATTCACTT TTCCTGATGA 660 TGACTTTCTG ATTGG 15647 |||| ||||| ||||| TGACCTTCTG ATTGG 675 hqPGS_C08HBa0336I24.1+_SGN-E378013+ (15093 15647) ******************************************************************************** EST sequence 296 -strand 652 n (File: SGN-E378012-) 1 TTTGAAAGAC AACCATTTAT TTTTTTTATT TCATAGATAG CATCAACAAA ACTAGCAAGG 61 CAGTAATGAG CTATCCAGCT GATACATTTC ATTTTAACAT AACATAAACA TAACCAAACC 121 ACACACAATT AAACTAATTA AACATAAAAT TTGGCACCAT AGCCACCAAC TCATGAAGGC 181 TTTAACAATC CTCAAGCTTG ATCTCCACAC TTTCAATGGA TACACCTTCA CCACCAACTT 241 TTGGAACCAA AGTTACCGCA ATTGTATCTT CATCTTCCAA TCCAATATCC TCCAACAGTT 301 CAGTTATCGC CAGCGTAAAA GTAACATCCT TAACATGATT ATCATTATTT CCATGAACAT 361 GAGGCAAGCT AGTATAACTC CCCGCAAACT CCGCCTTATC AAGTTCTTCT GCATTCACAG 421 TCTTGTCCAC GTTCAAAAAC ACATCGAACC TTACATACTT CGTATCATCA TATGCCATTT 481 TATTGAATGT CAGAATCTCC TCCTGCTCAT TTTTCTCTTG TGTTGTCCTT GACGAAGCTG 541 GCCGCGTGAT CGAGAACGAA ATCGCACGGT CCAGCTTGGC CAGTGGGAAC ACCTTGCTAA 601 CTGGTGCAAT TGACGCTGTA TTCACTTTTC CTGATGATGA CCTTCTGATT GG Predicted gene structure (within gDNA segment 13198 to 16346): Exon 1 15093 15647 ( 555 n); cDNA 100 652 ( 553 n); score: 0.930 PPA cDNA 31 20 MATCH C08HBa0336I24.1+ SGN-E378012- 0.930 555 0.851 C PGS_C08HBa0336I24.1+_SGN-E378012- (15093 15647) Alignment (genomic DNA sequence = upper lines): TAACATAAAA CATAACTCAA ACCACACATA ATTATACTAA TTAAACATAA AATTTGGCAC 15152 |||||| ||| |||||| ||| |||||||| | |||| ||||| |||||||||| |||||||||| TAACAT-AAA CATAAC-CAA ACCACACACA ATTAAACTAA TTAAACATAA AATTTGGCAC 157 CATAGCCACC AACTCATGCA GACTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 15212 |||||||||| |||||||| | | |||||||| |||||||||| |||||||||| |||||||||| CATAGCCACC AACTCATGAA GGCTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 217 GGACACTTCT TCACCGCCAG CTTTTGGAAC CAAAGTCACC GCAATAGTAT CTTCATCTTC 15272 ||| || || ||||| ||| |||||||||| |||||| ||| ||||| |||| |||||||||| GGATACACCT TCACCACCAA CTTTTGGAAC CAAAGTTACC GCAATTGTAT CTTCATCTTC 277 CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCTTG AAAGTAACAC TGGTAACATG 15332 |||||||||| |||||||||| |||||||||| ||||||| | ||||||||| ||||||| CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCGTA AAAGTAACAT CCTTAACATG 337 ATTAGTATTA CTTCCATGAA CATGCGGCAA GCTAGTATAA CTCCCTGCAA ACTCCGCCTT 15392 |||| |||| ||||||||| |||| ||||| |||||||||| ||||| |||| |||||||||| ATTATCATTA TTTCCATGAA CATGAGGCAA GCTAGTATAA CTCCCCGCAA ACTCCGCCTT 397 ATCAAGCTCA TCTGCATTCA CAGTCTTGTC CACGTTCAGA AACACATCGA ACCTTACATA 15452 |||||| || |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| ATCAAGTTCT TCTGCATTCA CAGTCTTGTC CACGTTCAAA AACACATCGA ACCTTACATA 457 GTTCCTATCA TCATACGATA TTTTATTGAA TGTCAGTATC TCCTCTTGCT CATTTTTCTC 15512 ||| ||||| ||||| | | |||||||||| |||||| ||| ||||| |||| |||||||||| CTTCGTATCA TCATATGCCA TTTTATTGAA TGTCAGAATC TCCTCCTGCT CATTTTTCTC 517 TTGTGTTGTC CTTGACGAGG CTGGCCGCGT GATAGAGAAC GAAATCGCAC GGTCCAGCTT 15572 |||||||||| |||||||| | |||||||||| ||| |||||| |||||||||| |||||||||| TTGTGTTGTC CTTGACGAAG CTGGCCGCGT GATCGAGAAC GAAATCGCAC GGTCCAGCTT 577 CGCCAATGGG AACACCTTGC TAACTGGTGC AATTGACGCT GTATTCACTT TTCCTGATGA 15632 |||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCCAGTGGG AACACCTTGC TAACTGGTGC AATTGACGCT GTATTCACTT TTCCTGATGA 637 TGACTTTCTG ATTGG 15647 |||| ||||| ||||| TGACCTTCTG ATTGG 652 hqPGS_C08HBa0336I24.1+_SGN-E378012- (15093 15647) ******************************************************************************** EST sequence 53 +strand 642 n (File: SGN-E396266+) 1 CTAGTTCGAG TTTTTTTTTT TTTTTTTTGA AAGACAACCA TTTATTTTTT TATTTCATAG 61 ATAGCATCAA CAAAACTAGC AAGGCAGTAA TGAGCTATCC AGCTGATACA TTTCATTTTA 121 ACATAACATA AACATAACCA AACCACACAC AATTAAACTA ATTAAACATA AAATTTGGCA 181 CCATAGCCAC CAACTCATGA AGGCTTTAAC AATCCTCAAG CTTGATCTCC ACACTTTCAA 241 TGGATACACC TTCACCACCA ACTTTTGGAA CCAAAGTTAC CGCAATTGTA TCTTCATCTT 301 CCAATCCAAT ATCCTCCAAC AGTTCAGTTA TCGCCAGCGT AAAAGTAACA TCCTTAACAT 361 GATTATCATT ATTTCCATGA ACATGAGGCA AGCTAGTATA ACTCCCCGCA AACTCCGCCT 421 TATCAAGTTC TTCTGCATTC ACAGTCTTGT CCACGTTCAA AAACACATCG AACCTTACAT 481 ACTTCGTATC ATCATATGCC ATTTTATTGA ATGTCAGAAT CTCCTCCTGC TCATTTTTCT 541 CTTGTGTTGT CCTTGACGAA GCTGGCCGCG TGATCGAGAA CGAAATCGCA CGGTCCAGCT 601 TGGCCAGTGG GAACACCTTG CTAACTGGTG CAATTGACGC TG Predicted gene structure (within gDNA segment 12968 to 16223): Exon 1 15093 15613 ( 521 n); cDNA 124 642 ( 519 n); score: 0.927 PPA cDNA 28 10 MATCH C08HBa0336I24.1+ SGN-E396266+ 0.927 521 0.812 C PGS_C08HBa0336I24.1+_SGN-E396266+ (15093 15613) Alignment (genomic DNA sequence = upper lines): TAACATAAAA CATAACTCAA ACCACACATA ATTATACTAA TTAAACATAA AATTTGGCAC 15152 |||||| ||| |||||| ||| |||||||| | |||| ||||| |||||||||| |||||||||| TAACAT-AAA CATAAC-CAA ACCACACACA ATTAAACTAA TTAAACATAA AATTTGGCAC 181 CATAGCCACC AACTCATGCA GACTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 15212 |||||||||| |||||||| | | |||||||| |||||||||| |||||||||| |||||||||| CATAGCCACC AACTCATGAA GGCTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 241 GGACACTTCT TCACCGCCAG CTTTTGGAAC CAAAGTCACC GCAATAGTAT CTTCATCTTC 15272 ||| || || ||||| ||| |||||||||| |||||| ||| ||||| |||| |||||||||| GGATACACCT TCACCACCAA CTTTTGGAAC CAAAGTTACC GCAATTGTAT CTTCATCTTC 301 CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCTTG AAAGTAACAC TGGTAACATG 15332 |||||||||| |||||||||| |||||||||| ||||||| | ||||||||| ||||||| CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCGTA AAAGTAACAT CCTTAACATG 361 ATTAGTATTA CTTCCATGAA CATGCGGCAA GCTAGTATAA CTCCCTGCAA ACTCCGCCTT 15392 |||| |||| ||||||||| |||| ||||| |||||||||| ||||| |||| |||||||||| ATTATCATTA TTTCCATGAA CATGAGGCAA GCTAGTATAA CTCCCCGCAA ACTCCGCCTT 421 ATCAAGCTCA TCTGCATTCA CAGTCTTGTC CACGTTCAGA AACACATCGA ACCTTACATA 15452 |||||| || |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| ATCAAGTTCT TCTGCATTCA CAGTCTTGTC CACGTTCAAA AACACATCGA ACCTTACATA 481 GTTCCTATCA TCATACGATA TTTTATTGAA TGTCAGTATC TCCTCTTGCT CATTTTTCTC 15512 ||| ||||| ||||| | | |||||||||| |||||| ||| ||||| |||| |||||||||| CTTCGTATCA TCATATGCCA TTTTATTGAA TGTCAGAATC TCCTCCTGCT CATTTTTCTC 541 TTGTGTTGTC CTTGACGAGG CTGGCCGCGT GATAGAGAAC GAAATCGCAC GGTCCAGCTT 15572 |||||||||| |||||||| | |||||||||| ||| |||||| |||||||||| |||||||||| TTGTGTTGTC CTTGACGAAG CTGGCCGCGT GATCGAGAAC GAAATCGCAC GGTCCAGCTT 601 CGCCAATGGG AACACCTTGC TAACTGGTGC AATTGACGCT G 15613 |||| |||| |||||||||| |||||||||| |||||||||| | GGCCAGTGGG AACACCTTGC TAACTGGTGC AATTGACGCT G 642 hqPGS_C08HBa0336I24.1+_SGN-E396266+ (15093 15613) ******************************************************************************** EST sequence 275 -strand 586 n (File: SGN-E342182-) 1 ATTTCATAGA TAGCATCAAC AAAACTAGCA AGGCAGTAAT GAGCTATCCA GCTGATACAT 61 TTCATTTTAA CATAACATAA ACATAACCAA ACCACACACA ATTAAACTAA TTAAACATAA 121 AATTTGGCAC CATAGCCACC AACTCATGAA GGCTTTAACA ATCCTCAAGC TTGATCTCCA 181 CACTTTCAAT GGATACACCT TCACCACCAA CTTTTGGAAC CAAAGTTACC GCAATTGTAT 241 CTTCATCTTC CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCGTA AAAGTAACAT 301 CCTTAACATG ATTATCATTA TTTCCATGAA CATGAGGCAA GCTAGTATAA CTCCCCGCAA 361 ACTCCGCCTT ATCAAGTTCT TCTGCATTCA CAGTCTTGTC CACGTTCAAA AACACATCGA 421 ACCTTACATA CTTCGTATCA TCATATGCCA TTTTATTGAA TGTCAGAATC TCCTCCTGCT 481 CATTTTTCTC TTGTGTTGTC CTTGACGAAG CTGGCCGCGT GATCGAGAAC GAAATCGCAC 541 GGTCCAGCTT GGCCAGTGGG AACACCTTGC TAACTGGTGC AATTGA Predicted gene structure (within gDNA segment 13468 to 16208): Exon 1 15093 15608 ( 516 n); cDNA 73 586 ( 514 n); score: 0.926 MATCH C08HBa0336I24.1+ SGN-E342182- 0.926 516 0.881 C PGS_C08HBa0336I24.1+_SGN-E342182- (15093 15608) Alignment (genomic DNA sequence = upper lines): TAACATAAAA CATAACTCAA ACCACACATA ATTATACTAA TTAAACATAA AATTTGGCAC 15152 |||||| ||| |||||| ||| |||||||| | |||| ||||| |||||||||| |||||||||| TAACAT-AAA CATAAC-CAA ACCACACACA ATTAAACTAA TTAAACATAA AATTTGGCAC 130 CATAGCCACC AACTCATGCA GACTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 15212 |||||||||| |||||||| | | |||||||| |||||||||| |||||||||| |||||||||| CATAGCCACC AACTCATGAA GGCTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 190 GGACACTTCT TCACCGCCAG CTTTTGGAAC CAAAGTCACC GCAATAGTAT CTTCATCTTC 15272 ||| || || ||||| ||| |||||||||| |||||| ||| ||||| |||| |||||||||| GGATACACCT TCACCACCAA CTTTTGGAAC CAAAGTTACC GCAATTGTAT CTTCATCTTC 250 CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCTTG AAAGTAACAC TGGTAACATG 15332 |||||||||| |||||||||| |||||||||| ||||||| | ||||||||| ||||||| CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCGTA AAAGTAACAT CCTTAACATG 310 ATTAGTATTA CTTCCATGAA CATGCGGCAA GCTAGTATAA CTCCCTGCAA ACTCCGCCTT 15392 |||| |||| ||||||||| |||| ||||| |||||||||| ||||| |||| |||||||||| ATTATCATTA TTTCCATGAA CATGAGGCAA GCTAGTATAA CTCCCCGCAA ACTCCGCCTT 370 ATCAAGCTCA TCTGCATTCA CAGTCTTGTC CACGTTCAGA AACACATCGA ACCTTACATA 15452 |||||| || |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| ATCAAGTTCT TCTGCATTCA CAGTCTTGTC CACGTTCAAA AACACATCGA ACCTTACATA 430 GTTCCTATCA TCATACGATA TTTTATTGAA TGTCAGTATC TCCTCTTGCT CATTTTTCTC 15512 ||| ||||| ||||| | | |||||||||| |||||| ||| ||||| |||| |||||||||| CTTCGTATCA TCATATGCCA TTTTATTGAA TGTCAGAATC TCCTCCTGCT CATTTTTCTC 490 TTGTGTTGTC CTTGACGAGG CTGGCCGCGT GATAGAGAAC GAAATCGCAC GGTCCAGCTT 15572 |||||||||| |||||||| | |||||||||| ||| |||||| |||||||||| |||||||||| TTGTGTTGTC CTTGACGAAG CTGGCCGCGT GATCGAGAAC GAAATCGCAC GGTCCAGCTT 550 CGCCAATGGG AACACCTTGC TAACTGGTGC AATTGA 15608 |||| |||| |||||||||| |||||||||| |||||| GGCCAGTGGG AACACCTTGC TAACTGGTGC AATTGA 586 hqPGS_C08HBa0336I24.1+_SGN-E342182- (15093 15608) ******************************************************************************** EST sequence 11 +strand 568 n (File: SGN-E203308+) 1 TTTTTTTTTT TTTTTTTAAA TGAAAGACAA CCATTTATTT TTTTATTTCA TAGATAGCAT 61 CAACAAAACT AGCAAGGCAG TAATGAGCTA TCCAGCTGAT ACATTTCATT TTAACATAAC 121 ATAAACATAA CCAAACCACA CACAATTAAA CTAATTAAAC ATAAAATTTG GCACCATAGC 181 CACCAACTCA TGAAGGCTTT AACAATCCTC AAGCTTGATC TCCACACTTT CAATGGATAC 241 ACCTTCACCA CCAACTTTTG GAACCAAAGT TACCGCAATT GTATCTTCAT CTTCCAATCC 301 AATATCCTCC AACAGTTCAG TTATCGCCAG CGTAAAAGTA ACATCCTTAA CATGATTATC 361 ATTATTTCCA TGAACATGAG GCAAGCTAGT ATAACTCCCC GCAAACTCCG CCTTATCAAG 421 TTCTTCTGCA TTCACAGTCT TGTCCACGTT CAAAAACACA TCGAACCTTA CATACTTCGT 481 ATCATCATAT GCCATTTTAT TGAATGTCAG AATCTCCTAG TTCTCTCGTG CCGAATTCGG 541 CACGAGGAGA ACTAGTCCGA GTTTTTTT Predicted gene structure (within gDNA segment 13038 to 17002): Exon 1 15093 15483 ( 391 n); cDNA 117 505 ( 389 n); score: 0.918 PPA cDNA 48 38 MATCH C08HBa0336I24.1+ SGN-E203308+ 0.918 391 0.688 C PGS_C08HBa0336I24.1+_SGN-E203308+ (15093 15483) Alignment (genomic DNA sequence = upper lines): TAACATAAAA CATAACTCAA ACCACACATA ATTATACTAA TTAAACATAA AATTTGGCAC 15152 |||||| ||| |||||| ||| |||||||| | |||| ||||| |||||||||| |||||||||| TAACAT-AAA CATAAC-CAA ACCACACACA ATTAAACTAA TTAAACATAA AATTTGGCAC 174 CATAGCCACC AACTCATGCA GACTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 15212 |||||||||| |||||||| | | |||||||| |||||||||| |||||||||| |||||||||| CATAGCCACC AACTCATGAA GGCTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 234 GGACACTTCT TCACCGCCAG CTTTTGGAAC CAAAGTCACC GCAATAGTAT CTTCATCTTC 15272 ||| || || ||||| ||| |||||||||| |||||| ||| ||||| |||| |||||||||| GGATACACCT TCACCACCAA CTTTTGGAAC CAAAGTTACC GCAATTGTAT CTTCATCTTC 294 CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCTTG AAAGTAACAC TGGTAACATG 15332 |||||||||| |||||||||| |||||||||| ||||||| | ||||||||| ||||||| CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCGTA AAAGTAACAT CCTTAACATG 354 ATTAGTATTA CTTCCATGAA CATGCGGCAA GCTAGTATAA CTCCCTGCAA ACTCCGCCTT 15392 |||| |||| ||||||||| |||| ||||| |||||||||| ||||| |||| |||||||||| ATTATCATTA TTTCCATGAA CATGAGGCAA GCTAGTATAA CTCCCCGCAA ACTCCGCCTT 414 ATCAAGCTCA TCTGCATTCA CAGTCTTGTC CACGTTCAGA AACACATCGA ACCTTACATA 15452 |||||| || |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| ATCAAGTTCT TCTGCATTCA CAGTCTTGTC CACGTTCAAA AACACATCGA ACCTTACATA 474 GTTCCTATCA TCATACGATA TTTTATTGAA T 15483 ||| ||||| ||||| | | |||||||||| | CTTCGTATCA TCATATGCCA TTTTATTGAA T 505 hqPGS_C08HBa0336I24.1+_SGN-E203308+ (15093 15483) ******************************************************************************** EST sequence 18 +strand 509 n (File: SGN-E241713+) 1 TAGTTCGAGT TTTTTTTTTT TTTTTTTGAA AGACAACCAT TTATTTTTTT ATTTCATAGA 61 TAGCATCAAC AAAACTAGCA AGGCAGTAAT GAGCTATCCA GCTGATACAT TTCATTTTAA 121 CATAACATAA ACATAACCAA ACCACACACA ATTAAACTAA TTAAACATAA AATTTGGCAC 181 CATAGCCACC AACTCATGAA GGCTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 241 GGATACACCT TCACCACCAA CTTTTGGAAC CAAAGTTACC GCAATTGTAT CTTCATCTTC 301 CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCGTA AAAGTAACAT CCTTAACATG 361 ATTATCATTA TTTCCATGAA CATGAGGCAA GCTAGTATAA CTCCCCGCAA ACTCCGCCTT 421 ATCAAGTTCT TCTGCATTCA CAGTCTTGTC CACGTTCAAA AACACATCGA ACCTTACATA 481 CTTGGTATCA TCATATGCCA TTTTATTGA Predicted gene structure (within gDNA segment 12978 to 16352): Exon 1 15093 15481 ( 389 n); cDNA 123 509 ( 387 n); score: 0.915 PPA cDNA 50 40 MATCH C08HBa0336I24.1+ SGN-E241713+ 0.915 389 0.764 C PGS_C08HBa0336I24.1+_SGN-E241713+ (15093 15481) Alignment (genomic DNA sequence = upper lines): TAACATAAAA CATAACTCAA ACCACACATA ATTATACTAA TTAAACATAA AATTTGGCAC 15152 |||||| ||| |||||| ||| |||||||| | |||| ||||| |||||||||| |||||||||| TAACAT-AAA CATAAC-CAA ACCACACACA ATTAAACTAA TTAAACATAA AATTTGGCAC 180 CATAGCCACC AACTCATGCA GACTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 15212 |||||||||| |||||||| | | |||||||| |||||||||| |||||||||| |||||||||| CATAGCCACC AACTCATGAA GGCTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 240 GGACACTTCT TCACCGCCAG CTTTTGGAAC CAAAGTCACC GCAATAGTAT CTTCATCTTC 15272 ||| || || ||||| ||| |||||||||| |||||| ||| ||||| |||| |||||||||| GGATACACCT TCACCACCAA CTTTTGGAAC CAAAGTTACC GCAATTGTAT CTTCATCTTC 300 CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCTTG AAAGTAACAC TGGTAACATG 15332 |||||||||| |||||||||| |||||||||| ||||||| | ||||||||| ||||||| CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCGTA AAAGTAACAT CCTTAACATG 360 ATTAGTATTA CTTCCATGAA CATGCGGCAA GCTAGTATAA CTCCCTGCAA ACTCCGCCTT 15392 |||| |||| ||||||||| |||| ||||| |||||||||| ||||| |||| |||||||||| ATTATCATTA TTTCCATGAA CATGAGGCAA GCTAGTATAA CTCCCCGCAA ACTCCGCCTT 420 ATCAAGCTCA TCTGCATTCA CAGTCTTGTC CACGTTCAGA AACACATCGA ACCTTACATA 15452 |||||| || |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| ATCAAGTTCT TCTGCATTCA CAGTCTTGTC CACGTTCAAA AACACATCGA ACCTTACATA 480 GTTCCTATCA TCATACGATA TTTTATTGA 15481 || ||||| ||||| | | ||||||||| CTTGGTATCA TCATATGCCA TTTTATTGA 509 hqPGS_C08HBa0336I24.1+_SGN-E241713+ (15093 15481) ******************************************************************************** EST sequence 49 +strand 438 n (File: SGN-E229636+) 1 TTTTTTTTTT TTTTTTAATG AGCTATCCAG CTGATACATT TGATTTTAAC ATAACATAAA 61 CATAACCAAA CCACACACAA TTAAACTAAT TAAACATAAA ATTTGGGACC ATAGCCACCA 121 ACTCATGAAG GCTTTAACAA TCCTCAAGCT TGATCTCCAC ACTTTCAATG GATACACCTT 181 CACCACCAAC TTTTGGAACC AAAGTTACCG GAATTGTATC TTCATCTTCC AATCCAATAT 241 CCTCCAACAG TTCAGTTATC GCCAGCGTAA AAGTAACATC CTTAACATGA TTATCATTAT 301 TTCCATGAAC ATGAGGCAAG CTAGTATAAC TCCCCGCAAA CTCCGCCTTA TCAAGTTCTT 361 CTGCATTCAC AGTCTTGTCC ACGTTTAAAA ACACATCGAA CCTTACATAC TTTGTATCAT 421 CATATGCCAT TTTATTGA Predicted gene structure (within gDNA segment 13688 to 16352): Exon 1 15093 15481 ( 389 n); cDNA 52 438 ( 387 n); score: 0.907 PPA cDNA 16 1 MATCH C08HBa0336I24.1+ SGN-E229636+ 0.907 389 0.888 C PGS_C08HBa0336I24.1+_SGN-E229636+ (15093 15481) Alignment (genomic DNA sequence = upper lines): TAACATAAAA CATAACTCAA ACCACACATA ATTATACTAA TTAAACATAA AATTTGGCAC 15152 |||||| ||| |||||| ||| |||||||| | |||| ||||| |||||||||| ||||||| || TAACAT-AAA CATAAC-CAA ACCACACACA ATTAAACTAA TTAAACATAA AATTTGGGAC 109 CATAGCCACC AACTCATGCA GACTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 15212 |||||||||| |||||||| | | |||||||| |||||||||| |||||||||| |||||||||| CATAGCCACC AACTCATGAA GGCTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 169 GGACACTTCT TCACCGCCAG CTTTTGGAAC CAAAGTCACC GCAATAGTAT CTTCATCTTC 15272 ||| || || ||||| ||| |||||||||| |||||| ||| | ||| |||| |||||||||| GGATACACCT TCACCACCAA CTTTTGGAAC CAAAGTTACC GGAATTGTAT CTTCATCTTC 229 CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCTTG AAAGTAACAC TGGTAACATG 15332 |||||||||| |||||||||| |||||||||| ||||||| | ||||||||| ||||||| CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCGTA AAAGTAACAT CCTTAACATG 289 ATTAGTATTA CTTCCATGAA CATGCGGCAA GCTAGTATAA CTCCCTGCAA ACTCCGCCTT 15392 |||| |||| ||||||||| |||| ||||| |||||||||| ||||| |||| |||||||||| ATTATCATTA TTTCCATGAA CATGAGGCAA GCTAGTATAA CTCCCCGCAA ACTCCGCCTT 349 ATCAAGCTCA TCTGCATTCA CAGTCTTGTC CACGTTCAGA AACACATCGA ACCTTACATA 15452 |||||| || |||||||||| |||||||||| |||||| | | |||||||||| |||||||||| ATCAAGTTCT TCTGCATTCA CAGTCTTGTC CACGTTTAAA AACACATCGA ACCTTACATA 409 GTTCCTATCA TCATACGATA TTTTATTGA 15481 || ||||| ||||| | | ||||||||| CTTTGTATCA TCATATGCCA TTTTATTGA 438 hqPGS_C08HBa0336I24.1+_SGN-E229636+ (15093 15481) ******************************************************************************** EST sequence 32 +strand 497 n (File: SGN-E231932+) 1 TAGTTCGAGT TTTTTTTTTT TTTTTTTGAA AGACAACCAT TTATTTTTTT ATTTCATAGA 61 TAGCATCAAC AAAACTAGCA AGGCAGTAAT GAGCTATCCA GCTGATACAT TTCATTTTAA 121 CATAACATAA ACATAACCAA ACCACACACA ATTAAACTAA TTAAACATAA AATTTGGCAC 181 CATAGCCACC AACTCATGAA GGCTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 241 GGATACACCT TCACCACCAA CTTTTGGAAC CAAAGTTACC GCAATTGTAT CTTCATCTTC 301 CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCGTA AAAGTAACAT CCTTAACATG 361 ATTATCATTA TTTCCATGAA CATGAGGCAA GCTAGTATAA CTCCCCGCAA ACTCCGCCTT 421 ATCAAGTTCT TCTGCATTCA CAGTCTTGTC CACGTTCAAA AACACATCGA ACCTTACATA 481 CTTCGTATGA TCATATG Predicted gene structure (within gDNA segment 12978 to 16232): Exon 1 15093 15467 ( 375 n); cDNA 123 495 ( 373 n); score: 0.920 PPA cDNA 50 40 MATCH C08HBa0336I24.1+ SGN-E231932+ 0.920 375 0.755 C PGS_C08HBa0336I24.1+_SGN-E231932+ (15093 15467) Alignment (genomic DNA sequence = upper lines): TAACATAAAA CATAACTCAA ACCACACATA ATTATACTAA TTAAACATAA AATTTGGCAC 15152 |||||| ||| |||||| ||| |||||||| | |||| ||||| |||||||||| |||||||||| TAACAT-AAA CATAAC-CAA ACCACACACA ATTAAACTAA TTAAACATAA AATTTGGCAC 180 CATAGCCACC AACTCATGCA GACTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 15212 |||||||||| |||||||| | | |||||||| |||||||||| |||||||||| |||||||||| CATAGCCACC AACTCATGAA GGCTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 240 GGACACTTCT TCACCGCCAG CTTTTGGAAC CAAAGTCACC GCAATAGTAT CTTCATCTTC 15272 ||| || || ||||| ||| |||||||||| |||||| ||| ||||| |||| |||||||||| GGATACACCT TCACCACCAA CTTTTGGAAC CAAAGTTACC GCAATTGTAT CTTCATCTTC 300 CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCTTG AAAGTAACAC TGGTAACATG 15332 |||||||||| |||||||||| |||||||||| ||||||| | ||||||||| ||||||| CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCGTA AAAGTAACAT CCTTAACATG 360 ATTAGTATTA CTTCCATGAA CATGCGGCAA GCTAGTATAA CTCCCTGCAA ACTCCGCCTT 15392 |||| |||| ||||||||| |||| ||||| |||||||||| ||||| |||| |||||||||| ATTATCATTA TTTCCATGAA CATGAGGCAA GCTAGTATAA CTCCCCGCAA ACTCCGCCTT 420 ATCAAGCTCA TCTGCATTCA CAGTCTTGTC CACGTTCAGA AACACATCGA ACCTTACATA 15452 |||||| || |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| ATCAAGTTCT TCTGCATTCA CAGTCTTGTC CACGTTCAAA AACACATCGA ACCTTACATA 480 GTTCCTATCA TCATA 15467 ||| ||| | ||||| CTTCGTATGA TCATA 495 hqPGS_C08HBa0336I24.1+_SGN-E231932+ (15093 15467) ******************************************************************************** EST sequence 22 +strand 474 n (File: SGN-E216655+) 1 TTTTTTTTTT TTTTTTTTTT GACATAAAAT TAAATGAAAG ACAACCATTT GGTTTTTTAT 61 TTCATAGATA GCATCAACAA AACTAGCAAG GCAGTAATGA GCTATCCAGC TGATACATTT 121 CATTTTAACA TAACATAAAC ATAACCAAAC CACACACAAT TAAACTAATT AAACATAAAA 181 TTTGGCACCA TAGCCACCAA CTCATGAAGG CTTTAACAAT CCTCAAGCTT GATCTCCACA 241 CTTTCAATGG ATACACCTTC ACCACCAACT TTTGGAACCA AAGTTACCGC AATTGTATCT 301 TCATCTTCCA ATCCAATATC CTCCAACAGT TCAGTTATCG CCAGCGTAAA AGTAACATCC 361 TTAACATGAT TATCATTATT TCCATGAACA TGAGGCAAGC TAGTATAACT CCCCGCAAAC 421 TCCGCCTTAT CAAGTTCTTC TGCATTCACA GTCTTGTCCA CGTTCAAAAA CACA Predicted gene structure (within gDNA segment 12898 to 16408): Exon 1 15093 15438 ( 346 n); cDNA 131 474 ( 344 n); score: 0.922 PPA cDNA 20 1 MATCH C08HBa0336I24.1+ SGN-E216655+ 0.922 346 0.730 C PGS_C08HBa0336I24.1+_SGN-E216655+ (15093 15438) Alignment (genomic DNA sequence = upper lines): TAACATAAAA CATAACTCAA ACCACACATA ATTATACTAA TTAAACATAA AATTTGGCAC 15152 |||||| ||| |||||| ||| |||||||| | |||| ||||| |||||||||| |||||||||| TAACAT-AAA CATAAC-CAA ACCACACACA ATTAAACTAA TTAAACATAA AATTTGGCAC 188 CATAGCCACC AACTCATGCA GACTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 15212 |||||||||| |||||||| | | |||||||| |||||||||| |||||||||| |||||||||| CATAGCCACC AACTCATGAA GGCTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 248 GGACACTTCT TCACCGCCAG CTTTTGGAAC CAAAGTCACC GCAATAGTAT CTTCATCTTC 15272 ||| || || ||||| ||| |||||||||| |||||| ||| ||||| |||| |||||||||| GGATACACCT TCACCACCAA CTTTTGGAAC CAAAGTTACC GCAATTGTAT CTTCATCTTC 308 CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCTTG AAAGTAACAC TGGTAACATG 15332 |||||||||| |||||||||| |||||||||| ||||||| | ||||||||| ||||||| CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCGTA AAAGTAACAT CCTTAACATG 368 ATTAGTATTA CTTCCATGAA CATGCGGCAA GCTAGTATAA CTCCCTGCAA ACTCCGCCTT 15392 |||| |||| ||||||||| |||| ||||| |||||||||| ||||| |||| |||||||||| ATTATCATTA TTTCCATGAA CATGAGGCAA GCTAGTATAA CTCCCCGCAA ACTCCGCCTT 428 ATCAAGCTCA TCTGCATTCA CAGTCTTGTC CACGTTCAGA AACACA 15438 |||||| || |||||||||| |||||||||| |||||||| | |||||| ATCAAGTTCT TCTGCATTCA CAGTCTTGTC CACGTTCAAA AACACA 474 hqPGS_C08HBa0336I24.1+_SGN-E216655+ (15093 15438) ******************************************************************************** EST sequence 13 +strand 413 n (File: SGN-E239647+) 1 TAGTTCGAGT TTTTTTTTTT TTTTTTTGAA AGACAACCAT TTATTTTTTT ATTTCATAGA 61 TAGCATCAAC AAAACTAGCA AGGCAGTAAT GAGCTATCCA GCTGATACAT TTCATTTTAA 121 CATAACATAA ACATAACCAA ACCACACACA ATTAAACTAA TTAAACATAA AATTTGGCAC 181 CATAGCCACC AACTCATGAA GGCTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 241 GGATACACCT TCACCACCAA CTTTTGGAAC CAAAGTTACC GCAATTGTAT CTTCATCTTC 301 CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCGTA AAAGTAACAT CCTTAACATG 361 ATTATCATTA TTTCCATGAA CATGAGGCAG GCTAGTATAA CTCCCCGCAA ACT Predicted gene structure (within gDNA segment 12978 to 16679): Exon 1 15093 15385 ( 293 n); cDNA 123 413 ( 291 n); score: 0.915 PPA cDNA 50 40 MATCH C08HBa0336I24.1+ SGN-E239647+ 0.915 293 0.709 C PGS_C08HBa0336I24.1+_SGN-E239647+ (15093 15385) Alignment (genomic DNA sequence = upper lines): TAACATAAAA CATAACTCAA ACCACACATA ATTATACTAA TTAAACATAA AATTTGGCAC 15152 |||||| ||| |||||| ||| |||||||| | |||| ||||| |||||||||| |||||||||| TAACAT-AAA CATAAC-CAA ACCACACACA ATTAAACTAA TTAAACATAA AATTTGGCAC 180 CATAGCCACC AACTCATGCA GACTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 15212 |||||||||| |||||||| | | |||||||| |||||||||| |||||||||| |||||||||| CATAGCCACC AACTCATGAA GGCTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 240 GGACACTTCT TCACCGCCAG CTTTTGGAAC CAAAGTCACC GCAATAGTAT CTTCATCTTC 15272 ||| || || ||||| ||| |||||||||| |||||| ||| ||||| |||| |||||||||| GGATACACCT TCACCACCAA CTTTTGGAAC CAAAGTTACC GCAATTGTAT CTTCATCTTC 300 CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCTTG AAAGTAACAC TGGTAACATG 15332 |||||||||| |||||||||| |||||||||| ||||||| | ||||||||| ||||||| CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCGTA AAAGTAACAT CCTTAACATG 360 ATTAGTATTA CTTCCATGAA CATGCGGCAA GCTAGTATAA CTCCCTGCAA ACT 15385 |||| |||| ||||||||| |||| |||| |||||||||| ||||| |||| ||| ATTATCATTA TTTCCATGAA CATGAGGCAG GCTAGTATAA CTCCCCGCAA ACT 413 hqPGS_C08HBa0336I24.1+_SGN-E239647+ (15093 15385) ******************************************************************************** EST sequence 51 +strand 411 n (File: SGN-E221730+) 1 TTTTTTTTTT TTTTTTTTTT TAAATGAAAG ACAACCATTT ATTGTGGTAT TTCATAGATA 61 GCATCAACAA AACTAGCAAG GCAGTAATGA GCTATCCAGC TGATACATTT CATTTTAACA 121 TAACATAAAC ATAACCAAAC CACACACAAT TAAACTAATT AAACATAAAA TTTGGCACCA 181 TAGCCACCAA CTCATGAAGG CTTTAACAAT CCTCAAGCTT GATCTCCACA CTTTCAATGG 241 ATACACCTTC ACCACCAACT TTTGGAACCA AAGTTACCGC AATTGTATCT TCATCTTCCA 301 ATCCAATATC CTCCAACAGT TCAGTTATCG CCAGCGTAAA AGTAACATCC TTAACATGAT 361 TATCATTATT TCCATGAACA TGAGGCAAGC TAGTATAACT CCCCGCAAAC T Predicted gene structure (within gDNA segment 12998 to 16679): Exon 1 15093 15385 ( 293 n); cDNA 121 411 ( 291 n); score: 0.918 PPA cDNA 21 1 MATCH C08HBa0336I24.1+ SGN-E221730+ 0.918 293 0.713 C PGS_C08HBa0336I24.1+_SGN-E221730+ (15093 15385) Alignment (genomic DNA sequence = upper lines): TAACATAAAA CATAACTCAA ACCACACATA ATTATACTAA TTAAACATAA AATTTGGCAC 15152 |||||| ||| |||||| ||| |||||||| | |||| ||||| |||||||||| |||||||||| TAACAT-AAA CATAAC-CAA ACCACACACA ATTAAACTAA TTAAACATAA AATTTGGCAC 178 CATAGCCACC AACTCATGCA GACTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 15212 |||||||||| |||||||| | | |||||||| |||||||||| |||||||||| |||||||||| CATAGCCACC AACTCATGAA GGCTTTAACA ATCCTCAAGC TTGATCTCCA CACTTTCAAT 238 GGACACTTCT TCACCGCCAG CTTTTGGAAC CAAAGTCACC GCAATAGTAT CTTCATCTTC 15272 ||| || || ||||| ||| |||||||||| |||||| ||| ||||| |||| |||||||||| GGATACACCT TCACCACCAA CTTTTGGAAC CAAAGTTACC GCAATTGTAT CTTCATCTTC 298 CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCTTG AAAGTAACAC TGGTAACATG 15332 |||||||||| |||||||||| |||||||||| ||||||| | ||||||||| ||||||| CAATCCAATA TCCTCCAACA GTTCAGTTAT CGCCAGCGTA AAAGTAACAT CCTTAACATG 358 ATTAGTATTA CTTCCATGAA CATGCGGCAA GCTAGTATAA CTCCCTGCAA ACT 15385 |||| |||| ||||||||| |||| ||||| |||||||||| ||||| |||| ||| ATTATCATTA TTTCCATGAA CATGAGGCAA GCTAGTATAA CTCCCCGCAA ACT 411 hqPGS_C08HBa0336I24.1+_SGN-E221730+ (15093 15385) ******************************************************************************** EST sequence 110 -strand 703 n (File: SGN-E326202-) 1 AATGAGCTAT CCAGCTGATA CATTTCATTT TAACATACCA TAAACATAAC CCAACCCACA 61 CACAAATTAA ACTAATTAAA CATAAAATTT GGCACCATAG CCACCAACTC ATGAAGGCTT 121 TAACAATCCT CAAGCTTGAT CTCCACACTT TCAATGGATA CACCTTCACC ACCAACTTTT 181 GGAACCAAAG TTACCGCAAT TGTATCTTCA TCTTCCAATC CAATATCCTC CAACAGTTCA 241 GTTATCGCCA GCGTAAAAGT AACATCCTTA ACATGATTAT CATTATTTCC ATGAACATGA 301 GGCAAGCTAG TATAACTCCC CGCAAACTCC GCCTTATCAA GTTCTTCTGC ATTCACAGTC 361 TTGTCCACGT TCAAAAACAC ATCGAACCTT ACATACTTCG TATCATCATA TGCCATTTTA 421 TTGAATGTCA GAATCTCCTC CTGCTCATTT TTCTCTTGTG TTGTCCTTGA CGAAGCTGGC 481 CGCGTGATCG AGAACGAAAT CGCACGGTCC AGCTTGGCCA GTGGGAACAC CTTGCTAACT 541 GGTGCAATTG ACGCTGTATT CACTTTTCCT GATGATGACC TTCTGATTGG TTTGAAATTA 601 CGCCATGGAG TGGGCATTGG CGCGTAATCG AATCCCATTT TTTTACTATC CAAACAATCA 661 CGGACTTTCA CGCGGTAAGG GTTACGATTT TCATCGTAGA AAA Predicted gene structure (within gDNA segment 13818 to 16360): Exon 1 15100 15760 ( 661 n); cDNA 42 703 ( 662 n); score: 0.931 MATCH C08HBa0336I24.1+ SGN-E326202- 0.931 661 0.940 C PGS_C08HBa0336I24.1+_SGN-E326202- (15100 15760) Alignment (genomic DNA sequence = upper lines): AAACATAACT CAAACCACAC ATAA-TTATA CTAATTAAAC ATAAAATTTG GCACCATAGC 15158 ||||||||| ||| |||||| | || ||| | |||||||||| |||||||||| |||||||||| AAACATAACC CAACCCACAC ACAAATTAAA CTAATTAAAC ATAAAATTTG GCACCATAGC 101 CACCAACTCA TGCAGACTTT AACAATCCTC AAGCTTGATC TCCACACTTT CAATGGACAC 15218 |||||||||| || || |||| |||||||||| |||||||||| |||||||||| ||||||| || CACCAACTCA TGAAGGCTTT AACAATCCTC AAGCTTGATC TCCACACTTT CAATGGATAC 161 TTCTTCACCG CCAGCTTTTG GAACCAAAGT CACCGCAATA GTATCTTCAT CTTCCAATCC 15278 ||||||| ||| |||||| |||||||||| |||||||| |||||||||| |||||||||| ACCTTCACCA CCAACTTTTG GAACCAAAGT TACCGCAATT GTATCTTCAT CTTCCAATCC 221 AATATCCTCC AACAGTTCAG TTATCGCCAG CTTGAAAGTA ACACTGGTAA CATGATTAGT 15338 |||||||||| |||||||||| |||||||||| | | |||||| ||| ||| |||||||| AATATCCTCC AACAGTTCAG TTATCGCCAG CGTAAAAGTA ACATCCTTAA CATGATTATC 281 ATTACTTCCA TGAACATGCG GCAAGCTAGT ATAACTCCCT GCAAACTCCG CCTTATCAAG 15398 |||| ||||| |||||||| | |||||||||| ||||||||| |||||||||| |||||||||| ATTATTTCCA TGAACATGAG GCAAGCTAGT ATAACTCCCC GCAAACTCCG CCTTATCAAG 341 CTCATCTGCA TTCACAGTCT TGTCCACGTT CAGAAACACA TCGAACCTTA CATAGTTCCT 15458 || |||||| |||||||||| |||||||||| || ||||||| |||||||||| |||| ||| | TTCTTCTGCA TTCACAGTCT TGTCCACGTT CAAAAACACA TCGAACCTTA CATACTTCGT 401 ATCATCATAC GATATTTTAT TGAATGTCAG TATCTCCTCT TGCTCATTTT TCTCTTGTGT 15518 ||||||||| | ||||||| |||||||||| |||||||| |||||||||| |||||||||| ATCATCATAT GCCATTTTAT TGAATGTCAG AATCTCCTCC TGCTCATTTT TCTCTTGTGT 461 TGTCCTTGAC GAGGCTGGCC GCGTGATAGA GAACGAAATC GCACGGTCCA GCTTCGCCAA 15578 |||||||||| || ||||||| ||||||| || |||||||||| |||||||||| |||| |||| TGTCCTTGAC GAAGCTGGCC GCGTGATCGA GAACGAAATC GCACGGTCCA GCTTGGCCAG 521 TGGGAACACC TTGCTAACTG GTGCAATTGA CGCTGTATTC ACTTTTCCTG ATGATGACTT 15638 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | TGGGAACACC TTGCTAACTG GTGCAATTGA CGCTGTATTC ACTTTTCCTG ATGATGACCT 581 TCTGATTGGT TTAAAATTAC GCCATGGAGT GGGCATTGGC GCGTAATCGA ATCCCATTTT 15698 |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTGATTGGT TTGAAATTAC GCCATGGAGT GGGCATTGGC GCGTAATCGA ATCCCATTTT 641 TTTACTGTCC AAACAGTCAC GGACTTTCAC ACGGTAAGGG TTACGATTTT CATCGTAGAA 15758 |||||| ||| ||||| |||| |||||||||| ||||||||| |||||||||| |||||||||| TTTACTATCC AAACAATCAC GGACTTTCAC GCGGTAAGGG TTACGATTTT CATCGTAGAA 701 AA 15760 || AA 703 hqPGS_C08HBa0336I24.1+_SGN-E326202- (15100 15760) ******************************************************************************** EST sequence 354 -strand 392 n (File: SGN-E317625-) 1 GAAGGCTTTA ACAATCATCA AGCTTGATCT CCACACTTCC AATGGATACA CCTTCACCAC 61 CAACTTTTGG AACCAAAGTT ACCGCAATTG TATCTTCATC TTCCAATCCA ATATCCTCCA 121 ACAGTTCAGT TATCGCCAGC GTAAAAGTAA CATCCTTAAC ATGATTATCA TTATTTCCAT 181 GAACATGAGG CAAGCTAGTA TAACTCCCCG CAAACTCCGC CTTATCAAGT TCTTCTGCAT 241 TCACAGTCTT GTCCACGTTC AAAAACACAT CGAACCTTAC ATACTTCGTA TCATCATATG 301 CCATTTTATT GAATGTCAGA ATCTCCTCCT GCTCATTTTT CTCTTGTGTT GTCCTTGACG 361 AAGCTGGCCG CGTGATCGAG AACGAAATCG CA Predicted gene structure (within gDNA segment 13993 to 16440): Exon 1 15172 15561 ( 390 n); cDNA 3 392 ( 390 n); score: 0.915 MATCH C08HBa0336I24.1+ SGN-E317625- 0.915 390 0.995 C PGS_C08HBa0336I24.1+_SGN-E317625- (15172 15561) Alignment (genomic DNA sequence = upper lines): AGACTTTAAC AATCCTCAAG CTTGATCTCC ACACTTTCAA TGGACACTTC TTCACCGCCA 15231 || ||||||| |||| ||||| |||||||||| |||||| ||| |||| || | |||||| ||| AGGCTTTAAC AATCATCAAG CTTGATCTCC ACACTTCCAA TGGATACACC TTCACCACCA 62 GCTTTTGGAA CCAAAGTCAC CGCAATAGTA TCTTCATCTT CCAATCCAAT ATCCTCCAAC 15291 ||||||||| ||||||| || |||||| ||| |||||||||| |||||||||| |||||||||| ACTTTTGGAA CCAAAGTTAC CGCAATTGTA TCTTCATCTT CCAATCCAAT ATCCTCCAAC 122 AGTTCAGTTA TCGCCAGCTT GAAAGTAACA CTGGTAACAT GATTAGTATT ACTTCCATGA 15351 |||||||||| |||||||| | ||||||||| |||||| ||||| ||| | |||||||| AGTTCAGTTA TCGCCAGCGT AAAAGTAACA TCCTTAACAT GATTATCATT ATTTCCATGA 182 ACATGCGGCA AGCTAGTATA ACTCCCTGCA AACTCCGCCT TATCAAGCTC ATCTGCATTC 15411 ||||| |||| |||||||||| |||||| ||| |||||||||| ||||||| || ||||||||| ACATGAGGCA AGCTAGTATA ACTCCCCGCA AACTCCGCCT TATCAAGTTC TTCTGCATTC 242 ACAGTCTTGT CCACGTTCAG AAACACATCG AACCTTACAT AGTTCCTATC ATCATACGAT 15471 |||||||||| ||||||||| |||||||||| |||||||||| | ||| |||| |||||| | ACAGTCTTGT CCACGTTCAA AAACACATCG AACCTTACAT ACTTCGTATC ATCATATGCC 302 ATTTTATTGA ATGTCAGTAT CTCCTCTTGC TCATTTTTCT CTTGTGTTGT CCTTGACGAG 15531 |||||||||| ||||||| || |||||| ||| |||||||||| |||||||||| ||||||||| ATTTTATTGA ATGTCAGAAT CTCCTCCTGC TCATTTTTCT CTTGTGTTGT CCTTGACGAA 362 GCTGGCCGCG TGATAGAGAA CGAAATCGCA 15561 |||||||||| |||| ||||| |||||||||| GCTGGCCGCG TGATCGAGAA CGAAATCGCA 392 hqPGS_C08HBa0336I24.1+_SGN-E317625- (15172 15561) ******************************************************************************** EST sequence 319 -strand 472 n (File: SGN-E390549-) 1 TTAACAATCC TCAAGCTTGA TCTCCACACT TTCAATGGAT ACACCTTCAC CACCAACTTT 61 TGGAACCAAA GTTACCGCAA TTGTATCTTC ATCTTCCAAT CCAATATCCT CCAACAGTTC 121 AGTTATCGCC AGCGTAAAAG TAACATCCTT AACATGATTA TCATTATTTC CATGAACATG 181 AGGCAAGCTA GTATAACTCC CCGCAAACTC CGCCTTATCA AGTTCTTCTG CATTCACAGT 241 CTTGTCCACG TTCAAAAACA CATCGAACCT TACATACTTC GTATCATCAT ATGCCATTTT 301 ATTGAATGTC AGAATCTCCT CCTGCTCATT TTTCTCTTGT GTTGTCCTTG ACGAAGCTGG 361 CCGCGTGATC GAGAACGAAA TCGCACGGTC CAGCTTGGCC AGTGGGAACA CCTTGCTAAC 421 TGGTGCAATT GACGCTGTAT TCACTTTTCC TGATGATGAC CTTCTGATTG GT Predicted gene structure (within gDNA segment 14567 to 16356): Exon 1 15177 15648 ( 472 n); cDNA 1 472 ( 472 n); score: 0.930 MATCH C08HBa0336I24.1+ SGN-E390549- 0.930 472 1.000 C PGS_C08HBa0336I24.1+_SGN-E390549- (15177 15648) Alignment (genomic DNA sequence = upper lines): TTAACAATCC TCAAGCTTGA TCTCCACACT TTCAATGGAC ACTTCTTCAC CGCCAGCTTT 15236 |||||||||| |||||||||| |||||||||| ||||||||| || |||||| | ||| |||| TTAACAATCC TCAAGCTTGA TCTCCACACT TTCAATGGAT ACACCTTCAC CACCAACTTT 60 TGGAACCAAA GTCACCGCAA TAGTATCTTC ATCTTCCAAT CCAATATCCT CCAACAGTTC 15296 |||||||||| || ||||||| | |||||||| |||||||||| |||||||||| |||||||||| TGGAACCAAA GTTACCGCAA TTGTATCTTC ATCTTCCAAT CCAATATCCT CCAACAGTTC 120 AGTTATCGCC AGCTTGAAAG TAACACTGGT AACATGATTA GTATTACTTC CATGAACATG 15356 |||||||||| ||| | |||| ||||| | |||||||||| |||| ||| |||||||||| AGTTATCGCC AGCGTAAAAG TAACATCCTT AACATGATTA TCATTATTTC CATGAACATG 180 CGGCAAGCTA GTATAACTCC CTGCAAACTC CGCCTTATCA AGCTCATCTG CATTCACAGT 15416 ||||||||| |||||||||| | |||||||| |||||||||| || || |||| |||||||||| AGGCAAGCTA GTATAACTCC CCGCAAACTC CGCCTTATCA AGTTCTTCTG CATTCACAGT 240 CTTGTCCACG TTCAGAAACA CATCGAACCT TACATAGTTC CTATCATCAT ACGATATTTT 15476 |||||||||| |||| ||||| |||||||||| |||||| ||| ||||||||| | | ||||| CTTGTCCACG TTCAAAAACA CATCGAACCT TACATACTTC GTATCATCAT ATGCCATTTT 300 ATTGAATGTC AGTATCTCCT CTTGCTCATT TTTCTCTTGT GTTGTCCTTG ACGAGGCTGG 15536 |||||||||| || ||||||| | |||||||| |||||||||| |||||||||| |||| ||||| ATTGAATGTC AGAATCTCCT CCTGCTCATT TTTCTCTTGT GTTGTCCTTG ACGAAGCTGG 360 CCGCGTGATA GAGAACGAAA TCGCACGGTC CAGCTTCGCC AATGGGAACA CCTTGCTAAC 15596 ||||||||| |||||||||| |||||||||| |||||| ||| | |||||||| |||||||||| CCGCGTGATC GAGAACGAAA TCGCACGGTC CAGCTTGGCC AGTGGGAACA CCTTGCTAAC 420 TGGTGCAATT GACGCTGTAT TCACTTTTCC TGATGATGAC TTTCTGATTG GT 15648 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| || TGGTGCAATT GACGCTGTAT TCACTTTTCC TGATGATGAC CTTCTGATTG GT 472 hqPGS_C08HBa0336I24.1+_SGN-E390549- (15177 15648) ******************************************************************************** EST sequence 279 -strand 529 n (File: SGN-E236547-) 1 CCACCAACTT TTGGAACCAA AGTTACCGCA AATGTATCTT CATCTTCCAA TCCAATATCC 61 TCCAACAGTT CAGTTATCGC CAGCGTAAAA GTAACATCCT TAACATGATT ATCATTATTT 121 CCATGAACAT GAGGCAAGCT AGTATAACTC CCCGCAAACT CCGCCTTATC AAGTTCTTCT 181 GCATTCACAG TCTTGTCCAC GTTCAAAAAC ACATCGAACC TTACATACTT CGTATCATCA 241 TATGCCATTT TATTGAATGT CAGAATCTCC TCCTGCTCAT TTTTCTCTTG TGTTGTCCTT 301 GACGAAGCTG GCCGCGTGAT CGAGAACGAA ATCGCACGGT CCAGCTTGGC CAGTGGGAAC 361 ACCTTGCTAA CTGGTGCAAT TGACGCTGTA TTCACTTTTC CTGATGATGA CCTTCTGATT 421 GGTTTGAAAT TACGCCATGG AGTGGGCATT GGCGCGTAAT CGAATCCCAT TTTTTTACTA 481 TCCAAACAAT CACGGACTTT CACGCGGTAA GGGTTACGAT TTTCATCGT Predicted gene structure (within gDNA segment 14553 to 16804): Exon 1 15226 15754 ( 529 n); cDNA 1 529 ( 529 n); score: 0.934 MATCH C08HBa0336I24.1+ SGN-E236547- 0.934 529 1.000 C PGS_C08HBa0336I24.1+_SGN-E236547- (15226 15754) Alignment (genomic DNA sequence = upper lines): CCGCCAGCTT TTGGAACCAA AGTCACCGCA ATAGTATCTT CATCTTCCAA TCCAATATCC 15285 || ||| ||| |||||||||| ||| |||||| | ||||||| |||||||||| |||||||||| CCACCAACTT TTGGAACCAA AGTTACCGCA AATGTATCTT CATCTTCCAA TCCAATATCC 60 TCCAACAGTT CAGTTATCGC CAGCTTGAAA GTAACACTGG TAACATGATT AGTATTACTT 15345 |||||||||| |||||||||| |||| | ||| |||||| |||||||||| | |||| || TCCAACAGTT CAGTTATCGC CAGCGTAAAA GTAACATCCT TAACATGATT ATCATTATTT 120 CCATGAACAT GCGGCAAGCT AGTATAACTC CCTGCAAACT CCGCCTTATC AAGCTCATCT 15405 |||||||||| | |||||||| |||||||||| || ||||||| |||||||||| ||| || ||| CCATGAACAT GAGGCAAGCT AGTATAACTC CCCGCAAACT CCGCCTTATC AAGTTCTTCT 180 GCATTCACAG TCTTGTCCAC GTTCAGAAAC ACATCGAACC TTACATAGTT CCTATCATCA 15465 |||||||||| |||||||||| ||||| |||| |||||||||| ||||||| || | |||||||| GCATTCACAG TCTTGTCCAC GTTCAAAAAC ACATCGAACC TTACATACTT CGTATCATCA 240 TACGATATTT TATTGAATGT CAGTATCTCC TCTTGCTCAT TTTTCTCTTG TGTTGTCCTT 15525 || | |||| |||||||||| ||| |||||| || ||||||| |||||||||| |||||||||| TATGCCATTT TATTGAATGT CAGAATCTCC TCCTGCTCAT TTTTCTCTTG TGTTGTCCTT 300 GACGAGGCTG GCCGCGTGAT AGAGAACGAA ATCGCACGGT CCAGCTTCGC CAATGGGAAC 15585 ||||| |||| |||||||||| ||||||||| |||||||||| ||||||| || || ||||||| GACGAAGCTG GCCGCGTGAT CGAGAACGAA ATCGCACGGT CCAGCTTGGC CAGTGGGAAC 360 ACCTTGCTAA CTGGTGCAAT TGACGCTGTA TTCACTTTTC CTGATGATGA CTTTCTGATT 15645 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| ACCTTGCTAA CTGGTGCAAT TGACGCTGTA TTCACTTTTC CTGATGATGA CCTTCTGATT 420 GGTTTAAAAT TACGCCATGG AGTGGGCATT GGCGCGTAAT CGAATCCCAT TTTTTTACTG 15705 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| GGTTTGAAAT TACGCCATGG AGTGGGCATT GGCGCGTAAT CGAATCCCAT TTTTTTACTA 480 TCCAAACAGT CACGGACTTT CACACGGTAA GGGTTACGAT TTTCATCGT 15754 |||||||| | |||||||||| ||| |||||| |||||||||| ||||||||| TCCAAACAAT CACGGACTTT CACGCGGTAA GGGTTACGAT TTTCATCGT 529 hqPGS_C08HBa0336I24.1+_SGN-E236547- (15226 15754) ******************************************************************************** EST sequence 239 -strand 351 n (File: SGN-E336881-) 1 TGTATCTTCA TCTTCCAATC CAATATCCTC CAACAGTTCA GTTATCGCCA GCGTAAAAGT 61 AACATCCTTA ACATGATTAT CATTATTTCC ATGAACATGA GGCAAGCTAG TATAACTCCC 121 CGCAAACTCC GCCTTATCAA GTTCTTCTGC ATTCACAGTC TTGTCCACGT TCAAAAACAC 181 ATCGAACCTT ACATACTTCG TATCATCATA TGCCATTTTA TTGAATGTCA GAATCTCCTC 241 CTGCTCATTT TTCTCTTGTG TTGTCCTTGA CGAAGCTGGC CGCGTGATCG AGAACGAAAT 301 CGCACGGTCC AGCTTGGCCA GTGGGAACAC CTTGCTAACT GGTGCAATTG A Predicted gene structure (within gDNA segment 14639 to 16208): Exon 1 15259 15608 ( 350 n); cDNA 2 351 ( 350 n); score: 0.929 MATCH C08HBa0336I24.1+ SGN-E336881- 0.929 350 0.997 C PGS_C08HBa0336I24.1+_SGN-E336881- (15259 15608) Alignment (genomic DNA sequence = upper lines): GTATCTTCAT CTTCCAATCC AATATCCTCC AACAGTTCAG TTATCGCCAG CTTGAAAGTA 15318 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | | |||||| GTATCTTCAT CTTCCAATCC AATATCCTCC AACAGTTCAG TTATCGCCAG CGTAAAAGTA 61 ACACTGGTAA CATGATTAGT ATTACTTCCA TGAACATGCG GCAAGCTAGT ATAACTCCCT 15378 ||| ||| |||||||| |||| ||||| |||||||| | |||||||||| ||||||||| ACATCCTTAA CATGATTATC ATTATTTCCA TGAACATGAG GCAAGCTAGT ATAACTCCCC 121 GCAAACTCCG CCTTATCAAG CTCATCTGCA TTCACAGTCT TGTCCACGTT CAGAAACACA 15438 |||||||||| |||||||||| || |||||| |||||||||| |||||||||| || ||||||| GCAAACTCCG CCTTATCAAG TTCTTCTGCA TTCACAGTCT TGTCCACGTT CAAAAACACA 181 TCGAACCTTA CATAGTTCCT ATCATCATAC GATATTTTAT TGAATGTCAG TATCTCCTCT 15498 |||||||||| |||| ||| | ||||||||| | ||||||| |||||||||| |||||||| TCGAACCTTA CATACTTCGT ATCATCATAT GCCATTTTAT TGAATGTCAG AATCTCCTCC 241 TGCTCATTTT TCTCTTGTGT TGTCCTTGAC GAGGCTGGCC GCGTGATAGA GAACGAAATC 15558 |||||||||| |||||||||| |||||||||| || ||||||| ||||||| || |||||||||| TGCTCATTTT TCTCTTGTGT TGTCCTTGAC GAAGCTGGCC GCGTGATCGA GAACGAAATC 301 GCACGGTCCA GCTTCGCCAA TGGGAACACC TTGCTAACTG GTGCAATTGA 15608 |||||||||| |||| |||| |||||||||| |||||||||| |||||||||| GCACGGTCCA GCTTGGCCAG TGGGAACACC TTGCTAACTG GTGCAATTGA 351 hqPGS_C08HBa0336I24.1+_SGN-E336881- (15259 15608) ******************************************************************************** EST sequence 183 -strand 556 n (File: SGN-E317358-) 1 CAACAGTTCA GTTATCGCCA GCGTAAAAGT ACATCCTTTA CCATGATTAT CATTATTTCC 61 ATGAACATGA GGCAAGCTAG TATAACTCCC CGCAAACTCC GCCTATCAAA GTTCTTCTGC 121 ATTCACAGTC TGTCCCACGT CAAAAAACAC ATCGAACCTT ACATACTTCG TATCATCATA 181 TGCCATTTAT TGAAATGTCA GAATCTCCTC CTGCTCATTT TTCTCTTGTG TTGTCCTTGA 241 CGAAGCTGGC CGCGTGATCG AGAACGAAAT CGCACGGTCC AGCTTGGCCA GTGGGAACAC 301 CTTGCTAACT GGTGCAATTG ACGCTGTATT CACTTTTCCT GATGATGACC TTCTGATTGG 361 TTTGAAATTA CGCCATGGAG TGGGCATTGG CGCGTAATCG AATCCCATTT TTTACTATCC 421 AAACAATCAC GGACTTTCAC GCGGTAAGGG TTACGATTTT CATCGTAGAA AAAGAATTCA 481 GAGTTCAACC AATCTTTATT TGATAAATCC CTTCTTTTCC CGCCAATTAA TTTCCACTCG 541 TTCCACATCC TGTCCA Predicted gene structure (within gDNA segment 13643 to 16624): Exon 1 15288 15844 ( 557 n); cDNA 1 556 ( 556 n); score: 0.910 MATCH C08HBa0336I24.1+ SGN-E317358- 0.910 557 1.002 C PGS_C08HBa0336I24.1+_SGN-E317358- (15288 15844) Alignment (genomic DNA sequence = upper lines): CAACAGTTCA GTTATCGCCA GCTTGAAAGT AACACTGGTA ACATGATTAG TATTACTTCC 15347 |||||||||| |||||||||| || | ||||| | | || |||||||| |||| |||| CAACAGTTCA GTTATCGCCA GCGTAAAAGT ACATCCTTTA CCATGATTAT CATTATTTCC 60 ATGAACATGC GGCAAGCTAG TATAACTCCC TGCAAACTCC GCCTTATC-A AGCTCATCTG 15406 ||||||||| |||||||||| |||||||||| ||||||||| ||| |||| | || || |||| ATGAACATGA GGCAAGCTAG TATAACTCCC CGCAAACTCC GCC-TATCAA AGTTCTTCTG 119 CATTCACAGT CTTGTCCACG TTCAGAAACA CATCGAACCT TACATAGTTC CTATCATCAT 15466 |||||||||| || ||||| | | ||||| |||||||||| |||||| ||| ||||||||| CATTCACAGT CTGTCCCACG TCAAAAAACA CATCGAACCT TACATACTTC GTATCATCAT 179 ACGATATTTT ATTG-AATGT CAGTATCTCC TCTTGCTCAT TTTTCTCTTG TGTTGTCCTT 15525 | | | ||| |||| ||||| ||| |||||| || ||||||| |||||||||| |||||||||| ATGCCA-TTT ATTGAAATGT CAGAATCTCC TCCTGCTCAT TTTTCTCTTG TGTTGTCCTT 238 GACGAGGCTG GCCGCGTGAT AGAGAACGAA ATCGCACGGT CCAGCTTCGC CAATGGGAAC 15585 ||||| |||| |||||||||| ||||||||| |||||||||| ||||||| || || ||||||| GACGAAGCTG GCCGCGTGAT CGAGAACGAA ATCGCACGGT CCAGCTTGGC CAGTGGGAAC 298 ACCTTGCTAA CTGGTGCAAT TGACGCTGTA TTCACTTTTC CTGATGATGA CTTTCTGATT 15645 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| ACCTTGCTAA CTGGTGCAAT TGACGCTGTA TTCACTTTTC CTGATGATGA CCTTCTGATT 358 GGTTTAAAAT TACGCCATGG AGTGGGCATT GGCGCGTAAT CGAATCCCAT TTTTTTACTG 15705 ||||| |||| |||||||||| |||||||||| |||||||||| ||||||||| ||||||||| GGTTTGAAAT TACGCCATGG AGTGGGCATT GGCGCGTAAT CGAATCCCA- TTTTTTACTA 417 TCCAAACAGT CACGGACTTT CACACGGTAA GGGTTACGAT TTTCATCGTA GAAAAAGAAT 15765 |||||||| | |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| TCCAAACAAT CACGGACTTT CACGCGGTAA GGGTTACGAT TTTCATCGTA GAAAAAGAAT 477 TCAGAGTTCA ACCAATCTTT ATCTGTTAAA TCCCTTCTTT TCCCGCCAAT TAATTTCCAT 15825 |||||||||| |||||||||| || || |||| |||||||||| |||||||||| ||||||||| TCAGAGTTCA ACCAATCTTT ATTTGATAAA TCCCTTCTTT TCCCGCCAAT TAATTTCCAC 537 TCATTCCACA TCCTGTCCA 15844 || ||||||| ||||||||| TCGTTCCACA TCCTGTCCA 556 hqPGS_C08HBa0336I24.1+_SGN-E317358- (15288 15844) ******************************************************************************** EST sequence 149 -strand 433 n (File: SGN-E216715-) 1 GTAAAAGTAA CATCCTTAAC ATAATTATCA TTATTTCCAT GAACATGAGG CAAGCTAGTA 61 TAACTCCCCG CAAAACTCCG CCTTATCAAG TTCTTCTGCA TTCACAGTCT TGTCCACGTT 121 CAAAAACACA TCGAACCTTA CATACTTCGT ATCATCATAT GCCATTTTAT TGAATGTCAG 181 AATCTCCTCC TGCTCATTTT TCTCTTGTGT TGTCCTTGAC GAAGCTGGCC GCGTGATCGA 241 GAACGAAATC GCACGGTCCA GCTTGGCCAG TGGGAACACC TTGCTAACTG GTGCAATTGA 301 CGCTGTATTC ACTTTTCCTG ATGATGACCT TCTGATTGGT TTGAAATTAC GCCATGGAGT 361 GGGCATTGGC GCGTAATCGA ATCCCATTTT TTTACTATCC AAACAATCAC GGACTTTCAC 421 GCGGAAAGGA GCC Predicted gene structure (within gDNA segment 14268 to 16674): Exon 1 15313 15731 ( 419 n); cDNA 4 423 ( 420 n); score: 0.925 MATCH C08HBa0336I24.1+ SGN-E216715- 0.925 419 0.968 C PGS_C08HBa0336I24.1+_SGN-E216715- (15313 15731) Alignment (genomic DNA sequence = upper lines): AAAGTAACAC TGGTAACATG ATTAGTATTA CTTCCATGAA CATGCGGCAA GCTAGTATAA 15372 ||||||||| |||||| |||| |||| ||||||||| |||| ||||| |||||||||| AAAGTAACAT CCTTAACATA ATTATCATTA TTTCCATGAA CATGAGGCAA GCTAGTATAA 63 CTCCCTGC-A AACTCCGCCT TATCAAGCTC ATCTGCATTC ACAGTCTTGT CCACGTTCAG 15431 ||||| || | |||||||||| ||||||| || ||||||||| |||||||||| ||||||||| CTCCCCGCAA AACTCCGCCT TATCAAGTTC TTCTGCATTC ACAGTCTTGT CCACGTTCAA 123 AAACACATCG AACCTTACAT AGTTCCTATC ATCATACGAT ATTTTATTGA ATGTCAGTAT 15491 |||||||||| |||||||||| | ||| |||| |||||| | |||||||||| ||||||| || AAACACATCG AACCTTACAT ACTTCGTATC ATCATATGCC ATTTTATTGA ATGTCAGAAT 183 CTCCTCTTGC TCATTTTTCT CTTGTGTTGT CCTTGACGAG GCTGGCCGCG TGATAGAGAA 15551 |||||| ||| |||||||||| |||||||||| ||||||||| |||||||||| |||| ||||| CTCCTCCTGC TCATTTTTCT CTTGTGTTGT CCTTGACGAA GCTGGCCGCG TGATCGAGAA 243 CGAAATCGCA CGGTCCAGCT TCGCCAATGG GAACACCTTG CTAACTGGTG CAATTGACGC 15611 |||||||||| |||||||||| | |||| ||| |||||||||| |||||||||| |||||||||| CGAAATCGCA CGGTCCAGCT TGGCCAGTGG GAACACCTTG CTAACTGGTG CAATTGACGC 303 TGTATTCACT TTTCCTGATG ATGACTTTCT GATTGGTTTA AAATTACGCC ATGGAGTGGG 15671 |||||||||| |||||||||| ||||| |||| ||||||||| |||||||||| |||||||||| TGTATTCACT TTTCCTGATG ATGACCTTCT GATTGGTTTG AAATTACGCC ATGGAGTGGG 363 CATTGGCGCG TAATCGAATC CCATTTTTTT ACTGTCCAAA CAGTCACGGA CTTTCACACG 15731 |||||||||| |||||||||| |||||||||| ||| |||||| || ||||||| ||||||| || CATTGGCGCG TAATCGAATC CCATTTTTTT ACTATCCAAA CAATCACGGA CTTTCACGCG 423 hqPGS_C08HBa0336I24.1+_SGN-E216715- (15313 15731) ******************************************************************************** EST sequence 121 -strand 641 n (File: SGN-E242875-) 1 GACGAAGCTG GCCGCGTGAT CGAGAACGAA ATCGCACGGT CCAGCTTGGC CAGTGGGAAC 61 ACCTTGCTAA CTGGTGCAAT TGACGCTGTA TTCACTTTTC CTGATGATGA CCTTCTGATT 121 GGTTTGAAAT TACGCCATGG AGTGGGCATT GGCGCGTAAT CGAATCCCAT TTTTTTACTA 181 TCCAAACAAT CACGGACTTT CACGCGGTAA GGGTTACGAT TTTCATCGTA GAAAAAGAAT 241 TCAGAGTTCA ACCAATCTTT ATTTGATAAA TCCCTTCTTT TCCCGCCAAT TAATTTCCAC 301 TCGTTCCACA TCCTGTCCAC ATTAGCATGG TGACAGTAGA AAAGCGGGTC TAAACCAGCT 361 GAATAGAAAT TACCCATGTC TTCACCGTGT CCTTGTCTAG GACTATCACC GGTCCAGATA 421 TGGACCGGTG TATGAGGAAT ATTCTCAATA GTACCCATGC CTGGTTCTGG ATCAGAACCC 481 AGAGGGTAAG CAGCACCGAA GAATTGAGAC GGGCAAGGAG CATTAGTAAC CATTTGACGG 541 TACATTAGTG TTAAATTATT AGTCATTATC TGTAGCTGAG GTGTTTCGAC GTCCTTACCA 601 AAATGACCAA GATCAATAAT AGTTCCATTG CGATGATTTT G Predicted gene structure (within gDNA segment 14727 to 16766): Exon 1 15526 16166 ( 641 n); cDNA 1 641 ( 641 n); score: 0.925 MATCH C08HBa0336I24.1+ SGN-E242875- 0.925 641 1.000 C PGS_C08HBa0336I24.1+_SGN-E242875- (15526 16166) Alignment (genomic DNA sequence = upper lines): GACGAGGCTG GCCGCGTGAT AGAGAACGAA ATCGCACGGT CCAGCTTCGC CAATGGGAAC 15585 ||||| |||| |||||||||| ||||||||| |||||||||| ||||||| || || ||||||| GACGAAGCTG GCCGCGTGAT CGAGAACGAA ATCGCACGGT CCAGCTTGGC CAGTGGGAAC 60 ACCTTGCTAA CTGGTGCAAT TGACGCTGTA TTCACTTTTC CTGATGATGA CTTTCTGATT 15645 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| ACCTTGCTAA CTGGTGCAAT TGACGCTGTA TTCACTTTTC CTGATGATGA CCTTCTGATT 120 GGTTTAAAAT TACGCCATGG AGTGGGCATT GGCGCGTAAT CGAATCCCAT TTTTTTACTG 15705 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| GGTTTGAAAT TACGCCATGG AGTGGGCATT GGCGCGTAAT CGAATCCCAT TTTTTTACTA 180 TCCAAACAGT CACGGACTTT CACACGGTAA GGGTTACGAT TTTCATCGTA GAAAAAGAAT 15765 |||||||| | |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| TCCAAACAAT CACGGACTTT CACGCGGTAA GGGTTACGAT TTTCATCGTA GAAAAAGAAT 240 TCAGAGTTCA ACCAATCTTT ATCTGTTAAA TCCCTTCTTT TCCCGCCAAT TAATTTCCAT 15825 |||||||||| |||||||||| || || |||| |||||||||| |||||||||| ||||||||| TCAGAGTTCA ACCAATCTTT ATTTGATAAA TCCCTTCTTT TCCCGCCAAT TAATTTCCAC 300 TCATTCCACA TCCTGTCCAC ATTGGCATGG TGGCAGTAAA AAATCGGATC TAAACCGGCT 15885 || ||||||| |||||||||| ||| |||||| || ||||| | ||| ||| || |||||| ||| TCGTTCCACA TCCTGTCCAC ATTAGCATGG TGACAGTAGA AAAGCGGGTC TAAACCAGCT 360 GAGTAGAAAT TACCCATGTC TTCACCGTTT TTTTGACGAG GTTTGTCACC GGTCCAGATG 15945 || ||||||| |||||||||| |||||||| | ||| | || | | ||||| ||||||||| GAATAGAAAT TACCCATGTC TTCACCGTGT CCTTGTCTAG GACTATCACC GGTCCAGATA 420 TGAACCGGAG TATGAGGGAT GTTTTCAATA GTACCCTGAC CCGGACTTGG TTCAGAACCC 16005 || ||||| | ||||||| || || |||||| |||||| | | || ||| ||||||||| TGGACCGGTG TATGAGGAAT ATTCTCAATA GTACCCATGC CTGGTTCTGG ATCAGAACCC 480 AGAGGGTAAG CAGCACCGAA GAATTGGGAA GGGCAAGGAG CATTAGTAAC CATTTGACGG 16065 |||||||||| |||||||||| |||||| || |||||||||| |||||||||| |||||||||| AGAGGGTAAG CAGCACCGAA GAATTGAGAC GGGCAAGGAG CATTAGTAAC CATTTGACGG 540 TACATTAGGG TTAAATTATT AGTCATTATC TGTAGCTGAG GTGTGTCAAC TTCCTTACCA 16125 |||||||| | |||||||||| |||||||||| |||||||||| |||| || || ||||||||| TACATTAGTG TTAAATTATT AGTCATTATC TGTAGCTGAG GTGTTTCGAC GTCCTTACCA 600 AAATGACCAA GATCAATAAT AGTTCCATTG CGATGATTTT G 16166 |||||||||| |||||||||| |||||||||| |||||||||| | AAATGACCAA GATCAATAAT AGTTCCATTG CGATGATTTT G 641 hqPGS_C08HBa0336I24.1+_SGN-E242875- (15526 16166) ******************************************************************************** EST sequence 330 -strand 519 n (File: SGN-E323261-) 1 CGCGTGATCG AGAACGAAAT CGCACGGTCC AGCTTGGCCA GTGGGAACAC GTTGATACCT 61 GGTGCAATTG ACGCTGTATT CACTTTTCTT GATGATGACC TTCTGATTGG TTCGAAATTA 121 CGCCATGGAG TGGGCATTGG CGTGTAATCG AATCCCATTG TTTTACTATC CAAACAATCA 181 CGGACTTTCA CGCGGTAAGG GTTACGATTT TCATCGTAGA AAAAGAATTC AGAGTTCAGC 241 CAATCTTTAT CTGATAAATC CCTTCTTTTC CCGCCAATTA ATTTCCACTC GTTCCACATC 301 CTGTCCACAT TAGCATGGTG ACAGTAGAAA AGCGGGTATA AACCAGTTGA ATAGAAATTA 361 CCCATGTCTT CACCGTGTCC TTGTCTAGGA CTATCACCGG TCCAGATATG GACCGGTGTA 421 TGAGGAATAT TCTCAATAGT ACCCATGCCT GGTTCTGCAT CAGAACCCAG AGGGTAAGCA 481 AACTTGCTAT AGACAGAAGG ACGCCCGTCT CTTTGAAGA Predicted gene structure (within gDNA segment 14406 to 18744): Exon 1 15538 16017 ( 480 n); cDNA 1 480 ( 480 n); score: 0.894 MATCH C08HBa0336I24.1+ SGN-E323261- 0.894 480 0.925 C PGS_C08HBa0336I24.1+_SGN-E323261- (15538 16017) Alignment (genomic DNA sequence = upper lines): CGCGTGATAG AGAACGAAAT CGCACGGTCC AGCTTCGCCA ATGGGAACAC CTTGCTAACT 15597 |||||||| | |||||||||| |||||||||| ||||| |||| ||||||||| ||| || || CGCGTGATCG AGAACGAAAT CGCACGGTCC AGCTTGGCCA GTGGGAACAC GTTGATACCT 60 GGTGCAATTG ACGCTGTATT CACTTTTCCT GATGATGACT TTCTGATTGG TTTAAAATTA 15657 |||||||||| |||||||||| |||||||| | ||||||||| |||||||||| || |||||| GGTGCAATTG ACGCTGTATT CACTTTTCTT GATGATGACC TTCTGATTGG TTCGAAATTA 120 CGCCATGGAG TGGGCATTGG CGCGTAATCG AATCCCATTT TTTTACTGTC CAAACAGTCA 15717 |||||||||| |||||||||| || ||||||| ||||||||| ||||||| || |||||| ||| CGCCATGGAG TGGGCATTGG CGTGTAATCG AATCCCATTG TTTTACTATC CAAACAATCA 180 CGGACTTTCA CACGGTAAGG GTTACGATTT TCATCGTAGA AAAAGAATTC AGAGTTCAAC 15777 |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| |||||||| | CGGACTTTCA CGCGGTAAGG GTTACGATTT TCATCGTAGA AAAAGAATTC AGAGTTCAGC 240 CAATCTTTAT CTGTTAAATC CCTTCTTTTC CCGCCAATTA ATTTCCATTC ATTCCACATC 15837 |||||||||| ||| |||||| |||||||||| |||||||||| ||||||| || ||||||||| CAATCTTTAT CTGATAAATC CCTTCTTTTC CCGCCAATTA ATTTCCACTC GTTCCACATC 300 CTGTCCACAT TGGCATGGTG GCAGTAAAAA ATCGGATCTA AACCGGCTGA GTAGAAATTA 15897 |||||||||| | |||||||| ||||| ||| | ||| | || |||| | ||| ||||||||| CTGTCCACAT TAGCATGGTG ACAGTAGAAA AGCGGGTATA AACCAGTTGA ATAGAAATTA 360 CCCATGTCTT CACCGTTTTT TTGACGAGGT TTGTCACCGG TCCAGATGTG AACCGGAGTA 15957 |||||||||| |||||| | ||| | ||| | ||||||| ||||||| || ||||| ||| CCCATGTCTT CACCGTGTCC TTGTCTAGGA CTATCACCGG TCCAGATATG GACCGGTGTA 420 TGAGGGATGT TTTCAATAGT ACCCTGACCC GGACTTGGTT CAGAACCCAG AGGGTAAGCA 16017 ||||| || | | |||||||| |||| || || || | |||||||||| |||||||||| TGAGGAATAT TCTCAATAGT ACCCATGCCT GGTTCTGCAT CAGAACCCAG AGGGTAAGCA 480 hqPGS_C08HBa0336I24.1+_SGN-E323261- (15538 16017) ******************************************************************************** EST sequence 269 -strand 400 n (File: SGN-E319717-) 1 GAACGAAATC GCACGGTCCA GCTTCGCCAA TGGGAACACC ATGCTAACTG GTGCAATTGA 61 CGCTGTATTC ACTTTTCCTG ATGATGACTT TCTGATTGGT TTAAAATAAC GCCATGGAGT 121 GGGCAATGGC GCGTAATCGA ATCCCATTTT TTTACTGTCC AAACAGTCAC GGACTTTCAC 181 ACGGTAAGGG TTACGATTTT CATCGTAGAA AAAGAATTCA GAGTTCAACC AATCTTTATC 241 TGTTAAATCC CTTCTTTTCC CGCCAATTAA TTTCCATTCA TTCCACATCC TGTCCACATT 301 GGCATGGTGG CAGTAAAAAA TCGGATCTAA ACCGGCTGAG TAGAAATTAC CCATGTCTTC 361 CCCGTTTTTT TGACGAGGTT TGTCACCGGT CCAGATGTGA Predicted gene structure (within gDNA segment 14939 to 16548): Exon 1 15549 15948 ( 400 n); cDNA 1 400 ( 400 n); score: 0.990 MATCH C08HBa0336I24.1+ SGN-E319717- 0.990 400 1.000 C PGS_C08HBa0336I24.1+_SGN-E319717- (15549 15948) Alignment (genomic DNA sequence = upper lines): GAACGAAATC GCACGGTCCA GCTTCGCCAA TGGGAACACC TTGCTAACTG GTGCAATTGA 15608 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| GAACGAAATC GCACGGTCCA GCTTCGCCAA TGGGAACACC ATGCTAACTG GTGCAATTGA 60 CGCTGTATTC ACTTTTCCTG ATGATGACTT TCTGATTGGT TTAAAATTAC GCCATGGAGT 15668 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| CGCTGTATTC ACTTTTCCTG ATGATGACTT TCTGATTGGT TTAAAATAAC GCCATGGAGT 120 GGGCATTGGC GCGTAATCGA ATCCCATTTT TTTACTGTCC AAACAGTCAC GGACTTTCAC 15728 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGCAATGGC GCGTAATCGA ATCCCATTTT TTTACTGTCC AAACAGTCAC GGACTTTCAC 180 ACGGTAAGGG TTACGATTTT CATCGTAGAA AAAGAATTCA GAGTTCAACC AATCTTTATC 15788 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACGGTAAGGG TTACGATTTT CATCGTAGAA AAAGAATTCA GAGTTCAACC AATCTTTATC 240 TGTTAAATCC CTTCTTTTCC CGCCAATTAA TTTCCATTCA TTCCACATCC TGTCCACATT 15848 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTAAATCC CTTCTTTTCC CGCCAATTAA TTTCCATTCA TTCCACATCC TGTCCACATT 300 GGCATGGTGG CAGTAAAAAA TCGGATCTAA ACCGGCTGAG TAGAAATTAC CCATGTCTTC 15908 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCATGGTGG CAGTAAAAAA TCGGATCTAA ACCGGCTGAG TAGAAATTAC CCATGTCTTC 360 ACCGTTTTTT TGACGAGGTT TGTCACCGGT CCAGATGTGA 15948 ||||||||| |||||||||| |||||||||| |||||||||| CCCGTTTTTT TGACGAGGTT TGTCACCGGT CCAGATGTGA 400 hqPGS_C08HBa0336I24.1+_SGN-E319717- (15549 15948) ******************************************************************************** EST sequence 286 -strand 367 n (File: SGN-E290525-) 1 AATGGCAACA CCTTGCTAAC TGGTGCAATA GACGCTGTAT TCACTTTTCC TGATGATGAC 61 TTTCTGATTG GTTTAAAATT ACGCCATGGA GTGGGCATTG GCGCGTAATC GAATCCCATT 121 TTTTTACTGT CCAAACAGTC ACGGACTTTC ACACGGTAAG GGTTACGATT TTCATCGTAG 181 AAAAAGAATT CAGAGTTCAA CCAATCTTTA TCTGTTAAAT CCCTTCTTTT CCCGCCAATT 241 AATTTCCATT CATTCCACAT CCTGTCCACA TTGGCATGGT GGCAGTAAAA AATCGGATCT 301 AAACCGGCTG AGTAGAAATT ACCCATGTCT TCACCGTTTT TTTGACGAGG TTTGTCACCG 361 GTCCAGC Predicted gene structure (within gDNA segment 14913 to 16552): Exon 1 15577 15942 ( 366 n); cDNA 1 366 ( 366 n); score: 0.995 MATCH C08HBa0336I24.1+ SGN-E290525- 0.995 366 0.997 C PGS_C08HBa0336I24.1+_SGN-E290525- (15577 15942) Alignment (genomic DNA sequence = upper lines): AATGGGAACA CCTTGCTAAC TGGTGCAATT GACGCTGTAT TCACTTTTCC TGATGATGAC 15636 ||||| |||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| AATGGCAACA CCTTGCTAAC TGGTGCAATA GACGCTGTAT TCACTTTTCC TGATGATGAC 60 TTTCTGATTG GTTTAAAATT ACGCCATGGA GTGGGCATTG GCGCGTAATC GAATCCCATT 15696 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCTGATTG GTTTAAAATT ACGCCATGGA GTGGGCATTG GCGCGTAATC GAATCCCATT 120 TTTTTACTGT CCAAACAGTC ACGGACTTTC ACACGGTAAG GGTTACGATT TTCATCGTAG 15756 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTTACTGT CCAAACAGTC ACGGACTTTC ACACGGTAAG GGTTACGATT TTCATCGTAG 180 AAAAAGAATT CAGAGTTCAA CCAATCTTTA TCTGTTAAAT CCCTTCTTTT CCCGCCAATT 15816 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAAGAATT CAGAGTTCAA CCAATCTTTA TCTGTTAAAT CCCTTCTTTT CCCGCCAATT 240 AATTTCCATT CATTCCACAT CCTGTCCACA TTGGCATGGT GGCAGTAAAA AATCGGATCT 15876 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTTCCATT CATTCCACAT CCTGTCCACA TTGGCATGGT GGCAGTAAAA AATCGGATCT 300 AAACCGGCTG AGTAGAAATT ACCCATGTCT TCACCGTTTT TTTGACGAGG TTTGTCACCG 15936 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACCGGCTG AGTAGAAATT ACCCATGTCT TCACCGTTTT TTTGACGAGG TTTGTCACCG 360 GTCCAG 15942 |||||| GTCCAG 366 hqPGS_C08HBa0336I24.1+_SGN-E290525- (15577 15942) ******************************************************************************** EST sequence 356 -strand 578 n (File: SGN-E241903-) 1 TTGCTAACTG GTGCAATTGA CGCTGTATTC ACTTTTCCTG ATGATGACCT TCTGATTGGT 61 TTGAAATTAC GCCATGGAGT GGGCATTGGC GCGTAATCGA ATCCCATTTT TTTACTATCC 121 AAACAATCAC GGACTTTCAC GCGGTAAGGG TTACGATTTT CATCGTAGAA AAAGAATTCA 181 GAGTTCAACC AATCTTTATT TGATAAATCC CTTCTTTTCC CGCCAATTAA TTTCCACTCG 241 TTCCACATCC TGTCCACATT AGCATGGTGA CAGTAGAAAA GCGGGTCTAA ACCAGCTGAA 301 TAGAAATTAC CCATGTCTTC ACCGTGTCCT TGTCTAGGAC TATCACCGGT CCAGATATGG 361 ACCGGTGTAT GAGGAATATT CTCAATAGTA CCCATGCCTG GTTCTGGATC AGAACCCAGA 421 GGGTAAGCAG CACCGAAGAA TTGAGACGGG CAAGGAGCAT TAGTAACCAT TTGACGGTAC 481 ATTAGTGTTA AATTATTAGT CATTATCTGT AGCTGAGGTG TTTCGACGTC CTTACCAAAA 541 TGACCAAGAT CAATAATAGT TCCATTGCGA TGATTTTG Predicted gene structure (within gDNA segment 14979 to 16766): Exon 1 15589 16166 ( 578 n); cDNA 1 578 ( 578 n); score: 0.924 MATCH C08HBa0336I24.1+ SGN-E241903- 0.924 578 1.000 C PGS_C08HBa0336I24.1+_SGN-E241903- (15589 16166) Alignment (genomic DNA sequence = upper lines): TTGCTAACTG GTGCAATTGA CGCTGTATTC ACTTTTCCTG ATGATGACTT TCTGATTGGT 15648 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| TTGCTAACTG GTGCAATTGA CGCTGTATTC ACTTTTCCTG ATGATGACCT TCTGATTGGT 60 TTAAAATTAC GCCATGGAGT GGGCATTGGC GCGTAATCGA ATCCCATTTT TTTACTGTCC 15708 || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| TTGAAATTAC GCCATGGAGT GGGCATTGGC GCGTAATCGA ATCCCATTTT TTTACTATCC 120 AAACAGTCAC GGACTTTCAC ACGGTAAGGG TTACGATTTT CATCGTAGAA AAAGAATTCA 15768 ||||| |||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| AAACAATCAC GGACTTTCAC GCGGTAAGGG TTACGATTTT CATCGTAGAA AAAGAATTCA 180 GAGTTCAACC AATCTTTATC TGTTAAATCC CTTCTTTTCC CGCCAATTAA TTTCCATTCA 15828 |||||||||| ||||||||| || ||||||| |||||||||| |||||||||| |||||| || GAGTTCAACC AATCTTTATT TGATAAATCC CTTCTTTTCC CGCCAATTAA TTTCCACTCG 240 TTCCACATCC TGTCCACATT GGCATGGTGG CAGTAAAAAA TCGGATCTAA ACCGGCTGAG 15888 |||||||||| |||||||||| |||||||| ||||| |||| ||| ||||| ||| ||||| TTCCACATCC TGTCCACATT AGCATGGTGA CAGTAGAAAA GCGGGTCTAA ACCAGCTGAA 300 TAGAAATTAC CCATGTCTTC ACCGTTTTTT TGACGAGGTT TGTCACCGGT CCAGATGTGA 15948 |||||||||| |||||||||| ||||| | | || | ||| | |||||||| |||||| || TAGAAATTAC CCATGTCTTC ACCGTGTCCT TGTCTAGGAC TATCACCGGT CCAGATATGG 360 ACCGGAGTAT GAGGGATGTT TTCAATAGTA CCCTGACCCG GACTTGGTTC AGAACCCAGA 16008 ||||| |||| |||| || || ||||||||| ||| || | | ||| || |||||||||| ACCGGTGTAT GAGGAATATT CTCAATAGTA CCCATGCCTG GTTCTGGATC AGAACCCAGA 420 GGGTAAGCAG CACCGAAGAA TTGGGAAGGG CAAGGAGCAT TAGTAACCAT TTGACGGTAC 16068 |||||||||| |||||||||| ||| || ||| |||||||||| |||||||||| |||||||||| GGGTAAGCAG CACCGAAGAA TTGAGACGGG CAAGGAGCAT TAGTAACCAT TTGACGGTAC 480 ATTAGGGTTA AATTATTAGT CATTATCTGT AGCTGAGGTG TGTCAACTTC CTTACCAAAA 16128 ||||| |||| |||||||||| |||||||||| |||||||||| | || || || |||||||||| ATTAGTGTTA AATTATTAGT CATTATCTGT AGCTGAGGTG TTTCGACGTC CTTACCAAAA 540 TGACCAAGAT CAATAATAGT TCCATTGCGA TGATTTTG 16166 |||||||||| |||||||||| |||||||||| |||||||| TGACCAAGAT CAATAATAGT TCCATTGCGA TGATTTTG 578 hqPGS_C08HBa0336I24.1+_SGN-E241903- (15589 16166) ******************************************************************************** EST sequence 307 -strand 640 n (File: SGN-E322245-) 1 TGCAATTGAC GCTGTATTCA CTTTTCCTGA TGATGACCTT CTGATTGGTT TGAAATTACG 61 CCATGGAGTG GGCATTGGCG CGTAATCGAA TCCCATTTTT TTACTATCCA AACAATCACG 121 GACTTTCACG CGGTAAGGGT TACGATTTTC ATCGTAGAAA AAGAATTCAG AGTTCAACCA 181 ATCTTTATTT GATAAATCCC TTCTTTTCCC GCCAATTAAT TTCCACTCGT TCCACATCCT 241 GTCCACATTA GCATGGTGAC AGTAGAAAAG CGGGTCTAAA CCAGCTGAAT AGAAATTACC 301 CATGTCTTCA CCGTGTCCTT GTCTAGGACT ATCACCGGTC CAGATATGGA CCGGTGTATG 361 AGGAATATTC TCAATAGTAC CCATGCCTGG TTCTGGATCA GAACCCAGAG GGTAAGCAGC 421 ACCGAAGAAT TGAGACGGGC AAGGAGCATT AGTAACCATT TGACGGTACA TTAGTGTTAA 481 ATTATTAGTC ATTATCTGTA GCTGAGGTGT TTCGACGTCC TTACCAAAAT GACCAAGATC 541 AATAATAGTT CCATTGCGAT GATTTTGGTT ACGTTTCTCA TCGTAAAGAG ATGAACCCTC 601 ACGATCAAAC ATGGGAGGTA TACGCATACC TTTTGGATGA Predicted gene structure (within gDNA segment 14990 to 16956): Exon 1 15600 16239 ( 640 n); cDNA 1 640 ( 640 n); score: 0.928 MATCH C08HBa0336I24.1+ SGN-E322245- 0.928 640 1.000 C PGS_C08HBa0336I24.1+_SGN-E322245- (15600 16239) Alignment (genomic DNA sequence = upper lines): TGCAATTGAC GCTGTATTCA CTTTTCCTGA TGATGACTTT CTGATTGGTT TAAAATTACG 15659 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| | |||||||| TGCAATTGAC GCTGTATTCA CTTTTCCTGA TGATGACCTT CTGATTGGTT TGAAATTACG 60 CCATGGAGTG GGCATTGGCG CGTAATCGAA TCCCATTTTT TTACTGTCCA AACAGTCACG 15719 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| |||| ||||| CCATGGAGTG GGCATTGGCG CGTAATCGAA TCCCATTTTT TTACTATCCA AACAATCACG 120 GACTTTCACA CGGTAAGGGT TACGATTTTC ATCGTAGAAA AAGAATTCAG AGTTCAACCA 15779 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACTTTCACG CGGTAAGGGT TACGATTTTC ATCGTAGAAA AAGAATTCAG AGTTCAACCA 180 ATCTTTATCT GTTAAATCCC TTCTTTTCCC GCCAATTAAT TTCCATTCAT TCCACATCCT 15839 |||||||| | | |||||||| |||||||||| |||||||||| ||||| || | |||||||||| ATCTTTATTT GATAAATCCC TTCTTTTCCC GCCAATTAAT TTCCACTCGT TCCACATCCT 240 GTCCACATTG GCATGGTGGC AGTAAAAAAT CGGATCTAAA CCGGCTGAGT AGAAATTACC 15899 ||||||||| |||||||| | |||| |||| ||| |||||| || ||||| | |||||||||| GTCCACATTA GCATGGTGAC AGTAGAAAAG CGGGTCTAAA CCAGCTGAAT AGAAATTACC 300 CATGTCTTCA CCGTTTTTTT GACGAGGTTT GTCACCGGTC CAGATGTGAA CCGGAGTATG 15959 |||||||||| |||| | || | | ||| | ||||||||| ||||| || | |||| ||||| CATGTCTTCA CCGTGTCCTT GTCTAGGACT ATCACCGGTC CAGATATGGA CCGGTGTATG 360 AGGGATGTTT TCAATAGTAC CCTGACCCGG ACTTGGTTCA GAACCCAGAG GGTAAGCAGC 16019 ||| || || |||||||||| || || || ||| ||| |||||||||| |||||||||| AGGAATATTC TCAATAGTAC CCATGCCTGG TTCTGGATCA GAACCCAGAG GGTAAGCAGC 420 ACCGAAGAAT TGGGAAGGGC AAGGAGCATT AGTAACCATT TGACGGTACA TTAGGGTTAA 16079 |||||||||| || || |||| |||||||||| |||||||||| |||||||||| |||| ||||| ACCGAAGAAT TGAGACGGGC AAGGAGCATT AGTAACCATT TGACGGTACA TTAGTGTTAA 480 ATTATTAGTC ATTATCTGTA GCTGAGGTGT GTCAACTTCC TTACCAAAAT GACCAAGATC 16139 |||||||||| |||||||||| |||||||||| || || ||| |||||||||| |||||||||| ATTATTAGTC ATTATCTGTA GCTGAGGTGT TTCGACGTCC TTACCAAAAT GACCAAGATC 540 AATAATAGTT CCATTGCGAT GATTTTGGTT ACGTTTCTCA TCGTAAAGAG ATGATCCCTC 16199 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| AATAATAGTT CCATTGCGAT GATTTTGGTT ACGTTTCTCA TCGTAAAGAG ATGAACCCTC 600 ACGATCAAAC ATGGGAGGTA TACGCATGCC TTTTGGATGA 16239 |||||||||| |||||||||| ||||||| || |||||||||| ACGATCAAAC ATGGGAGGTA TACGCATACC TTTTGGATGA 640 hqPGS_C08HBa0336I24.1+_SGN-E322245- (15600 16239) ******************************************************************************** EST sequence 288 -strand 314 n (File: SGN-E290521-) 1 GATGATGACT TTCTGATTGG TTTAAAATTA CGCCATGGAG TGGGCATTGG CGCGTAATCG 61 AATCCCATTT TTTTACTGTC CAAACAGTCA CGGACTTTCA CACGGTAAGG GTTACGATTT 121 TCATCGTAGA AAAAGAATTC AGAGTTCAAC CAATCTTTAT CTGTTAAATC CCTTCTTTTC 181 CCGCCAATTA ATTTCCATTC ATTCCACATC CTGTCCACAT TGGCATGGTG GCAGTAAAAA 241 ATCGGATCTA AACCGGCTGA GTAGAAATTA CCCATGTCTT CACCGTTTTT TTGACGAGGT 301 TTGTCACCGG TCCA Predicted gene structure (within gDNA segment 15018 to 16541): Exon 1 15628 15941 ( 314 n); cDNA 1 314 ( 314 n); score: 1.000 MATCH C08HBa0336I24.1+ SGN-E290521- 1.000 314 1.000 C PGS_C08HBa0336I24.1+_SGN-E290521- (15628 15941) Alignment (genomic DNA sequence = upper lines): GATGATGACT TTCTGATTGG TTTAAAATTA CGCCATGGAG TGGGCATTGG CGCGTAATCG 15687 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGATGACT TTCTGATTGG TTTAAAATTA CGCCATGGAG TGGGCATTGG CGCGTAATCG 60 AATCCCATTT TTTTACTGTC CAAACAGTCA CGGACTTTCA CACGGTAAGG GTTACGATTT 15747 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATCCCATTT TTTTACTGTC CAAACAGTCA CGGACTTTCA CACGGTAAGG GTTACGATTT 120 TCATCGTAGA AAAAGAATTC AGAGTTCAAC CAATCTTTAT CTGTTAAATC CCTTCTTTTC 15807 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCATCGTAGA AAAAGAATTC AGAGTTCAAC CAATCTTTAT CTGTTAAATC CCTTCTTTTC 180 CCGCCAATTA ATTTCCATTC ATTCCACATC CTGTCCACAT TGGCATGGTG GCAGTAAAAA 15867 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGCCAATTA ATTTCCATTC ATTCCACATC CTGTCCACAT TGGCATGGTG GCAGTAAAAA 240 ATCGGATCTA AACCGGCTGA GTAGAAATTA CCCATGTCTT CACCGTTTTT TTGACGAGGT 15927 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCGGATCTA AACCGGCTGA GTAGAAATTA CCCATGTCTT CACCGTTTTT TTGACGAGGT 300 TTGTCACCGG TCCA 15941 |||||||||| |||| TTGTCACCGG TCCA 314 hqPGS_C08HBa0336I24.1+_SGN-E290521- (15628 15941) ******************************************************************************** EST sequence 112 -strand 718 n (File: SGN-E326236-) 1 GATTGGTTTG AAATTACGCC ATGGAGTGGG CATTGGCGCG TAATCGAATC CCATTTTTTT 61 ACTATCCAAA CAATCACGGA CTTCACGCGG GTAAGGGTTA CGATTTTCAT CGTAGAAAAA 121 GAATTCAGAG TTCAACCAAT CTTTATTTGA TAAATCCCTT CTTTTCCCGC CAATTAATTT 181 CCACTCGTTC CACATCCTGT CCACATTAGC ATGGTGACAG TAGAAAAGCG GGTCTAAACC 241 AGCTGAATAG AAATTACCCA TGTCTTCACC GTGTCCTTGT CTAGGACTAT CACCGGTCCA 301 GATATGGACC GGTGTATGAG GAATATTCTC AATAGTACCC ATGCCTGGTT CTGGATCAGA 361 ACCCAGAGGG TAAGCAGCAC CGAAGAATTG AGACGGGCAA GGAGCATTAG TAACCATTTG 421 ACGGTACATT AGTGTTAAAT TATTAGTCAT TATCTGTAGC TGAGGTGTTT CGACGTCCTT 481 ACCAAAATGA CCAAGATCAA TAATAGTTCC ATTGCGATGA TTTTGGTTAC GTTTCTCATC 541 GTAAAGAGAT GAACCCTCAC GATCAAACAT GGGAGGTATA CGCATACCTT TTGGATGATC 601 CCAATTCCAG TAAGGTAAAG CAAAAGTTGG ATCATTAATA AGTGACCCCA ATATCCTTTC 661 GTAAAAGTAC AAGTACCATC TATGGAACGG AAAGAAAAGC CACGAGAAAT GAACTTGC Predicted gene structure (within gDNA segment 14942 to 16959): Exon 1 15642 16359 ( 718 n); cDNA 1 718 ( 718 n); score: 0.925 MATCH C08HBa0336I24.1+ SGN-E326236- 0.925 718 1.000 C PGS_C08HBa0336I24.1+_SGN-E326236- (15642 16359) Alignment (genomic DNA sequence = upper lines): GATTGGTTTA AAATTACGCC ATGGAGTGGG CATTGGCGCG TAATCGAATC CCATTTTTTT 15701 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATTGGTTTG AAATTACGCC ATGGAGTGGG CATTGGCGCG TAATCGAATC CCATTTTTTT 60 ACTGTCCAAA CAGTCACGGA CTTTCACAC- GGTAAGGGTT ACGATTTTCA TCGTAGAAAA 15760 ||| |||||| || ||||||| | ||||| | |||||||||| |||||||||| |||||||||| ACTATCCAAA CAATCACGGA C-TTCACGCG GGTAAGGGTT ACGATTTTCA TCGTAGAAAA 119 AGAATTCAGA GTTCAACCAA TCTTTATCTG TTAAATCCCT TCTTTTCCCG CCAATTAATT 15820 |||||||||| |||||||||| ||||||| || ||||||||| |||||||||| |||||||||| AGAATTCAGA GTTCAACCAA TCTTTATTTG ATAAATCCCT TCTTTTCCCG CCAATTAATT 179 TCCATTCATT CCACATCCTG TCCACATTGG CATGGTGGCA GTAAAAAATC GGATCTAAAC 15880 |||| || || |||||||||| |||||||| | ||||||| || ||| |||| | || ||||||| TCCACTCGTT CCACATCCTG TCCACATTAG CATGGTGACA GTAGAAAAGC GGGTCTAAAC 239 CGGCTGAGTA GAAATTACCC ATGTCTTCAC CGTTTTTTTG ACGAGGTTTG TCACCGGTCC 15940 | ||||| || |||||||||| |||||||||| ||| | ||| | ||| | |||||||||| CAGCTGAATA GAAATTACCC ATGTCTTCAC CGTGTCCTTG TCTAGGACTA TCACCGGTCC 299 AGATGTGAAC CGGAGTATGA GGGATGTTTT CAATAGTACC CTGACCCGGA CTTGGTTCAG 16000 |||| || || ||| |||||| || || || | |||||||||| | || || ||| |||| AGATATGGAC CGGTGTATGA GGAATATTCT CAATAGTACC CATGCCTGGT TCTGGATCAG 359 AACCCAGAGG GTAAGCAGCA CCGAAGAATT GGGAAGGGCA AGGAGCATTA GTAACCATTT 16060 |||||||||| |||||||||| |||||||||| | || ||||| |||||||||| |||||||||| AACCCAGAGG GTAAGCAGCA CCGAAGAATT GAGACGGGCA AGGAGCATTA GTAACCATTT 419 GACGGTACAT TAGGGTTAAA TTATTAGTCA TTATCTGTAG CTGAGGTGTG TCAACTTCCT 16120 |||||||||| ||| |||||| |||||||||| |||||||||| ||||||||| || || |||| GACGGTACAT TAGTGTTAAA TTATTAGTCA TTATCTGTAG CTGAGGTGTT TCGACGTCCT 479 TACCAAAATG ACCAAGATCA ATAATAGTTC CATTGCGATG ATTTTGGTTA CGTTTCTCAT 16180 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACCAAAATG ACCAAGATCA ATAATAGTTC CATTGCGATG ATTTTGGTTA CGTTTCTCAT 539 CGTAAAGAGA TGATCCCTCA CGATCAAACA TGGGAGGTAT ACGCATGCCT TTTGGATGAT 16240 |||||||||| ||| |||||| |||||||||| |||||||||| |||||| ||| |||||||||| CGTAAAGAGA TGAACCCTCA CGATCAAACA TGGGAGGTAT ACGCATACCT TTTGGATGAT 599 CCCAATTCCA GTAAGGTAAA GCAAAAGTTG GATCATTAAT AAGTGATCCC AAAATTCTTT 16300 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| || || |||| CCCAATTCCA GTAAGGTAAA GCAAAAGTTG GATCATTAAT AAGTGACCCC AATATCCTTT 659 CGTAAAAGTA CAAGTACCAT CTATGAAAGG GAAAGAAAAG CCACGAGAAA TGAACTTGC 16359 |||||||||| |||||||||| ||||| || | |||||||||| |||||||||| ||||||||| CGTAAAAGTA CAAGTACCAT CTATGGAACG GAAAGAAAAG CCACGAGAAA TGAACTTGC 718 hqPGS_C08HBa0336I24.1+_SGN-E326236- (15642 16359) ******************************************************************************** EST sequence 321 -strand 749 n (File: SGN-E334025-) 1 GGCATTGGCG CGTAATCGAA TCCCATTTTT TACTATCCAA ACAATCACGG ACTTTCACGC 61 GGTAAGGGTT ACGATTTTCA TCGTAGAAAA AGAATTCAGA GTTCAACCAA TCTTTATTTG 121 ATAAATCCCT TCTTTTCCCG CCAATTAATT TCCACTCGTT CCACATCCTG TCCACATTAG 181 CATGGTGACA GTAGAAAAGC GGGTCTAAAC CAGCTGAATA GAAATTACCC ATGTCTTCAC 241 CGTGTCCTTG TCTAGGACTA TCACCGGTCC AGATATGGAC CGGTGTATGA GGAATATTCT 301 CAATAGTACC CATGCCTGGT TCTGGATCAG AACCCAGAGG GTAAGCAGCA CCGAAGAATT 361 GAGACGGGCA AGGAGCATTA GTAACCATTT GACGGTACAT TAGTGTTAAA TTATTAGTCA 421 TTATCTGTAG CTGAGGTGTT TCGACGTCCT TACCAAAATG ACCAAGATCA ATAATAGTTC 481 CATTGCGATG ATTTTGGTTA CGTTTCTCAT CGTAAAGAGA TGAACCCTCA CGATCAAACA 541 TGGGAGGTAT ACGCATACCT TTTGGATGAT CCCAATTCCA GTAAGGTAAA GCAAAAGTTG 601 GATCATTAAT AAGTGACCCC AATATCCTTT CGTAAAAGTA CAAGTACCAT CTATGGAACG 661 GAAAGAAAAG CCACGAGAAA TGAACTTGCA ATTCTTTACC ACCAATTTTA TAAGCACCGT 721 TACAATAAGC ACAATGAATA TTAGCTTGT Predicted gene structure (within gDNA segment 15060 to 17019): Exon 1 15670 16419 ( 750 n); cDNA 1 749 ( 749 n); score: 0.929 MATCH C08HBa0336I24.1+ SGN-E334025- 0.929 750 1.001 C PGS_C08HBa0336I24.1+_SGN-E334025- (15670 16419) Alignment (genomic DNA sequence = upper lines): GGCATTGGCG CGTAATCGAA TCCCATTTTT TTACTGTCCA AACAGTCACG GACTTTCACA 15729 |||||||||| |||||||||| ||||| |||| ||||| |||| |||| ||||| ||||||||| GGCATTGGCG CGTAATCGAA TCCCA-TTTT TTACTATCCA AACAATCACG GACTTTCACG 59 CGGTAAGGGT TACGATTTTC ATCGTAGAAA AAGAATTCAG AGTTCAACCA ATCTTTATCT 15789 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | CGGTAAGGGT TACGATTTTC ATCGTAGAAA AAGAATTCAG AGTTCAACCA ATCTTTATTT 119 GTTAAATCCC TTCTTTTCCC GCCAATTAAT TTCCATTCAT TCCACATCCT GTCCACATTG 15849 | |||||||| |||||||||| |||||||||| ||||| || | |||||||||| ||||||||| GATAAATCCC TTCTTTTCCC GCCAATTAAT TTCCACTCGT TCCACATCCT GTCCACATTA 179 GCATGGTGGC AGTAAAAAAT CGGATCTAAA CCGGCTGAGT AGAAATTACC CATGTCTTCA 15909 |||||||| | |||| |||| ||| |||||| || ||||| | |||||||||| |||||||||| GCATGGTGAC AGTAGAAAAG CGGGTCTAAA CCAGCTGAAT AGAAATTACC CATGTCTTCA 239 CCGTTTTTTT GACGAGGTTT GTCACCGGTC CAGATGTGAA CCGGAGTATG AGGGATGTTT 15969 |||| | || | | ||| | ||||||||| ||||| || | |||| ||||| ||| || || CCGTGTCCTT GTCTAGGACT ATCACCGGTC CAGATATGGA CCGGTGTATG AGGAATATTC 299 TCAATAGTAC CCTGACCCGG ACTTGGTTCA GAACCCAGAG GGTAAGCAGC ACCGAAGAAT 16029 |||||||||| || || || ||| ||| |||||||||| |||||||||| |||||||||| TCAATAGTAC CCATGCCTGG TTCTGGATCA GAACCCAGAG GGTAAGCAGC ACCGAAGAAT 359 TGGGAAGGGC AAGGAGCATT AGTAACCATT TGACGGTACA TTAGGGTTAA ATTATTAGTC 16089 || || |||| |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| TGAGACGGGC AAGGAGCATT AGTAACCATT TGACGGTACA TTAGTGTTAA ATTATTAGTC 419 ATTATCTGTA GCTGAGGTGT GTCAACTTCC TTACCAAAAT GACCAAGATC AATAATAGTT 16149 |||||||||| |||||||||| || || ||| |||||||||| |||||||||| |||||||||| ATTATCTGTA GCTGAGGTGT TTCGACGTCC TTACCAAAAT GACCAAGATC AATAATAGTT 479 CCATTGCGAT GATTTTGGTT ACGTTTCTCA TCGTAAAGAG ATGATCCCTC ACGATCAAAC 16209 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| CCATTGCGAT GATTTTGGTT ACGTTTCTCA TCGTAAAGAG ATGAACCCTC ACGATCAAAC 539 ATGGGAGGTA TACGCATGCC TTTTGGATGA TCCCAATTCC AGTAAGGTAA AGCAAAAGTT 16269 |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| ATGGGAGGTA TACGCATACC TTTTGGATGA TCCCAATTCC AGTAAGGTAA AGCAAAAGTT 599 GGATCATTAA TAAGTGATCC CAAAATTCTT TCGTAAAAGT ACAAGTACCA TCTATGAAAG 16329 |||||||||| ||||||| || ||| || ||| |||||||||| |||||||||| |||||| || GGATCATTAA TAAGTGACCC CAATATCCTT TCGTAAAAGT ACAAGTACCA TCTATGGAAC 659 GGAAAGAAAA GCCACGAGAA ATGAACTTGC AATTCTTTAC CACCAACTTT GTAAGCACCG 16389 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| ||||||||| GGAAAGAAAA GCCACGAGAA ATGAACTTGC AATTCTTTAC CACCAATTTT ATAAGCACCG 719 TTGCAATAAG CACAATGAAT ATTAGCTTGT 16419 || ||||||| |||||||||| |||||||||| TTACAATAAG CACAATGAAT ATTAGCTTGT 749 hqPGS_C08HBa0336I24.1+_SGN-E334025- (15670 16419) ******************************************************************************** EST sequence 130 -strand 482 n (File: SGN-E243580-) 1 CAAATCCCAT TTTTTTTACT ATCCAAACAA TCGCGGACTT TCACGCGGTA AGGGTTACGA 61 TTTTCATCGT AGAAAAAGAA TTCAGAGTTC AACCAATCTT TATTTGATNA ATGCCTTCTT 121 TTCCCGCCAA TTAATTTCCA CTCGTTCCAC ATCCTGTCCA CATTAGCATG GTGACAGTAG 181 AAAAGCGGGT CTAAACCAGC TGAATAGAAA TTACCCATGT CTTCACCGTG TCCTTGTCTA 241 GGACTATCAC CGGTCCAGAT ATGGACCGGT GTATGAGGAA TATTCTCAAT AGTACCCATG 301 CCTGGTTCTG GATCAGAACC CAGAGGGTAA GCAGCACCGA AGAATTGAGA CGGGCAAGGA 361 GCATTAGTAA CCATTTGACG GTACATTAGT GTTAAATTAT TAGTCATTAT CTGTAGCTGA 421 GGTGTTTCGA CGTCCTTACC AAAATGACCA AGATCAATAA TAGTTCCATT GCGATGATTT 481 TG Predicted gene structure (within gDNA segment 14670 to 16766): Exon 1 15688 16166 ( 479 n); cDNA 3 482 ( 480 n); score: 0.901 MATCH C08HBa0336I24.1+ SGN-E243580- 0.901 479 0.994 C PGS_C08HBa0336I24.1+_SGN-E243580- (15688 16166) Alignment (genomic DNA sequence = upper lines): AATCCCATTT -TTTTACTGT CCAAACAGTC ACGGACTTTC ACACGGTAAG GGTTACGATT 15746 |||||||||| ||||||| | ||||||| || ||||||||| || ||||||| |||||||||| AATCCCATTT TTTTTACTAT CCAAACAATC GCGGACTTTC ACGCGGTAAG GGTTACGATT 62 TTCATCGTAG AAAAAGAATT CAGAGTTCAA CCAATCTTTA TCTGTTAAAT CCCTTCTTTT 15806 |||||||||| |||||||||| |||||||||| |||||||||| | || | ||| ||||||||| TTCATCGTAG AAAAAGAATT CAGAGTTCAA CCAATCTTTA TTTGATNAAT GCCTTCTTTT 122 CCCGCCAATT AATTTCCATT CATTCCACAT CCTGTCCACA TTGGCATGGT GGCAGTAAAA 15866 |||||||||| |||||||| | | |||||||| |||||||||| || ||||||| | ||||| || CCCGCCAATT AATTTCCACT CGTTCCACAT CCTGTCCACA TTAGCATGGT GACAGTAGAA 182 AATCGGATCT AAACCGGCTG AGTAGAAATT ACCCATGTCT TCACCGTTTT TTTGACGAGG 15926 || ||| ||| ||||| |||| | |||||||| |||||||||| ||||||| | ||| | ||| AAGCGGGTCT AAACCAGCTG AATAGAAATT ACCCATGTCT TCACCGTGTC CTTGTCTAGG 242 TTTGTCACCG GTCCAGATGT GAACCGGAGT ATGAGGGATG TTTTCAATAG TACCCTGACC 15986 | |||||| |||||||| | | ||||| || |||||| || || ||||||| ||||| || ACTATCACCG GTCCAGATAT GGACCGGTGT ATGAGGAATA TTCTCAATAG TACCCATGCC 302 CGGACTTGGT TCAGAACCCA GAGGGTAAGC AGCACCGAAG AATTGGGAAG GGCAAGGAGC 16046 || ||| |||||||||| |||||||||| |||||||||| ||||| || | |||||||||| TGGTTCTGGA TCAGAACCCA GAGGGTAAGC AGCACCGAAG AATTGAGACG GGCAAGGAGC 362 ATTAGTAACC ATTTGACGGT ACATTAGGGT TAAATTATTA GTCATTATCT GTAGCTGAGG 16106 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| ATTAGTAACC ATTTGACGGT ACATTAGTGT TAAATTATTA GTCATTATCT GTAGCTGAGG 422 TGTGTCAACT TCCTTACCAA AATGACCAAG ATCAATAATA GTTCCATTGC GATGATTTTG 16166 ||| || || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTTCGACG TCCTTACCAA AATGACCAAG ATCAATAATA GTTCCATTGC GATGATTTTG 482 hqPGS_C08HBa0336I24.1+_SGN-E243580- (15688 16166) ******************************************************************************** EST sequence 337 -strand 573 n (File: SGN-E313577-) 1 AGGGTTACGA TTTTCATCGT AGAAAAAGAA TTCAGAGTTC AACCAATCTT TATTTGATAA 61 ATCCCTTCTT TTCCCGCCAA TTAATTTCCA CTCGTTCCAC ATCCTGTCCA CATTAGCATG 121 GTGACAGTAG AAAAGCGGGT CTAAACCAGC TGAATAGAAA TTACCCATGT CTTCACCGTG 181 TCCTTGTCTA GGACTATCAC CGGTCCAGAT ATGGACCGGT GTATGAGGAA TATTCTCAAT 241 AGTACCCATG CCTGGTTCTG GATCAGAACC CAGAGGGTAA GCAGCACCGA AGAATTGAGA 301 CGGGCAAGGA GCATTAGTAA CCATTTGACG GTACATTAGT GTTAAATTAT TAGTCATTAT 361 CTGTAGCTGA GGTGTTTCGA CGTCCTTACC AAAATGACCA AGATCAATAA TAGTTCCATT 421 GCGATGATTT TGGTTACGTT TCTCATCGTA AAGAGATGAA CCCTCACGAT CAAACATGGG 481 AGGTATACGC ATACCTTTTG GATGATCCCA ATTCCAGTAA GGTAAAGCAA AAGTTGGATC 541 ATTAATAAGT GACCCCAATA TCCTTTCGTA AAA Predicted gene structure (within gDNA segment 15125 to 17096): Exon 1 15735 16307 ( 573 n); cDNA 1 573 ( 573 n); score: 0.923 MATCH C08HBa0336I24.1+ SGN-E313577- 0.923 573 1.000 C PGS_C08HBa0336I24.1+_SGN-E313577- (15735 16307) Alignment (genomic DNA sequence = upper lines): AGGGTTACGA TTTTCATCGT AGAAAAAGAA TTCAGAGTTC AACCAATCTT TATCTGTTAA 15794 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| || ||| AGGGTTACGA TTTTCATCGT AGAAAAAGAA TTCAGAGTTC AACCAATCTT TATTTGATAA 60 ATCCCTTCTT TTCCCGCCAA TTAATTTCCA TTCATTCCAC ATCCTGTCCA CATTGGCATG 15854 |||||||||| |||||||||| |||||||||| || |||||| |||||||||| |||| ||||| ATCCCTTCTT TTCCCGCCAA TTAATTTCCA CTCGTTCCAC ATCCTGTCCA CATTAGCATG 120 GTGGCAGTAA AAAATCGGAT CTAAACCGGC TGAGTAGAAA TTACCCATGT CTTCACCGTT 15914 ||| ||||| |||| ||| | ||||||| || ||| |||||| |||||||||| ||||||||| GTGACAGTAG AAAAGCGGGT CTAAACCAGC TGAATAGAAA TTACCCATGT CTTCACCGTG 180 TTTTTGACGA GGTTTGTCAC CGGTCCAGAT GTGAACCGGA GTATGAGGGA TGTTTTCAAT 15974 | ||| | | || | |||| |||||||||| || ||||| |||||||| | | || ||||| TCCTTGTCTA GGACTATCAC CGGTCCAGAT ATGGACCGGT GTATGAGGAA TATTCTCAAT 240 AGTACCCTGA CCCGGACTTG GTTCAGAACC CAGAGGGTAA GCAGCACCGA AGAATTGGGA 16034 ||||||| || || || | |||||||| |||||||||| |||||||||| ||||||| || AGTACCCATG CCTGGTTCTG GATCAGAACC CAGAGGGTAA GCAGCACCGA AGAATTGAGA 300 AGGGCAAGGA GCATTAGTAA CCATTTGACG GTACATTAGG GTTAAATTAT TAGTCATTAT 16094 ||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| CGGGCAAGGA GCATTAGTAA CCATTTGACG GTACATTAGT GTTAAATTAT TAGTCATTAT 360 CTGTAGCTGA GGTGTGTCAA CTTCCTTACC AAAATGACCA AGATCAATAA TAGTTCCATT 16154 |||||||||| ||||| || | | |||||||| |||||||||| |||||||||| |||||||||| CTGTAGCTGA GGTGTTTCGA CGTCCTTACC AAAATGACCA AGATCAATAA TAGTTCCATT 420 GCGATGATTT TGGTTACGTT TCTCATCGTA AAGAGATGAT CCCTCACGAT CAAACATGGG 16214 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| GCGATGATTT TGGTTACGTT TCTCATCGTA AAGAGATGAA CCCTCACGAT CAAACATGGG 480 AGGTATACGC ATGCCTTTTG GATGATCCCA ATTCCAGTAA GGTAAAGCAA AAGTTGGATC 16274 |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGTATACGC ATACCTTTTG GATGATCCCA ATTCCAGTAA GGTAAAGCAA AAGTTGGATC 540 ATTAATAAGT GATCCCAAAA TTCTTTCGTA AAA 16307 |||||||||| || ||||| | | |||||||| ||| ATTAATAAGT GACCCCAATA TCCTTTCGTA AAA 573 hqPGS_C08HBa0336I24.1+_SGN-E313577- (15735 16307) ******************************************************************************** EST sequence 90 -strand 701 n (File: SGN-E314781-) 1 CAATAGTACC CATGCCTGTT CTGGATCAGA ACCCAGAGGG TAAGCAGCAC CGAAGAATTG 61 AGACGGGCAA GGAGCATTAG TAACCATTTG ACGGTACATT AGTGTTAAAT TATTAGTCAT 121 TATCTGTAGC TGAGGTGTTT CGACGTCCTT ACCAAAATGA CCAAGATCAA TAATAGTTCC 181 ATTGCGATGA TTTTGGTTAC GTTTCTCATC GTAAAGAGAT GAACCCTCAC GATCAAACAT 241 GGGAGGTATA CGCATACCTT TTGGATGATC CCAATTCCAG TAAGGTAAAG CAAAAGTTGG 301 ATCATTAATA AGTGACCCCA ATATCCTTTC GTAAAAGTAC AAGTACCATC TATGGAACGG 361 AAAGAAAAGC CACGAGAAAT GAACTTGCAA TTCTTTACCA CCAATTTTAT AAGCACCGTT 421 ACAATAAGCA CAATGAATAT TAGCTTGTTG TTTAAACCCA AGAGGGTCAA AAGGGTCTTT 481 ATCAAGTTCC CTCATTCGAC TTGTAGCCAA TTGATACTTG GCTACGTACT CCTCATCCGC 541 CGCATGAGCA GGGGGGCGGA TGCGGAGTTT CGTCATAGGA GGGAACTTGT AGTACGGAAC 601 GCTATCGATA TCATCAGGTA CAGGAGGGCA ACAACTGTAT GAGACTTCAG TACCTTTATC 661 ATCTATATGG GCAACACCAC AAGATTTGAG ATCAGGTGGT G Predicted gene structure (within gDNA segment 15137 to 17821): Exon 1 15971 16669 ( 699 n); cDNA 1 701 ( 701 n); score: 0.926 MATCH C08HBa0336I24.1+ SGN-E314781- 0.926 699 0.997 C PGS_C08HBa0336I24.1+_SGN-E314781- (15971 16669) Alignment (genomic DNA sequence = upper lines): CAATAGTACC CTGACCCGGA CTTGGTTCAG AACCCAGAGG GTAAGCAGCA CCGAAGAATT 16030 |||||||||| | || | | ||| |||| |||||||||| |||||||||| |||||||||| CAATAGTACC CATGCCTGTT C-TGGATCAG AACCCAGAGG GTAAGCAGCA CCGAAGAATT 59 GGGAAGGGCA AGGAGCATTA GTAACCATTT GACGGTACAT TAGGGTTAAA TTATTAGTCA 16090 | || ||||| |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| GAGACGGGCA AGGAGCATTA GTAACCATTT GACGGTACAT TAGTGTTAAA TTATTAGTCA 119 TTATCTGTAG CTGAGGTGTG TCAACTTCCT TACCAAAATG ACCAAGATCA ATAATAGTTC 16150 |||||||||| ||||||||| || || |||| |||||||||| |||||||||| |||||||||| TTATCTGTAG CTGAGGTGTT TCGACGTCCT TACCAAAATG ACCAAGATCA ATAATAGTTC 179 CATTGCGATG ATTTTGGTTA CGTTTCTCAT CGTAAAGAGA TGATCCCTCA CGATCAAACA 16210 |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| CATTGCGATG ATTTTGGTTA CGTTTCTCAT CGTAAAGAGA TGAACCCTCA CGATCAAACA 239 TGGGAGGTAT ACGCATGCCT TTTGGATGAT CCCAATTCCA GTAAGGTAAA GCAAAAGTTG 16270 |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| TGGGAGGTAT ACGCATACCT TTTGGATGAT CCCAATTCCA GTAAGGTAAA GCAAAAGTTG 299 GATCATTAAT AAGTGATCCC AAAATTCTTT CGTAAAAGTA CAAGTACCAT CTATGAAAGG 16330 |||||||||| |||||| ||| || || |||| |||||||||| |||||||||| ||||| || | GATCATTAAT AAGTGACCCC AATATCCTTT CGTAAAAGTA CAAGTACCAT CTATGGAACG 359 GAAAGAAAAG CCACGAGAAA TGAACTTGCA ATTCTTTACC ACCAACTTTG TAAGCACCGT 16390 |||||||||| |||||||||| |||||||||| |||||||||| ||||| ||| |||||||||| GAAAGAAAAG CCACGAGAAA TGAACTTGCA ATTCTTTACC ACCAATTTTA TAAGCACCGT 419 TGCAATAAGC ACAATGAATA TTAGCTTGTT GTTTAAAGCC AAGAGGGTCA AAGGGGTCTT 16450 | |||||||| |||||||||| |||||||||| ||||||| || |||||||||| || ||||||| TACAATAAGC ACAATGAATA TTAGCTTGTT GTTTAAACCC AAGAGGGTCA AAAGGGTCTT 479 TATCAAGTTC CCTCATTCGA CTCGTAGCCA ATTGATACTT GGCTACGTAC TCCTCATCCG 16510 |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| TATCAAGTTC CCTCATTCGA CTTGTAGCCA ATTGATACTT GGCTACGTAC TCCTCATCCG 539 CCGCATGAGC AGGGGGGCGG ATGCGGAGTT TAGTCATAGA AGGGAACTTG TAGTACGGAA 16570 |||||||||| |||||||||| |||||||||| | ||||||| |||||||||| |||||||||| CCGCATGAGC AGGGGGGCGG ATGCGGAGTT TCGTCATAGG AGGGAACTTG TAGTACGGAA 599 CACTATCGAT ATCATCGGGT ACAGGAGGGC AACAACTGTA TATTACATCA ACACC--T-T 16627 | |||||||| |||||| ||| |||||||||| |||||||||| | || ||| ||| | | CGCTATCGAT ATCATCAGGT ACAGGAGGGC AACAACTGTA TGAGACTTCA GTACCTTTAT 659 CTTTTACATG GGCAGTACCA CAAGACTTGA GATCAGGAGG TG 16669 | | || ||| |||| |||| ||||| |||| ||||||| || || CATCTATATG GGCAACACCA CAAGATTTGA GATCAGGTGG TG 701 hqPGS_C08HBa0336I24.1+_SGN-E314781- (15971 16669) ******************************************************************************** EST sequence 323 -strand 711 n (File: SGN-E340679-) 1 GTACCCATGC CTGGTTCTGG ATCAGAACCC CAGAGGGTAA GCAGCACCGA AGAATTGAGA 61 CGGGCAAGGA GCATTAGTAA CCATTTGACG GTACATTAGT GTTAAATTAT TAGTCATTAT 121 CTGTAGCTGA GGTGTTTCGA CGTCCTTACC AAAATGACCA AGATCAATAA TAGTTCCATT 181 GCGATGATTT TGGTTACGTT TCTCATCGTA AAGAGATGAA CCCTCACGAT CAAACATGGG 241 AGGTATACGC ATACCTTTTG GATGATCCCA ATTCCAGTAA GGTAAAGCAA AAGTTGGATC 301 ATTAATAAGT GACCCCAATA TCCTTTCGTA AAAGTACAAG TACCATCTAT GGAACGGAAA 361 GAAAAGCCAC GAGAAATGAA CTTGCAATTC TTTACCACCA ATTTTATAAG CACCGTTACA 421 ATAAGCACAA TGAATATTAG CTTGTTGTTT AAACCCAAGA GGGTCAAAAG GGTCTTTATC 481 AAGTTCCCTC ATTCGACTTG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC 541 ATGAGCAGGG GGGCGGATGC GGAGTTTCGT CATAGGAGGG AACTTGTAGT ACGGAACGCT 601 ATCGATATCA TCAGGTACAG GAGGGCAACA ACTGTATGAG ACTTCAGTAC CTTTATCATC 661 TATATGGGCA ACACCACAAG ATTTGAGATC AGGTGGTGGT ATAGGAGCAG C Predicted gene structure (within gDNA segment 14816 to 17951): Exon 1 15976 16682 ( 707 n); cDNA 1 711 ( 711 n); score: 0.922 MATCH C08HBa0336I24.1+ SGN-E340679- 0.922 707 0.994 C PGS_C08HBa0336I24.1+_SGN-E340679- (15976 16682) Alignment (genomic DNA sequence = upper lines): GTACCCTGAC CCGGACTTGG TTCAGAAC-C CAGAGGGTAA GCAGCACCGA AGAATTGGGA 16034 |||||| | | || ||| ||||||| | |||||||||| |||||||||| ||||||| || GTACCCATGC CTGGTTCTGG ATCAGAACCC CAGAGGGTAA GCAGCACCGA AGAATTGAGA 60 AGGGCAAGGA GCATTAGTAA CCATTTGACG GTACATTAGG GTTAAATTAT TAGTCATTAT 16094 ||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| CGGGCAAGGA GCATTAGTAA CCATTTGACG GTACATTAGT GTTAAATTAT TAGTCATTAT 120 CTGTAGCTGA GGTGTGTCAA CTTCCTTACC AAAATGACCA AGATCAATAA TAGTTCCATT 16154 |||||||||| ||||| || | | |||||||| |||||||||| |||||||||| |||||||||| CTGTAGCTGA GGTGTTTCGA CGTCCTTACC AAAATGACCA AGATCAATAA TAGTTCCATT 180 GCGATGATTT TGGTTACGTT TCTCATCGTA AAGAGATGAT CCCTCACGAT CAAACATGGG 16214 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| GCGATGATTT TGGTTACGTT TCTCATCGTA AAGAGATGAA CCCTCACGAT CAAACATGGG 240 AGGTATACGC ATGCCTTTTG GATGATCCCA ATTCCAGTAA GGTAAAGCAA AAGTTGGATC 16274 |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGTATACGC ATACCTTTTG GATGATCCCA ATTCCAGTAA GGTAAAGCAA AAGTTGGATC 300 ATTAATAAGT GATCCCAAAA TTCTTTCGTA AAAGTACAAG TACCATCTAT GAAAGGGAAA 16334 |||||||||| || ||||| | | |||||||| |||||||||| |||||||||| | || ||||| ATTAATAAGT GACCCCAATA TCCTTTCGTA AAAGTACAAG TACCATCTAT GGAACGGAAA 360 GAAAAGCCAC GAGAAATGAA CTTGCAATTC TTTACCACCA ACTTTGTAAG CACCGTTGCA 16394 |||||||||| |||||||||| |||||||||| |||||||||| | ||| |||| ||||||| || GAAAAGCCAC GAGAAATGAA CTTGCAATTC TTTACCACCA ATTTTATAAG CACCGTTACA 420 ATAAGCACAA TGAATATTAG CTTGTTGTTT AAAGCCAAGA GGGTCAAAGG GGTCTTTATC 16454 |||||||||| |||||||||| |||||||||| ||| |||||| |||||||| | |||||||||| ATAAGCACAA TGAATATTAG CTTGTTGTTT AAACCCAAGA GGGTCAAAAG GGTCTTTATC 480 AAGTTCCCTC ATTCGACTCG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC 16514 |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| AAGTTCCCTC ATTCGACTTG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC 540 ATGAGCAGGG GGGCGGATGC GGAGTTTAGT CATAGAAGGG AACTTGTAGT ACGGAACACT 16574 |||||||||| |||||||||| ||||||| || ||||| |||| |||||||||| ||||||| || ATGAGCAGGG GGGCGGATGC GGAGTTTCGT CATAGGAGGG AACTTGTAGT ACGGAACGCT 600 ATCGATATCA TCGGGTACAG GAGGGCAACA ACTGTATATT ACATCAACAC C--T-TCTTT 16631 |||||||||| || ||||||| |||||||||| ||||||| || ||| || | | || | ATCGATATCA TCAGGTACAG GAGGGCAACA ACTGTATGAG ACTTCAGTAC CTTTATCATC 660 TACATGGGCA GTACCACAAG ACTTGAGATC AGGAGGTGGT ATAGGTGCAG C 16682 || ||||||| |||||||| | |||||||| ||| |||||| ||||| |||| | TATATGGGCA ACACCACAAG ATTTGAGATC AGGTGGTGGT ATAGGAGCAG C 711 hqPGS_C08HBa0336I24.1+_SGN-E340679- (15976 16682) ******************************************************************************** EST sequence 310 -strand 539 n (File: SGN-E321823-) 1 CCATGCCTGG TTCTGGATCA GAACCCAGAG GGTAAGCAGC ACGGAAGAAT TGAGACGGGC 61 AAGGAGCATT AGTAACCATT TGACGGTACA TTAGTGTTAA ATTATTAGTC ATTATCTGTA 121 GCTGAGGTGT TTCGACGTCC TTACCAAAAT GACCAAGATC AATAATAGTT CCATTGCGAT 181 GATTTTGGTT ACGTTTCTCA TCGTAAAGAG ATGAACCCTC ACGATCAAAC ATGGGAGGTA 241 TACGCATACC TTTTGGATGA TCCCAATTCC AGTAAGGTAA AGCAAAAGTT GGATCATTAA 301 TAAGTGACCC CAATATCCTT TCGTAAAAGT ACAAGTACCA TCTATGGAAC GGAAAGAAAA 361 GCCACGAGAA ATGAACTTGC AATTCTTTAC CACCAATTTT ATAAGCACCG TTACAATAAG 421 CACAATGAAT ATTAGCTTGT TGTTTAAACC CAAGAGGGTC AAAAGGGTCT TTATCAAGTT 481 CCCTCATTCG ACTTGTAGCC AATTGATACT TGGCTACGTA CTCCTCATCC GCCGCATGA Predicted gene structure (within gDNA segment 15217 to 17118): Exon 1 15979 16518 ( 540 n); cDNA 1 539 ( 539 n); score: 0.950 MATCH C08HBa0336I24.1+ SGN-E321823- 0.950 540 1.002 C PGS_C08HBa0336I24.1+_SGN-E321823- (15979 16518) Alignment (genomic DNA sequence = upper lines): CCCTGACCCG GACTTGGTTC AGAACCCAGA GGGTAAGCAG CACCGAAGAA TTGGGAAGGG 16038 || || || | | ||| || |||||||||| |||||||||| ||| |||||| ||| || ||| CCATG-CCTG GTTCTGGATC AGAACCCAGA GGGTAAGCAG CACGGAAGAA TTGAGACGGG 59 CAAGGAGCAT TAGTAACCAT TTGACGGTAC ATTAGGGTTA AATTATTAGT CATTATCTGT 16098 |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| CAAGGAGCAT TAGTAACCAT TTGACGGTAC ATTAGTGTTA AATTATTAGT CATTATCTGT 119 AGCTGAGGTG TGTCAACTTC CTTACCAAAA TGACCAAGAT CAATAATAGT TCCATTGCGA 16158 |||||||||| | || || || |||||||||| |||||||||| |||||||||| |||||||||| AGCTGAGGTG TTTCGACGTC CTTACCAAAA TGACCAAGAT CAATAATAGT TCCATTGCGA 179 TGATTTTGGT TACGTTTCTC ATCGTAAAGA GATGATCCCT CACGATCAAA CATGGGAGGT 16218 |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| TGATTTTGGT TACGTTTCTC ATCGTAAAGA GATGAACCCT CACGATCAAA CATGGGAGGT 239 ATACGCATGC CTTTTGGATG ATCCCAATTC CAGTAAGGTA AAGCAAAAGT TGGATCATTA 16278 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATACGCATAC CTTTTGGATG ATCCCAATTC CAGTAAGGTA AAGCAAAAGT TGGATCATTA 299 ATAAGTGATC CCAAAATTCT TTCGTAAAAG TACAAGTACC ATCTATGAAA GGGAAAGAAA 16338 |||||||| | |||| || || |||||||||| |||||||||| ||||||| || ||||||||| ATAAGTGACC CCAATATCCT TTCGTAAAAG TACAAGTACC ATCTATGGAA CGGAAAGAAA 359 AGCCACGAGA AATGAACTTG CAATTCTTTA CCACCAACTT TGTAAGCACC GTTGCAATAA 16398 |||||||||| |||||||||| |||||||||| ||||||| || | |||||||| ||| |||||| AGCCACGAGA AATGAACTTG CAATTCTTTA CCACCAATTT TATAAGCACC GTTACAATAA 419 GCACAATGAA TATTAGCTTG TTGTTTAAAG CCAAGAGGGT CAAAGGGGTC TTTATCAAGT 16458 |||||||||| |||||||||| ||||||||| |||||||||| |||| ||||| |||||||||| GCACAATGAA TATTAGCTTG TTGTTTAAAC CCAAGAGGGT CAAAAGGGTC TTTATCAAGT 479 TCCCTCATTC GACTCGTAGC CAATTGATAC TTGGCTACGT ACTCCTCATC CGCCGCATGA 16518 |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCCTCATTC GACTTGTAGC CAATTGATAC TTGGCTACGT ACTCCTCATC CGCCGCATGA 539 hqPGS_C08HBa0336I24.1+_SGN-E321823- (15979 16518) ******************************************************************************** EST sequence 116 -strand 750 n (File: SGN-E314333-) 1 CCCAGAGGGG TAAGCAGCAC CGAAGAATGA GACGGGGCAA GGAGCATTAG TAACCATTGA 61 CGGGTACATT AGTGTAAATT TATTAGTCAT TATCTGTAGC TGAGGTGTTT CGACGTCCTT 121 ACCAAAATGA CCAAGATCAA TAATAGTTCC ATTGCGATGA TTTTGGTTAC GTTTCTCATC 181 GTAAAGAGAT GAACCCTCAC GATCAAACAT GGGAGGTATA CGCATACCTT TTGGATGATC 241 CCAATTCCAG TAAGGTAAAG CAAAAGTTGG ATCATTAATA AGTGACCCCA ATATCCTTTC 301 GTAAAAGTAC AAGTACCATC TATGGAACGG AAAGAAAAGC CACGAGAAAT GAACTTGCAA 361 TTCTTTACCA CCAATTTTAT AAGCACCGTT ACAATAAGCA CAATGAATAT TAGCTTGTTG 421 TTTAAACCCA AGAGGGTCAA AAGGGTCTTT ATCAAGTTCC CTCATTCGAC TTGTAGCCAA 481 TTGATACTTG GCTACGTACT CCTCATCCGC CGCATGAGCA GGGGGGCGGA TGCGGAGTTT 541 CGTCATAGGA GGGAACTTGT AGTACGGAAC GCTATCGATA TCATCAGGTA CAGGAGGGCA 601 ACAACTGTAT GAGACTTCAG TACCTTTATC ATCTATATGG GCAACACCAC AAGATTTGAG 661 ATCAGGTGGT GGTATAGGAG CAGCAGAGGC TAATGGTGCA AGATTAGCTG CACCATAAAA 721 ACCTCCTAAC CCTAAAAGAA CATTTCTCCT Predicted gene structure (within gDNA segment 15329 to 17429): Exon 1 16003 16748 ( 746 n); cDNA 1 750 ( 750 n); score: 0.917 MATCH C08HBa0336I24.1+ SGN-E314333- 0.917 746 0.995 C PGS_C08HBa0336I24.1+_SGN-E314333- (16003 16748) Alignment (genomic DNA sequence = upper lines): CCCAGA-GGG TAAGCAGCAC CGAAGAATTG GGAAGGGCAA GGAGCATTAG TAACCATTTG 16061 |||||| ||| |||||||||| |||||||| | |||||| |||||||||| |||||||| CCCAGAGGGG TAAGCAGCAC CGAAGAATGA GACGGGGCAA GGAGCATTAG TAACCATTGA 60 ACGGTACATT AGGGTTAAAT TATTAGTCAT TATCTGTAGC TGAGGTGTGT CAACTTCCTT 16121 |||||||| || || || | |||||||||| |||||||||| |||||||| | | || ||||| CGGGTACATT AGTGTAAATT TATTAGTCAT TATCTGTAGC TGAGGTGTTT CGACGTCCTT 120 ACCAAAATGA CCAAGATCAA TAATAGTTCC ATTGCGATGA TTTTGGTTAC GTTTCTCATC 16181 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAAAATGA CCAAGATCAA TAATAGTTCC ATTGCGATGA TTTTGGTTAC GTTTCTCATC 180 GTAAAGAGAT GATCCCTCAC GATCAAACAT GGGAGGTATA CGCATGCCTT TTGGATGATC 16241 |||||||||| || ||||||| |||||||||| |||||||||| ||||| |||| |||||||||| GTAAAGAGAT GAACCCTCAC GATCAAACAT GGGAGGTATA CGCATACCTT TTGGATGATC 240 CCAATTCCAG TAAGGTAAAG CAAAAGTTGG ATCATTAATA AGTGATCCCA AAATTCTTTC 16301 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| | || ||||| CCAATTCCAG TAAGGTAAAG CAAAAGTTGG ATCATTAATA AGTGACCCCA ATATCCTTTC 300 GTAAAAGTAC AAGTACCATC TATGAAAGGG AAAGAAAAGC CACGAGAAAT GAACTTGCAA 16361 |||||||||| |||||||||| |||| || || |||||||||| |||||||||| |||||||||| GTAAAAGTAC AAGTACCATC TATGGAACGG AAAGAAAAGC CACGAGAAAT GAACTTGCAA 360 TTCTTTACCA CCAACTTTGT AAGCACCGTT GCAATAAGCA CAATGAATAT TAGCTTGTTG 16421 |||||||||| |||| ||| | |||||||||| ||||||||| |||||||||| |||||||||| TTCTTTACCA CCAATTTTAT AAGCACCGTT ACAATAAGCA CAATGAATAT TAGCTTGTTG 420 TTTAAAGCCA AGAGGGTCAA AGGGGTCTTT ATCAAGTTCC CTCATTCGAC TCGTAGCCAA 16481 |||||| ||| |||||||||| | |||||||| |||||||||| |||||||||| | |||||||| TTTAAACCCA AGAGGGTCAA AAGGGTCTTT ATCAAGTTCC CTCATTCGAC TTGTAGCCAA 480 TTGATACTTG GCTACGTACT CCTCATCCGC CGCATGAGCA GGGGGGCGGA TGCGGAGTTT 16541 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATACTTG GCTACGTACT CCTCATCCGC CGCATGAGCA GGGGGGCGGA TGCGGAGTTT 540 AGTCATAGAA GGGAACTTGT AGTACGGAAC ACTATCGATA TCATCGGGTA CAGGAGGGCA 16601 ||||||| | |||||||||| |||||||||| ||||||||| ||||| |||| |||||||||| CGTCATAGGA GGGAACTTGT AGTACGGAAC GCTATCGATA TCATCAGGTA CAGGAGGGCA 600 ACAACTGTAT ATTACATCAA CACC--T-TC TTTTACATGG GCAGTACCAC AAGACTTGAG 16658 |||||||||| || ||| ||| | || | || |||| ||| ||||| |||| ||||| ACAACTGTAT GAGACTTCAG TACCTTTATC ATCTATATGG GCAACACCAC AAGATTTGAG 660 ATCAGGAGGT GGTATAGGTG CAGCAGTCGC TAATGGTGCA AGATTAGCTG CACCATAAAG 16718 |||||| ||| |||||||| | |||||| || |||||||||| |||||||||| ||||||||| ATCAGGTGGT GGTATAGGAG CAGCAGAGGC TAATGGTGCA AGATTAGCTG CACCATAAAA 720 ACCTCCTAAC CCTAAAAGAA CGTTTCGTCT 16748 |||||||||| |||||||||| | |||| || ACCTCCTAAC CCTAAAAGAA CATTTCTCCT 750 hqPGS_C08HBa0336I24.1+_SGN-E314333- (16003 16748) ******************************************************************************** EST sequence 88 -strand 589 n (File: SGN-E326293-) 1 GCAAGGAGCA TTAGTAACCA TTTGACGGTA CATTAGTTGT TAAATTATTA GTCATTATCT 61 GTAGCTGAGG TGTTTCGACG TCCTTACCAA AATGACCAAG ATCAATAATA GTTCCATTGC 121 GATGATTTTG GTTACGTTTC TCATCGTAAA GAGATGAACC CTCACGATCA AACATGGGAG 181 GTATACGCAT ACCTTTTGGA TGATCCCAAT TCCAGTAAGG TAAAGCAAAA GTTGGATCAT 241 TAATAAGTGA CCCCAATATC CTTTCGTAAA AGTACAAGTA CCATCTATGG AACGGAAAGA 301 AAAGCCACGA GAAATGAACT TGCAATTCTT TACCACCAAT TTTATAAGCA CCGTTACAAT 361 AAGCACAATG AATATTAGCT TGTTGTTTAA ACCCAAGAGG GTCAAAAGGG TCTTTATCAA 421 GTTCCCTCAT TCGACTTGTA GCCAATTGAT ACTTGGCTAC GTACTCCTCA TCCGCCGCAT 481 GAGCAGGGGG GCGGATGCGG AGTTTCGTCA TAGGAGGGAA CTTGTAGTAC GGAACGCAAT 541 CGACATCATC CCGTACAGGA GGGCAACAAC TGTATGAGAC TAAAGTACC Predicted gene structure (within gDNA segment 15428 to 17351): Exon 1 16038 16607 ( 570 n); cDNA 1 571 ( 571 n); score: 0.954 MATCH C08HBa0336I24.1+ SGN-E326293- 0.954 570 0.968 C PGS_C08HBa0336I24.1+_SGN-E326293- (16038 16607) Alignment (genomic DNA sequence = upper lines): GCAAGGAGCA TTAGTAACCA TTTGACGGTA CATTAG-GGT TAAATTATTA GTCATTATCT 16096 |||||||||| |||||||||| |||||||||| |||||| || |||||||||| |||||||||| GCAAGGAGCA TTAGTAACCA TTTGACGGTA CATTAGTTGT TAAATTATTA GTCATTATCT 60 GTAGCTGAGG TGTGTCAACT TCCTTACCAA AATGACCAAG ATCAATAATA GTTCCATTGC 16156 |||||||||| ||| || || |||||||||| |||||||||| |||||||||| |||||||||| GTAGCTGAGG TGTTTCGACG TCCTTACCAA AATGACCAAG ATCAATAATA GTTCCATTGC 120 GATGATTTTG GTTACGTTTC TCATCGTAAA GAGATGATCC CTCACGATCA AACATGGGAG 16216 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| GATGATTTTG GTTACGTTTC TCATCGTAAA GAGATGAACC CTCACGATCA AACATGGGAG 180 GTATACGCAT GCCTTTTGGA TGATCCCAAT TCCAGTAAGG TAAAGCAAAA GTTGGATCAT 16276 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTATACGCAT ACCTTTTGGA TGATCCCAAT TCCAGTAAGG TAAAGCAAAA GTTGGATCAT 240 TAATAAGTGA TCCCAAAATT CTTTCGTAAA AGTACAAGTA CCATCTATGA AAGGGAAAGA 16336 |||||||||| ||||| || |||||||||| |||||||||| ||||||||| || ||||||| TAATAAGTGA CCCCAATATC CTTTCGTAAA AGTACAAGTA CCATCTATGG AACGGAAAGA 300 AAAGCCACGA GAAATGAACT TGCAATTCTT TACCACCAAC TTTGTAAGCA CCGTTGCAAT 16396 |||||||||| |||||||||| |||||||||| ||||||||| ||| |||||| ||||| |||| AAAGCCACGA GAAATGAACT TGCAATTCTT TACCACCAAT TTTATAAGCA CCGTTACAAT 360 AAGCACAATG AATATTAGCT TGTTGTTTAA AGCCAAGAGG GTCAAAGGGG TCTTTATCAA 16456 |||||||||| |||||||||| |||||||||| | |||||||| |||||| ||| |||||||||| AAGCACAATG AATATTAGCT TGTTGTTTAA ACCCAAGAGG GTCAAAAGGG TCTTTATCAA 420 GTTCCCTCAT TCGACTCGTA GCCAATTGAT ACTTGGCTAC GTACTCCTCA TCCGCCGCAT 16516 |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| GTTCCCTCAT TCGACTTGTA GCCAATTGAT ACTTGGCTAC GTACTCCTCA TCCGCCGCAT 480 GAGCAGGGGG GCGGATGCGG AGTTTAGTCA TAGAAGGGAA CTTGTAGTAC GGAACACTAT 16576 |||||||||| |||||||||| ||||| |||| ||| |||||| |||||||||| ||||| | || GAGCAGGGGG GCGGATGCGG AGTTTCGTCA TAGGAGGGAA CTTGTAGTAC GGAACGCAAT 540 CGATATCATC GGGTACAGGA GGGCAACAAC T 16607 ||| |||||| |||||||| |||||||||| | CGACATCATC CCGTACAGGA GGGCAACAAC T 571 hqPGS_C08HBa0336I24.1+_SGN-E326293- (16038 16607) ******************************************************************************** EST sequence 67 -strand 577 n (File: SGN-E313171-) 1 GGAGCATTAG TAACCATTTG ACGGTACATT AGTGTTAAAT TATTAGTCAT TATCTGTAGC 61 TGAGGTGTTT CGACGTCCTT ACCAAAATGA CCAAGATCAA TAATAGTTCC ATTGCGATGA 121 TTTTGGTTAC GTTTCTCATC GTAAAGAGAT GAACCCTCAC GATCAAACAT GGGAGGTATA 181 CGCATACCTT TTGGATGATC CCAATTCCAG TAAGGTAAAG CAAAAGTTGG ATCATTAATA 241 AGTGACCCCA ATATCCTTTC GTAAAAGTAC AAGTACCATC TATGGAACGG AAAGAAAAGC 301 CACGAGAAAT GAACTTGCAA TTCTTTACCA CCAATTTTAT AAGCACCGTT ACAATAAGCA 361 CAATGAATAT TAGCTTGTTG TTTAAACCCA AGAGGGTCAA AAGGGTCTTT ATCAAGTTCC 421 CTCATTCGAC TTGTAGCCAA TTGATACTTG GCTACGTACT CCTCATCCGC CGCATGAGCA 481 GGGGGGCGGA TGCGGAGTTT CGTCATAGGA GGGAACTTGT AGTACGGAAC GCTATCGATA 541 TCATCAGGTA CAGGAGGGCA ACAACTGTAT GAGACTT Predicted gene structure (within gDNA segment 15432 to 17281): Exon 1 16042 16616 ( 575 n); cDNA 1 575 ( 575 n); score: 0.958 MATCH C08HBa0336I24.1+ SGN-E313171- 0.958 575 0.997 C PGS_C08HBa0336I24.1+_SGN-E313171- (16042 16616) Alignment (genomic DNA sequence = upper lines): GGAGCATTAG TAACCATTTG ACGGTACATT AGGGTTAAAT TATTAGTCAT TATCTGTAGC 16101 |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| GGAGCATTAG TAACCATTTG ACGGTACATT AGTGTTAAAT TATTAGTCAT TATCTGTAGC 60 TGAGGTGTGT CAACTTCCTT ACCAAAATGA CCAAGATCAA TAATAGTTCC ATTGCGATGA 16161 |||||||| | | || ||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAGGTGTTT CGACGTCCTT ACCAAAATGA CCAAGATCAA TAATAGTTCC ATTGCGATGA 120 TTTTGGTTAC GTTTCTCATC GTAAAGAGAT GATCCCTCAC GATCAAACAT GGGAGGTATA 16221 |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| TTTTGGTTAC GTTTCTCATC GTAAAGAGAT GAACCCTCAC GATCAAACAT GGGAGGTATA 180 CGCATGCCTT TTGGATGATC CCAATTCCAG TAAGGTAAAG CAAAAGTTGG ATCATTAATA 16281 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCATACCTT TTGGATGATC CCAATTCCAG TAAGGTAAAG CAAAAGTTGG ATCATTAATA 240 AGTGATCCCA AAATTCTTTC GTAAAAGTAC AAGTACCATC TATGAAAGGG AAAGAAAAGC 16341 ||||| |||| | || ||||| |||||||||| |||||||||| |||| || || |||||||||| AGTGACCCCA ATATCCTTTC GTAAAAGTAC AAGTACCATC TATGGAACGG AAAGAAAAGC 300 CACGAGAAAT GAACTTGCAA TTCTTTACCA CCAACTTTGT AAGCACCGTT GCAATAAGCA 16401 |||||||||| |||||||||| |||||||||| |||| ||| | |||||||||| ||||||||| CACGAGAAAT GAACTTGCAA TTCTTTACCA CCAATTTTAT AAGCACCGTT ACAATAAGCA 360 CAATGAATAT TAGCTTGTTG TTTAAAGCCA AGAGGGTCAA AGGGGTCTTT ATCAAGTTCC 16461 |||||||||| |||||||||| |||||| ||| |||||||||| | |||||||| |||||||||| CAATGAATAT TAGCTTGTTG TTTAAACCCA AGAGGGTCAA AAGGGTCTTT ATCAAGTTCC 420 CTCATTCGAC TCGTAGCCAA TTGATACTTG GCTACGTACT CCTCATCCGC CGCATGAGCA 16521 |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCATTCGAC TTGTAGCCAA TTGATACTTG GCTACGTACT CCTCATCCGC CGCATGAGCA 480 GGGGGGCGGA TGCGGAGTTT AGTCATAGAA GGGAACTTGT AGTACGGAAC ACTATCGATA 16581 |||||||||| |||||||||| ||||||| | |||||||||| |||||||||| ||||||||| GGGGGGCGGA TGCGGAGTTT CGTCATAGGA GGGAACTTGT AGTACGGAAC GCTATCGATA 540 TCATCGGGTA CAGGAGGGCA ACAACTGTAT ATTAC 16616 ||||| |||| |||||||||| |||||||||| || TCATCAGGTA CAGGAGGGCA ACAACTGTAT GAGAC 575 hqPGS_C08HBa0336I24.1+_SGN-E313171- (16042 16616) ******************************************************************************** EST sequence 181 -strand 707 n (File: SGN-E317072-) 1 AAATGACCAA GATCAATAAT AGTTCCATTG CGATGATTTT GTTACGTTTC TCATCGTAAA 61 GAGATGAACC CTCACGATCA AACATGGGAG GTATACGCAT ACCTTTTGGA TGATCCCAAT 121 TCCAGTAAGG TAAAGCAAAA GTTGGATCAT TAATAAGTGA CCCCAATATC CTTTCGTAAA 181 AGTACAAGTA CCATCTATGG AACGGAAAGA AAAGCCACGA GAAATGAACT TGCAATTCTT 241 TACCACCAAT TTTATAAGCA CCGTTACAAT AAGCACAATG AATATTAGCT TGTTGTTTAA 301 ACCCAAGAGG GTCAAAAGGG TCTTTATCAA GTTCCCTCAT TCGACTTGTA GCCAATTGAT 361 ACTTGGCTAC GTACTCCTCA TCCGCCGCAT GAGCAGGGGG GCGGATGCGG AGTTTCGTCA 421 TAGGAGGGAA CTTGTAGTAC GGAACGCTAT CGATATCATC AGGTACAGGA GGGCAACAAC 481 TGTATGAGAC TTCAGTACCT TTATCATCTA TATGGGCAAC ACCACAAGAT TTGAGATCAG 541 GTGGTGGTAT AGGAGCAGCA GAGGCTAATG GTGCAAGATT AGCTGCACCA TAAAAACCTC 601 CTAACCCTAA AAGAACATTT CTCCTATCAA CAGCGTCAAG GTTTTTGTCA TGCTCGCCAA 661 CGTTGCATGA AACCTTGAAA CTTTGACAGC GCCTTCCATG GAGGAAA Predicted gene structure (within gDNA segment 15516 to 18249): Exon 1 16126 16830 ( 705 n); cDNA 1 707 ( 707 n); score: 0.917 MATCH C08HBa0336I24.1+ SGN-E317072- 0.917 705 0.997 C PGS_C08HBa0336I24.1+_SGN-E317072- (16126 16830) Alignment (genomic DNA sequence = upper lines): AAATGACCAA GATCAATAAT AGTTCCATTG CGATGATTTT GGTTACGTTT CTCATCGTAA 16185 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| AAATGACCAA GATCAATAAT AGTTCCATTG CGATGATTTT -GTTACGTTT CTCATCGTAA 59 AGAGATGATC CCTCACGATC AAACATGGGA GGTATACGCA TGCCTTTTGG ATGATCCCAA 16245 |||||||| | |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| AGAGATGAAC CCTCACGATC AAACATGGGA GGTATACGCA TACCTTTTGG ATGATCCCAA 119 TTCCAGTAAG GTAAAGCAAA AGTTGGATCA TTAATAAGTG ATCCCAAAAT TCTTTCGTAA 16305 |||||||||| |||||||||| |||||||||| |||||||||| | ||||| || ||||||||| TTCCAGTAAG GTAAAGCAAA AGTTGGATCA TTAATAAGTG ACCCCAATAT CCTTTCGTAA 179 AAGTACAAGT ACCATCTATG AAAGGGAAAG AAAAGCCACG AGAAATGAAC TTGCAATTCT 16365 |||||||||| |||||||||| || |||||| |||||||||| |||||||||| |||||||||| AAGTACAAGT ACCATCTATG GAACGGAAAG AAAAGCCACG AGAAATGAAC TTGCAATTCT 239 TTACCACCAA CTTTGTAAGC ACCGTTGCAA TAAGCACAAT GAATATTAGC TTGTTGTTTA 16425 |||||||||| ||| ||||| |||||| ||| |||||||||| |||||||||| |||||||||| TTACCACCAA TTTTATAAGC ACCGTTACAA TAAGCACAAT GAATATTAGC TTGTTGTTTA 299 AAGCCAAGAG GGTCAAAGGG GTCTTTATCA AGTTCCCTCA TTCGACTCGT AGCCAATTGA 16485 || ||||||| ||||||| || |||||||||| |||||||||| ||||||| || |||||||||| AACCCAAGAG GGTCAAAAGG GTCTTTATCA AGTTCCCTCA TTCGACTTGT AGCCAATTGA 359 TACTTGGCTA CGTACTCCTC ATCCGCCGCA TGAGCAGGGG GGCGGATGCG GAGTTTAGTC 16545 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| TACTTGGCTA CGTACTCCTC ATCCGCCGCA TGAGCAGGGG GGCGGATGCG GAGTTTCGTC 419 ATAGAAGGGA ACTTGTAGTA CGGAACACTA TCGATATCAT CGGGTACAGG AGGGCAACAA 16605 |||| ||||| |||||||||| |||||| ||| |||||||||| | |||||||| |||||||||| ATAGGAGGGA ACTTGTAGTA CGGAACGCTA TCGATATCAT CAGGTACAGG AGGGCAACAA 479 CTGTATATTA CATCAACACC --T-TCTTTT ACATGGGCAG TACCACAAGA CTTGAGATCA 16662 |||||| | | ||| ||| | || | | | ||||||| ||||||||| ||||||||| CTGTATGAGA CTTCAGTACC TTTATCATCT ATATGGGCAA CACCACAAGA TTTGAGATCA 539 GGAGGTGGTA TAGGTGCAGC AGTCGCTAAT GGTGCAAGAT TAGCTGCACC ATAAAGACCT 16722 || ||||||| |||| ||||| || |||||| |||||||||| |||||||||| ||||| |||| GGTGGTGGTA TAGGAGCAGC AGAGGCTAAT GGTGCAAGAT TAGCTGCACC ATAAAAACCT 599 CCTAACCCTA AAAGAACGTT TCGTCTATCA ACAGCGTCAG GGTTTTTGTC AACGTTGTTT 16782 |||||||||| ||||||| || || |||||| ||||||||| |||||||||| | | | CCTAACCCTA AAAGAACATT TCTCCTATCA ACAGCGTCAA GGTTTTTGTC ATGCTCGCCA 659 GCGTTGCATG AAACCTTGAA ACTTTGATTA CGCCTTCCGT GGAGGAAA 16830 ||||||||| |||||||||| ||||||| |||||||| | |||||||| ACGTTGCATG AAACCTTGAA ACTTTGACAG CGCCTTCCAT GGAGGAAA 707 hqPGS_C08HBa0336I24.1+_SGN-E317072- (16126 16830) ******************************************************************************** EST sequence 217 -strand 801 n (File: SGN-E329108-) 1 CAAGATCAAT AATAGTTCCA TTGCGATGAT TTGGTTACGT TTCTCATCGT AAAGAGATGA 61 CCCTTCACGA TCAAACATGG GAGGTATACG CATACCTTTG GATGATCCCA ATTCCAGTAA 121 GGTAAAGCAA AAGTTGGATC ATTAATAAGT GACCCCAATA TCCTTTCGTA AAAGTACAAG 181 TACCATCTAT GGAACGGAAA GAAAAGCCAC GAGAAATGAA CTTGCAATTC TTTACCACCA 241 ATTTTATAAG CACCGTTACA ATAAGCACAA TGAATATTAG CTTGTTGTTT AAACCCAAGA 301 GGGTCAAAAG GGTCTTTATC AAGTTCCCTC ATTCGACTTG TAGCCAATTG ATACTTGGCT 361 ACGTACTCCT CATCCGCCGC ATGAGCAGGG GGGCGGATGC GGAGTTTCGT CATAGGAGGG 421 AACTTGTAGT ACGGAACGCT ATCGATATCA TCAGGTACAG GAGGGCAACA ACTGTATGAG 481 ACTTCAGTAC CTTTATCATC TATATGGGCA ACACCACAAG ATTTGAGATC AGGTGGTGGT 541 ATAGGAGCAG CAGAGGCTAA TGGTGCAAGA TTAGCTGCAC CATAAAAACC TCCTAACCCT 601 AAAAGAACAT TTCTCCTATC AACAGCGTCA AGGTTTTTGT CATGCTCGCC AACGTTGCAT 661 GAAACCTTGA AACTTTGACA GCGCCTTCCA TGGAGGAAAG GTTGAGAGGG TTTTGATAAG 721 AAAGTAGAGT GGTTGTTGGT GAAGGGAGAA GAGAGGGATT TGTTGGTGGA TAATAAAGGA 781 AGAGTATTAG GAGTAGAAGA A Predicted gene structure (within gDNA segment 15523 to 19269): Exon 1 16133 16932 ( 800 n); cDNA 1 801 ( 801 n); score: 0.899 MATCH C08HBa0336I24.1+ SGN-E329108- 0.899 800 0.999 C PGS_C08HBa0336I24.1+_SGN-E329108- (16133 16932) Alignment (genomic DNA sequence = upper lines): CAAGATCAAT AATAGTTCCA TTGCGATGAT TTTGGTTACG TTTCTCATCG TAAAGAGATG 16192 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| CAAGATCAAT AATAGTTCCA TTGCGATGA- TTTGGTTACG TTTCTCATCG TAAAGAGATG 59 ATCCCTCACG ATCAAACATG GGAGGTATAC GCATGCCTTT TGGATGATCC CAATTCCAGT 16252 | || ||||| |||||||||| |||||||||| |||| || || |||||||||| |||||||||| ACCCTTCACG ATCAAACATG GGAGGTATAC GCATACC-TT TGGATGATCC CAATTCCAGT 118 AAGGTAAAGC AAAAGTTGGA TCATTAATAA GTGATCCCAA AATTCTTTCG TAAAAGTACA 16312 |||||||||| |||||||||| |||||||||| |||| ||||| || |||||| |||||||||| AAGGTAAAGC AAAAGTTGGA TCATTAATAA GTGACCCCAA TATCCTTTCG TAAAAGTACA 178 AGTACCATCT ATGAAAGGGA AAGAAAAGCC ACGAGAAATG AACTTGCAAT TCTTTACCAC 16372 |||||||||| ||| || ||| |||||||||| |||||||||| |||||||||| |||||||||| AGTACCATCT ATGGAACGGA AAGAAAAGCC ACGAGAAATG AACTTGCAAT TCTTTACCAC 238 CAACTTTGTA AGCACCGTTG CAATAAGCAC AATGAATATT AGCTTGTTGT TTAAAGCCAA 16432 ||| ||| || ||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CAATTTTATA AGCACCGTTA CAATAAGCAC AATGAATATT AGCTTGTTGT TTAAACCCAA 298 GAGGGTCAAA GGGGTCTTTA TCAAGTTCCC TCATTCGACT CGTAGCCAAT TGATACTTGG 16492 |||||||||| ||||||||| |||||||||| |||||||||| ||||||||| |||||||||| GAGGGTCAAA AGGGTCTTTA TCAAGTTCCC TCATTCGACT TGTAGCCAAT TGATACTTGG 358 CTACGTACTC CTCATCCGCC GCATGAGCAG GGGGGCGGAT GCGGAGTTTA GTCATAGAAG 16552 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| ||||||| || CTACGTACTC CTCATCCGCC GCATGAGCAG GGGGGCGGAT GCGGAGTTTC GTCATAGGAG 418 GGAACTTGTA GTACGGAACA CTATCGATAT CATCGGGTAC AGGAGGGCAA CAACTGTATA 16612 |||||||||| ||||||||| |||||||||| |||| ||||| |||||||||| ||||||||| GGAACTTGTA GTACGGAACG CTATCGATAT CATCAGGTAC AGGAGGGCAA CAACTGTATG 478 TTACATCAAC ACC--T-TCT TTTACATGGG CAGTACCACA AGACTTGAGA TCAGGAGGTG 16669 || ||| ||| | || | || ||||| || |||||| ||| |||||| ||||| |||| AGACTTCAGT ACCTTTATCA TCTATATGGG CAACACCACA AGATTTGAGA TCAGGTGGTG 538 GTATAGGTGC AGCAGTCGCT AATGGTGCAA GATTAGCTGC ACCATAAAGA CCTCCTAACC 16729 ||||||| || ||||| ||| |||||||||| |||||||||| |||||||| | |||||||||| GTATAGGAGC AGCAGAGGCT AATGGTGCAA GATTAGCTGC ACCATAAAAA CCTCCTAACC 598 CTAAAAGAAC GTTTCGTCTA TCAACAGCGT CAGGGTTTTT GTCAACGTTG TTTGCGTTGC 16789 |||||||||| |||| ||| |||||||||| || ||||||| |||| | | |||||| CTAAAAGAAC ATTTCTCCTA TCAACAGCGT CAAGGTTTTT GTCATGCTCG CCAACGTTGC 658 ATGAAACCTT GAAACTTTGA TTACGCCTTC CGTGGAGGAA AAGTTGAGAG GGTTTTGATA 16849 |||||||||| |||||||||| ||||||| | |||||||| | |||||||| |||||||||| ATGAAACCTT GAAACTTTGA CAGCGCCTTC CATGGAGGAA AGGTTGAGAG GGTTTTGATA 718 ACAAGGATGA GTTGGTGGTG GTGAAGGAAG AAGAGAGGGA TTTGTTGGTG CATAAAGGAA 16909 | || | || || | || || ||||||| || |||||||||| |||||||||| |||| | AGAAAGTAGA GTGGTTGTTG GTGAAGGGAG AAGAGAGGGA TTTGTTGGTG GATAATAAAG 778 GAGTAGTAGT AATAGAAGAA GAA 16932 || |||| | | || |||| ||| GAAGAGTATT AGGAGTAGAA GAA 801 hqPGS_C08HBa0336I24.1+_SGN-E329108- (16133 16932) ******************************************************************************** EST sequence 153 -strand 786 n (File: SGN-E316553-) 1 GATCAATAAT AGTTCCATTG CGATGATTTA GTTACGTTTC TCATCGTAAA GAGATGATCC 61 CTCACGATCA AACATGGGAG GTATACGCAT GCCTTTTGGA TGATCCCAAT TCCAGTAAGG 121 TAAAGCAAAA GTTGGATCAT TAATAAGTGA TCCCAAAATT CTTTCGTAAA AGTACAAGTA 181 CCATCTATGA AAGGGAAAGA AAAGCCACGA GAAATGAACT TGCAATTCTT TACCACCAAC 241 TTTGTAAGCA CCGTTGCAAT AAGCACAATG AATATTAGCT TGTTGTTTAA AGCCAAGAGG 301 GTCAAAGGGG TCTTTATCAA GTTCCCTCAT TCGACTCGTA GCCAATTGAT ACTTGGCTAC 361 GTACTCCTCA TCCGCCGCAT GAGCAGGGGG GCGGATGCGG AGTTTAGTCA TAGAAGGGAA 421 CTTGTAGTAC GGAACACTAT CGATATCATC GGGTACAGGA GGGCAACAAC TGTATATTAC 481 ATCAACACCT TCTTTTACAT GGGCAGTACC ACAAGACTTG AGATCAGGAG GTGGTATAGG 541 TGCAGCAGTC GCTAATGGTG CAAGATTAGC TGCACCATAA AGACCTCCTA ACCCTAAAAG 601 AACGTTTCGT CTATCAACAG CGTCAGGGTT TTTGTCAACG TTGTTTGCGT TGCATGAAAC 661 CTTGAAACTT TGATTACGCC TTCCGTGGAG GAAAAGTTGA GAGGGTTTTG ATAACAAGGA 721 TGAGTTGGTG GTGGTGAAGG AAGAAGAGAG GGATTTGTTG GTGCATAAAG GAAGAGTAGT 781 AGTAAT Predicted gene structure (within gDNA segment 15526 to 17522): Exon 1 16136 16922 ( 787 n); cDNA 1 786 ( 786 n); score: 0.997 MATCH C08HBa0336I24.1+ SGN-E316553- 0.997 787 1.001 C PGS_C08HBa0336I24.1+_SGN-E316553- (16136 16922) Alignment (genomic DNA sequence = upper lines): GATCAATAAT AGTTCCATTG CGATGATTTT GGTTACGTTT CTCATCGTAA AGAGATGATC 16195 |||||||||| |||||||||| |||||| ||| ||||||||| |||||||||| |||||||||| GATCAATAAT AGTTCCATTG CGATGA-TTT AGTTACGTTT CTCATCGTAA AGAGATGATC 59 CCTCACGATC AAACATGGGA GGTATACGCA TGCCTTTTGG ATGATCCCAA TTCCAGTAAG 16255 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCACGATC AAACATGGGA GGTATACGCA TGCCTTTTGG ATGATCCCAA TTCCAGTAAG 119 GTAAAGCAAA AGTTGGATCA TTAATAAGTG ATCCCAAAAT TCTTTCGTAA AAGTACAAGT 16315 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTAAAGCAAA AGTTGGATCA TTAATAAGTG ATCCCAAAAT TCTTTCGTAA AAGTACAAGT 179 ACCATCTATG AAAGGGAAAG AAAAGCCACG AGAAATGAAC TTGCAATTCT TTACCACCAA 16375 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCATCTATG AAAGGGAAAG AAAAGCCACG AGAAATGAAC TTGCAATTCT TTACCACCAA 239 CTTTGTAAGC ACCGTTGCAA TAAGCACAAT GAATATTAGC TTGTTGTTTA AAGCCAAGAG 16435 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTGTAAGC ACCGTTGCAA TAAGCACAAT GAATATTAGC TTGTTGTTTA AAGCCAAGAG 299 GGTCAAAGGG GTCTTTATCA AGTTCCCTCA TTCGACTCGT AGCCAATTGA TACTTGGCTA 16495 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTCAAAGGG GTCTTTATCA AGTTCCCTCA TTCGACTCGT AGCCAATTGA TACTTGGCTA 359 CGTACTCCTC ATCCGCCGCA TGAGCAGGGG GGCGGATGCG GAGTTTAGTC ATAGAAGGGA 16555 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTACTCCTC ATCCGCCGCA TGAGCAGGGG GGCGGATGCG GAGTTTAGTC ATAGAAGGGA 419 ACTTGTAGTA CGGAACACTA TCGATATCAT CGGGTACAGG AGGGCAACAA CTGTATATTA 16615 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTGTAGTA CGGAACACTA TCGATATCAT CGGGTACAGG AGGGCAACAA CTGTATATTA 479 CATCAACACC TTCTTTTACA TGGGCAGTAC CACAAGACTT GAGATCAGGA GGTGGTATAG 16675 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCAACACC TTCTTTTACA TGGGCAGTAC CACAAGACTT GAGATCAGGA GGTGGTATAG 539 GTGCAGCAGT CGCTAATGGT GCAAGATTAG CTGCACCATA AAGACCTCCT AACCCTAAAA 16735 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGCAGCAGT CGCTAATGGT GCAAGATTAG CTGCACCATA AAGACCTCCT AACCCTAAAA 599 GAACGTTTCG TCTATCAACA GCGTCAGGGT TTTTGTCAAC GTTGTTTGCG TTGCATGAAA 16795 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAACGTTTCG TCTATCAACA GCGTCAGGGT TTTTGTCAAC GTTGTTTGCG TTGCATGAAA 659 CCTTGAAACT TTGATTACGC CTTCCGTGGA GGAAAAGTTG AGAGGGTTTT GATAACAAGG 16855 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTGAAACT TTGATTACGC CTTCCGTGGA GGAAAAGTTG AGAGGGTTTT GATAACAAGG 719 ATGAGTTGGT GGTGGTGAAG GAAGAAGAGA GGGATTTGTT GGTGCATAAA GGAAGAGTAG 16915 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGAGTTGGT GGTGGTGAAG GAAGAAGAGA GGGATTTGTT GGTGCATAAA GGAAGAGTAG 779 TAGTAAT 16922 ||||||| TAGTAAT 786 hqPGS_C08HBa0336I24.1+_SGN-E316553- (16136 16922) ******************************************************************************** EST sequence 163 -strand 760 n (File: SGN-E315871-) 1 GATCAATATA GTTTCCATTG CGATGATTTT GGTTACGTTT CTCATCGTAA AGAGATGAAC 61 CCTCACGATC AACATGGGGA GGTATACGCA TACCTTTTGG ATGATCCCAN TTCCAGTAAG 121 GTAAAGCAAA AGTNGGATCA TTAATAAGTG ACCCCAATAT CCTTTCGTAA AAAGTACAAG 181 TACCATCTAT GANNCGGAAG AAAAAGCCAC GAGAAATGAA CTGCAAATCT TACCCACCAA 241 TTTATAAAGC ACCGTTACAA TAAGCACAAT GAATATTAGC TTGTTGTTTA ACCCAAGAGG 301 GGTCAAAAGG GTCTTTATCA AGTTCCCTCA TTCGACTTGT AGCCAATTGA TACTTGGCTA 361 CGTACTCCTC ATCCGCCGCA TGAGCAGGGG GGCGGATGCG GAGTTTCGTC ATAGGAGGGA 421 ACTTGTAGTA CGGAACGCTA TCGATATCAT CAGGTACAGG AGGGCAACAA CTGTATGAGA 481 CTTCAGTACC TTTATCATCT ATATGGGCAA CACCACAAGA TTTGAGATCA GGTGGTGGTA 541 TAGGAGCAGC AGAGGCTAAT GGTGCAAGAT TAGCTGCACC ATAAAAACCT CCTAACCCTA 601 AAAGAACATT TCTCCTATCA ACAGCGTCAA GGTTTTTGTC ATGCTCGCCA ACGTTGCATG 661 AAACCTTGAA ACTTTGACAG CGCCTTCCAT GGAGGAAAGG TTGAGAGGGT TTTGATAAGA 721 AAGTAGAGTG GTTGTTGGTG AAGGGAGAAG AGAGGGATTT Predicted gene structure (within gDNA segment 15418 to 18869): Exon 1 16136 16892 ( 757 n); cDNA 1 760 ( 760 n); score: 0.879 MATCH C08HBa0336I24.1+ SGN-E315871- 0.879 757 0.996 C PGS_C08HBa0336I24.1+_SGN-E315871- (16136 16892) Alignment (genomic DNA sequence = upper lines): GATCAATAAT AGTTCCATTG CGATGATTTT GGTTACGTTT CTCATCGTAA AGAGATGATC 16195 |||||||| |||||||| |||||||||| |||||||||| |||||||||| |||||||| | GATCAATATA GTTTCCATTG CGATGATTTT GGTTACGTTT CTCATCGTAA AGAGATGAAC 60 CCTCACGATC AAACATGGGA GGTATACGCA TGCCTTTTGG ATGATCCCAA TTCCAGTAAG 16255 |||||||||| || |||| |||||||||| | |||||||| ||||||||| |||||||||| CCTCACGATC AACATGGGGA GGTATACGCA TACCTTTTGG ATGATCCCAN TTCCAGTAAG 120 GTAAAGCAAA AGTTGGATCA TTAATAAGTG ATCCCAAAAT TCTTTCGT-A AAAGTACAAG 16314 |||||||||| ||| |||||| |||||||||| | ||||| || ||||||| | |||||||||| GTAAAGCAAA AGTNGGATCA TTAATAAGTG ACCCCAATAT CCTTTCGTAA AAAGTACAAG 180 TACCATCTAT GAAAGGGAAA GAAAAGCCAC GAGAAATGAA CTTGCAATTC TTTACCACCA 16374 |||||||||| || |||| ||||||||| |||||||||| | ||||| || || |||||| TACCATCTAT GANNCGGAAG AAAAAGCCAC GAGAAATGAA C-TGCAAATC TTACCCACCA 239 ACTTTGTAAG CACCGTTGCA ATAAGCACAA TGAATATTAG CTTGTTGTTT AAAGCCAAGA 16434 | || ||| ||||||| || |||||||||| |||||||||| |||||||||| || |||||| ATTTATAAAG CACCGTTACA ATAAGCACAA TGAATATTAG CTTGTTGTTT -AACCCAAGA 298 -GGGTCAAAG GGGTCTTTAT CAAGTTCCCT CATTCGACTC GTAGCCAATT GATACTTGGC 16493 |||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| GGGGTCAAAA GGGTCTTTAT CAAGTTCCCT CATTCGACTT GTAGCCAATT GATACTTGGC 358 TACGTACTCC TCATCCGCCG CATGAGCAGG GGGGCGGATG CGGAGTTTAG TCATAGAAGG 16553 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||||| ||| TACGTACTCC TCATCCGCCG CATGAGCAGG GGGGCGGATG CGGAGTTTCG TCATAGGAGG 418 GAACTTGTAG TACGGAACAC TATCGATATC ATCGGGTACA GGAGGGCAAC AACTGTATAT 16613 |||||||||| |||||||| | |||||||||| ||| |||||| |||||||||| |||||||| GAACTTGTAG TACGGAACGC TATCGATATC ATCAGGTACA GGAGGGCAAC AACTGTATGA 478 TACATCAACA CC--T-TCTT TTACATGGGC AGTACCACAA GACTTGAGAT CAGGAGGTGG 16670 || ||| | || | || | || |||||| | ||||||| || ||||||| |||| ||||| GACTTCAGTA CCTTTATCAT CTATATGGGC AACACCACAA GATTTGAGAT CAGGTGGTGG 538 TATAGGTGCA GCAGTCGCTA ATGGTGCAAG ATTAGCTGCA CCATAAAGAC CTCCTAACCC 16730 |||||| ||| |||| |||| |||||||||| |||||||||| ||||||| || |||||||||| TATAGGAGCA GCAGAGGCTA ATGGTGCAAG ATTAGCTGCA CCATAAAAAC CTCCTAACCC 598 TAAAAGAACG TTTCGTCTAT CAACAGCGTC AGGGTTTTTG TCAACGTTGT TTGCGTTGCA 16790 ||||||||| |||| |||| |||||||||| | |||||||| ||| | | ||||||| TAAAAGAACA TTTCTCCTAT CAACAGCGTC AAGGTTTTTG TCATGCTCGC CAACGTTGCA 658 TGAAACCTTG AAACTTTGAT TACGCCTTCC GTGGAGGAAA AGTTGAGAGG GTTTTGATAA 16850 |||||||||| ||||||||| |||||||| ||||||||| ||||||||| |||||||||| TGAAACCTTG AAACTTTGAC AGCGCCTTCC ATGGAGGAAA GGTTGAGAGG GTTTTGATAA 718 CAAGGATGAG TTGGTGGTGG TGAAGGAAGA AGAGAGGGAT TT 16892 || | ||| | | || ||| |||||| ||| |||||||||| || GAAAGTAGAG TGGTTGTTGG TGAAGGGAGA AGAGAGGGAT TT 760 hqPGS_C08HBa0336I24.1+_SGN-E315871- (16136 16892) ******************************************************************************** EST sequence 202 -strand 795 n (File: SGN-E328643-) 1 CAATAATAGT TCCATTGCGA TGATTTGGTT ACGTTTCTCA TCGTAAAGAG ATGAACCTTC 61 ACGATCAAAC ATGGGAGGTA TACGCATACC TTTGGATGAT CCCAATTCCA GTAAGGTAAA 121 GCAAAAGTTG GATCATTAAT AAGTGACCCC AATATCCTTT CGTAAAAGTA CAAGTACCAT 181 CTATGGAACG GAAAGAAAAG CCACGAGAAA TGAACTTGCA ATTCTTTACC ACCAATTTTA 241 TAAGCACCGT TACAATAAGC ACAATGAATA TTAGCTTGTT GTTTAAACCC AAGAGGGTCA 301 AAAGGGTCTT TATCAAGTTC CCTCATTCGA CTTGTAGCCA ATTGATACTT GGCTACGTAC 361 TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT TCGTCATAGG AGGGAACTTG 421 TAGTACGGAA CGCTATCGAT ATCATCAGGT ACAGGAGGGC AACAACTGTA TGAGACTTCA 481 GTACCTTTAT CATCTATATG GGCAACACCA CAAGATTTGA GATCAGGTGG TGGTATAGGA 541 GCAGCAGAGG CTAATGGTGC AAGATTAGCT GCACCATAAA AACCTCCTAA CCCTAAAAGA 601 ACATTTCTCC TATCAACAGC GTCAAGGTTT TTGTCATGCT CGCCAACGTT GCATGAAACC 661 TTGAAACTTT GACAGCGCCT TCCATGGAGG AAAGGTTGAG AGGGTTTTGA TAAGAAAGTA 721 GAGTGGTTGT TGGTGAAGGG AGAAGAGAGG GATTTGTTGG TGGATAATAA AGGAAGAGTA 781 TTAGGAGTAG AAGAA Predicted gene structure (within gDNA segment 15529 to 19269): Exon 1 16139 16932 ( 794 n); cDNA 1 795 ( 795 n); score: 0.899 MATCH C08HBa0336I24.1+ SGN-E328643- 0.899 794 0.999 C PGS_C08HBa0336I24.1+_SGN-E328643- (16139 16932) Alignment (genomic DNA sequence = upper lines): CAATAATAGT TCCATTGCGA TGATTTTGGT TACGTTTCTC ATCGTAAAGA GATGATCCCT 16198 |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| ||||| || | CAATAATAGT TCCATTGCGA TGA-TTTGGT TACGTTTCTC ATCGTAAAGA GATGAACCTT 59 CACGATCAAA CATGGGAGGT ATACGCATGC CTTTTGGATG ATCCCAATTC CAGTAAGGTA 16258 |||||||||| |||||||||| |||||||| | | |||||||| |||||||||| |||||||||| CACGATCAAA CATGGGAGGT ATACGCATAC C-TTTGGATG ATCCCAATTC CAGTAAGGTA 118 AAGCAAAAGT TGGATCATTA ATAAGTGATC CCAAAATTCT TTCGTAAAAG TACAAGTACC 16318 |||||||||| |||||||||| |||||||| | |||| || || |||||||||| |||||||||| AAGCAAAAGT TGGATCATTA ATAAGTGACC CCAATATCCT TTCGTAAAAG TACAAGTACC 178 ATCTATGAAA GGGAAAGAAA AGCCACGAGA AATGAACTTG CAATTCTTTA CCACCAACTT 16378 ||||||| || ||||||||| |||||||||| |||||||||| |||||||||| ||||||| || ATCTATGGAA CGGAAAGAAA AGCCACGAGA AATGAACTTG CAATTCTTTA CCACCAATTT 238 TGTAAGCACC GTTGCAATAA GCACAATGAA TATTAGCTTG TTGTTTAAAG CCAAGAGGGT 16438 | |||||||| ||| |||||| |||||||||| |||||||||| ||||||||| |||||||||| TATAAGCACC GTTACAATAA GCACAATGAA TATTAGCTTG TTGTTTAAAC CCAAGAGGGT 298 CAAAGGGGTC TTTATCAAGT TCCCTCATTC GACTCGTAGC CAATTGATAC TTGGCTACGT 16498 |||| ||||| |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| CAAAAGGGTC TTTATCAAGT TCCCTCATTC GACTTGTAGC CAATTGATAC TTGGCTACGT 358 ACTCCTCATC CGCCGCATGA GCAGGGGGGC GGATGCGGAG TTTAGTCATA GAAGGGAACT 16558 |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| | |||||||| ACTCCTCATC CGCCGCATGA GCAGGGGGGC GGATGCGGAG TTTCGTCATA GGAGGGAACT 418 TGTAGTACGG AACACTATCG ATATCATCGG GTACAGGAGG GCAACAACTG TATATTACAT 16618 |||||||||| ||| |||||| |||||||| | |||||||||| |||||||||| ||| || | TGTAGTACGG AACGCTATCG ATATCATCAG GTACAGGAGG GCAACAACTG TATGAGACTT 478 CAACACC--T -TCTTTTACA TGGGCAGTAC CACAAGACTT GAGATCAGGA GGTGGTATAG 16675 || ||| | || | || | |||||| || ||||||| || ||||||||| |||||||||| CAGTACCTTT ATCATCTATA TGGGCAACAC CACAAGATTT GAGATCAGGT GGTGGTATAG 538 GTGCAGCAGT CGCTAATGGT GCAAGATTAG CTGCACCATA AAGACCTCCT AACCCTAAAA 16735 | ||||||| ||||||||| |||||||||| |||||||||| || ||||||| |||||||||| GAGCAGCAGA GGCTAATGGT GCAAGATTAG CTGCACCATA AAAACCTCCT AACCCTAAAA 598 GAACGTTTCG TCTATCAACA GCGTCAGGGT TTTTGTCAAC GTTGTTTGCG TTGCATGAAA 16795 |||| |||| ||||||||| |||||| ||| |||||||| | | || |||||||||| GAACATTTCT CCTATCAACA GCGTCAAGGT TTTTGTCATG CTCGCCAACG TTGCATGAAA 658 CCTTGAAACT TTGATTACGC CTTCCGTGGA GGAAAAGTTG AGAGGGTTTT GATAACAAGG 16855 |||||||||| |||| ||| ||||| |||| ||||| |||| |||||||||| ||||| || | CCTTGAAACT TTGACAGCGC CTTCCATGGA GGAAAGGTTG AGAGGGTTTT GATAAGAAAG 718 ATGAGTTGGT GGTGGTGAAG GAAGAAGAGA GGGATTTGTT GGTGCATAAA GGAAGAGTAG 16915 |||| | | | |||||||| | |||||||| |||||||||| |||| |||| | || || TAGAGTGGTT GTTGGTGAAG GGAGAAGAGA GGGATTTGTT GGTGGATAAT AAAGGAAGAG 778 TAGTAATAGA AGAAGAA 16932 || || || ||||||| TATTAGGAGT AGAAGAA 795 hqPGS_C08HBa0336I24.1+_SGN-E328643- (16139 16932) ******************************************************************************** EST sequence 92 -strand 533 n (File: SGN-E314737-) 1 AATAATAGTT CCATTGCGAT GATTTTGGTT ACGTTTCTCA TCGTAAAGAG ATGAACCCTC 61 ACGATCAAAC ATGGGAGGTA TACGCATACC TTTTGGATGA TCCCAATTCC AGTAAGGTAA 121 AGCAAAAGTT GGATCATTAA TAAGTGACCC CAATATCCTT TCGTAAAAGT ACAAGTACCA 181 TCTATGGAAC GGAAAGAAAA GCCACGAGAA ATGAACTTGC AATTCTTTAC CACCAATTTT 241 ATAAGCACCG TTACAATAAG CACAATGAAT ATTAGCTTGT TGTTTAAACC CAAGAGGGTC 301 AAAAGGGTCT TTATCAAGTT CCCTCATTCG ACTTGTAGCC AATTGATACT TGGCTACGTA 361 CTCCTCATCC GCCGCATGAG CAGGGGGGCG GATGCGGAGT TTCGTCATAG GAGGGAACTT 421 GTAGTACGGA ACGCTATCGA TATCATCAGG TACAGGAGGG CAACAACTGT ATGAGACTTC 481 AGTACCTTTA TCATCTATAT GGGCAACACC ACAAGATTTG AGATCAGGTG GTG Predicted gene structure (within gDNA segment 15530 to 17821): Exon 1 16140 16669 ( 530 n); cDNA 1 533 ( 533 n); score: 0.929 MATCH C08HBa0336I24.1+ SGN-E314737- 0.929 530 0.994 C PGS_C08HBa0336I24.1+_SGN-E314737- (16140 16669) Alignment (genomic DNA sequence = upper lines): AATAATAGTT CCATTGCGAT GATTTTGGTT ACGTTTCTCA TCGTAAAGAG ATGATCCCTC 16199 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| AATAATAGTT CCATTGCGAT GATTTTGGTT ACGTTTCTCA TCGTAAAGAG ATGAACCCTC 60 ACGATCAAAC ATGGGAGGTA TACGCATGCC TTTTGGATGA TCCCAATTCC AGTAAGGTAA 16259 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| ACGATCAAAC ATGGGAGGTA TACGCATACC TTTTGGATGA TCCCAATTCC AGTAAGGTAA 120 AGCAAAAGTT GGATCATTAA TAAGTGATCC CAAAATTCTT TCGTAAAAGT ACAAGTACCA 16319 |||||||||| |||||||||| ||||||| || ||| || ||| |||||||||| |||||||||| AGCAAAAGTT GGATCATTAA TAAGTGACCC CAATATCCTT TCGTAAAAGT ACAAGTACCA 180 TCTATGAAAG GGAAAGAAAA GCCACGAGAA ATGAACTTGC AATTCTTTAC CACCAACTTT 16379 |||||| || |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| TCTATGGAAC GGAAAGAAAA GCCACGAGAA ATGAACTTGC AATTCTTTAC CACCAATTTT 240 GTAAGCACCG TTGCAATAAG CACAATGAAT ATTAGCTTGT TGTTTAAAGC CAAGAGGGTC 16439 ||||||||| || ||||||| |||||||||| |||||||||| |||||||| | |||||||||| ATAAGCACCG TTACAATAAG CACAATGAAT ATTAGCTTGT TGTTTAAACC CAAGAGGGTC 300 AAAGGGGTCT TTATCAAGTT CCCTCATTCG ACTCGTAGCC AATTGATACT TGGCTACGTA 16499 ||| |||||| |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| AAAAGGGTCT TTATCAAGTT CCCTCATTCG ACTTGTAGCC AATTGATACT TGGCTACGTA 360 CTCCTCATCC GCCGCATGAG CAGGGGGGCG GATGCGGAGT TTAGTCATAG AAGGGAACTT 16559 |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| ||||||||| CTCCTCATCC GCCGCATGAG CAGGGGGGCG GATGCGGAGT TTCGTCATAG GAGGGAACTT 420 GTAGTACGGA ACACTATCGA TATCATCGGG TACAGGAGGG CAACAACTGT ATATTACATC 16619 |||||||||| || ||||||| ||||||| || |||||||||| |||||||||| || || || GTAGTACGGA ACGCTATCGA TATCATCAGG TACAGGAGGG CAACAACTGT ATGAGACTTC 480 AACACC--T- TCTTTTACAT GGGCAGTACC ACAAGACTTG AGATCAGGAG GTG 16669 | ||| | || | || || ||||| ||| |||||| ||| |||||||| | ||| AGTACCTTTA TCATCTATAT GGGCAACACC ACAAGATTTG AGATCAGGTG GTG 533 hqPGS_C08HBa0336I24.1+_SGN-E314737- (16140 16669) ******************************************************************************** EST sequence 169 -strand 768 n (File: SGN-E315745-) 1 TAGTTCCATT GCGATGATTT TGTTACGTTT CTCATCGTAA AGAGATGAAC CTTCACGATC 61 AAAACATGGG AGGTATACGC ATACCTTTTG GATGATCCCA ATTCCCAGTA AGGTAAAGCA 121 AAAGTTGGAT CATTAATAAG TGACCCCAAT ATCCTTTCGT AAAAGTACAA GTACCATCTA 181 TGGAACGGAA AGAAAAGCCA CGAGAAATGA ACTTGCAATT CTTTACCACC AATTTTATAA 241 GCACCGTTAC AATAAGCACA ATGAATATTA GCTTGTTGTT TAAACCCAAG AGGGTCAAAA 301 GGGTCTTTAT CAAGTTCCCT CATTCGACTT GTAGCCAATT GATACTTGGC TACGTACTCC 361 TCATCCGCCG CATGAGCAGG GGGGCGGATG CGGAGTTTCG TCATAGGAGG GAACTTGTAG 421 TACGGAACGC TATCGATATC ATCAGGTACA GGAGGGCAAC AACTGTATGA GACTTCAGTA 481 CCTTTATCAT CTATATGGGC AACACCACAA GATTTGAGAT CAGGTGGTGG TATAGGAGCA 541 GCAGAGGCTA ATGGTGCAAG ATTAGCTGCA CCATAAAAAC CTCCTAACCC TAAAAGAACA 601 TTTCTCCTAT CAACAGCGTC AAGGTTTTTG TCATGCTCGC CAACGTTGCA TGAAACCTTG 661 AAACTTTGAC AGCGCCTTCC ATGGAGGAAA GGTTGAGAGG GTTTTGATAA GAAAGTAGAG 721 TGGTTGTTGG TGAAGGGAGA AGAGAGGGAT TTGTTGGTGG ATAATAAA Predicted gene structure (within gDNA segment 15535 to 19029): Exon 1 16145 16904 ( 760 n); cDNA 1 764 ( 764 n); score: 0.902 MATCH C08HBa0336I24.1+ SGN-E315745- 0.902 760 0.990 C PGS_C08HBa0336I24.1+_SGN-E315745- (16145 16904) Alignment (genomic DNA sequence = upper lines): TAGTTCCATT GCGATGATTT TGGTTACGTT TCTCATCGTA AAGAGATGAT CCCTCACGAT 16204 |||||||||| |||||||||| | |||||||| |||||||||| ||||||||| || ||||||| TAGTTCCATT GCGATGATTT T-GTTACGTT TCTCATCGTA AAGAGATGAA CCTTCACGAT 59 C-AAACATGG GAGGTATACG CATGCCTTTT GGATGATCCC AATT-CCAGT AAGGTAAAGC 16262 | |||||||| |||||||||| ||| |||||| |||||||||| |||| ||||| |||||||||| CAAAACATGG GAGGTATACG CATACCTTTT GGATGATCCC AATTCCCAGT AAGGTAAAGC 119 AAAAGTTGGA TCATTAATAA GTGATCCCAA AATTCTTTCG TAAAAGTACA AGTACCATCT 16322 |||||||||| |||||||||| |||| ||||| || |||||| |||||||||| |||||||||| AAAAGTTGGA TCATTAATAA GTGACCCCAA TATCCTTTCG TAAAAGTACA AGTACCATCT 179 ATGAAAGGGA AAGAAAAGCC ACGAGAAATG AACTTGCAAT TCTTTACCAC CAACTTTGTA 16382 ||| || ||| |||||||||| |||||||||| |||||||||| |||||||||| ||| ||| || ATGGAACGGA AAGAAAAGCC ACGAGAAATG AACTTGCAAT TCTTTACCAC CAATTTTATA 239 AGCACCGTTG CAATAAGCAC AATGAATATT AGCTTGTTGT TTAAAGCCAA GAGGGTCAAA 16442 ||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| AGCACCGTTA CAATAAGCAC AATGAATATT AGCTTGTTGT TTAAACCCAA GAGGGTCAAA 299 GGGGTCTTTA TCAAGTTCCC TCATTCGACT CGTAGCCAAT TGATACTTGG CTACGTACTC 16502 ||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| AGGGTCTTTA TCAAGTTCCC TCATTCGACT TGTAGCCAAT TGATACTTGG CTACGTACTC 359 CTCATCCGCC GCATGAGCAG GGGGGCGGAT GCGGAGTTTA GTCATAGAAG GGAACTTGTA 16562 |||||||||| |||||||||| |||||||||| ||||||||| ||||||| || |||||||||| CTCATCCGCC GCATGAGCAG GGGGGCGGAT GCGGAGTTTC GTCATAGGAG GGAACTTGTA 419 GTACGGAACA CTATCGATAT CATCGGGTAC AGGAGGGCAA CAACTGTATA TTACATCAAC 16622 ||||||||| |||||||||| |||| ||||| |||||||||| ||||||||| || ||| GTACGGAACG CTATCGATAT CATCAGGTAC AGGAGGGCAA CAACTGTATG AGACTTCAGT 479 ACC--T-TCT TTTACATGGG CAGTACCACA AGACTTGAGA TCAGGAGGTG GTATAGGTGC 16679 ||| | || | || ||||| || |||||| ||| |||||| ||||| |||| ||||||| || ACCTTTATCA TCTATATGGG CAACACCACA AGATTTGAGA TCAGGTGGTG GTATAGGAGC 539 AGCAGTCGCT AATGGTGCAA GATTAGCTGC ACCATAAAGA CCTCCTAACC CTAAAAGAAC 16739 ||||| ||| |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| AGCAGAGGCT AATGGTGCAA GATTAGCTGC ACCATAAAAA CCTCCTAACC CTAAAAGAAC 599 GTTTCGTCTA TCAACAGCGT CAGGGTTTTT GTCAACGTTG TTTGCGTTGC ATGAAACCTT 16799 |||| ||| |||||||||| || ||||||| |||| | | |||||| |||||||||| ATTTCTCCTA TCAACAGCGT CAAGGTTTTT GTCATGCTCG CCAACGTTGC ATGAAACCTT 659 GAAACTTTGA TTACGCCTTC CGTGGAGGAA AAGTTGAGAG GGTTTTGATA ACAAGGATGA 16859 |||||||||| ||||||| | |||||||| | |||||||| |||||||||| | || | || GAAACTTTGA CAGCGCCTTC CATGGAGGAA AGGTTGAGAG GGTTTTGATA AGAAAGTAGA 719 GTTGGTGGTG GTGAAGGAAG AAGAGAGGGA TTTGTTGGTG CATAA 16904 || | || || ||||||| || |||||||||| |||||||||| |||| GTGGTTGTTG GTGAAGGGAG AAGAGAGGGA TTTGTTGGTG GATAA 764 hqPGS_C08HBa0336I24.1+_SGN-E315745- (16145 16904) ******************************************************************************** EST sequence 144 -strand 785 n (File: SGN-E315354-) 1 AGTTCCATTG CGATGATTTG GGTTACGTTT CTCATCGTAA AGAGATGAAC CCTCACGATC 61 AAACATGGGA GGTATACGCA TACCTTTTGG ATGATCCCAT TTCCAGTAAG GTAAAGCAAA 121 AGTTGGATCA TTAATAAGTG ACCCCAATAT CCTTTCGTAA AAGTACAAGT ACCATCTATG 181 GAACGGAAAG AAAAGCCACG AGAAATGAAC TTGCAATTCT TTACCACCAA TTTTATAAGC 241 ACCGTTACAA TAAGCACAAT GAATATTAGC TTGTTGTTTA AACCCAAGAG GGTCAAAAGG 301 GTCTTTATCA AGTTCCCTCA TTCGACTTGT AGCCAATTGA TACTTGGCTA CGTACTCCTC 361 ATCCGCCGCA TGAGCAGGGG GGCGGATGCG GAGTTTCGTC ATAGGAGGGA ACTTGTAGTA 421 CGGAACGCTA TCGATATCAT CAGGTACAGG AGGGCAACAA CTGTATGAGA CTTCAGTACC 481 TTTATCATCT ATATGGGCAA CACCACAAGA TTTGAGATCA GGTGGTGGTA TAGGAGCAGC 541 AGAGGCTAAT GGTGCAAGAT TAGCTGCACC ATAAAAACCT CCTAACCCTA AAAGAACATT 601 TCTCCTATCA ACAGCGTCAA GGTTTTTGTC ATGCTCGCCA ACGTTGCATG AAACCTTGAA 661 ACTTTGACAG CGCCTTCCAT GGAGGAAAGG TTGAGAGGGT TTTGATAAGA AAGTAGAGTG 721 GTTGTTGGTG AAGGGAGAAG AGAGGGATTT GTTGGTGGAT AATAAAGGAA GAGTATTAGG 781 AGTAG Predicted gene structure (within gDNA segment 15536 to 19219): Exon 1 16146 16927 ( 782 n); cDNA 1 785 ( 785 n); score: 0.898 MATCH C08HBa0336I24.1+ SGN-E315354- 0.898 782 0.996 C PGS_C08HBa0336I24.1+_SGN-E315354- (16146 16927) Alignment (genomic DNA sequence = upper lines): AGTTCCATTG CGATGATTTT GGTTACGTTT CTCATCGTAA AGAGATGATC CCTCACGATC 16205 |||||||||| ||||||||| |||||||||| |||||||||| |||||||| | |||||||||| AGTTCCATTG CGATGATTTG GGTTACGTTT CTCATCGTAA AGAGATGAAC CCTCACGATC 60 AAACATGGGA GGTATACGCA TGCCTTTTGG ATGATCCCAA TTCCAGTAAG GTAAAGCAAA 16265 |||||||||| |||||||||| | |||||||| ||||||||| |||||||||| |||||||||| AAACATGGGA GGTATACGCA TACCTTTTGG ATGATCCCAT TTCCAGTAAG GTAAAGCAAA 120 AGTTGGATCA TTAATAAGTG ATCCCAAAAT TCTTTCGTAA AAGTACAAGT ACCATCTATG 16325 |||||||||| |||||||||| | ||||| || ||||||||| |||||||||| |||||||||| AGTTGGATCA TTAATAAGTG ACCCCAATAT CCTTTCGTAA AAGTACAAGT ACCATCTATG 180 AAAGGGAAAG AAAAGCCACG AGAAATGAAC TTGCAATTCT TTACCACCAA CTTTGTAAGC 16385 || |||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| ||||| GAACGGAAAG AAAAGCCACG AGAAATGAAC TTGCAATTCT TTACCACCAA TTTTATAAGC 240 ACCGTTGCAA TAAGCACAAT GAATATTAGC TTGTTGTTTA AAGCCAAGAG GGTCAAAGGG 16445 |||||| ||| |||||||||| |||||||||| |||||||||| || ||||||| ||||||| || ACCGTTACAA TAAGCACAAT GAATATTAGC TTGTTGTTTA AACCCAAGAG GGTCAAAAGG 300 GTCTTTATCA AGTTCCCTCA TTCGACTCGT AGCCAATTGA TACTTGGCTA CGTACTCCTC 16505 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| GTCTTTATCA AGTTCCCTCA TTCGACTTGT AGCCAATTGA TACTTGGCTA CGTACTCCTC 360 ATCCGCCGCA TGAGCAGGGG GGCGGATGCG GAGTTTAGTC ATAGAAGGGA ACTTGTAGTA 16565 |||||||||| |||||||||| |||||||||| |||||| ||| |||| ||||| |||||||||| ATCCGCCGCA TGAGCAGGGG GGCGGATGCG GAGTTTCGTC ATAGGAGGGA ACTTGTAGTA 420 CGGAACACTA TCGATATCAT CGGGTACAGG AGGGCAACAA CTGTATATTA CATCAACACC 16625 |||||| ||| |||||||||| | |||||||| |||||||||| |||||| | | ||| ||| CGGAACGCTA TCGATATCAT CAGGTACAGG AGGGCAACAA CTGTATGAGA CTTCAGTACC 480 --T-TCTTTT ACATGGGCAG TACCACAAGA CTTGAGATCA GGAGGTGGTA TAGGTGCAGC 16682 | || | | | ||||||| ||||||||| ||||||||| || ||||||| |||| ||||| TTTATCATCT ATATGGGCAA CACCACAAGA TTTGAGATCA GGTGGTGGTA TAGGAGCAGC 540 AGTCGCTAAT GGTGCAAGAT TAGCTGCACC ATAAAGACCT CCTAACCCTA AAAGAACGTT 16742 || |||||| |||||||||| |||||||||| ||||| |||| |||||||||| ||||||| || AGAGGCTAAT GGTGCAAGAT TAGCTGCACC ATAAAAACCT CCTAACCCTA AAAGAACATT 600 TCGTCTATCA ACAGCGTCAG GGTTTTTGTC AACGTTGTTT GCGTTGCATG AAACCTTGAA 16802 || |||||| ||||||||| |||||||||| | | | ||||||||| |||||||||| TCTCCTATCA ACAGCGTCAA GGTTTTTGTC ATGCTCGCCA ACGTTGCATG AAACCTTGAA 660 ACTTTGATTA CGCCTTCCGT GGAGGAAAAG TTGAGAGGGT TTTGATAACA AGGATGAGTT 16862 ||||||| |||||||| | |||||||| | |||||||||| |||||||| | | | |||| ACTTTGACAG CGCCTTCCAT GGAGGAAAGG TTGAGAGGGT TTTGATAAGA AAGTAGAGTG 720 GGTGGTGGTG AAGGAAGAAG AGAGGGATTT GTTGGTGCAT AAAGGAAGAG TAGTAGTAAT 16922 | || ||||| |||| ||||| |||||||||| ||||||| || || | || |||| || GTTGTTGGTG AAGGGAGAAG AGAGGGATTT GTTGGTGGAT AATAAAGGAA GAGTATTAGG 780 AGAAG 16927 || || AGTAG 785 hqPGS_C08HBa0336I24.1+_SGN-E315354- (16146 16927) ******************************************************************************** EST sequence 187 -strand 746 n (File: SGN-E327936-) 1 TCCATTGCGA TGATTTTGGT ACGTTTCTCA TCGTAAAGAG ATGACCCTTC ACGATCAAAC 61 ATGGGAGGTA TACGCATACC TNNTGGATGA TCCCAATTCC AGTAAGGTAA AGCAAAAGTT 121 GGATCATTAA TAAGTGACCC CAATATCCTT TCGTAAAAGT ACAAGTACCA TCTATGGAAC 181 GGAAAGAAAA GCCACGAGAA ATGAACTTGC AATTCTTTAC CACCAATTTT ATAAGCACCG 241 TTACAATAAG CACAATGAAT ATTAGCTTGT TGTTTAAACC CAAGAGGGTC AAAAGGGTCT 301 TTATCAAGTT CCCTCATTCG ACTTGTAGCC AATTGATACT TGGCTACGTA CTCCTCATCC 361 GCCGCATGAG CAGGGGGGCG GATGCGGAGT TTCGTCATAG GAGGGAACTT GTAGTACGGA 421 ACGCTATCGA TATCATCAGG TACAGGAGGG CAACAACTGT ATGAGACTTC AGTACCTTTA 481 TCATCTATAT GGGCAACACC ACAAGATTTG AGATCAGGTG GTGGTATAGG AGCAGCAGAG 541 GCTAATGGTG CAAGATTAGC TGCACCATAA AAACCTCCTA ACCCTAAAAG AACATTTCTC 601 CTATCAACAG CGTCAAGGTT TTTGTCATGC TCGCCAACGT TGCATGAAAC CTTGAAACTT 661 TGACAGCGCC TTCCATGGAG GAAAGGTTGA GAGGGTTTTG ATAAGAAAGT AGAGTGGTTG 721 TTGGTGAAGG GAGAAGAGAG GGATTT Predicted gene structure (within gDNA segment 15539 to 18869): Exon 1 16149 16892 ( 744 n); cDNA 1 746 ( 746 n); score: 0.905 MATCH C08HBa0336I24.1+ SGN-E327936- 0.905 744 0.997 C PGS_C08HBa0336I24.1+_SGN-E327936- (16149 16892) Alignment (genomic DNA sequence = upper lines): TCCATTGCGA TGATTTTGGT TACGTTTCTC ATCGTAAAGA GATGATCCCT CACGATCAAA 16208 |||||||||| ||||||||| |||||||||| |||||||||| ||||| || | |||||||||| TCCATTGCGA TGATTTTGG- TACGTTTCTC ATCGTAAAGA GATGACCCTT CACGATCAAA 59 CATGGGAGGT ATACGCATGC CTTTTGGATG ATCCCAATTC CAGTAAGGTA AAGCAAAAGT 16268 |||||||||| |||||||| | || |||||| |||||||||| |||||||||| |||||||||| CATGGGAGGT ATACGCATAC CTNNTGGATG ATCCCAATTC CAGTAAGGTA AAGCAAAAGT 119 TGGATCATTA ATAAGTGATC CCAAAATTCT TTCGTAAAAG TACAAGTACC ATCTATGAAA 16328 |||||||||| |||||||| | |||| || || |||||||||| |||||||||| ||||||| || TGGATCATTA ATAAGTGACC CCAATATCCT TTCGTAAAAG TACAAGTACC ATCTATGGAA 179 GGGAAAGAAA AGCCACGAGA AATGAACTTG CAATTCTTTA CCACCAACTT TGTAAGCACC 16388 ||||||||| |||||||||| |||||||||| |||||||||| ||||||| || | |||||||| CGGAAAGAAA AGCCACGAGA AATGAACTTG CAATTCTTTA CCACCAATTT TATAAGCACC 239 GTTGCAATAA GCACAATGAA TATTAGCTTG TTGTTTAAAG CCAAGAGGGT CAAAGGGGTC 16448 ||| |||||| |||||||||| |||||||||| ||||||||| |||||||||| |||| ||||| GTTACAATAA GCACAATGAA TATTAGCTTG TTGTTTAAAC CCAAGAGGGT CAAAAGGGTC 299 TTTATCAAGT TCCCTCATTC GACTCGTAGC CAATTGATAC TTGGCTACGT ACTCCTCATC 16508 |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| TTTATCAAGT TCCCTCATTC GACTTGTAGC CAATTGATAC TTGGCTACGT ACTCCTCATC 359 CGCCGCATGA GCAGGGGGGC GGATGCGGAG TTTAGTCATA GAAGGGAACT TGTAGTACGG 16568 |||||||||| |||||||||| |||||||||| ||| |||||| | |||||||| |||||||||| CGCCGCATGA GCAGGGGGGC GGATGCGGAG TTTCGTCATA GGAGGGAACT TGTAGTACGG 419 AACACTATCG ATATCATCGG GTACAGGAGG GCAACAACTG TATATTACAT CAACACC--T 16626 ||| |||||| |||||||| | |||||||||| |||||||||| ||| || | || ||| | AACGCTATCG ATATCATCAG GTACAGGAGG GCAACAACTG TATGAGACTT CAGTACCTTT 479 -TCTTTTACA TGGGCAGTAC CACAAGACTT GAGATCAGGA GGTGGTATAG GTGCAGCAGT 16685 || | || | |||||| || ||||||| || ||||||||| |||||||||| | ||||||| ATCATCTATA TGGGCAACAC CACAAGATTT GAGATCAGGT GGTGGTATAG GAGCAGCAGA 539 CGCTAATGGT GCAAGATTAG CTGCACCATA AAGACCTCCT AACCCTAAAA GAACGTTTCG 16745 ||||||||| |||||||||| |||||||||| || ||||||| |||||||||| |||| |||| GGCTAATGGT GCAAGATTAG CTGCACCATA AAAACCTCCT AACCCTAAAA GAACATTTCT 599 TCTATCAACA GCGTCAGGGT TTTTGTCAAC GTTGTTTGCG TTGCATGAAA CCTTGAAACT 16805 ||||||||| |||||| ||| |||||||| | | || |||||||||| |||||||||| CCTATCAACA GCGTCAAGGT TTTTGTCATG CTCGCCAACG TTGCATGAAA CCTTGAAACT 659 TTGATTACGC CTTCCGTGGA GGAAAAGTTG AGAGGGTTTT GATAACAAGG ATGAGTTGGT 16865 |||| ||| ||||| |||| ||||| |||| |||||||||| ||||| || | |||| | | TTGACAGCGC CTTCCATGGA GGAAAGGTTG AGAGGGTTTT GATAAGAAAG TAGAGTGGTT 719 GGTGGTGAAG GAAGAAGAGA GGGATTT 16892 | |||||||| | |||||||| ||||||| GTTGGTGAAG GGAGAAGAGA GGGATTT 746 hqPGS_C08HBa0336I24.1+_SGN-E327936- (16149 16892) ******************************************************************************** EST sequence 141 -strand 781 n (File: SGN-E315203-) 1 ATTGCGATGA TTTTGGTTAC GTTTCTCATC GTAAAGAGAT GAACCCTCAC GATCAACATG 61 GGGAGGTATA CGCATACCTT TTGGATGATC CCAATTCCAG TAAGGTAAAG CAAAAGTTGG 121 ATCATTAATA AGTGACCCCA ATATCCTTTC GTAAAAGTAC AAGTACCATC TATGGAACGG 181 AAAGAAAAGC CACGAGAAAT GAACTTGCAA TTCTTTACCA CCAATTTTAT AAGCACCGTT 241 ACAATAAGCA CAATGAATAT TAGCTTGTTG TTTAAACCCA AGAGGGTCAA AAGGGTCTTT 301 ATCAAGTTCC CTCATTCGAC TTGTAGCCAA TTGATACTTG GCTACGTACT CCTCATCCGC 361 CGCATGAGCA GGGGGGCGGA TGCGGAGTTT CGTCATAGGA GGGAACTTGT AGTACGGAAC 421 GCTATCGATA TCATCAGGTA CAGGAGGGCA ACAACTGTAT GAGACTTCAG TACCTTTATC 481 ATCTATATGG GCAACACCAC AAGATTTGAG ATCAGGTGGT GGTATAGGAG CAGCAGAGGC 541 TAATGGTGCA AGATTAGCTG CACCATAAAA ACCTCCTAAC CCTAAAAGAA CATTTCTCCT 601 ATCAACAGCG TCAAGGTTTT TGTCATGCTC GCCAACGTTG CATGAAACCT TGAAACTTTG 661 ACAGCGCCTT CCATGGAGGA AAGGTTGAGA GGGTTTTGAT AAGAAAGTAG AGTGGTTGTT 721 GGTGAAGGGA GAAGAGAGGG ATTTGTTGGT GGATAATAAA GGAAGAGTAT TAGGAGTAGA 781 A Predicted gene structure (within gDNA segment 15542 to 19239): Exon 1 16152 16929 ( 778 n); cDNA 1 781 ( 781 n); score: 0.895 MATCH C08HBa0336I24.1+ SGN-E315203- 0.895 778 0.996 C PGS_C08HBa0336I24.1+_SGN-E315203- (16152 16929) Alignment (genomic DNA sequence = upper lines): ATTGCGATGA TTTTGGTTAC GTTTCTCATC GTAAAGAGAT GATCCCTCAC GATCAAACAT 16211 |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| |||||| ATTGCGATGA TTTTGGTTAC GTTTCTCATC GTAAAGAGAT GAACCCTCAC GATCAACATG 60 GGGAGGTATA CGCATGCCTT TTGGATGATC CCAATTCCAG TAAGGTAAAG CAAAAGTTGG 16271 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| GGGAGGTATA CGCATACCTT TTGGATGATC CCAATTCCAG TAAGGTAAAG CAAAAGTTGG 120 ATCATTAATA AGTGATCCCA AAATTCTTTC GTAAAAGTAC AAGTACCATC TATGAAAGGG 16331 |||||||||| ||||| |||| | || ||||| |||||||||| |||||||||| |||| || || ATCATTAATA AGTGACCCCA ATATCCTTTC GTAAAAGTAC AAGTACCATC TATGGAACGG 180 AAAGAAAAGC CACGAGAAAT GAACTTGCAA TTCTTTACCA CCAACTTTGT AAGCACCGTT 16391 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||| | |||||||||| AAAGAAAAGC CACGAGAAAT GAACTTGCAA TTCTTTACCA CCAATTTTAT AAGCACCGTT 240 GCAATAAGCA CAATGAATAT TAGCTTGTTG TTTAAAGCCA AGAGGGTCAA AGGGGTCTTT 16451 ||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| | |||||||| ACAATAAGCA CAATGAATAT TAGCTTGTTG TTTAAACCCA AGAGGGTCAA AAGGGTCTTT 300 ATCAAGTTCC CTCATTCGAC TCGTAGCCAA TTGATACTTG GCTACGTACT CCTCATCCGC 16511 |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| ATCAAGTTCC CTCATTCGAC TTGTAGCCAA TTGATACTTG GCTACGTACT CCTCATCCGC 360 CGCATGAGCA GGGGGGCGGA TGCGGAGTTT AGTCATAGAA GGGAACTTGT AGTACGGAAC 16571 |||||||||| |||||||||| |||||||||| ||||||| | |||||||||| |||||||||| CGCATGAGCA GGGGGGCGGA TGCGGAGTTT CGTCATAGGA GGGAACTTGT AGTACGGAAC 420 ACTATCGATA TCATCGGGTA CAGGAGGGCA ACAACTGTAT ATTACATCAA CACC--T-TC 16628 ||||||||| ||||| |||| |||||||||| |||||||||| || ||| ||| | || GCTATCGATA TCATCAGGTA CAGGAGGGCA ACAACTGTAT GAGACTTCAG TACCTTTATC 480 TTTTACATGG GCAGTACCAC AAGACTTGAG ATCAGGAGGT GGTATAGGTG CAGCAGTCGC 16688 | || |||| ||| ||||| |||| ||||| |||||| ||| |||||||| | |||||| || ATCTATATGG GCAACACCAC AAGATTTGAG ATCAGGTGGT GGTATAGGAG CAGCAGAGGC 540 TAATGGTGCA AGATTAGCTG CACCATAAAG ACCTCCTAAC CCTAAAAGAA CGTTTCGTCT 16748 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| | |||| || TAATGGTGCA AGATTAGCTG CACCATAAAA ACCTCCTAAC CCTAAAAGAA CATTTCTCCT 600 ATCAACAGCG TCAGGGTTTT TGTCAACGTT GTTTGCGTTG CATGAAACCT TGAAACTTTG 16808 |||||||||| ||| |||||| ||||| | | ||||| |||||||||| |||||||||| ATCAACAGCG TCAAGGTTTT TGTCATGCTC GCCAACGTTG CATGAAACCT TGAAACTTTG 660 ATTACGCCTT CCGTGGAGGA AAAGTTGAGA GGGTTTTGAT AACAAGGATG AGTTGGTGGT 16868 | |||||| || ||||||| || ||||||| |||||||||| || || | | ||| | || | ACAGCGCCTT CCATGGAGGA AAGGTTGAGA GGGTTTTGAT AAGAAAGTAG AGTGGTTGTT 720 GGTGAAGGAA GAAGAGAGGG ATTTGTTGGT GCATAAAGGA AGAGTAGTAG TAATAGAAGA 16928 |||||||| | |||||||||| |||||||||| | |||| | || |||| || || ||| GGTGAAGGGA GAAGAGAGGG ATTTGTTGGT GGATAATAAA GGAAGAGTAT TAGGAGTAGA 780 A 16929 | A 781 hqPGS_C08HBa0336I24.1+_SGN-E315203- (16152 16929) ******************************************************************************** EST sequence 159 -strand 780 n (File: SGN-E327650-) 1 ATGATTTGGT TACGTTTCTC ATCGTAAAGA GATGAACCCT CACGATCAAA CATGGGAGGT 61 ATACGCATAC CTTTGGATGA TCCCAATTCC AGTAAGGTAA AGCAAAAGTT GGATCATTAA 121 TAAGTGACCC CAATATCCTT TCGTAAAAGT ACAAGTACCA TCTATGGAAC GGAAAGAAAA 181 GCCACGAGAA ATGAACTTGC AATTCTTTAC CACCAATTTT ATAAGCACCG TTACAATAAG 241 CACAATGAAT ATTAGCTTGT TGTTTAAACC CAAGAGGGTC AAAAGGGTCT TTATCAAGTT 301 CCCTCATTCG ACTTGTAGCC AATTGATACT TGGCTACGTA CTCCTCATCC GCCGCATGAG 361 CAGGGGGGCG GATGCGGAGT TTCGTCATAG GAGGGAACTT GTAGTACGGA ACGCTATCGA 421 TATCATCAGG TACAGGAGGG CAACAACTGT ATGAGACTTC AGTACCTTTA TCATCTATAT 481 GGGCAACACC ACAAGATTTG AGATCAGGTG GTGGTATAGG AGCAGCAGAG GCTAATGGTG 541 CAAGATTAGC TGCACCATAA AAACCTCCTA ACCCTAAAAG AACATTTCTC CTATCAACAG 601 CGTCAAGGTT TTTGTCATGC TCGCCAACGT TGCATGAAAC CTTGAAACTT TGACAGCGCC 661 TTCCATGGAG GAAAGGTTGA GAGGGTTTTG ATAAGAAAGT AGAGTGGTTG TTGGTGAAGG 721 GAGAAGAGAG GGATTTGTTG GTGGATAATA AAGGAAGAGT ATTAGGAGTA GAAGAAGACA Predicted gene structure (within gDNA segment 15513 to 19309): Exon 1 16158 16939 ( 782 n); cDNA 1 780 ( 780 n); score: 0.900 MATCH C08HBa0336I24.1+ SGN-E327650- 0.900 782 1.003 C PGS_C08HBa0336I24.1+_SGN-E327650- (16158 16939) Alignment (genomic DNA sequence = upper lines): ATGATTTTGG TTACGTTTCT CATCGTAAAG AGATGATCCC TCACGATCAA ACATGGGAGG 16217 ||||| |||| |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| ATGAT-TTGG TTACGTTTCT CATCGTAAAG AGATGAACCC TCACGATCAA ACATGGGAGG 59 TATACGCATG CCTTTTGGAT GATCCCAATT CCAGTAAGGT AAAGCAAAAG TTGGATCATT 16277 ||||||||| || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATACGCATA CC-TTTGGAT GATCCCAATT CCAGTAAGGT AAAGCAAAAG TTGGATCATT 118 AATAAGTGAT CCCAAAATTC TTTCGTAAAA GTACAAGTAC CATCTATGAA AGGGAAAGAA 16337 ||||||||| ||||| || | |||||||||| |||||||||| |||||||| | | |||||||| AATAAGTGAC CCCAATATCC TTTCGTAAAA GTACAAGTAC CATCTATGGA ACGGAAAGAA 178 AAGCCACGAG AAATGAACTT GCAATTCTTT ACCACCAACT TTGTAAGCAC CGTTGCAATA 16397 |||||||||| |||||||||| |||||||||| |||||||| | || ||||||| |||| ||||| AAGCCACGAG AAATGAACTT GCAATTCTTT ACCACCAATT TTATAAGCAC CGTTACAATA 238 AGCACAATGA ATATTAGCTT GTTGTTTAAA GCCAAGAGGG TCAAAGGGGT CTTTATCAAG 16457 |||||||||| |||||||||| |||||||||| ||||||||| ||||| |||| |||||||||| AGCACAATGA ATATTAGCTT GTTGTTTAAA CCCAAGAGGG TCAAAAGGGT CTTTATCAAG 298 TTCCCTCATT CGACTCGTAG CCAATTGATA CTTGGCTACG TACTCCTCAT CCGCCGCATG 16517 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCCTCATT CGACTTGTAG CCAATTGATA CTTGGCTACG TACTCCTCAT CCGCCGCATG 358 AGCAGGGGGG CGGATGCGGA GTTTAGTCAT AGAAGGGAAC TTGTAGTACG GAACACTATC 16577 |||||||||| |||||||||| |||| ||||| || ||||||| |||||||||| |||| ||||| AGCAGGGGGG CGGATGCGGA GTTTCGTCAT AGGAGGGAAC TTGTAGTACG GAACGCTATC 418 GATATCATCG GGTACAGGAG GGCAACAACT GTATATTACA TCAACACC-- T-TCTTTTAC 16634 ||||||||| |||||||||| |||||||||| |||| || ||| ||| | || | || GATATCATCA GGTACAGGAG GGCAACAACT GTATGAGACT TCAGTACCTT TATCATCTAT 478 ATGGGCAGTA CCACAAGACT TGAGATCAGG AGGTGGTATA GGTGCAGCAG TCGCTAATGG 16694 ||||||| | |||||||| | |||||||||| ||||||||| || ||||||| |||||||| ATGGGCAACA CCACAAGATT TGAGATCAGG TGGTGGTATA GGAGCAGCAG AGGCTAATGG 538 TGCAAGATTA GCTGCACCAT AAAGACCTCC TAACCCTAAA AGAACGTTTC GTCTATCAAC 16754 |||||||||| |||||||||| ||| |||||| |||||||||| ||||| |||| |||||||| TGCAAGATTA GCTGCACCAT AAAAACCTCC TAACCCTAAA AGAACATTTC TCCTATCAAC 598 AGCGTCAGGG TTTTTGTCAA CGTTGTTTGC GTTGCATGAA ACCTTGAAAC TTTGATTACG 16814 ||||||| || ||||||||| | | | |||||||||| |||||||||| ||||| || AGCGTCAAGG TTTTTGTCAT GCTCGCCAAC GTTGCATGAA ACCTTGAAAC TTTGACAGCG 658 CCTTCCGTGG AGGAAAAGTT GAGAGGGTTT TGATAACAAG GATGAGTTGG TGGTGGTGAA 16874 |||||| ||| |||||| ||| |||||||||| |||||| || | |||| | || ||||||| CCTTCCATGG AGGAAAGGTT GAGAGGGTTT TGATAAGAAA GTAGAGTGGT TGTTGGTGAA 718 GGAAGAAGAG AGGGATTTGT TGGTGCATAA AGGAAGAGTA GTAGTAATAG AAGAAGAAGA 16934 || ||||||| |||||||||| ||||| || | | ||| | | | |||| ||| || |||||| GGGAGAAGAG AGGGATTTGT TGGTGGAT-A ATAAAG-GAA G-AGTATTAG GAGTAGAAGA 775 AGACA 16939 ||||| AGACA 780 hqPGS_C08HBa0336I24.1+_SGN-E327650- (16158 16939) ******************************************************************************** EST sequence 335 -strand 780 n (File: SGN-E322844-) 1 ATGATTTTGG TACGTTTTCT CATCGTAAAG AGATGATCCC TCACGATCAA ACATGGGAGG 61 TATACGCATG CCTTTTGGAT GATCCCAATT CCAGTAAGGT AAAGCAAAAG TTGGATCATT 121 AATAAGTGAT CCCAAAATTC TTTCGTAAAA GTACAAGTAC CATCTATGAA AGGGAAAGAA 181 AAGCCACGAG AAATGAACTT GCAATTCTTT ACCACCAACT TTGTAAGCAC CGTTGCAATA 241 AGCACAATGA ATATTAGCTT GTTGTTTAAA GCCAAGAGGG TCAAAGGGGT CTTTATCAAG 301 TTCCCTCATT CGACTCGTAG CCAATTGATA CTTGGCTACG TACTCCTCAT CCGCCGCATG 361 AGCAGGGGGG CGGATGCGGA GTTTAGTCAT AGAAGGGAAC TTGTAGTACG GAACACTATC 421 GATATCATCG GGTACAGGAG GGCAACAACT GTATATTACA TCAACACCTT CTTTTACATG 481 GGCAGTACCA CAAGACTTGA GATCAGGAGG TGGTATAGGT GCAGCAGTCG CTAATGGTGC 541 AAGATTAGCT GCACCATAAA GACCTCCTAA CCCTAAAAGA ACGTTTCGTC TATCAACAGC 601 GTCAGGGTTT TTGTCAACGT TGTTTGCGTT GCATGAAACC TTGAAACTTT GATTACGCCT 661 TCCGTGGAGG AAAAGTTGAG AGGGTTTTGA TAACAAGGAT GAGTTGGTGG TGGTGAAGGA 721 AGAAGAGAGG GATTTGTTGG TGCATAAAGG AAGAGTAGTA GTAATAGAAG AAGAAGAAGA Predicted gene structure (within gDNA segment 15413 to 17537): Exon 1 16158 16937 ( 780 n); cDNA 1 780 ( 780 n); score: 0.995 MATCH C08HBa0336I24.1+ SGN-E322844- 0.995 780 1.000 C PGS_C08HBa0336I24.1+_SGN-E322844- (16158 16937) Alignment (genomic DNA sequence = upper lines): ATGATTTTGG TTACGTTTCT CATCGTAAAG AGATGATCCC TCACGATCAA ACATGGGAGG 16217 |||||||||| | ||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGATTTTGG TACGTTTTCT CATCGTAAAG AGATGATCCC TCACGATCAA ACATGGGAGG 60 TATACGCATG CCTTTTGGAT GATCCCAATT CCAGTAAGGT AAAGCAAAAG TTGGATCATT 16277 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATACGCATG CCTTTTGGAT GATCCCAATT CCAGTAAGGT AAAGCAAAAG TTGGATCATT 120 AATAAGTGAT CCCAAAATTC TTTCGTAAAA GTACAAGTAC CATCTATGAA AGGGAAAGAA 16337 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATAAGTGAT CCCAAAATTC TTTCGTAAAA GTACAAGTAC CATCTATGAA AGGGAAAGAA 180 AAGCCACGAG AAATGAACTT GCAATTCTTT ACCACCAACT TTGTAAGCAC CGTTGCAATA 16397 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGCCACGAG AAATGAACTT GCAATTCTTT ACCACCAACT TTGTAAGCAC CGTTGCAATA 240 AGCACAATGA ATATTAGCTT GTTGTTTAAA GCCAAGAGGG TCAAAGGGGT CTTTATCAAG 16457 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCACAATGA ATATTAGCTT GTTGTTTAAA GCCAAGAGGG TCAAAGGGGT CTTTATCAAG 300 TTCCCTCATT CGACTCGTAG CCAATTGATA CTTGGCTACG TACTCCTCAT CCGCCGCATG 16517 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCCTCATT CGACTCGTAG CCAATTGATA CTTGGCTACG TACTCCTCAT CCGCCGCATG 360 AGCAGGGGGG CGGATGCGGA GTTTAGTCAT AGAAGGGAAC TTGTAGTACG GAACACTATC 16577 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCAGGGGGG CGGATGCGGA GTTTAGTCAT AGAAGGGAAC TTGTAGTACG GAACACTATC 420 GATATCATCG GGTACAGGAG GGCAACAACT GTATATTACA TCAACACCTT CTTTTACATG 16637 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATATCATCG GGTACAGGAG GGCAACAACT GTATATTACA TCAACACCTT CTTTTACATG 480 GGCAGTACCA CAAGACTTGA GATCAGGAGG TGGTATAGGT GCAGCAGTCG CTAATGGTGC 16697 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCAGTACCA CAAGACTTGA GATCAGGAGG TGGTATAGGT GCAGCAGTCG CTAATGGTGC 540 AAGATTAGCT GCACCATAAA GACCTCCTAA CCCTAAAAGA ACGTTTCGTC TATCAACAGC 16757 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGATTAGCT GCACCATAAA GACCTCCTAA CCCTAAAAGA ACGTTTCGTC TATCAACAGC 600 GTCAGGGTTT TTGTCAACGT TGTTTGCGTT GCATGAAACC TTGAAACTTT GATTACGCCT 16817 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCAGGGTTT TTGTCAACGT TGTTTGCGTT GCATGAAACC TTGAAACTTT GATTACGCCT 660 TCCGTGGAGG AAAAGTTGAG AGGGTTTTGA TAACAAGGAT GAGTTGGTGG TGGTGAAGGA 16877 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCGTGGAGG AAAAGTTGAG AGGGTTTTGA TAACAAGGAT GAGTTGGTGG TGGTGAAGGA 720 AGAAGAGAGG GATTTGTTGG TGCATAAAGG AAGAGTAGTA GTAATAGAAG AAGAAGAAGA 16937 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAGAGAGG GATTTGTTGG TGCATAAAGG AAGAGTAGTA GTAATAGAAG AAGAAGAAGA 780 hqPGS_C08HBa0336I24.1+_SGN-E322844- (16158 16937) ******************************************************************************** EST sequence 298 -strand 760 n (File: SGN-E320579-) 1 ATGATTTTGG TTACGTTTCT CATCGTAAAG AGATGAGCCG TCACGATCAA ACATGGGAGG 61 TATACGCATA CCTTTTGGAT GATCGCAATT CCAGTAAGGT AAAGCAAAAG TTGGATCATT 121 AATAAGTGAC CCCAATATCC TTTCGTAAAA GTACAAGTAC CATCTATGGA ACGGAAAGAA 181 AAGCCACGAG AAATGAACTT GCAATTCTTT ACCACCAATT TTATAAGCAC CGTTACAATA 241 AGCACAATGA ATATTAGCTT GTTGTTTAAA CCCAAGAGGG TCAAAAGGGT CTTTATCAAG 301 TTCCCTCATT CGACTTGTAG CCAATTGATA CTTGGCTACG TACTCCTCAT CCGCCGCATG 361 AGCAGGGGGG CGGATGCGGA GTTTCGTCAT AGGAGGGAAC TTGTAGTACG GAACGCTATC 421 GATATCATCA GGTACAGGAG GGCAACAACT GTATGAGACT TCAGTACCTT TATCATCTAT 481 ATGGGCAACA CCACAAGATT TGAGATCAGG TGGTGGTATA GGAGCAGCAG AGGCTAATGG 541 TGCAAGATTA GCTGCACCAT AAAAACCTCC TAACCCTAAA AGAACATTTC TCTTATCAAC 601 AGCGTCAAGG TTTTTGTCAT GCTCGCCAAC GTTGCATGAA ACCTTGAAAC TTTGACAGCG 661 CCTTCCATGG AGGAAAGGTT GAGAGGGTTT TGATAAGAAA GTAGAGTGGT TGTTGGTGAA 721 GGGAGAAGAG AGGGATTTGT TGGTGGATAA TAAAGGAAGA Predicted gene structure (within gDNA segment 15548 to 19089): Exon 1 16158 16911 ( 754 n); cDNA 1 757 ( 757 n); score: 0.901 MATCH C08HBa0336I24.1+ SGN-E320579- 0.901 754 0.992 C PGS_C08HBa0336I24.1+_SGN-E320579- (16158 16911) Alignment (genomic DNA sequence = upper lines): ATGATTTTGG TTACGTTTCT CATCGTAAAG AGATGATCCC TCACGATCAA ACATGGGAGG 16217 |||||||||| |||||||||| |||||||||| |||||| || |||||||||| |||||||||| ATGATTTTGG TTACGTTTCT CATCGTAAAG AGATGAGCCG TCACGATCAA ACATGGGAGG 60 TATACGCATG CCTTTTGGAT GATCCCAATT CCAGTAAGGT AAAGCAAAAG TTGGATCATT 16277 ||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| TATACGCATA CCTTTTGGAT GATCGCAATT CCAGTAAGGT AAAGCAAAAG TTGGATCATT 120 AATAAGTGAT CCCAAAATTC TTTCGTAAAA GTACAAGTAC CATCTATGAA AGGGAAAGAA 16337 ||||||||| ||||| || | |||||||||| |||||||||| |||||||| | | |||||||| AATAAGTGAC CCCAATATCC TTTCGTAAAA GTACAAGTAC CATCTATGGA ACGGAAAGAA 180 AAGCCACGAG AAATGAACTT GCAATTCTTT ACCACCAACT TTGTAAGCAC CGTTGCAATA 16397 |||||||||| |||||||||| |||||||||| |||||||| | || ||||||| |||| ||||| AAGCCACGAG AAATGAACTT GCAATTCTTT ACCACCAATT TTATAAGCAC CGTTACAATA 240 AGCACAATGA ATATTAGCTT GTTGTTTAAA GCCAAGAGGG TCAAAGGGGT CTTTATCAAG 16457 |||||||||| |||||||||| |||||||||| ||||||||| ||||| |||| |||||||||| AGCACAATGA ATATTAGCTT GTTGTTTAAA CCCAAGAGGG TCAAAAGGGT CTTTATCAAG 300 TTCCCTCATT CGACTCGTAG CCAATTGATA CTTGGCTACG TACTCCTCAT CCGCCGCATG 16517 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCCTCATT CGACTTGTAG CCAATTGATA CTTGGCTACG TACTCCTCAT CCGCCGCATG 360 AGCAGGGGGG CGGATGCGGA GTTTAGTCAT AGAAGGGAAC TTGTAGTACG GAACACTATC 16577 |||||||||| |||||||||| |||| ||||| || ||||||| |||||||||| |||| ||||| AGCAGGGGGG CGGATGCGGA GTTTCGTCAT AGGAGGGAAC TTGTAGTACG GAACGCTATC 420 GATATCATCG GGTACAGGAG GGCAACAACT GTATATTACA TCAACACC-- T-TCTTTTAC 16634 ||||||||| |||||||||| |||||||||| |||| || ||| ||| | || | || GATATCATCA GGTACAGGAG GGCAACAACT GTATGAGACT TCAGTACCTT TATCATCTAT 480 ATGGGCAGTA CCACAAGACT TGAGATCAGG AGGTGGTATA GGTGCAGCAG TCGCTAATGG 16694 ||||||| | |||||||| | |||||||||| ||||||||| || ||||||| |||||||| ATGGGCAACA CCACAAGATT TGAGATCAGG TGGTGGTATA GGAGCAGCAG AGGCTAATGG 540 TGCAAGATTA GCTGCACCAT AAAGACCTCC TAACCCTAAA AGAACGTTTC GTCTATCAAC 16754 |||||||||| |||||||||| ||| |||||| |||||||||| ||||| |||| ||||||| TGCAAGATTA GCTGCACCAT AAAAACCTCC TAACCCTAAA AGAACATTTC TCTTATCAAC 600 AGCGTCAGGG TTTTTGTCAA CGTTGTTTGC GTTGCATGAA ACCTTGAAAC TTTGATTACG 16814 ||||||| || ||||||||| | | | |||||||||| |||||||||| ||||| || AGCGTCAAGG TTTTTGTCAT GCTCGCCAAC GTTGCATGAA ACCTTGAAAC TTTGACAGCG 660 CCTTCCGTGG AGGAAAAGTT GAGAGGGTTT TGATAACAAG GATGAGTTGG TGGTGGTGAA 16874 |||||| ||| |||||| ||| |||||||||| |||||| || | |||| | || ||||||| CCTTCCATGG AGGAAAGGTT GAGAGGGTTT TGATAAGAAA GTAGAGTGGT TGTTGGTGAA 720 GGAAGAAGAG AGGGATTTGT TGGTGCATAA AGGAAGA 16911 || ||||||| |||||||||| ||||| |||| | || GGGAGAAGAG AGGGATTTGT TGGTGGATAA TAAAGGA 757 hqPGS_C08HBa0336I24.1+_SGN-E320579- (16158 16911) ******************************************************************************** EST sequence 155 -strand 775 n (File: SGN-E316597-) 1 TTACGTTTCT CATCGTAAAG AGATGACCCC TCACGATCAA ACATGGGGAG GTATACGCAT 61 ACCTTTTGGA TGATCCCAAT TCCAGTAAGG TAAAGCAAAA GTTGGATCAT TAATAAGTGA 121 CCCCAATATC CTTTCGTAAA AGTACAAGTA CCATCTATGG AACGGAAAGA AAAGCCACGA 181 GAAATGAACT TGCAATTCTT TACCACCAAT TTTATAAGCA CCGTTACAAT AAGCACAATG 241 AATATTAGCT TGTTGTTTAA ACCCAAGAGG GTCAAAAGGG TCTTTATCAA GTTCCCTCAT 301 TCGACTTGTA GCCAATTGAT ACTTGGCTAC GTACTCCTCA TCCGCCGCAT GAGCAGGGGG 361 GCGGATGCGG AGTTTCGTCA TAGGAGGGAA CTTGTAGTAC GGAACGCTAT CGATATCATC 421 AGGTACAGGA GGGCAACAAC TGTATGAGAC TTCAGTACCT TTATCATCTA TATGGGCAAC 481 ACCACAAGAT TTGAGATCAG GTGGTGGTAT AGGAGCAGCA GAGGCTAATG GTGCAAGATT 541 AGCTGCACCA TAAAAACCTC CTAACCCTAA AAGAACATTT CTCCTATCAA CAGCGTCAAG 601 GTTTTTGTCA TGCTCGCCAA CGTTGCATGA AACCTTGAAA CTTTGACAGC GCCTTCCATG 661 GAGGAAAGGT TGAGAGGGTT TTGATAAGAA AGTAGAGTGG TTGTTGGTGA AGGGAGAAGA 721 GAGGGATTTG TTGGTGGATA ATAAAGGAAG AGTATTAGGA GTAGAAGAAG ACATT Predicted gene structure (within gDNA segment 15558 to 19329): Exon 1 16168 16941 ( 774 n); cDNA 1 775 ( 775 n); score: 0.898 MATCH C08HBa0336I24.1+ SGN-E316597- 0.898 774 0.999 C PGS_C08HBa0336I24.1+_SGN-E316597- (16168 16941) Alignment (genomic DNA sequence = upper lines): TTACGTTTCT CATCGTAAAG AGATGATCCC TCACGATCAA ACAT-GGGAG GTATACGCAT 16226 |||||||||| |||||||||| |||||| ||| |||||||||| |||| ||||| |||||||||| TTACGTTTCT CATCGTAAAG AGATGACCCC TCACGATCAA ACATGGGGAG GTATACGCAT 60 GCCTTTTGGA TGATCCCAAT TCCAGTAAGG TAAAGCAAAA GTTGGATCAT TAATAAGTGA 16286 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTTTTGGA TGATCCCAAT TCCAGTAAGG TAAAGCAAAA GTTGGATCAT TAATAAGTGA 120 TCCCAAAATT CTTTCGTAAA AGTACAAGTA CCATCTATGA AAGGGAAAGA AAAGCCACGA 16346 ||||| || |||||||||| |||||||||| ||||||||| || ||||||| |||||||||| CCCCAATATC CTTTCGTAAA AGTACAAGTA CCATCTATGG AACGGAAAGA AAAGCCACGA 180 GAAATGAACT TGCAATTCTT TACCACCAAC TTTGTAAGCA CCGTTGCAAT AAGCACAATG 16406 |||||||||| |||||||||| ||||||||| ||| |||||| ||||| |||| |||||||||| GAAATGAACT TGCAATTCTT TACCACCAAT TTTATAAGCA CCGTTACAAT AAGCACAATG 240 AATATTAGCT TGTTGTTTAA AGCCAAGAGG GTCAAAGGGG TCTTTATCAA GTTCCCTCAT 16466 |||||||||| |||||||||| | |||||||| |||||| ||| |||||||||| |||||||||| AATATTAGCT TGTTGTTTAA ACCCAAGAGG GTCAAAAGGG TCTTTATCAA GTTCCCTCAT 300 TCGACTCGTA GCCAATTGAT ACTTGGCTAC GTACTCCTCA TCCGCCGCAT GAGCAGGGGG 16526 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGACTTGTA GCCAATTGAT ACTTGGCTAC GTACTCCTCA TCCGCCGCAT GAGCAGGGGG 360 GCGGATGCGG AGTTTAGTCA TAGAAGGGAA CTTGTAGTAC GGAACACTAT CGATATCATC 16586 |||||||||| ||||| |||| ||| |||||| |||||||||| ||||| |||| |||||||||| GCGGATGCGG AGTTTCGTCA TAGGAGGGAA CTTGTAGTAC GGAACGCTAT CGATATCATC 420 GGGTACAGGA GGGCAACAAC TGTATATTAC ATCAACACC- -T-TCTTTTA CATGGGCAGT 16643 ||||||||| |||||||||| ||||| || ||| ||| | || | || ||||||| AGGTACAGGA GGGCAACAAC TGTATGAGAC TTCAGTACCT TTATCATCTA TATGGGCAAC 480 ACCACAAGAC TTGAGATCAG GAGGTGGTAT AGGTGCAGCA GTCGCTAATG GTGCAAGATT 16703 ||||||||| |||||||||| | |||||||| ||| |||||| | ||||||| |||||||||| ACCACAAGAT TTGAGATCAG GTGGTGGTAT AGGAGCAGCA GAGGCTAATG GTGCAAGATT 540 AGCTGCACCA TAAAGACCTC CTAACCCTAA AAGAACGTTT CGTCTATCAA CAGCGTCAGG 16763 |||||||||| |||| ||||| |||||||||| |||||| ||| | ||||||| |||||||| | AGCTGCACCA TAAAAACCTC CTAACCCTAA AAGAACATTT CTCCTATCAA CAGCGTCAAG 600 GTTTTTGTCA ACGTTGTTTG CGTTGCATGA AACCTTGAAA CTTTGATTAC GCCTTCCGTG 16823 |||||||||| | | |||||||||| |||||||||| |||||| | ||||||| || GTTTTTGTCA TGCTCGCCAA CGTTGCATGA AACCTTGAAA CTTTGACAGC GCCTTCCATG 660 GAGGAAAAGT TGAGAGGGTT TTGATAACAA GGATGAGTTG GTGGTGGTGA AGGAAGAAGA 16883 ||||||| || |||||||||| ||||||| || | |||| | || |||||| ||| |||||| GAGGAAAGGT TGAGAGGGTT TTGATAAGAA AGTAGAGTGG TTGTTGGTGA AGGGAGAAGA 720 GAGGGATTTG TTGGTGCATA AAGGAAGAGT AGTAGTAATA GAAGAAGAAG AAGACATT 16941 |||||||||| |||||| || || ||| | || |||| || | || ||||| |||||||| GAGGGATTTG TTGGTGGAT- AATAAAG-GA AG-AGTATTA GGAGTAGAAG AAGACATT 775 hqPGS_C08HBa0336I24.1+_SGN-E316597- (16168 16941) ******************************************************************************** EST sequence 339 -strand 762 n (File: SGN-E319980-) 1 CATCGTAAAG AGATGATCCC TCACGATCAA ACATGGGAGG TATACGCATG CCTTTTGGAT 61 GATCCCAATT CCAGTAAGGT AAAGCAAAAG TTGGATCATT AATAAGTGAT CCCAAAATTC 121 TTTCGTAAAA GTACAAGTAC CATCTATGAA AGGGAAAGAA AAGCCACGAG AAATGAACTT 181 GCAATTCTTT ACCACCAACT TTGTAAGCAC CGTTGCAATA AGCACAATGA ATATTAGCTT 241 GTTGTTTAAA GCCAAGAGGG TCAAAGGGGT CTTTATCAAG TTCCCTCATT CGACTCGTAG 301 CCAATTGATA CTTGGCTACG TACTCCTCAT CCGCCGCATG AGCAGGGGGG CGGATGCGGA 361 GTTTAGTCAT AGAAGGGAAC TTGTAGTACG GAACACTATC GATATCATCG GGTACAGGAG 421 GGCAACAACT GTATATTACA TCAACACCTT CTTTTACATG GGCAGTACCA CAAGACTTGA 481 GATCAGGAGG TGGTATAGGT GCAGCAGTCG CTAATGGTGC AAGATTAGCT GCACCATAAA 541 GACCTCCTAA CCCTAAAAGA ACGTTTCGTC TATCAACAGC GTCAGGGTTT TTGTCAACGT 601 TGTTTGCGTT GCATGAAACC TTGAAACTTT GATTACGCCT TCCGTGGAGG AAAAGTTGAG 661 AGGGTTTTGA TAACAAGGAT GAGTTGGTGG TGGTGAAGGA AGAAGAGAGG GATTTGTTGG 721 TGCATAAAGG AAGAGTAGTA GTAATAGAAG AAGAAGAAGA CA Predicted gene structure (within gDNA segment 15568 to 17539): Exon 1 16178 16939 ( 762 n); cDNA 1 762 ( 762 n); score: 1.000 MATCH C08HBa0336I24.1+ SGN-E319980- 1.000 762 1.000 C PGS_C08HBa0336I24.1+_SGN-E319980- (16178 16939) Alignment (genomic DNA sequence = upper lines): CATCGTAAAG AGATGATCCC TCACGATCAA ACATGGGAGG TATACGCATG CCTTTTGGAT 16237 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCGTAAAG AGATGATCCC TCACGATCAA ACATGGGAGG TATACGCATG CCTTTTGGAT 60 GATCCCAATT CCAGTAAGGT AAAGCAAAAG TTGGATCATT AATAAGTGAT CCCAAAATTC 16297 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATCCCAATT CCAGTAAGGT AAAGCAAAAG TTGGATCATT AATAAGTGAT CCCAAAATTC 120 TTTCGTAAAA GTACAAGTAC CATCTATGAA AGGGAAAGAA AAGCCACGAG AAATGAACTT 16357 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCGTAAAA GTACAAGTAC CATCTATGAA AGGGAAAGAA AAGCCACGAG AAATGAACTT 180 GCAATTCTTT ACCACCAACT TTGTAAGCAC CGTTGCAATA AGCACAATGA ATATTAGCTT 16417 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAATTCTTT ACCACCAACT TTGTAAGCAC CGTTGCAATA AGCACAATGA ATATTAGCTT 240 GTTGTTTAAA GCCAAGAGGG TCAAAGGGGT CTTTATCAAG TTCCCTCATT CGACTCGTAG 16477 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGTTTAAA GCCAAGAGGG TCAAAGGGGT CTTTATCAAG TTCCCTCATT CGACTCGTAG 300 CCAATTGATA CTTGGCTACG TACTCCTCAT CCGCCGCATG AGCAGGGGGG CGGATGCGGA 16537 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAATTGATA CTTGGCTACG TACTCCTCAT CCGCCGCATG AGCAGGGGGG CGGATGCGGA 360 GTTTAGTCAT AGAAGGGAAC TTGTAGTACG GAACACTATC GATATCATCG GGTACAGGAG 16597 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTAGTCAT AGAAGGGAAC TTGTAGTACG GAACACTATC GATATCATCG GGTACAGGAG 420 GGCAACAACT GTATATTACA TCAACACCTT CTTTTACATG GGCAGTACCA CAAGACTTGA 16657 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCAACAACT GTATATTACA TCAACACCTT CTTTTACATG GGCAGTACCA CAAGACTTGA 480 GATCAGGAGG TGGTATAGGT GCAGCAGTCG CTAATGGTGC AAGATTAGCT GCACCATAAA 16717 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATCAGGAGG TGGTATAGGT GCAGCAGTCG CTAATGGTGC AAGATTAGCT GCACCATAAA 540 GACCTCCTAA CCCTAAAAGA ACGTTTCGTC TATCAACAGC GTCAGGGTTT TTGTCAACGT 16777 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCTCCTAA CCCTAAAAGA ACGTTTCGTC TATCAACAGC GTCAGGGTTT TTGTCAACGT 600 TGTTTGCGTT GCATGAAACC TTGAAACTTT GATTACGCCT TCCGTGGAGG AAAAGTTGAG 16837 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTTGCGTT GCATGAAACC TTGAAACTTT GATTACGCCT TCCGTGGAGG AAAAGTTGAG 660 AGGGTTTTGA TAACAAGGAT GAGTTGGTGG TGGTGAAGGA AGAAGAGAGG GATTTGTTGG 16897 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGTTTTGA TAACAAGGAT GAGTTGGTGG TGGTGAAGGA AGAAGAGAGG GATTTGTTGG 720 TGCATAAAGG AAGAGTAGTA GTAATAGAAG AAGAAGAAGA CA 16939 |||||||||| |||||||||| |||||||||| |||||||||| || TGCATAAAGG AAGAGTAGTA GTAATAGAAG AAGAAGAAGA CA 762 hqPGS_C08HBa0336I24.1+_SGN-E319980- (16178 16939) ******************************************************************************** EST sequence 214 -strand 753 n (File: SGN-E328939-) 1 CATCGTAAAG AGATGAACCC TCACGATCAA ACATGGGAGG TATACGCATA CCTTTTGGAT 61 GATCCCAATT CCAGTAAGGT AAAGCAAAAG TTGGATCATT AATAAGTGAC CCCAATATCC 121 TTTCGTAAAA GTACAAGTAC CATCTATGGA ACGGAAAGAA AAGCCACGAG AAATGAACTT 181 GCAATTCTTT ACCACCAATT TTATAAGCAC CGTTACAATA AGCACAATGA ATATTAGCTT 241 GTTGTTTAAA CCCAAGAGGG TCAAAAGGGT CTTTATCAAG TTCCCTCATT CGACTTGTAG 301 CCAATTGATA CTTGGCTACG TACTCCTCAT CCGCCGCATG AGCAGGGGGG CGGATGCGGA 361 GTTTCGTCAT AGGAGGGAAC TTGTAGTACG GAACGCTATC GATATCATCA GGTACAGGAG 421 GGCAACAACT GTATGAGACT TCAGTACCTT TATCATCTAT ATGGGCAACA CCACAAGATT 481 TGAGATCAGG TGGTGGTATA GGAGCAGCAG AGGCTAATGG TGCAAGATTA GCTGCACCAT 541 AAAAACCTCC TAACCCTAAA AGAACATTTC TCCTATCAAC AGCGTCAAGG TTTTTGTCAT 601 GCTCGCCAAC GTTGCATGAA ACCTTGAAAC TTTGACAGCG CCTTCCATGG AGGAAAGGTT 661 GAGAGGGTTT TGATAAGAAA GTAGAGTGGT TGTTGGTGAA GGGAGAAGAG AGGGATTTGT 721 TGGTGGATAA TAAAGGAAGA GTATTAGGAG TAG Predicted gene structure (within gDNA segment 15568 to 19219): Exon 1 16178 16927 ( 750 n); cDNA 1 753 ( 753 n); score: 0.897 MATCH C08HBa0336I24.1+ SGN-E328939- 0.897 750 0.996 C PGS_C08HBa0336I24.1+_SGN-E328939- (16178 16927) Alignment (genomic DNA sequence = upper lines): CATCGTAAAG AGATGATCCC TCACGATCAA ACATGGGAGG TATACGCATG CCTTTTGGAT 16237 |||||||||| |||||| ||| |||||||||| |||||||||| ||||||||| |||||||||| CATCGTAAAG AGATGAACCC TCACGATCAA ACATGGGAGG TATACGCATA CCTTTTGGAT 60 GATCCCAATT CCAGTAAGGT AAAGCAAAAG TTGGATCATT AATAAGTGAT CCCAAAATTC 16297 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| ||||| || | GATCCCAATT CCAGTAAGGT AAAGCAAAAG TTGGATCATT AATAAGTGAC CCCAATATCC 120 TTTCGTAAAA GTACAAGTAC CATCTATGAA AGGGAAAGAA AAGCCACGAG AAATGAACTT 16357 |||||||||| |||||||||| |||||||| | | |||||||| |||||||||| |||||||||| TTTCGTAAAA GTACAAGTAC CATCTATGGA ACGGAAAGAA AAGCCACGAG AAATGAACTT 180 GCAATTCTTT ACCACCAACT TTGTAAGCAC CGTTGCAATA AGCACAATGA ATATTAGCTT 16417 |||||||||| |||||||| | || ||||||| |||| ||||| |||||||||| |||||||||| GCAATTCTTT ACCACCAATT TTATAAGCAC CGTTACAATA AGCACAATGA ATATTAGCTT 240 GTTGTTTAAA GCCAAGAGGG TCAAAGGGGT CTTTATCAAG TTCCCTCATT CGACTCGTAG 16477 |||||||||| ||||||||| ||||| |||| |||||||||| |||||||||| ||||| |||| GTTGTTTAAA CCCAAGAGGG TCAAAAGGGT CTTTATCAAG TTCCCTCATT CGACTTGTAG 300 CCAATTGATA CTTGGCTACG TACTCCTCAT CCGCCGCATG AGCAGGGGGG CGGATGCGGA 16537 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAATTGATA CTTGGCTACG TACTCCTCAT CCGCCGCATG AGCAGGGGGG CGGATGCGGA 360 GTTTAGTCAT AGAAGGGAAC TTGTAGTACG GAACACTATC GATATCATCG GGTACAGGAG 16597 |||| ||||| || ||||||| |||||||||| |||| ||||| ||||||||| |||||||||| GTTTCGTCAT AGGAGGGAAC TTGTAGTACG GAACGCTATC GATATCATCA GGTACAGGAG 420 GGCAACAACT GTATATTACA TCAACACC-- T-TCTTTTAC ATGGGCAGTA CCACAAGACT 16654 |||||||||| |||| || ||| ||| | || | || ||||||| | |||||||| | GGCAACAACT GTATGAGACT TCAGTACCTT TATCATCTAT ATGGGCAACA CCACAAGATT 480 TGAGATCAGG AGGTGGTATA GGTGCAGCAG TCGCTAATGG TGCAAGATTA GCTGCACCAT 16714 |||||||||| ||||||||| || ||||||| |||||||| |||||||||| |||||||||| TGAGATCAGG TGGTGGTATA GGAGCAGCAG AGGCTAATGG TGCAAGATTA GCTGCACCAT 540 AAAGACCTCC TAACCCTAAA AGAACGTTTC GTCTATCAAC AGCGTCAGGG TTTTTGTCAA 16774 ||| |||||| |||||||||| ||||| |||| |||||||| ||||||| || ||||||||| AAAAACCTCC TAACCCTAAA AGAACATTTC TCCTATCAAC AGCGTCAAGG TTTTTGTCAT 600 CGTTGTTTGC GTTGCATGAA ACCTTGAAAC TTTGATTACG CCTTCCGTGG AGGAAAAGTT 16834 | | | |||||||||| |||||||||| ||||| || |||||| ||| |||||| ||| GCTCGCCAAC GTTGCATGAA ACCTTGAAAC TTTGACAGCG CCTTCCATGG AGGAAAGGTT 660 GAGAGGGTTT TGATAACAAG GATGAGTTGG TGGTGGTGAA GGAAGAAGAG AGGGATTTGT 16894 |||||||||| |||||| || | |||| | || ||||||| || ||||||| |||||||||| GAGAGGGTTT TGATAAGAAA GTAGAGTGGT TGTTGGTGAA GGGAGAAGAG AGGGATTTGT 720 TGGTGCATAA AGGAAGAGTA GTAGTAATAG AAG 16927 ||||| |||| | || | ||| || || || TGGTGGATAA TAAAGGAAGA GTATTAGGAG TAG 753 hqPGS_C08HBa0336I24.1+_SGN-E328939- (16178 16927) ******************************************************************************** EST sequence 167 -strand 732 n (File: SGN-E315843-) 1 CATCGTAAAG AGATGACCCC TCACGATCAA ACNATGGGAG GTATACGCAT ACCTTTTGGA 61 TGATCCCAAT TCCAGNTAAG GTAAAGCAAA AGTTGGATCA TTAATAAGTG ACCCCAATAT 121 CCTTTCGTAA AAGTACAAGT ACCATCTATG GAACGGAAAG AAAAGCCACG AGAAATGAAC 181 TTGCAATTCT TTACCACCAA TTTTATAAGC ACCGTTACAA TAAGCACAAT GAATATTAGC 241 TTGTTGTTTA AACCCAAGAG GGTCAAAAGG GTCTTTATCA AGTTCCCTCA TTCGACTTGT 301 AGCCAATTGA TACTTGGCTA CGTACTCCTC ATCCGCCGCA TGAGCAGGGG GGCGGATGCG 361 GAGTTTCGTC ATAGGAGGGA ACTTGTAGTA CGGAACGCTA TCGATATCAT CAGGTACAGG 421 AGGGCAACAA CTGTATGAGA CTTCAGTACC TTTATCATCT ATATGGGCAA CACCACAAGA 481 TTTGAGATCA GGTGGTGGTA TAGGAGCAGC AGAGGCTAAT GGTGCAAGAT TAGCTGCACC 541 ATAAAAACCT CCTAACCCTA AAAGAACATT TCTCCTATCA ACAGCGTCAA GGTTTTTGTC 601 ATGCTCGCCA ACGTTGCATG AAACCTTGAA ACTTTGACAG CGCCTTCCAT GGAGGAAAGG 661 TTGAGAGGGT TTTGATAAGA AAGTAGAGTG GTTGTTGGTG AAGGGAGAAG AGAGGGATTT 721 GTTGGTGGAT AA Predicted gene structure (within gDNA segment 15568 to 18989): Exon 1 16178 16904 ( 727 n); cDNA 1 732 ( 732 n); score: 0.900 MATCH C08HBa0336I24.1+ SGN-E315843- 0.900 727 0.993 C PGS_C08HBa0336I24.1+_SGN-E315843- (16178 16904) Alignment (genomic DNA sequence = upper lines): CATCGTAAAG AGATGATCCC TCACGATCAA AC-ATGGGAG GTATACGCAT GCCTTTTGGA 16236 |||||||||| |||||| ||| |||||||||| || ||||||| |||||||||| ||||||||| CATCGTAAAG AGATGACCCC TCACGATCAA ACNATGGGAG GTATACGCAT ACCTTTTGGA 60 TGATCCCAAT TCCAG-TAAG GTAAAGCAAA AGTTGGATCA TTAATAAGTG ATCCCAAAAT 16295 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| | ||||| || TGATCCCAAT TCCAGNTAAG GTAAAGCAAA AGTTGGATCA TTAATAAGTG ACCCCAATAT 120 TCTTTCGTAA AAGTACAAGT ACCATCTATG AAAGGGAAAG AAAAGCCACG AGAAATGAAC 16355 ||||||||| |||||||||| |||||||||| || |||||| |||||||||| |||||||||| CCTTTCGTAA AAGTACAAGT ACCATCTATG GAACGGAAAG AAAAGCCACG AGAAATGAAC 180 TTGCAATTCT TTACCACCAA CTTTGTAAGC ACCGTTGCAA TAAGCACAAT GAATATTAGC 16415 |||||||||| |||||||||| ||| ||||| |||||| ||| |||||||||| |||||||||| TTGCAATTCT TTACCACCAA TTTTATAAGC ACCGTTACAA TAAGCACAAT GAATATTAGC 240 TTGTTGTTTA AAGCCAAGAG GGTCAAAGGG GTCTTTATCA AGTTCCCTCA TTCGACTCGT 16475 |||||||||| || ||||||| ||||||| || |||||||||| |||||||||| ||||||| || TTGTTGTTTA AACCCAAGAG GGTCAAAAGG GTCTTTATCA AGTTCCCTCA TTCGACTTGT 300 AGCCAATTGA TACTTGGCTA CGTACTCCTC ATCCGCCGCA TGAGCAGGGG GGCGGATGCG 16535 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCAATTGA TACTTGGCTA CGTACTCCTC ATCCGCCGCA TGAGCAGGGG GGCGGATGCG 360 GAGTTTAGTC ATAGAAGGGA ACTTGTAGTA CGGAACACTA TCGATATCAT CGGGTACAGG 16595 |||||| ||| |||| ||||| |||||||||| |||||| ||| |||||||||| | |||||||| GAGTTTCGTC ATAGGAGGGA ACTTGTAGTA CGGAACGCTA TCGATATCAT CAGGTACAGG 420 AGGGCAACAA CTGTATATTA CATCAACACC --T-TCTTTT ACATGGGCAG TACCACAAGA 16652 |||||||||| |||||| | | ||| ||| | || | | | ||||||| ||||||||| AGGGCAACAA CTGTATGAGA CTTCAGTACC TTTATCATCT ATATGGGCAA CACCACAAGA 480 CTTGAGATCA GGAGGTGGTA TAGGTGCAGC AGTCGCTAAT GGTGCAAGAT TAGCTGCACC 16712 ||||||||| || ||||||| |||| ||||| || |||||| |||||||||| |||||||||| TTTGAGATCA GGTGGTGGTA TAGGAGCAGC AGAGGCTAAT GGTGCAAGAT TAGCTGCACC 540 ATAAAGACCT CCTAACCCTA AAAGAACGTT TCGTCTATCA ACAGCGTCAG GGTTTTTGTC 16772 ||||| |||| |||||||||| ||||||| || || |||||| ||||||||| |||||||||| ATAAAAACCT CCTAACCCTA AAAGAACATT TCTCCTATCA ACAGCGTCAA GGTTTTTGTC 600 AACGTTGTTT GCGTTGCATG AAACCTTGAA ACTTTGATTA CGCCTTCCGT GGAGGAAAAG 16832 | | | ||||||||| |||||||||| ||||||| |||||||| | |||||||| | ATGCTCGCCA ACGTTGCATG AAACCTTGAA ACTTTGACAG CGCCTTCCAT GGAGGAAAGG 660 TTGAGAGGGT TTTGATAACA AGGATGAGTT GGTGGTGGTG AAGGAAGAAG AGAGGGATTT 16892 |||||||||| |||||||| | | | |||| | || ||||| |||| ||||| |||||||||| TTGAGAGGGT TTTGATAAGA AAGTAGAGTG GTTGTTGGTG AAGGGAGAAG AGAGGGATTT 720 GTTGGTGCAT AA 16904 ||||||| || || GTTGGTGGAT AA 732 hqPGS_C08HBa0336I24.1+_SGN-E315843- (16178 16904) ******************************************************************************** EST sequence 147 -strand 755 n (File: SGN-E315180-) 1 TAAAGAGATG AACCCTCACG ATCAACATGG GGAGGTATAC GCATACCTTT TGGATGATCC 61 CAATCCNAGT AAGGTAAAGC AAAAGTTGGA TCATTAATAA GTGACCCCAA TATCCTTTCG 121 TAAAAGTACA AGTACCATCT ATGGAACGGA AAGAAAAGCC ACGAGAAATG AACTTGCAAT 181 TCTTTACCAC CAATTTTATA AGCACCGTTA CAATAAGCAC AATGAATATT AGCTTGTTGT 241 TTAAACCCAA GAGGGTCAAA AGGGTCTTTA TCAAGTTCCC TCATTCGACT TGTAGCCAAT 301 TGATACTTGG CTACGTACTC CTCATCCGCC GCATGAGCAG GGGGGCGGAT GCGGAGTTTC 361 GTCATAGGAG GGAACTTGTA GTACGGAACG CTATCGATAT CATCAGGTAC AGGAGGGCAA 421 CAACTGTATG AGACTTCAGT ACCTTTATCA TCTATATGGG CAACACCACA AGATTTGAGA 481 TCAGGTGGTG GTATAGGAGC AGCAGAGGCT AATGGTGCAA GATTAGCTGC ACCATAAAAA 541 CCTCCTAACC CTAAAAGAAC ATTTCTCCTA TCAACAGCGT CAAGGTTTTT GTCATGCTCG 601 CCAACGTTGC ATGAAACCTT GAAACTTTGA CAGCGCCTTC CATGGAGGAA AGGTTGAGAG 661 GGTTTTGATA AGAAAGTAGA GTGGTTGTTG GTGAAGGGAG AAGAGAGGGA TTTGTTGGTG 721 GATAATAAAG GAAGAGTATT AGGAGTAGAA GAAGA Predicted gene structure (within gDNA segment 15168 to 19289): Exon 1 16183 16934 ( 752 n); cDNA 1 755 ( 755 n); score: 0.889 MATCH C08HBa0336I24.1+ SGN-E315180- 0.889 752 0.996 C PGS_C08HBa0336I24.1+_SGN-E315180- (16183 16934) Alignment (genomic DNA sequence = upper lines): TAAAGAGATG ATCCCTCACG ATCAAACATG GGAGGTATAC GCATGCCTTT TGGATGATCC 16242 |||||||||| | |||||||| ||||| | |||||||||| |||| ||||| |||||||||| TAAAGAGATG AACCCTCACG ATCAACATGG GGAGGTATAC GCATACCTTT TGGATGATCC 60 CAATTCCAGT AAGGTAAAGC AAAAGTTGGA TCATTAATAA GTGATCCCAA AATTCTTTCG 16302 |||| | ||| |||||||||| |||||||||| |||||||||| |||| ||||| || |||||| CAATCCNAGT AAGGTAAAGC AAAAGTTGGA TCATTAATAA GTGACCCCAA TATCCTTTCG 120 TAAAAGTACA AGTACCATCT ATGAAAGGGA AAGAAAAGCC ACGAGAAATG AACTTGCAAT 16362 |||||||||| |||||||||| ||| || ||| |||||||||| |||||||||| |||||||||| TAAAAGTACA AGTACCATCT ATGGAACGGA AAGAAAAGCC ACGAGAAATG AACTTGCAAT 180 TCTTTACCAC CAACTTTGTA AGCACCGTTG CAATAAGCAC AATGAATATT AGCTTGTTGT 16422 |||||||||| ||| ||| || ||||||||| |||||||||| |||||||||| |||||||||| TCTTTACCAC CAATTTTATA AGCACCGTTA CAATAAGCAC AATGAATATT AGCTTGTTGT 240 TTAAAGCCAA GAGGGTCAAA GGGGTCTTTA TCAAGTTCCC TCATTCGACT CGTAGCCAAT 16482 ||||| |||| |||||||||| ||||||||| |||||||||| |||||||||| ||||||||| TTAAACCCAA GAGGGTCAAA AGGGTCTTTA TCAAGTTCCC TCATTCGACT TGTAGCCAAT 300 TGATACTTGG CTACGTACTC CTCATCCGCC GCATGAGCAG GGGGGCGGAT GCGGAGTTTA 16542 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| TGATACTTGG CTACGTACTC CTCATCCGCC GCATGAGCAG GGGGGCGGAT GCGGAGTTTC 360 GTCATAGAAG GGAACTTGTA GTACGGAACA CTATCGATAT CATCGGGTAC AGGAGGGCAA 16602 ||||||| || |||||||||| ||||||||| |||||||||| |||| ||||| |||||||||| GTCATAGGAG GGAACTTGTA GTACGGAACG CTATCGATAT CATCAGGTAC AGGAGGGCAA 420 CAACTGTATA TTACATCAAC ACC--T-TCT TTTACATGGG CAGTACCACA AGACTTGAGA 16659 ||||||||| || ||| ||| | || | || ||||| || |||||| ||| |||||| CAACTGTATG AGACTTCAGT ACCTTTATCA TCTATATGGG CAACACCACA AGATTTGAGA 480 TCAGGAGGTG GTATAGGTGC AGCAGTCGCT AATGGTGCAA GATTAGCTGC ACCATAAAGA 16719 ||||| |||| ||||||| || ||||| ||| |||||||||| |||||||||| |||||||| | TCAGGTGGTG GTATAGGAGC AGCAGAGGCT AATGGTGCAA GATTAGCTGC ACCATAAAAA 540 CCTCCTAACC CTAAAAGAAC GTTTCGTCTA TCAACAGCGT CAGGGTTTTT GTCAACGTTG 16779 |||||||||| |||||||||| |||| ||| |||||||||| || ||||||| |||| | | CCTCCTAACC CTAAAAGAAC ATTTCTCCTA TCAACAGCGT CAAGGTTTTT GTCATGCTCG 600 TTTGCGTTGC ATGAAACCTT GAAACTTTGA TTACGCCTTC CGTGGAGGAA AAGTTGAGAG 16839 |||||| |||||||||| |||||||||| ||||||| | |||||||| | |||||||| CCAACGTTGC ATGAAACCTT GAAACTTTGA CAGCGCCTTC CATGGAGGAA AGGTTGAGAG 660 GGTTTTGATA ACAAGGATGA GTTGGTGGTG GTGAAGGAAG AAGAGAGGGA TTTGTTGGTG 16899 |||||||||| | || | || || | || || ||||||| || |||||||||| |||||||||| GGTTTTGATA AGAAAGTAGA GTGGTTGTTG GTGAAGGGAG AAGAGAGGGA TTTGTTGGTG 720 CATAAAGGAA GAGTAGTAGT AATAGAAGAA GAAGA 16934 |||| | || |||| | | || |||| ||||| GATAATAAAG GAAGAGTATT AGGAGTAGAA GAAGA 755 hqPGS_C08HBa0336I24.1+_SGN-E315180- (16183 16934) ******************************************************************************** EST sequence 86 -strand 422 n (File: SGN-E326412-) 1 AAAAAGATGA ACCCTCTCGT TCAAACATGG GAGGTATGCG CATACTTTTT GGATGATCCC 61 AATTCCAGTA AGGTAAAGCA AAAGTTGGAT CATTAATAAG TGACCCCAAT ATCCTTTCGT 121 AAAAGTACAA GTACCATCTA TGGAACGGAA AGAAAAGCCT CGAGAAATGA ACTTGCAATT 181 CTTTACCTCC AATTTTATAA GCACCGTTAC AATAAGCACA ATGAATATTA GCTTGTTGTT 241 TAAACCCTAG AGGGTCAAAA GGGTCTTTAT CAAGTTCCCT CATTAGACTT GTAGACAATT 301 GATACTTGGC TACGTACTCA GCATTTGTCG CATGATCATG GGGGGGGATG AGGAGTTTTG 361 TCATAGTAGG GAACTTGGAG TATGTCTTGC TGGTTCCAAT TCCACGAAAA GGAGGGCAAC 421 AC Predicted gene structure (within gDNA segment 15394 to 18132): Exon 1 16184 16559 ( 376 n); cDNA 1 376 ( 376 n); score: 0.910 MATCH C08HBa0336I24.1+ SGN-E326412- 0.910 376 0.891 C PGS_C08HBa0336I24.1+_SGN-E326412- (16184 16559) Alignment (genomic DNA sequence = upper lines): AAAGAGATGA TCCCTCACGA TCAAACATGG GAGGTATACG CATGCCTTTT GGATGATCCC 16243 ||| |||||| ||||| || |||||||||| ||||||| || ||| | |||| |||||||||| AAAAAGATGA ACCCTCTCGT TCAAACATGG GAGGTATGCG CATACTTTTT GGATGATCCC 60 AATTCCAGTA AGGTAAAGCA AAAGTTGGAT CATTAATAAG TGATCCCAAA ATTCTTTCGT 16303 |||||||||| |||||||||| |||||||||| |||||||||| ||| ||||| || ||||||| AATTCCAGTA AGGTAAAGCA AAAGTTGGAT CATTAATAAG TGACCCCAAT ATCCTTTCGT 120 AAAAGTACAA GTACCATCTA TGAAAGGGAA AGAAAAGCCA CGAGAAATGA ACTTGCAATT 16363 |||||||||| |||||||||| || || |||| ||||||||| |||||||||| |||||||||| AAAAGTACAA GTACCATCTA TGGAACGGAA AGAAAAGCCT CGAGAAATGA ACTTGCAATT 180 CTTTACCACC AACTTTGTAA GCACCGTTGC AATAAGCACA ATGAATATTA GCTTGTTGTT 16423 ||||||| || || ||| ||| |||||||| | |||||||||| |||||||||| |||||||||| CTTTACCTCC AATTTTATAA GCACCGTTAC AATAAGCACA ATGAATATTA GCTTGTTGTT 240 TAAAGCCAAG AGGGTCAAAG GGGTCTTTAT CAAGTTCCCT CATTCGACTC GTAGCCAATT 16483 |||| || || ||||||||| |||||||||| |||||||||| |||| |||| |||| ||||| TAAACCCTAG AGGGTCAAAA GGGTCTTTAT CAAGTTCCCT CATTAGACTT GTAGACAATT 300 GATACTTGGC TACGTACTCC TCATCCGCCG CATGAGCAGG GGGGCGGATG CGGAGTTTAG 16543 |||||||||| ||||||||| ||| | || ||||| || | |||| ||||| ||||||| | GATACTTGGC TACGTACTCA GCATTTGTCG CATGATCATG GGGGGGGATG AGGAGTTTTG 360 TCATAGAAGG GAACTT 16559 |||||| ||| |||||| TCATAGTAGG GAACTT 376 hqPGS_C08HBa0336I24.1+_SGN-E326412- (16184 16559) ******************************************************************************** EST sequence 219 -strand 757 n (File: SGN-E317780-) 1 AAGAGATGAT CCCTCACGAT CAAGCATGGG AGGTATACGC ATGCCTTTTG GATGATCGCA 61 TTTCCAGTAA GGTAGAGCAA AAGTTGGATC ATTAATAAGT GATCCCAAAA TTCTTTCGTA 121 AAAGTACAAG TACCATCTAT GAAAGGGAAA GAAAAGCCAC GAGAAATGAA CTTGCAATTC 181 TTTACCACCA ACTTTGTAAG CACCGTTGCA ATAAGCACAA TGAATATTAG CTTGTTGTTT 241 AAAGCCAAGA GGGTCAAAGG GGTCTTTATC AAGTTCCCTC ATTCGACTCG TAGCCAATTG 301 ATACTTGGTT ACGTACTCCT CATCCGCCGC ATGAGCAGGG GGGCGGATGC GGAGTTTAGT 361 CATAGAAGGG AACTTGTAGT ACGGAACACT ATCGATATCA TCGGGTACAG GAGGGCAACA 421 ACTGTATATT ACATCAACAC CTTCTTTTAC ATGGGCAGTA CCACAAGACT TGAGATCAGG 481 AGGTGGTATA GGTGCAGCAG TCGCTAATGG TGCAAGATTA GCTGCACCAT AAAGACCTCC 541 TAACCCTAAA AGAACGTTTC GTCTATCAAC AGCGTCAGGG TTTTTGTCAA CGTTGTTTGC 601 GTTGCATGAA ACCTTGAAAC TTTGATTACG CCTTCCGTGG AGGAAAAGTT GAGAGGGTTT 661 TGATAACAAG GATGAGTTGG TGGTGGTGAA GGAAGAAGAG AGGGATTTGT TGGTGCATAA 721 AGGAAGAGTA GTAGTAATAG AAGAAGAAGA AGACCCT Predicted gene structure (within gDNA segment 15575 to 17568): Exon 1 16185 16938 ( 754 n); cDNA 1 754 ( 754 n); score: 0.993 MATCH C08HBa0336I24.1+ SGN-E317780- 0.993 754 0.996 C PGS_C08HBa0336I24.1+_SGN-E317780- (16185 16938) Alignment (genomic DNA sequence = upper lines): AAGAGATGAT CCCTCACGAT CAAACATGGG AGGTATACGC ATGCCTTTTG GATGATCCCA 16244 |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| ||||||| || AAGAGATGAT CCCTCACGAT CAAGCATGGG AGGTATACGC ATGCCTTTTG GATGATCGCA 60 ATTCCAGTAA GGTAAAGCAA AAGTTGGATC ATTAATAAGT GATCCCAAAA TTCTTTCGTA 16304 ||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCCAGTAA GGTAGAGCAA AAGTTGGATC ATTAATAAGT GATCCCAAAA TTCTTTCGTA 120 AAAGTACAAG TACCATCTAT GAAAGGGAAA GAAAAGCCAC GAGAAATGAA CTTGCAATTC 16364 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGTACAAG TACCATCTAT GAAAGGGAAA GAAAAGCCAC GAGAAATGAA CTTGCAATTC 180 TTTACCACCA ACTTTGTAAG CACCGTTGCA ATAAGCACAA TGAATATTAG CTTGTTGTTT 16424 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTACCACCA ACTTTGTAAG CACCGTTGCA ATAAGCACAA TGAATATTAG CTTGTTGTTT 240 AAAGCCAAGA GGGTCAAAGG GGTCTTTATC AAGTTCCCTC ATTCGACTCG TAGCCAATTG 16484 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGCCAAGA GGGTCAAAGG GGTCTTTATC AAGTTCCCTC ATTCGACTCG TAGCCAATTG 300 ATACTTGGCT ACGTACTCCT CATCCGCCGC ATGAGCAGGG GGGCGGATGC GGAGTTTAGT 16544 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATACTTGGTT ACGTACTCCT CATCCGCCGC ATGAGCAGGG GGGCGGATGC GGAGTTTAGT 360 CATAGAAGGG AACTTGTAGT ACGGAACACT ATCGATATCA TCGGGTACAG GAGGGCAACA 16604 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATAGAAGGG AACTTGTAGT ACGGAACACT ATCGATATCA TCGGGTACAG GAGGGCAACA 420 ACTGTATATT ACATCAACAC CTTCTTTTAC ATGGGCAGTA CCACAAGACT TGAGATCAGG 16664 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTGTATATT ACATCAACAC CTTCTTTTAC ATGGGCAGTA CCACAAGACT TGAGATCAGG 480 AGGTGGTATA GGTGCAGCAG TCGCTAATGG TGCAAGATTA GCTGCACCAT AAAGACCTCC 16724 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGTGGTATA GGTGCAGCAG TCGCTAATGG TGCAAGATTA GCTGCACCAT AAAGACCTCC 540 TAACCCTAAA AGAACGTTTC GTCTATCAAC AGCGTCAGGG TTTTTGTCAA CGTTGTTTGC 16784 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAACCCTAAA AGAACGTTTC GTCTATCAAC AGCGTCAGGG TTTTTGTCAA CGTTGTTTGC 600 GTTGCATGAA ACCTTGAAAC TTTGATTACG CCTTCCGTGG AGGAAAAGTT GAGAGGGTTT 16844 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGCATGAA ACCTTGAAAC TTTGATTACG CCTTCCGTGG AGGAAAAGTT GAGAGGGTTT 660 TGATAACAAG GATGAGTTGG TGGTGGTGAA GGAAGAAGAG AGGGATTTGT TGGTGCATAA 16904 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATAACAAG GATGAGTTGG TGGTGGTGAA GGAAGAAGAG AGGGATTTGT TGGTGCATAA 720 AGGAAGAGTA GTAGTAATAG AAGAAGAAGA AGAC 16938 |||||||||| |||||||||| |||||||||| |||| AGGAAGAGTA GTAGTAATAG AAGAAGAAGA AGAC 754 hqPGS_C08HBa0336I24.1+_SGN-E317780- (16185 16938) ******************************************************************************** EST sequence 212 -strand 734 n (File: SGN-E318091-) 1 CGATCAAACA TGGGAGGTAT ACGCATACCT TTTGGATGAT CCCAATTCCA GTAAGGTAAA 61 GCAAAAGTTG GATCATTAAT AAGTGACCCC AATATCCTTT CGTAAAAGTA CAAGTACCAT 121 CTATGGAACG GAAAGAAAAG CCACGAGAAA TGAACTTGCA ATTCTTTACC ACCAATTTTA 181 TAAGCACCGT TACAATAAGC ACAATGAATA TTAGCTTGTT GTTTAAACCC AAGAGGGTCA 241 AAAGGGTCTT TATCAAGTTC CCTCATTCGA CTTGTAGCCA ATTGATACTT GGCTACGTAC 301 TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT TCGTCATAGG AGGGAACTTG 361 TAGTACGGAA CGCTATCGAT ATCATCAGGT ACAGGAGGGC AACAACTGTA TGAGACTTCA 421 GTACCTTTAT CATCTATATG GGCAACACCA CAAGATTTGA GATCAGGTGG TGGTATAGGA 481 GCAGCAGAGG CTAATGGTGC AAGATTAGCT GCACCATAAA AACCTCCTAA CCCTAAAAGA 541 ACATTTCTCC TATCAACAGC GTCAAGGTTT TTGTCATGCT CGCCAACGTT GCATGAAACC 601 TTGAAACTTT GACAGCGCCT TCCATGGAGG AAAGGTTGAG AGGGTTTTGA TAAGAAAGTA 661 GAGTGGTTGT TGGTGAAGGG AGAAGAGAGG GATTTGTTGG TGGATAATAA AGGAAGAGTA 721 TTAGGAGTAG AAGA Predicted gene structure (within gDNA segment 15591 to 19259): Exon 1 16201 16931 ( 731 n); cDNA 1 734 ( 734 n); score: 0.895 MATCH C08HBa0336I24.1+ SGN-E318091- 0.895 731 0.996 C PGS_C08HBa0336I24.1+_SGN-E318091- (16201 16931) Alignment (genomic DNA sequence = upper lines): CGATCAAACA TGGGAGGTAT ACGCATGCCT TTTGGATGAT CCCAATTCCA GTAAGGTAAA 16260 |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| CGATCAAACA TGGGAGGTAT ACGCATACCT TTTGGATGAT CCCAATTCCA GTAAGGTAAA 60 GCAAAAGTTG GATCATTAAT AAGTGATCCC AAAATTCTTT CGTAAAAGTA CAAGTACCAT 16320 |||||||||| |||||||||| |||||| ||| || || |||| |||||||||| |||||||||| GCAAAAGTTG GATCATTAAT AAGTGACCCC AATATCCTTT CGTAAAAGTA CAAGTACCAT 120 CTATGAAAGG GAAAGAAAAG CCACGAGAAA TGAACTTGCA ATTCTTTACC ACCAACTTTG 16380 ||||| || | |||||||||| |||||||||| |||||||||| |||||||||| ||||| ||| CTATGGAACG GAAAGAAAAG CCACGAGAAA TGAACTTGCA ATTCTTTACC ACCAATTTTA 180 TAAGCACCGT TGCAATAAGC ACAATGAATA TTAGCTTGTT GTTTAAAGCC AAGAGGGTCA 16440 |||||||||| | |||||||| |||||||||| |||||||||| ||||||| || |||||||||| TAAGCACCGT TACAATAAGC ACAATGAATA TTAGCTTGTT GTTTAAACCC AAGAGGGTCA 240 AAGGGGTCTT TATCAAGTTC CCTCATTCGA CTCGTAGCCA ATTGATACTT GGCTACGTAC 16500 || ||||||| |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| AAAGGGTCTT TATCAAGTTC CCTCATTCGA CTTGTAGCCA ATTGATACTT GGCTACGTAC 300 TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT TAGTCATAGA AGGGAACTTG 16560 |||||||||| |||||||||| |||||||||| |||||||||| | ||||||| |||||||||| TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT TCGTCATAGG AGGGAACTTG 360 TAGTACGGAA CACTATCGAT ATCATCGGGT ACAGGAGGGC AACAACTGTA TATTACATCA 16620 |||||||||| | |||||||| |||||| ||| |||||||||| |||||||||| | || ||| TAGTACGGAA CGCTATCGAT ATCATCAGGT ACAGGAGGGC AACAACTGTA TGAGACTTCA 420 ACACC--T-T CTTTTACATG GGCAGTACCA CAAGACTTGA GATCAGGAGG TGGTATAGGT 16677 ||| | | | | || ||| |||| |||| ||||| |||| ||||||| || ||||||||| GTACCTTTAT CATCTATATG GGCAACACCA CAAGATTTGA GATCAGGTGG TGGTATAGGA 480 GCAGCAGTCG CTAATGGTGC AAGATTAGCT GCACCATAAA GACCTCCTAA CCCTAAAAGA 16737 ||||||| | |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| GCAGCAGAGG CTAATGGTGC AAGATTAGCT GCACCATAAA AACCTCCTAA CCCTAAAAGA 540 ACGTTTCGTC TATCAACAGC GTCAGGGTTT TTGTCAACGT TGTTTGCGTT GCATGAAACC 16797 || |||| | |||||||||| |||| ||||| |||||| | | |||| |||||||||| ACATTTCTCC TATCAACAGC GTCAAGGTTT TTGTCATGCT CGCCAACGTT GCATGAAACC 600 TTGAAACTTT GATTACGCCT TCCGTGGAGG AAAAGTTGAG AGGGTTTTGA TAACAAGGAT 16857 |||||||||| || ||||| ||| |||||| ||| |||||| |||||||||| ||| || | TTGAAACTTT GACAGCGCCT TCCATGGAGG AAAGGTTGAG AGGGTTTTGA TAAGAAAGTA 660 GAGTTGGTGG TGGTGAAGGA AGAAGAGAGG GATTTGTTGG TGCATAAAGG AAGAGTAGTA 16917 |||| | || ||||||||| |||||||||| |||||||||| || |||| | || |||| GAGTGGTTGT TGGTGAAGGG AGAAGAGAGG GATTTGTTGG TGGATAATAA AGGAAGAGTA 720 GTAATAGAAG AAGA 16931 || || || |||| TTAGGAGTAG AAGA 734 hqPGS_C08HBa0336I24.1+_SGN-E318091- (16201 16931) ******************************************************************************** EST sequence 209 -strand 727 n (File: SGN-E329018-) 1 ATCAAACATG GGAGGTATAC GCATACCTTT TGATGATCCC AATTCCAGTA AGGTAAAGCA 61 AAAGTTGGAT CATTAATAAG TGACCCCAAT ATCCTTTCGT AAAAGTACAA GTACCATCTA 121 TGGAACGGAA AGAAAAGCCA CGAGAAATGA ACTTGCAATT CTTTACCACC AATTTNATAA 181 GCACCGTTAC AATAAGCACA ATGAATATTA GCTTGTTGTT TAAACCCAAG AGGGTCAAAA 241 GGGTCTTTAT CAAGTTCCCT CATTCGACTT GTAGCCAATT GATACTTGGC TACGTACTCC 301 TCATCCGCCG CATGAGCAGG GGGGCGGATG CGGAGTTTCG TCATAGGAGG GAACTTGTAG 361 TACGGAACGC TATCGATATC ATCAGGTACA GGAGGGCAAC AACTGTATGA GACTTCAGTA 421 CCTTTATCAT CTATATGGGC AACACCACAA GATTTGAGAT CAGGTGGTGG TATAGGAGCA 481 GCAGAGGCTA ATGGTGCAAG ATTAGCTGCA CCATAAAAAC CTCCTAACCC TAAAAGAACA 541 TTTCTCCTAT CAACAGCGTC AAGGTTTTTG TCATGCTCGC CAACGTTGCA TGAAACCTTG 601 AAACTTTGAC AGCGCCTTCC ATGGAGGAAA GGTTGAGAGG GTTTTGATAA GAAAGTAGAG 661 TGGTTGTTGG TGAAGGGAGA AGAGAGGGAT TTGTTGGTGG ATAATAAAGG AAGAGTATTA 721 GGAGTAG Predicted gene structure (within gDNA segment 15593 to 19219): Exon 1 16203 16927 ( 725 n); cDNA 1 727 ( 727 n); score: 0.892 MATCH C08HBa0336I24.1+ SGN-E329018- 0.892 725 0.997 C PGS_C08HBa0336I24.1+_SGN-E329018- (16203 16927) Alignment (genomic DNA sequence = upper lines): ATCAAACATG GGAGGTATAC GCATGCCTTT TGGATGATCC CAATTCCAGT AAGGTAAAGC 16262 |||||||||| |||||||||| |||| ||||| | |||||||| |||||||||| |||||||||| ATCAAACATG GGAGGTATAC GCATACCTTT T-GATGATCC CAATTCCAGT AAGGTAAAGC 59 AAAAGTTGGA TCATTAATAA GTGATCCCAA AATTCTTTCG TAAAAGTACA AGTACCATCT 16322 |||||||||| |||||||||| |||| ||||| || |||||| |||||||||| |||||||||| AAAAGTTGGA TCATTAATAA GTGACCCCAA TATCCTTTCG TAAAAGTACA AGTACCATCT 119 ATGAAAGGGA AAGAAAAGCC ACGAGAAATG AACTTGCAAT TCTTTACCAC CAACTTTGTA 16382 ||| || ||| |||||||||| |||||||||| |||||||||| |||||||||| ||| || || ATGGAACGGA AAGAAAAGCC ACGAGAAATG AACTTGCAAT TCTTTACCAC CAATTTNATA 179 AGCACCGTTG CAATAAGCAC AATGAATATT AGCTTGTTGT TTAAAGCCAA GAGGGTCAAA 16442 ||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| AGCACCGTTA CAATAAGCAC AATGAATATT AGCTTGTTGT TTAAACCCAA GAGGGTCAAA 239 GGGGTCTTTA TCAAGTTCCC TCATTCGACT CGTAGCCAAT TGATACTTGG CTACGTACTC 16502 ||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| AGGGTCTTTA TCAAGTTCCC TCATTCGACT TGTAGCCAAT TGATACTTGG CTACGTACTC 299 CTCATCCGCC GCATGAGCAG GGGGGCGGAT GCGGAGTTTA GTCATAGAAG GGAACTTGTA 16562 |||||||||| |||||||||| |||||||||| ||||||||| ||||||| || |||||||||| CTCATCCGCC GCATGAGCAG GGGGGCGGAT GCGGAGTTTC GTCATAGGAG GGAACTTGTA 359 GTACGGAACA CTATCGATAT CATCGGGTAC AGGAGGGCAA CAACTGTATA TTACATCAAC 16622 ||||||||| |||||||||| |||| ||||| |||||||||| ||||||||| || ||| GTACGGAACG CTATCGATAT CATCAGGTAC AGGAGGGCAA CAACTGTATG AGACTTCAGT 419 ACC--T-TCT TTTACATGGG CAGTACCACA AGACTTGAGA TCAGGAGGTG GTATAGGTGC 16679 ||| | || | || ||||| || |||||| ||| |||||| ||||| |||| ||||||| || ACCTTTATCA TCTATATGGG CAACACCACA AGATTTGAGA TCAGGTGGTG GTATAGGAGC 479 AGCAGTCGCT AATGGTGCAA GATTAGCTGC ACCATAAAGA CCTCCTAACC CTAAAAGAAC 16739 ||||| ||| |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| AGCAGAGGCT AATGGTGCAA GATTAGCTGC ACCATAAAAA CCTCCTAACC CTAAAAGAAC 539 GTTTCGTCTA TCAACAGCGT CAGGGTTTTT GTCAACGTTG TTTGCGTTGC ATGAAACCTT 16799 |||| ||| |||||||||| || ||||||| |||| | | |||||| |||||||||| ATTTCTCCTA TCAACAGCGT CAAGGTTTTT GTCATGCTCG CCAACGTTGC ATGAAACCTT 599 GAAACTTTGA TTACGCCTTC CGTGGAGGAA AAGTTGAGAG GGTTTTGATA ACAAGGATGA 16859 |||||||||| ||||||| | |||||||| | |||||||| |||||||||| | || | || GAAACTTTGA CAGCGCCTTC CATGGAGGAA AGGTTGAGAG GGTTTTGATA AGAAAGTAGA 659 GTTGGTGGTG GTGAAGGAAG AAGAGAGGGA TTTGTTGGTG CATAAAGGAA GAGTAGTAGT 16919 || | || || ||||||| || |||||||||| |||||||||| |||| | || |||| | GTGGTTGTTG GTGAAGGGAG AAGAGAGGGA TTTGTTGGTG GATAATAAAG GAAGAGTATT 719 AATAGAAG 16927 | || || AGGAGTAG 727 hqPGS_C08HBa0336I24.1+_SGN-E329018- (16203 16927) ******************************************************************************** EST sequence 151 -strand 720 n (File: SGN-E316433-) 1 ATCAAACATG GGAGGTATAC GCATGCCTTT TGGATGATCC CAATCCCAGT AAGGTAAAGC 61 AAAAGTTGGA TCATTAATAA GTGATCCCAA AATTCTTTCG TAAAAGTACA AGTACCATCT 121 ATGAAAGGGA AAGAAAAGCC ACGAGAAATG AACTTGCAAT TCTTTACCAC CAACTTTGTA 181 AGCACCGTTG CAATAAGCAC AATGAATATT AGCTTGTTGT TTAAAGCCAA GAGGGTCAAA 241 GGGGTCTTTA TCAAGTTCCC TCATTCGACT CGTAGCCAAT TGATACTTGG CTACGTACTC 301 CTCATCCGCC GCATGAGCAG GGGGGCGGAT GCGGAGTTTA GTCATAGAAG GGAACTTGTA 361 GTACGGAACA CTATCGATAT CATCGGGTAC AGGAGGGCAA CAACTGTATA TTACATCAAC 421 ACCTTCTTTT ACATGGGCAG TACCACAAGA CTTGAGATCA GGAGGTGGTA TAGGTGCAGC 481 AGTCGCTAAT GGTGCAAGAT TAGCTGCACC ATAAAGACCT CCTAACCCTA AAAGAACGTT 541 TCGTCTATCA ACAGCGTCAG GGTTTTTGTC AACGTTGTTT GCGTTGCATG AAACCTTGAA 601 ACTTTGATTA CGCCTTCCGT GGAGGAAAAG TTGAGAGGGT TTTGATAACA AGGATGAGTT 661 GGTGGTGGTG AAGGAAGAAG AGAGGGATTT GTTGGTGCAT AAAGGAAGAG TAGTAGTAAT Predicted gene structure (within gDNA segment 15593 to 17522): Exon 1 16203 16922 ( 720 n); cDNA 1 720 ( 720 n); score: 0.999 MATCH C08HBa0336I24.1+ SGN-E316433- 0.999 720 1.000 C PGS_C08HBa0336I24.1+_SGN-E316433- (16203 16922) Alignment (genomic DNA sequence = upper lines): ATCAAACATG GGAGGTATAC GCATGCCTTT TGGATGATCC CAATTCCAGT AAGGTAAAGC 16262 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| ATCAAACATG GGAGGTATAC GCATGCCTTT TGGATGATCC CAATCCCAGT AAGGTAAAGC 60 AAAAGTTGGA TCATTAATAA GTGATCCCAA AATTCTTTCG TAAAAGTACA AGTACCATCT 16322 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAGTTGGA TCATTAATAA GTGATCCCAA AATTCTTTCG TAAAAGTACA AGTACCATCT 120 ATGAAAGGGA AAGAAAAGCC ACGAGAAATG AACTTGCAAT TCTTTACCAC CAACTTTGTA 16382 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGAAAGGGA AAGAAAAGCC ACGAGAAATG AACTTGCAAT TCTTTACCAC CAACTTTGTA 180 AGCACCGTTG CAATAAGCAC AATGAATATT AGCTTGTTGT TTAAAGCCAA GAGGGTCAAA 16442 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCACCGTTG CAATAAGCAC AATGAATATT AGCTTGTTGT TTAAAGCCAA GAGGGTCAAA 240 GGGGTCTTTA TCAAGTTCCC TCATTCGACT CGTAGCCAAT TGATACTTGG CTACGTACTC 16502 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGGTCTTTA TCAAGTTCCC TCATTCGACT CGTAGCCAAT TGATACTTGG CTACGTACTC 300 CTCATCCGCC GCATGAGCAG GGGGGCGGAT GCGGAGTTTA GTCATAGAAG GGAACTTGTA 16562 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCATCCGCC GCATGAGCAG GGGGGCGGAT GCGGAGTTTA GTCATAGAAG GGAACTTGTA 360 GTACGGAACA CTATCGATAT CATCGGGTAC AGGAGGGCAA CAACTGTATA TTACATCAAC 16622 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTACGGAACA CTATCGATAT CATCGGGTAC AGGAGGGCAA CAACTGTATA TTACATCAAC 420 ACCTTCTTTT ACATGGGCAG TACCACAAGA CTTGAGATCA GGAGGTGGTA TAGGTGCAGC 16682 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTTCTTTT ACATGGGCAG TACCACAAGA CTTGAGATCA GGAGGTGGTA TAGGTGCAGC 480 AGTCGCTAAT GGTGCAAGAT TAGCTGCACC ATAAAGACCT CCTAACCCTA AAAGAACGTT 16742 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTCGCTAAT GGTGCAAGAT TAGCTGCACC ATAAAGACCT CCTAACCCTA AAAGAACGTT 540 TCGTCTATCA ACAGCGTCAG GGTTTTTGTC AACGTTGTTT GCGTTGCATG AAACCTTGAA 16802 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGTCTATCA ACAGCGTCAG GGTTTTTGTC AACGTTGTTT GCGTTGCATG AAACCTTGAA 600 ACTTTGATTA CGCCTTCCGT GGAGGAAAAG TTGAGAGGGT TTTGATAACA AGGATGAGTT 16862 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTTGATTA CGCCTTCCGT GGAGGAAAAG TTGAGAGGGT TTTGATAACA AGGATGAGTT 660 GGTGGTGGTG AAGGAAGAAG AGAGGGATTT GTTGGTGCAT AAAGGAAGAG TAGTAGTAAT 16922 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGGTGGTG AAGGAAGAAG AGAGGGATTT GTTGGTGCAT AAAGGAAGAG TAGTAGTAAT 720 hqPGS_C08HBa0336I24.1+_SGN-E316433- (16203 16922) ******************************************************************************** EST sequence 228 -strand 714 n (File: SGN-E314991-) 1 GGAGGTATAC GCATACTTTT TGGATGATCC CAATCCCAGT AAGGTAAAGC AAAAGTTGGA 61 TCATTAATAA GTGACNNCAA TATCCTTTCG TAAAAGTACA AGTACCATCT ATGGAACGGA 121 AAGAAAAGCC ACGAGAAATG AACTTGCAAT TCTTTACCAC CAATTTTATA AGCACCGTTA 181 CAATAAGCAC AATGAATATT AGCTTGTTGT TTAAACCCAA GAGGGTCAAA AGGGTCTTTA 241 TCAAGTTCCC TCATTCGACT TGTAGCCAAT TGATACTTGG CTACGTACTC CTCATCCGCC 301 GCATGAGCAG GGGGGCGGAT GCGGAGTTTC GTCATAGGAG GGAACTTGTA GTACGGAACG 361 CTATCGATAT CATCAGGTAC AGGAGGGCAA CAACTGTATG AGACTTCAGT ACCTTTATCA 421 TCTATATGGG CAACACCACA AGATTTGAGA TCAGGTGGTG GTATAGGAGC AGCAGAGGCT 481 AATGGTGCAA GATTAGCTGC ACCATAAAAA CCTCCTAACC CTAAAAGAAC ATTTCTCCTA 541 TCAACAGCGT CAAGGTTTTT GTCATGCTCG CCAACGTTGC ATGAAACCTT GAAACTTTGA 601 CAGCGCCTTC CATGGAGGAA AGGTTGAGAG GGTTTTGATA AGAAAGTAGA GTGGTTGTTG 661 GTGAAGGGAG AAGAGAGGGA TTTGTTGGTG GATAATAAAG GAAGAGTATT AGGA Predicted gene structure (within gDNA segment 15450 to 19179): Exon 1 16213 16920 ( 708 n); cDNA 1 711 ( 711 n); score: 0.891 MATCH C08HBa0336I24.1+ SGN-E314991- 0.891 708 0.992 C PGS_C08HBa0336I24.1+_SGN-E314991- (16213 16920) Alignment (genomic DNA sequence = upper lines): GGAGGTATAC GCATGCCTTT TGGATGATCC CAATTCCAGT AAGGTAAAGC AAAAGTTGGA 16272 |||||||||| |||| | ||| |||||||||| |||| ||||| |||||||||| |||||||||| GGAGGTATAC GCATACTTTT TGGATGATCC CAATCCCAGT AAGGTAAAGC AAAAGTTGGA 60 TCATTAATAA GTGATCCCAA AATTCTTTCG TAAAAGTACA AGTACCATCT ATGAAAGGGA 16332 |||||||||| |||| ||| || |||||| |||||||||| |||||||||| ||| || ||| TCATTAATAA GTGACNNCAA TATCCTTTCG TAAAAGTACA AGTACCATCT ATGGAACGGA 120 AAGAAAAGCC ACGAGAAATG AACTTGCAAT TCTTTACCAC CAACTTTGTA AGCACCGTTG 16392 |||||||||| |||||||||| |||||||||| |||||||||| ||| ||| || ||||||||| AAGAAAAGCC ACGAGAAATG AACTTGCAAT TCTTTACCAC CAATTTTATA AGCACCGTTA 180 CAATAAGCAC AATGAATATT AGCTTGTTGT TTAAAGCCAA GAGGGTCAAA GGGGTCTTTA 16452 |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| ||||||||| CAATAAGCAC AATGAATATT AGCTTGTTGT TTAAACCCAA GAGGGTCAAA AGGGTCTTTA 240 TCAAGTTCCC TCATTCGACT CGTAGCCAAT TGATACTTGG CTACGTACTC CTCATCCGCC 16512 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| TCAAGTTCCC TCATTCGACT TGTAGCCAAT TGATACTTGG CTACGTACTC CTCATCCGCC 300 GCATGAGCAG GGGGGCGGAT GCGGAGTTTA GTCATAGAAG GGAACTTGTA GTACGGAACA 16572 |||||||||| |||||||||| ||||||||| ||||||| || |||||||||| ||||||||| GCATGAGCAG GGGGGCGGAT GCGGAGTTTC GTCATAGGAG GGAACTTGTA GTACGGAACG 360 CTATCGATAT CATCGGGTAC AGGAGGGCAA CAACTGTATA TTACATCAAC ACC--T-TCT 16629 |||||||||| |||| ||||| |||||||||| ||||||||| || ||| ||| | || CTATCGATAT CATCAGGTAC AGGAGGGCAA CAACTGTATG AGACTTCAGT ACCTTTATCA 420 TTTACATGGG CAGTACCACA AGACTTGAGA TCAGGAGGTG GTATAGGTGC AGCAGTCGCT 16689 | || ||||| || |||||| ||| |||||| ||||| |||| ||||||| || ||||| ||| TCTATATGGG CAACACCACA AGATTTGAGA TCAGGTGGTG GTATAGGAGC AGCAGAGGCT 480 AATGGTGCAA GATTAGCTGC ACCATAAAGA CCTCCTAACC CTAAAAGAAC GTTTCGTCTA 16749 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| |||| ||| AATGGTGCAA GATTAGCTGC ACCATAAAAA CCTCCTAACC CTAAAAGAAC ATTTCTCCTA 540 TCAACAGCGT CAGGGTTTTT GTCAACGTTG TTTGCGTTGC ATGAAACCTT GAAACTTTGA 16809 |||||||||| || ||||||| |||| | | |||||| |||||||||| |||||||||| TCAACAGCGT CAAGGTTTTT GTCATGCTCG CCAACGTTGC ATGAAACCTT GAAACTTTGA 600 TTACGCCTTC CGTGGAGGAA AAGTTGAGAG GGTTTTGATA ACAAGGATGA GTTGGTGGTG 16869 ||||||| | |||||||| | |||||||| |||||||||| | || | || || | || || CAGCGCCTTC CATGGAGGAA AGGTTGAGAG GGTTTTGATA AGAAAGTAGA GTGGTTGTTG 660 GTGAAGGAAG AAGAGAGGGA TTTGTTGGTG CATAAAGGAA GAGTAGTAGT A 16920 ||||||| || |||||||||| |||||||||| |||| | || |||| | | GTGAAGGGAG AAGAGAGGGA TTTGTTGGTG GATAATAAAG GAAGAGTATT A 711 hqPGS_C08HBa0336I24.1+_SGN-E314991- (16213 16920) ******************************************************************************** EST sequence 165 -strand 722 n (File: SGN-E339959-) 1 GGTATACGCA TACCTTTTGG ATGATCCCAA TTCCAGTAAG GTAAAGCAAA AGTTGGATCA 61 TTAATAAGTG ACCCAAATAT CCTTTCGTAA AAGTACAAGT ACCATCTATG GAACGGAAAG 121 AAAAGCCACG AGAAATGAAC TTGCAATTCT TTACCACCAA TTTTATAAGC ACCGTTACAA 181 TAAGCACAAT GAATATTAGC TTGTTGTTTA AACCCAAGAG GGTCAAAAGG GTCTTTATCA 241 AGTTCCCTCA TTCGACTTGT AGCCAATTGA TACTTGGCTA CGTACTCCTC ATCCGCCGCA 301 TGAGCAGGGG GGCGGATGCG GAGTTTCGTC ATAGGAGGGA ACTTGTAGTA CGGAACGCTA 361 TCGATATCAT CAGGTACAGG AGGGCAACAA CTGTATGAGA CTTCAGTACC TTTATCATCT 421 ATATGGGCAA CACCACAAGA TTTGAGATCA GGTGGTGGTA TAGGAGCAGC AGAGGCTAAT 481 GGTGCAAGAT TAGCTGCACC ATAAAAACCT CCTAACCCTA AAAGAACATT TCTCCTATCA 541 ACAGCGTCAA GGTTTTTGTC ATGCTCGCCA ACGTTGCATG AAACCTTGAA ACTTTGACAG 601 CGCCTTCCAT GGAGGAAAGG TTGAGAGGGT TTTGATAAGA AAGTAGAGTG GTTGTTGGTG 661 AAGGGAGAAG AGAGGGATTT GTTGGTGGAT AATAAAGGAA GAGTATTAGG AGTAGAAGAA 721 GA Predicted gene structure (within gDNA segment 15498 to 19289): Exon 1 16216 16934 ( 719 n); cDNA 1 722 ( 722 n); score: 0.892 MATCH C08HBa0336I24.1+ SGN-E339959- 0.892 719 0.996 C PGS_C08HBa0336I24.1+_SGN-E339959- (16216 16934) Alignment (genomic DNA sequence = upper lines): GGTATACGCA TGCCTTTTGG ATGATCCCAA TTCCAGTAAG GTAAAGCAAA AGTTGGATCA 16275 |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTATACGCA TACCTTTTGG ATGATCCCAA TTCCAGTAAG GTAAAGCAAA AGTTGGATCA 60 TTAATAAGTG ATCCCAAAAT TCTTTCGTAA AAGTACAAGT ACCATCTATG AAAGGGAAAG 16335 |||||||||| | || || || ||||||||| |||||||||| |||||||||| || |||||| TTAATAAGTG ACCCAAATAT CCTTTCGTAA AAGTACAAGT ACCATCTATG GAACGGAAAG 120 AAAAGCCACG AGAAATGAAC TTGCAATTCT TTACCACCAA CTTTGTAAGC ACCGTTGCAA 16395 |||||||||| |||||||||| |||||||||| |||||||||| ||| ||||| |||||| ||| AAAAGCCACG AGAAATGAAC TTGCAATTCT TTACCACCAA TTTTATAAGC ACCGTTACAA 180 TAAGCACAAT GAATATTAGC TTGTTGTTTA AAGCCAAGAG GGTCAAAGGG GTCTTTATCA 16455 |||||||||| |||||||||| |||||||||| || ||||||| ||||||| || |||||||||| TAAGCACAAT GAATATTAGC TTGTTGTTTA AACCCAAGAG GGTCAAAAGG GTCTTTATCA 240 AGTTCCCTCA TTCGACTCGT AGCCAATTGA TACTTGGCTA CGTACTCCTC ATCCGCCGCA 16515 |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| AGTTCCCTCA TTCGACTTGT AGCCAATTGA TACTTGGCTA CGTACTCCTC ATCCGCCGCA 300 TGAGCAGGGG GGCGGATGCG GAGTTTAGTC ATAGAAGGGA ACTTGTAGTA CGGAACACTA 16575 |||||||||| |||||||||| |||||| ||| |||| ||||| |||||||||| |||||| ||| TGAGCAGGGG GGCGGATGCG GAGTTTCGTC ATAGGAGGGA ACTTGTAGTA CGGAACGCTA 360 TCGATATCAT CGGGTACAGG AGGGCAACAA CTGTATATTA CATCAACACC --T-TCTTTT 16632 |||||||||| | |||||||| |||||||||| |||||| | | ||| ||| | || | | TCGATATCAT CAGGTACAGG AGGGCAACAA CTGTATGAGA CTTCAGTACC TTTATCATCT 420 ACATGGGCAG TACCACAAGA CTTGAGATCA GGAGGTGGTA TAGGTGCAGC AGTCGCTAAT 16692 | ||||||| ||||||||| ||||||||| || ||||||| |||| ||||| || |||||| ATATGGGCAA CACCACAAGA TTTGAGATCA GGTGGTGGTA TAGGAGCAGC AGAGGCTAAT 480 GGTGCAAGAT TAGCTGCACC ATAAAGACCT CCTAACCCTA AAAGAACGTT TCGTCTATCA 16752 |||||||||| |||||||||| ||||| |||| |||||||||| ||||||| || || |||||| GGTGCAAGAT TAGCTGCACC ATAAAAACCT CCTAACCCTA AAAGAACATT TCTCCTATCA 540 ACAGCGTCAG GGTTTTTGTC AACGTTGTTT GCGTTGCATG AAACCTTGAA ACTTTGATTA 16812 ||||||||| |||||||||| | | | ||||||||| |||||||||| ||||||| ACAGCGTCAA GGTTTTTGTC ATGCTCGCCA ACGTTGCATG AAACCTTGAA ACTTTGACAG 600 CGCCTTCCGT GGAGGAAAAG TTGAGAGGGT TTTGATAACA AGGATGAGTT GGTGGTGGTG 16872 |||||||| | |||||||| | |||||||||| |||||||| | | | |||| | || ||||| CGCCTTCCAT GGAGGAAAGG TTGAGAGGGT TTTGATAAGA AAGTAGAGTG GTTGTTGGTG 660 AAGGAAGAAG AGAGGGATTT GTTGGTGCAT AAAGGAAGAG TAGTAGTAAT AGAAGAAGAA 16932 |||| ||||| |||||||||| ||||||| || || | || |||| || || ||||||| AAGGGAGAAG AGAGGGATTT GTTGGTGGAT AATAAAGGAA GAGTATTAGG AGTAGAAGAA 720 GA 16934 || GA 722 hqPGS_C08HBa0336I24.1+_SGN-E339959- (16216 16934) ******************************************************************************** EST sequence 221 -strand 719 n (File: SGN-E317913-) 1 GTATACGCAT ACCTTTTGGA TGATCCCAAT CCCAGTAAGG TAAAGCAAAA GTTGGATCAT 61 TAATAAGTGA CCCCAATATC CTTTCGTAAA AGTACAAGTA CCATCTATGG AACGGAAAGA 121 AAAGCCACGA GAAATGAACT TGCAATTCTT TACCACCAAT TTTATAAGCA CCGTTACAAT 181 AAGCACAATG AATATTAGCT TGTTGTTTAA ACCCAAGAGG GTCAAAAGGG TCTTTATCAA 241 GTTCCCTCAT TCGACTTGTA GCCAATTGAT ACTTGGCTAC GTACTCCTCA TCCGCCGCAT 301 GAGCAGGGGG GCGGATGCGG AGTTTCGTCA TAGGAGGGAA CTTGTAGTAC GGAACGCTAT 361 CGATATCATC AGGTACAGGA GGGCAACAAC TGTATGAGAC TTCAGTACCT TTATCATCTA 421 TATGGGCAAC ACCACAAGAT TTGAGATCAG GTGGTGGTAT AGGAGCAGCA GAGGCTAATG 481 GTGCAAGATT AGCTGCACCA TAAAAACCTC CTAACCCTAA AAGAACATTT CTCCTATCAA 541 CAGCGTCAAG GTTTTTGTCA TGCTCGCCAA CGTTGCATGA AACCTTGAAA CTTTGACAGC 601 GCCTTCCATG GAGGAAAGGT TGAGAGGGTT TTGATAAGAA AGTAGAGTGG TTGTTGGTGA 661 AGGGAGAAGA GAGGGATTTG TTGGTGGATA ATAAAGGAAG AGTATTAGGA GTAGAAGAA Predicted gene structure (within gDNA segment 15508 to 19269): Exon 1 16217 16932 ( 716 n); cDNA 1 719 ( 719 n); score: 0.892 MATCH C08HBa0336I24.1+ SGN-E317913- 0.892 716 0.996 C PGS_C08HBa0336I24.1+_SGN-E317913- (16217 16932) Alignment (genomic DNA sequence = upper lines): GTATACGCAT GCCTTTTGGA TGATCCCAAT TCCAGTAAGG TAAAGCAAAA GTTGGATCAT 16276 |||||||||| ||||||||| |||||||||| ||||||||| |||||||||| |||||||||| GTATACGCAT ACCTTTTGGA TGATCCCAAT CCCAGTAAGG TAAAGCAAAA GTTGGATCAT 60 TAATAAGTGA TCCCAAAATT CTTTCGTAAA AGTACAAGTA CCATCTATGA AAGGGAAAGA 16336 |||||||||| ||||| || |||||||||| |||||||||| ||||||||| || ||||||| TAATAAGTGA CCCCAATATC CTTTCGTAAA AGTACAAGTA CCATCTATGG AACGGAAAGA 120 AAAGCCACGA GAAATGAACT TGCAATTCTT TACCACCAAC TTTGTAAGCA CCGTTGCAAT 16396 |||||||||| |||||||||| |||||||||| ||||||||| ||| |||||| ||||| |||| AAAGCCACGA GAAATGAACT TGCAATTCTT TACCACCAAT TTTATAAGCA CCGTTACAAT 180 AAGCACAATG AATATTAGCT TGTTGTTTAA AGCCAAGAGG GTCAAAGGGG TCTTTATCAA 16456 |||||||||| |||||||||| |||||||||| | |||||||| |||||| ||| |||||||||| AAGCACAATG AATATTAGCT TGTTGTTTAA ACCCAAGAGG GTCAAAAGGG TCTTTATCAA 240 GTTCCCTCAT TCGACTCGTA GCCAATTGAT ACTTGGCTAC GTACTCCTCA TCCGCCGCAT 16516 |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| GTTCCCTCAT TCGACTTGTA GCCAATTGAT ACTTGGCTAC GTACTCCTCA TCCGCCGCAT 300 GAGCAGGGGG GCGGATGCGG AGTTTAGTCA TAGAAGGGAA CTTGTAGTAC GGAACACTAT 16576 |||||||||| |||||||||| ||||| |||| ||| |||||| |||||||||| ||||| |||| GAGCAGGGGG GCGGATGCGG AGTTTCGTCA TAGGAGGGAA CTTGTAGTAC GGAACGCTAT 360 CGATATCATC GGGTACAGGA GGGCAACAAC TGTATATTAC ATCAACACC- -T-TCTTTTA 16633 |||||||||| ||||||||| |||||||||| ||||| || ||| ||| | || | || CGATATCATC AGGTACAGGA GGGCAACAAC TGTATGAGAC TTCAGTACCT TTATCATCTA 420 CATGGGCAGT ACCACAAGAC TTGAGATCAG GAGGTGGTAT AGGTGCAGCA GTCGCTAATG 16693 ||||||| ||||||||| |||||||||| | |||||||| ||| |||||| | ||||||| TATGGGCAAC ACCACAAGAT TTGAGATCAG GTGGTGGTAT AGGAGCAGCA GAGGCTAATG 480 GTGCAAGATT AGCTGCACCA TAAAGACCTC CTAACCCTAA AAGAACGTTT CGTCTATCAA 16753 |||||||||| |||||||||| |||| ||||| |||||||||| |||||| ||| | ||||||| GTGCAAGATT AGCTGCACCA TAAAAACCTC CTAACCCTAA AAGAACATTT CTCCTATCAA 540 CAGCGTCAGG GTTTTTGTCA ACGTTGTTTG CGTTGCATGA AACCTTGAAA CTTTGATTAC 16813 |||||||| | |||||||||| | | |||||||||| |||||||||| |||||| | CAGCGTCAAG GTTTTTGTCA TGCTCGCCAA CGTTGCATGA AACCTTGAAA CTTTGACAGC 600 GCCTTCCGTG GAGGAAAAGT TGAGAGGGTT TTGATAACAA GGATGAGTTG GTGGTGGTGA 16873 ||||||| || ||||||| || |||||||||| ||||||| || | |||| | || |||||| GCCTTCCATG GAGGAAAGGT TGAGAGGGTT TTGATAAGAA AGTAGAGTGG TTGTTGGTGA 660 AGGAAGAAGA GAGGGATTTG TTGGTGCATA AAGGAAGAGT AGTAGTAATA GAAGAAGAA 16932 ||| |||||| |||||||||| |||||| ||| | | || |||| || | | ||||||| AGGGAGAAGA GAGGGATTTG TTGGTGGATA ATAAAGGAAG AGTATTAGGA GTAGAAGAA 719 hqPGS_C08HBa0336I24.1+_SGN-E317913- (16217 16932) ******************************************************************************** EST sequence 106 -strand 720 n (File: SGN-E326071-) 1 TATACGCATA CCTTTTGGAT GATCCCAATT CCCAGTAAGG TAAAGCAAAA GTTGGATCAT 61 TAATAAGTGA CCCCAATATC CTTTCGTAAA AGTACAAGTA CCATCTATGG AACGGAAAGA 121 AAAGCCACGA GAAATGAACT TGCAATTCTT TACCACCAAT TTTATAAGCA CCGTTACAAT 181 AAGCACAATG AATATTAGCT TGTTGTTTAA ACCCAAGAGG GTCAAAAGGG TCTTTATCAA 241 GTTCCCTCAT TCGACTTGTA GCCAATTGAT ACTTGGCTAC GTACTCCTCA TCCGCCGCAT 301 GAGCAGGGGG GCGGATGCGG AGTTTCGTCA TAGGAGGGAA CTTGTAGTAC GGAACGCTAT 361 CGATATCATC AGGTACAGGA GGGCAACAAC TGTATGAGAC TTCAGTACCT TTATCATCTA 421 TATGGGCAAC ACCACAAGAT TTGAGATCAG GTGGTGGTAT AGGAGCAGCA GAGGCTAATG 481 GTGCAAGATT AGCTGCACCA TAAAAACCTC CTAACCCTAA AAGAACATTT CTCCTATCAA 541 CAGCGTCAAG GTTTTTGTCA TGCTCGCCAA CGTTGCATGA AACCTTGAAA CTTTGACAGC 601 GCCTTCCATG GAGGAAAGGT TGAGAGGGTT TTGATAAGAA AGTAGAGTGG TTGTTGGTGA 661 AGGGAGAAGA GAGGGATTTG TTGGTGGATA ATAAAGGAAG AGTATTAGGA GTAGAAGAAG Predicted gene structure (within gDNA segment 15518 to 19279): Exon 1 16218 16933 ( 716 n); cDNA 1 720 ( 720 n); score: 0.890 MATCH C08HBa0336I24.1+ SGN-E326071- 0.890 716 0.994 C PGS_C08HBa0336I24.1+_SGN-E326071- (16218 16933) Alignment (genomic DNA sequence = upper lines): TATACGCATG CCTTTTGGAT GATCCCAATT -CCAGTAAGG TAAAGCAAAA GTTGGATCAT 16276 ||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| TATACGCATA CCTTTTGGAT GATCCCAATT CCCAGTAAGG TAAAGCAAAA GTTGGATCAT 60 TAATAAGTGA TCCCAAAATT CTTTCGTAAA AGTACAAGTA CCATCTATGA AAGGGAAAGA 16336 |||||||||| ||||| || |||||||||| |||||||||| ||||||||| || ||||||| TAATAAGTGA CCCCAATATC CTTTCGTAAA AGTACAAGTA CCATCTATGG AACGGAAAGA 120 AAAGCCACGA GAAATGAACT TGCAATTCTT TACCACCAAC TTTGTAAGCA CCGTTGCAAT 16396 |||||||||| |||||||||| |||||||||| ||||||||| ||| |||||| ||||| |||| AAAGCCACGA GAAATGAACT TGCAATTCTT TACCACCAAT TTTATAAGCA CCGTTACAAT 180 AAGCACAATG AATATTAGCT TGTTGTTTAA AGCCAAGAGG GTCAAAGGGG TCTTTATCAA 16456 |||||||||| |||||||||| |||||||||| | |||||||| |||||| ||| |||||||||| AAGCACAATG AATATTAGCT TGTTGTTTAA ACCCAAGAGG GTCAAAAGGG TCTTTATCAA 240 GTTCCCTCAT TCGACTCGTA GCCAATTGAT ACTTGGCTAC GTACTCCTCA TCCGCCGCAT 16516 |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| GTTCCCTCAT TCGACTTGTA GCCAATTGAT ACTTGGCTAC GTACTCCTCA TCCGCCGCAT 300 GAGCAGGGGG GCGGATGCGG AGTTTAGTCA TAGAAGGGAA CTTGTAGTAC GGAACACTAT 16576 |||||||||| |||||||||| ||||| |||| ||| |||||| |||||||||| ||||| |||| GAGCAGGGGG GCGGATGCGG AGTTTCGTCA TAGGAGGGAA CTTGTAGTAC GGAACGCTAT 360 CGATATCATC GGGTACAGGA GGGCAACAAC TGTATATTAC ATCAACACC- -T-TCTTTTA 16633 |||||||||| ||||||||| |||||||||| ||||| || ||| ||| | || | || CGATATCATC AGGTACAGGA GGGCAACAAC TGTATGAGAC TTCAGTACCT TTATCATCTA 420 CATGGGCAGT ACCACAAGAC TTGAGATCAG GAGGTGGTAT AGGTGCAGCA GTCGCTAATG 16693 ||||||| ||||||||| |||||||||| | |||||||| ||| |||||| | ||||||| TATGGGCAAC ACCACAAGAT TTGAGATCAG GTGGTGGTAT AGGAGCAGCA GAGGCTAATG 480 GTGCAAGATT AGCTGCACCA TAAAGACCTC CTAACCCTAA AAGAACGTTT CGTCTATCAA 16753 |||||||||| |||||||||| |||| ||||| |||||||||| |||||| ||| | ||||||| GTGCAAGATT AGCTGCACCA TAAAAACCTC CTAACCCTAA AAGAACATTT CTCCTATCAA 540 CAGCGTCAGG GTTTTTGTCA ACGTTGTTTG CGTTGCATGA AACCTTGAAA CTTTGATTAC 16813 |||||||| | |||||||||| | | |||||||||| |||||||||| |||||| | CAGCGTCAAG GTTTTTGTCA TGCTCGCCAA CGTTGCATGA AACCTTGAAA CTTTGACAGC 600 GCCTTCCGTG GAGGAAAAGT TGAGAGGGTT TTGATAACAA GGATGAGTTG GTGGTGGTGA 16873 ||||||| || ||||||| || |||||||||| ||||||| || | |||| | || |||||| GCCTTCCATG GAGGAAAGGT TGAGAGGGTT TTGATAAGAA AGTAGAGTGG TTGTTGGTGA 660 AGGAAGAAGA GAGGGATTTG TTGGTGCATA AAGGAAGAGT AGTAGTAATA GAAGAAGAAG 16933 ||| |||||| |||||||||| |||||| ||| | | || |||| || | | |||||||| AGGGAGAAGA GAGGGATTTG TTGGTGGATA ATAAAGGAAG AGTATTAGGA GTAGAAGAAG 720 hqPGS_C08HBa0336I24.1+_SGN-E326071- (16218 16933) ******************************************************************************** EST sequence 294 -strand 697 n (File: SGN-E320020-) 1 CCCAATCCCA GTAAGGTAAA GCAAAAGTTG GATCATTAAT AAGTGACCCC AATATCCTTT 61 CGTAAAAGTA CAAGTACCAT CTATGGAACG GAAAGAAAAG CCACGAGAAA TGAACTTGCA 121 ATTCTTNACC ACCAATTTTA TAAGCACCGT TACAATAAGC ACAATGAATA TTAGCTTGTT 181 GTTTAAACCC AAGAGGGTCA AAAGGGTCTT TATCAAGTTC CCTCATTCGA CTTGTAGCCA 241 ATTGATACTT GGCTACGTAC TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT 301 TCGTCATAGG AGGGAACTTG TAGTACGGAA CGCTATCGAT ATCATCAGGT ACAGGAGGGC 361 AACAACTGTA TGAGACTTCA GTACCTTTAT CATCTATATG GGCAACACCA CAAGATTTGA 421 GATCAGGTGG TGGTATAGGA GCAGCAGAGG CTAATGGTGC AAGATTAGCT GCACCATAAA 481 AACCTCCTAA CCCTAAAAGA ACATTTCTCC TATCAACAGC GTCAAGGTTT TTGTCATGCT 541 CGCCAACGTT GCATGAAACC TTGAAACTTT GACAGCGCCT TCCATGGAGG AAAGGTTGAG 601 AGGGTTTTGA TAAGAAAGTA GAGTGGTTGT TGGTGAAGGG AGAAGAGAGG GATTTGTTGG 661 TGGATAATAA AGGAAGAGTA TTAGGAGTAG AAGAAGA Predicted gene structure (within gDNA segment 15568 to 19289): Exon 1 16241 16934 ( 694 n); cDNA 1 697 ( 697 n); score: 0.888 MATCH C08HBa0336I24.1+ SGN-E320020- 0.888 694 0.996 C PGS_C08HBa0336I24.1+_SGN-E320020- (16241 16934) Alignment (genomic DNA sequence = upper lines): CCCAATTCCA GTAAGGTAAA GCAAAAGTTG GATCATTAAT AAGTGATCCC AAAATTCTTT 16300 |||||| ||| |||||||||| |||||||||| |||||||||| |||||| ||| || || |||| CCCAATCCCA GTAAGGTAAA GCAAAAGTTG GATCATTAAT AAGTGACCCC AATATCCTTT 60 CGTAAAAGTA CAAGTACCAT CTATGAAAGG GAAAGAAAAG CCACGAGAAA TGAACTTGCA 16360 |||||||||| |||||||||| ||||| || | |||||||||| |||||||||| |||||||||| CGTAAAAGTA CAAGTACCAT CTATGGAACG GAAAGAAAAG CCACGAGAAA TGAACTTGCA 120 ATTCTTTACC ACCAACTTTG TAAGCACCGT TGCAATAAGC ACAATGAATA TTAGCTTGTT 16420 |||||| ||| ||||| ||| |||||||||| | |||||||| |||||||||| |||||||||| ATTCTTNACC ACCAATTTTA TAAGCACCGT TACAATAAGC ACAATGAATA TTAGCTTGTT 180 GTTTAAAGCC AAGAGGGTCA AAGGGGTCTT TATCAAGTTC CCTCATTCGA CTCGTAGCCA 16480 ||||||| || |||||||||| || ||||||| |||||||||| |||||||||| || ||||||| GTTTAAACCC AAGAGGGTCA AAAGGGTCTT TATCAAGTTC CCTCATTCGA CTTGTAGCCA 240 ATTGATACTT GGCTACGTAC TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT 16540 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGATACTT GGCTACGTAC TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT 300 TAGTCATAGA AGGGAACTTG TAGTACGGAA CACTATCGAT ATCATCGGGT ACAGGAGGGC 16600 | ||||||| |||||||||| |||||||||| | |||||||| |||||| ||| |||||||||| TCGTCATAGG AGGGAACTTG TAGTACGGAA CGCTATCGAT ATCATCAGGT ACAGGAGGGC 360 AACAACTGTA TATTACATCA ACACC--T-T CTTTTACATG GGCAGTACCA CAAGACTTGA 16657 |||||||||| | || ||| ||| | | | | || ||| |||| |||| ||||| |||| AACAACTGTA TGAGACTTCA GTACCTTTAT CATCTATATG GGCAACACCA CAAGATTTGA 420 GATCAGGAGG TGGTATAGGT GCAGCAGTCG CTAATGGTGC AAGATTAGCT GCACCATAAA 16717 ||||||| || ||||||||| ||||||| | |||||||||| |||||||||| |||||||||| GATCAGGTGG TGGTATAGGA GCAGCAGAGG CTAATGGTGC AAGATTAGCT GCACCATAAA 480 GACCTCCTAA CCCTAAAAGA ACGTTTCGTC TATCAACAGC GTCAGGGTTT TTGTCAACGT 16777 ||||||||| |||||||||| || |||| | |||||||||| |||| ||||| |||||| | AACCTCCTAA CCCTAAAAGA ACATTTCTCC TATCAACAGC GTCAAGGTTT TTGTCATGCT 540 TGTTTGCGTT GCATGAAACC TTGAAACTTT GATTACGCCT TCCGTGGAGG AAAAGTTGAG 16837 | |||| |||||||||| |||||||||| || ||||| ||| |||||| ||| |||||| CGCCAACGTT GCATGAAACC TTGAAACTTT GACAGCGCCT TCCATGGAGG AAAGGTTGAG 600 AGGGTTTTGA TAACAAGGAT GAGTTGGTGG TGGTGAAGGA AGAAGAGAGG GATTTGTTGG 16897 |||||||||| ||| || | |||| | || ||||||||| |||||||||| |||||||||| AGGGTTTTGA TAAGAAAGTA GAGTGGTTGT TGGTGAAGGG AGAAGAGAGG GATTTGTTGG 660 TGCATAAAGG AAGAGTAGTA GTAATAGAAG AAGAAGA 16934 || |||| | || |||| || || || ||||||| TGGATAATAA AGGAAGAGTA TTAGGAGTAG AAGAAGA 697 hqPGS_C08HBa0336I24.1+_SGN-E320020- (16241 16934) ******************************************************************************** EST sequence 125 -strand 658 n (File: SGN-E315584-) 1 CCCAATTCCA GTAAGGTAAA GCAAAAGTTG GATCATTAAT AAGTGACCCC AATATCCTTT 61 CGTAAAAGTA CAAGTACCAT CTATGGAACG GAAAGAAAAG CCACGAGAAA TGAACTTGCA 121 ATTCTTTACC ACCAATTTTA TAAGCACCGT TACAATAAGC ACAATGAATA TTAGCTTGTT 181 GTTTAAACCC AAGAGGGTCA AAAGGGTCTT TATCAAGTTC CCTCATTCGA CTTGTAGCCA 241 ATTGATACTT GGCTACGTAC TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT 301 TCGTCATAGG AGGGAACTTG TAGTACGGAA CGCTATCGAT ATCATCAGGT ACAGGAGGGC 361 AACAACTGTA TGAGACTTCA GTACCTTTAT CATCTATATG GGCAACACCA CAAGATTTGA 421 GATCAGGTGG TGGTATAGGA GCAGCAGAGG CTAATGGTGC AAGATTAGCT GCACCATAAA 481 AACCTCCTAA CCCTAAAAGA ACATTTCTCC TATCAACAGC GTCAAGGTTT TTGTCATGCT 541 CGCCAACGTT GCATGAAACC TTGAAACTTT GACAGCGCCT TCCATGGAGG AAAGGTTGAG 601 AGGGTTTTGA TAAGAAAGTA GAGTGGTTGT TGGTGAAGGG AGAAGAGAGG GATTTGTT Predicted gene structure (within gDNA segment 15631 to 18899): Exon 1 16241 16895 ( 655 n); cDNA 1 658 ( 658 n); score: 0.902 MATCH C08HBa0336I24.1+ SGN-E315584- 0.902 655 0.995 C PGS_C08HBa0336I24.1+_SGN-E315584- (16241 16895) Alignment (genomic DNA sequence = upper lines): CCCAATTCCA GTAAGGTAAA GCAAAAGTTG GATCATTAAT AAGTGATCCC AAAATTCTTT 16300 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| || || |||| CCCAATTCCA GTAAGGTAAA GCAAAAGTTG GATCATTAAT AAGTGACCCC AATATCCTTT 60 CGTAAAAGTA CAAGTACCAT CTATGAAAGG GAAAGAAAAG CCACGAGAAA TGAACTTGCA 16360 |||||||||| |||||||||| ||||| || | |||||||||| |||||||||| |||||||||| CGTAAAAGTA CAAGTACCAT CTATGGAACG GAAAGAAAAG CCACGAGAAA TGAACTTGCA 120 ATTCTTTACC ACCAACTTTG TAAGCACCGT TGCAATAAGC ACAATGAATA TTAGCTTGTT 16420 |||||||||| ||||| ||| |||||||||| | |||||||| |||||||||| |||||||||| ATTCTTTACC ACCAATTTTA TAAGCACCGT TACAATAAGC ACAATGAATA TTAGCTTGTT 180 GTTTAAAGCC AAGAGGGTCA AAGGGGTCTT TATCAAGTTC CCTCATTCGA CTCGTAGCCA 16480 ||||||| || |||||||||| || ||||||| |||||||||| |||||||||| || ||||||| GTTTAAACCC AAGAGGGTCA AAAGGGTCTT TATCAAGTTC CCTCATTCGA CTTGTAGCCA 240 ATTGATACTT GGCTACGTAC TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT 16540 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGATACTT GGCTACGTAC TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT 300 TAGTCATAGA AGGGAACTTG TAGTACGGAA CACTATCGAT ATCATCGGGT ACAGGAGGGC 16600 | ||||||| |||||||||| |||||||||| | |||||||| |||||| ||| |||||||||| TCGTCATAGG AGGGAACTTG TAGTACGGAA CGCTATCGAT ATCATCAGGT ACAGGAGGGC 360 AACAACTGTA TATTACATCA ACACC--T-T CTTTTACATG GGCAGTACCA CAAGACTTGA 16657 |||||||||| | || ||| ||| | | | | || ||| |||| |||| ||||| |||| AACAACTGTA TGAGACTTCA GTACCTTTAT CATCTATATG GGCAACACCA CAAGATTTGA 420 GATCAGGAGG TGGTATAGGT GCAGCAGTCG CTAATGGTGC AAGATTAGCT GCACCATAAA 16717 ||||||| || ||||||||| ||||||| | |||||||||| |||||||||| |||||||||| GATCAGGTGG TGGTATAGGA GCAGCAGAGG CTAATGGTGC AAGATTAGCT GCACCATAAA 480 GACCTCCTAA CCCTAAAAGA ACGTTTCGTC TATCAACAGC GTCAGGGTTT TTGTCAACGT 16777 ||||||||| |||||||||| || |||| | |||||||||| |||| ||||| |||||| | AACCTCCTAA CCCTAAAAGA ACATTTCTCC TATCAACAGC GTCAAGGTTT TTGTCATGCT 540 TGTTTGCGTT GCATGAAACC TTGAAACTTT GATTACGCCT TCCGTGGAGG AAAAGTTGAG 16837 | |||| |||||||||| |||||||||| || ||||| ||| |||||| ||| |||||| CGCCAACGTT GCATGAAACC TTGAAACTTT GACAGCGCCT TCCATGGAGG AAAGGTTGAG 600 AGGGTTTTGA TAACAAGGAT GAGTTGGTGG TGGTGAAGGA AGAAGAGAGG GATTTGTT 16895 |||||||||| ||| || | |||| | || ||||||||| |||||||||| |||||||| AGGGTTTTGA TAAGAAAGTA GAGTGGTTGT TGGTGAAGGG AGAAGAGAGG GATTTGTT 658 hqPGS_C08HBa0336I24.1+_SGN-E315584- (16241 16895) ******************************************************************************** EST sequence 177 -strand 570 n (File: SGN-E316925-) 1 CCCAATTCCA GTAAGGTAAA GCAAAAGTTG GATCATTAAT AAGTGACCCC AATATCCTTT 61 CGTAAAAGTA CAAGTACCAT CTATGGACCG GAAAGAAAAG CCACGAGAAA TGAACTTGCA 121 ATTCTTTACC ACCAATTTTA TAAGCACCGT TACAATAAGC ACAATGAATA TTAGCTTGTT 181 GTTTAAACCC AAGAGGGTCA AAAGGGTCTT TATCAAGTTC CCTCATTCGA CTTGTAGCCA 241 ATTGATACTT GGCTACGTAC TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT 301 TCGTCATAGG AGGGAACTTG TAGTACGGAA CGCTATCGAT ATCATCAGGT ACAGGAGGGC 361 AACAACTGTA TGAGACTTCA GTACCTTTAT CATCTATATG GGCAACACCA CAAGATTTGA 421 GATCAGGTGG TGGTATAGGA GCAGCAGAGG CTAATGGTGC AAGATTAGCT GCACCATAAA 481 AACCTCCTAA CCCTAAAAGA ACATTTCTCC TATCAACAGC GTCAAGGTTT TTGTCATGCT 541 CGCCAACGTT GCATGAAACC TTGAAACTTT Predicted gene structure (within gDNA segment 15631 to 18019): Exon 1 16241 16807 ( 567 n); cDNA 1 570 ( 570 n); score: 0.907 MATCH C08HBa0336I24.1+ SGN-E316925- 0.907 567 0.995 C PGS_C08HBa0336I24.1+_SGN-E316925- (16241 16807) Alignment (genomic DNA sequence = upper lines): CCCAATTCCA GTAAGGTAAA GCAAAAGTTG GATCATTAAT AAGTGATCCC AAAATTCTTT 16300 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| || || |||| CCCAATTCCA GTAAGGTAAA GCAAAAGTTG GATCATTAAT AAGTGACCCC AATATCCTTT 60 CGTAAAAGTA CAAGTACCAT CTATGAAAGG GAAAGAAAAG CCACGAGAAA TGAACTTGCA 16360 |||||||||| |||||||||| ||||| | | |||||||||| |||||||||| |||||||||| CGTAAAAGTA CAAGTACCAT CTATGGACCG GAAAGAAAAG CCACGAGAAA TGAACTTGCA 120 ATTCTTTACC ACCAACTTTG TAAGCACCGT TGCAATAAGC ACAATGAATA TTAGCTTGTT 16420 |||||||||| ||||| ||| |||||||||| | |||||||| |||||||||| |||||||||| ATTCTTTACC ACCAATTTTA TAAGCACCGT TACAATAAGC ACAATGAATA TTAGCTTGTT 180 GTTTAAAGCC AAGAGGGTCA AAGGGGTCTT TATCAAGTTC CCTCATTCGA CTCGTAGCCA 16480 ||||||| || |||||||||| || ||||||| |||||||||| |||||||||| || ||||||| GTTTAAACCC AAGAGGGTCA AAAGGGTCTT TATCAAGTTC CCTCATTCGA CTTGTAGCCA 240 ATTGATACTT GGCTACGTAC TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT 16540 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGATACTT GGCTACGTAC TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT 300 TAGTCATAGA AGGGAACTTG TAGTACGGAA CACTATCGAT ATCATCGGGT ACAGGAGGGC 16600 | ||||||| |||||||||| |||||||||| | |||||||| |||||| ||| |||||||||| TCGTCATAGG AGGGAACTTG TAGTACGGAA CGCTATCGAT ATCATCAGGT ACAGGAGGGC 360 AACAACTGTA TATTACATCA ACACC--T-T CTTTTACATG GGCAGTACCA CAAGACTTGA 16657 |||||||||| | || ||| ||| | | | | || ||| |||| |||| ||||| |||| AACAACTGTA TGAGACTTCA GTACCTTTAT CATCTATATG GGCAACACCA CAAGATTTGA 420 GATCAGGAGG TGGTATAGGT GCAGCAGTCG CTAATGGTGC AAGATTAGCT GCACCATAAA 16717 ||||||| || ||||||||| ||||||| | |||||||||| |||||||||| |||||||||| GATCAGGTGG TGGTATAGGA GCAGCAGAGG CTAATGGTGC AAGATTAGCT GCACCATAAA 480 GACCTCCTAA CCCTAAAAGA ACGTTTCGTC TATCAACAGC GTCAGGGTTT TTGTCAACGT 16777 ||||||||| |||||||||| || |||| | |||||||||| |||| ||||| |||||| | AACCTCCTAA CCCTAAAAGA ACATTTCTCC TATCAACAGC GTCAAGGTTT TTGTCATGCT 540 TGTTTGCGTT GCATGAAACC TTGAAACTTT 16807 | |||| |||||||||| |||||||||| CGCCAACGTT GCATGAAACC TTGAAACTTT 570 hqPGS_C08HBa0336I24.1+_SGN-E316925- (16241 16807) ******************************************************************************** EST sequence 195 -strand 628 n (File: SGN-E318205-) 1 TCCAGTAAGG TAAAGCAAAA GTTGGATCAT TAATAAGTGA CCCCAATATC CTTTCGTAAA 61 AGTACAAGTA CCATCTATGG AACGGAAAGA AAAGCCACGA GAAATGAACT TGCAATTCTT 121 TACCACCAAT TTTATAAGCA CCGTTACAAT AAGCACAATG AATATTAGCT TGTTGTTTAA 181 ACCCAAGAGG GTCAAAAGGG TCTTTATCAA GTTCCCTCAT TCGACTTGTA GCCAATTGAT 241 ACTTGGCTAC GTACTCCTCA TCCGCCGCAT GAGCAGGGGG GCGGATGCGG AGTTTCGTCA 301 TAGGAGGGAA CTTGTAGTAC GGAACGCTAT CGATATCATC AGGTACAGGA GGGCAACAAC 361 TGTATGAGAC TTCAGTACCT TTATCATCTA TATGGGCAAC ACCACAAGAT TTGAGATCAG 421 GTGGTGGTAT AGGAGCAGCA GAGGCTAATG GTGCAAGATT AGCTGCACCA TAAAAACCTC 481 CTAACCCTAA AAGAACATTT CTCCTATCAA CAGCGTCAAG GTTTTTGTCA TGCTCGCCAA 541 CGTTGCATGA AACCTTGAAA CTTTGACAGC GCCTTCCATG GAGGAAAGGT TGAGAGGGTT 601 TTGATAAGAA AGTAGAGTGG TTGTTGGT Predicted gene structure (within gDNA segment 15637 to 18659): Exon 1 16247 16871 ( 625 n); cDNA 1 628 ( 628 n); score: 0.898 MATCH C08HBa0336I24.1+ SGN-E318205- 0.898 625 0.995 C PGS_C08HBa0336I24.1+_SGN-E318205- (16247 16871) Alignment (genomic DNA sequence = upper lines): TCCAGTAAGG TAAAGCAAAA GTTGGATCAT TAATAAGTGA TCCCAAAATT CTTTCGTAAA 16306 |||||||||| |||||||||| |||||||||| |||||||||| ||||| || |||||||||| TCCAGTAAGG TAAAGCAAAA GTTGGATCAT TAATAAGTGA CCCCAATATC CTTTCGTAAA 60 AGTACAAGTA CCATCTATGA AAGGGAAAGA AAAGCCACGA GAAATGAACT TGCAATTCTT 16366 |||||||||| ||||||||| || ||||||| |||||||||| |||||||||| |||||||||| AGTACAAGTA CCATCTATGG AACGGAAAGA AAAGCCACGA GAAATGAACT TGCAATTCTT 120 TACCACCAAC TTTGTAAGCA CCGTTGCAAT AAGCACAATG AATATTAGCT TGTTGTTTAA 16426 ||||||||| ||| |||||| ||||| |||| |||||||||| |||||||||| |||||||||| TACCACCAAT TTTATAAGCA CCGTTACAAT AAGCACAATG AATATTAGCT TGTTGTTTAA 180 AGCCAAGAGG GTCAAAGGGG TCTTTATCAA GTTCCCTCAT TCGACTCGTA GCCAATTGAT 16486 | |||||||| |||||| ||| |||||||||| |||||||||| |||||| ||| |||||||||| ACCCAAGAGG GTCAAAAGGG TCTTTATCAA GTTCCCTCAT TCGACTTGTA GCCAATTGAT 240 ACTTGGCTAC GTACTCCTCA TCCGCCGCAT GAGCAGGGGG GCGGATGCGG AGTTTAGTCA 16546 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| ACTTGGCTAC GTACTCCTCA TCCGCCGCAT GAGCAGGGGG GCGGATGCGG AGTTTCGTCA 300 TAGAAGGGAA CTTGTAGTAC GGAACACTAT CGATATCATC GGGTACAGGA GGGCAACAAC 16606 ||| |||||| |||||||||| ||||| |||| |||||||||| ||||||||| |||||||||| TAGGAGGGAA CTTGTAGTAC GGAACGCTAT CGATATCATC AGGTACAGGA GGGCAACAAC 360 TGTATATTAC ATCAACACC- -T-TCTTTTA CATGGGCAGT ACCACAAGAC TTGAGATCAG 16663 ||||| || ||| ||| | || | || ||||||| ||||||||| |||||||||| TGTATGAGAC TTCAGTACCT TTATCATCTA TATGGGCAAC ACCACAAGAT TTGAGATCAG 420 GAGGTGGTAT AGGTGCAGCA GTCGCTAATG GTGCAAGATT AGCTGCACCA TAAAGACCTC 16723 | |||||||| ||| |||||| | ||||||| |||||||||| |||||||||| |||| ||||| GTGGTGGTAT AGGAGCAGCA GAGGCTAATG GTGCAAGATT AGCTGCACCA TAAAAACCTC 480 CTAACCCTAA AAGAACGTTT CGTCTATCAA CAGCGTCAGG GTTTTTGTCA ACGTTGTTTG 16783 |||||||||| |||||| ||| | ||||||| |||||||| | |||||||||| | | CTAACCCTAA AAGAACATTT CTCCTATCAA CAGCGTCAAG GTTTTTGTCA TGCTCGCCAA 540 CGTTGCATGA AACCTTGAAA CTTTGATTAC GCCTTCCGTG GAGGAAAAGT TGAGAGGGTT 16843 |||||||||| |||||||||| |||||| | ||||||| || ||||||| || |||||||||| CGTTGCATGA AACCTTGAAA CTTTGACAGC GCCTTCCATG GAGGAAAGGT TGAGAGGGTT 600 TTGATAACAA GGATGAGTTG GTGGTGGT 16871 ||||||| || | |||| | || |||| TTGATAAGAA AGTAGAGTGG TTGTTGGT 628 hqPGS_C08HBa0336I24.1+_SGN-E318205- (16247 16871) ******************************************************************************** EST sequence 80 -strand 689 n (File: SGN-E346609-) 1 CCAGTAGGGT AAAGCAAAAG TTGGATCATT AATAAGTGAT CCCAAAATTC TTTCGTAAAA 61 GTACAAGTAC CATCTATGAA GGGAAAGAAA AGCCACGAGA AATGAACTTG CAATTCTTTA 121 CCACCAACTT TGTAAGCACC GTTGCAATAA GCACAATGAA TATTAGCTTG TTGTTTAAAG 181 CCAAGAGGGT CAAAGGGGTC TTTATCAAGT TCCCTCATTC GACTCGTAGC CAATTGATAC 241 TTGGCTACGT ACTCCTCATC CGCCGCATGA GCAGGGGGGC GGATGCGGAG TTTAGTCATA 301 GAAGGGAACT TGTAGTACGG AACACTATCG ATATCATCGG GTACAGGAGG GCAACAACTG 361 TATATTACAT CAACACCTTC TTTTACATGG GCAGTACCAC AAGACTTGAG ATCAGGAGGT 421 GGTATAGGTG CAGCAGTCGC TAATGGTGCA AGATTAGCTG CACCATAAAG ACCTCCTAAC 481 CCTAAAAGAA CGTTTCGTCT ATCAACAGCG TCAGGGTTTT TGTCAACGTT GTTTGCGTTG 541 CATGAAACCT TGAAACTTTG ATTACGCCTT CCGTGGAGGA AAAGTTGAGA GGGTTTTGAT 601 AACAAGGATG AGTTGGTGGT GGTGAAGGAA GAAGAGAGGG ATTTGTTGGT GCATAAAGGA 661 AGAGTAGTAG TAATAGAAGA AGAAGAAGA Predicted gene structure (within gDNA segment 15575 to 17537): Exon 1 16248 16937 ( 690 n); cDNA 1 689 ( 689 n); score: 0.997 MATCH C08HBa0336I24.1+ SGN-E346609- 0.997 690 1.001 C PGS_C08HBa0336I24.1+_SGN-E346609- (16248 16937) Alignment (genomic DNA sequence = upper lines): CCAGTAAGGT AAAGCAAAAG TTGGATCATT AATAAGTGAT CCCAAAATTC TTTCGTAAAA 16307 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAGTAGGGT AAAGCAAAAG TTGGATCATT AATAAGTGAT CCCAAAATTC TTTCGTAAAA 60 GTACAAGTAC CATCTATGAA AGGGAAAGAA AAGCCACGAG AAATGAACTT GCAATTCTTT 16367 |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| GTACAAGTAC CATCTATG-A AGGGAAAGAA AAGCCACGAG AAATGAACTT GCAATTCTTT 119 ACCACCAACT TTGTAAGCAC CGTTGCAATA AGCACAATGA ATATTAGCTT GTTGTTTAAA 16427 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCACCAACT TTGTAAGCAC CGTTGCAATA AGCACAATGA ATATTAGCTT GTTGTTTAAA 179 GCCAAGAGGG TCAAAGGGGT CTTTATCAAG TTCCCTCATT CGACTCGTAG CCAATTGATA 16487 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCAAGAGGG TCAAAGGGGT CTTTATCAAG TTCCCTCATT CGACTCGTAG CCAATTGATA 239 CTTGGCTACG TACTCCTCAT CCGCCGCATG AGCAGGGGGG CGGATGCGGA GTTTAGTCAT 16547 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGGCTACG TACTCCTCAT CCGCCGCATG AGCAGGGGGG CGGATGCGGA GTTTAGTCAT 299 AGAAGGGAAC TTGTAGTACG GAACACTATC GATATCATCG GGTACAGGAG GGCAACAACT 16607 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAGGGAAC TTGTAGTACG GAACACTATC GATATCATCG GGTACAGGAG GGCAACAACT 359 GTATATTACA TCAACACCTT CTTTTACATG GGCAGTACCA CAAGACTTGA GATCAGGAGG 16667 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTATATTACA TCAACACCTT CTTTTACATG GGCAGTACCA CAAGACTTGA GATCAGGAGG 419 TGGTATAGGT GCAGCAGTCG CTAATGGTGC AAGATTAGCT GCACCATAAA GACCTCCTAA 16727 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTATAGGT GCAGCAGTCG CTAATGGTGC AAGATTAGCT GCACCATAAA GACCTCCTAA 479 CCCTAAAAGA ACGTTTCGTC TATCAACAGC GTCAGGGTTT TTGTCAACGT TGTTTGCGTT 16787 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCTAAAAGA ACGTTTCGTC TATCAACAGC GTCAGGGTTT TTGTCAACGT TGTTTGCGTT 539 GCATGAAACC TTGAAACTTT GATTACGCCT TCCGTGGAGG AAAAGTTGAG AGGGTTTTGA 16847 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCATGAAACC TTGAAACTTT GATTACGCCT TCCGTGGAGG AAAAGTTGAG AGGGTTTTGA 599 TAACAAGGAT GAGTTGGTGG TGGTGAAGGA AGAAGAGAGG GATTTGTTGG TGCATAAAGG 16907 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAACAAGGAT GAGTTGGTGG TGGTGAAGGA AGAAGAGAGG GATTTGTTGG TGCATAAAGG 659 AAGAGTAGTA GTAATAGAAG AAGAAGAAGA 16937 |||||||||| |||||||||| |||||||||| AAGAGTAGTA GTAATAGAAG AAGAAGAAGA 689 hqPGS_C08HBa0336I24.1+_SGN-E346609- (16248 16937) ******************************************************************************** EST sequence 108 -strand 689 n (File: SGN-E326119-) 1 CCAGTAAGTA AAGCAAAAGT TGGATCATTA ATAAGTGACC CCAATATCCT TTCGTAAAAG 61 TACAAGTACC ATCTATGGAA AGGAAAGAAA AGCCACGAGA AATGAACTTG CAATTCTTTA 121 CCACCAATTT TATAAGCACC GTTACAATAA GCACAATGAA TATTAGCTTG TTGTTTAAAC 181 CCAAGAGGGT CAAAAGGGTC TTTATCAAGT TCCCTCATTC GACTTGTAGC CAATTGATAC 241 TTGGCTACGT ACTCCTCATC CGCCGCATGA GCAGGGGGGC GGATGCGGAG TTTCGTCATA 301 GGAGGGAACT TGTAGTACGG AACGCTATCG ATATCATCAG GTACAGGAGG GCAACAACTG 361 TATGAGACTT CAGTACCTTT ATCATCTATA TGGGCAACAC CACAAGATTT GAGATCAGGT 421 GGTGGTATAG GAGCAGCAGA GGCTAATGGT GCAAGATTAG CTGCACCATA AAAACCTCCT 481 AACCCTAAAA GAACATTTCT CCTATCAACA GCGTCAAGGT TTTTGTCATG CTCGCCAACG 541 TTGCATGAAA CCTTGAAACT TTGACAGCGC CTTCCATGGA GGAAAGGTTG AGAGGGTTTT 601 GATAAGAAAG TAGAGTGGTT GTTGGTGAAG GGAGAAGAGA GGGATTTGTT GGTGGATAAT 661 AAAGGAAGAG TATTAGGAGT AGAAGAAGA Predicted gene structure (within gDNA segment 15576 to 19289): Exon 1 16248 16934 ( 687 n); cDNA 1 689 ( 689 n); score: 0.889 MATCH C08HBa0336I24.1+ SGN-E326119- 0.889 687 0.997 C PGS_C08HBa0336I24.1+_SGN-E326119- (16248 16934) Alignment (genomic DNA sequence = upper lines): CCAGTAAGGT AAAGCAAAAG TTGGATCATT AATAAGTGAT CCCAAAATTC TTTCGTAAAA 16307 ||||||| || |||||||||| |||||||||| ||||||||| ||||| || | |||||||||| CCAGTAA-GT AAAGCAAAAG TTGGATCATT AATAAGTGAC CCCAATATCC TTTCGTAAAA 59 GTACAAGTAC CATCTATGAA AGGGAAAGAA AAGCCACGAG AAATGAACTT GCAATTCTTT 16367 |||||||||| |||||||| | | |||||||| |||||||||| |||||||||| |||||||||| GTACAAGTAC CATCTATGGA AAGGAAAGAA AAGCCACGAG AAATGAACTT GCAATTCTTT 119 ACCACCAACT TTGTAAGCAC CGTTGCAATA AGCACAATGA ATATTAGCTT GTTGTTTAAA 16427 |||||||| | || ||||||| |||| ||||| |||||||||| |||||||||| |||||||||| ACCACCAATT TTATAAGCAC CGTTACAATA AGCACAATGA ATATTAGCTT GTTGTTTAAA 179 GCCAAGAGGG TCAAAGGGGT CTTTATCAAG TTCCCTCATT CGACTCGTAG CCAATTGATA 16487 ||||||||| ||||| |||| |||||||||| |||||||||| ||||| |||| |||||||||| CCCAAGAGGG TCAAAAGGGT CTTTATCAAG TTCCCTCATT CGACTTGTAG CCAATTGATA 239 CTTGGCTACG TACTCCTCAT CCGCCGCATG AGCAGGGGGG CGGATGCGGA GTTTAGTCAT 16547 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| CTTGGCTACG TACTCCTCAT CCGCCGCATG AGCAGGGGGG CGGATGCGGA GTTTCGTCAT 299 AGAAGGGAAC TTGTAGTACG GAACACTATC GATATCATCG GGTACAGGAG GGCAACAACT 16607 || ||||||| |||||||||| |||| ||||| ||||||||| |||||||||| |||||||||| AGGAGGGAAC TTGTAGTACG GAACGCTATC GATATCATCA GGTACAGGAG GGCAACAACT 359 GTATATTACA TCAACACC-- T-TCTTTTAC ATGGGCAGTA CCACAAGACT TGAGATCAGG 16664 |||| || ||| ||| | || | || ||||||| | |||||||| | |||||||||| GTATGAGACT TCAGTACCTT TATCATCTAT ATGGGCAACA CCACAAGATT TGAGATCAGG 419 AGGTGGTATA GGTGCAGCAG TCGCTAATGG TGCAAGATTA GCTGCACCAT AAAGACCTCC 16724 ||||||||| || ||||||| |||||||| |||||||||| |||||||||| ||| |||||| TGGTGGTATA GGAGCAGCAG AGGCTAATGG TGCAAGATTA GCTGCACCAT AAAAACCTCC 479 TAACCCTAAA AGAACGTTTC GTCTATCAAC AGCGTCAGGG TTTTTGTCAA CGTTGTTTGC 16784 |||||||||| ||||| |||| |||||||| ||||||| || ||||||||| | | | TAACCCTAAA AGAACATTTC TCCTATCAAC AGCGTCAAGG TTTTTGTCAT GCTCGCCAAC 539 GTTGCATGAA ACCTTGAAAC TTTGATTACG CCTTCCGTGG AGGAAAAGTT GAGAGGGTTT 16844 |||||||||| |||||||||| ||||| || |||||| ||| |||||| ||| |||||||||| GTTGCATGAA ACCTTGAAAC TTTGACAGCG CCTTCCATGG AGGAAAGGTT GAGAGGGTTT 599 TGATAACAAG GATGAGTTGG TGGTGGTGAA GGAAGAAGAG AGGGATTTGT TGGTGCATAA 16904 |||||| || | |||| | || ||||||| || ||||||| |||||||||| ||||| |||| TGATAAGAAA GTAGAGTGGT TGTTGGTGAA GGGAGAAGAG AGGGATTTGT TGGTGGATAA 659 AGGAAGAGTA GTAGTAATAG AAGAAGAAGA 16934 | || | ||| || || ||||||||| TAAAGGAAGA GTATTAGGAG TAGAAGAAGA 689 hqPGS_C08HBa0336I24.1+_SGN-E326119- (16248 16934) ******************************************************************************** EST sequence 313 -strand 690 n (File: SGN-E343367-) 1 CCAGTAAGGT AAAGCAAAAG TTGGATCATT AATAAGTGAC CCCAATATCC TTTCGTAAAA 61 GTACAAGTAC CATCTATGGA ACGGAAAGAA AAGCCACGAG AAATGAACTT GCAATTCTTT 121 ACCACCAATT TTATAAGCAC CGTTACAATA AGCACAATGA ATATTAGCTT GTTGTTTAAA 181 CCCAAGAGGG TCAAAAGGGT CTTTATCAAG TTCCCTCATT CGACTTGTAG CCAATTGATA 241 CTTGGCTACG TACTCCTCAT CCGCCGCATG AGCAGGGGGG CGGATGCGGA GTTTCGTCAT 301 AGGAGGGAAC TTGTAGTACG GAACGCTATC GATATCATCA GGTACAGGAG GGCAACAACT 361 GTATGAGACT TCAGTACCTT TATCATCTAT ATGGGCAACA CCACAAGATT TGAGATCAGG 421 TGGTGGTATA GGAGCAGCAG AGGCTAATGG TGCAAGATTA GCTGCACCAT AAAAACCTCC 481 TAACCCTAAA AGAACATTTC TCCTATCAAC AGCGTCAAGG TTTTTGTCAT GCTCGCCAAC 541 GTTGCATGAA ACCTTGAAAC TTTGACAGCG CCTTCCATGG AGGAAAGGTT GAGAGGGTTT 601 TGATAAGAAA GTAGAGTGGT TGTTGGTGAA GGGAGAAGAG AGGGATTTGT TGGTGGATAA 661 TAAAGGAAGA GTATTAGGAG TAGAAGAAGA Predicted gene structure (within gDNA segment 15638 to 19289): Exon 1 16248 16934 ( 687 n); cDNA 1 690 ( 690 n); score: 0.890 MATCH C08HBa0336I24.1+ SGN-E343367- 0.890 687 0.996 C PGS_C08HBa0336I24.1+_SGN-E343367- (16248 16934) Alignment (genomic DNA sequence = upper lines): CCAGTAAGGT AAAGCAAAAG TTGGATCATT AATAAGTGAT CCCAAAATTC TTTCGTAAAA 16307 |||||||||| |||||||||| |||||||||| ||||||||| ||||| || | |||||||||| CCAGTAAGGT AAAGCAAAAG TTGGATCATT AATAAGTGAC CCCAATATCC TTTCGTAAAA 60 GTACAAGTAC CATCTATGAA AGGGAAAGAA AAGCCACGAG AAATGAACTT GCAATTCTTT 16367 |||||||||| |||||||| | | |||||||| |||||||||| |||||||||| |||||||||| GTACAAGTAC CATCTATGGA ACGGAAAGAA AAGCCACGAG AAATGAACTT GCAATTCTTT 120 ACCACCAACT TTGTAAGCAC CGTTGCAATA AGCACAATGA ATATTAGCTT GTTGTTTAAA 16427 |||||||| | || ||||||| |||| ||||| |||||||||| |||||||||| |||||||||| ACCACCAATT TTATAAGCAC CGTTACAATA AGCACAATGA ATATTAGCTT GTTGTTTAAA 180 GCCAAGAGGG TCAAAGGGGT CTTTATCAAG TTCCCTCATT CGACTCGTAG CCAATTGATA 16487 ||||||||| ||||| |||| |||||||||| |||||||||| ||||| |||| |||||||||| CCCAAGAGGG TCAAAAGGGT CTTTATCAAG TTCCCTCATT CGACTTGTAG CCAATTGATA 240 CTTGGCTACG TACTCCTCAT CCGCCGCATG AGCAGGGGGG CGGATGCGGA GTTTAGTCAT 16547 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| CTTGGCTACG TACTCCTCAT CCGCCGCATG AGCAGGGGGG CGGATGCGGA GTTTCGTCAT 300 AGAAGGGAAC TTGTAGTACG GAACACTATC GATATCATCG GGTACAGGAG GGCAACAACT 16607 || ||||||| |||||||||| |||| ||||| ||||||||| |||||||||| |||||||||| AGGAGGGAAC TTGTAGTACG GAACGCTATC GATATCATCA GGTACAGGAG GGCAACAACT 360 GTATATTACA TCAACACC-- T-TCTTTTAC ATGGGCAGTA CCACAAGACT TGAGATCAGG 16664 |||| || ||| ||| | || | || ||||||| | |||||||| | |||||||||| GTATGAGACT TCAGTACCTT TATCATCTAT ATGGGCAACA CCACAAGATT TGAGATCAGG 420 AGGTGGTATA GGTGCAGCAG TCGCTAATGG TGCAAGATTA GCTGCACCAT AAAGACCTCC 16724 ||||||||| || ||||||| |||||||| |||||||||| |||||||||| ||| |||||| TGGTGGTATA GGAGCAGCAG AGGCTAATGG TGCAAGATTA GCTGCACCAT AAAAACCTCC 480 TAACCCTAAA AGAACGTTTC GTCTATCAAC AGCGTCAGGG TTTTTGTCAA CGTTGTTTGC 16784 |||||||||| ||||| |||| |||||||| ||||||| || ||||||||| | | | TAACCCTAAA AGAACATTTC TCCTATCAAC AGCGTCAAGG TTTTTGTCAT GCTCGCCAAC 540 GTTGCATGAA ACCTTGAAAC TTTGATTACG CCTTCCGTGG AGGAAAAGTT GAGAGGGTTT 16844 |||||||||| |||||||||| ||||| || |||||| ||| |||||| ||| |||||||||| GTTGCATGAA ACCTTGAAAC TTTGACAGCG CCTTCCATGG AGGAAAGGTT GAGAGGGTTT 600 TGATAACAAG GATGAGTTGG TGGTGGTGAA GGAAGAAGAG AGGGATTTGT TGGTGCATAA 16904 |||||| || | |||| | || ||||||| || ||||||| |||||||||| ||||| |||| TGATAAGAAA GTAGAGTGGT TGTTGGTGAA GGGAGAAGAG AGGGATTTGT TGGTGGATAA 660 AGGAAGAGTA GTAGTAATAG AAGAAGAAGA 16934 | || | ||| || || ||||||||| TAAAGGAAGA GTATTAGGAG TAGAAGAAGA 690 hqPGS_C08HBa0336I24.1+_SGN-E343367- (16248 16934) ******************************************************************************** EST sequence 175 -strand 689 n (File: SGN-E317091-) 1 CCAGTAAGGT AAAGCAAAAG TTGGATCATT AATAAGTGAC CCCAATATCC TTTCGTAAAA 61 GTACAAGTAC CATCTATGGA ACGGAAAGAA AAGCCACGAG AAATGAACTT GCAATTCTTT 121 ACCACCAATT TTATAAGCAC CGTTACAATA AGCACAATGA ATATTAGCTT GTTGTTTAAA 181 CCCAAGAGGG TCAAAAGGGT CTTTATCAAG TTCCCTCATT CGACTTGTAG CCAATTGATA 241 CTTGGCTACG TACTCCTCAT CCGCCGCATG AGCAGGGGGG CGGATGCGGA GTTTCGTCAT 301 AGGAGGGAAC TTGTAGTACG GAACGCTATC GATATCATCA GGTACAGGAG GGCAACAACT 361 GTATGAGACT TCAGTACCTT TATCATCTAT ATGGGCAACA CCACAAGATT TGAGATCAGG 421 TGGTGGTATA GGAGCAGCAG AGGCTAATGG TGCAAGATTA GCTGCACCAT AAAAACCTCC 481 TAACCCTAAA AGAACATTTC TCCTATCAAC AGCGTCAAGG TTTTTGTCAT GCTCGCCAAC 541 GTTGCATGAA ACCTTGAAAC TTTGACAGCG CCTTCCATGG AGGAAAGGTT GAGAGGGTTT 601 TGATAAGAAA GTAGAGTGGT TGTTGGTGAA GGGAGAAGAG AGGGATTTGT TGGTGGATAA 661 TAAAGGAAGA GTATTAGGAG TAGAAGAAG Predicted gene structure (within gDNA segment 15638 to 19279): Exon 1 16248 16933 ( 686 n); cDNA 1 689 ( 689 n); score: 0.890 MATCH C08HBa0336I24.1+ SGN-E317091- 0.890 686 0.996 C PGS_C08HBa0336I24.1+_SGN-E317091- (16248 16933) Alignment (genomic DNA sequence = upper lines): CCAGTAAGGT AAAGCAAAAG TTGGATCATT AATAAGTGAT CCCAAAATTC TTTCGTAAAA 16307 |||||||||| |||||||||| |||||||||| ||||||||| ||||| || | |||||||||| CCAGTAAGGT AAAGCAAAAG TTGGATCATT AATAAGTGAC CCCAATATCC TTTCGTAAAA 60 GTACAAGTAC CATCTATGAA AGGGAAAGAA AAGCCACGAG AAATGAACTT GCAATTCTTT 16367 |||||||||| |||||||| | | |||||||| |||||||||| |||||||||| |||||||||| GTACAAGTAC CATCTATGGA ACGGAAAGAA AAGCCACGAG AAATGAACTT GCAATTCTTT 120 ACCACCAACT TTGTAAGCAC CGTTGCAATA AGCACAATGA ATATTAGCTT GTTGTTTAAA 16427 |||||||| | || ||||||| |||| ||||| |||||||||| |||||||||| |||||||||| ACCACCAATT TTATAAGCAC CGTTACAATA AGCACAATGA ATATTAGCTT GTTGTTTAAA 180 GCCAAGAGGG TCAAAGGGGT CTTTATCAAG TTCCCTCATT CGACTCGTAG CCAATTGATA 16487 ||||||||| ||||| |||| |||||||||| |||||||||| ||||| |||| |||||||||| CCCAAGAGGG TCAAAAGGGT CTTTATCAAG TTCCCTCATT CGACTTGTAG CCAATTGATA 240 CTTGGCTACG TACTCCTCAT CCGCCGCATG AGCAGGGGGG CGGATGCGGA GTTTAGTCAT 16547 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| CTTGGCTACG TACTCCTCAT CCGCCGCATG AGCAGGGGGG CGGATGCGGA GTTTCGTCAT 300 AGAAGGGAAC TTGTAGTACG GAACACTATC GATATCATCG GGTACAGGAG GGCAACAACT 16607 || ||||||| |||||||||| |||| ||||| ||||||||| |||||||||| |||||||||| AGGAGGGAAC TTGTAGTACG GAACGCTATC GATATCATCA GGTACAGGAG GGCAACAACT 360 GTATATTACA TCAACACC-- T-TCTTTTAC ATGGGCAGTA CCACAAGACT TGAGATCAGG 16664 |||| || ||| ||| | || | || ||||||| | |||||||| | |||||||||| GTATGAGACT TCAGTACCTT TATCATCTAT ATGGGCAACA CCACAAGATT TGAGATCAGG 420 AGGTGGTATA GGTGCAGCAG TCGCTAATGG TGCAAGATTA GCTGCACCAT AAAGACCTCC 16724 ||||||||| || ||||||| |||||||| |||||||||| |||||||||| ||| |||||| TGGTGGTATA GGAGCAGCAG AGGCTAATGG TGCAAGATTA GCTGCACCAT AAAAACCTCC 480 TAACCCTAAA AGAACGTTTC GTCTATCAAC AGCGTCAGGG TTTTTGTCAA CGTTGTTTGC 16784 |||||||||| ||||| |||| |||||||| ||||||| || ||||||||| | | | TAACCCTAAA AGAACATTTC TCCTATCAAC AGCGTCAAGG TTTTTGTCAT GCTCGCCAAC 540 GTTGCATGAA ACCTTGAAAC TTTGATTACG CCTTCCGTGG AGGAAAAGTT GAGAGGGTTT 16844 |||||||||| |||||||||| ||||| || |||||| ||| |||||| ||| |||||||||| GTTGCATGAA ACCTTGAAAC TTTGACAGCG CCTTCCATGG AGGAAAGGTT GAGAGGGTTT 600 TGATAACAAG GATGAGTTGG TGGTGGTGAA GGAAGAAGAG AGGGATTTGT TGGTGCATAA 16904 |||||| || | |||| | || ||||||| || ||||||| |||||||||| ||||| |||| TGATAAGAAA GTAGAGTGGT TGTTGGTGAA GGGAGAAGAG AGGGATTTGT TGGTGGATAA 660 AGGAAGAGTA GTAGTAATAG AAGAAGAAG 16933 | || | ||| || || |||||||| TAAAGGAAGA GTATTAGGAG TAGAAGAAG 689 hqPGS_C08HBa0336I24.1+_SGN-E317091- (16248 16933) ******************************************************************************** EST sequence 193 -strand 690 n (File: SGN-E317449-) 1 TCCCAGTAAG GTAAAGCAAA AGTTGGATCA TTAATAAGTG ACCCCAATAT CCTTTCGTAA 61 AAGTACAAGT ACCATCTATG AAACGGAAAG AAAAGCCACG AGAAATGAAC TTGCAATTCT 121 TTACCACCAA TTTTATAAGC ACCGTTACAA TAAGCACAAT GAATATTAGC TTGTTGTTTA 181 AACCCAAGAG GGTCAAAAGG GTCTTTATCA AGTTCCCTCA TTCGACTTGT AGCCAATTGA 241 TACTTGGCTA CGTACTCCTC ATCCGCCGCA TGAGCAGGGG GGCGGATGCG GAGTTTCGTC 301 ATAGGAGGGA ACTTGTAGTA CGGAACGCTA TCGATATCAT CAGGTACAGG AGGGCAACAA 361 CTGTATGAGA CTTCAGTACC TTTATCATCT ATATGGGCAA CACCACAAGA TTTGAGATCA 421 GGTGGTGGTA TAGGAGCAGC AGAGGCTAAT GGTGCAAGAT TAGCTGCACC ATAAAAACCT 481 CCTAACCCTA AAAGAACATT TCTCCTATCA ACAGCGTCAA GGTTTTTGTC ATGCTCGCCA 541 ACGTTGCATG AAACCTTGAA ACTTTGACAG CGCCTTCCAT GGAGGAAAGG TTGAGAGGGT 601 TTTGATAAGA AAGTAGAGTG GTTGTTGGTG AAGGGAGAAG AGAGGGATTT GTTGGTGGAT 661 AATAAAGGAA GAGTATTAGG AGTAGAAGAA Predicted gene structure (within gDNA segment 15618 to 19269): Exon 1 16248 16932 ( 685 n); cDNA 3 690 ( 688 n); score: 0.891 MATCH C08HBa0336I24.1+ SGN-E317449- 0.891 685 0.993 C PGS_C08HBa0336I24.1+_SGN-E317449- (16248 16932) Alignment (genomic DNA sequence = upper lines): CCAGTAAGGT AAAGCAAAAG TTGGATCATT AATAAGTGAT CCCAAAATTC TTTCGTAAAA 16307 |||||||||| |||||||||| |||||||||| ||||||||| ||||| || | |||||||||| CCAGTAAGGT AAAGCAAAAG TTGGATCATT AATAAGTGAC CCCAATATCC TTTCGTAAAA 62 GTACAAGTAC CATCTATGAA AGGGAAAGAA AAGCCACGAG AAATGAACTT GCAATTCTTT 16367 |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| GTACAAGTAC CATCTATGAA ACGGAAAGAA AAGCCACGAG AAATGAACTT GCAATTCTTT 122 ACCACCAACT TTGTAAGCAC CGTTGCAATA AGCACAATGA ATATTAGCTT GTTGTTTAAA 16427 |||||||| | || ||||||| |||| ||||| |||||||||| |||||||||| |||||||||| ACCACCAATT TTATAAGCAC CGTTACAATA AGCACAATGA ATATTAGCTT GTTGTTTAAA 182 GCCAAGAGGG TCAAAGGGGT CTTTATCAAG TTCCCTCATT CGACTCGTAG CCAATTGATA 16487 ||||||||| ||||| |||| |||||||||| |||||||||| ||||| |||| |||||||||| CCCAAGAGGG TCAAAAGGGT CTTTATCAAG TTCCCTCATT CGACTTGTAG CCAATTGATA 242 CTTGGCTACG TACTCCTCAT CCGCCGCATG AGCAGGGGGG CGGATGCGGA GTTTAGTCAT 16547 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| CTTGGCTACG TACTCCTCAT CCGCCGCATG AGCAGGGGGG CGGATGCGGA GTTTCGTCAT 302 AGAAGGGAAC TTGTAGTACG GAACACTATC GATATCATCG GGTACAGGAG GGCAACAACT 16607 || ||||||| |||||||||| |||| ||||| ||||||||| |||||||||| |||||||||| AGGAGGGAAC TTGTAGTACG GAACGCTATC GATATCATCA GGTACAGGAG GGCAACAACT 362 GTATATTACA TCAACACC-- T-TCTTTTAC ATGGGCAGTA CCACAAGACT TGAGATCAGG 16664 |||| || ||| ||| | || | || ||||||| | |||||||| | |||||||||| GTATGAGACT TCAGTACCTT TATCATCTAT ATGGGCAACA CCACAAGATT TGAGATCAGG 422 AGGTGGTATA GGTGCAGCAG TCGCTAATGG TGCAAGATTA GCTGCACCAT AAAGACCTCC 16724 ||||||||| || ||||||| |||||||| |||||||||| |||||||||| ||| |||||| TGGTGGTATA GGAGCAGCAG AGGCTAATGG TGCAAGATTA GCTGCACCAT AAAAACCTCC 482 TAACCCTAAA AGAACGTTTC GTCTATCAAC AGCGTCAGGG TTTTTGTCAA CGTTGTTTGC 16784 |||||||||| ||||| |||| |||||||| ||||||| || ||||||||| | | | TAACCCTAAA AGAACATTTC TCCTATCAAC AGCGTCAAGG TTTTTGTCAT GCTCGCCAAC 542 GTTGCATGAA ACCTTGAAAC TTTGATTACG CCTTCCGTGG AGGAAAAGTT GAGAGGGTTT 16844 |||||||||| |||||||||| ||||| || |||||| ||| |||||| ||| |||||||||| GTTGCATGAA ACCTTGAAAC TTTGACAGCG CCTTCCATGG AGGAAAGGTT GAGAGGGTTT 602 TGATAACAAG GATGAGTTGG TGGTGGTGAA GGAAGAAGAG AGGGATTTGT TGGTGCATAA 16904 |||||| || | |||| | || ||||||| || ||||||| |||||||||| ||||| |||| TGATAAGAAA GTAGAGTGGT TGTTGGTGAA GGGAGAAGAG AGGGATTTGT TGGTGGATAA 662 AGGAAGAGTA GTAGTAATAG AAGAAGAA 16932 | || | ||| || || ||||||| TAAAGGAAGA GTATTAGGAG TAGAAGAA 690 hqPGS_C08HBa0336I24.1+_SGN-E317449- (16248 16932) ******************************************************************************** EST sequence 206 -strand 675 n (File: SGN-E318179-) 1 TTCCCAGTAA GGTAAAGCAA AAGTTGGATC ATTAATAAGT GATCCCAAAA TTCTGTCGTA 61 AAAGTACAAG TACCATCTAT GAAAGTGAAA GAAAAGCCAC GAGAAATGAA CTTGCATTTC 121 TATACCACCA GCTTTGTAAG CACCGTTGCA ATAAGCACAA TGAATATTAG CTTGTTGTTT 181 AAAGCCAAGA GGGTCAAAGG GGTCTTTATC AAGTTCCCTC ATTCGACTCG TAGCCAATTG 241 ATACTTGGAT ACGTACTCCT CATCTGCCGC ATGAGCAGGG GGGCGGATGC GGAGTTTAGT 301 CATAGAAGGG ATCTTGTAGT ACGGAACACT ATCGATATCA TCGGGTACAG GAGGGCAACA 361 ACTGTATATT ACATCAACAC CTTCTTTTAC ATGGGCAGTA CCACAAGACT TGAGATCAGG 421 AGGTGGTATA GGTGCAGCAG TCGCTAATGG TGCAAGATTA GCTGCACCAT AAAGACCTCC 481 TAACCTTAAA AGAACGTTTC GTCTATCAAC AGCGTCAGGG TTTTTGTCAA CGTTGTTTGT 541 GTTGCATGAA ACCTTGAAAC TTTGATTACG CCTTCCGTGG AGGAAAAGTT GAGAGGGTTT 601 TGATAACAAG GATGAGTTGG TGGTGGTGAA GGAAGAAGAG AGGGATTTGT TGGTGCATAA 661 AGGAAGAGTA GTAGC Predicted gene structure (within gDNA segment 15608 to 17528): Exon 1 16248 16918 ( 671 n); cDNA 4 674 ( 671 n); score: 0.985 MATCH C08HBa0336I24.1+ SGN-E318179- 0.985 671 0.994 C PGS_C08HBa0336I24.1+_SGN-E318179- (16248 16918) Alignment (genomic DNA sequence = upper lines): CCAGTAAGGT AAAGCAAAAG TTGGATCATT AATAAGTGAT CCCAAAATTC TTTCGTAAAA 16307 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| CCAGTAAGGT AAAGCAAAAG TTGGATCATT AATAAGTGAT CCCAAAATTC TGTCGTAAAA 63 GTACAAGTAC CATCTATGAA AGGGAAAGAA AAGCCACGAG AAATGAACTT GCAATTCTTT 16367 |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| ||| |||| | GTACAAGTAC CATCTATGAA AGTGAAAGAA AAGCCACGAG AAATGAACTT GCATTTCTAT 123 ACCACCAACT TTGTAAGCAC CGTTGCAATA AGCACAATGA ATATTAGCTT GTTGTTTAAA 16427 ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCACCAGCT TTGTAAGCAC CGTTGCAATA AGCACAATGA ATATTAGCTT GTTGTTTAAA 183 GCCAAGAGGG TCAAAGGGGT CTTTATCAAG TTCCCTCATT CGACTCGTAG CCAATTGATA 16487 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCAAGAGGG TCAAAGGGGT CTTTATCAAG TTCCCTCATT CGACTCGTAG CCAATTGATA 243 CTTGGCTACG TACTCCTCAT CCGCCGCATG AGCAGGGGGG CGGATGCGGA GTTTAGTCAT 16547 ||||| |||| |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| CTTGGATACG TACTCCTCAT CTGCCGCATG AGCAGGGGGG CGGATGCGGA GTTTAGTCAT 303 AGAAGGGAAC TTGTAGTACG GAACACTATC GATATCATCG GGTACAGGAG GGCAACAACT 16607 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAGGGATC TTGTAGTACG GAACACTATC GATATCATCG GGTACAGGAG GGCAACAACT 363 GTATATTACA TCAACACCTT CTTTTACATG GGCAGTACCA CAAGACTTGA GATCAGGAGG 16667 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTATATTACA TCAACACCTT CTTTTACATG GGCAGTACCA CAAGACTTGA GATCAGGAGG 423 TGGTATAGGT GCAGCAGTCG CTAATGGTGC AAGATTAGCT GCACCATAAA GACCTCCTAA 16727 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTATAGGT GCAGCAGTCG CTAATGGTGC AAGATTAGCT GCACCATAAA GACCTCCTAA 483 CCCTAAAAGA ACGTTTCGTC TATCAACAGC GTCAGGGTTT TTGTCAACGT TGTTTGCGTT 16787 || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| CCTTAAAAGA ACGTTTCGTC TATCAACAGC GTCAGGGTTT TTGTCAACGT TGTTTGTGTT 543 GCATGAAACC TTGAAACTTT GATTACGCCT TCCGTGGAGG AAAAGTTGAG AGGGTTTTGA 16847 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCATGAAACC TTGAAACTTT GATTACGCCT TCCGTGGAGG AAAAGTTGAG AGGGTTTTGA 603 TAACAAGGAT GAGTTGGTGG TGGTGAAGGA AGAAGAGAGG GATTTGTTGG TGCATAAAGG 16907 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAACAAGGAT GAGTTGGTGG TGGTGAAGGA AGAAGAGAGG GATTTGTTGG TGCATAAAGG 663 AAGAGTAGTA G 16918 |||||||||| | AAGAGTAGTA G 674 hqPGS_C08HBa0336I24.1+_SGN-E318179- (16248 16918) ******************************************************************************** EST sequence 134 -strand 687 n (File: SGN-E316169-) 1 AGTAAGGTAA AGCAAAAGTT GGATCATTAA TAAGTGACCC CAATATCCTT TCGTAAAAGT 61 ACAAGTACCA TCTATGGAAC GGAAAGAAAA GCCACGAGAA ATGAACTTGC AATTCTTTAC 121 CACCAATTTT ATAAGCACCG TTACAATAAG CACAATGAAT ATTAGCTTGT TGTTTAAACC 181 CAAGAGGGTC AAAAGGGTCT TTATCAAGTT CCCTCATTCG ACTTGTAGCC AATTGATACT 241 TGGCTACGTA CTCCTCATCC GCCGCATGAG CAGGGGGGCG GATGCGGAGT TTCGTCATAG 301 GAGGGAACTT GTAGTACGGA ACGCTATCGA TATCATCAGG TACAGGAGGG CAACAACTGT 361 ATGAGACTTC AGTACCTTTA TCATCTATAT GGGCAACACC ACAAGATTTG AGATCAGGTG 421 GTGGTATAGG AGCAGCAGAG GCTAATGGTG CAAGATTAGC TGCACCATAA AAACCTCCTA 481 ACCCTAAAAG AACATTTCTC CTATCAACAG CGTCAAGGTT TTTGTCATGC TCGCCAACGT 541 TGCATGAAAC CTTGAAACTT TGACAGCGCC TTCCATGGAG GAAAGGTTGA GAGGGTTTTG 601 ATAAGAAAGT AGAGTGGTTG TTGGTGAAGG GAGAAGAGAG GGATTTGTTG GTGGATAATA 661 AAGGAAGAGT ATTAGGAGTA GAAGAAG Predicted gene structure (within gDNA segment 15640 to 19279): Exon 1 16250 16933 ( 684 n); cDNA 1 687 ( 687 n); score: 0.890 MATCH C08HBa0336I24.1+ SGN-E316169- 0.890 684 0.996 C PGS_C08HBa0336I24.1+_SGN-E316169- (16250 16933) Alignment (genomic DNA sequence = upper lines): AGTAAGGTAA AGCAAAAGTT GGATCATTAA TAAGTGATCC CAAAATTCTT TCGTAAAAGT 16309 |||||||||| |||||||||| |||||||||| ||||||| || ||| || ||| |||||||||| AGTAAGGTAA AGCAAAAGTT GGATCATTAA TAAGTGACCC CAATATCCTT TCGTAAAAGT 60 ACAAGTACCA TCTATGAAAG GGAAAGAAAA GCCACGAGAA ATGAACTTGC AATTCTTTAC 16369 |||||||||| |||||| || |||||||||| |||||||||| |||||||||| |||||||||| ACAAGTACCA TCTATGGAAC GGAAAGAAAA GCCACGAGAA ATGAACTTGC AATTCTTTAC 120 CACCAACTTT GTAAGCACCG TTGCAATAAG CACAATGAAT ATTAGCTTGT TGTTTAAAGC 16429 |||||| ||| ||||||||| || ||||||| |||||||||| |||||||||| |||||||| | CACCAATTTT ATAAGCACCG TTACAATAAG CACAATGAAT ATTAGCTTGT TGTTTAAACC 180 CAAGAGGGTC AAAGGGGTCT TTATCAAGTT CCCTCATTCG ACTCGTAGCC AATTGATACT 16489 |||||||||| ||| |||||| |||||||||| |||||||||| ||| |||||| |||||||||| CAAGAGGGTC AAAAGGGTCT TTATCAAGTT CCCTCATTCG ACTTGTAGCC AATTGATACT 240 TGGCTACGTA CTCCTCATCC GCCGCATGAG CAGGGGGGCG GATGCGGAGT TTAGTCATAG 16549 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| TGGCTACGTA CTCCTCATCC GCCGCATGAG CAGGGGGGCG GATGCGGAGT TTCGTCATAG 300 AAGGGAACTT GTAGTACGGA ACACTATCGA TATCATCGGG TACAGGAGGG CAACAACTGT 16609 ||||||||| |||||||||| || ||||||| ||||||| || |||||||||| |||||||||| GAGGGAACTT GTAGTACGGA ACGCTATCGA TATCATCAGG TACAGGAGGG CAACAACTGT 360 ATATTACATC AACACC--T- TCTTTTACAT GGGCAGTACC ACAAGACTTG AGATCAGGAG 16666 || || || | ||| | || | || || ||||| ||| |||||| ||| |||||||| | ATGAGACTTC AGTACCTTTA TCATCTATAT GGGCAACACC ACAAGATTTG AGATCAGGTG 420 GTGGTATAGG TGCAGCAGTC GCTAATGGTG CAAGATTAGC TGCACCATAA AGACCTCCTA 16726 |||||||||| ||||||| |||||||||| |||||||||| |||||||||| | |||||||| GTGGTATAGG AGCAGCAGAG GCTAATGGTG CAAGATTAGC TGCACCATAA AAACCTCCTA 480 ACCCTAAAAG AACGTTTCGT CTATCAACAG CGTCAGGGTT TTTGTCAACG TTGTTTGCGT 16786 |||||||||| ||| |||| |||||||||| ||||| |||| ||||||| | | ||| ACCCTAAAAG AACATTTCTC CTATCAACAG CGTCAAGGTT TTTGTCATGC TCGCCAACGT 540 TGCATGAAAC CTTGAAACTT TGATTACGCC TTCCGTGGAG GAAAAGTTGA GAGGGTTTTG 16846 |||||||||| |||||||||| ||| |||| |||| ||||| |||| ||||| |||||||||| TGCATGAAAC CTTGAAACTT TGACAGCGCC TTCCATGGAG GAAAGGTTGA GAGGGTTTTG 600 ATAACAAGGA TGAGTTGGTG GTGGTGAAGG AAGAAGAGAG GGATTTGTTG GTGCATAAAG 16906 |||| || | |||| | || ||||||||| ||||||||| |||||||||| ||| |||| ATAAGAAAGT AGAGTGGTTG TTGGTGAAGG GAGAAGAGAG GGATTTGTTG GTGGATAATA 660 GAAGAGTAGT AGTAATAGAA GAAGAAG 16933 | || ||| | || || | ||||||| AAGGAAGAGT ATTAGGAGTA GAAGAAG 687 hqPGS_C08HBa0336I24.1+_SGN-E316169- (16250 16933) ******************************************************************************** EST sequence 328 -strand 694 n (File: SGN-E323178-) 1 GTAAGGTAAA GCAAAAGTTG GATCATTAAT AAGTGACCCC AATATCCTTT CGTAAAAGTA 61 CAAGTACCAT CTATGGAACG GAAAGAAAAG CCACGAGAAA TGAACTTGCA ATTCTTTACC 121 ACCAATTTTA TAAGCACCGT TACAATAAGC ACAATGAATA TTAGCTTGTT GTTTAAACCC 181 AAGAGGGTCA AAAGGGTCTT TATCAAGTTC CCTCATTCGA CTTGTAGCCA ATTGATACTT 241 GGCTACGTAC TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT TCGTCATAGG 301 AGGGAACTTG TAGTACGGAA CGCTATCGAT ATCATCAGGT ACAGGAGGGC AACAACTGTA 361 TGAGACTTCA GTACCTTTAT CATCTATATG GGCAACACCA CAAGATTTGA GATCAGGTGG 421 TGGTATAGGA GCAGCAGAGG CTAATGGTGC AAGATTAGCT GCACCATAAA AACCTCCTAA 481 CCCTAAAAGA ACATTTCTCC TATCAACAGC GTCAAGGTTT TTGTCATGCT CGCCAACGTT 541 GCATGAAACC TTGAAACTTT GACAGCGCCT TCCATGGAGG AAAGGTTGAG AGGGTTTTGA 601 TAAGAAAGTA GAGTGGTTGT TGGTGAAGGG AGAAGAGAGG GATTTGTTGG TGGATAATAA 661 AGGAAGAGTA TTAGGAGTAG AAGAAGACAT TGTA Predicted gene structure (within gDNA segment 15641 to 19359): Exon 1 16251 16943 ( 693 n); cDNA 1 693 ( 693 n); score: 0.892 MATCH C08HBa0336I24.1+ SGN-E323178- 0.892 693 0.999 C PGS_C08HBa0336I24.1+_SGN-E323178- (16251 16943) Alignment (genomic DNA sequence = upper lines): GTAAGGTAAA GCAAAAGTTG GATCATTAAT AAGTGATCCC AAAATTCTTT CGTAAAAGTA 16310 |||||||||| |||||||||| |||||||||| |||||| ||| || || |||| |||||||||| GTAAGGTAAA GCAAAAGTTG GATCATTAAT AAGTGACCCC AATATCCTTT CGTAAAAGTA 60 CAAGTACCAT CTATGAAAGG GAAAGAAAAG CCACGAGAAA TGAACTTGCA ATTCTTTACC 16370 |||||||||| ||||| || | |||||||||| |||||||||| |||||||||| |||||||||| CAAGTACCAT CTATGGAACG GAAAGAAAAG CCACGAGAAA TGAACTTGCA ATTCTTTACC 120 ACCAACTTTG TAAGCACCGT TGCAATAAGC ACAATGAATA TTAGCTTGTT GTTTAAAGCC 16430 ||||| ||| |||||||||| | |||||||| |||||||||| |||||||||| ||||||| || ACCAATTTTA TAAGCACCGT TACAATAAGC ACAATGAATA TTAGCTTGTT GTTTAAACCC 180 AAGAGGGTCA AAGGGGTCTT TATCAAGTTC CCTCATTCGA CTCGTAGCCA ATTGATACTT 16490 |||||||||| || ||||||| |||||||||| |||||||||| || ||||||| |||||||||| AAGAGGGTCA AAAGGGTCTT TATCAAGTTC CCTCATTCGA CTTGTAGCCA ATTGATACTT 240 GGCTACGTAC TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT TAGTCATAGA 16550 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | ||||||| GGCTACGTAC TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT TCGTCATAGG 300 AGGGAACTTG TAGTACGGAA CACTATCGAT ATCATCGGGT ACAGGAGGGC AACAACTGTA 16610 |||||||||| |||||||||| | |||||||| |||||| ||| |||||||||| |||||||||| AGGGAACTTG TAGTACGGAA CGCTATCGAT ATCATCAGGT ACAGGAGGGC AACAACTGTA 360 TATTACATCA ACACC--T-T CTTTTACATG GGCAGTACCA CAAGACTTGA GATCAGGAGG 16667 | || ||| ||| | | | | || ||| |||| |||| ||||| |||| ||||||| || TGAGACTTCA GTACCTTTAT CATCTATATG GGCAACACCA CAAGATTTGA GATCAGGTGG 420 TGGTATAGGT GCAGCAGTCG CTAATGGTGC AAGATTAGCT GCACCATAAA GACCTCCTAA 16727 ||||||||| ||||||| | |||||||||| |||||||||| |||||||||| ||||||||| TGGTATAGGA GCAGCAGAGG CTAATGGTGC AAGATTAGCT GCACCATAAA AACCTCCTAA 480 CCCTAAAAGA ACGTTTCGTC TATCAACAGC GTCAGGGTTT TTGTCAACGT TGTTTGCGTT 16787 |||||||||| || |||| | |||||||||| |||| ||||| |||||| | | |||| CCCTAAAAGA ACATTTCTCC TATCAACAGC GTCAAGGTTT TTGTCATGCT CGCCAACGTT 540 GCATGAAACC TTGAAACTTT GATTACGCCT TCCGTGGAGG AAAAGTTGAG AGGGTTTTGA 16847 |||||||||| |||||||||| || ||||| ||| |||||| ||| |||||| |||||||||| GCATGAAACC TTGAAACTTT GACAGCGCCT TCCATGGAGG AAAGGTTGAG AGGGTTTTGA 600 TAACAAGGAT GAGTTGGTGG TGGTGAAGGA AGAAGAGAGG GATTTGTTGG TGCATAAAGG 16907 ||| || | |||| | || ||||||||| |||||||||| |||||||||| || || || TAAGAAAGTA GAGTGGTTGT TGGTGAAGGG AGAAGAGAGG GATTTGTTGG TGGAT-AATA 659 AAGAGTAGTA GTAATAGAAG AAGAAGAAGA CATTGT 16943 ||| | || | ||| ||| || ||||||||| |||||| AAG-GAAG-A GTATTAGGAG TAGAAGAAGA CATTGT 693 hqPGS_C08HBa0336I24.1+_SGN-E323178- (16251 16943) ******************************************************************************** EST sequence 189 -strand 683 n (File: SGN-E328019-) 1 GTAAGGTAAA GCAAAAGTTG GATCATTAAT AAGTGACCCC AATATCCTTT CGTAAAAGTA 61 CAAGTACCAT CTATGAACGG AAAGAAAAGC CACGAGAAAT GAACTTGCAA TTCTTTACCA 121 CCAATTTTAT AAGCACCGTT ACAATAAGCA CAATGAATAT TAGCTTGTTG TTTAAACCCA 181 AGAGGGTCAA AAGGGTCTTT ATCAAGTTCC CTCATTCGAC TTGTAGCCAA TTGATACTTG 241 GCTACGTACT CCTCATCCGC CGCATGAGCA GGGGGGCGGA TGCGGAGTTT CGTCATAGGA 301 GGGAACTTGT AGTACGGAAC GCTATCGATA TCATCAGGTA CAGGAGGGCA ACAACTGTAT 361 GAGACTTCAG TACCTTTATC ATCTATATGG GCAACACCAC AAGATTTGAG ATCAGGTGGT 421 GGTATAGGAG CAGCAGAGGC TAATGGTGCA AGATTAGCTG CACCATAAAA ACCTCCTAAC 481 CCTAAAAGAA CATTTCTCCT ATCAACAGCG TCAAGGTTTT TGTCATGCTC GCCAACGTTG 541 CATGAAACCT TGAAACTTTG ACAGCGCCTT CCATGGAGGA AAGGTTGAGA GGGTTTTGAT 601 AAGAAAGTAG AGTGGTTGTT GGTGAAGGGA GAAGAGAGGG ATTTGTTGGT GGATAATAAA 661 GGAAGAGTAT TAGGAGTAGA AGA Predicted gene structure (within gDNA segment 15641 to 19259): Exon 1 16251 16931 ( 681 n); cDNA 1 683 ( 683 n); score: 0.889 MATCH C08HBa0336I24.1+ SGN-E328019- 0.889 681 0.997 C PGS_C08HBa0336I24.1+_SGN-E328019- (16251 16931) Alignment (genomic DNA sequence = upper lines): GTAAGGTAAA GCAAAAGTTG GATCATTAAT AAGTGATCCC AAAATTCTTT CGTAAAAGTA 16310 |||||||||| |||||||||| |||||||||| |||||| ||| || || |||| |||||||||| GTAAGGTAAA GCAAAAGTTG GATCATTAAT AAGTGACCCC AATATCCTTT CGTAAAAGTA 60 CAAGTACCAT CTATGAAAGG GAAAGAAAAG CCACGAGAAA TGAACTTGCA ATTCTTTACC 16370 |||||||||| ||||| || | |||||||||| |||||||||| |||||||||| |||||||||| CAAGTACCAT CTATG-AACG GAAAGAAAAG CCACGAGAAA TGAACTTGCA ATTCTTTACC 119 ACCAACTTTG TAAGCACCGT TGCAATAAGC ACAATGAATA TTAGCTTGTT GTTTAAAGCC 16430 ||||| ||| |||||||||| | |||||||| |||||||||| |||||||||| ||||||| || ACCAATTTTA TAAGCACCGT TACAATAAGC ACAATGAATA TTAGCTTGTT GTTTAAACCC 179 AAGAGGGTCA AAGGGGTCTT TATCAAGTTC CCTCATTCGA CTCGTAGCCA ATTGATACTT 16490 |||||||||| || ||||||| |||||||||| |||||||||| || ||||||| |||||||||| AAGAGGGTCA AAAGGGTCTT TATCAAGTTC CCTCATTCGA CTTGTAGCCA ATTGATACTT 239 GGCTACGTAC TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT TAGTCATAGA 16550 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | ||||||| GGCTACGTAC TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT TCGTCATAGG 299 AGGGAACTTG TAGTACGGAA CACTATCGAT ATCATCGGGT ACAGGAGGGC AACAACTGTA 16610 |||||||||| |||||||||| | |||||||| |||||| ||| |||||||||| |||||||||| AGGGAACTTG TAGTACGGAA CGCTATCGAT ATCATCAGGT ACAGGAGGGC AACAACTGTA 359 TATTACATCA ACACC--T-T CTTTTACATG GGCAGTACCA CAAGACTTGA GATCAGGAGG 16667 | || ||| ||| | | | | || ||| |||| |||| ||||| |||| ||||||| || TGAGACTTCA GTACCTTTAT CATCTATATG GGCAACACCA CAAGATTTGA GATCAGGTGG 419 TGGTATAGGT GCAGCAGTCG CTAATGGTGC AAGATTAGCT GCACCATAAA GACCTCCTAA 16727 ||||||||| ||||||| | |||||||||| |||||||||| |||||||||| ||||||||| TGGTATAGGA GCAGCAGAGG CTAATGGTGC AAGATTAGCT GCACCATAAA AACCTCCTAA 479 CCCTAAAAGA ACGTTTCGTC TATCAACAGC GTCAGGGTTT TTGTCAACGT TGTTTGCGTT 16787 |||||||||| || |||| | |||||||||| |||| ||||| |||||| | | |||| CCCTAAAAGA ACATTTCTCC TATCAACAGC GTCAAGGTTT TTGTCATGCT CGCCAACGTT 539 GCATGAAACC TTGAAACTTT GATTACGCCT TCCGTGGAGG AAAAGTTGAG AGGGTTTTGA 16847 |||||||||| |||||||||| || ||||| ||| |||||| ||| |||||| |||||||||| GCATGAAACC TTGAAACTTT GACAGCGCCT TCCATGGAGG AAAGGTTGAG AGGGTTTTGA 599 TAACAAGGAT GAGTTGGTGG TGGTGAAGGA AGAAGAGAGG GATTTGTTGG TGCATAAAGG 16907 ||| || | |||| | || ||||||||| |||||||||| |||||||||| || |||| TAAGAAAGTA GAGTGGTTGT TGGTGAAGGG AGAAGAGAGG GATTTGTTGG TGGATAATAA 659 AAGAGTAGTA GTAATAGAAG AAGA 16931 | || |||| || || || |||| AGGAAGAGTA TTAGGAGTAG AAGA 683 hqPGS_C08HBa0336I24.1+_SGN-E328019- (16251 16931) ******************************************************************************** EST sequence 315 -strand 682 n (File: SGN-E334447-) 1 GTAAGGTAAA GCAAAGTTTG GATCATTAAT AAGTGACCCC AATATCCTTT CGTAAAAGTA 61 CAAGTACCAT CTATGGAACG GAAAGAAAAG CCACGAGAAA TGAACTTGCA ATTCTTTACC 121 ACCAATTTTA TAAGCACCGT TACAATAAGC ACAATGAATA TTAGCTTGTT GTTTAAACCC 181 AAGAGGGTCA AAAGGGTCTT TATCAAGTTC CCTCATTCGA CTTGTAGCCA ATTGATACTT 241 GGCTACGTAC TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT TCGTCATAGG 301 AGGGAACTTG TAGTACGGAA CGCTATCGAT ATCATCAGGT ACAGGAGGGC AACAACTGTA 361 TGAGACTTCA GTACCTTTAT CATCTATATG GGCAACACCA CAAGATTTGA GATCAGGTGG 421 TGGTATAGGA GCAGCAGAGG CTAATGGTGC AAGATTAGCT GCACCATAAA AACCTCCTAA 481 CCCTAAAAGA ACATTTCTCC TATCAACAGC GTCAAGGTTT TTGTCATGCT CGCCAACGTT 541 GCATGAAACC TTGAAACTTT GACAGCGCCT TCCATGGAGG AAAGGTTGAG AGGGTTTTGA 601 TAAGAAAGTA GAGTGGTTGT TGGTGAAGGG AGAAGAGAGG GATTTGTTGG TGGATAATAA 661 AGGAAGAGTA TTAGGAGTAG AA Predicted gene structure (within gDNA segment 15488 to 19239): Exon 1 16251 16929 ( 679 n); cDNA 1 682 ( 682 n); score: 0.886 MATCH C08HBa0336I24.1+ SGN-E334447- 0.886 679 0.996 C PGS_C08HBa0336I24.1+_SGN-E334447- (16251 16929) Alignment (genomic DNA sequence = upper lines): GTAAGGTAAA GCAAAAGTTG GATCATTAAT AAGTGATCCC AAAATTCTTT CGTAAAAGTA 16310 |||||||||| ||||| ||| |||||||||| |||||| ||| || || |||| |||||||||| GTAAGGTAAA GCAAAGTTTG GATCATTAAT AAGTGACCCC AATATCCTTT CGTAAAAGTA 60 CAAGTACCAT CTATGAAAGG GAAAGAAAAG CCACGAGAAA TGAACTTGCA ATTCTTTACC 16370 |||||||||| ||||| || | |||||||||| |||||||||| |||||||||| |||||||||| CAAGTACCAT CTATGGAACG GAAAGAAAAG CCACGAGAAA TGAACTTGCA ATTCTTTACC 120 ACCAACTTTG TAAGCACCGT TGCAATAAGC ACAATGAATA TTAGCTTGTT GTTTAAAGCC 16430 ||||| ||| |||||||||| | |||||||| |||||||||| |||||||||| ||||||| || ACCAATTTTA TAAGCACCGT TACAATAAGC ACAATGAATA TTAGCTTGTT GTTTAAACCC 180 AAGAGGGTCA AAGGGGTCTT TATCAAGTTC CCTCATTCGA CTCGTAGCCA ATTGATACTT 16490 |||||||||| || ||||||| |||||||||| |||||||||| || ||||||| |||||||||| AAGAGGGTCA AAAGGGTCTT TATCAAGTTC CCTCATTCGA CTTGTAGCCA ATTGATACTT 240 GGCTACGTAC TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT TAGTCATAGA 16550 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | ||||||| GGCTACGTAC TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT TCGTCATAGG 300 AGGGAACTTG TAGTACGGAA CACTATCGAT ATCATCGGGT ACAGGAGGGC AACAACTGTA 16610 |||||||||| |||||||||| | |||||||| |||||| ||| |||||||||| |||||||||| AGGGAACTTG TAGTACGGAA CGCTATCGAT ATCATCAGGT ACAGGAGGGC AACAACTGTA 360 TATTACATCA ACACC--T-T CTTTTACATG GGCAGTACCA CAAGACTTGA GATCAGGAGG 16667 | || ||| ||| | | | | || ||| |||| |||| ||||| |||| ||||||| || TGAGACTTCA GTACCTTTAT CATCTATATG GGCAACACCA CAAGATTTGA GATCAGGTGG 420 TGGTATAGGT GCAGCAGTCG CTAATGGTGC AAGATTAGCT GCACCATAAA GACCTCCTAA 16727 ||||||||| ||||||| | |||||||||| |||||||||| |||||||||| ||||||||| TGGTATAGGA GCAGCAGAGG CTAATGGTGC AAGATTAGCT GCACCATAAA AACCTCCTAA 480 CCCTAAAAGA ACGTTTCGTC TATCAACAGC GTCAGGGTTT TTGTCAACGT TGTTTGCGTT 16787 |||||||||| || |||| | |||||||||| |||| ||||| |||||| | | |||| CCCTAAAAGA ACATTTCTCC TATCAACAGC GTCAAGGTTT TTGTCATGCT CGCCAACGTT 540 GCATGAAACC TTGAAACTTT GATTACGCCT TCCGTGGAGG AAAAGTTGAG AGGGTTTTGA 16847 |||||||||| |||||||||| || ||||| ||| |||||| ||| |||||| |||||||||| GCATGAAACC TTGAAACTTT GACAGCGCCT TCCATGGAGG AAAGGTTGAG AGGGTTTTGA 600 TAACAAGGAT GAGTTGGTGG TGGTGAAGGA AGAAGAGAGG GATTTGTTGG TGCATAAAGG 16907 ||| || | |||| | || ||||||||| |||||||||| |||||||||| || |||| TAAGAAAGTA GAGTGGTTGT TGGTGAAGGG AGAAGAGAGG GATTTGTTGG TGGATAATAA 660 AAGAGTAGTA GTAATAGAAG AA 16929 | || |||| || || || || AGGAAGAGTA TTAGGAGTAG AA 682 hqPGS_C08HBa0336I24.1+_SGN-E334447- (16251 16929) ******************************************************************************** EST sequence 317 -strand 682 n (File: SGN-E334547-) 1 GTAAGGTAAA GCAAAAGTTG GATCATTAAT AAGTGACCCC AATATCCTTT CGTAAAAGTA 61 CAAGTACCAT CTATGGAACG GAAAGAAAAG CCACGAGAAA TGAACTTGCA TTTCTTTACC 121 ACCAATTTTA TAAGCACCGT TACAATAAGC ACAATGAATA TTAGCTTGTT GTTTAAACCC 181 AAGAGGGTCA AAAGGGTCTT TATCAAGTTC CCTCATTCGA CTTGTAGCCA ATTGATACTT 241 GGCTACGTAC TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT TCGTCATAGG 301 AGGGAACTTG TAGTACGGAA CGCTATCGAT ATCATCAGGT ACAGGAGGGC AACAACTGTA 361 TGAGACTTCA GTACCTTTAT CATCTATATG GGCAACACCA CAAGATTTGA GATCAGGTGG 421 TGGTATAGGA GCAGCAGAGG CTAATGGTGC AAGATTAGCT GCACCATAAA AACCTCCTAA 481 CCCTAAAAGA ACATTTCTCC TATCAACAGC GTCAAGGTTT TTGTCATGCT CGCCAACGTT 541 GCATGAAACC TTGAAACTTT GACAGCGCCT TCCATGGAGG AAAGGTTGAG AGGGTTTTGA 601 TAAGAAAGTA GAGTGGTTGT TGGTGAAGGG AGAAGAGAGG GATTTGTTGG TGGATAATAA 661 AGGAAGAGTA TTAGGAGTAG AA Predicted gene structure (within gDNA segment 15641 to 19239): Exon 1 16251 16929 ( 679 n); cDNA 1 682 ( 682 n); score: 0.887 MATCH C08HBa0336I24.1+ SGN-E334547- 0.887 679 0.996 C PGS_C08HBa0336I24.1+_SGN-E334547- (16251 16929) Alignment (genomic DNA sequence = upper lines): GTAAGGTAAA GCAAAAGTTG GATCATTAAT AAGTGATCCC AAAATTCTTT CGTAAAAGTA 16310 |||||||||| |||||||||| |||||||||| |||||| ||| || || |||| |||||||||| GTAAGGTAAA GCAAAAGTTG GATCATTAAT AAGTGACCCC AATATCCTTT CGTAAAAGTA 60 CAAGTACCAT CTATGAAAGG GAAAGAAAAG CCACGAGAAA TGAACTTGCA ATTCTTTACC 16370 |||||||||| ||||| || | |||||||||| |||||||||| |||||||||| ||||||||| CAAGTACCAT CTATGGAACG GAAAGAAAAG CCACGAGAAA TGAACTTGCA TTTCTTTACC 120 ACCAACTTTG TAAGCACCGT TGCAATAAGC ACAATGAATA TTAGCTTGTT GTTTAAAGCC 16430 ||||| ||| |||||||||| | |||||||| |||||||||| |||||||||| ||||||| || ACCAATTTTA TAAGCACCGT TACAATAAGC ACAATGAATA TTAGCTTGTT GTTTAAACCC 180 AAGAGGGTCA AAGGGGTCTT TATCAAGTTC CCTCATTCGA CTCGTAGCCA ATTGATACTT 16490 |||||||||| || ||||||| |||||||||| |||||||||| || ||||||| |||||||||| AAGAGGGTCA AAAGGGTCTT TATCAAGTTC CCTCATTCGA CTTGTAGCCA ATTGATACTT 240 GGCTACGTAC TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT TAGTCATAGA 16550 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | ||||||| GGCTACGTAC TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT TCGTCATAGG 300 AGGGAACTTG TAGTACGGAA CACTATCGAT ATCATCGGGT ACAGGAGGGC AACAACTGTA 16610 |||||||||| |||||||||| | |||||||| |||||| ||| |||||||||| |||||||||| AGGGAACTTG TAGTACGGAA CGCTATCGAT ATCATCAGGT ACAGGAGGGC AACAACTGTA 360 TATTACATCA ACACC--T-T CTTTTACATG GGCAGTACCA CAAGACTTGA GATCAGGAGG 16667 | || ||| ||| | | | | || ||| |||| |||| ||||| |||| ||||||| || TGAGACTTCA GTACCTTTAT CATCTATATG GGCAACACCA CAAGATTTGA GATCAGGTGG 420 TGGTATAGGT GCAGCAGTCG CTAATGGTGC AAGATTAGCT GCACCATAAA GACCTCCTAA 16727 ||||||||| ||||||| | |||||||||| |||||||||| |||||||||| ||||||||| TGGTATAGGA GCAGCAGAGG CTAATGGTGC AAGATTAGCT GCACCATAAA AACCTCCTAA 480 CCCTAAAAGA ACGTTTCGTC TATCAACAGC GTCAGGGTTT TTGTCAACGT TGTTTGCGTT 16787 |||||||||| || |||| | |||||||||| |||| ||||| |||||| | | |||| CCCTAAAAGA ACATTTCTCC TATCAACAGC GTCAAGGTTT TTGTCATGCT CGCCAACGTT 540 GCATGAAACC TTGAAACTTT GATTACGCCT TCCGTGGAGG AAAAGTTGAG AGGGTTTTGA 16847 |||||||||| |||||||||| || ||||| ||| |||||| ||| |||||| |||||||||| GCATGAAACC TTGAAACTTT GACAGCGCCT TCCATGGAGG AAAGGTTGAG AGGGTTTTGA 600 TAACAAGGAT GAGTTGGTGG TGGTGAAGGA AGAAGAGAGG GATTTGTTGG TGCATAAAGG 16907 ||| || | |||| | || ||||||||| |||||||||| |||||||||| || |||| TAAGAAAGTA GAGTGGTTGT TGGTGAAGGG AGAAGAGAGG GATTTGTTGG TGGATAATAA 660 AAGAGTAGTA GTAATAGAAG AA 16929 | || |||| || || || || AGGAAGAGTA TTAGGAGTAG AA 682 hqPGS_C08HBa0336I24.1+_SGN-E334547- (16251 16929) ******************************************************************************** EST sequence 226 -strand 675 n (File: SGN-E314873-) 1 AGTAAAGCAA AAGTGGATCA TTATAAGTGC CCCAATATCC TTTGTAAAAG TACAAGTACC 61 ATCTATGGAA CGAAAGAAAA GCCACGAGAA ATGAACTTGC AATTCTTTAC CACCAATTTT 121 ATAAGCACCG TTACAATAAG CACAATGAAT ATTAGCTTGT TGTTTAAACC CAAGAGGGTC 181 AAAAGGGTCT TTATCAAGTT CCCTCATTCG ACTTGTAGCC AATTGATACT TGGCTACGTA 241 CTCCTCATCC GCCGCATGAG CAGGGGGGCG GATGCGGAGT TTCGTCATAG GAGGGAACTT 301 GTAGTACGGA ACGCTATCGA TATCATCAGG TACAGGAGGG CAACAACTGT ATGAGACTTC 361 AGTACCTTTA TCATCTATAT GGGCAACACC ACAAGATTTG AGATCAGGTG GTGGTATAGG 421 AGCAGCAGAG GCTAATGGTG CAAGATTAGC TGCACCATAA AAACCTCCTA ACCCTAAAAG 481 AACATTTCTC CTATCAACAG CGTCAAGGTT TTTGTCATGC TCGCCAACGT TGCATGAAAC 541 CTTGAAACTT TGACAGCGCC TTCCATGGAG GAAAGGTTGA GAGGGTTTTG ATAAGAAAGT 601 AGAGTGGTTG TTGGTGAAGG GAGAAGAGAG GGATTTGTTG GTGGATAATA AAGGAAGAGT 661 ATTAGGAGTA GAAGA Predicted gene structure (within gDNA segment 15011 to 19259): Exon 1 16256 16931 ( 676 n); cDNA 2 675 ( 674 n); score: 0.881 MATCH C08HBa0336I24.1+ SGN-E314873- 0.881 676 1.001 C PGS_C08HBa0336I24.1+_SGN-E314873- (16256 16931) Alignment (genomic DNA sequence = upper lines): GTAAAGCAAA AGTTGGATCA TTAATAAGTG ATCCCAAAAT TCTTTCGTAA AAGTACAAGT 16315 |||||||||| ||| |||||| || ||||||| ||||| || |||| |||| |||||||||| GTAAAGCAAA AGT-GGATCA TT-ATAAGTG -CCCCAATAT CCTTT-GTAA AAGTACAAGT 57 ACCATCTATG AAAGGGAAAG AAAAGCCACG AGAAATGAAC TTGCAATTCT TTACCACCAA 16375 |||||||||| || ||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCATCTATG GAA-CGAAAG AAAAGCCACG AGAAATGAAC TTGCAATTCT TTACCACCAA 116 CTTTGTAAGC ACCGTTGCAA TAAGCACAAT GAATATTAGC TTGTTGTTTA AAGCCAAGAG 16435 ||| ||||| |||||| ||| |||||||||| |||||||||| |||||||||| || ||||||| TTTTATAAGC ACCGTTACAA TAAGCACAAT GAATATTAGC TTGTTGTTTA AACCCAAGAG 176 GGTCAAAGGG GTCTTTATCA AGTTCCCTCA TTCGACTCGT AGCCAATTGA TACTTGGCTA 16495 ||||||| || |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| GGTCAAAAGG GTCTTTATCA AGTTCCCTCA TTCGACTTGT AGCCAATTGA TACTTGGCTA 236 CGTACTCCTC ATCCGCCGCA TGAGCAGGGG GGCGGATGCG GAGTTTAGTC ATAGAAGGGA 16555 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||| ||||| CGTACTCCTC ATCCGCCGCA TGAGCAGGGG GGCGGATGCG GAGTTTCGTC ATAGGAGGGA 296 ACTTGTAGTA CGGAACACTA TCGATATCAT CGGGTACAGG AGGGCAACAA CTGTATATTA 16615 |||||||||| |||||| ||| |||||||||| | |||||||| |||||||||| |||||| | ACTTGTAGTA CGGAACGCTA TCGATATCAT CAGGTACAGG AGGGCAACAA CTGTATGAGA 356 CATCAACACC --T-TCTTTT ACATGGGCAG TACCACAAGA CTTGAGATCA GGAGGTGGTA 16672 | ||| ||| | || | | | ||||||| ||||||||| ||||||||| || ||||||| CTTCAGTACC TTTATCATCT ATATGGGCAA CACCACAAGA TTTGAGATCA GGTGGTGGTA 416 TAGGTGCAGC AGTCGCTAAT GGTGCAAGAT TAGCTGCACC ATAAAGACCT CCTAACCCTA 16732 |||| ||||| || |||||| |||||||||| |||||||||| ||||| |||| |||||||||| TAGGAGCAGC AGAGGCTAAT GGTGCAAGAT TAGCTGCACC ATAAAAACCT CCTAACCCTA 476 AAAGAACGTT TCGTCTATCA ACAGCGTCAG GGTTTTTGTC AACGTTGTTT GCGTTGCATG 16792 ||||||| || || |||||| ||||||||| |||||||||| | | | ||||||||| AAAGAACATT TCTCCTATCA ACAGCGTCAA GGTTTTTGTC ATGCTCGCCA ACGTTGCATG 536 AAACCTTGAA ACTTTGATTA CGCCTTCCGT GGAGGAAAAG TTGAGAGGGT TTTGATAACA 16852 |||||||||| ||||||| |||||||| | |||||||| | |||||||||| |||||||| | AAACCTTGAA ACTTTGACAG CGCCTTCCAT GGAGGAAAGG TTGAGAGGGT TTTGATAAGA 596 AGGATGAGTT GGTGGTGGTG AAGGAAGAAG AGAGGGATTT GTTGGTGCAT AAAGGAAGAG 16912 | | |||| | || ||||| |||| ||||| |||||||||| ||||||| || || | || AAGTAGAGTG GTTGTTGGTG AAGGGAGAAG AGAGGGATTT GTTGGTGGAT AATAAAGGAA 656 TAGTAGTAAT AGAAGAAGA 16931 |||| || || |||||| GAGTATTAGG AGTAGAAGA 675 hqPGS_C08HBa0336I24.1+_SGN-E314873- (16256 16931) ******************************************************************************** EST sequence 123 -strand 680 n (File: SGN-E326499-) 1 AAAGCAAAAG TTGGATCATT AATAAGTGAC CCCAATATCC TTTCGTAAAA GTACAAGTAC 61 CATCTATGAA ACGGAAAGAA AAGCCACGAG AAATGAACTT GCAATTCTTT ACCACCAATT 121 TTATAAGCAC CGTTACAATA AGCACAATGA ATATTAGCTT GTTGTTTAAA CCCAAGAGGG 181 TCAAAAGGGT CTTTATCAAG TTCCCTCATT CGACTTGTAG CCAATTGATA CTTGGCTACG 241 TACTCCTCAT CCGCCGCATG AGCAGGGGGG CGGATGCGGA GTTTCGTCAT AGGAGGGAAC 301 TTGTAGTACG GAACGCTATC GATATCATCA GGTACAGGAG GGCAACAACT GTATGAGACT 361 TCAGTACCTT TATCATCTAT ATGGGCAACA CCACAAGATT TGAGATCAGG TGGTGGTATA 421 GGAGCAGCAG AGGCTAATGG TGCAAGATTA GCTGCACCAT AAAAACCTCC TAACCCTAAA 481 AGAACATTTC TCCTATCAAC AGCGTCAAGG TTTTTGTCAT GCTCGCCAAC GTTGCATGAA 541 ACCTTGAAAC TTTGACAGCG CCTTCCATGG AGGAAAGGTT GAGAGGGTTT TGATAAGAAA 601 GTAGAGTGGT TGTTGGTGAA GGGAGAAGAG AGGGATTTGT TGGTGGATAA TAAAGGAAGA 661 GTATTAGGAG TAGAAGAAGA Predicted gene structure (within gDNA segment 15648 to 19289): Exon 1 16258 16934 ( 677 n); cDNA 1 680 ( 680 n); score: 0.890 MATCH C08HBa0336I24.1+ SGN-E326499- 0.890 677 0.996 C PGS_C08HBa0336I24.1+_SGN-E326499- (16258 16934) Alignment (genomic DNA sequence = upper lines): AAAGCAAAAG TTGGATCATT AATAAGTGAT CCCAAAATTC TTTCGTAAAA GTACAAGTAC 16317 |||||||||| |||||||||| ||||||||| ||||| || | |||||||||| |||||||||| AAAGCAAAAG TTGGATCATT AATAAGTGAC CCCAATATCC TTTCGTAAAA GTACAAGTAC 60 CATCTATGAA AGGGAAAGAA AAGCCACGAG AAATGAACTT GCAATTCTTT ACCACCAACT 16377 |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| |||||||| | CATCTATGAA ACGGAAAGAA AAGCCACGAG AAATGAACTT GCAATTCTTT ACCACCAATT 120 TTGTAAGCAC CGTTGCAATA AGCACAATGA ATATTAGCTT GTTGTTTAAA GCCAAGAGGG 16437 || ||||||| |||| ||||| |||||||||| |||||||||| |||||||||| ||||||||| TTATAAGCAC CGTTACAATA AGCACAATGA ATATTAGCTT GTTGTTTAAA CCCAAGAGGG 180 TCAAAGGGGT CTTTATCAAG TTCCCTCATT CGACTCGTAG CCAATTGATA CTTGGCTACG 16497 ||||| |||| |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| TCAAAAGGGT CTTTATCAAG TTCCCTCATT CGACTTGTAG CCAATTGATA CTTGGCTACG 240 TACTCCTCAT CCGCCGCATG AGCAGGGGGG CGGATGCGGA GTTTAGTCAT AGAAGGGAAC 16557 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| || ||||||| TACTCCTCAT CCGCCGCATG AGCAGGGGGG CGGATGCGGA GTTTCGTCAT AGGAGGGAAC 300 TTGTAGTACG GAACACTATC GATATCATCG GGTACAGGAG GGCAACAACT GTATATTACA 16617 |||||||||| |||| ||||| ||||||||| |||||||||| |||||||||| |||| || TTGTAGTACG GAACGCTATC GATATCATCA GGTACAGGAG GGCAACAACT GTATGAGACT 360 TCAACACC-- T-TCTTTTAC ATGGGCAGTA CCACAAGACT TGAGATCAGG AGGTGGTATA 16674 ||| ||| | || | || ||||||| | |||||||| | |||||||||| ||||||||| TCAGTACCTT TATCATCTAT ATGGGCAACA CCACAAGATT TGAGATCAGG TGGTGGTATA 420 GGTGCAGCAG TCGCTAATGG TGCAAGATTA GCTGCACCAT AAAGACCTCC TAACCCTAAA 16734 || ||||||| |||||||| |||||||||| |||||||||| ||| |||||| |||||||||| GGAGCAGCAG AGGCTAATGG TGCAAGATTA GCTGCACCAT AAAAACCTCC TAACCCTAAA 480 AGAACGTTTC GTCTATCAAC AGCGTCAGGG TTTTTGTCAA CGTTGTTTGC GTTGCATGAA 16794 ||||| |||| |||||||| ||||||| || ||||||||| | | | |||||||||| AGAACATTTC TCCTATCAAC AGCGTCAAGG TTTTTGTCAT GCTCGCCAAC GTTGCATGAA 540 ACCTTGAAAC TTTGATTACG CCTTCCGTGG AGGAAAAGTT GAGAGGGTTT TGATAACAAG 16854 |||||||||| ||||| || |||||| ||| |||||| ||| |||||||||| |||||| || ACCTTGAAAC TTTGACAGCG CCTTCCATGG AGGAAAGGTT GAGAGGGTTT TGATAAGAAA 600 GATGAGTTGG TGGTGGTGAA GGAAGAAGAG AGGGATTTGT TGGTGCATAA AGGAAGAGTA 16914 | |||| | || ||||||| || ||||||| |||||||||| ||||| |||| | || | GTAGAGTGGT TGTTGGTGAA GGGAGAAGAG AGGGATTTGT TGGTGGATAA TAAAGGAAGA 660 GTAGTAATAG AAGAAGAAGA 16934 ||| || || ||||||||| GTATTAGGAG TAGAAGAAGA 680 hqPGS_C08HBa0336I24.1+_SGN-E326499- (16258 16934) ******************************************************************************** EST sequence 136 -strand 677 n (File: SGN-E316082-) 1 AGCAAAGTTG GGATCATTAA TAAGTGACCC CAATATCCTT TCGTAAAAGT ACAAGTACCA 61 TCTATGGAAC GGAAAGAAAA GCCACGAGAA ATGAACTTGC AATTCTTTAC CACCAATTTT 121 ATAAGCACCG TTACAATAAG CACAATGAAT ATTAGCTTGT TGTTTAAACC CAAGAGGGTC 181 AAAAGGGTCT TTATCAAGTT CCCTCATTCG ACTTGTAGCC AATTGATACT TGGCTACGTA 241 CTCCTCATCC GCCGCATGAG CAGGGGGGCG GATGCGGAGT TTCGTCATAG GAGGGAACTT 301 GTAGTACGGA ACGCTATCGA TATCATCAGG TACAGGAGGG CAACAACTGT ATGAGACTTC 361 AGTACCTTTA TCATCTATAT GGGCAACACC ACAAGATTTG AGATCAGGTG GTGGTATAGG 421 AGCAGCAGAG GCTAATGGTG CAAGATTAGC TGCACCATAA AAACCTCCTA ACCCTAAAAG 481 AACATTTCTC CTATCAACAG CGTCAAGGTT TTTGTCATGC TCGCCAACGT TGCATGAAAC 541 CTTGAAACTT TGACAGCGCC TTCCATGGAG GAAAGGTTGA GAGGGTTTTG ATAAGAAAGT 601 AGAGTGGTTG TTGGTGAAGG GAGAAGAGAG GGATTTGTTG GTGGATAATA AAGGAAGAGT 661 ATTAGGAGTA GAAGAAG Predicted gene structure (within gDNA segment 15560 to 19279): Exon 1 16260 16933 ( 674 n); cDNA 1 677 ( 677 n); score: 0.884 MATCH C08HBa0336I24.1+ SGN-E316082- 0.884 674 0.996 C PGS_C08HBa0336I24.1+_SGN-E316082- (16260 16933) Alignment (genomic DNA sequence = upper lines): AGCAAAAGTT GGATCATTAA TAAGTGATCC CAAAATTCTT TCGTAAAAGT ACAAGTACCA 16319 |||||| | |||||||||| ||||||| || ||| || ||| |||||||||| |||||||||| AGCAAAGTTG GGATCATTAA TAAGTGACCC CAATATCCTT TCGTAAAAGT ACAAGTACCA 60 TCTATGAAAG GGAAAGAAAA GCCACGAGAA ATGAACTTGC AATTCTTTAC CACCAACTTT 16379 |||||| || |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| TCTATGGAAC GGAAAGAAAA GCCACGAGAA ATGAACTTGC AATTCTTTAC CACCAATTTT 120 GTAAGCACCG TTGCAATAAG CACAATGAAT ATTAGCTTGT TGTTTAAAGC CAAGAGGGTC 16439 ||||||||| || ||||||| |||||||||| |||||||||| |||||||| | |||||||||| ATAAGCACCG TTACAATAAG CACAATGAAT ATTAGCTTGT TGTTTAAACC CAAGAGGGTC 180 AAAGGGGTCT TTATCAAGTT CCCTCATTCG ACTCGTAGCC AATTGATACT TGGCTACGTA 16499 ||| |||||| |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| AAAAGGGTCT TTATCAAGTT CCCTCATTCG ACTTGTAGCC AATTGATACT TGGCTACGTA 240 CTCCTCATCC GCCGCATGAG CAGGGGGGCG GATGCGGAGT TTAGTCATAG AAGGGAACTT 16559 |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| ||||||||| CTCCTCATCC GCCGCATGAG CAGGGGGGCG GATGCGGAGT TTCGTCATAG GAGGGAACTT 300 GTAGTACGGA ACACTATCGA TATCATCGGG TACAGGAGGG CAACAACTGT ATATTACATC 16619 |||||||||| || ||||||| ||||||| || |||||||||| |||||||||| || || || GTAGTACGGA ACGCTATCGA TATCATCAGG TACAGGAGGG CAACAACTGT ATGAGACTTC 360 AACACC--T- TCTTTTACAT GGGCAGTACC ACAAGACTTG AGATCAGGAG GTGGTATAGG 16676 | ||| | || | || || ||||| ||| |||||| ||| |||||||| | |||||||||| AGTACCTTTA TCATCTATAT GGGCAACACC ACAAGATTTG AGATCAGGTG GTGGTATAGG 420 TGCAGCAGTC GCTAATGGTG CAAGATTAGC TGCACCATAA AGACCTCCTA ACCCTAAAAG 16736 ||||||| |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| AGCAGCAGAG GCTAATGGTG CAAGATTAGC TGCACCATAA AAACCTCCTA ACCCTAAAAG 480 AACGTTTCGT CTATCAACAG CGTCAGGGTT TTTGTCAACG TTGTTTGCGT TGCATGAAAC 16796 ||| |||| |||||||||| ||||| |||| ||||||| | | ||| |||||||||| AACATTTCTC CTATCAACAG CGTCAAGGTT TTTGTCATGC TCGCCAACGT TGCATGAAAC 540 CTTGAAACTT TGATTACGCC TTCCGTGGAG GAAAAGTTGA GAGGGTTTTG ATAACAAGGA 16856 |||||||||| ||| |||| |||| ||||| |||| ||||| |||||||||| |||| || | CTTGAAACTT TGACAGCGCC TTCCATGGAG GAAAGGTTGA GAGGGTTTTG ATAAGAAAGT 600 TGAGTTGGTG GTGGTGAAGG AAGAAGAGAG GGATTTGTTG GTGCATAAAG GAAGAGTAGT 16916 |||| | || ||||||||| ||||||||| |||||||||| ||| |||| | || ||| AGAGTGGTTG TTGGTGAAGG GAGAAGAGAG GGATTTGTTG GTGGATAATA AAGGAAGAGT 660 AGTAATAGAA GAAGAAG 16933 | || || | ||||||| ATTAGGAGTA GAAGAAG 677 hqPGS_C08HBa0336I24.1+_SGN-E316082- (16260 16933) ******************************************************************************** EST sequence 199 -strand 686 n (File: SGN-E328506-) 1 GCAAAAGTTG GATCATTATA AAGTGATCCC AAAATTCTTT CGTAAAAGTA CAAGTACCAT 61 CTATGAAAGG GAAAGAAAAG CCACGAGAAA TGAACTTGCA ATTCTTTACC ACCAACTTTG 121 TAAGCACCGT TGCAATAAGC ACAATGAATA TTAGCTTGTT GTTTAAAGCC AAGAGGGTCA 181 AAGGGGTCTT TATCAAGTTC CCTCATTCGA CTCGTAGCCA ATTGATACTT GGCTACGTAC 241 TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT TAGTCATAGA AGGGAACTTG 301 TAGTACGGAA CACTATCGAT ATCATCGGGT ACAGGAGGGC AACAACTGTA TATTACATCA 361 ACACCTTCTT TTACATGGGC AGTACCACAA GACTTGAGAT CAGGAGGTGG TATAGGTGCA 421 GCAGTCGCTA ATGGTGCAAG ATTAGCTGCA CCATAAAGAC CTCCTAACCC TAAAAGAACG 481 TTTCGTCTAT CAACAGCGTC AGGGTTTTTG TCAACGTTGT TTGCGTTGCA TGAAACCTTG 541 AAACTTTGAT TACGCCTTCC GTGGAGGAAA AGTTGAGAGG GTTTTGATAA CAAGGATGAG 601 TTGGTGGTGG TGAAGGAAGA AGAGAGGGAT TTGTTGGTGC ATAAAGGAAG AGTAGTAGTA 661 ATAGAAGAAG AAGAAGACAT TGTGTT Predicted gene structure (within gDNA segment 15651 to 17546): Exon 1 16261 16946 ( 686 n); cDNA 1 686 ( 686 n); score: 0.997 MATCH C08HBa0336I24.1+ SGN-E328506- 0.997 686 1.000 C PGS_C08HBa0336I24.1+_SGN-E328506- (16261 16946) Alignment (genomic DNA sequence = upper lines): GCAAAAGTTG GATCATTAAT AAGTGATCCC AAAATTCTTT CGTAAAAGTA CAAGTACCAT 16320 |||||||||| |||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAAAAGTTG GATCATTATA AAGTGATCCC AAAATTCTTT CGTAAAAGTA CAAGTACCAT 60 CTATGAAAGG GAAAGAAAAG CCACGAGAAA TGAACTTGCA ATTCTTTACC ACCAACTTTG 16380 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTATGAAAGG GAAAGAAAAG CCACGAGAAA TGAACTTGCA ATTCTTTACC ACCAACTTTG 120 TAAGCACCGT TGCAATAAGC ACAATGAATA TTAGCTTGTT GTTTAAAGCC AAGAGGGTCA 16440 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGCACCGT TGCAATAAGC ACAATGAATA TTAGCTTGTT GTTTAAAGCC AAGAGGGTCA 180 AAGGGGTCTT TATCAAGTTC CCTCATTCGA CTCGTAGCCA ATTGATACTT GGCTACGTAC 16500 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGGGTCTT TATCAAGTTC CCTCATTCGA CTCGTAGCCA ATTGATACTT GGCTACGTAC 240 TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT TAGTCATAGA AGGGAACTTG 16560 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT TAGTCATAGA AGGGAACTTG 300 TAGTACGGAA CACTATCGAT ATCATCGGGT ACAGGAGGGC AACAACTGTA TATTACATCA 16620 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGTACGGAA CACTATCGAT ATCATCGGGT ACAGGAGGGC AACAACTGTA TATTACATCA 360 ACACCTTCTT TTACATGGGC AGTACCACAA GACTTGAGAT CAGGAGGTGG TATAGGTGCA 16680 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACACCTTCTT TTACATGGGC AGTACCACAA GACTTGAGAT CAGGAGGTGG TATAGGTGCA 420 GCAGTCGCTA ATGGTGCAAG ATTAGCTGCA CCATAAAGAC CTCCTAACCC TAAAAGAACG 16740 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGTCGCTA ATGGTGCAAG ATTAGCTGCA CCATAAAGAC CTCCTAACCC TAAAAGAACG 480 TTTCGTCTAT CAACAGCGTC AGGGTTTTTG TCAACGTTGT TTGCGTTGCA TGAAACCTTG 16800 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCGTCTAT CAACAGCGTC AGGGTTTTTG TCAACGTTGT TTGCGTTGCA TGAAACCTTG 540 AAACTTTGAT TACGCCTTCC GTGGAGGAAA AGTTGAGAGG GTTTTGATAA CAAGGATGAG 16860 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACTTTGAT TACGCCTTCC GTGGAGGAAA AGTTGAGAGG GTTTTGATAA CAAGGATGAG 600 TTGGTGGTGG TGAAGGAAGA AGAGAGGGAT TTGTTGGTGC ATAAAGGAAG AGTAGTAGTA 16920 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGTGGTGG TGAAGGAAGA AGAGAGGGAT TTGTTGGTGC ATAAAGGAAG AGTAGTAGTA 660 ATAGAAGAAG AAGAAGACAT TGTGTT 16946 |||||||||| |||||||||| |||||| ATAGAAGAAG AAGAAGACAT TGTGTT 686 hqPGS_C08HBa0336I24.1+_SGN-E328506- (16261 16946) ******************************************************************************** EST sequence 64 -strand 664 n (File: SGN-E313146-) 1 TCATTAATAA GTGACCCCAA TATCCTTTCG TAAAAGTACA AGTACCATCT ATGGAACGGA 61 AAGAAAAGCC ACGAGAAATG AACTTGCAAT TCTTTACCAC CAATTTTATA AGCACCGTTA 121 CAATAAGCAC AATGAATATT AGCTTGTTGT TTAAACCCAA GAGGGTCAAA AGGGTCTTTA 181 TCAAGTTCCC TCATTCGACT TGTAGCCAAT TGATACTTGG CTACGTACTC CTCATCCGCC 241 GCATGAGCAG GGGGGCGGAT GCGGAGTTTC GTCATAGGAG GGAACTTGTA GTACGGAACG 301 CTATCGATAT CATCAGGTAC AGGAGGGCAA CAACTGTATG AGACTTCAGT ACCTTTATCA 361 TCTATATGGG CAACACCACA AGATTTGAGA TCAGGTGGTG GTATAGGAGC AGCAGAGGCT 421 AATGGTGCAA GATTAGCTGC ACCATAAAAA CCTCCTAACC CTAAAAGAAC ATTTCTCCTA 481 TCAACAGCGT CAAGGTTTTT GTCATGCTCG CCAACGTTGC ATGAAACCTT GAAACTTTGA 541 CAGCGCCTTC CATGGAGGAA AGGTTGAGAG GGTTTTGATA AGAAAGTAGA GTGGTTGTTG 601 GTGAAGGGAG AAGAGAGGGC TTCGCTGGTG GATAATAAAG GAAGAGTATT AGGAGTAGAA 661 GAAG Predicted gene structure (within gDNA segment 15150 to 19279): Exon 1 16273 16933 ( 661 n); cDNA 1 664 ( 664 n); score: 0.881 MATCH C08HBa0336I24.1+ SGN-E313146- 0.881 661 0.995 C PGS_C08HBa0336I24.1+_SGN-E313146- (16273 16933) Alignment (genomic DNA sequence = upper lines): TCATTAATAA GTGATCCCAA AATTCTTTCG TAAAAGTACA AGTACCATCT ATGAAAGGGA 16332 |||||||||| |||| ||||| || |||||| |||||||||| |||||||||| ||| || ||| TCATTAATAA GTGACCCCAA TATCCTTTCG TAAAAGTACA AGTACCATCT ATGGAACGGA 60 AAGAAAAGCC ACGAGAAATG AACTTGCAAT TCTTTACCAC CAACTTTGTA AGCACCGTTG 16392 |||||||||| |||||||||| |||||||||| |||||||||| ||| ||| || ||||||||| AAGAAAAGCC ACGAGAAATG AACTTGCAAT TCTTTACCAC CAATTTTATA AGCACCGTTA 120 CAATAAGCAC AATGAATATT AGCTTGTTGT TTAAAGCCAA GAGGGTCAAA GGGGTCTTTA 16452 |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| ||||||||| CAATAAGCAC AATGAATATT AGCTTGTTGT TTAAACCCAA GAGGGTCAAA AGGGTCTTTA 180 TCAAGTTCCC TCATTCGACT CGTAGCCAAT TGATACTTGG CTACGTACTC CTCATCCGCC 16512 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| TCAAGTTCCC TCATTCGACT TGTAGCCAAT TGATACTTGG CTACGTACTC CTCATCCGCC 240 GCATGAGCAG GGGGGCGGAT GCGGAGTTTA GTCATAGAAG GGAACTTGTA GTACGGAACA 16572 |||||||||| |||||||||| ||||||||| ||||||| || |||||||||| ||||||||| GCATGAGCAG GGGGGCGGAT GCGGAGTTTC GTCATAGGAG GGAACTTGTA GTACGGAACG 300 CTATCGATAT CATCGGGTAC AGGAGGGCAA CAACTGTATA TTACATCAAC ACC-TT--CT 16629 |||||||||| |||| ||||| |||||||||| ||||||||| || ||| ||| || | CTATCGATAT CATCAGGTAC AGGAGGGCAA CAACTGTATG AGACTTCAGT ACCTTTATCA 360 TTTACATGGG CAGTACCACA AGACTTGAGA TCAGGAGGTG GTATAGGTGC AGCAGTCGCT 16689 | || ||||| || |||||| ||| |||||| ||||| |||| ||||||| || ||||| ||| TCTATATGGG CAACACCACA AGATTTGAGA TCAGGTGGTG GTATAGGAGC AGCAGAGGCT 420 AATGGTGCAA GATTAGCTGC ACCATAAAGA CCTCCTAACC CTAAAAGAAC GTTTCGTCTA 16749 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| |||| ||| AATGGTGCAA GATTAGCTGC ACCATAAAAA CCTCCTAACC CTAAAAGAAC ATTTCTCCTA 480 TCAACAGCGT CAGGGTTTTT GTCAACGTTG TTTGCGTTGC ATGAAACCTT GAAACTTTGA 16809 |||||||||| || ||||||| |||| | | |||||| |||||||||| |||||||||| TCAACAGCGT CAAGGTTTTT GTCATGCTCG CCAACGTTGC ATGAAACCTT GAAACTTTGA 540 TTACGCCTTC CGTGGAGGAA AAGTTGAGAG GGTTTTGATA ACAAGGATGA GTTGGTGGTG 16869 ||||||| | |||||||| | |||||||| |||||||||| | || | || || | || || CAGCGCCTTC CATGGAGGAA AGGTTGAGAG GGTTTTGATA AGAAAGTAGA GTGGTTGTTG 600 GTGAAGGAAG AAGAGAGGGA TTTGTTGGTG CATAAAGGAA GAGTAGTAGT AATAGAAGAA 16929 ||||||| || ||||||||| || | ||||| |||| | || |||| | | || |||| GTGAAGGGAG AAGAGAGGGC TTCGCTGGTG GATAATAAAG GAAGAGTATT AGGAGTAGAA 660 GAAG 16933 |||| GAAG 664 hqPGS_C08HBa0336I24.1+_SGN-E313146- (16273 16933) ******************************************************************************** EST sequence 255 -strand 637 n (File: SGN-E312861-) 1 CGTAAAAGTA CAAGTACCAT CTATGGAACG GAAAGAAAAG CCACGAGAAA TGAACTTGCA 61 ATTCTTTACC ACCAATTTTA TAAGCACCGT TACAATAAGC ACAATGAATA TTAGCTTGTT 121 GTTTAAACCC AAGAGGGTCA AAAGGGTCTT TATCAAGTTC CCTCATTCGA CTTGTAGCCA 181 ATTGATACTT GGCTACGTAC TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT 241 TCGTCATAGG AGGGAACTTG TAGTACGGAA CGCTATCGAT ATCATCAGGT ACAGGAGGGC 301 AACAACTGTA TGAGACTTCA GTACCTTTAT CATCTATATG GGCAACACCA CAAGATTTGA 361 GATCAGGTGG TGGTATAGGA GCAGCAGAGG CTAATGGTGC AAGATTAGCT GCACCATAAA 421 AACCTCCTAA CCCTAAAAGA ACATTTCTCC TATCAACAGC GTCAAGGTTT TTGTCATGCT 481 CGCCAACGTT GCATGAAACC TTGAAACTTT GACAGCGCCT TCCATGGAGG AAAGGTTGAG 541 AGGGTTTTGA TAAGAAAGTA GAGTGGTTGT TGGTGAAGGG AGAAGAGAGG GATTTGTTGG 601 TGGATAATAA AGGAAGAGTA TTAGGAGTAG AAGAAGA Predicted gene structure (within gDNA segment 15430 to 19289): Exon 1 16301 16934 ( 634 n); cDNA 1 637 ( 637 n); score: 0.886 MATCH C08HBa0336I24.1+ SGN-E312861- 0.886 634 0.995 C PGS_C08HBa0336I24.1+_SGN-E312861- (16301 16934) Alignment (genomic DNA sequence = upper lines): CGTAAAAGTA CAAGTACCAT CTATGAAAGG GAAAGAAAAG CCACGAGAAA TGAACTTGCA 16360 |||||||||| |||||||||| ||||| || | |||||||||| |||||||||| |||||||||| CGTAAAAGTA CAAGTACCAT CTATGGAACG GAAAGAAAAG CCACGAGAAA TGAACTTGCA 60 ATTCTTTACC ACCAACTTTG TAAGCACCGT TGCAATAAGC ACAATGAATA TTAGCTTGTT 16420 |||||||||| ||||| ||| |||||||||| | |||||||| |||||||||| |||||||||| ATTCTTTACC ACCAATTTTA TAAGCACCGT TACAATAAGC ACAATGAATA TTAGCTTGTT 120 GTTTAAAGCC AAGAGGGTCA AAGGGGTCTT TATCAAGTTC CCTCATTCGA CTCGTAGCCA 16480 ||||||| || |||||||||| || ||||||| |||||||||| |||||||||| || ||||||| GTTTAAACCC AAGAGGGTCA AAAGGGTCTT TATCAAGTTC CCTCATTCGA CTTGTAGCCA 180 ATTGATACTT GGCTACGTAC TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT 16540 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGATACTT GGCTACGTAC TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT 240 TAGTCATAGA AGGGAACTTG TAGTACGGAA CACTATCGAT ATCATCGGGT ACAGGAGGGC 16600 | ||||||| |||||||||| |||||||||| | |||||||| |||||| ||| |||||||||| TCGTCATAGG AGGGAACTTG TAGTACGGAA CGCTATCGAT ATCATCAGGT ACAGGAGGGC 300 AACAACTGTA TATTACATCA ACACC--T-T CTTTTACATG GGCAGTACCA CAAGACTTGA 16657 |||||||||| | || ||| ||| | | | | || ||| |||| |||| ||||| |||| AACAACTGTA TGAGACTTCA GTACCTTTAT CATCTATATG GGCAACACCA CAAGATTTGA 360 GATCAGGAGG TGGTATAGGT GCAGCAGTCG CTAATGGTGC AAGATTAGCT GCACCATAAA 16717 ||||||| || ||||||||| ||||||| | |||||||||| |||||||||| |||||||||| GATCAGGTGG TGGTATAGGA GCAGCAGAGG CTAATGGTGC AAGATTAGCT GCACCATAAA 420 GACCTCCTAA CCCTAAAAGA ACGTTTCGTC TATCAACAGC GTCAGGGTTT TTGTCAACGT 16777 ||||||||| |||||||||| || |||| | |||||||||| |||| ||||| |||||| | AACCTCCTAA CCCTAAAAGA ACATTTCTCC TATCAACAGC GTCAAGGTTT TTGTCATGCT 480 TGTTTGCGTT GCATGAAACC TTGAAACTTT GATTACGCCT TCCGTGGAGG AAAAGTTGAG 16837 | |||| |||||||||| |||||||||| || ||||| ||| |||||| ||| |||||| CGCCAACGTT GCATGAAACC TTGAAACTTT GACAGCGCCT TCCATGGAGG AAAGGTTGAG 540 AGGGTTTTGA TAACAAGGAT GAGTTGGTGG TGGTGAAGGA AGAAGAGAGG GATTTGTTGG 16897 |||||||||| ||| || | |||| | || ||||||||| |||||||||| |||||||||| AGGGTTTTGA TAAGAAAGTA GAGTGGTTGT TGGTGAAGGG AGAAGAGAGG GATTTGTTGG 600 TGCATAAAGG AAGAGTAGTA GTAATAGAAG AAGAAGA 16934 || |||| | || |||| || || || ||||||| TGGATAATAA AGGAAGAGTA TTAGGAGTAG AAGAAGA 637 hqPGS_C08HBa0336I24.1+_SGN-E312861- (16301 16934) ******************************************************************************** EST sequence 97 -strand 619 n (File: SGN-E325586-) 1 ATGGAACGGA AAGAAAAGCC ACGAGAAATG AACTTGCAAT CTTTACCANC CAATTTTATA 61 AGCACCGTTA CAATAAGCAC AATGAATATT AGCTTGTTGT TTAAACCCAA GAGGGTCAAA 121 AGGGTCTTTA TCAAGTTCCT TCATTCGACT TGTAGCCAAT TGATACTTGG CTACGTACTC 181 CTCATCCGCC GCATGAGCAG GGGGGCGGAT GCGGAGTTTC GTCATAGGAG GGAACTTGTA 241 GTACGGAACG CTATCGATAT CATCAGGTAC AGGAGGGCAA CAACTGTATG AGACTTCAGT 301 ACCTTTATCA TCTATATGGG CAACACCACA AGATTTGAGA TCAGGTGGTG GTATAGGAGC 361 AGCAGAGGCT AATGGTGCAA GATTAGCTGC ACCATAAAAA CCTCCTAACC CTAAAAGAAC 421 ATTTCTCCTA TCAACAGCGT CAAGGTTTTT GTCATGCTCG CCAACGTTGC ATGAAACCTT 481 GAAACTTTGA CAGCGCCTTC CATGGAGGAA AGGTTGAGAG GGTTTTGATA AGAAAGTAGA 541 GTGGTTGTTG GTGAAGGGAG AAGAGAGGGA TTTGTTGGTG GATAATAAAG GAAGAGTATT 601 AGGAGTAGAA GAAGACATT Predicted gene structure (within gDNA segment 15650 to 19329): Exon 1 16323 16941 ( 619 n); cDNA 1 619 ( 619 n); score: 0.877 MATCH C08HBa0336I24.1+ SGN-E325586- 0.877 619 1.000 C PGS_C08HBa0336I24.1+_SGN-E325586- (16323 16941) Alignment (genomic DNA sequence = upper lines): ATGAAAGGGA AAGAAAAGCC ACGAGAAATG AACTTGCAAT TCTTTACCA- CCAACTTTGT 16381 ||| || ||| |||||||||| |||||||||| |||||||||| |||||||| |||| ||| | ATGGAACGGA AAGAAAAGCC ACGAGAAATG AACTTGCAAT -CTTTACCAN CCAATTTTAT 59 AAGCACCGTT GCAATAAGCA CAATGAATAT TAGCTTGTTG TTTAAAGCCA AGAGGGTCAA 16441 |||||||||| ||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| AAGCACCGTT ACAATAAGCA CAATGAATAT TAGCTTGTTG TTTAAACCCA AGAGGGTCAA 119 AGGGGTCTTT ATCAAGTTCC CTCATTCGAC TCGTAGCCAA TTGATACTTG GCTACGTACT 16501 | |||||||| |||||||||| ||||||||| | |||||||| |||||||||| |||||||||| AAGGGTCTTT ATCAAGTTCC TTCATTCGAC TTGTAGCCAA TTGATACTTG GCTACGTACT 179 CCTCATCCGC CGCATGAGCA GGGGGGCGGA TGCGGAGTTT AGTCATAGAA GGGAACTTGT 16561 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| | |||||||||| CCTCATCCGC CGCATGAGCA GGGGGGCGGA TGCGGAGTTT CGTCATAGGA GGGAACTTGT 239 AGTACGGAAC ACTATCGATA TCATCGGGTA CAGGAGGGCA ACAACTGTAT ATTACATCAA 16621 |||||||||| ||||||||| ||||| |||| |||||||||| |||||||||| || ||| AGTACGGAAC GCTATCGATA TCATCAGGTA CAGGAGGGCA ACAACTGTAT GAGACTTCAG 299 CACC--T-TC TTTTACATGG GCAGTACCAC AAGACTTGAG ATCAGGAGGT GGTATAGGTG 16678 ||| | || | || |||| ||| ||||| |||| ||||| |||||| ||| |||||||| | TACCTTTATC ATCTATATGG GCAACACCAC AAGATTTGAG ATCAGGTGGT GGTATAGGAG 359 CAGCAGTCGC TAATGGTGCA AGATTAGCTG CACCATAAAG ACCTCCTAAC CCTAAAAGAA 16738 |||||| || |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| CAGCAGAGGC TAATGGTGCA AGATTAGCTG CACCATAAAA ACCTCCTAAC CCTAAAAGAA 419 CGTTTCGTCT ATCAACAGCG TCAGGGTTTT TGTCAACGTT GTTTGCGTTG CATGAAACCT 16798 | |||| || |||||||||| ||| |||||| ||||| | | ||||| |||||||||| CATTTCTCCT ATCAACAGCG TCAAGGTTTT TGTCATGCTC GCCAACGTTG CATGAAACCT 479 TGAAACTTTG ATTACGCCTT CCGTGGAGGA AAAGTTGAGA GGGTTTTGAT AACAAGGATG 16858 |||||||||| | |||||| || ||||||| || ||||||| |||||||||| || || | | TGAAACTTTG ACAGCGCCTT CCATGGAGGA AAGGTTGAGA GGGTTTTGAT AAGAAAGTAG 539 AGTTGGTGGT GGTGAAGGAA GAAGAGAGGG ATTTGTTGGT GCATAAAGGA AGAGTAGTAG 16918 ||| | || | |||||||| | |||||||||| |||||||||| | || || | || | || || AGTGGTTGTT GGTGAAGGGA GAAGAGAGGG ATTTGTTGGT GGAT-AATAA AG-GAAG-AG 596 TAATAGAAGA AGAAGAAGAC ATT 16941 || ||| || |||||||||| ||| TATTAGGAGT AGAAGAAGAC ATT 619 hqPGS_C08HBa0336I24.1+_SGN-E325586- (16323 16941) ******************************************************************************** EST sequence 102 -strand 608 n (File: SGN-E325657-) 1 CGGAAAGAAA AGCCACGAGA AATGAACTTG CAATTCTTTA CCACCAATTT ATAAGCACCG 61 TTACAATAAG CACAATGAAT ATTAGCTTGT TGTTTAAACC CAAGAGGGTC AAAAGGGTCT 121 TTATCAAGTT CCTTCATTCG ACTTGTAGCC AATTGATACT TGGCTACGTA CTCCTCATCC 181 GCCGCATGAG CAGGGGGGCG GATGCGGAGT TTCGTCATAG GAGGGAACTT GTAGTACGGA 241 ACGCTATCGA TATCATCAGG TACAGGAGGG CAACAACTGT ATGAGACTTC AGTACCTTTA 301 TCATCTATAT GGGCAACACC ACAAGATTTG AGATCAGGTG GTGGTATAGG AGCAGCAGAG 361 GCTAATGGTG CAAGATTAGC TGCACCATAA AAACCTCCTA ACCCTAAAAG AACATTTCTC 421 CTATCAACAG CGTCAAGGTT TTTGTCATGC TCGCCAACGT TGCATGAAAC CTTGAAACTT 481 TGACAGCGCC TTCCATGGAG GAAAGGTTGA GAGGGTTTTG ATAAGAAAGT AGAGTGGTTG 541 TTGGTGAAGG GAGAAGAGAG GGATTTGTTG GTGGATAATA AAGGAAGAGT ATTAGGAGTA 601 GAAGAAGA Predicted gene structure (within gDNA segment 15710 to 19289): Exon 1 16330 16934 ( 605 n); cDNA 2 608 ( 607 n); score: 0.882 MATCH C08HBa0336I24.1+ SGN-E325657- 0.882 605 0.995 C PGS_C08HBa0336I24.1+_SGN-E325657- (16330 16934) Alignment (genomic DNA sequence = upper lines): GGAAAGAAAA GCCACGAGAA ATGAACTTGC AATTCTTTAC CACCAACTTT GTAAGCACCG 16389 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| ||||||||| GGAAAGAAAA GCCACGAGAA ATGAACTTGC AATTCTTTAC CACCAA-TTT ATAAGCACCG 60 TTGCAATAAG CACAATGAAT ATTAGCTTGT TGTTTAAAGC CAAGAGGGTC AAAGGGGTCT 16449 || ||||||| |||||||||| |||||||||| |||||||| | |||||||||| ||| |||||| TTACAATAAG CACAATGAAT ATTAGCTTGT TGTTTAAACC CAAGAGGGTC AAAAGGGTCT 120 TTATCAAGTT CCCTCATTCG ACTCGTAGCC AATTGATACT TGGCTACGTA CTCCTCATCC 16509 |||||||||| || ||||||| ||| |||||| |||||||||| |||||||||| |||||||||| TTATCAAGTT CCTTCATTCG ACTTGTAGCC AATTGATACT TGGCTACGTA CTCCTCATCC 180 GCCGCATGAG CAGGGGGGCG GATGCGGAGT TTAGTCATAG AAGGGAACTT GTAGTACGGA 16569 |||||||||| |||||||||| |||||||||| || ||||||| ||||||||| |||||||||| GCCGCATGAG CAGGGGGGCG GATGCGGAGT TTCGTCATAG GAGGGAACTT GTAGTACGGA 240 ACACTATCGA TATCATCGGG TACAGGAGGG CAACAACTGT ATATTACATC AACACC--T- 16626 || ||||||| ||||||| || |||||||||| |||||||||| || || || | ||| | ACGCTATCGA TATCATCAGG TACAGGAGGG CAACAACTGT ATGAGACTTC AGTACCTTTA 300 TCTTTTACAT GGGCAGTACC ACAAGACTTG AGATCAGGAG GTGGTATAGG TGCAGCAGTC 16686 || | || || ||||| ||| |||||| ||| |||||||| | |||||||||| ||||||| TCATCTATAT GGGCAACACC ACAAGATTTG AGATCAGGTG GTGGTATAGG AGCAGCAGAG 360 GCTAATGGTG CAAGATTAGC TGCACCATAA AGACCTCCTA ACCCTAAAAG AACGTTTCGT 16746 |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| ||| |||| GCTAATGGTG CAAGATTAGC TGCACCATAA AAACCTCCTA ACCCTAAAAG AACATTTCTC 420 CTATCAACAG CGTCAGGGTT TTTGTCAACG TTGTTTGCGT TGCATGAAAC CTTGAAACTT 16806 |||||||||| ||||| |||| ||||||| | | ||| |||||||||| |||||||||| CTATCAACAG CGTCAAGGTT TTTGTCATGC TCGCCAACGT TGCATGAAAC CTTGAAACTT 480 TGATTACGCC TTCCGTGGAG GAAAAGTTGA GAGGGTTTTG ATAACAAGGA TGAGTTGGTG 16866 ||| |||| |||| ||||| |||| ||||| |||||||||| |||| || | |||| | || TGACAGCGCC TTCCATGGAG GAAAGGTTGA GAGGGTTTTG ATAAGAAAGT AGAGTGGTTG 540 GTGGTGAAGG AAGAAGAGAG GGATTTGTTG GTGCATAAAG GAAGAGTAGT AGTAATAGAA 16926 ||||||||| ||||||||| |||||||||| ||| |||| | || ||| | || || | TTGGTGAAGG GAGAAGAGAG GGATTTGTTG GTGGATAATA AAGGAAGAGT ATTAGGAGTA 600 GAAGAAGA 16934 |||||||| GAAGAAGA 608 hqPGS_C08HBa0336I24.1+_SGN-E325657- (16330 16934) ******************************************************************************** EST sequence 191 -strand 606 n (File: SGN-E317269-) 1 GAAAGAAAAG CCACGAGAAA TGAACTTGCA ATTCTTTACC ACCAATTTTA TAAGCACCGT 61 TACAATAAGC ACAATGAATA TTAGCTTGTT GTTTAAACCC AAGAGGGTCA AAAGGGTCTT 121 TATCAAGTTC CCTCATTCGA CTTGTAGCCA ATTGATACTT GGCTACGTAC TCCTCATCCG 181 CCGCATGAGC AGGGGGGCGG ATGCGGAGTT TCGTCATAGG AGGGAACTTG TAGTACGGAA 241 CGCTATCGAT ATCATCAGGT ACAGGAGGGC AACAACTGTA TGAGACTTCA GTACCTTTAT 301 CATCTATATG GGCAACACCA CAAGATTTGA GATCAGGTGG TGGTATAGGA GCAGCAGAGG 361 CTAATGGTGC AAGATTAGCT GCACCATAAA AACCTCCTAA CCCTAAAAGA ACATTTCTCC 421 TATCAACAGC GTCAAGGTTT TTGTCATGCT CGCCAACGTT GCATGAAACC TTGAAACTTT 481 GACAGCGCCT TCCATGGAGG AAAGGTTGAG AGGGTTTTGA TAAGAAAGTA GAGTGGTTGT 541 TGGTGAAGGG AGAAGAGAGG GATTTGTTGG TGGATAATAA AGGAAGAGTA TTAGGAGTAG 601 AAGAAG Predicted gene structure (within gDNA segment 15721 to 19279): Exon 1 16331 16933 ( 603 n); cDNA 1 606 ( 606 n); score: 0.883 MATCH C08HBa0336I24.1+ SGN-E317269- 0.883 603 0.995 C PGS_C08HBa0336I24.1+_SGN-E317269- (16331 16933) Alignment (genomic DNA sequence = upper lines): GAAAGAAAAG CCACGAGAAA TGAACTTGCA ATTCTTTACC ACCAACTTTG TAAGCACCGT 16390 |||||||||| |||||||||| |||||||||| |||||||||| ||||| ||| |||||||||| GAAAGAAAAG CCACGAGAAA TGAACTTGCA ATTCTTTACC ACCAATTTTA TAAGCACCGT 60 TGCAATAAGC ACAATGAATA TTAGCTTGTT GTTTAAAGCC AAGAGGGTCA AAGGGGTCTT 16450 | |||||||| |||||||||| |||||||||| ||||||| || |||||||||| || ||||||| TACAATAAGC ACAATGAATA TTAGCTTGTT GTTTAAACCC AAGAGGGTCA AAAGGGTCTT 120 TATCAAGTTC CCTCATTCGA CTCGTAGCCA ATTGATACTT GGCTACGTAC TCCTCATCCG 16510 |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| TATCAAGTTC CCTCATTCGA CTTGTAGCCA ATTGATACTT GGCTACGTAC TCCTCATCCG 180 CCGCATGAGC AGGGGGGCGG ATGCGGAGTT TAGTCATAGA AGGGAACTTG TAGTACGGAA 16570 |||||||||| |||||||||| |||||||||| | ||||||| |||||||||| |||||||||| CCGCATGAGC AGGGGGGCGG ATGCGGAGTT TCGTCATAGG AGGGAACTTG TAGTACGGAA 240 CACTATCGAT ATCATCGGGT ACAGGAGGGC AACAACTGTA TATTACATCA ACACC--T-T 16627 | |||||||| |||||| ||| |||||||||| |||||||||| | || ||| ||| | | CGCTATCGAT ATCATCAGGT ACAGGAGGGC AACAACTGTA TGAGACTTCA GTACCTTTAT 300 CTTTTACATG GGCAGTACCA CAAGACTTGA GATCAGGAGG TGGTATAGGT GCAGCAGTCG 16687 | | || ||| |||| |||| ||||| |||| ||||||| || ||||||||| ||||||| | CATCTATATG GGCAACACCA CAAGATTTGA GATCAGGTGG TGGTATAGGA GCAGCAGAGG 360 CTAATGGTGC AAGATTAGCT GCACCATAAA GACCTCCTAA CCCTAAAAGA ACGTTTCGTC 16747 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| || |||| | CTAATGGTGC AAGATTAGCT GCACCATAAA AACCTCCTAA CCCTAAAAGA ACATTTCTCC 420 TATCAACAGC GTCAGGGTTT TTGTCAACGT TGTTTGCGTT GCATGAAACC TTGAAACTTT 16807 |||||||||| |||| ||||| |||||| | | |||| |||||||||| |||||||||| TATCAACAGC GTCAAGGTTT TTGTCATGCT CGCCAACGTT GCATGAAACC TTGAAACTTT 480 GATTACGCCT TCCGTGGAGG AAAAGTTGAG AGGGTTTTGA TAACAAGGAT GAGTTGGTGG 16867 || ||||| ||| |||||| ||| |||||| |||||||||| ||| || | |||| | || GACAGCGCCT TCCATGGAGG AAAGGTTGAG AGGGTTTTGA TAAGAAAGTA GAGTGGTTGT 540 TGGTGAAGGA AGAAGAGAGG GATTTGTTGG TGCATAAAGG AAGAGTAGTA GTAATAGAAG 16927 ||||||||| |||||||||| |||||||||| || |||| | || |||| || || || TGGTGAAGGG AGAAGAGAGG GATTTGTTGG TGGATAATAA AGGAAGAGTA TTAGGAGTAG 600 AAGAAG 16933 |||||| AAGAAG 606 hqPGS_C08HBa0336I24.1+_SGN-E317269- (16331 16933) ******************************************************************************** EST sequence 235 -strand 606 n (File: SGN-E312222-) 1 AAAGAAAAGC CACGAGAAAT GAACTTGCAA TTCTTTACCA CCAATTTTAT AAGCACCGTT 61 ACAATAAGCA CAATGAATAT TAGCTTGTTG TTTAAACCCA AGAGGGTCAA AAGGGTCTTT 121 ATCAAGTTCC CTCATTCGAC TTGTAGCCAA TTGATACTTG GCTACGTACT CCTCATCCGC 181 CGCATGAGCA GGGGGGCGGA TGCGGAGTTT CGTCATAGGA GGGAACTTGT AGTACGGAAC 241 GCTATCGATA TCATCAGGTA CAGGAGGGCA ACAACTGTAT GAGACTTCAG TACCTTTATC 301 ATCTATATGG GCAACACCAC AAGATTTGAG ATCAGGTGGT GGTATAGGAG CAGCAGAGGC 361 TAATGGTGCA AGATTAGCTG CACCATAAAA ACCTCCTAAC CCTAAAAGAA CATTTCTCCT 421 ATCAACAGCG TCAAGGTTTT TGTCATGCTC GCCAACGTTG CATGAAACCT TGAAACTTTG 481 ACAGCGCCTT CCATGGAGGA AAGGTTGAGA GGGTTTTGAT AAGAAAGTAG AGTGGTTGTT 541 GGTGAAGGGA GAAGAGAGGG ATTTGTTGGT GGATAATAAA GGAAGAGTAT TAGGAGTAGA 601 AGAAGA Predicted gene structure (within gDNA segment 15722 to 19289): Exon 1 16332 16934 ( 603 n); cDNA 1 606 ( 606 n); score: 0.883 MATCH C08HBa0336I24.1+ SGN-E312222- 0.883 603 0.995 C PGS_C08HBa0336I24.1+_SGN-E312222- (16332 16934) Alignment (genomic DNA sequence = upper lines): AAAGAAAAGC CACGAGAAAT GAACTTGCAA TTCTTTACCA CCAACTTTGT AAGCACCGTT 16391 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||| | |||||||||| AAAGAAAAGC CACGAGAAAT GAACTTGCAA TTCTTTACCA CCAATTTTAT AAGCACCGTT 60 GCAATAAGCA CAATGAATAT TAGCTTGTTG TTTAAAGCCA AGAGGGTCAA AGGGGTCTTT 16451 ||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| | |||||||| ACAATAAGCA CAATGAATAT TAGCTTGTTG TTTAAACCCA AGAGGGTCAA AAGGGTCTTT 120 ATCAAGTTCC CTCATTCGAC TCGTAGCCAA TTGATACTTG GCTACGTACT CCTCATCCGC 16511 |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| ATCAAGTTCC CTCATTCGAC TTGTAGCCAA TTGATACTTG GCTACGTACT CCTCATCCGC 180 CGCATGAGCA GGGGGGCGGA TGCGGAGTTT AGTCATAGAA GGGAACTTGT AGTACGGAAC 16571 |||||||||| |||||||||| |||||||||| ||||||| | |||||||||| |||||||||| CGCATGAGCA GGGGGGCGGA TGCGGAGTTT CGTCATAGGA GGGAACTTGT AGTACGGAAC 240 ACTATCGATA TCATCGGGTA CAGGAGGGCA ACAACTGTAT ATTACATCAA CACC--T-TC 16628 ||||||||| ||||| |||| |||||||||| |||||||||| || ||| ||| | || GCTATCGATA TCATCAGGTA CAGGAGGGCA ACAACTGTAT GAGACTTCAG TACCTTTATC 300 TTTTACATGG GCAGTACCAC AAGACTTGAG ATCAGGAGGT GGTATAGGTG CAGCAGTCGC 16688 | || |||| ||| ||||| |||| ||||| |||||| ||| |||||||| | |||||| || ATCTATATGG GCAACACCAC AAGATTTGAG ATCAGGTGGT GGTATAGGAG CAGCAGAGGC 360 TAATGGTGCA AGATTAGCTG CACCATAAAG ACCTCCTAAC CCTAAAAGAA CGTTTCGTCT 16748 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| | |||| || TAATGGTGCA AGATTAGCTG CACCATAAAA ACCTCCTAAC CCTAAAAGAA CATTTCTCCT 420 ATCAACAGCG TCAGGGTTTT TGTCAACGTT GTTTGCGTTG CATGAAACCT TGAAACTTTG 16808 |||||||||| ||| |||||| ||||| | | ||||| |||||||||| |||||||||| ATCAACAGCG TCAAGGTTTT TGTCATGCTC GCCAACGTTG CATGAAACCT TGAAACTTTG 480 ATTACGCCTT CCGTGGAGGA AAAGTTGAGA GGGTTTTGAT AACAAGGATG AGTTGGTGGT 16868 | |||||| || ||||||| || ||||||| |||||||||| || || | | ||| | || | ACAGCGCCTT CCATGGAGGA AAGGTTGAGA GGGTTTTGAT AAGAAAGTAG AGTGGTTGTT 540 GGTGAAGGAA GAAGAGAGGG ATTTGTTGGT GCATAAAGGA AGAGTAGTAG TAATAGAAGA 16928 |||||||| | |||||||||| |||||||||| | |||| | || |||| || || ||| GGTGAAGGGA GAAGAGAGGG ATTTGTTGGT GGATAATAAA GGAAGAGTAT TAGGAGTAGA 600 AGAAGA 16934 |||||| AGAAGA 606 hqPGS_C08HBa0336I24.1+_SGN-E312222- (16332 16934) ******************************************************************************** EST sequence 60 -strand 577 n (File: SGN-E313163-) 1 GAAAAGCCAC GAGAAATGAA CTTGCAATTC TTTACCACCA ATTTTATAAG CACCGTTACA 61 ATAAGCACAA TGAATATTAG CTTGTTGTTT AAACCCAAGA GGGTCAAAAG GGTCTTTATC 121 AAGTTCCCTC ATTCGACTTG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC 181 ATGAGCAGGG GGGCGGATGC GGAGTTTCGT CATAGGAGGG AACTTGTAGT ACGGAACGCT 241 ATCGATATCA TCAGGTACAG GAGGGCAACA ACTGTATGAG ACTTCAGTAC CTTTATCATC 301 TATATGGGCA ACACCACAAG ATTTGAGATC AGGTGGTGGT ATAGGAGCAG CAGAGGCTAA 361 TGGTGCAAGA TTAGCTGCAC CATAAAAACC TCCTAACCCT AAAAGAACAT TTCTCCTATC 421 AACAGCGTCA AGGTTTTTGT CATGCTCGCC AACGTTGCAT GAAACCTTGA AACTTTGACA 481 GCGCCTTCCA TGGAGGAAAG GTTGAGAGGG TTTTGATAAG AAAGTAGAGT GGTTGTTGGT 541 GAAGGGAGAA GAGAGGGATT TGTTGGTGGA TAATAAA Predicted gene structure (within gDNA segment 15725 to 19029): Exon 1 16335 16904 ( 570 n); cDNA 1 573 ( 573 n); score: 0.894 MATCH C08HBa0336I24.1+ SGN-E313163- 0.894 570 0.988 C PGS_C08HBa0336I24.1+_SGN-E313163- (16335 16904) Alignment (genomic DNA sequence = upper lines): GAAAAGCCAC GAGAAATGAA CTTGCAATTC TTTACCACCA ACTTTGTAAG CACCGTTGCA 16394 |||||||||| |||||||||| |||||||||| |||||||||| | ||| |||| ||||||| || GAAAAGCCAC GAGAAATGAA CTTGCAATTC TTTACCACCA ATTTTATAAG CACCGTTACA 60 ATAAGCACAA TGAATATTAG CTTGTTGTTT AAAGCCAAGA GGGTCAAAGG GGTCTTTATC 16454 |||||||||| |||||||||| |||||||||| ||| |||||| |||||||| | |||||||||| ATAAGCACAA TGAATATTAG CTTGTTGTTT AAACCCAAGA GGGTCAAAAG GGTCTTTATC 120 AAGTTCCCTC ATTCGACTCG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC 16514 |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| AAGTTCCCTC ATTCGACTTG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC 180 ATGAGCAGGG GGGCGGATGC GGAGTTTAGT CATAGAAGGG AACTTGTAGT ACGGAACACT 16574 |||||||||| |||||||||| ||||||| || ||||| |||| |||||||||| ||||||| || ATGAGCAGGG GGGCGGATGC GGAGTTTCGT CATAGGAGGG AACTTGTAGT ACGGAACGCT 240 ATCGATATCA TCGGGTACAG GAGGGCAACA ACTGTATATT ACATCAACAC C--T-TCTTT 16631 |||||||||| || ||||||| |||||||||| ||||||| || ||| || | | || | ATCGATATCA TCAGGTACAG GAGGGCAACA ACTGTATGAG ACTTCAGTAC CTTTATCATC 300 TACATGGGCA GTACCACAAG ACTTGAGATC AGGAGGTGGT ATAGGTGCAG CAGTCGCTAA 16691 || ||||||| |||||||| | |||||||| ||| |||||| ||||| |||| ||| ||||| TATATGGGCA ACACCACAAG ATTTGAGATC AGGTGGTGGT ATAGGAGCAG CAGAGGCTAA 360 TGGTGCAAGA TTAGCTGCAC CATAAAGACC TCCTAACCCT AAAAGAACGT TTCGTCTATC 16751 |||||||||| |||||||||| |||||| ||| |||||||||| |||||||| | ||| ||||| TGGTGCAAGA TTAGCTGCAC CATAAAAACC TCCTAACCCT AAAAGAACAT TTCTCCTATC 420 AACAGCGTCA GGGTTTTTGT CAACGTTGTT TGCGTTGCAT GAAACCTTGA AACTTTGATT 16811 |||||||||| ||||||||| || | | |||||||| |||||||||| |||||||| AACAGCGTCA AGGTTTTTGT CATGCTCGCC AACGTTGCAT GAAACCTTGA AACTTTGACA 480 ACGCCTTCCG TGGAGGAAAA GTTGAGAGGG TTTTGATAAC AAGGATGAGT TGGTGGTGGT 16871 |||||||| ||||||||| |||||||||| ||||||||| || | |||| | || |||| GCGCCTTCCA TGGAGGAAAG GTTGAGAGGG TTTTGATAAG AAAGTAGAGT GGTTGTTGGT 540 GAAGGAAGAA GAGAGGGATT TGTTGGTGCA TAA 16904 ||||| |||| |||||||||| |||||||| | ||| GAAGGGAGAA GAGAGGGATT TGTTGGTGGA TAA 573 hqPGS_C08HBa0336I24.1+_SGN-E313163- (16335 16904) ******************************************************************************** EST sequence 179 -strand 492 n (File: SGN-E316976-) 1 CACGAGAAAT GAACTTGCAA TTCTTTACCG CCAATGTTAT AAGCGCCGTT ACAATAAGCA 61 CAATGAATAT TAGCTTGTTG TATAAACCCA AGAGGGTCAA AAGGGTCTTA GTCAAGTTCC 121 CTCATTCGAC TTGTAGCCAA TTGATACTTG GGTACGTACT CCTCATCCGC AGCATGAGCA 181 GGGGGGCGGA TGCGGAGTTT AGTCATAGGA GGGAACTTGT AGTACGGAAC GCTATAGATA 241 TCATCAGGTA CAGGAGGGCA ACATCTGTAT GAGACTTCAG TACCTTTATC ATCTATATGG 301 GCAACACCAC AAGATTTGAG ATCAGGTGGT GGTATAGGAG CAGCAGAGGC TAATGGTGCA 361 AGATTAGCTG CACCATAAAA ACCTCCTAAC CTTAAAAGAA CATTTCTCCT ATCAACAGCG 421 TCAAGGTTTT TGTCATGCTC GCCAACGTTG CATGAACCCT TGAAACTTTG ACAGCGCCTT 481 CCATGGAGGA AA Predicted gene structure (within gDNA segment 15273 to 18447): Exon 1 16342 16830 ( 489 n); cDNA 1 492 ( 492 n); score: 0.874 MATCH C08HBa0336I24.1+ SGN-E316976- 0.874 489 0.994 C PGS_C08HBa0336I24.1+_SGN-E316976- (16342 16830) Alignment (genomic DNA sequence = upper lines): CACGAGAAAT GAACTTGCAA TTCTTTACCA CCAACTTTGT AAGCACCGTT GCAATAAGCA 16401 |||||||||| |||||||||| ||||||||| |||| || | |||| ||||| ||||||||| CACGAGAAAT GAACTTGCAA TTCTTTACCG CCAATGTTAT AAGCGCCGTT ACAATAAGCA 60 CAATGAATAT TAGCTTGTTG TTTAAAGCCA AGAGGGTCAA AGGGGTCTTT ATCAAGTTCC 16461 |||||||||| |||||||||| | |||| ||| |||||||||| | ||||||| ||||||||| CAATGAATAT TAGCTTGTTG TATAAACCCA AGAGGGTCAA AAGGGTCTTA GTCAAGTTCC 120 CTCATTCGAC TCGTAGCCAA TTGATACTTG GCTACGTACT CCTCATCCGC CGCATGAGCA 16521 |||||||||| | |||||||| |||||||||| | |||||||| |||||||||| ||||||||| CTCATTCGAC TTGTAGCCAA TTGATACTTG GGTACGTACT CCTCATCCGC AGCATGAGCA 180 GGGGGGCGGA TGCGGAGTTT AGTCATAGAA GGGAACTTGT AGTACGGAAC ACTATCGATA 16581 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| |||| |||| GGGGGGCGGA TGCGGAGTTT AGTCATAGGA GGGAACTTGT AGTACGGAAC GCTATAGATA 240 TCATCGGGTA CAGGAGGGCA ACAACTGTAT ATTACATCAA CACC--T-TC TTTTACATGG 16638 ||||| |||| |||||||||| ||| |||||| || ||| ||| | || | || |||| TCATCAGGTA CAGGAGGGCA ACATCTGTAT GAGACTTCAG TACCTTTATC ATCTATATGG 300 GCAGTACCAC AAGACTTGAG ATCAGGAGGT GGTATAGGTG CAGCAGTCGC TAATGGTGCA 16698 ||| ||||| |||| ||||| |||||| ||| |||||||| | |||||| || |||||||||| GCAACACCAC AAGATTTGAG ATCAGGTGGT GGTATAGGAG CAGCAGAGGC TAATGGTGCA 360 AGATTAGCTG CACCATAAAG ACCTCCTAAC CCTAAAAGAA CGTTTCGTCT ATCAACAGCG 16758 |||||||||| ||||||||| |||||||||| | |||||||| | |||| || |||||||||| AGATTAGCTG CACCATAAAA ACCTCCTAAC CTTAAAAGAA CATTTCTCCT ATCAACAGCG 420 TCAGGGTTTT TGTCAACGTT GTTTGCGTTG CATGAAACCT TGAAACTTTG ATTACGCCTT 16818 ||| |||||| ||||| | | ||||| |||||| ||| |||||||||| | |||||| TCAAGGTTTT TGTCATGCTC GCCAACGTTG CATGAACCCT TGAAACTTTG ACAGCGCCTT 480 CCGTGGAGGA AA 16830 || ||||||| || CCATGGAGGA AA 492 hqPGS_C08HBa0336I24.1+_SGN-E316976- (16342 16830) ******************************************************************************** EST sequence 71 -strand 586 n (File: SGN-E325836-) 1 CGAGAAATGA ACTTGCAATT CTTTACCACC AATTTTATAA GCACCGTTAC AATAAGCACA 61 ATGAATATTA GCTTGTTGTT TAAACCCAAG AGGGTCAAAA GGGTCTTTAT CAAGTTCCCT 121 CATTCGACTT GTAGCCAATT GATACTTGGC TACGTACTCC TCATCCGCCG CATGAGCAGG 181 GGGGCGGATG CGGAGTTTCG TCATAGGAGG GAACTTGTAG TACGGAACGC TATCGATATC 241 ATCAGGTACA GGAGGGCAAC AACTGTATGA GACTTCAGTA CCTTTATCAT CTATATGGGC 301 AACACCACAA GATTTGAGAT CAGGTGGTGG TATAGGAGCA GCAGAGGCTA ATGGTGCAAG 361 ATTAGCTGCA CCATAAAAAC CTCCTAACCC TAAAAGAACA TTTCTCCTAT CAACAGCGTC 421 AAGGTTTTTG TCATGCTCGC CAACGTTGCA TGAAACCTTG AAACTTTGAC AGCGCCTTCC 481 ATGGAGGAAA GGTTGAGAGG GTTTTGATAA GAAAGTAGAG TGGTTGTTGG TGAAGGGAGA 541 AGAGAGGGAT TTGTTGGTGG ATAATAAAGG AAGAGTATTA GGAGTA Predicted gene structure (within gDNA segment 15734 to 19209): Exon 1 16344 16924 ( 581 n); cDNA 1 584 ( 584 n); score: 0.880 MATCH C08HBa0336I24.1+ SGN-E325836- 0.880 581 0.991 C PGS_C08HBa0336I24.1+_SGN-E325836- (16344 16924) Alignment (genomic DNA sequence = upper lines): CGAGAAATGA ACTTGCAATT CTTTACCACC AACTTTGTAA GCACCGTTGC AATAAGCACA 16403 |||||||||| |||||||||| |||||||||| || ||| ||| |||||||| | |||||||||| CGAGAAATGA ACTTGCAATT CTTTACCACC AATTTTATAA GCACCGTTAC AATAAGCACA 60 ATGAATATTA GCTTGTTGTT TAAAGCCAAG AGGGTCAAAG GGGTCTTTAT CAAGTTCCCT 16463 |||||||||| |||||||||| |||| ||||| ||||||||| |||||||||| |||||||||| ATGAATATTA GCTTGTTGTT TAAACCCAAG AGGGTCAAAA GGGTCTTTAT CAAGTTCCCT 120 CATTCGACTC GTAGCCAATT GATACTTGGC TACGTACTCC TCATCCGCCG CATGAGCAGG 16523 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTCGACTT GTAGCCAATT GATACTTGGC TACGTACTCC TCATCCGCCG CATGAGCAGG 180 GGGGCGGATG CGGAGTTTAG TCATAGAAGG GAACTTGTAG TACGGAACAC TATCGATATC 16583 |||||||||| |||||||| | |||||| ||| |||||||||| |||||||| | |||||||||| GGGGCGGATG CGGAGTTTCG TCATAGGAGG GAACTTGTAG TACGGAACGC TATCGATATC 240 ATCGGGTACA GGAGGGCAAC AACTGTATAT TACATCAACA CC--T-TCTT TTACATGGGC 16640 ||| |||||| |||||||||| |||||||| || ||| | || | || | || |||||| ATCAGGTACA GGAGGGCAAC AACTGTATGA GACTTCAGTA CCTTTATCAT CTATATGGGC 300 AGTACCACAA GACTTGAGAT CAGGAGGTGG TATAGGTGCA GCAGTCGCTA ATGGTGCAAG 16700 | ||||||| || ||||||| |||| ||||| |||||| ||| |||| |||| |||||||||| AACACCACAA GATTTGAGAT CAGGTGGTGG TATAGGAGCA GCAGAGGCTA ATGGTGCAAG 360 ATTAGCTGCA CCATAAAGAC CTCCTAACCC TAAAAGAACG TTTCGTCTAT CAACAGCGTC 16760 |||||||||| ||||||| || |||||||||| ||||||||| |||| |||| |||||||||| ATTAGCTGCA CCATAAAAAC CTCCTAACCC TAAAAGAACA TTTCTCCTAT CAACAGCGTC 420 AGGGTTTTTG TCAACGTTGT TTGCGTTGCA TGAAACCTTG AAACTTTGAT TACGCCTTCC 16820 | |||||||| ||| | | ||||||| |||||||||| ||||||||| |||||||| AAGGTTTTTG TCATGCTCGC CAACGTTGCA TGAAACCTTG AAACTTTGAC AGCGCCTTCC 480 GTGGAGGAAA AGTTGAGAGG GTTTTGATAA CAAGGATGAG TTGGTGGTGG TGAAGGAAGA 16880 ||||||||| ||||||||| |||||||||| || | ||| | | || ||| |||||| ||| ATGGAGGAAA GGTTGAGAGG GTTTTGATAA GAAAGTAGAG TGGTTGTTGG TGAAGGGAGA 540 AGAGAGGGAT TTGTTGGTGC ATAAAGGAAG AGTAGTAGTA ATAG 16924 |||||||||| ||||||||| |||| | | | |||| || || AGAGAGGGAT TTGTTGGTGG ATAATAAAGG AAGAGTATTA GGAG 584 hqPGS_C08HBa0336I24.1+_SGN-E325836- (16344 16924) ******************************************************************************** EST sequence 292 -strand 593 n (File: SGN-E314459-) 1 GAGAAATGAA CTTGCAATTC TTTACCACCA ATTTTATAAG CACCGTTACA ATAAGCACAA 61 TGAATATTAG CTTGTTGTTT AAACCCAAGA GGGTCAAAAG GGTCTTTATC AAGTTCCCTC 121 ATTCGACTTG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC ATGAGCAGGG 181 GGGCGGATGC GGAGTTTCGT CATAGGAGGG AACTTGTAGT ACGGAACGCT ATCGATATCA 241 TCAGGTACAG GAGGGCAACA ACTGTATGAG ACTTCAGTAC CTTTATCATC TATATGGGCA 301 ACACCACAAG ATTTGAGATC AGGTGGTGGT ATAGGAGCAG CAGAGGCTAA TGGTGCAAGA 361 TTAGCTGCAC CATAAAAACC TCCTAACCCT AAAAGAACAT TTCTACTATC AACAGCGTCA 421 AGGTTTTTGT CATGCTCGCC AACGTTGCAT GAAACCTTGA AACTTTGACA GCGCCTTCCA 481 TGGAGGAAAG GTTGAGAGGG TTTTGATAAG AAAGTAGAGT GGTTGTTGGT GAAGGGAGAA 541 GAGAGGGATT TGTTGATGGA TAATAAAGGA AGAGTATTAG AAATAGAAGA AGA Predicted gene structure (within gDNA segment 15735 to 19289): Exon 1 16345 16934 ( 590 n); cDNA 1 593 ( 593 n); score: 0.877 MATCH C08HBa0336I24.1+ SGN-E314459- 0.877 590 0.995 C PGS_C08HBa0336I24.1+_SGN-E314459- (16345 16934) Alignment (genomic DNA sequence = upper lines): GAGAAATGAA CTTGCAATTC TTTACCACCA ACTTTGTAAG CACCGTTGCA ATAAGCACAA 16404 |||||||||| |||||||||| |||||||||| | ||| |||| ||||||| || |||||||||| GAGAAATGAA CTTGCAATTC TTTACCACCA ATTTTATAAG CACCGTTACA ATAAGCACAA 60 TGAATATTAG CTTGTTGTTT AAAGCCAAGA GGGTCAAAGG GGTCTTTATC AAGTTCCCTC 16464 |||||||||| |||||||||| ||| |||||| |||||||| | |||||||||| |||||||||| TGAATATTAG CTTGTTGTTT AAACCCAAGA GGGTCAAAAG GGTCTTTATC AAGTTCCCTC 120 ATTCGACTCG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC ATGAGCAGGG 16524 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTCGACTTG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC ATGAGCAGGG 180 GGGCGGATGC GGAGTTTAGT CATAGAAGGG AACTTGTAGT ACGGAACACT ATCGATATCA 16584 |||||||||| ||||||| || ||||| |||| |||||||||| ||||||| || |||||||||| GGGCGGATGC GGAGTTTCGT CATAGGAGGG AACTTGTAGT ACGGAACGCT ATCGATATCA 240 TCGGGTACAG GAGGGCAACA ACTGTATATT ACATCAACAC C--T-TCTTT TACATGGGCA 16641 || ||||||| |||||||||| ||||||| || ||| || | | || | || ||||||| TCAGGTACAG GAGGGCAACA ACTGTATGAG ACTTCAGTAC CTTTATCATC TATATGGGCA 300 GTACCACAAG ACTTGAGATC AGGAGGTGGT ATAGGTGCAG CAGTCGCTAA TGGTGCAAGA 16701 |||||||| | |||||||| ||| |||||| ||||| |||| ||| ||||| |||||||||| ACACCACAAG ATTTGAGATC AGGTGGTGGT ATAGGAGCAG CAGAGGCTAA TGGTGCAAGA 360 TTAGCTGCAC CATAAAGACC TCCTAACCCT AAAAGAACGT TTCGTCTATC AACAGCGTCA 16761 |||||||||| |||||| ||| |||||||||| |||||||| | ||| ||||| |||||||||| TTAGCTGCAC CATAAAAACC TCCTAACCCT AAAAGAACAT TTCTACTATC AACAGCGTCA 420 GGGTTTTTGT CAACGTTGTT TGCGTTGCAT GAAACCTTGA AACTTTGATT ACGCCTTCCG 16821 ||||||||| || | | |||||||| |||||||||| |||||||| |||||||| AGGTTTTTGT CATGCTCGCC AACGTTGCAT GAAACCTTGA AACTTTGACA GCGCCTTCCA 480 TGGAGGAAAA GTTGAGAGGG TTTTGATAAC AAGGATGAGT TGGTGGTGGT GAAGGAAGAA 16881 ||||||||| |||||||||| ||||||||| || | |||| | || |||| ||||| |||| TGGAGGAAAG GTTGAGAGGG TTTTGATAAG AAAGTAGAGT GGTTGTTGGT GAAGGGAGAA 540 GAGAGGGATT TGTTGGTGCA TAAAGGAAGA GTAGTAGTAA TAGAAGAAGA AGA 16934 |||||||||| ||||| || | ||| | || |||| || | |||||| ||| GAGAGGGATT TGTTGATGGA TAATAAAGGA AGAGTATTAG AAATAGAAGA AGA 593 hqPGS_C08HBa0336I24.1+_SGN-E314459- (16345 16934) ******************************************************************************** EST sequence 138 -strand 550 n (File: SGN-E327214-) 1 GAGAAATGAA CTTGCAATCT TTACCACCAA TTTTATAAGC ACCGTTACAA TAAGCACAAT 61 GAATATTAGC TTGTTGTTTA AACCCAAGAG GGTCAAAAGG GTCTTTATCA AGTTCCCTCA 121 TTCGACTTGT AGCCAATTGA TACTTGGCTA CGTACTCCTC ATCCGCCGCA TGAGCAGGGG 181 GGCGGATGCG GAGTTTCGTC ATAGGAGGGA ACTTGTAGTA CGGAACGCTA TCGATATCAT 241 CAGGTACAGG AGGGCAACAA CTGTATGAGA CTTCAGTACC TTTATCATCT ATATGGGCAA 301 CACCACAAGA TTTGAGATCA GGTGGTGGTA TAGGAGCAGC AGAGGCTAAT GGTGCAAGAT 361 TAGCTGCACC ATAAAAACCT CCTAACCCTA AAAGAACATT TCTCCTATCA ACAGCGTCAA 421 GGTTTTTGTC ATGCTCGCCA ACGTTGCATG AAACCTTGAA ACTTTGACAG CGCCTTCCAT 481 GGAGGAAAGG TTGAGAGGGT TTTGATAAGA AAGTAGAGTG GTTGTTGGTG AAGGGAGAAG 541 AGAGGGATTT Predicted gene structure (within gDNA segment 15313 to 18869): Exon 1 16345 16892 ( 548 n); cDNA 1 550 ( 550 n); score: 0.890 MATCH C08HBa0336I24.1+ SGN-E327214- 0.890 548 0.996 C PGS_C08HBa0336I24.1+_SGN-E327214- (16345 16892) Alignment (genomic DNA sequence = upper lines): GAGAAATGAA CTTGCAATTC TTTACCACCA ACTTTGTAAG CACCGTTGCA ATAAGCACAA 16404 |||||||||| ||||||| || |||||||||| | ||| |||| ||||||| || |||||||||| GAGAAATGAA CTTGCAA-TC TTTACCACCA ATTTTATAAG CACCGTTACA ATAAGCACAA 59 TGAATATTAG CTTGTTGTTT AAAGCCAAGA GGGTCAAAGG GGTCTTTATC AAGTTCCCTC 16464 |||||||||| |||||||||| ||| |||||| |||||||| | |||||||||| |||||||||| TGAATATTAG CTTGTTGTTT AAACCCAAGA GGGTCAAAAG GGTCTTTATC AAGTTCCCTC 119 ATTCGACTCG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC ATGAGCAGGG 16524 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTCGACTTG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC ATGAGCAGGG 179 GGGCGGATGC GGAGTTTAGT CATAGAAGGG AACTTGTAGT ACGGAACACT ATCGATATCA 16584 |||||||||| ||||||| || ||||| |||| |||||||||| ||||||| || |||||||||| GGGCGGATGC GGAGTTTCGT CATAGGAGGG AACTTGTAGT ACGGAACGCT ATCGATATCA 239 TCGGGTACAG GAGGGCAACA ACTGTATATT ACATCAACAC C--T-TCTTT TACATGGGCA 16641 || ||||||| |||||||||| ||||||| || ||| || | | || | || ||||||| TCAGGTACAG GAGGGCAACA ACTGTATGAG ACTTCAGTAC CTTTATCATC TATATGGGCA 299 GTACCACAAG ACTTGAGATC AGGAGGTGGT ATAGGTGCAG CAGTCGCTAA TGGTGCAAGA 16701 |||||||| | |||||||| ||| |||||| ||||| |||| ||| ||||| |||||||||| ACACCACAAG ATTTGAGATC AGGTGGTGGT ATAGGAGCAG CAGAGGCTAA TGGTGCAAGA 359 TTAGCTGCAC CATAAAGACC TCCTAACCCT AAAAGAACGT TTCGTCTATC AACAGCGTCA 16761 |||||||||| |||||| ||| |||||||||| |||||||| | ||| ||||| |||||||||| TTAGCTGCAC CATAAAAACC TCCTAACCCT AAAAGAACAT TTCTCCTATC AACAGCGTCA 419 GGGTTTTTGT CAACGTTGTT TGCGTTGCAT GAAACCTTGA AACTTTGATT ACGCCTTCCG 16821 ||||||||| || | | |||||||| |||||||||| |||||||| |||||||| AGGTTTTTGT CATGCTCGCC AACGTTGCAT GAAACCTTGA AACTTTGACA GCGCCTTCCA 479 TGGAGGAAAA GTTGAGAGGG TTTTGATAAC AAGGATGAGT TGGTGGTGGT GAAGGAAGAA 16881 ||||||||| |||||||||| ||||||||| || | |||| | || |||| ||||| |||| TGGAGGAAAG GTTGAGAGGG TTTTGATAAG AAAGTAGAGT GGTTGTTGGT GAAGGGAGAA 539 GAGAGGGATT T 16892 |||||||||| | GAGAGGGATT T 550 hqPGS_C08HBa0336I24.1+_SGN-E327214- (16345 16892) ******************************************************************************** EST sequence 253 -strand 586 n (File: SGN-E324317-) 1 TGAACTTGCA ATTCTTTACC ACCAATTTTA TAAGCACCGT TACAATAAGC ACAATGAATA 61 TTAGCTTGTT GTTTAAACCC AAGAGGGTCA AAAGGGTCTT TATCAAGTTC CCTCATTCGA 121 CTTGTAGCCA ATTGATACTT GGCTACGTAC TCCTCATCCG CCGCATGAGC AGGGGGGCGG 181 ATGCGGAGTT TCGTCATAGG AGGGAACTTG TAGTACGGAA CGCTATCGAT ATCATCAGGT 241 ACAGGAGGGC AACAACTGTA TGAGACTTCA GTACCTTTAT CATCTATATG GGCAACACCA 301 CAAGATTTGA GATCAGGTGG TGGTATAGGA GCAGCAGAGG CTAATGGTGC AAGATTAGCT 361 GCACCATAAA AACCTCCTAA CCCTAAAAGA ACATTTCTCC TATCAACAGC GTCAAGGTTT 421 TTGTCATGCT CGCCAACGTT GCATGAAACC TTGAAACTTT GACAGCGCCT TCCATGGAGG 481 AAAGGTTGAG AGGGTTTTGA TAAGAAAGTA GAGTGGTTGT TGGTGAAGGG AGAAGAGAGG 541 GATTTGTTGG TGGCTCATAA AGGAAGAGTA TTAGGAGTAG AAGAAG Predicted gene structure (within gDNA segment 15741 to 19279): Exon 1 16351 16930 ( 580 n); cDNA 1 586 ( 586 n); score: 0.879 MATCH C08HBa0336I24.1+ SGN-E324317- 0.879 580 0.990 C PGS_C08HBa0336I24.1+_SGN-E324317- (16351 16930) Alignment (genomic DNA sequence = upper lines): TGAACTTGCA ATTCTTTACC ACCAACTTTG TAAGCACCGT TGCAATAAGC ACAATGAATA 16410 |||||||||| |||||||||| ||||| ||| |||||||||| | |||||||| |||||||||| TGAACTTGCA ATTCTTTACC ACCAATTTTA TAAGCACCGT TACAATAAGC ACAATGAATA 60 TTAGCTTGTT GTTTAAAGCC AAGAGGGTCA AAGGGGTCTT TATCAAGTTC CCTCATTCGA 16470 |||||||||| ||||||| || |||||||||| || ||||||| |||||||||| |||||||||| TTAGCTTGTT GTTTAAACCC AAGAGGGTCA AAAGGGTCTT TATCAAGTTC CCTCATTCGA 120 CTCGTAGCCA ATTGATACTT GGCTACGTAC TCCTCATCCG CCGCATGAGC AGGGGGGCGG 16530 || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGTAGCCA ATTGATACTT GGCTACGTAC TCCTCATCCG CCGCATGAGC AGGGGGGCGG 180 ATGCGGAGTT TAGTCATAGA AGGGAACTTG TAGTACGGAA CACTATCGAT ATCATCGGGT 16590 |||||||||| | ||||||| |||||||||| |||||||||| | |||||||| |||||| ||| ATGCGGAGTT TCGTCATAGG AGGGAACTTG TAGTACGGAA CGCTATCGAT ATCATCAGGT 240 ACAGGAGGGC AACAACTGTA TATTACATCA ACACC--T-T CTTTTACATG GGCAGTACCA 16647 |||||||||| |||||||||| | || ||| ||| | | | | || ||| |||| |||| ACAGGAGGGC AACAACTGTA TGAGACTTCA GTACCTTTAT CATCTATATG GGCAACACCA 300 CAAGACTTGA GATCAGGAGG TGGTATAGGT GCAGCAGTCG CTAATGGTGC AAGATTAGCT 16707 ||||| |||| ||||||| || ||||||||| ||||||| | |||||||||| |||||||||| CAAGATTTGA GATCAGGTGG TGGTATAGGA GCAGCAGAGG CTAATGGTGC AAGATTAGCT 360 GCACCATAAA GACCTCCTAA CCCTAAAAGA ACGTTTCGTC TATCAACAGC GTCAGGGTTT 16767 |||||||||| ||||||||| |||||||||| || |||| | |||||||||| |||| ||||| GCACCATAAA AACCTCCTAA CCCTAAAAGA ACATTTCTCC TATCAACAGC GTCAAGGTTT 420 TTGTCAACGT TGTTTGCGTT GCATGAAACC TTGAAACTTT GATTACGCCT TCCGTGGAGG 16827 |||||| | | |||| |||||||||| |||||||||| || ||||| ||| |||||| TTGTCATGCT CGCCAACGTT GCATGAAACC TTGAAACTTT GACAGCGCCT TCCATGGAGG 480 AAAAGTTGAG AGGGTTTTGA TAACAAGGAT GAGTTGGTGG TGGTGAAGGA AGAAGAGAGG 16887 ||| |||||| |||||||||| ||| || | |||| | || ||||||||| |||||||||| AAAGGTTGAG AGGGTTTTGA TAAGAAAGTA GAGTGGTTGT TGGTGAAGGG AGAAGAGAGG 540 GATTTGTTGG T-G--CATAA AGGAAGAGTA GTAGTAATAG AAGAAG 16930 |||||||||| | | ||||| |||||||||| ||| | ||| |||||| GATTTGTTGG TGGCTCATAA AGGAAGAGTA TTAGGAGTAG AAGAAG 586 hqPGS_C08HBa0336I24.1+_SGN-E324317- (16351 16930) ******************************************************************************** EST sequence 362 -strand 564 n (File: SGN-E311992-) 1 CAATTTTATA AGCACCGTTA CAATAAGCAC AATGAATATT AGCTTGTTGT TTAAACCCAA 61 GAGGGTCAAA AGGGTCTTTA TCAAGTTCCC TCATTCGACT TGTAGCCAAT TGATACTTGG 121 CTACGTACTC CTCATCCGCC GCATGAGCAG GGGGGCGGAT GCGGAGTTTC GTCATAGGAG 181 GGAACTTGTA GTACGGAACG CTATCGATAT CATCAGGTAC AGGAGGGCAA CAACTGTATG 241 AGACTTCAGT ACCTTTATCA TCTATATGGG CAACACCACA AGATTTGAGA TCAGGTGGTG 301 GTATAGGAGC AGCAGAGGCT AATGGTGCAA GATTAGCTGC ACCATAAAAA CCTCCTAACC 361 CTAAAAGAAC ATTTCTCCTA TCAACAGCGT CAAGGTTTTT GTCATGCTCG CCAACGTTGC 421 ATGAAACCTT GAAACTTTGA CAGCGCCTTC CATGGAGGAA AGGTTGAGAG GGTTTTGATA 481 AGAAAGTAGA GTGGTTGTTG GTGAAGGGAG AAGAGAGGGA TTTGTTGGTG GATAATAAAG 541 GAAGAGTATT AGGAGTAGAA GAAG Predicted gene structure (within gDNA segment 15583 to 19279): Exon 1 16373 16933 ( 561 n); cDNA 1 564 ( 564 n); score: 0.874 MATCH C08HBa0336I24.1+ SGN-E311992- 0.874 561 0.995 C PGS_C08HBa0336I24.1+_SGN-E311992- (16373 16933) Alignment (genomic DNA sequence = upper lines): CAACTTTGTA AGCACCGTTG CAATAAGCAC AATGAATATT AGCTTGTTGT TTAAAGCCAA 16432 ||| ||| || ||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CAATTTTATA AGCACCGTTA CAATAAGCAC AATGAATATT AGCTTGTTGT TTAAACCCAA 60 GAGGGTCAAA GGGGTCTTTA TCAAGTTCCC TCATTCGACT CGTAGCCAAT TGATACTTGG 16492 |||||||||| ||||||||| |||||||||| |||||||||| ||||||||| |||||||||| GAGGGTCAAA AGGGTCTTTA TCAAGTTCCC TCATTCGACT TGTAGCCAAT TGATACTTGG 120 CTACGTACTC CTCATCCGCC GCATGAGCAG GGGGGCGGAT GCGGAGTTTA GTCATAGAAG 16552 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| ||||||| || CTACGTACTC CTCATCCGCC GCATGAGCAG GGGGGCGGAT GCGGAGTTTC GTCATAGGAG 180 GGAACTTGTA GTACGGAACA CTATCGATAT CATCGGGTAC AGGAGGGCAA CAACTGTATA 16612 |||||||||| ||||||||| |||||||||| |||| ||||| |||||||||| ||||||||| GGAACTTGTA GTACGGAACG CTATCGATAT CATCAGGTAC AGGAGGGCAA CAACTGTATG 240 TTACATCAAC ACC--T-TCT TTTACATGGG CAGTACCACA AGACTTGAGA TCAGGAGGTG 16669 || ||| ||| | || | || ||||| || |||||| ||| |||||| ||||| |||| AGACTTCAGT ACCTTTATCA TCTATATGGG CAACACCACA AGATTTGAGA TCAGGTGGTG 300 GTATAGGTGC AGCAGTCGCT AATGGTGCAA GATTAGCTGC ACCATAAAGA CCTCCTAACC 16729 ||||||| || ||||| ||| |||||||||| |||||||||| |||||||| | |||||||||| GTATAGGAGC AGCAGAGGCT AATGGTGCAA GATTAGCTGC ACCATAAAAA CCTCCTAACC 360 CTAAAAGAAC GTTTCGTCTA TCAACAGCGT CAGGGTTTTT GTCAACGTTG TTTGCGTTGC 16789 |||||||||| |||| ||| |||||||||| || ||||||| |||| | | |||||| CTAAAAGAAC ATTTCTCCTA TCAACAGCGT CAAGGTTTTT GTCATGCTCG CCAACGTTGC 420 ATGAAACCTT GAAACTTTGA TTACGCCTTC CGTGGAGGAA AAGTTGAGAG GGTTTTGATA 16849 |||||||||| |||||||||| ||||||| | |||||||| | |||||||| |||||||||| ATGAAACCTT GAAACTTTGA CAGCGCCTTC CATGGAGGAA AGGTTGAGAG GGTTTTGATA 480 ACAAGGATGA GTTGGTGGTG GTGAAGGAAG AAGAGAGGGA TTTGTTGGTG CATAAAGGAA 16909 | || | || || | || || ||||||| || |||||||||| |||||||||| |||| | AGAAAGTAGA GTGGTTGTTG GTGAAGGGAG AAGAGAGGGA TTTGTTGGTG GATAATAAAG 540 GAGTAGTAGT AATAGAAGAA GAAG 16933 || |||| | | || |||| |||| GAAGAGTATT AGGAGTAGAA GAAG 564 hqPGS_C08HBa0336I24.1+_SGN-E311992- (16373 16933) ******************************************************************************** EST sequence 333 -strand 559 n (File: SGN-E310420-) 1 CAATTTTATA AGCACCGTTA CAATAAGCAC AATGAATATT AGCTTGTTGT TTAAACCCAA 61 GAGGGTCAAA AGGGTCTTTA TCAAGTTCCC TCATTCGACT TGTAGCCAAT TGATACTTGG 121 CTACGTACTC CTCATCCGCC GCATGAGCAG GGGGGCGGAT GCGGAGTTTC GTCATAGGAG 181 GGAACTTGTA GTACGGAACG CTATCGATAT CATCAGGTAC AGGAGGGCAA CAACTGTATG 241 AGACTTCAGT ACCTTTATCA TCTATATGGG CAACACCACA AGATTTGAGA TCAGGTGGTG 301 GTATAGGAGC AGCAGAGGCT AATGGTGCAA GATTAGCTGC ACCATAAAAA CCTCCTAACC 361 CTAAAAGAAC ATTTCTCCTA TCAACAGCGT CAAGGTTTTT GTCATGCTCG CCAACGTTGC 421 ATGAAACCTT GAAACTTTGA CAGCGCCTTC CATGGAGGAA AGGTTGAGAG GGTTTTGATA 481 AGAAAGTAGA GTGGTTGTTG GTGAAGGGAG AAGAGAGGGA TTTGTTGGTG GATAATAAAG 541 GAAGAGTATT AGGAGTAGA Predicted gene structure (within gDNA segment 15583 to 19229): Exon 1 16373 16928 ( 556 n); cDNA 1 559 ( 559 n); score: 0.873 MATCH C08HBa0336I24.1+ SGN-E310420- 0.873 556 0.995 C PGS_C08HBa0336I24.1+_SGN-E310420- (16373 16928) Alignment (genomic DNA sequence = upper lines): CAACTTTGTA AGCACCGTTG CAATAAGCAC AATGAATATT AGCTTGTTGT TTAAAGCCAA 16432 ||| ||| || ||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CAATTTTATA AGCACCGTTA CAATAAGCAC AATGAATATT AGCTTGTTGT TTAAACCCAA 60 GAGGGTCAAA GGGGTCTTTA TCAAGTTCCC TCATTCGACT CGTAGCCAAT TGATACTTGG 16492 |||||||||| ||||||||| |||||||||| |||||||||| ||||||||| |||||||||| GAGGGTCAAA AGGGTCTTTA TCAAGTTCCC TCATTCGACT TGTAGCCAAT TGATACTTGG 120 CTACGTACTC CTCATCCGCC GCATGAGCAG GGGGGCGGAT GCGGAGTTTA GTCATAGAAG 16552 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| ||||||| || CTACGTACTC CTCATCCGCC GCATGAGCAG GGGGGCGGAT GCGGAGTTTC GTCATAGGAG 180 GGAACTTGTA GTACGGAACA CTATCGATAT CATCGGGTAC AGGAGGGCAA CAACTGTATA 16612 |||||||||| ||||||||| |||||||||| |||| ||||| |||||||||| ||||||||| GGAACTTGTA GTACGGAACG CTATCGATAT CATCAGGTAC AGGAGGGCAA CAACTGTATG 240 TTACATCAAC ACC--T-TCT TTTACATGGG CAGTACCACA AGACTTGAGA TCAGGAGGTG 16669 || ||| ||| | || | || ||||| || |||||| ||| |||||| ||||| |||| AGACTTCAGT ACCTTTATCA TCTATATGGG CAACACCACA AGATTTGAGA TCAGGTGGTG 300 GTATAGGTGC AGCAGTCGCT AATGGTGCAA GATTAGCTGC ACCATAAAGA CCTCCTAACC 16729 ||||||| || ||||| ||| |||||||||| |||||||||| |||||||| | |||||||||| GTATAGGAGC AGCAGAGGCT AATGGTGCAA GATTAGCTGC ACCATAAAAA CCTCCTAACC 360 CTAAAAGAAC GTTTCGTCTA TCAACAGCGT CAGGGTTTTT GTCAACGTTG TTTGCGTTGC 16789 |||||||||| |||| ||| |||||||||| || ||||||| |||| | | |||||| CTAAAAGAAC ATTTCTCCTA TCAACAGCGT CAAGGTTTTT GTCATGCTCG CCAACGTTGC 420 ATGAAACCTT GAAACTTTGA TTACGCCTTC CGTGGAGGAA AAGTTGAGAG GGTTTTGATA 16849 |||||||||| |||||||||| ||||||| | |||||||| | |||||||| |||||||||| ATGAAACCTT GAAACTTTGA CAGCGCCTTC CATGGAGGAA AGGTTGAGAG GGTTTTGATA 480 ACAAGGATGA GTTGGTGGTG GTGAAGGAAG AAGAGAGGGA TTTGTTGGTG CATAAAGGAA 16909 | || | || || | || || ||||||| || |||||||||| |||||||||| |||| | AGAAAGTAGA GTGGTTGTTG GTGAAGGGAG AAGAGAGGGA TTTGTTGGTG GATAATAAAG 540 GAGTAGTAGT AATAGAAGA 16928 || |||| | | || ||| GAAGAGTATT AGGAGTAGA 559 hqPGS_C08HBa0336I24.1+_SGN-E310420- (16373 16928) ******************************************************************************** EST sequence 132 -strand 553 n (File: SGN-E316163-) 1 ATAAGCACCG TTACAATAAG CACAATGAAT ATTAGCTTGT TGTTTAAACC CAAGAGGTCA 61 AAAGGGTTCT TANTCAAGTT TCCTCATTCG ACTTGTAGCC AATTGATACT TGGCTACGTA 121 CTCCTCATCC GCCGCATGAG CAGGGGGGCG GATGCGGAGT TTCGTCATAG GAGGGAACTT 181 GTAGTACGGA ACGCTATCGA TATCATCAGG TACAGGAGGG CAACAACTGT ATGAGACTTC 241 AGTACCTTTA TCATCTATAT GGGCAACACC ACAAGATTTG AGATCAGGTG GTGGTATAGG 301 AGCAGCAGAG GCTAATGGTG CAAGATTAGC TGCACCATAA AAACCTCCTA ACCCTAAAAG 361 AACATTTCTC CTATCAACAG CGTCAAGGTT TTTGTCATGC TCGCCAACGT TGCATGAAAC 421 CTTGAAACTT TGACAGCGCC TTCCATGGAG GAAAGGTTGA GAGGGTTTTG ATAAGAAAGT 481 AGAGTGGTTG TTGGTGAAGG GAGAAGAGAG GGATTTGTTG GTGGATAATA AAGGAAGAGT 541 ATTAGGAGTA GAA Predicted gene structure (within gDNA segment 15653 to 19239): Exon 1 16381 16929 ( 549 n); cDNA 2 553 ( 552 n); score: 0.864 MATCH C08HBa0336I24.1+ SGN-E316163- 0.864 549 0.993 C PGS_C08HBa0336I24.1+_SGN-E316163- (16381 16929) Alignment (genomic DNA sequence = upper lines): TAAGCACCGT TGCAATAAGC ACAATGAATA TTAGCTTGTT GTTTAAAGCC AAGAGGGTCA 16440 |||||||||| | |||||||| |||||||||| |||||||||| ||||||| || |||||| | TAAGCACCGT TACAATAAGC ACAATGAATA TTAGCTTGTT GTTTAAACCC AAGAGGTCAA 61 AAGGGGTCTT TATCAAGTTC CCTCATTCGA CTCGTAGCCA ATTGATACTT GGCTACGTAC 16500 ||||| |||| ||||||| |||||||||| || ||||||| |||||||||| |||||||||| AAGGGTTCTT ANTCAAGTTT CCTCATTCGA CTTGTAGCCA ATTGATACTT GGCTACGTAC 121 TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT TAGTCATAGA AGGGAACTTG 16560 |||||||||| |||||||||| |||||||||| |||||||||| | ||||||| |||||||||| TCCTCATCCG CCGCATGAGC AGGGGGGCGG ATGCGGAGTT TCGTCATAGG AGGGAACTTG 181 TAGTACGGAA CACTATCGAT ATCATCGGGT ACAGGAGGGC AACAACTGTA TATTACATCA 16620 |||||||||| | |||||||| |||||| ||| |||||||||| |||||||||| | || ||| TAGTACGGAA CGCTATCGAT ATCATCAGGT ACAGGAGGGC AACAACTGTA TGAGACTTCA 241 ACACC--T-T CTTTTACATG GGCAGTACCA CAAGACTTGA GATCAGGAGG TGGTATAGGT 16677 ||| | | | | || ||| |||| |||| ||||| |||| ||||||| || ||||||||| GTACCTTTAT CATCTATATG GGCAACACCA CAAGATTTGA GATCAGGTGG TGGTATAGGA 301 GCAGCAGTCG CTAATGGTGC AAGATTAGCT GCACCATAAA GACCTCCTAA CCCTAAAAGA 16737 ||||||| | |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| GCAGCAGAGG CTAATGGTGC AAGATTAGCT GCACCATAAA AACCTCCTAA CCCTAAAAGA 361 ACGTTTCGTC TATCAACAGC GTCAGGGTTT TTGTCAACGT TGTTTGCGTT GCATGAAACC 16797 || |||| | |||||||||| |||| ||||| |||||| | | |||| |||||||||| ACATTTCTCC TATCAACAGC GTCAAGGTTT TTGTCATGCT CGCCAACGTT GCATGAAACC 421 TTGAAACTTT GATTACGCCT TCCGTGGAGG AAAAGTTGAG AGGGTTTTGA TAACAAGGAT 16857 |||||||||| || ||||| ||| |||||| ||| |||||| |||||||||| ||| || | TTGAAACTTT GACAGCGCCT TCCATGGAGG AAAGGTTGAG AGGGTTTTGA TAAGAAAGTA 481 GAGTTGGTGG TGGTGAAGGA AGAAGAGAGG GATTTGTTGG TGCATAAAGG AAGAGTAGTA 16917 |||| | || ||||||||| |||||||||| |||||||||| || |||| | || |||| GAGTGGTTGT TGGTGAAGGG AGAAGAGAGG GATTTGTTGG TGGATAATAA AGGAAGAGTA 541 GTAATAGAAG AA 16929 || || || || TTAGGAGTAG AA 553 hqPGS_C08HBa0336I24.1+_SGN-E316163- (16381 16929) ******************************************************************************** EST sequence 237 -strand 544 n (File: SGN-E312364-) 1 AATAAGCACA ATGAATATTA GCTTGTTGTT TAAACCCAAG AGGGTCAAAA GGGTCTTTAT 61 CAAGTTCCCT CATTCGACTT GTAGCCAATT GATACTTGGC TACGTACTCC TCATCCGCCG 121 CATGAGCAGG GGGGCGGATG CGGAGTTTCG TCATAGGAGG GAACTTGTAG TACGGAACGC 181 TATCGATATC ATCAGGTACA GGAGGGCAAC AACTGTATGA GACTTCAGTA CCTTTATCAT 241 CTATATGGGC AACACCACAA GATTTGAGAT CAGGTGGTGG TATAGGAGCA GCAGAGGCTA 301 ATGGTGCAAG ATTAGCTGCA CCATAAAAAC CTCCTAACCC TAAAAGAACA TTTCTCCTAT 361 CAACAGCGTC AAGGTTTTTG TCATGCTCGC CAACGTTGCA TGAAACCTTG AAACTTTGAC 421 AGCGCCTTCC ATGGAGGAAA GGTTGAGAGG GTTTTGATAA GAAAGTAGAG TGGTTGTTGG 481 TGAAGGGAGA AGAGAGGGAT TTGTTGGCGG ATAATAAAGG AAGAGTATTA GGAGTAGAAG 541 AAGA Predicted gene structure (within gDNA segment 15784 to 19289): Exon 1 16394 16934 ( 541 n); cDNA 1 544 ( 544 n); score: 0.873 MATCH C08HBa0336I24.1+ SGN-E312364- 0.873 541 0.994 C PGS_C08HBa0336I24.1+_SGN-E312364- (16394 16934) Alignment (genomic DNA sequence = upper lines): AATAAGCACA ATGAATATTA GCTTGTTGTT TAAAGCCAAG AGGGTCAAAG GGGTCTTTAT 16453 |||||||||| |||||||||| |||||||||| |||| ||||| ||||||||| |||||||||| AATAAGCACA ATGAATATTA GCTTGTTGTT TAAACCCAAG AGGGTCAAAA GGGTCTTTAT 60 CAAGTTCCCT CATTCGACTC GTAGCCAATT GATACTTGGC TACGTACTCC TCATCCGCCG 16513 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGTTCCCT CATTCGACTT GTAGCCAATT GATACTTGGC TACGTACTCC TCATCCGCCG 120 CATGAGCAGG GGGGCGGATG CGGAGTTTAG TCATAGAAGG GAACTTGTAG TACGGAACAC 16573 |||||||||| |||||||||| |||||||| | |||||| ||| |||||||||| |||||||| | CATGAGCAGG GGGGCGGATG CGGAGTTTCG TCATAGGAGG GAACTTGTAG TACGGAACGC 180 TATCGATATC ATCGGGTACA GGAGGGCAAC AACTGTATAT TACATCAACA CC--T-TCTT 16630 |||||||||| ||| |||||| |||||||||| |||||||| || ||| | || | || | TATCGATATC ATCAGGTACA GGAGGGCAAC AACTGTATGA GACTTCAGTA CCTTTATCAT 240 TTACATGGGC AGTACCACAA GACTTGAGAT CAGGAGGTGG TATAGGTGCA GCAGTCGCTA 16690 || |||||| | ||||||| || ||||||| |||| ||||| |||||| ||| |||| |||| CTATATGGGC AACACCACAA GATTTGAGAT CAGGTGGTGG TATAGGAGCA GCAGAGGCTA 300 ATGGTGCAAG ATTAGCTGCA CCATAAAGAC CTCCTAACCC TAAAAGAACG TTTCGTCTAT 16750 |||||||||| |||||||||| ||||||| || |||||||||| ||||||||| |||| |||| ATGGTGCAAG ATTAGCTGCA CCATAAAAAC CTCCTAACCC TAAAAGAACA TTTCTCCTAT 360 CAACAGCGTC AGGGTTTTTG TCAACGTTGT TTGCGTTGCA TGAAACCTTG AAACTTTGAT 16810 |||||||||| | |||||||| ||| | | ||||||| |||||||||| ||||||||| CAACAGCGTC AAGGTTTTTG TCATGCTCGC CAACGTTGCA TGAAACCTTG AAACTTTGAC 420 TACGCCTTCC GTGGAGGAAA AGTTGAGAGG GTTTTGATAA CAAGGATGAG TTGGTGGTGG 16870 |||||||| ||||||||| ||||||||| |||||||||| || | ||| | | || ||| AGCGCCTTCC ATGGAGGAAA GGTTGAGAGG GTTTTGATAA GAAAGTAGAG TGGTTGTTGG 480 TGAAGGAAGA AGAGAGGGAT TTGTTGGTGC ATAAAGGAAG AGTAGTAGTA ATAGAAGAAG 16930 |||||| ||| |||||||||| ||||||| | |||| | | | |||| || || ||||| TGAAGGGAGA AGAGAGGGAT TTGTTGGCGG ATAATAAAGG AAGAGTATTA GGAGTAGAAG 540 AAGA 16934 |||| AAGA 544 hqPGS_C08HBa0336I24.1+_SGN-E312364- (16394 16934) ******************************************************************************** EST sequence 259 -strand 538 n (File: SGN-E324320-) 1 AATAAGCACA ATGAATATTA GCTTGTTGTT TAAACCCAAG AGGGTCAAAA GGGTCTTTAT 61 CAAGTTCCCT CATTCGACTT GTAGCCAATT GATACTTGGC TACGTACTCC TCATCCGCCG 121 CATGAGCAGG GGGGCGCATG CGGAGTTTCG TCATAGGAGG GAACTTGTAG TACGGAACGC 181 TATCGATATC ATCAGGTACA GGAGGGCAAC AACTGTATGA GACTTCAGTA CCTTTATCAT 241 CTATATGGGC AACACCACAA GATTTGAGAT CAGGTGGTGG TATAGGAGCA GCAGAGGCTA 301 ATGGTGCAAG ATTAGCTGCA CCATAAAAAC CTCCTAACCC TAAAAGAACA TTTCTCCTAT 361 CAACAGCGTC AAGGTTTTTG TCATGCTCGC CAACGTTGCA TGAAACCTTG AAACTTTGAC 421 AGCGCCTTCC ATGGAGGAAA GGTTGAGAGG GTTTTGATAA GAAAGTAGAG TGGTTGTTGG 481 TGAAGGGAGA AGAGAGGGAT TTGTTGGTGG ATAATAAAGG AAGAGTATTA GGAGTAGA Predicted gene structure (within gDNA segment 15784 to 19229): Exon 1 16394 16928 ( 535 n); cDNA 1 538 ( 538 n); score: 0.872 MATCH C08HBa0336I24.1+ SGN-E324320- 0.872 535 0.994 C PGS_C08HBa0336I24.1+_SGN-E324320- (16394 16928) Alignment (genomic DNA sequence = upper lines): AATAAGCACA ATGAATATTA GCTTGTTGTT TAAAGCCAAG AGGGTCAAAG GGGTCTTTAT 16453 |||||||||| |||||||||| |||||||||| |||| ||||| ||||||||| |||||||||| AATAAGCACA ATGAATATTA GCTTGTTGTT TAAACCCAAG AGGGTCAAAA GGGTCTTTAT 60 CAAGTTCCCT CATTCGACTC GTAGCCAATT GATACTTGGC TACGTACTCC TCATCCGCCG 16513 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGTTCCCT CATTCGACTT GTAGCCAATT GATACTTGGC TACGTACTCC TCATCCGCCG 120 CATGAGCAGG GGGGCGGATG CGGAGTTTAG TCATAGAAGG GAACTTGTAG TACGGAACAC 16573 |||||||||| |||||| ||| |||||||| | |||||| ||| |||||||||| |||||||| | CATGAGCAGG GGGGCGCATG CGGAGTTTCG TCATAGGAGG GAACTTGTAG TACGGAACGC 180 TATCGATATC ATCGGGTACA GGAGGGCAAC AACTGTATAT TACATCAACA CC--T-TCTT 16630 |||||||||| ||| |||||| |||||||||| |||||||| || ||| | || | || | TATCGATATC ATCAGGTACA GGAGGGCAAC AACTGTATGA GACTTCAGTA CCTTTATCAT 240 TTACATGGGC AGTACCACAA GACTTGAGAT CAGGAGGTGG TATAGGTGCA GCAGTCGCTA 16690 || |||||| | ||||||| || ||||||| |||| ||||| |||||| ||| |||| |||| CTATATGGGC AACACCACAA GATTTGAGAT CAGGTGGTGG TATAGGAGCA GCAGAGGCTA 300 ATGGTGCAAG ATTAGCTGCA CCATAAAGAC CTCCTAACCC TAAAAGAACG TTTCGTCTAT 16750 |||||||||| |||||||||| ||||||| || |||||||||| ||||||||| |||| |||| ATGGTGCAAG ATTAGCTGCA CCATAAAAAC CTCCTAACCC TAAAAGAACA TTTCTCCTAT 360 CAACAGCGTC AGGGTTTTTG TCAACGTTGT TTGCGTTGCA TGAAACCTTG AAACTTTGAT 16810 |||||||||| | |||||||| ||| | | ||||||| |||||||||| ||||||||| CAACAGCGTC AAGGTTTTTG TCATGCTCGC CAACGTTGCA TGAAACCTTG AAACTTTGAC 420 TACGCCTTCC GTGGAGGAAA AGTTGAGAGG GTTTTGATAA CAAGGATGAG TTGGTGGTGG 16870 |||||||| ||||||||| ||||||||| |||||||||| || | ||| | | || ||| AGCGCCTTCC ATGGAGGAAA GGTTGAGAGG GTTTTGATAA GAAAGTAGAG TGGTTGTTGG 480 TGAAGGAAGA AGAGAGGGAT TTGTTGGTGC ATAAAGGAAG AGTAGTAGTA ATAGAAGA 16928 |||||| ||| |||||||||| ||||||||| |||| | | | |||| || || ||| TGAAGGGAGA AGAGAGGGAT TTGTTGGTGG ATAATAAAGG AAGAGTATTA GGAGTAGA 538 hqPGS_C08HBa0336I24.1+_SGN-E324320- (16394 16928) ******************************************************************************** EST sequence 114 -strand 524 n (File: SGN-E203001-) 1 AATAAGCACA ATGAATATTA GCTTGTTGTT TAAACCCAAG AGGGTCAAAA GGGTCTTTAT 61 CAAGTTCCTT CATTCGACTT GTAGCCAATT GATACTTGGC TACGTACTCC TCATCCGCCG 121 CATGAGCAGG GGGGCGGATG CGGAGTTTCG TCATAGGAGG GAACTTGTAG TACGGAACGC 181 TATCGATATC ATCAGGTACA GGAGGGCAAC AACTGTATGA GACTTCAGTA CCTTTATCAT 241 CTATATGGGC AACACCACAA GATTTGAGAT CAGGTGGTGG TATAGGAGCA GCAGAGGCTA 301 ATGGTGCAAG ATTAGCTGCA CCATAAAAAC CTCCTAACCC TAAAAGAACA TTTCTCCTAT 361 CAACAGCGTC AAGGTTTTTG TCATGCTCGC CAACGTTGCA TGAAACCTTG AAACTTTGAC 421 AGCGCCTTCC ATGGAGGAAA GGTTGAGAGG GTTTTGATAA GAAAGTAGAG TGGTTGTTGG 481 TGAAGGGAGA AGAGAGGGAT TTGTTGGTGG ATAATAACTC GTGC Predicted gene structure (within gDNA segment 15784 to 19089): Exon 1 16394 16913 ( 520 n); cDNA 1 522 ( 522 n); score: 0.876 MATCH C08HBa0336I24.1+ SGN-E203001- 0.876 520 0.992 C PGS_C08HBa0336I24.1+_SGN-E203001- (16394 16913) Alignment (genomic DNA sequence = upper lines): AATAAGCACA ATGAATATTA GCTTGTTGTT TAAAGCCAAG AGGGTCAAAG GGGTCTTTAT 16453 |||||||||| |||||||||| |||||||||| |||| ||||| ||||||||| |||||||||| AATAAGCACA ATGAATATTA GCTTGTTGTT TAAACCCAAG AGGGTCAAAA GGGTCTTTAT 60 CAAGTTCCCT CATTCGACTC GTAGCCAATT GATACTTGGC TACGTACTCC TCATCCGCCG 16513 |||||||| | ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGTTCCTT CATTCGACTT GTAGCCAATT GATACTTGGC TACGTACTCC TCATCCGCCG 120 CATGAGCAGG GGGGCGGATG CGGAGTTTAG TCATAGAAGG GAACTTGTAG TACGGAACAC 16573 |||||||||| |||||||||| |||||||| | |||||| ||| |||||||||| |||||||| | CATGAGCAGG GGGGCGGATG CGGAGTTTCG TCATAGGAGG GAACTTGTAG TACGGAACGC 180 TATCGATATC ATCGGGTACA GGAGGGCAAC AACTGTATAT TACATCAACA CC--T-TCTT 16630 |||||||||| ||| |||||| |||||||||| |||||||| || ||| | || | || | TATCGATATC ATCAGGTACA GGAGGGCAAC AACTGTATGA GACTTCAGTA CCTTTATCAT 240 TTACATGGGC AGTACCACAA GACTTGAGAT CAGGAGGTGG TATAGGTGCA GCAGTCGCTA 16690 || |||||| | ||||||| || ||||||| |||| ||||| |||||| ||| |||| |||| CTATATGGGC AACACCACAA GATTTGAGAT CAGGTGGTGG TATAGGAGCA GCAGAGGCTA 300 ATGGTGCAAG ATTAGCTGCA CCATAAAGAC CTCCTAACCC TAAAAGAACG TTTCGTCTAT 16750 |||||||||| |||||||||| ||||||| || |||||||||| ||||||||| |||| |||| ATGGTGCAAG ATTAGCTGCA CCATAAAAAC CTCCTAACCC TAAAAGAACA TTTCTCCTAT 360 CAACAGCGTC AGGGTTTTTG TCAACGTTGT TTGCGTTGCA TGAAACCTTG AAACTTTGAT 16810 |||||||||| | |||||||| ||| | | ||||||| |||||||||| ||||||||| CAACAGCGTC AAGGTTTTTG TCATGCTCGC CAACGTTGCA TGAAACCTTG AAACTTTGAC 420 TACGCCTTCC GTGGAGGAAA AGTTGAGAGG GTTTTGATAA CAAGGATGAG TTGGTGGTGG 16870 |||||||| ||||||||| ||||||||| |||||||||| || | ||| | | || ||| AGCGCCTTCC ATGGAGGAAA GGTTGAGAGG GTTTTGATAA GAAAGTAGAG TGGTTGTTGG 480 TGAAGGAAGA AGAGAGGGAT TTGTTGGTGC ATAAAGGAAG AGT 16913 |||||| ||| |||||||||| ||||||||| || || | || TGAAGGGAGA AGAGAGGGAT TTGTTGGTGG AT-AATAACT CGT 522 hqPGS_C08HBa0336I24.1+_SGN-E203001- (16394 16913) ******************************************************************************** EST sequence 82 -strand 518 n (File: SGN-E326254-) 1 AATAAGCACA ATGAATATTA GCTTGTTGTT TAAACCCAAG AGGGTCAAAA GGGTCTTTAT 61 CAAGTTCCCT CATTCGACTT GTAGCCAATT GATACTTGGC TACGTACTCC TCATCCGCCG 121 CATGAGCAGG GGGGCGGATG CGGAGTTTCG TCATAGGAGG GAACTTGTAG TACGGAACGC 181 TATCGATATC ATCAGGTACA GGAGGGCAAC AACTGTATGA GACTTCAGTA CCTTTATCAT 241 CTATATGGGC AACACCACAA GATTTGAGAT CAGGTGGTGG TATAGGAGCA GCAGAGGCTA 301 ATGGTGCAAG ATTAGCTGCA CCATAAAAAC CTCCTAACCC TAAAAGAACA TTTCTCCTAT 361 CAACAGCGTC AAGGTTTTTG TCATGCTCGC CAACGTTGCA TGAAACCTTG AAACTTTGAC 421 AGCGCCTTCC ATGGAGGAAA GGTTGAGAGG GTTTTGATAA GAAAGTAGAG TGGTTGTTGG 481 TGAAGGGAGA AGAGAGGGAT TTGTTGGTGG ATAATAAA Predicted gene structure (within gDNA segment 15784 to 19029): Exon 1 16394 16904 ( 511 n); cDNA 1 514 ( 514 n); score: 0.887 MATCH C08HBa0336I24.1+ SGN-E326254- 0.887 511 0.986 C PGS_C08HBa0336I24.1+_SGN-E326254- (16394 16904) Alignment (genomic DNA sequence = upper lines): AATAAGCACA ATGAATATTA GCTTGTTGTT TAAAGCCAAG AGGGTCAAAG GGGTCTTTAT 16453 |||||||||| |||||||||| |||||||||| |||| ||||| ||||||||| |||||||||| AATAAGCACA ATGAATATTA GCTTGTTGTT TAAACCCAAG AGGGTCAAAA GGGTCTTTAT 60 CAAGTTCCCT CATTCGACTC GTAGCCAATT GATACTTGGC TACGTACTCC TCATCCGCCG 16513 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGTTCCCT CATTCGACTT GTAGCCAATT GATACTTGGC TACGTACTCC TCATCCGCCG 120 CATGAGCAGG GGGGCGGATG CGGAGTTTAG TCATAGAAGG GAACTTGTAG TACGGAACAC 16573 |||||||||| |||||||||| |||||||| | |||||| ||| |||||||||| |||||||| | CATGAGCAGG GGGGCGGATG CGGAGTTTCG TCATAGGAGG GAACTTGTAG TACGGAACGC 180 TATCGATATC ATCGGGTACA GGAGGGCAAC AACTGTATAT TACATCAACA CC--T-TCTT 16630 |||||||||| ||| |||||| |||||||||| |||||||| || ||| | || | || | TATCGATATC ATCAGGTACA GGAGGGCAAC AACTGTATGA GACTTCAGTA CCTTTATCAT 240 TTACATGGGC AGTACCACAA GACTTGAGAT CAGGAGGTGG TATAGGTGCA GCAGTCGCTA 16690 || |||||| | ||||||| || ||||||| |||| ||||| |||||| ||| |||| |||| CTATATGGGC AACACCACAA GATTTGAGAT CAGGTGGTGG TATAGGAGCA GCAGAGGCTA 300 ATGGTGCAAG ATTAGCTGCA CCATAAAGAC CTCCTAACCC TAAAAGAACG TTTCGTCTAT 16750 |||||||||| |||||||||| ||||||| || |||||||||| ||||||||| |||| |||| ATGGTGCAAG ATTAGCTGCA CCATAAAAAC CTCCTAACCC TAAAAGAACA TTTCTCCTAT 360 CAACAGCGTC AGGGTTTTTG TCAACGTTGT TTGCGTTGCA TGAAACCTTG AAACTTTGAT 16810 |||||||||| | |||||||| ||| | | ||||||| |||||||||| ||||||||| CAACAGCGTC AAGGTTTTTG TCATGCTCGC CAACGTTGCA TGAAACCTTG AAACTTTGAC 420 TACGCCTTCC GTGGAGGAAA AGTTGAGAGG GTTTTGATAA CAAGGATGAG TTGGTGGTGG 16870 |||||||| ||||||||| ||||||||| |||||||||| || | ||| | | || ||| AGCGCCTTCC ATGGAGGAAA GGTTGAGAGG GTTTTGATAA GAAAGTAGAG TGGTTGTTGG 480 TGAAGGAAGA AGAGAGGGAT TTGTTGGTGC ATAA 16904 |||||| ||| |||||||||| ||||||||| |||| TGAAGGGAGA AGAGAGGGAT TTGTTGGTGG ATAA 514 hqPGS_C08HBa0336I24.1+_SGN-E326254- (16394 16904) ******************************************************************************** EST sequence 343 -strand 540 n (File: SGN-E330100-) 1 TAAGCACAAT GAATATTAGC TTGTTGTTTA AACCCAAGAG GGTCAAAAGG GTCTTTATCA 61 AGTTCCCTCA TTCGACTTGT AGCCAATTGA TACTTGGCTA CGTACTCCTC ATCCGCCGCA 121 TGAGCAGGGG GGCGGATGCG GAGTTTCGTC ATAGGAGGGA ACTTGTAGTA CGGAACGCTA 181 TCGATATCAT CAGGTACAGG AGGGCAACAA CTGTATGAGA CTTCAGTACC TTTATCATCT 241 ATATGGGCAA CACCACAAGA TTTGAGATCA GGTGGTGGTA TAGGAGCAGC AGAGGCTAAT 301 GGTGCAAGAT TAGCTGCACC ATAAAAACCT CCTAACCCTA AAAGAACATT TCTCCTATCA 361 ACAGCGTCAA GGTTTTTGTC ATGCTCGCCA ACGTTGCATG AAACCTTGAA ACTTTGACAG 421 CGCCTTCCAT GGAGGAAAGG TTGAGAGGGT TTTGATAAGA AAGTAGAGTG GTTGTTGGTG 481 AAGGGAGAAG AGAGGGATTT GTTGGTGGAT AATAAAGGAA GAGTATTAGG AGTAGAAGAA Predicted gene structure (within gDNA segment 15786 to 19269): Exon 1 16396 16932 ( 537 n); cDNA 1 540 ( 540 n); score: 0.874 MATCH C08HBa0336I24.1+ SGN-E330100- 0.874 537 0.994 C PGS_C08HBa0336I24.1+_SGN-E330100- (16396 16932) Alignment (genomic DNA sequence = upper lines): TAAGCACAAT GAATATTAGC TTGTTGTTTA AAGCCAAGAG GGTCAAAGGG GTCTTTATCA 16455 |||||||||| |||||||||| |||||||||| || ||||||| ||||||| || |||||||||| TAAGCACAAT GAATATTAGC TTGTTGTTTA AACCCAAGAG GGTCAAAAGG GTCTTTATCA 60 AGTTCCCTCA TTCGACTCGT AGCCAATTGA TACTTGGCTA CGTACTCCTC ATCCGCCGCA 16515 |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| AGTTCCCTCA TTCGACTTGT AGCCAATTGA TACTTGGCTA CGTACTCCTC ATCCGCCGCA 120 TGAGCAGGGG GGCGGATGCG GAGTTTAGTC ATAGAAGGGA ACTTGTAGTA CGGAACACTA 16575 |||||||||| |||||||||| |||||| ||| |||| ||||| |||||||||| |||||| ||| TGAGCAGGGG GGCGGATGCG GAGTTTCGTC ATAGGAGGGA ACTTGTAGTA CGGAACGCTA 180 TCGATATCAT CGGGTACAGG AGGGCAACAA CTGTATATTA CATCAACACC --T-TCTTTT 16632 |||||||||| | |||||||| |||||||||| |||||| | | ||| ||| | || | | TCGATATCAT CAGGTACAGG AGGGCAACAA CTGTATGAGA CTTCAGTACC TTTATCATCT 240 ACATGGGCAG TACCACAAGA CTTGAGATCA GGAGGTGGTA TAGGTGCAGC AGTCGCTAAT 16692 | ||||||| ||||||||| ||||||||| || ||||||| |||| ||||| || |||||| ATATGGGCAA CACCACAAGA TTTGAGATCA GGTGGTGGTA TAGGAGCAGC AGAGGCTAAT 300 GGTGCAAGAT TAGCTGCACC ATAAAGACCT CCTAACCCTA AAAGAACGTT TCGTCTATCA 16752 |||||||||| |||||||||| ||||| |||| |||||||||| ||||||| || || |||||| GGTGCAAGAT TAGCTGCACC ATAAAAACCT CCTAACCCTA AAAGAACATT TCTCCTATCA 360 ACAGCGTCAG GGTTTTTGTC AACGTTGTTT GCGTTGCATG AAACCTTGAA ACTTTGATTA 16812 ||||||||| |||||||||| | | | ||||||||| |||||||||| ||||||| ACAGCGTCAA GGTTTTTGTC ATGCTCGCCA ACGTTGCATG AAACCTTGAA ACTTTGACAG 420 CGCCTTCCGT GGAGGAAAAG TTGAGAGGGT TTTGATAACA AGGATGAGTT GGTGGTGGTG 16872 |||||||| | |||||||| | |||||||||| |||||||| | | | |||| | || ||||| CGCCTTCCAT GGAGGAAAGG TTGAGAGGGT TTTGATAAGA AAGTAGAGTG GTTGTTGGTG 480 AAGGAAGAAG AGAGGGATTT GTTGGTGCAT AAAGGAAGAG TAGTAGTAAT AGAAGAAGAA 16932 |||| ||||| |||||||||| ||||||| || || | || |||| || || ||||||| AAGGGAGAAG AGAGGGATTT GTTGGTGGAT AATAAAGGAA GAGTATTAGG AGTAGAAGAA 540 hqPGS_C08HBa0336I24.1+_SGN-E330100- (16396 16932) ******************************************************************************** EST sequence 69 -strand 539 n (File: SGN-E313259-) 1 TAAGCACAAT GAATATTAGC TTGTTGTTTA AACCCAAGAG GGTCAAAAGG GTCTTTATCA 61 AGTTCCCTCA TTCGACTTGT AGCCAATTGA TACTTGGCTA CGTACTCCTC ATCCGCCGCA 121 TGAGCAGGGG GGCGGATGCG GAGTTTCGTC ATAGGAGGGA ACTTGTAGTA CGGAACGCTA 181 TCGATATCAT CAGGTACAGG AGGGCAACAA CTGTATGAGA CTTCAGTACC TTTATCATCT 241 ATATGGGCAA CACCACAAGA TTTGAGATCA GGTGGTGGTA TAGGAGCAGC AGAGGCTAAT 301 GGTGCAAGAT TAGCTGCACC ATAAAAACCT CCTAACCCTA AAAGAACATT TCTCCTATCA 361 ACAGCGTCAA GGTTTTTGTC ATGCTCGCCA ACGTTGCATG AAACCTTGAA ACTTTGACAG 421 CGCCTTCCAT GGAGGAAAGG TTGAGAGGGT TTTGATAAGA AAGTAGAGTG GTTGTTGGTG 481 AAGGGAGAAG AGAGGGATTT GTTGGTGGAT AATAAAGGAA GAGTATTAGG AGTAGAAGA Predicted gene structure (within gDNA segment 15786 to 19259): Exon 1 16396 16931 ( 536 n); cDNA 1 539 ( 539 n); score: 0.874 MATCH C08HBa0336I24.1+ SGN-E313259- 0.874 536 0.994 C PGS_C08HBa0336I24.1+_SGN-E313259- (16396 16931) Alignment (genomic DNA sequence = upper lines): TAAGCACAAT GAATATTAGC TTGTTGTTTA AAGCCAAGAG GGTCAAAGGG GTCTTTATCA 16455 |||||||||| |||||||||| |||||||||| || ||||||| ||||||| || |||||||||| TAAGCACAAT GAATATTAGC TTGTTGTTTA AACCCAAGAG GGTCAAAAGG GTCTTTATCA 60 AGTTCCCTCA TTCGACTCGT AGCCAATTGA TACTTGGCTA CGTACTCCTC ATCCGCCGCA 16515 |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| AGTTCCCTCA TTCGACTTGT AGCCAATTGA TACTTGGCTA CGTACTCCTC ATCCGCCGCA 120 TGAGCAGGGG GGCGGATGCG GAGTTTAGTC ATAGAAGGGA ACTTGTAGTA CGGAACACTA 16575 |||||||||| |||||||||| |||||| ||| |||| ||||| |||||||||| |||||| ||| TGAGCAGGGG GGCGGATGCG GAGTTTCGTC ATAGGAGGGA ACTTGTAGTA CGGAACGCTA 180 TCGATATCAT CGGGTACAGG AGGGCAACAA CTGTATATTA CATCAACACC --T-TCTTTT 16632 |||||||||| | |||||||| |||||||||| |||||| | | ||| ||| | || | | TCGATATCAT CAGGTACAGG AGGGCAACAA CTGTATGAGA CTTCAGTACC TTTATCATCT 240 ACATGGGCAG TACCACAAGA CTTGAGATCA GGAGGTGGTA TAGGTGCAGC AGTCGCTAAT 16692 | ||||||| ||||||||| ||||||||| || ||||||| |||| ||||| || |||||| ATATGGGCAA CACCACAAGA TTTGAGATCA GGTGGTGGTA TAGGAGCAGC AGAGGCTAAT 300 GGTGCAAGAT TAGCTGCACC ATAAAGACCT CCTAACCCTA AAAGAACGTT TCGTCTATCA 16752 |||||||||| |||||||||| ||||| |||| |||||||||| ||||||| || || |||||| GGTGCAAGAT TAGCTGCACC ATAAAAACCT CCTAACCCTA AAAGAACATT TCTCCTATCA 360 ACAGCGTCAG GGTTTTTGTC AACGTTGTTT GCGTTGCATG AAACCTTGAA ACTTTGATTA 16812 ||||||||| |||||||||| | | | ||||||||| |||||||||| ||||||| ACAGCGTCAA GGTTTTTGTC ATGCTCGCCA ACGTTGCATG AAACCTTGAA ACTTTGACAG 420 CGCCTTCCGT GGAGGAAAAG TTGAGAGGGT TTTGATAACA AGGATGAGTT GGTGGTGGTG 16872 |||||||| | |||||||| | |||||||||| |||||||| | | | |||| | || ||||| CGCCTTCCAT GGAGGAAAGG TTGAGAGGGT TTTGATAAGA AAGTAGAGTG GTTGTTGGTG 480 AAGGAAGAAG AGAGGGATTT GTTGGTGCAT AAAGGAAGAG TAGTAGTAAT AGAAGAAGA 16931 |||| ||||| |||||||||| ||||||| || || | || |||| || || |||||| AAGGGAGAAG AGAGGGATTT GTTGGTGGAT AATAAAGGAA GAGTATTAGG AGTAGAAGA 539 hqPGS_C08HBa0336I24.1+_SGN-E313259- (16396 16931) ******************************************************************************** EST sequence 263 -strand 539 n (File: SGN-E319697-) 1 AATGAATATT AGCTTGTTGT TTAAACCCAA GAGGGTCAAA AGGGTCTTTA TCAAGTTCCC 61 TCATTCGACT TGTAGCCAAT TGATACTTGG CTACGTACTC CTCATCCGCC GCATGAGCAG 121 GGGGGCGGAT GCGGAGTTTC GTCATAGGAG GGAACTTGTA GTACGGAACG CTATCGATAT 181 CATCAGGTAC AGGAGGGCAA CAACTGTATG AGACTTCAGT ACCTTTATCA TCTATATGGG 241 CAACACCACA AGATTTGAGA TCAGGTGGTG GTATAGGAGC AGCAGAGGCT AATGGTGCAA 301 GATTAGCTGC ACCATAAAAA CCTCCTAACC CTAAAAGAAC ATTTCTCCTA TCAACAGCGT 361 CAAGGTTTTT GTCATGCTCG CCAACGTTGC ATGAAACCTT GAAACTTTGA CAGCGCCTTC 421 CATGGAGGAA AGGTTGAGAG GGTTTTGATA AGAAAGTAGA GTGGTTGTTG GTGAAGGGAG 481 AAGAGAGGGA TTTGTTGGTG GATAATAAAG GAAGAGTATT AGGAGTAGAA GAAGACATT Predicted gene structure (within gDNA segment 15793 to 19329): Exon 1 16403 16941 ( 539 n); cDNA 1 539 ( 539 n); score: 0.877 MATCH C08HBa0336I24.1+ SGN-E319697- 0.877 539 1.000 C PGS_C08HBa0336I24.1+_SGN-E319697- (16403 16941) Alignment (genomic DNA sequence = upper lines): AATGAATATT AGCTTGTTGT TTAAAGCCAA GAGGGTCAAA GGGGTCTTTA TCAAGTTCCC 16462 |||||||||| |||||||||| ||||| |||| |||||||||| ||||||||| |||||||||| AATGAATATT AGCTTGTTGT TTAAACCCAA GAGGGTCAAA AGGGTCTTTA TCAAGTTCCC 60 TCATTCGACT CGTAGCCAAT TGATACTTGG CTACGTACTC CTCATCCGCC GCATGAGCAG 16522 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCATTCGACT TGTAGCCAAT TGATACTTGG CTACGTACTC CTCATCCGCC GCATGAGCAG 120 GGGGGCGGAT GCGGAGTTTA GTCATAGAAG GGAACTTGTA GTACGGAACA CTATCGATAT 16582 |||||||||| ||||||||| ||||||| || |||||||||| ||||||||| |||||||||| GGGGGCGGAT GCGGAGTTTC GTCATAGGAG GGAACTTGTA GTACGGAACG CTATCGATAT 180 CATCGGGTAC AGGAGGGCAA CAACTGTATA TTACATCAAC ACC--T-TCT TTTACATGGG 16639 |||| ||||| |||||||||| ||||||||| || ||| ||| | || | || ||||| CATCAGGTAC AGGAGGGCAA CAACTGTATG AGACTTCAGT ACCTTTATCA TCTATATGGG 240 CAGTACCACA AGACTTGAGA TCAGGAGGTG GTATAGGTGC AGCAGTCGCT AATGGTGCAA 16699 || |||||| ||| |||||| ||||| |||| ||||||| || ||||| ||| |||||||||| CAACACCACA AGATTTGAGA TCAGGTGGTG GTATAGGAGC AGCAGAGGCT AATGGTGCAA 300 GATTAGCTGC ACCATAAAGA CCTCCTAACC CTAAAAGAAC GTTTCGTCTA TCAACAGCGT 16759 |||||||||| |||||||| | |||||||||| |||||||||| |||| ||| |||||||||| GATTAGCTGC ACCATAAAAA CCTCCTAACC CTAAAAGAAC ATTTCTCCTA TCAACAGCGT 360 CAGGGTTTTT GTCAACGTTG TTTGCGTTGC ATGAAACCTT GAAACTTTGA TTACGCCTTC 16819 || ||||||| |||| | | |||||| |||||||||| |||||||||| ||||||| CAAGGTTTTT GTCATGCTCG CCAACGTTGC ATGAAACCTT GAAACTTTGA CAGCGCCTTC 420 CGTGGAGGAA AAGTTGAGAG GGTTTTGATA ACAAGGATGA GTTGGTGGTG GTGAAGGAAG 16879 | |||||||| | |||||||| |||||||||| | || | || || | || || ||||||| || CATGGAGGAA AGGTTGAGAG GGTTTTGATA AGAAAGTAGA GTGGTTGTTG GTGAAGGGAG 480 AAGAGAGGGA TTTGTTGGTG CATAAAGGAA GAGTAGTAGT AATAGAAGAA GAAGAAGACA 16939 |||||||||| |||||||||| || || || | | || ||| | ||| || | |||||||||| AAGAGAGGGA TTTGTTGGTG GAT-AATAAA G-GAAG-AGT ATTAGGAGTA GAAGAAGACA 537 TT 16941 || TT 539 hqPGS_C08HBa0336I24.1+_SGN-E319697- (16403 16941) ******************************************************************************** EST sequence 345 -strand 534 n (File: SGN-E347000-) 1 AATGAATATT AGCTTGTTGT TTAACCCAAG AGGGTCAAAA GGGTCTTTAT CAAGTTCCCT 61 CATTCGACTT GTAGCCAATT GATACTTGGC TACGTACTCC TCATCCGCCG CATGAGCAGG 121 GGGGCGGATG CGGAGTTTCG TCATAGGAGG GAACTTGTAG TACGGAACGC TATCGATATC 181 ATCAGGTACA GGAGGGCAAC AACTGTATGA GACTTCAGTA CCTTTATCAT CTATATGGGC 241 AACACCACAA GATTTGAGAT CAGGTGGTGG TATAGGAGCA GCAGAGGCTA ATGGTGCAAG 301 ATTAGCTGCA CCATAAAAAC CTCCTAACCC TAAAAGAACA TTTCTCCTAT CAACAGCGTC 361 AAGGTTTTTG TCATGCTCGC CAACGTTGCA TGAAACCTTG AAACTTTGAC AGCGCCTTCC 421 ATGGAGGAAA GGTTGAGAGG GTTTTGATAA GAAAGTAGAG TGGTTGTTGG TGAAGGGAGA 481 AGAGAGGGAT TTGTTGGTGG ATAATAAAGG AAGAGTATTA GGAGTAGAAG AAGA Predicted gene structure (within gDNA segment 15793 to 19289): Exon 1 16403 16934 ( 532 n); cDNA 1 534 ( 534 n); score: 0.871 MATCH C08HBa0336I24.1+ SGN-E347000- 0.871 532 0.996 C PGS_C08HBa0336I24.1+_SGN-E347000- (16403 16934) Alignment (genomic DNA sequence = upper lines): AATGAATATT AGCTTGTTGT TTAAAGCCAA GAGGGTCAAA GGGGTCTTTA TCAAGTTCCC 16462 |||||||||| |||||||||| || || |||| |||||||||| ||||||||| |||||||||| AATGAATATT AGCTTGTTGT TT-AACCCAA GAGGGTCAAA AGGGTCTTTA TCAAGTTCCC 59 TCATTCGACT CGTAGCCAAT TGATACTTGG CTACGTACTC CTCATCCGCC GCATGAGCAG 16522 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCATTCGACT TGTAGCCAAT TGATACTTGG CTACGTACTC CTCATCCGCC GCATGAGCAG 119 GGGGGCGGAT GCGGAGTTTA GTCATAGAAG GGAACTTGTA GTACGGAACA CTATCGATAT 16582 |||||||||| ||||||||| ||||||| || |||||||||| ||||||||| |||||||||| GGGGGCGGAT GCGGAGTTTC GTCATAGGAG GGAACTTGTA GTACGGAACG CTATCGATAT 179 CATCGGGTAC AGGAGGGCAA CAACTGTATA TTACATCAAC ACC--T-TCT TTTACATGGG 16639 |||| ||||| |||||||||| ||||||||| || ||| ||| | || | || ||||| CATCAGGTAC AGGAGGGCAA CAACTGTATG AGACTTCAGT ACCTTTATCA TCTATATGGG 239 CAGTACCACA AGACTTGAGA TCAGGAGGTG GTATAGGTGC AGCAGTCGCT AATGGTGCAA 16699 || |||||| ||| |||||| ||||| |||| ||||||| || ||||| ||| |||||||||| CAACACCACA AGATTTGAGA TCAGGTGGTG GTATAGGAGC AGCAGAGGCT AATGGTGCAA 299 GATTAGCTGC ACCATAAAGA CCTCCTAACC CTAAAAGAAC GTTTCGTCTA TCAACAGCGT 16759 |||||||||| |||||||| | |||||||||| |||||||||| |||| ||| |||||||||| GATTAGCTGC ACCATAAAAA CCTCCTAACC CTAAAAGAAC ATTTCTCCTA TCAACAGCGT 359 CAGGGTTTTT GTCAACGTTG TTTGCGTTGC ATGAAACCTT GAAACTTTGA TTACGCCTTC 16819 || ||||||| |||| | | |||||| |||||||||| |||||||||| ||||||| CAAGGTTTTT GTCATGCTCG CCAACGTTGC ATGAAACCTT GAAACTTTGA CAGCGCCTTC 419 CGTGGAGGAA AAGTTGAGAG GGTTTTGATA ACAAGGATGA GTTGGTGGTG GTGAAGGAAG 16879 | |||||||| | |||||||| |||||||||| | || | || || | || || ||||||| || CATGGAGGAA AGGTTGAGAG GGTTTTGATA AGAAAGTAGA GTGGTTGTTG GTGAAGGGAG 479 AAGAGAGGGA TTTGTTGGTG CATAAAGGAA GAGTAGTAGT AATAGAAGAA GAAGA 16934 |||||||||| |||||||||| |||| | || |||| | | || |||| ||||| AAGAGAGGGA TTTGTTGGTG GATAATAAAG GAAGAGTATT AGGAGTAGAA GAAGA 534 hqPGS_C08HBa0336I24.1+_SGN-E347000- (16403 16934) ******************************************************************************** EST sequence 249 -strand 533 n (File: SGN-E324204-) 1 AATGAATATT AGCTTGTTGT TTAAACCCAA GAGGGTCAAA AGGGTCTTTA TCAAGTTCCC 61 TCATTCGACT TGTAGCCAAT TGATACTTGG CTACGTACTC CTCATCCGCC GCATGAGCAG 121 GGGGGCGGAT GCGGAGTTTC GTCATAGGAG GGAACTTGTA GTACGGAACG CTATCGATAT 181 CATCAGGTAC AGGAGGGCAA CAACTGTATG AGACTTCAGT ACCTTTATCA TCTATATGGG 241 CAACACCACA AGATTTGAGA TCAGGTGGTG GTATAGGAGC AGCAGAGGCT AATGGTGCAA 301 GATTAGCTGC ACCATAAAAA CCTCCTAACC CTAAAAGAAC ATTTCTCCTA TCAACAGCGT 361 CAAGGTTTTT GTCATGCTCG CCAACGTTGC ATGAAACCTT GAAACTTTGA CAGCGCCTTC 421 CATGGAGGAA AGGTTGAGAG GGTTTTGATA AGAAAGTAGA GTGGTTGTTG GTGAAGGGAG 481 AAGAGAGGGA TTTGTTGGTG GATAATAAAG GAAGAGTATT AGGAGTAGAA GAA Predicted gene structure (within gDNA segment 15793 to 19269): Exon 1 16403 16932 ( 530 n); cDNA 1 533 ( 533 n); score: 0.873 MATCH C08HBa0336I24.1+ SGN-E324204- 0.873 530 0.994 C PGS_C08HBa0336I24.1+_SGN-E324204- (16403 16932) Alignment (genomic DNA sequence = upper lines): AATGAATATT AGCTTGTTGT TTAAAGCCAA GAGGGTCAAA GGGGTCTTTA TCAAGTTCCC 16462 |||||||||| |||||||||| ||||| |||| |||||||||| ||||||||| |||||||||| AATGAATATT AGCTTGTTGT TTAAACCCAA GAGGGTCAAA AGGGTCTTTA TCAAGTTCCC 60 TCATTCGACT CGTAGCCAAT TGATACTTGG CTACGTACTC CTCATCCGCC GCATGAGCAG 16522 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCATTCGACT TGTAGCCAAT TGATACTTGG CTACGTACTC CTCATCCGCC GCATGAGCAG 120 GGGGGCGGAT GCGGAGTTTA GTCATAGAAG GGAACTTGTA GTACGGAACA CTATCGATAT 16582 |||||||||| ||||||||| ||||||| || |||||||||| ||||||||| |||||||||| GGGGGCGGAT GCGGAGTTTC GTCATAGGAG GGAACTTGTA GTACGGAACG CTATCGATAT 180 CATCGGGTAC AGGAGGGCAA CAACTGTATA TTACATCAAC ACC--T-TCT TTTACATGGG 16639 |||| ||||| |||||||||| ||||||||| || ||| ||| | || | || ||||| CATCAGGTAC AGGAGGGCAA CAACTGTATG AGACTTCAGT ACCTTTATCA TCTATATGGG 240 CAGTACCACA AGACTTGAGA TCAGGAGGTG GTATAGGTGC AGCAGTCGCT AATGGTGCAA 16699 || |||||| ||| |||||| ||||| |||| ||||||| || ||||| ||| |||||||||| CAACACCACA AGATTTGAGA TCAGGTGGTG GTATAGGAGC AGCAGAGGCT AATGGTGCAA 300 GATTAGCTGC ACCATAAAGA CCTCCTAACC CTAAAAGAAC GTTTCGTCTA TCAACAGCGT 16759 |||||||||| |||||||| | |||||||||| |||||||||| |||| ||| |||||||||| GATTAGCTGC ACCATAAAAA CCTCCTAACC CTAAAAGAAC ATTTCTCCTA TCAACAGCGT 360 CAGGGTTTTT GTCAACGTTG TTTGCGTTGC ATGAAACCTT GAAACTTTGA TTACGCCTTC 16819 || ||||||| |||| | | |||||| |||||||||| |||||||||| ||||||| CAAGGTTTTT GTCATGCTCG CCAACGTTGC ATGAAACCTT GAAACTTTGA CAGCGCCTTC 420 CGTGGAGGAA AAGTTGAGAG GGTTTTGATA ACAAGGATGA GTTGGTGGTG GTGAAGGAAG 16879 | |||||||| | |||||||| |||||||||| | || | || || | || || ||||||| || CATGGAGGAA AGGTTGAGAG GGTTTTGATA AGAAAGTAGA GTGGTTGTTG GTGAAGGGAG 480 AAGAGAGGGA TTTGTTGGTG CATAAAGGAA GAGTAGTAGT AATAGAAGAA GAA 16932 |||||||||| |||||||||| |||| | || |||| | | || |||| ||| AAGAGAGGGA TTTGTTGGTG GATAATAAAG GAAGAGTATT AGGAGTAGAA GAA 533 hqPGS_C08HBa0336I24.1+_SGN-E324204- (16403 16932) ******************************************************************************** EST sequence 76 -strand 512 n (File: SGN-E330745-) 1 AATGAATATT AGCTTGTTGT TTAAACCCAA GAGGGTCAAA AGGGTCTTTA TCAAGTTCCC 61 TCATTCGACT TGTAGCCAAT TGATACTTGG CTACGTACTC CTCATCCGCC GCATGAGCAG 121 GGGGGCGGAT GCGGAGTTTC GTCATAGGAG GGAACTTGTA GTACGGAACG CTATCGATAT 181 CATCAGGTAC AGGAGGGCAA CAACTGTATG AGACTTCAGT ACCTTTATCA TCTATATGGG 241 CAACACCACA AGATTTGAGA TCAGGTGGTG GTATAGGAGC AGCAGAGGCT AATGGTGCAA 301 GATTAGCTGC ACCATAAAAA CCTCCTAACC CTAAAAGAAC ATTTCTCCTA TCAACAGCGT 361 CAAGGTTTTT GTCATGCTCG CCAACGTTGC ATGAAACCTT GAAACTTTGA CAGCGCCTTC 421 CATGGAGGAA AGGTTGAGAG GGTTTTGATA AGAAAGTAGA GTGGTTGTTG GTGAAGGGAG 481 AAGAGAGGGA TTTGTTGGTG GATAATAAAG GA Predicted gene structure (within gDNA segment 15793 to 19059): Exon 1 16403 16911 ( 509 n); cDNA 1 512 ( 512 n); score: 0.879 MATCH C08HBa0336I24.1+ SGN-E330745- 0.879 509 0.994 C PGS_C08HBa0336I24.1+_SGN-E330745- (16403 16911) Alignment (genomic DNA sequence = upper lines): AATGAATATT AGCTTGTTGT TTAAAGCCAA GAGGGTCAAA GGGGTCTTTA TCAAGTTCCC 16462 |||||||||| |||||||||| ||||| |||| |||||||||| ||||||||| |||||||||| AATGAATATT AGCTTGTTGT TTAAACCCAA GAGGGTCAAA AGGGTCTTTA TCAAGTTCCC 60 TCATTCGACT CGTAGCCAAT TGATACTTGG CTACGTACTC CTCATCCGCC GCATGAGCAG 16522 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCATTCGACT TGTAGCCAAT TGATACTTGG CTACGTACTC CTCATCCGCC GCATGAGCAG 120 GGGGGCGGAT GCGGAGTTTA GTCATAGAAG GGAACTTGTA GTACGGAACA CTATCGATAT 16582 |||||||||| ||||||||| ||||||| || |||||||||| ||||||||| |||||||||| GGGGGCGGAT GCGGAGTTTC GTCATAGGAG GGAACTTGTA GTACGGAACG CTATCGATAT 180 CATCGGGTAC AGGAGGGCAA CAACTGTATA TTACATCAAC ACC--T-TCT TTTACATGGG 16639 |||| ||||| |||||||||| ||||||||| || ||| ||| | || | || ||||| CATCAGGTAC AGGAGGGCAA CAACTGTATG AGACTTCAGT ACCTTTATCA TCTATATGGG 240 CAGTACCACA AGACTTGAGA TCAGGAGGTG GTATAGGTGC AGCAGTCGCT AATGGTGCAA 16699 || |||||| ||| |||||| ||||| |||| ||||||| || ||||| ||| |||||||||| CAACACCACA AGATTTGAGA TCAGGTGGTG GTATAGGAGC AGCAGAGGCT AATGGTGCAA 300 GATTAGCTGC ACCATAAAGA CCTCCTAACC CTAAAAGAAC GTTTCGTCTA TCAACAGCGT 16759 |||||||||| |||||||| | |||||||||| |||||||||| |||| ||| |||||||||| GATTAGCTGC ACCATAAAAA CCTCCTAACC CTAAAAGAAC ATTTCTCCTA TCAACAGCGT 360 CAGGGTTTTT GTCAACGTTG TTTGCGTTGC ATGAAACCTT GAAACTTTGA TTACGCCTTC 16819 || ||||||| |||| | | |||||| |||||||||| |||||||||| ||||||| CAAGGTTTTT GTCATGCTCG CCAACGTTGC ATGAAACCTT GAAACTTTGA CAGCGCCTTC 420 CGTGGAGGAA AAGTTGAGAG GGTTTTGATA ACAAGGATGA GTTGGTGGTG GTGAAGGAAG 16879 | |||||||| | |||||||| |||||||||| | || | || || | || || ||||||| || CATGGAGGAA AGGTTGAGAG GGTTTTGATA AGAAAGTAGA GTGGTTGTTG GTGAAGGGAG 480 AAGAGAGGGA TTTGTTGGTG CATAAAGGAA GA 16911 |||||||||| |||||||||| |||| | || AAGAGAGGGA TTTGTTGGTG GATAATAAAG GA 512 hqPGS_C08HBa0336I24.1+_SGN-E330745- (16403 16911) ******************************************************************************** EST sequence 185 -strand 458 n (File: SGN-E317244-) 1 AATGAATATT AGCTTGTGTT TTAACCCCAA GAGGGTCAAA AGGGTCTTTA TCAAGTTCCC 61 TCATTCGACT TGTAGCCAAT TGATACTTGG CTACGTACTC CTCATCCGCC GCATGAGCAG 121 GGGGGCGGAT GCGGAGTTTC GTCATAGGAG GGAACTTGTA GTACGGAACG CTATCGATAT 181 CATCAGGTAC AGGAGGGCAA CAACTGTATG AGACTTCAGT ACCTTTATCA TCTATATGGG 241 CAACACCACA AGATTTGAGA TCAGGTGGTG GTATAGGAGC AGCAGAGGCT AATGGTGCAA 301 GATTAGCTGC ACCATAAAAA CCTCCTAACC CTAAAAGAAC ATTTCTCCTA TCAACAGCGT 361 CAAGGTTTTT GTCATGCTCG CCAACGTTGC ATGAAACCTT GAAACTTTGA CAGCGCCTTC 421 CATGGAGGAA AGGTTGAGAG GGTTTTGATA AGAAAGTA Predicted gene structure (within gDNA segment 15424 to 18519): Exon 1 16403 16853 ( 451 n); cDNA 1 454 ( 454 n); score: 0.884 MATCH C08HBa0336I24.1+ SGN-E317244- 0.884 451 0.985 C PGS_C08HBa0336I24.1+_SGN-E317244- (16403 16853) Alignment (genomic DNA sequence = upper lines): AATGAATATT AGCTTGTTGT TTAAAGCCAA GAGGGTCAAA GGGGTCTTTA TCAAGTTCCC 16462 |||||||||| ||||||| | |||| |||| |||||||||| ||||||||| |||||||||| AATGAATATT AGCTTGTGTT TTAACCCCAA GAGGGTCAAA AGGGTCTTTA TCAAGTTCCC 60 TCATTCGACT CGTAGCCAAT TGATACTTGG CTACGTACTC CTCATCCGCC GCATGAGCAG 16522 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCATTCGACT TGTAGCCAAT TGATACTTGG CTACGTACTC CTCATCCGCC GCATGAGCAG 120 GGGGGCGGAT GCGGAGTTTA GTCATAGAAG GGAACTTGTA GTACGGAACA CTATCGATAT 16582 |||||||||| ||||||||| ||||||| || |||||||||| ||||||||| |||||||||| GGGGGCGGAT GCGGAGTTTC GTCATAGGAG GGAACTTGTA GTACGGAACG CTATCGATAT 180 CATCGGGTAC AGGAGGGCAA CAACTGTATA TTACATCAAC ACC--T-TCT TTTACATGGG 16639 |||| ||||| |||||||||| ||||||||| || ||| ||| | || | || ||||| CATCAGGTAC AGGAGGGCAA CAACTGTATG AGACTTCAGT ACCTTTATCA TCTATATGGG 240 CAGTACCACA AGACTTGAGA TCAGGAGGTG GTATAGGTGC AGCAGTCGCT AATGGTGCAA 16699 || |||||| ||| |||||| ||||| |||| ||||||| || ||||| ||| |||||||||| CAACACCACA AGATTTGAGA TCAGGTGGTG GTATAGGAGC AGCAGAGGCT AATGGTGCAA 300 GATTAGCTGC ACCATAAAGA CCTCCTAACC CTAAAAGAAC GTTTCGTCTA TCAACAGCGT 16759 |||||||||| |||||||| | |||||||||| |||||||||| |||| ||| |||||||||| GATTAGCTGC ACCATAAAAA CCTCCTAACC CTAAAAGAAC ATTTCTCCTA TCAACAGCGT 360 CAGGGTTTTT GTCAACGTTG TTTGCGTTGC ATGAAACCTT GAAACTTTGA TTACGCCTTC 16819 || ||||||| |||| | | |||||| |||||||||| |||||||||| ||||||| CAAGGTTTTT GTCATGCTCG CCAACGTTGC ATGAAACCTT GAAACTTTGA CAGCGCCTTC 420 CGTGGAGGAA AAGTTGAGAG GGTTTTGATA ACAA 16853 | |||||||| | |||||||| |||||||||| | || CATGGAGGAA AGGTTGAGAG GGTTTTGATA AGAA 454 hqPGS_C08HBa0336I24.1+_SGN-E317244- (16403 16853) ******************************************************************************** EST sequence 277 -strand 533 n (File: SGN-E321227-) 1 TGAATATTAG CTTGTTGTTT ANAGCCAAGA GGGTCAAAGG GGTCTTTATC AAGTTCCGTC 61 ATTCGACTCG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC ATGAGCAGGG 121 GGGCGGATGC GGAGTTTAGT CATAGAAGAG AACTTGTAGT ACGGAACACT ATCGATATCA 181 TCGGGTACAG GAGGGCAACA ACTGTATATT ACATCAACAC CTTCTTTTAC ATGGGCAGTA 241 CCACAAGACT TGAGATCAGG AGGTGGTATA GGTGCAGCAG TCGCTAATGG TGCAAGATTA 301 GCTGCACCAT AAAGACCTCC TAACCCTAAA AGAACGTTTC GTCTATCAAC AGCGTCAGGG 361 TTTTTGTCAA CGTTGTTTGC GTTGCATGAA ACCTTGAAAC TTTGATTACG CCTTCCGTGG 421 AGGAAAAGTT GAGAGGGTTT TGATAACAAG GATGAGTTGG TGGTGGTGAA GGAAGAAAAG 481 AGGCATTTGT TGGTGCATAA AGGAAGAGTA GTAGTAATAG AAGAAGAAGA AGA Predicted gene structure (within gDNA segment 15795 to 17537): Exon 1 16405 16937 ( 533 n); cDNA 1 533 ( 533 n); score: 0.991 MATCH C08HBa0336I24.1+ SGN-E321227- 0.991 533 1.000 C PGS_C08HBa0336I24.1+_SGN-E321227- (16405 16937) Alignment (genomic DNA sequence = upper lines): TGAATATTAG CTTGTTGTTT AAAGCCAAGA GGGTCAAAGG GGTCTTTATC AAGTTCCCTC 16464 |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| ||||||| || TGAATATTAG CTTGTTGTTT ANAGCCAAGA GGGTCAAAGG GGTCTTTATC AAGTTCCGTC 60 ATTCGACTCG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC ATGAGCAGGG 16524 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTCGACTCG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC ATGAGCAGGG 120 GGGCGGATGC GGAGTTTAGT CATAGAAGGG AACTTGTAGT ACGGAACACT ATCGATATCA 16584 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| GGGCGGATGC GGAGTTTAGT CATAGAAGAG AACTTGTAGT ACGGAACACT ATCGATATCA 180 TCGGGTACAG GAGGGCAACA ACTGTATATT ACATCAACAC CTTCTTTTAC ATGGGCAGTA 16644 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGGGTACAG GAGGGCAACA ACTGTATATT ACATCAACAC CTTCTTTTAC ATGGGCAGTA 240 CCACAAGACT TGAGATCAGG AGGTGGTATA GGTGCAGCAG TCGCTAATGG TGCAAGATTA 16704 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCACAAGACT TGAGATCAGG AGGTGGTATA GGTGCAGCAG TCGCTAATGG TGCAAGATTA 300 GCTGCACCAT AAAGACCTCC TAACCCTAAA AGAACGTTTC GTCTATCAAC AGCGTCAGGG 16764 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTGCACCAT AAAGACCTCC TAACCCTAAA AGAACGTTTC GTCTATCAAC AGCGTCAGGG 360 TTTTTGTCAA CGTTGTTTGC GTTGCATGAA ACCTTGAAAC TTTGATTACG CCTTCCGTGG 16824 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTTGTCAA CGTTGTTTGC GTTGCATGAA ACCTTGAAAC TTTGATTACG CCTTCCGTGG 420 AGGAAAAGTT GAGAGGGTTT TGATAACAAG GATGAGTTGG TGGTGGTGAA GGAAGAAGAG 16884 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || AGGAAAAGTT GAGAGGGTTT TGATAACAAG GATGAGTTGG TGGTGGTGAA GGAAGAAAAG 480 AGGGATTTGT TGGTGCATAA AGGAAGAGTA GTAGTAATAG AAGAAGAAGA AGA 16937 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| AGGCATTTGT TGGTGCATAA AGGAAGAGTA GTAGTAATAG AAGAAGAAGA AGA 533 hqPGS_C08HBa0336I24.1+_SGN-E321227- (16405 16937) ******************************************************************************** EST sequence 267 -strand 533 n (File: SGN-E324624-) 1 TGAATATTAG CTTGTTGTTT AAACCCAAGA GGGTCAAAAG GGTCTTTATC AAGTTCCCTC 61 ATTCGACTTG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC ATGAGCAGGG 121 GGGCGGATGC GGAGTTTCGT CATAGGAGGG AACTTGTAGT ACGGAACGCT ATCGATATCA 181 TCAGGTACAG GAGGGCAACA ACTGTATGAG ACTTCAGTAC CTTTATCATC TATATGGGCA 241 ACACCACAAG ATTTGAGATC AGGTGGTGGT ATAGGAGCAG CAGAGGCTAA TGGTGCAAGA 301 TTAGCTGCAC CATAAAAACC TCCTAACCCT AAAAGAACAT TTCTCCTATC AACAGCGTCA 361 AGGTTTTTGT CATGCTCGCC AACGTTGCAT GAAACCTTGA AACTTTGACA GCGCCTTCCA 421 TGGAGGAAAG GTTGAGAGGG TTTTGATAAG AAAGTAGAGT GGTTGTTGGT GAAGGCAGAA 481 GAGAGGCCTT TGTTGCTGGA TAATAAAGGA AGAGTATTAG GAGTAGAAGA AGA Predicted gene structure (within gDNA segment 15795 to 19289): Exon 1 16405 16934 ( 530 n); cDNA 1 533 ( 533 n); score: 0.867 MATCH C08HBa0336I24.1+ SGN-E324624- 0.867 530 0.994 C PGS_C08HBa0336I24.1+_SGN-E324624- (16405 16934) Alignment (genomic DNA sequence = upper lines): TGAATATTAG CTTGTTGTTT AAAGCCAAGA GGGTCAAAGG GGTCTTTATC AAGTTCCCTC 16464 |||||||||| |||||||||| ||| |||||| |||||||| | |||||||||| |||||||||| TGAATATTAG CTTGTTGTTT AAACCCAAGA GGGTCAAAAG GGTCTTTATC AAGTTCCCTC 60 ATTCGACTCG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC ATGAGCAGGG 16524 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTCGACTTG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC ATGAGCAGGG 120 GGGCGGATGC GGAGTTTAGT CATAGAAGGG AACTTGTAGT ACGGAACACT ATCGATATCA 16584 |||||||||| ||||||| || ||||| |||| |||||||||| ||||||| || |||||||||| GGGCGGATGC GGAGTTTCGT CATAGGAGGG AACTTGTAGT ACGGAACGCT ATCGATATCA 180 TCGGGTACAG GAGGGCAACA ACTGTATATT ACATCAACAC C--T-TCTTT TACATGGGCA 16641 || ||||||| |||||||||| ||||||| || ||| || | | || | || ||||||| TCAGGTACAG GAGGGCAACA ACTGTATGAG ACTTCAGTAC CTTTATCATC TATATGGGCA 240 GTACCACAAG ACTTGAGATC AGGAGGTGGT ATAGGTGCAG CAGTCGCTAA TGGTGCAAGA 16701 |||||||| | |||||||| ||| |||||| ||||| |||| ||| ||||| |||||||||| ACACCACAAG ATTTGAGATC AGGTGGTGGT ATAGGAGCAG CAGAGGCTAA TGGTGCAAGA 300 TTAGCTGCAC CATAAAGACC TCCTAACCCT AAAAGAACGT TTCGTCTATC AACAGCGTCA 16761 |||||||||| |||||| ||| |||||||||| |||||||| | ||| ||||| |||||||||| TTAGCTGCAC CATAAAAACC TCCTAACCCT AAAAGAACAT TTCTCCTATC AACAGCGTCA 360 GGGTTTTTGT CAACGTTGTT TGCGTTGCAT GAAACCTTGA AACTTTGATT ACGCCTTCCG 16821 ||||||||| || | | |||||||| |||||||||| |||||||| |||||||| AGGTTTTTGT CATGCTCGCC AACGTTGCAT GAAACCTTGA AACTTTGACA GCGCCTTCCA 420 TGGAGGAAAA GTTGAGAGGG TTTTGATAAC AAGGATGAGT TGGTGGTGGT GAAGGAAGAA 16881 ||||||||| |||||||||| ||||||||| || | |||| | || |||| ||||| |||| TGGAGGAAAG GTTGAGAGGG TTTTGATAAG AAAGTAGAGT GGTTGTTGGT GAAGGCAGAA 480 GAGAGGGATT TGTTGGTGCA TAAAGGAAGA GTAGTAGTAA TAGAAGAAGA AGA 16934 |||||| || ||||| || | ||| | || |||| || || |||||| ||| GAGAGGCCTT TGTTGCTGGA TAATAAAGGA AGAGTATTAG GAGTAGAAGA AGA 533 hqPGS_C08HBa0336I24.1+_SGN-E324624- (16405 16934) ******************************************************************************** EST sequence 251 -strand 528 n (File: SGN-E312738-) 1 TGAATATTAG CTTGTTGTTT AAACCCAAGA GGGTCAAAAG GGTCTTTATC AAGTTCCCTC 61 ATTCGACTTG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC ATGAGCAGGG 121 GGGCGGATGC GGAGTTTCGT CATAGGAGGG AACTTGTAGT ACGGAACGCT ATCGATATCA 181 TCAGGTACAG GAGGGCAACA ACTGTATGAG ACTTCAGTAC CTTTATCATC TATATGGGCA 241 ACACCACAAG ATTTGAGATC AGGTGGTGGT ATAGGAGCAG CAGAGGCTAA TGGTGCAAGA 301 TTAGCTGCAC CATAAAAACC TCCTAACCCT AAAAGAACAT TTCTCCTATC AACAGCGTCA 361 AGGTTTTTGT CATGCTCGCC AACGTTGCAT GAAACCTTGA AACTTTGACA GCGCCTTCCA 421 TGGAGGAAAG GTTGAGAGGG TTTTGATAAG AAAGTAGAGT GGTTGTTGGT GAAGGGAGAA 481 GAGAGGGATT TGTTGGTGGA TAATAAAGGA AGAGTATTAG GAGTAGAA Predicted gene structure (within gDNA segment 15795 to 19239): Exon 1 16405 16929 ( 525 n); cDNA 1 528 ( 528 n); score: 0.871 MATCH C08HBa0336I24.1+ SGN-E312738- 0.871 525 0.994 C PGS_C08HBa0336I24.1+_SGN-E312738- (16405 16929) Alignment (genomic DNA sequence = upper lines): TGAATATTAG CTTGTTGTTT AAAGCCAAGA GGGTCAAAGG GGTCTTTATC AAGTTCCCTC 16464 |||||||||| |||||||||| ||| |||||| |||||||| | |||||||||| |||||||||| TGAATATTAG CTTGTTGTTT AAACCCAAGA GGGTCAAAAG GGTCTTTATC AAGTTCCCTC 60 ATTCGACTCG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC ATGAGCAGGG 16524 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTCGACTTG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC ATGAGCAGGG 120 GGGCGGATGC GGAGTTTAGT CATAGAAGGG AACTTGTAGT ACGGAACACT ATCGATATCA 16584 |||||||||| ||||||| || ||||| |||| |||||||||| ||||||| || |||||||||| GGGCGGATGC GGAGTTTCGT CATAGGAGGG AACTTGTAGT ACGGAACGCT ATCGATATCA 180 TCGGGTACAG GAGGGCAACA ACTGTATATT ACATCAACAC C--T-TCTTT TACATGGGCA 16641 || ||||||| |||||||||| ||||||| || ||| || | | || | || ||||||| TCAGGTACAG GAGGGCAACA ACTGTATGAG ACTTCAGTAC CTTTATCATC TATATGGGCA 240 GTACCACAAG ACTTGAGATC AGGAGGTGGT ATAGGTGCAG CAGTCGCTAA TGGTGCAAGA 16701 |||||||| | |||||||| ||| |||||| ||||| |||| ||| ||||| |||||||||| ACACCACAAG ATTTGAGATC AGGTGGTGGT ATAGGAGCAG CAGAGGCTAA TGGTGCAAGA 300 TTAGCTGCAC CATAAAGACC TCCTAACCCT AAAAGAACGT TTCGTCTATC AACAGCGTCA 16761 |||||||||| |||||| ||| |||||||||| |||||||| | ||| ||||| |||||||||| TTAGCTGCAC CATAAAAACC TCCTAACCCT AAAAGAACAT TTCTCCTATC AACAGCGTCA 360 GGGTTTTTGT CAACGTTGTT TGCGTTGCAT GAAACCTTGA AACTTTGATT ACGCCTTCCG 16821 ||||||||| || | | |||||||| |||||||||| |||||||| |||||||| AGGTTTTTGT CATGCTCGCC AACGTTGCAT GAAACCTTGA AACTTTGACA GCGCCTTCCA 420 TGGAGGAAAA GTTGAGAGGG TTTTGATAAC AAGGATGAGT TGGTGGTGGT GAAGGAAGAA 16881 ||||||||| |||||||||| ||||||||| || | |||| | || |||| ||||| |||| TGGAGGAAAG GTTGAGAGGG TTTTGATAAG AAAGTAGAGT GGTTGTTGGT GAAGGGAGAA 480 GAGAGGGATT TGTTGGTGCA TAAAGGAAGA GTAGTAGTAA TAGAAGAA 16929 |||||||||| |||||||| | ||| | || |||| || || |||| GAGAGGGATT TGTTGGTGGA TAATAAAGGA AGAGTATTAG GAGTAGAA 528 hqPGS_C08HBa0336I24.1+_SGN-E312738- (16405 16929) ******************************************************************************** EST sequence 369 -strand 507 n (File: SGN-E313833-) 1 TGAATATTAG CTTGTTGTTT AAACCCAAGA GGGTCAAAAG GGTCTTTATC AAGTTCCCTC 61 ATTCGACTTG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC ATGAGCAGGG 121 GGGCGGATGC GGAGTTTCGT CATAGGAGGG AACTTGTAGT ACGGAACGCT ATCGATATCA 181 TCAGGTACAG GAGGGCAACA ACTGTATGAG ACTTCAGTAC CTTTATCATC TATATGGGCA 241 ACACCACAAG ATTTGAGATC AGGTGGTGGT ATAGGAGCAG CAGAGGCTAA TGGTGCAAGA 301 TTAGCTGCAC CATAAAAACC TCCTAACCCT AAAAGAACAT TTCTCCTATC AACAGCGTCA 361 AGGTTTTTGT CATGCTCGCC AACGTTGCAT GAAACCTTGA AACTTTGACA GCGCCTTCCA 421 TGGAGGAAAG GTTGAGAGGG TTTTGATAAG AAAGTAGAGT GGTTGTTGGT GCAGGGAGAA 481 GAGAGGGATT TGTTGGTGGA TAATAAA Predicted gene structure (within gDNA segment 15795 to 19029): Exon 1 16405 16904 ( 500 n); cDNA 1 503 ( 503 n); score: 0.883 MATCH C08HBa0336I24.1+ SGN-E313833- 0.883 500 0.986 C PGS_C08HBa0336I24.1+_SGN-E313833- (16405 16904) Alignment (genomic DNA sequence = upper lines): TGAATATTAG CTTGTTGTTT AAAGCCAAGA GGGTCAAAGG GGTCTTTATC AAGTTCCCTC 16464 |||||||||| |||||||||| ||| |||||| |||||||| | |||||||||| |||||||||| TGAATATTAG CTTGTTGTTT AAACCCAAGA GGGTCAAAAG GGTCTTTATC AAGTTCCCTC 60 ATTCGACTCG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC ATGAGCAGGG 16524 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTCGACTTG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC ATGAGCAGGG 120 GGGCGGATGC GGAGTTTAGT CATAGAAGGG AACTTGTAGT ACGGAACACT ATCGATATCA 16584 |||||||||| ||||||| || ||||| |||| |||||||||| ||||||| || |||||||||| GGGCGGATGC GGAGTTTCGT CATAGGAGGG AACTTGTAGT ACGGAACGCT ATCGATATCA 180 TCGGGTACAG GAGGGCAACA ACTGTATATT ACATCAACAC C--T-TCTTT TACATGGGCA 16641 || ||||||| |||||||||| ||||||| || ||| || | | || | || ||||||| TCAGGTACAG GAGGGCAACA ACTGTATGAG ACTTCAGTAC CTTTATCATC TATATGGGCA 240 GTACCACAAG ACTTGAGATC AGGAGGTGGT ATAGGTGCAG CAGTCGCTAA TGGTGCAAGA 16701 |||||||| | |||||||| ||| |||||| ||||| |||| ||| ||||| |||||||||| ACACCACAAG ATTTGAGATC AGGTGGTGGT ATAGGAGCAG CAGAGGCTAA TGGTGCAAGA 300 TTAGCTGCAC CATAAAGACC TCCTAACCCT AAAAGAACGT TTCGTCTATC AACAGCGTCA 16761 |||||||||| |||||| ||| |||||||||| |||||||| | ||| ||||| |||||||||| TTAGCTGCAC CATAAAAACC TCCTAACCCT AAAAGAACAT TTCTCCTATC AACAGCGTCA 360 GGGTTTTTGT CAACGTTGTT TGCGTTGCAT GAAACCTTGA AACTTTGATT ACGCCTTCCG 16821 ||||||||| || | | |||||||| |||||||||| |||||||| |||||||| AGGTTTTTGT CATGCTCGCC AACGTTGCAT GAAACCTTGA AACTTTGACA GCGCCTTCCA 420 TGGAGGAAAA GTTGAGAGGG TTTTGATAAC AAGGATGAGT TGGTGGTGGT GAAGGAAGAA 16881 ||||||||| |||||||||| ||||||||| || | |||| | || |||| | ||| |||| TGGAGGAAAG GTTGAGAGGG TTTTGATAAG AAAGTAGAGT GGTTGTTGGT GCAGGGAGAA 480 GAGAGGGATT TGTTGGTGCA TAA 16904 |||||||||| |||||||| | ||| GAGAGGGATT TGTTGGTGGA TAA 503 hqPGS_C08HBa0336I24.1+_SGN-E313833- (16405 16904) ******************************************************************************** EST sequence 84 -strand 497 n (File: SGN-E326256-) 1 TGAATATTAG CTTGTTGTTT AAACCCAAGA GGGTCAAAAG GGTCTTTATC AAGTTCCCTC 61 ATTCGACTTG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC ATGAGCAGGG 121 GGGCGGATGC GGAGTTTCGT CATAGGAGGG AACTTGTAGT ACGGAACGCT ATCGATATCA 181 TCAGGTACAG GAGGGCAACA ACTGTATGAG ACTTCAGTAC CTTTATCATC TATATGGGCA 241 ACACCACAAG ATTTGAGATC AGGTGGTGGT ATAGGAGCAG CAGAGGCTAA TGGTGCAAGA 301 TTAGCTGCAC CATAAAAACC TCCTAACCCT AAAAGAACAT TTCTCCTATC AACAGCGTCA 361 AGGTTTTTGT CATGCTCGCC AACGTTGCAT GAAACCTTGA AACTTTGACA GCGCCTTCCA 421 TGGAGGAAAG GTTGAGAGGG TTTTGATAAG AAAGTAGAGT GGTTGCTGGT GAAGGGAGAA 481 GAGAGGGATT TGTTGGT Predicted gene structure (within gDNA segment 15795 to 18929): Exon 1 16405 16898 ( 494 n); cDNA 1 497 ( 497 n); score: 0.886 MATCH C08HBa0336I24.1+ SGN-E326256- 0.886 494 0.994 C PGS_C08HBa0336I24.1+_SGN-E326256- (16405 16898) Alignment (genomic DNA sequence = upper lines): TGAATATTAG CTTGTTGTTT AAAGCCAAGA GGGTCAAAGG GGTCTTTATC AAGTTCCCTC 16464 |||||||||| |||||||||| ||| |||||| |||||||| | |||||||||| |||||||||| TGAATATTAG CTTGTTGTTT AAACCCAAGA GGGTCAAAAG GGTCTTTATC AAGTTCCCTC 60 ATTCGACTCG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC ATGAGCAGGG 16524 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTCGACTTG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC ATGAGCAGGG 120 GGGCGGATGC GGAGTTTAGT CATAGAAGGG AACTTGTAGT ACGGAACACT ATCGATATCA 16584 |||||||||| ||||||| || ||||| |||| |||||||||| ||||||| || |||||||||| GGGCGGATGC GGAGTTTCGT CATAGGAGGG AACTTGTAGT ACGGAACGCT ATCGATATCA 180 TCGGGTACAG GAGGGCAACA ACTGTATATT ACATCAACAC C--T-TCTTT TACATGGGCA 16641 || ||||||| |||||||||| ||||||| || ||| || | | || | || ||||||| TCAGGTACAG GAGGGCAACA ACTGTATGAG ACTTCAGTAC CTTTATCATC TATATGGGCA 240 GTACCACAAG ACTTGAGATC AGGAGGTGGT ATAGGTGCAG CAGTCGCTAA TGGTGCAAGA 16701 |||||||| | |||||||| ||| |||||| ||||| |||| ||| ||||| |||||||||| ACACCACAAG ATTTGAGATC AGGTGGTGGT ATAGGAGCAG CAGAGGCTAA TGGTGCAAGA 300 TTAGCTGCAC CATAAAGACC TCCTAACCCT AAAAGAACGT TTCGTCTATC AACAGCGTCA 16761 |||||||||| |||||| ||| |||||||||| |||||||| | ||| ||||| |||||||||| TTAGCTGCAC CATAAAAACC TCCTAACCCT AAAAGAACAT TTCTCCTATC AACAGCGTCA 360 GGGTTTTTGT CAACGTTGTT TGCGTTGCAT GAAACCTTGA AACTTTGATT ACGCCTTCCG 16821 ||||||||| || | | |||||||| |||||||||| |||||||| |||||||| AGGTTTTTGT CATGCTCGCC AACGTTGCAT GAAACCTTGA AACTTTGACA GCGCCTTCCA 420 TGGAGGAAAA GTTGAGAGGG TTTTGATAAC AAGGATGAGT TGGTGGTGGT GAAGGAAGAA 16881 ||||||||| |||||||||| ||||||||| || | |||| | || |||| ||||| |||| TGGAGGAAAG GTTGAGAGGG TTTTGATAAG AAAGTAGAGT GGTTGCTGGT GAAGGGAGAA 480 GAGAGGGATT TGTTGGT 16898 |||||||||| ||||||| GAGAGGGATT TGTTGGT 497 hqPGS_C08HBa0336I24.1+_SGN-E326256- (16405 16898) ******************************************************************************** EST sequence 257 -strand 528 n (File: SGN-E312803-) 1 ATTAGCTTGT TGTTTAAACC CAAGAGGGTC AAAAGGGTCT TTATCAAGTT CCCTCATTCG 61 ACTTGTAGCC AATTGATACT TGGCTACGTA CTCCTCATCC GCCGCATGAG CAGGGGGGCG 121 GATGGGGAGT TTCGTCATAG GAGGGAACTT GTAGTACGGA ACGCTATCGA TATCATCAGG 181 TACAGGAGGG CAACAACTGT ATGAGACTTC AGTACCTTTA TCATCTATAT GGGCAACGCC 241 ACAAGATTTG AGATCAGGTG GTGGTATAGG AGCAGCAGAG GCTAATGGTG CAAGATTAGC 301 TGCACCATAA AAACCTCCTA ACCCTAAAAG AACATTTCTC CTATCAACAG CGTCAAGGTT 361 TTTGTCATGC TCGCCAACGT TGCATGAAAC CTTGAAACTT TGACAGCGCC TTCCATGGAG 421 GAAAGGTTGA GAGGGTTTTG ATAAGAAAGT AGAGTGGTTG TTGGTGAAGG GAGAAGAGAG 481 CCATTTGCCG GTGGATAATA AAGGAAGAGT ATTAGGAGTA GAAGAAGA Predicted gene structure (within gDNA segment 15800 to 19289): Exon 1 16410 16934 ( 525 n); cDNA 1 528 ( 528 n); score: 0.860 MATCH C08HBa0336I24.1+ SGN-E312803- 0.860 525 0.994 C PGS_C08HBa0336I24.1+_SGN-E312803- (16410 16934) Alignment (genomic DNA sequence = upper lines): ATTAGCTTGT TGTTTAAAGC CAAGAGGGTC AAAGGGGTCT TTATCAAGTT CCCTCATTCG 16469 |||||||||| |||||||| | |||||||||| ||| |||||| |||||||||| |||||||||| ATTAGCTTGT TGTTTAAACC CAAGAGGGTC AAAAGGGTCT TTATCAAGTT CCCTCATTCG 60 ACTCGTAGCC AATTGATACT TGGCTACGTA CTCCTCATCC GCCGCATGAG CAGGGGGGCG 16529 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTGTAGCC AATTGATACT TGGCTACGTA CTCCTCATCC GCCGCATGAG CAGGGGGGCG 120 GATGCGGAGT TTAGTCATAG AAGGGAACTT GTAGTACGGA ACACTATCGA TATCATCGGG 16589 |||| ||||| || ||||||| ||||||||| |||||||||| || ||||||| ||||||| || GATGGGGAGT TTCGTCATAG GAGGGAACTT GTAGTACGGA ACGCTATCGA TATCATCAGG 180 TACAGGAGGG CAACAACTGT ATATTACATC AACACC--T- TCTTTTACAT GGGCAGTACC 16646 |||||||||| |||||||||| || || || | ||| | || | || || ||||| || TACAGGAGGG CAACAACTGT ATGAGACTTC AGTACCTTTA TCATCTATAT GGGCAACGCC 240 ACAAGACTTG AGATCAGGAG GTGGTATAGG TGCAGCAGTC GCTAATGGTG CAAGATTAGC 16706 |||||| ||| |||||||| | |||||||||| ||||||| |||||||||| |||||||||| ACAAGATTTG AGATCAGGTG GTGGTATAGG AGCAGCAGAG GCTAATGGTG CAAGATTAGC 300 TGCACCATAA AGACCTCCTA ACCCTAAAAG AACGTTTCGT CTATCAACAG CGTCAGGGTT 16766 |||||||||| | |||||||| |||||||||| ||| |||| |||||||||| ||||| |||| TGCACCATAA AAACCTCCTA ACCCTAAAAG AACATTTCTC CTATCAACAG CGTCAAGGTT 360 TTTGTCAACG TTGTTTGCGT TGCATGAAAC CTTGAAACTT TGATTACGCC TTCCGTGGAG 16826 ||||||| | | ||| |||||||||| |||||||||| ||| |||| |||| ||||| TTTGTCATGC TCGCCAACGT TGCATGAAAC CTTGAAACTT TGACAGCGCC TTCCATGGAG 420 GAAAAGTTGA GAGGGTTTTG ATAACAAGGA TGAGTTGGTG GTGGTGAAGG AAGAAGAGAG 16886 |||| ||||| |||||||||| |||| || | |||| | || ||||||||| ||||||||| GAAAGGTTGA GAGGGTTTTG ATAAGAAAGT AGAGTGGTTG TTGGTGAAGG GAGAAGAGAG 480 GGATTTGTTG GTGCATAAAG GAAGAGTAGT AGTAATAGAA GAAGAAGA 16934 ||||| | ||| |||| | || ||| | || || | |||||||| CCATTTGCCG GTGGATAATA AAGGAAGAGT ATTAGGAGTA GAAGAAGA 528 hqPGS_C08HBa0336I24.1+_SGN-E312803- (16410 16934) ******************************************************************************** EST sequence 74 -strand 505 n (File: SGN-E330622-) 1 ATTAGCTTGT TGTTTAAACC CAAGAGGGTC AACAGGGTCT TTATCAAGTT CCATCATTCG 61 ACTTGTAGCC AATTGATACT TGGCTACGTA CTCCTCATCC GCCGCATGAG CAGGGGGGCG 121 GATGCGGAGT TTCGTCATAG GAGGGAACTT GTAGTACGGA ACGCTATCGA TATCATCAGG 181 TACAGGAGGG CAACAGCTGT ATGAGACTTC AGTACCTTTA TCATATATAT GGGCAACACC 241 ACAAGATTTG AGATCAGGTG GTGGTATAGG AGCAGCAGAG GCTAATGGTG CAAGATTAGC 301 TGCACCATAA AAACCTCCTA ACCCTAAAAG AACATTTCTC CTATCAACAG CGTCAAGGTT 361 TTTGTCATGC TCGCCAACGT TGCATGAATC CTTGAAACTT TGACAGCGCC TTCCATGGAG 421 GAAAGGTTGA GAGGGTTTTG ATAAGAAAGT AGAGTGGTTG TCCGTGAAGG AAGAAGAGAG 481 GGATTTGTTG GTGGATAATA AAGGA Predicted gene structure (within gDNA segment 15800 to 19059): Exon 1 16410 16911 ( 502 n); cDNA 1 505 ( 505 n); score: 0.868 MATCH C08HBa0336I24.1+ SGN-E330622- 0.868 502 0.994 C PGS_C08HBa0336I24.1+_SGN-E330622- (16410 16911) Alignment (genomic DNA sequence = upper lines): ATTAGCTTGT TGTTTAAAGC CAAGAGGGTC AAAGGGGTCT TTATCAAGTT CCCTCATTCG 16469 |||||||||| |||||||| | |||||||||| || |||||| |||||||||| || ||||||| ATTAGCTTGT TGTTTAAACC CAAGAGGGTC AACAGGGTCT TTATCAAGTT CCATCATTCG 60 ACTCGTAGCC AATTGATACT TGGCTACGTA CTCCTCATCC GCCGCATGAG CAGGGGGGCG 16529 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTGTAGCC AATTGATACT TGGCTACGTA CTCCTCATCC GCCGCATGAG CAGGGGGGCG 120 GATGCGGAGT TTAGTCATAG AAGGGAACTT GTAGTACGGA ACACTATCGA TATCATCGGG 16589 |||||||||| || ||||||| ||||||||| |||||||||| || ||||||| ||||||| || GATGCGGAGT TTCGTCATAG GAGGGAACTT GTAGTACGGA ACGCTATCGA TATCATCAGG 180 TACAGGAGGG CAACAACTGT ATATTACATC AACACC--T- TCTTTTACAT GGGCAGTACC 16646 |||||||||| ||||| |||| || || || | ||| | || | || || ||||| ||| TACAGGAGGG CAACAGCTGT ATGAGACTTC AGTACCTTTA TCATATATAT GGGCAACACC 240 ACAAGACTTG AGATCAGGAG GTGGTATAGG TGCAGCAGTC GCTAATGGTG CAAGATTAGC 16706 |||||| ||| |||||||| | |||||||||| ||||||| |||||||||| |||||||||| ACAAGATTTG AGATCAGGTG GTGGTATAGG AGCAGCAGAG GCTAATGGTG CAAGATTAGC 300 TGCACCATAA AGACCTCCTA ACCCTAAAAG AACGTTTCGT CTATCAACAG CGTCAGGGTT 16766 |||||||||| | |||||||| |||||||||| ||| |||| |||||||||| ||||| |||| TGCACCATAA AAACCTCCTA ACCCTAAAAG AACATTTCTC CTATCAACAG CGTCAAGGTT 360 TTTGTCAACG TTGTTTGCGT TGCATGAAAC CTTGAAACTT TGATTACGCC TTCCGTGGAG 16826 ||||||| | | ||| |||||||| | |||||||||| ||| |||| |||| ||||| TTTGTCATGC TCGCCAACGT TGCATGAATC CTTGAAACTT TGACAGCGCC TTCCATGGAG 420 GAAAAGTTGA GAGGGTTTTG ATAACAAGGA TGAGTTGGTG GTGGTGAAGG AAGAAGAGAG 16886 |||| ||||| |||||||||| |||| || | |||| | || ||||||| |||||||||| GAAAGGTTGA GAGGGTTTTG ATAAGAAAGT AGAGTGGTTG TCCGTGAAGG AAGAAGAGAG 480 GGATTTGTTG GTGCATAAAG GAAGA 16911 |||||||||| ||| |||| | || GGATTTGTTG GTGGATAATA AAGGA 505 hqPGS_C08HBa0336I24.1+_SGN-E330622- (16410 16911) ******************************************************************************** EST sequence 204 -strand 522 n (File: SGN-E328761-) 1 GCTTGTTGTT AAAACCCAAG AGGGTCAAAA GGGTCTTTAT CAAGTTCCCT CATTCGACTT 61 GTAGCCAATT GATACTTGGA TACGTACTCC TCATCCGCCG CATGAGCAGG GGGGCGGATG 121 CGGAGTTTCG TCATAGGAGG GAACTTGTAG TACGGAACGC TATCGATATC ATCAGGTACA 181 GGAGGGCAAC ACCTGTATGA GACTTCAGTA CCTTTATCAT TTATATGGGC AACACCACAA 241 GATTTGAGAT CAGGTGGTGG TATAGGAGCA GCAGAGGTTA ATGGTGCAAG ATTAGCTGCA 301 CCATAAAAAC CTCATAACCC TAAAAGAACA TTTCTCCTAT CAACAGCGTC AAGGTTTTTG 361 TCATGCTCGC CAACGTTGCA TGAAACCTTG AAACTTTGAC AGCGCCTTCC ATGGAGGAAA 421 GGTTGAGAGG GTTTTGATAA GAAAGTAGAG TGGTTGTTGG TGAAGGGAGA AGAGAGGGAT 481 TTGTTGGTGG ATAATAAAGG AAGAGTATTA GGAGTAGAAG AA Predicted gene structure (within gDNA segment 15534 to 20514): Exon 1 16414 16932 ( 519 n); cDNA 1 522 ( 522 n); score: 0.862 MATCH C08HBa0336I24.1+ SGN-E328761- 0.862 519 0.994 C PGS_C08HBa0336I24.1+_SGN-E328761- (16414 16932) Alignment (genomic DNA sequence = upper lines): GCTTGTTGTT TAAAGCCAAG AGGGTCAAAG GGGTCTTTAT CAAGTTCCCT CATTCGACTC 16473 |||||||||| ||| ||||| ||||||||| |||||||||| |||||||||| ||||||||| GCTTGTTGTT AAAACCCAAG AGGGTCAAAA GGGTCTTTAT CAAGTTCCCT CATTCGACTT 60 GTAGCCAATT GATACTTGGC TACGTACTCC TCATCCGCCG CATGAGCAGG GGGGCGGATG 16533 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTAGCCAATT GATACTTGGA TACGTACTCC TCATCCGCCG CATGAGCAGG GGGGCGGATG 120 CGGAGTTTAG TCATAGAAGG GAACTTGTAG TACGGAACAC TATCGATATC ATCGGGTACA 16593 |||||||| | |||||| ||| |||||||||| |||||||| | |||||||||| ||| |||||| CGGAGTTTCG TCATAGGAGG GAACTTGTAG TACGGAACGC TATCGATATC ATCAGGTACA 180 GGAGGGCAAC AACTGTATAT TACATCAACA CC--T-TCTT TTACATGGGC AGTACCACAA 16650 |||||||||| | |||||| || ||| | || | || | ||| |||||| | ||||||| GGAGGGCAAC ACCTGTATGA GACTTCAGTA CCTTTATCAT TTATATGGGC AACACCACAA 240 GACTTGAGAT CAGGAGGTGG TATAGGTGCA GCAGTCGCTA ATGGTGCAAG ATTAGCTGCA 16710 || ||||||| |||| ||||| |||||| ||| |||| | || |||||||||| |||||||||| GATTTGAGAT CAGGTGGTGG TATAGGAGCA GCAGAGGTTA ATGGTGCAAG ATTAGCTGCA 300 CCATAAAGAC CTCCTAACCC TAAAAGAACG TTTCGTCTAT CAACAGCGTC AGGGTTTTTG 16770 ||||||| || ||| |||||| ||||||||| |||| |||| |||||||||| | |||||||| CCATAAAAAC CTCATAACCC TAAAAGAACA TTTCTCCTAT CAACAGCGTC AAGGTTTTTG 360 TCAACGTTGT TTGCGTTGCA TGAAACCTTG AAACTTTGAT TACGCCTTCC GTGGAGGAAA 16830 ||| | | ||||||| |||||||||| ||||||||| |||||||| ||||||||| TCATGCTCGC CAACGTTGCA TGAAACCTTG AAACTTTGAC AGCGCCTTCC ATGGAGGAAA 420 AGTTGAGAGG GTTTTGATAA CAAGGATGAG TTGGTGGTGG TGAAGGAAGA AGAGAGGGAT 16890 ||||||||| |||||||||| || | ||| | | || ||| |||||| ||| |||||||||| GGTTGAGAGG GTTTTGATAA GAAAGTAGAG TGGTTGTTGG TGAAGGGAGA AGAGAGGGAT 480 TTGTTGGTGC ATAAAGGAAG AGTAGTAGTA ATAGAAGAAG AA 16932 ||||||||| |||| | | | |||| || || ||||| || TTGTTGGTGG ATAATAAAGG AAGAGTATTA GGAGTAGAAG AA 522 hqPGS_C08HBa0336I24.1+_SGN-E328761- (16414 16932) ******************************************************************************** EST sequence 302 -strand 502 n (File: SGN-E320580-) 1 TGTTGTTTAA ACCCAAGAGG GTCAAACGGG TCTTTATCAA GTTCCCTCAT TCGACTGGTA 61 CCCAATTGAT AGTTGGATAN GTACTCCTCA TCCNCCGCAT GAGCAGGGGG GCGGATGCGG 121 ATTTTCTTCA TAGGAGGGAA CTTGTAGTAC GGAACGCTAT CGATATCATC AGTTACAGGA 181 GGGCAACAAC TGTATGAGAG TTCAGTACGT TTATCATATA TATGGGCAGC ACCACAAGAT 241 TTGAGATCAG GTGGTGGTAT AGGAGCAGCA GAGGTTAATG GTGCAAGATT AGCTGCACCA 301 TACAAAACCT CCTAACCATA AAAGAACATT TCTCTTATCA TCAGCGTCAA GGTTTTTGTC 361 ATGCTCGCCA ACGTTGCATG AAACCTTGCA ACTTTGTCAG CTCCTTCCAT GGAGGAAAGG 421 TTGAGAGGGT TTTGATAAGA AAGTAGAGTG GTTGTTGGTG AAGGGAGAAG AGAGGGATTT 481 GTTGGTGGAT AATAAAGGAA GA Predicted gene structure (within gDNA segment 14961 to 20281): Exon 1 16417 16911 ( 495 n); cDNA 1 499 ( 499 n); score: 0.838 MATCH C08HBa0336I24.1+ SGN-E320580- 0.838 495 0.986 C PGS_C08HBa0336I24.1+_SGN-E320580- (16417 16911) Alignment (genomic DNA sequence = upper lines): TGTTGTTTAA AGCCAAGAGG GTCAAAGGGG TCTTTATCAA GTTCCCTCAT TCGACTCGTA 16476 |||||||||| | |||||||| |||||| ||| |||||||||| |||||||||| |||||| ||| TGTTGTTTAA ACCCAAGAGG GTCAAACGGG TCTTTATCAA GTTCCCTCAT TCGACTGGTA 60 GCCAATTGAT ACTTGGCTAC GTACTCCTCA TCCGCCGCAT GAGCAGGGGG GCGGATGCGG 16536 ||||||||| | |||| || |||||||||| ||| |||||| |||||||||| |||||||||| CCCAATTGAT AGTTGGATAN GTACTCCTCA TCCNCCGCAT GAGCAGGGGG GCGGATGCGG 120 AGTTTAGTCA TAGAAGGGAA CTTGTAGTAC GGAACACTAT CGATATCATC GGGTACAGGA 16596 | ||| ||| ||| |||||| |||||||||| ||||| |||| |||||||||| | ||||||| ATTTTCTTCA TAGGAGGGAA CTTGTAGTAC GGAACGCTAT CGATATCATC AGTTACAGGA 180 GGGCAACAAC TGTATATTAC ATCA--ACAC CT-TCTTTTA CATGGGCAGT ACCACAAGAC 16653 |||||||||| ||||| | ||| || | || | || |||||||| ||||||||| GGGCAACAAC TGTATGAGAG TTCAGTACGT TTATCATATA TATGGGCAGC ACCACAAGAT 240 TTGAGATCAG GAGGTGGTAT AGGTGCAGCA GTCGCTAATG GTGCAAGATT AGCTGCACCA 16713 |||||||||| | |||||||| ||| |||||| | | ||||| |||||||||| |||||||||| TTGAGATCAG GTGGTGGTAT AGGAGCAGCA GAGGTTAATG GTGCAAGATT AGCTGCACCA 300 TA-AAGACCT CCTAACCCTA AAAGAACGTT TCGTCTATCA ACAGCGTCAG GGTTTTTGTC 16772 || || |||| ||||||| || ||||||| || || ||||| |||||||| |||||||||| TACAAAACCT CCTAACCATA AAAGAACATT TCTCTTATCA TCAGCGTCAA GGTTTTTGTC 360 AACGTTGTTT GCGTTGCATG AAACCTTGAA ACTTTGATTA CGCCTTCCGT GGAGGAAAAG 16832 | | | ||||||||| |||||||| | |||||| | |||||| | |||||||| | ATGCTCGCCA ACGTTGCATG AAACCTTGCA ACTTTGTCAG CTCCTTCCAT GGAGGAAAGG 420 TTGAGAGGGT TTTGATAACA AGGATGAGTT GGTGGTGGTG AAGGAAGAAG AGAGGGATTT 16892 |||||||||| |||||||| | | | |||| | || ||||| |||| ||||| |||||||||| TTGAGAGGGT TTTGATAAGA AAGTAGAGTG GTTGTTGGTG AAGGGAGAAG AGAGGGATTT 480 GTTGGTGCAT AAAGGAAGA 16911 ||||||| || || | || GTTGGTGGAT AATAAAGGA 499 hqPGS_C08HBa0336I24.1+_SGN-E320580- (16417 16911) ******************************************************************************** EST sequence 104 -strand 394 n (File: SGN-E202925-) 1 ACCCAAGAGG GTCAAAAGGG TCTTTATCAA GTTCCCTCAT TCGACTTGTA GCCAATTGAT 61 ACTTGGCTAC GTACTCCTCA TCCGCCGCAT GAGCAGGGGG GCGGATGCGG AGTTTCGTCA 121 TAGGAGGGAA CTTGTAGTAC GGAACGCTAT CGATATCATC AGGTACAGGA GGGCAACAAC 181 TGTATGAGAC TTCAGTACCT TTATCATCTA TATGGGCAAC ACCACAAGAT TTGAGATCAG 241 GTGGTGGTAT AGGAGCAGCA GAGGCTAATG GTGCAAGATT AGCTGCACCA TAAAAACCTC 301 CTAACCCTAA AAGAACATTT CTCCTATCAA CAGCGTCAAG GTTTTTGTCA TGCTCGCCAA 361 CGTTGCATGA AACCTTGAAA CTTTGACCTC GTGC Predicted gene structure (within gDNA segment 15664 to 18119): Exon 1 16429 16814 ( 386 n); cDNA 3 391 ( 389 n); score: 0.882 MATCH C08HBa0336I24.1+ SGN-E202925- 0.882 386 0.980 C PGS_C08HBa0336I24.1+_SGN-E202925- (16429 16814) Alignment (genomic DNA sequence = upper lines): CCAAGAGGGT CAAAGGGGTC TTTATCAAGT TCCCTCATTC GACTCGTAGC CAATTGATAC 16488 |||||||||| |||| ||||| |||||||||| |||||||||| |||| ||||| |||||||||| CCAAGAGGGT CAAAAGGGTC TTTATCAAGT TCCCTCATTC GACTTGTAGC CAATTGATAC 62 TTGGCTACGT ACTCCTCATC CGCCGCATGA GCAGGGGGGC GGATGCGGAG TTTAGTCATA 16548 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| TTGGCTACGT ACTCCTCATC CGCCGCATGA GCAGGGGGGC GGATGCGGAG TTTCGTCATA 122 GAAGGGAACT TGTAGTACGG AACACTATCG ATATCATCGG GTACAGGAGG GCAACAACTG 16608 | |||||||| |||||||||| ||| |||||| |||||||| | |||||||||| |||||||||| GGAGGGAACT TGTAGTACGG AACGCTATCG ATATCATCAG GTACAGGAGG GCAACAACTG 182 TATATTACAT CAACACC--T -TCTTTTACA TGGGCAGTAC CACAAGACTT GAGATCAGGA 16665 ||| || | || ||| | || | || | |||||| || ||||||| || ||||||||| TATGAGACTT CAGTACCTTT ATCATCTATA TGGGCAACAC CACAAGATTT GAGATCAGGT 242 GGTGGTATAG GTGCAGCAGT CGCTAATGGT GCAAGATTAG CTGCACCATA AAGACCTCCT 16725 |||||||||| | ||||||| ||||||||| |||||||||| |||||||||| || ||||||| GGTGGTATAG GAGCAGCAGA GGCTAATGGT GCAAGATTAG CTGCACCATA AAAACCTCCT 302 AACCCTAAAA GAACGTTTCG TCTATCAACA GCGTCAGGGT TTTTGTCAAC GTTGTTTGCG 16785 |||||||||| |||| |||| ||||||||| |||||| ||| |||||||| | | || AACCCTAAAA GAACATTTCT CCTATCAACA GCGTCAAGGT TTTTGTCATG CTCGCCAACG 362 TTGCATGAAA CCTTGAAACT TTGATTACG 16814 |||||||||| |||||||||| |||| || TTGCATGAAA CCTTGAAACT TTGACCTCG 391 hqPGS_C08HBa0336I24.1+_SGN-E202925- (16429 16814) ******************************************************************************** EST sequence 78 -strand 504 n (File: SGN-E325113-) 1 TCAAAAGGGT CTTTATCAAG TTCCCTCATT CGACTTGTAG CCAATTGATA CTGGGGGGCT 61 ACGGTACTCC TCATCCGCCG CATGAGCAGG GGGGCGGATG CGGAGTTTCG TCATAGGAGG 121 GAACTTGTAG TACGGAACGC TATCGATATC ATCAGGTACA GGAGGGCAAC AACTGTATGA 181 GACTTCAGTA CCTTTATCAT CTATATGGGC AACACCACAA GATTTGAGAT CAGGTGGTGG 241 TATAGGAGCA GCAGAGGCTA ATGGTGCAAG ATTAGCTGCA CCATAAAAAC CTCCTAACCC 301 TAAAAGAACA TTTCTCCTAT CAACAGCGTC AAGGTTTTTG TCATGCTCGC CAACGTTGCA 361 TGAAACCTTG AAACTTTGAC AGCGCCTTCC ATGGAGGAAA GGTTGAGAGG GTTTTGATAA 421 GAAAGTAGAG TGGTTGTTGG TGAAGGGAGA AGAGAGCCAT TTGCTGGTGG ATAATAAAGG 481 AAGAGTATTA GGAGTAGAAG AAGA Predicted gene structure (within gDNA segment 15774 to 19289): Exon 1 16438 16934 ( 497 n); cDNA 1 504 ( 504 n); score: 0.838 MATCH C08HBa0336I24.1+ SGN-E325113- 0.838 497 0.986 C PGS_C08HBa0336I24.1+_SGN-E325113- (16438 16934) Alignment (genomic DNA sequence = upper lines): TCAAAGGGGT CTTTATCAAG TTCCCTCATT CGACTCGTAG CCAATTGATA CT---TGGCT 16494 ||||| |||| |||||||||| |||||||||| ||||| |||| |||||||||| || |||| TCAAAAGGGT CTTTATCAAG TTCCCTCATT CGACTTGTAG CCAATTGATA CTGGGGGGCT 60 AC-GTACTCC TCATCCGCCG CATGAGCAGG GGGGCGGATG CGGAGTTTAG TCATAGAAGG 16553 || ||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||||| ||| ACGGTACTCC TCATCCGCCG CATGAGCAGG GGGGCGGATG CGGAGTTTCG TCATAGGAGG 120 GAACTTGTAG TACGGAACAC TATCGATATC ATCGGGTACA GGAGGGCAAC AACTGTATAT 16613 |||||||||| |||||||| | |||||||||| ||| |||||| |||||||||| |||||||| GAACTTGTAG TACGGAACGC TATCGATATC ATCAGGTACA GGAGGGCAAC AACTGTATGA 180 TACATCAACA CC--T-TCTT TTACATGGGC AGTACCACAA GACTTGAGAT CAGGAGGTGG 16670 || ||| | || | || | || |||||| | ||||||| || ||||||| |||| ||||| GACTTCAGTA CCTTTATCAT CTATATGGGC AACACCACAA GATTTGAGAT CAGGTGGTGG 240 TATAGGTGCA GCAGTCGCTA ATGGTGCAAG ATTAGCTGCA CCATAAAGAC CTCCTAACCC 16730 |||||| ||| |||| |||| |||||||||| |||||||||| ||||||| || |||||||||| TATAGGAGCA GCAGAGGCTA ATGGTGCAAG ATTAGCTGCA CCATAAAAAC CTCCTAACCC 300 TAAAAGAACG TTTCGTCTAT CAACAGCGTC AGGGTTTTTG TCAACGTTGT TTGCGTTGCA 16790 ||||||||| |||| |||| |||||||||| | |||||||| ||| | | ||||||| TAAAAGAACA TTTCTCCTAT CAACAGCGTC AAGGTTTTTG TCATGCTCGC CAACGTTGCA 360 TGAAACCTTG AAACTTTGAT TACGCCTTCC GTGGAGGAAA AGTTGAGAGG GTTTTGATAA 16850 |||||||||| ||||||||| |||||||| ||||||||| ||||||||| |||||||||| TGAAACCTTG AAACTTTGAC AGCGCCTTCC ATGGAGGAAA GGTTGAGAGG GTTTTGATAA 420 CAAGGATGAG TTGGTGGTGG TGAAGGAAGA AGAGAGGGAT TTGTTGGTGC ATAAAGGAAG 16910 || | ||| | | || ||| |||||| ||| |||||| || ||| ||||| |||| | | GAAAGTAGAG TGGTTGTTGG TGAAGGGAGA AGAGAGCCAT TTGCTGGTGG ATAATAAAGG 480 AGTAGTAGTA ATAGAAGAAG AAGA 16934 | |||| || || ||||| |||| AAGAGTATTA GGAGTAGAAG AAGA 504 hqPGS_C08HBa0336I24.1+_SGN-E325113- (16438 16934) ******************************************************************************** EST sequence 247 -strand 481 n (File: SGN-E324169-) 1 ATCAAGTTCC TTCATTCGAC TTGTAGCCAA TTGATACTTG GCTACGTACT CTTCATCCGC 61 CGCATGAGCA GGGGGGCGGA TGCGGAGTTT CGTCATAGGA GGGAACTTGT AGTACGGAAC 121 GCTATCGATA TCATCAGGTA CAGGAGGGCA ACAACTGTAT GAGACTTCAG TACCTTTATC 181 ATCTATATGG GCAACACCAC AAGATTTGAG ATCAGGTGGT GGTATAGGAG CAGCAGAGGC 241 TAATGGTGCA AGATTAGCTG CACCATAAAA ACCTCCTAAC CTTAAAAGAA CATTTCTCCT 301 ATCAACAGCG TCAAGGTTTT TGTCATGCTC GCCAACGTTG CATGAAACCT TGAAACTTTG 361 ACAGCGCTTT CCATGGAGGA AAGGTTGAGA GGGTTTTGAT AAGAAAGTAG AGTGGTTGTT 421 GGTGAAGGGA GAAGAGAGGG ATTTGTTGGT GGATAATAAA GGAAGAGTAT TAGGAGTAGA 481 A Predicted gene structure (within gDNA segment 15644 to 19437): Exon 1 16452 16929 ( 478 n); cDNA 1 481 ( 481 n); score: 0.855 MATCH C08HBa0336I24.1+ SGN-E324169- 0.855 478 0.994 C PGS_C08HBa0336I24.1+_SGN-E324169- (16452 16929) Alignment (genomic DNA sequence = upper lines): ATCAAGTTCC CTCATTCGAC TCGTAGCCAA TTGATACTTG GCTACGTACT CCTCATCCGC 16511 |||||||||| ||||||||| | |||||||| |||||||||| |||||||||| | |||||||| ATCAAGTTCC TTCATTCGAC TTGTAGCCAA TTGATACTTG GCTACGTACT CTTCATCCGC 60 CGCATGAGCA GGGGGGCGGA TGCGGAGTTT AGTCATAGAA GGGAACTTGT AGTACGGAAC 16571 |||||||||| |||||||||| |||||||||| ||||||| | |||||||||| |||||||||| CGCATGAGCA GGGGGGCGGA TGCGGAGTTT CGTCATAGGA GGGAACTTGT AGTACGGAAC 120 ACTATCGATA TCATCGGGTA CAGGAGGGCA ACAACTGTAT ATTACATCAA CACC--T-TC 16628 ||||||||| ||||| |||| |||||||||| |||||||||| || ||| ||| | || GCTATCGATA TCATCAGGTA CAGGAGGGCA ACAACTGTAT GAGACTTCAG TACCTTTATC 180 TTTTACATGG GCAGTACCAC AAGACTTGAG ATCAGGAGGT GGTATAGGTG CAGCAGTCGC 16688 | || |||| ||| ||||| |||| ||||| |||||| ||| |||||||| | |||||| || ATCTATATGG GCAACACCAC AAGATTTGAG ATCAGGTGGT GGTATAGGAG CAGCAGAGGC 240 TAATGGTGCA AGATTAGCTG CACCATAAAG ACCTCCTAAC CCTAAAAGAA CGTTTCGTCT 16748 |||||||||| |||||||||| ||||||||| |||||||||| | |||||||| | |||| || TAATGGTGCA AGATTAGCTG CACCATAAAA ACCTCCTAAC CTTAAAAGAA CATTTCTCCT 300 ATCAACAGCG TCAGGGTTTT TGTCAACGTT GTTTGCGTTG CATGAAACCT TGAAACTTTG 16808 |||||||||| ||| |||||| ||||| | | ||||| |||||||||| |||||||||| ATCAACAGCG TCAAGGTTTT TGTCATGCTC GCCAACGTTG CATGAAACCT TGAAACTTTG 360 ATTACGCCTT CCGTGGAGGA AAAGTTGAGA GGGTTTTGAT AACAAGGATG AGTTGGTGGT 16868 | ||| || || ||||||| || ||||||| |||||||||| || || | | ||| | || | ACAGCGCTTT CCATGGAGGA AAGGTTGAGA GGGTTTTGAT AAGAAAGTAG AGTGGTTGTT 420 GGTGAAGGAA GAAGAGAGGG ATTTGTTGGT GCATAAAGGA AGAGTAGTAG TAATAGAAGA 16928 |||||||| | |||||||||| |||||||||| | |||| | || |||| || || ||| GGTGAAGGGA GAAGAGAGGG ATTTGTTGGT GGATAATAAA GGAAGAGTAT TAGGAGTAGA 480 A 16929 | A 481 hqPGS_C08HBa0336I24.1+_SGN-E324169- (16452 16929) ******************************************************************************** EST sequence 360 -strand 460 n (File: SGN-E311881-) 1 ATCAAGTTCC CTCATTCGAC TTGTAGCCAA TTGATACTTG GCTACGTACT CCTCATCCGC 61 CGCATGAGCA GGGGGGCGGA TGCGGAGTTT CGTCATAGGA GGGAACTTGT AGTACGGAAC 121 GCTATCGATA TCATCAGGTA CAGGAGGGCA ACAACTGTAT GAGACTTCAG TACCTTTATC 181 ATCTATATGG GCAACACCAC AAGATTTGAG ATCAGGTGGT GGTATAGGAG CAGCAGAGGC 241 TAATGGTGCA AGATTAGCTG CACCATAAAA ACCTCCTAAC CCTAAAAGAA CATTTCTCCT 301 ATCAACAGCG TCAAGGTTTT TGTCATGCTC GCCAACGTTG CATGAAACCT TGAAACTTTG 361 ACAGCGCCTT CCATGGAGGA AAGGTTGAGA GGGTTTTGAT AAGAAAGTAG AGTGGTTGTT 421 GGTGAAGGGA GAAGAGAGGG ATTTGTTGGT GGATAATAAA Predicted gene structure (within gDNA segment 15842 to 19029): Exon 1 16452 16904 ( 453 n); cDNA 1 456 ( 456 n); score: 0.877 MATCH C08HBa0336I24.1+ SGN-E311881- 0.877 453 0.985 C PGS_C08HBa0336I24.1+_SGN-E311881- (16452 16904) Alignment (genomic DNA sequence = upper lines): ATCAAGTTCC CTCATTCGAC TCGTAGCCAA TTGATACTTG GCTACGTACT CCTCATCCGC 16511 |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| ATCAAGTTCC CTCATTCGAC TTGTAGCCAA TTGATACTTG GCTACGTACT CCTCATCCGC 60 CGCATGAGCA GGGGGGCGGA TGCGGAGTTT AGTCATAGAA GGGAACTTGT AGTACGGAAC 16571 |||||||||| |||||||||| |||||||||| ||||||| | |||||||||| |||||||||| CGCATGAGCA GGGGGGCGGA TGCGGAGTTT CGTCATAGGA GGGAACTTGT AGTACGGAAC 120 ACTATCGATA TCATCGGGTA CAGGAGGGCA ACAACTGTAT ATTACATCAA CACC--T-TC 16628 ||||||||| ||||| |||| |||||||||| |||||||||| || ||| ||| | || GCTATCGATA TCATCAGGTA CAGGAGGGCA ACAACTGTAT GAGACTTCAG TACCTTTATC 180 TTTTACATGG GCAGTACCAC AAGACTTGAG ATCAGGAGGT GGTATAGGTG CAGCAGTCGC 16688 | || |||| ||| ||||| |||| ||||| |||||| ||| |||||||| | |||||| || ATCTATATGG GCAACACCAC AAGATTTGAG ATCAGGTGGT GGTATAGGAG CAGCAGAGGC 240 TAATGGTGCA AGATTAGCTG CACCATAAAG ACCTCCTAAC CCTAAAAGAA CGTTTCGTCT 16748 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| | |||| || TAATGGTGCA AGATTAGCTG CACCATAAAA ACCTCCTAAC CCTAAAAGAA CATTTCTCCT 300 ATCAACAGCG TCAGGGTTTT TGTCAACGTT GTTTGCGTTG CATGAAACCT TGAAACTTTG 16808 |||||||||| ||| |||||| ||||| | | ||||| |||||||||| |||||||||| ATCAACAGCG TCAAGGTTTT TGTCATGCTC GCCAACGTTG CATGAAACCT TGAAACTTTG 360 ATTACGCCTT CCGTGGAGGA AAAGTTGAGA GGGTTTTGAT AACAAGGATG AGTTGGTGGT 16868 | |||||| || ||||||| || ||||||| |||||||||| || || | | ||| | || | ACAGCGCCTT CCATGGAGGA AAGGTTGAGA GGGTTTTGAT AAGAAAGTAG AGTGGTTGTT 420 GGTGAAGGAA GAAGAGAGGG ATTTGTTGGT GCATAA 16904 |||||||| | |||||||||| |||||||||| | |||| GGTGAAGGGA GAAGAGAGGG ATTTGTTGGT GGATAA 456 hqPGS_C08HBa0336I24.1+_SGN-E311881- (16452 16904) ******************************************************************************** EST sequence 224 -strand 452 n (File: SGN-E323529-) 1 ATCAAGTTCC CTCATTCGAC TTGTAGCCAA TTGATACTTG GCTACGTACT CCTCATCCGC 61 CGCATGAGCA GGGGGGCGGA TGCGGAGTTT CGTCATAGGA GGGAACTTGT AGTACGGAAC 121 GCTATCGATA TCATCAGGTA CAGGAGGGCA ACAACTGTAT GAGACTTCAG TACCTTTATC 181 ATCTATATGG GCAACACCAC AAGATTTGAG ATCAGGTGGT GGTATAGGAG CAGCAGAGGC 241 TAATGGTGCA AGATTAGCTG CACCATAAAA ACCTCCTAAC CCTAAAAGAA CATTTCTCCT 301 ATCAACAGCG TCAAGGTTTT TGTCATGCTC GCCAACGTTG CATGAAACCT TGAAACTTTG 361 ACAGCGCCTT CCATGGAGGA AAGGTTGAGA GGGTTTTGAT AAGAAAGTAG AGTGGTTGTT 421 GGTGAAGGGA GAAGAGAGGG ATTTGTTGGT GG Predicted gene structure (within gDNA segment 15842 to 18949): Exon 1 16452 16899 ( 448 n); cDNA 1 451 ( 451 n); score: 0.878 MATCH C08HBa0336I24.1+ SGN-E323529- 0.878 448 0.991 C PGS_C08HBa0336I24.1+_SGN-E323529- (16452 16899) Alignment (genomic DNA sequence = upper lines): ATCAAGTTCC CTCATTCGAC TCGTAGCCAA TTGATACTTG GCTACGTACT CCTCATCCGC 16511 |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| ATCAAGTTCC CTCATTCGAC TTGTAGCCAA TTGATACTTG GCTACGTACT CCTCATCCGC 60 CGCATGAGCA GGGGGGCGGA TGCGGAGTTT AGTCATAGAA GGGAACTTGT AGTACGGAAC 16571 |||||||||| |||||||||| |||||||||| ||||||| | |||||||||| |||||||||| CGCATGAGCA GGGGGGCGGA TGCGGAGTTT CGTCATAGGA GGGAACTTGT AGTACGGAAC 120 ACTATCGATA TCATCGGGTA CAGGAGGGCA ACAACTGTAT ATTACATCAA CACC--T-TC 16628 ||||||||| ||||| |||| |||||||||| |||||||||| || ||| ||| | || GCTATCGATA TCATCAGGTA CAGGAGGGCA ACAACTGTAT GAGACTTCAG TACCTTTATC 180 TTTTACATGG GCAGTACCAC AAGACTTGAG ATCAGGAGGT GGTATAGGTG CAGCAGTCGC 16688 | || |||| ||| ||||| |||| ||||| |||||| ||| |||||||| | |||||| || ATCTATATGG GCAACACCAC AAGATTTGAG ATCAGGTGGT GGTATAGGAG CAGCAGAGGC 240 TAATGGTGCA AGATTAGCTG CACCATAAAG ACCTCCTAAC CCTAAAAGAA CGTTTCGTCT 16748 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| | |||| || TAATGGTGCA AGATTAGCTG CACCATAAAA ACCTCCTAAC CCTAAAAGAA CATTTCTCCT 300 ATCAACAGCG TCAGGGTTTT TGTCAACGTT GTTTGCGTTG CATGAAACCT TGAAACTTTG 16808 |||||||||| ||| |||||| ||||| | | ||||| |||||||||| |||||||||| ATCAACAGCG TCAAGGTTTT TGTCATGCTC GCCAACGTTG CATGAAACCT TGAAACTTTG 360 ATTACGCCTT CCGTGGAGGA AAAGTTGAGA GGGTTTTGAT AACAAGGATG AGTTGGTGGT 16868 | |||||| || ||||||| || ||||||| |||||||||| || || | | ||| | || | ACAGCGCCTT CCATGGAGGA AAGGTTGAGA GGGTTTTGAT AAGAAAGTAG AGTGGTTGTT 420 GGTGAAGGAA GAAGAGAGGG ATTTGTTGGT G 16899 |||||||| | |||||||||| |||||||||| | GGTGAAGGGA GAAGAGAGGG ATTTGTTGGT G 451 hqPGS_C08HBa0336I24.1+_SGN-E323529- (16452 16899) ******************************************************************************** EST sequence 367 -strand 474 n (File: SGN-E313751-) 1 CATTCGACTT GTAGCCAATT GATACTTGGC TACGTACTCC TCATCCGCCG CATGAGCAGG 61 GGGGCGGATG CGGAGTTTCG TCATAGGAGG GAACTTGTAG TACGGAACGC TATCGATATC 121 ATCAGGTACA GGAGGGCAAC AACTGTATGA GACTTCAGTA CCTTTATCAT CTATATGGGC 181 AACACCACAA GATTTGAGAT CAGGTGGTGG TATAGGAGCA GCAGAGGCTA ATGGTGCAAG 241 ATTAGCTGCA CCATAAAAAC CTCCTAACCC TAAAAGAACA TTTCTCCTAT CAACAGCGTC 301 AAGGTTTTTG TCATGCTCGC CAACGTTGCA TGAAACCTTG AAACTTTGAC AGCGCCTTCC 361 ATGGAGGAAA GGTTGAGAGG GTTTTGATAA GAAAGTAGAG TGGTTGTTGG TGAAGGGAGA 421 AGAGAGGGAT TTGTTGGTGG ATAATAAAGG AAGAGTATTA GGAGTAGAAG AAGA Predicted gene structure (within gDNA segment 15764 to 19289): Exon 1 16464 16934 ( 471 n); cDNA 1 474 ( 474 n); score: 0.861 MATCH C08HBa0336I24.1+ SGN-E313751- 0.861 471 0.994 C PGS_C08HBa0336I24.1+_SGN-E313751- (16464 16934) Alignment (genomic DNA sequence = upper lines): CATTCGACTC GTAGCCAATT GATACTTGGC TACGTACTCC TCATCCGCCG CATGAGCAGG 16523 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTCGACTT GTAGCCAATT GATACTTGGC TACGTACTCC TCATCCGCCG CATGAGCAGG 60 GGGGCGGATG CGGAGTTTAG TCATAGAAGG GAACTTGTAG TACGGAACAC TATCGATATC 16583 |||||||||| |||||||| | |||||| ||| |||||||||| |||||||| | |||||||||| GGGGCGGATG CGGAGTTTCG TCATAGGAGG GAACTTGTAG TACGGAACGC TATCGATATC 120 ATCGGGTACA GGAGGGCAAC AACTGTATAT TACATCAACA CC--T-TCTT TTACATGGGC 16640 ||| |||||| |||||||||| |||||||| || ||| | || | || | || |||||| ATCAGGTACA GGAGGGCAAC AACTGTATGA GACTTCAGTA CCTTTATCAT CTATATGGGC 180 AGTACCACAA GACTTGAGAT CAGGAGGTGG TATAGGTGCA GCAGTCGCTA ATGGTGCAAG 16700 | ||||||| || ||||||| |||| ||||| |||||| ||| |||| |||| |||||||||| AACACCACAA GATTTGAGAT CAGGTGGTGG TATAGGAGCA GCAGAGGCTA ATGGTGCAAG 240 ATTAGCTGCA CCATAAAGAC CTCCTAACCC TAAAAGAACG TTTCGTCTAT CAACAGCGTC 16760 |||||||||| ||||||| || |||||||||| ||||||||| |||| |||| |||||||||| ATTAGCTGCA CCATAAAAAC CTCCTAACCC TAAAAGAACA TTTCTCCTAT CAACAGCGTC 300 AGGGTTTTTG TCAACGTTGT TTGCGTTGCA TGAAACCTTG AAACTTTGAT TACGCCTTCC 16820 | |||||||| ||| | | ||||||| |||||||||| ||||||||| |||||||| AAGGTTTTTG TCATGCTCGC CAACGTTGCA TGAAACCTTG AAACTTTGAC AGCGCCTTCC 360 GTGGAGGAAA AGTTGAGAGG GTTTTGATAA CAAGGATGAG TTGGTGGTGG TGAAGGAAGA 16880 ||||||||| ||||||||| |||||||||| || | ||| | | || ||| |||||| ||| ATGGAGGAAA GGTTGAGAGG GTTTTGATAA GAAAGTAGAG TGGTTGTTGG TGAAGGGAGA 420 AGAGAGGGAT TTGTTGGTGC ATAAAGGAAG AGTAGTAGTA ATAGAAGAAG AAGA 16934 |||||||||| ||||||||| |||| | | | |||| || || ||||| |||| AGAGAGGGAT TTGTTGGTGG ATAATAAAGG AAGAGTATTA GGAGTAGAAG AAGA 474 hqPGS_C08HBa0336I24.1+_SGN-E313751- (16464 16934) ******************************************************************************** EST sequence 283 -strand 470 n (File: SGN-E319313-) 1 ATTCGACTTG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC ATGAGCAGGG 61 GGGCGGATGC GGAGTTTCGT CATAGGAGGG AACTTGTAGT ACGGAACGCT ATCGATATCA 121 TCAGGTACAG GAGGGCAACA ACTGTATGAG ACTTCAGTAC CTTTATCATC TATATGGGCA 181 ACACCACAAG ATTTGAGATC AGGTGGTGGT ATAGGAGCAG CAGAGGCTAA TGGTGCAAGA 241 TTAGCTGCAC CATAAAAACC TCCTAACCCT AAAAGAACAT TTCTCCTATC AACAGCGTCA 301 AGGTTTTTGT CATGCTCGCC AACGTTGCAT GAAACCTTGA AACTTTGACA GCGCCTTCCA 361 TGGAGGAAAG GTTGAGAGGG TTTTGATAAG AAAGTAGAGT GGTTGTTGGT GAAGGGAGAA 421 GAGAGGGATT TGTTGGTGGA TAATAAAGGA AGAGTATTAG GAGTAGAAGA Predicted gene structure (within gDNA segment 15774 to 19259): Exon 1 16465 16931 ( 467 n); cDNA 1 470 ( 470 n); score: 0.860 MATCH C08HBa0336I24.1+ SGN-E319313- 0.860 467 0.994 C PGS_C08HBa0336I24.1+_SGN-E319313- (16465 16931) Alignment (genomic DNA sequence = upper lines): ATTCGACTCG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC ATGAGCAGGG 16524 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTCGACTTG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC ATGAGCAGGG 60 GGGCGGATGC GGAGTTTAGT CATAGAAGGG AACTTGTAGT ACGGAACACT ATCGATATCA 16584 |||||||||| ||||||| || ||||| |||| |||||||||| ||||||| || |||||||||| GGGCGGATGC GGAGTTTCGT CATAGGAGGG AACTTGTAGT ACGGAACGCT ATCGATATCA 120 TCGGGTACAG GAGGGCAACA ACTGTATATT ACATCAACAC C--T-TCTTT TACATGGGCA 16641 || ||||||| |||||||||| ||||||| || ||| || | | || | || ||||||| TCAGGTACAG GAGGGCAACA ACTGTATGAG ACTTCAGTAC CTTTATCATC TATATGGGCA 180 GTACCACAAG ACTTGAGATC AGGAGGTGGT ATAGGTGCAG CAGTCGCTAA TGGTGCAAGA 16701 |||||||| | |||||||| ||| |||||| ||||| |||| ||| ||||| |||||||||| ACACCACAAG ATTTGAGATC AGGTGGTGGT ATAGGAGCAG CAGAGGCTAA TGGTGCAAGA 240 TTAGCTGCAC CATAAAGACC TCCTAACCCT AAAAGAACGT TTCGTCTATC AACAGCGTCA 16761 |||||||||| |||||| ||| |||||||||| |||||||| | ||| ||||| |||||||||| TTAGCTGCAC CATAAAAACC TCCTAACCCT AAAAGAACAT TTCTCCTATC AACAGCGTCA 300 GGGTTTTTGT CAACGTTGTT TGCGTTGCAT GAAACCTTGA AACTTTGATT ACGCCTTCCG 16821 ||||||||| || | | |||||||| |||||||||| |||||||| |||||||| AGGTTTTTGT CATGCTCGCC AACGTTGCAT GAAACCTTGA AACTTTGACA GCGCCTTCCA 360 TGGAGGAAAA GTTGAGAGGG TTTTGATAAC AAGGATGAGT TGGTGGTGGT GAAGGAAGAA 16881 ||||||||| |||||||||| ||||||||| || | |||| | || |||| ||||| |||| TGGAGGAAAG GTTGAGAGGG TTTTGATAAG AAAGTAGAGT GGTTGTTGGT GAAGGGAGAA 420 GAGAGGGATT TGTTGGTGCA TAAAGGAAGA GTAGTAGTAA TAGAAGAAGA 16931 |||||||||| |||||||| | ||| | || |||| || || |||||| GAGAGGGATT TGTTGGTGGA TAATAAAGGA AGAGTATTAG GAGTAGAAGA 470 hqPGS_C08HBa0336I24.1+_SGN-E319313- (16465 16931) ******************************************************************************** EST sequence 245 -strand 440 n (File: SGN-E312841-) 1 ATTCGACTTG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC ATGAGCAGGG 61 GGGCGGATGC GGAGTTTCGT CATAGGAGGG AACTTGTAGT ACGGAACGCT ATCGATATCA 121 TCAGGTACAG GAGGGCAACA ACTGTATGAG ACTTCAGTAC CTTTATCATC TATATGGGCA 181 ACACCACAAG ATTTGAGATC AGGTGGTGGT ATAGGAGCAG CAGAGGCTAA TGGTGCAAGA 241 TTAGCTGCTC CATAAAAACC TCCTAACCCT AAAAGAACAT TTCTCCTATC AACAGCGTCA 301 AGGTTTTTGT CATGCTCGCC AACGTTGCAT GAAACCTTGA AACTTTGACA GCGCTTTCCA 361 TGGAGGAAAG GTTGAGAGGG TTTTGATAAG AAAGTAGAGT GGTTGTTGGT GAAGGGAGAA 421 GAGAGGGATT AGTTGGTGGA Predicted gene structure (within gDNA segment 15774 to 18959): Exon 1 16465 16899 ( 435 n); cDNA 1 438 ( 438 n); score: 0.868 MATCH C08HBa0336I24.1+ SGN-E312841- 0.868 435 0.989 C PGS_C08HBa0336I24.1+_SGN-E312841- (16465 16899) Alignment (genomic DNA sequence = upper lines): ATTCGACTCG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC ATGAGCAGGG 16524 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTCGACTTG TAGCCAATTG ATACTTGGCT ACGTACTCCT CATCCGCCGC ATGAGCAGGG 60 GGGCGGATGC GGAGTTTAGT CATAGAAGGG AACTTGTAGT ACGGAACACT ATCGATATCA 16584 |||||||||| ||||||| || ||||| |||| |||||||||| ||||||| || |||||||||| GGGCGGATGC GGAGTTTCGT CATAGGAGGG AACTTGTAGT ACGGAACGCT ATCGATATCA 120 TCGGGTACAG GAGGGCAACA ACTGTATATT ACATCAACAC C--T-TCTTT TACATGGGCA 16641 || ||||||| |||||||||| ||||||| || ||| || | | || | || ||||||| TCAGGTACAG GAGGGCAACA ACTGTATGAG ACTTCAGTAC CTTTATCATC TATATGGGCA 180 GTACCACAAG ACTTGAGATC AGGAGGTGGT ATAGGTGCAG CAGTCGCTAA TGGTGCAAGA 16701 |||||||| | |||||||| ||| |||||| ||||| |||| ||| ||||| |||||||||| ACACCACAAG ATTTGAGATC AGGTGGTGGT ATAGGAGCAG CAGAGGCTAA TGGTGCAAGA 240 TTAGCTGCAC CATAAAGACC TCCTAACCCT AAAAGAACGT TTCGTCTATC AACAGCGTCA 16761 |||||||| | |||||| ||| |||||||||| |||||||| | ||| ||||| |||||||||| TTAGCTGCTC CATAAAAACC TCCTAACCCT AAAAGAACAT TTCTCCTATC AACAGCGTCA 300 GGGTTTTTGT CAACGTTGTT TGCGTTGCAT GAAACCTTGA AACTTTGATT ACGCCTTCCG 16821 ||||||||| || | | |||||||| |||||||||| |||||||| ||| |||| AGGTTTTTGT CATGCTCGCC AACGTTGCAT GAAACCTTGA AACTTTGACA GCGCTTTCCA 360 TGGAGGAAAA GTTGAGAGGG TTTTGATAAC AAGGATGAGT TGGTGGTGGT GAAGGAAGAA 16881 ||||||||| |||||||||| ||||||||| || | |||| | || |||| ||||| |||| TGGAGGAAAG GTTGAGAGGG TTTTGATAAG AAAGTAGAGT GGTTGTTGGT GAAGGGAGAA 420 GAGAGGGATT TGTTGGTG 16899 |||||||||| ||||||| GAGAGGGATT AGTTGGTG 438 hqPGS_C08HBa0336I24.1+_SGN-E312841- (16465 16899) ******************************************************************************** EST sequence 365 -strand 475 n (File: SGN-E313746-) 1 CGACTTGTAG CCAATTGATA CTTGGCTACG TACTCCTCAT CCGCCGCATG AGCAGGGGGG 61 CGGATGCGGA GTTTCGTCAT AGGAGGGAAC TTGTAGTACG GAACGCTATC GATATCATCA 121 GGTACAGGAG GGCAACAACT GTATGAGACT TCAGTACCTT TATCATCTAT ATGGGCAACA 181 CCACAAGATT TGAGATCAGG TGGTGGTATA GGAGCAGCAG AGGCTAATGG TGCAAGATTA 241 GCTGCACCAT AAAAACCTCC TAACCCTAAA AGAACATTTC TCCTATCAAC AGCGTCAAGG 301 TTTTTGTCAT GCTCGCCAAC GTTGCATGAA ACCTTGAAAC TTTGACAGCG CCTTCCATGG 361 AGGAAAGGTT GAGAGGGTTT TGATAAGAAA GTAGAGTGGT TGTTGGTGAA GGGAGAAGAG 421 AGGGATTTGT TGGTGGATAA TAAAGGAAGA GTATTAGGAG TAGAAGAAGA CATTG Predicted gene structure (within gDNA segment 15804 to 19339): Exon 1 16468 16942 ( 475 n); cDNA 1 475 ( 475 n); score: 0.864 MATCH C08HBa0336I24.1+ SGN-E313746- 0.864 475 1.000 C PGS_C08HBa0336I24.1+_SGN-E313746- (16468 16942) Alignment (genomic DNA sequence = upper lines): CGACTCGTAG CCAATTGATA CTTGGCTACG TACTCCTCAT CCGCCGCATG AGCAGGGGGG 16527 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGACTTGTAG CCAATTGATA CTTGGCTACG TACTCCTCAT CCGCCGCATG AGCAGGGGGG 60 CGGATGCGGA GTTTAGTCAT AGAAGGGAAC TTGTAGTACG GAACACTATC GATATCATCG 16587 |||||||||| |||| ||||| || ||||||| |||||||||| |||| ||||| ||||||||| CGGATGCGGA GTTTCGTCAT AGGAGGGAAC TTGTAGTACG GAACGCTATC GATATCATCA 120 GGTACAGGAG GGCAACAACT GTATATTACA TCAACACC-- T-TCTTTTAC ATGGGCAGTA 16644 |||||||||| |||||||||| |||| || ||| ||| | || | || ||||||| | GGTACAGGAG GGCAACAACT GTATGAGACT TCAGTACCTT TATCATCTAT ATGGGCAACA 180 CCACAAGACT TGAGATCAGG AGGTGGTATA GGTGCAGCAG TCGCTAATGG TGCAAGATTA 16704 |||||||| | |||||||||| ||||||||| || ||||||| |||||||| |||||||||| CCACAAGATT TGAGATCAGG TGGTGGTATA GGAGCAGCAG AGGCTAATGG TGCAAGATTA 240 GCTGCACCAT AAAGACCTCC TAACCCTAAA AGAACGTTTC GTCTATCAAC AGCGTCAGGG 16764 |||||||||| ||| |||||| |||||||||| ||||| |||| |||||||| ||||||| || GCTGCACCAT AAAAACCTCC TAACCCTAAA AGAACATTTC TCCTATCAAC AGCGTCAAGG 300 TTTTTGTCAA CGTTGTTTGC GTTGCATGAA ACCTTGAAAC TTTGATTACG CCTTCCGTGG 16824 ||||||||| | | | |||||||||| |||||||||| ||||| || |||||| ||| TTTTTGTCAT GCTCGCCAAC GTTGCATGAA ACCTTGAAAC TTTGACAGCG CCTTCCATGG 360 AGGAAAAGTT GAGAGGGTTT TGATAACAAG GATGAGTTGG TGGTGGTGAA GGAAGAAGAG 16884 |||||| ||| |||||||||| |||||| || | |||| | || ||||||| || ||||||| AGGAAAGGTT GAGAGGGTTT TGATAAGAAA GTAGAGTGGT TGTTGGTGAA GGGAGAAGAG 420 AGGGATTTGT TGGTGCATAA AGGAAGAGTA GTAGTAATAG AAGAAGAAGA AGACATTG 16942 |||||||||| ||||| || | | ||| | | | |||| ||| || |||||| |||||||| AGGGATTTGT TGGTGGAT-A ATAAAG-GAA G-AGTATTAG GAGTAGAAGA AGACATTG 475 hqPGS_C08HBa0336I24.1+_SGN-E313746- (16468 16942) ******************************************************************************** EST sequence 241 -strand 439 n (File: SGN-E311565-) 1 TACGTACTCC TCATCCGCCG CATGAGCAGG GGGGCGGATG CGGAGTTTCG TCATAGGAGG 61 GAACTTGTAG TACGGAACGC TATCGATATC ATCAGGTACA GGAGGGCAAC AACTGTATGA 121 GACTTCAGTA CCTTTATCAT CTATATGGGC AACACCACAA GATTTGAGAT CAGGTGGTGG 181 TATAGGAGCA GCAGAGGCTA ATGGTGCAAG ATTAGCTGCA CCATAAAAAC CTCCTAACCC 241 TAAAAGAACA TTTCTCCTAT CAACAGCGTC AAGGTTTTTG TCATGCTCGC CAACGTTGCA 301 TGAAACCTTG AAACTTTGAC AGCGCCTTCC ATGGAGGAAA GGTTGAGAGG GTTTTGATAA 361 GAAAGTAGAG TGGTTGTTGG TGAAGGGAGA AGAGAGGGAT TTGTTGGTGG ATAATAAAGG 421 AAGAGTATTA GGAGTAGAA Predicted gene structure (within gDNA segment 15884 to 19239): Exon 1 16494 16929 ( 436 n); cDNA 1 439 ( 439 n); score: 0.852 MATCH C08HBa0336I24.1+ SGN-E311565- 0.852 436 0.993 C PGS_C08HBa0336I24.1+_SGN-E311565- (16494 16929) Alignment (genomic DNA sequence = upper lines): TACGTACTCC TCATCCGCCG CATGAGCAGG GGGGCGGATG CGGAGTTTAG TCATAGAAGG 16553 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||||| ||| TACGTACTCC TCATCCGCCG CATGAGCAGG GGGGCGGATG CGGAGTTTCG TCATAGGAGG 60 GAACTTGTAG TACGGAACAC TATCGATATC ATCGGGTACA GGAGGGCAAC AACTGTATAT 16613 |||||||||| |||||||| | |||||||||| ||| |||||| |||||||||| |||||||| GAACTTGTAG TACGGAACGC TATCGATATC ATCAGGTACA GGAGGGCAAC AACTGTATGA 120 TACATCAACA CC--T-TCTT TTACATGGGC AGTACCACAA GACTTGAGAT CAGGAGGTGG 16670 || ||| | || | || | || |||||| | ||||||| || ||||||| |||| ||||| GACTTCAGTA CCTTTATCAT CTATATGGGC AACACCACAA GATTTGAGAT CAGGTGGTGG 180 TATAGGTGCA GCAGTCGCTA ATGGTGCAAG ATTAGCTGCA CCATAAAGAC CTCCTAACCC 16730 |||||| ||| |||| |||| |||||||||| |||||||||| ||||||| || |||||||||| TATAGGAGCA GCAGAGGCTA ATGGTGCAAG ATTAGCTGCA CCATAAAAAC CTCCTAACCC 240 TAAAAGAACG TTTCGTCTAT CAACAGCGTC AGGGTTTTTG TCAACGTTGT TTGCGTTGCA 16790 ||||||||| |||| |||| |||||||||| | |||||||| ||| | | ||||||| TAAAAGAACA TTTCTCCTAT CAACAGCGTC AAGGTTTTTG TCATGCTCGC CAACGTTGCA 300 TGAAACCTTG AAACTTTGAT TACGCCTTCC GTGGAGGAAA AGTTGAGAGG GTTTTGATAA 16850 |||||||||| ||||||||| |||||||| ||||||||| ||||||||| |||||||||| TGAAACCTTG AAACTTTGAC AGCGCCTTCC ATGGAGGAAA GGTTGAGAGG GTTTTGATAA 360 CAAGGATGAG TTGGTGGTGG TGAAGGAAGA AGAGAGGGAT TTGTTGGTGC ATAAAGGAAG 16910 || | ||| | | || ||| |||||| ||| |||||||||| ||||||||| |||| | | GAAAGTAGAG TGGTTGTTGG TGAAGGGAGA AGAGAGGGAT TTGTTGGTGG ATAATAAAGG 420 AGTAGTAGTA ATAGAAGAA 16929 | |||| || || |||| AAGAGTATTA GGAGTAGAA 439 hqPGS_C08HBa0336I24.1+_SGN-E311565- (16494 16929) ******************************************************************************** EST sequence 243 -strand 435 n (File: SGN-E311538-) 1 CATCCGCCGC ATGAGCAGGG GGGCGGATGC GGAGTTTCGT CATAGGAGGG AACTTGTAGT 61 ACGGAACGCT ATCGATATCA TCAGGTACAG GAGGGCAACA ACTGTATGAG ACTTCAGTAC 121 CTTTATCATC TATATGGGCA ACACCACAAG ATTTGAGATC AGGTGGTGGT ATAGGAGCAG 181 CAGAGGCTAA TGGTGCAAGA TTAGCTGCAC CATAAAAACC TCCTAACCCT AAAAGAACAT 241 TTCTCCTATC AACAGCGTCA AGGTTTTTGT CATGCTCGCC AACGTTGCAT GAAACCTTGA 301 AACTTTGACA GCGCCTTCCA TGGAGGAAAG GTTGAGAGGG TTTTGATAAG AAAGTAGAGT 361 GGTTGTTGGT GAAGGGAGAA GAGAGGGATT TGTTGGTGGA TAATAAAGGA AGAGTATTAG 421 GAGTAGAAGA AGACA Predicted gene structure (within gDNA segment 15895 to 19309): Exon 1 16505 16939 ( 435 n); cDNA 1 435 ( 435 n); score: 0.854 MATCH C08HBa0336I24.1+ SGN-E311538- 0.854 435 1.000 C PGS_C08HBa0336I24.1+_SGN-E311538- (16505 16939) Alignment (genomic DNA sequence = upper lines): CATCCGCCGC ATGAGCAGGG GGGCGGATGC GGAGTTTAGT CATAGAAGGG AACTTGTAGT 16564 |||||||||| |||||||||| |||||||||| ||||||| || ||||| |||| |||||||||| CATCCGCCGC ATGAGCAGGG GGGCGGATGC GGAGTTTCGT CATAGGAGGG AACTTGTAGT 60 ACGGAACACT ATCGATATCA TCGGGTACAG GAGGGCAACA ACTGTATATT ACATCAACAC 16624 ||||||| || |||||||||| || ||||||| |||||||||| ||||||| || ||| || ACGGAACGCT ATCGATATCA TCAGGTACAG GAGGGCAACA ACTGTATGAG ACTTCAGTAC 120 C--T-TCTTT TACATGGGCA GTACCACAAG ACTTGAGATC AGGAGGTGGT ATAGGTGCAG 16681 | | || | || ||||||| |||||||| | |||||||| ||| |||||| ||||| |||| CTTTATCATC TATATGGGCA ACACCACAAG ATTTGAGATC AGGTGGTGGT ATAGGAGCAG 180 CAGTCGCTAA TGGTGCAAGA TTAGCTGCAC CATAAAGACC TCCTAACCCT AAAAGAACGT 16741 ||| ||||| |||||||||| |||||||||| |||||| ||| |||||||||| |||||||| | CAGAGGCTAA TGGTGCAAGA TTAGCTGCAC CATAAAAACC TCCTAACCCT AAAAGAACAT 240 TTCGTCTATC AACAGCGTCA GGGTTTTTGT CAACGTTGTT TGCGTTGCAT GAAACCTTGA 16801 ||| ||||| |||||||||| ||||||||| || | | |||||||| |||||||||| TTCTCCTATC AACAGCGTCA AGGTTTTTGT CATGCTCGCC AACGTTGCAT GAAACCTTGA 300 AACTTTGATT ACGCCTTCCG TGGAGGAAAA GTTGAGAGGG TTTTGATAAC AAGGATGAGT 16861 |||||||| |||||||| ||||||||| |||||||||| ||||||||| || | |||| AACTTTGACA GCGCCTTCCA TGGAGGAAAG GTTGAGAGGG TTTTGATAAG AAAGTAGAGT 360 TGGTGGTGGT GAAGGAAGAA GAGAGGGATT TGTTGGTGCA TAAAGGAAGA GTAGTAGTAA 16921 | || |||| ||||| |||| |||||||||| |||||||| | | || ||| | || |||| GGTTGTTGGT GAAGGGAGAA GAGAGGGATT TGTTGGTGGA T-AATAAAG- GAAG-AGTAT 417 TAGAAGAAGA AGAAGACA 16939 ||| || ||| |||||||| TAGGAGTAGA AGAAGACA 435 hqPGS_C08HBa0336I24.1+_SGN-E311538- (16505 16939) ******************************************************************************** EST sequence 350 -strand 433 n (File: SGN-E313063-) 1 CATCCGCCGC ATGAGCAGGG GGGCGGATGC GGAGTTTCGT CATAGGAGGG AACTTGTAGT 61 ACGGAACGCT ATCGATATCA TCAGGTACAG GAGGGCAACA ACTGTATGAG ACTTCAGTAC 121 CTTTATCATC TATATGGGCA ACACCACAAG ATTTGAGATC AGGTGGTGGT ATAGGAGCAG 181 CAGAGGCTAA TGGTGCAAGA TTAGCTGCAC CATAAAAACC TCCTAACCCT AAAAGAACAT 241 TTCTCCTATC AACAGCGTCA AGGTTTTTGT CATGCTCGCC AACGTTGCAT GAAACCTTGA 301 AACTTTGACA GCGCCTTCCA TGGAGGAAAG GTTGAGAGGG TTTTGATAAG AAAGTAGAGT 361 GGTTGTTGGT GAAGGGAGAA GAGAGGGATT TGTTGGTGGA TAATAAAGGA AGAGTATTAG 421 GAGTAGAAGA AGA Predicted gene structure (within gDNA segment 15895 to 19289): Exon 1 16505 16934 ( 430 n); cDNA 1 433 ( 433 n); score: 0.850 MATCH C08HBa0336I24.1+ SGN-E313063- 0.850 430 0.993 C PGS_C08HBa0336I24.1+_SGN-E313063- (16505 16934) Alignment (genomic DNA sequence = upper lines): CATCCGCCGC ATGAGCAGGG GGGCGGATGC GGAGTTTAGT CATAGAAGGG AACTTGTAGT 16564 |||||||||| |||||||||| |||||||||| ||||||| || ||||| |||| |||||||||| CATCCGCCGC ATGAGCAGGG GGGCGGATGC GGAGTTTCGT CATAGGAGGG AACTTGTAGT 60 ACGGAACACT ATCGATATCA TCGGGTACAG GAGGGCAACA ACTGTATATT ACATCAACAC 16624 ||||||| || |||||||||| || ||||||| |||||||||| ||||||| || ||| || ACGGAACGCT ATCGATATCA TCAGGTACAG GAGGGCAACA ACTGTATGAG ACTTCAGTAC 120 C--T-TCTTT TACATGGGCA GTACCACAAG ACTTGAGATC AGGAGGTGGT ATAGGTGCAG 16681 | | || | || ||||||| |||||||| | |||||||| ||| |||||| ||||| |||| CTTTATCATC TATATGGGCA ACACCACAAG ATTTGAGATC AGGTGGTGGT ATAGGAGCAG 180 CAGTCGCTAA TGGTGCAAGA TTAGCTGCAC CATAAAGACC TCCTAACCCT AAAAGAACGT 16741 ||| ||||| |||||||||| |||||||||| |||||| ||| |||||||||| |||||||| | CAGAGGCTAA TGGTGCAAGA TTAGCTGCAC CATAAAAACC TCCTAACCCT AAAAGAACAT 240 TTCGTCTATC AACAGCGTCA GGGTTTTTGT CAACGTTGTT TGCGTTGCAT GAAACCTTGA 16801 ||| ||||| |||||||||| ||||||||| || | | |||||||| |||||||||| TTCTCCTATC AACAGCGTCA AGGTTTTTGT CATGCTCGCC AACGTTGCAT GAAACCTTGA 300 AACTTTGATT ACGCCTTCCG TGGAGGAAAA GTTGAGAGGG TTTTGATAAC AAGGATGAGT 16861 |||||||| |||||||| ||||||||| |||||||||| ||||||||| || | |||| AACTTTGACA GCGCCTTCCA TGGAGGAAAG GTTGAGAGGG TTTTGATAAG AAAGTAGAGT 360 TGGTGGTGGT GAAGGAAGAA GAGAGGGATT TGTTGGTGCA TAAAGGAAGA GTAGTAGTAA 16921 | || |||| ||||| |||| |||||||||| |||||||| | ||| | || |||| || GGTTGTTGGT GAAGGGAGAA GAGAGGGATT TGTTGGTGGA TAATAAAGGA AGAGTATTAG 420 TAGAAGAAGA AGA 16934 || |||||| ||| GAGTAGAAGA AGA 433 hqPGS_C08HBa0336I24.1+_SGN-E313063- (16505 16934) ******************************************************************************** EST sequence 62 -strand 425 n (File: SGN-E324882-) 1 CATCCGCCGC ATGAGCAGGG GGGCGGATGC GAAGTTTCGT CATAGGAGGG AACTTGTAGT 61 ACGGAACGCT ATCGATATCA TCAGGTACAG GAGGGCAACA ACTGTATGAG ACTTCAGTAC 121 CTTTATCATC TATATGGGCA ACACCACAAG ATTTGAGATC AGGTGGTGGT ATAGGAGCAG 181 CAGAGGCTAA TGGTGCAAGA TTAGCTGCAC CATAAAAACC TCCTAACCCT AAAAGAACAT 241 TTCTCCTATC AACAGCGTCA AGGTTTTTGT CATGCTCGCC AACGTTGCAT GAAACCTTGA 301 AACTTTGACA GCGCCTTCCA TGGAGGAAAG GTTGAGAGGG TTTTGATAAG AAAGTAGAGT 361 GGTTGTTGGT CAAGGGAGAA GAGAAGGATT CGTTGGTGGA TAATAAAGGA AGAGTATTAG 421 GAGTA Predicted gene structure (within gDNA segment 15895 to 19209): Exon 1 16505 16924 ( 420 n); cDNA 1 423 ( 423 n); score: 0.839 MATCH C08HBa0336I24.1+ SGN-E324882- 0.839 420 0.988 C PGS_C08HBa0336I24.1+_SGN-E324882- (16505 16924) Alignment (genomic DNA sequence = upper lines): CATCCGCCGC ATGAGCAGGG GGGCGGATGC GGAGTTTAGT CATAGAAGGG AACTTGTAGT 16564 |||||||||| |||||||||| |||||||||| | ||||| || ||||| |||| |||||||||| CATCCGCCGC ATGAGCAGGG GGGCGGATGC GAAGTTTCGT CATAGGAGGG AACTTGTAGT 60 ACGGAACACT ATCGATATCA TCGGGTACAG GAGGGCAACA ACTGTATATT ACATCAACAC 16624 ||||||| || |||||||||| || ||||||| |||||||||| ||||||| || ||| || ACGGAACGCT ATCGATATCA TCAGGTACAG GAGGGCAACA ACTGTATGAG ACTTCAGTAC 120 C--T-TCTTT TACATGGGCA GTACCACAAG ACTTGAGATC AGGAGGTGGT ATAGGTGCAG 16681 | | || | || ||||||| |||||||| | |||||||| ||| |||||| ||||| |||| CTTTATCATC TATATGGGCA ACACCACAAG ATTTGAGATC AGGTGGTGGT ATAGGAGCAG 180 CAGTCGCTAA TGGTGCAAGA TTAGCTGCAC CATAAAGACC TCCTAACCCT AAAAGAACGT 16741 ||| ||||| |||||||||| |||||||||| |||||| ||| |||||||||| |||||||| | CAGAGGCTAA TGGTGCAAGA TTAGCTGCAC CATAAAAACC TCCTAACCCT AAAAGAACAT 240 TTCGTCTATC AACAGCGTCA GGGTTTTTGT CAACGTTGTT TGCGTTGCAT GAAACCTTGA 16801 ||| ||||| |||||||||| ||||||||| || | | |||||||| |||||||||| TTCTCCTATC AACAGCGTCA AGGTTTTTGT CATGCTCGCC AACGTTGCAT GAAACCTTGA 300 AACTTTGATT ACGCCTTCCG TGGAGGAAAA GTTGAGAGGG TTTTGATAAC AAGGATGAGT 16861 |||||||| |||||||| ||||||||| |||||||||| ||||||||| || | |||| AACTTTGACA GCGCCTTCCA TGGAGGAAAG GTTGAGAGGG TTTTGATAAG AAAGTAGAGT 360 TGGTGGTGGT GAAGGAAGAA GAGAGGGATT TGTTGGTGCA TAAAGGAAGA GTAGTAGTAA 16921 | || |||| |||| |||| |||| ||||| ||||||| | ||| | || |||| || GGTTGTTGGT CAAGGGAGAA GAGAAGGATT CGTTGGTGGA TAATAAAGGA AGAGTATTAG 420 TAG 16924 || GAG 423 hqPGS_C08HBa0336I24.1+_SGN-E324882- (16505 16924) ******************************************************************************** EST sequence 341 -strand 428 n (File: SGN-E313346-) 1 ATCCGCCGCA TGAGCAGGGG GGCGGATGCG GAGTTTCGTC ATAGGAGGGA ACTTGTAGTA 61 CGGAACGCTA TCGATATCAT CAGGTACAGG AGGGCAACAA CTGTATGAGA CTTCAGTACC 121 TTTATCATCT ATATGGGCAA CACCACAAGA TTTGAGATCA GGTGGTGGTA TAGGAGCAGC 181 AGAGGCTAAT GGTGCAAGAT TAGCTGCACC ATAAAAACCT CCTAACCCTA AGAGAACATT 241 TCTCCTATCA ACAGCGTCAA GGTTTTTGTC ATGCTCGCCA ACGTTGCATG AAACCTTGAA 301 ACTTTGACAG CGCCTTCCAT GGAGGAAAGG TTGAGAGGGT TTTGATAAGA AAGTAGAGTG 361 GTTGTTGGTG AAGGGAGAAG AGAGGGATTT GTTGGTGGAT AATAAAGGAA GAGTATTAGG 421 AGTAGAAC Predicted gene structure (within gDNA segment 15896 to 19447): Exon 1 16506 16929 ( 424 n); cDNA 1 427 ( 427 n); score: 0.846 MATCH C08HBa0336I24.1+ SGN-E313346- 0.846 424 0.991 C PGS_C08HBa0336I24.1+_SGN-E313346- (16506 16929) Alignment (genomic DNA sequence = upper lines): ATCCGCCGCA TGAGCAGGGG GGCGGATGCG GAGTTTAGTC ATAGAAGGGA ACTTGTAGTA 16565 |||||||||| |||||||||| |||||||||| |||||| ||| |||| ||||| |||||||||| ATCCGCCGCA TGAGCAGGGG GGCGGATGCG GAGTTTCGTC ATAGGAGGGA ACTTGTAGTA 60 CGGAACACTA TCGATATCAT CGGGTACAGG AGGGCAACAA CTGTATATTA CATCAACACC 16625 |||||| ||| |||||||||| | |||||||| |||||||||| |||||| | | ||| ||| CGGAACGCTA TCGATATCAT CAGGTACAGG AGGGCAACAA CTGTATGAGA CTTCAGTACC 120 --T-TCTTTT ACATGGGCAG TACCACAAGA CTTGAGATCA GGAGGTGGTA TAGGTGCAGC 16682 | || | | | ||||||| ||||||||| ||||||||| || ||||||| |||| ||||| TTTATCATCT ATATGGGCAA CACCACAAGA TTTGAGATCA GGTGGTGGTA TAGGAGCAGC 180 AGTCGCTAAT GGTGCAAGAT TAGCTGCACC ATAAAGACCT CCTAACCCTA AAAGAACGTT 16742 || |||||| |||||||||| |||||||||| ||||| |||| |||||||||| | ||||| || AGAGGCTAAT GGTGCAAGAT TAGCTGCACC ATAAAAACCT CCTAACCCTA AGAGAACATT 240 TCGTCTATCA ACAGCGTCAG GGTTTTTGTC AACGTTGTTT GCGTTGCATG AAACCTTGAA 16802 || |||||| ||||||||| |||||||||| | | | ||||||||| |||||||||| TCTCCTATCA ACAGCGTCAA GGTTTTTGTC ATGCTCGCCA ACGTTGCATG AAACCTTGAA 300 ACTTTGATTA CGCCTTCCGT GGAGGAAAAG TTGAGAGGGT TTTGATAACA AGGATGAGTT 16862 ||||||| |||||||| | |||||||| | |||||||||| |||||||| | | | |||| ACTTTGACAG CGCCTTCCAT GGAGGAAAGG TTGAGAGGGT TTTGATAAGA AAGTAGAGTG 360 GGTGGTGGTG AAGGAAGAAG AGAGGGATTT GTTGGTGCAT AAAGGAAGAG TAGTAGTAAT 16922 | || ||||| |||| ||||| |||||||||| ||||||| || || | || |||| || GTTGTTGGTG AAGGGAGAAG AGAGGGATTT GTTGGTGGAT AATAAAGGAA GAGTATTAGG 420 AGAAGAA 16929 || |||| AGTAGAA 427 hqPGS_C08HBa0336I24.1+_SGN-E313346- (16506 16929) ******************************************************************************** EST sequence 95 -strand 416 n (File: SGN-E326402-) 1 ATCCGCCGCA TGAGCAGGGG GGCGGATGCG GAGTTTAGTC ATAGAAGGGA ACTTGTAGTA 61 CGGAACACTA TCGATATCAT CGGGTACAGG AGGGCAACAA CTGTATATTA CATCAACACC 121 TTCTTTTACA TGGGCAGTAC CACAAGACTT GAGATCAGGA GGTGGTATAG GTGCAGCAGT 181 CGCTAATGGT GCAAGATTAG CTGCACCATA AAGACCTCCT AACCCTAAAA GAACGTTTCG 241 TCTATCAACA GCGTCAGGGT TTTTGTCAAC GTTGTTTGCG TTGCATGAAA CCTTGAAACT 301 TTGATTACGC CTTCGGTGGA GGAAAAGTTG AGAGGGTTTT GATAACAAGG ATGAGTTGGT 361 GGTGGTGAAG GAATAATAGA AAGATTTGCT GGTGCATAAA GGAAGAGTAG TAGTAA Predicted gene structure (within gDNA segment 15896 to 17521): Exon 1 16506 16921 ( 416 n); cDNA 1 416 ( 416 n); score: 0.986 MATCH C08HBa0336I24.1+ SGN-E326402- 0.986 416 1.000 C PGS_C08HBa0336I24.1+_SGN-E326402- (16506 16921) Alignment (genomic DNA sequence = upper lines): ATCCGCCGCA TGAGCAGGGG GGCGGATGCG GAGTTTAGTC ATAGAAGGGA ACTTGTAGTA 16565 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCCGCCGCA TGAGCAGGGG GGCGGATGCG GAGTTTAGTC ATAGAAGGGA ACTTGTAGTA 60 CGGAACACTA TCGATATCAT CGGGTACAGG AGGGCAACAA CTGTATATTA CATCAACACC 16625 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGAACACTA TCGATATCAT CGGGTACAGG AGGGCAACAA CTGTATATTA CATCAACACC 120 TTCTTTTACA TGGGCAGTAC CACAAGACTT GAGATCAGGA GGTGGTATAG GTGCAGCAGT 16685 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTTTTACA TGGGCAGTAC CACAAGACTT GAGATCAGGA GGTGGTATAG GTGCAGCAGT 180 CGCTAATGGT GCAAGATTAG CTGCACCATA AAGACCTCCT AACCCTAAAA GAACGTTTCG 16745 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTAATGGT GCAAGATTAG CTGCACCATA AAGACCTCCT AACCCTAAAA GAACGTTTCG 240 TCTATCAACA GCGTCAGGGT TTTTGTCAAC GTTGTTTGCG TTGCATGAAA CCTTGAAACT 16805 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTATCAACA GCGTCAGGGT TTTTGTCAAC GTTGTTTGCG TTGCATGAAA CCTTGAAACT 300 TTGATTACGC CTTCCGTGGA GGAAAAGTTG AGAGGGTTTT GATAACAAGG ATGAGTTGGT 16865 |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATTACGC CTTCGGTGGA GGAAAAGTTG AGAGGGTTTT GATAACAAGG ATGAGTTGGT 360 GGTGGTGAAG GAAGAAGAGA GGGATTTGTT GGTGCATAAA GGAAGAGTAG TAGTAA 16921 |||||||||| ||| || ||| |||||| | |||||||||| |||||||||| |||||| GGTGGTGAAG GAATAATAGA AAGATTTGCT GGTGCATAAA GGAAGAGTAG TAGTAA 416 hqPGS_C08HBa0336I24.1+_SGN-E326402- (16506 16921) ******************************************************************************** EST sequence 157 -strand 371 n (File: SGN-E325498-) 1 TCCGCCGCAT GAGCAGGGGG GCGGATGCGG AGTTTCGTCA TAGGAGGGAA CTTGTAGTAC 61 GGAACGCTAT CGATATCATC AGGTACAGGA GGGCAACAAC TGTATGAGAC TTCAGTACCT 121 TTATCATCTA TATGGGCAAC ACCACAAGAT TTGAGATCAG GTGGTGGTAT AGGAGCAGCA 181 GAGGCTAATG GTGCAAGATT AGCTGCACCA TAAAAACCTC CTAACCCTAA AAGAACATTT 241 CTCCTATCAC AGCGTCAAGG TTTTTGTCAT GCTCGCCAAC GTTGCATGAA ACCTTGAACT 301 TTGCAGCGCC TTCCATGAGG AAAGGTTGAG AGGGTTTTGA TAAGAAAGTA GAGTGGTTGT 361 TGGTGAAGGG A Predicted gene structure (within gDNA segment 15897 to 18689): Exon 1 16507 16876 ( 370 n); cDNA 1 369 ( 369 n); score: 0.847 MATCH C08HBa0336I24.1+ SGN-E325498- 0.847 370 0.997 C PGS_C08HBa0336I24.1+_SGN-E325498- (16507 16876) Alignment (genomic DNA sequence = upper lines): TCCGCCGCAT GAGCAGGGGG GCGGATGCGG AGTTTAGTCA TAGAAGGGAA CTTGTAGTAC 16566 |||||||||| |||||||||| |||||||||| ||||| |||| ||| |||||| |||||||||| TCCGCCGCAT GAGCAGGGGG GCGGATGCGG AGTTTCGTCA TAGGAGGGAA CTTGTAGTAC 60 GGAACACTAT CGATATCATC GGGTACAGGA GGGCAACAAC TGTATATTAC ATCAACACC- 16625 ||||| |||| |||||||||| ||||||||| |||||||||| ||||| || ||| ||| GGAACGCTAT CGATATCATC AGGTACAGGA GGGCAACAAC TGTATGAGAC TTCAGTACCT 120 -T-TCTTTTA CATGGGCAGT ACCACAAGAC TTGAGATCAG GAGGTGGTAT AGGTGCAGCA 16683 | || | || ||||||| ||||||||| |||||||||| | |||||||| ||| |||||| TTATCATCTA TATGGGCAAC ACCACAAGAT TTGAGATCAG GTGGTGGTAT AGGAGCAGCA 180 GTCGCTAATG GTGCAAGATT AGCTGCACCA TAAAGACCTC CTAACCCTAA AAGAACGTTT 16743 | ||||||| |||||||||| |||||||||| |||| ||||| |||||||||| |||||| ||| GAGGCTAATG GTGCAAGATT AGCTGCACCA TAAAAACCTC CTAACCCTAA AAGAACATTT 240 CGTCTATCAA CAGCGTCAGG GTTTTTGTCA ACGTTGTTTG CGTTGCATGA AACCTTGAAA 16803 | ||||| | |||||||| | |||||||||| | | |||||||||| ||||||| || CTCCTATC-A CAGCGTCAAG GTTTTTGTCA TGCTCGCCAA CGTTGCATGA AACCTTG-AA 298 CTTTGATTAC GCCTTCCGTG GAGGAAAAGT TGAGAGGGTT TTGATAACAA GGATGAGTTG 16863 ||||| | ||||||| | ||||||| || |||||||||| ||||||| || | |||| | CTTTG-CAGC GCCTTCCAT- GAGGAAAGGT TGAGAGGGTT TTGATAAGAA AGTAGAGTGG 356 GTGGTGGTGA AGG 16876 || |||||| ||| TTGTTGGTGA AGG 369 hqPGS_C08HBa0336I24.1+_SGN-E325498- (16507 16876) ******************************************************************************** EST sequence 271 -strand 419 n (File: SGN-E335708-) 1 CATGAGCAGG GGGGCGGATG CGGAGTTTCG TCATAGGAGG GAACTTGTAG TACGGAACGC 61 TATCGATATC ATCAGGTACA GGAGGGCAAC ATCTGTATGA GACTTCAGTA CCTTTATCAT 121 CTATATGGGC AACACCACAA GATTTGAGAT CAGGTGGTGG TATAGTAGCA GCAGAGGCTA 181 ATGGTGCAAG ATTAGCTGCA CCATAAAAAC CTCCTAACCC TAAAAGAACA TTTCTCCTAT 241 CAACAGCGTC AAGGTTTTTG TCATGCTCGC CAACGTTGCA TGAAACCTTG AAACTTTGAC 301 AGCGCCTTCC ATGGAGGAAA GGTTGAGAGG GTTTTGATAA GAAAGTAGAG TGGTTGTTGG 361 TGAAGGGAGA AGAGAGGGAT TTGTTGGTGG ATAATAAAGG AAGAGTATTA GGAGTAGCA Predicted gene structure (within gDNA segment 15904 to 19239): Exon 1 16514 16927 ( 414 n); cDNA 1 417 ( 417 n); score: 0.839 MATCH C08HBa0336I24.1+ SGN-E335708- 0.839 414 0.988 C PGS_C08HBa0336I24.1+_SGN-E335708- (16514 16927) Alignment (genomic DNA sequence = upper lines): CATGAGCAGG GGGGCGGATG CGGAGTTTAG TCATAGAAGG GAACTTGTAG TACGGAACAC 16573 |||||||||| |||||||||| |||||||| | |||||| ||| |||||||||| |||||||| | CATGAGCAGG GGGGCGGATG CGGAGTTTCG TCATAGGAGG GAACTTGTAG TACGGAACGC 60 TATCGATATC ATCGGGTACA GGAGGGCAAC AACTGTATAT TACATCAACA CC--T-TCTT 16630 |||||||||| ||| |||||| |||||||||| | |||||| || ||| | || | || | TATCGATATC ATCAGGTACA GGAGGGCAAC ATCTGTATGA GACTTCAGTA CCTTTATCAT 120 TTACATGGGC AGTACCACAA GACTTGAGAT CAGGAGGTGG TATAGGTGCA GCAGTCGCTA 16690 || |||||| | ||||||| || ||||||| |||| ||||| ||||| ||| |||| |||| CTATATGGGC AACACCACAA GATTTGAGAT CAGGTGGTGG TATAGTAGCA GCAGAGGCTA 180 ATGGTGCAAG ATTAGCTGCA CCATAAAGAC CTCCTAACCC TAAAAGAACG TTTCGTCTAT 16750 |||||||||| |||||||||| ||||||| || |||||||||| ||||||||| |||| |||| ATGGTGCAAG ATTAGCTGCA CCATAAAAAC CTCCTAACCC TAAAAGAACA TTTCTCCTAT 240 CAACAGCGTC AGGGTTTTTG TCAACGTTGT TTGCGTTGCA TGAAACCTTG AAACTTTGAT 16810 |||||||||| | |||||||| ||| | | ||||||| |||||||||| ||||||||| CAACAGCGTC AAGGTTTTTG TCATGCTCGC CAACGTTGCA TGAAACCTTG AAACTTTGAC 300 TACGCCTTCC GTGGAGGAAA AGTTGAGAGG GTTTTGATAA CAAGGATGAG TTGGTGGTGG 16870 |||||||| ||||||||| ||||||||| |||||||||| || | ||| | | || ||| AGCGCCTTCC ATGGAGGAAA GGTTGAGAGG GTTTTGATAA GAAAGTAGAG TGGTTGTTGG 360 TGAAGGAAGA AGAGAGGGAT TTGTTGGTGC ATAAAGGAAG AGTAGTAGTA ATAGAAG 16927 |||||| ||| |||||||||| ||||||||| |||| | | | |||| || || || TGAAGGGAGA AGAGAGGGAT TTGTTGGTGG ATAATAAAGG AAGAGTATTA GGAGTAG 417 hqPGS_C08HBa0336I24.1+_SGN-E335708- (16514 16927) ******************************************************************************** EST sequence 347 -strand 408 n (File: SGN-E331180-) 1 CATGAGCAGG GGGGCGGATG CGGAGTTTCG TCATAGGAGG GAACTTGTAG TACGGAACGC 61 TATCGATATC ATCAGGTACA GGAGGGCAAC AACTGTATGA GACTTCAGTA CCTTTATCAT 121 CTATATGGGC AACACCACAA GATTTGAGAT CAGGTGGTGG TATAGGAGCA GCAGAGGCTA 181 ATGGTGCAAG ATTAGCTGCA CCATAAAAAC CTCCTAACCC TAAAAGAACA TTTCTCCTAT 241 CAACAGCGTC AAGGTTTTTG TCATGCTCGC CAACGTTGCA TGAAACCTTG AAACTTTGAC 301 AGCGCCTTCC ATGGAGGAAA GGTTGAGAGG GTTTTGATAA GAAAGTAGAG TGGTTGTTGG 361 TGAAGGGAGA AGAGAGGGAT TTGTTGGTGG ATAATAAAGG AAGAGTAT Predicted gene structure (within gDNA segment 15904 to 19129): Exon 1 16514 16917 ( 404 n); cDNA 1 407 ( 407 n); score: 0.850 MATCH C08HBa0336I24.1+ SGN-E331180- 0.850 404 0.990 C PGS_C08HBa0336I24.1+_SGN-E331180- (16514 16917) Alignment (genomic DNA sequence = upper lines): CATGAGCAGG GGGGCGGATG CGGAGTTTAG TCATAGAAGG GAACTTGTAG TACGGAACAC 16573 |||||||||| |||||||||| |||||||| | |||||| ||| |||||||||| |||||||| | CATGAGCAGG GGGGCGGATG CGGAGTTTCG TCATAGGAGG GAACTTGTAG TACGGAACGC 60 TATCGATATC ATCGGGTACA GGAGGGCAAC AACTGTATAT TACATCAACA CC--T-TCTT 16630 |||||||||| ||| |||||| |||||||||| |||||||| || ||| | || | || | TATCGATATC ATCAGGTACA GGAGGGCAAC AACTGTATGA GACTTCAGTA CCTTTATCAT 120 TTACATGGGC AGTACCACAA GACTTGAGAT CAGGAGGTGG TATAGGTGCA GCAGTCGCTA 16690 || |||||| | ||||||| || ||||||| |||| ||||| |||||| ||| |||| |||| CTATATGGGC AACACCACAA GATTTGAGAT CAGGTGGTGG TATAGGAGCA GCAGAGGCTA 180 ATGGTGCAAG ATTAGCTGCA CCATAAAGAC CTCCTAACCC TAAAAGAACG TTTCGTCTAT 16750 |||||||||| |||||||||| ||||||| || |||||||||| ||||||||| |||| |||| ATGGTGCAAG ATTAGCTGCA CCATAAAAAC CTCCTAACCC TAAAAGAACA TTTCTCCTAT 240 CAACAGCGTC AGGGTTTTTG TCAACGTTGT TTGCGTTGCA TGAAACCTTG AAACTTTGAT 16810 |||||||||| | |||||||| ||| | | ||||||| |||||||||| ||||||||| CAACAGCGTC AAGGTTTTTG TCATGCTCGC CAACGTTGCA TGAAACCTTG AAACTTTGAC 300 TACGCCTTCC GTGGAGGAAA AGTTGAGAGG GTTTTGATAA CAAGGATGAG TTGGTGGTGG 16870 |||||||| ||||||||| ||||||||| |||||||||| || | ||| | | || ||| AGCGCCTTCC ATGGAGGAAA GGTTGAGAGG GTTTTGATAA GAAAGTAGAG TGGTTGTTGG 360 TGAAGGAAGA AGAGAGGGAT TTGTTGGTGC ATAAAGGAAG AGTAGTA 16917 |||||| ||| |||||||||| ||||||||| |||| | | | |||| TGAAGGGAGA AGAGAGGGAT TTGTTGGTGG ATAATAAAGG AAGAGTA 407 hqPGS_C08HBa0336I24.1+_SGN-E331180- (16514 16917) ******************************************************************************** EST sequence 261 -strand 410 n (File: SGN-E337083-) 1 ATGAGCAGGG GGGCGGATGC GGAGTTTCGT CATAGGAGGG AACTTGTAGT ACGGAACGCT 61 ATCGATATCA TCAGGTACAG GAGGGCAACA ACTGTATGAG ACTTCAGTAC CTTTATCATC 121 TATATGGGCA ACACCACAAG ATTTGAGATC AGGTGGTGGT ATAGGAGCAG CAGAGGCTAA 181 TGGTGCAAGA TTAGCTGCAC CATAAAAACC TCCTAACCCT AAAAGAACAT TTCTCCTATC 241 AACAGCGTCA AGGTTTTTGT CATGCTCGCC AACGTTGCAT GAAACCTTGA AACTTTGACA 301 GCGCCTTCCA TGGAGGAAAG GTTGAGAGGG TTTTGATAAG AAAGTAGAGT GGTTGTTGGT 361 GAAGGGAGAA GAGAGGGATT TGTTGGTGGA TAATAAAGGA AGAGTATTAG Predicted gene structure (within gDNA segment 15905 to 19159): Exon 1 16515 16920 ( 406 n); cDNA 1 409 ( 409 n); score: 0.849 MATCH C08HBa0336I24.1+ SGN-E337083- 0.849 406 0.990 C PGS_C08HBa0336I24.1+_SGN-E337083- (16515 16920) Alignment (genomic DNA sequence = upper lines): ATGAGCAGGG GGGCGGATGC GGAGTTTAGT CATAGAAGGG AACTTGTAGT ACGGAACACT 16574 |||||||||| |||||||||| ||||||| || ||||| |||| |||||||||| ||||||| || ATGAGCAGGG GGGCGGATGC GGAGTTTCGT CATAGGAGGG AACTTGTAGT ACGGAACGCT 60 ATCGATATCA TCGGGTACAG GAGGGCAACA ACTGTATATT ACATCAACAC C--T-TCTTT 16631 |||||||||| || ||||||| |||||||||| ||||||| || ||| || | | || | ATCGATATCA TCAGGTACAG GAGGGCAACA ACTGTATGAG ACTTCAGTAC CTTTATCATC 120 TACATGGGCA GTACCACAAG ACTTGAGATC AGGAGGTGGT ATAGGTGCAG CAGTCGCTAA 16691 || ||||||| |||||||| | |||||||| ||| |||||| ||||| |||| ||| ||||| TATATGGGCA ACACCACAAG ATTTGAGATC AGGTGGTGGT ATAGGAGCAG CAGAGGCTAA 180 TGGTGCAAGA TTAGCTGCAC CATAAAGACC TCCTAACCCT AAAAGAACGT TTCGTCTATC 16751 |||||||||| |||||||||| |||||| ||| |||||||||| |||||||| | ||| ||||| TGGTGCAAGA TTAGCTGCAC CATAAAAACC TCCTAACCCT AAAAGAACAT TTCTCCTATC 240 AACAGCGTCA GGGTTTTTGT CAACGTTGTT TGCGTTGCAT GAAACCTTGA AACTTTGATT 16811 |||||||||| ||||||||| || | | |||||||| |||||||||| |||||||| AACAGCGTCA AGGTTTTTGT CATGCTCGCC AACGTTGCAT GAAACCTTGA AACTTTGACA 300 ACGCCTTCCG TGGAGGAAAA GTTGAGAGGG TTTTGATAAC AAGGATGAGT TGGTGGTGGT 16871 |||||||| ||||||||| |||||||||| ||||||||| || | |||| | || |||| GCGCCTTCCA TGGAGGAAAG GTTGAGAGGG TTTTGATAAG AAAGTAGAGT GGTTGTTGGT 360 GAAGGAAGAA GAGAGGGATT TGTTGGTGCA TAAAGGAAGA GTAGTAGTA 16920 ||||| |||| |||||||||| |||||||| | ||| | || |||| || GAAGGGAGAA GAGAGGGATT TGTTGGTGGA TAATAAAGGA AGAGTATTA 409 hqPGS_C08HBa0336I24.1+_SGN-E337083- (16515 16920) ******************************************************************************** EST sequence 326 -strand 423 n (File: SGN-E320713-) 1 AGGGGGGCGG ATGCGGAGTT TAGTCATAGA AGGGAACTTG TAGTACGGAA CACTATCGAT 61 ATCATCGGGT ACAGGAGGGC AACAACTGTA TATTACATCA ACACCTTCTT NTACATGGGC 121 AGTACCACAA GACTTGAGAT CAGGAGGTGG TATAGGTGCA GCAGTCGCTA ATGGTGCAAG 181 ATTAGCTGCA CCATAAAGAC TCCCTAACCC TAAAAGAACG TTTCGTCTAT CAACAGCGTC 241 AGGGTTTTTG TCAACGTTGT TTGCGTTGCA TGAAACCTTG AAACTTTGAT TACGCCTTCC 301 GTGGAGGAAA AGTTGAGAGG GTTTTGATAA CAAGGATGAG TTGGTGGTGG TGAAGGAAGA 361 AGAGAGGGAT TTGTTGGTGC ATAAAGGAAG AGTAGTAGTA ATAGAAGAAG AAGAAGACAT 421 TGT Predicted gene structure (within gDNA segment 15911 to 17543): Exon 1 16521 16943 ( 423 n); cDNA 1 423 ( 423 n); score: 0.993 MATCH C08HBa0336I24.1+ SGN-E320713- 0.993 423 1.000 C PGS_C08HBa0336I24.1+_SGN-E320713- (16521 16943) Alignment (genomic DNA sequence = upper lines): AGGGGGGCGG ATGCGGAGTT TAGTCATAGA AGGGAACTTG TAGTACGGAA CACTATCGAT 16580 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGGGGCGG ATGCGGAGTT TAGTCATAGA AGGGAACTTG TAGTACGGAA CACTATCGAT 60 ATCATCGGGT ACAGGAGGGC AACAACTGTA TATTACATCA ACACCTTCTT TTACATGGGC 16640 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| ATCATCGGGT ACAGGAGGGC AACAACTGTA TATTACATCA ACACCTTCTT NTACATGGGC 120 AGTACCACAA GACTTGAGAT CAGGAGGTGG TATAGGTGCA GCAGTCGCTA ATGGTGCAAG 16700 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTACCACAA GACTTGAGAT CAGGAGGTGG TATAGGTGCA GCAGTCGCTA ATGGTGCAAG 180 ATTAGCTGCA CCATAAAGAC CTCCTAACCC TAAAAGAACG TTTCGTCTAT CAACAGCGTC 16760 |||||||||| |||||||||| |||||||| |||||||||| |||||||||| |||||||||| ATTAGCTGCA CCATAAAGAC TCCCTAACCC TAAAAGAACG TTTCGTCTAT CAACAGCGTC 240 AGGGTTTTTG TCAACGTTGT TTGCGTTGCA TGAAACCTTG AAACTTTGAT TACGCCTTCC 16820 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGTTTTTG TCAACGTTGT TTGCGTTGCA TGAAACCTTG AAACTTTGAT TACGCCTTCC 300 GTGGAGGAAA AGTTGAGAGG GTTTTGATAA CAAGGATGAG TTGGTGGTGG TGAAGGAAGA 16880 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGGAGGAAA AGTTGAGAGG GTTTTGATAA CAAGGATGAG TTGGTGGTGG TGAAGGAAGA 360 AGAGAGGGAT TTGTTGGTGC ATAAAGGAAG AGTAGTAGTA ATAGAAGAAG AAGAAGACAT 16940 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAGAGGGAT TTGTTGGTGC ATAAAGGAAG AGTAGTAGTA ATAGAAGAAG AAGAAGACAT 420 TGT 16943 ||| TGT 423 hqPGS_C08HBa0336I24.1+_SGN-E320713- (16521 16943) ******************************************************************************** EST sequence 290 -strand 358 n (File: SGN-E317525-) 1 TCATAGGAGG GAACTTGTAG TACGGAGCGC TATCGATATC ATCGGGTACA GGAGGGCAAC 61 AACTGTATGA GACTTCAGTA CCTTTATCAT CTATATGGGC AGCACCTCAA GATTTGAGAT 121 CAGGTGGTGG TATAGGACCA GCAGAGGCTA ATGGTGCAAG ATTAGCTGCA CCATAGAAAC 181 CTCCTAACCG TAAAAGAACA TTTCTCCTAT CAACAGCGTC AAGGTTTTTG TCATGCTCGC 241 CAACGTTGCA TGAAACCTTG AAACTTTGAC AGCGCCTTCC ATGGAGGAAA GGTTGAGAGG 301 GTTTTGATAA GAAAGTAGAG TGGTTGTTGG TGAAGGGAGA AGAGATGGAT TTGTTGGT Predicted gene structure (within gDNA segment 15871 to 20111): Exon 1 16544 16898 ( 355 n); cDNA 1 358 ( 358 n); score: 0.841 MATCH C08HBa0336I24.1+ SGN-E317525- 0.841 355 0.992 C PGS_C08HBa0336I24.1+_SGN-E317525- (16544 16898) Alignment (genomic DNA sequence = upper lines): TCATAGAAGG GAACTTGTAG TACGGAACAC TATCGATATC ATCGGGTACA GGAGGGCAAC 16603 |||||| ||| |||||||||| |||||| | | |||||||||| |||||||||| |||||||||| TCATAGGAGG GAACTTGTAG TACGGAGCGC TATCGATATC ATCGGGTACA GGAGGGCAAC 60 AACTGTATAT TACATCAACA CC--T-TCTT TTACATGGGC AGTACCACAA GACTTGAGAT 16660 |||||||| || ||| | || | || | || |||||| || ||| ||| || ||||||| AACTGTATGA GACTTCAGTA CCTTTATCAT CTATATGGGC AGCACCTCAA GATTTGAGAT 120 CAGGAGGTGG TATAGGTGCA GCAGTCGCTA ATGGTGCAAG ATTAGCTGCA CCATAAAGAC 16720 |||| ||||| |||||| || |||| |||| |||||||||| |||||||||| ||||| | || CAGGTGGTGG TATAGGACCA GCAGAGGCTA ATGGTGCAAG ATTAGCTGCA CCATAGAAAC 180 CTCCTAACCC TAAAAGAACG TTTCGTCTAT CAACAGCGTC AGGGTTTTTG TCAACGTTGT 16780 ||||||||| ||||||||| |||| |||| |||||||||| | |||||||| ||| | | CTCCTAACCG TAAAAGAACA TTTCTCCTAT CAACAGCGTC AAGGTTTTTG TCATGCTCGC 240 TTGCGTTGCA TGAAACCTTG AAACTTTGAT TACGCCTTCC GTGGAGGAAA AGTTGAGAGG 16840 ||||||| |||||||||| ||||||||| |||||||| ||||||||| ||||||||| CAACGTTGCA TGAAACCTTG AAACTTTGAC AGCGCCTTCC ATGGAGGAAA GGTTGAGAGG 300 GTTTTGATAA CAAGGATGAG TTGGTGGTGG TGAAGGAAGA AGAGAGGGAT TTGTTGGT 16898 |||||||||| || | ||| | | || ||| |||||| ||| ||||| |||| |||||||| GTTTTGATAA GAAAGTAGAG TGGTTGTTGG TGAAGGGAGA AGAGATGGAT TTGTTGGT 358 hqPGS_C08HBa0336I24.1+_SGN-E317525- (16544 16898) ******************************************************************************** EST sequence 99 -strand 375 n (File: SGN-E325560-) 1 GGAACGCTAT CGATATCATC AGGTACAGGA GGCCAACAAC TGTATGAGAC TTCAGTACCT 61 TTATCATCTA TATGGGCAGC GCCACAAGAT TTGAGATCAG GTGGTGGTAT AGGAGCAGCA 121 GAGGCTAATG GTGCAAGATT AGCTGCACCA TAAAAACCTC CTAACCCTAA AAGAACATTT 181 CTCCTATCAA CAGCGTCAAG GTTTTTGTCA TGCTCGCCAA CGTTGCATGA AACCTTGAAA 241 CTTTGACAGC GCCTTCCATG GAGGAAAGGT TGAGAGGGTT TTGATAAGAA AGTAGAGTGG 301 TTGTTGGTGA AGGGAGAAGA GAGGGATTTG TTGGTGGATA ATAAAGGAAG AGTATTAGGA 361 GTAGAAGAAG ACATT Predicted gene structure (within gDNA segment 14847 to 19329): Exon 1 16567 16941 ( 375 n); cDNA 1 375 ( 375 n); score: 0.833 MATCH C08HBa0336I24.1+ SGN-E325560- 0.833 375 1.000 C PGS_C08HBa0336I24.1+_SGN-E325560- (16567 16941) Alignment (genomic DNA sequence = upper lines): GGAACACTAT CGATATCATC GGGTACAGGA GGGCAACAAC TGTATATTAC ATCAACACC- 16625 ||||| |||| |||||||||| ||||||||| || ||||||| ||||| || ||| ||| GGAACGCTAT CGATATCATC AGGTACAGGA GGCCAACAAC TGTATGAGAC TTCAGTACCT 60 -T-TCTTTTA CATGGGCAGT ACCACAAGAC TTGAGATCAG GAGGTGGTAT AGGTGCAGCA 16683 | || | || |||||||| |||||||| |||||||||| | |||||||| ||| |||||| TTATCATCTA TATGGGCAGC GCCACAAGAT TTGAGATCAG GTGGTGGTAT AGGAGCAGCA 120 GTCGCTAATG GTGCAAGATT AGCTGCACCA TAAAGACCTC CTAACCCTAA AAGAACGTTT 16743 | ||||||| |||||||||| |||||||||| |||| ||||| |||||||||| |||||| ||| GAGGCTAATG GTGCAAGATT AGCTGCACCA TAAAAACCTC CTAACCCTAA AAGAACATTT 180 CGTCTATCAA CAGCGTCAGG GTTTTTGTCA ACGTTGTTTG CGTTGCATGA AACCTTGAAA 16803 | ||||||| |||||||| | |||||||||| | | |||||||||| |||||||||| CTCCTATCAA CAGCGTCAAG GTTTTTGTCA TGCTCGCCAA CGTTGCATGA AACCTTGAAA 240 CTTTGATTAC GCCTTCCGTG GAGGAAAAGT TGAGAGGGTT TTGATAACAA GGATGAGTTG 16863 |||||| | ||||||| || ||||||| || |||||||||| ||||||| || | |||| | CTTTGACAGC GCCTTCCATG GAGGAAAGGT TGAGAGGGTT TTGATAAGAA AGTAGAGTGG 300 GTGGTGGTGA AGGAAGAAGA GAGGGATTTG TTGGTGCATA AAGGAAGAGT AGTAGTAATA 16923 || |||||| ||| |||||| |||||||||| |||||| || || ||| | || |||| || TTGTTGGTGA AGGGAGAAGA GAGGGATTTG TTGGTGGAT- AATAAAG-GA AG-AGTATTA 357 GAAGAAGAAG AAGACATT 16941 | || ||||| |||||||| GGAGTAGAAG AAGACATT 375 hqPGS_C08HBa0336I24.1+_SGN-E325560- (16567 16941) ******************************************************************************** EST sequence 161 -strand 311 n (File: SGN-E281487-) 1 TGTATGAGAC TTCAGTACCT TTATCATCTA TATGGGCAAC ACCACAAGAT TTGAGATCAG 61 GTGGTGGTAT AGGAGCAGCA GAGGCTAATG GTGCAAGATT AGCTGCACCA TAAAAACCTC 121 CTAACCCTAA AAGAACATTT CTCCTATCAA CAGCGTCAAG GTTTTTGTCA TGCTCGCCAA 181 CGTTGCATGA AACCTTGAAA CTTTGACAGC GCCTTCCATG GAGGAAAGGT TGACGTGGTT 241 TTGATAAGAA AGTAGAGTGG TTGTTGGTGA AGGGAGAAGA GAGGGATTTG TTGGTGGATA 301 ATAACTCGTG C Predicted gene structure (within gDNA segment 15247 to 19089): Exon 1 16644 16913 ( 270 n); cDNA 41 309 ( 269 n); score: 0.848 MATCH C08HBa0336I24.1+ SGN-E281487- 0.848 270 0.868 C PGS_C08HBa0336I24.1+_SGN-E281487- (16644 16913) Alignment (genomic DNA sequence = upper lines): ACCACAAGAC TTGAGATCAG GAGGTGGTAT AGGTGCAGCA GTCGCTAATG GTGCAAGATT 16703 ||||||||| |||||||||| | |||||||| ||| |||||| | ||||||| |||||||||| ACCACAAGAT TTGAGATCAG GTGGTGGTAT AGGAGCAGCA GAGGCTAATG GTGCAAGATT 100 AGCTGCACCA TAAAGACCTC CTAACCCTAA AAGAACGTTT CGTCTATCAA CAGCGTCAGG 16763 |||||||||| |||| ||||| |||||||||| |||||| ||| | ||||||| |||||||| | AGCTGCACCA TAAAAACCTC CTAACCCTAA AAGAACATTT CTCCTATCAA CAGCGTCAAG 160 GTTTTTGTCA ACGTTGTTTG CGTTGCATGA AACCTTGAAA CTTTGATTAC GCCTTCCGTG 16823 |||||||||| | | |||||||||| |||||||||| |||||| | ||||||| || GTTTTTGTCA TGCTCGCCAA CGTTGCATGA AACCTTGAAA CTTTGACAGC GCCTTCCATG 220 GAGGAAAAGT TGAGAGGGTT TTGATAACAA GGATGAGTTG GTGGTGGTGA AGGAAGAAGA 16883 ||||||| || ||| |||| ||||||| || | |||| | || |||||| ||| |||||| GAGGAAAGGT TGACGTGGTT TTGATAAGAA AGTAGAGTGG TTGTTGGTGA AGGGAGAAGA 280 GAGGGATTTG TTGGTGCATA AAGGAAGAGT 16913 |||||||||| |||||| || || | || GAGGGATTTG TTGGTGGAT- AATAACTCGT 309 hqPGS_C08HBa0336I24.1+_SGN-E281487- (16644 16913) ******************************************************************************** EST sequence 305 -strand 186 n (File: SGN-E289925-) 1 TCAGGTGGTG GTATAGGAGC AGCAGAGGCT AATGGTGCAA GATTAGCTGC ACCATAAAAA 61 CCTCCTAACC CTAAAAGAAC ATTTCTCCTA TCAACAGCGT CAAGGTTTTT GTCATGCTCG 121 CAAACGTTGC ATGAAACCTT GAAACTTTGA CAGCGCCTTC CATGGAGGAA AGGTTGAGAG 181 GGTTTT Predicted gene structure (within gDNA segment 15807 to 18399): Exon 1 16660 16845 ( 186 n); cDNA 1 186 ( 186 n); score: 0.882 MATCH C08HBa0336I24.1+ SGN-E289925- 0.882 186 1.000 C PGS_C08HBa0336I24.1+_SGN-E289925- (16660 16845) Alignment (genomic DNA sequence = upper lines): TCAGGAGGTG GTATAGGTGC AGCAGTCGCT AATGGTGCAA GATTAGCTGC ACCATAAAGA 16719 ||||| |||| ||||||| || ||||| ||| |||||||||| |||||||||| |||||||| | TCAGGTGGTG GTATAGGAGC AGCAGAGGCT AATGGTGCAA GATTAGCTGC ACCATAAAAA 60 CCTCCTAACC CTAAAAGAAC GTTTCGTCTA TCAACAGCGT CAGGGTTTTT GTCAACGTTG 16779 |||||||||| |||||||||| |||| ||| |||||||||| || ||||||| |||| | | CCTCCTAACC CTAAAAGAAC ATTTCTCCTA TCAACAGCGT CAAGGTTTTT GTCATGCTCG 120 TTTGCGTTGC ATGAAACCTT GAAACTTTGA TTACGCCTTC CGTGGAGGAA AAGTTGAGAG 16839 |||||| |||||||||| |||||||||| ||||||| | |||||||| | |||||||| CAAACGTTGC ATGAAACCTT GAAACTTTGA CAGCGCCTTC CATGGAGGAA AGGTTGAGAG 180 GGTTTT 16845 |||||| GGTTTT 186 hqPGS_C08HBa0336I24.1+_SGN-E289925- (16660 16845) ******************************************************************************** EST sequence 171 -strand 259 n (File: SGN-E281327-) 1 GAGGCTAATG GTGCAAGATT AGCTGCACCA TAAAAACCTC CTAACCCTAA AAGAACATTT 61 CTCCTATCAA CAGCGTCAAG GTTTTTGTCA TGCTCGCCAA CGTTGCATGA AACCTTGAAA 121 CTTTGACAGC GCCTTCCATG GAGGAAAGGT TGAGAGGGTT TTGATAAGAA AGTAGAGTGG 181 TTGTTGGTGA AGGGAGAAGA GAGGGATTTG TTGGTGGATA ATAAAGGAAG AGTATTAGGA 241 GTAGAAGAAG ACCTCGTGC Predicted gene structure (within gDNA segment 16047 to 19369): Exon 1 16687 16944 ( 258 n); cDNA 4 258 ( 255 n); score: 0.853 MATCH C08HBa0336I24.1+ SGN-E281327- 0.853 258 0.996 C PGS_C08HBa0336I24.1+_SGN-E281327- (16687 16944) Alignment (genomic DNA sequence = upper lines): GCTAATGGTG CAAGATTAGC TGCACCATAA AGACCTCCTA ACCCTAAAAG AACGTTTCGT 16746 |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| ||| |||| GCTAATGGTG CAAGATTAGC TGCACCATAA AAACCTCCTA ACCCTAAAAG AACATTTCTC 63 CTATCAACAG CGTCAGGGTT TTTGTCAACG TTGTTTGCGT TGCATGAAAC CTTGAAACTT 16806 |||||||||| ||||| |||| ||||||| | | ||| |||||||||| |||||||||| CTATCAACAG CGTCAAGGTT TTTGTCATGC TCGCCAACGT TGCATGAAAC CTTGAAACTT 123 TGATTACGCC TTCCGTGGAG GAAAAGTTGA GAGGGTTTTG ATAACAAGGA TGAGTTGGTG 16866 ||| |||| |||| ||||| |||| ||||| |||||||||| |||| || | |||| | || TGACAGCGCC TTCCATGGAG GAAAGGTTGA GAGGGTTTTG ATAAGAAAGT AGAGTGGTTG 183 GTGGTGAAGG AAGAAGAGAG GGATTTGTTG GTGCATAAAG GAAGAGTAGT AGTAATAGAA 16926 ||||||||| ||||||||| |||||||||| ||| || || ||| | || |||| ||| | TTGGTGAAGG GAGAAGAGAG GGATTTGTTG GTGGAT-AAT AAAG-GAAG- AGTATTAGGA 240 GAAGAAGAAG ACATTGTG 16944 | |||||||| || | ||| GTAGAAGAAG ACCTCGTG 258 hqPGS_C08HBa0336I24.1+_SGN-E281327- (16687 16944) ******************************************************************************** EST sequence 281 -strand 780 n (File: SGN-E543331-) 1 CAACTACAAT AACAATGTTT TCGCGTTTAA ATTGTTAGAA CCGGAAATAA GCAGGGTAAA 61 CGCGGAAAGC TAGCAAAGCA AACCTCAAAA GACCACGAGT ATGAAAGACA ACGAGAAATA 121 TACCAAAAGA CACAAAGATT TAACGTGGTT CGGTCAATCG ACCTACGTCC ACAATGGAGA 181 TGAGCAATCC ACTATTAATA TGAGAGTACA AAATACAGAG AGAAACAACC TCAACCAATT 241 CACTAAGAAT ACACGGGAAC ATTTTCCTAC CAGAAAAAGA ATTAGTCAAT TCAAAACTTT 301 TTTCCTAAAA GAAAAACCTA TTTATGATAA GAAATTTAGG ACAAAATAAA ATCCAACATA 361 AATGATGTAA TTATACAATT CATATCATCA GACAATGGTT CATGGATCCA AAATCTTGAA 421 TGATTCCATT TTGGTTTGAG CTCAAACATC ACCATCTATA TAACTAAAAC TCGTCGAAAT 481 TGACTCAACC TGCTCATCTG ACACTTGAAA ATTCGAGACT CAAATTTAAT CATTAAGATG 541 AATTTTGTGA ATTTAAATAC CTTTTGCACG AAATGTACGC TGATAAAGCA TTTTAAGTGT 601 TTTTGAGGAG TAGCAGACGA AGCAATAGCG GATGGTAATG GTGATGGACA ATCATTGATC 661 CTTAACGAAG TTGCTCGAAT TCCTTCAGAA ATTTCCTCCA TAGTAAATTG TGATTTGATT 721 AATTATTGGC TCAAATAAAC AAGAAAATGG ATGAACAAGA ACTAATTAAG CATGTTTATG Predicted gene structure (within gDNA segment 22881 to 31170): Exon 1 24539 24755 ( 217 n); cDNA 40 257 ( 218 n); score: 0.885 Intron 1 24756 24891 ( 136 n); Pd: 0.000 (s: 0.90), Pa: 0.000 (s: 0.79) Exon 2 24892 25012 ( 121 n); cDNA 258 381 ( 124 n); score: 0.736 Intron 2 25013 26940 (1928 n); Pd: 0.900 (s: 0.62), Pa: 0.000 (s: 0) Exon 3 26941 26962 ( 22 n); cDNA 382 402 ( 21 n); score: 0.773 Intron 3 26963 27781 ( 819 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0) Exon 4 27782 27797 ( 16 n); cDNA 403 417 ( 15 n); score: 0.688 Intron 4 27798 29571 (1774 n); Pd: 0.986 (s: 0), Pa: 0.992 (s: 0) Exon 5 29572 29602 ( 31 n); cDNA 418 449 ( 32 n); score: 0.710 MATCH C08HBa0336I24.1+ SGN-E543331- 0.831 407 0.522 C PGS_C08HBa0336I24.1+_SGN-E543331- (24539 24755,24892 25012,26941 26962,27782 27797,29572 29602) Alignment (genomic DNA sequence = upper lines): ACCGAAAATA AGCAGGTGTA TATGCGG-AA GCTAGCAACG CAAATTTCGA AAGACCATGA 24597 |||| ||||| |||||| ||| | |||| || |||||||| | |||| || | ||||||| || ACCGGAAATA AGCAGG-GTA AACGCGGAAA GCTAGCAAAG CAAACCTCAA AAGACCACGA 98 GTAAG-AAGA CAATGAGAAA TATACCAAAA GACACAAACA TTTAACGTGG TTCGGTCAAT 24656 ||| | |||| ||| |||||| |||||||||| |||||||| | |||||||||| |||||||||| GTATGAAAGA CAACGAGAAA TATACCAAAA GACACAAAGA TTTAACGTGG TTCGGTCAAT 158 CGACCTACGT CCACAAAGGA GATGAGCAAT CCACCATAAA TATGAGAGTA CAAAATACAG 24716 |||||||||| |||||| ||| |||||||||| |||| || || |||||||||| |||||||||| CGACCTACGT CCACAATGGA GATGAGCAAT CCACTATTAA TATGAGAGTA CAAAATACAG 218 AGGGAAACAA CCTCAACCGA TTCACCCAGA ATACATGGGA GGTTCACACA AGTGATAACG 24776 || ||||||| |||||||| | ||||| ||| ||||| ||| AGAGAAACAA CCTCAACCAA TTCACTAAGA ATACACGGG. .......... .......... 257 TATCAAGCTT GTGACCCACA AATTCTCCCC CTAACCAAAA CTCTCAAAAC CCTTAAGACT 24836 .......... .......... .......... .......... .......... .......... 257 ACATTGTGAA TGCTAATTAA GTTAGAAGGA ACATGACTCT ATTTATAGAG TCCTAAACCT 24896 ||| | .......... .......... .......... .......... .......... .....AACAT 262 TTTCCTACAA G-AAAAGGAT TAGTCAATCC AAAAC-ATTT TCCTACAAGG AAAACCTATT 24954 |||||||| | | ||||| || |||||||| | ||||| ||| ||||| ||| |||||||||| TTTCCTACCA GAAAAAGAAT TAGTCAATTC AAAACTTTTT TCCTAAAAGA AAAACCTATT 322 TATGGTAACA AATTTAGGGC -AAATAAAAC CCAACAGTGT ATACTATACG T-CATAATTT 25012 |||| ||| | |||||||| | |||||||| |||||| | || | || | | |||| TATGATAAGA AATTTAGGAC AAAATAAAAT CCAACA-TAA ATGATGTAAT TATACAATTC 381 ATATCCTGCG AATATTATGT ATCAGTGTTT TGTATTGGGA ACCGAGTTTG TTTCGCAAGG 25072 .......... .......... .......... .......... .......... .......... 381 CCTACAAGAT TAATAAAATT AAACAGAGGT CGTCACTAAC AGTAAGAGTG GAAGACAACA 25132 .......... .......... .......... .......... .......... .......... 381 TAGTGAATTA TCGACATAGT AATTAGTCCA GAATTTCAGA TATGACTTAT CATTGGTATT 25192 .......... .......... .......... .......... .......... .......... 381 AAAAAAATCT TTTACAATAA TCCTAAATCC TAATCATGAA AAGTAAGTGC CTCATAATTT 25252 .......... .......... .......... .......... .......... .......... 381 TATCCCTTCG ACGAATTTTT ATTATGATCA ATGCCCCACT AGCTAAATAG GCGTAAGAAA 25312 .......... .......... .......... .......... .......... .......... 381 AAGTTATCTG AATAACGTTC ATCCGAATTG AGTTCCTGAG ATTTCAAAAA CATAGAAACG 25372 .......... .......... .......... .......... .......... .......... 381 GGGATTAAGA AAAAAAAAGT AATAGAATAG AGTGCAGAAA TTTACATATT AGAAGATTAA 25432 .......... .......... .......... .......... .......... .......... 381 GAAAATGATT TCCCCCCTCT TCAGATTAGC TTAATCAGAA TAGACAATAT AAATATTTAG 25492 .......... .......... .......... .......... .......... .......... 381 AATTTAGATT AGATTTTAGA GAATATGAAA TGATGGGTTA ATAGAAAATG GTAATTATTA 25552 .......... .......... .......... .......... .......... .......... 381 GGACACTTAT TGTTTTAAAT TATAATTAAA AGGAAGAGGA TAAATTGGAT ACATTGTAAT 25612 .......... .......... .......... .......... .......... .......... 381 TAAATAAGAT AAAAATTTCA GTGCGGCTTA CATCGAGTTT ATTTAATGAA ATAAAATATA 25672 .......... .......... .......... .......... .......... .......... 381 TGTCAATTAA TTATGATTAA ATAAAATAAA TTATAAATTT AAACACGTGA CATATATTTA 25732 .......... .......... .......... .......... .......... .......... 381 TTAACTTGAT ATAAATATTC TATACCAATA AGTTTTATCC TATATATAGA TGTTGTATGT 25792 .......... .......... .......... .......... .......... .......... 381 TTTTTTTCAT TTTATTTGAT CCCTATATTC AAAATAAAAA TTTTATTTTT ATTTATTTAT 25852 .......... .......... .......... .......... .......... .......... 381 TTTAATCATT CTAGATAATA TCTTTTTCAT TCATTTACTT TTGTTTGTTC ACAATGCACT 25912 .......... .......... .......... .......... .......... .......... 381 TTACACTTTC TTTTTTTTTA AAAAAGACTA CGTAATAAAT AAAGTACTTA GTATAATTAT 25972 .......... .......... .......... .......... .......... .......... 381 AATGACTATT AACATTTCAA AAGTTCTTTT GAAAAATTAT TTAAGATATT AAAAATTAGT 26032 .......... .......... .......... .......... .......... .......... 381 TAATGTAAGC ATTAAGAATT AGTTGAGTCA ATTTAAGTGC ATATTGTCAA GTATTGGAAT 26092 .......... .......... .......... .......... .......... .......... 381 GGTAGGTTGG GCTAATATAT AATCATTTTA CCTATCAAAT TAAATTATAC AACTACTTAC 26152 .......... .......... .......... .......... .......... .......... 381 ATGACCTAAA AGATGTGAAA CAATAAAAGG ACCTTTTCGT ACTTACAATA ATGATATAGT 26212 .......... .......... .......... .......... .......... .......... 381 CCCATGGATT ATATATTAAT GTATTATATA GTTTTGCCCA CAATAATTTA GTAGGGTGTA 26272 .......... .......... .......... .......... .......... .......... 381 TAAAAATAAT ATTAAATATA ATATAATAAT AGTATTGAAT ATTAATATTA GTAATATAAA 26332 .......... .......... .......... .......... .......... .......... 381 TATTACTTAT GTTTATATTA ATTATGTTAA AAATATTTTT TACGTTATAT TTAATTTGAT 26392 .......... .......... .......... .......... .......... .......... 381 ATATTAAAAA TAACATGTAT TATATAATAT TTTATTTTAA AAAAATATTT AATTACAAAA 26452 .......... .......... .......... .......... .......... .......... 381 ATATAATCCA TAAATACGTG AAAAGGTGTG AGAAAAAGTT TTCAAGGGAC AAAACATTAA 26512 .......... .......... .......... .......... .......... .......... 381 ATACACTAAA CTAATCAAGT AATACATTTA TGCTAAATGA TCAGAATTTG GGTAGAATTT 26572 .......... .......... .......... .......... .......... .......... 381 TTTTTAAAAA TATTTTTTAA TTATAAAATA ACAAGAATAT TATAGTCTTT TTAATTTTCT 26632 .......... .......... .......... .......... .......... .......... 381 TGCCAAATAC TGATCAATTT TTTTCTTTCT TTCTATACTA TGTTGAATAT GCACCAATTA 26692 .......... .......... .......... .......... .......... .......... 381 TAATGAAATC CAGCTACTCC CTCCGTTCAC AATTATATGT CATATTACGG TTATTTATAT 26752 .......... .......... .......... .......... .......... .......... 381 ATTCCTTAAC AAAAATTTAA TATAGGGTGT AATTTGATTA ATATAATTCT ATTATAACAA 26812 .......... .......... .......... .......... .......... .......... 381 GAATATCAAA AGTCTACATA TCTATCTAAT TAAACTAAAC TATCATTAAG AGCAAATTTT 26872 .......... .......... .......... .......... .......... .......... 381 TTTTAAAAAT AATTAATTAC TTTTTAATTA TTTAAATTAA CAATTAATCT TAAACATATA 26932 .......... .......... .......... .......... .......... .......... 381 TTTTTAATAT ATCTATCAAA CAATTGTGGA CGAAGAAAAT ACAAAGCTCG AACAAGATAA 26992 || ||| |||| | |||| || | ........AT ATC-ATCAGA CAATGGTTCA .......... .......... .......... 402 GATAACAAGC TTTTAAGGCC GCTCAACGTG GTTGGTGGCC TAGACAATAC ATAATGAGTC 27052 .......... .......... .......... .......... .......... .......... 402 CGAAAATGCA ATTAATACAA GAATTATTAC TATTATGTTA CAAGCAATAT ACAAATTTGG 27112 .......... .......... .......... .......... .......... .......... 402 AATATAGTCA AGTTTTTTTG GTAAAACTCT TATCAGGTAT GTCAATTAAA ATATTTATAT 27172 .......... .......... .......... .......... .......... .......... 402 TTTACTTATA TTATTTTTAA TAGGATAACT TTCACATATA GCAAATAAAA AATTCATATT 27232 .......... .......... .......... .......... .......... .......... 402 TGTATGATAT AGCAAAATTT GTGTAATTAC GCTCCATAGC AAACATAAAA ACTGTATAAT 27292 .......... .......... .......... .......... .......... .......... 402 TCGCTATACA TATACAATAG CAAACTGTAT AAAATAAAGT GTATAAAACA AGAAAGAGAA 27352 .......... .......... .......... .......... .......... .......... 402 AGACACTTGG CCAGAAAACT GTATAAAAAC GAGGTGTATA AAACAAATTG TATTATTATA 27412 .......... .......... .......... .......... .......... .......... 402 AGTGTATAGA ACGATTATAT ACAATTTGAA TTTGTATAAA ATGAGAAAGA GAGAAAGACA 27472 .......... .......... .......... .......... .......... .......... 402 AAAAGAGACT TGACAAGGAT ATACAATTGA ATTGAATTGT ATAGAACGAG AAAGAGATAA 27532 .......... .......... .......... .......... .......... .......... 402 ATTAGACACA ATTTTGAAAA TTTTATAAAA CGAGAAAGAG ATAAAGGCAA AAGAAACTGG 27592 .......... .......... .......... .......... .......... .......... 402 GGAGCATTTT TATTGTATGA TTATAAGTGT ATAGGACGAA AATATATGTA CTTGCATGTG 27652 .......... .......... .......... .......... .......... .......... 402 TATATACAAT TTTCTCACGC TTTATACAAA CAGAAACACA ATTTGTACAT TTCGCTTCTA 27712 .......... .......... .......... .......... .......... .......... 402 TTTGTATAAG TGAGAAAGAC GAGCGAGATT TGGGAGAGTG GCGAGCGAGA TCTGGAAGAG 27772 .......... .......... .......... .......... .......... .......... 402 GGGAGAGAGA GGAACAAAAA TATATGTATT TATACAATTT TCTCTGCTTT ATACAATTAG 27832 ||| | |||| | | | .........T GGATCCAAAA TCT-T..... .......... .......... .......... 417 AAACAAATTT TATACACTTG TATTTGTATA AAAAGTGAGG AAGCGAGTGA GAGATTGGAG 27892 .......... .......... .......... .......... .......... .......... 417 GAGAGTGGCG AGCGAGATAT TTGGGGGAGA GGCGCCTGAC AATTTTTTGC AAACATTTGC 27952 .......... .......... .......... .......... .......... .......... 417 TATGGAGCAC AATTAAATCA AACCCTAGCT ACTCCATTTA TTTTAGGTTA TTAATTTGCT 28012 .......... .......... .......... .......... .......... .......... 417 ATATATATAT ATACAAATTT TCCTTTTTAA TTTGTGATAT GGGTCATTTA TATTATAAAT 28072 .......... .......... .......... .......... .......... .......... 417 AGAGGTATAT GTGAGTAACT TCGACAATAA GAATTATCTT AATTTTAAAT CGCAAAATTA 28132 .......... .......... .......... .......... .......... .......... 417 AAGAATATAT CATGTCCTTT TTTCTACTTT AATTATAAAT TAGTTCTAAC TATCGATATT 28192 .......... .......... .......... .......... .......... .......... 417 TAAGTAACAT TATGTCAAAA AAATCGTGAT TAAGACATGT TTGTTTAGCT GATCTTCACC 28252 .......... .......... .......... .......... .......... .......... 417 TTGTGATTTT GGAGTTTTTT TTACCACTAA AGAAAATACT ATCAAAACAA ATCATATGCT 28312 .......... .......... .......... .......... .......... .......... 417 TTGAATTGTT CAAAATCAAT TTTTGTTTGT TAGAACTTTT TTAGATGTAT GGTTATTAAT 28372 .......... .......... .......... .......... .......... .......... 417 AACCCTTTTA TAACAGATTT TGTCAATTGA TAATTTATAT ATTATTGATA TTAATTATTA 28432 .......... .......... .......... .......... .......... .......... 417 GGTAATTTTT GTGAGTTCTA ATTTTAAAAA GTTCTTTCGG AAAATGCAAC TAATACAAAT 28492 .......... .......... .......... .......... .......... .......... 417 ATTATGTTTC AAGCAATGAA GCAACACATA AATTTGGAGA ATAGTAAAGT TCTTTTCAAA 28552 .......... .......... .......... .......... .......... .......... 417 AAAATATCTT ATCATGTATA TCAATTAAAA TATTTATATT TTACTTGTAT CTTATTTGAT 28612 .......... .......... .......... .......... .......... .......... 417 TTGTGATTTA AGTTATTTAT GTTATAAGTA GAGCTATATA TGAATCTCTT TTACAAAAAA 28672 .......... .......... .......... .......... .......... .......... 417 GAATATATCA GTTCTATATT GCAAAATTGA AGGGTATATT CTACCTTTTT TCCTATTATT 28732 .......... .......... .......... .......... .......... .......... 417 AAGAAATTTT AAATTATAAA TTAGTTCAAA CTATCAACAT CTAAGTAACA TTATGTCCAA 28792 .......... .......... .......... .......... .......... .......... 417 ATTTTTTTGA TTAAGAAATG TTTGTTTGGC TGATCTTCAC CTTGTGATTT GTATTTCTTT 28852 .......... .......... .......... .......... .......... .......... 417 TACCACTAAA AAAGAATCAT ATGTTTTGAA GTGTTCAAAT CAATTTTAAT TTCTTTATTC 28912 .......... .......... .......... .......... .......... .......... 417 AAAAAACTTA ATATTATATT TTTATTAAAA AATTAAATAT TATATATTCT TTAACTATAA 28972 .......... .......... .......... .......... .......... .......... 417 AATACTTTTT TAATTTTTTT TTTTGTAAAT CTACTATTAC TTTTTTTAAA AAAAAAATTG 29032 .......... .......... .......... .......... .......... .......... 417 CACGACCAGC ATTAAAAGCT TGAAATAGTA AACATGATAT AATTGAAGTC ATGTTATGTA 29092 .......... .......... .......... .......... .......... .......... 417 AAGAATTTTG ACAGAATGAA TCTTTTGTCT AGCTTTTCCT TTGATATTTA TCTGTTTTAG 29152 .......... .......... .......... .......... .......... .......... 417 AATCGAATTT GCATTCGTTC GTGACTTGTG AGACTAAAGT TGAAAATTAT TAAAATTTTC 29212 .......... .......... .......... .......... .......... .......... 417 GCATTAAAGT TAGAAGCAAA ATTCAATCTA ACTTCAATTA TCGCATTAAA ATTTAAATTC 29272 .......... .......... .......... .......... .......... .......... 417 TGAAGGGACA ATAACATAAA TAGTCATTTG ACTCTTGAAA TATCATCTAA CCACACTAAT 29332 .......... .......... .......... .......... .......... .......... 417 TTGAATTACA AATGGTAACT ATTTCTTTTA TATTTGTTAA AAAGAAAAAG ATCCAGACCT 29392 .......... .......... .......... .......... .......... .......... 417 AGCTCATTCA TTTTCGTTTA TGATTGTTGC CCAATTGAAT TTTACCTTCT CAAAAAAATA 29452 .......... .......... .......... .......... .......... .......... 417 CAACAATCTC ATTCTAGTGC AAATGATACT CTTTTAGGTT TAAAAAAGAT ATAACTTATA 29512 .......... .......... .......... .......... .......... .......... 417 GATATTATTA TGTATAAAAT TGTAATATAT ACATGATTGT CATTCTTTAT GCTTTGTAGG 29572 | .......... .......... .......... .......... .......... .........G 418 AAATGATACC -TTAGGGTTT GAGC-CAAAC AT 29602 |||||| || || ||||| |||| ||||| || -AATGATTCC ATTTTGGTTT GAGCTCAAAC AT 449 hqPGS_C08HBa0336I24.1+_SGN-E543331- (24539 24755,24892 25012,26941 26962,27782 27797,29572 29602) ******************************************************************************** EST sequence 117 -strand 747 n (File: SGN-E211090-) 1 CCCATATCAA CGGCTGGATT CAAGCTCTGC CCACAGTCGT AAATAATATC AGATTGCAAA 61 ATGGTAGTCT CTCCGGTCAG GATATCAATC TCCACCTCAC TGACAGCAGC ACCAAAGTTC 121 AAATAACTCG TAAAATCAGA TTCTGGTACA TAATAAGAAT TTGCTGCTAA GTTTACTGAT 181 TCCATTTGTG CCTGCAAAAA GAAGGGGGTG GAGGGACAGA ACTGCAAACT CAGATATGTT 241 AGGACCGAAA ATAAGCAGGT GTAAACGCGG AAGCTAGCAA TACAAACCTC GAAAGACCAC 301 GAGTAAGAAG ACAACGAGAA ATATATCAAA AGACACAAAG ATTTAACGTG GTTCGGTCAA 361 TCAACCTACG TCCACAAAGG AGATGAGCAA TCCACTATAA ATATAAGAGT ACAAAATACA 421 GAGAGAAACA ACCTCAACCA ATTCACTCAG AATACATGGG AGGTTCACAC AAGTGATAAC 481 ATATCAAGCT TGTGACCCAC AGATTCTCCC TCTAACCAAA ACTCTCAAAG CCTGTAAGAC 541 TACATTGTGA ATGCTGATTA AGTTAAAAGG AATATTCATC TATTTATAGA GTCCTAAACC 601 TTTTCCTACA AGAAAAGGAT TAGTCAATTC AAAACCTTTT CCTAAAAGGA AAACCTATTT 661 ATGGTAAGAA ATCAGGGCAA ATAAAATCCA ACAAGATACT TAAAAGATGA GCAAGAGTGG 721 CTAATGGATT TAAATTAACA AATTGTT Predicted gene structure (within gDNA segment 20626 to 26362): Exon 1 22812 22831 ( 20 n); cDNA 227 242 ( 16 n); score: 0.700 Intron 1 22832 24537 (1706 n); Pd: 0.378 (s: 0), Pa: 1.000 (s: 0.88) Exon 2 24538 24989 ( 452 n); cDNA 243 693 ( 451 n); score: 0.923 MATCH C08HBa0336I24.1+ SGN-E211090- 0.923 472 0.632 C PGS_C08HBa0336I24.1+_SGN-E211090- (22812 22831,24538 24989) Alignment (genomic DNA sequence = upper lines): AACTCGTGAT ATTTCTTTAG GTGAAGACAA AGAATTCCTC CAACAGTTTC AACTCTTCTT 22871 ||||| ||| || |||| AACTC-AGAT AT---GTTAG .......... .......... .......... .......... 242 TCTGCATGGT GGGAGTTGTG TTCTTTATTT AATCATAATT CATCGTTATT CGCAGTAGAT 22931 .......... .......... .......... .......... .......... .......... 242 CTTGTACCTG TTAAACTAGA TCCATGGGGT TATTAAATTT TTTTACAAGT TTAACAAAGA 22991 .......... .......... .......... .......... .......... .......... 242 TTGTATTTAA AAATATTATT TATTTAATTT TCTTAACTTT GTCGTCCGTC TTCTTTAATT 23051 .......... .......... .......... .......... .......... .......... 242 TTCGCATGTT TTTCTCTATT AAGATATGAG GGTTCTCCTA CTTAGGTGTT AGAGTGGGTG 23111 .......... .......... .......... .......... .......... .......... 242 TCCGCACGAT CCAATGGGTT AGGTCGTGAC AATAACAATA AGGTGTAAAG ACACATTCGT 23171 .......... .......... .......... .......... .......... .......... 242 AAAGTTAGAA GTAACACACA TAAGAAAACC GTAATTATAA ATGCAGGGGT CTGGGCGAAA 23231 .......... .......... .......... .......... .......... .......... 242 AATCATCGTA ATTGTTGTTG TTGCTACAAG GGGATGGAAC AAAGTGAAGG ATTCGATATG 23291 .......... .......... .......... .......... .......... .......... 242 TGTTTAAGCA AACTCTAGCA GGTTTAATTG GTAGCATTTC TGACTGGGTG TATGTATATT 23351 .......... .......... .......... .......... .......... .......... 242 GCGCGGGACT AAGAATGAAT AATGGACCGG CACGAATCGG TATCGGACAG AAACAGTACG 23411 .......... .......... .......... .......... .......... .......... 242 AATTGACTGA TACCGGAATA AATCGGATTG AAATTACCGG GACAACTACT CAATCTGTTC 23471 .......... .......... .......... .......... .......... .......... 242 CATTCCACTG TATATAGAGA TGGAACCGAA ACAAATCGGA CCGAACTGAA ATGGAACGGG 23531 .......... .......... .......... .......... .......... .......... 242 ATGGGATAAA CGGGATAACT CATCTAGTTA TTTCAAAAAA TGATTAAATT TTTTTTAGTT 23591 .......... .......... .......... .......... .......... .......... 242 CTTTTATTTT TTGAATTACG AAAATATGAA TATTTTTTTT ATTTTCTAAG TTTAAATTAA 23651 .......... .......... .......... .......... .......... .......... 242 TAGTTTTAAA ATTTATAATG TAATTTTTTA CTTAAGTTTA TTTTAAAGAT ATATTTTTAA 23711 .......... .......... .......... .......... .......... .......... 242 AATTTTTTAC TTATTAAGTT TGCAAGTTAA GTCTAATAAA GTTTTCTTTT TAAAAAAATA 23771 .......... .......... .......... .......... .......... .......... 242 TTTTTGAGAA TCTTTTGATG TTTATAAGTT TTTATTTATT AATATATTAT AACTTATAAT 23831 .......... .......... .......... .......... .......... .......... 242 GTATATTTAT AACTTGTAAT TTAAATAACT TAAATTTGTA TCTTTAAAAA ATTAAATAAA 23891 .......... .......... .......... .......... .......... .......... 242 TTATAATATA AATTAATGAA TAAAAAATAA TTAACTGAAA TCAAACCAAA ATAAATTATT 23951 .......... .......... .......... .......... .......... .......... 242 TGATATAAAG TATTAGATTT TTTTTTAAAA TAATTTATTT GATGACCGTA AAATGTGTCT 24011 .......... .......... .......... .......... .......... .......... 242 TTGTTATAAA AAAATGTTAA ATGTGAATAA CTTTGTCTCG ATGAGTATAA AATTCTCTAA 24071 .......... .......... .......... .......... .......... .......... 242 ATAGTTTTTT GTTTATTAAC ATGAGTCAAT GACATTTATA TTTCCCAAAT TATTATTGTA 24131 .......... .......... .......... .......... .......... .......... 242 AGATGCCATT AGGAGGTTAA TATTTATAAA TTAGAAAGAA TTTCAAAATA AATGATATAT 24191 .......... .......... .......... .......... .......... .......... 242 TAAAAGATAT TATTATTTTA TAATAGTAAT GAAAAAATAA TAAACTTAAT CAAAGAGAGA 24251 .......... .......... .......... .......... .......... .......... 242 TGTCATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT 24311 .......... .......... .......... .......... .......... .......... 242 AAAGTTGACT CTGCAAGGGC TAATGGGTTA CTAGAGACTT TTATTTGGGA TTCAGGCTCA 24371 .......... .......... .......... .......... .......... .......... 242 ATAACCATTT GTTAAATAAG ACTAGAAGTT AGAAGAACAG TTATGAAAAT TATGTGGAAG 24431 .......... .......... .......... .......... .......... .......... 242 CTTTGATTTC AGTCATCTCT GTTCTGGTGT CTCGTCCCCT TCTAGTTACC TTCTTCTATG 24491 .......... .......... .......... .......... .......... .......... 242 TAACCTATCT ATAATTAGTA TGTTATTACT TTGTTGTGTA TGTTAGGACC GAAAATAAGC 24551 |||| |||||||||| .......... .......... .......... .......... ......GACC GAAAATAAGC 256 AGGTGTATAT GCGGAAGCTA GCAACGCAAA TTTCGAAAGA CCATGAGTAA GAAGACAATG 24611 ||||||| | |||||||||| |||| |||| |||||||| ||| |||||| |||||||| | AGGTGTAAAC GCGGAAGCTA GCAATACAAA CCTCGAAAGA CCACGAGTAA GAAGACAACG 316 AGAAATATAC CAAAAGACAC AAACATTTAA CGTGGTTCGG TCAATCGACC TACGTCCACA 24671 ||||||||| |||||||||| ||| |||||| |||||||||| |||||| ||| |||||||||| AGAAATATAT CAAAAGACAC AAAGATTTAA CGTGGTTCGG TCAATCAACC TACGTCCACA 376 AAGGAGATGA GCAATCCACC ATAAATATGA GAGTACAAAA TACAGAGGGA AACAACCTCA 24731 |||||||||| ||||||||| |||||||| | |||||||||| ||||||| || |||||||||| AAGGAGATGA GCAATCCACT ATAAATATAA GAGTACAAAA TACAGAGAGA AACAACCTCA 436 ACCGATTCAC CCAGAATACA TGGGAGGTTC ACACAAGTGA TAACGTATCA AGCTTGTGAC 24791 ||| |||||| ||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| ACCAATTCAC TCAGAATACA TGGGAGGTTC ACACAAGTGA TAACATATCA AGCTTGTGAC 496 CCACAAATTC TCCCCCTAAC CAAAACTCTC AAAACCCTTA AGACTACATT GTGAATGCTA 24851 ||||| |||| |||| ||||| |||||||||| ||| || || |||||||||| ||||||||| CCACAGATTC TCCCTCTAAC CAAAACTCTC AAAGCCTGTA AGACTACATT GTGAATGCTG 556 ATTAAGTTAG AAGGAACATG ACTCTATTTA TAGAGTCCTA AACCTTTTCC TACAAGAAAA 24911 ||||||||| |||||| || |||||||| |||||||||| |||||||||| |||||||||| ATTAAGTTAA AAGGAATATT CATCTATTTA TAGAGTCCTA AACCTTTTCC TACAAGAAAA 616 GGATTAGTCA ATCCAAAACA TTTTCCTACA AGGAAAACCT ATTTATGGTA ACAAATTTAG 24971 |||||||||| || |||||| |||||||| | |||||||||| |||||||||| | ||| | || GGATTAGTCA ATTCAAAACC TTTTCCTAAA AGGAAAACCT ATTTATGGTA AGAAA-TCAG 675 GGCAAATAAA ACCCAACA 24989 |||||||||| | |||||| GGCAAATAAA ATCCAACA 693 hqPGS_C08HBa0336I24.1+_SGN-E211090- (24538 24989) ******************************************************************************** EST sequence 34 +strand 574 n (File: SGN-E206285+) 1 AACTAAGTAG AGCTATGTAT ATTTTGTCTG CAGAAGCAAG GGCTTAATTT ACAACTATAG 61 GTGGCGTACG TATAATGCAT GGACCGAAAA ATAAGCAGGT GTAAACGCGG AAGCTAGCAA 121 TGCTAACATC GAAAGACCAC GAGTAAGAAG ACAACGAGAA ATATACCAAA AGACACAAAG 181 ATTTAACGTG GTTCGGTCAA TCGACCTATG TCCACAAAGG AGATGAGCAA TCCACTATAA 241 ATATGAGAGT ACAAAATACA GAGGGAAACA ATCTCAACCA ATTCACTCAG AATACATGGG 301 AGGTTCACAC AAGTAATAAC GTATCAAGCT TGTGACCCAC AAATTCTCCC TCTAACCAAA 361 ACTCTCAAAG CCCTTAAGAC TACATTGTGA ATGTTAACTA AGTTAAAAGG AACATGCCTC 421 TATTTATAGA ATCCTAAACC TTTCCCTACA AGAAAAGGAT TAGTCAATCC AAAACCTTTT 481 CCTACAAGGA AAATCTATTT ATGGTAAGAA ATTTAGAGCA AATAAAACCC AACAAACATC 541 TATGATACGT GAACTTGCTT GGCCCTATAT GTTT Predicted gene structure (within gDNA segment 22461 to 26368): Exon 1 24538 24989 ( 452 n); cDNA 82 534 ( 453 n); score: 0.935 MATCH C08HBa0336I24.1+ SGN-E206285+ 0.935 452 0.787 C PGS_C08HBa0336I24.1+_SGN-E206285+ (24538 24989) Alignment (genomic DNA sequence = upper lines): GACCG-AAAA TAAGCAGGTG TATATGCGGA AGCTAGCAAC GCAAATTTCG AAAGACCATG 24596 ||||| |||| |||||||||| || | ||||| ||||||||| || || ||| |||||||| | GACCGAAAAA TAAGCAGGTG TAAACGCGGA AGCTAGCAAT GCTAACATCG AAAGACCACG 141 AGTAAGAAGA CAATGAGAAA TATACCAAAA GACACAAACA TTTAACGTGG TTCGGTCAAT 24656 |||||||||| ||| |||||| |||||||||| |||||||| | |||||||||| |||||||||| AGTAAGAAGA CAACGAGAAA TATACCAAAA GACACAAAGA TTTAACGTGG TTCGGTCAAT 201 CGACCTACGT CCACAAAGGA GATGAGCAAT CCACCATAAA TATGAGAGTA CAAAATACAG 24716 ||||||| || |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| CGACCTATGT CCACAAAGGA GATGAGCAAT CCACTATAAA TATGAGAGTA CAAAATACAG 261 AGGGAAACAA CCTCAACCGA TTCACCCAGA ATACATGGGA GGTTCACACA AGTGATAACG 24776 |||||||||| ||||||| | ||||| |||| |||||||||| |||||||||| ||| |||||| AGGGAAACAA TCTCAACCAA TTCACTCAGA ATACATGGGA GGTTCACACA AGTAATAACG 321 TATCAAGCTT GTGACCCACA AATTCTCCCC CTAACCAAAA CTCTCAAAAC CCTTAAGACT 24836 |||||||||| |||||||||| ||||||||| |||||||||| |||||||| | |||||||||| TATCAAGCTT GTGACCCACA AATTCTCCCT CTAACCAAAA CTCTCAAAGC CCTTAAGACT 381 ACATTGTGAA TGCTAATTAA GTTAGAAGGA ACATGACTCT ATTTATAGAG TCCTAAACCT 24896 |||||||||| || ||| ||| |||| ||||| ||||| |||| ||||||||| |||||||||| ACATTGTGAA TGTTAACTAA GTTAAAAGGA ACATGCCTCT ATTTATAGAA TCCTAAACCT 441 TTTCCTACAA GAAAAGGATT AGTCAATCCA AAACATTTTC CTACAAGGAA AACCTATTTA 24956 || ||||||| |||||||||| |||||||||| |||| ||||| |||||||||| || ||||||| TTCCCTACAA GAAAAGGATT AGTCAATCCA AAACCTTTTC CTACAAGGAA AATCTATTTA 501 TGGTAACAAA TTTAGGGCAA ATAAAACCCA ACA 24989 |||||| ||| ||||| |||| |||||||||| ||| TGGTAAGAAA TTTAGAGCAA ATAAAACCCA ACA 534 hqPGS_C08HBa0336I24.1+_SGN-E206285+ (24538 24989) ******************************************************************************** EST sequence 35 +strand 344 n (File: SGN-E206496+) 1 AACTAAGTAG AGCTATGTAT ATTTTGTCTG CAGAAGCAAT GGCTTAATTT ACAACTATAG 61 GTGGCGTACG TATAATGCAT GGACCGAAAA ATAAGCAGGT GTAAACGCGG AAGCTAGCAA 121 TGCTAACATC GAAAGACCAC GAGTAAGAAG ACAACGAGAA ATATACCAAA AGACACAAAG 181 ATTTAACGTG GTTCGGTCAA TCGACCTATG TCCACAAAGG AGATGAGCAA TCCACTATAA 241 ATATGAGAGT ACAAAATACA GAGGGAAACA ATCTCAACCA ATTCACTCAG AATACATGGG 301 AGGTTCACAC AAGTAATAAC GTATCAAGCT TGTGACCCAC AAAT Predicted gene structure (within gDNA segment 22461 to 25409): Exon 1 24538 24799 ( 262 n); cDNA 82 344 ( 263 n); score: 0.933 MATCH C08HBa0336I24.1+ SGN-E206496+ 0.933 262 0.762 C PGS_C08HBa0336I24.1+_SGN-E206496+ (24538 24799) Alignment (genomic DNA sequence = upper lines): GACCG-AAAA TAAGCAGGTG TATATGCGGA AGCTAGCAAC GCAAATTTCG AAAGACCATG 24596 ||||| |||| |||||||||| || | ||||| ||||||||| || || ||| |||||||| | GACCGAAAAA TAAGCAGGTG TAAACGCGGA AGCTAGCAAT GCTAACATCG AAAGACCACG 141 AGTAAGAAGA CAATGAGAAA TATACCAAAA GACACAAACA TTTAACGTGG TTCGGTCAAT 24656 |||||||||| ||| |||||| |||||||||| |||||||| | |||||||||| |||||||||| AGTAAGAAGA CAACGAGAAA TATACCAAAA GACACAAAGA TTTAACGTGG TTCGGTCAAT 201 CGACCTACGT CCACAAAGGA GATGAGCAAT CCACCATAAA TATGAGAGTA CAAAATACAG 24716 ||||||| || |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| CGACCTATGT CCACAAAGGA GATGAGCAAT CCACTATAAA TATGAGAGTA CAAAATACAG 261 AGGGAAACAA CCTCAACCGA TTCACCCAGA ATACATGGGA GGTTCACACA AGTGATAACG 24776 |||||||||| ||||||| | ||||| |||| |||||||||| |||||||||| ||| |||||| AGGGAAACAA TCTCAACCAA TTCACTCAGA ATACATGGGA GGTTCACACA AGTAATAACG 321 TATCAAGCTT GTGACCCACA AAT 24799 |||||||||| |||||||||| ||| TATCAAGCTT GTGACCCACA AAT 344 hqPGS_C08HBa0336I24.1+_SGN-E206496+ (24538 24799) ******************************************************************************** EST sequence 39 +strand 349 n (File: SGN-E207598+) 1 GAAAAGAAAC TAAGTAGAGC TATGTATATT TTGTCTGCAG AAGCAATGGC TTAATTTACA 61 ACTATAGGTG GCGTACGTAT AATGCATGGA CCGAAAAATA AGCAGGTGTA AACGCGGAAG 121 CTAGCAATGC TAACATCGAA AGACCACGAG TTAGAAGACA ACGAGAAATA TACCAAAAGA 181 CACAAAGATT TAACGTGGGT CGGTCAATCG ACCTATGTCC ACAAAGGAGA TGAGCAATCC 241 ACTATTAATA TGAGAGTACA AAATACAGAG GGAAACAATC TCAACCAATT CACTCAGAAT 301 ACATGGGAGG GTCACACAAG TAATAACGTA TCAAGCTTGT GACCCACAA Predicted gene structure (within gDNA segment 22391 to 25407): Exon 1 24538 24797 ( 260 n); cDNA 89 349 ( 261 n); score: 0.917 MATCH C08HBa0336I24.1+ SGN-E207598+ 0.917 260 0.745 C PGS_C08HBa0336I24.1+_SGN-E207598+ (24538 24797) Alignment (genomic DNA sequence = upper lines): GACCG-AAAA TAAGCAGGTG TATATGCGGA AGCTAGCAAC GCAAATTTCG AAAGACCATG 24596 ||||| |||| |||||||||| || | ||||| ||||||||| || || ||| |||||||| | GACCGAAAAA TAAGCAGGTG TAAACGCGGA AGCTAGCAAT GCTAACATCG AAAGACCACG 148 AGTAAGAAGA CAATGAGAAA TATACCAAAA GACACAAACA TTTAACGTGG TTCGGTCAAT 24656 ||| |||||| ||| |||||| |||||||||| |||||||| | |||||||||| ||||||||| AGTTAGAAGA CAACGAGAAA TATACCAAAA GACACAAAGA TTTAACGTGG GTCGGTCAAT 208 CGACCTACGT CCACAAAGGA GATGAGCAAT CCACCATAAA TATGAGAGTA CAAAATACAG 24716 ||||||| || |||||||||| |||||||||| |||| || || |||||||||| |||||||||| CGACCTATGT CCACAAAGGA GATGAGCAAT CCACTATTAA TATGAGAGTA CAAAATACAG 268 AGGGAAACAA CCTCAACCGA TTCACCCAGA ATACATGGGA GGTTCACACA AGTGATAACG 24776 |||||||||| ||||||| | ||||| |||| |||||||||| || ||||||| ||| |||||| AGGGAAACAA TCTCAACCAA TTCACTCAGA ATACATGGGA GGGTCACACA AGTAATAACG 328 TATCAAGCTT GTGACCCACA A 24797 |||||||||| |||||||||| | TATCAAGCTT GTGACCCACA A 349 hqPGS_C08HBa0336I24.1+_SGN-E207598+ (24538 24797) ******************************************************************************** EST sequence 21 +strand 667 n (File: SGN-E389613+) 1 TACATTACTG CAATCTCCAA ATCCAGCCAT AGATCCTTAG CATTGGACCA TTGGTAAAAG 61 TATTTAGTTA CAGATCCTTT TTTGCCTTTG GCAGCACTAA CTTATATACC TAATTAATTT 121 TGCCCCACAA TATGAAATGA GATAGCTTGC ATGCAACGCG TACCTGCTAC CTTCCACCAT 181 CACAAATCCA TAACCTGATA GTAATGAGTC AATGGAACCT TGACGGTGTT AGGACCAAAA 241 ATAAGCAGGT GTAAACGCGG AAGCTAGCAA AGCAAACCTC AAAAGACCAC GAGTAAGAAG 301 ACAACGAGAA ATATACCAAA AGATACAGAG ATTTAACGTG GTTCGGTCAA TTGACCTACG 361 TCCACAAAGG AGATGAGCAA TCCATTATAA ATATGAGAAT ACAAAATACA GAGAGAAACA 421 ACCTCAACCA AATTCACTCA GAATACATGA GAGATTCACA CAAGTGATAA CGTATCAAGA 481 AGCTTGTGAC TCATACCTCA ACGCATTATG TATGTGCAAA TCACAGGAGG AATGTACATT 541 CATGATCAGT TAAAAGTTAT AATAGAACAG GCAGAATAAA AGCAAAATAG AACATGATAA 601 TAATTTGTTA GAAACATTCT TGTACTCATC CAAATTAGTT GCAATGATTA CCTATTAGTA 661 ATATGAG Predicted gene structure (within gDNA segment 20961 to 28129): Exon 1 23097 23103 ( 7 n); cDNA 226 232 ( 7 n); score: 1.000 Intron 1 23104 24537 (1434 n); Pd: 0.000 (s: 0), Pa: 1.000 (s: 0.86) Exon 2 24538 24782 ( 245 n); cDNA 233 478 ( 246 n); score: 0.904 MATCH C08HBa0336I24.1+ SGN-E389613+ 0.904 252 0.378 C PGS_C08HBa0336I24.1+_SGN-E389613+ (23097 23103,24538 24782) Alignment (genomic DNA sequence = upper lines): GTGTTAGAGT GGGTGTCCGC ACGATCCAAT GGGTTAGGTC GTGACAATAA CAATAAGGTG 23156 ||||||| GTGTTAG... .......... .......... .......... .......... .......... 232 TAAAGACACA TTCGTAAAGT TAGAAGTAAC ACACATAAGA AAACCGTAAT TATAAATGCA 23216 .......... .......... .......... .......... .......... .......... 232 GGGGTCTGGG CGAAAAATCA TCGTAATTGT TGTTGTTGCT ACAAGGGGAT GGAACAAAGT 23276 .......... .......... .......... .......... .......... .......... 232 GAAGGATTCG ATATGTGTTT AAGCAAACTC TAGCAGGTTT AATTGGTAGC ATTTCTGACT 23336 .......... .......... .......... .......... .......... .......... 232 GGGTGTATGT ATATTGCGCG GGACTAAGAA TGAATAATGG ACCGGCACGA ATCGGTATCG 23396 .......... .......... .......... .......... .......... .......... 232 GACAGAAACA GTACGAATTG ACTGATACCG GAATAAATCG GATTGAAATT ACCGGGACAA 23456 .......... .......... .......... .......... .......... .......... 232 CTACTCAATC TGTTCCATTC CACTGTATAT AGAGATGGAA CCGAAACAAA TCGGACCGAA 23516 .......... .......... .......... .......... .......... .......... 232 CTGAAATGGA ACGGGATGGG ATAAACGGGA TAACTCATCT AGTTATTTCA AAAAATGATT 23576 .......... .......... .......... .......... .......... .......... 232 AAATTTTTTT TAGTTCTTTT ATTTTTTGAA TTACGAAAAT ATGAATATTT TTTTTATTTT 23636 .......... .......... .......... .......... .......... .......... 232 CTAAGTTTAA ATTAATAGTT TTAAAATTTA TAATGTAATT TTTTACTTAA GTTTATTTTA 23696 .......... .......... .......... .......... .......... .......... 232 AAGATATATT TTTAAAATTT TTTACTTATT AAGTTTGCAA GTTAAGTCTA ATAAAGTTTT 23756 .......... .......... .......... .......... .......... .......... 232 CTTTTTAAAA AAATATTTTT GAGAATCTTT TGATGTTTAT AAGTTTTTAT TTATTAATAT 23816 .......... .......... .......... .......... .......... .......... 232 ATTATAACTT ATAATGTATA TTTATAACTT GTAATTTAAA TAACTTAAAT TTGTATCTTT 23876 .......... .......... .......... .......... .......... .......... 232 AAAAAATTAA ATAAATTATA ATATAAATTA ATGAATAAAA AATAATTAAC TGAAATCAAA 23936 .......... .......... .......... .......... .......... .......... 232 CCAAAATAAA TTATTTGATA TAAAGTATTA GATTTTTTTT TAAAATAATT TATTTGATGA 23996 .......... .......... .......... .......... .......... .......... 232 CCGTAAAATG TGTCTTTGTT ATAAAAAAAT GTTAAATGTG AATAACTTTG TCTCGATGAG 24056 .......... .......... .......... .......... .......... .......... 232 TATAAAATTC TCTAAATAGT TTTTTGTTTA TTAACATGAG TCAATGACAT TTATATTTCC 24116 .......... .......... .......... .......... .......... .......... 232 CAAATTATTA TTGTAAGATG CCATTAGGAG GTTAATATTT ATAAATTAGA AAGAATTTCA 24176 .......... .......... .......... .......... .......... .......... 232 AAATAAATGA TATATTAAAA GATATTATTA TTTTATAATA GTAATGAAAA AATAATAAAC 24236 .......... .......... .......... .......... .......... .......... 232 TTAATCAAAG AGAGATGTCA TATATATATA TATATATATA TATATATATA TATATATATA 24296 .......... .......... .......... .......... .......... .......... 232 TATATATATA TATATAAAGT TGACTCTGCA AGGGCTAATG GGTTACTAGA GACTTTTATT 24356 .......... .......... .......... .......... .......... .......... 232 TGGGATTCAG GCTCAATAAC CATTTGTTAA ATAAGACTAG AAGTTAGAAG AACAGTTATG 24416 .......... .......... .......... .......... .......... .......... 232 AAAATTATGT GGAAGCTTTG ATTTCAGTCA TCTCTGTTCT GGTGTCTCGT CCCCTTCTAG 24476 .......... .......... .......... .......... .......... .......... 232 TTACCTTCTT CTATGTAACC TATCTATAAT TAGTATGTTA TTACTTTGTT GTGTATGTTA 24536 .......... .......... .......... .......... .......... .......... 232 GGACCGAAAA TAAGCAGGTG TATATGCGGA AGCTAGCAAC GCAAATTTCG AAAGACCATG 24596 |||| |||| |||||||||| || | ||||| ||||||||| ||||| || |||||||| | .GACCAAAAA TAAGCAGGTG TAAACGCGGA AGCTAGCAAA GCAAACCTCA AAAGACCACG 291 AGTAAGAAGA CAATGAGAAA TATACCAAAA GACACAAACA TTTAACGTGG TTCGGTCAAT 24656 |||||||||| ||| |||||| |||||||||| || ||| | | |||||||||| |||||||||| AGTAAGAAGA CAACGAGAAA TATACCAAAA GATACAGAGA TTTAACGTGG TTCGGTCAAT 351 CGACCTACGT CCACAAAGGA GATGAGCAAT CCACCATAAA TATGAGAGTA CAAAATACAG 24716 ||||||||| |||||||||| |||||||||| ||| ||||| ||||||| || |||||||||| TGACCTACGT CCACAAAGGA GATGAGCAAT CCATTATAAA TATGAGAATA CAAAATACAG 411 AGGGAAACAA CCTCAACC-G ATTCACCCAG AATACATGGG AGGTTCACAC AAGTGATAAC 24775 || ||||||| |||||||| |||||| ||| |||||||| | || ||||||| |||||||||| AGAGAAACAA CCTCAACCAA ATTCACTCAG AATACATGAG AGATTCACAC AAGTGATAAC 471 GTATCAA 24782 ||||||| GTATCAA 478 hqPGS_C08HBa0336I24.1+_SGN-E389613+ (24538 24782) ******************************************************************************** EST sequence 1 +strand 302 n (File: SGN-E370622+) 1 TTTTTTTTTT TGATAACCTA GAAATATGCC TATGACCCGC CCCTTTGGAC TAATCACAAC 61 CTTCTAAACT CGGTGGATAA TGTTAGGACC GAAAATAAGC AGGTGTAAAC GCGGAAGCTA 121 GCAACGCAAA CCTCAAAATA CCACGAGTAA GACGACAACG AGAAATATAC CAAAAGACAC 181 AAAGATTTAA CGTGGTTCGG TCAATCGACC TACGTCCACA AAGGAGATGA GCAATCTACT 241 ATAAATATGA GAGTACAAAA TACAGAGAGA AACAACCTCA ACCAATTCAC TCGGAATACA 301 TG Predicted gene structure (within gDNA segment 23141 to 25957): Exon 1 24538 24753 ( 216 n); cDNA 87 302 ( 216 n); score: 0.926 PPA cDNA 11 1 MATCH C08HBa0336I24.1+ SGN-E370622+ 0.926 216 0.715 C PGS_C08HBa0336I24.1+_SGN-E370622+ (24538 24753) Alignment (genomic DNA sequence = upper lines): GACCGAAAAT AAGCAGGTGT ATATGCGGAA GCTAGCAACG CAAATTTCGA AAGACCATGA 24597 |||||||||| |||||||||| | | |||||| |||||||||| |||| || | || |||| || GACCGAAAAT AAGCAGGTGT AAACGCGGAA GCTAGCAACG CAAACCTCAA AATACCACGA 146 GTAAGAAGAC AATGAGAAAT ATACCAAAAG ACACAAACAT TTAACGTGGT TCGGTCAATC 24657 |||||| ||| || ||||||| |||||||||| ||||||| || |||||||||| |||||||||| GTAAGACGAC AACGAGAAAT ATACCAAAAG ACACAAAGAT TTAACGTGGT TCGGTCAATC 206 GACCTACGTC CACAAAGGAG ATGAGCAATC CACCATAAAT ATGAGAGTAC AAAATACAGA 24717 |||||||||| |||||||||| |||||||||| || |||||| |||||||||| |||||||||| GACCTACGTC CACAAAGGAG ATGAGCAATC TACTATAAAT ATGAGAGTAC AAAATACAGA 266 GGGAAACAAC CTCAACCGAT TCACCCAGAA TACATG 24753 | |||||||| ||||||| || |||| | ||| |||||| GAGAAACAAC CTCAACCAAT TCACTCGGAA TACATG 302 hqPGS_C08HBa0336I24.1+_SGN-E370622+ (24538 24753) ******************************************************************************** EST sequence 24 +strand 595 n (File: SGN-E271645+) 1 GATTAGTCAA TCCAAAATTT TTCCCTAAAA GGAAAACCTA TTTATGTTAA GAAATTATGG 61 TAAATAAAAT CCAACAAATC TCCTCCCCCT TGGCCTGTAT TTCTGACCAA AATAAATTTC 121 TCCACATTCT TCATTTAATC TTCAACAACT TGCTTCTCTT CTTCTTAATC TCCTTTGTAA 181 AATTTATGTC TCAACCATAG AAAACCTCTC TGAAACAATT TCTCCAACAA AATCTTCATT 241 ACTGTCAAAA AGATTGCGGC TAGAACCTAC CACCTGTCAA GATGAACCAC CACCCTCTTT 301 CTAACCTGGT CCAATAATCG ATTATCGAAC CACTGAACCT GACCTCTGTC ATTAAATGGC 361 TCTAATACCC ACTTGTTAGG ATCGAAATAA GCAGGTGTAA ATGCGGAAGC TAGCAAAGCA 421 AACTTCGAAA GACCACGAGT AAGAAGACAA CGAGAAATAT ACCAAAAGAC ACCAAAGATT 481 TAACGTGGTT CGGTCAATCG ACCTACGTTC ACAAAGGAGA TGAGCAATCC ACTATAAATA 541 TGAGAGTACA ATATACAGAG AGAAACAACA TCAACCAATT CATTCGGAAT ATATG Predicted gene structure (within gDNA segment 19501 to 25759): Exon 1 24371 24386 ( 16 n); cDNA 364 379 ( 16 n); score: 0.812 Intron 1 24387 24537 ( 151 n); Pd: 0.000 (s: 0), Pa: 1.000 (s: 0.90) Exon 2 24538 24753 ( 216 n); cDNA 380 595 ( 216 n); score: 0.905 MATCH C08HBa0336I24.1+ SGN-E271645+ 0.905 232 0.390 C PGS_C08HBa0336I24.1+_SGN-E271645+ (24371 24386,24538 24753) Alignment (genomic DNA sequence = upper lines): AATAACCATT TGTTAAATAA GACTAGAAGT TAGAAGAACA GTTATGAAAA TTATGTGGAA 24430 |||| ||| | ||||| AATACCCACT TGTTAG.... .......... .......... .......... .......... 379 GCTTTGATTT CAGTCATCTC TGTTCTGGTG TCTCGTCCCC TTCTAGTTAC CTTCTTCTAT 24490 .......... .......... .......... .......... .......... .......... 379 GTAACCTATC TATAATTAGT ATGTTATTAC TTTGTTGTGT ATGTTAGGAC CGAAAATAAG 24550 || || ||||||| .......... .......... .......... .......... .......GAT CG-AAATAAG 391 CAGGTGTATA TGCGGAAGCT AGCAACGCAA ATTTCGAAAG ACCATGAGTA AGAAGACAAT 24610 |||||||| | |||||||||| ||||| |||| | |||||||| |||| ||||| ||||||||| CAGGTGTAAA TGCGGAAGCT AGCAAAGCAA ACTTCGAAAG ACCACGAGTA AGAAGACAAC 451 GAGAAATATA CCAAAAGACA -CAAACATTT AACGTGGTTC GGTCAATCGA CCTACGTCCA 24669 |||||||||| |||||||||| |||| |||| |||||||||| |||||||||| ||||||| || GAGAAATATA CCAAAAGACA CCAAAGATTT AACGTGGTTC GGTCAATCGA CCTACGTTCA 511 CAAAGGAGAT GAGCAATCCA CCATAAATAT GAGAGTACAA AATACAGAGG GAAACAACCT 24729 |||||||||| |||||||||| | |||||||| |||||||||| |||||||| |||||||| | CAAAGGAGAT GAGCAATCCA CTATAAATAT GAGAGTACAA TATACAGAGA GAAACAACAT 571 CAACCGATTC ACCCAGAATA CATG 24753 ||||| |||| | | ||||| ||| CAACCAATTC ATTCGGAATA TATG 595 hqPGS_C08HBa0336I24.1+_SGN-E271645+ (24538 24753) ******************************************************************************** EST sequence 229 -strand 490 n (File: SGN-E205772-) 1 GGTGTAAACG CGGAAGCTAG CAATACAAAC CTCGAAAGAC CACGAGTAAG AAGACAACGA 61 GAAATATATC AAAAGACACA AAGATTTAAC GTGGTTCGGT CAATCAACCT ACGTCCACAA 121 AGGAGATGAG CAATCCACTA TAAATATAAG AGTACAAAAT ACAGAGAGAA TCAACCTCAA 181 CCAATTCACT CAGAATACAT GGGAGGTTCA CACAAGTGAT AACATATCAA GCTTGTGACC 241 CACAGATTCT CCCTCTAACC AAAACTCTCA AAGCCTGTAA GAGTACATTG TGAATGCTGA 301 TTAAGTTAAA AGGAATATTC ATCTATTTAT AGAGTCCTAA ACCTTTTCCT ACAAGAAAAG 361 GATTAGTCAA TTCAAAACCT TTTCCTAAAA GGAAAACCTA TTTATGGTAA GAAATCAGGG 421 CAAATAAAAT CCAACAAGAT ACTTAAAAGA TGAGCAAGAG TGGCTAATGG ATTTAAATTA 481 ACAAATTGTT Predicted gene structure (within gDNA segment 23196 to 26362): Exon 1 24553 24989 ( 437 n); cDNA 1 436 ( 436 n); score: 0.915 MATCH C08HBa0336I24.1+ SGN-E205772- 0.915 437 0.892 C PGS_C08HBa0336I24.1+_SGN-E205772- (24553 24989) Alignment (genomic DNA sequence = upper lines): GGTGTATATG CGGAAGCTAG CAACGCAAAT TTCGAAAGAC CATGAGTAAG AAGACAATGA 24612 |||||| | | |||||||||| ||| |||| ||||||||| || ||||||| ||||||| || GGTGTAAACG CGGAAGCTAG CAATACAAAC CTCGAAAGAC CACGAGTAAG AAGACAACGA 60 GAAATATACC AAAAGACACA AACATTTAAC GTGGTTCGGT CAATCGACCT ACGTCCACAA 24672 |||||||| | |||||||||| || ||||||| |||||||||| ||||| |||| |||||||||| GAAATATATC AAAAGACACA AAGATTTAAC GTGGTTCGGT CAATCAACCT ACGTCCACAA 120 AGGAGATGAG CAATCCACCA TAAATATGAG AGTACAAAAT ACAGAGGGAA ACAACCTCAA 24732 |||||||||| |||||||| | ||||||| || |||||||||| |||||| ||| ||||||||| AGGAGATGAG CAATCCACTA TAAATATAAG AGTACAAAAT ACAGAGAGAA TCAACCTCAA 180 CCGATTCACC CAGAATACAT GGGAGGTTCA CACAAGTGAT AACGTATCAA GCTTGTGACC 24792 || |||||| |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| CCAATTCACT CAGAATACAT GGGAGGTTCA CACAAGTGAT AACATATCAA GCTTGTGACC 240 CACAAATTCT CCCCCTAACC AAAACTCTCA AAACCCTTAA GACTACATTG TGAATGCTAA 24852 |||| ||||| ||| |||||| |||||||||| || || ||| || ||||||| |||||||| | CACAGATTCT CCCTCTAACC AAAACTCTCA AAGCCTGTAA GAGTACATTG TGAATGCTGA 300 TTAAGTTAGA AGGAACATGA CTCTATTTAT AGAGTCCTAA ACCTTTTCCT ACAAGAAAAG 24912 |||||||| | ||||| || ||||||||| |||||||||| |||||||||| |||||||||| TTAAGTTAAA AGGAATATTC ATCTATTTAT AGAGTCCTAA ACCTTTTCCT ACAAGAAAAG 360 GATTAGTCAA TCCAAAACAT TTTCCTACAA GGAAAACCTA TTTATGGTAA CAAATTTAGG 24972 |||||||||| | |||||| | ||||||| || |||||||||| |||||||||| ||| | ||| GATTAGTCAA TTCAAAACCT TTTCCTAAAA GGAAAACCTA TTTATGGTAA GAAA-TCAGG 419 GCAAATAAAA CCCAACA 24989 |||||||||| |||||| GCAAATAAAA TCCAACA 436 hqPGS_C08HBa0336I24.1+_SGN-E205772- (24553 24989) ******************************************************************************** EST sequence 230 -strand 456 n (File: SGN-E205773-) 1 AAAGACCACG AGTAAGAAGC CATCGAGAAA TATATCAAAA GACACAAAGA TTTAACGTGG 61 TTCGGTCAAT CAACCTACGT CCACAAAGTA GATGAGCAAT CCACTATAAA TATAAGAGTA 121 CAAAATACAG AGAGAAACAG CTTCAACCAA TTCACTCAGA ATACATGGTA GGTTCACACA 181 AGTGATAACA TATCAAGCTT GTGACCCACA GATTCTCCCT CTAACCAAAA CTCTCAAAGC 241 CTGTAAGACT ACATTGTGAA TGCTGATTAA GTTAAAAGGA ATATTCATCT ATTTATAGAG 301 TCCTAAACCT TTTCCTACAA GAAAAGGATT AGTCAATTCA AAACCTTTTC CTAAAAGGAA 361 AACCTATTTA TGGTAAGAAA TCAGGGCAAA TAAAATCCAA CAAGATACTT AAAAGATGAG 421 CAAGAGTGGC TAATGGATTT AAATTAACTA ATTGTT Predicted gene structure (within gDNA segment 23536 to 26362): Exon 1 24587 24989 ( 403 n); cDNA 1 402 ( 402 n); score: 0.913 MATCH C08HBa0336I24.1+ SGN-E205773- 0.913 403 0.884 C PGS_C08HBa0336I24.1+_SGN-E205773- (24587 24989) Alignment (genomic DNA sequence = upper lines): AAAGACCATG AGTAAGAAGA CAATGAGAAA TATACCAAAA GACACAAACA TTTAACGTGG 24646 |||||||| | ||||||||| || |||||| |||| ||||| |||||||| | |||||||||| AAAGACCACG AGTAAGAAGC CATCGAGAAA TATATCAAAA GACACAAAGA TTTAACGTGG 60 TTCGGTCAAT CGACCTACGT CCACAAAGGA GATGAGCAAT CCACCATAAA TATGAGAGTA 24706 |||||||||| | |||||||| |||||||| | |||||||||| |||| ||||| ||| |||||| TTCGGTCAAT CAACCTACGT CCACAAAGTA GATGAGCAAT CCACTATAAA TATAAGAGTA 120 CAAAATACAG AGGGAAACAA CCTCAACCGA TTCACCCAGA ATACATGGGA GGTTCACACA 24766 |||||||||| || |||||| | |||||| | ||||| |||| |||||||| | |||||||||| CAAAATACAG AGAGAAACAG CTTCAACCAA TTCACTCAGA ATACATGGTA GGTTCACACA 180 AGTGATAACG TATCAAGCTT GTGACCCACA AATTCTCCCC CTAACCAAAA CTCTCAAAAC 24826 ||||||||| |||||||||| |||||||||| |||||||| |||||||||| |||||||| | AGTGATAACA TATCAAGCTT GTGACCCACA GATTCTCCCT CTAACCAAAA CTCTCAAAGC 240 CCTTAAGACT ACATTGTGAA TGCTAATTAA GTTAGAAGGA ACATGACTCT ATTTATAGAG 24886 | ||||||| |||||||||| |||| ||||| |||| ||||| | || ||| |||||||||| CTGTAAGACT ACATTGTGAA TGCTGATTAA GTTAAAAGGA ATATTCATCT ATTTATAGAG 300 TCCTAAACCT TTTCCTACAA GAAAAGGATT AGTCAATCCA AAACATTTTC CTACAAGGAA 24946 |||||||||| |||||||||| |||||||||| ||||||| || |||| ||||| ||| |||||| TCCTAAACCT TTTCCTACAA GAAAAGGATT AGTCAATTCA AAACCTTTTC CTAAAAGGAA 360 AACCTATTTA TGGTAACAAA TTTAGGGCAA ATAAAACCCA ACA 24989 |||||||||| |||||| ||| | ||||||| |||||| ||| ||| AACCTATTTA TGGTAAGAAA -TCAGGGCAA ATAAAATCCA ACA 402 hqPGS_C08HBa0336I24.1+_SGN-E205773- (24587 24989) ******************************************************************************** EST sequence 36 +strand 535 n (File: SGN-E243194+) 1 AAAAGACATA AAGATTTAAC GTGGTTCGGT CAATCGACCT ACGTCCACAA AGGAGATGAG 61 CAATCCACTA TAAATATGAG AGTACAAAAT ACAGAGGGAA ACAACCTCAA CCAATTCACT 121 CAGAATACAT GGGAGGTTCA CACAAGTGAT AACGTATCAA GCTTGTGACC CACAAATTCT 181 CCCTCTAACC AAAACTCTCA AAGCACTTAA GACTACATTT TGAATGCTGA TTAAGTTAGA 241 AGAAAAATGC CTCTATTTAT GGAGTCCTAA ACCTTTTCCT ACAAGAAAAG GATTAGTCAA 301 TCCAAAACCT TTTCCTACAA GAAAAGGATT AGTCAATCCA AAACCTTTTC CTACAAGGAA 361 AACCTATTTA TGGTAAGAAA TTTAGGGCAA ATAAAACCCA ACAAGTCTCC CCCTTGGCCT 421 GAATTTCTGA CAAATAAACT TGTCCACCTT CTTCACTTAA TCTTCAACAA CTTGCTTCTC 481 CTCTCCATAA TCTCCTTTGC AAAATTTATG TCTCAACACA AAGAATCTCT CTGAA Predicted gene structure (within gDNA segment 23906 to 26919): Exon 1 24623 24954 ( 332 n); cDNA 1 330 ( 330 n); score: 0.943 MATCH C08HBa0336I24.1+ SGN-E243194+ 0.943 332 0.621 C PGS_C08HBa0336I24.1+_SGN-E243194+ (24623 24954) Alignment (genomic DNA sequence = upper lines): AAAAGACACA AACATTTAAC GTGGTTCGGT CAATCGACCT ACGTCCACAA AGGAGATGAG 24682 |||||||| | || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAGACATA AAGATTTAAC GTGGTTCGGT CAATCGACCT ACGTCCACAA AGGAGATGAG 60 CAATCCACCA TAAATATGAG AGTACAAAAT ACAGAGGGAA ACAACCTCAA CCGATTCACC 24742 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| || |||||| CAATCCACTA TAAATATGAG AGTACAAAAT ACAGAGGGAA ACAACCTCAA CCAATTCACT 120 CAGAATACAT GGGAGGTTCA CACAAGTGAT AACGTATCAA GCTTGTGACC CACAAATTCT 24802 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGAATACAT GGGAGGTTCA CACAAGTGAT AACGTATCAA GCTTGTGACC CACAAATTCT 180 CCCCCTAACC AAAACTCTCA AAACCCTTAA GACTACATTG TGAATGCTAA TTAAGTTAGA 24862 ||| |||||| |||||||||| || | ||||| ||||||||| |||||||| | |||||||||| CCCTCTAACC AAAACTCTCA AAGCACTTAA GACTACATTT TGAATGCTGA TTAAGTTAGA 240 AGGAACATGA CTCTATTTAT AGAGTCCTAA ACCTTTTCCT ACAAGAAAAG GATTAGTCAA 24922 || || ||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| AGAAAAATGC CTCTATTTAT GGAGTCCTAA ACCTTTTCCT ACAAGAAAAG GATTAGTCAA 300 TCCAAAACAT TTTCCTACAA GGAAAACCTA TT 24954 |||||||| | |||||||||| ||||| | || TCCAAAACCT TTTCCTACAA -GAAAA-GGA TT 330 hqPGS_C08HBa0336I24.1+_SGN-E243194+ (24623 24954) ******************************************************************************** EST sequence 139 -strand 680 n (File: SGN-E379427-) 1 AAAACTTGCA AAACGGAATG GGCCTATTCA CATCAGATCA AGTTTTGTTC ACAGACCAAA 61 GGTCTAAAGG TACTGTTAAT TTGTGGGCCA GTAATTCTAA AGTTTTTGAA ACCGCATTTG 121 TTAATGCGAT GACTAAATTG GGCCGAGTTG GTGTGAAGAC GGGTAAGAAT GGAAATATTC 181 GTATAGACTG TGGAGCATTT AATTAAGGGC AACTTTCACG TATAGCAAAT AAAAAATTCA 241 TATTTGTATG TTATAACAAA GTTTGCATAA TTGCGCTCCA TAGCAAACAT AAAACTGTAT 301 AATTCGCTAT ACATATACAA TTGTATAATT CGCTGGCCTA AATTGTATAA TTTGATGGCC 361 TATTTCGCTG CAATTGTATA ATTCGCTATC TTCATTCACT GCGATTGTGT AATGCACAAT 421 CGTATAAATC GCTGCTTATT TCGCTGCAAT ATTTTTATAA ATTTGCTTTG CATACCGTTG 481 AATCGAATTA AAATGTATGT ATATTGCATA ATTATAAGTG TATGGCAAGA ATATATATGT 541 TTTTGTCTCG CTTTATACAA AAACAAAAAC ACAATATATA CACTTCTGTT GTATAAAGTT 601 AGAGAAAATT GTATTTCACT GCAATTATAT AATTCACAAT TGTATAATTC GTTGCCCTTT 661 TTCTGAACAA TATTTGAAGT Predicted gene structure (within gDNA segment 23799 to 31500): Exon 1 24538 24553 ( 16 n); cDNA 158 172 ( 15 n); score: 0.562 Intron 1 24554 27160 (2607 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.60) Exon 2 27161 27310 ( 150 n); cDNA 173 321 ( 149 n); score: 0.823 MATCH C08HBa0336I24.1+ SGN-E379427- 0.823 166 0.244 C PGS_C08HBa0336I24.1+_SGN-E379427- (24538 24553,27161 27310) Alignment (genomic DNA sequence = upper lines): GACCGAAAAT AAGCAGGTGT ATATGCGGAA GCTAGCAACG CAAATTTCGA AAGACCATGA 24597 ||| | || || | GACGGGTAAG AA-TGG.... .......... .......... .......... .......... 172 GTAAGAAGAC AATGAGAAAT ATACCAAAAG ACACAAACAT TTAACGTGGT TCGGTCAATC 24657 .......... .......... .......... .......... .......... .......... 172 GACCTACGTC CACAAAGGAG ATGAGCAATC CACCATAAAT ATGAGAGTAC AAAATACAGA 24717 .......... .......... .......... .......... .......... .......... 172 GGGAAACAAC CTCAACCGAT TCACCCAGAA TACATGGGAG GTTCACACAA GTGATAACGT 24777 .......... .......... .......... .......... .......... .......... 172 ATCAAGCTTG TGACCCACAA ATTCTCCCCC TAACCAAAAC TCTCAAAACC CTTAAGACTA 24837 .......... .......... .......... .......... .......... .......... 172 CATTGTGAAT GCTAATTAAG TTAGAAGGAA CATGACTCTA TTTATAGAGT CCTAAACCTT 24897 .......... .......... .......... .......... .......... .......... 172 TTCCTACAAG AAAAGGATTA GTCAATCCAA AACATTTTCC TACAAGGAAA ACCTATTTAT 24957 .......... .......... .......... .......... .......... .......... 172 GGTAACAAAT TTAGGGCAAA TAAAACCCAA CAGTGTATAC TATACGTCAT AATTTATATC 25017 .......... .......... .......... .......... .......... .......... 172 CTGCGAATAT TATGTATCAG TGTTTTGTAT TGGGAACCGA GTTTGTTTCG CAAGGCCTAC 25077 .......... .......... .......... .......... .......... .......... 172 AAGATTAATA AAATTAAACA GAGGTCGTCA CTAACAGTAA GAGTGGAAGA CAACATAGTG 25137 .......... .......... .......... .......... .......... .......... 172 AATTATCGAC ATAGTAATTA GTCCAGAATT TCAGATATGA CTTATCATTG GTATTAAAAA 25197 .......... .......... .......... .......... .......... .......... 172 AATCTTTTAC AATAATCCTA AATCCTAATC ATGAAAAGTA AGTGCCTCAT AATTTTATCC 25257 .......... .......... .......... .......... .......... .......... 172 CTTCGACGAA TTTTTATTAT GATCAATGCC CCACTAGCTA AATAGGCGTA AGAAAAAGTT 25317 .......... .......... .......... .......... .......... .......... 172 ATCTGAATAA CGTTCATCCG AATTGAGTTC CTGAGATTTC AAAAACATAG AAACGGGGAT 25377 .......... .......... .......... .......... .......... .......... 172 TAAGAAAAAA AAAGTAATAG AATAGAGTGC AGAAATTTAC ATATTAGAAG ATTAAGAAAA 25437 .......... .......... .......... .......... .......... .......... 172 TGATTTCCCC CCTCTTCAGA TTAGCTTAAT CAGAATAGAC AATATAAATA TTTAGAATTT 25497 .......... .......... .......... .......... .......... .......... 172 AGATTAGATT TTAGAGAATA TGAAATGATG GGTTAATAGA AAATGGTAAT TATTAGGACA 25557 .......... .......... .......... .......... .......... .......... 172 CTTATTGTTT TAAATTATAA TTAAAAGGAA GAGGATAAAT TGGATACATT GTAATTAAAT 25617 .......... .......... .......... .......... .......... .......... 172 AAGATAAAAA TTTCAGTGCG GCTTACATCG AGTTTATTTA ATGAAATAAA ATATATGTCA 25677 .......... .......... .......... .......... .......... .......... 172 ATTAATTATG ATTAAATAAA ATAAATTATA AATTTAAACA CGTGACATAT ATTTATTAAC 25737 .......... .......... .......... .......... .......... .......... 172 TTGATATAAA TATTCTATAC CAATAAGTTT TATCCTATAT ATAGATGTTG TATGTTTTTT 25797 .......... .......... .......... .......... .......... .......... 172 TTCATTTTAT TTGATCCCTA TATTCAAAAT AAAAATTTTA TTTTTATTTA TTTATTTTAA 25857 .......... .......... .......... .......... .......... .......... 172 TCATTCTAGA TAATATCTTT TTCATTCATT TACTTTTGTT TGTTCACAAT GCACTTTACA 25917 .......... .......... .......... .......... .......... .......... 172 CTTTCTTTTT TTTTAAAAAA GACTACGTAA TAAATAAAGT ACTTAGTATA ATTATAATGA 25977 .......... .......... .......... .......... .......... .......... 172 CTATTAACAT TTCAAAAGTT CTTTTGAAAA ATTATTTAAG ATATTAAAAA TTAGTTAATG 26037 .......... .......... .......... .......... .......... .......... 172 TAAGCATTAA GAATTAGTTG AGTCAATTTA AGTGCATATT GTCAAGTATT GGAATGGTAG 26097 .......... .......... .......... .......... .......... .......... 172 GTTGGGCTAA TATATAATCA TTTTACCTAT CAAATTAAAT TATACAACTA CTTACATGAC 26157 .......... .......... .......... .......... .......... .......... 172 CTAAAAGATG TGAAACAATA AAAGGACCTT TTCGTACTTA CAATAATGAT ATAGTCCCAT 26217 .......... .......... .......... .......... .......... .......... 172 GGATTATATA TTAATGTATT ATATAGTTTT GCCCACAATA ATTTAGTAGG GTGTATAAAA 26277 .......... .......... .......... .......... .......... .......... 172 ATAATATTAA ATATAATATA ATAATAGTAT TGAATATTAA TATTAGTAAT ATAAATATTA 26337 .......... .......... .......... .......... .......... .......... 172 CTTATGTTTA TATTAATTAT GTTAAAAATA TTTTTTACGT TATATTTAAT TTGATATATT 26397 .......... .......... .......... .......... .......... .......... 172 AAAAATAACA TGTATTATAT AATATTTTAT TTTAAAAAAA TATTTAATTA CAAAAATATA 26457 .......... .......... .......... .......... .......... .......... 172 ATCCATAAAT ACGTGAAAAG GTGTGAGAAA AAGTTTTCAA GGGACAAAAC ATTAAATACA 26517 .......... .......... .......... .......... .......... .......... 172 CTAAACTAAT CAAGTAATAC ATTTATGCTA AATGATCAGA ATTTGGGTAG AATTTTTTTT 26577 .......... .......... .......... .......... .......... .......... 172 AAAAATATTT TTTAATTATA AAATAACAAG AATATTATAG TCTTTTTAAT TTTCTTGCCA 26637 .......... .......... .......... .......... .......... .......... 172 AATACTGATC AATTTTTTTC TTTCTTTCTA TACTATGTTG AATATGCACC AATTATAATG 26697 .......... .......... .......... .......... .......... .......... 172 AAATCCAGCT ACTCCCTCCG TTCACAATTA TATGTCATAT TACGGTTATT TATATATTCC 26757 .......... .......... .......... .......... .......... .......... 172 TTAACAAAAA TTTAATATAG GGTGTAATTT GATTAATATA ATTCTATTAT AACAAGAATA 26817 .......... .......... .......... .......... .......... .......... 172 TCAAAAGTCT ACATATCTAT CTAATTAAAC TAAACTATCA TTAAGAGCAA ATTTTTTTTA 26877 .......... .......... .......... .......... .......... .......... 172 AAAATAATTA ATTACTTTTT AATTATTTAA ATTAACAATT AATCTTAAAC ATATATTTTT 26937 .......... .......... .......... .......... .......... .......... 172 AATATATCTA TCAAACAATT GTGGACGAAG AAAATACAAA GCTCGAACAA GATAAGATAA 26997 .......... .......... .......... .......... .......... .......... 172 CAAGCTTTTA AGGCCGCTCA ACGTGGTTGG TGGCCTAGAC AATACATAAT GAGTCCGAAA 27057 .......... .......... .......... .......... .......... .......... 172 ATGCAATTAA TACAAGAATT ATTACTATTA TGTTACAAGC AATATACAAA TTTGGAATAT 27117 .......... .......... .......... .......... .......... .......... 172 AGTCAAGTTT TTTTGGTAAA ACTCTTATCA GGTATGTCAA TTAAAATATT TATATTTTAC 27177 ||||||| || | || .......... .......... .......... .......... ...AAATATT CGTA-TAGAC 188 T-TATATTAT TTTTAATAGG ATAACTTTCA CATATAGCAA ATAAAAAATT CATATTTGTA 27236 | | | || || ||| |||||||| | |||||||| |||||||||| |||||||||| TGTGGAGCAT TTAATTAAGG GCAACTTTCA CGTATAGCAA ATAAAAAATT CATATTTGTA 248 TGATATAGCA AAATTTGTGT AATTACGCTC CATAGCAAAC ATAAAAACTG TATAATTCGC 27296 || |||| || || |||| | |||| ||||| |||||||||| || ||||||| |||||||||| TGTTATAACA AAGTTTGCAT AATTGCGCTC CATAGCAAAC AT-AAAACTG TATAATTCGC 307 TATACATATA CAAT 27310 |||||||||| |||| TATACATATA CAAT 321 hqPGS_C08HBa0336I24.1+_SGN-E379427- (27161 27310) ******************************************************************************** EST sequence 264 -strand 372 n (File: SGN-E200682-) 1 AATTGAATAC TTTTAAGGAA AAATTGAAAG TTGAGTGACT TTTTGAGAGA AAGTATGGGT 61 GGAATCCCCC GAGAAGAGTT AGAATGACCG TTCCCGCTCC TTCGGCGATA CCAAACAAAT 121 GACTATTTGA ATCGGGGTTT TGAGCACAAA GATTAGTTGA ATGACCATCT AAAGTATTAA 181 CTCGGAGATA AACTGATTTT GGAAGAACTA TTTTCATATG TCCATGATAC ATTATTGGGC 241 AACTTTTACA TATAGCAAAT AAAAAATTCA TATTTGTATG CTAGCAAACT TTGCATAATT 301 GCGCTGCATA GCAAACATAA AACTGTATAA TTTGCTATAC ATATACAATT GTATAATTCG 361 CTGGCCTAAA TT Predicted gene structure (within gDNA segment 23526 to 28140): Exon 1 24371 24381 ( 11 n); cDNA 160 170 ( 11 n); score: 0.818 Intron 1 24382 24537 ( 156 n); Pd: 0.000 (s: 0), Pa: 1.000 (s: 0.48) Exon 2 24538 24597 ( 60 n); cDNA 171 227 ( 57 n); score: 0.533 Intron 2 24598 27185 (2588 n); Pd: 0.465 (s: 0.56), Pa: 0.000 (s: 0.84) Exon 3 27186 27330 ( 145 n); cDNA 228 370 ( 143 n); score: 0.790 MATCH C08HBa0336I24.1+ SGN-E200682- 0.715 216 0.581 C PGS_C08HBa0336I24.1+_SGN-E200682- (24371 24381,24538 24597,27186 27330) Alignment (genomic DNA sequence = upper lines): AATAACCATT TGTTAAATAA GACTAGAAGT TAGAAGAACA GTTATGAAAA TTATGTGGAA 24430 ||| ||||| | AATGACCATC T......... .......... .......... .......... .......... 170 GCTTTGATTT CAGTCATCTC TGTTCTGGTG TCTCGTCCCC TTCTAGTTAC CTTCTTCTAT 24490 .......... .......... .......... .......... .......... .......... 170 GTAACCTATC TATAATTAGT ATGTTATTAC TTTGTTGTGT ATGTTAGGAC CGAAAATAAG 24550 | | | ||| .......... .......... .......... .......... .......AA- AGTAT-TAAC 181 CAGGTGTATA TGCGGAAGCT AGCAACGCAA ATTTCGAAAG ACCATGAGTA AGAAGACAAT 24610 || | ||| | || | | | | | |||| | | |||||| TCGGAG-ATA AACTGATTTT GGAAGAACTA TTTTCATATG TCCATGA... .......... 227 GAGAAATATA CCAAAAGACA CAAACATTTA ACGTGGTTCG GTCAATCGAC CTACGTCCAC 24670 .......... .......... .......... .......... .......... .......... 227 AAAGGAGATG AGCAATCCAC CATAAATATG AGAGTACAAA ATACAGAGGG AAACAACCTC 24730 .......... .......... .......... .......... .......... .......... 227 AACCGATTCA CCCAGAATAC ATGGGAGGTT CACACAAGTG ATAACGTATC AAGCTTGTGA 24790 .......... .......... .......... .......... .......... .......... 227 CCCACAAATT CTCCCCCTAA CCAAAACTCT CAAAACCCTT AAGACTACAT TGTGAATGCT 24850 .......... .......... .......... .......... .......... .......... 227 AATTAAGTTA GAAGGAACAT GACTCTATTT ATAGAGTCCT AAACCTTTTC CTACAAGAAA 24910 .......... .......... .......... .......... .......... .......... 227 AGGATTAGTC AATCCAAAAC ATTTTCCTAC AAGGAAAACC TATTTATGGT AACAAATTTA 24970 .......... .......... .......... .......... .......... .......... 227 GGGCAAATAA AACCCAACAG TGTATACTAT ACGTCATAAT TTATATCCTG CGAATATTAT 25030 .......... .......... .......... .......... .......... .......... 227 GTATCAGTGT TTTGTATTGG GAACCGAGTT TGTTTCGCAA GGCCTACAAG ATTAATAAAA 25090 .......... .......... .......... .......... .......... .......... 227 TTAAACAGAG GTCGTCACTA ACAGTAAGAG TGGAAGACAA CATAGTGAAT TATCGACATA 25150 .......... .......... .......... .......... .......... .......... 227 GTAATTAGTC CAGAATTTCA GATATGACTT ATCATTGGTA TTAAAAAAAT CTTTTACAAT 25210 .......... .......... .......... .......... .......... .......... 227 AATCCTAAAT CCTAATCATG AAAAGTAAGT GCCTCATAAT TTTATCCCTT CGACGAATTT 25270 .......... .......... .......... .......... .......... .......... 227 TTATTATGAT CAATGCCCCA CTAGCTAAAT AGGCGTAAGA AAAAGTTATC TGAATAACGT 25330 .......... .......... .......... .......... .......... .......... 227 TCATCCGAAT TGAGTTCCTG AGATTTCAAA AACATAGAAA CGGGGATTAA GAAAAAAAAA 25390 .......... .......... .......... .......... .......... .......... 227 GTAATAGAAT AGAGTGCAGA AATTTACATA TTAGAAGATT AAGAAAATGA TTTCCCCCCT 25450 .......... .......... .......... .......... .......... .......... 227 CTTCAGATTA GCTTAATCAG AATAGACAAT ATAAATATTT AGAATTTAGA TTAGATTTTA 25510 .......... .......... .......... .......... .......... .......... 227 GAGAATATGA AATGATGGGT TAATAGAAAA TGGTAATTAT TAGGACACTT ATTGTTTTAA 25570 .......... .......... .......... .......... .......... .......... 227 ATTATAATTA AAAGGAAGAG GATAAATTGG ATACATTGTA ATTAAATAAG ATAAAAATTT 25630 .......... .......... .......... .......... .......... .......... 227 CAGTGCGGCT TACATCGAGT TTATTTAATG AAATAAAATA TATGTCAATT AATTATGATT 25690 .......... .......... .......... .......... .......... .......... 227 AAATAAAATA AATTATAAAT TTAAACACGT GACATATATT TATTAACTTG ATATAAATAT 25750 .......... .......... .......... .......... .......... .......... 227 TCTATACCAA TAAGTTTTAT CCTATATATA GATGTTGTAT GTTTTTTTTC ATTTTATTTG 25810 .......... .......... .......... .......... .......... .......... 227 ATCCCTATAT TCAAAATAAA AATTTTATTT TTATTTATTT ATTTTAATCA TTCTAGATAA 25870 .......... .......... .......... .......... .......... .......... 227 TATCTTTTTC ATTCATTTAC TTTTGTTTGT TCACAATGCA CTTTACACTT TCTTTTTTTT 25930 .......... .......... .......... .......... .......... .......... 227 TAAAAAAGAC TACGTAATAA ATAAAGTACT TAGTATAATT ATAATGACTA TTAACATTTC 25990 .......... .......... .......... .......... .......... .......... 227 AAAAGTTCTT TTGAAAAATT ATTTAAGATA TTAAAAATTA GTTAATGTAA GCATTAAGAA 26050 .......... .......... .......... .......... .......... .......... 227 TTAGTTGAGT CAATTTAAGT GCATATTGTC AAGTATTGGA ATGGTAGGTT GGGCTAATAT 26110 .......... .......... .......... .......... .......... .......... 227 ATAATCATTT TACCTATCAA ATTAAATTAT ACAACTACTT ACATGACCTA AAAGATGTGA 26170 .......... .......... .......... .......... .......... .......... 227 AACAATAAAA GGACCTTTTC GTACTTACAA TAATGATATA GTCCCATGGA TTATATATTA 26230 .......... .......... .......... .......... .......... .......... 227 ATGTATTATA TAGTTTTGCC CACAATAATT TAGTAGGGTG TATAAAAATA ATATTAAATA 26290 .......... .......... .......... .......... .......... .......... 227 TAATATAATA ATAGTATTGA ATATTAATAT TAGTAATATA AATATTACTT ATGTTTATAT 26350 .......... .......... .......... .......... .......... .......... 227 TAATTATGTT AAAAATATTT TTTACGTTAT ATTTAATTTG ATATATTAAA AATAACATGT 26410 .......... .......... .......... .......... .......... .......... 227 ATTATATAAT ATTTTATTTT AAAAAAATAT TTAATTACAA AAATATAATC CATAAATACG 26470 .......... .......... .......... .......... .......... .......... 227 TGAAAAGGTG TGAGAAAAAG TTTTCAAGGG ACAAAACATT AAATACACTA AACTAATCAA 26530 .......... .......... .......... .......... .......... .......... 227 GTAATACATT TATGCTAAAT GATCAGAATT TGGGTAGAAT TTTTTTTAAA AATATTTTTT 26590 .......... .......... .......... .......... .......... .......... 227 AATTATAAAA TAACAAGAAT ATTATAGTCT TTTTAATTTT CTTGCCAAAT ACTGATCAAT 26650 .......... .......... .......... .......... .......... .......... 227 TTTTTTCTTT CTTTCTATAC TATGTTGAAT ATGCACCAAT TATAATGAAA TCCAGCTACT 26710 .......... .......... .......... .......... .......... .......... 227 CCCTCCGTTC ACAATTATAT GTCATATTAC GGTTATTTAT ATATTCCTTA ACAAAAATTT 26770 .......... .......... .......... .......... .......... .......... 227 AATATAGGGT GTAATTTGAT TAATATAATT CTATTATAAC AAGAATATCA AAAGTCTACA 26830 .......... .......... .......... .......... .......... .......... 227 TATCTATCTA ATTAAACTAA ACTATCATTA AGAGCAAATT TTTTTTAAAA ATAATTAATT 26890 .......... .......... .......... .......... .......... .......... 227 ACTTTTTAAT TATTTAAATT AACAATTAAT CTTAAACATA TATTTTTAAT ATATCTATCA 26950 .......... .......... .......... .......... .......... .......... 227 AACAATTGTG GACGAAGAAA ATACAAAGCT CGAACAAGAT AAGATAACAA GCTTTTAAGG 27010 .......... .......... .......... .......... .......... .......... 227 CCGCTCAACG TGGTTGGTGG CCTAGACAAT ACATAATGAG TCCGAAAATG CAATTAATAC 27070 .......... .......... .......... .......... .......... .......... 227 AAGAATTATT ACTATTATGT TACAAGCAAT ATACAAATTT GGAATATAGT CAAGTTTTTT 27130 .......... .......... .......... .......... .......... .......... 227 TGGTAAAACT CTTATCAGGT ATGTCAATTA AAATATTTAT ATTTTACTTA TATTATTTTT 27190 | | .......... .......... .......... .......... .......... .....TACAT 232 AATAGGATAA CTTTCACATA TAGCAAATAA AAAATTCATA TTTGTATGAT ATAGCAAAAT 27250 || || || |||| ||||| |||||||||| |||||||||| |||||||| ||||||| | TATTGGGCAA CTTTTACATA TAGCAAATAA AAAATTCATA TTTGTATG-- CTAGCAAACT 290 TTGTGTAATT ACGCTCCATA GCAAACATAA AAACTGTATA ATTCGCTATA CATATACAAT 27310 ||| ||||| |||| |||| |||||||| | |||||||||| ||| |||||| |||||||||| TTGCATAATT GCGCTGCATA GCAAACAT-A AAACTGTATA ATTTGCTATA CATATACAAT 349 AGCA-AACTG TATAAAATAA A 27330 | | || | | ||| | TGTATAATTC GCTGGCCTAA A 370 hqPGS_C08HBa0336I24.1+_SGN-E200682- (27186 27330) ******************************************************************************** EST sequence 128 -strand 680 n (File: SGN-E379333-) 1 ATCGAATTAA ATAAGCTATG TGTATATATT AAATGTAGAG GAGAAAGAGA GGGAATAATT 61 TAGAATTAAG GGTAAAATAA AATGGTTCAT ATTATATTTT TTAATGGGTC GGGTTAGGTG 121 GGTGGATCAC TAAATAGTAT TTTTTATTTT TTTAAAAAAT TTTGATTTGT TATATAAACA 181 ATTAACGTAA ATAAATTTTA ATTTAAAAAG TAATTTAATA GATTGAGTGA CTTGAGGAAA 241 AAATAAATAG TTGAGTCACT TTTGAGTTAA AATTCAAAGT TGAGTCACTT TTTGAGAAAT 301 GTATGGATAA TTGAATACTT TTAAGGAAAA ATTGAAAGTT GAGTGACTTT TTGAGAGAAA 361 GTATGGGTGG AATCCCCCGA GAAGAGTTAG AATGACCGTT CCCGCTCCTT CGGCGATACC 421 AAACAAATGA CTATTTGAAT CGGGGTTTTG AGCACAAAGA TTAGTTGAAT GACCATCTAA 481 AGTATTAACT CGGAGATAAA CTGATTTTGG AAGAACTATT TTCATATGTC CATGATACAT 541 TATTGGGCAA CTTTTACATA TAGCAAATAA AAAATTCATA TTTGTATGCT AGCAAACTTT 601 GCATAATTGC GCTGCATAGC AAACATAAAA CTGTATAATT TGCTATACAT ATACAATTGT 661 ATAATTCGCT GGCCTAAATT Predicted gene structure (within gDNA segment 21046 to 28140): Exon 1 24371 24381 ( 11 n); cDNA 468 478 ( 11 n); score: 0.818 Intron 1 24382 24537 ( 156 n); Pd: 0.000 (s: 0), Pa: 1.000 (s: 0.48) Exon 2 24538 24597 ( 60 n); cDNA 479 535 ( 57 n); score: 0.533 Intron 2 24598 27185 (2588 n); Pd: 0.465 (s: 0.56), Pa: 0.000 (s: 0.84) Exon 3 27186 27330 ( 145 n); cDNA 536 678 ( 143 n); score: 0.790 MATCH C08HBa0336I24.1+ SGN-E379333- 0.715 216 0.318 C PGS_C08HBa0336I24.1+_SGN-E379333- (24371 24381,24538 24597,27186 27330) Alignment (genomic DNA sequence = upper lines): AATAACCATT TGTTAAATAA GACTAGAAGT TAGAAGAACA GTTATGAAAA TTATGTGGAA 24430 ||| ||||| | AATGACCATC T......... .......... .......... .......... .......... 478 GCTTTGATTT CAGTCATCTC TGTTCTGGTG TCTCGTCCCC TTCTAGTTAC CTTCTTCTAT 24490 .......... .......... .......... .......... .......... .......... 478 GTAACCTATC TATAATTAGT ATGTTATTAC TTTGTTGTGT ATGTTAGGAC CGAAAATAAG 24550 | | | ||| .......... .......... .......... .......... .......-AA AG-TATTAAC 489 CAGGTGTATA TGCGGAAGCT AGCAACGCAA ATTTCGAAAG ACCATGAGTA AGAAGACAAT 24610 || | ||| | || | | | | | |||| | | |||||| TCGGAG-ATA AACTGATTTT GGAAGAACTA TTTTCATATG TCCATGA... .......... 535 GAGAAATATA CCAAAAGACA CAAACATTTA ACGTGGTTCG GTCAATCGAC CTACGTCCAC 24670 .......... .......... .......... .......... .......... .......... 535 AAAGGAGATG AGCAATCCAC CATAAATATG AGAGTACAAA ATACAGAGGG AAACAACCTC 24730 .......... .......... .......... .......... .......... .......... 535 AACCGATTCA CCCAGAATAC ATGGGAGGTT CACACAAGTG ATAACGTATC AAGCTTGTGA 24790 .......... .......... .......... .......... .......... .......... 535 CCCACAAATT CTCCCCCTAA CCAAAACTCT CAAAACCCTT AAGACTACAT TGTGAATGCT 24850 .......... .......... .......... .......... .......... .......... 535 AATTAAGTTA GAAGGAACAT GACTCTATTT ATAGAGTCCT AAACCTTTTC CTACAAGAAA 24910 .......... .......... .......... .......... .......... .......... 535 AGGATTAGTC AATCCAAAAC ATTTTCCTAC AAGGAAAACC TATTTATGGT AACAAATTTA 24970 .......... .......... .......... .......... .......... .......... 535 GGGCAAATAA AACCCAACAG TGTATACTAT ACGTCATAAT TTATATCCTG CGAATATTAT 25030 .......... .......... .......... .......... .......... .......... 535 GTATCAGTGT TTTGTATTGG GAACCGAGTT TGTTTCGCAA GGCCTACAAG ATTAATAAAA 25090 .......... .......... .......... .......... .......... .......... 535 TTAAACAGAG GTCGTCACTA ACAGTAAGAG TGGAAGACAA CATAGTGAAT TATCGACATA 25150 .......... .......... .......... .......... .......... .......... 535 GTAATTAGTC CAGAATTTCA GATATGACTT ATCATTGGTA TTAAAAAAAT CTTTTACAAT 25210 .......... .......... .......... .......... .......... .......... 535 AATCCTAAAT CCTAATCATG AAAAGTAAGT GCCTCATAAT TTTATCCCTT CGACGAATTT 25270 .......... .......... .......... .......... .......... .......... 535 TTATTATGAT CAATGCCCCA CTAGCTAAAT AGGCGTAAGA AAAAGTTATC TGAATAACGT 25330 .......... .......... .......... .......... .......... .......... 535 TCATCCGAAT TGAGTTCCTG AGATTTCAAA AACATAGAAA CGGGGATTAA GAAAAAAAAA 25390 .......... .......... .......... .......... .......... .......... 535 GTAATAGAAT AGAGTGCAGA AATTTACATA TTAGAAGATT AAGAAAATGA TTTCCCCCCT 25450 .......... .......... .......... .......... .......... .......... 535 CTTCAGATTA GCTTAATCAG AATAGACAAT ATAAATATTT AGAATTTAGA TTAGATTTTA 25510 .......... .......... .......... .......... .......... .......... 535 GAGAATATGA AATGATGGGT TAATAGAAAA TGGTAATTAT TAGGACACTT ATTGTTTTAA 25570 .......... .......... .......... .......... .......... .......... 535 ATTATAATTA AAAGGAAGAG GATAAATTGG ATACATTGTA ATTAAATAAG ATAAAAATTT 25630 .......... .......... .......... .......... .......... .......... 535 CAGTGCGGCT TACATCGAGT TTATTTAATG AAATAAAATA TATGTCAATT AATTATGATT 25690 .......... .......... .......... .......... .......... .......... 535 AAATAAAATA AATTATAAAT TTAAACACGT GACATATATT TATTAACTTG ATATAAATAT 25750 .......... .......... .......... .......... .......... .......... 535 TCTATACCAA TAAGTTTTAT CCTATATATA GATGTTGTAT GTTTTTTTTC ATTTTATTTG 25810 .......... .......... .......... .......... .......... .......... 535 ATCCCTATAT TCAAAATAAA AATTTTATTT TTATTTATTT ATTTTAATCA TTCTAGATAA 25870 .......... .......... .......... .......... .......... .......... 535 TATCTTTTTC ATTCATTTAC TTTTGTTTGT TCACAATGCA CTTTACACTT TCTTTTTTTT 25930 .......... .......... .......... .......... .......... .......... 535 TAAAAAAGAC TACGTAATAA ATAAAGTACT TAGTATAATT ATAATGACTA TTAACATTTC 25990 .......... .......... .......... .......... .......... .......... 535 AAAAGTTCTT TTGAAAAATT ATTTAAGATA TTAAAAATTA GTTAATGTAA GCATTAAGAA 26050 .......... .......... .......... .......... .......... .......... 535 TTAGTTGAGT CAATTTAAGT GCATATTGTC AAGTATTGGA ATGGTAGGTT GGGCTAATAT 26110 .......... .......... .......... .......... .......... .......... 535 ATAATCATTT TACCTATCAA ATTAAATTAT ACAACTACTT ACATGACCTA AAAGATGTGA 26170 .......... .......... .......... .......... .......... .......... 535 AACAATAAAA GGACCTTTTC GTACTTACAA TAATGATATA GTCCCATGGA TTATATATTA 26230 .......... .......... .......... .......... .......... .......... 535 ATGTATTATA TAGTTTTGCC CACAATAATT TAGTAGGGTG TATAAAAATA ATATTAAATA 26290 .......... .......... .......... .......... .......... .......... 535 TAATATAATA ATAGTATTGA ATATTAATAT TAGTAATATA AATATTACTT ATGTTTATAT 26350 .......... .......... .......... .......... .......... .......... 535 TAATTATGTT AAAAATATTT TTTACGTTAT ATTTAATTTG ATATATTAAA AATAACATGT 26410 .......... .......... .......... .......... .......... .......... 535 ATTATATAAT ATTTTATTTT AAAAAAATAT TTAATTACAA AAATATAATC CATAAATACG 26470 .......... .......... .......... .......... .......... .......... 535 TGAAAAGGTG TGAGAAAAAG TTTTCAAGGG ACAAAACATT AAATACACTA AACTAATCAA 26530 .......... .......... .......... .......... .......... .......... 535 GTAATACATT TATGCTAAAT GATCAGAATT TGGGTAGAAT TTTTTTTAAA AATATTTTTT 26590 .......... .......... .......... .......... .......... .......... 535 AATTATAAAA TAACAAGAAT ATTATAGTCT TTTTAATTTT CTTGCCAAAT ACTGATCAAT 26650 .......... .......... .......... .......... .......... .......... 535 TTTTTTCTTT CTTTCTATAC TATGTTGAAT ATGCACCAAT TATAATGAAA TCCAGCTACT 26710 .......... .......... .......... .......... .......... .......... 535 CCCTCCGTTC ACAATTATAT GTCATATTAC GGTTATTTAT ATATTCCTTA ACAAAAATTT 26770 .......... .......... .......... .......... .......... .......... 535 AATATAGGGT GTAATTTGAT TAATATAATT CTATTATAAC AAGAATATCA AAAGTCTACA 26830 .......... .......... .......... .......... .......... .......... 535 TATCTATCTA ATTAAACTAA ACTATCATTA AGAGCAAATT TTTTTTAAAA ATAATTAATT 26890 .......... .......... .......... .......... .......... .......... 535 ACTTTTTAAT TATTTAAATT AACAATTAAT CTTAAACATA TATTTTTAAT ATATCTATCA 26950 .......... .......... .......... .......... .......... .......... 535 AACAATTGTG GACGAAGAAA ATACAAAGCT CGAACAAGAT AAGATAACAA GCTTTTAAGG 27010 .......... .......... .......... .......... .......... .......... 535 CCGCTCAACG TGGTTGGTGG CCTAGACAAT ACATAATGAG TCCGAAAATG CAATTAATAC 27070 .......... .......... .......... .......... .......... .......... 535 AAGAATTATT ACTATTATGT TACAAGCAAT ATACAAATTT GGAATATAGT CAAGTTTTTT 27130 .......... .......... .......... .......... .......... .......... 535 TGGTAAAACT CTTATCAGGT ATGTCAATTA AAATATTTAT ATTTTACTTA TATTATTTTT 27190 | | .......... .......... .......... .......... .......... .....TACAT 540 AATAGGATAA CTTTCACATA TAGCAAATAA AAAATTCATA TTTGTATGAT ATAGCAAAAT 27250 || || || |||| ||||| |||||||||| |||||||||| |||||||| ||||||| | TATTGGGCAA CTTTTACATA TAGCAAATAA AAAATTCATA TTTGTATG-- CTAGCAAACT 598 TTGTGTAATT ACGCTCCATA GCAAACATAA AAACTGTATA ATTCGCTATA CATATACAAT 27310 ||| ||||| |||| |||| |||||||| | |||||||||| ||| |||||| |||||||||| TTGCATAATT GCGCTGCATA GCAAACAT-A AAACTGTATA ATTTGCTATA CATATACAAT 657 AGCA-AACTG TATAAAATAA A 27330 | | || | | ||| | TGTATAATTC GCTGGCCTAA A 678 hqPGS_C08HBa0336I24.1+_SGN-E379333- (27186 27330) ******************************************************************************** EST sequence 215 -strand 687 n (File: SGN-E214252-) 1 CATTCAATTC CACACAAAAT TATGCNGACT GNATTGGGCT CTCTTTAAGA ATTTCCAAGC 61 ACTTTCCTTG TAGTGTTTGT CAAGTTTTTC CCAATACAAC ACATTAATTA ATGGAAATGT 121 TTGTTTAGTT GACTTTTCTT TTAATAATTG TGTTGGTCCA ATCATACTTG TTCAATTTAC 181 AGAATCAACA TATAAACACT TATATTTTAT CTATTTTAAC TTAAATATTA CTAGACTCAT 241 CTAACACACT TCTCAATACA TCAAATTTAA TAAAATTAAA GGATAATTTT ATAAATTACT 301 CTATTATTTT TTGTTTCTTC TAAAAGTTGC GCTCAATAAT GAATAACTTG GACAGAAGGA 361 GTATTATTTA TTTATGTTAT GGAGTTGACT CAGTGCCCGA CTTTTGGGTA AAGCCAATGA 421 AACACAAACC TCTACATCTC CTATTTTATC TTTTTACTCT CTTCTTTTAT TACTTGTTTA 481 TTTTTAATTT TAGTTATTTT TAATTGCTTA TCTATTTTTG ACAATATAAG AAAAAATAAG 541 AAAAAGAACA ATCTTCACCT ATATAAATAA CAAATATAAA ATTTATATTT GTATGATATA 601 ATAAAGTTCA CACAATACGC TCCATAGCAA ACATATATAT ATATATATAA TTCGCTATAC 661 ATATACAATT GAAGCAAATT ATATAAA Predicted gene structure (within gDNA segment 19578 to 28090): Exon 1 20395 20436 ( 42 n); cDNA 221 263 ( 43 n); score: 0.631 Intron 1 20437 20702 ( 266 n); Pd: 0.740 (s: 0.63), Pa: 0.363 (s: 0) Exon 2 20703 20723 ( 21 n); cDNA 264 284 ( 21 n); score: 0.619 Intron 2 20724 22311 (1588 n); Pd: 0.257 (s: 0), Pa: 0.000 (s: 0.60) Exon 3 22312 22378 ( 67 n); cDNA 285 347 ( 63 n); score: 0.582 Intron 3 22379 22800 ( 422 n); Pd: 0.264 (s: 0.56), Pa: 0.941 (s: 0) Exon 4 22801 22831 ( 31 n); cDNA 348 375 ( 28 n); score: 0.677 Intron 4 22832 23096 ( 265 n); Pd: 0.378 (s: 0), Pa: 0.986 (s: 0) Exon 5 23097 23105 ( 9 n); cDNA 376 384 ( 9 n); score: 0.667 Intron 5 23106 24315 (1210 n); Pd: 0.000 (s: 0), Pa: 0.330 (s: 0) Exon 6 24316 24322 ( 7 n); cDNA 385 391 ( 7 n); score: 1.000 Intron 6 24323 24884 ( 562 n); Pd: 0.000 (s: 0), Pa: 0.143 (s: 0.56) Exon 7 24885 24939 ( 55 n); cDNA 392 443 ( 52 n); score: 0.600 Intron 7 24940 25784 ( 845 n); Pd: 0.000 (s: 0.58), Pa: 0.000 (s: 0.62) Exon 8 25785 25869 ( 85 n); cDNA 444 523 ( 80 n); score: 0.624 Intron 8 25870 26477 ( 608 n); Pd: 0.900 (s: 0.60), Pa: 0.283 (s: 0.56) Exon 9 26478 26525 ( 48 n); cDNA 524 570 ( 47 n); score: 0.562 Intron 9 26526 27213 ( 688 n); Pd: 0.000 (s: 0.56), Pa: 0.000 (s: 0.78) Exon 10 27214 27279 ( 66 n); cDNA 571 635 ( 65 n); score: 0.833 MATCH C08HBa0336I24.1+ SGN-E214252- 0.659 431 0.627 C PGS_C08HBa0336I24.1+_SGN-E214252- (20395 20436,20703 20723,22312 22378,22801 22831,23097 23105,24316 24322,24885 24939,25785 25869,26478 26525,27214 27279) Alignment (genomic DNA sequence = upper lines): TTAGCTATTA TTGGGCTCAT CTTTAACAC- CCTTAATATA AAAGTTTATA TCTACATACA 20453 ||| ||||| | | ||||| || |||| || |||| | | TTAAATATTA CTAGACTCAT CTAACACACT TCTCAATACA TCA....... .......... 263 AATCTTTTAC AACTATCTAT TAAAGGATTG ATAGACTATA TAAGACATAA AAAAGATAAT 20513 .......... .......... .......... .......... .......... .......... 263 GCATGTATTA ATTTCATACT TTATTAATAT TTTATCTGTA TACTCTATAT ACATATATAT 20573 .......... .......... .......... .......... .......... .......... 263 ATTTGATACT AAAATATATA TAACTAATAT ATGGAAATAT ATGATATTAG TAATACAATT 20633 .......... .......... .......... .......... .......... .......... 263 ATTTATATTT ATTACTATTT TTATTCACCG TACTAAACAG TATTTCATTA TTTGGAAGTA 20693 .......... .......... .......... .......... .......... .......... 263 ATGGAAAAGG ACTGCATATA ATTAGAAGAG GTACAGCACA AGTGCCAAAA CCAATTAAAT 20753 | | ||| | |||| | || .........A ATTTAATAAA ATTAAAGGAT .......... .......... .......... 284 CCAATTCAAT TCTCACCAAC CTACTCCCAT CTAACTAGAG AAGGACATAC CTACCCATCT 20813 .......... .......... .......... .......... .......... .......... 284 TTACTACACA CAAACATAAT AAAAGAAGGG AAATTAGGGC AGGAGATAAA GGGGGGGTTT 20873 .......... .......... .......... .......... .......... .......... 284 GTATTATAAA ATATCTTATA AAATTATATT TATTTACCTT ACGAATTCGA ATAAACATAA 20933 .......... .......... .......... .......... .......... .......... 284 AAAAAATTAA ATTTAAAAAA TAAATTATTT AAAAGACGAA AATTAAAGAT TGACTTATTA 20993 .......... .......... .......... .......... .......... .......... 284 ATTTTAAGAT AGAAGACTAA AGGTTTGGTG CTTTTGTTTT GTTTTTTCTT CCTTTTTTTT 21053 .......... .......... .......... .......... .......... .......... 284 CTTTCTAAAA AAGGATTGTA AACTTGTAGT GCATAGATAT TCTATTTTCA TATCATCATT 21113 .......... .......... .......... .......... .......... .......... 284 TAATTTGAGT TGTTGATTTA TAGTGCATAG ATATTCTATT TTCATATCAT CATTAAATTT 21173 .......... .......... .......... .......... .......... .......... 284 GTACTCACTT TTTTCAAAAT ATTTAACTAA TAAACCATGC AACGTGATCT CGAGTCATCC 21233 .......... .......... .......... .......... .......... .......... 284 ATTATGTTTA AAAACTAGAT ATTAAAATAG GAGAATTTAG AATTATATAA ATATCCTGTA 21293 .......... .......... .......... .......... .......... .......... 284 TCGCGTATTT TTTAATTTAT ACTGTTGTGA AAATATATAC TAGTCTCATA CCTCACGATG 21353 .......... .......... .......... .......... .......... .......... 284 TATTATAATA GGTGTAGTTT TACTTTATAC ACATTGTGGA AAATTTTGTT CAAGGCTAAT 21413 .......... .......... .......... .......... .......... .......... 284 TTGATTTAGA TAACAAAATA TTCTTACTTC ATAAAAAGTG TACTACCAAT AAGTCATGGA 21473 .......... .......... .......... .......... .......... .......... 284 AAATAGTTAT TAAATAATTA ATTTGCAGTA TATATTTAAT TTCCATTAAC CATCAAAAAA 21533 .......... .......... .......... .......... .......... .......... 284 AAAAATATAA CATCGAAGTA AAAATAGTAA AAGGACCAAT ATTGCAAATT ATCAGTTAGT 21593 .......... .......... .......... .......... .......... .......... 284 GAATTTAAAA TAGTAAGTTC ATTATCATTT TTACAAGATT ATCAATTGAT GATTATAAGA 21653 .......... .......... .......... .......... .......... .......... 284 GTTTAAGATC TACAAATTAA TGATACACAA ATTATTTACA CAATTAAATT ACTTAAATGT 21713 .......... .......... .......... .......... .......... .......... 284 TAATTATATG TAAGTCTATT TATCAACCTA CAAGGTTAAA TTATATCAAC AAATTAACAA 21773 .......... .......... .......... .......... .......... .......... 284 CCATAGTTTT CAGTTTATTA CATCCGCATT GTCAACGTTA TTTGCAACAT TGTTTATGTA 21833 .......... .......... .......... .......... .......... .......... 284 TTTTATATCA TATTTATATG CATACATTGC ATATTGTGTC TACCTAGTCT ATAAGTGTAT 21893 .......... .......... .......... .......... .......... .......... 284 AATATATATT AACCTCGTAT AAAAGTGTAA AAATTTTACT AACTATAGTT ATAATCGAAC 21953 .......... .......... .......... .......... .......... .......... 284 TTCTTTTTCA ATTTTCAATT GTAGTTCTCT TGTTCAAAAT AAGTTCAGCT CTCGACTACA 22013 .......... .......... .......... .......... .......... .......... 284 TAACTTTGGG ATTTTGTAGA TAACCTCCTA ATAAAACTAT TTCCAATAAG TCTAAATTAC 22073 .......... .......... .......... .......... .......... .......... 284 AATTATTTCA AAAATCATAT TCCAAATTCA AATCCACTCA TTTAAATTTT TTCAAATAGA 22133 .......... .......... .......... .......... .......... .......... 284 ATCATCATCT AAATCTTGAA AACTCGATAT TTTAACCATG ATTGAGTTGT ATACACAGTA 22193 .......... .......... .......... .......... .......... .......... 284 ATTATTAATT AATAGAAATC ACAAACATCC AAATACCTGA GCTTTTCAAA TCCATTAATT 22253 .......... .......... .......... .......... .......... .......... 284 GTGTGACTCA CAATATAAAA TTCCTAACTA GAATCTTAAA AAGCCATACT GATTATAGAA 22313 || .......... .......... .......... .......... .......... ........AA 286 TTTAAAATAT GTCACTTAAA TTTTTTATTT TATTTATCTA AATGCGAAAA ACCTACAATA 22373 ||| | | || | || | |||||| ||| | || | |||| | | || | | TTTTATAAAT TACTCTATTA TTTTTTGTTT CTTCTA-AAA GTTGCGCTCA A--TA-ATGA 342 ACAAGGTTAA ATTTTCATTC TTATTCCTCT TGTGATCTAG ATAGTACTAG CACTATCTAC 22433 | || ATAAC..... .......... .......... .......... .......... .......... 347 AATAAATTTT CATTTCCAAT ACGAAGCAAA AGGTTATTGA AACTTGTATT TACAGAACTA 22493 .......... .......... .......... .......... .......... .......... 347 TGTCTTAGCA GAACTAGAAG TGTTAGCAGT GGGAAAAGAA AATGATTAGT AGTTAGAGTC 22553 .......... .......... .......... .......... .......... .......... 347 TTGTTACAAC TTGAGGGTTT GTAAGATTTA GAAGTTTTAG CAATGGAAAA AGAAAATAAA 22613 .......... .......... .......... .......... .......... .......... 347 GAGTAATTAG AGTCTTGTTA CTACTTGAGG ATGTTTTAAG AAAGGGGCAA GGGTCGAGAA 22673 .......... .......... .......... .......... .......... .......... 347 ACGAGGAGTA CTTGCATGAT TTTATTATTC TTTTTTTATA TTTTGAAGTG GACGTCGGGT 22733 .......... .......... .......... .......... .......... .......... 347 TGACTGATGA TGCATACAGT ACGTGTGGTT GTACTGATAC TATTCTTGCT ATGTTCTTTT 22793 .......... .......... .......... .......... .......... .......... 347 GACATAGTCT GGATGCAGAA CTCGTGATAT TTCTTTAGGT GAAGACAAAG AATTCCTCCA 22853 | | ||| ||||| || ||| || |||| .......T-T GGA--CAGAA GGAGTATTAT TTATTTAT.. .......... .......... 375 ACAGTTTCAA CTCTTCTTTC TGCATGGTGG GAGTTGTGTT CTTTATTTAA TCATAATTCA 22913 .......... .......... .......... .......... .......... .......... 375 TCGTTATTCG CAGTAGATCT TGTACCTGTT AAACTAGATC CATGGGGTTA TTAAATTTTT 22973 .......... .......... .......... .......... .......... .......... 375 TTACAAGTTT AACAAAGATT GTATTTAAAA ATATTATTTA TTTAATTTTC TTAACTTTGT 23033 .......... .......... .......... .......... .......... .......... 375 CGTCCGTCTT CTTTAATTTT CGCATGTTTT TCTCTATTAA GATATGAGGG TTCTCCTACT 23093 .......... .......... .......... .......... .......... .......... 375 TAGGTGTTAG AGTGGGTGTC CGCACGATCC AATGGGTTAG GTCGTGACAA TAACAATAAG 23153 || | | || ...GTTATGG AG........ .......... .......... .......... .......... 384 GTGTAAAGAC ACATTCGTAA AGTTAGAAGT AACACACATA AGAAAACCGT AATTATAAAT 23213 .......... .......... .......... .......... .......... .......... 384 GCAGGGGTCT GGGCGAAAAA TCATCGTAAT TGTTGTTGTT GCTACAAGGG GATGGAACAA 23273 .......... .......... .......... .......... .......... .......... 384 AGTGAAGGAT TCGATATGTG TTTAAGCAAA CTCTAGCAGG TTTAATTGGT AGCATTTCTG 23333 .......... .......... .......... .......... .......... .......... 384 ACTGGGTGTA TGTATATTGC GCGGGACTAA GAATGAATAA TGGACCGGCA CGAATCGGTA 23393 .......... .......... .......... .......... .......... .......... 384 TCGGACAGAA ACAGTACGAA TTGACTGATA CCGGAATAAA TCGGATTGAA ATTACCGGGA 23453 .......... .......... .......... .......... .......... .......... 384 CAACTACTCA ATCTGTTCCA TTCCACTGTA TATAGAGATG GAACCGAAAC AAATCGGACC 23513 .......... .......... .......... .......... .......... .......... 384 GAACTGAAAT GGAACGGGAT GGGATAAACG GGATAACTCA TCTAGTTATT TCAAAAAATG 23573 .......... .......... .......... .......... .......... .......... 384 ATTAAATTTT TTTTAGTTCT TTTATTTTTT GAATTACGAA AATATGAATA TTTTTTTTAT 23633 .......... .......... .......... .......... .......... .......... 384 TTTCTAAGTT TAAATTAATA GTTTTAAAAT TTATAATGTA ATTTTTTACT TAAGTTTATT 23693 .......... .......... .......... .......... .......... .......... 384 TTAAAGATAT ATTTTTAAAA TTTTTTACTT ATTAAGTTTG CAAGTTAAGT CTAATAAAGT 23753 .......... .......... .......... .......... .......... .......... 384 TTTCTTTTTA AAAAAATATT TTTGAGAATC TTTTGATGTT TATAAGTTTT TATTTATTAA 23813 .......... .......... .......... .......... .......... .......... 384 TATATTATAA CTTATAATGT ATATTTATAA CTTGTAATTT AAATAACTTA AATTTGTATC 23873 .......... .......... .......... .......... .......... .......... 384 TTTAAAAAAT TAAATAAATT ATAATATAAA TTAATGAATA AAAAATAATT AACTGAAATC 23933 .......... .......... .......... .......... .......... .......... 384 AAACCAAAAT AAATTATTTG ATATAAAGTA TTAGATTTTT TTTTAAAATA ATTTATTTGA 23993 .......... .......... .......... .......... .......... .......... 384 TGACCGTAAA ATGTGTCTTT GTTATAAAAA AATGTTAAAT GTGAATAACT TTGTCTCGAT 24053 .......... .......... .......... .......... .......... .......... 384 GAGTATAAAA TTCTCTAAAT AGTTTTTTGT TTATTAACAT GAGTCAATGA CATTTATATT 24113 .......... .......... .......... .......... .......... .......... 384 TCCCAAATTA TTATTGTAAG ATGCCATTAG GAGGTTAATA TTTATAAATT AGAAAGAATT 24173 .......... .......... .......... .......... .......... .......... 384 TCAAAATAAA TGATATATTA AAAGATATTA TTATTTTATA ATAGTAATGA AAAAATAATA 24233 .......... .......... .......... .......... .......... .......... 384 AACTTAATCA AAGAGAGATG TCATATATAT ATATATATAT ATATATATAT ATATATATAT 24293 .......... .......... .......... .......... .......... .......... 384 ATATATATAT ATATATATAA AGTTGACTCT GCAAGGGCTA ATGGGTTACT AGAGACTTTT 24353 ||||||| .......... .......... ..TTGACTC. .......... .......... .......... 391 ATTTGGGATT CAGGCTCAAT AACCATTTGT TAAATAAGAC TAGAAGTTAG AAGAACAGTT 24413 .......... .......... .......... .......... .......... .......... 391 ATGAAAATTA TGTGGAAGCT TTGATTTCAG TCATCTCTGT TCTGGTGTCT CGTCCCCTTC 24473 .......... .......... .......... .......... .......... .......... 391 TAGTTACCTT CTTCTATGTA ACCTATCTAT AATTAGTATG TTATTACTTT GTTGTGTATG 24533 .......... .......... .......... .......... .......... .......... 391 TTAGGACCGA AAATAAGCAG GTGTATATGC GGAAGCTAGC AACGCAAATT TCGAAAGACC 24593 .......... .......... .......... .......... .......... .......... 391 ATGAGTAAGA AGACAATGAG AAATATACCA AAAGACACAA ACATTTAACG TGGTTCGGTC 24653 .......... .......... .......... .......... .......... .......... 391 AATCGACCTA CGTCCACAAA GGAGATGAGC AATCCACCAT AAATATGAGA GTACAAAATA 24713 .......... .......... .......... .......... .......... .......... 391 CAGAGGGAAA CAACCTCAAC CGATTCACCC AGAATACATG GGAGGTTCAC ACAAGTGATA 24773 .......... .......... .......... .......... .......... .......... 391 ACGTATCAAG CTTGTGACCC ACAAATTCTC CCCCTAACCA AAACTCTCAA AACCCTTAAG 24833 .......... .......... .......... .......... .......... .......... 391 ACTACATTGT GAATGCTAAT TAAGTTAGAA GGAACATGAC TCTATTTATA GAGTCCTAAA 24893 ||| | | .......... .......... .......... .......... .......... .AGTGCCCGA 400 CCTTTTCCTA CAAGAAAAGG ATTAGTCAAT CCAAAACATT TTCCTACAAG GAAAACCTAT 24953 | ||| || ||| || | | | ||| || ||| | ||||| CTTTTGGGTA -AAGCCAATG A-AACACAAA CCTCTACA-T CTCCTA.... .......... 443 TTATGGTAAC AAATTTAGGG CAAATAAAAC CCAACAGTGT ATACTATACG TCATAATTTA 25013 .......... .......... .......... .......... .......... .......... 443 TATCCTGCGA ATATTATGTA TCAGTGTTTT GTATTGGGAA CCGAGTTTGT TTCGCAAGGC 25073 .......... .......... .......... .......... .......... .......... 443 CTACAAGATT AATAAAATTA AACAGAGGTC GTCACTAACA GTAAGAGTGG AAGACAACAT 25133 .......... .......... .......... .......... .......... .......... 443 AGTGAATTAT CGACATAGTA ATTAGTCCAG AATTTCAGAT ATGACTTATC ATTGGTATTA 25193 .......... .......... .......... .......... .......... .......... 443 AAAAAATCTT TTACAATAAT CCTAAATCCT AATCATGAAA AGTAAGTGCC TCATAATTTT 25253 .......... .......... .......... .......... .......... .......... 443 ATCCCTTCGA CGAATTTTTA TTATGATCAA TGCCCCACTA GCTAAATAGG CGTAAGAAAA 25313 .......... .......... .......... .......... .......... .......... 443 AGTTATCTGA ATAACGTTCA TCCGAATTGA GTTCCTGAGA TTTCAAAAAC ATAGAAACGG 25373 .......... .......... .......... .......... .......... .......... 443 GGATTAAGAA AAAAAAAGTA ATAGAATAGA GTGCAGAAAT TTACATATTA GAAGATTAAG 25433 .......... .......... .......... .......... .......... .......... 443 AAAATGATTT CCCCCCTCTT CAGATTAGCT TAATCAGAAT AGACAATATA AATATTTAGA 25493 .......... .......... .......... .......... .......... .......... 443 ATTTAGATTA GATTTTAGAG AATATGAAAT GATGGGTTAA TAGAAAATGG TAATTATTAG 25553 .......... .......... .......... .......... .......... .......... 443 GACACTTATT GTTTTAAATT ATAATTAAAA GGAAGAGGAT AAATTGGATA CATTGTAATT 25613 .......... .......... .......... .......... .......... .......... 443 AAATAAGATA AAAATTTCAG TGCGGCTTAC ATCGAGTTTA TTTAATGAAA TAAAATATAT 25673 .......... .......... .......... .......... .......... .......... 443 GTCAATTAAT TATGATTAAA TAAAATAAAT TATAAATTTA AACACGTGAC ATATATTTAT 25733 .......... .......... .......... .......... .......... .......... 443 TAACTTGATA TAAATATTCT ATACCAATAA GTTTTATCCT ATATATAGAT GTTGTATGTT 25793 || ||| || .......... .......... .......... .......... .......... .TTTTATCTT 452 TTTTTTCATT TTATTTGATC CCTATATTCA AAATAAAAAT TTTATTTTTA TTTATTTATT 25853 ||| || | || ||| || || | || | | ||| |||| || | |||| || TTTACTC-TC TTCTTTTATT ACT-TGTT-- TATTTTTAAT TTTAGTTATT TTTAATT-GC 507 TTAATCATTC TAGATAATAT CTTTTTCATT CATTTACTTT TGTTTGTTCA CAATGCACTT 25913 ||| ||| | || | TTATCTATTT TTGACA.... .......... .......... .......... .......... 523 TACACTTTCT TTTTTTTTAA AAAAGACTAC GTAATAAATA AAGTACTTAG TATAATTATA 25973 .......... .......... .......... .......... .......... .......... 523 ATGACTATTA ACATTTCAAA AGTTCTTTTG AAAAATTATT TAAGATATTA AAAATTAGTT 26033 .......... .......... .......... .......... .......... .......... 523 AATGTAAGCA TTAAGAATTA GTTGAGTCAA TTTAAGTGCA TATTGTCAAG TATTGGAATG 26093 .......... .......... .......... .......... .......... .......... 523 GTAGGTTGGG CTAATATATA ATCATTTTAC CTATCAAATT AAATTATACA ACTACTTACA 26153 .......... .......... .......... .......... .......... .......... 523 TGACCTAAAA GATGTGAAAC AATAAAAGGA CCTTTTCGTA CTTACAATAA TGATATAGTC 26213 .......... .......... .......... .......... .......... .......... 523 CCATGGATTA TATATTAATG TATTATATAG TTTTGCCCAC AATAATTTAG TAGGGTGTAT 26273 .......... .......... .......... .......... .......... .......... 523 AAAAATAATA TTAAATATAA TATAATAATA GTATTGAATA TTAATATTAG TAATATAAAT 26333 .......... .......... .......... .......... .......... .......... 523 ATTACTTATG TTTATATTAA TTATGTTAAA AATATTTTTT ACGTTATATT TAATTTGATA 26393 .......... .......... .......... .......... .......... .......... 523 TATTAAAAAT AACATGTATT ATATAATATT TTATTTTAAA AAAATATTTA ATTACAAAAA 26453 .......... .......... .......... .......... .......... .......... 523 TATAATCCAT AAATACGTGA AAAGGTGTGA GAAAAAGTTT TCAAGGGACA AAACATTAAA 26513 | | | |||||| | || || || | | | .......... .......... ....ATATAA GAAAAAATAA GAAAAAGAAC AATCTTCACC 559 TACACTAAAC TAATCAAGTA ATACATTTAT GCTAAATGAT CAGAATTTGG GTAGAATTTT 26573 || | |||| | TATA-TAAAT AA........ .......... .......... .......... .......... 570 TTTTAAAAAT ATTTTTTAAT TATAAAATAA CAAGAATATT ATAGTCTTTT TAATTTTCTT 26633 .......... .......... .......... .......... .......... .......... 570 GCCAAATACT GATCAATTTT TTTCTTTCTT TCTATACTAT GTTGAATATG CACCAATTAT 26693 .......... .......... .......... .......... .......... .......... 570 AATGAAATCC AGCTACTCCC TCCGTTCACA ATTATATGTC ATATTACGGT TATTTATATA 26753 .......... .......... .......... .......... .......... .......... 570 TTCCTTAACA AAAATTTAAT ATAGGGTGTA ATTTGATTAA TATAATTCTA TTATAACAAG 26813 .......... .......... .......... .......... .......... .......... 570 AATATCAAAA GTCTACATAT CTATCTAATT AAACTAAACT ATCATTAAGA GCAAATTTTT 26873 .......... .......... .......... .......... .......... .......... 570 TTTAAAAATA ATTAATTACT TTTTAATTAT TTAAATTAAC AATTAATCTT AAACATATAT 26933 .......... .......... .......... .......... .......... .......... 570 TTTTAATATA TCTATCAAAC AATTGTGGAC GAAGAAAATA CAAAGCTCGA ACAAGATAAG 26993 .......... .......... .......... .......... .......... .......... 570 ATAACAAGCT TTTAAGGCCG CTCAACGTGG TTGGTGGCCT AGACAATACA TAATGAGTCC 27053 .......... .......... .......... .......... .......... .......... 570 GAAAATGCAA TTAATACAAG AATTATTACT ATTATGTTAC AAGCAATATA CAAATTTGGA 27113 .......... .......... .......... .......... .......... .......... 570 ATATAGTCAA GTTTTTTTGG TAAAACTCTT ATCAGGTATG TCAATTAAAA TATTTATATT 27173 .......... .......... .......... .......... .......... .......... 570 TTACTTATAT TATTTTTAAT AGGATAACTT TCACATATAG CAAATAAAAA ATTCATATTT 27233 |||||| ||| ||| |||||| .......... .......... .......... .......... CAAATATAAA ATTTATATTT 590 GTATGATATA GCAAAATTTG TGTAATTACG CTCCATAGCA AACATA 27279 |||||||||| ||| || || |||| |||||||||| |||||| GTATGATATA ATAAAGTTCA CACAA-TACG CTCCATAGCA AACATA 635 hqPGS_C08HBa0336I24.1+_SGN-E214252- (27214 27279) ******************************************************************************** EST sequence 38 +strand 318 n (File: SGN-E278390+) 1 GCACGAGCTC ACAGGGCATT TTCTCTCGGG TTTCTTCGTC TCTAATATTA TGGGAGGAAC 61 TGAAGAACTC TTAGAGGAAC CTATCAATGT TGAAGTGGAG CTTCTAGATG TTCAAGACCA 121 AATAAAATAT CTGCTAGACC GACAAGAGAA ATTGCATGAG AGACAATTCG AACTTAAAGC 181 TCTTGTGGAA AGTTGTGAAT CATCTAGTGG CCGGGCTTCC GATGCTGCTG CTGTTCCAGT 241 AGATGATTGG TCCAGGCCGT TTGAGTGGGA CTCTTAAGCT GATGACATTA GGTTTAATGT 301 TTTTGGGATA TCTAAATA Predicted gene structure (within gDNA segment 31218 to 36541): Exon 1 31888 31996 ( 109 n); cDNA 8 116 ( 109 n); score: 0.982 Intron 1 31997 35621 (3625 n); Pd: 0.987 (s: 0.98), Pa: 0.954 (s: 1.00) Exon 2 35622 35823 ( 202 n); cDNA 117 318 ( 202 n); score: 0.990 MATCH C08HBa0336I24.1+ SGN-E278390+ 0.987 311 0.978 C PGS_C08HBa0336I24.1+_SGN-E278390+ (31888 31996,35622 35823) Alignment (genomic DNA sequence = upper lines): CTCACAGGGC ATTTTCTCTC GGGTTTCTTC GTCTCTAATA TTATGGGAAG AACTGAAGAA 31947 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| CTCACAGGGC ATTTTCTCTC GGGTTTCTTC GTCTCTAATA TTATGGGAGG AACTGAAGAA 67 CTCTTAGAGG AACTTATCAA TGTTGAAGTG GAGCTTCTAG ATGTTCAAGG TTAGCTTAGT 32007 |||||||||| ||| |||||| |||||||||| |||||||||| ||||||||| CTCTTAGAGG AACCTATCAA TGTTGAAGTG GAGCTTCTAG ATGTTCAAG. .......... 116 ATACAGTATT TGTTTGCAAT AACATTGATT CAAAAGTTAA TTTGTTGTTT AATTCTATTA 32067 .......... .......... .......... .......... .......... .......... 116 AGGAAATTAA ATTCCTGATA TTTCTGGTTG TTTATGGTCG TAATAAGGAA GTTGTTGATG 32127 .......... .......... .......... .......... .......... .......... 116 GCAGATTTTC TTGAATTGTA ATGCGGGTTG TATAATTTAA CAACTCTTAA CATAATTGCA 32187 .......... .......... .......... .......... .......... .......... 116 TGAAGCCCCT GCTTTTTTGT ATTCATTGAC TTATGATTGT TCTTTGGAAT TTTCAAGTGA 32247 .......... .......... .......... .......... .......... .......... 116 AAATAAAGTA TTTTTTTGAA TGTTCTTGGT GTTTGGGCTA GCTTGCATGC ACCTCGATTA 32307 .......... .......... .......... .......... .......... .......... 116 ATTTCACCTG AGAGTCTCAC CTCCCGTCAG TGGGGCTAGC TTGCGTGCAC CTCGATTAAT 32367 .......... .......... .......... .......... .......... .......... 116 TTCATGTGAT TCTGCCAACT CCCATCTGCA ACAAGTAGTG GGTAATGTTG TCCACTGAGG 32427 .......... .......... .......... .......... .......... .......... 116 CGATGCCAGA TGAGAATAAA TCACCTAGTG TTTTGTTGTC TTTTCAATTT TGGATAAAGG 32487 .......... .......... .......... .......... .......... .......... 116 ATGTTGGCCA TATGTCTTGA TAGTTATACA ACTCTCATCA CACAGGCAAG AGTGGTATAT 32547 .......... .......... .......... .......... .......... .......... 116 TTAGCCAATC GACCCTTTTT TGTTTTTTGG TCTTTGTTGA GATTTGAAGA TACTGCCACC 32607 .......... .......... .......... .......... .......... .......... 116 ACCCACCAAC AACAAGTGCG AGGTAATTTT GTCCACCAAA ATGAGAAGAA ATCACCTAGT 32667 .......... .......... .......... .......... .......... .......... 116 GTTTTTTTTG TCTTTGCTAG GATTTGAACT TGAAACCTGA TGGTTCTCCC ACTTTATTGA 32727 .......... .......... .......... .......... .......... .......... 116 TCACTAAGTC ACACTCTTCG GTGCTTGTAA ATAAAGCATT TTTATTATCC TAAATAACAT 32787 .......... .......... .......... .......... .......... .......... 116 TTGTGGCTCT TTCTAGCGTC TTAAGTTAGG TCTTAAAGCA ATTTGCCACC TCAGATCTTG 32847 .......... .......... .......... .......... .......... .......... 116 GAATAGGTTT TGGTTTCTAT AGAACAAGAA TAACTATGTA CTTTGAGTTG TCAACTAGGT 32907 .......... .......... .......... .......... .......... .......... 116 TGACAATGTC TAGAGAAAAT GGAGAAGAAA GAGAAAGAAT ATTGCTACAT GGGGTGGTGG 32967 .......... .......... .......... .......... .......... .......... 116 GATAATAATA TGATCTTATC ACTGTCAACA AAGTTGGGGA GCATTTTGTT GAATCAAGGT 33027 .......... .......... .......... .......... .......... .......... 116 ACTTGTTGGC GACAATTAGA AAAGTTTGAG ATTTGTTACT TTAGCTGTCT TCGAACTTTC 33087 .......... .......... .......... .......... .......... .......... 116 TAACAGATTT CAATATATTT GACTTGATCA CCAAAGTCTT AATTTTTTTT TGTTTACAGA 33147 .......... .......... .......... .......... .......... .......... 116 TAGGTCATTC GTGTATAAGG TGTTCAATAC ACATTAGGTA TCATACATTA ATATATGAAA 33207 .......... .......... .......... .......... .......... .......... 116 ATTATAGACA AGCAGAGAGA GAAAGTACAT TATTGGCTTA TTGTAGTTGA GATACTTTTT 33267 .......... .......... .......... .......... .......... .......... 116 AGTATTTCGT TTTCAGGAAT CTGACAATAT TAGTTACTAT GCTACCTGGT AGTATTTGTT 33327 .......... .......... .......... .......... .......... .......... 116 ACAATCAAGC TAGAACAGAA GCTGGATGGG GTTTTAATTT GTATTGCTAT GAACTGACGT 33387 .......... .......... .......... .......... .......... .......... 116 GGAGCTTCCT GCTCTCTCTT TTAGTGGCTA TATAAAAGAT TATATTATAC ATATATATGT 33447 .......... .......... .......... .......... .......... .......... 116 ATTATCCTTT ATTATATGCA TACGATTGTT ACTTAGCTGT TTAGAGAAAT CAGGTTTCAT 33507 .......... .......... .......... .......... .......... .......... 116 TCCCGAATTG AAAATGTTTA TCCAATGGGT AGAGCTGATG ACAGGAGATT TCGAAATCAT 33567 .......... .......... .......... .......... .......... .......... 116 TATTTCCCTT ATAAATACAT TAAAGATCAT AAGTGTTCTT TCTTAATAAC AGAGAAATCC 33627 .......... .......... .......... .......... .......... .......... 116 CCAAGGGACA GCTGGTGCAC AGTTCGGAAT TTGGAGGATA ATGAGTTTGT TCCTTGATAG 33687 .......... .......... .......... .......... .......... .......... 116 ACCCAAATTA CACATTAAAA CTGGTGGAAG TGGTCATTAT TAATCATATG ACTCAATGAG 33747 .......... .......... .......... .......... .......... .......... 116 GTTGCAGTCG AATCCCACAG GGAATATGAC GATGAACAAT TTACTTTTTA AGTGTAAACC 33807 .......... .......... .......... .......... .......... .......... 116 TGACTTAAAG TCTAATATTT CTAATAATAA TGGGTAAAAG GGTTAGAGTT TAAGACTATA 33867 .......... .......... .......... .......... .......... .......... 116 ATTTCAAGTT CATTTGTTTA TTGACTATTA ATTAATACAC GAATGATCAG AGATTTTCTA 33927 .......... .......... .......... .......... .......... .......... 116 TAACAATTGG GTAAGGGACT AGGATTGGTG TTTCCTAATG AAGGTAATGG CAAGGAGTAT 33987 .......... .......... .......... .......... .......... .......... 116 GTGTTTTTGC TAATTTAATA ATTCAATCTC ATTATTCAAT GATGTCTAAA TTTCTTTCAA 34047 .......... .......... .......... .......... .......... .......... 116 AGGTTTCTTG AATCATTCAA TAGATTTCAC ACATAGCTTC TCTCGAATCT AAAGTGTGTG 34107 .......... .......... .......... .......... .......... .......... 116 AATGCAAAAA ATTAATTTAT CCCAAGTTTC CCATATGAAG TTGCCTTTCT CATAAAATAT 34167 .......... .......... .......... .......... .......... .......... 116 ATCTCCAATC TCTAGGTTGA ATTTATTTAT TAGGTTTTAA AGCATCAAAT CCTTGCCATT 34227 .......... .......... .......... .......... .......... .......... 116 TGCACTTCTC CAAATCCGAA CTTCCTTTTT CAAGCAAAGC TAAAGATCAT ACGACTCTAC 34287 .......... .......... .......... .......... .......... .......... 116 CTTATTTTTG CAACCATCTA ACAAAAGATG GAAGTAAATA GAAAACATCG ATTTCATGAA 34347 .......... .......... .......... .......... .......... .......... 116 ATAGAAGTAC TAATGCTCAT ACCCATTACA TAACCCGAAA GAGTTACCAC AACCCTCTAC 34407 .......... .......... .......... .......... .......... .......... 116 GATGCTTAGC TAGCCGTTAA AGATAAGGAA ACTACAATAA AGACAGAAAC ATGGAGTTTT 34467 .......... .......... .......... .......... .......... .......... 116 ATGATCAATG ACAACAAAAG GAGGATTTGT CTCATAATGT TTAACAACCT CCAAGAACAT 34527 .......... .......... .......... .......... .......... .......... 116 TATTCAATGG TGTGGGGACT AAAAAGCTGA ACCAGAACAC ATCATAAAAC AAAGGGGGAT 34587 .......... .......... .......... .......... .......... .......... 116 GACAAGGTAT AAATTTGATT TGCTCAGTCA ACTATGACAA ATGGCTCCAC AACGAGGGAG 34647 .......... .......... .......... .......... .......... .......... 116 AAAGAATCGT GAAGGGTAAG AAACTCAAAG CATTGTCTGA ATGAAAGTGA AAATCATAAA 34707 .......... .......... .......... .......... .......... .......... 116 TTGGAATGTG CAGGGGCTTA AGGACAATGA AGAAAGAGAC ACCATTATAG TGTTGGTCAA 34767 .......... .......... .......... .......... .......... .......... 116 GAAGTGGAAG CGAAATGTTT AATATCTACA AGAAACAAAT ACTGAAGAAT GGTCTACTGT 34827 .......... .......... .......... .......... .......... .......... 116 CACTGTAACA CAAATTTTGG GATCTAGATG GGTCAATTTG GTGGATTTAA AATCATATGG 34887 .......... .......... .......... .......... .......... .......... 116 AAGGAGCAGG GGTATCACAA TATTCTGGGA TAAGAGTCGA TGTAATCGCA TAGATTTTTC 34947 .......... .......... .......... .......... .......... .......... 116 GGCAAGATAC ATGCTCCATC ACTGCAATGT TTGGAGGGCT ACATGGAGAT GTCAAATGAT 35007 .......... .......... .......... .......... .......... .......... 116 GCTTTACTGG TGTATATTGG CCACATTCAA ATTGGGAAAG AACATATTTT GGGTTGATTT 35067 .......... .......... .......... .......... .......... .......... 116 AGCTGAATTG GAGGTTATGG ACTGATCACT GGGCAGTTGG AGGTTCATTT GCATTAGAAG 35127 .......... .......... .......... .......... .......... .......... 116 ATCAAGAGCA ATGAGATATG TTTAATTTAA TCATCCATTT TTTTGGTGTC ACATCAAATT 35187 .......... .......... .......... .......... .......... .......... 116 TGTTCTCTTT TTGTAAATCA CCAACTTGTC AAGATTGTGT GATGTTTTCG AAGAACAGAA 35247 .......... .......... .......... .......... .......... .......... 116 CTCTGACACT ATTGCATGTG TGACCGATTT CTCCAGCTTG TCTTTATGGA CACGGTGTCC 35307 .......... .......... .......... .......... .......... .......... 116 AACATGGATT ACTGTTTTTT GGAAGTGTTA TTCTACATGG CTTTAGTCAA TGTGATTCAT 35367 .......... .......... .......... .......... .......... .......... 116 ATCACTCTGA TAACATGTTA TTTTGGACAA TAAATCCTCA CACATCTGCC ATTTTTGTTA 35427 .......... .......... .......... .......... .......... .......... 116 ACAAAGAGTT TCAGAGCCTT GCTATAACCA ATCTTAAAAT GATTTTGTGT TGATTTTTAC 35487 .......... .......... .......... .......... .......... .......... 116 TTGCCGTTTT CATTGTGTTG TTTTTTTTGT TTTTGTGGTT GAGTTCTGTC CTCAGATGTT 35547 .......... .......... .......... .......... .......... .......... 116 TGATCTTTCA ATTCTTCTGC AATGTACTTT ATTCGTCCAT CTGAAATTAT GGTCTTCAAT 35607 .......... .......... .......... .......... .......... .......... 116 GTCTTCTTAT CCAGACCAAA TAAAATATCT GCTAGACCGA CAAGAGAAAT TGCATGAGAG 35667 |||||| |||||||||| |||||||||| |||||||||| |||||||||| .......... ....ACCAAA TAAAATATCT GCTAGACCGA CAAGAGAAAT TGCATGAGAG 162 ACAATTCGAA CTTAAAGCTC TTGTGGAAAG TTGTGAATCA TCTAGTGGCC GGGCTTCCGA 35727 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAATTCGAA CTTAAAGCTC TTGTGGAAAG TTGTGAATCA TCTAGTGGCC GGGCTTCCGA 222 TGCTGCTGCT GTTCCAGTAG ATGATTGGTC CAGGCCGTTT GAGTGGGACT CTCAAGCTGA 35787 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| TGCTGCTGCT GTTCCAGTAG ATGATTGGTC CAGGCCGTTT GAGTGGGACT CTTAAGCTGA 282 TGACATTAGG TTTAATGTTT TTGGCATATC TAAATA 35823 |||||||||| |||||||||| |||| ||||| |||||| TGACATTAGG TTTAATGTTT TTGGGATATC TAAATA 318 hqPGS_C08HBa0336I24.1+_SGN-E278390+ (31888 31996,35622 35823) ******************************************************************************** EST sequence 20 +strand 416 n (File: SGN-E325351+) 1 CTTGGTATAT TAAAGACTCA GTTTCCTAAT GATTCCATGG TCGCTCTAAC AGCAACTGCA 61 ACAAAGAAAG TACAGGATGA TCTGATGGAG ATGCTTCACA TTCCAAGATG TGTTAAGTTT 121 GTTAGTTCAG TGAACAGACC CAACCTTTAT TACATGGTAC GTGAGAAGTC ATCTATAGCA 181 AAGACAGTGG TTGATGAAAT TGCTGAATAT ATTCAATCAT CATATCCAAA TAATGAATCT 241 GGGATAGTTT ATTGCTTTTC CAGGAAGGAG TGTGAACAGG TTGCACAAGA ATTACGTGAA 301 AGGGGAATTT CGGCTGATCA CTATCATGCG GATATGGATG TGAATGCTCG TGAGAGAGTT 361 CATCTAAGGT GGAGTAATGG AAAGCTGCAA GTCATTGTGG GGACGGTGGC ATTTGG Predicted gene structure (within gDNA segment 48847 to 55143): Exon 1 49447 49497 ( 51 n); cDNA 1 51 ( 51 n); score: 0.961 Intron 1 49498 49597 ( 100 n); Pd: 0.917 (s: 0.96), Pa: 0.967 (s: 1.00) Exon 2 49598 49702 ( 105 n); cDNA 52 156 ( 105 n); score: 1.000 Intron 2 49703 49787 ( 85 n); Pd: 0.000 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 3 49788 49910 ( 123 n); cDNA 157 279 ( 123 n); score: 1.000 Intron 3 49911 51462 (1552 n); Pd: 0.265 (s: 1.00), Pa: 0.999 (s: 1.00) Exon 4 51463 51551 ( 89 n); cDNA 280 368 ( 89 n); score: 1.000 Intron 4 51552 54404 (2853 n); Pd: 0.999 (s: 1.00), Pa: 0.983 (s: 0) Exon 5 54405 54441 ( 37 n); cDNA 369 405 ( 37 n); score: 1.000 Intron 5 54442 54517 ( 76 n); Pd: 0.983 (s: 0), Pa: 0.998 (s: 0) Exon 6 54518 54528 ( 11 n); cDNA 406 416 ( 11 n); score: 1.000 MATCH C08HBa0336I24.1+ SGN-E325351+ 0.995 416 1.000 C PGS_C08HBa0336I24.1+_SGN-E325351+ (49447 49497,49598 49702,49788 49910,51463 51551,54405 54441,54518 54528) Alignment (genomic DNA sequence = upper lines): CTTGGTATAT TAAAGACTCA GTTTCCTAAT GTTCCCATGG TCGCTCTAAC AGTATGTATT 49506 |||||||||| |||||||||| |||||||||| | | |||||| |||||||||| | CTTGGTATAT TAAAGACTCA GTTTCCTAAT GATTCCATGG TCGCTCTAAC A......... 51 AACTCATAGC TTGAAGAGAA CCAGTGTCCT TTGTTTAATT TATCAATAAA TAATTTCTGA 49566 .......... .......... .......... .......... .......... .......... 51 ACAGCAGCTG GACTTGGATG CTTTTTTCCA GGCAACTGCA ACAAAGAAAG TACAGGATGA 49626 ||||||||| |||||||||| |||||||||| .......... .......... .......... .GCAACTGCA ACAAAGAAAG TACAGGATGA 80 TCTGATGGAG ATGCTTCACA TTCCAAGATG TGTTAAGTTT GTTAGTTCAG TGAACAGACC 49686 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTGATGGAG ATGCTTCACA TTCCAAGATG TGTTAAGTTT GTTAGTTCAG TGAACAGACC 140 CAACCTTTAT TACATGGTAT AGCTGTACTA AAGTAAATTA AAATTATAAC GTTTGCTGCG 49746 |||||||||| |||||| CAACCTTTAT TACATG.... .......... .......... .......... .......... 156 GTGGTCATTT TATGTTTTAA ACTATTTGAT CCATTTTGCA GGTACGTGAG AAGTCATCTA 49806 ||||||||| |||||||||| .......... .......... .......... .......... .GTACGTGAG AAGTCATCTA 175 TAGCAAAGAC AGTGGTTGAT GAAATTGCTG AATATATTCA ATCATCATAT CCAAATAATG 49866 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGCAAAGAC AGTGGTTGAT GAAATTGCTG AATATATTCA ATCATCATAT CCAAATAATG 235 AATCTGGGAT AGTTTATTGC TTTTCCAGGA AGGAGTGTGA ACAGGTACAG TGCACTAGCT 49926 |||||||||| |||||||||| |||||||||| |||||||||| |||| AATCTGGGAT AGTTTATTGC TTTTCCAGGA AGGAGTGTGA ACAG...... .......... 279 CTGTCGTGTA AGACTATCTC CTGTGCTAAT TTTTTCTTTA AATATGGTCT TAACTGCACT 49986 .......... .......... .......... .......... .......... .......... 279 TGGGAACATA TGTCTAATGG TTCTTGATTG GATGTGCTAT AGTTTTACAG AGCATTCTGT 50046 .......... .......... .......... .......... .......... .......... 279 GCTAGAAGTT CACTGCTCGG GTATCTGACA GAATTCTTGA GATCTGGATA TTGCTTAGAT 50106 .......... .......... .......... .......... .......... .......... 279 GAACTAATTT ATAGCATATT ACCACCCTGT GAAAACTCTT ATCATTTCTA CCATGTACTA 50166 .......... .......... .......... .......... .......... .......... 279 GGTCGGCCAA CTGTGATATG TGATCAATTG TTAAATAAAA TATGTTGCAT GGAGGTGAAG 50226 .......... .......... .......... .......... .......... .......... 279 AGGTGAGGGA AGTAGTGGGG AGTTGCGCAA CAGACAAAGC TCGGGGGCTA GATGGGTTCA 50286 .......... .......... .......... .......... .......... .......... 279 CTTAAGCTTT TCTCTAAAAT GTTGGAGGAT AGGTAAAGGT GAGTTGTTGG AGACTATTGC 50346 .......... .......... .......... .......... .......... .......... 279 AGAATTCCAA GAAACAGCGA GTTTGAGAGA AGTGTTAATG ATTCATTTGC TACCATTGTG 50406 .......... .......... .......... .......... .......... .......... 279 CTAAAGAAGG AAAAGAGTGA TGAGTTTTAA GGGATTATAG GCCTATTTAG TTTGGTAGGA 50466 .......... .......... .......... .......... .......... .......... 279 ATATCTAATT GATTATCTCT AAGACGCTTT CTAATACAAC TATAAAAGGT TTTGGATGAC 50526 .......... .......... .......... .......... .......... .......... 279 ATGGGAGTGC TTTTGAAGGG GTGGAAGAAG ATTTTGAAAA ATTGTAATGT AGTATTTTAT 50586 .......... .......... .......... .......... .......... .......... 279 CTCTAATTTC TTTTTAGTAT ACTTGTGAGG TCCTTAATTG TATAGAGGAT TGTATCTTTT 50646 .......... .......... .......... .......... .......... .......... 279 TTGTTGAGAA CCATATTTTG GTGTAGGTTC TCTTCTTTTT GGCACCACGG ACACCACGGC 50706 .......... .......... .......... .......... .......... .......... 279 CATCAAAAAA AAAAATATGG GCTTAAGTTT TCTCTAGTTT TGGAGCTTAA TGATATAAAA 50766 .......... .......... .......... .......... .......... .......... 279 TCAAATTATT CATAGTTTCA ACCGTAGTGC AATAAAGAGC AACAAGGTTC ATTCTCATTG 50826 .......... .......... .......... .......... .......... .......... 279 CATTTAGATA GATAATTATG GTAGATATAA TGTGGCTAAT CTGGGAATGT TCTGTTGGTC 50886 .......... .......... .......... .......... .......... .......... 279 TACTTTCACT TGGTAAAACA TTGTGATAAA CATTAGTAAA ACATTGTGGT GCATAAGTGG 50946 .......... .......... .......... .......... .......... .......... 279 CTCAGATATG GTCTATTGTC TAGAGTATTA ACGCCGGAAC CCCGGAACAT TCTGAGCTCA 51006 .......... .......... .......... .......... .......... .......... 279 TTATCTTTTT GTTTGGACTG GCAGCTCTCA CAGAAAACAA AATTAGTTTA TGACATTGCC 51066 .......... .......... .......... .......... .......... .......... 279 TTCCACAATT GTGTGTATGT GTGTGATAGA GAGAGAGAGA GAGAGAGAGA GAGTTTCTTA 51126 .......... .......... .......... .......... .......... .......... 279 AAACGGAGTA GTTAGTCTAG TTTCACTGCA AGATGAGAAT ACAGCAATGT TTATCCTTCC 51186 .......... .......... .......... .......... .......... .......... 279 AGAAGTGTGT TTTTATCTAT TAGCTTTGAC AACATATACT GTACATGGCG GTTAACAATA 51246 .......... .......... .......... .......... .......... .......... 279 ATCTAGTCTT GTTCCGCAGC AATTTTGGTC AGTAATGAAC AATATAATAA CGTTTTAGGG 51306 .......... .......... .......... .......... .......... .......... 279 TAGTAGGTAA ATAGCATGTA ATTCTTATGT TCCTTGTTAT AACTTATTCT GACCCACATC 51366 .......... .......... .......... .......... .......... .......... 279 ATATTCACAT TTTGGTGTTT TGACTTCCAA TTCAGTTTTG TTGTTATTGT TACATCTCAA 51426 .......... .......... .......... .......... .......... .......... 279 ACTTTTTTTT TCACCTTATT TGATGACAAA ATGTAGGTTG CACAAGAATT ACGTGAAAGG 51486 |||| |||||||||| |||||||||| .......... .......... .......... ......GTTG CACAAGAATT ACGTGAAAGG 303 GGAATTTCGG CTGATCACTA TCATGCGGAT ATGGATGTGA ATGCTCGTGA GAGAGTTCAT 51546 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAATTTCGG CTGATCACTA TCATGCGGAT ATGGATGTGA ATGCTCGTGA GAGAGTTCAT 363 CTAAGGTATG AAAATTTTCT TTTGATATTT CTGTCTGTTC ATACTATGTA TACAACTTCC 51606 ||||| CTAAG..... .......... .......... .......... .......... .......... 368 TTTCGCTGTA ATTGTTTATG AATATTGTCT TTGCTAACAG GTGTCTTGTT TGCCTTTATA 51666 .......... .......... .......... .......... .......... .......... 368 GTGATCTCGT TTGGCTTTTT TATATGAAGT GGTAAATTTT ATTATTGTGA GGGAAAAATC 51726 .......... .......... .......... .......... .......... .......... 368 TCCCGTATAA CAAAAGTAGA AAACCTTCTA AAACAATATA GTTTTCTATG AATGACAACT 51786 .......... .......... .......... .......... .......... .......... 368 CATTCTTCTT AAATAAAGGA ACTTCATGGG TGCACTAAAA GGAAATAAGC CAAATATATC 51846 .......... .......... .......... .......... .......... .......... 368 AGGAGAATTT TCATGTAAAC TACCACTCCC AAGCCAGTTC TCCTTAGAAA GACAAATTAA 51906 .......... .......... .......... .......... .......... .......... 368 ATAAGTAACA GTATATCTTC TTTAGTAGCT TAAGCTTTTA AAATGAGATG GTCACACGTT 51966 .......... .......... .......... .......... .......... .......... 368 GAAGTACGGT CGTAGAGCTC GCAGAGGTCT TGGATTTGAG TCTCACCACC ACTCATTACC 52026 .......... .......... .......... .......... .......... .......... 368 ACAAAGAATT TTCACGTGCA TGACCCATGA AGAAGAATTA GGTTAGCTGT GATGTTTATT 52086 .......... .......... .......... .......... .......... .......... 368 GAAGATATAA TTAAGTAGAA TAAAATTGTA CTCTTTCTAA CAGTTTAAAC ATTCACATAC 52146 .......... .......... .......... .......... .......... .......... 368 TTTAGCAGTT AAGTATCTTA CATTGGTTGA GGGAATGAGA TGTTGTCTCA TTATATGATC 52206 .......... .......... .......... .......... .......... .......... 368 TAGGACAATG CTCACTGCTA CTATTTGAGG TTGAATCCGA AGTCTATTTT CTTAATGTGG 52266 .......... .......... .......... .......... .......... .......... 368 TATCAGAGTC GTGTTAATTC ATATTTTTGG TTTATCCATT GTCCGTATCA ATTGAGGGAT 52326 .......... .......... .......... .......... .......... .......... 368 AAGGTTATTG ACTCCTTATA TGGTTTTGAG CCATCGTTAT TTCATTTGAA TGTCACACAT 52386 .......... .......... .......... .......... .......... .......... 368 TCCCTGAGGG ATTGGACTAT TGTCTCCTTA TATGTTGTTG GACGATCCTC ACCTTATGAG 52446 .......... .......... .......... .......... .......... .......... 368 CTTGTTTTTG GGTTGGACTA GGCCAAGAGG TTAATATTCA TAACATCATT TCAAAATGAG 52506 .......... .......... .......... .......... .......... .......... 368 ACCCATCCCC TATTTCGATT TACCAAATTT TGGGCCCTCG TGATATACTC AGGACTCTAG 52566 .......... .......... .......... .......... .......... .......... 368 ATATCCATCC CTAGGCATGT GGGAAAGAAA TGGAGGGTAG AATGTTCCAC AAAGATTAAG 52626 .......... .......... .......... .......... .......... .......... 368 AAAATGGGTT GTTCGTGGGA ATGCTTACCT CATGAGCTAA CTTTTAGGTT AAGTCGAATC 52686 .......... .......... .......... .......... .......... .......... 368 GGAGGGACAT TTTCTCTTAG CAAATATCAT ATGTAGTAGT CGTCTCATAG CCTTCCACTT 52746 .......... .......... .......... .......... .......... .......... 368 GAATAAGAAT CCTCTTCGCA TCCAAATTTT GGTTAATTGT TTACTATAGT TGGTAATTAT 52806 .......... .......... .......... .......... .......... .......... 368 GATAATATAA TTTGCTCTTT TTATTGAAAA ACTTCCTTCT TAAAGTTATC TTTTGGGCAT 52866 .......... .......... .......... .......... .......... .......... 368 GTTCTCACGC TAATGTTAGA TATCTAATCT ACATGTTACT TTTCCTTGCA TCTATAAGTG 52926 .......... .......... .......... .......... .......... .......... 368 CATCCTCCAT ATCCAAGATC ACAAAAGGCC GCTTACGTGT TTGTATCTTG TTCACCATTG 52986 .......... .......... .......... .......... .......... .......... 368 AAGTGTGCCC GTTATTTCTC ACCAAGTTCT GTGTCTTTAT AGTATTGACC AAGGTGAAAT 53046 .......... .......... .......... .......... .......... .......... 368 TTTATATAAT GTGCTGTGTG CCTCCCATAG TTTATTTGGC TCGAGAGTTG GTTGTCAGAG 53106 .......... .......... .......... .......... .......... .......... 368 TGTTTTGTGG TAAAGACGTA AAGTATACTT TCCAGTTTCT TTTCCTGATA TTTAGGCTTT 53166 .......... .......... .......... .......... .......... .......... 368 GCTTTGAGCA AGTAGAAGGA TTATTTTCAG GTATACTATC AGGATTCCTC CATAGAGAAG 53226 .......... .......... .......... .......... .......... .......... 368 GATCAGAAAT TACTTTTTGT TAGGAGTTCT GAAGAGGAAG CTACGACAAA CAAAGGTGAG 53286 .......... .......... .......... .......... .......... .......... 368 AATTGAGATT AGATATGGTG GTGGGCGATA ATTTAGAGCC TGTTTGGATT GACTTAATTT 53346 .......... .......... .......... .......... .......... .......... 368 TGAATTTTTA GCTTTAAATA CTTTTGTAGT GTTTGGGTAT GATAAAAGGT GCTTTTAAAC 53406 .......... .......... .......... .......... .......... .......... 368 ACTTATTTTA AAGCCAAAAT AAAAAAAATT GGCCCAAAGT CATAAGTTAG AAATCCTAAC 53466 .......... .......... .......... .......... .......... .......... 368 TTATAACTTT CGGCTTATAA ATCATAAACT AAAAGTCCAT CCAAACAGGC TCTTAGGCTA 53526 .......... .......... .......... .......... .......... .......... 368 TAAAGTTTGG AATAAAAGAA GATAGAATAG CGTCCAGATG CTTTTGATTT CTGCCATTGA 53586 .......... .......... .......... .......... .......... .......... 368 TAGTGGTTAT GTGTTTTGAT AGAGAAGAGT AGCAGGTATG TAGCTCAGCG TTAATTTTAA 53646 .......... .......... .......... .......... .......... .......... 368 CAGTTCTTCG TGGAGACACA TTTGTTTTAG GGCTTAAGGA CCAAAATTGT CAAATTTTAC 53706 .......... .......... .......... .......... .......... .......... 368 CATATATTAC TCTTTCTATT AGGTGTCATA TATCAAGGAC CAAAAGAATC CACCTCCATA 53766 .......... .......... .......... .......... .......... .......... 368 CATCAAGGAC CATTTTGATC ATTAAGGACC ATTTTGATAC ATTAAAAAGC ATTTTGATCA 53826 .......... .......... .......... .......... .......... .......... 368 GTTTCTCTAG TTAGTTTATA ATGTTTTGCT TGATGAGATC ATTTTCTTCG TCTGATGCCT 53886 .......... .......... .......... .......... .......... .......... 368 TGTATCATTG AGAATATTTA TGGGAAAATA TTTCACCTTA ATGATGGTTT TAAGTCATTT 53946 .......... .......... .......... .......... .......... .......... 368 TCCCTTATAA ATATCACAAT TGTTACTCTA TTTCACATAT TTTAAATAAA CACTACTGTT 54006 .......... .......... .......... .......... .......... .......... 368 ACTCCTAATA TTCAGAATTA TCACCGAGAC ATCATCTCAT GCTCCATATC GACCTTCTGC 54066 .......... .......... .......... .......... .......... .......... 368 GTTTATTTCA AATAACACAG CCCTTAAGTA CAGAAAATCA TCACTGGAAC ATCAACCCTT 54126 .......... .......... .......... .......... .......... .......... 368 GCCCATGCTT CTGCTATTAC CATGTGGTAT TTCCTACCTT TGAACCCAGC TAATTTCTTG 54186 .......... .......... .......... .......... .......... .......... 368 AAAATGATCT AACAAATAGT TTTCCGAAAT TATTATTCAT CAAAAATATT TAATATTATA 54246 .......... .......... .......... .......... .......... .......... 368 AAACACACCT TAAGAAATGA TATTATCTAC AGCGTATGAG CTGCCAAATT GTGATTTATT 54306 .......... .......... .......... .......... .......... .......... 368 TTTATTATTG TATCTGTATG GTTATAATTC ATGGTATCAT TTTTTTGATT GTAAAATCTT 54366 .......... .......... .......... .......... .......... .......... 368 ATTCTAATTC AACAAGTAAC TTATGCTCGA TGTCATAGGT GGAGTAATGG AAAGCTGCAA 54426 || |||||||||| |||||||||| .......... .......... .......... ........GT GGAGTAATGG AAAGCTGCAA 390 GTCATTGTGG GGACGGTATG TATCATGAAG TGCCCTGACT TCTTACTTTT TTATGGCAAT 54486 |||||||||| ||||| GTCATTGTGG GGACG..... .......... .......... .......... .......... 405 TATCATATTT GGAAGTGTTA TTCTTTGTCA GGTGGCATTT GG 54528 ||||||||| || .......... .......... .......... .GTGGCATTT GG 416 hqPGS_C08HBa0336I24.1+_SGN-E325351+ (49447 49497,49598 49702,49788 49910,51463 51551,54405 54441,54518 54528) ******************************************************************************** EST sequence 5 +strand 660 n (File: SGN-E550286+) 1 AATTGGATGA CTAAGAATGT CATAACACCC TATGGATGTT CAGTCTGGAG AGCTATTAGG 61 AATCTTTGGC CAAAGATACA AATCAGAACT AAGGTGAGGA TAGGAAATGG GCAGAAAACC 121 TCTTTTGGCA TGACAAGTGG GCAGGGCTTT GAACAATGAA ACAACAACAT CTGGAGCTAT 181 ACACTCTAAG CCAGCAACAA GAAGCCACAG TTGCCATGAT GTGGACTGGA CAAGGATGGA 241 ATCTATATCT AAGGAGATAT CTGAATGATT GGGAGATTGG GAGGATAACA GAATTCTATA 301 ACTCAGTAGC AAGTTTCAAC AATCTGACTG ACGAAGTGGA CAGACTAGAA TTGAACAGAA 361 ACAGTAAGGG AATTTTTTCT GTCAAATCTG CATACAGGGA GCTAATGTAG AAGTGGTGAA 421 GGAAAGAGAT TGGCCTTGGA AGATGATATG GAAACCAAAA ATTCCCTACA AAGTTAACTG 481 TTTCATCTGG CTTCTGGCCA AAGAAGCAGT GTTAACTCAT GATAACCTGA ACAAAAGGGG 541 TCACCAGCTA ACCGCTGGCT GTTTTTTATG TGGGGGACAA GTTGAGACAA TCAACCATCT 601 TTTTTTGCAC TGCAAATGGA CAGACCAGCT TTGGAGGATG TTCATCAGTT GGAAAGGGAT Predicted gene structure (within gDNA segment 59731 to 61600): Exon 1 60331 60990 ( 660 n); cDNA 1 660 ( 660 n); score: 0.998 MATCH C08HBa0336I24.1+ SGN-E550286+ 0.998 660 1.000 C PGS_C08HBa0336I24.1+_SGN-E550286+ (60331 60990) Alignment (genomic DNA sequence = upper lines): AATTGGATGA CTAAGAATGT CATAACACCC TATGGATGTT CAGTCTGGAG AGCTATTAGG 60390 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTGGATGA CTAAGAATGT CATAACACCC TATGGATGTT CAGTCTGGAG AGCTATTAGG 60 AATCTTTGGC CAAAGATACA AATCAGAACT AAGGTGAGGA TAGGAAATGG GCAGAAAACC 60450 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATCTTTGGC CAAAGATACA AATCAGAACT AAGGTGAGGA TAGGAAATGG GCAGAAAACC 120 TCTTTTGGCA TGACAAGTGG GCAGGGCTTT GAACAATGAA ACAACAACAT CTGGAGCTAT 60510 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTTTGGCA TGACAAGTGG GCAGGGCTTT GAACAATGAA ACAACAACAT CTGGAGCTAT 180 ACACTCTAAG CCAGCAACAA GAAGCCACAG TTGCCATGAT GTGGACTGGA CAAGGATGGA 60570 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACACTCTAAG CCAGCAACAA GAAGCCACAG TTGCCATGAT GTGGACTGGA CAAGGATGGA 240 ATCTATATCT AAGGAGATAT CTGAATGATT GGGAGATTGG GAGGATAACA GAATTCTATA 60630 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCTATATCT AAGGAGATAT CTGAATGATT GGGAGATTGG GAGGATAACA GAATTCTATA 300 ACTCAGTAGC AAGTTTCAAC AATCTGACTG ACGAAGTGGA CAGACTAGAA TTGAACAGAA 60690 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTCAGTAGC AAGTTTCAAC AATCTGACTG ACGAAGTGGA CAGACTAGAA TTGAACAGAA 360 ACAGTAAGGG AATTTTTTCT GTCAAATCTG CATACAGGGA GCTAATGTAG AAGTGGTGAA 60750 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAGTAAGGG AATTTTTTCT GTCAAATCTG CATACAGGGA GCTAATGTAG AAGTGGTGAA 420 GGAAAGAGAT TGGCCTTGGA AGATGATATG GAAACCAAAA ATTCCCTACA AAGTTAACTG 60810 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAAAGAGAT TGGCCTTGGA AGATGATATG GAAACCAAAA ATTCCCTACA AAGTTAACTG 480 TTTCATCTGG CTTCTGGCCA AAGAAGCAGT GTTAACTCAT GATAACCTGA ACAAAAGGGG 60870 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCATCTGG CTTCTGGCCA AAGAAGCAGT GTTAACTCAT GATAACCTGA ACAAAAGGGG 540 TCACCAGCTA ACCGCTGGCT GTTTTTTATG TGGGGAACAA GTTGAGACAA TCAACCATCT 60930 |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| TCACCAGCTA ACCGCTGGCT GTTTTTTATG TGGGGGACAA GTTGAGACAA TCAACCATCT 600 TTTTTTGCAC TGCAAATGGA CAGACCAGCT TTGGAGGATG TTCATCAGTT GGAAAGGGAT 60990 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTTTGCAC TGCAAATGGA CAGACCAGCT TTGGAGGATG TTCATCAGTT GGAAAGGGAT 660 hqPGS_C08HBa0336I24.1+_SGN-E550286+ (60331 60990) ******************************************************************************** EST sequence 16 +strand 681 n (File: SGN-E389715+) 1 CGGGCTGCAG GAATTTCGCA CGAGAATTGG ATGACTAAGA ATGTCATAAC ACCCTATGGA 61 TGTTCAGTCT GGAGAGCTAT TAGGAATCTT TGGCCAAAGA TACAAATCAG AACTAAGGTG 121 AGGATAGGAA ATGGGCAGAA AACCTCTTTT GGCATGACAA GTGGGCAGGG CTTTGAACAA 181 TGAAACAACA ACATCTGGAG CTATACACTC TAAGCCAGCA ACAAGAAGCC ACAGTTGCCA 241 TGATGTGGAC TGGACAAGGA TGGAATCTAT ATCTAAGGAG ATATCTGAAT GATTGGGAGA 301 TTGGGAGGAT AACAGAATTC TATAACTCAG TAGCAAGTTT CAACAATCTG ACTGACGAAG 361 TGGACAGACT AGAATTGAAC AGAAACAGTA AGGGAATTTT TTCTGTCAAA TCTGCATACA 421 GGGAGCTAAT GTAGAAGTGG TGAAGGAAAG AGATTGGCCT TGGAAGATGA TATGGAAACC 481 AAAAATTCCC TACAAAGTTA ACTGTTTCAT CTGGCTTCTG GCCAAAGAAG CAGTGTTAAC 541 TCATGATAAC CTGAACAAAA GGGGTCACCA GCTAACCGCT GGCTGTTTTT TATGTGGGGA 601 ACAAGTTGAG ACAATCACCA TCTTTTTTTG CNACTGCAAT GGACAGACCA GCTTTGGAGG 661 ATGTTCATCA GTTGGAAAGG G Predicted gene structure (within gDNA segment 59491 to 61598): Exon 1 60331 60988 ( 658 n); cDNA 25 681 ( 657 n); score: 0.993 MATCH C08HBa0336I24.1+ SGN-E389715+ 0.993 658 0.966 C PGS_C08HBa0336I24.1+_SGN-E389715+ (60331 60988) Alignment (genomic DNA sequence = upper lines): AATTGGATGA CTAAGAATGT CATAACACCC TATGGATGTT CAGTCTGGAG AGCTATTAGG 60390 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTGGATGA CTAAGAATGT CATAACACCC TATGGATGTT CAGTCTGGAG AGCTATTAGG 84 AATCTTTGGC CAAAGATACA AATCAGAACT AAGGTGAGGA TAGGAAATGG GCAGAAAACC 60450 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATCTTTGGC CAAAGATACA AATCAGAACT AAGGTGAGGA TAGGAAATGG GCAGAAAACC 144 TCTTTTGGCA TGACAAGTGG GCAGGGCTTT GAACAATGAA ACAACAACAT CTGGAGCTAT 60510 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTTTTGGCA TGACAAGTGG GCAGGGCTTT GAACAATGAA ACAACAACAT CTGGAGCTAT 204 ACACTCTAAG CCAGCAACAA GAAGCCACAG TTGCCATGAT GTGGACTGGA CAAGGATGGA 60570 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACACTCTAAG CCAGCAACAA GAAGCCACAG TTGCCATGAT GTGGACTGGA CAAGGATGGA 264 ATCTATATCT AAGGAGATAT CTGAATGATT GGGAGATTGG GAGGATAACA GAATTCTATA 60630 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCTATATCT AAGGAGATAT CTGAATGATT GGGAGATTGG GAGGATAACA GAATTCTATA 324 ACTCAGTAGC AAGTTTCAAC AATCTGACTG ACGAAGTGGA CAGACTAGAA TTGAACAGAA 60690 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTCAGTAGC AAGTTTCAAC AATCTGACTG ACGAAGTGGA CAGACTAGAA TTGAACAGAA 384 ACAGTAAGGG AATTTTTTCT GTCAAATCTG CATACAGGGA GCTAATGTAG AAGTGGTGAA 60750 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAGTAAGGG AATTTTTTCT GTCAAATCTG CATACAGGGA GCTAATGTAG AAGTGGTGAA 444 GGAAAGAGAT TGGCCTTGGA AGATGATATG GAAACCAAAA ATTCCCTACA AAGTTAACTG 60810 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAAAGAGAT TGGCCTTGGA AGATGATATG GAAACCAAAA ATTCCCTACA AAGTTAACTG 504 TTTCATCTGG CTTCTGGCCA AAGAAGCAGT GTTAACTCAT GATAACCTGA ACAAAAGGGG 60870 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCATCTGG CTTCTGGCCA AAGAAGCAGT GTTAACTCAT GATAACCTGA ACAAAAGGGG 564 TCACCAGCTA ACCGCTGGCT GTTTTTTATG TGGGGAACAA GTTGAGACAA TCAACCATCT 60930 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| TCACCAGCTA ACCGCTGGCT GTTTTTTATG TGGGGAACAA GTTGAGACAA TC-ACCATCT 623 TTTTTTGC-A CTGCAAATGG ACAGACCAGC TTTGGAGGAT GTTCATCAGT TGGAAAGGG 60988 |||||||| | |||| ||||| |||||||||| |||||||||| |||||||||| ||||||||| TTTTTTGCNA CTGC-AATGG ACAGACCAGC TTTGGAGGAT GTTCATCAGT TGGAAAGGG 681 hqPGS_C08HBa0336I24.1+_SGN-E389715+ (60331 60988) ******************************************************************************** EST sequence 25 +strand 479 n (File: SGN-E228350+) 1 ATTGGATGAC TAAGAATGTC ATAACACCCT ATGGATGTTC AGTCTGGAGA GCTATTAGGA 61 ATCTTTGGCC AAAGATACAA ATCAGAACTA AGGTGAGGAT AGGAAATGGG CAGAAAACCT 121 CTTTTGGCAT GACAAGTGGG CAGGGCTTTG AACAATGAAA CAACAACATC TGGAGCTATA 181 CACTCTAAGC CAGCAACAAG AAGCCACAGT TGCCATGATG TGGACTGGAC AAGGATGGAA 241 TCTATATCTA AGGAGATATC TGAATGATTG GGAGATTGGG AGGATAACAG AATTCTATAA 301 CTCAGTAGCA AGTTTCAACA ATCTGACTGA CGAAGTGGAC AGACTAGAAT TGAACAGAAA 361 CAGTAAGGGA ATTTTTTCTG TCAAATCTGC ATACAGGGAG CTAATGTAGA AGTGGTGAAG 421 GAAAGAGATT GGCCTTGGAA GATGATATGG AAACCAAAAA TTCCCTACAA AGTTAACTG Predicted gene structure (within gDNA segment 59732 to 61420): Exon 1 60332 60810 ( 479 n); cDNA 1 479 ( 479 n); score: 1.000 MATCH C08HBa0336I24.1+ SGN-E228350+ 1.000 479 1.000 C PGS_C08HBa0336I24.1+_SGN-E228350+ (60332 60810) Alignment (genomic DNA sequence = upper lines): ATTGGATGAC TAAGAATGTC ATAACACCCT ATGGATGTTC AGTCTGGAGA GCTATTAGGA 60391 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGGATGAC TAAGAATGTC ATAACACCCT ATGGATGTTC AGTCTGGAGA GCTATTAGGA 60 ATCTTTGGCC AAAGATACAA ATCAGAACTA AGGTGAGGAT AGGAAATGGG CAGAAAACCT 60451 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCTTTGGCC AAAGATACAA ATCAGAACTA AGGTGAGGAT AGGAAATGGG CAGAAAACCT 120 CTTTTGGCAT GACAAGTGGG CAGGGCTTTG AACAATGAAA CAACAACATC TGGAGCTATA 60511 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTTGGCAT GACAAGTGGG CAGGGCTTTG AACAATGAAA CAACAACATC TGGAGCTATA 180 CACTCTAAGC CAGCAACAAG AAGCCACAGT TGCCATGATG TGGACTGGAC AAGGATGGAA 60571 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACTCTAAGC CAGCAACAAG AAGCCACAGT TGCCATGATG TGGACTGGAC AAGGATGGAA 240 TCTATATCTA AGGAGATATC TGAATGATTG GGAGATTGGG AGGATAACAG AATTCTATAA 60631 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTATATCTA AGGAGATATC TGAATGATTG GGAGATTGGG AGGATAACAG AATTCTATAA 300 CTCAGTAGCA AGTTTCAACA ATCTGACTGA CGAAGTGGAC AGACTAGAAT TGAACAGAAA 60691 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCAGTAGCA AGTTTCAACA ATCTGACTGA CGAAGTGGAC AGACTAGAAT TGAACAGAAA 360 CAGTAAGGGA ATTTTTTCTG TCAAATCTGC ATACAGGGAG CTAATGTAGA AGTGGTGAAG 60751 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGTAAGGGA ATTTTTTCTG TCAAATCTGC ATACAGGGAG CTAATGTAGA AGTGGTGAAG 420 GAAAGAGATT GGCCTTGGAA GATGATATGG AAACCAAAAA TTCCCTACAA AGTTAACTG 60810 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| GAAAGAGATT GGCCTTGGAA GATGATATGG AAACCAAAAA TTCCCTACAA AGTTAACTG 479 hqPGS_C08HBa0336I24.1+_SGN-E228350+ (60332 60810) ******************************************************************************** EST sequence 93 -strand 541 n (File: SGN-E550080-) 1 CAGGGAGCTA ATGTAGAAGT GGTGAAGGAA AGAGATTGGC CTTGGAAGAT GATATGGAAA 61 CCAAAAATTC CCTACAAAGT TAACTGTTTC ATCTGGCTTC TGGCCAAAGA AGCAGTGTTA 121 ACTCATGATA ACCTGAACAA AAGGGGTCAC CAGCTAACCG CTGGCTGTTT TTTATGTGGG 181 GAACAAGTTG AGACAATCAA CCATCTTTTT TTGCACTGCA AATGGACAGA CCAGCTTTGG 241 AGGATGTTCA TCAGTTGGAA AGGGATTAGT TGGGTGAAAC CTGGAAGCAT TGCAGACATT 301 CTAAGATGCT GGAATGTGGA TGGTAATGTG TGCAAGAAGG AAGAAAAATG GAAGATCGTC 361 CCAGCATGTA TTTGGTGGTC AATTTGGATT CAGAGGAACA AAAGGTGCTT TGAGGGGACT 421 CAAAACAAGA TTCAGAATCT TAAAATGAAT TGTTTATGCC TTTATTATTT TTGGTGTGAG 481 CAAAAACTAC TAGCTCAAAC AGAAGATATT TGTGATGTTT TTAACTTTTT AAAGGCACAG 541 A Predicted gene structure (within gDNA segment 60115 to 61964): Exon 1 60725 61266 ( 542 n); cDNA 1 541 ( 541 n); score: 0.996 MATCH C08HBa0336I24.1+ SGN-E550080- 0.996 542 1.002 C PGS_C08HBa0336I24.1+_SGN-E550080- (60725 61266) Alignment (genomic DNA sequence = upper lines): CAGGGAGCTA ATGTAGAAGT GGTGAAGGAA AGAGATTGGC CTTGGAAGAT GATATGGAAA 60784 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGGGAGCTA ATGTAGAAGT GGTGAAGGAA AGAGATTGGC CTTGGAAGAT GATATGGAAA 60 CCAAAAATTC CCTACAAAGT TAACTGTTTC ATCTGGCTTC TGGCCAAAGA AGCAGTGTTA 60844 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAAAAATTC CCTACAAAGT TAACTGTTTC ATCTGGCTTC TGGCCAAAGA AGCAGTGTTA 120 ACTCATGATA ACCTGAACAA AAGGGGTCAC CAGCTAACCG CTGGCTGTTT TTTATGTGGG 60904 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTCATGATA ACCTGAACAA AAGGGGTCAC CAGCTAACCG CTGGCTGTTT TTTATGTGGG 180 GAACAAGTTG AGACAATCAA CCATCTTTTT TTGCACTGCA AATGGACAGA CCAGCTTTGG 60964 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAACAAGTTG AGACAATCAA CCATCTTTTT TTGCACTGCA AATGGACAGA CCAGCTTTGG 240 AGGATGTTCA TCAGTTGGAA AGGGATTAGT TGGGTGAAAC CTGGAAGCAT TGCAGACATT 61024 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGATGTTCA TCAGTTGGAA AGGGATTAGT TGGGTGAAAC CTGGAAGCAT TGCAGACATT 300 CTAAGATGCT GGAATGTGGA TGGTAATGTG TGCAAGAAGG AAGAAAAATG GAAGATCGTC 61084 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAAGATGCT GGAATGTGGA TGGTAATGTG TGCAAGAAGG AAGAAAAATG GAAGATCGTC 360 CCAGCATGTA TTTGGTGGTC AATTTGGATT CAGAGGAACA AAAGGTGCTT TGAGGGGACT 61144 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAGCATGTA TTTGGTGGTC AATTTGGATT CAGAGGAACA AAAGGTGCTT TGAGGGGACT 420 CAAAACAAGA TTCAGAATCT TAAAATGAAT TGTTTATGCC TTTATTATTT TTGGTGTGAG 61204 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAACAAGA TTCAGAATCT TAAAATGAAT TGTTTATGCC TTTATTATTT TTGGTGTGAG 480 CAAAAACTAC TAGCTCAAAC AGAAGATATT TGTGATGTTT TTAACTTTTT GTAAGGCACA 61264 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| CAAAAACTAC TAGCTCAAAC AGAAGATATT TGTGATGTTT TTAACTTTTT -AAAGGCACA 539 GA 61266 || GA 541 hqPGS_C08HBa0336I24.1+_SGN-E550080- (60725 61266) ******************************************************************************** EST sequence 280 -strand 387 n (File: SGN-E278535-) 1 ATCAGTACCT TGAGTGCACA GAAACCAAAA TCAATTGAAG AGTTGGAGAA GATAATTGGC 61 AAGTTGAAGA CTGAAAAATA CGGAGGCAGA ATTCTTGAAG AGATTGCTAG TTATGAGTCT 121 GATCCCCAAA AAAATAATGC AGATGGAAGC AAAGAGACCA AAGGCAATAC TGTTAAGAAG 181 TTGAAAACCA AGAAAACTCT TGTAGTCCTT GAAAGTAGTG AAGATGAAAC ATGAATTTCT 241 GCATCTTTTT TAGAAATATG ATCATACTAA GTACTCTTAT TGTTAATTTT GTTGGATCAT 301 ACTGGATATG TTATTGATCA TATAGTGCTT GGCCGTAACA TATGTATCTG ATAAACCTTT 361 TGACCCTAAA AAAAAAAAAA AAAAAAA Predicted gene structure (within gDNA segment 66099 to 68777): Exon 1 66709 66750 ( 42 n); cDNA 1 42 ( 42 n); score: 1.000 Intron 1 66751 67652 ( 902 n); Pd: 0.954 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 2 67653 67977 ( 325 n); cDNA 43 367 ( 325 n); score: 0.991 PPA cDNA 368 387 MATCH C08HBa0336I24.1+ SGN-E278535- 0.991 367 0.948 C PGS_C08HBa0336I24.1+_SGN-E278535- (66709 66750,67653 67977) Alignment (genomic DNA sequence = upper lines): ATCAGTACCT TGAGTGCACA GAAACCAAAA TCAATTGAAG AGGTGTATTC CTACTGCTTT 66768 |||||||||| |||||||||| |||||||||| |||||||||| || ATCAGTACCT TGAGTGCACA GAAACCAAAA TCAATTGAAG AG........ .......... 42 GCTTACAGAG TATAATGTTT TAACTTCTAA CTTTTGGTGT TTCATTACTT GTCATCTGAT 66828 .......... .......... .......... .......... .......... .......... 42 TATAGTTTAT AAAATCTTCA GAAAAGAGGA ATTTGAACTT ATTTAACTCC AATAGTCTGG 66888 .......... .......... .......... .......... .......... .......... 42 TATTCCTTTC CATCCATGTC AAAGTAATAT CTACTTTGCT AAAAGGAAAA TCTAGTGACT 66948 .......... .......... .......... .......... .......... .......... 42 GGTACTGTTA TCCACTAAAA TTCTGAACCC CGCTTTTACT TTAGAACAAC AACACAATAC 67008 .......... .......... .......... .......... .......... .......... 42 CTAGTGTAAT CTCACAAGTG GGGTCTGCGG AGGGTAGGAT GTATGCCGAC CTTACCGTTA 67068 .......... .......... .......... .......... .......... .......... 42 CCTTTGTGGG GTAGGAAGGC TGGACCCTGC TTTTACCTCT CTCATGAAAT GATTACTTTT 67128 .......... .......... .......... .......... .......... .......... 42 ATCTTTATTC TAAAAAATCA AGAAAGAAAG CAATGGCCGC TTCCATAATT TTCCCAACTC 67188 .......... .......... .......... .......... .......... .......... 42 TTGCTGTAGT AATACTGCCA AATCAAGTAG ACATTCATTG AGACAGATAA CATAAAAGTG 67248 .......... .......... .......... .......... .......... .......... 42 AGTCTTAGCA TCTGATTATA AGTGGAGTGT CAAATAGGAA ATTTCTTACT CTTTGGAGAA 67308 .......... .......... .......... .......... .......... .......... 42 ATGGACAGTT TTTGACTATG GCCAAAGAAG AGAAGTAGGA CAGTTAAGTC GACATAGAGA 67368 .......... .......... .......... .......... .......... .......... 42 GTTCAGATTT TTCAATGGTA TTACCTGAGG TTGCAGGACT TTGCAGAGTA ATTGAACTCC 67428 .......... .......... .......... .......... .......... .......... 42 CTGCATGCTT CATAGGCATG CGACATATTT ATCCCAGTGC ATGCTCATTT ATGGCCTGTT 67488 .......... .......... .......... .......... .......... .......... 42 AAGTAGGTGA GGTGTAGAGA TGCAATGTTT CTTTAATTGT AAAAGTAAAT ATCCTTCTAG 67548 .......... .......... .......... .......... .......... .......... 42 CTAAGAGCTG AGACTGCTAT AGTTTACAAT ATCGCGTTGA TAGCACAGCT TTAGATCTTC 67608 .......... .......... .......... .......... .......... .......... 42 TCATGCGATG CAGTCATCTG AACAGTACTT TGTGTTTTAT GCAGTTGGAG AAGATAATTG 67668 |||||| |||||||||| .......... .......... .......... .......... ....TTGGAG AAGATAATTG 58 GCAAGTTGAA GACTGAAAAA TACGGAGGCA GAATTCTTGA AGAGATTGCT AGTTATGAGT 67728 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAAGTTGAA GACTGAAAAA TACGGAGGCA GAATTCTTGA AGAGATTGCT AGTTATGAGT 118 CTGATCCCCA AAAAAATAAT GCAGATGGAA GCAAAGAGAC CAAAGGCAAT ACTGTTAAGA 67788 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGATCCCCA AAAAAATAAT GCAGATGGAA GCAAAGAGAC CAAAGGCAAT ACTGTTAAGA 178 AGTTGAAAAC CAAGAAAACT CTTGTAGTCC TTGAAAGTAG TGAAGATGAA ACATGAATTT 67848 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTGAAAAC CAAGAAAACT CTTGTAGTCC TTGAAAGTAG TGAAGATGAA ACATGAATTT 238 CTGCATCTTT TTTAGAAATA TGATCATACT AAGTACTCTT ATTGTTAATT TTGTTGGATC 67908 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGCATCTTT TTTAGAAATA TGATCATACT AAGTACTCTT ATTGTTAATT TTGTTGGATC 298 ATACTGGATA TGTTATTGAT CATATAGTAC TTATCCGTAA CATATGTATC TGATAAACCT 67968 |||||||||| |||||||||| |||||||| | || |||||| |||||||||| |||||||||| ATACTGGATA TGTTATTGAT CATATAGTGC TTGGCCGTAA CATATGTATC TGATAAACCT 358 TTTGACCCT 67977 ||||||||| TTTGACCCT 367 hqPGS_C08HBa0336I24.1+_SGN-E278535- (66709 66750,67653 67977) ******************************************************************************** EST sequence 57 +strand 475 n (File: SGN-E317641+) 1 TTAAAAGTAG TTTCCTACAG TGAATTGTAT GGGTGGACGA TGGATGAAAT AGTGAAATTG 61 ATAGGCTTGA AGAACAACTG CACATTTTGT GGTGTTTTCC GTCGGCAGGC CCTTGATCGA 121 GGTGCTGCAC TGCTAAAGGT AGACAAGCTC GTTACCGGAC ATAATGCAGA TGATATTGCT 181 GAAACAGTCC TTTTAAATAT TTTACGAGGT GATATTGCAA GATTGGGTAG ATGCACGTCG 241 ATAATTACTG GAGAAGATGG GCCAATACCG AGATGCAAGC CCTTCAAATA CACTTATGAG 301 AAGGAAATTG TCATATATCC TTTTCTTTGA TAGTATTTTA TTGGGCTACC CCTACCTATA 361 TACTTCAAAT GGCTGCATCT TCCCTAGTAA AATCATTGCT TTGCGATTGT GATCACTTAT 421 GACTATGCTG CCTTAACTTG CTGTTACGTA TGCATACTTT AAAAAGCTGG ACTAC Predicted gene structure (within gDNA segment 72331 to 74480): Exon 1 72931 73038 ( 108 n); cDNA 1 108 ( 108 n); score: 1.000 Intron 1 73039 73410 ( 372 n); Pd: 0.960 (s: 1.00), Pa: 0.992 (s: 1.00) Exon 2 73411 73523 ( 113 n); cDNA 109 221 ( 113 n); score: 1.000 Intron 2 73524 73616 ( 93 n); Pd: 0.985 (s: 1.00), Pa: 0.480 (s: 1.00) Exon 3 73617 73870 ( 254 n); cDNA 222 475 ( 254 n); score: 0.996 MATCH C08HBa0336I24.1+ SGN-E317641+ 0.998 475 1.000 C PGS_C08HBa0336I24.1+_SGN-E317641+ (72931 73038,73411 73523,73617 73870) Alignment (genomic DNA sequence = upper lines): TTAAAAGTAG TTTCCTACAG TGAATTGTAT GGGTGGACGA TGGATGAAAT AGTGAAATTG 72990 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAAAAGTAG TTTCCTACAG TGAATTGTAT GGGTGGACGA TGGATGAAAT AGTGAAATTG 60 ATAGGCTTGA AGAACAACTG CACATTTTGT GGTGTTTTCC GTCGGCAGGT AATTCGACAC 73050 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| ATAGGCTTGA AGAACAACTG CACATTTTGT GGTGTTTTCC GTCGGCAG.. .......... 108 ACTTGTCTTT GGGTTTGAGG ATTTTTTTTT TTTTGCATAG ATGTCTCCAA CACCTGGCAC 73110 .......... .......... .......... .......... .......... .......... 108 ACAATTTGCA CCTTCCCAGC AAATCTCTAT GTAATATATG TTGTTGCACA AAAGCTGTAC 73170 .......... .......... .......... .......... .......... .......... 108 GCAAGAGTAC AAAACAGCTT TTGAAATATT TTGGAACTCT ACTCTGTGGC GGATATAATT 73230 .......... .......... .......... .......... .......... .......... 108 TTCTGGTTCC TGCTATGAGA GTGACCAAGC TTAGTTCAGT CTTTTGAAGT CTCTTTCTTT 73290 .......... .......... .......... .......... .......... .......... 108 GCATTCTTCT TGTAGTAAAT ATTTTTGGAA CGCTTTCTTT TCGACTAGCA GTTGCAGTTT 73350 .......... .......... .......... .......... .......... .......... 108 CATGATACTT CTTTGAAACT GGTAATATGA AGATCATATT GATTAGTTTT TGTTTGTAAG 73410 .......... .......... .......... .......... .......... .......... 108 GCCCTTGATC GAGGTGCTGC ACTGCTAAAG GTAGACAAGC TCGTTACCGG ACATAATGCA 73470 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCCTTGATC GAGGTGCTGC ACTGCTAAAG GTAGACAAGC TCGTTACCGG ACATAATGCA 168 GATGATATTG CTGAAACAGT CCTTTTAAAT ATTTTACGAG GTGATATTGC AAGGTAAAAG 73530 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| GATGATATTG CTGAAACAGT CCTTTTAAAT ATTTTACGAG GTGATATTGC AAG....... 221 TAATTGTAAT TTAGTGCTCT TGTATGAGTC TCTTCCTTCT TGACTTCCCC AAATTATTGA 73590 .......... .......... .......... .......... .......... .......... 221 TCGGTTTCTT ACCGCTATCA AACCAGATTG GGTAGATGCA CGTCGATAAT TACTGGAGAA 73650 |||| |||||||||| |||||||||| |||||||||| .......... .......... ......ATTG GGTAGATGCA CGTCGATAAT TACTGGAGAA 255 GATGGGCCAA TACCGAGATG CAAGCCCTTC AAATACACTT ATGAGAAGGA AATTGTCATA 73710 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGGGCCAA TACCGAGATG CAAGCCCTTC AAATACACTT ATGAGAAGGA AATTGTCATA 315 TATCCTTTTC TTTGATAGTA TTTTATTGGG CTACCCCTAC CTATATACTT CAAATGGCTG 73770 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATCCTTTTC TTTGATAGTA TTTTATTGGG CTACCCCTAC CTATATACTT CAAATGGCTG 375 CATCTTCCCT AGTAAAATCA TTGCTTTGTG ATTGTGATCA CTTATGACTA TGCTGCCTTA 73830 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| CATCTTCCCT AGTAAAATCA TTGCTTTGCG ATTGTGATCA CTTATGACTA TGCTGCCTTA 435 ACTTGCTGTT ACGTATGCAT ACTTTAAAAA GCTGGACTAC 73870 |||||||||| |||||||||| |||||||||| |||||||||| ACTTGCTGTT ACGTATGCAT ACTTTAAAAA GCTGGACTAC 475 hqPGS_C08HBa0336I24.1+_SGN-E317641+ (72931 73038,73411 73523,73617 73870) ******************************************************************************** EST sequence 44 +strand 602 n (File: SGN-E548973+) 1 GCCAATACCG AGATGCAAGC CCTTCAAATA CACTTATGAG AAGGAAATTG TCATGTATGC 61 ATACTTTAAA AAGCTGGACT ACTTCTCTAC AGAATGTATT TATTCCCCCA ATGCGTATCG 121 TGGCTTTGCT CGTGAGTTCA TTAAACATTT AGAAAGGATG AGACCAAGAG CCATTCTTGA 181 CATTATCAAA TCAGGTGAAG ACTTTCGGAT CTCCACCTCT ACAAAAATGC CAGAACAAGG 241 CACTTGTGAA AGATGTGGTT ACATATCCAG CCAGAAATGG TGCAAAGCAT GTGTCTTGCT 301 TGAGGGCCTC AATCGTGGTT TACCCAAATT AGGCATTGGG CGGAGTCGGG GGATTAATAG 361 CGAACATAAT GCAAATACGA AACAAGCTAA TGGAACACAA AGTTTACAAA GCAAACAGTG 421 TGGAAGTTTG GACTTCTGAA TCCTCATGTA GCTGCATAAA TCAGTGTTTT AATTACAACA 481 TACATACCTA TCCAGTGAGA AAGGCTTTAA CTAGAAATTC CATATTATCT GTGTAGCTTT 541 ATGTATTTAT GGAGGTGGAA ACTAGCCTCC TAGTTTATCC TGCGATTATT CTAAAAAAAA 601 AA Predicted gene structure (within gDNA segment 73056 to 76758): Exon 1 73656 73709 ( 54 n); cDNA 1 54 ( 54 n); score: 1.000 Intron 1 73710 73842 ( 133 n); Pd: 0.990 (s: 1.00), Pa: 0.000 (s: 1.00) Exon 2 73843 73883 ( 41 n); cDNA 55 95 ( 41 n); score: 1.000 Intron 2 73884 75062 (1179 n); Pd: 0.989 (s: 1.00), Pa: 0.991 (s: 1.00) Exon 3 75063 75129 ( 67 n); cDNA 96 162 ( 67 n); score: 1.000 Intron 3 75130 75239 ( 110 n); Pd: 0.982 (s: 1.00), Pa: 0.671 (s: 1.00) Exon 4 75240 75351 ( 112 n); cDNA 163 274 ( 112 n); score: 1.000 Intron 4 75352 75739 ( 388 n); Pd: 0.998 (s: 1.00), Pa: 0.985 (s: 1.00) Exon 5 75740 76057 ( 318 n); cDNA 275 592 ( 318 n); score: 1.000 PPA cDNA 593 602 MATCH C08HBa0336I24.1+ SGN-E548973+ 1.000 592 0.983 C PGS_C08HBa0336I24.1+_SGN-E548973+ (73656 73709,73843 73883,75063 75129,75240 75351,75740 76057) Alignment (genomic DNA sequence = upper lines): GCCAATACCG AGATGCAAGC CCTTCAAATA CACTTATGAG AAGGAAATTG TCATATATCC 73715 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| GCCAATACCG AGATGCAAGC CCTTCAAATA CACTTATGAG AAGGAAATTG TCAT...... 54 TTTTCTTTGA TAGTATTTTA TTGGGCTACC CCTACCTATA TACTTCAAAT GGCTGCATCT 73775 .......... .......... .......... .......... .......... .......... 54 TCCCTAGTAA AATCATTGCT TTGTGATTGT GATCACTTAT GACTATGCTG CCTTAACTTG 73835 .......... .......... .......... .......... .......... .......... 54 CTGTTACGTA TGCATACTTT AAAAAGCTGG ACTACTTCTC TACAGAATGT AAGTTTGTTT 73895 ||| |||||||||| |||||||||| |||||||||| |||||||| .......GTA TGCATACTTT AAAAAGCTGG ACTACTTCTC TACAGAAT.. .......... 95 TCTTTCCTTC AACTTTCAGT TCTAATCCTA GAACTAGGAT TTCTGTTCTT CTTTATTTGC 73955 .......... .......... .......... .......... .......... .......... 95 TGTTAGTATA TTTACATTCT CTTTGTTGAG ACACTTCGAT GTGTGTTGTG TTCACCTGTC 74015 .......... .......... .......... .......... .......... .......... 95 CACTTTAATC TCTCTCTCTT TCCTCCCATT ACACTGGAAA GAGGCCCAGG TTTTGTGGAA 74075 .......... .......... .......... .......... .......... .......... 95 GAGGTGGGGT ATGAGATAAT ATGAACGTGT TAAAATTGCT ACATCTTAGA ACAGTTGATA 74135 .......... .......... .......... .......... .......... .......... 95 AAATTTCCTC TCGGTATCTG AAAGGAAATA ATATTTCAAT TCAATGTAGA AGGCTGGGTG 74195 .......... .......... .......... .......... .......... .......... 95 GAGAAATTAT CTAGAATTCA TGAACAAGAA CCTCAAATCC GATTCTATTT GTATACATCA 74255 .......... .......... .......... .......... .......... .......... 95 GAAAATAGAT CAGGAATGAA AGAGAAACTA AATTGTCAGC TTCATGTGCC ATATTGATCC 74315 .......... .......... .......... .......... .......... .......... 95 AAGTATTGTA CTTTTCAAGA GAATAACCCC CAAAAGCAAA GGTTTCTTGC TGACTTATGG 74375 .......... .......... .......... .......... .......... .......... 95 CTAATCATCT GTTCATTCTA TATGTCTTTT TTGAACATAA TGATAGTCAT TTAACATATA 74435 .......... .......... .......... .......... .......... .......... 95 CTGTCTACGT TACCAAAAAG TCGACTTCTT TCTTAATAAT GATAAACATT TTCCCAAAGA 74495 .......... .......... .......... .......... .......... .......... 95 TCCAACAATA TAGACCTATA CTACCTTGTA TTGTTTCATG ATCGATGTGA TATTTTTCAA 74555 .......... .......... .......... .......... .......... .......... 95 CTAACAGTTC CACCTCTTTG AACTACTACT TAGAGCTTTT CTTATCAATC TCAGTACTAA 74615 .......... .......... .......... .......... .......... .......... 95 ATTAATAATA TATCCAACTA TCTTACTCTT AAGCTTTGCG AGTGCTAACC TAATCAATTA 74675 .......... .......... .......... .......... .......... .......... 95 GAATGGGACA GAGAAAGTAG TAATTTGAGT GTTCTAGTCT GCAAGTGCCT CCATTGTGCA 74735 .......... .......... .......... .......... .......... .......... 95 TCATTCTTGC ACTTAAACAA CATGACATGA TCACCTATCA CTATCAGTAT GACTTCCCAA 74795 .......... .......... .......... .......... .......... .......... 95 ATATAGTTTT TTGTATGACT ACCATATAAA CATATAATGT CTATTTTATA TCTAATATAT 74855 .......... .......... .......... .......... .......... .......... 95 TTTTTTTAGT GATGAAGTTA AATATTTGAA ATTTTACTAA TGCCAGGCCT TCGCCCATCT 74915 .......... .......... .......... .......... .......... .......... 95 ATCTATTAAG GTTTTACTTT TCATTCCTGG TTGTGGAACA TTTCTTTTAT ATAGATATTC 74975 .......... .......... .......... .......... .......... .......... 95 TGAAGGTCTG AGCACTCAAT GTCCTTTGGC TTTGTGTCAT ATCCTTGTGT TTCATCCTAA 75035 .......... .......... .......... .......... .......... .......... 95 AAAGTTAGAT GTGTTATGAA CATGCAGGTA TTTATTCCCC CAATGCGTAT CGTGGCTTTG 75095 ||| |||||||||| |||||||||| |||||||||| .......... .......... .......GTA TTTATTCCCC CAATGCGTAT CGTGGCTTTG 128 CTCGTGAGTT CATTAAACAT TTAGAAAGGA TGAGGTACAT CCCAGTTGAA ATTCTTCCTA 75155 |||||||||| |||||||||| |||||||||| |||| CTCGTGAGTT CATTAAACAT TTAGAAAGGA TGAG...... .......... .......... 162 AAAAATAATT CTTCAGATTA TGTAGTATAA GTAGACTTTG CAAATTACTT TTGTTCCTCA 75215 .......... .......... .......... .......... .......... .......... 162 ATAAAATACT AATTTACATG ACAGACCAAG AGCCATTCTT GACATTATCA AATCAGGTGA 75275 |||||| |||||||||| |||||||||| |||||||||| .......... .......... ....ACCAAG AGCCATTCTT GACATTATCA AATCAGGTGA 198 AGACTTTCGG ATCTCCACCT CTACAAAAAT GCCAGAACAA GGCACTTGTG AAAGATGTGG 75335 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGACTTTCGG ATCTCCACCT CTACAAAAAT GCCAGAACAA GGCACTTGTG AAAGATGTGG 258 TTACATATCC AGCCAGGTAA ATATGATAAT TTTCTACTGC TTTGCAGTTT ACAATACTAG 75395 |||||||||| |||||| TTACATATCC AGCCAG.... .......... .......... .......... .......... 274 ACTTCTAGCA TCTATATGTT AAAGTATAAT TTGTTCAAGG GATCAGTATG CTTTCCCTTT 75455 .......... .......... .......... .......... .......... .......... 274 ACTGGTTATT ACTTCCTCAA GATGTTAATG TTGTCATTGT ATTATGATCT ATCTGTCTCC 75515 .......... .......... .......... .......... .......... .......... 274 TTTGCAATAT CTACTCGACT GGTTAAAGTT TCTCCTGAAG AATTGTTGAT CCGTGTTGAG 75575 .......... .......... .......... .......... .......... .......... 274 ATATAGACCC TACTATCGTC ACTCTCATAT GACAGTTTTC TTTCGTGATT AACTCTCTTA 75635 .......... .......... .......... .......... .......... .......... 274 GCTTTATCAA CTTGCAAAAG TTTGTTCGTA CTACTAAATT ATTCTTGTAC AAAATAGGCT 75695 .......... .......... .......... .......... .......... .......... 274 ACTTGTTGAA CTGACTGGTC CATATATTGT GTAACTATAT GCAGAAATGG TGCAAAGCAT 75755 |||||| |||||||||| .......... .......... .......... .......... ....AAATGG TGCAAAGCAT 290 GTGTCTTGCT TGAGGGCCTC AATCGTGGTT TACCCAAATT AGGCATTGGG CGGAGTCGGG 75815 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGTCTTGCT TGAGGGCCTC AATCGTGGTT TACCCAAATT AGGCATTGGG CGGAGTCGGG 350 GGATTAATAG CGAACATAAT GCAAATACGA AACAAGCTAA TGGAACACAA AGTTTACAAA 75875 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGATTAATAG CGAACATAAT GCAAATACGA AACAAGCTAA TGGAACACAA AGTTTACAAA 410 GCAAACAGTG TGGAAGTTTG GACTTCTGAA TCCTCATGTA GCTGCATAAA TCAGTGTTTT 75935 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAAACAGTG TGGAAGTTTG GACTTCTGAA TCCTCATGTA GCTGCATAAA TCAGTGTTTT 470 AATTACAACA TACATACCTA TCCAGTGAGA AAGGCTTTAA CTAGAAATTC CATATTATCT 75995 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTACAACA TACATACCTA TCCAGTGAGA AAGGCTTTAA CTAGAAATTC CATATTATCT 530 GTGTAGCTTT ATGTATTTAT GGAGGTGGAA ACTAGCCTCC TAGTTTATCC TGCGATTATT 76055 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGTAGCTTT ATGTATTTAT GGAGGTGGAA ACTAGCCTCC TAGTTTATCC TGCGATTATT 590 CT 76057 || CT 592 hqPGS_C08HBa0336I24.1+_SGN-E548973+ (73656 73709,73843 73883,75063 75129,75240 75351,75740 76057) ******************************************************************************** EST sequence 299 -strand 603 n (File: SGN-E544016-) 1 GCCAATACCG AGATGCAAGC CCTTCAAATA CACTTATGAG AAGGAAATTG TCATGTATGC 61 ATACTTTAAA AAGCTGGACT ACTTCTCTAC AGAATGTATT TATTCCCCCA ATGCGTATCG 121 TGGCTTTGCT CGTGAGTTCA TTAAACATTT AGAAAGGATG AGACCAAGAG CCATTCTTGA 181 CATTATCAAA TCAGGTGAAG ACTTTCGGAT CTCCACCTCT ACAAAAATGC CAGAACAAGG 241 CACTTGTGAA AGATGTGGTT ACATATCCAG CCAGAAATGG TGCAAAGCAT GTGTCTTGCT 301 TGAGGGCCTC AATCGTGGTT TACCCAAATT AGGCATTGGG CGGAGTCGGG GGATTAATAG 361 CGAACATAAT GCAAATACGA AACAAGCTAA TGGAACACAA AGTTTACAAA GCAAACAGTG 421 TGGAAGTTTG GACTTCTGAA TCCTCATGTA GCTGCATAAA TCAGTGTTTT AATTACAACA 481 TACATACCTA TCCAGTGAGA AAGGCTTTAA CTAGAAATTC CATATTATCT GTGTAGCTTT 541 ATGTATTTAT GGAGGTGGAA ACTAGCCTCC TTAGTTTATC CTGCGATTAT TCTAAAAAAA 601 AAA Predicted gene structure (within gDNA segment 73046 to 76748): Exon 1 73656 73709 ( 54 n); cDNA 1 54 ( 54 n); score: 1.000 Intron 1 73710 73842 ( 133 n); Pd: 0.990 (s: 1.00), Pa: 0.000 (s: 1.00) Exon 2 73843 73883 ( 41 n); cDNA 55 95 ( 41 n); score: 1.000 Intron 2 73884 75062 (1179 n); Pd: 0.989 (s: 1.00), Pa: 0.991 (s: 1.00) Exon 3 75063 75129 ( 67 n); cDNA 96 162 ( 67 n); score: 1.000 Intron 3 75130 75239 ( 110 n); Pd: 0.982 (s: 1.00), Pa: 0.671 (s: 1.00) Exon 4 75240 75351 ( 112 n); cDNA 163 274 ( 112 n); score: 1.000 Intron 4 75352 75739 ( 388 n); Pd: 0.998 (s: 1.00), Pa: 0.985 (s: 1.00) Exon 5 75740 76057 ( 318 n); cDNA 275 593 ( 319 n); score: 0.992 PPA cDNA 594 603 MATCH C08HBa0336I24.1+ SGN-E544016- 0.995 592 0.982 C PGS_C08HBa0336I24.1+_SGN-E544016- (73656 73709,73843 73883,75063 75129,75240 75351,75740 76057) Alignment (genomic DNA sequence = upper lines): GCCAATACCG AGATGCAAGC CCTTCAAATA CACTTATGAG AAGGAAATTG TCATATATCC 73715 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| GCCAATACCG AGATGCAAGC CCTTCAAATA CACTTATGAG AAGGAAATTG TCAT...... 54 TTTTCTTTGA TAGTATTTTA TTGGGCTACC CCTACCTATA TACTTCAAAT GGCTGCATCT 73775 .......... .......... .......... .......... .......... .......... 54 TCCCTAGTAA AATCATTGCT TTGTGATTGT GATCACTTAT GACTATGCTG CCTTAACTTG 73835 .......... .......... .......... .......... .......... .......... 54 CTGTTACGTA TGCATACTTT AAAAAGCTGG ACTACTTCTC TACAGAATGT AAGTTTGTTT 73895 ||| |||||||||| |||||||||| |||||||||| |||||||| .......GTA TGCATACTTT AAAAAGCTGG ACTACTTCTC TACAGAAT.. .......... 95 TCTTTCCTTC AACTTTCAGT TCTAATCCTA GAACTAGGAT TTCTGTTCTT CTTTATTTGC 73955 .......... .......... .......... .......... .......... .......... 95 TGTTAGTATA TTTACATTCT CTTTGTTGAG ACACTTCGAT GTGTGTTGTG TTCACCTGTC 74015 .......... .......... .......... .......... .......... .......... 95 CACTTTAATC TCTCTCTCTT TCCTCCCATT ACACTGGAAA GAGGCCCAGG TTTTGTGGAA 74075 .......... .......... .......... .......... .......... .......... 95 GAGGTGGGGT ATGAGATAAT ATGAACGTGT TAAAATTGCT ACATCTTAGA ACAGTTGATA 74135 .......... .......... .......... .......... .......... .......... 95 AAATTTCCTC TCGGTATCTG AAAGGAAATA ATATTTCAAT TCAATGTAGA AGGCTGGGTG 74195 .......... .......... .......... .......... .......... .......... 95 GAGAAATTAT CTAGAATTCA TGAACAAGAA CCTCAAATCC GATTCTATTT GTATACATCA 74255 .......... .......... .......... .......... .......... .......... 95 GAAAATAGAT CAGGAATGAA AGAGAAACTA AATTGTCAGC TTCATGTGCC ATATTGATCC 74315 .......... .......... .......... .......... .......... .......... 95 AAGTATTGTA CTTTTCAAGA GAATAACCCC CAAAAGCAAA GGTTTCTTGC TGACTTATGG 74375 .......... .......... .......... .......... .......... .......... 95 CTAATCATCT GTTCATTCTA TATGTCTTTT TTGAACATAA TGATAGTCAT TTAACATATA 74435 .......... .......... .......... .......... .......... .......... 95 CTGTCTACGT TACCAAAAAG TCGACTTCTT TCTTAATAAT GATAAACATT TTCCCAAAGA 74495 .......... .......... .......... .......... .......... .......... 95 TCCAACAATA TAGACCTATA CTACCTTGTA TTGTTTCATG ATCGATGTGA TATTTTTCAA 74555 .......... .......... .......... .......... .......... .......... 95 CTAACAGTTC CACCTCTTTG AACTACTACT TAGAGCTTTT CTTATCAATC TCAGTACTAA 74615 .......... .......... .......... .......... .......... .......... 95 ATTAATAATA TATCCAACTA TCTTACTCTT AAGCTTTGCG AGTGCTAACC TAATCAATTA 74675 .......... .......... .......... .......... .......... .......... 95 GAATGGGACA GAGAAAGTAG TAATTTGAGT GTTCTAGTCT GCAAGTGCCT CCATTGTGCA 74735 .......... .......... .......... .......... .......... .......... 95 TCATTCTTGC ACTTAAACAA CATGACATGA TCACCTATCA CTATCAGTAT GACTTCCCAA 74795 .......... .......... .......... .......... .......... .......... 95 ATATAGTTTT TTGTATGACT ACCATATAAA CATATAATGT CTATTTTATA TCTAATATAT 74855 .......... .......... .......... .......... .......... .......... 95 TTTTTTTAGT GATGAAGTTA AATATTTGAA ATTTTACTAA TGCCAGGCCT TCGCCCATCT 74915 .......... .......... .......... .......... .......... .......... 95 ATCTATTAAG GTTTTACTTT TCATTCCTGG TTGTGGAACA TTTCTTTTAT ATAGATATTC 74975 .......... .......... .......... .......... .......... .......... 95 TGAAGGTCTG AGCACTCAAT GTCCTTTGGC TTTGTGTCAT ATCCTTGTGT TTCATCCTAA 75035 .......... .......... .......... .......... .......... .......... 95 AAAGTTAGAT GTGTTATGAA CATGCAGGTA TTTATTCCCC CAATGCGTAT CGTGGCTTTG 75095 ||| |||||||||| |||||||||| |||||||||| .......... .......... .......GTA TTTATTCCCC CAATGCGTAT CGTGGCTTTG 128 CTCGTGAGTT CATTAAACAT TTAGAAAGGA TGAGGTACAT CCCAGTTGAA ATTCTTCCTA 75155 |||||||||| |||||||||| |||||||||| |||| CTCGTGAGTT CATTAAACAT TTAGAAAGGA TGAG...... .......... .......... 162 AAAAATAATT CTTCAGATTA TGTAGTATAA GTAGACTTTG CAAATTACTT TTGTTCCTCA 75215 .......... .......... .......... .......... .......... .......... 162 ATAAAATACT AATTTACATG ACAGACCAAG AGCCATTCTT GACATTATCA AATCAGGTGA 75275 |||||| |||||||||| |||||||||| |||||||||| .......... .......... ....ACCAAG AGCCATTCTT GACATTATCA AATCAGGTGA 198 AGACTTTCGG ATCTCCACCT CTACAAAAAT GCCAGAACAA GGCACTTGTG AAAGATGTGG 75335 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGACTTTCGG ATCTCCACCT CTACAAAAAT GCCAGAACAA GGCACTTGTG AAAGATGTGG 258 TTACATATCC AGCCAGGTAA ATATGATAAT TTTCTACTGC TTTGCAGTTT ACAATACTAG 75395 |||||||||| |||||| TTACATATCC AGCCAG.... .......... .......... .......... .......... 274 ACTTCTAGCA TCTATATGTT AAAGTATAAT TTGTTCAAGG GATCAGTATG CTTTCCCTTT 75455 .......... .......... .......... .......... .......... .......... 274 ACTGGTTATT ACTTCCTCAA GATGTTAATG TTGTCATTGT ATTATGATCT ATCTGTCTCC 75515 .......... .......... .......... .......... .......... .......... 274 TTTGCAATAT CTACTCGACT GGTTAAAGTT TCTCCTGAAG AATTGTTGAT CCGTGTTGAG 75575 .......... .......... .......... .......... .......... .......... 274 ATATAGACCC TACTATCGTC ACTCTCATAT GACAGTTTTC TTTCGTGATT AACTCTCTTA 75635 .......... .......... .......... .......... .......... .......... 274 GCTTTATCAA CTTGCAAAAG TTTGTTCGTA CTACTAAATT ATTCTTGTAC AAAATAGGCT 75695 .......... .......... .......... .......... .......... .......... 274 ACTTGTTGAA CTGACTGGTC CATATATTGT GTAACTATAT GCAGAAATGG TGCAAAGCAT 75755 |||||| |||||||||| .......... .......... .......... .......... ....AAATGG TGCAAAGCAT 290 GTGTCTTGCT TGAGGGCCTC AATCGTGGTT TACCCAAATT AGGCATTGGG CGGAGTCGGG 75815 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGTCTTGCT TGAGGGCCTC AATCGTGGTT TACCCAAATT AGGCATTGGG CGGAGTCGGG 350 GGATTAATAG CGAACATAAT GCAAATACGA AACAAGCTAA TGGAACACAA AGTTTACAAA 75875 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGATTAATAG CGAACATAAT GCAAATACGA AACAAGCTAA TGGAACACAA AGTTTACAAA 410 GCAAACAGTG TGGAAGTTTG GACTTCTGAA TCCTCATGTA GCTGCATAAA TCAGTGTTTT 75935 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAAACAGTG TGGAAGTTTG GACTTCTGAA TCCTCATGTA GCTGCATAAA TCAGTGTTTT 470 AATTACAACA TACATACCTA TCCAGTGAGA AAGGCTTTAA CTAGAAATTC CATATTATCT 75995 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTACAACA TACATACCTA TCCAGTGAGA AAGGCTTTAA CTAGAAATTC CATATTATCT 530 GTGTAGCTTT ATGTATTTAT GGAGGTGGAA ACTAGCCTCC -TAGTTTATC CTGCGATTAT 76054 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| GTGTAGCTTT ATGTATTTAT GGAGGTGGAA ACTAGCCTCC TTAGTTTATC CTGCGATTAT 590 TCT 76057 ||| TCT 593 hqPGS_C08HBa0336I24.1+_SGN-E544016- (73656 73709,73843 73883,75063 75129,75240 75351,75740 76057) ******************************************************************************** EST sequence 37 +strand 529 n (File: SGN-E302716+) 1 CCAATACCGA GATGCAAGCC CTTCAAATAC ACTTATGAGA AGGAAATTGT CATGTATGCA 61 TACTTTAAAA AGCTGGACTA CTTCTCTACA GAATGTATTT ATTCCCCCAA TGCGTATCGT 121 GGCTTTGCTC GTGAGTTCAT TAAACATTTA GAAAGGATGA GACCAAGAGC CATTCTTGAC 181 ATTATCAAAT CAGGTGAAGA CTTTCGGATC TCCACCTCTA CAAAAATGCC ACAACAAGGC 241 ACTTGTGAAA GATGTGGTTA CATATCCAGC CAGAAATGGG GCACAGCATG TGTCTTGCTT 301 GACGGCCTCA ATCGAGGTTT ACCCAAATTA GGCATTGGGC GGAGTCGGGG GATTAATAGC 361 GAACATAATG CAAATACGAA ACAAGCTAAT GGAACACAAA GTTTACAAAG CAAACAGTGT 421 GGAAGTTTGG ACTTCTGAAT CCTCATGTAG CTGCATAAAT CAGTGTTTTA ATTACAACAT 481 ACATACCTAT CCAGTGAGAA AGGCTTTAAC TAGAAATTCC ATATTATCT Predicted gene structure (within gDNA segment 73057 to 76605): Exon 1 73657 73709 ( 53 n); cDNA 1 53 ( 53 n); score: 1.000 Intron 1 73710 73842 ( 133 n); Pd: 0.990 (s: 1.00), Pa: 0.000 (s: 1.00) Exon 2 73843 73883 ( 41 n); cDNA 54 94 ( 41 n); score: 1.000 Intron 2 73884 75062 (1179 n); Pd: 0.989 (s: 1.00), Pa: 0.991 (s: 1.00) Exon 3 75063 75129 ( 67 n); cDNA 95 161 ( 67 n); score: 1.000 Intron 3 75130 75239 ( 110 n); Pd: 0.982 (s: 1.00), Pa: 0.671 (s: 1.00) Exon 4 75240 75351 ( 112 n); cDNA 162 273 ( 112 n); score: 0.991 Intron 4 75352 75739 ( 388 n); Pd: 0.998 (s: 0.98), Pa: 0.985 (s: 0.92) Exon 5 75740 75995 ( 256 n); cDNA 274 529 ( 256 n); score: 0.984 MATCH C08HBa0336I24.1+ SGN-E302716+ 0.990 529 1.000 C PGS_C08HBa0336I24.1+_SGN-E302716+ (73657 73709,73843 73883,75063 75129,75240 75351,75740 75995) Alignment (genomic DNA sequence = upper lines): CCAATACCGA GATGCAAGCC CTTCAAATAC ACTTATGAGA AGGAAATTGT CATATATCCT 73716 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| CCAATACCGA GATGCAAGCC CTTCAAATAC ACTTATGAGA AGGAAATTGT CAT....... 53 TTTCTTTGAT AGTATTTTAT TGGGCTACCC CTACCTATAT ACTTCAAATG GCTGCATCTT 73776 .......... .......... .......... .......... .......... .......... 53 CCCTAGTAAA ATCATTGCTT TGTGATTGTG ATCACTTATG ACTATGCTGC CTTAACTTGC 73836 .......... .......... .......... .......... .......... .......... 53 TGTTACGTAT GCATACTTTA AAAAGCTGGA CTACTTCTCT ACAGAATGTA AGTTTGTTTT 73896 |||| |||||||||| |||||||||| |||||||||| ||||||| ......GTAT GCATACTTTA AAAAGCTGGA CTACTTCTCT ACAGAAT... .......... 94 CTTTCCTTCA ACTTTCAGTT CTAATCCTAG AACTAGGATT TCTGTTCTTC TTTATTTGCT 73956 .......... .......... .......... .......... .......... .......... 94 GTTAGTATAT TTACATTCTC TTTGTTGAGA CACTTCGATG TGTGTTGTGT TCACCTGTCC 74016 .......... .......... .......... .......... .......... .......... 94 ACTTTAATCT CTCTCTCTTT CCTCCCATTA CACTGGAAAG AGGCCCAGGT TTTGTGGAAG 74076 .......... .......... .......... .......... .......... .......... 94 AGGTGGGGTA TGAGATAATA TGAACGTGTT AAAATTGCTA CATCTTAGAA CAGTTGATAA 74136 .......... .......... .......... .......... .......... .......... 94 AATTTCCTCT CGGTATCTGA AAGGAAATAA TATTTCAATT CAATGTAGAA GGCTGGGTGG 74196 .......... .......... .......... .......... .......... .......... 94 AGAAATTATC TAGAATTCAT GAACAAGAAC CTCAAATCCG ATTCTATTTG TATACATCAG 74256 .......... .......... .......... .......... .......... .......... 94 AAAATAGATC AGGAATGAAA GAGAAACTAA ATTGTCAGCT TCATGTGCCA TATTGATCCA 74316 .......... .......... .......... .......... .......... .......... 94 AGTATTGTAC TTTTCAAGAG AATAACCCCC AAAAGCAAAG GTTTCTTGCT GACTTATGGC 74376 .......... .......... .......... .......... .......... .......... 94 TAATCATCTG TTCATTCTAT ATGTCTTTTT TGAACATAAT GATAGTCATT TAACATATAC 74436 .......... .......... .......... .......... .......... .......... 94 TGTCTACGTT ACCAAAAAGT CGACTTCTTT CTTAATAATG ATAAACATTT TCCCAAAGAT 74496 .......... .......... .......... .......... .......... .......... 94 CCAACAATAT AGACCTATAC TACCTTGTAT TGTTTCATGA TCGATGTGAT ATTTTTCAAC 74556 .......... .......... .......... .......... .......... .......... 94 TAACAGTTCC ACCTCTTTGA ACTACTACTT AGAGCTTTTC TTATCAATCT CAGTACTAAA 74616 .......... .......... .......... .......... .......... .......... 94 TTAATAATAT ATCCAACTAT CTTACTCTTA AGCTTTGCGA GTGCTAACCT AATCAATTAG 74676 .......... .......... .......... .......... .......... .......... 94 AATGGGACAG AGAAAGTAGT AATTTGAGTG TTCTAGTCTG CAAGTGCCTC CATTGTGCAT 74736 .......... .......... .......... .......... .......... .......... 94 CATTCTTGCA CTTAAACAAC ATGACATGAT CACCTATCAC TATCAGTATG ACTTCCCAAA 74796 .......... .......... .......... .......... .......... .......... 94 TATAGTTTTT TGTATGACTA CCATATAAAC ATATAATGTC TATTTTATAT CTAATATATT 74856 .......... .......... .......... .......... .......... .......... 94 TTTTTTAGTG ATGAAGTTAA ATATTTGAAA TTTTACTAAT GCCAGGCCTT CGCCCATCTA 74916 .......... .......... .......... .......... .......... .......... 94 TCTATTAAGG TTTTACTTTT CATTCCTGGT TGTGGAACAT TTCTTTTATA TAGATATTCT 74976 .......... .......... .......... .......... .......... .......... 94 GAAGGTCTGA GCACTCAATG TCCTTTGGCT TTGTGTCATA TCCTTGTGTT TCATCCTAAA 75036 .......... .......... .......... .......... .......... .......... 94 AAGTTAGATG TGTTATGAAC ATGCAGGTAT TTATTCCCCC AATGCGTATC GTGGCTTTGC 75096 |||| |||||||||| |||||||||| |||||||||| .......... .......... ......GTAT TTATTCCCCC AATGCGTATC GTGGCTTTGC 128 TCGTGAGTTC ATTAAACATT TAGAAAGGAT GAGGTACATC CCAGTTGAAA TTCTTCCTAA 75156 |||||||||| |||||||||| |||||||||| ||| TCGTGAGTTC ATTAAACATT TAGAAAGGAT GAG....... .......... .......... 161 AAAATAATTC TTCAGATTAT GTAGTATAAG TAGACTTTGC AAATTACTTT TGTTCCTCAA 75216 .......... .......... .......... .......... .......... .......... 161 TAAAATACTA ATTTACATGA CAGACCAAGA GCCATTCTTG ACATTATCAA ATCAGGTGAA 75276 ||||||| |||||||||| |||||||||| |||||||||| .......... .......... ...ACCAAGA GCCATTCTTG ACATTATCAA ATCAGGTGAA 198 GACTTTCGGA TCTCCACCTC TACAAAAATG CCAGAACAAG GCACTTGTGA AAGATGTGGT 75336 |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| GACTTTCGGA TCTCCACCTC TACAAAAATG CCACAACAAG GCACTTGTGA AAGATGTGGT 258 TACATATCCA GCCAGGTAAA TATGATAATT TTCTACTGCT TTGCAGTTTA CAATACTAGA 75396 |||||||||| ||||| TACATATCCA GCCAG..... .......... .......... .......... .......... 273 CTTCTAGCAT CTATATGTTA AAGTATAATT TGTTCAAGGG ATCAGTATGC TTTCCCTTTA 75456 .......... .......... .......... .......... .......... .......... 273 CTGGTTATTA CTTCCTCAAG ATGTTAATGT TGTCATTGTA TTATGATCTA TCTGTCTCCT 75516 .......... .......... .......... .......... .......... .......... 273 TTGCAATATC TACTCGACTG GTTAAAGTTT CTCCTGAAGA ATTGTTGATC CGTGTTGAGA 75576 .......... .......... .......... .......... .......... .......... 273 TATAGACCCT ACTATCGTCA CTCTCATATG ACAGTTTTCT TTCGTGATTA ACTCTCTTAG 75636 .......... .......... .......... .......... .......... .......... 273 CTTTATCAAC TTGCAAAAGT TTGTTCGTAC TACTAAATTA TTCTTGTACA AAATAGGCTA 75696 .......... .......... .......... .......... .......... .......... 273 CTTGTTGAAC TGACTGGTCC ATATATTGTG TAACTATATG CAGAAATGGT GCAAAGCATG 75756 |||||| ||| |||||| .......... .......... .......... .......... ...AAATGGG GCACAGCATG 290 TGTCTTGCTT GAGGGCCTCA ATCGTGGTTT ACCCAAATTA GGCATTGGGC GGAGTCGGGG 75816 |||||||||| || ||||||| |||| ||||| |||||||||| |||||||||| |||||||||| TGTCTTGCTT GACGGCCTCA ATCGAGGTTT ACCCAAATTA GGCATTGGGC GGAGTCGGGG 350 GATTAATAGC GAACATAATG CAAATACGAA ACAAGCTAAT GGAACACAAA GTTTACAAAG 75876 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATTAATAGC GAACATAATG CAAATACGAA ACAAGCTAAT GGAACACAAA GTTTACAAAG 410 CAAACAGTGT GGAAGTTTGG ACTTCTGAAT CCTCATGTAG CTGCATAAAT CAGTGTTTTA 75936 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAACAGTGT GGAAGTTTGG ACTTCTGAAT CCTCATGTAG CTGCATAAAT CAGTGTTTTA 470 ATTACAACAT ACATACCTAT CCAGTGAGAA AGGCTTTAAC TAGAAATTCC ATATTATCT 75995 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| ATTACAACAT ACATACCTAT CCAGTGAGAA AGGCTTTAAC TAGAAATTCC ATATTATCT 529 hqPGS_C08HBa0336I24.1+_SGN-E302716+ (73657 73709,73843 73883,75063 75129,75240 75351,75740 75995) ******************************************************************************** EST sequence 272 -strand 558 n (File: SGN-E302717-) 1 GAAATTGTCA TGTATGCATA CTTTAAAAAG CTGGACTACT TCTCTACAGA ATGTATTTAT 61 TCCCCCAATG CGTATCGTGG CTTTGCTCGT GAGTTCATTA AACATTTAGA AAGGATGAGA 121 CCAAGAGCCA TTCTTGACAT TATCAAATCA GGTGAAGACT TTCGGATCTC CACCTCTACA 181 AAAATGCCAG AACAAGGCAC TTGTGAAAGA TGTGGTTACA TATCCAGCCA GAAATGGTGC 241 AAAGCATGTG TCTTGCTTGA GGGCCTCAAT CGTGGTTTAC CCAAATTAGG CATTGGGCGG 301 AGTCGGGGGA TTAATAGCGA ACATAATGCA AATACGAAAC AAGCTAATGG AACACAAAGT 361 TTACAAAGCA AACAGTGTGG AAGTTTGGAC TTCTGAATCC TCATGTAGCT GCATAAATCA 421 GTGTTTTAAT TACAACATAC ATACCTATCC AGTGAGAAAG GCTTTAACTA GAAATTCCAT 481 ATTATCTGTG TAGCTTTATG TATTTATGGA GGTGGAAACT AGCCTCCTAG TTTATCCTGC 541 GATTATTCTA AAAAAAAA Predicted gene structure (within gDNA segment 73123 to 76738): Exon 1 73699 73709 ( 11 n); cDNA 1 11 ( 11 n); score: 1.000 Intron 1 73710 73842 ( 133 n); Pd: 0.990 (s: 0), Pa: 0.000 (s: 1.00) Exon 2 73843 73883 ( 41 n); cDNA 12 52 ( 41 n); score: 1.000 Intron 2 73884 75062 (1179 n); Pd: 0.989 (s: 1.00), Pa: 0.991 (s: 1.00) Exon 3 75063 75129 ( 67 n); cDNA 53 119 ( 67 n); score: 1.000 Intron 3 75130 75239 ( 110 n); Pd: 0.982 (s: 1.00), Pa: 0.671 (s: 1.00) Exon 4 75240 75351 ( 112 n); cDNA 120 231 ( 112 n); score: 1.000 Intron 4 75352 75739 ( 388 n); Pd: 0.998 (s: 1.00), Pa: 0.985 (s: 1.00) Exon 5 75740 76057 ( 318 n); cDNA 232 549 ( 318 n); score: 1.000 MATCH C08HBa0336I24.1+ SGN-E302717- 1.000 549 0.984 C PGS_C08HBa0336I24.1+_SGN-E302717- (73699 73709,73843 73883,75063 75129,75240 75351,75740 76057) Alignment (genomic DNA sequence = upper lines): GAAATTGTCA TATATCCTTT TCTTTGATAG TATTTTATTG GGCTACCCCT ACCTATATAC 73758 |||||||||| | GAAATTGTCA T......... .......... .......... .......... .......... 11 TTCAAATGGC TGCATCTTCC CTAGTAAAAT CATTGCTTTG TGATTGTGAT CACTTATGAC 73818 .......... .......... .......... .......... .......... .......... 11 TATGCTGCCT TAACTTGCTG TTACGTATGC ATACTTTAAA AAGCTGGACT ACTTCTCTAC 73878 |||||| |||||||||| |||||||||| |||||||||| .......... .......... ....GTATGC ATACTTTAAA AAGCTGGACT ACTTCTCTAC 47 AGAATGTAAG TTTGTTTTCT TTCCTTCAAC TTTCAGTTCT AATCCTAGAA CTAGGATTTC 73938 ||||| AGAAT..... .......... .......... .......... .......... .......... 52 TGTTCTTCTT TATTTGCTGT TAGTATATTT ACATTCTCTT TGTTGAGACA CTTCGATGTG 73998 .......... .......... .......... .......... .......... .......... 52 TGTTGTGTTC ACCTGTCCAC TTTAATCTCT CTCTCTTTCC TCCCATTACA CTGGAAAGAG 74058 .......... .......... .......... .......... .......... .......... 52 GCCCAGGTTT TGTGGAAGAG GTGGGGTATG AGATAATATG AACGTGTTAA AATTGCTACA 74118 .......... .......... .......... .......... .......... .......... 52 TCTTAGAACA GTTGATAAAA TTTCCTCTCG GTATCTGAAA GGAAATAATA TTTCAATTCA 74178 .......... .......... .......... .......... .......... .......... 52 ATGTAGAAGG CTGGGTGGAG AAATTATCTA GAATTCATGA ACAAGAACCT CAAATCCGAT 74238 .......... .......... .......... .......... .......... .......... 52 TCTATTTGTA TACATCAGAA AATAGATCAG GAATGAAAGA GAAACTAAAT TGTCAGCTTC 74298 .......... .......... .......... .......... .......... .......... 52 ATGTGCCATA TTGATCCAAG TATTGTACTT TTCAAGAGAA TAACCCCCAA AAGCAAAGGT 74358 .......... .......... .......... .......... .......... .......... 52 TTCTTGCTGA CTTATGGCTA ATCATCTGTT CATTCTATAT GTCTTTTTTG AACATAATGA 74418 .......... .......... .......... .......... .......... .......... 52 TAGTCATTTA ACATATACTG TCTACGTTAC CAAAAAGTCG ACTTCTTTCT TAATAATGAT 74478 .......... .......... .......... .......... .......... .......... 52 AAACATTTTC CCAAAGATCC AACAATATAG ACCTATACTA CCTTGTATTG TTTCATGATC 74538 .......... .......... .......... .......... .......... .......... 52 GATGTGATAT TTTTCAACTA ACAGTTCCAC CTCTTTGAAC TACTACTTAG AGCTTTTCTT 74598 .......... .......... .......... .......... .......... .......... 52 ATCAATCTCA GTACTAAATT AATAATATAT CCAACTATCT TACTCTTAAG CTTTGCGAGT 74658 .......... .......... .......... .......... .......... .......... 52 GCTAACCTAA TCAATTAGAA TGGGACAGAG AAAGTAGTAA TTTGAGTGTT CTAGTCTGCA 74718 .......... .......... .......... .......... .......... .......... 52 AGTGCCTCCA TTGTGCATCA TTCTTGCACT TAAACAACAT GACATGATCA CCTATCACTA 74778 .......... .......... .......... .......... .......... .......... 52 TCAGTATGAC TTCCCAAATA TAGTTTTTTG TATGACTACC ATATAAACAT ATAATGTCTA 74838 .......... .......... .......... .......... .......... .......... 52 TTTTATATCT AATATATTTT TTTTAGTGAT GAAGTTAAAT ATTTGAAATT TTACTAATGC 74898 .......... .......... .......... .......... .......... .......... 52 CAGGCCTTCG CCCATCTATC TATTAAGGTT TTACTTTTCA TTCCTGGTTG TGGAACATTT 74958 .......... .......... .......... .......... .......... .......... 52 CTTTTATATA GATATTCTGA AGGTCTGAGC ACTCAATGTC CTTTGGCTTT GTGTCATATC 75018 .......... .......... .......... .......... .......... .......... 52 CTTGTGTTTC ATCCTAAAAA GTTAGATGTG TTATGAACAT GCAGGTATTT ATTCCCCCAA 75078 |||||| |||||||||| .......... .......... .......... .......... ....GTATTT ATTCCCCCAA 68 TGCGTATCGT GGCTTTGCTC GTGAGTTCAT TAAACATTTA GAAAGGATGA GGTACATCCC 75138 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | TGCGTATCGT GGCTTTGCTC GTGAGTTCAT TAAACATTTA GAAAGGATGA G......... 119 AGTTGAAATT CTTCCTAAAA AATAATTCTT CAGATTATGT AGTATAAGTA GACTTTGCAA 75198 .......... .......... .......... .......... .......... .......... 119 ATTACTTTTG TTCCTCAATA AAATACTAAT TTACATGACA GACCAAGAGC CATTCTTGAC 75258 ||||||||| |||||||||| .......... .......... .......... .......... .ACCAAGAGC CATTCTTGAC 138 ATTATCAAAT CAGGTGAAGA CTTTCGGATC TCCACCTCTA CAAAAATGCC AGAACAAGGC 75318 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTATCAAAT CAGGTGAAGA CTTTCGGATC TCCACCTCTA CAAAAATGCC AGAACAAGGC 198 ACTTGTGAAA GATGTGGTTA CATATCCAGC CAGGTAAATA TGATAATTTT CTACTGCTTT 75378 |||||||||| |||||||||| |||||||||| ||| ACTTGTGAAA GATGTGGTTA CATATCCAGC CAG....... .......... .......... 231 GCAGTTTACA ATACTAGACT TCTAGCATCT ATATGTTAAA GTATAATTTG TTCAAGGGAT 75438 .......... .......... .......... .......... .......... .......... 231 CAGTATGCTT TCCCTTTACT GGTTATTACT TCCTCAAGAT GTTAATGTTG TCATTGTATT 75498 .......... .......... .......... .......... .......... .......... 231 ATGATCTATC TGTCTCCTTT GCAATATCTA CTCGACTGGT TAAAGTTTCT CCTGAAGAAT 75558 .......... .......... .......... .......... .......... .......... 231 TGTTGATCCG TGTTGAGATA TAGACCCTAC TATCGTCACT CTCATATGAC AGTTTTCTTT 75618 .......... .......... .......... .......... .......... .......... 231 CGTGATTAAC TCTCTTAGCT TTATCAACTT GCAAAAGTTT GTTCGTACTA CTAAATTATT 75678 .......... .......... .......... .......... .......... .......... 231 CTTGTACAAA ATAGGCTACT TGTTGAACTG ACTGGTCCAT ATATTGTGTA ACTATATGCA 75738 .......... .......... .......... .......... .......... .......... 231 GAAATGGTGC AAAGCATGTG TCTTGCTTGA GGGCCTCAAT CGTGGTTTAC CCAAATTAGG 75798 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| .AAATGGTGC AAAGCATGTG TCTTGCTTGA GGGCCTCAAT CGTGGTTTAC CCAAATTAGG 290 CATTGGGCGG AGTCGGGGGA TTAATAGCGA ACATAATGCA AATACGAAAC AAGCTAATGG 75858 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTGGGCGG AGTCGGGGGA TTAATAGCGA ACATAATGCA AATACGAAAC AAGCTAATGG 350 AACACAAAGT TTACAAAGCA AACAGTGTGG AAGTTTGGAC TTCTGAATCC TCATGTAGCT 75918 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACACAAAGT TTACAAAGCA AACAGTGTGG AAGTTTGGAC TTCTGAATCC TCATGTAGCT 410 GCATAAATCA GTGTTTTAAT TACAACATAC ATACCTATCC AGTGAGAAAG GCTTTAACTA 75978 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCATAAATCA GTGTTTTAAT TACAACATAC ATACCTATCC AGTGAGAAAG GCTTTAACTA 470 GAAATTCCAT ATTATCTGTG TAGCTTTATG TATTTATGGA GGTGGAAACT AGCCTCCTAG 76038 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAATTCCAT ATTATCTGTG TAGCTTTATG TATTTATGGA GGTGGAAACT AGCCTCCTAG 530 TTTATCCTGC GATTATTCT 76057 |||||||||| ||||||||| TTTATCCTGC GATTATTCT 549 hqPGS_C08HBa0336I24.1+_SGN-E302717- (73699 73709,73843 73883,75063 75129,75240 75351,75740 76057) ******************************************************************************** EST sequence 15 +strand 556 n (File: SGN-E338465+) 1 GAGGCTTTAA AAAGCTGGAC TACTTCTCTA CCAGAATGTA TTTATTCCCC CAATGCGTAT 61 CGTGGCTTTG CTCGTGAGTT CATTAAACAT TTAGAAAGGA TGAGACCAAG AGCCATTCTT 121 GACATTATCA AATCAGGTGA AGACTTTCGG ATCTCCACCT CTACAAAAAT GCCAGAACAA 181 GGCACTTGTG AAAGATGTGG TTACATATCC AGCCAGAAAT GGTGCAAAGC ATGTGTCTTG 241 CTTGAGGGCC TCAATCGTGG TTTACCCAAA TTAGGCATTG GGCGGAGTCG GGGGATTAAT 301 AGCGAACATA ATGCAAATAC GAAACAAGCT AATGGAACAC AAAGTTTACA AAGCAAACAG 361 TGTGGAAGTT TGGACTTCTG AATCCTCATG TAGCTGCATA AATCAGTGTT TTAATTACAA 421 CATACATACC TATCCAGTGA GAAAGGCTTT AACTAGAAAT TCCATATTAT CTGTGTAGCT 481 TTATGTATTT ATGGAGGTGG AAACTAGCCT CCTAGTTTAT CCTGCGATTA TTCTATTTTT 541 TTGCGAAAAA AAAAAA Predicted gene structure (within gDNA segment 74093 to 76779): Exon 1 75063 75129 ( 67 n); cDNA 38 104 ( 67 n); score: 1.000 Intron 1 75130 75239 ( 110 n); Pd: 0.982 (s: 1.00), Pa: 0.671 (s: 1.00) Exon 2 75240 75351 ( 112 n); cDNA 105 216 ( 112 n); score: 1.000 Intron 2 75352 75739 ( 388 n); Pd: 0.998 (s: 1.00), Pa: 0.985 (s: 1.00) Exon 3 75740 76068 ( 329 n); cDNA 217 545 ( 329 n); score: 1.000 PPA cDNA 546 556 MATCH C08HBa0336I24.1+ SGN-E338465+ 1.000 508 0.914 C PGS_C08HBa0336I24.1+_SGN-E338465+ (75063 75129,75240 75351,75740 76068) Alignment (genomic DNA sequence = upper lines): GTATTTATTC CCCCAATGCG TATCGTGGCT TTGCTCGTGA GTTCATTAAA CATTTAGAAA 75122 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTATTTATTC CCCCAATGCG TATCGTGGCT TTGCTCGTGA GTTCATTAAA CATTTAGAAA 97 GGATGAGGTA CATCCCAGTT GAAATTCTTC CTAAAAAATA ATTCTTCAGA TTATGTAGTA 75182 ||||||| GGATGAG... .......... .......... .......... .......... .......... 104 TAAGTAGACT TTGCAAATTA CTTTTGTTCC TCAATAAAAT ACTAATTTAC ATGACAGACC 75242 ||| .......... .......... .......... .......... .......... .......ACC 107 AAGAGCCATT CTTGACATTA TCAAATCAGG TGAAGACTTT CGGATCTCCA CCTCTACAAA 75302 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGAGCCATT CTTGACATTA TCAAATCAGG TGAAGACTTT CGGATCTCCA CCTCTACAAA 167 AATGCCAGAA CAAGGCACTT GTGAAAGATG TGGTTACATA TCCAGCCAGG TAAATATGAT 75362 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| AATGCCAGAA CAAGGCACTT GTGAAAGATG TGGTTACATA TCCAGCCAG. .......... 216 AATTTTCTAC TGCTTTGCAG TTTACAATAC TAGACTTCTA GCATCTATAT GTTAAAGTAT 75422 .......... .......... .......... .......... .......... .......... 216 AATTTGTTCA AGGGATCAGT ATGCTTTCCC TTTACTGGTT ATTACTTCCT CAAGATGTTA 75482 .......... .......... .......... .......... .......... .......... 216 ATGTTGTCAT TGTATTATGA TCTATCTGTC TCCTTTGCAA TATCTACTCG ACTGGTTAAA 75542 .......... .......... .......... .......... .......... .......... 216 GTTTCTCCTG AAGAATTGTT GATCCGTGTT GAGATATAGA CCCTACTATC GTCACTCTCA 75602 .......... .......... .......... .......... .......... .......... 216 TATGACAGTT TTCTTTCGTG ATTAACTCTC TTAGCTTTAT CAACTTGCAA AAGTTTGTTC 75662 .......... .......... .......... .......... .......... .......... 216 GTACTACTAA ATTATTCTTG TACAAAATAG GCTACTTGTT GAACTGACTG GTCCATATAT 75722 .......... .......... .......... .......... .......... .......... 216 TGTGTAACTA TATGCAGAAA TGGTGCAAAG CATGTGTCTT GCTTGAGGGC CTCAATCGTG 75782 ||| |||||||||| |||||||||| |||||||||| |||||||||| .......... .......AAA TGGTGCAAAG CATGTGTCTT GCTTGAGGGC CTCAATCGTG 259 GTTTACCCAA ATTAGGCATT GGGCGGAGTC GGGGGATTAA TAGCGAACAT AATGCAAATA 75842 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTACCCAA ATTAGGCATT GGGCGGAGTC GGGGGATTAA TAGCGAACAT AATGCAAATA 319 CGAAACAAGC TAATGGAACA CAAAGTTTAC AAAGCAAACA GTGTGGAAGT TTGGACTTCT 75902 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGAAACAAGC TAATGGAACA CAAAGTTTAC AAAGCAAACA GTGTGGAAGT TTGGACTTCT 379 GAATCCTCAT GTAGCTGCAT AAATCAGTGT TTTAATTACA ACATACATAC CTATCCAGTG 75962 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAATCCTCAT GTAGCTGCAT AAATCAGTGT TTTAATTACA ACATACATAC CTATCCAGTG 439 AGAAAGGCTT TAACTAGAAA TTCCATATTA TCTGTGTAGC TTTATGTATT TATGGAGGTG 76022 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAAGGCTT TAACTAGAAA TTCCATATTA TCTGTGTAGC TTTATGTATT TATGGAGGTG 499 GAAACTAGCC TCCTAGTTTA TCCTGCGATT ATTCTATTTT TTTGCG 76068 |||||||||| |||||||||| |||||||||| |||||||||| |||||| GAAACTAGCC TCCTAGTTTA TCCTGCGATT ATTCTATTTT TTTGCG 545 hqPGS_C08HBa0336I24.1+_SGN-E338465+ (75063 75129,75240 75351,75740 76068) ******************************************************************************** EST sequence 6 +strand 648 n (File: SGN-E314796+) 1 TTCAATTCAA TGTAGAAGGC TGGGTGGAGA AATTATCTAG AATTCATGAA CAAGAACCTC 61 AAATCCGATT CTATTTGTAT ACATCAGAAA ATAGATCAGG AATGAAAGAG AAACTAAATT 121 GTCAGCTTCA TGTGCCATAT TGATCCAAGT ATTGTACTTT TCAAGAGAAT AACCCCCAAA 181 AGCAAAGGTT TCTTGCTGAC TTATGGCTAA TCATCTGTTC ATTCTATATG TCTTTTTTGA 241 ACATAATGAT AGTCATTTAA CATATACTGT CTACGTTACC AAAAAGTCGA CTTCTTTCTT 301 AATAATGATA AACATTTTCC CAAAGATCCA ACAATATAGA CCTATACTAC CTTGTATTGT 361 TTCATGATCG ATGTGATATT TTTCAACTAA CAGTTCCACC TCTTTGAACT ACTACTTAGA 421 GCTTTTCTTA TCAATCTCAG TACTAAATTA ATAATATATC CAACTATCTT ACTCTTAAGC 481 TTTGCGAGTG CTAACCTNAA TCATTAGAAT GGGACAGAGA AAGTAGTAAT TTGAGTGTTC 541 TAGTCTGCAA GTGCCCTCAT TGTGCATCAT TCTTGCACTT NAACACATGA CATGATCACC 601 TATCACTATC AGTATGACTT CCCAAATATA GTTTTTTGTA TGACTACC Predicted gene structure (within gDNA segment 73570 to 75428): Exon 1 74170 74818 ( 649 n); cDNA 1 648 ( 648 n); score: 0.988 MATCH C08HBa0336I24.1+ SGN-E314796+ 0.988 649 1.002 C PGS_C08HBa0336I24.1+_SGN-E314796+ (74170 74818) Alignment (genomic DNA sequence = upper lines): TTCAATTCAA TGTAGAAGGC TGGGTGGAGA AATTATCTAG AATTCATGAA CAAGAACCTC 74229 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCAATTCAA TGTAGAAGGC TGGGTGGAGA AATTATCTAG AATTCATGAA CAAGAACCTC 60 AAATCCGATT CTATTTGTAT ACATCAGAAA ATAGATCAGG AATGAAAGAG AAACTAAATT 74289 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATCCGATT CTATTTGTAT ACATCAGAAA ATAGATCAGG AATGAAAGAG AAACTAAATT 120 GTCAGCTTCA TGTGCCATAT TGATCCAAGT ATTGTACTTT TCAAGAGAAT AACCCCCAAA 74349 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCAGCTTCA TGTGCCATAT TGATCCAAGT ATTGTACTTT TCAAGAGAAT AACCCCCAAA 180 AGCAAAGGTT TCTTGCTGAC TTATGGCTAA TCATCTGTTC ATTCTATATG TCTTTTTTGA 74409 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCAAAGGTT TCTTGCTGAC TTATGGCTAA TCATCTGTTC ATTCTATATG TCTTTTTTGA 240 ACATAATGAT AGTCATTTAA CATATACTGT CTACGTTACC AAAAAGTCGA CTTCTTTCTT 74469 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATAATGAT AGTCATTTAA CATATACTGT CTACGTTACC AAAAAGTCGA CTTCTTTCTT 300 AATAATGATA AACATTTTCC CAAAGATCCA ACAATATAGA CCTATACTAC CTTGTATTGT 74529 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATAATGATA AACATTTTCC CAAAGATCCA ACAATATAGA CCTATACTAC CTTGTATTGT 360 TTCATGATCG ATGTGATATT TTTCAACTAA CAGTTCCACC TCTTTGAACT ACTACTTAGA 74589 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCATGATCG ATGTGATATT TTTCAACTAA CAGTTCCACC TCTTTGAACT ACTACTTAGA 420 GCTTTTCTTA TCAATCTCAG TACTAAATTA ATAATATATC CAACTATCTT ACTCTTAAGC 74649 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTTTTCTTA TCAATCTCAG TACTAAATTA ATAATATATC CAACTATCTT ACTCTTAAGC 480 TTTGCGAGTG CTAACCTAAT CAATTAGAAT GGGACAGAGA AAGTAGTAAT TTGAGTGTTC 74709 |||||||||| ||||||| | |||||||| |||||||||| |||||||||| |||||||||| TTTGCGAGTG CTAACCTNAA TCATTAGAAT GGGACAGAGA AAGTAGTAAT TTGAGTGTTC 540 TAGTCTGCAA GTGCCTCCAT TGTGCATCAT TCTTGCACTT AAACAACATG ACATGATCAC 74769 |||||||||| ||||| ||| |||||||||| |||||||||| ||| ||||| |||||||||| TAGTCTGCAA GTGCCCTCAT TGTGCATCAT TCTTGCACTT NAAC-ACATG ACATGATCAC 599 CTATCACTAT CAGTATGACT TCCCAAATAT AGTTTTTTGT ATGACTACC 74818 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| CTATCACTAT CAGTATGACT TCCCAAATAT AGTTTTTTGT ATGACTACC 648 hqPGS_C08HBa0336I24.1+_SGN-E314796+ (74170 74818) ******************************************************************************** EST sequence 4 -strand 280 n (File: SGN-E314094-) 1 AAAGCAGTTT TCTCCGACGG AGTTTGTACT GTAGAAACAC TACTTGCTGC ACAAATCTTT 61 GTCGATAAAG ATCGATTTTT TCTAACTGTA TTCAACAGTT TTCTTCTGTT TCTGTACTCA 121 ATTGATAATG GGGTTATTGA AGAATACAAA CAACTAGTAC AAATTCCCTC CATTTTCTCA 181 AATCAAGAAG AAGAAACAGT GAAAATTGAA GAGTGGATTT GGGATTTTTA CATATAAAAA 241 AAATGGATTA AGAAGAAACT TTGATTGAAA TTCCAAAGTG Predicted gene structure (within gDNA segment 84093 to 82604): Exon 1 83483 83204 ( 280 n); cDNA 1 280 ( 280 n); score: 0.996 MATCH C08HBa0336I24.1- SGN-E314094- 0.996 280 1.000 C PGS_C08HBa0336I24.1-_SGN-E314094- (83483 83204) Alignment (genomic DNA sequence = upper lines): AAAGCAGTTT TCTCCGACGG AGTTTGTACT GTAGAAACAC TACTTGCTGC ACAAATCCTT 83424 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || AAAGCAGTTT TCTCCGACGG AGTTTGTACT GTAGAAACAC TACTTGCTGC ACAAATCTTT 60 GTCGATAAAG ATCGATTTTT TCTAACTGTA TTCAACAGTT TTCTTCTGTT TCTGTACTCA 83364 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCGATAAAG ATCGATTTTT TCTAACTGTA TTCAACAGTT TTCTTCTGTT TCTGTACTCA 120 ATTGATAATG GGGTTATTGA AGAATACAAA CAACTAGTAC AAATTCCCTC CATTTTCTCA 83304 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGATAATG GGGTTATTGA AGAATACAAA CAACTAGTAC AAATTCCCTC CATTTTCTCA 180 AATCAAGAAG AAGAAACAGT GAAAATTGAA GAGTGGATTT GGGATTTTTA CATATAAAAA 83244 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATCAAGAAG AAGAAACAGT GAAAATTGAA GAGTGGATTT GGGATTTTTA CATATAAAAA 240 AAATGGATTA AGAAGAAACT TTGATTGAAA TTCCAAAGTG 83204 |||||||||| |||||||||| |||||||||| |||||||||| AAATGGATTA AGAAGAAACT TTGATTGAAA TTCCAAAGTG 280 hqPGS_C08HBa0336I24.1-_SGN-E314094- (83483 83204) ******************************************************************************** EST sequence 55 +strand 574 n (File: SGN-E369703+) 1 TCGTGCCGCT TTACTGGACT ACACTGGTGT ATGATTATTT GGTGGGTCGT GACGAAGAAG 61 TTGTTCCTTT CCGTGCTCGG CAGCTGAGGA AGCTTTTGTG TGATTTGGGA CCTTCTTTCA 121 TCAAAGCAGG ACAGGTACTT GCGAACAGGC CTGATATCAT CAGAGAAGAT TACATGAATG 181 AACTTTGCAT TCTTCAAGAT GATGTTCCTG CCTTTCCTAA TCAGGTTGCT TTTAACATCA 241 TAGAAGAGGA ATTGGGCCAG CCTCTTGAAG CTGTTTTCAG CAAAATTTCT TCAGAAACTA 301 TTGCAGCTGC AAGTTTGGGT CAAGTATACC GAGCTACTTT ACGTGCTTCA GGGGAAGAAG 361 TTGCCATAAA GGTGCTAAGG CCGCAAATAG AGCCTATCAT CTACAGAGAT CTTTTTCTCT 421 TCCGCACTCT AGCTTCCTTC TTGAATGGCA TCAGTCTACA GAAACTGGGG TGTAATGCTG 481 AGCTTATAGT TGATGAATTT GGTGAGAAGC TATTGGAGGA GTTGGATTAT ACCTTTGGAA 541 AGCTCGTAAT ATCGAAAACT TCTTGGAAAA TTTA Predicted gene structure (within gDNA segment 83458 to 88404): Exon 1 84124 84254 ( 131 n); cDNA 4 134 ( 131 n); score: 0.985 Intron 1 84255 86682 (2428 n); Pd: 0.993 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 86683 86772 ( 90 n); cDNA 135 224 ( 90 n); score: 1.000 Intron 2 86773 86863 ( 91 n); Pd: 0.974 (s: 1.00), Pa: 0.996 (s: 1.00) Exon 3 86864 87010 ( 147 n); cDNA 225 371 ( 147 n); score: 1.000 Intron 3 87011 87472 ( 462 n); Pd: 0.914 (s: 1.00), Pa: 0.991 (s: 1.00) Exon 4 87473 87640 ( 168 n); cDNA 372 539 ( 168 n); score: 0.988 Intron 4 87641 87749 ( 109 n); Pd: 0.000 (s: 0.96), Pa: 0.999 (s: 0) Exon 5 87750 87784 ( 35 n); cDNA 540 573 ( 34 n); score: 0.943 MATCH C08HBa0336I24.1+ SGN-E369703+ 0.993 571 0.995 C PGS_C08HBa0336I24.1+_SGN-E369703+ (84124 84254,86683 86772,86864 87010,87473 87640,87750 87784) Alignment (genomic DNA sequence = upper lines): TGGGGCTTTA CTGGACTACA CTGGTGTATG ATTATTTGGT GGGTCGTGAC GAAGAAGTTG 84183 || |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCCGCTTTA CTGGACTACA CTGGTGTATG ATTATTTGGT GGGTCGTGAC GAAGAAGTTG 63 TTCCTTTCCG TGCTCGGCAG CTGAGGAAGC TTTTGTGTGA TTTGGGACCT TCTTTCATCA 84243 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCTTTCCG TGCTCGGCAG CTGAGGAAGC TTTTGTGTGA TTTGGGACCT TCTTTCATCA 123 AAGCAGGACA GGTTTGGTGT TTTTAAATTT CTAAAGTTCA TGAACAATTG GTTGTTATAT 84303 |||||||||| | AAGCAGGACA G......... .......... .......... .......... .......... 134 TTTTCGTGAA TGAGTATTGC TCTACTTGGA AATTTTAGAC TTCAGAATCT TAAACTGGAA 84363 .......... .......... .......... .......... .......... .......... 134 AATGATTCTG TATTGGCTGT GTAGCCAAAG AAGATATATA ATGCCAGTTA ACCATGAAAC 84423 .......... .......... .......... .......... .......... .......... 134 GAACTGTTAT CATAAGAATA TACATTGTGC ATAGAGTAGA AGACTGTAGA GATGCTATAA 84483 .......... .......... .......... .......... .......... .......... 134 ATTGCTGAAA TTGTGTAGTA AGGAAGCATT TCACACTCCA TTGGCTGGAA ACTCATATAG 84543 .......... .......... .......... .......... .......... .......... 134 GCAGTGAAAG TTACTTTAGG ATGACTCAGC AACATGATTT TAAGTGTGAT GGCCTCTTTG 84603 .......... .......... .......... .......... .......... .......... 134 CTAGTGTTCG TCATTTTTTG AGCACAAACA GAAGTCTTTT ATTGGGTCAC TATTATGTGC 84663 .......... .......... .......... .......... .......... .......... 134 ACATCGACCG AAAATGGTGA AACCTTTCAG TGGCTTATTA CTATGCCTCC AAACACATTT 84723 .......... .......... .......... .......... .......... .......... 134 AGCACTTCTA AGGGTCATTG CAGAAATAAA TATTGCTTGG TGAATACACG TTAATCCTAA 84783 .......... .......... .......... .......... .......... .......... 134 CTTTAGAGGA ACAATGGAAC ATTTCTATTT TACAGAGATA TGGTCAATAC CAGTTACAAT 84843 .......... .......... .......... .......... .......... .......... 134 TGAATTTTTC TTTTCCAAAT ATACAGTCAA TAGTAGTGGA ACACGTAAGA CTTGTGCTCT 84903 .......... .......... .......... .......... .......... .......... 134 GAATTTATTT CACTTGTCTA AGCACATGAT TTTTGACTAG TTCCATTCCT AAATATTGTA 84963 .......... .......... .......... .......... .......... .......... 134 AGACTGATAG ATTGGATCAA GATTGTTATA AAAAAAAATA CAGATTGGGA AAAAGAAATT 85023 .......... .......... .......... .......... .......... .......... 134 CCCTTTCTTT TTGTTTTTGG ATCAAGTTTG TTAAATCATT CACATCTGTC AGATACAAAT 85083 .......... .......... .......... .......... .......... .......... 134 GAAAGAGTCG CATATTGAAG ATAGAGAGAT TGATAGGACT GCTTAGTGAG GTCATATATC 85143 .......... .......... .......... .......... .......... .......... 134 ATAGCACATG GAGTCAGAGA ACTGGTCATG AATCTGAATG TGTCATATGT AGCAGATGCA 85203 .......... .......... .......... .......... .......... .......... 134 AGCTATTGTT AGCTATATCT GCTGGTTATT TCTACTGTAT GGAAGAGCTA GACGCATTGG 85263 .......... .......... .......... .......... .......... .......... 134 CAATAGGGTG CAACTAAATA CTAAGAAATT AAACCTCTTT GCTAAAATTG AGTTCAAATT 85323 .......... .......... .......... .......... .......... .......... 134 AATTCTTCCT GGTCATCTTA TATTTCTTGT ACAAATATAA CATGTGATAA TTTCCAAGAA 85383 .......... .......... .......... .......... .......... .......... 134 TGTGCACTTA GGCTTAGATG TAATTTCCTT TTGATTTCGC TGTTCTCCGC AGCAATAGTT 85443 .......... .......... .......... .......... .......... .......... 134 ATTTGTTTAT TGTATTGTTT TCTCTGCAGG CAAAGGTATA TTATTTAAAT AGACTTACAA 85503 .......... .......... .......... .......... .......... .......... 134 CTCTTTTTGC TTAGCTCTGC TTTGTTGGTT TTTATAAAAG ATTGTGGTGC AGCAAAAATA 85563 .......... .......... .......... .......... .......... .......... 134 TTAAAAGTCA TTAAAATTGT CTTAGAACAC AGAAAGTCTG CAGAATAAAA TTCAAAAACC 85623 .......... .......... .......... .......... .......... .......... 134 TAAATTATCT CGACTAAATT TATCCAACTA AATTTAAACA AAGACTCATG ATGCAAGTTC 85683 .......... .......... .......... .......... .......... .......... 134 TTCAATGAAC ACAGATCCAT TAAGATCAAT GGAAGTTCTA GGAAGAACTC ATAGATCCTA 85743 .......... .......... .......... .......... .......... .......... 134 TAGAAGTTCC GATACCACTT TTTGTTTTTT AAAAGATGTA GAGCAGCAAA AATACTGGAA 85803 .......... .......... .......... .......... .......... .......... 134 GTGATTGAAA TTATCTCTCA ATTTATATTT TTATTTTGAA AATGGTAATT GTTTCTATTT 85863 .......... .......... .......... .......... .......... .......... 134 CTATAGAACC GTACATCCTA TGTACTGAAC CGGTATTTAC ATTAGGAACT CTAATAATAC 85923 .......... .......... .......... .......... .......... .......... 134 CGACATATCC CTATAATGAG TCTAAGACAT CAATGATAGA GACGGTATCA TTAGAGTAAA 85983 .......... .......... .......... .......... .......... .......... 134 TTTGATTACA CCAAAAACAC AGAGTTCAAA TGCAATTCAG TTTAACTTGT TGCATACTAC 86043 .......... .......... .......... .......... .......... .......... 134 TCTCCCTATT CTCAAAAACT CTTAAGGTTC CTCTCTTTCC ATATTGTCCA CCAAATAGTG 86103 .......... .......... .......... .......... .......... .......... 134 GCAGGGACAA TTCTCCAGTT ACTTCTGTTT TTTGCTTGTG TCCCTGCTTC TTCACTATAT 86163 .......... .......... .......... .......... .......... .......... 134 AGAGCCTGTG AAGTTCTCCC AGCATGGACC AGGAGATGTT TTTAAGTCTC AGGAACAGAT 86223 .......... .......... .......... .......... .......... .......... 134 TCCACAACTG GCCAGTGACT TCGCGTTGGA GAAACAAACG ATTGACGGTT TCTGCAGTTT 86283 .......... .......... .......... .......... .......... .......... 134 CCCCACAGAA AAAACATCTA GAGCAAAGTG TAATTCCCCT CTTCGTTAAG TCTCAATTAT 86343 .......... .......... .......... .......... .......... .......... 134 TATTATGGAC AGGCCACAGA GGGTCTAAAT AGCCAACTTA AAAACAGAAA ATCTGTAGAA 86403 .......... .......... .......... .......... .......... .......... 134 TAAAATTCGA AAACCTAAAT TATCTCCACT AAACTACTTA ATTTTAACAA AGTTTACTCC 86463 .......... .......... .......... .......... .......... .......... 134 TGCAACTAAA CAACTTAATA TCCTAGTAAA TCTGCATTAA CAAAAGCAAT TTTGAACACA 86523 .......... .......... .......... .......... .......... .......... 134 TTTAGCTTAC CTAATTTCTT GTTCATTTAT ACTTCTGTTC TGAAATCTTG TTTATTATAT 86583 .......... .......... .......... .......... .......... .......... 134 TATATATATT GTACTTTGTC TCTGCTTTTC TCTCCATTTT TTGCAATAGC ATACATGCAT 86643 .......... .......... .......... .......... .......... .......... 134 GTATTTCTTC CGGTTAGTTA ACTGTTATTT TTTTTACAGG TACTTGCGAA CAGGCCTGAT 86703 | |||||||||| |||||||||| .......... .......... .......... .........G TACTTGCGAA CAGGCCTGAT 155 ATCATCAGAG AAGATTACAT GAATGAACTT TGCATTCTTC AAGATGATGT TCCTGCCTTT 86763 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCATCAGAG AAGATTACAT GAATGAACTT TGCATTCTTC AAGATGATGT TCCTGCCTTT 215 CCTAATCAGG TAACTAGATG ACAAGTGAGG TGCAGGTGAT GCATGCTTTT GTTACATCGA 86823 ||||||||| CCTAATCAG. .......... .......... .......... .......... .......... 224 ACACTTTTCC TTTGAGCAGA AATCATTGAC AATGATGTAG GTTGCTTTTA ACATCATAGA 86883 |||||||||| |||||||||| .......... .......... .......... .......... GTTGCTTTTA ACATCATAGA 244 AGAGGAATTG GGCCAGCCTC TTGAAGCTGT TTTCAGCAAA ATTTCTTCAG AAACTATTGC 86943 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAGGAATTG GGCCAGCCTC TTGAAGCTGT TTTCAGCAAA ATTTCTTCAG AAACTATTGC 304 AGCTGCAAGT TTGGGTCAAG TATACCGAGC TACTTTACGT GCTTCAGGGG AAGAAGTTGC 87003 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCTGCAAGT TTGGGTCAAG TATACCGAGC TACTTTACGT GCTTCAGGGG AAGAAGTTGC 364 CATAAAGGTT GACCGTTTCC TGCTTGCTTG CACTCTTTTT TTCTGTTGAG TGTTGACCAA 87063 ||||||| CATAAAG... .......... .......... .......... .......... .......... 371 TTTTATTGCT AAGTCTTGAA GCCTTTTATC ATATCATCAA TGTGTCACCA CACTTTTGAC 87123 .......... .......... .......... .......... .......... .......... 371 ATTTCTCTTT GACCTTCCTT TATAGTCATT TGGAGAACAC CTGATGCAGA ACTAAAAACA 87183 .......... .......... .......... .......... .......... .......... 371 GCAATAAGAC GATTGTCCAC TACATAAGTA GCTGAAAAAT ATCTGGATGG CCATTGAATA 87243 .......... .......... .......... .......... .......... .......... 371 TAGTCAAGCA GTAAAGCTTT TTAGATTTGT TAAGGTCCAA TATTTCACAC TCGACACAAA 87303 .......... .......... .......... .......... .......... .......... 371 TGTTCATAGA GAAATCATGT GTGTTATCTA ATCATTCCTT TTTTATGCTA GTTTCATATA 87363 .......... .......... .......... .......... .......... .......... 371 CATATATGCA TCTCATTTGA AGCATCTGGC TGTTCTTAGA AGCTTCAAAG AATTGATTTA 87423 .......... .......... .......... .......... .......... .......... 371 ACAATATGAT GCAGTGGTAT TCATAATTGG GTTTGCTCTT TCCTTTTAGG TGCTAAGGCC 87483 | |||||||||| .......... .......... .......... .......... .........G TGCTAAGGCC 382 GCAAATAGAG CCTATCATCT ACAGAGATCT TTTTCTCTTC CGCACTCTAG CTTCCTTCTT 87543 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAAATAGAG CCTATCATCT ACAGAGATCT TTTTCTCTTC CGCACTCTAG CTTCCTTCTT 442 GAATGGCATC AGTCTACAGA AACTGGGGTG TAATGCTGAG CTTATAGTTG ATGAATTTGG 87603 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAATGGCATC AGTCTACAGA AACTGGGGTG TAATGCTGAG CTTATAGTTG ATGAATTTGG 502 TGAGAAGCTA TTGGAGGAGT TGGATTATAC CTTGGTAGTG CTGCACATTC CTATTTTTGC 87663 |||||||||| |||||||||| |||||||||| ||| | | TGAGAAGCTA TTGGAGGAGT TGGATTATAC CTTTGGA... .......... .......... 539 AATTGAATGA GGAAAGAAGT TTTGCTTATT TTGGAAGTCT TTCAATGTTG TGTTATGTAA 87723 .......... .......... .......... .......... .......... .......... 539 TCATCCCTCT TCTTTTTCCT TTCTAGGAAG CTCGTAATAT CGAAGACTTC TTGGAAAATT 87783 ||| |||||||||| |||| ||||| |||||||||| .......... .......... ......-AAG CTCGTAATAT CGAAAACTTC TTGGAAAATT 572 T 87784 | T 573 hqPGS_C08HBa0336I24.1+_SGN-E369703+ (84124 84254,86683 86772,86864 87010,87473 87640,87750 87784) ******************************************************************************** EST sequence 47 +strand 521 n (File: SGN-E247217+) 1 TCGTGCCGCT TTACTGGACT ACACTGGTGT ATGATTATTT GGTGGGTCGT GACTAAGAAG 61 TTGTTCCTTT CCGTGCTCGG TAGGTGAAGA AGCTTTTGTG TGATTTGGGA CCTTCTTTCA 121 TCAAAGCAGG ACAGGTACTT GCGAACAGGC CTGATATCAT CAGAGAAGAT TACATGAATG 181 AACTTTGCAT TCTTCAAGAT GATGTTCCTG CCTTTCCTAA TCAGGTTGCT TTTAACATCA 241 TAGAAGAGGA ATTGGGCCAG CCTCTTGAAG CTGTTTTCAG CAAAATTTCT TCAGAAACTA 301 TTGCAGCTGC AAGTTTGGGT CAAGTATACC GAGCTACTTT ACGTGCTTCA GGGGAAGAAG 361 TTGCCATAAA GGTGCTAAGG CCGCAAATAG AGCCTATCAT CTACAGAGAT CTTTTTCTCT 421 TCCGCACTCT AGCTTCCTTC TTGAATGGCA TCAGTCTACA GAAACTGGGG TGTAATGCTG 481 AGCTTATAGT TGATGAATTT GGTGAGAAGC TATTGGAGGA G Predicted gene structure (within gDNA segment 83458 to 88232): Exon 1 84124 84254 ( 131 n); cDNA 4 134 ( 131 n); score: 0.954 Intron 1 84255 86682 (2428 n); Pd: 0.993 (s: 0.98), Pa: 1.000 (s: 1.00) Exon 2 86683 86772 ( 90 n); cDNA 135 224 ( 90 n); score: 1.000 Intron 2 86773 86863 ( 91 n); Pd: 0.974 (s: 1.00), Pa: 0.996 (s: 1.00) Exon 3 86864 87010 ( 147 n); cDNA 225 371 ( 147 n); score: 1.000 Intron 3 87011 87472 ( 462 n); Pd: 0.914 (s: 1.00), Pa: 0.991 (s: 1.00) Exon 4 87473 87622 ( 150 n); cDNA 372 521 ( 150 n); score: 1.000 MATCH C08HBa0336I24.1+ SGN-E247217+ 0.988 518 0.994 C PGS_C08HBa0336I24.1+_SGN-E247217+ (84124 84254,86683 86772,86864 87010,87473 87622) Alignment (genomic DNA sequence = upper lines): TGGGGCTTTA CTGGACTACA CTGGTGTATG ATTATTTGGT GGGTCGTGAC GAAGAAGTTG 84183 || |||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| TGCCGCTTTA CTGGACTACA CTGGTGTATG ATTATTTGGT GGGTCGTGAC TAAGAAGTTG 63 TTCCTTTCCG TGCTCGGCAG CTGAGGAAGC TTTTGTGTGA TTTGGGACCT TCTTTCATCA 84243 |||||||||| ||||||| || ||| ||||| |||||||||| |||||||||| |||||||||| TTCCTTTCCG TGCTCGGTAG GTGAAGAAGC TTTTGTGTGA TTTGGGACCT TCTTTCATCA 123 AAGCAGGACA GGTTTGGTGT TTTTAAATTT CTAAAGTTCA TGAACAATTG GTTGTTATAT 84303 |||||||||| | AAGCAGGACA G......... .......... .......... .......... .......... 134 TTTTCGTGAA TGAGTATTGC TCTACTTGGA AATTTTAGAC TTCAGAATCT TAAACTGGAA 84363 .......... .......... .......... .......... .......... .......... 134 AATGATTCTG TATTGGCTGT GTAGCCAAAG AAGATATATA ATGCCAGTTA ACCATGAAAC 84423 .......... .......... .......... .......... .......... .......... 134 GAACTGTTAT CATAAGAATA TACATTGTGC ATAGAGTAGA AGACTGTAGA GATGCTATAA 84483 .......... .......... .......... .......... .......... .......... 134 ATTGCTGAAA TTGTGTAGTA AGGAAGCATT TCACACTCCA TTGGCTGGAA ACTCATATAG 84543 .......... .......... .......... .......... .......... .......... 134 GCAGTGAAAG TTACTTTAGG ATGACTCAGC AACATGATTT TAAGTGTGAT GGCCTCTTTG 84603 .......... .......... .......... .......... .......... .......... 134 CTAGTGTTCG TCATTTTTTG AGCACAAACA GAAGTCTTTT ATTGGGTCAC TATTATGTGC 84663 .......... .......... .......... .......... .......... .......... 134 ACATCGACCG AAAATGGTGA AACCTTTCAG TGGCTTATTA CTATGCCTCC AAACACATTT 84723 .......... .......... .......... .......... .......... .......... 134 AGCACTTCTA AGGGTCATTG CAGAAATAAA TATTGCTTGG TGAATACACG TTAATCCTAA 84783 .......... .......... .......... .......... .......... .......... 134 CTTTAGAGGA ACAATGGAAC ATTTCTATTT TACAGAGATA TGGTCAATAC CAGTTACAAT 84843 .......... .......... .......... .......... .......... .......... 134 TGAATTTTTC TTTTCCAAAT ATACAGTCAA TAGTAGTGGA ACACGTAAGA CTTGTGCTCT 84903 .......... .......... .......... .......... .......... .......... 134 GAATTTATTT CACTTGTCTA AGCACATGAT TTTTGACTAG TTCCATTCCT AAATATTGTA 84963 .......... .......... .......... .......... .......... .......... 134 AGACTGATAG ATTGGATCAA GATTGTTATA AAAAAAAATA CAGATTGGGA AAAAGAAATT 85023 .......... .......... .......... .......... .......... .......... 134 CCCTTTCTTT TTGTTTTTGG ATCAAGTTTG TTAAATCATT CACATCTGTC AGATACAAAT 85083 .......... .......... .......... .......... .......... .......... 134 GAAAGAGTCG CATATTGAAG ATAGAGAGAT TGATAGGACT GCTTAGTGAG GTCATATATC 85143 .......... .......... .......... .......... .......... .......... 134 ATAGCACATG GAGTCAGAGA ACTGGTCATG AATCTGAATG TGTCATATGT AGCAGATGCA 85203 .......... .......... .......... .......... .......... .......... 134 AGCTATTGTT AGCTATATCT GCTGGTTATT TCTACTGTAT GGAAGAGCTA GACGCATTGG 85263 .......... .......... .......... .......... .......... .......... 134 CAATAGGGTG CAACTAAATA CTAAGAAATT AAACCTCTTT GCTAAAATTG AGTTCAAATT 85323 .......... .......... .......... .......... .......... .......... 134 AATTCTTCCT GGTCATCTTA TATTTCTTGT ACAAATATAA CATGTGATAA TTTCCAAGAA 85383 .......... .......... .......... .......... .......... .......... 134 TGTGCACTTA GGCTTAGATG TAATTTCCTT TTGATTTCGC TGTTCTCCGC AGCAATAGTT 85443 .......... .......... .......... .......... .......... .......... 134 ATTTGTTTAT TGTATTGTTT TCTCTGCAGG CAAAGGTATA TTATTTAAAT AGACTTACAA 85503 .......... .......... .......... .......... .......... .......... 134 CTCTTTTTGC TTAGCTCTGC TTTGTTGGTT TTTATAAAAG ATTGTGGTGC AGCAAAAATA 85563 .......... .......... .......... .......... .......... .......... 134 TTAAAAGTCA TTAAAATTGT CTTAGAACAC AGAAAGTCTG CAGAATAAAA TTCAAAAACC 85623 .......... .......... .......... .......... .......... .......... 134 TAAATTATCT CGACTAAATT TATCCAACTA AATTTAAACA AAGACTCATG ATGCAAGTTC 85683 .......... .......... .......... .......... .......... .......... 134 TTCAATGAAC ACAGATCCAT TAAGATCAAT GGAAGTTCTA GGAAGAACTC ATAGATCCTA 85743 .......... .......... .......... .......... .......... .......... 134 TAGAAGTTCC GATACCACTT TTTGTTTTTT AAAAGATGTA GAGCAGCAAA AATACTGGAA 85803 .......... .......... .......... .......... .......... .......... 134 GTGATTGAAA TTATCTCTCA ATTTATATTT TTATTTTGAA AATGGTAATT GTTTCTATTT 85863 .......... .......... .......... .......... .......... .......... 134 CTATAGAACC GTACATCCTA TGTACTGAAC CGGTATTTAC ATTAGGAACT CTAATAATAC 85923 .......... .......... .......... .......... .......... .......... 134 CGACATATCC CTATAATGAG TCTAAGACAT CAATGATAGA GACGGTATCA TTAGAGTAAA 85983 .......... .......... .......... .......... .......... .......... 134 TTTGATTACA CCAAAAACAC AGAGTTCAAA TGCAATTCAG TTTAACTTGT TGCATACTAC 86043 .......... .......... .......... .......... .......... .......... 134 TCTCCCTATT CTCAAAAACT CTTAAGGTTC CTCTCTTTCC ATATTGTCCA CCAAATAGTG 86103 .......... .......... .......... .......... .......... .......... 134 GCAGGGACAA TTCTCCAGTT ACTTCTGTTT TTTGCTTGTG TCCCTGCTTC TTCACTATAT 86163 .......... .......... .......... .......... .......... .......... 134 AGAGCCTGTG AAGTTCTCCC AGCATGGACC AGGAGATGTT TTTAAGTCTC AGGAACAGAT 86223 .......... .......... .......... .......... .......... .......... 134 TCCACAACTG GCCAGTGACT TCGCGTTGGA GAAACAAACG ATTGACGGTT TCTGCAGTTT 86283 .......... .......... .......... .......... .......... .......... 134 CCCCACAGAA AAAACATCTA GAGCAAAGTG TAATTCCCCT CTTCGTTAAG TCTCAATTAT 86343 .......... .......... .......... .......... .......... .......... 134 TATTATGGAC AGGCCACAGA GGGTCTAAAT AGCCAACTTA AAAACAGAAA ATCTGTAGAA 86403 .......... .......... .......... .......... .......... .......... 134 TAAAATTCGA AAACCTAAAT TATCTCCACT AAACTACTTA ATTTTAACAA AGTTTACTCC 86463 .......... .......... .......... .......... .......... .......... 134 TGCAACTAAA CAACTTAATA TCCTAGTAAA TCTGCATTAA CAAAAGCAAT TTTGAACACA 86523 .......... .......... .......... .......... .......... .......... 134 TTTAGCTTAC CTAATTTCTT GTTCATTTAT ACTTCTGTTC TGAAATCTTG TTTATTATAT 86583 .......... .......... .......... .......... .......... .......... 134 TATATATATT GTACTTTGTC TCTGCTTTTC TCTCCATTTT TTGCAATAGC ATACATGCAT 86643 .......... .......... .......... .......... .......... .......... 134 GTATTTCTTC CGGTTAGTTA ACTGTTATTT TTTTTACAGG TACTTGCGAA CAGGCCTGAT 86703 | |||||||||| |||||||||| .......... .......... .......... .........G TACTTGCGAA CAGGCCTGAT 155 ATCATCAGAG AAGATTACAT GAATGAACTT TGCATTCTTC AAGATGATGT TCCTGCCTTT 86763 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCATCAGAG AAGATTACAT GAATGAACTT TGCATTCTTC AAGATGATGT TCCTGCCTTT 215 CCTAATCAGG TAACTAGATG ACAAGTGAGG TGCAGGTGAT GCATGCTTTT GTTACATCGA 86823 ||||||||| CCTAATCAG. .......... .......... .......... .......... .......... 224 ACACTTTTCC TTTGAGCAGA AATCATTGAC AATGATGTAG GTTGCTTTTA ACATCATAGA 86883 |||||||||| |||||||||| .......... .......... .......... .......... GTTGCTTTTA ACATCATAGA 244 AGAGGAATTG GGCCAGCCTC TTGAAGCTGT TTTCAGCAAA ATTTCTTCAG AAACTATTGC 86943 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAGGAATTG GGCCAGCCTC TTGAAGCTGT TTTCAGCAAA ATTTCTTCAG AAACTATTGC 304 AGCTGCAAGT TTGGGTCAAG TATACCGAGC TACTTTACGT GCTTCAGGGG AAGAAGTTGC 87003 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCTGCAAGT TTGGGTCAAG TATACCGAGC TACTTTACGT GCTTCAGGGG AAGAAGTTGC 364 CATAAAGGTT GACCGTTTCC TGCTTGCTTG CACTCTTTTT TTCTGTTGAG TGTTGACCAA 87063 ||||||| CATAAAG... .......... .......... .......... .......... .......... 371 TTTTATTGCT AAGTCTTGAA GCCTTTTATC ATATCATCAA TGTGTCACCA CACTTTTGAC 87123 .......... .......... .......... .......... .......... .......... 371 ATTTCTCTTT GACCTTCCTT TATAGTCATT TGGAGAACAC CTGATGCAGA ACTAAAAACA 87183 .......... .......... .......... .......... .......... .......... 371 GCAATAAGAC GATTGTCCAC TACATAAGTA GCTGAAAAAT ATCTGGATGG CCATTGAATA 87243 .......... .......... .......... .......... .......... .......... 371 TAGTCAAGCA GTAAAGCTTT TTAGATTTGT TAAGGTCCAA TATTTCACAC TCGACACAAA 87303 .......... .......... .......... .......... .......... .......... 371 TGTTCATAGA GAAATCATGT GTGTTATCTA ATCATTCCTT TTTTATGCTA GTTTCATATA 87363 .......... .......... .......... .......... .......... .......... 371 CATATATGCA TCTCATTTGA AGCATCTGGC TGTTCTTAGA AGCTTCAAAG AATTGATTTA 87423 .......... .......... .......... .......... .......... .......... 371 ACAATATGAT GCAGTGGTAT TCATAATTGG GTTTGCTCTT TCCTTTTAGG TGCTAAGGCC 87483 | |||||||||| .......... .......... .......... .......... .........G TGCTAAGGCC 382 GCAAATAGAG CCTATCATCT ACAGAGATCT TTTTCTCTTC CGCACTCTAG CTTCCTTCTT 87543 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAAATAGAG CCTATCATCT ACAGAGATCT TTTTCTCTTC CGCACTCTAG CTTCCTTCTT 442 GAATGGCATC AGTCTACAGA AACTGGGGTG TAATGCTGAG CTTATAGTTG ATGAATTTGG 87603 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAATGGCATC AGTCTACAGA AACTGGGGTG TAATGCTGAG CTTATAGTTG ATGAATTTGG 502 TGAGAAGCTA TTGGAGGAG 87622 |||||||||| ||||||||| TGAGAAGCTA TTGGAGGAG 521 hqPGS_C08HBa0336I24.1+_SGN-E247217+ (84124 84254,86683 86772,86864 87010,87473 87622) ******************************************************************************** EST sequence 56 +strand 522 n (File: SGN-E260234+) 1 AAAATTTCAA AGATGACCCT ACTGTTAAAA TACCTCGGGT TTACAGACAG CTTTCTGGTT 61 CACGTGTTTT GGTGATGGAG TGGATTGATG GAATTCGGTG CACTGATCCA CAGGCAATCA 121 GAGATGAAGG AATTGATATA GATGGATTTT TAACTGTTGG AGTTAGTGCA GCCTTGAGGC 181 AGCTCCTCGA ATTTGGCCTA TTTCATGGGG ACCCTCATCC TGGGAATATC TTTGCTATGC 241 GTGATGGACG CATTGCCTAT GTGGACTTTG GTAATGTTGC TGTGCTCAGT CAGCAAAATA 301 AACAGATTCT GATTGATGCT GTTGTCCATG CGGTGAATGA GGACTATGCT GAGATGGCAA 361 ATGATTTTAC CAGGTTGGGA TTCCTAGCTA GTGGAACTGA TGTTGCCCCT ATTGTTCCAG 421 CATTAGAAGC AATATGGCAA AATTCACTTG AAAAAGGACT TGCCGACTTC AATTTCAAAA 481 GTGTTACAGG CAAATTCAAT CAACTAGTTT ACAACTATCC TA Predicted gene structure (within gDNA segment 87178 to 95521): Exon 1 87778 87890 ( 113 n); cDNA 1 113 ( 113 n); score: 1.000 Intron 1 87891 87967 ( 77 n); Pd: 0.876 (s: 1.00), Pa: 0.993 (s: 1.00) Exon 2 87968 88147 ( 180 n); cDNA 114 293 ( 180 n); score: 1.000 Intron 2 88148 91386 (3239 n); Pd: 0.983 (s: 1.00), Pa: 0.990 (s: 1.00) Exon 3 91387 91582 ( 196 n); cDNA 294 489 ( 196 n); score: 0.995 Intron 3 91583 94878 (3296 n); Pd: 0.990 (s: 0.98), Pa: 0.439 (s: 0) Exon 4 94879 94911 ( 33 n); cDNA 490 522 ( 33 n); score: 1.000 MATCH C08HBa0336I24.1+ SGN-E260234+ 0.998 522 1.000 C PGS_C08HBa0336I24.1+_SGN-E260234+ (87778 87890,87968 88147,91387 91582,94879 94911) Alignment (genomic DNA sequence = upper lines): AAAATTTCAA AGATGACCCT ACTGTTAAAA TACCTCGGGT TTACAGACAG CTTTCTGGTT 87837 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAATTTCAA AGATGACCCT ACTGTTAAAA TACCTCGGGT TTACAGACAG CTTTCTGGTT 60 CACGTGTTTT GGTGATGGAG TGGATTGATG GAATTCGGTG CACTGATCCA CAGGTGTGGA 87897 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| CACGTGTTTT GGTGATGGAG TGGATTGATG GAATTCGGTG CACTGATCCA CAG....... 113 TCTTTAGTTT TCCTCAGCGT GCTTTGGGAT GTCCTCCTTG TGTTAATACA TCGTCATTCT 87957 .......... .......... .......... .......... .......... .......... 113 TGTGACTTAG GCAATCAGAG ATGAAGGAAT TGATATAGAT GGATTTTTAA CTGTTGGAGT 88017 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| .......... GCAATCAGAG ATGAAGGAAT TGATATAGAT GGATTTTTAA CTGTTGGAGT 163 TAGTGCAGCC TTGAGGCAGC TCCTCGAATT TGGCCTATTT CATGGGGACC CTCATCCTGG 88077 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGTGCAGCC TTGAGGCAGC TCCTCGAATT TGGCCTATTT CATGGGGACC CTCATCCTGG 223 GAATATCTTT GCTATGCGTG ATGGACGCAT TGCCTATGTG GACTTTGGTA ATGTTGCTGT 88137 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAATATCTTT GCTATGCGTG ATGGACGCAT TGCCTATGTG GACTTTGGTA ATGTTGCTGT 283 GCTCAGTCAG GTAATTTGGT GGATCGACTG TATATCTGGT ATTTAGTTAA AGGCCTATCC 88197 |||||||||| GCTCAGTCAG .......... .......... .......... .......... .......... 293 CATCGGTAGC CACCTAAAGT TGGCATCAAT TTTCACTTGG ACACCTCAAG TAGGCTTATT 88257 .......... .......... .......... .......... .......... .......... 293 CATTTTAAAC ACTTACAGGG GGACGTTGTG TCATATTGAC ATGTTTTTGA CAACCAACCA 88317 .......... .......... .......... .......... .......... .......... 293 AATATATAAG ATATGTGTAT TACACTCGCC GATGACGTGT CAAAGTAGTG AGTTAAATAA 88377 .......... .......... .......... .......... .......... .......... 293 TGACATGTGA CATATATGTA AAAAGAAATT AATAAAAAAA TATATTATGA ATAAAAACCC 88437 .......... .......... .......... .......... .......... .......... 293 ATTTTAAAAC TATTTAATTA ATTAAAAATG TACCTTTCAA TAAAGAAGAA AAAGGGAAAA 88497 .......... .......... .......... .......... .......... .......... 293 AAATGAAATC TACAACACCT TTATTTTTCT CCTCCATTTT CAGCCTTCAC CATTTACACA 88557 .......... .......... .......... .......... .......... .......... 293 TCTCCTCCTC CTCCACTAAC CGCTATTACT TTGATGCCTT CTTCTTCAAG TTTGAAGATT 88617 .......... .......... .......... .......... .......... .......... 293 ATCACTACCA TCATCTTTTT CTTCAAATCT ATATAACCAA TATGGGTCAT AAGCAAATAC 88677 .......... .......... .......... .......... .......... .......... 293 CCATAATCTA GCCATCATAC TATAGCCCGA CAAATATTAT CCATGGTAAA ATCAGATTTG 88737 .......... .......... .......... .......... .......... .......... 293 TTTATGAATT TACTTGAAAT GTGTTCATCA AAATAGAAAA AGTTAAAAGC TTTGAGAAGC 88797 .......... .......... .......... .......... .......... .......... 293 AGAAATTAGT ATTTCAAAAA TTAAATCTGA AAAAAATTAA CTCAAATAGA GAGAGGTGAA 88857 .......... .......... .......... .......... .......... .......... 293 AGTAGACCAA CAAACATTTA AAGGATTCGG TAAACTTTCC GGCAATGAAA CTATAAAAAA 88917 .......... .......... .......... .......... .......... .......... 293 GATTAGATGG AAAAATTTGA TATCATGAAG AAGATATATG CTCTAGACAT ATTTTTTGCT 88977 .......... .......... .......... .......... .......... .......... 293 CCTTTCTTAA ATTATTTTTG TTGATATATA TAATTAATTT AATTTTCCAT ATCAAGAAAT 89037 .......... .......... .......... .......... .......... .......... 293 GACAAAAAGA GGAGAAAGTT GAATATACTA TGGTGGCAAG ATGGTGGTAT ATGGAGGAGG 89097 .......... .......... .......... .......... .......... .......... 293 AAGTGTGGGA AGGAGAGAGA AGGAAGAAAA AGAAATAAAA AAGTTTTAAA ATCATAAAAT 89157 .......... .......... .......... .......... .......... .......... 293 TGTCTTTCAC GTGGTCAAAG TAAGTGTAAC ACACATAATA TGCTAACTCA ACAAAAAGTG 89217 .......... .......... .......... .......... .......... .......... 293 TCAAAATGAC ATAATCGGAT CCTACTTAAA GTGTCTAAAA TGAACATCAT CTAGTTGAAG 89277 .......... .......... .......... .......... .......... .......... 293 TGCCTATGTG AAATTTGGTG CCAATTTTAG GGGGCAACCG ATGGGTTTGA CCTTAGTTAA 89337 .......... .......... .......... .......... .......... .......... 293 ATGATACCTG ATGTGATTGG CTTTATGTGT ATGTGTGTGT TCAATGAGCA TGCCAAATAC 89397 .......... .......... .......... .......... .......... .......... 293 AGGTCACAAG TAATCCCCGG CAATCTATTA TGGTCTTAGA ATAACATATG GTCATGTATT 89457 .......... .......... .......... .......... .......... .......... 293 CATCCTCCTT AGATTACCTA AATCGAAAGT TAGGAGGTCA AATTTGCTAT CATTGACCCG 89517 .......... .......... .......... .......... .......... .......... 293 AAGTTATTGC ATGCCCAAAT GCATCTATTG CTACATAAGT TTGAGGTATT TGTAAACTAT 89577 .......... .......... .......... .......... .......... .......... 293 GAAACTCTGA AGAAGGTGAG AATTGAGGGT TTGTAATTGC TGATTATTGG GTAAAGTTGA 89637 .......... .......... .......... .......... .......... .......... 293 TAAGTAGAAC ATGTTGGTTA ATATCAACTT GCTAGTATAG GGTTGTCTAG ATTCTGCAAG 89697 .......... .......... .......... .......... .......... .......... 293 TGGTTGCAGG CCCTTTCTTT TAACCGCTGT AAGGGAAATG GAAAGAAGAA CACCCCTTTT 89757 .......... .......... .......... .......... .......... .......... 293 CTATTTTGGA TGTACTATGA ATATAGTATT CCTTGTGGCT TTGCATAGTC ATTTCTTCTT 89817 .......... .......... .......... .......... .......... .......... 293 TGATGATATA TGTGATGATG TAATAATATT ACAATGTTAT GCTAGAAATC TCAAAAATCG 89877 .......... .......... .......... .......... .......... .......... 293 GAGTTTCCTA TGAGAAACTT CAGTCAATGT GCTGAAAATC TTCAATCTCT TTCCTTTCGA 89937 .......... .......... .......... .......... .......... .......... 293 TGCAAACTGA ATCATGAGAG ATGTATTACA AGATATGATG CATACTAAAG TTAATTATAT 89997 .......... .......... .......... .......... .......... .......... 293 CAATCAGGAA GGTAGTGTTC GGGTGATATT TGTATTGTGA GCTATGAGCC TCACCAAGAG 90057 .......... .......... .......... .......... .......... .......... 293 AATGATCATT AATGTGAAAG GGGAGGTCTG GTGTTAGAGG CTTAGCTGAC TTCTATCTAC 90117 .......... .......... .......... .......... .......... .......... 293 AAACTGGGAT TAGTCCTGCT TTCTATTTGG TCATTTTGTG CTTCAACTTT TTGAATTGGA 90177 .......... .......... .......... .......... .......... .......... 293 AGAATCCATA TGAGGAGGTG TAGAGAATAG AAGACTAGGG GGTAGACAGG AGGTACCTAG 90237 .......... .......... .......... .......... .......... .......... 293 CGAGCTATTC TACTGAATTT CACCTAAATC CTCAGGTTCA TTCCAGTTCC AATCTGTTTA 90297 .......... .......... .......... .......... .......... .......... 293 TTGTTGCTTT AAGTCTTTGC TCAGATGAAC TTTCAACCAC CTATCTGTTC AGAGGAGAGA 90357 .......... .......... .......... .......... .......... .......... 293 CTCAATGCCT TAACTATGGT AAAGAAAATT AGAAGAGAAG AAGATTTTTT CCAGAATAAT 90417 .......... .......... .......... .......... .......... .......... 293 GACCTAAGAT TAAATGTTCA GATGAGGGAC TCTATCTGGA CTCTGATTTC ATGAAGAAAA 90477 .......... .......... .......... .......... .......... .......... 293 AGAGAGGAAG ATTTTCCAAA ACAGTGGCCT GTAATTCAAT GCTAGAGGAA CTCAATAGCT 90537 .......... .......... .......... .......... .......... .......... 293 AAACTTGTAG CATGAAGAGA AGGAAGAGAA GAAGATTTTG AGTAAGGGAC TCATTACCCA 90597 .......... .......... .......... .......... .......... .......... 293 AAGTCTAATA TCATGAAAAA GAAGAAACAA AGAATACTTC TTAGTTCAGA ACCTAAACTT 90657 .......... .......... .......... .......... .......... .......... 293 CAATTTTGCA AAGAGGTGTT TAGCTTGAAA TGTCACCAAA ATATGGGGCT AGAAAAGTAG 90717 .......... .......... .......... .......... .......... .......... 293 TGCGCTAGAC GTTCATTGAA AAGAAACACA AGTTTACCAG AATGGTCATC GAAAGGGGCA 90777 .......... .......... .......... .......... .......... .......... 293 CGTATGCTGC CACAATGGTC ACCAGAAAAA AGGTATCTAG CTGTCAGAAC AATCACCGGG 90837 .......... .......... .......... .......... .......... .......... 293 AACTAAGGAG GCATGGATAG TAAAACATAG AAAAGAAAGA AAACCTTCAA CGGGGGGTGG 90897 .......... .......... .......... .......... .......... .......... 293 GGGGTGACAC AAGACCACCC TGCAGTAGGC ACAAGTTACT TGAATCTCTA CCAAGATTAT 90957 .......... .......... .......... .......... .......... .......... 293 AGGGACTGTT GTACCATATG AAAAGAGAAA CCTCTCTTGA AATTAGTTTG AGGAATAATG 91017 .......... .......... .......... .......... .......... .......... 293 TACAAGATCA GCTTCTCATT TTAGAGTCTT ATGTATGTAC AATATGTTAA ATAATTATTC 91077 .......... .......... .......... .......... .......... .......... 293 TCTTTTATCT TTTTTGTTTC ATAAAAAAAA TTTCTCTTAA ACAAACAGGG TTAGTAAATA 91137 .......... .......... .......... .......... .......... .......... 293 CAAAATATTT TATGGTATCC TTGTGAATAG AATGAAACAC CCTCCAAAAT TAGGGTCTGC 91197 .......... .......... .......... .......... .......... .......... 293 ATACATCCTA CCTTCCCCAG GTCGTTGTTG TACCCTCCAA AATTCTCCTA GTTTAGTTCA 91257 .......... .......... .......... .......... .......... .......... 293 CTGAGTCAAG AGTTCTATGG AATATTATTA GTTCTCTTTA CTTTCAACAT GTATAATTGC 91317 .......... .......... .......... .......... .......... .......... 293 CCGGAGCTAC TTGTGTATTT TCCAGTTGGC CTGCAATTTT GATTCTCTCT GTCTGTCTTC 91377 .......... .......... .......... .......... .......... .......... 293 TCTTTTCAGC AAAATAAACA GATTCTGATT GATGCTGTTG TCCATGCGGT GAATGAGGAC 91437 | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| .........C AAAATAAACA GATTCTGATT GATGCTGTTG TCCATGCGGT GAATGAGGAC 344 TATGCTGAGA TGGCAAATGA TTTTACCAGG TTGGGATTCC TAGCTAGTGG AACTGATGTT 91497 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATGCTGAGA TGGCAAATGA TTTTACCAGG TTGGGATTCC TAGCTAGTGG AACTGATGTT 404 GCCCCTATTG TTCCAGCATT AGAAGCAATA TGGCAAAATT CACTTGAAAA AGGACTTGCC 91557 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCCCTATTG TTCCAGCATT AGAAGCAATA TGGCAAAATT CACTTGAAAA AGGACTTGCC 464 GACTTCAATT TCAGAAGTGT TACAGGTACC TTGAATAACT AGCTTTGTTA ATGGCTCACT 91617 |||||||||| ||| |||||| ||||| GACTTCAATT TCAAAAGTGT TACAG..... .......... .......... .......... 489 TTGCTCTTGA TCCTATTAAT TGCACCCTGC TCCCAACTTC TAGAAAATTT TGTGTTTAAT 91677 .......... .......... .......... .......... .......... .......... 489 CCTGTGTAGC CCCTTAGTTG GTTATTATGC CCTTTGAAGT TGGCACTAGT AGATATGTGA 91737 .......... .......... .......... .......... .......... .......... 489 AACTAAGCAG CTAAGAACGA TAGACATTGT GATAACGGAT GCCCTAAACA ACAAGCTCTC 91797 .......... .......... .......... .......... .......... .......... 489 ACCATTCAGA TCCTTATGAC ACCTAAAATT TGCAGCACAC TTTGTTGCAC CAAGATAGAG 91857 .......... .......... .......... .......... .......... .......... 489 ATTAAGCTAT GGTTGTTTTT CGTAACCGTT TCCTTCTTTC TATACTGTCC ATTGTAGAAA 91917 .......... .......... .......... .......... .......... .......... 489 TTGATAACCT ACTAATGTGA GCTTAGTATT TCTAAAGTAA GATATTTCAT GCTTTGACTG 91977 .......... .......... .......... .......... .......... .......... 489 GTGCATGCTT GCATCATTCT ATCAATTCAT TTTACTGGAT TAGCATCCTT GAGCAGGAAG 92037 .......... .......... .......... .......... .......... .......... 489 AGAGTAGATA CCACACAGCA TCTTGGCCTT GGGTATGGCC TATAATATTA TAATTGTAGC 92097 .......... .......... .......... .......... .......... .......... 489 TTCACTTGGA ACACTGCAGT TTTAGAGATG AGGTGGTCTT TTGACTGGAA ATTTGAGCTG 92157 .......... .......... .......... .......... .......... .......... 489 CAACCTGCCC CATTGCCTAA TTCATGGGAT GCAAGGATAT ATATTATAAT CTTCTGTTTT 92217 .......... .......... .......... .......... .......... .......... 489 GCTGATCAAG CTGTTCACTG AGAAAACATT ATGGAATTAG GTATGTTTGG TAATTGGAAA 92277 .......... .......... .......... .......... .......... .......... 489 ATTCCACAAA GAAGTCATTT TGTAGTGGTT GTTTACTGGA AAATATTTTT AGGAAAAGGG 92337 .......... .......... .......... .......... .......... .......... 489 GGAAGTTGAC TTCACTTAAA GGTGGAAGTA ATTTTCCTCA CCAATAATCC AATTCTTAGT 92397 .......... .......... .......... .......... .......... .......... 489 CCATGTCACT TGCTATAACC AACACTTACT CGATAAAACA CTATCCAACT GACATTATTA 92457 .......... .......... .......... .......... .......... .......... 489 TGAATCTTTA TTGAATATTG TTTTACAAAG TACTTGTTAT TCACCATTAA AACATTGAAA 92517 .......... .......... .......... .......... .......... .......... 489 AGTAAGTGAG GAAGCCACTT AATTCCCTGA AAAAAACATT TTCCAATATA ACATACATTT 92577 .......... .......... .......... .......... .......... .......... 489 TTACTTTATA GGTTTAAAGA ATTTAGGTAT CGTGAAAAAT ACAGCTCTGA AAGGATTCTA 92637 .......... .......... .......... .......... .......... .......... 489 TATTCAGCAA AAACCTTCTA ATACATGTAT GTGATATTCT CACATTGTTA GACTGCTCAG 92697 .......... .......... .......... .......... .......... .......... 489 ACAGTGACCT TGCAGACTGT TATGGTTACT AATCTGTTTT TCTTCGTTAG AAATAAGCAT 92757 .......... .......... .......... .......... .......... .......... 489 TATTAGACTT ATTATAGAGA TCGAGTAATT AGGAAAATTG AAAAATCTTG TTAGCTGGCT 92817 .......... .......... .......... .......... .......... .......... 489 TGAGGGTAAT TCTGGTTACA AAACCACATA AATATTGGTT AAACTTATAA TGATGACATA 92877 .......... .......... .......... .......... .......... .......... 489 CTTGTTTACA TGCCTGATGT GTTTTATTCT GGGAGTGAAT GAAGCTTCAG ATATATTGCC 92937 .......... .......... .......... .......... .......... .......... 489 TATGCTCTGT TGATTTATTC ATTTTGTCTC TCCCTTATTC TTGATGTTCC ACCTAATTTT 92997 .......... .......... .......... .......... .......... .......... 489 TATCATTTGT CATGTCCTCA AAATACTAAA ATTACTGAAC CAAAACCTTT CTTTTAATCA 93057 .......... .......... .......... .......... .......... .......... 489 ATAAAACTAC AGAATTTATA TCTTCAGCCT GAAAGTTGCA GCTATACCTT CTATTCTGTC 93117 .......... .......... .......... .......... .......... .......... 489 ACTCTTCCAG CTGCAGAACT TCTCATGCAT CATCTCCATA CCTAGGCTAG GATCTTGATT 93177 .......... .......... .......... .......... .......... .......... 489 GAGTTGAATA CTATGGGCAT TCAGATCCTT ATCTTGTTCT GTTGATAAGT TACGCAGGGG 93237 .......... .......... .......... .......... .......... .......... 489 TCATTGATGT AGAGATTAGT AATGCTAGGA TTAGTATTGC TGATTATTTC TTTTTGAATA 93297 .......... .......... .......... .......... .......... .......... 489 TCTAGTTTGA TATATTACAA ATTAGAAATT TTCTTCCTAT TATGAGTGTT AGCTTTCATC 93357 .......... .......... .......... .......... .......... .......... 489 AATTAATAGT TTTAATCCGT GTATTACTAA TATCCACATT CTGATTTCAC ATTTACCTCG 93417 .......... .......... .......... .......... .......... .......... 489 TTTAAAATAT TTACACAGAT TCCCACATAT CTCTTATCCA TGTAATATTT ATAAGGAAAA 93477 .......... .......... .......... .......... .......... .......... 489 CAAAAAGGAG TAATTAAACA CTATTCTCAA AAATATCCAC ATAGAAATCA GCATTAAGTT 93537 .......... .......... .......... .......... .......... .......... 489 ATAAAATGTT TGATCCCAAA CCCAATTTTT TTATATATGG AGGACAAGTG GATGACAGAA 93597 .......... .......... .......... .......... .......... .......... 489 GGGGTGACCA GCCCTTATGA TTGTGGTGTG TGGAGATCAA TCAGGACTTT ATGGCTACTG 93657 .......... .......... .......... .......... .......... .......... 489 GTCAAAGATA GAACAAAATG TAAGGTTGGT AATGGAGAAA AAGTGGCCTT CTGGAATGAC 93717 .......... .......... .......... .......... .......... .......... 489 ATCTGGTGTG GACAGGAGAC ACTCAAACAA GCATTCCCTG AGCTACATAG TCTGAGTCAA 93777 .......... .......... .......... .......... .......... .......... 489 GCACAGGAAG CATTGGGGCA GACTTATGGA CAGGACAAGG GTGGAATTTA CATCTGAGAA 93837 .......... .......... .......... .......... .......... .......... 489 GAAACTTAAA TGACTGGGAA ATAACATCCA TAGCAAGATT TCATGACACA ATGGCTAGGG 93897 .......... .......... .......... .......... .......... .......... 489 CTACTAATCT AACAGAAGAG CAAGATAGAC TGATATGGGA AGGAGAAAGG AAGGGAGAGT 93957 .......... .......... .......... .......... .......... .......... 489 CACTGTAAGA TCTGCATATC GAGAATTGAG ACCCACTGAA GAGCAACAAG CAGGATGGCC 94017 .......... .......... .......... .......... .......... .......... 489 TTGGAGGATG ATCTGGAGAA CAAAAATCCC ATCAAGGTGA ATTATTTCAC ATGGCTTTTG 94077 .......... .......... .......... .......... .......... .......... 489 GCAAAGGAGG AAGTCTTGAC ACATGAAAAC TTGAACAGGA GGAAACACAA CCTTTGCTCT 94137 .......... .......... .......... .......... .......... .......... 489 AGATGTTATT TATGCGAAGA ACAGGTGGAG ACAGTCAACC ATCTCTTTTT GCACTGCAAA 94197 .......... .......... .......... .......... .......... .......... 489 TGGACAGATC AATTATGGCA GATGTTCATT CACAAAAGGA AGATCAAGTG GACAAAACAA 94257 .......... .......... .......... .......... .......... .......... 489 GGGATAATCA CACAAGTTCT AAAATGCTGG AACAGTGATG GAAATGCAGG AAAAGAGGAG 94317 .......... .......... .......... .......... .......... .......... 489 GAGAGATGGA GGATTGTCCT AGCATGCATT TGGTGGACAA TTTGGAATGA AAGATGTTTG 94377 .......... .......... .......... .......... .......... .......... 489 AAGGAAAGAA CAACAATATT CAGAAGATAA AGATAAACTG CCTAGATCTT TATAATTTTT 94437 .......... .......... .......... .......... .......... .......... 489 GGTGTAAGCA AGTAGTAATA AAAAATTCTG AAGAGGTTTC TAATGTTATT GACTGACTGT 94497 .......... .......... .......... .......... .......... .......... 489 AACTAGAAGA TATTAGGGCT GATGTAAGTA TAAATTTTTG GAGGGGAACT ACACTTTGAT 94557 .......... .......... .......... .......... .......... .......... 489 TTAGTATATC TATGGATATA TAGAAGTAAA TGTTACCTTT CTCAAAAAAA AAATCTCCTA 94617 .......... .......... .......... .......... .......... .......... 489 AAACCCAAAG CCAAACTCTT TTATGAAATA TGCAAAGTGA TTTGCTAACT ACAAATTGTC 94677 .......... .......... .......... .......... .......... .......... 489 CTGATGAATA TAAAAATCTT TTACCATTAT TTGGTTCTTA TAATTGGCAT TTGTGACAAT 94737 .......... .......... .......... .......... .......... .......... 489 CAATTCCACT AATTAGGACT GCACCAGTAT TTGCTTATGC TTTGCTGTTT GAAGACACCT 94797 .......... .......... .......... .......... .......... .......... 489 GGATTTATCA ATTTAGAACT ATGATGCAAA TGCTACCAGA GAAAGTTCAT TCTAACATTG 94857 .......... .......... .......... .......... .......... .......... 489 TAAATGATAT TCTCGCTGCA GGCAAATTCA ATCAACTAGT TTACAACTAT CCTA 94911 ||||||||| |||||||||| |||||||||| |||| .......... .......... .GCAAATTCA ATCAACTAGT TTACAACTAT CCTA 522 hqPGS_C08HBa0336I24.1+_SGN-E260234+ (87778 87890,87968 88147,91387 91582,94879 94911) ******************************************************************************** EST sequence 232 -strand 475 n (File: SGN-E219704-) 1 GTTTTAAAGT TTCAAAGTAC CCAAAAAATT TATCCATGAT AAGATCCAAT CCTTTTATGA 61 ATTAACTTCA AATGGTTCAT CAAAATAGAA AAAGTTAAAA GCTTTAAGAA GTAGAAAATT 121 AGTATTTCCA AAATCGAATA TGAATTTTTT TTTTACTTAA ATAGAGAGAG GGGTTAAAAT 181 AGACCCATGA ATATTTAAAG GATTCGGCAA ACTTTCCGGC AATGGAACTA TGGAAAAAAT 241 TAGATGGAGA AATTTGATAT CATGAAGAAG ATATATGCTC TAGACATATT TTCGTCCCTT 301 CTTAAATTAT GTTTGTTGAT TTATATTATT AATTTAATTT TCCCCCATAA GAAAGGGCAG 361 AGAGGAGAAA GTTGAATATA AAATTGTGGC AAGGTGGTGG TAAATGGTGG AGGAAGTGTG 421 GGAAGGAGAG AGAAGGAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAA Predicted gene structure (within gDNA segment 87410 to 91402): Exon 1 88354 88364 ( 11 n); cDNA 9 19 ( 11 n); score: 0.909 Intron 1 88365 88702 ( 338 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.78) Exon 2 88703 89156 ( 454 n); cDNA 20 472 ( 453 n); score: 0.814 MATCH C08HBa0336I24.1+ SGN-E219704- 0.814 465 0.979 C PGS_C08HBa0336I24.1+_SGN-E219704- (88354 88364,88703 89156) Alignment (genomic DNA sequence = upper lines): GTGTCAAAGT AGTGAGTTAA ATAATGACAT GTGACATATA TGTAAAAAGA AATTAATAAA 88413 || ||||||| | GTTTCAAAGT A......... .......... .......... .......... .......... 19 AAAATATATT ATGAATAAAA ACCCATTTTA AAACTATTTA ATTAATTAAA AATGTACCTT 88473 .......... .......... .......... .......... .......... .......... 19 TCAATAAAGA AGAAAAAGGG AAAAAAATGA AATCTACAAC ACCTTTATTT TTCTCCTCCA 88533 .......... .......... .......... .......... .......... .......... 19 TTTTCAGCCT TCACCATTTA CACATCTCCT CCTCCTCCAC TAACCGCTAT TACTTTGATG 88593 .......... .......... .......... .......... .......... .......... 19 CCTTCTTCTT CAAGTTTGAA GATTATCACT ACCATCATCT TTTTCTTCAA ATCTATATAA 88653 .......... .......... .......... .......... .......... .......... 19 CCAATATGGG TCATAAGCAA ATACCCATAA TCTAGCCATC ATACTATAGC CCGACAAATA 88713 | || | |||| .......... .......... .......... .......... .........C CCAAAAAAT- 29 TTATCCATGG TAAAATCAGA TTTGTTTATG AATTTACTTG AAATGTGTTC ATCAAAATAG 88773 ||||||||| ||| ||| | | |||||| |||| |||| ||||| |||| |||||||||| TTATCCATGA TAAGATCCAA TCCTTTTATG AATTAACTTC AAATG-GTTC ATCAAAATAG 88 AAAAAGTTAA AAGCTTTGAG AAGCAG-AAA TTAGTATTTC AAAAATTAAA TCTGAA-AAA 88831 |||||||||| ||||||| || ||| || ||| |||||||||| ||||| || | |||| AAAAAGTTAA AAGCTTTAAG AAGTAGAAAA TTAGTATTTC CAAAATCGAA TATGAATTTT 148 AATTA-ACTC AAATAGAGAG A--GGTGAAA GTAGACCAAC AAACATTTAA AGGATTCGGT 88888 || ||| |||||||||| | ||| ||| |||||| | || |||||| ||||||||| TTTTTTACTT AAATAGAGAG AGGGGTTAAA ATAGACCCAT GAATATTTAA AGGATTCGGC 208 AAACTTTCCG GCAATGAAAC TATAAAAAAG ATTAGATGGA AAAATTTGAT ATCATGAAGA 88948 |||||||||| |||||| ||| ||| |||| |||||||||| ||||||||| |||||||||| AAACTTTCCG GCAATGGAAC TATGGAAAAA ATTAGATGGA GAAATTTGAT ATCATGAAGA 268 AGATATATGC TCTAGACATA TTTTTTGCTC CTTTCTTAAA TTATTTTTGT TGATATATAT 89008 |||||||||| |||||||||| |||| | || | |||||||| |||| ||||| |||| ||||| AGATATATGC TCTAGACATA -TTTTCG-TC CCTTCTTAAA TTATGTTTGT TGATTTATAT 326 AATTAATTTA ATTTTCCATA TCAAGAAATG ACAAAAAGAG GAGAAAGTTG AATATACTAT 89068 ||||||||| ||||||| |||||| | | | |||| |||||||||| |||||| || TATTAATTTA ATTTTCCCCC ATAAGAAAGG GC--AGAGAG GAGAAAGTTG AATATAAAAT 384 GGTGGCAAGA TGGTGGTATA TGGAGGAGGA AGTGTGGGAA GGAGAGAGAA GGAAGAAAAA 89128 |||||||| |||||||| | ||| |||||| |||||||||| |||||||||| |||| ||||| TGTGGCAAGG TGGTGGTAAA TGGTGGAGGA AGTGTGGGAA GGAGAGAGAA GGAAAAAAAA 444 GAAATAAAAA AGTTTTAAAA TCATAAAA 89156 ||| ||||| | |||| | |||| AAAAAAAAAA AAAAAAAAAA AAAAAAAA 472 hqPGS_C08HBa0336I24.1+_SGN-E219704- (88703 89156) ******************************************************************************** EST sequence 118 -strand 611 n (File: SGN-E296361-) 1 GGTCTCTTCC AGTGAAAACG ACTGGAAAAC CTAATATCTC TTGCAAAGGA AAATGTCACG 61 AAACTGAGCA AAAACCCTGC ATTTCGAGGG AATAATAGAG GAGCAAGCAA TCATTTGAAG 121 AATGAACAGA AGTTAGACCT CACTGACACA ATCAAGGATG GAGCTCGACT TTTCATAATT 181 GACGAAGGAA TCCGCAGGCA GCTTCTTCTT GCTTTGACCG AAGACTCCAA GCTTCACATT 241 GAAGAAGTAG TTGATGTATA TAGACTGCTT GAAGACCAGG TAGATGTACC TTCAATGGCT 301 ATGGAACTAG CCCAAGACTT ACCATCCGTT GCTCGAGATA TATTGCTTTC ATGGAGTTCC 361 TCTGTATTAT CAGACAGATA GTCCCCTTCT GGATCTTGTT ACCGTGGCAC CTGTTATGTC 421 CGGCGCATAG GTGTTGAGTC CAAATCCCCT TGTCACTTCT GTTCTGCAGA TAATAAGTCT 481 TTTGGCATGT ATAAACTTGG TGCCTGCACA TCTTTTTCAC TGAATATAAG AGGAGTGATG 541 TGTTGTAAGT ATTCTTTTTG TAAGATAAAT GTTACTCCAT ATTGGACAGT AATATATTTT 601 CTATATAAAA A Predicted gene structure (within gDNA segment 96435 to 99171): Exon 1 97180 97277 ( 98 n); cDNA 1 98 ( 98 n); score: 0.990 Intron 1 97278 97384 ( 107 n); Pd: 0.979 (s: 1.00), Pa: 0.999 (s: 1.00) Exon 2 97385 97532 ( 148 n); cDNA 99 246 ( 148 n); score: 1.000 Intron 2 97533 97607 ( 75 n); Pd: 0.984 (s: 1.00), Pa: 0.999 (s: 1.00) Exon 3 97608 97677 ( 70 n); cDNA 247 316 ( 70 n); score: 1.000 Intron 3 97678 97806 ( 129 n); Pd: 0.995 (s: 1.00), Pa: 0.893 (s: 1.00) Exon 4 97807 97881 ( 75 n); cDNA 317 391 ( 75 n); score: 1.000 Intron 4 97882 98324 ( 443 n); Pd: 0.639 (s: 1.00), Pa: 0.227 (s: 1.00) Exon 5 98325 98541 ( 217 n); cDNA 392 608 ( 217 n); score: 1.000 MATCH C08HBa0336I24.1+ SGN-E296361- 0.998 608 0.995 C PGS_C08HBa0336I24.1+_SGN-E296361- (97180 97277,97385 97532,97608 97677,97807 97881,98325 98541) Alignment (genomic DNA sequence = upper lines): GGTCTCTTCC AGTGGAAACG ACTGGAAAAC CTAATATCTC TTGCAAAGGA AAATGTCACG 97239 |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTCTCTTCC AGTGAAAACG ACTGGAAAAC CTAATATCTC TTGCAAAGGA AAATGTCACG 60 AAACTGAGCA AAAACCCTGC ATTTCGAGGG AATAATAGGT ACTTCTTGGC ACTCCCTTTT 97299 |||||||||| |||||||||| |||||||||| |||||||| AAACTGAGCA AAAACCCTGC ATTTCGAGGG AATAATAG.. .......... .......... 98 TTACTGTTTG ACGTAGTATA CCTTTCGCAT TATCCTGTTC CACTATTATG TGTGACTTTT 97359 .......... .......... .......... .......... .......... .......... 98 CACATCTTCT GGTTTGTTTC TTCAGAGGAG CAAGCAATCA TTTGAAGAAT GAACAGAAGT 97419 ||||| |||||||||| |||||||||| |||||||||| .......... .......... .....AGGAG CAAGCAATCA TTTGAAGAAT GAACAGAAGT 133 TAGACCTCAC TGACACAATC AAGGATGGAG CTCGACTTTT CATAATTGAC GAAGGAATCC 97479 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGACCTCAC TGACACAATC AAGGATGGAG CTCGACTTTT CATAATTGAC GAAGGAATCC 193 GCAGGCAGCT TCTTCTTGCT TTGACCGAAG ACTCCAAGCT TCACATTGAA GAAGTATGTA 97539 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| GCAGGCAGCT TCTTCTTGCT TTGACCGAAG ACTCCAAGCT TCACATTGAA GAA....... 246 ATATCTGATT GATAGATAGT TGTCTTATGT CAGAAGATGC ACAATTCTAA TGTGATTGCC 97599 .......... .......... .......... .......... .......... .......... 246 TCTTGCAGGT AGTTGATGTA TATAGACTGC TTGAAGACCA GGTAGATGTA CCTTCAATGG 97659 || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ........GT AGTTGATGTA TATAGACTGC TTGAAGACCA GGTAGATGTA CCTTCAATGG 298 CTATGGAACT AGCCCAAGGT ACACTTTTTA TTTTCATAGA GTCTACACTT CCATTTTTCA 97719 |||||||||| |||||||| CTATGGAACT AGCCCAAG.. .......... .......... .......... .......... 316 TAGTCTTACG TCCAGTTAAA TAGGTAGATC AAACATTTCA TAATATATGA TTGATCATGA 97779 .......... .......... .......... .......... .......... .......... 316 GCTTTACATG TCTTAAAAAA TTTTCAGACT TACCATCCGT TGCTCGAGAT ATATTGCTTT 97839 ||| |||||||||| |||||||||| |||||||||| .......... .......... .......ACT TACCATCCGT TGCTCGAGAT ATATTGCTTT 349 CATGGAGTTC CTCTGTATTA TCAGACAGAT AGTCCCCTTC TGGTGCATTC CTCGACCAAT 97899 |||||||||| |||||||||| |||||||||| |||||||||| || CATGGAGTTC CTCTGTATTA TCAGACAGAT AGTCCCCTTC TG........ .......... 391 GATATTTCAA TCTGTTATCA TGATGTAAAG TTGAGTTCTC CCTCGCCCCT TCCCCCTTCT 97959 .......... .......... .......... .......... .......... .......... 391 TTCCCTTTAT TTCTTCGGCT CTTGATCACA TTTTTCCCAT GGGATCAAGG TGCAATCTAG 98019 .......... .......... .......... .......... .......... .......... 391 AATCTGCAAA GTCTTGGGTG AATATATTTG TATAGTATAT GGTGAAGCGG TAAAGAGATG 98079 .......... .......... .......... .......... .......... .......... 391 AAAGTAGTGT AAAATGAGAA ATTCATGTCA ATAGCACACA TTTCCACAGG TATGATGCAA 98139 .......... .......... .......... .......... .......... .......... 391 CAAACCTATA GAAAAGATAG CATCATGTAT AGCAGTGATT CTCATACAGT TCTTGTTTGC 98199 .......... .......... .......... .......... .......... .......... 391 TGAAAACATA TTTCCCTAAC TTTAACATAC AATTGGTTTC TACTTGTGGA CATTCAGAAA 98259 .......... .......... .......... .......... .......... .......... 391 TCGAACCCTT ATTGTTCTTG ATTTTATTGT CTGAAATGCC CATTGCAATG TCAATCATTG 98319 .......... .......... .......... .......... .......... .......... 391 AGCAGGATCT TGTTACCGTG GCACCTGTTA TGTCCGGCGC ATAGGTGTTG AGTCCAAATC 98379 ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| .....GATCT TGTTACCGTG GCACCTGTTA TGTCCGGCGC ATAGGTGTTG AGTCCAAATC 446 CCCTTGTCAC TTCTGTTCTG CAGATAATAA GTCTTTTGGC ATGTATAAAC TTGGTGCCTG 98439 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCTTGTCAC TTCTGTTCTG CAGATAATAA GTCTTTTGGC ATGTATAAAC TTGGTGCCTG 506 CACATCTTTT TCACTGAATA TAAGAGGAGT GATGTGTTGT AAGTATTCTT TTTGTAAGAT 98499 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACATCTTTT TCACTGAATA TAAGAGGAGT GATGTGTTGT AAGTATTCTT TTTGTAAGAT 566 AAATGTTACT CCATATTGGA CAGTAATATA TTTTCTATAT AA 98541 |||||||||| |||||||||| |||||||||| |||||||||| || AAATGTTACT CCATATTGGA CAGTAATATA TTTTCTATAT AA 608 hqPGS_C08HBa0336I24.1+_SGN-E296361- (97180 97277,97385 97532,97608 97677,97807 97881,98325 98541) ******************************************************************************** EST sequence 119 -strand 611 n (File: SGN-E296501-) 1 GGTCTCTTCC AGTGAAAACG ACTGGAAAAC CTAATATCTC TTGCAAAGGA AAATGTCACG 61 AAACTGAGCA AAAACCCTGC ATTTCGAGGG AATAATAGAG GAGCAAGCAA TCATTTGAAG 121 AATGAACAGA AGTTAGACCT CACTGACACA ATCAAGGATG GAGCTCGACT TTTCATAATT 181 GACGAAGGAA TCCGCAGGCA GCTTCTTCTT GCTTTGACCG AAGACTCCAA GCTTCACATT 241 GAAGAAGTAG TTGATGTATA TAGACTGCTT GAAGACCAGG TAGATGTACC TTCAATGGCT 301 ATGGAACTAG CCCAAGACTT ACCATCCGTT GCTCGAGATA TATTGCTTTC ATGGAGTTCC 361 TCTGTATTAT CAGACAGATA GTCCCCTTCT GGATCTTGTT ACCGTGGCAC CTGTTATGTC 421 CGGCGCATAG GTGTTGAGTC CAAATCCCCT TGTCACTTCT GTTCTGCAGA TAATAAGTCT 481 TTTGGCATGT ATAAACTTGG TGCCTGCACA TCTTTTTCAC TGAATATAAG AGGAGTGATG 541 TGTTGTAAGT ATTCTTTTTG TAAGATAAAT GTTACTCCAT ATTGGACAGT AATATATTTT 601 CTATATAAAA A Predicted gene structure (within gDNA segment 96435 to 99171): Exon 1 97180 97277 ( 98 n); cDNA 1 98 ( 98 n); score: 0.990 Intron 1 97278 97384 ( 107 n); Pd: 0.979 (s: 1.00), Pa: 0.999 (s: 1.00) Exon 2 97385 97532 ( 148 n); cDNA 99 246 ( 148 n); score: 1.000 Intron 2 97533 97607 ( 75 n); Pd: 0.984 (s: 1.00), Pa: 0.999 (s: 1.00) Exon 3 97608 97677 ( 70 n); cDNA 247 316 ( 70 n); score: 1.000 Intron 3 97678 97806 ( 129 n); Pd: 0.995 (s: 1.00), Pa: 0.893 (s: 1.00) Exon 4 97807 97881 ( 75 n); cDNA 317 391 ( 75 n); score: 1.000 Intron 4 97882 98324 ( 443 n); Pd: 0.639 (s: 1.00), Pa: 0.227 (s: 1.00) Exon 5 98325 98541 ( 217 n); cDNA 392 608 ( 217 n); score: 1.000 MATCH C08HBa0336I24.1+ SGN-E296501- 0.998 608 0.995 C PGS_C08HBa0336I24.1+_SGN-E296501- (97180 97277,97385 97532,97608 97677,97807 97881,98325 98541) Alignment (genomic DNA sequence = upper lines): GGTCTCTTCC AGTGGAAACG ACTGGAAAAC CTAATATCTC TTGCAAAGGA AAATGTCACG 97239 |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTCTCTTCC AGTGAAAACG ACTGGAAAAC CTAATATCTC TTGCAAAGGA AAATGTCACG 60 AAACTGAGCA AAAACCCTGC ATTTCGAGGG AATAATAGGT ACTTCTTGGC ACTCCCTTTT 97299 |||||||||| |||||||||| |||||||||| |||||||| AAACTGAGCA AAAACCCTGC ATTTCGAGGG AATAATAG.. .......... .......... 98 TTACTGTTTG ACGTAGTATA CCTTTCGCAT TATCCTGTTC CACTATTATG TGTGACTTTT 97359 .......... .......... .......... .......... .......... .......... 98 CACATCTTCT GGTTTGTTTC TTCAGAGGAG CAAGCAATCA TTTGAAGAAT GAACAGAAGT 97419 ||||| |||||||||| |||||||||| |||||||||| .......... .......... .....AGGAG CAAGCAATCA TTTGAAGAAT GAACAGAAGT 133 TAGACCTCAC TGACACAATC AAGGATGGAG CTCGACTTTT CATAATTGAC GAAGGAATCC 97479 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGACCTCAC TGACACAATC AAGGATGGAG CTCGACTTTT CATAATTGAC GAAGGAATCC 193 GCAGGCAGCT TCTTCTTGCT TTGACCGAAG ACTCCAAGCT TCACATTGAA GAAGTATGTA 97539 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| GCAGGCAGCT TCTTCTTGCT TTGACCGAAG ACTCCAAGCT TCACATTGAA GAA....... 246 ATATCTGATT GATAGATAGT TGTCTTATGT CAGAAGATGC ACAATTCTAA TGTGATTGCC 97599 .......... .......... .......... .......... .......... .......... 246 TCTTGCAGGT AGTTGATGTA TATAGACTGC TTGAAGACCA GGTAGATGTA CCTTCAATGG 97659 || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ........GT AGTTGATGTA TATAGACTGC TTGAAGACCA GGTAGATGTA CCTTCAATGG 298 CTATGGAACT AGCCCAAGGT ACACTTTTTA TTTTCATAGA GTCTACACTT CCATTTTTCA 97719 |||||||||| |||||||| CTATGGAACT AGCCCAAG.. .......... .......... .......... .......... 316 TAGTCTTACG TCCAGTTAAA TAGGTAGATC AAACATTTCA TAATATATGA TTGATCATGA 97779 .......... .......... .......... .......... .......... .......... 316 GCTTTACATG TCTTAAAAAA TTTTCAGACT TACCATCCGT TGCTCGAGAT ATATTGCTTT 97839 ||| |||||||||| |||||||||| |||||||||| .......... .......... .......ACT TACCATCCGT TGCTCGAGAT ATATTGCTTT 349 CATGGAGTTC CTCTGTATTA TCAGACAGAT AGTCCCCTTC TGGTGCATTC CTCGACCAAT 97899 |||||||||| |||||||||| |||||||||| |||||||||| || CATGGAGTTC CTCTGTATTA TCAGACAGAT AGTCCCCTTC TG........ .......... 391 GATATTTCAA TCTGTTATCA TGATGTAAAG TTGAGTTCTC CCTCGCCCCT TCCCCCTTCT 97959 .......... .......... .......... .......... .......... .......... 391 TTCCCTTTAT TTCTTCGGCT CTTGATCACA TTTTTCCCAT GGGATCAAGG TGCAATCTAG 98019 .......... .......... .......... .......... .......... .......... 391 AATCTGCAAA GTCTTGGGTG AATATATTTG TATAGTATAT GGTGAAGCGG TAAAGAGATG 98079 .......... .......... .......... .......... .......... .......... 391 AAAGTAGTGT AAAATGAGAA ATTCATGTCA ATAGCACACA TTTCCACAGG TATGATGCAA 98139 .......... .......... .......... .......... .......... .......... 391 CAAACCTATA GAAAAGATAG CATCATGTAT AGCAGTGATT CTCATACAGT TCTTGTTTGC 98199 .......... .......... .......... .......... .......... .......... 391 TGAAAACATA TTTCCCTAAC TTTAACATAC AATTGGTTTC TACTTGTGGA CATTCAGAAA 98259 .......... .......... .......... .......... .......... .......... 391 TCGAACCCTT ATTGTTCTTG ATTTTATTGT CTGAAATGCC CATTGCAATG TCAATCATTG 98319 .......... .......... .......... .......... .......... .......... 391 AGCAGGATCT TGTTACCGTG GCACCTGTTA TGTCCGGCGC ATAGGTGTTG AGTCCAAATC 98379 ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| .....GATCT TGTTACCGTG GCACCTGTTA TGTCCGGCGC ATAGGTGTTG AGTCCAAATC 446 CCCTTGTCAC TTCTGTTCTG CAGATAATAA GTCTTTTGGC ATGTATAAAC TTGGTGCCTG 98439 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCTTGTCAC TTCTGTTCTG CAGATAATAA GTCTTTTGGC ATGTATAAAC TTGGTGCCTG 506 CACATCTTTT TCACTGAATA TAAGAGGAGT GATGTGTTGT AAGTATTCTT TTTGTAAGAT 98499 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACATCTTTT TCACTGAATA TAAGAGGAGT GATGTGTTGT AAGTATTCTT TTTGTAAGAT 566 AAATGTTACT CCATATTGGA CAGTAATATA TTTTCTATAT AA 98541 |||||||||| |||||||||| |||||||||| |||||||||| || AAATGTTACT CCATATTGGA CAGTAATATA TTTTCTATAT AA 608 hqPGS_C08HBa0336I24.1+_SGN-E296501- (97180 97277,97385 97532,97608 97677,97807 97881,98325 98541) ******************************************************************************** EST sequence 331 -strand 679 n (File: SGN-E369702-) 1 CAAAGGAAAA TGTCACGAAA CTGAGCAAAA ACCCTGCATT TCGAGGGAAT AATAGAGGAG 61 CAAGCAATCA TTTGAAGAAT GAACAGAAGT TAGACCTCAC TGACACAATC AAGGATGGAG 121 CTCGACTTTT CATAATTGAC GAAGGAATCC GCAGGCAGCT TCTTCTTGCT TTGACCGAAG 181 ACTCCAAGCT TCACATTGAA GAAGTAGTTG ATGTATATAG ACTGCTTGAA GACCAGGTAG 241 ATGTACCTTC AATGGCTATG GAACTAGCCC AAGACTTACC ATCCGTTGCT CGAGATATAT 301 TGCTTTCATG GAGTTCCTCT GTATTATCAG ACAGATAGTC CCCTTTTGGT GCATTCCTCG 361 ACCAATGATA TTTCAATCTG TTATCATGAT GTAAAGTTGA GTTCTCCCTC GCCCCTTCCC 421 CCTTCTTTCC CTTTATTTCT TCGGCTCTTG ATCACATTTT TCCCATGGGA TCAAGGTGCA 481 ATCTAGAATC TGCAAAGTCT TGGGTGAATA TATTTGTATA GTATATGGTG AAGCGGTAAA 541 GAGATGAAAG TAGTGTAAAA TGAGAAATTC ATGTCAATAG CACACATTTC CACAGGTATG 601 ATGCAACAAA CCTATAGAAA AGATAGCATC ATGTATAGCA GTGATTCTCA TACAGTTCTT 661 GTTTGCTAAA AAAAAAAAA Predicted gene structure (within gDNA segment 96613 to 98920): Exon 1 97223 97277 ( 55 n); cDNA 1 55 ( 55 n); score: 1.000 Intron 1 97278 97384 ( 107 n); Pd: 0.979 (s: 1.00), Pa: 0.999 (s: 1.00) Exon 2 97385 97532 ( 148 n); cDNA 56 203 ( 148 n); score: 1.000 Intron 2 97533 97607 ( 75 n); Pd: 0.984 (s: 1.00), Pa: 0.999 (s: 1.00) Exon 3 97608 97677 ( 70 n); cDNA 204 273 ( 70 n); score: 1.000 Intron 3 97678 97806 ( 129 n); Pd: 0.995 (s: 1.00), Pa: 0.893 (s: 1.00) Exon 4 97807 98205 ( 399 n); cDNA 274 672 ( 399 n); score: 0.995 MATCH C08HBa0336I24.1+ SGN-E369702- 0.997 672 0.990 C PGS_C08HBa0336I24.1+_SGN-E369702- (97223 97277,97385 97532,97608 97677,97807 98205) Alignment (genomic DNA sequence = upper lines): CAAAGGAAAA TGTCACGAAA CTGAGCAAAA ACCCTGCATT TCGAGGGAAT AATAGGTACT 97282 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| CAAAGGAAAA TGTCACGAAA CTGAGCAAAA ACCCTGCATT TCGAGGGAAT AATAG..... 55 TCTTGGCACT CCCTTTTTTA CTGTTTGACG TAGTATACCT TTCGCATTAT CCTGTTCCAC 97342 .......... .......... .......... .......... .......... .......... 55 TATTATGTGT GACTTTTCAC ATCTTCTGGT TTGTTTCTTC AGAGGAGCAA GCAATCATTT 97402 |||||||| |||||||||| .......... .......... .......... .......... ..AGGAGCAA GCAATCATTT 73 GAAGAATGAA CAGAAGTTAG ACCTCACTGA CACAATCAAG GATGGAGCTC GACTTTTCAT 97462 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGAATGAA CAGAAGTTAG ACCTCACTGA CACAATCAAG GATGGAGCTC GACTTTTCAT 133 AATTGACGAA GGAATCCGCA GGCAGCTTCT TCTTGCTTTG ACCGAAGACT CCAAGCTTCA 97522 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTGACGAA GGAATCCGCA GGCAGCTTCT TCTTGCTTTG ACCGAAGACT CCAAGCTTCA 193 CATTGAAGAA GTATGTAATA TCTGATTGAT AGATAGTTGT CTTATGTCAG AAGATGCACA 97582 |||||||||| CATTGAAGAA .......... .......... .......... .......... .......... 203 ATTCTAATGT GATTGCCTCT TGCAGGTAGT TGATGTATAT AGACTGCTTG AAGACCAGGT 97642 ||||| |||||||||| |||||||||| |||||||||| .......... .......... .....GTAGT TGATGTATAT AGACTGCTTG AAGACCAGGT 238 AGATGTACCT TCAATGGCTA TGGAACTAGC CCAAGGTACA CTTTTTATTT TCATAGAGTC 97702 |||||||||| |||||||||| |||||||||| ||||| AGATGTACCT TCAATGGCTA TGGAACTAGC CCAAG..... .......... .......... 273 TACACTTCCA TTTTTCATAG TCTTACGTCC AGTTAAATAG GTAGATCAAA CATTTCATAA 97762 .......... .......... .......... .......... .......... .......... 273 TATATGATTG ATCATGAGCT TTACATGTCT TAAAAAATTT TCAGACTTAC CATCCGTTGC 97822 |||||| |||||||||| .......... .......... .......... .......... ....ACTTAC CATCCGTTGC 289 TCGAGATATA TTGCTTTCAT GGAGTTCCTC TGTATTATCA GACAGATAGT CCCCTTCTGG 97882 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| TCGAGATATA TTGCTTTCAT GGAGTTCCTC TGTATTATCA GACAGATAGT CCCCTTTTGG 349 TGCATTCCTC GACCAATGAT ATTTCAATCT GTTATCATGA TGTAAAGTTG AGTTCTCCCT 97942 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCATTCCTC GACCAATGAT ATTTCAATCT GTTATCATGA TGTAAAGTTG AGTTCTCCCT 409 CGCCCCTTCC CCCTTCTTTC CCTTTATTTC TTCGGCTCTT GATCACATTT TTCCCATGGG 98002 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCCCCTTCC CCCTTCTTTC CCTTTATTTC TTCGGCTCTT GATCACATTT TTCCCATGGG 469 ATCAAGGTGC AATCTAGAAT CTGCAAAGTC TTGGGTGAAT ATATTTGTAT AGTATATGGT 98062 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCAAGGTGC AATCTAGAAT CTGCAAAGTC TTGGGTGAAT ATATTTGTAT AGTATATGGT 529 GAAGCGGTAA AGAGATGAAA GTAGTGTAAA ATGAGAAATT CATGTCAATA GCACACATTT 98122 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGCGGTAA AGAGATGAAA GTAGTGTAAA ATGAGAAATT CATGTCAATA GCACACATTT 589 CCACAGGTAT GATGCAACAA ACCTATAGAA AAGATAGCAT CATGTATAGC AGTGATTCTC 98182 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCACAGGTAT GATGCAACAA ACCTATAGAA AAGATAGCAT CATGTATAGC AGTGATTCTC 649 ATACAGTTCT TGTTTGCTGA AAA 98205 |||||||||| |||||||| | ||| ATACAGTTCT TGTTTGCTAA AAA 672 hqPGS_C08HBa0336I24.1+_SGN-E369702- (97223 97277,97385 97532,97608 97677,97807 98205) ******************************************************************************** EST sequence 29 -strand 847 n (File: SGN-E540531-) 1 GACATAGCAA CTGGGTAAAG GCTGAAGCTG CGCTTTCTGA AGCATTGAAC GAGCATGGGA 61 AGCCCTGGGA GATCAATGAA GGAGACGGAG CATTTTATGG CCCAAAAATT GATATAAGTG 121 TTTCTGATGC AATGAAGAGG AAATTCCAGT GTGCGACATT GCAGCTTGAT TTCCAACTCC 181 CTCAACGTTT CAACCTATCA TACTCAGCAG AAGATGAAAG TAAGAGAGAG AGACCAGTTA 241 TGATACATAG AGCGATCCTT GGGTCAGTTG AGCGTATGTT CGCCATTCTT TTGGAGCATT 301 TCAAAGGGAA ATGGCCTTTC TGGCTTAGTC CACGTCAAGC TATGGTCTGC CCTGTTTCTG 361 ACAAATCGCA GTCATATGCA CTTAAGCTCC GGGAGCAGAT ACATGATGCT GGTTATTACG 421 TTGATGTTGA TACAAGTGAC AGGACAATTC AGAAAAAGGT ACGAGAGGCT CAAGTGGCAC 481 AATATAACTA TATTCTGGTT GTTGGAGAGG CTGAAGCCAG TAGTGGGCAG GTGAGTGTTC 541 GAGTGAGAGA CAAACCTGAT CATCAAGTCA TGACGGTTGA CGTTCTCCTT GCTCAGTTCA 601 AAGATATGGT TGCATCATTT CAGTAAGAGT CGCCACTTCT CTTGCATTAT ATCCCCGAGG 661 GCTCTGGTGA GCGCAGCACT CTAGACTCAC GGACATGGGT TTGAAACCTT GCCGCAGAAG 721 AACGAACTGT TAATATTTTG ATCCATTGTA GCTATTACAT TATAAATTCA CTAGGATACC 781 TTTTGACTTG AATGGTTTTC AATAGCNATG TTAGCATCTT ATTCTTTCTT CTAAAAAAAA 841 AAAAAAA Predicted gene structure (within gDNA segment 106996 to 101055): Exon 1 106288 106217 ( 72 n); cDNA 1 71 ( 71 n); score: 0.972 Intron 1 106216 105727 ( 490 n); Pd: 0.998 (s: 0.98), Pa: 0.948 (s: 1.00) Exon 2 105726 105634 ( 93 n); cDNA 72 164 ( 93 n); score: 1.000 Intron 2 105633 105487 ( 147 n); Pd: 0.990 (s: 1.00), Pa: 0.992 (s: 1.00) Exon 3 105486 105265 ( 222 n); cDNA 165 386 ( 222 n); score: 1.000 Intron 3 105264 104141 (1124 n); Pd: 0.999 (s: 1.00), Pa: 0.991 (s: 1.00) Exon 4 104140 104069 ( 72 n); cDNA 387 458 ( 72 n); score: 1.000 Intron 4 104068 103051 (1018 n); Pd: 0.988 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 5 103050 102979 ( 72 n); cDNA 459 530 ( 72 n); score: 1.000 Intron 5 102978 102088 ( 891 n); Pd: 0.974 (s: 1.00), Pa: 0.999 (s: 1.00) Exon 6 102087 101786 ( 302 n); cDNA 531 833 ( 303 n); score: 0.992 PPA cDNA 834 847 MATCH C08HBa0336I24.1- SGN-E540531- 0.995 833 0.983 C PGS_C08HBa0336I24.1-_SGN-E540531- (106288 106217,105726 105634,105486 105265,104140 104069,103050 102979,102087 101786) Alignment (genomic DNA sequence = upper lines): GACATAGCAA CTTGGGTAAA GGCTGAAGCT GCTCTTTCTG AAGCATTGAA CGAGCATGGG 106229 |||||||||| | |||||||| |||||||||| || ||||||| |||||||||| |||||||||| GACATAGCAA C-TGGGTAAA GGCTGAAGCT GCGCTTTCTG AAGCATTGAA CGAGCATGGG 59 AAGCCCTGGG AGGTTTGCTA TCAATTTTGT TGGATTTTAA AATGTGAAGT TGTCAGACTG 106169 |||||||||| || AAGCCCTGGG AG........ .......... .......... .......... .......... 71 TTCTACATTT AAAATGACTG GACTCCCTTT TTGCCGATTA AAAAACATTT GATTTACTCC 106109 .......... .......... .......... .......... .......... .......... 71 TATTTTTGGT GCTTCTATTT TTATTCATCC CAATTTATGT GTCGACTCAC TCAATCAATT 106049 .......... .......... .......... .......... .......... .......... 71 TTCTTTTTTA GAAAATCTTC ATTTAAAAAT TACGTCAGAT CTCTTAATAC TGGCACCATT 105989 .......... .......... .......... .......... .......... .......... 71 CTACTTGTTT TACGTGAACA CTATTTAAGC TAATATCTTA GACTCCTTGA ACAATCAAAT 105929 .......... .......... .......... .......... .......... .......... 71 GTTGTAGTAT AGAATGAGAT GTAGGGAGTA CCTTTTTCGT GTTACCTGAC AGAAAAAGTG 105869 .......... .......... .......... .......... .......... .......... 71 AGGATTGGGG TTGCTCCTCT TGCAATGTTC CTGTTTATCT ATGGAAAATT AGGTAGTCCC 105809 .......... .......... .......... .......... .......... .......... 71 CGCGTATCAG TGTTTTTTTG GTTATTTTGT TTTCTTAATC TCTTTTATCT TGCCTTTTAA 105749 .......... .......... .......... .......... .......... .......... 71 TTAAAGAATC TCATTCAATT AGATCAATGA AGGAGACGGA GCATTTTATG GCCCAAAAAT 105689 |||||||| |||||||||| |||||||||| |||||||||| .......... .......... ..ATCAATGA AGGAGACGGA GCATTTTATG GCCCAAAAAT 109 TGATATAAGT GTTTCTGATG CAATGAAGAG GAAATTCCAG TGTGCGACAT TGCAGGTCAT 105629 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| TGATATAAGT GTTTCTGATG CAATGAAGAG GAAATTCCAG TGTGCGACAT TGCAG..... 164 ATTTGTTCCT ATTCTCCTTG GTTCATTTTC ACAAACAATA TCATTCTTTA CCTTTGAAAT 105569 .......... .......... .......... .......... .......... .......... 164 TCACCTACCT TGAAATTGTT CTCATGTTCT TTTGTACCTT ATTGGAAGTA TCATCTGAAA 105509 .......... .......... .......... .......... .......... .......... 164 TTCTGAATGC TGTGTTTTTC AGCTTGATTT CCAACTCCCT CAACGTTTCA ACCTATCATA 105449 |||||||| |||||||||| |||||||||| |||||||||| .......... .......... ..CTTGATTT CCAACTCCCT CAACGTTTCA ACCTATCATA 202 CTCAGCAGAA GATGAAAGTA AGAGAGAGAG ACCAGTTATG ATACATAGAG CGATCCTTGG 105389 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCAGCAGAA GATGAAAGTA AGAGAGAGAG ACCAGTTATG ATACATAGAG CGATCCTTGG 262 GTCAGTTGAG CGTATGTTCG CCATTCTTTT GGAGCATTTC AAAGGGAAAT GGCCTTTCTG 105329 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCAGTTGAG CGTATGTTCG CCATTCTTTT GGAGCATTTC AAAGGGAAAT GGCCTTTCTG 322 GCTTAGTCCA CGTCAAGCTA TGGTCTGCCC TGTTTCTGAC AAATCGCAGT CATATGCACT 105269 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTTAGTCCA CGTCAAGCTA TGGTCTGCCC TGTTTCTGAC AAATCGCAGT CATATGCACT 382 TAAGGTTAGT TACATTTACG AACTTTCTCC TATTGATGTA TTAATGTTTT AACTATTTAA 105209 |||| TAAG...... .......... .......... .......... .......... .......... 386 AGACTCCCTT CTCTGAATCC TTTCTGTGCA TCTGATTGGA TGATATTCCT TAGATTTTTT 105149 .......... .......... .......... .......... .......... .......... 386 TAATTTTGGT GTAATGTTAT TACTGTTGGG CATGTCTCGT TCTTTTTATT CAACTCAAAG 105089 .......... .......... .......... .......... .......... .......... 386 GGTACTCATG GTAGTTAGCG TTAGTTTTTC TTCTCTTATT TCTTTTCGTT CTTTATAGTA 105029 .......... .......... .......... .......... .......... .......... 386 AGTAGTGTGA TTTGTTGATG CCTTTTTTTA ATAACTAGGT ATGTTGTTTT ACTAATTAAA 104969 .......... .......... .......... .......... .......... .......... 386 AGTACCAAGA AGGTACAACA TAAGTAAAGC AAGAGAAGTT TATTGTTGAT ACCTGTAGAT 104909 .......... .......... .......... .......... .......... .......... 386 TTAAACTTCA ATTTGTTAGT TACTAAGTAG GCTGGATGTA TGTAATTTCT CAAACACAGT 104849 .......... .......... .......... .......... .......... .......... 386 AACATGGTTG TACAGATAGA ATCTTTGAGG GGTAAAAAAT ACAATATAGG ATTTTGTGTT 104789 .......... .......... .......... .......... .......... .......... 386 GACGTCTGCA ATTGCACTGT TGGTGTTGCC TTCAAAGCAT GAAACAGGGT TTAGAAGTGC 104729 .......... .......... .......... .......... .......... .......... 386 TGTAGATTGT GCAGTTACAG ATTTTGAGAA AATAATTATA GGATTTTTTT GTTGGCATCT 104669 .......... .......... .......... .......... .......... .......... 386 ACAATTGCAC TGGTTGGTGT TGTCTGCAAA TCATGAAGAG TGATTGTGAA GTTCTTTGAA 104609 .......... .......... .......... .......... .......... .......... 386 TTCACAGAGT TGGTAGAACC TGCATACATG TAATTATTGA AGATGCTGAG TAGAGAAGTT 104549 .......... .......... .......... .......... .......... .......... 386 GGGCAGTTGA TAGGGAAGGG TAGCTTTTTG GCTCAGCTCC CATATTTTGC CAACTTCCTC 104489 .......... .......... .......... .......... .......... .......... 386 GACAGGAAGA TAAAGAAATG TATGTTGTTG AGGATTATTG GAGCCCCAAT AGGTCATGAT 104429 .......... .......... .......... .......... .......... .......... 386 CACTGTATAT GTATCCTGCA GGGCACATAT AGTTTTTTTA GTAAGACCAC ATTTTTTTTG 104369 .......... .......... .......... .......... .......... .......... 386 TTGATTTAAG TCTATTTTGA AGAATACGTG TGAAACACCT TCACCCATGT GATGCGTTGC 104309 .......... .......... .......... .......... .......... .......... 386 AATGGAGGTA CGTCCATGTA AAAAAGGACA TAATATAAAA AAGTCAACTT GCCGATTGAG 104249 .......... .......... .......... .......... .......... .......... 386 AAAACATAAA TATGCTGAGT TTATTTACCA AATATGCTTT CGTGAATAAT TTTGTGTACT 104189 .......... .......... .......... .......... .......... .......... 386 TAATCCATTG TGAAAATTGC TTTAACGTGT TGCTCTTCTT TTATTCAGCT CCGGGAGCAG 104129 || |||||||||| .......... .......... .......... .......... ........CT CCGGGAGCAG 398 ATACATGATG CTGGTTATTA CGTTGATGTT GATACAAGTG ACAGGACAAT TCAGAAAAAG 104069 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATACATGATG CTGGTTATTA CGTTGATGTT GATACAAGTG ACAGGACAAT TCAGAAAAAG 458 GTTAGATTCT TATTGTAGTA TATCATGTAA AATGCATGAT TGGTTCACTT TATGAGGGTC 104009 .......... .......... .......... .......... .......... .......... 458 ACTAGCATTT TTCCTATATG ATCTCATTAT AGTTTACAGT AACATTTAGG GGTCCAAGGA 103949 .......... .......... .......... .......... .......... .......... 458 CCAAGTACAG TGAGTTCCTC TGTTTTCTGG GGGAAGTTTA TCTTACAGAA GGAAATAAGG 103889 .......... .......... .......... .......... .......... .......... 458 GTCCATTTGT AATAGTTACT CCATAAGACC TGGCAAGTTA TGATCAAAAA GGGTCCACCA 103829 .......... .......... .......... .......... .......... .......... 458 GTTATGTCAC TTAACCTCAC CAATCTGTGC AGAGCACTAT TGAAATCATT AGGATGGTCA 103769 .......... .......... .......... .......... .......... .......... 458 ATATGATCGT ATAATTGGTC ATGGGGAAAA TATCATAGTG CCCTACAGAT TTGTGTTCAT 103709 .......... .......... .......... .......... .......... .......... 458 TTCAGCAATG GACAAATTTT ATCAATTTTT CCATTTAAGT TTATAAACCT ATATCTATGT 103649 .......... .......... .......... .......... .......... .......... 458 GAAAACTCAC CTATGCAGTG TGACATAGTT TAGGTCATTT TACCATTTAG TCCATGACAT 103589 .......... .......... .......... .......... .......... .......... 458 AAGAGATCAA ATCCTTTTTA ACTGTGACCA TTATGGTTTG TACGCCATTT TGTTGAGGTT 103529 .......... .......... .......... .......... .......... .......... 458 GTATTAATAT ATCAACATAT GTCAATTGTG CTTACCTACT TTGTGACTGG ATACTAACAT 103469 .......... .......... .......... .......... .......... .......... 458 ACAAAGGATT GGCAAAAATT GCCATTCTCT TGAAGCCAGA TGTTGCTTAG ACAAATTCAA 103409 .......... .......... .......... .......... .......... .......... 458 GAGAAATGCA GTCTATTTCT CAAGTAAAAA AAGGGACTGA AATTTTCTTG AATTAGTTAA 103349 .......... .......... .......... .......... .......... .......... 458 GTAACATCTG GCTTCAGAAA GCAACCAGAC AAATTAACTA GTCGACTGAA AAATTGGAAA 103289 .......... .......... .......... .......... .......... .......... 458 ATAGGATGTA AAGTCCGTCC ACAAAATAAT TGGTAAAACC TGAAATCTGT CATGTATCTG 103229 .......... .......... .......... .......... .......... .......... 458 CTCTTGTACT CTGAAGAGCA CATGATTGCA AATGGTATTA CGTAATGCTT TCAGTTTTTG 103169 .......... .......... .......... .......... .......... .......... 458 AAGCTACGCA CTTGATGATC CGATAAATTT TTCTCTCAAG TAATACAAGT TAAGTCTCAA 103109 .......... .......... .......... .......... .......... .......... 458 GTTGAAAACT TTTGTTGGTC TGTTAAACGA TTGCTTGTGG CTTTTAATGT ATATGCAGGT 103049 || .......... .......... .......... .......... .......... ........GT 460 ACGAGAGGCT CAAGTGGCAC AATATAACTA TATTCTGGTT GTTGGAGAGG CTGAAGCCAG 102989 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACGAGAGGCT CAAGTGGCAC AATATAACTA TATTCTGGTT GTTGGAGAGG CTGAAGCCAG 520 TAGTGGGCAG GTATCTTATT TCCCCCCAAC CTTCACTGCT TTTCCCCACA GCCTGCATTG 102929 |||||||||| TAGTGGGCAG .......... .......... .......... .......... .......... 530 CTGTATCTCT TTTTAAAATG TGCAATTGAA CAAACTAAAA AAAATATTCT GTATCACTTT 102869 .......... .......... .......... .......... .......... .......... 530 GGTTCAGCTC ATCAGCTTTC TAAGGTTCTG AAATAACCTT TGTCAAGAAA AGGTTCTGGC 102809 .......... .......... .......... .......... .......... .......... 530 TGATAATTAA CTTCTTGTAT GTACTGTTGT TTTGTATTGA TTGAGATATT TTGTGGGTCA 102749 .......... .......... .......... .......... .......... .......... 530 CTTGTTTGAT TTCTTCTTGT TCCTCTTCTT CCAACTCCTA TTATTGATAA AGATGTATAT 102689 .......... .......... .......... .......... .......... .......... 530 TATGCTAAAC TTTCTGCAAA TTACTGATTT GTCTCTATCC CACCCCGTGT GAAGAACTAG 102629 .......... .......... .......... .......... .......... .......... 530 AAAGAAAGGG CTTCCAGCAT GATTTGTGGG GGTTCATTGA CAAATTCTCT TACAGTAGCC 102569 .......... .......... .......... .......... .......... .......... 530 CTGGTAACAG AGATGTTTTA GGAACAAAAT CTCTTATGAT ATCACCTATA CGGTGTCTTC 102509 .......... .......... .......... .......... .......... .......... 530 AGTAGCAGCT AAACAATTGA AAGTAATTGA AACTGAATAT TTCCCACCAA AAGATCAGTC 102449 .......... .......... .......... .......... .......... .......... 530 CCATTATAAC ATTCACATGA AGGAGCTTTG AGAATGTCAA AACCATTTGA TAGATTTAGT 102389 .......... .......... .......... .......... .......... .......... 530 AGCCAATCAG ATCACCTATG GCTGGATAAT TCTGACTTTA CTAGGCAAGA TGTTTCTGCT 102329 .......... .......... .......... .......... .......... .......... 530 TAGCTGGTGA TTGATTTGTT TGGGAAAAAA ATGTCTTATT TTGCTGGTTT GATGGGGTGC 102269 .......... .......... .......... .......... .......... .......... 530 CCATCAACTT TTGGTTGTCA TTCCAAATAC TCTGCTTAGT GATGTTTTTG GTTGTCAGTT 102209 .......... .......... .......... .......... .......... .......... 530 TCCTAGGTTC ATGCCTCCAC ATATGATTTT CTTGTCTTCT CATTTCAAAT CTTGTAGCCA 102149 .......... .......... .......... .......... .......... .......... 530 AGTTTTACTG CTTTTTATTT TTGCTGAAAA ATATGGTCTC TCTGTATGTG AATGATTCTA 102089 .......... .......... .......... .......... .......... .......... 530 GGTGAGTGTT CGAGTGAGAG ACAAACCTGA TCATCAAGTC ATGACGGTTG ACGTTCTCCT 102029 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| .GTGAGTGTT CGAGTGAGAG ACAAACCTGA TCATCAAGTC ATGACGGTTG ACGTTCTCCT 589 TGCTCAGTTC AAAGATATGG TTGCATCATT TCAGTAAGAG TCGCCACTTC TCTTGCATTA 101969 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCTCAGTTC AAAGATATGG TTGCATCATT TCAGTAAGAG TCGCCACTTC TCTTGCATTA 649 TATCCCCGAG GGCTCTGGTG AGCGCAGCAC TCTAGACTCA CGGACATGGG TTTGAAACCT 101909 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATCCCCGAG GGCTCTGGTG AGCGCAGCAC TCTAGACTCA CGGACATGGG TTTGAAACCT 709 TGCCGCAGAA GAACGAACTG TTAATATTTT GATCCATTGT AGCTATTACA TTATAAATTC 101849 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCCGCAGAA GAACGAACTG TTAATATTTT GATCCATTGT AGCTATTACA TTATAAATTC 769 ACTAGGATAC CTTTTGACTT GAATGGTTTT CAATAGC-AT GTTAGCATCT TATTCTTTCT 101790 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| ACTAGGATAC CTTTTGACTT GAATGGTTTT CAATAGCNAT GTTAGCATCT TATTCTTTCT 829 TCTA 101786 |||| TCTA 833 hqPGS_C08HBa0336I24.1-_SGN-E540531- (106288 106217,105726 105634,105486 105265,104140 104069,103050 102979,102087 101786) ******************************************************************************** EST sequence 210 +strand 794 n (File: SGN-E540534+) 1 TTAGAGTTCA TCAGCTATGT GTATAAGATA TTTGGTTTCA CTTTTGACCT GAAGTTATCA 61 ACAAGGCCTG AAAAATTTCT TGGAGACATA GCAACTTGGG TAAAGGCTGA AGCTGCGCTT 121 TCTGAAGCAT TGAACGAGCA TGGGAAGCCC TGGGAGATCA ATGAAGGAGA CGGAGCATTT 181 TATGGCCCAA AAATTGATAT AAGTGTTTCT GATGCAATGA AGAGGAAATT CCAGTGTGCG 241 ACATTGCAGC TTGATTTCCA ACTCCCTCAA CGTTTCAACC TATCATACTC AGCAGAAGAT 301 GAAAGTAAGA GAGAGAGACC AGTTATGATA CATAGAGCGA TCCTTGGGTC AGTTGAGCGT 361 ATGTTCGCCA TTCTTTTGGA GCATTTCAAA GGGAAATGGC CTTTCTGGCT TAGTCCACGT 421 CAAGCTATGG TCTGCCCTGT TTCTGACAAA TCGCAGTCAT ATGCACTTAA GCTCCGGGAG 481 CAGATACATG ATGCTGGTTA TTACGTTGAT GTTGATACAA GTGACAGGAC AATTCAGAAA 541 AAGGTACGAG AGGCTCAAGT GGCACAATAT AACTATATTC TGGTTGTTGG AGAGGCTGAA 601 GCCAGTAGTG GGCAGGTGAG TGTTCGAGTG AGAGACAAAC CTGATCATCA AGTCATGACG 661 GTTGACGTTC TCCTTGCTCA GTTCAAAGAT ATGGTTGCAT CATTTCAGTA AGAGTCGCCA 721 CTTCTCTTGC ATTATATCCC CGAGGGCTCT GGTGAGCGCA GCACTCTAGA CTCACGGACA 781 TGGGTTTGAA ACCT Predicted gene structure (within gDNA segment 107173 to 101299): Exon 1 106573 106511 ( 63 n); cDNA 1 63 ( 63 n); score: 1.000 Intron 1 106510 106310 ( 201 n); Pd: 0.219 (s: 1.00), Pa: 0.985 (s: 1.00) Exon 2 106309 106217 ( 93 n); cDNA 64 156 ( 93 n); score: 0.989 Intron 2 106216 105727 ( 490 n); Pd: 0.998 (s: 0.98), Pa: 0.948 (s: 1.00) Exon 3 105726 105634 ( 93 n); cDNA 157 249 ( 93 n); score: 1.000 Intron 3 105633 105487 ( 147 n); Pd: 0.990 (s: 1.00), Pa: 0.992 (s: 1.00) Exon 4 105486 105265 ( 222 n); cDNA 250 471 ( 222 n); score: 1.000 Intron 4 105264 104141 (1124 n); Pd: 0.999 (s: 1.00), Pa: 0.991 (s: 1.00) Exon 5 104140 104069 ( 72 n); cDNA 472 543 ( 72 n); score: 1.000 Intron 5 104068 103051 (1018 n); Pd: 0.988 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 6 103050 102979 ( 72 n); cDNA 544 615 ( 72 n); score: 1.000 Intron 6 102978 102088 ( 891 n); Pd: 0.974 (s: 1.00), Pa: 0.999 (s: 1.00) Exon 7 102087 101909 ( 179 n); cDNA 616 794 ( 179 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E540534+ 0.999 794 1.000 C PGS_C08HBa0336I24.1-_SGN-E540534+ (106573 106511,106309 106217,105726 105634,105486 105265,104140 104069,103050 102979,102087 101909) Alignment (genomic DNA sequence = upper lines): TTAGAGTTCA TCAGCTATGT GTATAAGATA TTTGGTTTCA CTTTTGACCT GAAGTTATCA 106514 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAGAGTTCA TCAGCTATGT GTATAAGATA TTTGGTTTCA CTTTTGACCT GAAGTTATCA 60 ACAGTACTAC TTCATCTATT CCATTGTCCT TCAATTTTTT TTTACGCGAT TTCAGCTGAT 106454 ||| ACA....... .......... .......... .......... .......... .......... 63 ATTGATACTA CATGCATTTA TTATTTTATT AGTCATTACA GATACACCCT TAATATGGAA 106394 .......... .......... .......... .......... .......... .......... 63 CATTCATGTT GTGAATGTTT TTCATATTTT CCACATGCGT ACATTCTCTT TCCATGTATA 106334 .......... .......... .......... .......... .......... .......... 63 CCAACACATA TTTCTGACTT GCAGAGGCCT GAAAAATTTC TTGGAGACAT AGCAACTTGG 106274 |||||| |||||||||| |||||||||| |||||||||| .......... .......... ....AGGCCT GAAAAATTTC TTGGAGACAT AGCAACTTGG 99 GTAAAGGCTG AAGCTGCTCT TTCTGAAGCA TTGAACGAGC ATGGGAAGCC CTGGGAGGTT 106214 |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| ||||||| GTAAAGGCTG AAGCTGCGCT TTCTGAAGCA TTGAACGAGC ATGGGAAGCC CTGGGAG... 156 TGCTATCAAT TTTGTTGGAT TTTAAAATGT GAAGTTGTCA GACTGTTCTA CATTTAAAAT 106154 .......... .......... .......... .......... .......... .......... 156 GACTGGACTC CCTTTTTGCC GATTAAAAAA CATTTGATTT ACTCCTATTT TTGGTGCTTC 106094 .......... .......... .......... .......... .......... .......... 156 TATTTTTATT CATCCCAATT TATGTGTCGA CTCACTCAAT CAATTTTCTT TTTTAGAAAA 106034 .......... .......... .......... .......... .......... .......... 156 TCTTCATTTA AAAATTACGT CAGATCTCTT AATACTGGCA CCATTCTACT TGTTTTACGT 105974 .......... .......... .......... .......... .......... .......... 156 GAACACTATT TAAGCTAATA TCTTAGACTC CTTGAACAAT CAAATGTTGT AGTATAGAAT 105914 .......... .......... .......... .......... .......... .......... 156 GAGATGTAGG GAGTACCTTT TTCGTGTTAC CTGACAGAAA AAGTGAGGAT TGGGGTTGCT 105854 .......... .......... .......... .......... .......... .......... 156 CCTCTTGCAA TGTTCCTGTT TATCTATGGA AAATTAGGTA GTCCCCGCGT ATCAGTGTTT 105794 .......... .......... .......... .......... .......... .......... 156 TTTTGGTTAT TTTGTTTTCT TAATCTCTTT TATCTTGCCT TTTAATTAAA GAATCTCATT 105734 .......... .......... .......... .......... .......... .......... 156 CAATTAGATC AATGAAGGAG ACGGAGCATT TTATGGCCCA AAAATTGATA TAAGTGTTTC 105674 ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| .......ATC AATGAAGGAG ACGGAGCATT TTATGGCCCA AAAATTGATA TAAGTGTTTC 209 TGATGCAATG AAGAGGAAAT TCCAGTGTGC GACATTGCAG GTCATATTTG TTCCTATTCT 105614 |||||||||| |||||||||| |||||||||| |||||||||| TGATGCAATG AAGAGGAAAT TCCAGTGTGC GACATTGCAG .......... .......... 249 CCTTGGTTCA TTTTCACAAA CAATATCATT CTTTACCTTT GAAATTCACC TACCTTGAAA 105554 .......... .......... .......... .......... .......... .......... 249 TTGTTCTCAT GTTCTTTTGT ACCTTATTGG AAGTATCATC TGAAATTCTG AATGCTGTGT 105494 .......... .......... .......... .......... .......... .......... 249 TTTTCAGCTT GATTTCCAAC TCCCTCAACG TTTCAACCTA TCATACTCAG CAGAAGATGA 105434 ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| .......CTT GATTTCCAAC TCCCTCAACG TTTCAACCTA TCATACTCAG CAGAAGATGA 302 AAGTAAGAGA GAGAGACCAG TTATGATACA TAGAGCGATC CTTGGGTCAG TTGAGCGTAT 105374 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTAAGAGA GAGAGACCAG TTATGATACA TAGAGCGATC CTTGGGTCAG TTGAGCGTAT 362 GTTCGCCATT CTTTTGGAGC ATTTCAAAGG GAAATGGCCT TTCTGGCTTA GTCCACGTCA 105314 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTCGCCATT CTTTTGGAGC ATTTCAAAGG GAAATGGCCT TTCTGGCTTA GTCCACGTCA 422 AGCTATGGTC TGCCCTGTTT CTGACAAATC GCAGTCATAT GCACTTAAGG TTAGTTACAT 105254 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| AGCTATGGTC TGCCCTGTTT CTGACAAATC GCAGTCATAT GCACTTAAG. .......... 471 TTACGAACTT TCTCCTATTG ATGTATTAAT GTTTTAACTA TTTAAAGACT CCCTTCTCTG 105194 .......... .......... .......... .......... .......... .......... 471 AATCCTTTCT GTGCATCTGA TTGGATGATA TTCCTTAGAT TTTTTTAATT TTGGTGTAAT 105134 .......... .......... .......... .......... .......... .......... 471 GTTATTACTG TTGGGCATGT CTCGTTCTTT TTATTCAACT CAAAGGGTAC TCATGGTAGT 105074 .......... .......... .......... .......... .......... .......... 471 TAGCGTTAGT TTTTCTTCTC TTATTTCTTT TCGTTCTTTA TAGTAAGTAG TGTGATTTGT 105014 .......... .......... .......... .......... .......... .......... 471 TGATGCCTTT TTTTAATAAC TAGGTATGTT GTTTTACTAA TTAAAAGTAC CAAGAAGGTA 104954 .......... .......... .......... .......... .......... .......... 471 CAACATAAGT AAAGCAAGAG AAGTTTATTG TTGATACCTG TAGATTTAAA CTTCAATTTG 104894 .......... .......... .......... .......... .......... .......... 471 TTAGTTACTA AGTAGGCTGG ATGTATGTAA TTTCTCAAAC ACAGTAACAT GGTTGTACAG 104834 .......... .......... .......... .......... .......... .......... 471 ATAGAATCTT TGAGGGGTAA AAAATACAAT ATAGGATTTT GTGTTGACGT CTGCAATTGC 104774 .......... .......... .......... .......... .......... .......... 471 ACTGTTGGTG TTGCCTTCAA AGCATGAAAC AGGGTTTAGA AGTGCTGTAG ATTGTGCAGT 104714 .......... .......... .......... .......... .......... .......... 471 TACAGATTTT GAGAAAATAA TTATAGGATT TTTTTGTTGG CATCTACAAT TGCACTGGTT 104654 .......... .......... .......... .......... .......... .......... 471 GGTGTTGTCT GCAAATCATG AAGAGTGATT GTGAAGTTCT TTGAATTCAC AGAGTTGGTA 104594 .......... .......... .......... .......... .......... .......... 471 GAACCTGCAT ACATGTAATT ATTGAAGATG CTGAGTAGAG AAGTTGGGCA GTTGATAGGG 104534 .......... .......... .......... .......... .......... .......... 471 AAGGGTAGCT TTTTGGCTCA GCTCCCATAT TTTGCCAACT TCCTCGACAG GAAGATAAAG 104474 .......... .......... .......... .......... .......... .......... 471 AAATGTATGT TGTTGAGGAT TATTGGAGCC CCAATAGGTC ATGATCACTG TATATGTATC 104414 .......... .......... .......... .......... .......... .......... 471 CTGCAGGGCA CATATAGTTT TTTTAGTAAG ACCACATTTT TTTTGTTGAT TTAAGTCTAT 104354 .......... .......... .......... .......... .......... .......... 471 TTTGAAGAAT ACGTGTGAAA CACCTTCACC CATGTGATGC GTTGCAATGG AGGTACGTCC 104294 .......... .......... .......... .......... .......... .......... 471 ATGTAAAAAA GGACATAATA TAAAAAAGTC AACTTGCCGA TTGAGAAAAC ATAAATATGC 104234 .......... .......... .......... .......... .......... .......... 471 TGAGTTTATT TACCAAATAT GCTTTCGTGA ATAATTTTGT GTACTTAATC CATTGTGAAA 104174 .......... .......... .......... .......... .......... .......... 471 ATTGCTTTAA CGTGTTGCTC TTCTTTTATT CAGCTCCGGG AGCAGATACA TGATGCTGGT 104114 ||||||| |||||||||| |||||||||| .......... .......... .......... ...CTCCGGG AGCAGATACA TGATGCTGGT 498 TATTACGTTG ATGTTGATAC AAGTGACAGG ACAATTCAGA AAAAGGTTAG ATTCTTATTG 104054 |||||||||| |||||||||| |||||||||| |||||||||| ||||| TATTACGTTG ATGTTGATAC AAGTGACAGG ACAATTCAGA AAAAG..... .......... 543 TAGTATATCA TGTAAAATGC ATGATTGGTT CACTTTATGA GGGTCACTAG CATTTTTCCT 103994 .......... .......... .......... .......... .......... .......... 543 ATATGATCTC ATTATAGTTT ACAGTAACAT TTAGGGGTCC AAGGACCAAG TACAGTGAGT 103934 .......... .......... .......... .......... .......... .......... 543 TCCTCTGTTT TCTGGGGGAA GTTTATCTTA CAGAAGGAAA TAAGGGTCCA TTTGTAATAG 103874 .......... .......... .......... .......... .......... .......... 543 TTACTCCATA AGACCTGGCA AGTTATGATC AAAAAGGGTC CACCAGTTAT GTCACTTAAC 103814 .......... .......... .......... .......... .......... .......... 543 CTCACCAATC TGTGCAGAGC ACTATTGAAA TCATTAGGAT GGTCAATATG ATCGTATAAT 103754 .......... .......... .......... .......... .......... .......... 543 TGGTCATGGG GAAAATATCA TAGTGCCCTA CAGATTTGTG TTCATTTCAG CAATGGACAA 103694 .......... .......... .......... .......... .......... .......... 543 ATTTTATCAA TTTTTCCATT TAAGTTTATA AACCTATATC TATGTGAAAA CTCACCTATG 103634 .......... .......... .......... .......... .......... .......... 543 CAGTGTGACA TAGTTTAGGT CATTTTACCA TTTAGTCCAT GACATAAGAG ATCAAATCCT 103574 .......... .......... .......... .......... .......... .......... 543 TTTTAACTGT GACCATTATG GTTTGTACGC CATTTTGTTG AGGTTGTATT AATATATCAA 103514 .......... .......... .......... .......... .......... .......... 543 CATATGTCAA TTGTGCTTAC CTACTTTGTG ACTGGATACT AACATACAAA GGATTGGCAA 103454 .......... .......... .......... .......... .......... .......... 543 AAATTGCCAT TCTCTTGAAG CCAGATGTTG CTTAGACAAA TTCAAGAGAA ATGCAGTCTA 103394 .......... .......... .......... .......... .......... .......... 543 TTTCTCAAGT AAAAAAAGGG ACTGAAATTT TCTTGAATTA GTTAAGTAAC ATCTGGCTTC 103334 .......... .......... .......... .......... .......... .......... 543 AGAAAGCAAC CAGACAAATT AACTAGTCGA CTGAAAAATT GGAAAATAGG ATGTAAAGTC 103274 .......... .......... .......... .......... .......... .......... 543 CGTCCACAAA ATAATTGGTA AAACCTGAAA TCTGTCATGT ATCTGCTCTT GTACTCTGAA 103214 .......... .......... .......... .......... .......... .......... 543 GAGCACATGA TTGCAAATGG TATTACGTAA TGCTTTCAGT TTTTGAAGCT ACGCACTTGA 103154 .......... .......... .......... .......... .......... .......... 543 TGATCCGATA AATTTTTCTC TCAAGTAATA CAAGTTAAGT CTCAAGTTGA AAACTTTTGT 103094 .......... .......... .......... .......... .......... .......... 543 TGGTCTGTTA AACGATTGCT TGTGGCTTTT AATGTATATG CAGGTACGAG AGGCTCAAGT 103034 ||||||| |||||||||| .......... .......... .......... .......... ...GTACGAG AGGCTCAAGT 560 GGCACAATAT AACTATATTC TGGTTGTTGG AGAGGCTGAA GCCAGTAGTG GGCAGGTATC 102974 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| GGCACAATAT AACTATATTC TGGTTGTTGG AGAGGCTGAA GCCAGTAGTG GGCAG..... 615 TTATTTCCCC CCAACCTTCA CTGCTTTTCC CCACAGCCTG CATTGCTGTA TCTCTTTTTA 102914 .......... .......... .......... .......... .......... .......... 615 AAATGTGCAA TTGAACAAAC TAAAAAAAAT ATTCTGTATC ACTTTGGTTC AGCTCATCAG 102854 .......... .......... .......... .......... .......... .......... 615 CTTTCTAAGG TTCTGAAATA ACCTTTGTCA AGAAAAGGTT CTGGCTGATA ATTAACTTCT 102794 .......... .......... .......... .......... .......... .......... 615 TGTATGTACT GTTGTTTTGT ATTGATTGAG ATATTTTGTG GGTCACTTGT TTGATTTCTT 102734 .......... .......... .......... .......... .......... .......... 615 CTTGTTCCTC TTCTTCCAAC TCCTATTATT GATAAAGATG TATATTATGC TAAACTTTCT 102674 .......... .......... .......... .......... .......... .......... 615 GCAAATTACT GATTTGTCTC TATCCCACCC CGTGTGAAGA ACTAGAAAGA AAGGGCTTCC 102614 .......... .......... .......... .......... .......... .......... 615 AGCATGATTT GTGGGGGTTC ATTGACAAAT TCTCTTACAG TAGCCCTGGT AACAGAGATG 102554 .......... .......... .......... .......... .......... .......... 615 TTTTAGGAAC AAAATCTCTT ATGATATCAC CTATACGGTG TCTTCAGTAG CAGCTAAACA 102494 .......... .......... .......... .......... .......... .......... 615 ATTGAAAGTA ATTGAAACTG AATATTTCCC ACCAAAAGAT CAGTCCCATT ATAACATTCA 102434 .......... .......... .......... .......... .......... .......... 615 CATGAAGGAG CTTTGAGAAT GTCAAAACCA TTTGATAGAT TTAGTAGCCA ATCAGATCAC 102374 .......... .......... .......... .......... .......... .......... 615 CTATGGCTGG ATAATTCTGA CTTTACTAGG CAAGATGTTT CTGCTTAGCT GGTGATTGAT 102314 .......... .......... .......... .......... .......... .......... 615 TTGTTTGGGA AAAAAATGTC TTATTTTGCT GGTTTGATGG GGTGCCCATC AACTTTTGGT 102254 .......... .......... .......... .......... .......... .......... 615 TGTCATTCCA AATACTCTGC TTAGTGATGT TTTTGGTTGT CAGTTTCCTA GGTTCATGCC 102194 .......... .......... .......... .......... .......... .......... 615 TCCACATATG ATTTTCTTGT CTTCTCATTT CAAATCTTGT AGCCAAGTTT TACTGCTTTT 102134 .......... .......... .......... .......... .......... .......... 615 TATTTTTGCT GAAAAATATG GTCTCTCTGT ATGTGAATGA TTCTAGGTGA GTGTTCGAGT 102074 |||| |||||||||| .......... .......... .......... .......... ......GTGA GTGTTCGAGT 629 GAGAGACAAA CCTGATCATC AAGTCATGAC GGTTGACGTT CTCCTTGCTC AGTTCAAAGA 102014 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGAGACAAA CCTGATCATC AAGTCATGAC GGTTGACGTT CTCCTTGCTC AGTTCAAAGA 689 TATGGTTGCA TCATTTCAGT AAGAGTCGCC ACTTCTCTTG CATTATATCC CCGAGGGCTC 101954 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATGGTTGCA TCATTTCAGT AAGAGTCGCC ACTTCTCTTG CATTATATCC CCGAGGGCTC 749 TGGTGAGCGC AGCACTCTAG ACTCACGGAC ATGGGTTTGA AACCT 101909 |||||||||| |||||||||| |||||||||| |||||||||| ||||| TGGTGAGCGC AGCACTCTAG ACTCACGGAC ATGGGTTTGA AACCT 794 hqPGS_C08HBa0336I24.1-_SGN-E540534+ (106573 106511,106309 106217,105726 105634,105486 105265,104140 104069,103050 102979,102087 101909) ******************************************************************************** EST sequence 142 +strand 633 n (File: SGN-E305449+) 1 ATGAAAAGGA AATTTCAGTG TGCAACATTG CAGCTTGATT TCCAACTTCC TCAACGATTC 61 AACCTGTCAT ACTCAGCAGA AGATGAAAGT AAGAGGGAGA GACCAGTTAT GATACATAGA 121 GCTATACTTG GATCAGTTGA GCGCATGTTC GCTATTCTCT TGGAGCATTT CAAGGGGAAA 181 TGGCCTTTCT GGCTTAGTCC ACGTCAAGCG ATGGTCTGCC CTGTTTCCGA CAAATCTCTG 241 TCGTATGCAT TTGAGCTCCG GGAGCGGATA CATGATGCTG GTTATTATGT TGATGTTGAT 301 ACCAGTGACA GGACAATCCA GAAAAAGGTA CGCGAAGCTC AAATGGCACA ATATAACTAT 361 ATTCTAGTTG TTGGAGAAGC TGAAGCCAGT AGTGGGCAGG TGAGCGTTCG AGTGAGAAGC 421 AAGTCTGATC ATGAAGTCAT GACAGTTGAC GGCCTCCTCA CTCACTTCAA AGATTTGGTC 481 GCGTCATTTC AGTAGAGGAG TCATTGTTTC TCTTGCATTA TACCACTGAA GAGATGTAGT 541 ACACAATCAA GGTTCAATTT TATCTTACAT TGTGTGAGAT TGTAATACAT GCCAACACAA 601 GTTGATTTTT TTTTGGTTCT TCAGCAATCA ATA Predicted gene structure (within gDNA segment 106713 to 100047): Exon 1 105666 105634 ( 33 n); cDNA 1 33 ( 33 n); score: 0.909 Intron 1 105633 105487 ( 147 n); Pd: 0.990 (s: 0), Pa: 0.992 (s: 0.94) Exon 2 105486 105265 ( 222 n); cDNA 34 255 ( 222 n); score: 0.919 Intron 2 105264 104141 (1124 n); Pd: 0.999 (s: 0.86), Pa: 0.991 (s: 0.94) Exon 3 104140 104069 ( 72 n); cDNA 256 327 ( 72 n); score: 0.944 Intron 3 104068 103051 (1018 n); Pd: 0.988 (s: 0.94), Pa: 1.000 (s: 0.92) Exon 4 103050 102979 ( 72 n); cDNA 328 399 ( 72 n); score: 0.931 Intron 4 102978 102088 ( 891 n); Pd: 0.974 (s: 0.96), Pa: 0.999 (s: 0.86) Exon 5 102087 101960 ( 128 n); cDNA 400 529 ( 130 n); score: 0.781 MATCH C08HBa0336I24.1- SGN-E305449+ 0.889 527 0.833 C PGS_C08HBa0336I24.1-_SGN-E305449+ (105666 105634,105486 105265,104140 104069,103050 102979,102087 101960) Alignment (genomic DNA sequence = upper lines): ATGAAGAGGA AATTCCAGTG TGCGACATTG CAGGTCATAT TTGTTCCTAT TCTCCTTGGT 105607 ||||| |||| |||| ||||| ||| |||||| ||| ATGAAAAGGA AATTTCAGTG TGCAACATTG CAG....... .......... .......... 33 TCATTTTCAC AAACAATATC ATTCTTTACC TTTGAAATTC ACCTACCTTG AAATTGTTCT 105547 .......... .......... .......... .......... .......... .......... 33 CATGTTCTTT TGTACCTTAT TGGAAGTATC ATCTGAAATT CTGAATGCTG TGTTTTTCAG 105487 .......... .......... .......... .......... .......... .......... 33 CTTGATTTCC AACTCCCTCA ACGTTTCAAC CTATCATACT CAGCAGAAGA TGAAAGTAAG 105427 |||||||||| |||| ||||| ||| |||||| || ||||||| |||||||||| |||||||||| CTTGATTTCC AACTTCCTCA ACGATTCAAC CTGTCATACT CAGCAGAAGA TGAAAGTAAG 93 AGAGAGAGAC CAGTTATGAT ACATAGAGCG ATCCTTGGGT CAGTTGAGCG TATGTTCGCC 105367 || ||||||| |||||||||| ||||||||| || ||||| | |||||||||| |||||||| AGGGAGAGAC CAGTTATGAT ACATAGAGCT ATACTTGGAT CAGTTGAGCG CATGTTCGCT 153 ATTCTTTTGG AGCATTTCAA AGGGAAATGG CCTTTCTGGC TTAGTCCACG TCAAGCTATG 105307 ||||| |||| |||||||||| ||||||||| |||||||||| |||||||||| |||||| ||| ATTCTCTTGG AGCATTTCAA GGGGAAATGG CCTTTCTGGC TTAGTCCACG TCAAGCGATG 213 GTCTGCCCTG TTTCTGACAA ATCGCAGTCA TATGCACTTA AGGTTAGTTA CATTTACGAA 105247 |||||||||| |||| ||||| ||| | ||| |||||| || || GTCTGCCCTG TTTCCGACAA ATCTCTGTCG TATGCATTTG AG........ .......... 255 CTTTCTCCTA TTGATGTATT AATGTTTTAA CTATTTAAAG ACTCCCTTCT CTGAATCCTT 105187 .......... .......... .......... .......... .......... .......... 255 TCTGTGCATC TGATTGGATG ATATTCCTTA GATTTTTTTA ATTTTGGTGT AATGTTATTA 105127 .......... .......... .......... .......... .......... .......... 255 CTGTTGGGCA TGTCTCGTTC TTTTTATTCA ACTCAAAGGG TACTCATGGT AGTTAGCGTT 105067 .......... .......... .......... .......... .......... .......... 255 AGTTTTTCTT CTCTTATTTC TTTTCGTTCT TTATAGTAAG TAGTGTGATT TGTTGATGCC 105007 .......... .......... .......... .......... .......... .......... 255 TTTTTTTAAT AACTAGGTAT GTTGTTTTAC TAATTAAAAG TACCAAGAAG GTACAACATA 104947 .......... .......... .......... .......... .......... .......... 255 AGTAAAGCAA GAGAAGTTTA TTGTTGATAC CTGTAGATTT AAACTTCAAT TTGTTAGTTA 104887 .......... .......... .......... .......... .......... .......... 255 CTAAGTAGGC TGGATGTATG TAATTTCTCA AACACAGTAA CATGGTTGTA CAGATAGAAT 104827 .......... .......... .......... .......... .......... .......... 255 CTTTGAGGGG TAAAAAATAC AATATAGGAT TTTGTGTTGA CGTCTGCAAT TGCACTGTTG 104767 .......... .......... .......... .......... .......... .......... 255 GTGTTGCCTT CAAAGCATGA AACAGGGTTT AGAAGTGCTG TAGATTGTGC AGTTACAGAT 104707 .......... .......... .......... .......... .......... .......... 255 TTTGAGAAAA TAATTATAGG ATTTTTTTGT TGGCATCTAC AATTGCACTG GTTGGTGTTG 104647 .......... .......... .......... .......... .......... .......... 255 TCTGCAAATC ATGAAGAGTG ATTGTGAAGT TCTTTGAATT CACAGAGTTG GTAGAACCTG 104587 .......... .......... .......... .......... .......... .......... 255 CATACATGTA ATTATTGAAG ATGCTGAGTA GAGAAGTTGG GCAGTTGATA GGGAAGGGTA 104527 .......... .......... .......... .......... .......... .......... 255 GCTTTTTGGC TCAGCTCCCA TATTTTGCCA ACTTCCTCGA CAGGAAGATA AAGAAATGTA 104467 .......... .......... .......... .......... .......... .......... 255 TGTTGTTGAG GATTATTGGA GCCCCAATAG GTCATGATCA CTGTATATGT ATCCTGCAGG 104407 .......... .......... .......... .......... .......... .......... 255 GCACATATAG TTTTTTTAGT AAGACCACAT TTTTTTTGTT GATTTAAGTC TATTTTGAAG 104347 .......... .......... .......... .......... .......... .......... 255 AATACGTGTG AAACACCTTC ACCCATGTGA TGCGTTGCAA TGGAGGTACG TCCATGTAAA 104287 .......... .......... .......... .......... .......... .......... 255 AAAGGACATA ATATAAAAAA GTCAACTTGC CGATTGAGAA AACATAAATA TGCTGAGTTT 104227 .......... .......... .......... .......... .......... .......... 255 ATTTACCAAA TATGCTTTCG TGAATAATTT TGTGTACTTA ATCCATTGTG AAAATTGCTT 104167 .......... .......... .......... .......... .......... .......... 255 TAACGTGTTG CTCTTCTTTT ATTCAGCTCC GGGAGCAGAT ACATGATGCT GGTTATTACG 104107 |||| |||||| ||| |||||||||| |||||||| | .......... .......... ......CTCC GGGAGCGGAT ACATGATGCT GGTTATTATG 289 TTGATGTTGA TACAAGTGAC AGGACAATTC AGAAAAAGGT TAGATTCTTA TTGTAGTATA 104047 |||||||||| ||| |||||| |||||||| | |||||||| TTGATGTTGA TACCAGTGAC AGGACAATCC AGAAAAAG.. .......... .......... 327 TCATGTAAAA TGCATGATTG GTTCACTTTA TGAGGGTCAC TAGCATTTTT CCTATATGAT 103987 .......... .......... .......... .......... .......... .......... 327 CTCATTATAG TTTACAGTAA CATTTAGGGG TCCAAGGACC AAGTACAGTG AGTTCCTCTG 103927 .......... .......... .......... .......... .......... .......... 327 TTTTCTGGGG GAAGTTTATC TTACAGAAGG AAATAAGGGT CCATTTGTAA TAGTTACTCC 103867 .......... .......... .......... .......... .......... .......... 327 ATAAGACCTG GCAAGTTATG ATCAAAAAGG GTCCACCAGT TATGTCACTT AACCTCACCA 103807 .......... .......... .......... .......... .......... .......... 327 ATCTGTGCAG AGCACTATTG AAATCATTAG GATGGTCAAT ATGATCGTAT AATTGGTCAT 103747 .......... .......... .......... .......... .......... .......... 327 GGGGAAAATA TCATAGTGCC CTACAGATTT GTGTTCATTT CAGCAATGGA CAAATTTTAT 103687 .......... .......... .......... .......... .......... .......... 327 CAATTTTTCC ATTTAAGTTT ATAAACCTAT ATCTATGTGA AAACTCACCT ATGCAGTGTG 103627 .......... .......... .......... .......... .......... .......... 327 ACATAGTTTA GGTCATTTTA CCATTTAGTC CATGACATAA GAGATCAAAT CCTTTTTAAC 103567 .......... .......... .......... .......... .......... .......... 327 TGTGACCATT ATGGTTTGTA CGCCATTTTG TTGAGGTTGT ATTAATATAT CAACATATGT 103507 .......... .......... .......... .......... .......... .......... 327 CAATTGTGCT TACCTACTTT GTGACTGGAT ACTAACATAC AAAGGATTGG CAAAAATTGC 103447 .......... .......... .......... .......... .......... .......... 327 CATTCTCTTG AAGCCAGATG TTGCTTAGAC AAATTCAAGA GAAATGCAGT CTATTTCTCA 103387 .......... .......... .......... .......... .......... .......... 327 AGTAAAAAAA GGGACTGAAA TTTTCTTGAA TTAGTTAAGT AACATCTGGC TTCAGAAAGC 103327 .......... .......... .......... .......... .......... .......... 327 AACCAGACAA ATTAACTAGT CGACTGAAAA ATTGGAAAAT AGGATGTAAA GTCCGTCCAC 103267 .......... .......... .......... .......... .......... .......... 327 AAAATAATTG GTAAAACCTG AAATCTGTCA TGTATCTGCT CTTGTACTCT GAAGAGCACA 103207 .......... .......... .......... .......... .......... .......... 327 TGATTGCAAA TGGTATTACG TAATGCTTTC AGTTTTTGAA GCTACGCACT TGATGATCCG 103147 .......... .......... .......... .......... .......... .......... 327 ATAAATTTTT CTCTCAAGTA ATACAAGTTA AGTCTCAAGT TGAAAACTTT TGTTGGTCTG 103087 .......... .......... .......... .......... .......... .......... 327 TTAAACGATT GCTTGTGGCT TTTAATGTAT ATGCAGGTAC GAGAGGCTCA AGTGGCACAA 103027 |||| | || ||||| | |||||||| .......... .......... .......... ......GTAC GCGAAGCTCA AATGGCACAA 351 TATAACTATA TTCTGGTTGT TGGAGAGGCT GAAGCCAGTA GTGGGCAGGT ATCTTATTTC 102967 |||||||||| |||| ||||| |||||| ||| |||||||||| |||||||| TATAACTATA TTCTAGTTGT TGGAGAAGCT GAAGCCAGTA GTGGGCAG.. .......... 399 CCCCCAACCT TCACTGCTTT TCCCCACAGC CTGCATTGCT GTATCTCTTT TTAAAATGTG 102907 .......... .......... .......... .......... .......... .......... 399 CAATTGAACA AACTAAAAAA AATATTCTGT ATCACTTTGG TTCAGCTCAT CAGCTTTCTA 102847 .......... .......... .......... .......... .......... .......... 399 AGGTTCTGAA ATAACCTTTG TCAAGAAAAG GTTCTGGCTG ATAATTAACT TCTTGTATGT 102787 .......... .......... .......... .......... .......... .......... 399 ACTGTTGTTT TGTATTGATT GAGATATTTT GTGGGTCACT TGTTTGATTT CTTCTTGTTC 102727 .......... .......... .......... .......... .......... .......... 399 CTCTTCTTCC AACTCCTATT ATTGATAAAG ATGTATATTA TGCTAAACTT TCTGCAAATT 102667 .......... .......... .......... .......... .......... .......... 399 ACTGATTTGT CTCTATCCCA CCCCGTGTGA AGAACTAGAA AGAAAGGGCT TCCAGCATGA 102607 .......... .......... .......... .......... .......... .......... 399 TTTGTGGGGG TTCATTGACA AATTCTCTTA CAGTAGCCCT GGTAACAGAG ATGTTTTAGG 102547 .......... .......... .......... .......... .......... .......... 399 AACAAAATCT CTTATGATAT CACCTATACG GTGTCTTCAG TAGCAGCTAA ACAATTGAAA 102487 .......... .......... .......... .......... .......... .......... 399 GTAATTGAAA CTGAATATTT CCCACCAAAA GATCAGTCCC ATTATAACAT TCACATGAAG 102427 .......... .......... .......... .......... .......... .......... 399 GAGCTTTGAG AATGTCAAAA CCATTTGATA GATTTAGTAG CCAATCAGAT CACCTATGGC 102367 .......... .......... .......... .......... .......... .......... 399 TGGATAATTC TGACTTTACT AGGCAAGATG TTTCTGCTTA GCTGGTGATT GATTTGTTTG 102307 .......... .......... .......... .......... .......... .......... 399 GGAAAAAAAT GTCTTATTTT GCTGGTTTGA TGGGGTGCCC ATCAACTTTT GGTTGTCATT 102247 .......... .......... .......... .......... .......... .......... 399 CCAAATACTC TGCTTAGTGA TGTTTTTGGT TGTCAGTTTC CTAGGTTCAT GCCTCCACAT 102187 .......... .......... .......... .......... .......... .......... 399 ATGATTTTCT TGTCTTCTCA TTTCAAATCT TGTAGCCAAG TTTTACTGCT TTTTATTTTT 102127 .......... .......... .......... .......... .......... .......... 399 GCTGAAAAAT ATGGTCTCTC TGTATGTGAA TGATTCTAGG TGAGTGTTCG AGTGAGAGAC 102067 | |||| ||||| ||||||| | .......... .......... .......... .........G TGAGCGTTCG AGTGAGAAGC 420 AAACCTGATC ATCAAGTCAT GACGGTTGAC GTTCTCCTTG CTCAGTTCAA AGATATGGTT 102007 || |||||| || ||||||| ||| |||||| | ||||| |||| ||||| |||| |||| AAGTCTGATC ATGAAGTCAT GACAGTTGAC GGCCTCCTCA CTCACTTCAA AGATTTGGTC 480 GCATCATTTC AGTA-A-GAG TCGCCACTTC TCTTGCATTA TATCCCCGA 101960 || ||||||| |||| | ||| || ||| |||||||||| || | | || GCGTCATTTC AGTAGAGGAG TCATTGTTTC TCTTGCATTA TACCACTGA 529 hqPGS_C08HBa0336I24.1-_SGN-E305449+ (105666 105634,105486 105265,104140 104069,103050 102979,102087 101960) ******************************************************************************** EST sequence 207 +strand 365 n (File: SGN-E231294+) 1 CAGTTGAGCG TATGTTCGCC ATTCTTTTGG AGCATTTCAA AGGGAAATGG CCTTTCTGGC 61 TTAGTCCACG TCAAGCTATG GTCTGCCCTG TTTCTGACAA ATCGCAGTCA TATGCACTTA 121 AGCTCCGGGA GCAGATACAT GATGCTGGTT ATTACGTTGA TGTTGATACA AGTGACAGGA 181 CAATTCAGAA AAAGGTACGA GAGGCTCAAG TGGCACAATA TAACTATATT CTGGTTGTTG 241 GAGAGGCTGA AGCCAGTAGT GGGCAGGTGA GTGTTCGAGT GAGAGACAAA CCTGATCATC 301 AAGTCATGAC GGTTGACGTT CTCCTTGCTC AGTTCAAAGA TATGGGTGCA TCATTTCAGT 361 AAGAG Predicted gene structure (within gDNA segment 105986 to 101379): Exon 1 105386 105265 ( 122 n); cDNA 1 122 ( 122 n); score: 1.000 Intron 1 105264 104141 (1124 n); Pd: 0.999 (s: 1.00), Pa: 0.991 (s: 1.00) Exon 2 104140 104069 ( 72 n); cDNA 123 194 ( 72 n); score: 1.000 Intron 2 104068 103051 (1018 n); Pd: 0.988 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 3 103050 102979 ( 72 n); cDNA 195 266 ( 72 n); score: 1.000 Intron 3 102978 102088 ( 891 n); Pd: 0.974 (s: 1.00), Pa: 0.999 (s: 1.00) Exon 4 102087 101989 ( 99 n); cDNA 267 365 ( 99 n); score: 0.990 MATCH C08HBa0336I24.1- SGN-E231294+ 0.997 365 1.000 C PGS_C08HBa0336I24.1-_SGN-E231294+ (105386 105265,104140 104069,103050 102979,102087 101989) Alignment (genomic DNA sequence = upper lines): CAGTTGAGCG TATGTTCGCC ATTCTTTTGG AGCATTTCAA AGGGAAATGG CCTTTCTGGC 105327 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGTTGAGCG TATGTTCGCC ATTCTTTTGG AGCATTTCAA AGGGAAATGG CCTTTCTGGC 60 TTAGTCCACG TCAAGCTATG GTCTGCCCTG TTTCTGACAA ATCGCAGTCA TATGCACTTA 105267 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAGTCCACG TCAAGCTATG GTCTGCCCTG TTTCTGACAA ATCGCAGTCA TATGCACTTA 120 AGGTTAGTTA CATTTACGAA CTTTCTCCTA TTGATGTATT AATGTTTTAA CTATTTAAAG 105207 || AG........ .......... .......... .......... .......... .......... 122 ACTCCCTTCT CTGAATCCTT TCTGTGCATC TGATTGGATG ATATTCCTTA GATTTTTTTA 105147 .......... .......... .......... .......... .......... .......... 122 ATTTTGGTGT AATGTTATTA CTGTTGGGCA TGTCTCGTTC TTTTTATTCA ACTCAAAGGG 105087 .......... .......... .......... .......... .......... .......... 122 TACTCATGGT AGTTAGCGTT AGTTTTTCTT CTCTTATTTC TTTTCGTTCT TTATAGTAAG 105027 .......... .......... .......... .......... .......... .......... 122 TAGTGTGATT TGTTGATGCC TTTTTTTAAT AACTAGGTAT GTTGTTTTAC TAATTAAAAG 104967 .......... .......... .......... .......... .......... .......... 122 TACCAAGAAG GTACAACATA AGTAAAGCAA GAGAAGTTTA TTGTTGATAC CTGTAGATTT 104907 .......... .......... .......... .......... .......... .......... 122 AAACTTCAAT TTGTTAGTTA CTAAGTAGGC TGGATGTATG TAATTTCTCA AACACAGTAA 104847 .......... .......... .......... .......... .......... .......... 122 CATGGTTGTA CAGATAGAAT CTTTGAGGGG TAAAAAATAC AATATAGGAT TTTGTGTTGA 104787 .......... .......... .......... .......... .......... .......... 122 CGTCTGCAAT TGCACTGTTG GTGTTGCCTT CAAAGCATGA AACAGGGTTT AGAAGTGCTG 104727 .......... .......... .......... .......... .......... .......... 122 TAGATTGTGC AGTTACAGAT TTTGAGAAAA TAATTATAGG ATTTTTTTGT TGGCATCTAC 104667 .......... .......... .......... .......... .......... .......... 122 AATTGCACTG GTTGGTGTTG TCTGCAAATC ATGAAGAGTG ATTGTGAAGT TCTTTGAATT 104607 .......... .......... .......... .......... .......... .......... 122 CACAGAGTTG GTAGAACCTG CATACATGTA ATTATTGAAG ATGCTGAGTA GAGAAGTTGG 104547 .......... .......... .......... .......... .......... .......... 122 GCAGTTGATA GGGAAGGGTA GCTTTTTGGC TCAGCTCCCA TATTTTGCCA ACTTCCTCGA 104487 .......... .......... .......... .......... .......... .......... 122 CAGGAAGATA AAGAAATGTA TGTTGTTGAG GATTATTGGA GCCCCAATAG GTCATGATCA 104427 .......... .......... .......... .......... .......... .......... 122 CTGTATATGT ATCCTGCAGG GCACATATAG TTTTTTTAGT AAGACCACAT TTTTTTTGTT 104367 .......... .......... .......... .......... .......... .......... 122 GATTTAAGTC TATTTTGAAG AATACGTGTG AAACACCTTC ACCCATGTGA TGCGTTGCAA 104307 .......... .......... .......... .......... .......... .......... 122 TGGAGGTACG TCCATGTAAA AAAGGACATA ATATAAAAAA GTCAACTTGC CGATTGAGAA 104247 .......... .......... .......... .......... .......... .......... 122 AACATAAATA TGCTGAGTTT ATTTACCAAA TATGCTTTCG TGAATAATTT TGTGTACTTA 104187 .......... .......... .......... .......... .......... .......... 122 ATCCATTGTG AAAATTGCTT TAACGTGTTG CTCTTCTTTT ATTCAGCTCC GGGAGCAGAT 104127 |||| |||||||||| .......... .......... .......... .......... ......CTCC GGGAGCAGAT 136 ACATGATGCT GGTTATTACG TTGATGTTGA TACAAGTGAC AGGACAATTC AGAAAAAGGT 104067 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| ACATGATGCT GGTTATTACG TTGATGTTGA TACAAGTGAC AGGACAATTC AGAAAAAG.. 194 TAGATTCTTA TTGTAGTATA TCATGTAAAA TGCATGATTG GTTCACTTTA TGAGGGTCAC 104007 .......... .......... .......... .......... .......... .......... 194 TAGCATTTTT CCTATATGAT CTCATTATAG TTTACAGTAA CATTTAGGGG TCCAAGGACC 103947 .......... .......... .......... .......... .......... .......... 194 AAGTACAGTG AGTTCCTCTG TTTTCTGGGG GAAGTTTATC TTACAGAAGG AAATAAGGGT 103887 .......... .......... .......... .......... .......... .......... 194 CCATTTGTAA TAGTTACTCC ATAAGACCTG GCAAGTTATG ATCAAAAAGG GTCCACCAGT 103827 .......... .......... .......... .......... .......... .......... 194 TATGTCACTT AACCTCACCA ATCTGTGCAG AGCACTATTG AAATCATTAG GATGGTCAAT 103767 .......... .......... .......... .......... .......... .......... 194 ATGATCGTAT AATTGGTCAT GGGGAAAATA TCATAGTGCC CTACAGATTT GTGTTCATTT 103707 .......... .......... .......... .......... .......... .......... 194 CAGCAATGGA CAAATTTTAT CAATTTTTCC ATTTAAGTTT ATAAACCTAT ATCTATGTGA 103647 .......... .......... .......... .......... .......... .......... 194 AAACTCACCT ATGCAGTGTG ACATAGTTTA GGTCATTTTA CCATTTAGTC CATGACATAA 103587 .......... .......... .......... .......... .......... .......... 194 GAGATCAAAT CCTTTTTAAC TGTGACCATT ATGGTTTGTA CGCCATTTTG TTGAGGTTGT 103527 .......... .......... .......... .......... .......... .......... 194 ATTAATATAT CAACATATGT CAATTGTGCT TACCTACTTT GTGACTGGAT ACTAACATAC 103467 .......... .......... .......... .......... .......... .......... 194 AAAGGATTGG CAAAAATTGC CATTCTCTTG AAGCCAGATG TTGCTTAGAC AAATTCAAGA 103407 .......... .......... .......... .......... .......... .......... 194 GAAATGCAGT CTATTTCTCA AGTAAAAAAA GGGACTGAAA TTTTCTTGAA TTAGTTAAGT 103347 .......... .......... .......... .......... .......... .......... 194 AACATCTGGC TTCAGAAAGC AACCAGACAA ATTAACTAGT CGACTGAAAA ATTGGAAAAT 103287 .......... .......... .......... .......... .......... .......... 194 AGGATGTAAA GTCCGTCCAC AAAATAATTG GTAAAACCTG AAATCTGTCA TGTATCTGCT 103227 .......... .......... .......... .......... .......... .......... 194 CTTGTACTCT GAAGAGCACA TGATTGCAAA TGGTATTACG TAATGCTTTC AGTTTTTGAA 103167 .......... .......... .......... .......... .......... .......... 194 GCTACGCACT TGATGATCCG ATAAATTTTT CTCTCAAGTA ATACAAGTTA AGTCTCAAGT 103107 .......... .......... .......... .......... .......... .......... 194 TGAAAACTTT TGTTGGTCTG TTAAACGATT GCTTGTGGCT TTTAATGTAT ATGCAGGTAC 103047 |||| .......... .......... .......... .......... .......... ......GTAC 198 GAGAGGCTCA AGTGGCACAA TATAACTATA TTCTGGTTGT TGGAGAGGCT GAAGCCAGTA 102987 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGAGGCTCA AGTGGCACAA TATAACTATA TTCTGGTTGT TGGAGAGGCT GAAGCCAGTA 258 GTGGGCAGGT ATCTTATTTC CCCCCAACCT TCACTGCTTT TCCCCACAGC CTGCATTGCT 102927 |||||||| GTGGGCAG.. .......... .......... .......... .......... .......... 266 GTATCTCTTT TTAAAATGTG CAATTGAACA AACTAAAAAA AATATTCTGT ATCACTTTGG 102867 .......... .......... .......... .......... .......... .......... 266 TTCAGCTCAT CAGCTTTCTA AGGTTCTGAA ATAACCTTTG TCAAGAAAAG GTTCTGGCTG 102807 .......... .......... .......... .......... .......... .......... 266 ATAATTAACT TCTTGTATGT ACTGTTGTTT TGTATTGATT GAGATATTTT GTGGGTCACT 102747 .......... .......... .......... .......... .......... .......... 266 TGTTTGATTT CTTCTTGTTC CTCTTCTTCC AACTCCTATT ATTGATAAAG ATGTATATTA 102687 .......... .......... .......... .......... .......... .......... 266 TGCTAAACTT TCTGCAAATT ACTGATTTGT CTCTATCCCA CCCCGTGTGA AGAACTAGAA 102627 .......... .......... .......... .......... .......... .......... 266 AGAAAGGGCT TCCAGCATGA TTTGTGGGGG TTCATTGACA AATTCTCTTA CAGTAGCCCT 102567 .......... .......... .......... .......... .......... .......... 266 GGTAACAGAG ATGTTTTAGG AACAAAATCT CTTATGATAT CACCTATACG GTGTCTTCAG 102507 .......... .......... .......... .......... .......... .......... 266 TAGCAGCTAA ACAATTGAAA GTAATTGAAA CTGAATATTT CCCACCAAAA GATCAGTCCC 102447 .......... .......... .......... .......... .......... .......... 266 ATTATAACAT TCACATGAAG GAGCTTTGAG AATGTCAAAA CCATTTGATA GATTTAGTAG 102387 .......... .......... .......... .......... .......... .......... 266 CCAATCAGAT CACCTATGGC TGGATAATTC TGACTTTACT AGGCAAGATG TTTCTGCTTA 102327 .......... .......... .......... .......... .......... .......... 266 GCTGGTGATT GATTTGTTTG GGAAAAAAAT GTCTTATTTT GCTGGTTTGA TGGGGTGCCC 102267 .......... .......... .......... .......... .......... .......... 266 ATCAACTTTT GGTTGTCATT CCAAATACTC TGCTTAGTGA TGTTTTTGGT TGTCAGTTTC 102207 .......... .......... .......... .......... .......... .......... 266 CTAGGTTCAT GCCTCCACAT ATGATTTTCT TGTCTTCTCA TTTCAAATCT TGTAGCCAAG 102147 .......... .......... .......... .......... .......... .......... 266 TTTTACTGCT TTTTATTTTT GCTGAAAAAT ATGGTCTCTC TGTATGTGAA TGATTCTAGG 102087 | .......... .......... .......... .......... .......... .........G 267 TGAGTGTTCG AGTGAGAGAC AAACCTGATC ATCAAGTCAT GACGGTTGAC GTTCTCCTTG 102027 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAGTGTTCG AGTGAGAGAC AAACCTGATC ATCAAGTCAT GACGGTTGAC GTTCTCCTTG 327 CTCAGTTCAA AGATATGGTT GCATCATTTC AGTAAGAG 101989 |||||||||| |||||||| | |||||||||| |||||||| CTCAGTTCAA AGATATGGGT GCATCATTTC AGTAAGAG 365 hqPGS_C08HBa0336I24.1-_SGN-E231294+ (105386 105265,104140 104069,103050 102979,102087 101989) ******************************************************************************** EST sequence 308 +strand 568 n (File: SGN-E246513+) 1 AAAATTGATA TCACTGTTTC AGATGCAATG AAAAGGAAAT TTCAGTGTGC AACATTGCAG 61 CTTGATTTCC AACTTCCTCA ACGATTCAAC CTGTCATACT CAGCAGAAGA TGAAAGTAAG 121 AGGGAGAGAC CAGTTATGAT ACATAGAGCT ATACTTGGAT CAGTTGAGCG CATGTTCGCT 181 ATTCTCTTGG AGCATTTCAA GGGGAAATGG CCTTTCTGGC TTAGTCCACG TCAAGCGATG 241 GTCTGCCCTG TTTCCGACAA ATCTCTGTCG TATGCATTTG AGCTCCGGGA GCGGATACAT 301 GATGCTGGTT ATTATGTTGA TGTTGATACC AGTGACAGGA CAATCCAGAA AAAGGTACGC 361 GAAGCTCAAA TGGCACAATA TAACTATATT CTAGTTGTTG GAGAAGCTGA AGCCAGTAGT 421 GGGCAGGTGA GCGTTCGAGT GAGAAGCAAG TCTGATCATG AAGTCATGAC AGTTGACGGC 481 CTCCTCACTC ACTTCAAAGA TTTGGTCGCG TCATTTCAGT AGAGGAGTCA TTGTTTCTCT 541 TGCATTATAC CACTGAAGAG ATGTAGTA Predicted gene structure (within gDNA segment 106983 to 100967): Exon 1 105693 105634 ( 60 n); cDNA 1 60 ( 60 n); score: 0.900 Intron 1 105633 105487 ( 147 n); Pd: 0.990 (s: 0.88), Pa: 0.992 (s: 0.94) Exon 2 105486 105265 ( 222 n); cDNA 61 282 ( 222 n); score: 0.919 Intron 2 105264 104141 (1124 n); Pd: 0.999 (s: 0.86), Pa: 0.991 (s: 0.94) Exon 3 104140 104069 ( 72 n); cDNA 283 354 ( 72 n); score: 0.944 Intron 3 104068 103051 (1018 n); Pd: 0.988 (s: 0.94), Pa: 1.000 (s: 0.92) Exon 4 103050 102979 ( 72 n); cDNA 355 426 ( 72 n); score: 0.931 Intron 4 102978 102088 ( 891 n); Pd: 0.974 (s: 0.96), Pa: 0.999 (s: 0.86) Exon 5 102087 101996 ( 92 n); cDNA 427 518 ( 92 n); score: 0.837 MATCH C08HBa0336I24.1- SGN-E246513+ 0.907 518 0.912 C PGS_C08HBa0336I24.1-_SGN-E246513+ (105693 105634,105486 105265,104140 104069,103050 102979,102087 101996) Alignment (genomic DNA sequence = upper lines): AAAATTGATA TAAGTGTTTC TGATGCAATG AAGAGGAAAT TCCAGTGTGC GACATTGCAG 105634 |||||||||| | | |||||| ||||||||| || ||||||| | |||||||| ||||||||| AAAATTGATA TCACTGTTTC AGATGCAATG AAAAGGAAAT TTCAGTGTGC AACATTGCAG 60 GTCATATTTG TTCCTATTCT CCTTGGTTCA TTTTCACAAA CAATATCATT CTTTACCTTT 105574 .......... .......... .......... .......... .......... .......... 60 GAAATTCACC TACCTTGAAA TTGTTCTCAT GTTCTTTTGT ACCTTATTGG AAGTATCATC 105514 .......... .......... .......... .......... .......... .......... 60 TGAAATTCTG AATGCTGTGT TTTTCAGCTT GATTTCCAAC TCCCTCAACG TTTCAACCTA 105454 ||| |||||||||| | |||||||| |||||||| .......... .......... .......CTT GATTTCCAAC TTCCTCAACG ATTCAACCTG 93 TCATACTCAG CAGAAGATGA AAGTAAGAGA GAGAGACCAG TTATGATACA TAGAGCGATC 105394 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||| || TCATACTCAG CAGAAGATGA AAGTAAGAGG GAGAGACCAG TTATGATACA TAGAGCTATA 153 CTTGGGTCAG TTGAGCGTAT GTTCGCCATT CTTTTGGAGC ATTTCAAAGG GAAATGGCCT 105334 ||||| |||| ||||||| || |||||| ||| || ||||||| ||||||| || |||||||||| CTTGGATCAG TTGAGCGCAT GTTCGCTATT CTCTTGGAGC ATTTCAAGGG GAAATGGCCT 213 TTCTGGCTTA GTCCACGTCA AGCTATGGTC TGCCCTGTTT CTGACAAATC GCAGTCATAT 105274 |||||||||| |||||||||| ||| |||||| |||||||||| | |||||||| | ||| ||| TTCTGGCTTA GTCCACGTCA AGCGATGGTC TGCCCTGTTT CCGACAAATC TCTGTCGTAT 273 GCACTTAAGG TTAGTTACAT TTACGAACTT TCTCCTATTG ATGTATTAAT GTTTTAACTA 105214 ||| || || GCATTTGAG. .......... .......... .......... .......... .......... 282 TTTAAAGACT CCCTTCTCTG AATCCTTTCT GTGCATCTGA TTGGATGATA TTCCTTAGAT 105154 .......... .......... .......... .......... .......... .......... 282 TTTTTTAATT TTGGTGTAAT GTTATTACTG TTGGGCATGT CTCGTTCTTT TTATTCAACT 105094 .......... .......... .......... .......... .......... .......... 282 CAAAGGGTAC TCATGGTAGT TAGCGTTAGT TTTTCTTCTC TTATTTCTTT TCGTTCTTTA 105034 .......... .......... .......... .......... .......... .......... 282 TAGTAAGTAG TGTGATTTGT TGATGCCTTT TTTTAATAAC TAGGTATGTT GTTTTACTAA 104974 .......... .......... .......... .......... .......... .......... 282 TTAAAAGTAC CAAGAAGGTA CAACATAAGT AAAGCAAGAG AAGTTTATTG TTGATACCTG 104914 .......... .......... .......... .......... .......... .......... 282 TAGATTTAAA CTTCAATTTG TTAGTTACTA AGTAGGCTGG ATGTATGTAA TTTCTCAAAC 104854 .......... .......... .......... .......... .......... .......... 282 ACAGTAACAT GGTTGTACAG ATAGAATCTT TGAGGGGTAA AAAATACAAT ATAGGATTTT 104794 .......... .......... .......... .......... .......... .......... 282 GTGTTGACGT CTGCAATTGC ACTGTTGGTG TTGCCTTCAA AGCATGAAAC AGGGTTTAGA 104734 .......... .......... .......... .......... .......... .......... 282 AGTGCTGTAG ATTGTGCAGT TACAGATTTT GAGAAAATAA TTATAGGATT TTTTTGTTGG 104674 .......... .......... .......... .......... .......... .......... 282 CATCTACAAT TGCACTGGTT GGTGTTGTCT GCAAATCATG AAGAGTGATT GTGAAGTTCT 104614 .......... .......... .......... .......... .......... .......... 282 TTGAATTCAC AGAGTTGGTA GAACCTGCAT ACATGTAATT ATTGAAGATG CTGAGTAGAG 104554 .......... .......... .......... .......... .......... .......... 282 AAGTTGGGCA GTTGATAGGG AAGGGTAGCT TTTTGGCTCA GCTCCCATAT TTTGCCAACT 104494 .......... .......... .......... .......... .......... .......... 282 TCCTCGACAG GAAGATAAAG AAATGTATGT TGTTGAGGAT TATTGGAGCC CCAATAGGTC 104434 .......... .......... .......... .......... .......... .......... 282 ATGATCACTG TATATGTATC CTGCAGGGCA CATATAGTTT TTTTAGTAAG ACCACATTTT 104374 .......... .......... .......... .......... .......... .......... 282 TTTTGTTGAT TTAAGTCTAT TTTGAAGAAT ACGTGTGAAA CACCTTCACC CATGTGATGC 104314 .......... .......... .......... .......... .......... .......... 282 GTTGCAATGG AGGTACGTCC ATGTAAAAAA GGACATAATA TAAAAAAGTC AACTTGCCGA 104254 .......... .......... .......... .......... .......... .......... 282 TTGAGAAAAC ATAAATATGC TGAGTTTATT TACCAAATAT GCTTTCGTGA ATAATTTTGT 104194 .......... .......... .......... .......... .......... .......... 282 GTACTTAATC CATTGTGAAA ATTGCTTTAA CGTGTTGCTC TTCTTTTATT CAGCTCCGGG 104134 ||||||| .......... .......... .......... .......... .......... ...CTCCGGG 289 AGCAGATACA TGATGCTGGT TATTACGTTG ATGTTGATAC AAGTGACAGG ACAATTCAGA 104074 ||| |||||| |||||||||| ||||| |||| |||||||||| ||||||||| ||||| |||| AGCGGATACA TGATGCTGGT TATTATGTTG ATGTTGATAC CAGTGACAGG ACAATCCAGA 349 AAAAGGTTAG ATTCTTATTG TAGTATATCA TGTAAAATGC ATGATTGGTT CACTTTATGA 104014 ||||| AAAAG..... .......... .......... .......... .......... .......... 354 GGGTCACTAG CATTTTTCCT ATATGATCTC ATTATAGTTT ACAGTAACAT TTAGGGGTCC 103954 .......... .......... .......... .......... .......... .......... 354 AAGGACCAAG TACAGTGAGT TCCTCTGTTT TCTGGGGGAA GTTTATCTTA CAGAAGGAAA 103894 .......... .......... .......... .......... .......... .......... 354 TAAGGGTCCA TTTGTAATAG TTACTCCATA AGACCTGGCA AGTTATGATC AAAAAGGGTC 103834 .......... .......... .......... .......... .......... .......... 354 CACCAGTTAT GTCACTTAAC CTCACCAATC TGTGCAGAGC ACTATTGAAA TCATTAGGAT 103774 .......... .......... .......... .......... .......... .......... 354 GGTCAATATG ATCGTATAAT TGGTCATGGG GAAAATATCA TAGTGCCCTA CAGATTTGTG 103714 .......... .......... .......... .......... .......... .......... 354 TTCATTTCAG CAATGGACAA ATTTTATCAA TTTTTCCATT TAAGTTTATA AACCTATATC 103654 .......... .......... .......... .......... .......... .......... 354 TATGTGAAAA CTCACCTATG CAGTGTGACA TAGTTTAGGT CATTTTACCA TTTAGTCCAT 103594 .......... .......... .......... .......... .......... .......... 354 GACATAAGAG ATCAAATCCT TTTTAACTGT GACCATTATG GTTTGTACGC CATTTTGTTG 103534 .......... .......... .......... .......... .......... .......... 354 AGGTTGTATT AATATATCAA CATATGTCAA TTGTGCTTAC CTACTTTGTG ACTGGATACT 103474 .......... .......... .......... .......... .......... .......... 354 AACATACAAA GGATTGGCAA AAATTGCCAT TCTCTTGAAG CCAGATGTTG CTTAGACAAA 103414 .......... .......... .......... .......... .......... .......... 354 TTCAAGAGAA ATGCAGTCTA TTTCTCAAGT AAAAAAAGGG ACTGAAATTT TCTTGAATTA 103354 .......... .......... .......... .......... .......... .......... 354 GTTAAGTAAC ATCTGGCTTC AGAAAGCAAC CAGACAAATT AACTAGTCGA CTGAAAAATT 103294 .......... .......... .......... .......... .......... .......... 354 GGAAAATAGG ATGTAAAGTC CGTCCACAAA ATAATTGGTA AAACCTGAAA TCTGTCATGT 103234 .......... .......... .......... .......... .......... .......... 354 ATCTGCTCTT GTACTCTGAA GAGCACATGA TTGCAAATGG TATTACGTAA TGCTTTCAGT 103174 .......... .......... .......... .......... .......... .......... 354 TTTTGAAGCT ACGCACTTGA TGATCCGATA AATTTTTCTC TCAAGTAATA CAAGTTAAGT 103114 .......... .......... .......... .......... .......... .......... 354 CTCAAGTTGA AAACTTTTGT TGGTCTGTTA AACGATTGCT TGTGGCTTTT AATGTATATG 103054 .......... .......... .......... .......... .......... .......... 354 CAGGTACGAG AGGCTCAAGT GGCACAATAT AACTATATTC TGGTTGTTGG AGAGGCTGAA 102994 ||||| | | |||||| | |||||||||| |||||||||| | |||||||| ||| |||||| ...GTACGCG AAGCTCAAAT GGCACAATAT AACTATATTC TAGTTGTTGG AGAAGCTGAA 411 GCCAGTAGTG GGCAGGTATC TTATTTCCCC CCAACCTTCA CTGCTTTTCC CCACAGCCTG 102934 |||||||||| ||||| GCCAGTAGTG GGCAG..... .......... .......... .......... .......... 426 CATTGCTGTA TCTCTTTTTA AAATGTGCAA TTGAACAAAC TAAAAAAAAT ATTCTGTATC 102874 .......... .......... .......... .......... .......... .......... 426 ACTTTGGTTC AGCTCATCAG CTTTCTAAGG TTCTGAAATA ACCTTTGTCA AGAAAAGGTT 102814 .......... .......... .......... .......... .......... .......... 426 CTGGCTGATA ATTAACTTCT TGTATGTACT GTTGTTTTGT ATTGATTGAG ATATTTTGTG 102754 .......... .......... .......... .......... .......... .......... 426 GGTCACTTGT TTGATTTCTT CTTGTTCCTC TTCTTCCAAC TCCTATTATT GATAAAGATG 102694 .......... .......... .......... .......... .......... .......... 426 TATATTATGC TAAACTTTCT GCAAATTACT GATTTGTCTC TATCCCACCC CGTGTGAAGA 102634 .......... .......... .......... .......... .......... .......... 426 ACTAGAAAGA AAGGGCTTCC AGCATGATTT GTGGGGGTTC ATTGACAAAT TCTCTTACAG 102574 .......... .......... .......... .......... .......... .......... 426 TAGCCCTGGT AACAGAGATG TTTTAGGAAC AAAATCTCTT ATGATATCAC CTATACGGTG 102514 .......... .......... .......... .......... .......... .......... 426 TCTTCAGTAG CAGCTAAACA ATTGAAAGTA ATTGAAACTG AATATTTCCC ACCAAAAGAT 102454 .......... .......... .......... .......... .......... .......... 426 CAGTCCCATT ATAACATTCA CATGAAGGAG CTTTGAGAAT GTCAAAACCA TTTGATAGAT 102394 .......... .......... .......... .......... .......... .......... 426 TTAGTAGCCA ATCAGATCAC CTATGGCTGG ATAATTCTGA CTTTACTAGG CAAGATGTTT 102334 .......... .......... .......... .......... .......... .......... 426 CTGCTTAGCT GGTGATTGAT TTGTTTGGGA AAAAAATGTC TTATTTTGCT GGTTTGATGG 102274 .......... .......... .......... .......... .......... .......... 426 GGTGCCCATC AACTTTTGGT TGTCATTCCA AATACTCTGC TTAGTGATGT TTTTGGTTGT 102214 .......... .......... .......... .......... .......... .......... 426 CAGTTTCCTA GGTTCATGCC TCCACATATG ATTTTCTTGT CTTCTCATTT CAAATCTTGT 102154 .......... .......... .......... .......... .......... .......... 426 AGCCAAGTTT TACTGCTTTT TATTTTTGCT GAAAAATATG GTCTCTCTGT ATGTGAATGA 102094 .......... .......... .......... .......... .......... .......... 426 TTCTAGGTGA GTGTTCGAGT GAGAGACAAA CCTGATCATC AAGTCATGAC GGTTGACGTT 102034 |||| | |||||||| |||| ||| |||||||| |||||||||| ||||||| ......GTGA GCGTTCGAGT GAGAAGCAAG TCTGATCATG AAGTCATGAC AGTTGACGGC 480 CTCCTTGCTC AGTTCAAAGA TATGGTTGCA TCATTTCA 101996 ||||| ||| | |||||||| | |||| || |||||||| CTCCTCACTC ACTTCAAAGA TTTGGTCGCG TCATTTCA 518 hqPGS_C08HBa0336I24.1-_SGN-E246513+ (105693 105634,105486 105265,104140 104069,103050 102979,102087 101996) ******************************************************************************** EST sequence 196 +strand 547 n (File: SGN-E341553+) 1 CTGCTCTTGC AGAAGCATTG AACGAGTTTG GGAAGCCGTG GGAGATCAAC GAAGGAGATG 61 GAGCATTTTA CGGTCCAAAA ATTGATATCA CTGTTTCAGA TGCAATGAAA AGGAAATTTC 121 AGTGTGCAAC ATTGCAGCTT GATTTCCAAC TTCCTCAACG ATTCAACCTG TCATACTCAG 181 CAGAAGATGA AAGTAAGAGG GAGAGACCAG TTATGATACA TAGAGCTATA CTTGGATCAG 241 TTGAGCGCAT GTTCGCTATT CTCTTGGAGC ATTTCAAGGG GAAATGGCCT TTCTGGCTTA 301 GTCCACGTCA AGCGATGGTC TGCCCTGTTT CCGACAAATC TCTGTCGTAT GCATTTGAGC 361 TCCGGGAGCG GATACATGAT GCTGGTTATT ATGTTGATGT TGATACCAGT GACAGGACAA 421 TCCAGAAAAA GGTACGCGAA GCTCAAATGG CACAATATAA CTATATTCTA GTTGTTGGAG 481 AAGCTGAAGC CAGTAGTGGG CAAGTGAGCG TTCGAGTGAG AAGCAAGTCT GATCATGAAG 541 TCATGAC Predicted gene structure (within gDNA segment 107753 to 101920): Exon 1 106260 106217 ( 44 n); cDNA 1 44 ( 44 n); score: 0.886 Intron 1 106216 105727 ( 490 n); Pd: 0.998 (s: 0.89), Pa: 0.948 (s: 0.88) Exon 2 105726 105634 ( 93 n); cDNA 45 137 ( 93 n); score: 0.892 Intron 2 105633 105487 ( 147 n); Pd: 0.990 (s: 0.88), Pa: 0.992 (s: 0.94) Exon 3 105486 105265 ( 222 n); cDNA 138 359 ( 222 n); score: 0.919 Intron 3 105264 104141 (1124 n); Pd: 0.999 (s: 0.86), Pa: 0.991 (s: 0.94) Exon 4 104140 104069 ( 72 n); cDNA 360 431 ( 72 n); score: 0.944 Intron 4 104068 103051 (1018 n); Pd: 0.988 (s: 0.94), Pa: 1.000 (s: 0.92) Exon 5 103050 102979 ( 72 n); cDNA 432 503 ( 72 n); score: 0.917 Intron 5 102978 102088 ( 891 n); Pd: 0.974 (s: 0.94), Pa: 0.999 (s: 0.86) Exon 6 102087 102044 ( 44 n); cDNA 504 547 ( 44 n); score: 0.864 MATCH C08HBa0336I24.1- SGN-E341553+ 0.917 547 1.000 C PGS_C08HBa0336I24.1-_SGN-E341553+ (106260 106217,105726 105634,105486 105265,104140 104069,103050 102979,102087 102044) Alignment (genomic DNA sequence = upper lines): CTGCTCTTTC TGAAGCATTG AACGAGCATG GGAAGCCCTG GGAGGTTTGC TATCAATTTT 106201 |||||||| | ||||||||| |||||| || ||||||| || |||| CTGCTCTTGC AGAAGCATTG AACGAGTTTG GGAAGCCGTG GGAG...... .......... 44 GTTGGATTTT AAAATGTGAA GTTGTCAGAC TGTTCTACAT TTAAAATGAC TGGACTCCCT 106141 .......... .......... .......... .......... .......... .......... 44 TTTTGCCGAT TAAAAAACAT TTGATTTACT CCTATTTTTG GTGCTTCTAT TTTTATTCAT 106081 .......... .......... .......... .......... .......... .......... 44 CCCAATTTAT GTGTCGACTC ACTCAATCAA TTTTCTTTTT TAGAAAATCT TCATTTAAAA 106021 .......... .......... .......... .......... .......... .......... 44 ATTACGTCAG ATCTCTTAAT ACTGGCACCA TTCTACTTGT TTTACGTGAA CACTATTTAA 105961 .......... .......... .......... .......... .......... .......... 44 GCTAATATCT TAGACTCCTT GAACAATCAA ATGTTGTAGT ATAGAATGAG ATGTAGGGAG 105901 .......... .......... .......... .......... .......... .......... 44 TACCTTTTTC GTGTTACCTG ACAGAAAAAG TGAGGATTGG GGTTGCTCCT CTTGCAATGT 105841 .......... .......... .......... .......... .......... .......... 44 TCCTGTTTAT CTATGGAAAA TTAGGTAGTC CCCGCGTATC AGTGTTTTTT TGGTTATTTT 105781 .......... .......... .......... .......... .......... .......... 44 GTTTTCTTAA TCTCTTTTAT CTTGCCTTTT AATTAAAGAA TCTCATTCAA TTAGATCAAT 105721 ||||| .......... .......... .......... .......... .......... ....ATCAAC 50 GAAGGAGACG GAGCATTTTA TGGCCCAAAA ATTGATATAA GTGTTTCTGA TGCAATGAAG 105661 |||||||| | |||||||||| || |||||| |||||||| | |||||| || ||||||||| GAAGGAGATG GAGCATTTTA CGGTCCAAAA ATTGATATCA CTGTTTCAGA TGCAATGAAA 110 AGGAAATTCC AGTGTGCGAC ATTGCAGGTC ATATTTGTTC CTATTCTCCT TGGTTCATTT 105601 |||||||| | ||||||| || ||||||| AGGAAATTTC AGTGTGCAAC ATTGCAG... .......... .......... .......... 137 TCACAAACAA TATCATTCTT TACCTTTGAA ATTCACCTAC CTTGAAATTG TTCTCATGTT 105541 .......... .......... .......... .......... .......... .......... 137 CTTTTGTACC TTATTGGAAG TATCATCTGA AATTCTGAAT GCTGTGTTTT TCAGCTTGAT 105481 |||||| .......... .......... .......... .......... .......... ....CTTGAT 143 TTCCAACTCC CTCAACGTTT CAACCTATCA TACTCAGCAG AAGATGAAAG TAAGAGAGAG 105421 |||||||| | ||||||| || |||||| ||| |||||||||| |||||||||| |||||| ||| TTCCAACTTC CTCAACGATT CAACCTGTCA TACTCAGCAG AAGATGAAAG TAAGAGGGAG 203 AGACCAGTTA TGATACATAG AGCGATCCTT GGGTCAGTTG AGCGTATGTT CGCCATTCTT 105361 |||||||||| |||||||||| ||| || ||| || ||||||| |||| ||||| ||| ||||| AGACCAGTTA TGATACATAG AGCTATACTT GGATCAGTTG AGCGCATGTT CGCTATTCTC 263 TTGGAGCATT TCAAAGGGAA ATGGCCTTTC TGGCTTAGTC CACGTCAAGC TATGGTCTGC 105301 |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| ||||||||| TTGGAGCATT TCAAGGGGAA ATGGCCTTTC TGGCTTAGTC CACGTCAAGC GATGGTCTGC 323 CCTGTTTCTG ACAAATCGCA GTCATATGCA CTTAAGGTTA GTTACATTTA CGAACTTTCT 105241 |||||||| | ||||||| | ||| |||||| || || CCTGTTTCCG ACAAATCTCT GTCGTATGCA TTTGAG.... .......... .......... 359 CCTATTGATG TATTAATGTT TTAACTATTT AAAGACTCCC TTCTCTGAAT CCTTTCTGTG 105181 .......... .......... .......... .......... .......... .......... 359 CATCTGATTG GATGATATTC CTTAGATTTT TTTAATTTTG GTGTAATGTT ATTACTGTTG 105121 .......... .......... .......... .......... .......... .......... 359 GGCATGTCTC GTTCTTTTTA TTCAACTCAA AGGGTACTCA TGGTAGTTAG CGTTAGTTTT 105061 .......... .......... .......... .......... .......... .......... 359 TCTTCTCTTA TTTCTTTTCG TTCTTTATAG TAAGTAGTGT GATTTGTTGA TGCCTTTTTT 105001 .......... .......... .......... .......... .......... .......... 359 TAATAACTAG GTATGTTGTT TTACTAATTA AAAGTACCAA GAAGGTACAA CATAAGTAAA 104941 .......... .......... .......... .......... .......... .......... 359 GCAAGAGAAG TTTATTGTTG ATACCTGTAG ATTTAAACTT CAATTTGTTA GTTACTAAGT 104881 .......... .......... .......... .......... .......... .......... 359 AGGCTGGATG TATGTAATTT CTCAAACACA GTAACATGGT TGTACAGATA GAATCTTTGA 104821 .......... .......... .......... .......... .......... .......... 359 GGGGTAAAAA ATACAATATA GGATTTTGTG TTGACGTCTG CAATTGCACT GTTGGTGTTG 104761 .......... .......... .......... .......... .......... .......... 359 CCTTCAAAGC ATGAAACAGG GTTTAGAAGT GCTGTAGATT GTGCAGTTAC AGATTTTGAG 104701 .......... .......... .......... .......... .......... .......... 359 AAAATAATTA TAGGATTTTT TTGTTGGCAT CTACAATTGC ACTGGTTGGT GTTGTCTGCA 104641 .......... .......... .......... .......... .......... .......... 359 AATCATGAAG AGTGATTGTG AAGTTCTTTG AATTCACAGA GTTGGTAGAA CCTGCATACA 104581 .......... .......... .......... .......... .......... .......... 359 TGTAATTATT GAAGATGCTG AGTAGAGAAG TTGGGCAGTT GATAGGGAAG GGTAGCTTTT 104521 .......... .......... .......... .......... .......... .......... 359 TGGCTCAGCT CCCATATTTT GCCAACTTCC TCGACAGGAA GATAAAGAAA TGTATGTTGT 104461 .......... .......... .......... .......... .......... .......... 359 TGAGGATTAT TGGAGCCCCA ATAGGTCATG ATCACTGTAT ATGTATCCTG CAGGGCACAT 104401 .......... .......... .......... .......... .......... .......... 359 ATAGTTTTTT TAGTAAGACC ACATTTTTTT TGTTGATTTA AGTCTATTTT GAAGAATACG 104341 .......... .......... .......... .......... .......... .......... 359 TGTGAAACAC CTTCACCCAT GTGATGCGTT GCAATGGAGG TACGTCCATG TAAAAAAGGA 104281 .......... .......... .......... .......... .......... .......... 359 CATAATATAA AAAAGTCAAC TTGCCGATTG AGAAAACATA AATATGCTGA GTTTATTTAC 104221 .......... .......... .......... .......... .......... .......... 359 CAAATATGCT TTCGTGAATA ATTTTGTGTA CTTAATCCAT TGTGAAAATT GCTTTAACGT 104161 .......... .......... .......... .......... .......... .......... 359 GTTGCTCTTC TTTTATTCAG CTCCGGGAGC AGATACATGA TGCTGGTTAT TACGTTGATG 104101 |||||||||| ||||||||| |||||||||| || ||||||| .......... .......... CTCCGGGAGC GGATACATGA TGCTGGTTAT TATGTTGATG 399 TTGATACAAG TGACAGGACA ATTCAGAAAA AGGTTAGATT CTTATTGTAG TATATCATGT 104041 ||||||| || |||||||||| || ||||||| || TTGATACCAG TGACAGGACA ATCCAGAAAA AG........ .......... .......... 431 AAAATGCATG ATTGGTTCAC TTTATGAGGG TCACTAGCAT TTTTCCTATA TGATCTCATT 103981 .......... .......... .......... .......... .......... .......... 431 ATAGTTTACA GTAACATTTA GGGGTCCAAG GACCAAGTAC AGTGAGTTCC TCTGTTTTCT 103921 .......... .......... .......... .......... .......... .......... 431 GGGGGAAGTT TATCTTACAG AAGGAAATAA GGGTCCATTT GTAATAGTTA CTCCATAAGA 103861 .......... .......... .......... .......... .......... .......... 431 CCTGGCAAGT TATGATCAAA AAGGGTCCAC CAGTTATGTC ACTTAACCTC ACCAATCTGT 103801 .......... .......... .......... .......... .......... .......... 431 GCAGAGCACT ATTGAAATCA TTAGGATGGT CAATATGATC GTATAATTGG TCATGGGGAA 103741 .......... .......... .......... .......... .......... .......... 431 AATATCATAG TGCCCTACAG ATTTGTGTTC ATTTCAGCAA TGGACAAATT TTATCAATTT 103681 .......... .......... .......... .......... .......... .......... 431 TTCCATTTAA GTTTATAAAC CTATATCTAT GTGAAAACTC ACCTATGCAG TGTGACATAG 103621 .......... .......... .......... .......... .......... .......... 431 TTTAGGTCAT TTTACCATTT AGTCCATGAC ATAAGAGATC AAATCCTTTT TAACTGTGAC 103561 .......... .......... .......... .......... .......... .......... 431 CATTATGGTT TGTACGCCAT TTTGTTGAGG TTGTATTAAT ATATCAACAT ATGTCAATTG 103501 .......... .......... .......... .......... .......... .......... 431 TGCTTACCTA CTTTGTGACT GGATACTAAC ATACAAAGGA TTGGCAAAAA TTGCCATTCT 103441 .......... .......... .......... .......... .......... .......... 431 CTTGAAGCCA GATGTTGCTT AGACAAATTC AAGAGAAATG CAGTCTATTT CTCAAGTAAA 103381 .......... .......... .......... .......... .......... .......... 431 AAAAGGGACT GAAATTTTCT TGAATTAGTT AAGTAACATC TGGCTTCAGA AAGCAACCAG 103321 .......... .......... .......... .......... .......... .......... 431 ACAAATTAAC TAGTCGACTG AAAAATTGGA AAATAGGATG TAAAGTCCGT CCACAAAATA 103261 .......... .......... .......... .......... .......... .......... 431 ATTGGTAAAA CCTGAAATCT GTCATGTATC TGCTCTTGTA CTCTGAAGAG CACATGATTG 103201 .......... .......... .......... .......... .......... .......... 431 CAAATGGTAT TACGTAATGC TTTCAGTTTT TGAAGCTACG CACTTGATGA TCCGATAAAT 103141 .......... .......... .......... .......... .......... .......... 431 TTTTCTCTCA AGTAATACAA GTTAAGTCTC AAGTTGAAAA CTTTTGTTGG TCTGTTAAAC 103081 .......... .......... .......... .......... .......... .......... 431 GATTGCTTGT GGCTTTTAAT GTATATGCAG GTACGAGAGG CTCAAGTGGC ACAATATAAC 103021 ||||| || | ||||| |||| |||||||||| .......... .......... .......... GTACGCGAAG CTCAAATGGC ACAATATAAC 461 TATATTCTGG TTGTTGGAGA GGCTGAAGCC AGTAGTGGGC AGGTATCTTA TTTCCCCCCA 102961 |||||||| | |||||||||| ||||||||| |||||||||| | TATATTCTAG TTGTTGGAGA AGCTGAAGCC AGTAGTGGGC AA........ .......... 503 ACCTTCACTG CTTTTCCCCA CAGCCTGCAT TGCTGTATCT CTTTTTAAAA TGTGCAATTG 102901 .......... .......... .......... .......... .......... .......... 503 AACAAACTAA AAAAAATATT CTGTATCACT TTGGTTCAGC TCATCAGCTT TCTAAGGTTC 102841 .......... .......... .......... .......... .......... .......... 503 TGAAATAACC TTTGTCAAGA AAAGGTTCTG GCTGATAATT AACTTCTTGT ATGTACTGTT 102781 .......... .......... .......... .......... .......... .......... 503 GTTTTGTATT GATTGAGATA TTTTGTGGGT CACTTGTTTG ATTTCTTCTT GTTCCTCTTC 102721 .......... .......... .......... .......... .......... .......... 503 TTCCAACTCC TATTATTGAT AAAGATGTAT ATTATGCTAA ACTTTCTGCA AATTACTGAT 102661 .......... .......... .......... .......... .......... .......... 503 TTGTCTCTAT CCCACCCCGT GTGAAGAACT AGAAAGAAAG GGCTTCCAGC ATGATTTGTG 102601 .......... .......... .......... .......... .......... .......... 503 GGGGTTCATT GACAAATTCT CTTACAGTAG CCCTGGTAAC AGAGATGTTT TAGGAACAAA 102541 .......... .......... .......... .......... .......... .......... 503 ATCTCTTATG ATATCACCTA TACGGTGTCT TCAGTAGCAG CTAAACAATT GAAAGTAATT 102481 .......... .......... .......... .......... .......... .......... 503 GAAACTGAAT ATTTCCCACC AAAAGATCAG TCCCATTATA ACATTCACAT GAAGGAGCTT 102421 .......... .......... .......... .......... .......... .......... 503 TGAGAATGTC AAAACCATTT GATAGATTTA GTAGCCAATC AGATCACCTA TGGCTGGATA 102361 .......... .......... .......... .......... .......... .......... 503 ATTCTGACTT TACTAGGCAA GATGTTTCTG CTTAGCTGGT GATTGATTTG TTTGGGAAAA 102301 .......... .......... .......... .......... .......... .......... 503 AAATGTCTTA TTTTGCTGGT TTGATGGGGT GCCCATCAAC TTTTGGTTGT CATTCCAAAT 102241 .......... .......... .......... .......... .......... .......... 503 ACTCTGCTTA GTGATGTTTT TGGTTGTCAG TTTCCTAGGT TCATGCCTCC ACATATGATT 102181 .......... .......... .......... .......... .......... .......... 503 TTCTTGTCTT CTCATTTCAA ATCTTGTAGC CAAGTTTTAC TGCTTTTTAT TTTTGCTGAA 102121 .......... .......... .......... .......... .......... .......... 503 AAATATGGTC TCTCTGTATG TGAATGATTC TAGGTGAGTG TTCGAGTGAG AGACAAACCT 102061 ||||| | |||||||||| | ||| || .......... .......... .......... ...GTGAGCG TTCGAGTGAG AAGCAAGTCT 530 GATCATCAAG TCATGAC 102044 |||||| ||| ||||||| GATCATGAAG TCATGAC 547 hqPGS_C08HBa0336I24.1-_SGN-E341553+ (106260 106217,105726 105634,105486 105265,104140 104069,103050 102979,102087 102044) ******************************************************************************** EST sequence 284 +strand 589 n (File: SGN-E290606+) 1 TAGAGTTCAT CAACTATGTG TATAAGATAT TTGGTTTCAC TTTTGACCTG AAGTTATCAA 61 CAAGGCCTGA AAAATTTCTT GGAGACATAT CAACTTGGGT AAAGGCTGAA GCTGCGCTTT 121 CTGAAGCATT GAACGAGCAT GGGAAGCCCT GGGAGATCAA TGAAGGAGAC GGAGCATTTT 181 ATGGCCCAAA AATTGATATA AGTGTTTCTG ATGCAATGAA GAGGAAATTC CAGTGTGCGA 241 CATTGCAGCT TGATTTCCAA CTCCCTCAAC GTTTCAACCT ATCATACTCA GCAGAAGATG 301 AAAGTAAGAG AGAGAGACCA GTTATGATAC ATAGAGCGAT CCTTGGGTCA GTTGAGCGTA 361 TGTTCGCCAT TCTTTTGGAG CATTTCAAAG GGAAATGGCC TTTCTGGCTT AGTCCACGTC 421 AAGCTATGGT CTGCCCTGTT TCTGACAAAT CGCAGTCATA TGCACTTAAG CTCCGGGAGC 481 AGATACATGA TGCTGGTTAT TACGTTGATG TTGATACAAG TGACAGGACA ATTCATAAAA 541 AGGTACGAGA GGCTCAAGTG GCACAATATA ACTATATTCT GGTTGTTGG Predicted gene structure (within gDNA segment 107289 to 102394): Exon 1 106572 106511 ( 62 n); cDNA 1 62 ( 62 n); score: 0.984 Intron 1 106510 106310 ( 201 n); Pd: 0.219 (s: 0.98), Pa: 0.985 (s: 0.98) Exon 2 106309 106217 ( 93 n); cDNA 63 155 ( 93 n); score: 0.978 Intron 2 106216 105727 ( 490 n); Pd: 0.998 (s: 0.98), Pa: 0.948 (s: 1.00) Exon 3 105726 105634 ( 93 n); cDNA 156 248 ( 93 n); score: 1.000 Intron 3 105633 105487 ( 147 n); Pd: 0.990 (s: 1.00), Pa: 0.992 (s: 1.00) Exon 4 105486 105265 ( 222 n); cDNA 249 470 ( 222 n); score: 1.000 Intron 4 105264 104141 (1124 n); Pd: 0.999 (s: 1.00), Pa: 0.991 (s: 1.00) Exon 5 104140 104069 ( 72 n); cDNA 471 542 ( 72 n); score: 0.986 Intron 5 104068 103051 (1018 n); Pd: 0.988 (s: 0.98), Pa: 1.000 (s: 1.00) Exon 6 103050 103004 ( 47 n); cDNA 543 589 ( 47 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E290606+ 0.993 589 1.000 C PGS_C08HBa0336I24.1-_SGN-E290606+ (106572 106511,106309 106217,105726 105634,105486 105265,104140 104069,103050 103004) Alignment (genomic DNA sequence = upper lines): TAGAGTTCAT CAGCTATGTG TATAAGATAT TTGGTTTCAC TTTTGACCTG AAGTTATCAA 106513 |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGAGTTCAT CAACTATGTG TATAAGATAT TTGGTTTCAC TTTTGACCTG AAGTTATCAA 60 CAGTACTACT TCATCTATTC CATTGTCCTT CAATTTTTTT TTACGCGATT TCAGCTGATA 106453 || CA........ .......... .......... .......... .......... .......... 62 TTGATACTAC ATGCATTTAT TATTTTATTA GTCATTACAG ATACACCCTT AATATGGAAC 106393 .......... .......... .......... .......... .......... .......... 62 ATTCATGTTG TGAATGTTTT TCATATTTTC CACATGCGTA CATTCTCTTT CCATGTATAC 106333 .......... .......... .......... .......... .......... .......... 62 CAACACATAT TTCTGACTTG CAGAGGCCTG AAAAATTTCT TGGAGACATA GCAACTTGGG 106273 ||||||| |||||||||| |||||||||| ||||||||| .......... .......... ...AGGCCTG AAAAATTTCT TGGAGACATA TCAACTTGGG 99 TAAAGGCTGA AGCTGCTCTT TCTGAAGCAT TGAACGAGCA TGGGAAGCCC TGGGAGGTTT 106213 |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| |||||| TAAAGGCTGA AGCTGCGCTT TCTGAAGCAT TGAACGAGCA TGGGAAGCCC TGGGAG.... 155 GCTATCAATT TTGTTGGATT TTAAAATGTG AAGTTGTCAG ACTGTTCTAC ATTTAAAATG 106153 .......... .......... .......... .......... .......... .......... 155 ACTGGACTCC CTTTTTGCCG ATTAAAAAAC ATTTGATTTA CTCCTATTTT TGGTGCTTCT 106093 .......... .......... .......... .......... .......... .......... 155 ATTTTTATTC ATCCCAATTT ATGTGTCGAC TCACTCAATC AATTTTCTTT TTTAGAAAAT 106033 .......... .......... .......... .......... .......... .......... 155 CTTCATTTAA AAATTACGTC AGATCTCTTA ATACTGGCAC CATTCTACTT GTTTTACGTG 105973 .......... .......... .......... .......... .......... .......... 155 AACACTATTT AAGCTAATAT CTTAGACTCC TTGAACAATC AAATGTTGTA GTATAGAATG 105913 .......... .......... .......... .......... .......... .......... 155 AGATGTAGGG AGTACCTTTT TCGTGTTACC TGACAGAAAA AGTGAGGATT GGGGTTGCTC 105853 .......... .......... .......... .......... .......... .......... 155 CTCTTGCAAT GTTCCTGTTT ATCTATGGAA AATTAGGTAG TCCCCGCGTA TCAGTGTTTT 105793 .......... .......... .......... .......... .......... .......... 155 TTTGGTTATT TTGTTTTCTT AATCTCTTTT ATCTTGCCTT TTAATTAAAG AATCTCATTC 105733 .......... .......... .......... .......... .......... .......... 155 AATTAGATCA ATGAAGGAGA CGGAGCATTT TATGGCCCAA AAATTGATAT AAGTGTTTCT 105673 |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ......ATCA ATGAAGGAGA CGGAGCATTT TATGGCCCAA AAATTGATAT AAGTGTTTCT 209 GATGCAATGA AGAGGAAATT CCAGTGTGCG ACATTGCAGG TCATATTTGT TCCTATTCTC 105613 |||||||||| |||||||||| |||||||||| ||||||||| GATGCAATGA AGAGGAAATT CCAGTGTGCG ACATTGCAG. .......... .......... 248 CTTGGTTCAT TTTCACAAAC AATATCATTC TTTACCTTTG AAATTCACCT ACCTTGAAAT 105553 .......... .......... .......... .......... .......... .......... 248 TGTTCTCATG TTCTTTTGTA CCTTATTGGA AGTATCATCT GAAATTCTGA ATGCTGTGTT 105493 .......... .......... .......... .......... .......... .......... 248 TTTCAGCTTG ATTTCCAACT CCCTCAACGT TTCAACCTAT CATACTCAGC AGAAGATGAA 105433 |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ......CTTG ATTTCCAACT CCCTCAACGT TTCAACCTAT CATACTCAGC AGAAGATGAA 302 AGTAAGAGAG AGAGACCAGT TATGATACAT AGAGCGATCC TTGGGTCAGT TGAGCGTATG 105373 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTAAGAGAG AGAGACCAGT TATGATACAT AGAGCGATCC TTGGGTCAGT TGAGCGTATG 362 TTCGCCATTC TTTTGGAGCA TTTCAAAGGG AAATGGCCTT TCTGGCTTAG TCCACGTCAA 105313 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCGCCATTC TTTTGGAGCA TTTCAAAGGG AAATGGCCTT TCTGGCTTAG TCCACGTCAA 422 GCTATGGTCT GCCCTGTTTC TGACAAATCG CAGTCATATG CACTTAAGGT TAGTTACATT 105253 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| GCTATGGTCT GCCCTGTTTC TGACAAATCG CAGTCATATG CACTTAAG.. .......... 470 TACGAACTTT CTCCTATTGA TGTATTAATG TTTTAACTAT TTAAAGACTC CCTTCTCTGA 105193 .......... .......... .......... .......... .......... .......... 470 ATCCTTTCTG TGCATCTGAT TGGATGATAT TCCTTAGATT TTTTTAATTT TGGTGTAATG 105133 .......... .......... .......... .......... .......... .......... 470 TTATTACTGT TGGGCATGTC TCGTTCTTTT TATTCAACTC AAAGGGTACT CATGGTAGTT 105073 .......... .......... .......... .......... .......... .......... 470 AGCGTTAGTT TTTCTTCTCT TATTTCTTTT CGTTCTTTAT AGTAAGTAGT GTGATTTGTT 105013 .......... .......... .......... .......... .......... .......... 470 GATGCCTTTT TTTAATAACT AGGTATGTTG TTTTACTAAT TAAAAGTACC AAGAAGGTAC 104953 .......... .......... .......... .......... .......... .......... 470 AACATAAGTA AAGCAAGAGA AGTTTATTGT TGATACCTGT AGATTTAAAC TTCAATTTGT 104893 .......... .......... .......... .......... .......... .......... 470 TAGTTACTAA GTAGGCTGGA TGTATGTAAT TTCTCAAACA CAGTAACATG GTTGTACAGA 104833 .......... .......... .......... .......... .......... .......... 470 TAGAATCTTT GAGGGGTAAA AAATACAATA TAGGATTTTG TGTTGACGTC TGCAATTGCA 104773 .......... .......... .......... .......... .......... .......... 470 CTGTTGGTGT TGCCTTCAAA GCATGAAACA GGGTTTAGAA GTGCTGTAGA TTGTGCAGTT 104713 .......... .......... .......... .......... .......... .......... 470 ACAGATTTTG AGAAAATAAT TATAGGATTT TTTTGTTGGC ATCTACAATT GCACTGGTTG 104653 .......... .......... .......... .......... .......... .......... 470 GTGTTGTCTG CAAATCATGA AGAGTGATTG TGAAGTTCTT TGAATTCACA GAGTTGGTAG 104593 .......... .......... .......... .......... .......... .......... 470 AACCTGCATA CATGTAATTA TTGAAGATGC TGAGTAGAGA AGTTGGGCAG TTGATAGGGA 104533 .......... .......... .......... .......... .......... .......... 470 AGGGTAGCTT TTTGGCTCAG CTCCCATATT TTGCCAACTT CCTCGACAGG AAGATAAAGA 104473 .......... .......... .......... .......... .......... .......... 470 AATGTATGTT GTTGAGGATT ATTGGAGCCC CAATAGGTCA TGATCACTGT ATATGTATCC 104413 .......... .......... .......... .......... .......... .......... 470 TGCAGGGCAC ATATAGTTTT TTTAGTAAGA CCACATTTTT TTTGTTGATT TAAGTCTATT 104353 .......... .......... .......... .......... .......... .......... 470 TTGAAGAATA CGTGTGAAAC ACCTTCACCC ATGTGATGCG TTGCAATGGA GGTACGTCCA 104293 .......... .......... .......... .......... .......... .......... 470 TGTAAAAAAG GACATAATAT AAAAAAGTCA ACTTGCCGAT TGAGAAAACA TAAATATGCT 104233 .......... .......... .......... .......... .......... .......... 470 GAGTTTATTT ACCAAATATG CTTTCGTGAA TAATTTTGTG TACTTAATCC ATTGTGAAAA 104173 .......... .......... .......... .......... .......... .......... 470 TTGCTTTAAC GTGTTGCTCT TCTTTTATTC AGCTCCGGGA GCAGATACAT GATGCTGGTT 104113 |||||||| |||||||||| |||||||||| .......... .......... .......... ..CTCCGGGA GCAGATACAT GATGCTGGTT 498 ATTACGTTGA TGTTGATACA AGTGACAGGA CAATTCAGAA AAAGGTTAGA TTCTTATTGT 104053 |||||||||| |||||||||| |||||||||| ||||||| || |||| ATTACGTTGA TGTTGATACA AGTGACAGGA CAATTCATAA AAAG...... .......... 542 AGTATATCAT GTAAAATGCA TGATTGGTTC ACTTTATGAG GGTCACTAGC ATTTTTCCTA 103993 .......... .......... .......... .......... .......... .......... 542 TATGATCTCA TTATAGTTTA CAGTAACATT TAGGGGTCCA AGGACCAAGT ACAGTGAGTT 103933 .......... .......... .......... .......... .......... .......... 542 CCTCTGTTTT CTGGGGGAAG TTTATCTTAC AGAAGGAAAT AAGGGTCCAT TTGTAATAGT 103873 .......... .......... .......... .......... .......... .......... 542 TACTCCATAA GACCTGGCAA GTTATGATCA AAAAGGGTCC ACCAGTTATG TCACTTAACC 103813 .......... .......... .......... .......... .......... .......... 542 TCACCAATCT GTGCAGAGCA CTATTGAAAT CATTAGGATG GTCAATATGA TCGTATAATT 103753 .......... .......... .......... .......... .......... .......... 542 GGTCATGGGG AAAATATCAT AGTGCCCTAC AGATTTGTGT TCATTTCAGC AATGGACAAA 103693 .......... .......... .......... .......... .......... .......... 542 TTTTATCAAT TTTTCCATTT AAGTTTATAA ACCTATATCT ATGTGAAAAC TCACCTATGC 103633 .......... .......... .......... .......... .......... .......... 542 AGTGTGACAT AGTTTAGGTC ATTTTACCAT TTAGTCCATG ACATAAGAGA TCAAATCCTT 103573 .......... .......... .......... .......... .......... .......... 542 TTTAACTGTG ACCATTATGG TTTGTACGCC ATTTTGTTGA GGTTGTATTA ATATATCAAC 103513 .......... .......... .......... .......... .......... .......... 542 ATATGTCAAT TGTGCTTACC TACTTTGTGA CTGGATACTA ACATACAAAG GATTGGCAAA 103453 .......... .......... .......... .......... .......... .......... 542 AATTGCCATT CTCTTGAAGC CAGATGTTGC TTAGACAAAT TCAAGAGAAA TGCAGTCTAT 103393 .......... .......... .......... .......... .......... .......... 542 TTCTCAAGTA AAAAAAGGGA CTGAAATTTT CTTGAATTAG TTAAGTAACA TCTGGCTTCA 103333 .......... .......... .......... .......... .......... .......... 542 GAAAGCAACC AGACAAATTA ACTAGTCGAC TGAAAAATTG GAAAATAGGA TGTAAAGTCC 103273 .......... .......... .......... .......... .......... .......... 542 GTCCACAAAA TAATTGGTAA AACCTGAAAT CTGTCATGTA TCTGCTCTTG TACTCTGAAG 103213 .......... .......... .......... .......... .......... .......... 542 AGCACATGAT TGCAAATGGT ATTACGTAAT GCTTTCAGTT TTTGAAGCTA CGCACTTGAT 103153 .......... .......... .......... .......... .......... .......... 542 GATCCGATAA ATTTTTCTCT CAAGTAATAC AAGTTAAGTC TCAAGTTGAA AACTTTTGTT 103093 .......... .......... .......... .......... .......... .......... 542 GGTCTGTTAA ACGATTGCTT GTGGCTTTTA ATGTATATGC AGGTACGAGA GGCTCAAGTG 103033 |||||||| |||||||||| .......... .......... .......... .......... ..GTACGAGA GGCTCAAGTG 560 GCACAATATA ACTATATTCT GGTTGTTGG 103004 |||||||||| |||||||||| ||||||||| GCACAATATA ACTATATTCT GGTTGTTGG 589 hqPGS_C08HBa0336I24.1-_SGN-E290606+ (106572 106511,106309 106217,105726 105634,105486 105265,104140 104069,103050 103004) ******************************************************************************** EST sequence 65 +strand 881 n (File: SGN-E378170+) 1 TTTGCAACAA ACTGCTGGAA TTCATAAAGA GTCAGTATTG GAAGAGAGGC TACAAGGAGG 61 TTTGGAGTCC AAATATGTAC AACATGCAAT TGTGGGAGAC TTCTGGTCAT GCTGCAAATT 121 ACAAGGAGAA CATGTTTGTG TTTGAGATTG AAAAACAAGA ATTTGGGCTG AAGCCAATGA 181 ATTGCCCAGG TCATTGTTTG ATATTTGATC ACAGAGTTCG TTCTTACAGG GAGCTACCAC 241 TTCGTCTGGC TGACTTTGGA GTTCTACACA GGAATGAAGC CAGTGGTGCA CTCACTGGCT 301 TAACGCGTGT CAGGAGATTC CAGCAGGATG ATGCCCACAT CTTCTGCAGG GAGTCACAGA 361 TTAAGGAAGA AGTCAAGGGT GTCTTAGATT TCATTAGCTA TGTGTATGAG ATATTTGGTT 421 TCACTTTTAA CCTGAAGTTA TCAACGAGGC CTGAAAAATA TCTTGGGGAC TTGGAAAGTT 481 GGGAAAAGGC TGAAGCTGCT CTTGCANAAG CATTGAACGA GTTTGGGAAG CCGTGGGAGA 541 TCAACGAAGG AGATGGAGCA TTTTACGGTC CAAAAATTGA TATCACTGTT TCAGATGCAA 601 TGAAAAGGAA ATTTCAGTGT GCAACATTGC AGCTTGATTT CCAACTTCCT CAACGATTCA 661 ACCTGTCATA CTCAGCAGAA GATGAAAGTA AGAGGGAGAG ACCAGTTATG ATACATAGAG 721 CTATACTTGG ATCAGTTGAG CGCATGTTCG CTATTCTCTT GGAGCATTTC AGGGGGAAAT 781 GGCCTTTCTG GCTTATCCAC GTCAAGCGAT GGTCTGCCCT GTTTCGACAA ATCTCTGTCG 841 TATGCATTTG AGCTCCGGGA GCGGATCATG ATGCTGGTTA T Predicted gene structure (within gDNA segment 110540 to 103523): Exon 1 109368 109282 ( 87 n); cDNA 60 146 ( 87 n); score: 0.954 Intron 1 109281 107852 (1430 n); Pd: 0.991 (s: 0.98), Pa: 0.997 (s: 0.96) Exon 2 107851 107767 ( 85 n); cDNA 147 231 ( 85 n); score: 0.941 Intron 2 107766 107123 ( 644 n); Pd: 0.846 (s: 0.92), Pa: 0.849 (s: 0.92) Exon 3 107122 107028 ( 95 n); cDNA 232 326 ( 95 n); score: 0.926 Intron 3 107027 106712 ( 316 n); Pd: 1.000 (s: 0.92), Pa: 0.993 (s: 0) Exon 4 106711 106679 ( 33 n); cDNA 327 359 ( 33 n); score: 0.909 Intron 4 106678 106598 ( 81 n); Pd: 0.997 (s: 0), Pa: 0.989 (s: 0.90) Exon 5 106597 106511 ( 87 n); cDNA 360 446 ( 87 n); score: 0.920 Intron 5 106510 106310 ( 201 n); Pd: 0.219 (s: 0.94), Pa: 0.985 (s: 0.86) Exon 6 106309 106217 ( 93 n); cDNA 447 539 ( 93 n); score: 0.860 Intron 6 106216 105727 ( 490 n); Pd: 0.998 (s: 0.88), Pa: 0.948 (s: 0.88) Exon 7 105726 105634 ( 93 n); cDNA 540 632 ( 93 n); score: 0.892 Intron 7 105633 105487 ( 147 n); Pd: 0.990 (s: 0.88), Pa: 0.992 (s: 0.94) Exon 8 105486 105265 ( 222 n); cDNA 633 852 ( 220 n); score: 0.910 Intron 8 105264 104141 (1124 n); Pd: 0.999 (s: 0.86), Pa: 0.991 (s: 0) Exon 9 104140 104111 ( 30 n); cDNA 853 881 ( 29 n); score: 0.933 MATCH C08HBa0336I24.1- SGN-E378170+ 0.913 825 0.936 C PGS_C08HBa0336I24.1-_SGN-E378170+ (109368 109282,107851 107767,107122 107028,106711 106679,106597 106511,106309 106217,105726 105634,105486 105265,104140 104111) Alignment (genomic DNA sequence = upper lines): GTTTGGAGTC CAAATATGTA CAATATGCAG TTATGGGAAA CTTCTGGTCA TGCTGCAAAT 109309 |||||||||| |||||||||| ||| ||||| || ||||| | |||||||||| |||||||||| GTTTGGAGTC CAAATATGTA CAACATGCAA TTGTGGGAGA CTTCTGGTCA TGCTGCAAAT 119 TACAAGGAGA ACATGTTTGT GTTTGAGGTA AATTTGGCGC ACTAATAGCA GTTCTGATAT 109249 |||||||||| |||||||||| ||||||| TACAAGGAGA ACATGTTTGT GTTTGAG... .......... .......... .......... 146 TAATTGTGGT GTATCTGAAT AAGTTTTTCA TTTTTTTAAA AGCTCTAATT TTTGGATTAT 109189 .......... .......... .......... .......... .......... .......... 146 AGATTCTTCT AGGAGTATTT TATTATAAAG GCAACAAAGG AAAATTGTTG TTACTCAAAG 109129 .......... .......... .......... .......... .......... .......... 146 CACATATGTT TATCTCTCTT AGACTTTTGT TCTAAAGACA CAAATGAAAA GGAAGTCCAT 109069 .......... .......... .......... .......... .......... .......... 146 TTTCAAATGT AGATAGTGTA CAGAGATGCA TACTGCAGAT GGTTGCATTA CTCAGTCATT 109009 .......... .......... .......... .......... .......... .......... 146 GCACTCTCCG GGTGGCTATT ACATTTTTGA AAGGAGTAAT TATTTCCCGC AAGAGAAGCA 108949 .......... .......... .......... .......... .......... .......... 146 CTTCCCTTAT GTATAGAAAT CAGTGACGTA AAATTTATAA TCAACATAAA ACTCTAAAGT 108889 .......... .......... .......... .......... .......... .......... 146 TTGGTTCTGG TGAAGTAACT GGAGTTAAAT AATCCTACTA ACACTCATAT CAGAGGGTTG 108829 .......... .......... .......... .......... .......... .......... 146 GCTCCAAACA AATTTCTCGG TCATGAAAAA CACCCATATA AGAGAAAGAA TAGACATCCT 108769 .......... .......... .......... .......... .......... .......... 146 TATTTTTGGG GAAGGATTTT GGTTCCTATC AGTGAAATTT GGAATCATAG TTATAAGATG 108709 .......... .......... .......... .......... .......... .......... 146 AAAAAAATGA GTGGAAAATT ACTTATTAAA AAAGAAAACA GGGGTGATAC CAGCTTAGAT 108649 .......... .......... .......... .......... .......... .......... 146 GGATCGATTT AAGTGCTATA AGATGTAGAA GTATTTGCAA GGTGAAAGGA CTCTCCCGCG 108589 .......... .......... .......... .......... .......... .......... 146 AATTTATTAA AATAAATTTA CATTTATTGG TCACAACTTA GTGAGCAGTT TAGTCAAAAG 108529 .......... .......... .......... .......... .......... .......... 146 ATGAATCGGT ACAGGATTAA GACATATGAC TGTGAAATAT GTCGTTATAA ATGTGGTTTC 108469 .......... .......... .......... .......... .......... .......... 146 CAAACTAAAG CTTATATTTA AAGCTGATTT AATATATTTG TTCTGGATAA GCTTAAACAT 108409 .......... .......... .......... .......... .......... .......... 146 TATGTTCTTT ATGTTGAACG TTTCATGTTT CACTAAATTT CTAGTATGCT TGTTCTTTTA 108349 .......... .......... .......... .......... .......... .......... 146 TGAAGGGTTA ATATTATTGA TGTCAAAATT AGCACTAAGA AAGTGCTGTC ATTACATCCA 108289 .......... .......... .......... .......... .......... .......... 146 AAAGAGAACA GAAAAAAGGA AAGAAAAGGA GGAGTCCCAA GACTAGCATA TGCAAAAGCT 108229 .......... .......... .......... .......... .......... .......... 146 TCTAAGAACT GTAATTGGAG TTCCTAATCA TTTACTCATT CAATTTACAC CAAAAAGAAA 108169 .......... .......... .......... .......... .......... .......... 146 TAAAAAGATA ACAATCAGAT TTGCTCATAA ACTTGCAGGT TATTCAACTA GGATAGAAAT 108109 .......... .......... .......... .......... .......... .......... 146 GCCAGTTGCC AGATGATAAT TAGTAGAAAT AAGACAAACT TTCATTTATT TGAGATATCT 108049 .......... .......... .......... .......... .......... .......... 146 AGTTCTGACA AACAAGTTAG ATTTATGTTG TTTTTAGTCT TCCTTTATTT TTGTTGGACA 107989 .......... .......... .......... .......... .......... .......... 146 ATGCTGTTTA CATAAAAATT TGCACTTTTT CTAGCTAGGG TTATAGTATC TTTTCTTGCA 107929 .......... .......... .......... .......... .......... .......... 146 AGAGGTGGTG CCTCTGGCCG CTAATTTCAG CTAGATGCTT TCCTAATTAA AATGGTTCTT 107869 .......... .......... .......... .......... .......... .......... 146 GCTTCTTTGA CCTGCAGATT GAAAAGCAAG AATTTGGGCT GAAGCCAATG AACTGCCCAG 107809 ||| ||||| |||| |||||||||| |||||||||| || ||||||| .......... .......ATT GAAAAACAAG AATTTGGGCT GAAGCCAATG AATTGCCCAG 189 GTCATTGTTT AATATTTGAT CACAGGGTTC GTTCCTACAG GGGTGAGATT TTCCAACAGT 107749 |||||||||| ||||||||| ||||| |||| |||| ||||| || GTCATTGTTT GATATTTGAT CACAGAGTTC GTTCTTACAG GG........ .......... 231 TACTTTGCTT CTCCCAGCAG TTACTTTCCT TTTTTCTTGC TTTACTTGCA CGCTTTAGTT 107689 .......... .......... .......... .......... .......... .......... 231 GTAGCATTGG TCTTGCGTGC AATTTCTTGA AACTAATCAT GCAGGATATG AGATTTTTAT 107629 .......... .......... .......... .......... .......... .......... 231 GATAATATAG AGGACACTTG TATACTTGTA TGCGGATGTT TCCTTCCCTT ATTTATAAAA 107569 .......... .......... .......... .......... .......... .......... 231 TTTTATTTCT TTATCAGTAA AACATTAAGG ACACTTGACC ATGAAATGTT AGTGGTACTA 107509 .......... .......... .......... .......... .......... .......... 231 GTGTCTTTTG AAAACAAGGT CTGCATGCAT TCTGCCCTCT CTATACCCCA GTTGTGGGAT 107449 .......... .......... .......... .......... .......... .......... 231 TACACCAGAT ATGTTGTTGT TGGTATTATT CTAACATCAG TTGGTTATGA AGAAGCTCTA 107389 .......... .......... .......... .......... .......... .......... 231 TGCAGTGCAC CTTATTGAGG GGTGAAATTT GATGTAGATT TCTTATCTAA AAGGCAGATT 107329 .......... .......... .......... .......... .......... .......... 231 TTAGACATGC AACATATTCA CTCCAAATAT TGTCTTTTCA TAAAATCCAA GATCTTCTCA 107269 .......... .......... .......... .......... .......... .......... 231 TTATTTGTAC CAGCCTTTAG CAGTCTGCTG CATCATAGCC GACTTAGTTT CGTCTTTATA 107209 .......... .......... .......... .......... .......... .......... 231 GTGCCTCTAT CTATCTATCT ATCTAACTGA TGCCATTGAC ACTGCAAGCA ACACATGAAT 107149 .......... .......... .......... .......... .......... .......... 231 CATTAACTAA CTGTCCAACA ATGCAGAACT ACCACTTCGT CTGGCTGACT TTGGGGTTCT 107089 | || |||||||||| |||||||||| |||| ||||| .......... .......... ......AGCT ACCACTTCGT CTGGCTGACT TTGGAGTTCT 265 GCACAGGAAT GAGGCCAGTG GTGCACTTAC TGGCTTAACA CGTGTCAGGA GATTTCAGCA 107029 ||||||||| || ||||||| ||||||| || ||||||||| |||||||||| |||| ||||| ACACAGGAAT GAAGCCAGTG GTGCACTCAC TGGCTTAACG CGTGTCAGGA GATTCCAGCA 325 GGTATCACCT TTTTTGTTTC CTTTTCATCT TTTATGTATG ATCATGCTAG TGTTTTCCTC 106969 | G......... .......... .......... .......... .......... .......... 326 TAGGAGCATT AGTTATTTGT GTGATACGAA TATTCCTTGT TTCTTCCTGC ATAAGAAGCA 106909 .......... .......... .......... .......... .......... .......... 326 ACCTATAGGT TCTTAGGTCC TTTTATTCCA TGTTGTTTTT CACGTTGTTC AATTGGTGGT 106849 .......... .......... .......... .......... .......... .......... 326 TATATTTATT TGTTTTTTTC CATATCTGTG ATAATCTATT ATCAAGGAAC TTCCTCCTGT 106789 .......... .......... .......... .......... .......... .......... 326 AGAATCTGTT TTTAAAGAAC ATCTTAATAA CTCTGCTGTG CTAAAACAAC CTTTTTTATA 106729 .......... .......... .......... .......... .......... .......... 326 ACCCTATTCC TTCGCAGGAT GATGCACACA TCTTTTGCAG AGAGTCACAG GTTTGTTAAG 106669 ||| ||||| |||| |||| ||||| ||||||||| .......... .......GAT GATGCCCACA TCTTCTGCAG GGAGTCACAG .......... 359 ATTTATGATT ATGTGTAGAT AACATATGCA TTATTTAGAA CCTAGTTTAA CCTAAGTTCT 106609 .......... .......... .......... .......... .......... .......... 359 TCATGTTGCA GATTAAGGAT GAAGTCAAGG GCGTCTTAGA GTTCATCAGC TATGTGTATA 106549 |||||||| |||||||||| | |||||||| ||||| ||| ||||||||| .......... .ATTAAGGAA GAAGTCAAGG GTGTCTTAGA TTTCATTAGC TATGTGTATG 408 AGATATTTGG TTTCACTTTT GACCTGAAGT TATCAACAGT ACTACTTCAT CTATTCCATT 106489 |||||||||| |||||||||| ||||||||| ||||||| AGATATTTGG TTTCACTTTT AACCTGAAGT TATCAACG.. .......... .......... 446 GTCCTTCAAT TTTTTTTTAC GCGATTTCAG CTGATATTGA TACTACATGC ATTTATTATT 106429 .......... .......... .......... .......... .......... .......... 446 TTATTAGTCA TTACAGATAC ACCCTTAATA TGGAACATTC ATGTTGTGAA TGTTTTTCAT 106369 .......... .......... .......... .......... .......... .......... 446 ATTTTCCACA TGCGTACATT CTCTTTCCAT GTATACCAAC ACATATTTCT GACTTGCAGA 106309 | .......... .......... .......... .......... .......... .........A 447 GGCCTGAAAA ATTTCTTGGA GACATAGCAA CTTGGGTAAA GGCTGAAGCT GCTCTTTCTG 106249 |||||||||| || |||||| ||| | | || ||||| ||| |||||||||| |||||| | GGCCTGAAAA ATATCTTGGG GACTTGGAAA GTTGGGAAAA GGCTGAAGCT GCTCTTGCAN 507 AAGCATTGAA CGAGCATGGG AAGCCCTGGG AGGTTTGCTA TCAATTTTGT TGGATTTTAA 106189 |||||||||| |||| |||| ||||| |||| || AAGCATTGAA CGAGTTTGGG AAGCCGTGGG AG........ .......... .......... 539 AATGTGAAGT TGTCAGACTG TTCTACATTT AAAATGACTG GACTCCCTTT TTGCCGATTA 106129 .......... .......... .......... .......... .......... .......... 539 AAAAACATTT GATTTACTCC TATTTTTGGT GCTTCTATTT TTATTCATCC CAATTTATGT 106069 .......... .......... .......... .......... .......... .......... 539 GTCGACTCAC TCAATCAATT TTCTTTTTTA GAAAATCTTC ATTTAAAAAT TACGTCAGAT 106009 .......... .......... .......... .......... .......... .......... 539 CTCTTAATAC TGGCACCATT CTACTTGTTT TACGTGAACA CTATTTAAGC TAATATCTTA 105949 .......... .......... .......... .......... .......... .......... 539 GACTCCTTGA ACAATCAAAT GTTGTAGTAT AGAATGAGAT GTAGGGAGTA CCTTTTTCGT 105889 .......... .......... .......... .......... .......... .......... 539 GTTACCTGAC AGAAAAAGTG AGGATTGGGG TTGCTCCTCT TGCAATGTTC CTGTTTATCT 105829 .......... .......... .......... .......... .......... .......... 539 ATGGAAAATT AGGTAGTCCC CGCGTATCAG TGTTTTTTTG GTTATTTTGT TTTCTTAATC 105769 .......... .......... .......... .......... .......... .......... 539 TCTTTTATCT TGCCTTTTAA TTAAAGAATC TCATTCAATT AGATCAATGA AGGAGACGGA 105709 ||||| || |||||| ||| .......... .......... .......... .......... ..ATCAACGA AGGAGATGGA 557 GCATTTTATG GCCCAAAAAT TGATATAAGT GTTTCTGATG CAATGAAGAG GAAATTCCAG 105649 |||||||| | | |||||||| |||||| | | ||||| |||| ||||||| || |||||| ||| GCATTTTACG GTCCAAAAAT TGATATCACT GTTTCAGATG CAATGAAAAG GAAATTTCAG 617 TGTGCGACAT TGCAGGTCAT ATTTGTTCCT ATTCTCCTTG GTTCATTTTC ACAAACAATA 105589 ||||| |||| ||||| TGTGCAACAT TGCAG..... .......... .......... .......... .......... 632 TCATTCTTTA CCTTTGAAAT TCACCTACCT TGAAATTGTT CTCATGTTCT TTTGTACCTT 105529 .......... .......... .......... .......... .......... .......... 632 ATTGGAAGTA TCATCTGAAA TTCTGAATGC TGTGTTTTTC AGCTTGATTT CCAACTCCCT 105469 |||||||| |||||| ||| .......... .......... .......... .......... ..CTTGATTT CCAACTTCCT 650 CAACGTTTCA ACCTATCATA CTCAGCAGAA GATGAAAGTA AGAGAGAGAG ACCAGTTATG 105409 ||||| |||| |||| ||||| |||||||||| |||||||||| |||| ||||| |||||||||| CAACGATTCA ACCTGTCATA CTCAGCAGAA GATGAAAGTA AGAGGGAGAG ACCAGTTATG 710 ATACATAGAG CGATCCTTGG GTCAGTTGAG CGTATGTTCG CCATTCTTTT GGAGCATTTC 105349 |||||||||| | || ||||| ||||||||| || ||||||| | ||||| || |||||||||| ATACATAGAG CTATACTTGG ATCAGTTGAG CGCATGTTCG CTATTCTCTT GGAGCATTTC 770 AAAGGGAAAT GGCCTTTCTG GCTTAGTCCA CGTCAAGCTA TGGTCTGCCC TGTTTCTGAC 105289 | ||||||| |||||||||| ||||| |||| |||||||| | |||||||||| |||||| ||| AGGGGGAAAT GGCCTTTCTG GCTTA-TCCA CGTCAAGCGA TGGTCTGCCC TGTTTC-GAC 828 AAATCGCAGT CATATGCACT TAAGGTTAGT TACATTTACG AACTTTCTCC TATTGATGTA 105229 ||||| | || | |||||| | | || AAATCTCTGT CGTATGCATT TGAG...... .......... .......... .......... 852 TTAATGTTTT AACTATTTAA AGACTCCCTT CTCTGAATCC TTTCTGTGCA TCTGATTGGA 105169 .......... .......... .......... .......... .......... .......... 852 TGATATTCCT TAGATTTTTT TAATTTTGGT GTAATGTTAT TACTGTTGGG CATGTCTCGT 105109 .......... .......... .......... .......... .......... .......... 852 TCTTTTTATT CAACTCAAAG GGTACTCATG GTAGTTAGCG TTAGTTTTTC TTCTCTTATT 105049 .......... .......... .......... .......... .......... .......... 852 TCTTTTCGTT CTTTATAGTA AGTAGTGTGA TTTGTTGATG CCTTTTTTTA ATAACTAGGT 104989 .......... .......... .......... .......... .......... .......... 852 ATGTTGTTTT ACTAATTAAA AGTACCAAGA AGGTACAACA TAAGTAAAGC AAGAGAAGTT 104929 .......... .......... .......... .......... .......... .......... 852 TATTGTTGAT ACCTGTAGAT TTAAACTTCA ATTTGTTAGT TACTAAGTAG GCTGGATGTA 104869 .......... .......... .......... .......... .......... .......... 852 TGTAATTTCT CAAACACAGT AACATGGTTG TACAGATAGA ATCTTTGAGG GGTAAAAAAT 104809 .......... .......... .......... .......... .......... .......... 852 ACAATATAGG ATTTTGTGTT GACGTCTGCA ATTGCACTGT TGGTGTTGCC TTCAAAGCAT 104749 .......... .......... .......... .......... .......... .......... 852 GAAACAGGGT TTAGAAGTGC TGTAGATTGT GCAGTTACAG ATTTTGAGAA AATAATTATA 104689 .......... .......... .......... .......... .......... .......... 852 GGATTTTTTT GTTGGCATCT ACAATTGCAC TGGTTGGTGT TGTCTGCAAA TCATGAAGAG 104629 .......... .......... .......... .......... .......... .......... 852 TGATTGTGAA GTTCTTTGAA TTCACAGAGT TGGTAGAACC TGCATACATG TAATTATTGA 104569 .......... .......... .......... .......... .......... .......... 852 AGATGCTGAG TAGAGAAGTT GGGCAGTTGA TAGGGAAGGG TAGCTTTTTG GCTCAGCTCC 104509 .......... .......... .......... .......... .......... .......... 852 CATATTTTGC CAACTTCCTC GACAGGAAGA TAAAGAAATG TATGTTGTTG AGGATTATTG 104449 .......... .......... .......... .......... .......... .......... 852 GAGCCCCAAT AGGTCATGAT CACTGTATAT GTATCCTGCA GGGCACATAT AGTTTTTTTA 104389 .......... .......... .......... .......... .......... .......... 852 GTAAGACCAC ATTTTTTTTG TTGATTTAAG TCTATTTTGA AGAATACGTG TGAAACACCT 104329 .......... .......... .......... .......... .......... .......... 852 TCACCCATGT GATGCGTTGC AATGGAGGTA CGTCCATGTA AAAAAGGACA TAATATAAAA 104269 .......... .......... .......... .......... .......... .......... 852 AAGTCAACTT GCCGATTGAG AAAACATAAA TATGCTGAGT TTATTTACCA AATATGCTTT 104209 .......... .......... .......... .......... .......... .......... 852 CGTGAATAAT TTTGTGTACT TAATCCATTG TGAAAATTGC TTTAACGTGT TGCTCTTCTT 104149 .......... .......... .......... .......... .......... .......... 852 TTATTCAGCT CCGGGAGCAG ATACATGATG CTGGTTAT 104111 || |||||||| | || ||||||| |||||||| ........CT CCGGGAGCGG AT-CATGATG CTGGTTAT 881 hqPGS_C08HBa0336I24.1-_SGN-E378170+ (109368 109282,107851 107767,107122 107028,106711 106679,106597 106511,106309 106217,105726 105634,105486 105265,104140 104111) ******************************************************************************** EST sequence 303 +strand 500 n (File: SGN-E207964+) 1 AGATTCCAGC AGGATGATGC CCACATCTTC TGCAGGGAGT CACAGATTAA GGAAGAAGTC 61 AAGGGTGTCT TAGATTTCAT TAGCTATGTG TATGAGATAT TTGGTTTCAC TTTTAACCTG 121 AAGTTATCAA CGAGGCCTGA AAAATATCTT GGGGACTTGG AAAGTTGGGA GAAGGCTGAA 181 GCTGCTCTTG CAGAAGCATT GAACGAGTTT GGGAAGCCGT GGGAGATCAA CGAAGGAGAT 241 GGAGCATTTT ACGGTCCAAA AATTGATATC ACTGTTTCAG ATGCAATGAA AAGGAAATTT 301 CAGTGTGCAA CATTGCAGCT TGATTTCCAA CTTCCTCAAC GATTCAACCT GTCATACTCA 361 GCAGAAGATG AAAGTAAGAG GGAGAGACCA GTTATGATAC ATAGAGCTAT ACTTGGATCA 421 GTTGAGCGCA TGTTCGCTAT TCTCTTGGAG CATTTCAAGG AGAAATGGCC TTTCTGGCTT 481 AGTCCACGTC AAGCGATGGT Predicted gene structure (within gDNA segment 108088 to 104641): Exon 1 107039 107028 ( 12 n); cDNA 1 12 ( 12 n); score: 0.917 Intron 1 107027 106712 ( 316 n); Pd: 1.000 (s: 0), Pa: 0.993 (s: 0) Exon 2 106711 106679 ( 33 n); cDNA 13 45 ( 33 n); score: 0.909 Intron 2 106678 106598 ( 81 n); Pd: 0.997 (s: 0), Pa: 0.989 (s: 0.90) Exon 3 106597 106511 ( 87 n); cDNA 46 132 ( 87 n); score: 0.920 Intron 3 106510 106310 ( 201 n); Pd: 0.219 (s: 0.94), Pa: 0.985 (s: 0.84) Exon 4 106309 106217 ( 93 n); cDNA 133 225 ( 93 n); score: 0.860 Intron 4 106216 105727 ( 490 n); Pd: 0.998 (s: 0.90), Pa: 0.948 (s: 0.88) Exon 5 105726 105634 ( 93 n); cDNA 226 318 ( 93 n); score: 0.892 Intron 5 105633 105487 ( 147 n); Pd: 0.990 (s: 0.88), Pa: 0.992 (s: 0.94) Exon 6 105486 105305 ( 182 n); cDNA 319 500 ( 182 n); score: 0.929 MATCH C08HBa0336I24.1- SGN-E207964+ 0.905 500 1.000 C PGS_C08HBa0336I24.1-_SGN-E207964+ (107039 107028,106711 106679,106597 106511,106309 106217,105726 105634,105486 105305) Alignment (genomic DNA sequence = upper lines): AGATTTCAGC AGGTATCACC TTTTTTGTTT CCTTTTCATC TTTTATGTAT GATCATGCTA 106980 ||||| |||| || AGATTCCAGC AG........ .......... .......... .......... .......... 12 GTGTTTTCCT CTAGGAGCAT TAGTTATTTG TGTGATACGA ATATTCCTTG TTTCTTCCTG 106920 .......... .......... .......... .......... .......... .......... 12 CATAAGAAGC AACCTATAGG TTCTTAGGTC CTTTTATTCC ATGTTGTTTT TCACGTTGTT 106860 .......... .......... .......... .......... .......... .......... 12 CAATTGGTGG TTATATTTAT TTGTTTTTTT CCATATCTGT GATAATCTAT TATCAAGGAA 106800 .......... .......... .......... .......... .......... .......... 12 CTTCCTCCTG TAGAATCTGT TTTTAAAGAA CATCTTAATA ACTCTGCTGT GCTAAAACAA 106740 .......... .......... .......... .......... .......... .......... 12 CCTTTTTTAT AACCCTATTC CTTCGCAGGA TGATGCACAC ATCTTTTGCA GAGAGTCACA 106680 || |||||| ||| ||||| |||| | |||||||| .......... .......... ........GA TGATGCCCAC ATCTTCTGCA GGGAGTCACA 44 GGTTTGTTAA GATTTATGAT TATGTGTAGA TAACATATGC ATTATTTAGA ACCTAGTTTA 106620 | G......... .......... .......... .......... .......... .......... 45 ACCTAAGTTC TTCATGTTGC AGATTAAGGA TGAAGTCAAG GGCGTCTTAG AGTTCATCAG 106560 |||||||| ||||||||| || ||||||| | ||||| || .......... .......... ..ATTAAGGA AGAAGTCAAG GGTGTCTTAG ATTTCATTAG 83 CTATGTGTAT AAGATATTTG GTTTCACTTT TGACCTGAAG TTATCAACAG TACTACTTCA 106500 |||||||||| ||||||||| |||||||||| | |||||||| |||||||| CTATGTGTAT GAGATATTTG GTTTCACTTT TAACCTGAAG TTATCAACG. .......... 132 TCTATTCCAT TGTCCTTCAA TTTTTTTTTA CGCGATTTCA GCTGATATTG ATACTACATG 106440 .......... .......... .......... .......... .......... .......... 132 CATTTATTAT TTTATTAGTC ATTACAGATA CACCCTTAAT ATGGAACATT CATGTTGTGA 106380 .......... .......... .......... .......... .......... .......... 132 ATGTTTTTCA TATTTTCCAC ATGCGTACAT TCTCTTTCCA TGTATACCAA CACATATTTC 106320 .......... .......... .......... .......... .......... .......... 132 TGACTTGCAG AGGCCTGAAA AATTTCTTGG AGACATAGCA ACTTGGGTAA AGGCTGAAGC 106260 |||||||||| ||| |||||| ||| | | | | ||||| | |||||||||| .......... AGGCCTGAAA AATATCTTGG GGACTTGGAA AGTTGGGAGA AGGCTGAAGC 182 TGCTCTTTCT GAAGCATTGA ACGAGCATGG GAAGCCCTGG GAGGTTTGCT ATCAATTTTG 106200 ||||||| | |||||||||| ||||| ||| |||||| ||| ||| TGCTCTTGCA GAAGCATTGA ACGAGTTTGG GAAGCCGTGG GAG....... .......... 225 TTGGATTTTA AAATGTGAAG TTGTCAGACT GTTCTACATT TAAAATGACT GGACTCCCTT 106140 .......... .......... .......... .......... .......... .......... 225 TTTGCCGATT AAAAAACATT TGATTTACTC CTATTTTTGG TGCTTCTATT TTTATTCATC 106080 .......... .......... .......... .......... .......... .......... 225 CCAATTTATG TGTCGACTCA CTCAATCAAT TTTCTTTTTT AGAAAATCTT CATTTAAAAA 106020 .......... .......... .......... .......... .......... .......... 225 TTACGTCAGA TCTCTTAATA CTGGCACCAT TCTACTTGTT TTACGTGAAC ACTATTTAAG 105960 .......... .......... .......... .......... .......... .......... 225 CTAATATCTT AGACTCCTTG AACAATCAAA TGTTGTAGTA TAGAATGAGA TGTAGGGAGT 105900 .......... .......... .......... .......... .......... .......... 225 ACCTTTTTCG TGTTACCTGA CAGAAAAAGT GAGGATTGGG GTTGCTCCTC TTGCAATGTT 105840 .......... .......... .......... .......... .......... .......... 225 CCTGTTTATC TATGGAAAAT TAGGTAGTCC CCGCGTATCA GTGTTTTTTT GGTTATTTTG 105780 .......... .......... .......... .......... .......... .......... 225 TTTTCTTAAT CTCTTTTATC TTGCCTTTTA ATTAAAGAAT CTCATTCAAT TAGATCAATG 105720 ||||| | .......... .......... .......... .......... .......... ...ATCAACG 232 AAGGAGACGG AGCATTTTAT GGCCCAAAAA TTGATATAAG TGTTTCTGAT GCAATGAAGA 105660 ||||||| || ||||||||| || ||||||| ||||||| | |||||| ||| |||||||| | AAGGAGATGG AGCATTTTAC GGTCCAAAAA TTGATATCAC TGTTTCAGAT GCAATGAAAA 292 GGAAATTCCA GTGTGCGACA TTGCAGGTCA TATTTGTTCC TATTCTCCTT GGTTCATTTT 105600 ||||||| || |||||| ||| |||||| GGAAATTTCA GTGTGCAACA TTGCAG.... .......... .......... .......... 318 CACAAACAAT ATCATTCTTT ACCTTTGAAA TTCACCTACC TTGAAATTGT TCTCATGTTC 105540 .......... .......... .......... .......... .......... .......... 318 TTTTGTACCT TATTGGAAGT ATCATCTGAA ATTCTGAATG CTGTGTTTTT CAGCTTGATT 105480 ||||||| .......... .......... .......... .......... .......... ...CTTGATT 325 TCCAACTCCC TCAACGTTTC AACCTATCAT ACTCAGCAGA AGATGAAAGT AAGAGAGAGA 105420 ||||||| || |||||| ||| ||||| |||| |||||||||| |||||||||| ||||| |||| TCCAACTTCC TCAACGATTC AACCTGTCAT ACTCAGCAGA AGATGAAAGT AAGAGGGAGA 385 GACCAGTTAT GATACATAGA GCGATCCTTG GGTCAGTTGA GCGTATGTTC GCCATTCTTT 105360 |||||||||| |||||||||| || || |||| | |||||||| ||| |||||| || ||||| | GACCAGTTAT GATACATAGA GCTATACTTG GATCAGTTGA GCGCATGTTC GCTATTCTCT 445 TGGAGCATTT CAAAGGGAAA TGGCCTTTCT GGCTTAGTCC ACGTCAAGCT ATGGT 105305 |||||||||| ||| | |||| |||||||||| |||||||||| ||||||||| ||||| TGGAGCATTT CAAGGAGAAA TGGCCTTTCT GGCTTAGTCC ACGTCAAGCG ATGGT 500 hqPGS_C08HBa0336I24.1-_SGN-E207964+ (106711 106679,106597 106511,106309 106217,105726 105634,105486 105305) ******************************************************************************** EST sequence 265 +strand 557 n (File: SGN-E319713+) 1 TTACAGGGAG CTACCACTTC GTCTGGCTGA CTTTGGAGTT CTACACAGGA ATGAAGCCAG 61 TGGTGCACTC ACTGGCTTAA CGCGTGTCAG GAGATTCCAG CAGGATGATG CCCACATCTT 121 CTGCAGGGAG TCACAGATTA AGGAAGAAGT CAAGGGTGTC TTAGATTTCA TTAGCTATGT 181 GTATGAGATA TTTGGTTTCA CTTTTAACCT GAAGTTATCA ACGAGGCCTG AAAAATATCT 241 TGGGGACTTG GAAAGTTGGG AGAAGGCTGA AGCTGCTCTT GCAGAAGCAT TGAACGAGTT 301 TGGGAAGCCG TGGGAGATCA ACGAAGGAGA TGGAGCATTT TACGGTCCAA AAATTGATAT 361 CACTGTTTCA GATGCAATGA AAAGGAAATT TCAGTGTGCA ACATTGCAGC TTGATTTCCA 421 ACTTCCTCAA CGATTCAACC TGTCATACTC AGCAGAAGAT GAAAGTAAGA GGGAGAGACC 481 AGTTATGATA CATAGAGCTA TACTTGGATC AGTTGAGCGC ATGTTCGCTA TTCTCTTGGA 541 GCATTTCAAG GGGAAAT Predicted gene structure (within gDNA segment 108998 to 104198): Exon 1 107773 107767 ( 7 n); cDNA 2 8 ( 7 n); score: 1.000 Intron 1 107766 107123 ( 644 n); Pd: 0.846 (s: 0), Pa: 0.849 (s: 0.92) Exon 2 107122 107028 ( 95 n); cDNA 9 103 ( 95 n); score: 0.926 Intron 2 107027 106712 ( 316 n); Pd: 1.000 (s: 0.92), Pa: 0.993 (s: 0) Exon 3 106711 106679 ( 33 n); cDNA 104 136 ( 33 n); score: 0.909 Intron 3 106678 106598 ( 81 n); Pd: 0.997 (s: 0), Pa: 0.989 (s: 0.90) Exon 4 106597 106511 ( 87 n); cDNA 137 223 ( 87 n); score: 0.920 Intron 4 106510 106310 ( 201 n); Pd: 0.219 (s: 0.94), Pa: 0.985 (s: 0.84) Exon 5 106309 106217 ( 93 n); cDNA 224 316 ( 93 n); score: 0.860 Intron 5 106216 105727 ( 490 n); Pd: 0.998 (s: 0.90), Pa: 0.948 (s: 0.88) Exon 6 105726 105634 ( 93 n); cDNA 317 409 ( 93 n); score: 0.892 Intron 6 105633 105487 ( 147 n); Pd: 0.990 (s: 0.88), Pa: 0.992 (s: 0.94) Exon 7 105486 105339 ( 148 n); cDNA 410 557 ( 148 n); score: 0.926 MATCH C08HBa0336I24.1- SGN-E319713+ 0.907 556 0.998 C PGS_C08HBa0336I24.1-_SGN-E319713+ (107773 107767,107122 107028,106711 106679,106597 106511,106309 106217,105726 105634,105486 105339) Alignment (genomic DNA sequence = upper lines): TACAGGGGTG AGATTTTCCA ACAGTTACTT TGCTTCTCCC AGCAGTTACT TTCCTTTTTT 107714 ||||||| TACAGGG... .......... .......... .......... .......... .......... 8 CTTGCTTTAC TTGCACGCTT TAGTTGTAGC ATTGGTCTTG CGTGCAATTT CTTGAAACTA 107654 .......... .......... .......... .......... .......... .......... 8 ATCATGCAGG ATATGAGATT TTTATGATAA TATAGAGGAC ACTTGTATAC TTGTATGCGG 107594 .......... .......... .......... .......... .......... .......... 8 ATGTTTCCTT CCCTTATTTA TAAAATTTTA TTTCTTTATC AGTAAAACAT TAAGGACACT 107534 .......... .......... .......... .......... .......... .......... 8 TGACCATGAA ATGTTAGTGG TACTAGTGTC TTTTGAAAAC AAGGTCTGCA TGCATTCTGC 107474 .......... .......... .......... .......... .......... .......... 8 CCTCTCTATA CCCCAGTTGT GGGATTACAC CAGATATGTT GTTGTTGGTA TTATTCTAAC 107414 .......... .......... .......... .......... .......... .......... 8 ATCAGTTGGT TATGAAGAAG CTCTATGCAG TGCACCTTAT TGAGGGGTGA AATTTGATGT 107354 .......... .......... .......... .......... .......... .......... 8 AGATTTCTTA TCTAAAAGGC AGATTTTAGA CATGCAACAT ATTCACTCCA AATATTGTCT 107294 .......... .......... .......... .......... .......... .......... 8 TTTCATAAAA TCCAAGATCT TCTCATTATT TGTACCAGCC TTTAGCAGTC TGCTGCATCA 107234 .......... .......... .......... .......... .......... .......... 8 TAGCCGACTT AGTTTCGTCT TTATAGTGCC TCTATCTATC TATCTATCTA ACTGATGCCA 107174 .......... .......... .......... .......... .......... .......... 8 TTGACACTGC AAGCAACACA TGAATCATTA ACTAACTGTC CAACAATGCA GAACTACCAC 107114 | ||||||| .......... .......... .......... .......... .......... .AGCTACCAC 17 TTCGTCTGGC TGACTTTGGG GTTCTGCACA GGAATGAGGC CAGTGGTGCA CTTACTGGCT 107054 |||||||||| ||||||||| ||||| |||| ||||||| || |||||||||| || ||||||| TTCGTCTGGC TGACTTTGGA GTTCTACACA GGAATGAAGC CAGTGGTGCA CTCACTGGCT 77 TAACACGTGT CAGGAGATTT CAGCAGGTAT CACCTTTTTT GTTTCCTTTT CATCTTTTAT 106994 |||| ||||| ||||||||| |||||| TAACGCGTGT CAGGAGATTC CAGCAG.... .......... .......... .......... 103 GTATGATCAT GCTAGTGTTT TCCTCTAGGA GCATTAGTTA TTTGTGTGAT ACGAATATTC 106934 .......... .......... .......... .......... .......... .......... 103 CTTGTTTCTT CCTGCATAAG AAGCAACCTA TAGGTTCTTA GGTCCTTTTA TTCCATGTTG 106874 .......... .......... .......... .......... .......... .......... 103 TTTTTCACGT TGTTCAATTG GTGGTTATAT TTATTTGTTT TTTTCCATAT CTGTGATAAT 106814 .......... .......... .......... .......... .......... .......... 103 CTATTATCAA GGAACTTCCT CCTGTAGAAT CTGTTTTTAA AGAACATCTT AATAACTCTG 106754 .......... .......... .......... .......... .......... .......... 103 CTGTGCTAAA ACAACCTTTT TTATAACCCT ATTCCTTCGC AGGATGATGC ACACATCTTT 106694 |||||||| |||||||| .......... .......... .......... .......... ..GATGATGC CCACATCTTC 121 TGCAGAGAGT CACAGGTTTG TTAAGATTTA TGATTATGTG TAGATAACAT ATGCATTATT 106634 ||||| |||| ||||| TGCAGGGAGT CACAG..... .......... .......... .......... .......... 136 TAGAACCTAG TTTAACCTAA GTTCTTCATG TTGCAGATTA AGGATGAAGT CAAGGGCGTC 106574 |||| |||| ||||| |||||| ||| .......... .......... .......... ......ATTA AGGAAGAAGT CAAGGGTGTC 160 TTAGAGTTCA TCAGCTATGT GTATAAGATA TTTGGTTTCA CTTTTGACCT GAAGTTATCA 106514 ||||| |||| | |||||||| |||| ||||| |||||||||| ||||| |||| |||||||||| TTAGATTTCA TTAGCTATGT GTATGAGATA TTTGGTTTCA CTTTTAACCT GAAGTTATCA 220 ACAGTACTAC TTCATCTATT CCATTGTCCT TCAATTTTTT TTTACGCGAT TTCAGCTGAT 106454 || ACG....... .......... .......... .......... .......... .......... 223 ATTGATACTA CATGCATTTA TTATTTTATT AGTCATTACA GATACACCCT TAATATGGAA 106394 .......... .......... .......... .......... .......... .......... 223 CATTCATGTT GTGAATGTTT TTCATATTTT CCACATGCGT ACATTCTCTT TCCATGTATA 106334 .......... .......... .......... .......... .......... .......... 223 CCAACACATA TTTCTGACTT GCAGAGGCCT GAAAAATTTC TTGGAGACAT AGCAACTTGG 106274 |||||| ||||||| || |||| ||| | | || |||| .......... .......... ....AGGCCT GAAAAATATC TTGGGGACTT GGAAAGTTGG 259 GTAAAGGCTG AAGCTGCTCT TTCTGAAGCA TTGAACGAGC ATGGGAAGCC CTGGGAGGTT 106214 | ||||||| |||||||||| | | |||||| ||||||||| ||||||||| |||||| GAGAAGGCTG AAGCTGCTCT TGCAGAAGCA TTGAACGAGT TTGGGAAGCC GTGGGAG... 316 TGCTATCAAT TTTGTTGGAT TTTAAAATGT GAAGTTGTCA GACTGTTCTA CATTTAAAAT 106154 .......... .......... .......... .......... .......... .......... 316 GACTGGACTC CCTTTTTGCC GATTAAAAAA CATTTGATTT ACTCCTATTT TTGGTGCTTC 106094 .......... .......... .......... .......... .......... .......... 316 TATTTTTATT CATCCCAATT TATGTGTCGA CTCACTCAAT CAATTTTCTT TTTTAGAAAA 106034 .......... .......... .......... .......... .......... .......... 316 TCTTCATTTA AAAATTACGT CAGATCTCTT AATACTGGCA CCATTCTACT TGTTTTACGT 105974 .......... .......... .......... .......... .......... .......... 316 GAACACTATT TAAGCTAATA TCTTAGACTC CTTGAACAAT CAAATGTTGT AGTATAGAAT 105914 .......... .......... .......... .......... .......... .......... 316 GAGATGTAGG GAGTACCTTT TTCGTGTTAC CTGACAGAAA AAGTGAGGAT TGGGGTTGCT 105854 .......... .......... .......... .......... .......... .......... 316 CCTCTTGCAA TGTTCCTGTT TATCTATGGA AAATTAGGTA GTCCCCGCGT ATCAGTGTTT 105794 .......... .......... .......... .......... .......... .......... 316 TTTTGGTTAT TTTGTTTTCT TAATCTCTTT TATCTTGCCT TTTAATTAAA GAATCTCATT 105734 .......... .......... .......... .......... .......... .......... 316 CAATTAGATC AATGAAGGAG ACGGAGCATT TTATGGCCCA AAAATTGATA TAAGTGTTTC 105674 ||| || ||||||| | |||||||| ||| || ||| |||||||||| | | |||||| .......ATC AACGAAGGAG ATGGAGCATT TTACGGTCCA AAAATTGATA TCACTGTTTC 369 TGATGCAATG AAGAGGAAAT TCCAGTGTGC GACATTGCAG GTCATATTTG TTCCTATTCT 105614 ||||||||| || ||||||| | |||||||| ||||||||| AGATGCAATG AAAAGGAAAT TTCAGTGTGC AACATTGCAG .......... .......... 409 CCTTGGTTCA TTTTCACAAA CAATATCATT CTTTACCTTT GAAATTCACC TACCTTGAAA 105554 .......... .......... .......... .......... .......... .......... 409 TTGTTCTCAT GTTCTTTTGT ACCTTATTGG AAGTATCATC TGAAATTCTG AATGCTGTGT 105494 .......... .......... .......... .......... .......... .......... 409 TTTTCAGCTT GATTTCCAAC TCCCTCAACG TTTCAACCTA TCATACTCAG CAGAAGATGA 105434 ||| |||||||||| | |||||||| |||||||| |||||||||| |||||||||| .......CTT GATTTCCAAC TTCCTCAACG ATTCAACCTG TCATACTCAG CAGAAGATGA 462 AAGTAAGAGA GAGAGACCAG TTATGATACA TAGAGCGATC CTTGGGTCAG TTGAGCGTAT 105374 ||||||||| |||||||||| |||||||||| |||||| || ||||| |||| ||||||| || AAGTAAGAGG GAGAGACCAG TTATGATACA TAGAGCTATA CTTGGATCAG TTGAGCGCAT 522 GTTCGCCATT CTTTTGGAGC ATTTCAAAGG GAAAT 105339 |||||| ||| || ||||||| ||||||| || ||||| GTTCGCTATT CTCTTGGAGC ATTTCAAGGG GAAAT 557 hqPGS_C08HBa0336I24.1-_SGN-E319713+ (107122 107028,106711 106679,106597 106511,106309 106217,105726 105634,105486 105339) ******************************************************************************** EST sequence 172 +strand 342 n (File: SGN-E212903+) 1 AACAAACTGC TGGAATTCAT AAAGAGTCAG TATTGGAAGA GAGGCTACAA GGAGGTTTGG 61 AGTCCAAATA TGTACAACAT GCAATTGTGG GAGACTTCTG GTCATGCTGC AAATTACAAG 121 GAGAACATGT TTGTGTTTGA GATTGAAAAA CAAGAATTTG GGCTGAAGCC AATGAATTGC 181 CCAGGTCATT GTTTGATATT TGATCACAGA GTTCGTTCTT ACAGGGAGCT ACCACTTCGT 241 CTGGCTGACT TTGGAGTTCT ACACAGGAAT GAAGCCAGTG GTGCACTCAC TGGCTTAACG 301 CGTGTCAGGA GATTCCAGCA GGATGATGCC CACATCTTCT GC Predicted gene structure (within gDNA segment 110490 to 105709): Exon 1 109368 109282 ( 87 n); cDNA 55 141 ( 87 n); score: 0.954 Intron 1 109281 107852 (1430 n); Pd: 0.991 (s: 0.98), Pa: 0.997 (s: 0.96) Exon 2 107851 107767 ( 85 n); cDNA 142 226 ( 85 n); score: 0.941 Intron 2 107766 107123 ( 644 n); Pd: 0.846 (s: 0.92), Pa: 0.849 (s: 0.92) Exon 3 107122 107028 ( 95 n); cDNA 227 321 ( 95 n); score: 0.926 Intron 3 107027 106712 ( 316 n); Pd: 1.000 (s: 0.92), Pa: 0.993 (s: 0) Exon 4 106711 106691 ( 21 n); cDNA 322 342 ( 21 n); score: 0.905 MATCH C08HBa0336I24.1- SGN-E212903+ 0.940 288 0.842 C PGS_C08HBa0336I24.1-_SGN-E212903+ (109368 109282,107851 107767,107122 107028,106711 106691) Alignment (genomic DNA sequence = upper lines): GTTTGGAGTC CAAATATGTA CAATATGCAG TTATGGGAAA CTTCTGGTCA TGCTGCAAAT 109309 |||||||||| |||||||||| ||| ||||| || ||||| | |||||||||| |||||||||| GTTTGGAGTC CAAATATGTA CAACATGCAA TTGTGGGAGA CTTCTGGTCA TGCTGCAAAT 114 TACAAGGAGA ACATGTTTGT GTTTGAGGTA AATTTGGCGC ACTAATAGCA GTTCTGATAT 109249 |||||||||| |||||||||| ||||||| TACAAGGAGA ACATGTTTGT GTTTGAG... .......... .......... .......... 141 TAATTGTGGT GTATCTGAAT AAGTTTTTCA TTTTTTTAAA AGCTCTAATT TTTGGATTAT 109189 .......... .......... .......... .......... .......... .......... 141 AGATTCTTCT AGGAGTATTT TATTATAAAG GCAACAAAGG AAAATTGTTG TTACTCAAAG 109129 .......... .......... .......... .......... .......... .......... 141 CACATATGTT TATCTCTCTT AGACTTTTGT TCTAAAGACA CAAATGAAAA GGAAGTCCAT 109069 .......... .......... .......... .......... .......... .......... 141 TTTCAAATGT AGATAGTGTA CAGAGATGCA TACTGCAGAT GGTTGCATTA CTCAGTCATT 109009 .......... .......... .......... .......... .......... .......... 141 GCACTCTCCG GGTGGCTATT ACATTTTTGA AAGGAGTAAT TATTTCCCGC AAGAGAAGCA 108949 .......... .......... .......... .......... .......... .......... 141 CTTCCCTTAT GTATAGAAAT CAGTGACGTA AAATTTATAA TCAACATAAA ACTCTAAAGT 108889 .......... .......... .......... .......... .......... .......... 141 TTGGTTCTGG TGAAGTAACT GGAGTTAAAT AATCCTACTA ACACTCATAT CAGAGGGTTG 108829 .......... .......... .......... .......... .......... .......... 141 GCTCCAAACA AATTTCTCGG TCATGAAAAA CACCCATATA AGAGAAAGAA TAGACATCCT 108769 .......... .......... .......... .......... .......... .......... 141 TATTTTTGGG GAAGGATTTT GGTTCCTATC AGTGAAATTT GGAATCATAG TTATAAGATG 108709 .......... .......... .......... .......... .......... .......... 141 AAAAAAATGA GTGGAAAATT ACTTATTAAA AAAGAAAACA GGGGTGATAC CAGCTTAGAT 108649 .......... .......... .......... .......... .......... .......... 141 GGATCGATTT AAGTGCTATA AGATGTAGAA GTATTTGCAA GGTGAAAGGA CTCTCCCGCG 108589 .......... .......... .......... .......... .......... .......... 141 AATTTATTAA AATAAATTTA CATTTATTGG TCACAACTTA GTGAGCAGTT TAGTCAAAAG 108529 .......... .......... .......... .......... .......... .......... 141 ATGAATCGGT ACAGGATTAA GACATATGAC TGTGAAATAT GTCGTTATAA ATGTGGTTTC 108469 .......... .......... .......... .......... .......... .......... 141 CAAACTAAAG CTTATATTTA AAGCTGATTT AATATATTTG TTCTGGATAA GCTTAAACAT 108409 .......... .......... .......... .......... .......... .......... 141 TATGTTCTTT ATGTTGAACG TTTCATGTTT CACTAAATTT CTAGTATGCT TGTTCTTTTA 108349 .......... .......... .......... .......... .......... .......... 141 TGAAGGGTTA ATATTATTGA TGTCAAAATT AGCACTAAGA AAGTGCTGTC ATTACATCCA 108289 .......... .......... .......... .......... .......... .......... 141 AAAGAGAACA GAAAAAAGGA AAGAAAAGGA GGAGTCCCAA GACTAGCATA TGCAAAAGCT 108229 .......... .......... .......... .......... .......... .......... 141 TCTAAGAACT GTAATTGGAG TTCCTAATCA TTTACTCATT CAATTTACAC CAAAAAGAAA 108169 .......... .......... .......... .......... .......... .......... 141 TAAAAAGATA ACAATCAGAT TTGCTCATAA ACTTGCAGGT TATTCAACTA GGATAGAAAT 108109 .......... .......... .......... .......... .......... .......... 141 GCCAGTTGCC AGATGATAAT TAGTAGAAAT AAGACAAACT TTCATTTATT TGAGATATCT 108049 .......... .......... .......... .......... .......... .......... 141 AGTTCTGACA AACAAGTTAG ATTTATGTTG TTTTTAGTCT TCCTTTATTT TTGTTGGACA 107989 .......... .......... .......... .......... .......... .......... 141 ATGCTGTTTA CATAAAAATT TGCACTTTTT CTAGCTAGGG TTATAGTATC TTTTCTTGCA 107929 .......... .......... .......... .......... .......... .......... 141 AGAGGTGGTG CCTCTGGCCG CTAATTTCAG CTAGATGCTT TCCTAATTAA AATGGTTCTT 107869 .......... .......... .......... .......... .......... .......... 141 GCTTCTTTGA CCTGCAGATT GAAAAGCAAG AATTTGGGCT GAAGCCAATG AACTGCCCAG 107809 ||| ||||| |||| |||||||||| |||||||||| || ||||||| .......... .......ATT GAAAAACAAG AATTTGGGCT GAAGCCAATG AATTGCCCAG 184 GTCATTGTTT AATATTTGAT CACAGGGTTC GTTCCTACAG GGGTGAGATT TTCCAACAGT 107749 |||||||||| ||||||||| ||||| |||| |||| ||||| || GTCATTGTTT GATATTTGAT CACAGAGTTC GTTCTTACAG GG........ .......... 226 TACTTTGCTT CTCCCAGCAG TTACTTTCCT TTTTTCTTGC TTTACTTGCA CGCTTTAGTT 107689 .......... .......... .......... .......... .......... .......... 226 GTAGCATTGG TCTTGCGTGC AATTTCTTGA AACTAATCAT GCAGGATATG AGATTTTTAT 107629 .......... .......... .......... .......... .......... .......... 226 GATAATATAG AGGACACTTG TATACTTGTA TGCGGATGTT TCCTTCCCTT ATTTATAAAA 107569 .......... .......... .......... .......... .......... .......... 226 TTTTATTTCT TTATCAGTAA AACATTAAGG ACACTTGACC ATGAAATGTT AGTGGTACTA 107509 .......... .......... .......... .......... .......... .......... 226 GTGTCTTTTG AAAACAAGGT CTGCATGCAT TCTGCCCTCT CTATACCCCA GTTGTGGGAT 107449 .......... .......... .......... .......... .......... .......... 226 TACACCAGAT ATGTTGTTGT TGGTATTATT CTAACATCAG TTGGTTATGA AGAAGCTCTA 107389 .......... .......... .......... .......... .......... .......... 226 TGCAGTGCAC CTTATTGAGG GGTGAAATTT GATGTAGATT TCTTATCTAA AAGGCAGATT 107329 .......... .......... .......... .......... .......... .......... 226 TTAGACATGC AACATATTCA CTCCAAATAT TGTCTTTTCA TAAAATCCAA GATCTTCTCA 107269 .......... .......... .......... .......... .......... .......... 226 TTATTTGTAC CAGCCTTTAG CAGTCTGCTG CATCATAGCC GACTTAGTTT CGTCTTTATA 107209 .......... .......... .......... .......... .......... .......... 226 GTGCCTCTAT CTATCTATCT ATCTAACTGA TGCCATTGAC ACTGCAAGCA ACACATGAAT 107149 .......... .......... .......... .......... .......... .......... 226 CATTAACTAA CTGTCCAACA ATGCAGAACT ACCACTTCGT CTGGCTGACT TTGGGGTTCT 107089 | || |||||||||| |||||||||| |||| ||||| .......... .......... ......AGCT ACCACTTCGT CTGGCTGACT TTGGAGTTCT 260 GCACAGGAAT GAGGCCAGTG GTGCACTTAC TGGCTTAACA CGTGTCAGGA GATTTCAGCA 107029 ||||||||| || ||||||| ||||||| || ||||||||| |||||||||| |||| ||||| ACACAGGAAT GAAGCCAGTG GTGCACTCAC TGGCTTAACG CGTGTCAGGA GATTCCAGCA 320 GGTATCACCT TTTTTGTTTC CTTTTCATCT TTTATGTATG ATCATGCTAG TGTTTTCCTC 106969 | G......... .......... .......... .......... .......... .......... 321 TAGGAGCATT AGTTATTTGT GTGATACGAA TATTCCTTGT TTCTTCCTGC ATAAGAAGCA 106909 .......... .......... .......... .......... .......... .......... 321 ACCTATAGGT TCTTAGGTCC TTTTATTCCA TGTTGTTTTT CACGTTGTTC AATTGGTGGT 106849 .......... .......... .......... .......... .......... .......... 321 TATATTTATT TGTTTTTTTC CATATCTGTG ATAATCTATT ATCAAGGAAC TTCCTCCTGT 106789 .......... .......... .......... .......... .......... .......... 321 AGAATCTGTT TTTAAAGAAC ATCTTAATAA CTCTGCTGTG CTAAAACAAC CTTTTTTATA 106729 .......... .......... .......... .......... .......... .......... 321 ACCCTATTCC TTCGCAGGAT GATGCACACA TCTTTTGC 106691 ||| ||||| |||| |||| ||| .......... .......GAT GATGCCCACA TCTTCTGC 342 hqPGS_C08HBa0336I24.1-_SGN-E212903+ (109368 109282,107851 107767,107122 107028,106711 106691) ******************************************************************************** EST sequence 324 +strand 528 n (File: SGN-E258246+) 1 TGAAAGCTTG CAAAGAGTTT ATGGAATATC TTTTCCAGAT CAGAAACAGT TGAAGGTATA 61 CCTAGATATG CTGGCGGAAG CAAAGAAATA CGATCACAGA GAGCTGACTA AGAAGCAGGA 121 GCTTTTCTTT TTTCATCCAT TAAGCCCTGG AAGTTGCTTC TTTCTTCCAC ATGGTGCTCG 181 TATTTGCAAC AAACTGCTGG AATTCATAAA GAGTCAGTAT TGGAAGAGAG GCTACAAGGA 241 GGTTTGGAGT CCAAATATGT ACAACATGCA ATTGTGGGAG ACTTCTGGTC ATGCTGCAAA 301 TTACAAGGAG AACATGTTTG TGTTTGAGAT TGAAAAACAA GAATTTGGGC TGAAGCCAAT 361 GAATTGCCCA GGTCATTGTT TGATATTTGA TCACAGAGTT CGTTCTTACA GGGAGCTACC 421 ACTTCGTCTG GCTGACTTTG GAGTTCTACA CAGGAATGAA GCCAGTGGTG CACTCACTGG 481 CTTAACGCGT GTCAGGAGAT TCCAGCAGGA TGATGCCCAC ATCTTCTG Predicted gene structure (within gDNA segment 112691 to 105719): Exon 1 112171 112118 ( 54 n); cDNA 2 55 ( 54 n); score: 0.944 Intron 1 112117 111362 ( 756 n); Pd: 0.685 (s: 0.94), Pa: 0.997 (s: 0.88) Exon 2 111361 111273 ( 89 n); cDNA 56 144 ( 89 n); score: 0.921 Intron 2 111272 111159 ( 114 n); Pd: 0.999 (s: 0.98), Pa: 0.914 (s: 0.90) Exon 3 111158 111062 ( 97 n); cDNA 145 241 ( 97 n); score: 0.907 Intron 3 111061 109369 (1693 n); Pd: 0.903 (s: 0.90), Pa: 0.977 (s: 0.92) Exon 4 109368 109282 ( 87 n); cDNA 242 328 ( 87 n); score: 0.954 Intron 4 109281 107852 (1430 n); Pd: 0.991 (s: 0.98), Pa: 0.997 (s: 0.96) Exon 5 107851 107767 ( 85 n); cDNA 329 413 ( 85 n); score: 0.941 Intron 5 107766 107123 ( 644 n); Pd: 0.846 (s: 0.92), Pa: 0.849 (s: 0.92) Exon 6 107122 107028 ( 95 n); cDNA 414 508 ( 95 n); score: 0.926 Intron 6 107027 106712 ( 316 n); Pd: 1.000 (s: 0.92), Pa: 0.993 (s: 0) Exon 7 106711 106692 ( 20 n); cDNA 509 528 ( 20 n); score: 0.900 MATCH C08HBa0336I24.1- SGN-E258246+ 0.931 527 0.998 C PGS_C08HBa0336I24.1-_SGN-E258246+ (112171 112118,111361 111273,111158 111062,109368 109282,107851 107767,107122 107028,106711 106692) Alignment (genomic DNA sequence = upper lines): GAAAGCTTGC AAAGAGTTTA CGGAATATCT TATCCAGATA AGAAACAGTT GAAGGTGACT 112112 |||||||||| |||||||||| ||||||||| | ||||||| |||||||||| |||| GAAAGCTTGC AAAGAGTTTA TGGAATATCT TTTCCAGATC AGAAACAGTT GAAG...... 55 TTCAAAAGCT GGCTACGTCT TTTCTGCATT TAACTTCATC TGCCATTATG CCTTTCTGTA 112052 .......... .......... .......... .......... .......... .......... 55 ATAATCAGTA CAAAAAGATT TAAAATTTGT TTCCTAAAAA AGGACATGAA ACTGTAGACC 111992 .......... .......... .......... .......... .......... .......... 55 ACTTAATTTT CATATTCTTG ATATCTGCCC TGCCTTCAAT GGAGGAAATG GATAGAGAAT 111932 .......... .......... .......... .......... .......... .......... 55 AAAGAGGAAA TAATCCCTTA TATTGTGTGA GATGGTTTAG CTTTCAAAAT TATTTCTGGG 111872 .......... .......... .......... .......... .......... .......... 55 TGATAATCTT CGGAAACGAT TTATTCTTAT TTAAAGTATC TGATGTTGCA AAGCTGAATC 111812 .......... .......... .......... .......... .......... .......... 55 CTTCAATGTG TATCTGGCGT CACTTCTTGT GAGTTGTGAT TACATTACAA TTACGTTTAC 111752 .......... .......... .......... .......... .......... .......... 55 ACTTTTGGAC TTTGTTTGTG CTAGTTTGTT TATCCAATTA GGTGGCTTAT TCTGATTCTT 111692 .......... .......... .......... .......... .......... .......... 55 TTTCCTTGTT TGTCTAATAT TATATTTATA TATCCTTTTT AAGCATGTGA GTAAACTAGC 111632 .......... .......... .......... .......... .......... .......... 55 TCATTGTGCC TATACCTTTT CATTTTATCT ATATTTTTGT TGTCTCTTCT CTCTTTTTTT 111572 .......... .......... .......... .......... .......... .......... 55 TTTAGATAGT TTAGTGAGTT TGGTAGGAGA TGAAGCGCAG CCCACATGTC ACTGTATATT 111512 .......... .......... .......... .......... .......... .......... 55 ATTTGGGTGC TAGCTTGATG AATTAATGAA ATAATATTTT ATTTATCAGT AAAAGCAAAA 111452 .......... .......... .......... .......... .......... .......... 55 GGTAGAGTAT TTCTGTTATC CTGACTCTTG AGACAAGGTA AAAGTACCAC TTCCAGTGAG 111392 .......... .......... .......... .......... .......... .......... 55 GACTTTTTAG TAAAATAATT TCTGTTATAG GAATATCTGG CAATGCTGGA GGAAGCAAAG 111332 | ||| || | ||||||| |||||||||| .......... .......... .......... GTATACCTAG ATATGCTGGC GGAAGCAAAG 85 AAATACGATC ACAGAGAGCT GACTAAGAAG CAGGAGCTTT TCTTCTTTCA TCCATTAAGG 111272 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| ||||||||| AAATACGATC ACAGAGAGCT GACTAAGAAG CAGGAGCTTT TCTTTTTTCA TCCATTAAG. 144 TATGCCTTGA AATCATTTTA CCTTATTATA AAAAAAATGC AAGAAGGTGT GCCTTGTAAT 111212 .......... .......... .......... .......... .......... .......... 144 TCCCACTTAA GTGAAATATA TCATAACATT TAAATGTGAA TTGTGCATTC CAGCCCTGGA 111152 ||||||| .......... .......... .......... .......... .......... ...CCCTGGA 151 AGTTGTTTCT TTCTTCCACA TGGTGCGCGA GTTTGCAACA AATTGCTGGA GTTCATACGG 111092 ||||| |||| |||||||||| |||||| || ||||||||| || ||||||| |||||| | AGTTGCTTCT TTCTTCCACA TGGTGCTCGT ATTTGCAACA AACTGCTGGA ATTCATAAAG 211 AGTCAGTATT GGAAGAGAGG CTACGAGGAG GTAACTAGCT TTGTGCTTAA ATTTATTAGT 111032 |||||||||| |||||||||| |||| ||||| AGTCAGTATT GGAAGAGAGG CTACAAGGAG .......... .......... .......... 241 TGGGAGGACT ATTTGAACCA CAGTGGAACC AATGTAAGTT TAGTTTGAAC TGCTGGGACT 110972 .......... .......... .......... .......... .......... .......... 241 ATTGACTGGT TGGAGTTCAG CCTGACAATT GCTGAAACTG TCTGCATTTT AAAGCAACAT 110912 .......... .......... .......... .......... .......... .......... 241 TTGTTTCTTG ATTTCGTTTG AGATGGATAG TGCACTCCTC ATTATTTAGT GGACTAAATC 110852 .......... .......... .......... .......... .......... .......... 241 CTTATTTCCC TCCTGTTGAA AGAGATCAGC ATGTGGTGCC TTGACAACCA ATTATGTCCT 110792 .......... .......... .......... .......... .......... .......... 241 TAGACTAGAT CAAAGTAGCA AGGGTACGGA GACGTAATCA TGAACATAGA GACTATATTT 110732 .......... .......... .......... .......... .......... .......... 241 TTAAGATGGA GGGGGAAATG ACACAGATAC ACCCTTTTAG AAATAAAGGA TATGAAGCTG 110672 .......... .......... .......... .......... .......... .......... 241 GAGGATTAGT CTTGCAGAAG TATCTATAGC TATAAAATGC AAAATTAAAA AGGTGCAACA 110612 .......... .......... .......... .......... .......... .......... 241 GTCCCTTATT CTTAGTTTTT GAAACACATC CTAAATAGCA TTAAAGTACC AAACAAAATA 110552 .......... .......... .......... .......... .......... .......... 241 TATGGGAAAT AAGTCTATTA TGCAGGGATT AAAATATGAA TAAGATATGT AGGATAAAAG 110492 .......... .......... .......... .......... .......... .......... 241 TAGCCTGTAG CAAGGAACAA ATTCAGTGAA TGAGCAGAAG AGTCATAGAC TGAAAGAGAA 110432 .......... .......... .......... .......... .......... .......... 241 CATTGTAACT TTGAGGAAAG AAAAATACTA CTTAGGGGTA CTATATAGGT GGAGCCAATT 110372 .......... .......... .......... .......... .......... .......... 241 CCTTTATTCA TCGAACCAGG TTCTTTTCTT CTTCGACTAG AATTTGAGTA AGAATGATGG 110312 .......... .......... .......... .......... .......... .......... 241 TTGTTTTTTG AGTTCAACTG TATTCTCTAT TTTACAGTGT TCTTAATGTG GTGATTGGAA 110252 .......... .......... .......... .......... .......... .......... 241 GCTTTGGCAG TGTGTTGGAC CTTAATTTAT TTTCTTTGAT TGGTGAAAGT CAAAGTATAC 110192 .......... .......... .......... .......... .......... .......... 241 ATAGAAAAGG CTCCCAATAA ACATCAAAGA AATGCATCTG TTGTTAATGC TGATAGTAGA 110132 .......... .......... .......... .......... .......... .......... 241 TTTCTTTTTG CTGTAAAAAA TTCTGGTGTT CCTTCCTCTT AGACGATCCA CTAGATGGCA 110072 .......... .......... .......... .......... .......... .......... 241 GCTACCAGTT GGATTCATTA ATTGCTTCTA GCATGTTCTA GCCTTGAAGA GACCCTTGGC 110012 .......... .......... .......... .......... .......... .......... 241 ATTCCTTTTC CAAATTATAT TAATCTGGTT AAGTTGGCTA AGCAAAGATG ACACCATTTA 109952 .......... .......... .......... .......... .......... .......... 241 AAATCTTGTT AACCGACTCC AATATACTTG TCAAAGATTA GGCGTAGTTG CTGTCTCAAC 109892 .......... .......... .......... .......... .......... .......... 241 ATCAGACACC CCTCACTCAA TCAAGGGAGA CTTGTAATCA GAGAACACAC ATGTACTAAA 109832 .......... .......... .......... .......... .......... .......... 241 GAGATTAAAT GAAAAAGAAA GGGGAAGTTG TGTCTGACCC GGGTCTCGTG TCGATGCGAC 109772 .......... .......... .......... .......... .......... .......... 241 AATTCATGTG GTGTCTGCTT CATTTGATGA AATATTATGT CTAACTCGTC CTTCTCTTTG 109712 .......... .......... .......... .......... .......... .......... 241 TTCTTCTTGG ACTCAGATTT TCTCTGCCTT TTCTCTCTTT ATCCTTGCTC TCACTCCTCA 109652 .......... .......... .......... .......... .......... .......... 241 GGCAAAAGGT TGAACCATTT TTTCTTTAAT AAGATAAAAG TTTATTGACC AAGTATCAAG 109592 .......... .......... .......... .......... .......... .......... 241 AAGGTACCTA CACCAAAAGA TACAAAAGAC TGCTGGGAAT ATCCATACAG TCAATTGCAA 109532 .......... .......... .......... .......... .......... .......... 241 CATCTCCCTA GCGACTCCCA AAACTCTATA TATTGATCTA TATTATCAAG GACAAAAGAT 109472 .......... .......... .......... .......... .......... .......... 241 TGAACCATTG AAGCTTAACC CTGTTGCCTT TTCTGGTTCA GGGATAAAAA CAATCAAGAG 109412 .......... .......... .......... .......... .......... .......... 241 AATTATGTGC TATTCTGTTT GTTTTGATAC ATGATCCATG CAGGTTTGGA GTCCAAATAT 109352 ||||||| |||||||||| .......... .......... .......... .......... ...GTTTGGA GTCCAAATAT 258 GTACAATATG CAGTTATGGG AAACTTCTGG TCATGCTGCA AATTACAAGG AGAACATGTT 109292 |||||| ||| || || |||| | |||||||| |||||||||| |||||||||| |||||||||| GTACAACATG CAATTGTGGG AGACTTCTGG TCATGCTGCA AATTACAAGG AGAACATGTT 318 TGTGTTTGAG GTAAATTTGG CGCACTAATA GCAGTTCTGA TATTAATTGT GGTGTATCTG 109232 |||||||||| TGTGTTTGAG .......... .......... .......... .......... .......... 328 AATAAGTTTT TCATTTTTTT AAAAGCTCTA ATTTTTGGAT TATAGATTCT TCTAGGAGTA 109172 .......... .......... .......... .......... .......... .......... 328 TTTTATTATA AAGGCAACAA AGGAAAATTG TTGTTACTCA AAGCACATAT GTTTATCTCT 109112 .......... .......... .......... .......... .......... .......... 328 CTTAGACTTT TGTTCTAAAG ACACAAATGA AAAGGAAGTC CATTTTCAAA TGTAGATAGT 109052 .......... .......... .......... .......... .......... .......... 328 GTACAGAGAT GCATACTGCA GATGGTTGCA TTACTCAGTC ATTGCACTCT CCGGGTGGCT 108992 .......... .......... .......... .......... .......... .......... 328 ATTACATTTT TGAAAGGAGT AATTATTTCC CGCAAGAGAA GCACTTCCCT TATGTATAGA 108932 .......... .......... .......... .......... .......... .......... 328 AATCAGTGAC GTAAAATTTA TAATCAACAT AAAACTCTAA AGTTTGGTTC TGGTGAAGTA 108872 .......... .......... .......... .......... .......... .......... 328 ACTGGAGTTA AATAATCCTA CTAACACTCA TATCAGAGGG TTGGCTCCAA ACAAATTTCT 108812 .......... .......... .......... .......... .......... .......... 328 CGGTCATGAA AAACACCCAT ATAAGAGAAA GAATAGACAT CCTTATTTTT GGGGAAGGAT 108752 .......... .......... .......... .......... .......... .......... 328 TTTGGTTCCT ATCAGTGAAA TTTGGAATCA TAGTTATAAG ATGAAAAAAA TGAGTGGAAA 108692 .......... .......... .......... .......... .......... .......... 328 ATTACTTATT AAAAAAGAAA ACAGGGGTGA TACCAGCTTA GATGGATCGA TTTAAGTGCT 108632 .......... .......... .......... .......... .......... .......... 328 ATAAGATGTA GAAGTATTTG CAAGGTGAAA GGACTCTCCC GCGAATTTAT TAAAATAAAT 108572 .......... .......... .......... .......... .......... .......... 328 TTACATTTAT TGGTCACAAC TTAGTGAGCA GTTTAGTCAA AAGATGAATC GGTACAGGAT 108512 .......... .......... .......... .......... .......... .......... 328 TAAGACATAT GACTGTGAAA TATGTCGTTA TAAATGTGGT TTCCAAACTA AAGCTTATAT 108452 .......... .......... .......... .......... .......... .......... 328 TTAAAGCTGA TTTAATATAT TTGTTCTGGA TAAGCTTAAA CATTATGTTC TTTATGTTGA 108392 .......... .......... .......... .......... .......... .......... 328 ACGTTTCATG TTTCACTAAA TTTCTAGTAT GCTTGTTCTT TTATGAAGGG TTAATATTAT 108332 .......... .......... .......... .......... .......... .......... 328 TGATGTCAAA ATTAGCACTA AGAAAGTGCT GTCATTACAT CCAAAAGAGA ACAGAAAAAA 108272 .......... .......... .......... .......... .......... .......... 328 GGAAAGAAAA GGAGGAGTCC CAAGACTAGC ATATGCAAAA GCTTCTAAGA ACTGTAATTG 108212 .......... .......... .......... .......... .......... .......... 328 GAGTTCCTAA TCATTTACTC ATTCAATTTA CACCAAAAAG AAATAAAAAG ATAACAATCA 108152 .......... .......... .......... .......... .......... .......... 328 GATTTGCTCA TAAACTTGCA GGTTATTCAA CTAGGATAGA AATGCCAGTT GCCAGATGAT 108092 .......... .......... .......... .......... .......... .......... 328 AATTAGTAGA AATAAGACAA ACTTTCATTT ATTTGAGATA TCTAGTTCTG ACAAACAAGT 108032 .......... .......... .......... .......... .......... .......... 328 TAGATTTATG TTGTTTTTAG TCTTCCTTTA TTTTTGTTGG ACAATGCTGT TTACATAAAA 107972 .......... .......... .......... .......... .......... .......... 328 ATTTGCACTT TTTCTAGCTA GGGTTATAGT ATCTTTTCTT GCAAGAGGTG GTGCCTCTGG 107912 .......... .......... .......... .......... .......... .......... 328 CCGCTAATTT CAGCTAGATG CTTTCCTAAT TAAAATGGTT CTTGCTTCTT TGACCTGCAG 107852 .......... .......... .......... .......... .......... .......... 328 ATTGAAAAGC AAGAATTTGG GCTGAAGCCA ATGAACTGCC CAGGTCATTG TTTAATATTT 107792 |||||||| | |||||||||| |||||||||| ||||| |||| |||||||||| ||| |||||| ATTGAAAAAC AAGAATTTGG GCTGAAGCCA ATGAATTGCC CAGGTCATTG TTTGATATTT 388 GATCACAGGG TTCGTTCCTA CAGGGGTGAG ATTTTCCAAC AGTTACTTTG CTTCTCCCAG 107732 |||||||| | ||||||| || ||||| GATCACAGAG TTCGTTCTTA CAGGG..... .......... .......... .......... 413 CAGTTACTTT CCTTTTTTCT TGCTTTACTT GCACGCTTTA GTTGTAGCAT TGGTCTTGCG 107672 .......... .......... .......... .......... .......... .......... 413 TGCAATTTCT TGAAACTAAT CATGCAGGAT ATGAGATTTT TATGATAATA TAGAGGACAC 107612 .......... .......... .......... .......... .......... .......... 413 TTGTATACTT GTATGCGGAT GTTTCCTTCC CTTATTTATA AAATTTTATT TCTTTATCAG 107552 .......... .......... .......... .......... .......... .......... 413 TAAAACATTA AGGACACTTG ACCATGAAAT GTTAGTGGTA CTAGTGTCTT TTGAAAACAA 107492 .......... .......... .......... .......... .......... .......... 413 GGTCTGCATG CATTCTGCCC TCTCTATACC CCAGTTGTGG GATTACACCA GATATGTTGT 107432 .......... .......... .......... .......... .......... .......... 413 TGTTGGTATT ATTCTAACAT CAGTTGGTTA TGAAGAAGCT CTATGCAGTG CACCTTATTG 107372 .......... .......... .......... .......... .......... .......... 413 AGGGGTGAAA TTTGATGTAG ATTTCTTATC TAAAAGGCAG ATTTTAGACA TGCAACATAT 107312 .......... .......... .......... .......... .......... .......... 413 TCACTCCAAA TATTGTCTTT TCATAAAATC CAAGATCTTC TCATTATTTG TACCAGCCTT 107252 .......... .......... .......... .......... .......... .......... 413 TAGCAGTCTG CTGCATCATA GCCGACTTAG TTTCGTCTTT ATAGTGCCTC TATCTATCTA 107192 .......... .......... .......... .......... .......... .......... 413 TCTATCTAAC TGATGCCATT GACACTGCAA GCAACACATG AATCATTAAC TAACTGTCCA 107132 .......... .......... .......... .......... .......... .......... 413 ACAATGCAGA ACTACCACTT CGTCTGGCTG ACTTTGGGGT TCTGCACAGG AATGAGGCCA 107072 | ||||||||| |||||||||| ||||||| || ||| |||||| ||||| |||| .........A GCTACCACTT CGTCTGGCTG ACTTTGGAGT TCTACACAGG AATGAAGCCA 464 GTGGTGCACT TACTGGCTTA ACACGTGTCA GGAGATTTCA GCAGGTATCA CCTTTTTTGT 107012 |||||||||| ||||||||| || ||||||| ||||||| || |||| GTGGTGCACT CACTGGCTTA ACGCGTGTCA GGAGATTCCA GCAG...... .......... 508 TTCCTTTTCA TCTTTTATGT ATGATCATGC TAGTGTTTTC CTCTAGGAGC ATTAGTTATT 106952 .......... .......... .......... .......... .......... .......... 508 TGTGTGATAC GAATATTCCT TGTTTCTTCC TGCATAAGAA GCAACCTATA GGTTCTTAGG 106892 .......... .......... .......... .......... .......... .......... 508 TCCTTTTATT CCATGTTGTT TTTCACGTTG TTCAATTGGT GGTTATATTT ATTTGTTTTT 106832 .......... .......... .......... .......... .......... .......... 508 TTCCATATCT GTGATAATCT ATTATCAAGG AACTTCCTCC TGTAGAATCT GTTTTTAAAG 106772 .......... .......... .......... .......... .......... .......... 508 AACATCTTAA TAACTCTGCT GTGCTAAAAC AACCTTTTTT ATAACCCTAT TCCTTCGCAG 106712 .......... .......... .......... .......... .......... .......... 508 GATGATGCAC ACATCTTTTG 106692 |||||||| | ||||||| || GATGATGCCC ACATCTTCTG 528 hqPGS_C08HBa0336I24.1-_SGN-E258246+ (112171 112118,111361 111273,111158 111062,109368 109282,107851 107767,107122 107028) ******************************************************************************** EST sequence 72 +strand 439 n (File: SGN-E325168+) 1 CGTATACCTA TATATGCTGG CGGAAGCAAA GAAATACGAT CACATAGAGC TGACTAAGAA 61 GCAGGAGCTT TTCTTTTTTC ATCCATTAAG CCCTGGAAGT TGCTTCTTTC TTCCACATGG 121 TGCTCGTATT TGCAACAAAC TGCTGGAATT CATAAAGAGT CAGTATTGGA AGAGAGGCTA 181 CAAGGAGGTT TGGAGTCCAA ATATGTACAA CATGCAATTG TGGGAGACTT CTGGTCATGC 241 TGCAAATTAC AAGGAGAACA TGTTTGTGTT TGAGATTGAA AAACAAGAAT TTGGGCTGAA 301 GCCAATGAAT TGCCCAAGTC ATTGTTTGAT ATTTGATCAC AGAGTTCGTT CTTACAGGGA 361 GCTACCACTT CGTCTGGCTG ACTTTGGAGT TCTACACAAG AATGAAGCCA GTGGTGCACT 421 CACTGGCTTA ACGCGTGTC Predicted gene structure (within gDNA segment 112151 to 107022): Exon 1 111359 111273 ( 87 n); cDNA 4 90 ( 87 n); score: 0.908 Intron 1 111272 111159 ( 114 n); Pd: 0.999 (s: 0.96), Pa: 0.914 (s: 0.90) Exon 2 111158 111062 ( 97 n); cDNA 91 187 ( 97 n); score: 0.907 Intron 2 111061 109369 (1693 n); Pd: 0.903 (s: 0.90), Pa: 0.977 (s: 0.92) Exon 3 109368 109282 ( 87 n); cDNA 188 274 ( 87 n); score: 0.954 Intron 3 109281 107852 (1430 n); Pd: 0.991 (s: 0.98), Pa: 0.997 (s: 0.94) Exon 4 107851 107767 ( 85 n); cDNA 275 359 ( 85 n); score: 0.929 Intron 4 107766 107123 ( 644 n); Pd: 0.846 (s: 0.90), Pa: 0.849 (s: 0.90) Exon 5 107122 107043 ( 80 n); cDNA 360 439 ( 80 n); score: 0.913 MATCH C08HBa0336I24.1- SGN-E325168+ 0.922 436 0.993 C PGS_C08HBa0336I24.1-_SGN-E325168+ (111359 111273,111158 111062,109368 109282,107851 107767,107122 107043) Alignment (genomic DNA sequence = upper lines): ATATCTGGCA ATGCTGGAGG AAGCAAAGAA ATACGATCAC AGAGAGCTGA CTAAGAAGCA 111300 ||| || ||||||| || |||||||||| |||||||||| | |||||||| |||||||||| ATACCTATAT ATGCTGGCGG AAGCAAAGAA ATACGATCAC ATAGAGCTGA CTAAGAAGCA 63 GGAGCTTTTC TTCTTTCATC CATTAAGGTA TGCCTTGAAA TCATTTTACC TTATTATAAA 111240 |||||||||| || ||||||| ||||||| GGAGCTTTTC TTTTTTCATC CATTAAG... .......... .......... .......... 90 AAAAATGCAA GAAGGTGTGC CTTGTAATTC CCACTTAAGT GAAATATATC ATAACATTTA 111180 .......... .......... .......... .......... .......... .......... 90 AATGTGAATT GTGCATTCCA GCCCTGGAAG TTGTTTCTTT CTTCCACATG GTGCGCGAGT 111120 ||||||||| ||| |||||| |||||||||| |||| || | .......... .......... .CCCTGGAAG TTGCTTCTTT CTTCCACATG GTGCTCGTAT 129 TTGCAACAAA TTGCTGGAGT TCATACGGAG TCAGTATTGG AAGAGAGGCT ACGAGGAGGT 111060 |||||||||| ||||||| | ||||| ||| |||||||||| |||||||||| || ||||| TTGCAACAAA CTGCTGGAAT TCATAAAGAG TCAGTATTGG AAGAGAGGCT ACAAGGAG.. 187 AACTAGCTTT GTGCTTAAAT TTATTAGTTG GGAGGACTAT TTGAACCACA GTGGAACCAA 111000 .......... .......... .......... .......... .......... .......... 187 TGTAAGTTTA GTTTGAACTG CTGGGACTAT TGACTGGTTG GAGTTCAGCC TGACAATTGC 110940 .......... .......... .......... .......... .......... .......... 187 TGAAACTGTC TGCATTTTAA AGCAACATTT GTTTCTTGAT TTCGTTTGAG ATGGATAGTG 110880 .......... .......... .......... .......... .......... .......... 187 CACTCCTCAT TATTTAGTGG ACTAAATCCT TATTTCCCTC CTGTTGAAAG AGATCAGCAT 110820 .......... .......... .......... .......... .......... .......... 187 GTGGTGCCTT GACAACCAAT TATGTCCTTA GACTAGATCA AAGTAGCAAG GGTACGGAGA 110760 .......... .......... .......... .......... .......... .......... 187 CGTAATCATG AACATAGAGA CTATATTTTT AAGATGGAGG GGGAAATGAC ACAGATACAC 110700 .......... .......... .......... .......... .......... .......... 187 CCTTTTAGAA ATAAAGGATA TGAAGCTGGA GGATTAGTCT TGCAGAAGTA TCTATAGCTA 110640 .......... .......... .......... .......... .......... .......... 187 TAAAATGCAA AATTAAAAAG GTGCAACAGT CCCTTATTCT TAGTTTTTGA AACACATCCT 110580 .......... .......... .......... .......... .......... .......... 187 AAATAGCATT AAAGTACCAA ACAAAATATA TGGGAAATAA GTCTATTATG CAGGGATTAA 110520 .......... .......... .......... .......... .......... .......... 187 AATATGAATA AGATATGTAG GATAAAAGTA GCCTGTAGCA AGGAACAAAT TCAGTGAATG 110460 .......... .......... .......... .......... .......... .......... 187 AGCAGAAGAG TCATAGACTG AAAGAGAACA TTGTAACTTT GAGGAAAGAA AAATACTACT 110400 .......... .......... .......... .......... .......... .......... 187 TAGGGGTACT ATATAGGTGG AGCCAATTCC TTTATTCATC GAACCAGGTT CTTTTCTTCT 110340 .......... .......... .......... .......... .......... .......... 187 TCGACTAGAA TTTGAGTAAG AATGATGGTT GTTTTTTGAG TTCAACTGTA TTCTCTATTT 110280 .......... .......... .......... .......... .......... .......... 187 TACAGTGTTC TTAATGTGGT GATTGGAAGC TTTGGCAGTG TGTTGGACCT TAATTTATTT 110220 .......... .......... .......... .......... .......... .......... 187 TCTTTGATTG GTGAAAGTCA AAGTATACAT AGAAAAGGCT CCCAATAAAC ATCAAAGAAA 110160 .......... .......... .......... .......... .......... .......... 187 TGCATCTGTT GTTAATGCTG ATAGTAGATT TCTTTTTGCT GTAAAAAATT CTGGTGTTCC 110100 .......... .......... .......... .......... .......... .......... 187 TTCCTCTTAG ACGATCCACT AGATGGCAGC TACCAGTTGG ATTCATTAAT TGCTTCTAGC 110040 .......... .......... .......... .......... .......... .......... 187 ATGTTCTAGC CTTGAAGAGA CCCTTGGCAT TCCTTTTCCA AATTATATTA ATCTGGTTAA 109980 .......... .......... .......... .......... .......... .......... 187 GTTGGCTAAG CAAAGATGAC ACCATTTAAA ATCTTGTTAA CCGACTCCAA TATACTTGTC 109920 .......... .......... .......... .......... .......... .......... 187 AAAGATTAGG CGTAGTTGCT GTCTCAACAT CAGACACCCC TCACTCAATC AAGGGAGACT 109860 .......... .......... .......... .......... .......... .......... 187 TGTAATCAGA GAACACACAT GTACTAAAGA GATTAAATGA AAAAGAAAGG GGAAGTTGTG 109800 .......... .......... .......... .......... .......... .......... 187 TCTGACCCGG GTCTCGTGTC GATGCGACAA TTCATGTGGT GTCTGCTTCA TTTGATGAAA 109740 .......... .......... .......... .......... .......... .......... 187 TATTATGTCT AACTCGTCCT TCTCTTTGTT CTTCTTGGAC TCAGATTTTC TCTGCCTTTT 109680 .......... .......... .......... .......... .......... .......... 187 CTCTCTTTAT CCTTGCTCTC ACTCCTCAGG CAAAAGGTTG AACCATTTTT TCTTTAATAA 109620 .......... .......... .......... .......... .......... .......... 187 GATAAAAGTT TATTGACCAA GTATCAAGAA GGTACCTACA CCAAAAGATA CAAAAGACTG 109560 .......... .......... .......... .......... .......... .......... 187 CTGGGAATAT CCATACAGTC AATTGCAACA TCTCCCTAGC GACTCCCAAA ACTCTATATA 109500 .......... .......... .......... .......... .......... .......... 187 TTGATCTATA TTATCAAGGA CAAAAGATTG AACCATTGAA GCTTAACCCT GTTGCCTTTT 109440 .......... .......... .......... .......... .......... .......... 187 CTGGTTCAGG GATAAAAACA ATCAAGAGAA TTATGTGCTA TTCTGTTTGT TTTGATACAT 109380 .......... .......... .......... .......... .......... .......... 187 GATCCATGCA GGTTTGGAGT CCAAATATGT ACAATATGCA GTTATGGGAA ACTTCTGGTC 109320 ||||||||| |||||||||| |||| ||||| || ||||| |||||||||| .......... .GTTTGGAGT CCAAATATGT ACAACATGCA ATTGTGGGAG ACTTCTGGTC 236 ATGCTGCAAA TTACAAGGAG AACATGTTTG TGTTTGAGGT AAATTTGGCG CACTAATAGC 109260 |||||||||| |||||||||| |||||||||| |||||||| ATGCTGCAAA TTACAAGGAG AACATGTTTG TGTTTGAG.. .......... .......... 274 AGTTCTGATA TTAATTGTGG TGTATCTGAA TAAGTTTTTC ATTTTTTTAA AAGCTCTAAT 109200 .......... .......... .......... .......... .......... .......... 274 TTTTGGATTA TAGATTCTTC TAGGAGTATT TTATTATAAA GGCAACAAAG GAAAATTGTT 109140 .......... .......... .......... .......... .......... .......... 274 GTTACTCAAA GCACATATGT TTATCTCTCT TAGACTTTTG TTCTAAAGAC ACAAATGAAA 109080 .......... .......... .......... .......... .......... .......... 274 AGGAAGTCCA TTTTCAAATG TAGATAGTGT ACAGAGATGC ATACTGCAGA TGGTTGCATT 109020 .......... .......... .......... .......... .......... .......... 274 ACTCAGTCAT TGCACTCTCC GGGTGGCTAT TACATTTTTG AAAGGAGTAA TTATTTCCCG 108960 .......... .......... .......... .......... .......... .......... 274 CAAGAGAAGC ACTTCCCTTA TGTATAGAAA TCAGTGACGT AAAATTTATA ATCAACATAA 108900 .......... .......... .......... .......... .......... .......... 274 AACTCTAAAG TTTGGTTCTG GTGAAGTAAC TGGAGTTAAA TAATCCTACT AACACTCATA 108840 .......... .......... .......... .......... .......... .......... 274 TCAGAGGGTT GGCTCCAAAC AAATTTCTCG GTCATGAAAA ACACCCATAT AAGAGAAAGA 108780 .......... .......... .......... .......... .......... .......... 274 ATAGACATCC TTATTTTTGG GGAAGGATTT TGGTTCCTAT CAGTGAAATT TGGAATCATA 108720 .......... .......... .......... .......... .......... .......... 274 GTTATAAGAT GAAAAAAATG AGTGGAAAAT TACTTATTAA AAAAGAAAAC AGGGGTGATA 108660 .......... .......... .......... .......... .......... .......... 274 CCAGCTTAGA TGGATCGATT TAAGTGCTAT AAGATGTAGA AGTATTTGCA AGGTGAAAGG 108600 .......... .......... .......... .......... .......... .......... 274 ACTCTCCCGC GAATTTATTA AAATAAATTT ACATTTATTG GTCACAACTT AGTGAGCAGT 108540 .......... .......... .......... .......... .......... .......... 274 TTAGTCAAAA GATGAATCGG TACAGGATTA AGACATATGA CTGTGAAATA TGTCGTTATA 108480 .......... .......... .......... .......... .......... .......... 274 AATGTGGTTT CCAAACTAAA GCTTATATTT AAAGCTGATT TAATATATTT GTTCTGGATA 108420 .......... .......... .......... .......... .......... .......... 274 AGCTTAAACA TTATGTTCTT TATGTTGAAC GTTTCATGTT TCACTAAATT TCTAGTATGC 108360 .......... .......... .......... .......... .......... .......... 274 TTGTTCTTTT ATGAAGGGTT AATATTATTG ATGTCAAAAT TAGCACTAAG AAAGTGCTGT 108300 .......... .......... .......... .......... .......... .......... 274 CATTACATCC AAAAGAGAAC AGAAAAAAGG AAAGAAAAGG AGGAGTCCCA AGACTAGCAT 108240 .......... .......... .......... .......... .......... .......... 274 ATGCAAAAGC TTCTAAGAAC TGTAATTGGA GTTCCTAATC ATTTACTCAT TCAATTTACA 108180 .......... .......... .......... .......... .......... .......... 274 CCAAAAAGAA ATAAAAAGAT AACAATCAGA TTTGCTCATA AACTTGCAGG TTATTCAACT 108120 .......... .......... .......... .......... .......... .......... 274 AGGATAGAAA TGCCAGTTGC CAGATGATAA TTAGTAGAAA TAAGACAAAC TTTCATTTAT 108060 .......... .......... .......... .......... .......... .......... 274 TTGAGATATC TAGTTCTGAC AAACAAGTTA GATTTATGTT GTTTTTAGTC TTCCTTTATT 108000 .......... .......... .......... .......... .......... .......... 274 TTTGTTGGAC AATGCTGTTT ACATAAAAAT TTGCACTTTT TCTAGCTAGG GTTATAGTAT 107940 .......... .......... .......... .......... .......... .......... 274 CTTTTCTTGC AAGAGGTGGT GCCTCTGGCC GCTAATTTCA GCTAGATGCT TTCCTAATTA 107880 .......... .......... .......... .......... .......... .......... 274 AAATGGTTCT TGCTTCTTTG ACCTGCAGAT TGAAAAGCAA GAATTTGGGC TGAAGCCAAT 107820 || |||||| ||| |||||||||| |||||||||| .......... .......... ........AT TGAAAAACAA GAATTTGGGC TGAAGCCAAT 306 GAACTGCCCA GGTCATTGTT TAATATTTGA TCACAGGGTT CGTTCCTACA GGGGTGAGAT 107760 ||| |||||| ||||||||| | |||||||| |||||| ||| ||||| |||| ||| GAATTGCCCA AGTCATTGTT TGATATTTGA TCACAGAGTT CGTTCTTACA GGG....... 359 TTTCCAACAG TTACTTTGCT TCTCCCAGCA GTTACTTTCC TTTTTTCTTG CTTTACTTGC 107700 .......... .......... .......... .......... .......... .......... 359 ACGCTTTAGT TGTAGCATTG GTCTTGCGTG CAATTTCTTG AAACTAATCA TGCAGGATAT 107640 .......... .......... .......... .......... .......... .......... 359 GAGATTTTTA TGATAATATA GAGGACACTT GTATACTTGT ATGCGGATGT TTCCTTCCCT 107580 .......... .......... .......... .......... .......... .......... 359 TATTTATAAA ATTTTATTTC TTTATCAGTA AAACATTAAG GACACTTGAC CATGAAATGT 107520 .......... .......... .......... .......... .......... .......... 359 TAGTGGTACT AGTGTCTTTT GAAAACAAGG TCTGCATGCA TTCTGCCCTC TCTATACCCC 107460 .......... .......... .......... .......... .......... .......... 359 AGTTGTGGGA TTACACCAGA TATGTTGTTG TTGGTATTAT TCTAACATCA GTTGGTTATG 107400 .......... .......... .......... .......... .......... .......... 359 AAGAAGCTCT ATGCAGTGCA CCTTATTGAG GGGTGAAATT TGATGTAGAT TTCTTATCTA 107340 .......... .......... .......... .......... .......... .......... 359 AAAGGCAGAT TTTAGACATG CAACATATTC ACTCCAAATA TTGTCTTTTC ATAAAATCCA 107280 .......... .......... .......... .......... .......... .......... 359 AGATCTTCTC ATTATTTGTA CCAGCCTTTA GCAGTCTGCT GCATCATAGC CGACTTAGTT 107220 .......... .......... .......... .......... .......... .......... 359 TCGTCTTTAT AGTGCCTCTA TCTATCTATC TATCTAACTG ATGCCATTGA CACTGCAAGC 107160 .......... .......... .......... .......... .......... .......... 359 AACACATGAA TCATTAACTA ACTGTCCAAC AATGCAGAAC TACCACTTCG TCTGGCTGAC 107100 | | |||||||||| |||||||||| .......... .......... .......... .......AGC TACCACTTCG TCTGGCTGAC 382 TTTGGGGTTC TGCACAGGAA TGAGGCCAGT GGTGCACTTA CTGGCTTAAC ACGTGTC 107043 ||||| |||| | |||| ||| ||| |||||| |||||||| | |||||||||| |||||| TTTGGAGTTC TACACAAGAA TGAAGCCAGT GGTGCACTCA CTGGCTTAAC GCGTGTC 439 hqPGS_C08HBa0336I24.1-_SGN-E325168+ (111359 111273,111158 111062,109368 109282,107851 107767,107122 107043) ******************************************************************************** EST sequence 311 +strand 214 n (File: SGN-E258542+) 1 TGAAAGCTTG CAAAGAGTTT ATGGAATATC TTTTCCAGAT CAGAAACAGT TGAAGGTATA 61 CCTAGATATG CTGGCGGAAG CAAAGAAATA CGATCACAGA GAGCTGACTA AGAAGCAGGA 121 GCTTTTCTTT TTTCATCCAT TAAGCCCTGG AAGTTGCTTC TTTCTTCCAC ATGGTGCTCN 181 NGTATTTGCA ACAAACTGGG CTGGAATTCA TAAA Predicted gene structure (within gDNA segment 112691 to 109828): Exon 1 112171 112118 ( 54 n); cDNA 2 55 ( 54 n); score: 0.944 Intron 1 112117 111362 ( 756 n); Pd: 0.685 (s: 0.94), Pa: 0.997 (s: 0.88) Exon 2 111361 111273 ( 89 n); cDNA 56 144 ( 89 n); score: 0.921 Intron 2 111272 111159 ( 114 n); Pd: 0.999 (s: 0.98), Pa: 0.914 (s: 0.81) Exon 3 111158 111095 ( 64 n); cDNA 145 212 ( 68 n); score: 0.750 MATCH C08HBa0336I24.1- SGN-E258542+ 0.874 207 0.967 C PGS_C08HBa0336I24.1-_SGN-E258542+ (112171 112118,111361 111273,111158 111095) Alignment (genomic DNA sequence = upper lines): GAAAGCTTGC AAAGAGTTTA CGGAATATCT TATCCAGATA AGAAACAGTT GAAGGTGACT 112112 |||||||||| |||||||||| ||||||||| | ||||||| |||||||||| |||| GAAAGCTTGC AAAGAGTTTA TGGAATATCT TTTCCAGATC AGAAACAGTT GAAG...... 55 TTCAAAAGCT GGCTACGTCT TTTCTGCATT TAACTTCATC TGCCATTATG CCTTTCTGTA 112052 .......... .......... .......... .......... .......... .......... 55 ATAATCAGTA CAAAAAGATT TAAAATTTGT TTCCTAAAAA AGGACATGAA ACTGTAGACC 111992 .......... .......... .......... .......... .......... .......... 55 ACTTAATTTT CATATTCTTG ATATCTGCCC TGCCTTCAAT GGAGGAAATG GATAGAGAAT 111932 .......... .......... .......... .......... .......... .......... 55 AAAGAGGAAA TAATCCCTTA TATTGTGTGA GATGGTTTAG CTTTCAAAAT TATTTCTGGG 111872 .......... .......... .......... .......... .......... .......... 55 TGATAATCTT CGGAAACGAT TTATTCTTAT TTAAAGTATC TGATGTTGCA AAGCTGAATC 111812 .......... .......... .......... .......... .......... .......... 55 CTTCAATGTG TATCTGGCGT CACTTCTTGT GAGTTGTGAT TACATTACAA TTACGTTTAC 111752 .......... .......... .......... .......... .......... .......... 55 ACTTTTGGAC TTTGTTTGTG CTAGTTTGTT TATCCAATTA GGTGGCTTAT TCTGATTCTT 111692 .......... .......... .......... .......... .......... .......... 55 TTTCCTTGTT TGTCTAATAT TATATTTATA TATCCTTTTT AAGCATGTGA GTAAACTAGC 111632 .......... .......... .......... .......... .......... .......... 55 TCATTGTGCC TATACCTTTT CATTTTATCT ATATTTTTGT TGTCTCTTCT CTCTTTTTTT 111572 .......... .......... .......... .......... .......... .......... 55 TTTAGATAGT TTAGTGAGTT TGGTAGGAGA TGAAGCGCAG CCCACATGTC ACTGTATATT 111512 .......... .......... .......... .......... .......... .......... 55 ATTTGGGTGC TAGCTTGATG AATTAATGAA ATAATATTTT ATTTATCAGT AAAAGCAAAA 111452 .......... .......... .......... .......... .......... .......... 55 GGTAGAGTAT TTCTGTTATC CTGACTCTTG AGACAAGGTA AAAGTACCAC TTCCAGTGAG 111392 .......... .......... .......... .......... .......... .......... 55 GACTTTTTAG TAAAATAATT TCTGTTATAG GAATATCTGG CAATGCTGGA GGAAGCAAAG 111332 | ||| || | ||||||| |||||||||| .......... .......... .......... GTATACCTAG ATATGCTGGC GGAAGCAAAG 85 AAATACGATC ACAGAGAGCT GACTAAGAAG CAGGAGCTTT TCTTCTTTCA TCCATTAAGG 111272 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| ||||||||| AAATACGATC ACAGAGAGCT GACTAAGAAG CAGGAGCTTT TCTTTTTTCA TCCATTAAG. 144 TATGCCTTGA AATCATTTTA CCTTATTATA AAAAAAATGC AAGAAGGTGT GCCTTGTAAT 111212 .......... .......... .......... .......... .......... .......... 144 TCCCACTTAA GTGAAATATA TCATAACATT TAAATGTGAA TTGTGCATTC CAGCCCTGGA 111152 ||||||| .......... .......... .......... .......... .......... ...CCCTGGA 151 AGTTGTTTCT TTCTTCCACA TGGTGCGCGA G--TTTGCAA CAAA-T-TGC TGGAGTTCAT 111096 ||||| |||| |||||||||| |||||| | | ||||||| |||| | || |||| ||||| AGTTGCTTCT TTCTTCCACA TGGTGCTCNN GTATTTGCAA CAAACTGGGC TGGAATTCAT 211 A 111095 | A 212 hqPGS_C08HBa0336I24.1-_SGN-E258542+ (112171 112118,111361 111273,111158 111095) ******************************************************************************** EST sequence 200 +strand 749 n (File: SGN-E342692+) 1 CTCCTGGCTT CACCACTCTG TTGGCGCCTC TTCACCCAAT CCATCCGCCG TCCTCCGCCG 61 CCGTGCAAGC ACTTTTCCAT TCTCCGCCGC TGCTTCTCAT CTACGCCACC AATGGGAAAG 121 ACTGCGAAAA GTTGCGAAGC TAATTCTAGT GCATCAATCC CGAAAGACGA AACTTATCTA 181 GAGAATGTTA TTCCTAAACG TATCGCACTC TTCGAATCTA TCCAGAATCA GCAACGCCTT 241 CAACGACTTG CGCTCTCCCC TGATCCTATC AAGATTGAGT TAGTGGATGG GACAATTAAG 301 GAGGGAAAGA AATGGAATAC CACTCCATTG GATATAGCAA AGGAGATATC GAAGAGCTTG 361 GCTGCAAATG CGTTGATTGC GAAGGTGAAT GGGGTGCTTT GGGATTTGTC GAGGCCGTTG 421 GAAGGCGATT GTAAGCTAGA GATCTTTAAA TTTGAAACTG ATGAGGGACG CGACACATTT 481 TGGCACTCGA GTGCTCACAT TCTTGGAGAG TCGTTGGAAA GGACATTTGG ATGCAAATTG 541 TGCATTGGAC CGTGTACAAC AAGAGGAGAG GGGTTCTATT ATGATGCCTT TTATGGTGAT 601 CTGGGATTAA ATGAGGATCA TTTTCAACGG ATAAAGGANG AGGGCACAAA AGCTGTTTCG 661 GAGAAACAAC CTTTTGAACG CATTGAAGTT TCACGGCAGC AAGCTCTTGA TATGTTCTCT 721 GATAATAGGT TTAAAGTTGA AATCATTAA Predicted gene structure (within gDNA segment 118904 to 111679): Exon 1 115785 115673 ( 113 n); cDNA 160 272 ( 113 n); score: 0.850 Intron 1 115672 115090 ( 583 n); Pd: 1.000 (s: 0.88), Pa: 1.000 (s: 0.80) Exon 2 115089 114852 ( 238 n); cDNA 273 510 ( 238 n); score: 0.845 Intron 2 114851 114726 ( 126 n); Pd: 0.804 (s: 0.90), Pa: 0.898 (s: 0.86) Exon 3 114725 114666 ( 60 n); cDNA 511 570 ( 60 n); score: 0.883 Intron 3 114665 113484 (1182 n); Pd: 0.867 (s: 0.90), Pa: 0.986 (s: 0.94) Exon 4 113483 113394 ( 90 n); cDNA 571 660 ( 90 n); score: 0.856 Intron 4 113393 112621 ( 773 n); Pd: 0.990 (s: 0.80), Pa: 0.911 (s: 0.96) Exon 5 112620 112546 ( 75 n); cDNA 661 735 ( 75 n); score: 0.947 Intron 5 112545 112425 ( 121 n); Pd: 0.759 (s: 0.94), Pa: 0.960 (s: 0) Exon 6 112424 112412 ( 13 n); cDNA 736 748 ( 13 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E342692+ 0.865 589 0.786 C PGS_C08HBa0336I24.1-_SGN-E342692+ (115785 115673,115089 114852,114725 114666,113483 113394,112620 112546,112424 112412) Alignment (genomic DNA sequence = upper lines): CCCAGAGACG AAAATTATCT GGAAATTGTT GTTCCTAGAC GTATTGCACT CTTCGTATCT 115726 || | ||||| ||| |||||| || | |||| |||||| || |||| ||||| ||||| |||| CCGAAAGACG AAACTTATCT AGAGAATGTT ATTCCTAAAC GTATCGCACT CTTCGAATCT 219 ATTCAAAACC AGCAACGCCT TCAGCGCCTT TCACTCTCCC CTGATCCTAT CAAGTAAACT 115666 || || || | |||||||||| ||| || ||| | ||||||| |||||||||| ||| ATCCAGAATC AGCAACGCCT TCAACGACTT GCGCTCTCCC CTGATCCTAT CAA....... 272 CAAATAATTT CTCAAATTGT ATAATCTATT CTATTGTATT ACCACTCTTC ATAAAAATAA 115606 .......... .......... .......... .......... .......... .......... 272 TTTACTTCAG TTTGATTGTT CCGTTGAGTA TTTCTCAGTT AATTTTTACT GTAAAACGTT 115546 .......... .......... .......... .......... .......... .......... 272 GTGATTTTGT AGTATGTTTT GTATGTGTTA ATGATGTAAA CTTTGTTTAA AAAAGAACAG 115486 .......... .......... .......... .......... .......... .......... 272 GAAACCTTGT TGTAACTCAC TCAGAAAAGT AATTTAAAAG GATAAATATT TTTGATTACA 115426 .......... .......... .......... .......... .......... .......... 272 ACGAAGTGAT TTATGGTATT TATTTTTAGT TAACTTCTAT TTTAAAATTA GTTATAAGTA 115366 .......... .......... .......... .......... .......... .......... 272 TGACTTTATT GCTAGTGGCA GGCTCGCACA AAAATTGGCC TCCAGTATGA CCTTCATATT 115306 .......... .......... .......... .......... .......... .......... 272 CTTTTGAAAA AAAAAATAGT TGTTGTGATT TATAGTAGGT TTATGCATTT TCTAAATATG 115246 .......... .......... .......... .......... .......... .......... 272 CAAATTTTAG TTAAAAAATG TAAATTATGT TGGTAAATAC ATACAAAATT AGTGCTTTGA 115186 .......... .......... .......... .......... .......... .......... 272 GCATTGCCAT TCCTTTTTGA CGGAGGGAAT ATTTAATTTG GTAATTTTTT TTTTTAGTTA 115126 .......... .......... .......... .......... .......... .......... 272 AAATTTTGAA TGTTGGTTAT GATTGTGTTA AATTAGGATT GAATTACCGA ATGGAACTGT 115066 |||| || ||| | |||| || | .......... .......... .......... ......GATT GAGTTAGTGG ATGGGACAAT 296 GAAGGAGGGG AAGAAATGGA ATACAACGCC TTTGGATATA GCAAAGGAGA TATCGAAGAG 115006 |||||||| |||||||||| |||| || || ||||||||| |||||||||| |||||||||| TAAGGAGGGA AAGAAATGGA ATACCACTCC ATTGGATATA GCAAAGGAGA TATCGAAGAG 356 CTTGGGCTCC AATGCTTTGA TAGCAAAGGT GAATGGGGTG CTTTGGGATT TGTTGAGGCC 114946 ||||| | ||||| |||| | || ||||| |||||||||| |||||||||| ||| |||||| CTTGGCTGCA AATGCGTTGA TTGCGAAGGT GAATGGGGTG CTTTGGGATT TGTCGAGGCC 416 ATTGGAGAGT GACTGTAAGC TCGAGCTCTT CACTTTTGAC AGTGACGAGG GTCGCGACAC 114886 ||||| | || ||||||| | ||| |||| | ||||| | ||| |||| | |||||||| GTTGGAAGGC GATTGTAAGC TAGAGATCTT TAAATTTGAA ACTGATGAGG GACGCGACAC 476 GTTTTGGCAC TCGAGTGCGC ACATTCTTGG CGAGGTTGTA GCCCTTTGTC TACCACATTG 114826 ||||||||| |||||||| | |||||||||| ||| ATTTTGGCAC TCGAGTGCTC ACATTCTTGG AGAG...... .......... .......... 510 TGGTTGTCTC TTATCAAGTT TTGATTTTTG GAAATTGTTT TTAATAGAAT ATTTCTATGC 114766 .......... .......... .......... .......... .......... .......... 510 CCTTTATTAA GTTTTGATGT GTTTTTGGTG GTTTTCTTAG TCATTGGAGA GGAAATATGG 114706 || ||||| | ||| || ||| .......... .......... .......... .......... TCGTTGGAAA GGACATTTGG 530 CTGCAAATTG TGTATTGGAC CTTGTACAAC AAGAGGAGAG GTATCACATT TGCCTAATCT 114646 ||||||||| || ||||||| | |||||||| |||||||||| ATGCAAATTG TGCATTGGAC CGTGTACAAC AAGAGGAGAG .......... .......... 570 TAAATACTGA AGTTTCTTTT TTAGGGGTCT TTTGGTAGAG TGTATTAGGA AAAACAATGC 114586 .......... .......... .......... .......... .......... .......... 570 ATGTATTAGC TGTACTAGTA CCTTGTTTGA TACTCTTTTT CAACCTATGT ATAACTTATG 114526 .......... .......... .......... .......... .......... .......... 570 CTTATTATAC ACTCTATTGC GTATTAAGGT GTGTATTGCT AATACCATGA ATTTCTCTGT 114466 .......... .......... .......... .......... .......... .......... 570 ATTAGCAATA CAATGGTTTT ATGCATGCAT TAACATGCTA AAAGATCCAA TTGCCCCTCC 114406 .......... .......... .......... .......... .......... .......... 570 AAACCTTTTT TACATTTTTC CCACCATAAT AGTGGAGGGT GTCTTTCTAA ATAATTTTTT 114346 .......... .......... .......... .......... .......... .......... 570 TTATGCAATG CACATCAAAC CAAACAATGC ATTAAAATAA TATATGTATA ATTAATGGAA 114286 .......... .......... .......... .......... .......... .......... 570 GCATAACTAA TACATGCATT GCTAATACAA ACATACCAAT GCATTCTATT CAACATTATT 114226 .......... .......... .......... .......... .......... .......... 570 CTCATACACT CTACCAAACG ACCCCTTATA GTTTAGAAGT TCTCTGAAAT CTGAGACAAA 114166 .......... .......... .......... .......... .......... .......... 570 ATTATCTAGT ATTGGAATGA AGTGGAACCG AACAGAGCAG GATGGAGGAG GATTCATATA 114106 .......... .......... .......... .......... .......... .......... 570 GTTGATGACA TTGTGGCATA GTTGATTGAT TAGTTTTGGG GTCTACATCA TGCTATGCTA 114046 .......... .......... .......... .......... .......... .......... 570 CCTTTTCTTA TCTTGCATGG CTGATGGAAT TTTGGCAGAA CTATTTTTCT TCTGTATTAA 113986 .......... .......... .......... .......... .......... .......... 570 TTGATTAAAG TGAAAATAGC TAGCAAGCTA ATTATAAGCT TAAGTAGTTT CCAAAAAATA 113926 .......... .......... .......... .......... .......... .......... 570 ATTCAACTTT GGTTGGTACT TGTTGCTTAA CCGCTTTATT TGATAGCTAA TCTCCTGGTA 113866 .......... .......... .......... .......... .......... .......... 570 AATACCTTGG GACGATTCTA TGTCCCACCT TTAGTATCCG TAGTTGCTGC ATTAACTTCA 113806 .......... .......... .......... .......... .......... .......... 570 GGCATAACCT ATGTTGATTT TCCGGTTGAA AGAGCAATCC TAAGAAAAAA AAATCCCAAG 113746 .......... .......... .......... .......... .......... .......... 570 AAACTATCCT CAGTACTATC ATTTAGTGTG GCATTTCATC GTTTGAGCCT AACATATTAT 113686 .......... .......... .......... .......... .......... .......... 570 TGATGAACTA ACTTCTTAAG AAATCCATAT TCCTTGAAAT GAGTTGGGCA AATTTAGATA 113626 .......... .......... .......... .......... .......... .......... 570 ACATTGTTAT TCTCAAAAAA ACTAAATGAG ATAACATTGT TCCACTACTT GCTCCCTCCT 113566 .......... .......... .......... .......... .......... .......... 570 CTCTTTCTCT CATTATAGTT TATTCTTTAC TTAGTTCATA TTGCTTCCAA TCTGTTATGA 113506 .......... .......... .......... .......... .......... .......... 570 CATGTCAAAA CTGCCTCTGC AGGGTTTCTA TTATGATGCC TTTTACGGTG ATCTGGGGTT 113446 || ||||| |||||||||| ||||| |||| ||||||| || .......... .......... ..GGGTTCTA TTATGATGCC TTTTATGGTG ATCTGGGATT 608 AAATGAGGAT CATTTTAAAG GGATTGAGGC AGAGGCAGCA AAAGCTGTAT CGGTATTACT 113386 |||||||||| |||||| || |||| ||| |||| || |||||||| | || AAATGAGGAT CATTTTCAAC GGATAAAGGA NGAGGGCACA AAAGCTGTTT CG........ 660 CTTTTATCTG TCAGAGTTGC CTTTGATCAA ATGACCATAA GTTAACTGCT TGCTGCCTCT 113326 .......... .......... .......... .......... .......... .......... 660 TGAATTTTAT ACTTCCACAC TTCTGTCTTT TGGAGTTTCT ATTTCCTGAT TGATTGTAAA 113266 .......... .......... .......... .......... .......... .......... 660 AAGGGATCGA ATGTTTTTGG TTGAGTATTA TGTTTCTCGT TACTCTGATG TGATTTTTTT 113206 .......... .......... .......... .......... .......... .......... 660 TGATTGATGA CTTCCATGTG ATTATAAACT TGGTGAAAGA TTTTACTTTC TGTGCTATAT 113146 .......... .......... .......... .......... .......... .......... 660 GGTTAGAAAG TTGGTAAAAA GGAAAGTGCA TTTCAACAAA TTTGATATGT TTTGTGCCAG 113086 .......... .......... .......... .......... .......... .......... 660 TCTTTTGTCA AGTGAATTCA AAACAGAATC GTCTGTGCTG ATGCTGAACT AAGAGCGATT 113026 .......... .......... .......... .......... .......... .......... 660 CTTCAGTTAA GTTAATTGTT GGGATGTCTC CAACCCTGTT AATGAATATT CAACAGAGCA 112966 .......... .......... .......... .......... .......... .......... 660 GGATCAATAT TTATACTGTG GTGGACACAG CTGCACCCTA CCAATTATTT GGATCTTTTT 112906 .......... .......... .......... .......... .......... .......... 660 TTGTATATGC TCTCCAACGA TAGATGAATC TTCTTCCATC TATGATCCTA AATACATACT 112846 .......... .......... .......... .......... .......... .......... 660 TCATCAGCGA GGCAACCATA TGATTGTACC AAAGTGTAAG ATAGAGATAT AAGAATAATA 112786 .......... .......... .......... .......... .......... .......... 660 GGCACTGTTA AAGATCTATA TCATCACTCA ATTAGCACCT CATTAGTTTA TCTTCTCTTT 112726 .......... .......... .......... .......... .......... .......... 660 TCTGATTAGC AATGGCTACA ATGCTCTTTC CTGTTGCTGC AGTATGTTGT TTATTTTTTT 112666 .......... .......... .......... .......... .......... .......... 660 CCTGCATTAT TTCCAGCATG CGACTAACTT CCCTTGATTT CGCAGGAGAA ACAGCCTTTT 112606 ||||| ||| |||||| .......... .......... .......... .......... .....GAGAA ACAACCTTTT 675 GAACGCATTG AAGTTTCACG GCAACAAGCT CTTGATATGT TCTCTGAAAA TAGGTTTAAG 112546 |||||||||| |||||||||| ||| |||||| |||||||||| ||||||| || ||||||||| GAACGCATTG AAGTTTCACG GCAGCAAGCT CTTGATATGT TCTCTGATAA TAGGTTTAAA 735 GTTAAATTGC TGTGATCTTG CAGTCCTAAA CCTTCCAGGC TTTTCTTTGT GCAACAATTT 112486 .......... .......... .......... .......... .......... .......... 735 TTAGGAAATG TTCTCTCCTG TGATCTCACA TCTCAAATTT TTTCCCCTAT ATTTTAATTA 112426 .......... .......... .......... .......... .......... .......... 735 GGTTGAAATC ATTA 112412 ||||||||| |||| .GTTGAAATC ATTA 748 hqPGS_C08HBa0336I24.1-_SGN-E342692+ (115785 115673,115089 114852,114725 114666,113483 113394,112620 112546,112424 112412) ******************************************************************************** EST sequence 231 +strand 474 n (File: SGN-E336392+) 1 TCCTATCAAG ATTGAGTTAG TGGATGGGAC AATTAAGGAG GGAAAGAAAT GGAATACCAC 61 TCCATTGGAT ATAGCAAAGG AGATATCGAA GAGCTTGGCT GCAAATGCGT TGATTGCGAA 121 GGTGAATGGG GTGCTTTGGG ATTTGTCGAG GCCGTTGGAA GGCGATTGTA AGCTAGAGAT 181 CTTTAAATTT GAAACTGATG AGGGACGCGA CACATTTTGG CACTCGAGTG CTCACATTCT 241 TGGAGAGTCG TTGGAAAGGA CATTTGGATG CAAATTGTGC ATTGGACCGT GTACAACAAG 301 AGGAGAGGGG TTCTATTATG ATGCCTTTTA TGGTGATCTG GGATTAAATG AGGATCATTT 361 TCAACGGATA AAGGAGGAGG CAACAAAAGC TGTTTCGGAG AAACAACCTT TTGAACGCAT 421 TGAAGTTTCA CGGCAGCAAG CTCTTGATAT GTTCTCTGAT AATAGGTTTA AGGT Predicted gene structure (within gDNA segment 116274 to 111799): Exon 1 115681 115673 ( 9 n); cDNA 1 9 ( 9 n); score: 1.000 Intron 1 115672 115090 ( 583 n); Pd: 1.000 (s: 0), Pa: 1.000 (s: 0.80) Exon 2 115089 114852 ( 238 n); cDNA 10 247 ( 238 n); score: 0.845 Intron 2 114851 114726 ( 126 n); Pd: 0.804 (s: 0.90), Pa: 0.898 (s: 0.86) Exon 3 114725 114666 ( 60 n); cDNA 248 307 ( 60 n); score: 0.883 Intron 3 114665 113484 (1182 n); Pd: 0.867 (s: 0.90), Pa: 0.986 (s: 0.94) Exon 4 113483 113394 ( 90 n); cDNA 308 397 ( 90 n); score: 0.878 Intron 4 113393 112621 ( 773 n); Pd: 0.990 (s: 0.84), Pa: 0.911 (s: 0.96) Exon 5 112620 112546 ( 75 n); cDNA 398 472 ( 75 n); score: 0.960 MATCH C08HBa0336I24.1- SGN-E336392+ 0.875 472 0.996 C PGS_C08HBa0336I24.1-_SGN-E336392+ (115681 115673,115089 114852,114725 114666,113483 113394,112620 112546) Alignment (genomic DNA sequence = upper lines): TCCTATCAAG TAAACTCAAA TAATTTCTCA AATTGTATAA TCTATTCTAT TGTATTACCA 115622 ||||||||| TCCTATCAA. .......... .......... .......... .......... .......... 9 CTCTTCATAA AAATAATTTA CTTCAGTTTG ATTGTTCCGT TGAGTATTTC TCAGTTAATT 115562 .......... .......... .......... .......... .......... .......... 9 TTTACTGTAA AACGTTGTGA TTTTGTAGTA TGTTTTGTAT GTGTTAATGA TGTAAACTTT 115502 .......... .......... .......... .......... .......... .......... 9 GTTTAAAAAA GAACAGGAAA CCTTGTTGTA ACTCACTCAG AAAAGTAATT TAAAAGGATA 115442 .......... .......... .......... .......... .......... .......... 9 AATATTTTTG ATTACAACGA AGTGATTTAT GGTATTTATT TTTAGTTAAC TTCTATTTTA 115382 .......... .......... .......... .......... .......... .......... 9 AAATTAGTTA TAAGTATGAC TTTATTGCTA GTGGCAGGCT CGCACAAAAA TTGGCCTCCA 115322 .......... .......... .......... .......... .......... .......... 9 GTATGACCTT CATATTCTTT TGAAAAAAAA AATAGTTGTT GTGATTTATA GTAGGTTTAT 115262 .......... .......... .......... .......... .......... .......... 9 GCATTTTCTA AATATGCAAA TTTTAGTTAA AAAATGTAAA TTATGTTGGT AAATACATAC 115202 .......... .......... .......... .......... .......... .......... 9 AAAATTAGTG CTTTGAGCAT TGCCATTCCT TTTTGACGGA GGGAATATTT AATTTGGTAA 115142 .......... .......... .......... .......... .......... .......... 9 TTTTTTTTTT TAGTTAAAAT TTTGAATGTT GGTTATGATT GTGTTAAATT AGGATTGAAT 115082 |||||| | .......... .......... .......... .......... .......... ..GATTGAGT 17 TACCGAATGG AACTGTGAAG GAGGGGAAGA AATGGAATAC AACGCCTTTG GATATAGCAA 115022 || | |||| || | ||| ||||| |||| |||||||||| || || ||| |||||||||| TAGTGGATGG GACAATTAAG GAGGGAAAGA AATGGAATAC CACTCCATTG GATATAGCAA 77 AGGAGATATC GAAGAGCTTG GGCTCCAATG CTTTGATAGC AAAGGTGAAT GGGGTGCTTT 114962 |||||||||| |||||||||| | | |||| | ||||| || ||||||||| |||||||||| AGGAGATATC GAAGAGCTTG GCTGCAAATG CGTTGATTGC GAAGGTGAAT GGGGTGCTTT 137 GGGATTTGTT GAGGCCATTG GAGAGTGACT GTAAGCTCGA GCTCTTCACT TTTGACAGTG 114902 ||||||||| |||||| ||| || | || | ||||||| || | |||| | ||||| | || GGGATTTGTC GAGGCCGTTG GAAGGCGATT GTAAGCTAGA GATCTTTAAA TTTGAAACTG 197 ACGAGGGTCG CGACACGTTT TGGCACTCGA GTGCGCACAT TCTTGGCGAG GTTGTAGCCC 114842 | ||||| || |||||| ||| |||||||||| |||| ||||| |||||| ||| ATGAGGGACG CGACACATTT TGGCACTCGA GTGCTCACAT TCTTGGAGAG .......... 247 TTTGTCTACC ACATTGTGGT TGTCTCTTAT CAAGTTTTGA TTTTTGGAAA TTGTTTTTAA 114782 .......... .......... .......... .......... .......... .......... 247 TAGAATATTT CTATGCCCTT TATTAAGTTT TGATGTGTTT TTGGTGGTTT TCTTAGTCAT 114722 || | .......... .......... .......... .......... .......... ......TCGT 251 TGGAGAGGAA ATATGGCTGC AAATTGTGTA TTGGACCTTG TACAACAAGA GGAGAGGTAT 114662 |||| |||| || ||| ||| |||||||| | ||||||| || |||||||||| |||||| TGGAAAGGAC ATTTGGATGC AAATTGTGCA TTGGACCGTG TACAACAAGA GGAGAG.... 307 CACATTTGCC TAATCTTAAA TACTGAAGTT TCTTTTTTAG GGGTCTTTTG GTAGAGTGTA 114602 .......... .......... .......... .......... .......... .......... 307 TTAGGAAAAA CAATGCATGT ATTAGCTGTA CTAGTACCTT GTTTGATACT CTTTTTCAAC 114542 .......... .......... .......... .......... .......... .......... 307 CTATGTATAA CTTATGCTTA TTATACACTC TATTGCGTAT TAAGGTGTGT ATTGCTAATA 114482 .......... .......... .......... .......... .......... .......... 307 CCATGAATTT CTCTGTATTA GCAATACAAT GGTTTTATGC ATGCATTAAC ATGCTAAAAG 114422 .......... .......... .......... .......... .......... .......... 307 ATCCAATTGC CCCTCCAAAC CTTTTTTACA TTTTTCCCAC CATAATAGTG GAGGGTGTCT 114362 .......... .......... .......... .......... .......... .......... 307 TTCTAAATAA TTTTTTTTAT GCAATGCACA TCAAACCAAA CAATGCATTA AAATAATATA 114302 .......... .......... .......... .......... .......... .......... 307 TGTATAATTA ATGGAAGCAT AACTAATACA TGCATTGCTA ATACAAACAT ACCAATGCAT 114242 .......... .......... .......... .......... .......... .......... 307 TCTATTCAAC ATTATTCTCA TACACTCTAC CAAACGACCC CTTATAGTTT AGAAGTTCTC 114182 .......... .......... .......... .......... .......... .......... 307 TGAAATCTGA GACAAAATTA TCTAGTATTG GAATGAAGTG GAACCGAACA GAGCAGGATG 114122 .......... .......... .......... .......... .......... .......... 307 GAGGAGGATT CATATAGTTG ATGACATTGT GGCATAGTTG ATTGATTAGT TTTGGGGTCT 114062 .......... .......... .......... .......... .......... .......... 307 ACATCATGCT ATGCTACCTT TTCTTATCTT GCATGGCTGA TGGAATTTTG GCAGAACTAT 114002 .......... .......... .......... .......... .......... .......... 307 TTTTCTTCTG TATTAATTGA TTAAAGTGAA AATAGCTAGC AAGCTAATTA TAAGCTTAAG 113942 .......... .......... .......... .......... .......... .......... 307 TAGTTTCCAA AAAATAATTC AACTTTGGTT GGTACTTGTT GCTTAACCGC TTTATTTGAT 113882 .......... .......... .......... .......... .......... .......... 307 AGCTAATCTC CTGGTAAATA CCTTGGGACG ATTCTATGTC CCACCTTTAG TATCCGTAGT 113822 .......... .......... .......... .......... .......... .......... 307 TGCTGCATTA ACTTCAGGCA TAACCTATGT TGATTTTCCG GTTGAAAGAG CAATCCTAAG 113762 .......... .......... .......... .......... .......... .......... 307 AAAAAAAAAT CCCAAGAAAC TATCCTCAGT ACTATCATTT AGTGTGGCAT TTCATCGTTT 113702 .......... .......... .......... .......... .......... .......... 307 GAGCCTAACA TATTATTGAT GAACTAACTT CTTAAGAAAT CCATATTCCT TGAAATGAGT 113642 .......... .......... .......... .......... .......... .......... 307 TGGGCAAATT TAGATAACAT TGTTATTCTC AAAAAAACTA AATGAGATAA CATTGTTCCA 113582 .......... .......... .......... .......... .......... .......... 307 CTACTTGCTC CCTCCTCTCT TTCTCTCATT ATAGTTTATT CTTTACTTAG TTCATATTGC 113522 .......... .......... .......... .......... .......... .......... 307 TTCCAATCTG TTATGACATG TCAAAACTGC CTCTGCAGGG TTTCTATTAT GATGCCTTTT 113462 || ||||||||| |||||||||| .......... .......... .......... ........GG GTTCTATTAT GATGCCTTTT 329 ACGGTGATCT GGGGTTAAAT GAGGATCATT TTAAAGGGAT TGAGGCAGAG GCAGCAAAAG 113402 | |||||||| ||| |||||| |||||||||| || || |||| ||| ||| ||| |||||| ATGGTGATCT GGGATTAAAT GAGGATCATT TTCAACGGAT AAAGGAGGAG GCAACAAAAG 389 CTGTATCGGT ATTACTCTTT TATCTGTCAG AGTTGCCTTT GATCAAATGA CCATAAGTTA 113342 |||| ||| CTGTTTCG.. .......... .......... .......... .......... .......... 397 ACTGCTTGCT GCCTCTTGAA TTTTATACTT CCACACTTCT GTCTTTTGGA GTTTCTATTT 113282 .......... .......... .......... .......... .......... .......... 397 CCTGATTGAT TGTAAAAAGG GATCGAATGT TTTTGGTTGA GTATTATGTT TCTCGTTACT 113222 .......... .......... .......... .......... .......... .......... 397 CTGATGTGAT TTTTTTTGAT TGATGACTTC CATGTGATTA TAAACTTGGT GAAAGATTTT 113162 .......... .......... .......... .......... .......... .......... 397 ACTTTCTGTG CTATATGGTT AGAAAGTTGG TAAAAAGGAA AGTGCATTTC AACAAATTTG 113102 .......... .......... .......... .......... .......... .......... 397 ATATGTTTTG TGCCAGTCTT TTGTCAAGTG AATTCAAAAC AGAATCGTCT GTGCTGATGC 113042 .......... .......... .......... .......... .......... .......... 397 TGAACTAAGA GCGATTCTTC AGTTAAGTTA ATTGTTGGGA TGTCTCCAAC CCTGTTAATG 112982 .......... .......... .......... .......... .......... .......... 397 AATATTCAAC AGAGCAGGAT CAATATTTAT ACTGTGGTGG ACACAGCTGC ACCCTACCAA 112922 .......... .......... .......... .......... .......... .......... 397 TTATTTGGAT CTTTTTTTGT ATATGCTCTC CAACGATAGA TGAATCTTCT TCCATCTATG 112862 .......... .......... .......... .......... .......... .......... 397 ATCCTAAATA CATACTTCAT CAGCGAGGCA ACCATATGAT TGTACCAAAG TGTAAGATAG 112802 .......... .......... .......... .......... .......... .......... 397 AGATATAAGA ATAATAGGCA CTGTTAAAGA TCTATATCAT CACTCAATTA GCACCTCATT 112742 .......... .......... .......... .......... .......... .......... 397 AGTTTATCTT CTCTTTTCTG ATTAGCAATG GCTACAATGC TCTTTCCTGT TGCTGCAGTA 112682 .......... .......... .......... .......... .......... .......... 397 TGTTGTTTAT TTTTTTCCTG CATTATTTCC AGCATGCGAC TAACTTCCCT TGATTTCGCA 112622 .......... .......... .......... .......... .......... .......... 397 GGAGAAACAG CCTTTTGAAC GCATTGAAGT TTCACGGCAA CAAGCTCTTG ATATGTTCTC 112562 |||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| .GAGAAACAA CCTTTTGAAC GCATTGAAGT TTCACGGCAG CAAGCTCTTG ATATGTTCTC 456 TGAAAATAGG TTTAAG 112546 ||| |||||| |||||| TGATAATAGG TTTAAG 472 hqPGS_C08HBa0336I24.1-_SGN-E336392+ (115089 114852,114725 114666,113483 113394,112620 112546) ******************************************************************************** EST sequence 233 +strand 544 n (File: SGN-E312208+) 1 GAGAATGTTA TTCCTAAACG TATCGCACTC TTCGAATCTA TGCAGAATCG GCAACGCCTT 61 CAACGACTTG CGCTCTCCCC TGATCCTATC AAGATTGAGT TAGTGGATGG GACAATTAAG 121 GAGGGAAAGA AATGGAATAC CACTCCATTG GATATAGCAA AGGAGATATC GAAGAGCTTG 181 GCTGCAAATG CGTTGATTGC GAAGGTGAAT GGGGTGCTTT GGGATTTGTC GAGGCCGTTG 241 GAAGGCGATT GTAAGCTAGA GATCTTTAAA TTTGAAACTG ATGAGGGACG CGACACATTT 301 TGGCACTCGA GTGCTCACAT TCTTGGAGAG TCGTTGGAAA GGACATTTGG ATGCAAATTG 361 TGCATTGGAC CGTGTACAAC AAGAGGAGAG GGGTTCTATT ATGATGCCTT TTATGGTGAT 421 CTGGGATTAA ATGAGGATCA TTTTCAACGG ATAAAGGAGG AGGCAACAAA AGCTGTTTCG 481 GAGAAACAAC CTTTTGAACG CATTGAAGTT TCACGGCAGC AAGCTCTTGA TATGTTCTCT 541 GATA Predicted gene structure (within gDNA segment 117104 to 111929): Exon 1 115764 115673 ( 92 n); cDNA 1 92 ( 92 n); score: 0.848 Intron 1 115672 115090 ( 583 n); Pd: 1.000 (s: 0.86), Pa: 1.000 (s: 0.80) Exon 2 115089 114852 ( 238 n); cDNA 93 330 ( 238 n); score: 0.845 Intron 2 114851 114726 ( 126 n); Pd: 0.804 (s: 0.90), Pa: 0.898 (s: 0.86) Exon 3 114725 114666 ( 60 n); cDNA 331 390 ( 60 n); score: 0.883 Intron 3 114665 113484 (1182 n); Pd: 0.867 (s: 0.90), Pa: 0.986 (s: 0.94) Exon 4 113483 113394 ( 90 n); cDNA 391 480 ( 90 n); score: 0.878 Intron 4 113393 112621 ( 773 n); Pd: 0.990 (s: 0.84), Pa: 0.911 (s: 0.96) Exon 5 112620 112559 ( 62 n); cDNA 481 542 ( 62 n); score: 0.968 MATCH C08HBa0336I24.1- SGN-E312208+ 0.869 542 0.996 C PGS_C08HBa0336I24.1-_SGN-E312208+ (115764 115673,115089 114852,114725 114666,113483 113394,112620 112559) Alignment (genomic DNA sequence = upper lines): GAAATTGTTG TTCCTAGACG TATTGCACTC TTCGTATCTA TTCAAAACCA GCAACGCCTT 115705 || | |||| |||||| ||| ||| |||||| |||| ||||| | || || | |||||||||| GAGAATGTTA TTCCTAAACG TATCGCACTC TTCGAATCTA TGCAGAATCG GCAACGCCTT 60 CAGCGCCTTT CACTCTCCCC TGATCCTATC AAGTAAACTC AAATAATTTC TCAAATTGTA 115645 || || ||| | |||||||| |||||||||| || CAACGACTTG CGCTCTCCCC TGATCCTATC AA........ .......... .......... 92 TAATCTATTC TATTGTATTA CCACTCTTCA TAAAAATAAT TTACTTCAGT TTGATTGTTC 115585 .......... .......... .......... .......... .......... .......... 92 CGTTGAGTAT TTCTCAGTTA ATTTTTACTG TAAAACGTTG TGATTTTGTA GTATGTTTTG 115525 .......... .......... .......... .......... .......... .......... 92 TATGTGTTAA TGATGTAAAC TTTGTTTAAA AAAGAACAGG AAACCTTGTT GTAACTCACT 115465 .......... .......... .......... .......... .......... .......... 92 CAGAAAAGTA ATTTAAAAGG ATAAATATTT TTGATTACAA CGAAGTGATT TATGGTATTT 115405 .......... .......... .......... .......... .......... .......... 92 ATTTTTAGTT AACTTCTATT TTAAAATTAG TTATAAGTAT GACTTTATTG CTAGTGGCAG 115345 .......... .......... .......... .......... .......... .......... 92 GCTCGCACAA AAATTGGCCT CCAGTATGAC CTTCATATTC TTTTGAAAAA AAAAATAGTT 115285 .......... .......... .......... .......... .......... .......... 92 GTTGTGATTT ATAGTAGGTT TATGCATTTT CTAAATATGC AAATTTTAGT TAAAAAATGT 115225 .......... .......... .......... .......... .......... .......... 92 AAATTATGTT GGTAAATACA TACAAAATTA GTGCTTTGAG CATTGCCATT CCTTTTTGAC 115165 .......... .......... .......... .......... .......... .......... 92 GGAGGGAATA TTTAATTTGG TAATTTTTTT TTTTAGTTAA AATTTTGAAT GTTGGTTATG 115105 .......... .......... .......... .......... .......... .......... 92 ATTGTGTTAA ATTAGGATTG AATTACCGAA TGGAACTGTG AAGGAGGGGA AGAAATGGAA 115045 ||||| | ||| | | ||| || | |||||||| | |||||||||| .......... .....GATTG AGTTAGTGGA TGGGACAATT AAGGAGGGAA AGAAATGGAA 137 TACAACGCCT TTGGATATAG CAAAGGAGAT ATCGAAGAGC TTGGGCTCCA ATGCTTTGAT 114985 ||| || || |||||||||| |||||||||| |||||||||| |||| | | |||| ||||| TACCACTCCA TTGGATATAG CAAAGGAGAT ATCGAAGAGC TTGGCTGCAA ATGCGTTGAT 197 AGCAAAGGTG AATGGGGTGC TTTGGGATTT GTTGAGGCCA TTGGAGAGTG ACTGTAAGCT 114925 || |||||| |||||||||| |||||||||| || |||||| ||||| | | | |||||||| TGCGAAGGTG AATGGGGTGC TTTGGGATTT GTCGAGGCCG TTGGAAGGCG ATTGTAAGCT 257 CGAGCTCTTC ACTTTTGACA GTGACGAGGG TCGCGACACG TTTTGGCACT CGAGTGCGCA 114865 ||| |||| | ||||| | ||| ||||| |||||||| |||||||||| ||||||| || AGAGATCTTT AAATTTGAAA CTGATGAGGG ACGCGACACA TTTTGGCACT CGAGTGCTCA 317 CATTCTTGGC GAGGTTGTAG CCCTTTGTCT ACCACATTGT GGTTGTCTCT TATCAAGTTT 114805 ||||||||| ||| CATTCTTGGA GAG....... .......... .......... .......... .......... 330 TGATTTTTGG AAATTGTTTT TAATAGAATA TTTCTATGCC CTTTATTAAG TTTTGATGTG 114745 .......... .......... .......... .......... .......... .......... 330 TTTTTGGTGG TTTTCTTAGT CATTGGAGAG GAAATATGGC TGCAAATTGT GTATTGGACC 114685 | | ||||| || || || ||| |||||||||| | |||||||| .......... .........T CGTTGGAAAG GACATTTGGA TGCAAATTGT GCATTGGACC 371 TTGTACAACA AGAGGAGAGG TATCACATTT GCCTAATCTT AAATACTGAA GTTTCTTTTT 114625 ||||||||| ||||||||| GTGTACAACA AGAGGAGAG. .......... .......... .......... .......... 390 TAGGGGTCTT TTGGTAGAGT GTATTAGGAA AAACAATGCA TGTATTAGCT GTACTAGTAC 114565 .......... .......... .......... .......... .......... .......... 390 CTTGTTTGAT ACTCTTTTTC AACCTATGTA TAACTTATGC TTATTATACA CTCTATTGCG 114505 .......... .......... .......... .......... .......... .......... 390 TATTAAGGTG TGTATTGCTA ATACCATGAA TTTCTCTGTA TTAGCAATAC AATGGTTTTA 114445 .......... .......... .......... .......... .......... .......... 390 TGCATGCATT AACATGCTAA AAGATCCAAT TGCCCCTCCA AACCTTTTTT ACATTTTTCC 114385 .......... .......... .......... .......... .......... .......... 390 CACCATAATA GTGGAGGGTG TCTTTCTAAA TAATTTTTTT TATGCAATGC ACATCAAACC 114325 .......... .......... .......... .......... .......... .......... 390 AAACAATGCA TTAAAATAAT ATATGTATAA TTAATGGAAG CATAACTAAT ACATGCATTG 114265 .......... .......... .......... .......... .......... .......... 390 CTAATACAAA CATACCAATG CATTCTATTC AACATTATTC TCATACACTC TACCAAACGA 114205 .......... .......... .......... .......... .......... .......... 390 CCCCTTATAG TTTAGAAGTT CTCTGAAATC TGAGACAAAA TTATCTAGTA TTGGAATGAA 114145 .......... .......... .......... .......... .......... .......... 390 GTGGAACCGA ACAGAGCAGG ATGGAGGAGG ATTCATATAG TTGATGACAT TGTGGCATAG 114085 .......... .......... .......... .......... .......... .......... 390 TTGATTGATT AGTTTTGGGG TCTACATCAT GCTATGCTAC CTTTTCTTAT CTTGCATGGC 114025 .......... .......... .......... .......... .......... .......... 390 TGATGGAATT TTGGCAGAAC TATTTTTCTT CTGTATTAAT TGATTAAAGT GAAAATAGCT 113965 .......... .......... .......... .......... .......... .......... 390 AGCAAGCTAA TTATAAGCTT AAGTAGTTTC CAAAAAATAA TTCAACTTTG GTTGGTACTT 113905 .......... .......... .......... .......... .......... .......... 390 GTTGCTTAAC CGCTTTATTT GATAGCTAAT CTCCTGGTAA ATACCTTGGG ACGATTCTAT 113845 .......... .......... .......... .......... .......... .......... 390 GTCCCACCTT TAGTATCCGT AGTTGCTGCA TTAACTTCAG GCATAACCTA TGTTGATTTT 113785 .......... .......... .......... .......... .......... .......... 390 CCGGTTGAAA GAGCAATCCT AAGAAAAAAA AATCCCAAGA AACTATCCTC AGTACTATCA 113725 .......... .......... .......... .......... .......... .......... 390 TTTAGTGTGG CATTTCATCG TTTGAGCCTA ACATATTATT GATGAACTAA CTTCTTAAGA 113665 .......... .......... .......... .......... .......... .......... 390 AATCCATATT CCTTGAAATG AGTTGGGCAA ATTTAGATAA CATTGTTATT CTCAAAAAAA 113605 .......... .......... .......... .......... .......... .......... 390 CTAAATGAGA TAACATTGTT CCACTACTTG CTCCCTCCTC TCTTTCTCTC ATTATAGTTT 113545 .......... .......... .......... .......... .......... .......... 390 ATTCTTTACT TAGTTCATAT TGCTTCCAAT CTGTTATGAC ATGTCAAAAC TGCCTCTGCA 113485 .......... .......... .......... .......... .......... .......... 390 GGGTTTCTAT TATGATGCCT TTTACGGTGA TCTGGGGTTA AATGAGGATC ATTTTAAAGG 113425 || |||||| |||||||||| |||| ||||| |||||| ||| |||||||||| ||||| || | .GGGTTCTAT TATGATGCCT TTTATGGTGA TCTGGGATTA AATGAGGATC ATTTTCAACG 449 GATTGAGGCA GAGGCAGCAA AAGCTGTATC GGTATTACTC TTTTATCTGT CAGAGTTGCC 113365 ||| ||| |||||| ||| ||||||| || | GATAAAGGAG GAGGCAACAA AAGCTGTTTC G......... .......... .......... 480 TTTGATCAAA TGACCATAAG TTAACTGCTT GCTGCCTCTT GAATTTTATA CTTCCACACT 113305 .......... .......... .......... .......... .......... .......... 480 TCTGTCTTTT GGAGTTTCTA TTTCCTGATT GATTGTAAAA AGGGATCGAA TGTTTTTGGT 113245 .......... .......... .......... .......... .......... .......... 480 TGAGTATTAT GTTTCTCGTT ACTCTGATGT GATTTTTTTT GATTGATGAC TTCCATGTGA 113185 .......... .......... .......... .......... .......... .......... 480 TTATAAACTT GGTGAAAGAT TTTACTTTCT GTGCTATATG GTTAGAAAGT TGGTAAAAAG 113125 .......... .......... .......... .......... .......... .......... 480 GAAAGTGCAT TTCAACAAAT TTGATATGTT TTGTGCCAGT CTTTTGTCAA GTGAATTCAA 113065 .......... .......... .......... .......... .......... .......... 480 AACAGAATCG TCTGTGCTGA TGCTGAACTA AGAGCGATTC TTCAGTTAAG TTAATTGTTG 113005 .......... .......... .......... .......... .......... .......... 480 GGATGTCTCC AACCCTGTTA ATGAATATTC AACAGAGCAG GATCAATATT TATACTGTGG 112945 .......... .......... .......... .......... .......... .......... 480 TGGACACAGC TGCACCCTAC CAATTATTTG GATCTTTTTT TGTATATGCT CTCCAACGAT 112885 .......... .......... .......... .......... .......... .......... 480 AGATGAATCT TCTTCCATCT ATGATCCTAA ATACATACTT CATCAGCGAG GCAACCATAT 112825 .......... .......... .......... .......... .......... .......... 480 GATTGTACCA AAGTGTAAGA TAGAGATATA AGAATAATAG GCACTGTTAA AGATCTATAT 112765 .......... .......... .......... .......... .......... .......... 480 CATCACTCAA TTAGCACCTC ATTAGTTTAT CTTCTCTTTT CTGATTAGCA ATGGCTACAA 112705 .......... .......... .......... .......... .......... .......... 480 TGCTCTTTCC TGTTGCTGCA GTATGTTGTT TATTTTTTTC CTGCATTATT TCCAGCATGC 112645 .......... .......... .......... .......... .......... .......... 480 GACTAACTTC CCTTGATTTC GCAGGAGAAA CAGCCTTTTG AACGCATTGA AGTTTCACGG 112585 |||||| || ||||||| |||||||||| |||||||||| .......... .......... ....GAGAAA CAACCTTTTG AACGCATTGA AGTTTCACGG 516 CAACAAGCTC TTGATATGTT CTCTGA 112559 || ||||||| |||||||||| |||||| CAGCAAGCTC TTGATATGTT CTCTGA 542 hqPGS_C08HBa0336I24.1-_SGN-E312208+ (115764 115673,115089 114852,114725 114666,113483 113394,112620 112559) ******************************************************************************** EST sequence 348 +strand 511 n (File: SGN-E331229+) 1 TCATCTCCGC CAGCAGAAGC TCCAATGGGT ACCGCCTACC CCAGAGACGA AAATTATCTG 61 GAAATTGTTG TTCCTAGACG TATTGCACTC TTCGTATCTA TTCAAAACCA GCAACGCCTT 121 CAGCGCCTTT CACTCTCCCC TGATCCTATC AAGATTGAAT TACCGAATGG AACTGTGAAG 181 GAGGGGAAGA AATGGAATAC AACGCCTTTG GATATAGCAA AGGAGATATC GAAGAGCTTG 241 GGCTCCAATG CTTTGATAGC AAAGGTGAAT GGGGTGCTTT GGGATTTGTT GAGGCCATTG 301 GAGAGTGACT GTAAGCTCGA GCTCTTCACT TTTGACAGTG ACGAGGGTCG CGACACGTTT 361 TGGCACTCGA GTGCGCACAT TCTTGGCGAG TCATTGGAGA GGAAATATGG CTGCAAATTG 421 TGTATTGGAC CTTGTACAAC AAGAGGAGAG GGTTTCTATT ATGATGCCTT TTACGGTGAT 481 CTGGGGTTAA ATGAGGATCA TTTTAAAGGG A Predicted gene structure (within gDNA segment 116424 to 112813): Exon 1 115824 115673 ( 152 n); cDNA 1 152 ( 152 n); score: 1.000 Intron 1 115672 115090 ( 583 n); Pd: 1.000 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 115089 114852 ( 238 n); cDNA 153 390 ( 238 n); score: 1.000 Intron 2 114851 114726 ( 126 n); Pd: 0.804 (s: 1.00), Pa: 0.898 (s: 1.00) Exon 3 114725 114666 ( 60 n); cDNA 391 450 ( 60 n); score: 1.000 Intron 3 114665 113484 (1182 n); Pd: 0.867 (s: 1.00), Pa: 0.986 (s: 1.00) Exon 4 113483 113423 ( 61 n); cDNA 451 511 ( 61 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E331229+ 1.000 511 1.000 C PGS_C08HBa0336I24.1-_SGN-E331229+ (115824 115673,115089 114852,114725 114666,113483 113423) Alignment (genomic DNA sequence = upper lines): TCATCTCCGC CAGCAGAAGC TCCAATGGGT ACCGCCTACC CCAGAGACGA AAATTATCTG 115765 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCATCTCCGC CAGCAGAAGC TCCAATGGGT ACCGCCTACC CCAGAGACGA AAATTATCTG 60 GAAATTGTTG TTCCTAGACG TATTGCACTC TTCGTATCTA TTCAAAACCA GCAACGCCTT 115705 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAATTGTTG TTCCTAGACG TATTGCACTC TTCGTATCTA TTCAAAACCA GCAACGCCTT 120 CAGCGCCTTT CACTCTCCCC TGATCCTATC AAGTAAACTC AAATAATTTC TCAAATTGTA 115645 |||||||||| |||||||||| |||||||||| || CAGCGCCTTT CACTCTCCCC TGATCCTATC AA........ .......... .......... 152 TAATCTATTC TATTGTATTA CCACTCTTCA TAAAAATAAT TTACTTCAGT TTGATTGTTC 115585 .......... .......... .......... .......... .......... .......... 152 CGTTGAGTAT TTCTCAGTTA ATTTTTACTG TAAAACGTTG TGATTTTGTA GTATGTTTTG 115525 .......... .......... .......... .......... .......... .......... 152 TATGTGTTAA TGATGTAAAC TTTGTTTAAA AAAGAACAGG AAACCTTGTT GTAACTCACT 115465 .......... .......... .......... .......... .......... .......... 152 CAGAAAAGTA ATTTAAAAGG ATAAATATTT TTGATTACAA CGAAGTGATT TATGGTATTT 115405 .......... .......... .......... .......... .......... .......... 152 ATTTTTAGTT AACTTCTATT TTAAAATTAG TTATAAGTAT GACTTTATTG CTAGTGGCAG 115345 .......... .......... .......... .......... .......... .......... 152 GCTCGCACAA AAATTGGCCT CCAGTATGAC CTTCATATTC TTTTGAAAAA AAAAATAGTT 115285 .......... .......... .......... .......... .......... .......... 152 GTTGTGATTT ATAGTAGGTT TATGCATTTT CTAAATATGC AAATTTTAGT TAAAAAATGT 115225 .......... .......... .......... .......... .......... .......... 152 AAATTATGTT GGTAAATACA TACAAAATTA GTGCTTTGAG CATTGCCATT CCTTTTTGAC 115165 .......... .......... .......... .......... .......... .......... 152 GGAGGGAATA TTTAATTTGG TAATTTTTTT TTTTAGTTAA AATTTTGAAT GTTGGTTATG 115105 .......... .......... .......... .......... .......... .......... 152 ATTGTGTTAA ATTAGGATTG AATTACCGAA TGGAACTGTG AAGGAGGGGA AGAAATGGAA 115045 ||||| |||||||||| |||||||||| |||||||||| |||||||||| .......... .....GATTG AATTACCGAA TGGAACTGTG AAGGAGGGGA AGAAATGGAA 197 TACAACGCCT TTGGATATAG CAAAGGAGAT ATCGAAGAGC TTGGGCTCCA ATGCTTTGAT 114985 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACAACGCCT TTGGATATAG CAAAGGAGAT ATCGAAGAGC TTGGGCTCCA ATGCTTTGAT 257 AGCAAAGGTG AATGGGGTGC TTTGGGATTT GTTGAGGCCA TTGGAGAGTG ACTGTAAGCT 114925 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCAAAGGTG AATGGGGTGC TTTGGGATTT GTTGAGGCCA TTGGAGAGTG ACTGTAAGCT 317 CGAGCTCTTC ACTTTTGACA GTGACGAGGG TCGCGACACG TTTTGGCACT CGAGTGCGCA 114865 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGAGCTCTTC ACTTTTGACA GTGACGAGGG TCGCGACACG TTTTGGCACT CGAGTGCGCA 377 CATTCTTGGC GAGGTTGTAG CCCTTTGTCT ACCACATTGT GGTTGTCTCT TATCAAGTTT 114805 |||||||||| ||| CATTCTTGGC GAG....... .......... .......... .......... .......... 390 TGATTTTTGG AAATTGTTTT TAATAGAATA TTTCTATGCC CTTTATTAAG TTTTGATGTG 114745 .......... .......... .......... .......... .......... .......... 390 TTTTTGGTGG TTTTCTTAGT CATTGGAGAG GAAATATGGC TGCAAATTGT GTATTGGACC 114685 | |||||||||| |||||||||| |||||||||| |||||||||| .......... .........T CATTGGAGAG GAAATATGGC TGCAAATTGT GTATTGGACC 431 TTGTACAACA AGAGGAGAGG TATCACATTT GCCTAATCTT AAATACTGAA GTTTCTTTTT 114625 |||||||||| ||||||||| TTGTACAACA AGAGGAGAG. .......... .......... .......... .......... 450 TAGGGGTCTT TTGGTAGAGT GTATTAGGAA AAACAATGCA TGTATTAGCT GTACTAGTAC 114565 .......... .......... .......... .......... .......... .......... 450 CTTGTTTGAT ACTCTTTTTC AACCTATGTA TAACTTATGC TTATTATACA CTCTATTGCG 114505 .......... .......... .......... .......... .......... .......... 450 TATTAAGGTG TGTATTGCTA ATACCATGAA TTTCTCTGTA TTAGCAATAC AATGGTTTTA 114445 .......... .......... .......... .......... .......... .......... 450 TGCATGCATT AACATGCTAA AAGATCCAAT TGCCCCTCCA AACCTTTTTT ACATTTTTCC 114385 .......... .......... .......... .......... .......... .......... 450 CACCATAATA GTGGAGGGTG TCTTTCTAAA TAATTTTTTT TATGCAATGC ACATCAAACC 114325 .......... .......... .......... .......... .......... .......... 450 AAACAATGCA TTAAAATAAT ATATGTATAA TTAATGGAAG CATAACTAAT ACATGCATTG 114265 .......... .......... .......... .......... .......... .......... 450 CTAATACAAA CATACCAATG CATTCTATTC AACATTATTC TCATACACTC TACCAAACGA 114205 .......... .......... .......... .......... .......... .......... 450 CCCCTTATAG TTTAGAAGTT CTCTGAAATC TGAGACAAAA TTATCTAGTA TTGGAATGAA 114145 .......... .......... .......... .......... .......... .......... 450 GTGGAACCGA ACAGAGCAGG ATGGAGGAGG ATTCATATAG TTGATGACAT TGTGGCATAG 114085 .......... .......... .......... .......... .......... .......... 450 TTGATTGATT AGTTTTGGGG TCTACATCAT GCTATGCTAC CTTTTCTTAT CTTGCATGGC 114025 .......... .......... .......... .......... .......... .......... 450 TGATGGAATT TTGGCAGAAC TATTTTTCTT CTGTATTAAT TGATTAAAGT GAAAATAGCT 113965 .......... .......... .......... .......... .......... .......... 450 AGCAAGCTAA TTATAAGCTT AAGTAGTTTC CAAAAAATAA TTCAACTTTG GTTGGTACTT 113905 .......... .......... .......... .......... .......... .......... 450 GTTGCTTAAC CGCTTTATTT GATAGCTAAT CTCCTGGTAA ATACCTTGGG ACGATTCTAT 113845 .......... .......... .......... .......... .......... .......... 450 GTCCCACCTT TAGTATCCGT AGTTGCTGCA TTAACTTCAG GCATAACCTA TGTTGATTTT 113785 .......... .......... .......... .......... .......... .......... 450 CCGGTTGAAA GAGCAATCCT AAGAAAAAAA AATCCCAAGA AACTATCCTC AGTACTATCA 113725 .......... .......... .......... .......... .......... .......... 450 TTTAGTGTGG CATTTCATCG TTTGAGCCTA ACATATTATT GATGAACTAA CTTCTTAAGA 113665 .......... .......... .......... .......... .......... .......... 450 AATCCATATT CCTTGAAATG AGTTGGGCAA ATTTAGATAA CATTGTTATT CTCAAAAAAA 113605 .......... .......... .......... .......... .......... .......... 450 CTAAATGAGA TAACATTGTT CCACTACTTG CTCCCTCCTC TCTTTCTCTC ATTATAGTTT 113545 .......... .......... .......... .......... .......... .......... 450 ATTCTTTACT TAGTTCATAT TGCTTCCAAT CTGTTATGAC ATGTCAAAAC TGCCTCTGCA 113485 .......... .......... .......... .......... .......... .......... 450 GGGTTTCTAT TATGATGCCT TTTACGGTGA TCTGGGGTTA AATGAGGATC ATTTTAAAGG 113425 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| .GGTTTCTAT TATGATGCCT TTTACGGTGA TCTGGGGTTA AATGAGGATC ATTTTAAAGG 509 GA 113423 || GA 511 hqPGS_C08HBa0336I24.1-_SGN-E331229+ (115824 115673,115089 114852,114725 114666,113483 113423) ******************************************************************************** EST sequence 273 +strand 484 n (File: SGN-E330928+) 1 TAATCATCAG TATAAAACCG CCGTCTTCTG CCGTCGAAGA CTCCTTTAAC TCCGCCGCCG 61 CCGCTTCTTC TCATCTCCGC CAGCAGAAGC TCCAATGGGT ACCGCCTACC CCAGAGACGA 121 AAATTATCTG GAAATTGTTG TTCCTAGACG TATTGCACTC TTCGTATCTA TTCAAAACCA 181 GCAACGCCTT CAGCGCCTTT CACTCTCCCC TGATCCTATC AAGATTGAAT TACCGAATGG 241 AACTGTGAAG GAGGGGAAGA AATGGAATAC CAACGCCTTT GGATATAGCA AAGGAGATAT 301 CGAAGAGCTT GGGCTCCAAT GCTTTGATAG CAAAGGTGAA TGGGGTGCTT TGGGATTTGT 361 TGAGGCCATT GGAGAGTGAC TGTAAGCTCG AGCTCTTCAC TTTTGACAGT GACGAGGGTC 421 GCGACACGTT TTGGCACTCG AGTGCGCACA TTCTTGGCGA GTCATTGGAG AGGAAATATG 481 GCTG Predicted gene structure (within gDNA segment 116493 to 114012): Exon 1 115893 115673 ( 221 n); cDNA 1 222 ( 222 n); score: 0.989 Intron 1 115672 115090 ( 583 n); Pd: 1.000 (s: 1.00), Pa: 1.000 (s: 0.95) Exon 2 115089 114852 ( 238 n); cDNA 223 461 ( 239 n); score: 0.989 Intron 2 114851 114726 ( 126 n); Pd: 0.804 (s: 1.00), Pa: 0.898 (s: 0) Exon 3 114725 114703 ( 23 n); cDNA 462 484 ( 23 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E330928+ 0.989 482 0.996 C PGS_C08HBa0336I24.1-_SGN-E330928+ (115893 115673,115089 114852,114725 114703) Alignment (genomic DNA sequence = upper lines): TAATCATCAG TATAAAACCG CCGTCTTCTG CCGTCGAA-A CTCCTTTAAC TCCGCCGCCG 115835 |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| TAATCATCAG TATAAAACCG CCGTCTTCTG CCGTCGAAGA CTCCTTTAAC TCCGCCGCCG 60 CCGCTTCTTC TCATCTCCGC CAGCAGAAGC TCCAATGGGT ACCGCCTACC CCAGAGACGA 115775 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGCTTCTTC TCATCTCCGC CAGCAGAAGC TCCAATGGGT ACCGCCTACC CCAGAGACGA 120 AAATTATCTG GAAATTGTTG TTCCTAGACG TATTGCACTC TTCGTATCTA TTCAAAACCA 115715 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATTATCTG GAAATTGTTG TTCCTAGACG TATTGCACTC TTCGTATCTA TTCAAAACCA 180 GCAACGCCTT CAGCGCCTTT CACTCTCCCC TGATCCTATC AAGTAAACTC AAATAATTTC 115655 |||||||||| |||||||||| |||||||||| |||||||||| || GCAACGCCTT CAGCGCCTTT CACTCTCCCC TGATCCTATC AA........ .......... 222 TCAAATTGTA TAATCTATTC TATTGTATTA CCACTCTTCA TAAAAATAAT TTACTTCAGT 115595 .......... .......... .......... .......... .......... .......... 222 TTGATTGTTC CGTTGAGTAT TTCTCAGTTA ATTTTTACTG TAAAACGTTG TGATTTTGTA 115535 .......... .......... .......... .......... .......... .......... 222 GTATGTTTTG TATGTGTTAA TGATGTAAAC TTTGTTTAAA AAAGAACAGG AAACCTTGTT 115475 .......... .......... .......... .......... .......... .......... 222 GTAACTCACT CAGAAAAGTA ATTTAAAAGG ATAAATATTT TTGATTACAA CGAAGTGATT 115415 .......... .......... .......... .......... .......... .......... 222 TATGGTATTT ATTTTTAGTT AACTTCTATT TTAAAATTAG TTATAAGTAT GACTTTATTG 115355 .......... .......... .......... .......... .......... .......... 222 CTAGTGGCAG GCTCGCACAA AAATTGGCCT CCAGTATGAC CTTCATATTC TTTTGAAAAA 115295 .......... .......... .......... .......... .......... .......... 222 AAAAATAGTT GTTGTGATTT ATAGTAGGTT TATGCATTTT CTAAATATGC AAATTTTAGT 115235 .......... .......... .......... .......... .......... .......... 222 TAAAAAATGT AAATTATGTT GGTAAATACA TACAAAATTA GTGCTTTGAG CATTGCCATT 115175 .......... .......... .......... .......... .......... .......... 222 CCTTTTTGAC GGAGGGAATA TTTAATTTGG TAATTTTTTT TTTTAGTTAA AATTTTGAAT 115115 .......... .......... .......... .......... .......... .......... 222 GTTGGTTATG ATTGTGTTAA ATTAGGATTG AATTACCGAA TGGAACTGTG AAGGAGGGGA 115055 ||||| |||||||||| |||||||||| |||||||||| .......... .......... .....GATTG AATTACCGAA TGGAACTGTG AAGGAGGGGA 257 AGAAATGGAA TA-CAACGCC TTTGGATATA GCAAAGGAGA TATCGAAGAG CTTGGGCTCC 114996 |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAATGGAA TACCAACGCC TTTGGATATA GCAAAGGAGA TATCGAAGAG CTTGGGCTCC 317 AATGCTTTGA TAGCAAAGGT GAATGGGGTG CTTTGGGATT TGTTGAGGCC ATTGGAGAGT 114936 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGCTTTGA TAGCAAAGGT GAATGGGGTG CTTTGGGATT TGTTGAGGCC ATTGGAGAGT 377 GACTGTAAGC TCGAGCTCTT CACTTTTGAC AGTGACGAGG GTCGCGACAC GTTTTGGCAC 114876 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACTGTAAGC TCGAGCTCTT CACTTTTGAC AGTGACGAGG GTCGCGACAC GTTTTGGCAC 437 TCGAGTGCGC ACATTCTTGG CGAGGTTGTA GCCCTTTGTC TACCACATTG TGGTTGTCTC 114816 |||||||||| |||||||||| |||| TCGAGTGCGC ACATTCTTGG CGAG...... .......... .......... .......... 461 TTATCAAGTT TTGATTTTTG GAAATTGTTT TTAATAGAAT ATTTCTATGC CCTTTATTAA 114756 .......... .......... .......... .......... .......... .......... 461 GTTTTGATGT GTTTTTGGTG GTTTTCTTAG TCATTGGAGA GGAAATATGG CTG 114703 |||||||||| |||||||||| ||| .......... .......... .......... TCATTGGAGA GGAAATATGG CTG 484 hqPGS_C08HBa0336I24.1-_SGN-E330928+ (115893 115673,115089 114852,114725 114703) ******************************************************************************** EST sequence 173 +strand 477 n (File: SGN-E301951+) 1 TGGCTCCCGT AATCATCAGT ATAAAACCGC CGTCTTCTGC CGTCGAAACT CCTTTAACTC 61 CGCCGCCGCC GCTTCTTCTC ATCTCCGCCA GCAGAAGCTC CAATGGGTAC CGCCTACCCC 121 AGAGACGAAA ATTATCTGGA AATTGTTGTT CCTAGACGTA TTGCACTCTT CGTATCTATT 181 CAAAACCAGC AACGCCTTCA GCGCCTTTCA CTCTCCCCTG ATCCTATCAA GATTGAATTA 241 CCGAATGGAA CTGTGAAGGA GGGGAAGAAA TGGAATACAA CGCCTTTGGA TATAGCAAAG 301 GAGATATCGA AGAGCTTGGG CTCCAATGCT TTGATAGCAA AGGTGAATGG GGTGCTTTGG 361 GATTTGTTGA GGCCATTGGA GAGTGACTGT AAGCTCGAGC TCTTCACTTT TGACAGTGAC 421 GAGGGTCGCG ACACGTTTTG GCACTCGAGT GCGCACATTC TTGGCGAGTC ATTGGAG Predicted gene structure (within gDNA segment 116502 to 114152): Exon 1 115902 115673 ( 230 n); cDNA 1 230 ( 230 n); score: 1.000 Intron 1 115672 115090 ( 583 n); Pd: 1.000 (s: 1.00), Pa: 1.000 (s: 1.00) Exon 2 115089 114852 ( 238 n); cDNA 231 468 ( 238 n); score: 1.000 Intron 2 114851 114726 ( 126 n); Pd: 0.804 (s: 1.00), Pa: 0.898 (s: 0) Exon 3 114725 114717 ( 9 n); cDNA 469 477 ( 9 n); score: 1.000 MATCH C08HBa0336I24.1- SGN-E301951+ 1.000 477 1.000 C PGS_C08HBa0336I24.1-_SGN-E301951+ (115902 115673,115089 114852,114725 114717) Alignment (genomic DNA sequence = upper lines): TGGCTCCCGT AATCATCAGT ATAAAACCGC CGTCTTCTGC CGTCGAAACT CCTTTAACTC 115843 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGCTCCCGT AATCATCAGT ATAAAACCGC CGTCTTCTGC CGTCGAAACT CCTTTAACTC 60 CGCCGCCGCC GCTTCTTCTC ATCTCCGCCA GCAGAAGCTC CAATGGGTAC CGCCTACCCC 115783 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCCGCCGCC GCTTCTTCTC ATCTCCGCCA GCAGAAGCTC CAATGGGTAC CGCCTACCCC 120 AGAGACGAAA ATTATCTGGA AATTGTTGTT CCTAGACGTA TTGCACTCTT CGTATCTATT 115723 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAGACGAAA ATTATCTGGA AATTGTTGTT CCTAGACGTA TTGCACTCTT CGTATCTATT 180 CAAAACCAGC AACGCCTTCA GCGCCTTTCA CTCTCCCCTG ATCCTATCAA GTAAACTCAA 115663 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAACCAGC AACGCCTTCA GCGCCTTTCA CTCTCCCCTG ATCCTATCAA .......... 230 ATAATTTCTC AAATTGTATA ATCTATTCTA TTGTATTACC ACTCTTCATA AAAATAATTT 115603 .......... .......... .......... .......... .......... .......... 230 ACTTCAGTTT GATTGTTCCG TTGAGTATTT CTCAGTTAAT TTTTACTGTA AAACGTTGTG 115543 .......... .......... .......... .......... .......... .......... 230 ATTTTGTAGT ATGTTTTGTA TGTGTTAATG ATGTAAACTT TGTTTAAAAA AGAACAGGAA 115483 .......... .......... .......... .......... .......... .......... 230 ACCTTGTTGT AACTCACTCA GAAAAGTAAT TTAAAAGGAT AAATATTTTT GATTACAACG 115423 .......... .......... .......... .......... .......... .......... 230 AAGTGATTTA TGGTATTTAT TTTTAGTTAA CTTCTATTTT AAAATTAGTT ATAAGTATGA 115363 .......... .......... .......... .......... .......... .......... 230 CTTTATTGCT AGTGGCAGGC TCGCACAAAA ATTGGCCTCC AGTATGACCT TCATATTCTT 115303 .......... .......... .......... .......... .......... .......... 230 TTGAAAAAAA AAATAGTTGT TGTGATTTAT AGTAGGTTTA TGCATTTTCT AAATATGCAA 115243 .......... .......... .......... .......... .......... .......... 230 ATTTTAGTTA AAAAATGTAA ATTATGTTGG TAAATACATA CAAAATTAGT GCTTTGAGCA 115183 .......... .......... .......... .......... .......... .......... 230 TTGCCATTCC TTTTTGACGG AGGGAATATT TAATTTGGTA ATTTTTTTTT TTAGTTAAAA 115123 .......... .......... .......... .......... .......... .......... 230 TTTTGAATGT TGGTTATGAT TGTGTTAAAT TAGGATTGAA TTACCGAATG GAACTGTGAA 115063 ||||||| |||||||||| |||||||||| .......... .......... .......... ...GATTGAA TTACCGAATG GAACTGTGAA 257 GGAGGGGAAG AAATGGAATA CAACGCCTTT GGATATAGCA AAGGAGATAT CGAAGAGCTT 115003 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAGGGGAAG AAATGGAATA CAACGCCTTT GGATATAGCA AAGGAGATAT CGAAGAGCTT 317 GGGCTCCAAT GCTTTGATAG CAAAGGTGAA TGGGGTGCTT TGGGATTTGT TGAGGCCATT 114943 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGCTCCAAT GCTTTGATAG CAAAGGTGAA TGGGGTGCTT TGGGATTTGT TGAGGCCATT 377 GGAGAGTGAC TGTAAGCTCG AGCTCTTCAC TTTTGACAGT GACGAGGGTC GCGACACGTT 114883 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAGAGTGAC TGTAAGCTCG AGCTCTTCAC TTTTGACAGT GACGAGGGTC GCGACACGTT 437 TTGGCACTCG AGTGCGCACA TTCTTGGCGA GGTTGTAGCC CTTTGTCTAC CACATTGTGG 114823 |||||||||| |||||||||| |||||||||| | TTGGCACTCG AGTGCGCACA TTCTTGGCGA G......... .......... .......... 468 TTGTCTCTTA TCAAGTTTTG ATTTTTGGAA ATTGTTTTTA ATAGAATATT TCTATGCCCT 114763 .......... .......... .......... .......... .......... .......... 468 TTATTAAGTT TTGATGTGTT TTTGGTGGTT TTCTTAGTCA TTGGAG 114717 ||| |||||| .......... .......... .......... .......TCA TTGGAG 477 hqPGS_C08HBa0336I24.1-_SGN-E301951+ (115902 115673,115089 114852,114725 114717) ******************************************************************************** EST sequence 58 +strand 736 n (File: SGN-E547025+) 1 TTTTTTTTTT TTGTATAACT AAGTCCAATT ACTTTTTGTA TATATATACA AAAACAAAAA 61 TAATAATGAG CCTTTAATAT ACAATGCTGC TACTACCACT ATTAAGACTT AGTATATTAT 121 TCATTATACA TAACTTAAAG TATGTATAAA GTAATCAAAT CCTCAGACAC ATATACAAAT 181 ATATAACTAA AACTTGTGTG TACTAAACAT GCAATATACT ATATACAATT ACGTGAATAC 241 AAAATTTACT TAAACAATAA TTTTTTGTAT ATTGACATCT AAGTAACAAA AAAATTGTAT 301 CTAAATTTGT GTTTTAAGCC ACTACCTCAT AATTATGATG TTCTTCAGAT CCGTCAACTT 361 CACATGCATT TTCCTCTGAA TCAATGTTGC TTTCCTCTTT CTTCCTCCTT GTACAATTTT 421 AATGCCTCTA GATTTAGCAT TGTTAATAAC TTCTTGAACT GCCGTAGGGT CATATTTTTT 481 TCTTTGATCT CAATTCTTCC ATTGTTTGTT CATGTTGAAC TTGTTTTGAT TTTACCATAG 541 ACCCTGTGAT AATCCTCATA GATGAAGATG ATTCATTCAT TCTGTGACTA ATTTGAGATC 601 TAATAAGAAC AAACAATCGA TTATTTCATC AAAAAAATAT GAAAAAACAT AAGAAACACA 661 ATACATATAC AATTGTTGAA ATAGGAAAAA AAAAGGAAAA CAACTAAAAT TTAGGACGAA 721 AATTTGATTC ACTTTG Predicted gene structure (within gDNA segment 124566 to 130973): Exon 1 125150 125259 ( 110 n); cDNA 2 113 ( 112 n); score: 0.718 Intron 1 125260 125597 ( 338 n); Pd: 0.836 (s: 0.77), Pa: 0.000 (s: 0.62) Exon 2 125598 125689 ( 92 n); cDNA 114 203 ( 90 n); score: 0.576 Intron 2 125690 125931 ( 242 n); Pd: 0.000 (s: 0.52), Pa: 0.000 (s: 0.76) Exon 3 125932 126285 ( 354 n); cDNA 204 543 ( 340 n); score: 0.835 Intron 3 126286 126366 ( 81 n); Pd: 0.000 (s: 0.86), Pa: 0.000 (s: 0.88) Exon 4 126367 126487 ( 121 n); cDNA 544 666 ( 123 n); score: 0.843 MATCH C08HBa0336I24.1+ SGN-E547025+ 0.782 677 0.920 C PGS_C08HBa0336I24.1+_SGN-E547025+ (125150 125259,125598 125689,125932 126285,126367 126487) Alignment (genomic DNA sequence = upper lines): TTTTCCCATC TATATAACTA AATTCAATTA CTTTGTGTAT ATATTTATAT AAA-AAAAAT 125208 |||| | | |||||||| | | |||||| |||| ||||| |||| || | ||| |||||| TTTTTTTTTT TGTATAACTA AGTCCAATTA CTTTTTGTAT ATATATACAA AAACAAAAAT 61 --TAATGAGT CTTTAATATA CAAT-CCCCT ACTACCAGCT ATTAAAACAG ACATGTACAT 125265 ||||||| |||||||||| |||| | || ||||||| || ||||| || | | AATAATGAGC CTTTAATATA CAATGCTGCT ACTACCA-CT ATTAAGACTT A-GT...... 113 ATCATTTTTT GTATATGTAT ATAAACTTAA TATATACTAA CTTCAATAGT TGTATATAAC 125325 .......... .......... .......... .......... .......... .......... 113 TAATATAATA TACAAATTCT AATCATATAT TCAAATTTTC CATCTGTATA ACTAAGTCCA 125385 .......... .......... .......... .......... .......... .......... 113 ATTACTTTTT TGTATATATA TACAAAAAAA ACAAAAATAA GTTATATTGA TATGTGTACA 125445 .......... .......... .......... .......... .......... .......... 113 TGAATATATT AGTTAAACAT GACATTATAT TCAATAATTT ATATATAACT ACTACAATAT 125505 .......... .......... .......... .......... .......... .......... 113 ACAATTTATA ATCACATATG ATATTTTCCC ATCTATATAA CTAAATCCAA CTACAATATG 125565 .......... .......... .......... .......... .......... .......... 113 TGTACATGAA TATATTAGTT AAACATGACA TTATATTCAA TAATTTGTAA ATAACTACTA 125625 ||||| | | | || || |||||| | .......... .......... .......... ..ATATT-AT TCA-TTATAC ATAACTTAAA 139 CAATATACAA AATTATAATC ACATATGATA TTTTCCCATC TATATAACTA AATCCAATTA 125685 || || || | | || | | | || | | || |||||||||| || | | GTATGTATAA AGTAATCAAA TCCTCAGACA CATATACAAA TATATAACTA AAACTTGTGT 199 CTTTGTGAAT ATATTTATAT AAAAAAAATA ATGAGTCTTT AATATACAAT CCCCTACTAC 125745 | GTAC...... .......... .......... .......... .......... .......... 203 CAGCTATTGA AATAGACATG TACATATCAA TTTTTGTATA TGTATATAAA CTTAATATAT 125805 .......... .......... .......... .......... .......... .......... 203 ACTAACTTCA ATAATTTGTA TATAACTAAT AGAATATACA AATTCTAATT ATATATTCAA 125865 .......... .......... .......... .......... .......... .......... 203 ATTTTCCATC TGTATAACTA AGTCCAATTA CTATTTTGTA TATATATACA AAAACCAAAA 125925 .......... .......... .......... .......... .......... .......... 203 ATAACATAAA CATGCAATAT ACTATATACA ATTACTAAAC ATGGAATATA CTATATACAA 125985 |||| |||||||||| |||||||||| ||||| | | | ||| | | | | ......TAAA CATGCAATAT ACTATATACA ATTACG---- -T-G-A-ATA C-A-A-AATT 246 TACTTAATTT AATATTTTTT GTATATTGAC AACTAATTAA CCAAAAAATT GTATCTAACT 126045 ||||||| | ||||||| |||||||||| | |||| ||| | |||||||| |||||||| | TACTTAAACA ATAATTTTTT GTATATTGAC ATCTAAGTAA CAAAAAAATT GTATCTAAAT 306 TTGTGTTTTA AGACACTACC TCGTGATTAT GAAGTTCTTC AGATCCGACA ACTTCAGAAG 126105 |||||||||| || ||||||| || | ||||| || ||||||| ||||||| || |||||| | | TTGTGTTTTA AGCCACTACC TCATAATTAT GATGTTCTTC AGATCCGTCA ACTTCACATG 366 CATTTTCCTC TGATTCAATG TTTACATCTT TCCTCTTTCT TGTTCCTTGT ACAATTTTAA 126165 |||||||||| ||| |||||| || ||| |||||||||| | ||||||| |||||||||| CATTTTCCTC TGAATCAATG -TT---GCTT TCCTCTTTCT TCCTCCTTGT ACAATTTTAA 422 TGCCTCTAGC TTTGACATTT TTAATAAGTT GTTGAACTGC CATAGGGTCG T-TTTTTTCC 126224 ||||||||| ||| |||| ||||||| || ||||||||| | ||||||| | |||||| | TGCCTCTAGA TTTAGCATTG TTAATAACTT CTTGAACTGC CGTAGGGTCA TATTTTTTTC 482 TTTGATCTCA GCTCTTCCAT GGTTTGTTCT TGTATAACTT GTTTTGATTT TCCCAAAGAC 126284 |||||||||| |||||||| |||||||| ||| ||||| |||||||||| | ||| |||| TTTGATCTCA ATTCTTCCAT TGTTTGTTCA TGTTGAACTT GTTTTGATTT TACCATAGAC 542 CCTACATTAA CTCCAAAATC TTGAGTTAAC CTCATTGAAA AGGATGGTAA AATGTCAACA 126344 | C......... .......... .......... .......... .......... .......... 543 ACATTGACAT GCAAAGGACT ACCTCTGGTA ATCCTCAAAG ATGAAGATGA TTCATTCATT 126404 || || || ||||||| || |||||||||| |||||||||| .......... .......... ..CTGTGATA ATCCTCATAG ATGAAGATGA TTCATTCATT 581 GTTTGACCAA TTTTAGATCT ATCAAGAACA AAAAATCGAT TATTTCATC- AAAATATATG 126463 | |||| || ||| |||||| | ||||||| || ||||||| ||||||||| |||| ||||| CTGTGACTAA TTTGAGATCT AATAAGAACA AACAATCGAT TATTTCATCA AAAAAATATG 641 AAAAAA-ATA ATAAACAGAA CACAT 126487 |||||| ||| | ||||| || |||| AAAAAACATA AGAAACACAA TACAT 666 hqPGS_C08HBa0336I24.1+_SGN-E547025+ (125150 125259,125598 125689,125932 126285,126367 126487) ******************************************************************************** EST sequence 17 +strand 674 n (File: SGN-E371940+) 1 GACAGTATCC TTTGTTTTTT GTTACCATGC TTCACAATAT ATACTGGCTT TGACCTCTTA 61 ACAGGGAAAA AGAGCTAGTT AGGCTTTTCG TTTGCTGGCA TTTATTTTTA GCCTGTATGC 121 ATATTTTGTG CCTCCAATGC TGTAAAAACT TGCTAAGAAA AATTGAACTA GCCCAGTGCA 181 ACCTATTCTT TCTGCTTGTA GTTTTGTGTT CTTGCTTTTA GTCATGTTGG TGAGTTGATG 241 CTAACTTTAA CTAAAAATAA GCTGGTTCAA CTCAAGCAAC AAGATTGACA GCAGCTAGGC 301 AGATTGGTGA AATAGCCAAA TCACATCCTC AGGACCTAAA CTCTTTGTTG AGTAAGGTAT 361 GTCTTTCTGT GCAGTTCTTC TCTAGTTATA TCAAAGTTCG CATTTTTTTT TCTCTGTGTT 421 GCGGCTATAC ACTGGTTATG TGTGTTGGAG TGGGAAGTGG TAACATTTAT CAATTTGAAG 481 ATAGAAGTTT CGAAAAAGAA AATCCTTATT TTTCCTGAGT TATGTGCATT AAATCTATGA 541 AAGTTTTACC TTTGAAATTT TTTCTGCAAG TGTGAGAACT AATTTCAGCA AATTTGTTTT 601 TTTAAGGAAG TAATTCTACA GAACATTTCA TAGTGATAGG AGTGGTTTAT TAAATGAGTA 661 CTTTGCTGGT CAAA Predicted gene structure (within gDNA segment 130637 to 132520): Exon 1 131237 131910 ( 674 n); cDNA 1 674 ( 674 n); score: 0.999 MATCH C08HBa0336I24.1+ SGN-E371940+ 0.999 674 1.000 C PGS_C08HBa0336I24.1+_SGN-E371940+ (131237 131910) Alignment (genomic DNA sequence = upper lines): GACAGTATCC TTTGTTTTTT GTTACCATGC TTCACAATAT ATACTGGCTT TGACCTCTTA 131296 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACAGTATCC TTTGTTTTTT GTTACCATGC TTCACAATAT ATACTGGCTT TGACCTCTTA 60 ACAGGGAAAA AGAGCTAGTT AGGCTTTTCG TTTGCTGGCA TTTATTTTTA GCCTGTATGC 131356 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAGGGAAAA AGAGCTAGTT AGGCTTTTCG TTTGCTGGCA TTTATTTTTA GCCTGTATGC 120 ATATTTTGTG CCTCCAATGC TGTAAAAACT TGCTAAGAAA AATTGAACTA GCCCAGTGCA 131416 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATTTTGTG CCTCCAATGC TGTAAAAACT TGCTAAGAAA AATTGAACTA GCCCAGTGCA 180 ACCTATTCTT TCTGCTTGTA GTTTTGTGTT CTTGCTTTTA GTCATGTTGG TGAGTTGATG 131476 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTATTCTT TCTGCTTGTA GTTTTGTGTT CTTGCTTTTA GTCATGTTGG TGAGTTGATG 240 CTAACTTTAA CTAAAAATAA GCTGGTTCAA CTCAAGCAAC AAGATTGACA GCAGCTAGGC 131536 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAACTTTAA CTAAAAATAA GCTGGTTCAA CTCAAGCAAC AAGATTGACA GCAGCTAGGC 300 AGATTGGTGA AATAGCCAAA TCACATCCTC AGGACCTAAA CTCTTTGTTG AGTAAGGTAT 131596 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATTGGTGA AATAGCCAAA TCACATCCTC AGGACCTAAA CTCTTTGTTG AGTAAGGTAT 360 GTCTTTCTGT GCAGTTCTTC TCTAGTTATA TCAAAGTTCG CATTTTTTTT TCTCTGTGTT 131656 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCTTTCTGT GCAGTTCTTC TCTAGTTATA TCAAAGTTCG CATTTTTTTT TCTCTGTGTT 420 GCGGCTATAC ACTGGTTATG TGTGTTGGAG TGGGAAGTGG TAACATTTAT CAATTTGAAG 131716 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGGCTATAC ACTGGTTATG TGTGTTGGAG TGGGAAGTGG TAACATTTAT CAATTTGAAG 480 ATAGAAGTTT CGAAAAAGAA AATCCTTATT TTTCCTGAGT TATGTGCATT AAATCTATGA 131776 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGAAGTTT CGAAAAAGAA AATCCTTATT TTTCCTGAGT TATGTGCATT AAATCTATGA 540 AAGTTTTACC TTTGAAATTT TTTCTGCAAG TGTGAGAACT AATTTCAGCA AATTTGTTTT 131836 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTTTTACC TTTGAAATTT TTTCTGCAAG TGTGAGAACT AATTTCAGCA AATTTGTTTT 600 TTTAAGGAAG TAATTCTACA GAACATTTCA TAGTGATAGG AGTGGTTAAT TAAATGAGTA 131896 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| TTTAAGGAAG TAATTCTACA GAACATTTCA TAGTGATAGG AGTGGTTTAT TAAATGAGTA 660 CTTTGCTGGT CAAA 131910 |||||||||| |||| CTTTGCTGGT CAAA 674 hqPGS_C08HBa0336I24.1+_SGN-E371940+ (131237 131910) ******************************************************************************** EST sequence 48 +strand 595 n (File: SGN-E287227+) 1 GACAGTATCC TTTGTTTTTT GTTACCATGC TTCACAATAT ATACTGGCTT TGACCTCTTA 61 ACAGGGAAAA AGAGCTAGTT AGGCTTTTCG TTTGCTGGCA TTTATTTTTA GCCTGTATGC 121 ATATTTTGTG CCTCCAATGC TGTAAAAACT TGCTAAGAAA AATTGAACTA GCCCAGTGCA 181 ACCTATTCTT TCTGCTTGTA GTTTTGTGTT CTTGCTTTTA GTCATGTTGG TGAGTTGATG 241 CTAACTTTAA CTAAAAATAA GCTGGTTCAA CTCAAGCAAC AAGATTGACA GCAGCTAGGC 301 AGATTGGTGA AATAGCCAAA TCACATCCTC AGGACCTAAA CTCTTTGTTG AGTAAGGTAT 361 GTCTTTCTGT GCAGATCTTC TCTAGTTATA TCAAAGTTCG CATTTTTTTT TCTCTGTGTT 421 GCGGCTATAC ACTGGTTATG TGTGTTGGAG TGGGAAGTGG TAACATTTAT CAATTTGAAG 481 ATAGAAGTTT CGAAAAAGAA AATCCTTATT TTTCCTGAGT TATGTGCATT AAATCTATGA 541 AAGTTTTACC TTTGAAATTT TTTCTGCAAG TGTGAGAACT AATTTCAGCA AATTT Predicted gene structure (within gDNA segment 130637 to 132441): Exon 1 131237 131831 ( 595 n); cDNA 1 595 ( 595 n); score: 0.998 MATCH C08HBa0336I24.1+ SGN-E287227+ 0.998 595 1.000 C PGS_C08HBa0336I24.1+_SGN-E287227+ (131237 131831) Alignment (genomic DNA sequence = upper lines): GACAGTATCC TTTGTTTTTT GTTACCATGC TTCACAATAT ATACTGGCTT TGACCTCTTA 131296 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACAGTATCC TTTGTTTTTT GTTACCATGC TTCACAATAT ATACTGGCTT TGACCTCTTA 60 ACAGGGAAAA AGAGCTAGTT AGGCTTTTCG TTTGCTGGCA TTTATTTTTA GCCTGTATGC 131356 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAGGGAAAA AGAGCTAGTT AGGCTTTTCG TTTGCTGGCA TTTATTTTTA GCCTGTATGC 120 ATATTTTGTG CCTCCAATGC TGTAAAAACT TGCTAAGAAA AATTGAACTA GCCCAGTGCA 131416 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATTTTGTG CCTCCAATGC TGTAAAAACT TGCTAAGAAA AATTGAACTA GCCCAGTGCA 180 ACCTATTCTT TCTGCTTGTA GTTTTGTGTT CTTGCTTTTA GTCATGTTGG TGAGTTGATG 131476 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTATTCTT TCTGCTTGTA GTTTTGTGTT CTTGCTTTTA GTCATGTTGG TGAGTTGATG 240 CTAACTTTAA CTAAAAATAA GCTGGTTCAA CTCAAGCAAC AAGATTGACA GCAGCTAGGC 131536 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAACTTTAA CTAAAAATAA GCTGGTTCAA CTCAAGCAAC AAGATTGACA GCAGCTAGGC 300 AGATTGGTGA AATAGCCAAA TCACATCCTC AGGACCTAAA CTCTTTGTTG AGTAAGGTAT 131596 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATTGGTGA AATAGCCAAA TCACATCCTC AGGACCTAAA CTCTTTGTTG AGTAAGGTAT 360 GTCTTTCTGT GCAGTTCTTC TCTAGTTATA TCAAAGTTCG CATTTTTTTT TCTCTGTGTT 131656 |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCTTTCTGT GCAGATCTTC TCTAGTTATA TCAAAGTTCG CATTTTTTTT TCTCTGTGTT 420 GCGGCTATAC ACTGGTTATG TGTGTTGGAG TGGGAAGTGG TAACATTTAT CAATTTGAAG 131716 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGGCTATAC ACTGGTTATG TGTGTTGGAG TGGGAAGTGG TAACATTTAT CAATTTGAAG 480 ATAGAAGTTT CGAAAAAGAA AATCCTTATT TTTCCTGAGT TATGTGCATT AAATCTATGA 131776 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGAAGTTT CGAAAAAGAA AATCCTTATT TTTCCTGAGT TATGTGCATT AAATCTATGA 540 AAGTTTTACC TTTGAAATTT TTTCTGCAAG TGTGAGAACT AATTTCAGCA AATTT 131831 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| AAGTTTTACC TTTGAAATTT TTTCTGCAAG TGTGAGAACT AATTTCAGCA AATTT 595 hqPGS_C08HBa0336I24.1+_SGN-E287227+ (131237 131831) ******************************************************************************** EST sequence 145 -strand 706 n (File: SGN-E371939-) 1 TCCTACCCAA ACAATTCTAA CCTTAAAATA TATTAGAAAA CATTAAGAAA GTACCTAGTT 61 AATAATTTCT GCATAATTAA TGTTGACAAT TTTTTTTTGT AAATTTGTTT ACAACGTTGG 121 AAACTTAAAA TTATAGCAAA TTAAACTTGA CCCGAGAGCA ATACTCAATG AAGATAAAAA 181 ACAAGACAAA CCCTAAAACC ATTAATAGAT GCTTTAATGG TCGGTCATGT AATAGAAATG 241 ATATTTCTCT TCTTTTTTCC TCTTGCCTCC TTTATCAAAT TCTATTCTGC TTGAGCTTAC 301 TGCTCAGTTC TTTCAAAAGG ATGGCAACAC AGTAGGAACT ATGGATAGCT GGATAAAATT 361 TGGAAATATC TAAGAAATTA TTTTCCAAGA AAGCAGTGGA GGGTTTGCGA GATGGTTATT 421 GCTTAAAAGT GGGTTGTTGG GTTGCTCATT CTTCAGTAGA ACAACTGTTA AAAAAAACAA 481 TTGCAATAAT AGAATAGGAG GAAGAAGACT GAGAGAGAAG AGTGTAGGGA AGCCGGAGAA 541 GTGTAGACAA AATGAAAAAA TAGAATATTA ATAGGAGAGG GAGGGAATTG AAGATTGCAA 601 GAGAGAGGAG GAATAACCGT ATTGGCAAAT GATCCACGAA ACAATCAACT TACAACTTTT 661 TAATTCCTTT ATTAAACCAC CTTTTTAAGT CCTTTATAAA AAAAAA Predicted gene structure (within gDNA segment 132029 to 133989): Exon 1 132639 133344 ( 706 n); cDNA 1 706 ( 706 n); score: 0.997 MATCH C08HBa0336I24.1+ SGN-E371939- 0.997 706 1.000 C PGS_C08HBa0336I24.1+_SGN-E371939- (132639 133344) Alignment (genomic DNA sequence = upper lines): TCCTACCCAA ACAATTCTAA CCTTAAAATA TATTAGAAAA CATTAAGAAA GTACCTAGTT 132698 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTACCCAA ACAATTCTAA CCTTAAAATA TATTAGAAAA CATTAAGAAA GTACCTAGTT 60 AATAATTTCT GCATAATTAA TGTTGACAAT TTTTTTTTGT AAATTTGTTT ACAACGTTGG 132758 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATAATTTCT GCATAATTAA TGTTGACAAT TTTTTTTTGT AAATTTGTTT ACAACGTTGG 120 AAACTTAAAA TTATAGCAAA TTAAACTTGA CCCGAGAGCA ATACTCAATG AAGATAAAAA 132818 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACTTAAAA TTATAGCAAA TTAAACTTGA CCCGAGAGCA ATACTCAATG AAGATAAAAA 180 ACAAGACAAA CCCTAAAACC ATTAATAGAT GCTTTAATGG TCGGTCATGT AATAGAAATG 132878 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAGACAAA CCCTAAAACC ATTAATAGAT GCTTTAATGG TCGGTCATGT AATAGAAATG 240 ATATTTCTCT TCTTTTTTCC TCTTGCCTCC TTTATCAAAT TCTATTCTGC TTGAGCTTAC 132938 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATTTCTCT TCTTTTTTCC TCTTGCCTCC TTTATCAAAT TCTATTCTGC TTGAGCTTAC 300 TGCTCAGTTC TTTCAAAAGG ATGGCAACAC AGTAGGAACT ATGGATAGCT GGATAAAATT 132998 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCTCAGTTC TTTCAAAAGG ATGGCAACAC AGTAGGAACT ATGGATAGCT GGATAAAATT 360 TGGAAATATC TAAGAAATTA TTTTCCAAGA AAGCAGTGGA GGGTTTGCGA GATGGTTATT 133058 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGAAATATC TAAGAAATTA TTTTCCAAGA AAGCAGTGGA GGGTTTGCGA GATGGTTATT 420 GCTTAAAAGT GGGTTGTTGG GTTGCTCATT CTTCAGTAGA ACAACTGTTA AAAAAAACAA 133118 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTTAAAAGT GGGTTGTTGG GTTGCTCATT CTTCAGTAGA ACAACTGTTA AAAAAAACAA 480 TTGCAATAAT AGAATAGGAG GAAGAAGACT GAGAGAGAAG AGTGTAGGGA AGCCGGAGAA 133178 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCAATAAT AGAATAGGAG GAAGAAGACT GAGAGAGAAG AGTGTAGGGA AGCCGGAGAA 540 GTGTAGACAA AATGAAAAAA TAGAATATTA ATAGGAGAGG GAGGGAATTG AAGATTGCAA 133238 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGTAGACAA AATGAAAAAA TAGAATATTA ATAGGAGAGG GAGGGAATTG AAGATTGCAA 600 GAGAGAGGAG GAATAACCGT ATTGGCAAAT GATCCACGAA ACAATCAACT TACAACTTTT 133298 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGAGAGGAG GAATAACCGT ATTGGCAAAT GATCCACGAA ACAATCAACT TACAACTTTT 660 TAATTCCTTT ATTAAACCAC CTTTTTAAGT CCTTTATAAA ACCAAA 133344 |||||||||| |||||||||| |||||||||| |||||||||| | ||| TAATTCCTTT ATTAAACCAC CTTTTTAAGT CCTTTATAAA AAAAAA 706 hqPGS_C08HBa0336I24.1+_SGN-E371939- (132639 133344) ******************************************************************************** EST sequence 126 -strand 832 n (File: SGN-E538098-) 1 ATGCTTATCA AAGTCGAAAA ATGCAAAAAA AAAAGAAGCT CTAAGGGTCC GTAGAGGCTT 61 TAAGCGCAAA GCGCAAAATA AAGTGTGGGT ATAAAAAAGA CGCAAAGGGA GAAAAGAAAA 121 CAAATGTATA TCTTTAGTCC AAGGCTAATA ATTATAAACA TGAATGACAA ATATATGGCA 181 AAAGAAATTG AAAAAAATTT ACGATGAAGT AATATCAATG ATTTAGCGTC ACTTTGTCAT 241 AAGAAGCTCA TTGGCAAGGA AACGTTTGCC TTAGAACCTT AATGATGACA TTGAAGCACA 301 CATAGAGCAA GGTGAAACAC TCAACACGTT TTGAGCCTCA TTCTAAAGCT TAAGCGCGCT 361 TAATGCACGC CTTTGATAAC ACTGATATGG ACTTACCCTT TGCCTATCTA AGTTTTATAC 421 ATTTAATGTG TTAAAATTGA TTCTTTGCAC AAATTCACTT GTCTTATTAT GATAAAAATT 481 ATTAAATATG ATATGAGTTG CATATTTATT TTCTTTTTAA CATATAATTA TTTCTTTACT 541 TAATTTTAAA TTACTTGAAT ATTTGTGGTT GCTTTTAATT AATCTTTTGC CTAATCAAAA 601 TCTGAACATT TTCTTACATG TTTAATTTTG TTAAAAGCTT TATTCGATTT TGGTGATAAA 661 TTCTTAATGA TCTGACCCTC TTTTTGTTTA AGGATAACAA ATTTTAATAA TTGGCTCCCA 721 TTATTGTTTC TTTCACGGTT ATGCCTTTTC ATTTAGTATA TAAACAGAAG TCCTCATTCA 781 CTTTTCCTCG CGCTTTAATC CACACTACTT TCGTATACTC TCAAAAAAAA AA Predicted gene structure (within gDNA segment 134036 to 142182): Exon 1 135771 135780 ( 10 n); cDNA 1 10 ( 10 n); score: 0.500 Intron 1 135781 135875 ( 95 n); Pd: 0.900 (s: 0), Pa: 0.803 (s: 0.58) Exon 2 135876 136227 ( 352 n); cDNA 11 359 ( 349 n); score: 0.767 Intron 2 136228 137156 ( 929 n); Pd: 0.000 (s: 0.80), Pa: 0.720 (s: 0) Exon 3 137157 137167 ( 11 n); cDNA 360 369 ( 10 n); score: 0.727 Intron 3 137168 137266 ( 99 n); Pd: 0.849 (s: 0), Pa: 0.965 (s: 0) Exon 4 137267 137287 ( 21 n); cDNA 370 389 ( 20 n); score: 0.619 Intron 4 137288 139054 (1767 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.57) Exon 5 139055 139094 ( 40 n); cDNA 390 428 ( 39 n); score: 0.575 Intron 5 139095 139230 ( 136 n); Pd: 0.847 (s: 0.57), Pa: 0.000 (s: 0) Exon 6 139231 139255 ( 25 n); cDNA 429 452 ( 24 n); score: 0.680 Intron 6 139256 140918 (1663 n); Pd: 0.000 (s: 0), Pa: 0.621 (s: 0) Exon 7 140919 140924 ( 6 n); cDNA 453 458 ( 6 n); score: 0.667 Intron 7 140925 141155 ( 231 n); Pd: 0.929 (s: 0), Pa: 0.415 (s: 0) Exon 8 141156 141181 ( 26 n); cDNA 459 485 ( 27 n); score: 0.673 PPA cDNA 823 832 MATCH C08HBa0336I24.1+ SGN-E538098- 0.767 491 0.590 C PGS_C08HBa0336I24.1+_SGN-E538098- (135771 135780,135876 136227,137157 137167,137267 137287,139055 139094,139231 139255,140919 140924,141156 141181) Alignment (genomic DNA sequence = upper lines): ATGCAAGAAA GTAACCTTTT CCATTGTTTG CCTCGTTCGT GTTTTAGAAA CTTTTTCTTC 135830 |||| | ATGCTTATCA .......... .......... .......... .......... .......... 10 CAAACTCTCT TTGAGTATAT TAACCCTAAT GCTGGTTTCT GCCAGTGTTA TCAAAAGTGA 135890 | |||| || .......... .......... .......... .......... .....AAGT- CGAAAAATGC 24 AAAGCGCAAA AAGGCTCT-A TGGTCCGTGG GGACTTTAAG TGCAAAACAC -AAATAAAGC 135948 ||| ||| | ||||| | ||||||| | | ||||||| ||||| | | |||||||| AAAAAAAAAA GAAGCTCTAA GGGTCCGTAG AGGCTTTAAG CGCAAAGCGC AAAATAAAGT 84 GTGGGCTTTG ATGAAAAAAG GCGCAAAGGG AGAAAAAAAT AGAAATATAT ATGTTTGGTC 136008 ||||| | || ||||||| ||||||||| |||||| || | |||| ||| || ||| ||| GTGGG---T- AT-AAAAAAG ACGCAAAGGG AGAAAAGAAA ACAAATGTAT ATCTTTAGTC 139 CAAGGCTAAT AATTATAAAC ATGAATGACA AATATATAAC CAAAGAAATT GAAAAAAA-T 136067 |||||||||| |||||||||| |||||||||| ||||||| | ||||||||| |||||||| | CAAGGCTAAT AATTATAAAC ATGAATGACA AATATATGGC AAAAGAAATT GAAAAAAATT 199 TATGATAAGT GAAATGTCAA TTGTTTAGCG TCACTTCTTC -CAAAAGACT CATTGGCAAG 136126 || ||| | | ||| |||| | ||||||| |||||| || || | || |||||||||| TACGATGA-A GTAATATCAA TGATTTAGCG TCACTTTGTC ATAAGAAGCT CATTGGCAAG 258 GAAAAGTTTG CCTTAGAACC TTGATGACGA CACTAATGCG CACATGAATC TAGGCGAAGC 136186 |||| ||||| |||||||||| || |||| || || | | || ||||| | | ||| ||| | GAAACGTTTG CCTTAGAACC TTAATGATGA CATTGAAGCA CACATAGAGC AAGGTGAAAC 318 GCTCAACACG TTTTGGGCCT CGCTTCAGGG CTTAAGCGCG CCTTTGATAA CACTAGTTTC 136246 ||||||||| ||||| |||| | | | | |||||||||| | ACTCAACACG TTTTGAGCCT CATTCTAAAG CTTAAGCGCG C......... .......... 359 TGCACCTAGT GTTGTATTAT GTTCTTTTCT TTGGGTTGGG GATTGGAAGG AGTAAATCAG 136306 .......... .......... .......... .......... .......... .......... 359 AAATTTCTTA GGTAGGCATT CCCTGCCGGT ATCGTTGAAT TTCCACGGCA CTTGCAGAAG 136366 .......... .......... .......... .......... .......... .......... 359 AAACAAATGG AATTTTTGCT GTCATTTTTT TGATTCAACC AATTCAATAA CAATTTCTAG 136426 .......... .......... .......... .......... .......... .......... 359 AACTTATTGC AGTTCTCTAT ATTTGTATCT GTGATTACCA TGTAAATTAC GTAAAAACCA 136486 .......... .......... .......... .......... .......... .......... 359 CTAAAAAGTG TTTCTTATTG GGTGGTCCAT GATAGTTATG ATCTGTAGAA AGCAAAACTT 136546 .......... .......... .......... .......... .......... .......... 359 GAAGATATGT CGTGTGATTA GATGCGAGGC AGCTATGGGA GGAAGAAACT GTGCTAGGTA 136606 .......... .......... .......... .......... .......... .......... 359 TGTGAGGTTA TTACGACGTA CTTCATAGAT TGAATCTCAG TTACTCACCC GTCCACCTGC 136666 .......... .......... .......... .......... .......... .......... 359 ACGTGGGAGT AAGAATCAAA ACTCTCTGAG TTTATTTACT AGTTTCCCTA TTTTAAGTGA 136726 .......... .......... .......... .......... .......... .......... 359 CATAACCACC CTACCCTGGA TGATAATAGT TCTTGGATCA TTTAGGTCAA ATTGTTCACA 136786 .......... .......... .......... .......... .......... .......... 359 CCGAGCTTAA CTCTTGTTTC TATATATCAG TAGATGGGCT GATATAGCAG TGTGTAGTAG 136846 .......... .......... .......... .......... .......... .......... 359 CCTCGACACT TACTGGTTCA GTTATTGGTA CTGCTGGGCT GTGGGATCTG CTCTGTCTAA 136906 .......... .......... .......... .......... .......... .......... 359 GTGCATGTCA GCATATTTAA CTGTAGATGC TGTAAGTTAG TAGAATGCTC CACTGTTCTA 136966 .......... .......... .......... .......... .......... .......... 359 CTAAGTCCAA CTAATTAGAA GTTGCTAGTG GAAATAAGTT TTCTTAGGGA ACATGTTTGC 137026 .......... .......... .......... .......... .......... .......... 359 TATTTCTATT TCAATTTTCT CTCGTTTTTG TTCATTATTC TTGAATGAGT TAATTGTAAT 137086 .......... .......... .......... .......... .......... .......... 359 CAGTTTTTAG GTGTTAACTA TTTTTTCCTC ATATGAAAAA TCTTGACGTT GGTTCTCTCG 137146 .......... .......... .......... .......... .......... .......... 359 TCTTTGCTAG TTGATGTAGC GGTGTGCTTC CTTATTCTCT CTCATGTGGC TAAACAAATA 137206 || ||| | | | .......... TTAATGCA-C G......... .......... .......... .......... 369 AATTATTTGT AAACTAACAG GTAGTCATTC TCGTAATCAG GATTAGATGT GTGTGAACAG 137266 .......... .......... .......... .......... .......... .......... 369 TTCATGGATG TCAATGAAAT GATAAGGGAT GAGGACCTGA TCATGCAGAG AGCTAATTCT 137326 | | ||| || ||| || | -CCTTTGATA ACACTGATAT G......... .......... .......... .......... 389 CCAGGAAATG GTGTTGCTGC TCAATATTAT TCATCTAGAC CCGTTGGCAA TATCCGGCAA 137386 .......... .......... .......... .......... .......... .......... 389 TATGTTGCAA ATATGGTACC AAGTGTCAGA TCTCGGAGGC CAAGTGCACG AGAACTAAAT 137446 .......... .......... .......... .......... .......... .......... 389 CTTTTGAAGC GGAAAGCAAA AATAAGCTCA AAGGACCAAA CAAAAGGATG GAATAAGGAT 137506 .......... .......... .......... .......... .......... .......... 389 GGAGATACAG AAGCTCCACA AGCACAAGAT ATAATATCTC CTAGGGGCAT GTGTCCTGAC 137566 .......... .......... .......... .......... .......... .......... 389 ATGTCGAGCT CTAATAAGGT TACTAGATTT TCTAACTGTG CTGTACACAT AAATAATTCA 137626 .......... .......... .......... .......... .......... .......... 389 CTCACATTGA TATGCATATG TGTTTTCACT CATGTGCTGA AAGTTGCTCT CTTCTAGTAT 137686 .......... .......... .......... .......... .......... .......... 389 CACCATGTTT CTGGGTTCTG CTGTGTTCTG TTTTTCTTTG TTTTCTTTGT CTTTTGAGAT 137746 .......... .......... .......... .......... .......... .......... 389 TTAAAATTCA TATTTACTTG CTCACCTGTC ATATCAAACA TGCTAAAGGA CTATGCATGT 137806 .......... .......... .......... .......... .......... .......... 389 AATGGAGTGA AAAATTTCTC TACATTCAAT GATCCTTTTC TTTGTTCATT AACTTTTAGA 137866 .......... .......... .......... .......... .......... .......... 389 GTTCACAGGA TATTGATATC CTAATTTTAT GGTAGATGAT TGTATAACTT TTATGGATGC 137926 .......... .......... .......... .......... .......... .......... 389 ATTTTTTTTG GTTATTTCGT TTGTGGATAG ATGTTACTTA GTAAAGTCTT GAACGGTGAA 137986 .......... .......... .......... .......... .......... .......... 389 TCTTGTATGG GCATTGTACA ATGGGTATTT GTTTTCGGGT TATATAAGTT TGTTAGTTTG 138046 .......... .......... .......... .......... .......... .......... 389 GAACTCTTAA ATCCCTTGGC CTTCTTTGTG CAATTGCTAT TAAACCTAGG TCCACTTATT 138106 .......... .......... .......... .......... .......... .......... 389 AATCTGGGAT AAATCAAGGT CTCGAGGTCT CTATCCAGGA TTATACCTAA ATCTTGTCTT 138166 .......... .......... .......... .......... .......... .......... 389 GGCACGATAA CTATATCTAA TTTGATTTAG CCATCTATTA GTTATCCGTA GTTGCTTTCC 138226 .......... .......... .......... .......... .......... .......... 389 CTTGGTTCTA GTAAGTTTAT CTGTTTGGTG CCGTGTTTCT TTTACATTTT GATGTTCATT 138286 .......... .......... .......... .......... .......... .......... 389 GCTACTGAAT TCGTATGGAA GTGCAACTTG CAATCTTTCT GTGAGCGGTT TCTTCAAGAC 138346 .......... .......... .......... .......... .......... .......... 389 CAAGTTTAGG ATTGCAGGCT GTTCTTAGAT AATTGTCTGT GTGTTTTTGG CAGAGTTCAG 138406 .......... .......... .......... .......... .......... .......... 389 GTGTCACCTT TGTAGATACC TAGGCTACTC TTTTCTTTAT CCTGATGTCT TACTCAGGCT 138466 .......... .......... .......... .......... .......... .......... 389 TTGTAATGCT GTTGTAAAAG GAACACACTT CTTAATATCT GGATGTCTGT TTTAGGCTCT 138526 .......... .......... .......... .......... .......... .......... 389 GTAATTCCTG CCGTAAACCC AAGTGACAAA CTGGCCATAA ACTTGTTCAG AATTGGACTG 138586 .......... .......... .......... .......... .......... .......... 389 GCATCATATC TAGAGGATGT TGTTGATGTG TAGATTTATA TTTACTTTAC ATGCAGGAAT 138646 .......... .......... .......... .......... .......... .......... 389 CATATTGTAA TTACAAATCT ACGAGAAAAT ATAAATCTAT TAGTTAAAGT TGAGAACTTG 138706 .......... .......... .......... .......... .......... .......... 389 AGATCATGTA TGCAAAATAC GACACAACTG GTAATTTTGA ACAATTTCTT ATTCTGGGAA 138766 .......... .......... .......... .......... .......... .......... 389 ATTTTAAGGA GAGTTTTGAA ACTGTAGAAG TAGGTTACTT TGAACTGTTT CTATAGAATT 138826 .......... .......... .......... .......... .......... .......... 389 GAAGATATGG CCAGTTACAT TAAACTTTAT AACTGCCCTA TATATTTGAT ATTAGAGCTT 138886 .......... .......... .......... .......... .......... .......... 389 GCGGGTGAAT TAGTTGGTTG TTGGTTAATT TACTGTTAAG ATCCTGTATG CAAGATCTTG 138946 .......... .......... .......... .......... .......... .......... 389 CACCCGTTGT CTAAAATTCT AATTGGCCCT TGAAGATCAA TCCGAATCAT CCTTTTGATC 139006 .......... .......... .......... .......... .......... .......... 389 TGATAAGATA TTTTCTTCAA TCAATTAATC AACTATGCTG CAATTTCAAA CTTCTTATTC 139066 | ||| || .......... .......... .......... .......... ........GA CTTACCCTTT 401 TTTTCTAGAA CTTTTATTCA TGGAAATGGT AATCATCTCC ACTTGATTTC CAGTTCAGTA 139126 | | || |||||| || | |||| GCCTATCTAA GTTTTATACA T-TTAATG.. .......... .......... .......... 428 TTCTCAACAA CTTTGTATAT GTCATTTCAC GCAGTTCTGC ATTCAAAAAG CATGTCCTCA 139186 .......... .......... .......... .......... .......... .......... 428 AGTAGTTATT AATTTTTCGC TATTTGATCA ACCTCAAATG TAAGTCTTGA AATATATTTT 139246 | || | ||| ||| | .......... .......... .......... .......... ....TGTTAA AATTGATTCT 444 CTGCAGCTAC TTGGTGAAAA CATCTCTGAT GAAGATGGTC TAGAGTATGA TGGAGATAAG 139306 |||| | | TTGCA-CAA. .......... .......... .......... .......... .......... 452 ATTTGGCCAT TTCAGAGTTT TGTTGAGCAA CTCATCCTTG ATATGTTTGA TCCTCGTAAG 139366 .......... .......... .......... .......... .......... .......... 452 AAACTTCCAT TATCCTGTTG TGCTTAATTC ATTTCATGGT TTTCTTCTGA GATATTTGTT 139426 .......... .......... .......... .......... .......... .......... 452 TTGGATTTCT TCAGTATGGG AGGTTCGTCA TGGCAGTGTC ATGGCTATGA GAGAGATCTT 139486 .......... .......... .......... .......... .......... .......... 452 AACTCATCAA GGGGCTAATG CAGGAGTTAT CATTCCAGAC TTGTCATGTG ATAGTGCATT 139546 .......... .......... .......... .......... .......... .......... 452 AAATATTAAA ATAAAAGAGA GGGTAAACGA GAATACTGTC AAAAGGGAGA GGCCAATTGA 139606 .......... .......... .......... .......... .......... .......... 452 TCTTAATATG CAAGTTCCAC CTGATGAGTT GGAGTCAGTT TCCAAGAAAC TGAAGGTTGA 139666 .......... .......... .......... .......... .......... .......... 452 ACCTGAAGAT GCAGCTTTCT TGCCGATGGA TACCATGGTC TGTACTAGCA CGGATGGTGA 139726 .......... .......... .......... .......... .......... .......... 452 TCCTGGTGGT GTTAGTGTAA AAGTGGAAGA TGTTGGATTG AGTTTGGCTG TTGACCAGAC 139786 .......... .......... .......... .......... .......... .......... 452 AAATGGTGAA GTTAGCAGTG GTTCTGTTAA GTTCGAGACT CAATCTCATC TTAGTGGTGG 139846 .......... .......... .......... .......... .......... .......... 452 AATCCTGGGT AATGATATGT CAGATGAGAA ACGAGTTGGC GTGGATAAGA CTCCAATGGA 139906 .......... .......... .......... .......... .......... .......... 452 AAAGATGGGC GTTCTAGAAA ACCTTCCCGA GAATTGTGAG CTGATGAACT TGGTTAGATT 139966 .......... .......... .......... .......... .......... .......... 452 GGCTAGGCAT TCTTGGCTCA AGAATTGTGA ATTTCTTCAG GATTGTGCTA TTCGTTTCCT 140026 .......... .......... .......... .......... .......... .......... 452 ATGTGTCTTA TCATTGGAAC GGTATGGTTT CTCCTCCCTT GGTTTGATAT CTTTTGAGTA 140086 .......... .......... .......... .......... .......... .......... 452 TAGCTTTCAA TTCCCCCATC CAAAAAAATT TAAAATAAAA AGAAAGATGA ATACTCCCTC 140146 .......... .......... .......... .......... .......... .......... 452 TGTAACAATT TAATTTTAAA ATGCCCATTT TATCCTTAAT GAAATGATTA TAGCCACACA 140206 .......... .......... .......... .......... .......... .......... 452 AACTTCTATC ACTTATTTTA CACTATGAGT TTCAAAAGTC TTCTTTTATT TCTTAAACTC 140266 .......... .......... .......... .......... .......... .......... 452 CGTGACAAGT CAAACTAACT CATATAAAAT GGGACGGAGG GAGTAATCCA ATAGAAAAAG 140326 .......... .......... .......... .......... .......... .......... 452 AATGAGGAAT ACAGCATTTT ATTAATCTAT AGGATATTGA TAAATGATTT GGAATAACAA 140386 .......... .......... .......... .......... .......... .......... 452 ATAGGAACTA AGCTGCATAA AGATTGCACC ATTGTACTCT TTCTGGCTCA AATTTTTGAG 140446 .......... .......... .......... .......... .......... .......... 452 GCTTATAGCA GTGTGCTTTC CATTTTCAAA TATATGCACT CTTTTTTATC TTCTTTTTCT 140506 .......... .......... .......... .......... .......... .......... 452 GCCTTCCCCT AGATATTTCT TTAGCTGTAT CTCAGTTTTG TTTTATTACT GGTTGCTCCT 140566 .......... .......... .......... .......... .......... .......... 452 GCTTGATTCT GTAATTCCTG ACGTGAAGGG TTATTTATTT TTTGGGTTAC TAACCACCCA 140626 .......... .......... .......... .......... .......... .......... 452 TTTTGCTCTT TTCGCCGTTG ACAGTTTTGG AATTGAACTT TGTTGTATTA CTGATGGCCT 140686 .......... .......... .......... .......... .......... .......... 452 TTAATCCGTG GATTCCATAA TTCTCGACAT GAATGGTTAT TTTTTGTAGG TTACTGATAT 140746 .......... .......... .......... .......... .......... .......... 452 ATTCCACCCT ATCCCCCAAT TTTTTGTTAT TTCTGTCATT GACAGTTTTG GAGACTATGT 140806 .......... .......... .......... .......... .......... .......... 452 ATCGGATCAA GTTGTGGCTC CTGTTCGTGA GACTTGTGCA CAAGCTTTGG GTGCTGTGCT 140866 .......... .......... .......... .......... .......... .......... 452 TAAGTACATG CATCCTACTC TAGTTCATGA GACACTGAAT ATCTTGCTAC AGATGCAGGT 140926 || || .......... .......... .......... .......... .......... ..ATTCAC.. 458 AAATATGAGG CAAGCTCAGC CTTTTGTGGT TCAGTAAGCA TGGCTTTTAA GATTTTTAAC 140986 .......... .......... .......... .......... .......... .......... 458 TTCCATTGCA AGTTTATACT CTCCTTTCCC TCTAGTTAGT GATCTCCAAT CGAGATGGAT 141046 .......... .......... .......... .......... .......... .......... 458 TAGTATGGTT GTTATACTTC GTACAATTCA CTTTCATTTG AACCAATTAA TGAGCATTGT 141106 .......... .......... .......... .......... .......... .......... 458 TAAGCCTTAT CTTGTATTAC TCCCTTTTCT CCATTTATCC AATTCACAG- TGTCTTAGAA 141165 ||||||| | .......... .......... .......... .......... .........T TGTCTTATTA 469 TGCTAAAAGT GTTTAA 141181 || ||||| | |||| TGATAAAAAT TATTAA 485 hqPGS_C08HBa0336I24.1+_SGN-E538098- (135876 136227) ******************************************************************************** EST sequence 127 -strand 792 n (File: SGN-E538097-) 1 CTTTAAGCGC AAAGCGCAAA ATAAAGTGTG GGTATAAAAA AGACGCAAAG GGAGAAAAGA 61 AAACAAATGT ATATCTTTAG TCCAAGGCTA ATAATTATAA ACATGAATGA CAAATATATG 121 GCAAAAGAAA TTGAAAAAAA TTTACGATGA AGTAATATCA ATGATTTAGC GTCACTTTGT 181 CATAAGAAGC TCATTGGCAA GGAAACGTTT GCCTTAGAAC CTTAATGATG ACATTGAAGC 241 ACACATAGAG CAAGGTGAAA CACTCAACAC GTTTTGAGCC TCATTCTAAA GCTTAAGCGC 301 GCTTAATGCA CGCCTTTGAT AACACTGATA TGGACTTACC CTTTGCCTAT CTAAGTTTTA 361 TACATTTAAT GTGTTAAAAT TGATTCTTTG CACAAATTCA CTTGTCTTAT TATGATAAAA 421 ATTATTAAAT ATGATATGAG TTGCATATTT ATTTTCTTTT TAACATATAA TTATTTCTTT 481 ACTTAATTTT AAATTACTTG AATATTTGTG GTTGCTTTTA ATTAATCTTT TGCCTAATCA 541 AAATCTGAAC ATTTTCTTAC ATGTTTAATT TTGTTAAAAG CTTTATTCGA TTTTGGTGAT 601 AAATTCTTAA TGATCTGACC CTCTTTTTGT TTAAGGATAA CAAATTTTAA TAATTGGCTC 661 CCATTATTGT TTCTTTCACG GTTATGCCTT TTCATTTAGT ATATAAACAG AAGTCCTCAT 721 TCACTTTTCC TCGCGCTTTA ATCCACACTA CTTTCGTATA CTCTCAAAAA AAAAAAAAAA 781 AAACTCGAGG GG Predicted gene structure (within gDNA segment 134606 to 142182): Exon 1 135923 136227 ( 305 n); cDNA 1 302 ( 302 n); score: 0.798 Intron 1 136228 137156 ( 929 n); Pd: 0.000 (s: 0.80), Pa: 0.720 (s: 0) Exon 2 137157 137167 ( 11 n); cDNA 303 312 ( 10 n); score: 0.727 Intron 2 137168 137266 ( 99 n); Pd: 0.849 (s: 0), Pa: 0.965 (s: 0) Exon 3 137267 137287 ( 21 n); cDNA 313 332 ( 20 n); score: 0.619 Intron 3 137288 139054 (1767 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.57) Exon 4 139055 139094 ( 40 n); cDNA 333 371 ( 39 n); score: 0.575 Intron 4 139095 139230 ( 136 n); Pd: 0.847 (s: 0.57), Pa: 0.000 (s: 0) Exon 5 139231 139255 ( 25 n); cDNA 372 395 ( 24 n); score: 0.680 Intron 5 139256 140918 (1663 n); Pd: 0.000 (s: 0), Pa: 0.621 (s: 0) Exon 6 140919 140924 ( 6 n); cDNA 396 401 ( 6 n); score: 0.667 Intron 6 140925 141155 ( 231 n); Pd: 0.929 (s: 0), Pa: 0.415 (s: 0) Exon 7 141156 141181 ( 26 n); cDNA 402 428 ( 27 n); score: 0.673 PPA cDNA 766 784 MATCH C08HBa0336I24.1+ SGN-E538097- 0.798 434 0.548 C PGS_C08HBa0336I24.1+_SGN-E538097- (135923 136227,137157 137167,137267 137287,139055 139094,139231 139255,140919 140924,141156 141181) Alignment (genomic DNA sequence = upper lines): CTTTAAGTGC AAAACAC-AA ATAAAGCGTG GGCTTTGATG AAAAAAGGCG CAAAGGGAGA 135981 ||||||| || ||| | | || |||||| ||| || | || ||||||| || |||||||||| CTTTAAGCGC AAAGCGCAAA ATAAAGTGTG GG---T-AT- AAAAAAGACG CAAAGGGAGA 55 AAAAAATAGA AATATATATG TTTGGTCCAA GGCTAATAAT TATAAACATG AATGACAAAT 136041 ||| || | | ||| ||||| ||| |||||| |||||||||| |||||||||| |||||||||| AAAGAAAACA AATGTATATC TTTAGTCCAA GGCTAATAAT TATAAACATG AATGACAAAT 115 ATATAACCAA AGAAATTGAA AAAAA-TTAT GATAAGTGAA ATGTCAATTG TTTAGCGTCA 136100 |||| | || |||||||||| ||||| ||| ||| | | | || ||||| |||||||||| ATATGGCAAA AGAAATTGAA AAAAATTTAC GATGA-AGTA ATATCAATGA TTTAGCGTCA 174 CTTCTTC-CA AAAGACTCAT TGGCAAGGAA AAGTTTGCCT TAGAACCTTG ATGACGACAC 136159 ||| || | | | ||||| |||||||||| | |||||||| ||||||||| |||| |||| CTTTGTCATA AGAAGCTCAT TGGCAAGGAA ACGTTTGCCT TAGAACCTTA ATGATGACAT 234 TAATGCGCAC ATGAATCTAG GCGAAGCGCT CAACACGTTT TGGGCCTCGC TTCAGGGCTT 136219 | | || ||| || | | || | ||| | || |||||||||| || ||||| | | |||| TGAAGCACAC ATAGAGCAAG GTGAAACACT CAACACGTTT TGAGCCTCAT TCTAAAGCTT 294 AAGCGCGCCT TTGATAACAC TAGTTTCTGC ACCTAGTGTT GTATTATGTT CTTTTCTTTG 136279 |||||||| AAGCGCGC.. .......... .......... .......... .......... .......... 302 GGTTGGGGAT TGGAAGGAGT AAATCAGAAA TTTCTTAGGT AGGCATTCCC TGCCGGTATC 136339 .......... .......... .......... .......... .......... .......... 302 GTTGAATTTC CACGGCACTT GCAGAAGAAA CAAATGGAAT TTTTGCTGTC ATTTTTTTGA 136399 .......... .......... .......... .......... .......... .......... 302 TTCAACCAAT TCAATAACAA TTTCTAGAAC TTATTGCAGT TCTCTATATT TGTATCTGTG 136459 .......... .......... .......... .......... .......... .......... 302 ATTACCATGT AAATTACGTA AAAACCACTA AAAAGTGTTT CTTATTGGGT GGTCCATGAT 136519 .......... .......... .......... .......... .......... .......... 302 AGTTATGATC TGTAGAAAGC AAAACTTGAA GATATGTCGT GTGATTAGAT GCGAGGCAGC 136579 .......... .......... .......... .......... .......... .......... 302 TATGGGAGGA AGAAACTGTG CTAGGTATGT GAGGTTATTA CGACGTACTT CATAGATTGA 136639 .......... .......... .......... .......... .......... .......... 302 ATCTCAGTTA CTCACCCGTC CACCTGCACG TGGGAGTAAG AATCAAAACT CTCTGAGTTT 136699 .......... .......... .......... .......... .......... .......... 302 ATTTACTAGT TTCCCTATTT TAAGTGACAT AACCACCCTA CCCTGGATGA TAATAGTTCT 136759 .......... .......... .......... .......... .......... .......... 302 TGGATCATTT AGGTCAAATT GTTCACACCG AGCTTAACTC TTGTTTCTAT ATATCAGTAG 136819 .......... .......... .......... .......... .......... .......... 302 ATGGGCTGAT ATAGCAGTGT GTAGTAGCCT CGACACTTAC TGGTTCAGTT ATTGGTACTG 136879 .......... .......... .......... .......... .......... .......... 302 CTGGGCTGTG GGATCTGCTC TGTCTAAGTG CATGTCAGCA TATTTAACTG TAGATGCTGT 136939 .......... .......... .......... .......... .......... .......... 302 AAGTTAGTAG AATGCTCCAC TGTTCTACTA AGTCCAACTA ATTAGAAGTT GCTAGTGGAA 136999 .......... .......... .......... .......... .......... .......... 302 ATAAGTTTTC TTAGGGAACA TGTTTGCTAT TTCTATTTCA ATTTTCTCTC GTTTTTGTTC 137059 .......... .......... .......... .......... .......... .......... 302 ATTATTCTTG AATGAGTTAA TTGTAATCAG TTTTTAGGTG TTAACTATTT TTTCCTCATA 137119 .......... .......... .......... .......... .......... .......... 302 TGAAAAATCT TGACGTTGGT TCTCTCGTCT TTGCTAGTTG ATGTAGCGGT GTGCTTCCTT 137179 || ||| | || .......... .......... .......... .......TTA ATGCA-CG.. .......... 312 ATTCTCTCTC ATGTGGCTAA ACAAATAAAT TATTTGTAAA CTAACAGGTA GTCATTCTCG 137239 .......... .......... .......... .......... .......... .......... 312 TAATCAGGAT TAGATGTGTG TGAACAGTTC ATGGATGTCA ATGAAATGAT AAGGGATGAG 137299 | | ||| || ||| ||| .......... .......... .......-CC TTTGATAACA CTGATATG.. .......... 332 GACCTGATCA TGCAGAGAGC TAATTCTCCA GGAAATGGTG TTGCTGCTCA ATATTATTCA 137359 .......... .......... .......... .......... .......... .......... 332 TCTAGACCCG TTGGCAATAT CCGGCAATAT GTTGCAAATA TGGTACCAAG TGTCAGATCT 137419 .......... .......... .......... .......... .......... .......... 332 CGGAGGCCAA GTGCACGAGA ACTAAATCTT TTGAAGCGGA AAGCAAAAAT AAGCTCAAAG 137479 .......... .......... .......... .......... .......... .......... 332 GACCAAACAA AAGGATGGAA TAAGGATGGA GATACAGAAG CTCCACAAGC ACAAGATATA 137539 .......... .......... .......... .......... .......... .......... 332 ATATCTCCTA GGGGCATGTG TCCTGACATG TCGAGCTCTA ATAAGGTTAC TAGATTTTCT 137599 .......... .......... .......... .......... .......... .......... 332 AACTGTGCTG TACACATAAA TAATTCACTC ACATTGATAT GCATATGTGT TTTCACTCAT 137659 .......... .......... .......... .......... .......... .......... 332 GTGCTGAAAG TTGCTCTCTT CTAGTATCAC CATGTTTCTG GGTTCTGCTG TGTTCTGTTT 137719 .......... .......... .......... .......... .......... .......... 332 TTCTTTGTTT TCTTTGTCTT TTGAGATTTA AAATTCATAT TTACTTGCTC ACCTGTCATA 137779 .......... .......... .......... .......... .......... .......... 332 TCAAACATGC TAAAGGACTA TGCATGTAAT GGAGTGAAAA ATTTCTCTAC ATTCAATGAT 137839 .......... .......... .......... .......... .......... .......... 332 CCTTTTCTTT GTTCATTAAC TTTTAGAGTT CACAGGATAT TGATATCCTA ATTTTATGGT 137899 .......... .......... .......... .......... .......... .......... 332 AGATGATTGT ATAACTTTTA TGGATGCATT TTTTTTGGTT ATTTCGTTTG TGGATAGATG 137959 .......... .......... .......... .......... .......... .......... 332 TTACTTAGTA AAGTCTTGAA CGGTGAATCT TGTATGGGCA TTGTACAATG GGTATTTGTT 138019 .......... .......... .......... .......... .......... .......... 332 TTCGGGTTAT ATAAGTTTGT TAGTTTGGAA CTCTTAAATC CCTTGGCCTT CTTTGTGCAA 138079 .......... .......... .......... .......... .......... .......... 332 TTGCTATTAA ACCTAGGTCC ACTTATTAAT CTGGGATAAA TCAAGGTCTC GAGGTCTCTA 138139 .......... .......... .......... .......... .......... .......... 332 TCCAGGATTA TACCTAAATC TTGTCTTGGC ACGATAACTA TATCTAATTT GATTTAGCCA 138199 .......... .......... .......... .......... .......... .......... 332 TCTATTAGTT ATCCGTAGTT GCTTTCCCTT GGTTCTAGTA AGTTTATCTG TTTGGTGCCG 138259 .......... .......... .......... .......... .......... .......... 332 TGTTTCTTTT ACATTTTGAT GTTCATTGCT ACTGAATTCG TATGGAAGTG CAACTTGCAA 138319 .......... .......... .......... .......... .......... .......... 332 TCTTTCTGTG AGCGGTTTCT TCAAGACCAA GTTTAGGATT GCAGGCTGTT CTTAGATAAT 138379 .......... .......... .......... .......... .......... .......... 332 TGTCTGTGTG TTTTTGGCAG AGTTCAGGTG TCACCTTTGT AGATACCTAG GCTACTCTTT 138439 .......... .......... .......... .......... .......... .......... 332 TCTTTATCCT GATGTCTTAC TCAGGCTTTG TAATGCTGTT GTAAAAGGAA CACACTTCTT 138499 .......... .......... .......... .......... .......... .......... 332 AATATCTGGA TGTCTGTTTT AGGCTCTGTA ATTCCTGCCG TAAACCCAAG TGACAAACTG 138559 .......... .......... .......... .......... .......... .......... 332 GCCATAAACT TGTTCAGAAT TGGACTGGCA TCATATCTAG AGGATGTTGT TGATGTGTAG 138619 .......... .......... .......... .......... .......... .......... 332 ATTTATATTT ACTTTACATG CAGGAATCAT ATTGTAATTA CAAATCTACG AGAAAATATA 138679 .......... .......... .......... .......... .......... .......... 332 AATCTATTAG TTAAAGTTGA GAACTTGAGA TCATGTATGC AAAATACGAC ACAACTGGTA 138739 .......... .......... .......... .......... .......... .......... 332 ATTTTGAACA ATTTCTTATT CTGGGAAATT TTAAGGAGAG TTTTGAAACT GTAGAAGTAG 138799 .......... .......... .......... .......... .......... .......... 332 GTTACTTTGA ACTGTTTCTA TAGAATTGAA GATATGGCCA GTTACATTAA ACTTTATAAC 138859 .......... .......... .......... .......... .......... .......... 332 TGCCCTATAT ATTTGATATT AGAGCTTGCG GGTGAATTAG TTGGTTGTTG GTTAATTTAC 138919 .......... .......... .......... .......... .......... .......... 332 TGTTAAGATC CTGTATGCAA GATCTTGCAC CCGTTGTCTA AAATTCTAAT TGGCCCTTGA 138979 .......... .......... .......... .......... .......... .......... 332 AGATCAATCC GAATCATCCT TTTGATCTGA TAAGATATTT TCTTCAATCA ATTAATCAAC 139039 .......... .......... .......... .......... .......... .......... 332 TATGCTGCAA TTTCAAACTT CTTATTCTTT TCTAGAACTT TTATTCATGG AAATGGTAAT 139099 |||| || | | || || |||| ||| |||| .......... .....GACTT ACCCTTTGCC TATCTAAGTT TTATACAT-T TAATG..... 371 CATCTCCACT TGATTTCCAG TTCAGTATTC TCAACAACTT TGTATATGTC ATTTCACGCA 139159 .......... .......... .......... .......... .......... .......... 371 GTTCTGCATT CAAAAAGCAT GTCCTCAAGT AGTTATTAAT TTTTCGCTAT TTGATCAACC 139219 .......... .......... .......... .......... .......... .......... 371 TCAAATGTAA GTCTTGAAAT ATATTTTCTG CAGCTACTTG GTGAAAACAT CTCTGATGAA 139279 | || |||| ||| | || || | | .......... .TGTTAAAAT TGATTCTTTG CA-CAA.... .......... .......... 395 GATGGTCTAG AGTATGATGG AGATAAGATT TGGCCATTTC AGAGTTTTGT TGAGCAACTC 139339 .......... .......... .......... .......... .......... .......... 395 ATCCTTGATA TGTTTGATCC TCGTAAGAAA CTTCCATTAT CCTGTTGTGC TTAATTCATT 139399 .......... .......... .......... .......... .......... .......... 395 TCATGGTTTT CTTCTGAGAT ATTTGTTTTG GATTTCTTCA GTATGGGAGG TTCGTCATGG 139459 .......... .......... .......... .......... .......... .......... 395 CAGTGTCATG GCTATGAGAG AGATCTTAAC TCATCAAGGG GCTAATGCAG GAGTTATCAT 139519 .......... .......... .......... .......... .......... .......... 395 TCCAGACTTG TCATGTGATA GTGCATTAAA TATTAAAATA AAAGAGAGGG TAAACGAGAA 139579 .......... .......... .......... .......... .......... .......... 395 TACTGTCAAA AGGGAGAGGC CAATTGATCT TAATATGCAA GTTCCACCTG ATGAGTTGGA 139639 .......... .......... .......... .......... .......... .......... 395 GTCAGTTTCC AAGAAACTGA AGGTTGAACC TGAAGATGCA GCTTTCTTGC CGATGGATAC 139699 .......... .......... .......... .......... .......... .......... 395 CATGGTCTGT ACTAGCACGG ATGGTGATCC TGGTGGTGTT AGTGTAAAAG TGGAAGATGT 139759 .......... .......... .......... .......... .......... .......... 395 TGGATTGAGT TTGGCTGTTG ACCAGACAAA TGGTGAAGTT AGCAGTGGTT CTGTTAAGTT 139819 .......... .......... .......... .......... .......... .......... 395 CGAGACTCAA TCTCATCTTA GTGGTGGAAT CCTGGGTAAT GATATGTCAG ATGAGAAACG 139879 .......... .......... .......... .......... .......... .......... 395 AGTTGGCGTG GATAAGACTC CAATGGAAAA GATGGGCGTT CTAGAAAACC TTCCCGAGAA 139939 .......... .......... .......... .......... .......... .......... 395 TTGTGAGCTG ATGAACTTGG TTAGATTGGC TAGGCATTCT TGGCTCAAGA ATTGTGAATT 139999 .......... .......... .......... .......... .......... .......... 395 TCTTCAGGAT TGTGCTATTC GTTTCCTATG TGTCTTATCA TTGGAACGGT ATGGTTTCTC 140059 .......... .......... .......... .......... .......... .......... 395 CTCCCTTGGT TTGATATCTT TTGAGTATAG CTTTCAATTC CCCCATCCAA AAAAATTTAA 140119 .......... .......... .......... .......... .......... .......... 395 AATAAAAAGA AAGATGAATA CTCCCTCTGT AACAATTTAA TTTTAAAATG CCCATTTTAT 140179 .......... .......... .......... .......... .......... .......... 395 CCTTAATGAA ATGATTATAG CCACACAAAC TTCTATCACT TATTTTACAC TATGAGTTTC 140239 .......... .......... .......... .......... .......... .......... 395 AAAAGTCTTC TTTTATTTCT TAAACTCCGT GACAAGTCAA ACTAACTCAT ATAAAATGGG 140299 .......... .......... .......... .......... .......... .......... 395 ACGGAGGGAG TAATCCAATA GAAAAAGAAT GAGGAATACA GCATTTTATT AATCTATAGG 140359 .......... .......... .......... .......... .......... .......... 395 ATATTGATAA ATGATTTGGA ATAACAAATA GGAACTAAGC TGCATAAAGA TTGCACCATT 140419 .......... .......... .......... .......... .......... .......... 395 GTACTCTTTC TGGCTCAAAT TTTTGAGGCT TATAGCAGTG TGCTTTCCAT TTTCAAATAT 140479 .......... .......... .......... .......... .......... .......... 395 ATGCACTCTT TTTTATCTTC TTTTTCTGCC TTCCCCTAGA TATTTCTTTA GCTGTATCTC 140539 .......... .......... .......... .......... .......... .......... 395 AGTTTTGTTT TATTACTGGT TGCTCCTGCT TGATTCTGTA ATTCCTGACG TGAAGGGTTA 140599 .......... .......... .......... .......... .......... .......... 395 TTTATTTTTT GGGTTACTAA CCACCCATTT TGCTCTTTTC GCCGTTGACA GTTTTGGAAT 140659 .......... .......... .......... .......... .......... .......... 395 TGAACTTTGT TGTATTACTG ATGGCCTTTA ATCCGTGGAT TCCATAATTC TCGACATGAA 140719 .......... .......... .......... .......... .......... .......... 395 TGGTTATTTT TTGTAGGTTA CTGATATATT CCACCCTATC CCCCAATTTT TTGTTATTTC 140779 .......... .......... .......... .......... .......... .......... 395 TGTCATTGAC AGTTTTGGAG ACTATGTATC GGATCAAGTT GTGGCTCCTG TTCGTGAGAC 140839 .......... .......... .......... .......... .......... .......... 395 TTGTGCACAA GCTTTGGGTG CTGTGCTTAA GTACATGCAT CCTACTCTAG TTCATGAGAC 140899 .......... .......... .......... .......... .......... .......... 395 ACTGAATATC TTGCTACAGA TGCAGGTAAA TATGAGGCAA GCTCAGCCTT TTGTGGTTCA 140959 | | || .......... .........A TTCAC..... .......... .......... .......... 401 GTAAGCATGG CTTTTAAGAT TTTTAACTTC CATTGCAAGT TTATACTCTC CTTTCCCTCT 141019 .......... .......... .......... .......... .......... .......... 401 AGTTAGTGAT CTCCAATCGA GATGGATTAG TATGGTTGTT ATACTTCGTA CAATTCACTT 141079 .......... .......... .......... .......... .......... .......... 401 TCATTTGAAC CAATTAATGA GCATTGTTAA GCCTTATCTT GTATTACTCC CTTTTCTCCA 141139 .......... .......... .......... .......... .......... .......... 401 TTTATCCAAT TCACAG-TGT CTTAGAATGC TAAAAGTGTT TAA 141181 ||| |||| ||| ||||| | | ||| .......... ......TTGT CTTATTATGA TAAAAATTAT TAA 428 hqPGS_C08HBa0336I24.1+_SGN-E538097- (135923 136227) Total number of EST alignments reported: 369 ________________________________________________________________________________ Predicted gene locations (17) in segment 1 to 142182: PGL 1 (- strand): 6526 4560 AGS-1 (6526 4560) SCR (e 0.996) Exon 1 6526 4560 (1967 n); score: 0.996 PGS (5013 4560) SGN-E216655- PGS (5300 4570) SGN-E320453- PGS (5069 4570) SGN-E203308- PGS (4960 4570) SGN-E221730- PGS (5282 4574) SGN-E317782- PGS (5222 4574) SGN-E378012+ PGS (5222 4575) SGN-E378013- PGS (5188 4575) SGN-E396266- PGS (5056 4575) SGN-E241713- PGS (5044 4575) SGN-E231932- PGS (4960 4575) SGN-E239647- PGS (5012 4592) SGN-E227346- PGS (4979 4592) SGN-E225510- PGS (4867 4595) SGN-E225303- PGS (5183 4598) SGN-E342182+ PGS (4828 4632) SGN-E222668- PGS (5056 4634) SGN-E229636- PGS (5335 4635) SGN-E326202+ PGS (5195 4685) SGN-E279519- PGS (5136 4745) SGN-E317625+ PGS (5223 4752) SGN-E390549+ PGS (5329 4801) SGN-E236547+ PGS (5183 4833) SGN-E336881+ PGS (5419 4863) SGN-E317358+ PGS (5312 4885) SGN-E216715+ PGS (5741 5101) SGN-E242875+ PGS (5592 5113) SGN-E323261+ PGS (5522 5124) SGN-E319717+ PGS (5517 5154) SGN-E290525+ PGS (5741 5164) SGN-E241903+ PGS (5814 5175) SGN-E322245+ PGS (5516 5203) SGN-E290521+ PGS (5934 5217) SGN-E326236+ PGS (5994 5245) SGN-E334025+ PGS (5741 5263) SGN-E243580+ PGS (5882 5310) SGN-E313577+ PGS (6247 5546) SGN-E314781+ PGS (6260 5551) SGN-E340679+ PGS (6093 5555) SGN-E321823+ PGS (6326 5578) SGN-E314333+ PGS (6200 5613) SGN-E326293+ PGS (6193 5617) SGN-E313171+ PGS (6408 5701) SGN-E317072+ PGS (6510 5708) SGN-E329108+ PGS (6499 5711) SGN-E316553+ PGS (6470 5711) SGN-E315871+ PGS (6510 5714) SGN-E328643+ PGS (6247 5715) SGN-E314737+ PGS (6486 5720) SGN-E315745+ PGS (6505 5721) SGN-E315354+ PGS (6470 5724) SGN-E327936+ PGS (6507 5727) SGN-E315203+ PGS (6514 5733) SGN-E327650+ PGS (6512 5733) SGN-E322844+ PGS (6492 5733) SGN-E320579+ PGS (6516 5743) SGN-E316597+ PGS (6512 5753) SGN-E319980+ PGS (6505 5753) SGN-E328939+ PGS (6482 5753) SGN-E315843+ PGS (6512 5758) SGN-E315180+ PGS (6179 5759) SGN-E326412+ PGS (6512 5760) SGN-E317780+ PGS (6509 5776) SGN-E318091+ PGS (6505 5778) SGN-E329018+ PGS (6499 5778) SGN-E316433+ PGS (6501 5788) SGN-E314991+ PGS (6512 5791) SGN-E339959+ PGS (6510 5792) SGN-E317913+ PGS (6511 5793) SGN-E326071+ PGS (6512 5816) SGN-E320020+ PGS (6473 5816) SGN-E315584+ PGS (6385 5816) SGN-E316925+ PGS (6449 5822) SGN-E318205+ PGS (6512 5823) SGN-E346609+ PGS (6512 5823) SGN-E326119+ PGS (6512 5823) SGN-E343367+ PGS (6511 5823) SGN-E317091+ PGS (6510 5823) SGN-E317449+ PGS (6499 5823) SGN-E318179+ PGS (6511 5825) SGN-E316169+ PGS (6519 5826) SGN-E323178+ PGS (6509 5826) SGN-E328019+ PGS (6507 5826) SGN-E334447+ PGS (6507 5826) SGN-E334547+ PGS (6509 5831) SGN-E314873+ PGS (6512 5833) SGN-E326499+ PGS (6511 5835) SGN-E316082+ PGS (6526 5836) SGN-E328506+ PGS (6511 5848) SGN-E313146+ PGS (6512 5876) SGN-E312861+ PGS (6516 5898) SGN-E325586+ PGS (6512 5904) SGN-E325657+ PGS (6511 5906) SGN-E317269+ PGS (6512 5907) SGN-E312222+ PGS (6486 5910) SGN-E313163+ PGS (6408 5917) SGN-E316976+ PGS (6504 5919) SGN-E325836+ PGS (6512 5920) SGN-E314459+ PGS (6470 5920) SGN-E327214+ PGS (6511 5926) SGN-E324317+ PGS (6511 5948) SGN-E311992+ PGS (6506 5948) SGN-E310420+ PGS (6507 5955) SGN-E316163+ PGS (6516 5964) SGN-E325526+ PGS (6512 5969) SGN-E312364+ PGS (6506 5969) SGN-E324320+ PGS (6486 5969) SGN-E326254+ PGS (6485 5969) SGN-E203001+ PGS (6510 5971) SGN-E330100+ PGS (6509 5971) SGN-E313259+ PGS (6516 5978) SGN-E319697+ PGS (6512 5978) SGN-E347000+ PGS (6510 5978) SGN-E324204+ PGS (6489 5978) SGN-E330745+ PGS (6435 5978) SGN-E317244+ PGS (6512 5980) SGN-E324624+ PGS (6512 5980) SGN-E321227+ PGS (6507 5980) SGN-E312738+ PGS (6486 5980) SGN-E313833+ PGS (6476 5980) SGN-E326256+ PGS (6512 5985) SGN-E312803+ PGS (6489 5985) SGN-E330622+ PGS (6510 5989) SGN-E328761+ PGS (6492 5992) SGN-E320580+ PGS (6392 6002) SGN-E202925+ PGS (6512 6013) SGN-E325113+ PGS (6507 6027) SGN-E324169+ PGS (6486 6027) SGN-E311881+ PGS (6478 6027) SGN-E323529+ PGS (6492 6028) SGN-E320343+ PGS (6512 6039) SGN-E313751+ PGS (6509 6040) SGN-E319313+ PGS (6479 6040) SGN-E312841+ PGS (6517 6043) SGN-E313746+ PGS (6507 6069) SGN-E311565+ PGS (6514 6080) SGN-E311538+ PGS (6512 6080) SGN-E313063+ PGS (6504 6080) SGN-E324882+ PGS (6507 6081) SGN-E313346+ PGS (6498 6081) SGN-E326402+ PGS (6456 6082) SGN-E325498+ PGS (6505 6089) SGN-E335708+ PGS (6496 6089) SGN-E331180+ PGS (6499 6090) SGN-E337083+ PGS (6518 6096) SGN-E320713+ PGS (6476 6119) SGN-E317525+ PGS (6516 6142) SGN-E325560+ PGS (6485 6182) SGN-E281487+ PGS (6492 6212) SGN-E312021+ PGS (6509 6229) SGN-E314863+ PGS (6423 6238) SGN-E289925+ PGS (6518 6262) SGN-E281327+ 3-phase translation of AGS-1 (-strand): . . . . . . 6526 AACACAATACAATGTCTTCTTCTACTCCTAATACTCTTCCTTTATTATCCACCAACAAAT N T I Q C L L L L L I L F L Y Y P P T N T Q Y N V F F Y S - Y S S F I I H Q Q I H N T M S S S T P N T L P L L S T N K . . . . . . 6466 CCCTCTCTTCTCCCTTCACCAACAACCACTCTACTTTCTTATCAAAACCCTCTCAACCTT P S L L P S P T T T L L S Y Q N P L N L P L F S L H Q Q P L Y F L I K T L S T F S L S S P F T N N H S T F L S K P S Q P . . . . . . 6406 TCCTCCATGGAAGGCGCTGTCAAAGTTTCAAGGTTTCATGCAACGTTGGCGAGCATGACA S S M E G A V K V S R F H A T L A S M T P P W K A L S K F Q G F M Q R W R A - Q F L H G R R C Q S F K V S C N V G E H D . . . . . . 6346 AAAACCTTGACGCTGTTGATAGGAGAAATGTTCTTTTAGGGTTAGGAGGTTTTTATGGTG K T L T L L I G E M F F - G - E V F M V K P - R C - - E K C S F R V R R F L W C K N L D A V D R R N V L L G L G G F Y G . . . . . . 6286 CAGCTAATCTTGCACCATTAGCCTCTGCTGCTCCTATACCACCACCTGATCTCAAATCTT Q L I L H H - P L L L L Y H H L I S N L S - S C T I S L C C S Y T T T - S Q I L A A N L A P L A S A A P I P P P D L K S . . . . . . 6226 GTGGTGTTGCCCATATAGATGATAAAGGTACTGAAGTCTCATACAGTTGTTGCCCTCCTG V V L P I - M I K V L K S H T V V A L L W C C P Y R - - R Y - S L I Q L L P S C C G V A H I D D K G T E V S Y S C C P P . . . . . . 6166 TACCTGATGATATCGATAGCGTTCCGTACTACAAGTTCCCTCCTATGACGAAACTCCGCA Y L M I S I A F R T T S S L L - R N S A T - - Y R - R S V L Q V P S Y D E T P H V P D D I D S V P Y Y K F P P M T K L R . . . . . . 6106 TCCGCCCCCCTGCTCATGCGGCGGATGAGGAGTACGTAGCCAAGTATCAATTGGCTACAA S A P L L M R R M R S T - P S I N W L Q P P P C S C G G - G V R S Q V S I G Y K I R P P A H A A D E E Y V A K Y Q L A T . . . . . . 6046 GTCGAATGAGGGAACTTGATAAAGACCCTTTTGACCCTCTTGGGTTTAAACAACAAGCTA V E - G N L I K T L L T L L G L N N K L S N E G T - - R P F - P S W V - T T S - S R M R E L D K D P F D P L G F K Q Q A . . . . . . 5986 ATATTCATTGTGCTTATTGTAACGGTGCTTATAAAATTGGTGGTAAAGAATTGCAAGTTC I F I V L I V T V L I K L V V K N C K F Y S L C L L - R C L - N W W - R I A S S N I H C A Y C N G A Y K I G G K E L Q V . . . . . . 5926 ATTTCTCGTGGCTTTTCTTTCCGTTCCATAGATGGTACTTGTACTTTTACGAAAGGATAT I S R G F S F R S I D G T C T F T K G Y F L V A F L S V P - M V L V L L R K D I H F S W L F F P F H R W Y L Y F Y E R I . . . . . . 5866 TGGGGTCACTTATTAATGATCCAACTTTTGCTTTACCTTACTGGAATTGGGATCATCCAA W G H L L M I Q L L L Y L T G I G I I Q G V T Y - - S N F C F T L L E L G S S K L G S L I N D P T F A L P Y W N W D H P . . . . . . 5806 AAGGTATGCGTATACCTCCCATGTTTGATCGTGAGGGTTCATCTCTTTACGATGAGAAAC K V C V Y L P C L I V R V H L F T M R N R Y A Y T S H V - S - G F I S L R - E T K G M R I P P M F D R E G S S L Y D E K . . . . . . 5746 GTAACCAAAATCATCGCAATGGAACTATTATTGATCTTGGTCATTTTGGTAAGGACGTCG V T K I I A M E L L L I L V I L V R T S - P K S S Q W N Y Y - S W S F W - G R R R N Q N H R N G T I I D L G H F G K D V . . . . . . 5686 AAACACCTCAGCTACAGATAATGACTAATAATTTAACACTAATGTACCGTCAAATGGTTA K H L S Y R - - L I I - H - C T V K W L N T S A T D N D - - F N T N V P S N G Y E T P Q L Q I M T N N L T L M Y R Q M V . . . . . . 5626 CTAATGCTCCTTGCCCGTCTCAATTCTTCGGTGCTGCTTACCCTCTGGGTTCTGATCCAG L M L L A R L N S S V L L T L W V L I Q - C S L P V S I L R C C L P S G F - S R T N A P C P S Q F F G A A Y P L G S D P . . . . . . 5566 AACCAGGCATGGGTACTATTGAGAATATTCCTCATACACCGGTCCATATCTGGACCGGTG N Q A W V L L R I F L I H R S I S G P V T R H G Y Y - E Y S S Y T G P Y L D R - E P G M G T I E N I P H T P V H I W T G . . . . . . 5506 ATAGTCCTAGACAAGGACACGGTGAAGACATGGGTAATTTCTATTCAGCTGGTTTAGACC I V L D K D T V K T W V I S I Q L V - T - S - T R T R - R H G - F L F S W F R P D S P R Q G H G E D M G N F Y S A G L D . . . . . . 5446 CGCTTTTCTACTGTCACCATGCTAATGTGGACAGGATGTGGAACGAGTGGAAATTAATTG R F S T V T M L M W T G C G T S G N - L A F L L S P C - C G Q D V E R V E I N W P L F Y C H H A N V D R M W N E W K L I . . . . . . 5386 GCGGGAAAAGAAGGGATTTATCAAATAAAGATTGGTTGAACTCTGAATTCTTTTTCTACG A G K E G I Y Q I K I G - T L N S F S T R E K K G F I K - R L V E L - I L F L R G G K R R D L S N K D W L N S E F F F Y . . . . . . 5326 ATGAAAATCGTAACCCTTACCGCGTGAAAGTCCGTGATTGTTTGGATAGTAAAAAAATGG M K I V T L T A - K S V I V W I V K K W - K S - P L P R E S P - L F G - - K N G D E N R N P Y R V K V R D C L D S K K M . . . . . . 5266 GATTCGATTACGCGCCAATGCCCACTCCATGGCGTAATTTCAAACCAATCAGAAGGTCAT D S I T R Q C P L H G V I S N Q S E G H I R L R A N A H S M A - F Q T N Q K V I G F D Y A P M P T P W R N F K P I R R S . . . . . . 5206 CATCAGGAAAAGTGAATACAGCGTCAATTGCACCAGTTAGCAAGGTGTTCCCACTGGCCA H Q E K - I Q R Q L H Q L A R C S H W P I R K S E Y S V N C T S - Q G V P T G Q S S G K V N T A S I A P V S K V F P L A . . . . . . 5146 AGCTGGACCGTGCGATTTCGTTCTCGATCACGCGGCCAGCTTCGTCAAGGACAACACAAG S W T V R F R S R S R G Q L R Q G Q H K A G P C D F V L D H A A S F V K D N T R K L D R A I S F S I T R P A S S R T T Q . . . . . . 5086 AGAAAAATGAGCAGGAGGAGATTCTGACATTCAATAAAATGGCATATGATGATACGAAGT R K M S R R R F - H S I K W H M M I R S E K - A G G D S D I Q - N G I - - Y E V E K N E Q E E I L T F N K M A Y D D T K . . . . . . 5026 ATGTAAGGTTCGATGTGTTTTTGAACGTGGACAAGACTGTGAATGCAGAAGAACTTGATA M - G S M C F - T W T R L - M Q K N L I C K V R C V F E R G Q D C E C R R T - - Y V R F D V F L N V D K T V N A E E L D . . . . . . 4966 AGGCGGAGTTTGCGGGGAGTTATACTAGCTTGCCTCATGTTCATGGAAATAATGATAATC R R S L R G V I L A C L M F M E I M I I G G V C G E L Y - L A S C S W K - - - S K A E F A G S Y T S L P H V H G N N D N . . . . . . 4906 ATGTTAAGGATGTTACTTTTACGCTGGCGATAACTGAACTGTTGGAGGATATTGGATTGG M L R M L L L R W R - L N C W R I L D W C - G C Y F Y A G D N - T V G G Y W I G H V K D V T F T L A I T E L L E D I G L . . . . . . 4846 AAGATGAAGATACAATTGCGGTAACTTTGGTTCCAAAAGTTGGTGGTGAAGGTGTATCCA K M K I Q L R - L W F Q K L V V K V Y P R - R Y N C G N F G S K S W W - R C I H E D E D T I A V T L V P K V G G E G V S . . . . . . 4786 TTGAAAGTGTGGAGATCAAGCTTGAGGATTGTTAAAGCCTTCATGAGTTGGTGGCTATGG L K V W R S S L R I V K A F M S W W L W - K C G D Q A - G L L K P S - V G G Y G I E S V E I K L E D C - S L H E L V A M . . . . . . 4726 TGCCAAATTTTATGTTTAATTAGTTTAATTGTGTGTGGTTTGGTTATGTTTATGTTATGT C Q I L C L I S L I V C G L V M F M L C A K F Y V - L V - L C V V W L C L C Y V V P N F M F N - F N C V W F G Y V Y V M . . . . . . 4666 TAAAATGAAATGTATCAGCTGGATAGCTCATTACTGCCTTGCTAGTTTTGTTGATGCTAT - N E M Y Q L D S S L L P C - F C - C Y K M K C I S W I A H Y C L A S F V D A I L K - N V S A G - L I T A L L V L L M L . . . . . 4606 CTATGAAATAAAAAAATAAATGGTTGTCTTTCATTTAATTTTATGTC L - N K K I N G C L S F N F M Y E I K K - M V V F H L I L C S M K - K N K W L S F I - F Y V Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0336I24.1-_PGL-1_AGS-1_PPS_1 (6524 4752) (frame '0'; 1770 bp, 590 residues) 1 HNTMSSSTPN TLPLLSTNKS LSSPFTNNHS TFLSKPSQPF LHGRRCQSFK VSCNVGEHDK 61 NLDAVDRRNV LLGLGGFYGA ANLAPLASAA PIPPPDLKSC GVAHIDDKGT EVSYSCCPPV 121 PDDIDSVPYY KFPPMTKLRI RPPAHAADEE YVAKYQLATS RMRELDKDPF DPLGFKQQAN 181 IHCAYCNGAY KIGGKELQVH FSWLFFPFHR WYLYFYERIL GSLINDPTFA LPYWNWDHPK 241 GMRIPPMFDR EGSSLYDEKR NQNHRNGTII DLGHFGKDVE TPQLQIMTNN LTLMYRQMVT 301 NAPCPSQFFG AAYPLGSDPE PGMGTIENIP HTPVHIWTGD SPRQGHGEDM GNFYSAGLDP 361 LFYCHHANVD RMWNEWKLIG GKRRDLSNKD WLNSEFFFYD ENRNPYRVKV RDCLDSKKMG 421 FDYAPMPTPW RNFKPIRRSS SGKVNTASIA PVSKVFPLAK LDRAISFSIT RPASSRTTQE 481 KNEQEEILTF NKMAYDDTKY VRFDVFLNVD KTVNAEELDK AEFAGSYTSL PHVHGNNDNH 541 VKDVTFTLAI TELLEDIGLE DEDTIAVTLV PKVGGEGVSI ESVEIKLEDC - 3-phase translation of AGS-1 (+strand): . . . . . . 4560 GACATAAAATTAAATGAAAGACAACCATTTATTTTTTTATTTCATAGATAGCATCAACAA D I K L N E R Q P F I F L F H R - H Q Q T - N - M K D N H L F F Y F I D S I N K H K I K - K T T I Y F F I S - I A S T . . . . . . 4620 AACTAGCAAGGCAGTAATGAGCTATCCAGCTGATACATTTCATTTTAACATAACATAAAC N - Q G S N E L S S - Y I S F - H N I N T S K A V M S Y P A D T F H F N I T - T K L A R Q - - A I Q L I H F I L T - H K . . . . . . 4680 ATAACCAAACCACACACAATTAAACTAATTAAACATAAAATTTGGCACCATAGCCACCAA I T K P H T I K L I K H K I W H H S H Q - P N H T Q L N - L N I K F G T I A T N H N Q T T H N - T N - T - N L A P - P P . . . . . . 4740 CTCATGAAGGCTTTAACAATCCTCAAGCTTGATCTCCACACTTTCAATGGATACACCTTC L M K A L T I L K L D L H T F N G Y T F S - R L - Q S S S L I S T L S M D T P S T H E G F N N P Q A - S P H F Q W I H L . . . . . . 4800 ACCACCAACTTTTGGAACCAAAGTTACCGCAATTGTATCTTCATCTTCCAATCCAATATC T T N F W N Q S Y R N C I F I F Q S N I P P T F G T K V T A I V S S S S N P I S H H Q L L E P K L P Q L Y L H L P I Q Y . . . . . . 4860 CTCCAACAGTTCAGTTATCGCCAGCGTAAAAGTAACATCCTTAACATGATTATCATTATT L Q Q F S Y R Q R K S N I L N M I I I I S N S S V I A S V K V T S L T - L S L F P P T V Q L S P A - K - H P - H D Y H Y . . . . . . 4920 TCCATGAACATGAGGCAAGCTAGTATAACTCCCCGCAAACTCCGCCTTATCAAGTTCTTC S M N M R Q A S I T P R K L R L I K F F P - T - G K L V - L P A N S A L S S S S F H E H E A S - Y N S P Q T P P Y Q V L . . . . . . 4980 TGCATTCACAGTCTTGTCCACGTTCAAAAACACATCGAACCTTACATACTTCGTATCATC C I H S L V H V Q K H I E P Y I L R I I A F T V L S T F K N T S N L T Y F V S S L H S Q S C P R S K T H R T L H T S Y H . . . . . . 5040 ATATGCCATTTTATTGAATGTCAGAATCTCCTCCTGCTCATTTTTCTCTTGTGTTGTCCT I C H F I E C Q N L L L L I F L L C C P Y A I L L N V R I S S C S F F S C V V L H M P F Y - M S E S P P A H F S L V L S . . . . . . 5100 TGACGAAGCTGGCCGCGTGATCGAGAACGAAATCGCACGGTCCAGCTTGGCCAGTGGGAA - R S W P R D R E R N R T V Q L G Q W E D E A G R V I E N E I A R S S L A S G N L T K L A A - S R T K S H G P A W P V G . . . . . . 5160 CACCTTGCTAACTGGTGCAATTGACGCTGTATTCACTTTTCCTGATGATGACCTTCTGAT H L A N W C N - R C I H F S - - - P S D T L L T G A I D A V F T F P D D D L L I T P C - L V Q L T L Y S L F L M M T F - . . . . . . 5220 TGGTTTGAAATTACGCCATGGAGTGGGCATTGGCGCGTAATCGAATCCCATTTTTTTACT W F E I T P W S G H W R V I E S H F F T G L K L R H G V G I G A - S N P I F L L L V - N Y A M E W A L A R N R I P F F Y . . . . . . 5280 ATCCAAACAATCACGGACTTTCACGCGGTAAGGGTTACGATTTTCATCGTAGAAAAAGAA I Q T I T D F H A V R V T I F I V E K E S K Q S R T F T R - G L R F S S - K K N Y P N N H G L S R G K G Y D F H R R K R . . . . . . 5340 TTCAGAGTTCAACCAATCTTTATTTGATAAATCCCTTCTTTTCCCGCCAATTAATTTCCA F R V Q P I F I - - I P S F P A N - F P S E F N Q S L F D K S L L F P P I N F H I Q S S T N L Y L I N P F F S R Q L I S . . . . . . 5400 CTCGTTCCACATCCTGTCCACATTAGCATGGTGACAGTAGAAAAGCGGGTCTAAACCAGC L V P H P V H I S M V T V E K R V - T S S F H I L S T L A W - Q - K S G S K P A T R S T S C P H - H G D S R K A G L N Q . . . . . . 5460 TGAATAGAAATTACCCATGTCTTCACCGTGTCCTTGTCTAGGACTATCACCGGTCCAGAT - I E I T H V F T V S L S R T I T G P D E - K L P M S S P C P C L G L S P V Q I L N R N Y P C L H R V L V - D Y H R S R . . . . . . 5520 ATGGACCGGTGTATGAGGAATATTCTCAATAGTACCCATGCCTGGTTCTGGATCAGAACC M D R C M R N I L N S T H A W F W I R T W T G V - G I F S I V P M P G S G S E P Y G P V Y E E Y S Q - Y P C L V L D Q N . . . . . . 5580 CAGAGGGTAAGCAGCACCGAAGAATTGAGACGGGCAAGGAGCATTAGTAACCATTTGACG Q R V S S T E E L R R A R S I S N H L T R G - A A P K N - D G Q G A L V T I - R P E G K Q H R R I E T G K E H - - P F D . . . . . . 5640 GTACATTAGTGTTAAATTATTAGTCATTATCTGTAGCTGAGGTGTTTCGACGTCCTTACC V H - C - I I S H Y L - L R C F D V L T Y I S V K L L V I I C S - G V S T S L P G T L V L N Y - S L S V A E V F R R P Y . . . . . . 5700 AAAATGACCAAGATCAATAATAGTTCCATTGCGATGATTTTGGTTACGTTTCTCATCGTA K M T K I N N S S I A M I L V T F L I V K - P R S I I V P L R - F W L R F S S - Q N D Q D Q - - F H C D D F G Y V S H R . . . . . . 5760 AAGAGATGAACCCTCACGATCAAACATGGGAGGTATACGCATACCTTTTGGATGATCCCA K R - T L T I K H G R Y T H T F W M I P R D E P S R S N M G G I R I P F G - S Q K E M N P H D Q T W E V Y A Y L L D D P . . . . . . 5820 ATTCCAGTAAGGTAAAGCAAAAGTTGGATCATTAATAAGTGACCCCAATATCCTTTCGTA I P V R - S K S W I I N K - P Q Y P F V F Q - G K A K V G S L I S D P N I L S - N S S K V K Q K L D H - - V T P I S F R . . . . . . 5880 AAAGTACAAGTACCATCTATGGAACGGAAAGAAAAGCCACGAGAAATGAACTTGCAATTC K V Q V P S M E R K E K P R E M N L Q F K Y K Y H L W N G K K S H E K - T C N S K S T S T I Y G T E R K A T R N E L A I . . . . . . 5940 TTTACCACCAATTTTATAAGCACCGTTACAATAAGCACAATGAATATTAGCTTGTTGTTT F T T N F I S T V T I S T M N I S L L F L P P I L - A P L Q - A Q - I L A C C L L Y H Q F Y K H R Y N K H N E Y - L V V . . . . . . 6000 AAACCCAAGAGGGTCAAAAGGGTCTTTATCAAGTTCCCTCATTCGACTTGTAGCCAATTG K P K R V K R V F I K F P H S T C S Q L N P R G S K G S L S S S L I R L V A N - - T Q E G Q K G L Y Q V P S F D L - P I . . . . . . 6060 ATACTTGGCTACGTACTCCTCATCCGCCGCATGAGCAGGGGGGCGGATGCGGAGTTTCGT I L G Y V L L I R R M S R G A D A E F R Y L A T Y S S S A A - A G G R M R S F V D T W L R T P H P P H E Q G G G C G V S . . . . . . 6120 CATAGGAGGGAACTTGTAGTACGGAACGCTATCGATATCATCAGGTACAGGAGGGCAACA H R R E L V V R N A I D I I R Y R R A T I G G N L - Y G T L S I S S G T G G Q Q S - E G T C S T E R Y R Y H Q V Q E G N . . . . . . 6180 ACTGTATGAGACTTCAGTACCTTTATCATCTATATGGGCAACACCACAAGATTTGAGATC T V - D F S T F I I Y M G N T T R F E I L Y E T S V P L S S I W A T P Q D L R S N C M R L Q Y L Y H L Y G Q H H K I - D . . . . . . 6240 AGGTGGTGGTATAGGAGCAGCAGAGGCTAATGGTGCAAGATTAGCTGCACCATAAAAACC R W W Y R S S R G - W C K I S C T I K T G G G I G A A E A N G A R L A A P - K P Q V V V - E Q Q R L M V Q D - L H H K N . . . . . . 6300 TCCTAACCCTAAAAGAACATTTCTCCTATCAACAGCGTCAAGGTTTTTGTCATGCTCGCC S - P - K N I S P I N S V K V F V M L A P N P K R T F L L S T A S R F L S C S P L L T L K E H F S Y Q Q R Q G F C H A R . . . . . . 6360 AACGTTGCATGAAACCTTGAAACTTTGACAGCGCCTTCCATGGAGGAAAGGTTGAGAGGG N V A - N L E T L T A P S M E E R L R G T L H E T L K L - Q R L P W R K G - E G Q R C M K P - N F D S A F H G G K V E R . . . . . . 6420 TTTTGATAAGAAAGTAGAGTGGTTGTTGGTGAAGGGAGAAGAGAGGGATTTGTTGGTGGA F - - E S R V V V G E G R R E G F V G G F D K K V E W L L V K G E E R D L L V D V L I R K - S G C W - R E K R G I C W W . . . . . 6480 TAATAAAGGAAGAGTATTAGGAGTAGAAGAAGACATTGTATTGTGTT - - R K S I R S R R R H C I V N K G R V L G V E E D I V L C I I K E E Y - E - K K T L Y C V Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0336I24.1+_PGL-1_AGS-1_PPS_1 (4668 5102) (frame '1'; 432 bp, 144 residues) 1 HNINITKPHT IKLIKHKIWH HSHQLMKALT ILKLDLHTFN GYTFTTNFWN QSYRNCIFIF 61 QSNILQQFSY RQRKSNILNM IIIISMNMRQ ASITPRKLRL IKFFCIHSLV HVQKHIEPYI 121 LRIIICHFIE CQNLLLLIFL LCCP- >C08HBa0336I24.1+_PGL-1_AGS-1_PPS_2 (5862 6188) (frame '1'; 324 bp, 108 residues) 1 PQYPFVKVQV PSMERKEKPR EMNLQFFTTN FISTVTISTM NISLLFKPKR VKRVFIKFPH 61 STCSQLILGY VLLIRRMSRG ADAEFRHRRE LVVRNAIDII RYRRATTV- >C08HBa0336I24.1+_PGL-1_AGS-1_PPS_3 (5228 5425) (frame '0'; 195 bp, 65 residues) 1 NYAMEWALAR NRIPFFYYPN NHGLSRGKGY DFHRRKRIQS STNLYLINPF FSRQLISTRS 61 TSCPH- AGS-2 (6002 5757,5327 4927) SCR (e 1.000 d 0.000 a 0.000,e 0.984) Exon 1 6002 5757 ( 246 n); score: 1.000 Intron 1 5756 5328 ( 429 n); Pd: 0.000 Pa: 0.000 Exon 2 5327 4927 ( 401 n); score: 0.984 PGS (6002 5757,5327 4927) SGN-E347282+ 3-phase translation of AGS-2 (-strand): . . . . . . 6002 TTTAAACAACAAGCTAATATTCATTGTGCTTATTGTAACGGTGCTTATAAAATTGGTGGT F K Q Q A N I H C A Y C N G A Y K I G G L N N K L I F I V L I V T V L I K L V V - T T S - Y S L C L L - R C L - N W W . . . . . . 5942 AAAGAATTGCAAGTTCATTTCTCGTGGCTTTTCTTTCCGTTCCATAGATGGTACTTGTAC K E L Q V H F S W L F F P F H R W Y L Y K N C K F I S R G F S F R S I D G T C T - R I A S S F L V A F L S V P - M V L V . . . . . . 5882 TTTTACGAAAGGATATTGGGGTCACTTATTAATGATCCAACTTTTGCTTTACCTTACTGG F Y E R I L G S L I N D P T F A L P Y W F T K G Y W G H L L M I Q L L L Y L T G L L R K D I G V T Y - - S N F C F T L L . . . . . . 5822 AATTGGGATCATCCAAAAGGTATGCGTATACCTCCCATGTTTGATCGTGAGGGTTCATCT N W D H P K G M R I P P M F D R E G S S I G I I Q K V C V Y L P C L I V R V H L E L G S S K R Y A Y T S H V - S - G F I . : . . . . . 5762 CTTTAC : GATGAAAATCGTAACCCTTACCGCGTGAAAGTCCGTGATTGTTTGGATAGTAAA L Y : D E N R N P Y R V K V R D C L D S K F T : M K I V T L T A - K S V I V W I V K S L : R - K S - P L P R E S P - L F G - - . . . . . . 5273 AAAATGGGATTCGATTACGCGCCAATGCCCACTCCATGGCGTAATTTCAAACCAATCAGA K M G F D Y A P M P T P W R N F K P I R K W D S I T R Q C P L H G V I S N Q S E K N G I R L R A N A H S M A - F Q T N Q . . . . . . 5213 AGGTCATCATCAGGAAAAGTGAATACAGCGTCAATTGCACCAGTTAGCAAGGTGTTCCCA R S S S G K V N T A S I A P V S K V F P G H H Q E K - I Q R Q L H Q L A R C S H K V I I R K S E Y S V N C T S - Q G V P . . . . . . 5153 CTGGCCAAGCTGGACCGTGCGATTTCGTTCTCGATCACGCGGCCAGCTTCGTCAAGGACA L A K L D R A I S F S I T R P A S S R T W P S W T V R F R S R S R G Q L R Q G Q T G Q A G P C D F V L D H A A S F V K D . . . . . . 5093 ACACAAGAGAAAAATGAGCAGGAGGAGATTCTGACATTCAATAAAATGGCATATGATGAT T Q E K N E Q E E I L T F N K M A Y D D H K R K M S R R R F - H S I K W H M M I N T R E K - A G G D S D I Q - N G I - - . . . . . . 5033 ACGAAGTATGTAAGGTTCGATGTGTTTTTGAACGTGGACAAGACTGTGAATGCAGAAGAA T K Y V R F D V F L N V D K T V N A E E R S M - G S M C F - T W T R L - M Q K N Y E V C K V R C V F E R G Q D C E C R R . . . . . 4973 CTTGATAAGGCGGAGTTTGCGGGGAGTTATACTAGCTTGCCTCATGT L D K A E F A G S Y T S L P H L I R R S L R G V I L A C L M T - - G G V C G E L Y - L A S C Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0336I24.1-_PGL-1_AGS-2_PPS_1 (6002 5757,5327 4929) (frame '1'; 645 bp, 215 residues) 1 FKQQANIHCA YCNGAYKIGG KELQVHFSWL FFPFHRWYLY FYERILGSLI NDPTFALPYW 61 NWDHPKGMRI PPMFDREGSS LYDENRNPYR VKVRDCLDSK KMGFDYAPMP TPWRNFKPIR 121 RSSSGKVNTA SIAPVSKVFP LAKLDRAISF SITRPASSRT TQEKNEQEEI LTFNKMAYDD 181 TKYVRFDVFL NVDKTVNAEE LDKAEFAGSY TSLPH AGS-3 (5493 5212,5162 5034) SCR (e 1.000 d 0.000 a 0.000,e 1.000) Exon 1 5493 5212 ( 282 n); score: 1.000 Intron 1 5211 5163 ( 49 n); Pd: 0.000 Pa: 0.000 Exon 2 5162 5034 ( 129 n); score: 1.000 PGS (5493 5212,5162 5034) SGN-E313009+ 3-phase translation of AGS-3 (-strand): . . . . . . 5493 AGGACACGGTGAAGACATGGGTAATTTCTATTCAGCTGGTTTAGACCCGCTTTTCTACTG R T R - R H G - F L F S W F R P A F L L G H G E D M G N F Y S A G L D P L F Y C D T V K T W V I S I Q L V - T R F S T . . . . . . 5433 TCACCATGCTAATGTGGACAGGATGTGGAACGAGTGGAAATTAATTGGCGGGAAAAGAAG S P C - C G Q D V E R V E I N W R E K K H H A N V D R M W N E W K L I G G K R R V T M L M W T G C G T S G N - L A G K E . . . . . . 5373 GGATTTATCAAATAAAGATTGGTTGAACTCTGAATTCTTTTTCTACGATGAAAATCGTAA G F I K - R L V E L - I L F L R - K S - D L S N K D W L N S E F F F Y D E N R N G I Y Q I K I G - T L N S F S T M K I V . . . . . . 5313 CCCTTACCGCGTGAAAGTCCGTGATTGTTTGGATAGTAAAAAAATGGGATTCGATTACGC P L P R E S P - L F G - - K N G I R L R P Y R V K V R D C L D S K K M G F D Y A T L T A - K S V I V W I V K K W D S I T . . . . . : . 5253 GCCAATGCCCACTCCATGGCGTAATTTCAAACCAATCAGAAG : GTGTTCCCACTGGCCAAG A N A H S M A - F Q T N Q K : V F P L A K P M P T P W R N F K P I R R : C S H W P S R Q C P L H G V I S N Q S E : G V P T G Q . . . . . . 5144 CTGGACCGTGCGATTTCGTTCTCGATCACGCGGCCAGCTTCGTCAAGGACAACACAAGAG L D R A I S F S I T R P A S S R T T Q E W T V R F R S R S R G Q L R Q G Q H K R A G P C D F V L D H A A S F V K D N T R . . . . . . 5084 AAAAATGAGCAGGAGGAGATTCTGACATTCAATAAAATGGCATATGATGAT K N E Q E E I L T F N K M A Y D D K M S R R R F - H S I K W H M M E K - A G G D S D I Q - N G I - - Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0336I24.1-_PGL-1_AGS-3_PPS_1 (5492 5212,5162 5060) (frame '2'; 381 bp, 127 residues) 1 GHGEDMGNFY SAGLDPLFYC HHANVDRMWN EWKLIGGKRR DLSNKDWLNS EFFFYDENRN 61 PYRVKVRDCL DSKKMGFDYA PMPTPWRNFK PIRRCSHWPS WTVRFRSRSR GQLRQGQHKR 121 KMSRRRF- PGL 2 (+ strand): 11334 11654 AGS-1 (11334 11654) SCR (e 0.891) Exon 1 11334 11654 ( 321 n); score: 0.891 PGS (11334 11654) SGN-E540411+ PGS (11334 11640) SGN-E540411- 3-phase translation of AGS-1 (+strand): . . . . . . 11334 GGATAATTCCCAAGTACCCCCTCAACCTATGCCCGAAATCTCAGAGACACACTTATACTA G - F P S T P S T Y A R N L R D T L I L D N S Q V P P Q P M P E I S E T H L Y Y I I P K Y P L N L C P K S Q R H T Y T . . . . . . 11394 TACTAAGGTCCTATTACCCCCATGAACTTATATTATTAATAATTTTTTACCCCTTTTTAG Y - G P I T P M N L Y Y - - F F T P F - T K V L L P P - T Y I I N N F L P L F S I L R S Y Y P H E L I L L I I F Y P F L . . . . . . 11454 CCCACGTGGCACTATCTTGTGGGCCCAACGATGGTTGATTTTTTTGTTTCAAACTAGTGT P T W H Y L V G P T M V D F F V S N - C P R G T I L W A Q R W L I F L F Q T S V A H V A L S C G P N D G - F F C F K L V . . . . . . 11514 CGCGTAAGCTAAAAAGGGGTAGAGAATTACTTATAAAATAAGTTCAGGGGGTAATAGGAC R V S - K G V E N Y L - N K F R G - - D A - A K K G - R I T Y K I S S G G N R T S R K L K R G R E L L I K - V Q G V I G . . . . . . 11574 CTTAGTATAGTATAAGTGCGTCTCTGGGATTTCGGGCATAGGTTGAGGGGATACTTATGC L S I V - V R L W D F G H R L R G Y L C L V - Y K C V S G I S G I G - G D T Y A P - Y S I S A S L G F R A - V E G I L M . . . 11634 ATTACCCAAATTTATGATCAA I T Q I Y D Q L P K F M I H Y P N L - S Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (-strand): . . . . . . 11654 TTGATCATAAATTTGGGTAATGCATAAGTATCCCCTCAACCTATGCCCGAAATCCCAGAG L I I N L G N A - V S P Q P M P E I P E - S - I W V M H K Y P L N L C P K S Q R D H K F G - C I S I P S T Y A R N P R . . . . . . 11594 ACGCACTTATACTATACTAAGGTCCTATTACCCCCTGAACTTATTTTATAAGTAATTCTC T H L Y Y T K V L L P P E L I L - V I L R T Y T I L R S Y Y P L N L F Y K - F S D A L I L Y - G P I T P - T Y F I S N S . . . . . . 11534 TACCCCTTTTTAGCTTACGCGACACTAGTTTGAAACAAAAAAATCAACCATCGTTGGGCC Y P F L A Y A T L V - N K K I N H R W A T P F - L T R H - F E T K K S T I V G P L P L F S L R D T S L K Q K N Q P S L G . . . . . . 11474 CACAAGATAGTGCCACGTGGGCTAAAAAGGGGTAAAAAATTATTAATAATATAAGTTCAT H K I V P R G L K R G K K L L I I - V H T R - C H V G - K G V K N Y - - Y K F M P Q D S A T W A K K G - K I I N N I S S . . . . . . 11414 GGGGGTAATAGGACCTTAGTATAGTATAAGTGTGTCTCTGAGATTTCGGGCATAGGTTGA G G N R T L V - Y K C V S E I S G I G - G V I G P - Y S I S V S L R F R A - V E W G - - D L S I V - V C L - D F G H R L . . . 11354 GGGGGTACTTGGGAATTATCC G G T W E L S G V L G N Y R G Y L G I I Maximal non-overlapping open reading frames (>= 64 codons): none PGL 3 (+ strand): 14983 16946 AGS-1 (14983 16946) SCR (e 1.000) Exon 1 14983 16946 (1964 n); score: 1.000 PGS (14983 15437) SGN-E227346+ PGS (15012 15292) SGN-E225303+ PGS (15021 15404) SGN-E225510+ PGS (15041 15620) SGN-E279519+ PGS (15049 15253) SGN-E222668+ PGS (15093 15725) SGN-E320453+ PGS (15093 15707) SGN-E317782+ PGS (15093 15647) SGN-E378013+ PGS (15093 15647) SGN-E378012- PGS (15093 15613) SGN-E396266+ PGS (15093 15608) SGN-E342182- PGS (15093 15483) SGN-E203308+ PGS (15093 15481) SGN-E241713+ PGS (15093 15481) SGN-E229636+ PGS (15093 15467) SGN-E231932+ PGS (15093 15438) SGN-E216655+ PGS (15093 15385) SGN-E239647+ PGS (15093 15385) SGN-E221730+ PGS (15100 15760) SGN-E326202- PGS (15172 15561) SGN-E317625- PGS (15177 15648) SGN-E390549- PGS (15226 15754) SGN-E236547- PGS (15259 15608) SGN-E336881- PGS (15288 15844) SGN-E317358- PGS (15313 15731) SGN-E216715- PGS (15526 16166) SGN-E242875- PGS (15538 16017) SGN-E323261- PGS (15549 15948) SGN-E319717- PGS (15577 15942) SGN-E290525- PGS (15589 16166) SGN-E241903- PGS (15600 16239) SGN-E322245- PGS (15628 15941) SGN-E290521- PGS (15642 16359) SGN-E326236- PGS (15670 16419) SGN-E334025- PGS (15688 16166) SGN-E243580- PGS (15735 16307) SGN-E313577- PGS (15971 16669) SGN-E314781- PGS (15976 16682) SGN-E340679- PGS (15979 16518) SGN-E321823- PGS (16003 16748) SGN-E314333- PGS (16038 16607) SGN-E326293- PGS (16042 16616) SGN-E313171- PGS (16126 16830) SGN-E317072- PGS (16133 16932) SGN-E329108- PGS (16136 16922) SGN-E316553- PGS (16136 16892) SGN-E315871- PGS (16139 16932) SGN-E328643- PGS (16140 16669) SGN-E314737- PGS (16145 16904) SGN-E315745- PGS (16146 16927) SGN-E315354- PGS (16149 16892) SGN-E327936- PGS (16152 16929) SGN-E315203- PGS (16158 16939) SGN-E327650- PGS (16158 16937) SGN-E322844- PGS (16158 16911) SGN-E320579- PGS (16168 16941) SGN-E316597- PGS (16178 16939) SGN-E319980- PGS (16178 16927) SGN-E328939- PGS (16178 16904) SGN-E315843- PGS (16183 16934) SGN-E315180- PGS (16184 16559) SGN-E326412- PGS (16185 16938) SGN-E317780- PGS (16201 16931) SGN-E318091- PGS (16203 16927) SGN-E329018- PGS (16203 16922) SGN-E316433- PGS (16213 16920) SGN-E314991- PGS (16216 16934) SGN-E339959- PGS (16217 16932) SGN-E317913- PGS (16218 16933) SGN-E326071- PGS (16241 16934) SGN-E320020- PGS (16241 16895) SGN-E315584- PGS (16241 16807) SGN-E316925- PGS (16247 16871) SGN-E318205- PGS (16248 16937) SGN-E346609- PGS (16248 16934) SGN-E326119- PGS (16248 16934) SGN-E343367- PGS (16248 16933) SGN-E317091- PGS (16248 16932) SGN-E317449- PGS (16248 16918) SGN-E318179- PGS (16250 16933) SGN-E316169- PGS (16251 16943) SGN-E323178- PGS (16251 16931) SGN-E328019- PGS (16251 16929) SGN-E334447- PGS (16251 16929) SGN-E334547- PGS (16256 16931) SGN-E314873- PGS (16258 16934) SGN-E326499- PGS (16260 16933) SGN-E316082- PGS (16261 16946) SGN-E328506- PGS (16273 16933) SGN-E313146- PGS (16301 16934) SGN-E312861- PGS (16323 16941) SGN-E325586- PGS (16330 16934) SGN-E325657- PGS (16331 16933) SGN-E317269- PGS (16332 16934) SGN-E312222- PGS (16335 16904) SGN-E313163- PGS (16342 16830) SGN-E316976- PGS (16344 16924) SGN-E325836- PGS (16345 16934) SGN-E314459- PGS (16345 16892) SGN-E327214- PGS (16351 16930) SGN-E324317- PGS (16373 16933) SGN-E311992- PGS (16373 16928) SGN-E310420- PGS (16381 16929) SGN-E316163- PGS (16394 16934) SGN-E312364- PGS (16394 16928) SGN-E324320- PGS (16394 16913) SGN-E203001- PGS (16394 16904) SGN-E326254- PGS (16396 16932) SGN-E330100- PGS (16396 16931) SGN-E313259- PGS (16403 16941) SGN-E319697- PGS (16403 16934) SGN-E347000- PGS (16403 16932) SGN-E324204- PGS (16403 16911) SGN-E330745- PGS (16403 16853) SGN-E317244- PGS (16405 16937) SGN-E321227- PGS (16405 16934) SGN-E324624- PGS (16405 16929) SGN-E312738- PGS (16405 16904) SGN-E313833- PGS (16405 16898) SGN-E326256- PGS (16410 16934) SGN-E312803- PGS (16410 16911) SGN-E330622- PGS (16414 16932) SGN-E328761- PGS (16417 16911) SGN-E320580- PGS (16429 16814) SGN-E202925- PGS (16438 16934) SGN-E325113- PGS (16452 16929) SGN-E324169- PGS (16452 16904) SGN-E311881- PGS (16452 16899) SGN-E323529- PGS (16464 16934) SGN-E313751- PGS (16465 16931) SGN-E319313- PGS (16465 16899) SGN-E312841- PGS (16468 16942) SGN-E313746- PGS (16494 16929) SGN-E311565- PGS (16505 16939) SGN-E311538- PGS (16505 16934) SGN-E313063- PGS (16505 16924) SGN-E324882- PGS (16506 16929) SGN-E313346- PGS (16506 16921) SGN-E326402- PGS (16507 16876) SGN-E325498- PGS (16514 16927) SGN-E335708- PGS (16514 16917) SGN-E331180- PGS (16515 16920) SGN-E337083- PGS (16521 16943) SGN-E320713- PGS (16544 16898) SGN-E317525- PGS (16567 16941) SGN-E325560- PGS (16644 16913) SGN-E281487- PGS (16660 16845) SGN-E289925- PGS (16687 16944) SGN-E281327- 3-phase translation of AGS-1 (+strand): . . . . . . 14983 ATTAGAATGACAAAAAATGATATAAAACTGAATGGAAGACAACCATTTATTTATTTCATA I R M T K N D I K L N G R Q P F I Y F I L E - Q K M I - N - M E D N H L F I S Y - N D K K - Y K T E W K T T I Y L F H . . . . . . 15043 CATAGCATTAACACAACTAGCAATCAGCTATCGATCGAGCTGATACATTTTAACATAAAA H S I N T T S N Q L S I E L I H F N I K I A L T Q L A I S Y R S S - Y I L T - N T - H - H N - Q S A I D R A D T F - H K . . . . . . 15103 CATAACTCAAACCACACATAATTATACTAATTAAACATAAAATTTGGCACCATAGCCACC H N S N H T - L Y - L N I K F G T I A T I T Q T T H N Y T N - T - N L A P - P P T - L K P H I I I L I K H K I W H H S H . . . . . . 15163 AACTCATGCAGACTTTAACAATCCTCAAGCTTGATCTCCACACTTTCAATGGACACTTCT N S C R L - Q S S S L I S T L S M D T S T H A D F N N P Q A - S P H F Q W T L L Q L M Q T L T I L K L D L H T F N G H F . . . . . . 15223 TCACCGCCAGCTTTTGGAACCAAAGTCACCGCAATAGTATCTTCATCTTCCAATCCAATA S P P A F G T K V T A I V S S S S N P I H R Q L L E P K S P Q - Y L H L P I Q Y F T A S F W N Q S H R N S I F I F Q S N . . . . . . 15283 TCCTCCAACAGTTCAGTTATCGCCAGCTTGAAAGTAACACTGGTAACATGATTAGTATTA S S N S S V I A S L K V T L V T - L V L P P T V Q L S P A - K - H W - H D - Y Y I L Q Q F S Y R Q L E S N T G N M I S I . . . . . . 15343 CTTCCATGAACATGCGGCAAGCTAGTATAACTCCCTGCAAACTCCGCCTTATCAAGCTCA L P - T C G K L V - L P A N S A L S S S F H E H A A S - Y N S L Q T P P Y Q A H T S M N M R Q A S I T P C K L R L I K L . . . . . . 15403 TCTGCATTCACAGTCTTGTCCACGTTCAGAAACACATCGAACCTTACATAGTTCCTATCA S A F T V L S T F R N T S N L T - F L S L H S Q S C P R S E T H R T L H S S Y H I C I H S L V H V Q K H I E P Y I V P I . . . . . . 15463 TCATACGATATTTTATTGAATGTCAGTATCTCCTCTTGCTCATTTTTCTCTTGTGTTGTC S Y D I L L N V S I S S C S F F S C V V H T I F Y - M S V S P L A H F S L V L S I I R Y F I E C Q Y L L L L I F L L C C . . . . . . 15523 CTTGACGAGGCTGGCCGCGTGATAGAGAACGAAATCGCACGGTCCAGCTTCGCCAATGGG L D E A G R V I E N E I A R S S F A N G L T R L A A - - R T K S H G P A S P M G P - R G W P R D R E R N R T V Q L R Q W . . . . . . 15583 AACACCTTGCTAACTGGTGCAATTGACGCTGTATTCACTTTTCCTGATGATGACTTTCTG N T L L T G A I D A V F T F P D D D F L T P C - L V Q L T L Y S L F L M M T F - E H L A N W C N - R C I H F S - - - L S . . . . . . 15643 ATTGGTTTAAAATTACGCCATGGAGTGGGCATTGGCGCGTAATCGAATCCCATTTTTTTA I G L K L R H G V G I G A - S N P I F L L V - N Y A M E W A L A R N R I P F F Y D W F K I T P W S G H W R V I E S H F F . . . . . . 15703 CTGTCCAAACAGTCACGGACTTTCACACGGTAAGGGTTACGATTTTCATCGTAGAAAAAG L S K Q S R T F T R - G L R F S S - K K C P N S H G L S H G K G Y D F H R R K R T V Q T V T D F H T V R V T I F I V E K . . . . . . 15763 AATTCAGAGTTCAACCAATCTTTATCTGTTAAATCCCTTCTTTTCCCGCCAATTAATTTC N S E F N Q S L S V K S L L F P P I N F I Q S S T N L Y L L N P F F S R Q L I S E F R V Q P I F I C - I P S F P A N - F . . . . . . 15823 CATTCATTCCACATCCTGTCCACATTGGCATGGTGGCAGTAAAAAATCGGATCTAAACCG H S F H I L S T L A W W Q - K I G S K P I H S T S C P H W H G G S K K S D L N R P F I P H P V H I G M V A V K N R I - T . . . . . . 15883 GCTGAGTAGAAATTACCCATGTCTTCACCGTTTTTTTGACGAGGTTTGTCACCGGTCCAG A E - K L P M S S P F F - R G L S P V Q L S R N Y P C L H R F F D E V C H R S R G - V E I T H V F T V F L T R F V T G P . . . . . . 15943 ATGTGAACCGGAGTATGAGGGATGTTTTCAATAGTACCCTGACCCGGACTTGGTTCAGAA M - T G V - G M F S I V P - P G L G S E C E P E Y E G C F Q - Y P D P D L V Q N D V N R S M R D V F N S T L T R T W F R . . . . . . 16003 CCCAGAGGGTAAGCAGCACCGAAGAATTGGGAAGGGCAAGGAGCATTAGTAACCATTTGA P R G - A A P K N W E G Q G A L V T I - P E G K Q H R R I G K G K E H - - P F D T Q R V S S T E E L G R A R S I S N H L . . . . . . 16063 CGGTACATTAGGGTTAAATTATTAGTCATTATCTGTAGCTGAGGTGTGTCAACTTCCTTA R Y I R V K L L V I I C S - G V S T S L G T L G L N Y - S L S V A E V C Q L P Y T V H - G - I I S H Y L - L R C V N F L . . . . . . 16123 CCAAAATGACCAAGATCAATAATAGTTCCATTGCGATGATTTTGGTTACGTTTCTCATCG P K - P R S I I V P L R - F W L R F S S Q N D Q D Q - - F H C D D F G Y V S H R T K M T K I N N S S I A M I L V T F L I . . . . . . 16183 TAAAGAGATGATCCCTCACGATCAAACATGGGAGGTATACGCATGCCTTTTGGATGATCC - R D D P S R S N M G G I R M P F G - S K E M I P H D Q T W E V Y A C L L D D P V K R - S L T I K H G R Y T H A F W M I . . . . . . 16243 CAATTCCAGTAAGGTAAAGCAAAAGTTGGATCATTAATAAGTGATCCCAAAATTCTTTCG Q F Q - G K A K V G S L I S D P K I L S N S S K V K Q K L D H - - V I P K F F R P I P V R - S K S W I I N K - S Q N S F . . . . . . 16303 TAAAAGTACAAGTACCATCTATGAAAGGGAAAGAAAAGCCACGAGAAATGAACTTGCAAT - K Y K Y H L - K G K K S H E K - T C N K S T S T I Y E R E R K A T R N E L A I V K V Q V P S M K G K E K P R E M N L Q . . . . . . 16363 TCTTTACCACCAACTTTGTAAGCACCGTTGCAATAAGCACAATGAATATTAGCTTGTTGT S L P P T L - A P L Q - A Q - I L A C C L Y H Q L C K H R C N K H N E Y - L V V F F T T N F V S T V A I S T M N I S L L . . . . . . 16423 TTAAAGCCAAGAGGGTCAAAGGGGTCTTTATCAAGTTCCCTCATTCGACTCGTAGCCAAT L K P R G S K G S L S S S L I R L V A N - S Q E G Q R G L Y Q V P S F D S - P I F K A K R V K G V F I K F P H S T R S Q . . . . . . 16483 TGATACTTGGCTACGTACTCCTCATCCGCCGCATGAGCAGGGGGGCGGATGCGGAGTTTA - Y L A T Y S S S A A - A G G R M R S L D T W L R T P H P P H E Q G G G C G V - L I L G Y V L L I R R M S R G A D A E F . . . . . . 16543 GTCATAGAAGGGAACTTGTAGTACGGAACACTATCGATATCATCGGGTACAGGAGGGCAA V I E G N L - Y G T L S I S S G T G G Q S - K G T C S T E H Y R Y H R V Q E G N S H R R E L V V R N T I D I I G Y R R A . . . . . . 16603 CAACTGTATATTACATCAACACCTTCTTTTACATGGGCAGTACCACAAGACTTGAGATCA Q L Y I T S T P S F T W A V P Q D L R S N C I L H Q H L L L H G Q Y H K T - D Q T T V Y Y I N T F F Y M G S T T R L E I . . . . . . 16663 GGAGGTGGTATAGGTGCAGCAGTCGCTAATGGTGCAAGATTAGCTGCACCATAAAGACCT G G G I G A A V A N G A R L A A P - R P E V V - V Q Q S L M V Q D - L H H K D L R R W Y R C S S R - W C K I S C T I K T . . . . . . 16723 CCTAACCCTAAAAGAACGTTTCGTCTATCAACAGCGTCAGGGTTTTTGTCAACGTTGTTT P N P K R T F R L S T A S G F L S T L F L T L K E R F V Y Q Q R Q G F C Q R C L S - P - K N V S S I N S V R V F V N V V . . . . . . 16783 GCGTTGCATGAAACCTTGAAACTTTGATTACGCCTTCCGTGGAGGAAAAGTTGAGAGGGT A L H E T L K L - L R L P W R K S - E G R C M K P - N F D Y A F R G G K V E R V C V A - N L E T L I T P S V E E K L R G . . . . . . 16843 TTTGATAACAAGGATGAGTTGGTGGTGGTGAAGGAAGAAGAGAGGGATTTGTTGGTGCAT F D N K D E L V V V K E E E R D L L V H L I T R M S W W W - R K K R G I C W C I F - - Q G - V G G G E G R R E G F V G A . . . . . 16903 AAAGGAAGAGTAGTAGTAATAGAAGAAGAAGAAGACATTGTGTT K G R V V V I E E E E D I V K E E - - - - K K K K T L C - R K S S S N R R R R R H C V Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0336I24.1+_PGL-3_AGS-1_PPS_1 (15108 15527) (frame '0'; 417 bp, 139 residues) 1 LKPHIIILIK HKIWHHSHQL MQTLTILKLD LHTFNGHFFT ASFWNQSHRN SIFIFQSNIL 61 QQFSYRQLES NTGNMISITS MNMRQASITP CKLRLIKLIC IHSLVHVQKH IEPYIVPIII 121 RYFIECQYLL LLIFLLCCP- >C08HBa0336I24.1+_PGL-3_AGS-1_PPS_2 (16287 16691) (frame '0'; 402 bp, 134 residues) 1 SQNSFVKVQV PSMKGKEKPR EMNLQFFTTN FVSTVAISTM NISLLFKAKR VKGVFIKFPH 61 STRSQLILGY VLLIRRMSRG ADAEFSHRRE LVVRNTIDII GYRRATTVYY INTFFYMGST 121 TRLEIRRWYR CSSR- >C08HBa0336I24.1+_PGL-3_AGS-1_PPS_3 (15653 15976) (frame '2'; 321 bp, 107 residues) 1 NYAMEWALAR NRIPFFYCPN SHGLSHGKGY DFHRRKRIQS STNLYLLNPF FSRQLISIHS 61 TSCPHWHGGS KKSDLNRLSR NYPCLHRFFD EVCHRSRCEP EYEGCFQ- 3-phase translation of AGS-1 (-strand): . . . . . . 16946 AACACAATGTCTTCTTCTTCTTCTATTACTACTACTCTTCCTTTATGCACCAACAAATCC N T M S S S S S I T T T L P L C T N K S T Q C L L L L L L L L L F L Y A P T N P H N V F F F F Y Y Y Y S S F M H Q Q I . . . . . . 16886 CTCTCTTCTTCCTTCACCACCACCAACTCATCCTTGTTATCAAAACCCTCTCAACTTTTC L S S S F T T T N S S L L S K P S Q L F S L L P S P P P T H P C Y Q N P L N F S P L F F L H H H Q L I L V I K T L S T F . . . . . . 16826 CTCCACGGAAGGCGTAATCAAAGTTTCAAGGTTTCATGCAACGCAAACAACGTTGACAAA L H G R R N Q S F K V S C N A N N V D K S T E G V I K V S R F H A T Q T T L T K P P R K A - S K F Q G F M Q R K Q R - Q . . . . . . 16766 AACCCTGACGCTGTTGATAGACGAAACGTTCTTTTAGGGTTAGGAGGTCTTTATGGTGCA N P D A V D R R N V L L G L G G L Y G A T L T L L I D E T F F - G - E V F M V Q K P - R C - - T K R S F R V R R S L W C . . . . . . 16706 GCTAATCTTGCACCATTAGCGACTGCTGCACCTATACCACCTCCTGATCTCAAGTCTTGT A N L A P L A T A A P I P P P D L K S C L I L H H - R L L H L Y H L L I S S L V S - S C T I S D C C T Y T T S - S Q V L . . . . . . 16646 GGTACTGCCCATGTAAAAGAAGGTGTTGATGTAATATACAGTTGTTGCCCTCCTGTACCC G T A H V K E G V D V I Y S C C P P V P V L P M - K K V L M - Y T V V A L L Y P W Y C P C K R R C - C N I Q L L P S C T . . . . . . 16586 GATGATATCGATAGTGTTCCGTACTACAAGTTCCCTTCTATGACTAAACTCCGCATCCGC D D I D S V P Y Y K F P S M T K L R I R M I S I V F R T T S S L L - L N S A S A R - Y R - C S V L Q V P F Y D - T P H P . . . . . . 16526 CCCCCTGCTCATGCGGCGGATGAGGAGTACGTAGCCAAGTATCAATTGGCTACGAGTCGA P P A H A A D E E Y V A K Y Q L A T S R P L L M R R M R S T - P S I N W L R V E P P C S C G G - G V R S Q V S I G Y E S . . . . . . 16466 ATGAGGGAACTTGATAAAGACCCCTTTGACCCTCTTGGCTTTAAACAACAAGCTAATATT M R E L D K D P F D P L G F K Q Q A N I - G N L I K T P L T L L A L N N K L I F N E G T - - R P L - P S W L - T T S - Y . . . . . . 16406 CATTGTGCTTATTGCAACGGTGCTTACAAAGTTGGTGGTAAAGAATTGCAAGTTCATTTC H C A Y C N G A Y K V G G K E L Q V H F I V L I A T V L T K L V V K N C K F I S S L C L L Q R C L Q S W W - R I A S S F . . . . . . 16346 TCGTGGCTTTTCTTTCCCTTTCATAGATGGTACTTGTACTTTTACGAAAGAATTTTGGGA S W L F F P F H R W Y L Y F Y E R I L G R G F S F P F I D G T C T F T K E F W D L V A F L S L S - M V L V L L R K N F G . . . . . . 16286 TCACTTATTAATGATCCAACTTTTGCTTTACCTTACTGGAATTGGGATCATCCAAAAGGC S L I N D P T F A L P Y W N W D H P K G H L L M I Q L L L Y L T G I G I I Q K A I T Y - - S N F C F T L L E L G S S K R . . . . . . 16226 ATGCGTATACCTCCCATGTTTGATCGTGAGGGATCATCTCTTTACGATGAGAAACGTAAC M R I P P M F D R E G S S L Y D E K R N C V Y L P C L I V R D H L F T M R N V T H A Y T S H V - S - G I I S L R - E T - . . . . . . 16166 CAAAATCATCGCAATGGAACTATTATTGATCTTGGTCATTTTGGTAAGGAAGTTGACACA Q N H R N G T I I D L G H F G K E V D T K I I A M E L L L I L V I L V R K L T H P K S S Q W N Y Y - S W S F W - G S - H . . . . . . 16106 CCTCAGCTACAGATAATGACTAATAATTTAACCCTAATGTACCGTCAAATGGTTACTAAT P Q L Q I M T N N L T L M Y R Q M V T N L S Y R - - L I I - P - C T V K W L L M T S A T D N D - - F N P N V P S N G Y - . . . . . . 16046 GCTCCTTGCCCTTCCCAATTCTTCGGTGCTGCTTACCCTCTGGGTTCTGAACCAAGTCCG A P C P S Q F F G A A Y P L G S E P S P L L A L P N S S V L L T L W V L N Q V R C S L P F P I L R C C L P S G F - T K S . . . . . . 15986 GGTCAGGGTACTATTGAAAACATCCCTCATACTCCGGTTCACATCTGGACCGGTGACAAA G Q G T I E N I P H T P V H I W T G D K V R V L L K T S L I L R F T S G P V T N G S G Y Y - K H P S Y S G S H L D R - Q . . . . . . 15926 CCTCGTCAAAAAAACGGTGAAGACATGGGTAATTTCTACTCAGCCGGTTTAGATCCGATT P R Q K N G E D M G N F Y S A G L D P I L V K K T V K T W V I S T Q P V - I R F T S S K K R - R H G - F L L S R F R S D . . . . . . 15866 TTTTACTGCCACCATGCCAATGTGGACAGGATGTGGAATGAATGGAAATTAATTGGCGGG F Y C H H A N V D R M W N E W K L I G G F T A T M P M W T G C G M N G N - L A G F L L P P C Q C G Q D V E - M E I N W R . . . . . . 15806 AAAAGAAGGGATTTAACAGATAAAGATTGGTTGAACTCTGAATTCTTTTTCTACGATGAA K R R D L T D K D W L N S E F F F Y D E K E G I - Q I K I G - T L N S F S T M K E K K G F N R - R L V E L - I L F L R - . . . . . . 15746 AATCGTAACCCTTACCGTGTGAAAGTCCGTGACTGTTTGGACAGTAAAAAAATGGGATTC N R N P Y R V K V R D C L D S K K M G F I V T L T V - K S V T V W T V K K W D S K S - P L P C E S P - L F G Q - K N G I . . . . . . 15686 GATTACGCGCCAATGCCCACTCCATGGCGTAATTTTAAACCAATCAGAAAGTCATCATCA D Y A P M P T P W R N F K P I R K S S S I T R Q C P L H G V I L N Q S E S H H Q R L R A N A H S M A - F - T N Q K V I I . . . . . . 15626 GGAAAAGTGAATACAGCGTCAATTGCACCAGTTAGCAAGGTGTTCCCATTGGCGAAGCTG G K V N T A S I A P V S K V F P L A K L E K - I Q R Q L H Q L A R C S H W R S W R K S E Y S V N C T S - Q G V P I G E A . . . . . . 15566 GACCGTGCGATTTCGTTCTCTATCACGCGGCCAGCCTCGTCAAGGACAACACAAGAGAAA D R A I S F S I T R P A S S R T T Q E K T V R F R S L S R G Q P R Q G Q H K R K G P C D F V L Y H A A S L V K D N T R E . . . . . . 15506 AATGAGCAAGAGGAGATACTGACATTCAATAAAATATCGTATGATGATAGGAACTATGTA N E Q E E I L T F N K I S Y D D R N Y V M S K R R Y - H S I K Y R M M I G T M - K - A R G D T D I Q - N I V - - - E L C . . . . . . 15446 AGGTTCGATGTGTTTCTGAACGTGGACAAGACTGTGAATGCAGATGAGCTTGATAAGGCG R F D V F L N V D K T V N A D E L D K A G S M C F - T W T R L - M Q M S L I R R K V R C V S E R G Q D C E C R - A - - G . . . . . . 15386 GAGTTTGCAGGGAGTTATACTAGCTTGCCGCATGTTCATGGAAGTAATACTAATCATGTT E F A G S Y T S L P H V H G S N T N H V S L Q G V I L A C R M F M E V I L I M L G V C R E L Y - L A A C S W K - Y - S C . . . . . . 15326 ACCAGTGTTACTTTCAAGCTGGCGATAACTGAACTGTTGGAGGATATTGGATTGGAAGAT T S V T F K L A I T E L L E D I G L E D P V L L S S W R - L N C W R I L D W K M Y Q C Y F Q A G D N - T V G G Y W I G R . . . . . . 15266 GAAGATACTATTGCGGTGACTTTGGTTCCAAAAGCTGGCGGTGAAGAAGTGTCCATTGAA E D T I A V T L V P K A G G E E V S I E K I L L R - L W F Q K L A V K K C P L K - R Y Y C G D F G S K S W R - R S V H - . . . . . . 15206 AGTGTGGAGATCAAGCTTGAGGATTGTTAAAGTCTGCATGAGTTGGTGGCTATGGTGCCA S V E I K L E D C - S L H E L V A M V P V W R S S L R I V K V C M S W W L W C Q K C G D Q A - G L L K S A - V G G Y G A . . . . . . 15146 AATTTTATGTTTAATTAGTATAATTATGTGTGGTTTGAGTTATGTTTTATGTTAAAATGT N F M F N - Y N Y V W F E L C F M L K C I L C L I S I I M C G L S Y V L C - N V K F Y V - L V - L C V V - V M F Y V K M . . . . . . 15086 ATCAGCTCGATCGATAGCTGATTGCTAGTTGTGTTAATGCTATGTATGAAATAAATAAAT I S S I D S - L L V V L M L C M K - I N S A R S I A D C - L C - C Y V - N K - M Y Q L D R - L I A S C V N A M Y E I N K . . . . . 15026 GGTTGTCTTCCATTCAGTTTTATATCATTTTTTGTCATTCTAAT G C L P F S F I S F F V I L V V F H S V L Y H F L S F - W L S S I Q F Y I I F C H S N Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0336I24.1-_PGL-3_AGS-1_PPS_1 (16946 15177) (frame '1'; 1767 bp, 589 residues) 1 NTMSSSSSIT TTLPLCTNKS LSSSFTTTNS SLLSKPSQLF LHGRRNQSFK VSCNANNVDK 61 NPDAVDRRNV LLGLGGLYGA ANLAPLATAA PIPPPDLKSC GTAHVKEGVD VIYSCCPPVP 121 DDIDSVPYYK FPSMTKLRIR PPAHAADEEY VAKYQLATSR MRELDKDPFD PLGFKQQANI 181 HCAYCNGAYK VGGKELQVHF SWLFFPFHRW YLYFYERILG SLINDPTFAL PYWNWDHPKG 241 MRIPPMFDRE GSSLYDEKRN QNHRNGTIID LGHFGKEVDT PQLQIMTNNL TLMYRQMVTN 301 APCPSQFFGA AYPLGSEPSP GQGTIENIPH TPVHIWTGDK PRQKNGEDMG NFYSAGLDPI 361 FYCHHANVDR MWNEWKLIGG KRRDLTDKDW LNSEFFFYDE NRNPYRVKVR DCLDSKKMGF 421 DYAPMPTPWR NFKPIRKSSS GKVNTASIAP VSKVFPLAKL DRAISFSITR PASSRTTQEK 481 NEQEEILTFN KISYDDRNYV RFDVFLNVDK TVNADELDKA EFAGSYTSLP HVHGSNTNHV 541 TSVTFKLAIT ELLEDIGLED EDTIAVTLVP KAGGEEVSIE SVEIKLEDC- AGS-2 (15352 15758,16188 16427) SCR (e 0.928 d 0.000 a 0.151,e 0.958) Exon 1 15352 15758 ( 407 n); score: 0.928 Intron 1 15759 16187 ( 429 n); Pd: 0.000 Pa: 0.151 Exon 2 16188 16427 ( 240 n); score: 0.958 PGS (15352 15758,16188 16427) SGN-E347282- 3-phase translation of AGS-2 (+strand): . . . . . . 15352 ACATGCGGCAAGCTAGTATAACTCCCTGCAAACTCCGCCTTATCAAGCTCATCTGCATTC T C G K L V - L P A N S A L S S S S A F H A A S - Y N S L Q T P P Y Q A H L H S M R Q A S I T P C K L R L I K L I C I . . . . . . 15412 ACAGTCTTGTCCACGTTCAGAAACACATCGAACCTTACATAGTTCCTATCATCATACGAT T V L S T F R N T S N L T - F L S S Y D Q S C P R S E T H R T L H S S Y H H T I H S L V H V Q K H I E P Y I V P I I I R . . . . . . 15472 ATTTTATTGAATGTCAGTATCTCCTCTTGCTCATTTTTCTCTTGTGTTGTCCTTGACGAG I L L N V S I S S C S F F S C V V L D E F Y - M S V S P L A H F S L V L S L T R Y F I E C Q Y L L L L I F L L C C P - R . . . . . . 15532 GCTGGCCGCGTGATAGAGAACGAAATCGCACGGTCCAGCTTCGCCAATGGGAACACCTTG A G R V I E N E I A R S S F A N G N T L L A A - - R T K S H G P A S P M G T P C G W P R D R E R N R T V Q L R Q W E H L . . . . . . 15592 CTAACTGGTGCAATTGACGCTGTATTCACTTTTCCTGATGATGACTTTCTGATTGGTTTA L T G A I D A V F T F P D D D F L I G L - L V Q L T L Y S L F L M M T F - L V - A N W C N - R C I H F S - - - L S D W F . . . . . . 15652 AAATTACGCCATGGAGTGGGCATTGGCGCGTAATCGAATCCCATTTTTTTACTGTCCAAA K L R H G V G I G A - S N P I F L L S K N Y A M E W A L A R N R I P F F Y C P N K I T P W S G H W R V I E S H F F T V Q . . . . . : . 15712 CAGTCACGGACTTTCACACGGTAAGGGTTACGATTTTCATCGTAGAA : AGATGATCCCTCA Q S R T F T R - G L R F S S - K : D D P S S H G L S H G K G Y D F H R R : K M I P H T V T D F H T V R V T I F I V E : R - S L . . . . . . 16201 CGATCAAACATGGGAGGTATACGCATGCCTTTTGGATGATCCCAATTCCAGTAAGGTAAA R S N M G G I R M P F G - S Q F Q - G K D Q T W E V Y A C L L D D P N S S K V K T I K H G R Y T H A F W M I P I P V R - . . . . . . 16261 GCAAAAGTTGGATCATTAATAAGTGATCCCAAAATTCTTTCGTAAAAGTACAAGTACCAT A K V G S L I S D P K I L S - K Y K Y H Q K L D H - - V I P K F F R K S T S T I S K S W I I N K - S Q N S F V K V Q V P . . . . . . 16321 CTATGAAAGGGAAAGAAAAGCCACGAGAAATGAACTTGCAATTCTTTACCACCAACTTTG L - K G K K S H E K - T C N S L P P T L Y E R E R K A T R N E L A I L Y H Q L C S M K G K E K P R E M N L Q F F T T N F . . . . . 16381 TAAGCACCGTTGCAATAAGCACAATGAATATTAGCTTGTTGTTTAAA - A P L Q - A Q - I L A C C L K H R C N K H N E Y - L V V - V S T V A I S T M N I S L L F K Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0336I24.1+_PGL-3_AGS-2_PPS_1 (15454 15684) (frame '1'; 228 bp, 76 residues) 1 FLSSYDILLN VSISSCSFFS CVVLDEAGRV IENEIARSSF ANGNTLLTGA IDAVFTFPDD 61 DFLIGLKLRH GVGIGA- >C08HBa0336I24.1+_PGL-3_AGS-2_PPS_2 (15653 15758,16188 16279) (frame '2'; 195 bp, 65 residues) 1 NYAMEWALAR NRIPFFYCPN SHGLSHGKGY DFHRRKMIPH DQTWEVYACL LDDPNSSKVK 61 QKLDH- AGS-3 (15459 15590,15640 15913) SCR (e 0.932 d 0.000 a 0.000,e 0.945) Exon 1 15459 15590 ( 132 n); score: 0.932 Intron 1 15591 15639 ( 49 n); Pd: 0.000 Pa: 0.000 Exon 2 15640 15913 ( 274 n); score: 0.945 PGS (15459 15590,15640 15913) SGN-E313009- 3-phase translation of AGS-3 (+strand): . . . . . . 15459 ATCATCATACGATATTTTATTGAATGTCAGTATCTCCTCTTGCTCATTTTTCTCTTGTGT I I I R Y F I E C Q Y L L L L I F L L C S S Y D I L L N V S I S S C S F F S C V H H T I F Y - M S V S P L A H F S L V . . . . . . 15519 TGTCCTTGACGAGGCTGGCCGCGTGATAGAGAACGAAATCGCACGGTCCAGCTTCGCCAA C P - R G W P R D R E R N R T V Q L R Q V L D E A G R V I E N E I A R S S F A N L S L T R L A A - - R T K S H G P A S P . . : . . . . 15579 TGGGAACACCTT : CTGATTGGTTTAAAATTACGCCATGGAGTGGGCATTGGCGCGTAATCG W E H L : L I G L K L R H G V G I G A - S G N T F : - L V - N Y A M E W A L A R N R M G T P : S D W F K I T P W S G H W R V I . . . . . . 15688 AATCCCATTTTTTTACTGTCCAAACAGTCACGGACTTTCACACGGTAAGGGTTACGATTT N P I F L L S K Q S R T F T R - G L R F I P F F Y C P N S H G L S H G K G Y D F E S H F F T V Q T V T D F H T V R V T I . . . . . . 15748 TCATCGTAGAAAAAGAATTCAGAGTTCAACCAATCTTTATCTGTTAAATCCCTTCTTTTC S S - K K N S E F N Q S L S V K S L L F H R R K R I Q S S T N L Y L L N P F F S F I V E K E F R V Q P I F I C - I P S F . . . . . . 15808 CCGCCAATTAATTTCCATTCATTCCACATCCTGTCCACATTGGCATGGTGGCAGTAAAAA P P I N F H S F H I L S T L A W W Q - K R Q L I S I H S T S C P H W H G G S K K P A N - F P F I P H P V H I G M V A V K . . . . . 15868 ATCGGATCTAAACCGGCTGAGTAGAAATTACCCATGTCTTCACCGT I G S K P A E - K L P M S S P S D L N R L S R N Y P C L H R N R I - T G - V E I T H V F T Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0336I24.1+_PGL-3_AGS-3_PPS_1 (15653 15913) (frame '2'; 261 bp, 87 residues) 1 NYAMEWALAR NRIPFFYCPN SHGLSHGKGY DFHRRKRIQS STNLYLLNPF FSRQLISIHS 61 TSCPHWHGGS KKSDLNRLSR NYPCLHR PGL 4 (+ strand): 24538 29602 AGS-1 (24538 24989) SCR (e 0.935) Exon 1 24538 24989 ( 452 n); score: 0.935 PGS (24538 24989) SGN-E211090- PGS (24538 24989) SGN-E206285+ PGS (24538 24799) SGN-E206496+ PGS (24538 24797) SGN-E207598+ PGS (24538 24782) SGN-E389613+ PGS (24538 24753) SGN-E370622+ PGS (24538 24753) SGN-E271645+ PGS (24553 24989) SGN-E205772- PGS (24587 24989) SGN-E205773- PGS (24623 24954) SGN-E243194+ 3-phase translation of AGS-1 (+strand): . . . . . . 24538 GACCGAAAATAAGCAGGTGTATATGCGGAAGCTAGCAACGCAAATTTCGAAAGACCATGA D R K - A G V Y A E A S N A N F E R P - T E N K Q V Y M R K L A T Q I S K D H E P K I S R C I C G S - Q R K F R K T M . . . . . . 24598 GTAAGAAGACAATGAGAAATATACCAAAAGACACAAACATTTAACGTGGTTCGGTCAATC V R R Q - E I Y Q K T Q T F N V V R S I - E D N E K Y T K R H K H L T W F G Q S S K K T M R N I P K D T N I - R G S V N . . . . . . 24658 GACCTACGTCCACAAAGGAGATGAGCAATCCACCATAAATATGAGAGTACAAAATACAGA D L R P Q R R - A I H H K Y E S T K Y R T Y V H K G D E Q S T I N M R V Q N T E R P T S T K E M S N P P - I - E Y K I Q . . . . . . 24718 GGGAAACAACCTCAACCGATTCACCCAGAATACATGGGAGGTTCACACAAGTGATAACGT G K Q P Q P I H P E Y M G G S H K - - R G N N L N R F T Q N T W E V H T S D N V R E T T S T D S P R I H G R F T Q V I T . . . . . . 24778 ATCAAGCTTGTGACCCACAAATTCTCCCCCTAACCAAAACTCTCAAAACCCTTAAGACTA I K L V T H K F S P - P K L S K P L R L S S L - P T N S P P N Q N S Q N P - D Y Y Q A C D P Q I L P L T K T L K T L K T . . . . . . 24838 CATTGTGAATGCTAATTAAGTTAGAAGGAACATGACTCTATTTATAGAGTCCTAAACCTT H C E C - L S - K E H D S I Y R V L N L I V N A N - V R R N M T L F I E S - T F T L - M L I K L E G T - L Y L - S P K P . . . . . . 24898 TTCCTACAAGAAAAGGATTAGTCAATCCAAAACATTTTCCTACAAGGAAAACCTATTTAT F L Q E K D - S I Q N I F L Q G K P I Y S Y K K R I S Q S K T F S Y K E N L F M F P T R K G L V N P K H F P T R K T Y L . . . . 24958 GGTAACAAATTTAGGGCAAATAAAACCCAACA G N K F R A N K T Q V T N L G Q I K P N W - Q I - G K - N P T Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (-strand): . . . . . . 24989 TGTTGGGTTTTATTTGCCCTAAATTTGTTACCATAAATAGGTTTTCCTTGTAGGAAAATG C W V L F A L N L L P - I G F P C R K M V G F Y L P - I C Y H K - V F L V G K C L G F I C P K F V T I N R F S L - E N . . . . . . 24929 TTTTGGATTGACTAATCCTTTTCTTGTAGGAAAAGGTTTAGGACTCTATAAATAGAGTCA F W I D - S F S C R K R F R T L - I E S F G L T N P F L V G K G L G L Y K - S H V L D - L I L F L - E K V - D S I N R V . . . . . . 24869 TGTTCCTTCTAACTTAATTAGCATTCACAATGTAGTCTTAAGGGTTTTGAGAGTTTTGGT C S F - L N - H S Q C S L K G F E S F G V P S N L I S I H N V V L R V L R V L V M F L L T - L A F T M - S - G F - E F W . . . . . . 24809 TAGGGGGAGAATTTGTGGGTCACAAGCTTGATACGTTATCACTTGTGTGAACCTCCCATG - G E N L W V T S L I R Y H L C E P P M R G R I C G S Q A - Y V I T C V N L P C L G G E F V G H K L D T L S L V - T S H . . . . . . 24749 TATTCTGGGTGAATCGGTTGAGGTTGTTTCCCTCTGTATTTTGTACTCTCATATTTATGG Y S G - I G - G C F P L Y F V L S Y L W I L G E S V E V V S L C I L Y S H I Y G V F W V N R L R L F P S V F C T L I F M . . . . . . 24689 TGGATTGCTCATCTCCTTTGTGGACGTAGGTCGATTGACCGAACCACGTTAAATGTTTGT W I A H L L C G R R S I D R T T L N V C G L L I S F V D V G R L T E P R - M F V V D C S S P L W T - V D - P N H V K C L . . . . . . 24629 GTCTTTTGGTATATTTCTCATTGTCTTCTTACTCATGGTCTTTCGAAATTTGCGTTGCTA V F W Y I S H C L L T H G L S K F A L L S F G I F L I V F L L M V F R N L R C - C L L V Y F S L S S Y S W S F E I C V A . . . . 24569 GCTTCCGCATATACACCTGCTTATTTTCGGTC A S A Y T P A Y F R L P H I H L L I F G S F R I Y T C L F S V Maximal non-overlapping open reading frames (>= 64 codons): none AGS-2 (24539 24755,24892 25012,26941 26962,27782 27797,29572 29602) SCR (e 0.885 d 0.000 a 0.000,e 0.736 d 0.900 a 0.000,e 0.773 d 0.000 a 0.000,e 0.688 d 0.986 a 0.992,e 0.710) Exon 1 24539 24755 ( 217 n); score: 0.885 Intron 1 24756 24891 ( 136 n); Pd: 0.000 Pa: 0.000 Exon 2 24892 25012 ( 121 n); score: 0.736 Intron 2 25013 26940 (1928 n); Pd: 0.900 Pa: 0.000 Exon 3 26941 26962 ( 22 n); score: 0.773 Intron 3 26963 27781 ( 819 n); Pd: 0.000 Pa: 0.000 Exon 4 27782 27797 ( 16 n); score: 0.688 Intron 4 27798 29571 (1774 n); Pd: 0.986 Pa: 0.992 Exon 5 29572 29602 ( 31 n); score: 0.710 PGS (24539 24755,24892 25012,26941 26962,27782 27797,29572 29602) SGN-E543331- 3-phase translation of AGS-2 (+strand): . . . . . . 24539 ACCGAAAATAAGCAGGTGTATATGCGGAAGCTAGCAACGCAAATTTCGAAAGACCATGAG T E N K Q V Y M R K L A T Q I S K D H E P K I S R C I C G S - Q R K F R K T M S R K - A G V Y A E A S N A N F E R P - . . . . . . 24599 TAAGAAGACAATGAGAAATATACCAAAAGACACAAACATTTAACGTGGTTCGGTCAATCG - E D N E K Y T K R H K H L T W F G Q S K K T M R N I P K D T N I - R G S V N R V R R Q - E I Y Q K T Q T F N V V R S I . . . . . . 24659 ACCTACGTCCACAAAGGAGATGAGCAATCCACCATAAATATGAGAGTACAAAATACAGAG T Y V H K G D E Q S T I N M R V Q N T E P T S T K E M S N P P - I - E Y K I Q R D L R P Q R R - A I H H K Y E S T K Y R . . . . : . . 24719 GGAAACAACCTCAACCGATTCACCCAGAATACATGGG : AACCTTTTCCTACAAGAAAAGGA G N N L N R F T Q N T W : E P F P T R K G E T T S T D S P R I H G : N L F L Q E K D G K Q P Q P I H P E Y M G : T F S Y K K R . . . . . . 24915 TTAGTCAATCCAAAACATTTTCCTACAAGGAAAACCTATTTATGGTAACAAATTTAGGGC L V N P K H F P T R K T Y L W - Q I - G - S I Q N I F L Q G K P I Y G N K F R A I S Q S K T F S Y K E N L F M V T N L G . . . . : . . : 24975 AAATAAAACCCAACAGTGTATACTATACGTCATAATTT : ATATCTATCAAACAATTGTGGA : K - N P T V Y T I R H N L : Y L S N N C G : N K T Q Q C I L Y V I I : Y I Y Q T I V E : Q I K P N S V Y Y T S - F : I S I K Q L W : . . : . . . 27782 AGGAACAAAAATATAT : GAAATGATACCTTAGGGTTTGAGCCAAACAT R N K N I : - N D T L G F E P N G T K I Y : E M I P - G L S Q T K E Q K Y M : K - Y L R V - A K H Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0336I24.1+_PGL-4_AGS-2_PPS_1 (24602 24755,24892 24962) (frame '1'; 222 bp, 74 residues) 1 EDNEKYTKRH KHLTWFGQST YVHKGDEQST INMRVQNTEG NNLNRFTQNT WEPFPTRKGL 61 VNPKHFPTRK TYLW- AGS-3 (27161 27330) SCR (e 0.823) Exon 1 27161 27330 ( 170 n); score: 0.823 PGS (27161 27310) SGN-E379427- PGS (27186 27330) SGN-E200682- PGS (27186 27330) SGN-E379333- PGS (27214 27279) SGN-E214252- 3-phase translation of AGS-3 (+strand): . . . . . . 27161 AAATATTTATATTTTACTTATATTATTTTTAATAGGATAACTTTCACATATAGCAAATAA K Y L Y F T Y I I F N R I T F T Y S K - N I Y I L L I L F L I G - L S H I A N K I F I F Y L Y Y F - - D N F H I - Q I . . . . . . 27221 AAAATTCATATTTGTATGATATAGCAAAATTTGTGTAATTACGCTCCATAGCAAACATAA K I H I C M I - Q N L C N Y A P - Q T - K F I F V - Y S K I C V I T L H S K H K K N S Y L Y D I A K F V - L R S I A N I . . . . . 27281 AAACTGTATAATTCGCTATACATATACAATAGCAAACTGTATAAAATAAA K L Y N S L Y I Y N S K L Y K I N C I I R Y T Y T I A N C I K - K T V - F A I H I Q - Q T V - N K Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-3 (-strand): . . . . . . 27330 TTTATTTTATACAGTTTGCTATTGTATATGTATAGCGAATTATACAGTTTTTATGTTTGC F I L Y S L L L Y M Y S E L Y S F Y V C L F Y T V C Y C I C I A N Y T V F M F A Y F I Q F A I V Y V - R I I Q F L C L . . . . . . 27270 TATGGAGCGTAATTACACAAATTTTGCTATATCATACAAATATGAATTTTTTATTTGCTA Y G A - L H K F C Y I I Q I - I F Y L L M E R N Y T N F A I S Y K Y E F F I C Y L W S V I T Q I L L Y H T N M N F L F A . . . . . 27210 TATGTGAAAGTTATCCTATTAAAAATAATATAAGTAAAATATAAATATTT Y V K V I L L K I I - V K Y K Y M - K L S Y - K - Y K - N I N I I C E S Y P I K N N I S K I - I F Maximal non-overlapping open reading frames (>= 64 codons): none PGL 5 (+ strand): 31888 35823 AGS-1 (31888 31996,35622 35823) SCR (e 0.982 d 0.987 a 0.954,e 0.990) Exon 1 31888 31996 ( 109 n); score: 0.982 Intron 1 31997 35621 (3625 n); Pd: 0.987 Pa: 0.954 Exon 2 35622 35823 ( 202 n); score: 0.990 PGS (31888 31996,35622 35823) SGN-E278390+ 3-phase translation of AGS-1 (+strand): . . . . . . 31888 CTCACAGGGCATTTTCTCTCGGGTTTCTTCGTCTCTAATATTATGGGAAGAACTGAAGAA L T G H F L S G F F V S N I M G R T E E S Q G I F S R V S S S L I L W E E L K N H R A F S L G F L R L - Y Y G K N - R . . . . . : . 31948 CTCTTAGAGGAACTTATCAATGTTGAAGTGGAGCTTCTAGATGTTCAAG : ACCAAATAAAA L L E E L I N V E V E L L D V Q : D Q I K S - R N L S M L K W S F - M F K : T K - N T L R G T Y Q C - S G A S R C S R : P N K . . . . . . 35633 TATCTGCTAGACCGACAAGAGAAATTGCATGAGAGACAATTCGAACTTAAAGCTCTTGTG Y L L D R Q E K L H E R Q F E L K A L V I C - T D K R N C M R D N S N L K L L W I S A R P T R E I A - E T I R T - S S C . . . . . . 35693 GAAAGTTGTGAATCATCTAGTGGCCGGGCTTCCGATGCTGCTGCTGTTCCAGTAGATGAT E S C E S S S G R A S D A A A V P V D D K V V N H L V A G L P M L L L F Q - M I G K L - I I - W P G F R C C C C S S R - . . . . . . 35753 TGGTCCAGGCCGTTTGAGTGGGACTCTCAAGCTGATGACATTAGGTTTAATGTTTTTGGC W S R P F E W D S Q A D D I R F N V F G G P G R L S G T L K L M T L G L M F L A L V Q A V - V G L S S - - H - V - C F W . . 35813 ATATCTAAATA I S K Y L N H I - I Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0336I24.1+_PGL-5_AGS-1_PPS_1 (31888 31996,35622 35821) (frame '1'; 309 bp, 103 residues) 1 LTGHFLSGFF VSNIMGRTEE LLEELINVEV ELLDVQDQIK YLLDRQEKLH ERQFELKALV 61 ESCESSSGRA SDAAAVPVDD WSRPFEWDSQ ADDIRFNVFG ISK PGL 6 (+ strand): 49447 54528 AGS-1 (49447 49497,49598 49702,49788 49910,51463 51551,54405 54441,54518 54528) SCR (e 0.961 d 0.917 a 0.967,e 1.000 d 0.000 a 1.000,e 1.000 d 0.265 a 0.999,e 1.000 d 0.999 a 0.983,e 1.000 d 0.983 a 0.998,e 1.000) Exon 1 49447 49497 ( 51 n); score: 0.961 Intron 1 49498 49597 ( 100 n); Pd: 0.917 Pa: 0.967 Exon 2 49598 49702 ( 105 n); score: 1.000 Intron 2 49703 49787 ( 85 n); Pd: 0.000 Pa: 1.000 Exon 3 49788 49910 ( 123 n); score: 1.000 Intron 3 49911 51462 (1552 n); Pd: 0.265 Pa: 0.999 Exon 4 51463 51551 ( 89 n); score: 1.000 Intron 4 51552 54404 (2853 n); Pd: 0.999 Pa: 0.983 Exon 5 54405 54441 ( 37 n); score: 1.000 Intron 5 54442 54517 ( 76 n); Pd: 0.983 Pa: 0.998 Exon 6 54518 54528 ( 11 n); score: 1.000 PGS (49447 49497,49598 49702,49788 49910,51463 51551,54405 54441,54518 54528) SGN-E325351+ 3-phase translation of AGS-1 (+strand): . . . . . . : 49447 CTTGGTATATTAAAGACTCAGTTTCCTAATGTTCCCATGGTCGCTCTAACA : GCAACTGCA L G I L K T Q F P N V P M V A L T : A T A L V Y - R L S F L M F P W S L - Q : Q L Q W Y I K D S V S - C S H G R S N : S N C . . . . . . 49607 ACAAAGAAAGTACAGGATGATCTGATGGAGATGCTTCACATTCCAAGATGTGTTAAGTTT T K K V Q D D L M E M L H I P R C V K F Q R K Y R M I - W R C F T F Q D V L S L N K E S T G - S D G D A S H S K M C - V . . . . : . . 49667 GTTAGTTCAGTGAACAGACCCAACCTTTATTACATG : GTACGTGAGAAGTCATCTATAGCA V S S V N R P N L Y Y M : V R E K S S I A L V Q - T D P T F I T W : Y V R S H L - Q C - F S E Q T Q P L L H : G T - E V I Y S . . . . . . 49812 AAGACAGTGGTTGATGAAATTGCTGAATATATTCAATCATCATATCCAAATAATGAATCT K T V V D E I A E Y I Q S S Y P N N E S R Q W L M K L L N I F N H H I Q I M N L K D S G - - N C - I Y S I I I S K - - I . . . . : . . 49872 GGGATAGTTTATTGCTTTTCCAGGAAGGAGTGTGAACAG : GTTGCACAAGAATTACGTGAA G I V Y C F S R K E C E Q : V A Q E L R E G - F I A F P G R S V N R : L H K N Y V K W D S L L L F Q E G V - T : G C T R I T - . . . . . . 51484 AGGGGAATTTCGGCTGATCACTATCATGCGGATATGGATGTGAATGCTCGTGAGAGAGTT R G I S A D H Y H A D M D V N A R E R V G E F R L I T I M R I W M - M L V R E F K G N F G - S L S C G Y G C E C S - E S . : . . . . : . 51544 CATCTAAG : GTGGAGTAATGGAAAGCTGCAAGTCATTGTGGGGACG : GTGGCATTTGG H L R : W S N G K L Q V I V G T : V A F I - : G G V M E S C K S L W G R : W H L S S K : V E - W K A A S H C G D : G G I W Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0336I24.1+_PGL-6_AGS-1_PPS_1 (49447 49497,49598 49702,49788 49910,51463 51551,54405 54441,54518 54526) (frame '1'; 414 bp, 138 residues) 1 LGILKTQFPN VPMVALTATA TKKVQDDLME MLHIPRCVKF VSSVNRPNLY YMVREKSSIA 61 KTVVDEIAEY IQSSYPNNES GIVYCFSRKE CEQVAQELRE RGISADHYHA DMDVNARERV 121 HLRWSNGKLQ VIVGTVAF PGL 7 (+ strand): 60331 61266 AGS-1 (60331 61266) SCR (e 0.998) Exon 1 60331 61266 ( 936 n); score: 0.998 PGS (60331 60990) SGN-E550286+ PGS (60331 60988) SGN-E389715+ PGS (60332 60810) SGN-E228350+ PGS (60725 61266) SGN-E550080- 3-phase translation of AGS-1 (+strand): . . . . . . 60331 AATTGGATGACTAAGAATGTCATAACACCCTATGGATGTTCAGTCTGGAGAGCTATTAGG N W M T K N V I T P Y G C S V W R A I R I G - L R M S - H P M D V Q S G E L L G L D D - E C H N T L W M F S L E S Y - . . . . . . 60391 AATCTTTGGCCAAAGATACAAATCAGAACTAAGGTGAGGATAGGAAATGGGCAGAAAACC N L W P K I Q I R T K V R I G N G Q K T I F G Q R Y K S E L R - G - E M G R K P E S L A K D T N Q N - G E D R K W A E N . . . . . . 60451 TCTTTTGGCATGACAAGTGGGCAGGGCTTTGAACAATGAAACAACAACATCTGGAGCTAT S F G M T S G Q G F E Q - N N N I W S Y L L A - Q V G R A L N N E T T T S G A I L F W H D K W A G L - T M K Q Q H L E L . . . . . . 60511 ACACTCTAAGCCAGCAACAAGAAGCCACAGTTGCCATGATGTGGACTGGACAAGGATGGA T L - A S N K K P Q L P - C G L D K D G H S K P A T R S H S C H D V D W T R M E Y T L S Q Q Q E A T V A M M W T G Q G W . . . . . . 60571 ATCTATATCTAAGGAGATATCTGAATGATTGGGAGATTGGGAGGATAACAGAATTCTATA I Y I - G D I - M I G R L G G - Q N S I S I S K E I S E - L G D W E D N R I L - N L Y L R R Y L N D W E I G R I T E F Y . . . . . . 60631 ACTCAGTAGCAAGTTTCAACAATCTGACTGACGAAGTGGACAGACTAGAATTGAACAGAA T Q - Q V S T I - L T K W T D - N - T E L S S K F Q Q S D - R S G Q T R I E Q K N S V A S F N N L T D E V D R L E L N R . . . . . . 60691 ACAGTAAGGGAATTTTTTCTGTCAAATCTGCATACAGGGAGCTAATGTAGAAGTGGTGAA T V R E F F L S N L H T G S - C R S G E Q - G N F F C Q I C I Q G A N V E V V K N S K G I F S V K S A Y R E L M - K W - . . . . . . 60751 GGAAAGAGATTGGCCTTGGAAGATGATATGGAAACCAAAAATTCCCTACAAAGTTAACTG G K R L A L E D D M E T K N S L Q S - L E R D W P W K M I W K P K I P Y K V N C R K E I G L G R - Y G N Q K F P T K L T . . . . . . 60811 TTTCATCTGGCTTCTGGCCAAAGAAGCAGTGTTAACTCATGATAACCTGAACAAAAGGGG F H L A S G Q R S S V N S - - P E Q K G F I W L L A K E A V L T H D N L N K R G V S S G F W P K K Q C - L M I T - T K G . . . . . . 60871 TCACCAGCTAACCGCTGGCTGTTTTTTATGTGGGGAACAAGTTGAGACAATCAACCATCT S P A N R W L F F M W G T S - D N Q P S H Q L T A G C F L C G E Q V E T I N H L V T S - P L A V F Y V G N K L R Q S T I . . . . . . 60931 TTTTTTGCACTGCAAATGGACAGACCAGCTTTGGAGGATGTTCATCAGTTGGAAAGGGAT F F A L Q M D R P A L E D V H Q L E R D F L H C K W T D Q L W R M F I S W K G I F F C T A N G Q T S F G G C S S V G K G . . . . . . 60991 TAGTTGGGTGAAACCTGGAAGCATTGCAGACATTCTAAGATGCTGGAATGTGGATGGTAA - L G E T W K H C R H S K M L E C G W - S W V K P G S I A D I L R C W N V D G N L V G - N L E A L Q T F - D A G M W M V . . . . . . 61051 TGTGTGCAAGAAGGAAGAAAAATGGAAGATCGTCCCAGCATGTATTTGGTGGTCAATTTG C V Q E G R K M E D R P S M Y L V V N L V C K K E E K W K I V P A C I W W S I W M C A R R K K N G R S S Q H V F G G Q F . . . . . . 61111 GATTCAGAGGAACAAAAGGTGCTTTGAGGGGACTCAAAACAAGATTCAGAATCTTAAAAT D S E E Q K V L - G D S K Q D S E S - N I Q R N K R C F E G T Q N K I Q N L K M G F R G T K G A L R G L K T R F R I L K . . . . . . 61171 GAATTGTTTATGCCTTTATTATTTTTGGTGTGAGCAAAAACTACTAGCTCAAACAGAAGA E L F M P L L F L V - A K T T S S N R R N C L C L Y Y F W C E Q K L L A Q T E D - I V Y A F I I F G V S K N Y - L K Q K . . . . 61231 TATTTGTGATGTTTTTAACTTTTTGTAAGGCACAGA Y L - C F - L F V R H R I C D V F N F L - G T I F V M F L T F C K A Q Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0336I24.1+_PGL-7_AGS-1_PPS_1 (60698 61258) (frame '2'; 558 bp, 186 residues) 1 GNFFCQICIQ GANVEVVKER DWPWKMIWKP KIPYKVNCFI WLLAKEAVLT HDNLNKRGHQ 61 LTAGCFLCGE QVETINHLFL HCKWTDQLWR MFISWKGISW VKPGSIADIL RCWNVDGNVC 121 KKEEKWKIVP ACIWWSIWIQ RNKRCFEGTQ NKIQNLKMNC LCLYYFWCEQ KLLAQTEDIC 181 DVFNFL- 3-phase translation of AGS-1 (-strand): . . . . . . 61266 TCTGTGCCTTACAAAAAGTTAAAAACATCACAAATATCTTCTGTTTGAGCTAGTAGTTTT S V P Y K K L K T S Q I S S V - A S S F L C L T K S - K H H K Y L L F E L V V F C A L Q K V K N I T N I F C L S - - F . . . . . . 61206 TGCTCACACCAAAAATAATAAAGGCATAAACAATTCATTTTAAGATTCTGAATCTTGTTT C S H Q K - - R H K Q F I L R F - I L F A H T K N N K G I N N S F - D S E S C F L L T P K I I K A - T I H F K I L N L V . . . . . . 61146 TGAGTCCCCTCAAAGCACCTTTTGTTCCTCTGAATCCAAATTGACCACCAAATACATGCT - V P S K H L L F L - I Q I D H Q I H A E S P Q S T F C S S E S K L T T K Y M L L S P L K A P F V P L N P N - P P N T C . . . . . . 61086 GGGACGATCTTCCATTTTTCTTCCTTCTTGCACACATTACCATCCACATTCCAGCATCTT G T I F H F S S F L H T L P S T F Q H L G R S S I F L P S C T H Y H P H S S I L W D D L P F F F L L A H I T I H I P A S . . . . . . 61026 AGAATGTCTGCAATGCTTCCAGGTTTCACCCAACTAATCCCTTTCCAACTGATGAACATC R M S A M L P G F T Q L I P F Q L M N I E C L Q C F Q V S P N - S L S N - - T S - N V C N A S R F H P T N P F P T D E H . . . . . . 60966 CTCCAAAGCTGGTCTGTCCATTTGCAGTGCAAAAAAAGATGGTTGATTGTCTCAACTTGT L Q S W S V H L Q C K K R W L I V S T C S K A G L S I C S A K K D G - L S Q L V P P K L V C P F A V Q K K M V D C L N L . . . . . . 60906 TCCCCACATAAAAAACAGCCAGCGGTTAGCTGGTGACCCCTTTTGTTCAGGTTATCATGA S P H K K Q P A V S W - P L L F R L S - P H I K N S Q R L A G D P F C S G Y H E F P T - K T A S G - L V T P F V Q V I M . . . . . . 60846 GTTAACACTGCTTCTTTGGCCAGAAGCCAGATGAAACAGTTAACTTTGTAGGGAATTTTT V N T A S L A R S Q M K Q L T L - G I F L T L L L W P E A R - N S - L C R E F L S - H C F F G Q K P D E T V N F V G N F . . . . . . 60786 GGTTTCCATATCATCTTCCAAGGCCAATCTCTTTCCTTCACCACTTCTACATTAGCTCCC G F H I I F Q G Q S L S F T T S T L A P V S I S S S K A N L F P S P L L H - L P W F P Y H L P R P I S F L H H F Y I S S . . . . . . 60726 TGTATGCAGATTTGACAGAAAAAATTCCCTTACTGTTTCTGTTCAATTCTAGTCTGTCCA C M Q I - Q K K F P Y C F C S I L V C P V C R F D R K N S L T V S V Q F - S V H L Y A D L T E K I P L L F L F N S S L S . . . . . . 60666 CTTCGTCAGTCAGATTGTTGAAACTTGCTACTGAGTTATAGAATTCTGTTATCCTCCCAA L R Q S D C - N L L L S Y R I L L S S Q F V S Q I V E T C Y - V I E F C Y P P N T S S V R L L K L A T E L - N S V I L P . . . . . . 60606 TCTCCCAATCATTCAGATATCTCCTTAGATATAGATTCCATCCTTGTCCAGTCCACATCA S P N H S D I S L D I D S I L V Q S T S L P I I Q I S P - I - I P S L S S P H H I S Q S F R Y L L R Y R F H P C P V H I . . . . . . 60546 TGGCAACTGTGGCTTCTTGTTGCTGGCTTAGAGTGTATAGCTCCAGATGTTGTTGTTTCA W Q L W L L V A G L E C I A P D V V V S G N C G F L L L A - S V - L Q M L L F H M A T V A S C C W L R V Y S S R C C C F . . . . . . 60486 TTGTTCAAAGCCCTGCCCACTTGTCATGCCAAAAGAGGTTTTCTGCCCATTTCCTATCCT L F K A L P T C H A K R G F L P I S Y P C S K P C P L V M P K E V F C P F P I L I V Q S P A H L S C Q K R F S A H F L S . . . . . . 60426 CACCTTAGTTCTGATTTGTATCTTTGGCCAAAGATTCCTAATAGCTCTCCAGACTGAACA H L S S D L Y L W P K I P N S S P D - T T L V L I C I F G Q R F L I A L Q T E H S P - F - F V S L A K D S - - L S R L N . . . . 60366 TCCATAGGGTGTTATGACATTCTTAGTCATCCAATT S I G C Y D I L S H P I P - G V M T F L V I Q I H R V L - H S - S S N Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0336I24.1-_PGL-7_AGS-1_PPS_1 (60645 60370) (frame '1'; 273 bp, 91 residues) 1 NLLLSYRILL SSQSPNHSDI SLDIDSILVQ STSWQLWLLV AGLECIAPDV VVSLFKALPT 61 CHAKRGFLPI SYPHLSSDLY LWPKIPNSSP D- >C08HBa0336I24.1-_PGL-7_AGS-1_PPS_2 (61113 60871) (frame '1'; 240 bp, 80 residues) 1 IQIDHQIHAG TIFHFSSFLH TLPSTFQHLR MSAMLPGFTQ LIPFQLMNIL QSWSVHLQCK 61 KRWLIVSTCS PHKKQPAVSW - >C08HBa0336I24.1-_PGL-7_AGS-1_PPS_3 (60841 60626) (frame '0'; 213 bp, 71 residues) 1 HCFFGQKPDE TVNFVGNFWF PYHLPRPISF LHHFYISSLY ADLTEKIPLL FLFNSSLSTS 61 SVRLLKLATE L- PGL 8 (+ strand): 66709 67977 AGS-1 (66709 66750,67653 67977) SCR (e 1.000 d 0.954 a 0.990,e 0.991) Exon 1 66709 66750 ( 42 n); score: 1.000 Intron 1 66751 67652 ( 902 n); Pd: 0.954 Pa: 0.990 Exon 2 67653 67977 ( 325 n); score: 0.991 PGS (66709 66750,67653 67977) SGN-E278535- 3-phase translation of AGS-1 (+strand): . . . . . : . 66709 ATCAGTACCTTGAGTGCACAGAAACCAAAATCAATTGAAGAG : TTGGAGAAGATAATTGGC I S T L S A Q K P K S I E E : L E K I I G S V P - V H R N Q N Q L K S : W R R - L A Q Y L E C T E T K I N - R : V G E D N W . . . . . . 67671 AAGTTGAAGACTGAAAAATACGGAGGCAGAATTCTTGAAGAGATTGCTAGTTATGAGTCT K L K T E K Y G G R I L E E I A S Y E S S - R L K N T E A E F L K R L L V M S L Q V E D - K I R R Q N S - R D C - L - V . . . . . . 67731 GATCCCCAAAAAAATAATGCAGATGGAAGCAAAGAGACCAAAGGCAATACTGTTAAGAAG D P Q K N N A D G S K E T K G N T V K K I P K K I M Q M E A K R P K A I L L R S - S P K K - C R W K Q R D Q R Q Y C - E . . . . . . 67791 TTGAAAACCAAGAAAACTCTTGTAGTCCTTGAAAGTAGTGAAGATGAAACATGAATTTCT L K T K K T L V V L E S S E D E T - I S - K P R K L L - S L K V V K M K H E F L V E N Q E N S C S P - K - - R - N M N F . . . . . . 67851 GCATCTTTTTTAGAAATATGATCATACTAAGTACTCTTATTGTTAATTTTGTTGGATCAT A S F L E I - S Y - V L L L L I L L D H H L F - K Y D H T K Y S Y C - F C W I I C I F F R N M I I L S T L I V N F V G S . . . . . . 67911 ACTGGATATGTTATTGATCATATAGTACTTATCCGTAACATATGTATCTGATAAACCTTT T G Y V I D H I V L I R N I C I - - T F L D M L L I I - Y L S V T Y V S D K P F Y W I C Y - S Y S T Y P - H M Y L I N L . 67971 TGACCCT - P D P L T Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0336I24.1+_PGL-8_AGS-1_PPS_1 (66709 66750,67653 67844) (frame '1'; 231 bp, 77 residues) 1 ISTLSAQKPK SIEELEKIIG KLKTEKYGGR ILEEIASYES DPQKNNADGS KETKGNTVKK 61 LKTKKTLVVL ESSEDET- PGL 9 (+ strand): 72931 76068 AGS-1 (72931 73038,73411 73523,73617 73870) SCR (e 1.000 d 0.960 a 0.992,e 1.000 d 0.985 a 0.480,e 0.996) Exon 1 72931 73038 ( 108 n); score: 1.000 Intron 1 73039 73410 ( 372 n); Pd: 0.960 Pa: 0.992 Exon 2 73411 73523 ( 113 n); score: 1.000 Intron 2 73524 73616 ( 93 n); Pd: 0.985 Pa: 0.480 Exon 3 73617 73870 ( 254 n); score: 0.996 PGS (72931 73038,73411 73523,73617 73870) SGN-E317641+ 3-phase translation of AGS-1 (+strand): . . . . . . 72931 TTAAAAGTAGTTTCCTACAGTGAATTGTATGGGTGGACGATGGATGAAATAGTGAAATTG L K V V S Y S E L Y G W T M D E I V K L - K - F P T V N C M G G R W M K - - N - K S S F L Q - I V W V D D G - N S E I . . . . . : . 72991 ATAGGCTTGAAGAACAACTGCACATTTTGTGGTGTTTTCCGTCGGCAG : GCCCTTGATCGA I G L K N N C T F C G V F R R Q : A L D R - A - R T T A H F V V F S V G R : P L I E D R L E E Q L H I L W C F P S A : G P - S . . . . . . 73423 GGTGCTGCACTGCTAAAGGTAGACAAGCTCGTTACCGGACATAATGCAGATGATATTGCT G A A L L K V D K L V T G H N A D D I A V L H C - R - T S S L P D I M Q M I L L R C C T A K G R Q A R Y R T - C R - Y C . . . . . : . 73483 GAAACAGTCCTTTTAAATATTTTACGAGGTGATATTGCAAG : ATTGGGTAGATGCACGTCG E T V L L N I L R G D I A R : L G R C T S K Q S F - I F Y E V I L Q : D W V D A R R - N S P F K Y F T R - Y C K : I G - M H V . . . . . . 73636 ATAATTACTGGAGAAGATGGGCCAATACCGAGATGCAAGCCCTTCAAATACACTTATGAG I I T G E D G P I P R C K P F K Y T Y E - L L E K M G Q Y R D A S P S N T L M R D N Y W R R W A N T E M Q A L Q I H L - . . . . . . 73696 AAGGAAATTGTCATATATCCTTTTCTTTGATAGTATTTTATTGGGCTACCCCTACCTATA K E I V I Y P F L - - Y F I G L P L P I R K L S Y I L F F D S I L L G Y P Y L Y E G N C H I S F S L I V F Y W A T P T Y . . . . . . 73756 TACTTCAAATGGCTGCATCTTCCCTAGTAAAATCATTGCTTTGTGATTGTGATCACTTAT Y F K W L H L P - - N H C F V I V I T Y T S N G C I F P S K I I A L - L - S L M I L Q M A A S S L V K S L L C D C D H L . . . . . . 73816 GACTATGCTGCCTTAACTTGCTGTTACGTATGCATACTTTAAAAAGCTGGACTAC D Y A A L T C C Y V C I L - K A G L T M L P - L A V T Y A Y F K K L D Y - L C C L N L L L R M H T L K S W T Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0336I24.1+_PGL-9_AGS-1_PPS_1 (72931 73038,73411 73523,73617 73725) (frame '1'; 327 bp, 109 residues) 1 LKVVSYSELY GWTMDEIVKL IGLKNNCTFC GVFRRQALDR GAALLKVDKL VTGHNADDIA 61 ETVLLNILRG DIARLGRCTS IITGEDGPIP RCKPFKYTYE KEIVIYPFL- AGS-2 (73656 73709,73843 73883,75063 75129,75240 75351,75740 76068) SCR (e 1.000 d 0.990 a 0.000,e 1.000 d 0.989 a 0.991,e 1.000 d 0.982 a 0.671,e 1.000 d 0.998 a 0.985,e 1.000) Exon 1 73656 73709 ( 54 n); score: 1.000 Intron 1 73710 73842 ( 133 n); Pd: 0.990 Pa: 0.000 Exon 2 73843 73883 ( 41 n); score: 1.000 Intron 2 73884 75062 (1179 n); Pd: 0.989 Pa: 0.991 Exon 3 75063 75129 ( 67 n); score: 1.000 Intron 3 75130 75239 ( 110 n); Pd: 0.982 Pa: 0.671 Exon 4 75240 75351 ( 112 n); score: 1.000 Intron 4 75352 75739 ( 388 n); Pd: 0.998 Pa: 0.985 Exon 5 75740 76068 ( 329 n); score: 1.000 PGS (73656 73709,73843 73883,75063 75129,75240 75351,75740 76057) SGN-E548973+ PGS (73656 73709,73843 73883,75063 75129,75240 75351,75740 76057) SGN-E544016- PGS (73657 73709,73843 73883,75063 75129,75240 75351,75740 75995) SGN-E302716+ PGS (73699 73709,73843 73883,75063 75129,75240 75351,75740 76057) SGN-E302717- PGS (75063 75129,75240 75351,75740 76068) SGN-E338465+ 3-phase translation of AGS-2 (+strand): . . . . . . : 73656 GCCAATACCGAGATGCAAGCCCTTCAAATACACTTATGAGAAGGAAATTGTCAT : GTATGC A N T E M Q A L Q I H L - E G N C H : V C P I P R C K P F K Y T Y E K E I V M : Y A Q Y R D A S P S N T L M R R K L S : C M . . . . : . . 73849 ATACTTTAAAAAGCTGGACTACTTCTCTACAGAAT : GTATTTATTCCCCCAATGCGTATCG I L - K A G L L L Y R M : Y L F P Q C V S Y F K K L D Y F S T E : C I Y S P N A Y R H T L K S W T T S L Q N : V F I P P M R I . . . . . : . 75088 TGGCTTTGCTCGTGAGTTCATTAAACATTTAGAAAGGATGAG : ACCAAGAGCCATTCTTGA W L C S - V H - T F R K D E : T K S H S - G F A R E F I K H L E R M R : P R A I L D V A L L V S S L N I - K G - : D Q E P F L . . . . . . 75258 CATTATCAAATCAGGTGAAGACTTTCGGATCTCCACCTCTACAAAAATGCCAGAACAAGG H Y Q I R - R L S D L H L Y K N A R T R I I K S G E D F R I S T S T K M P E Q G T L S N Q V K T F G S P P L Q K C Q N K . . . . : . . 75318 CACTTGTGAAAGATGTGGTTACATATCCAGCCAG : AAATGGTGCAAAGCATGTGTCTTGCT H L - K M W L H I Q P : E M V Q S M C L A T C E R C G Y I S S Q : K W C K A C V L L A L V K D V V T Y P A R : N G A K H V S C . . . . . . 75766 TGAGGGCCTCAATCGTGGTTTACCCAAATTAGGCATTGGGCGGAGTCGGGGGATTAATAG - G P Q S W F T Q I R H W A E S G D - - E G L N R G L P K L G I G R S R G I N S L R A S I V V Y P N - A L G G V G G L I . . . . . . 75826 CGAACATAATGCAAATACGAAACAAGCTAATGGAACACAAAGTTTACAAAGCAAACAGTG R T - C K Y E T S - W N T K F T K Q T V E H N A N T K Q A N G T Q S L Q S K Q C A N I M Q I R N K L M E H K V Y K A N S . . . . . . 75886 TGGAAGTTTGGACTTCTGAATCCTCATGTAGCTGCATAAATCAGTGTTTTAATTACAACA W K F G L L N P H V A A - I S V L I T T G S L D F - I L M - L H K S V F - L Q H V E V W T S E S S C S C I N Q C F N Y N . . . . . . 75946 TACATACCTATCCAGTGAGAAAGGCTTTAACTAGAAATTCCATATTATCTGTGTAGCTTT Y I P I Q - E R L - L E I P Y Y L C S F T Y L S S E K G F N - K F H I I C V A L I H T Y P V R K A L T R N S I L S V - L . . . . . . 76006 ATGTATTTATGGAGGTGGAAACTAGCCTCCTAGTTTATCCTGCGATTATTCTATTTTTTT M Y L W R W K L A S - F I L R L F Y F F C I Y G G G N - P P S L S C D Y S I F L Y V F M E V E T S L L V Y P A I I L F F . 76066 GCG A C Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0336I24.1+_PGL-9_AGS-2_PPS_1 (73657 73709,73843 73883,75063 75129,75240 75351,75740 75904) (frame '2'; 435 bp, 145 residues) 1 PIPRCKPFKY TYEKEIVMYA YFKKLDYFST ECIYSPNAYR GFAREFIKHL ERMRPRAILD 61 IIKSGEDFRI STSTKMPEQG TCERCGYISS QKWCKACVLL EGLNRGLPKL GIGRSRGINS 121 EHNANTKQAN GTQSLQSKQC GSLDF- AGS-3 (74170 74818) SCR (e 0.988) Exon 1 74170 74818 ( 649 n); score: 0.988 PGS (74170 74818) SGN-E314796+ 3-phase translation of AGS-3 (+strand): . . . . . . 74170 TTCAATTCAATGTAGAAGGCTGGGTGGAGAAATTATCTAGAATTCATGAACAAGAACCTC F N S M - K A G W R N Y L E F M N K N L S I Q C R R L G G E I I - N S - T R T S Q F N V E G W V E K L S R I H E Q E P . . . . . . 74230 AAATCCGATTCTATTTGTATACATCAGAAAATAGATCAGGAATGAAAGAGAAACTAAATT K S D S I C I H Q K I D Q E - K R N - I N P I L F V Y I R K - I R N E R E T K L Q I R F Y L Y T S E N R S G M K E K L N . . . . . . 74290 GTCAGCTTCATGTGCCATATTGATCCAAGTATTGTACTTTTCAAGAGAATAACCCCCAAA V S F M C H I D P S I V L F K R I T P K S A S C A I L I Q V L Y F S R E - P P K C Q L H V P Y - S K Y C T F Q E N N P Q . . . . . . 74350 AGCAAAGGTTTCTTGCTGACTTATGGCTAATCATCTGTTCATTCTATATGTCTTTTTTGA S K G F L L T Y G - S S V H S I C L F - A K V S C - L M A N H L F I L Y V F F E K Q R F L A D L W L I I C S F Y M S F L . . . . . . 74410 ACATAATGATAGTCATTTAACATATACTGTCTACGTTACCAAAAAGTCGACTTCTTTCTT T - - - S F N I Y C L R Y Q K V D F F L H N D S H L T Y T V Y V T K K S T S F L N I M I V I - H I L S T L P K S R L L S . . . . . . 74470 AATAATGATAAACATTTTCCCAAAGATCCAACAATATAGACCTATACTACCTTGTATTGT N N D K H F P K D P T I - T Y T T L Y C I M I N I F P K I Q Q Y R P I L P C I V - - - - T F S Q R S N N I D L Y Y L V L . . . . . . 74530 TTCATGATCGATGTGATATTTTTCAACTAACAGTTCCACCTCTTTGAACTACTACTTAGA F M I D V I F F N - Q F H L F E L L L R S - S M - Y F S T N S S T S L N Y Y L E F H D R C D I F Q L T V P P L - T T T - . . . . . . 74590 GCTTTTCTTATCAATCTCAGTACTAAATTAATAATATATCCAACTATCTTACTCTTAAGC A F L I N L S T K L I I Y P T I L L L S L F L S I S V L N - - Y I Q L S Y S - A S F S Y Q S Q Y - I N N I S N Y L T L K . . . . . . 74650 TTTGCGAGTGCTAACCTAATCAATTAGAATGGGACAGAGAAAGTAGTAATTTGAGTGTTC F A S A N L I N - N G T E K V V I - V F L R V L T - S I R M G Q R K - - F E C S L C E C - P N Q L E W D R E S S N L S V . . . . . . 74710 TAGTCTGCAAGTGCCTCCATTGTGCATCATTCTTGCACTTAAACAACATGACATGATCAC - S A S A S I V H H S C T - T T - H D H S L Q V P P L C I I L A L K Q H D M I T L V C K C L H C A S F L H L N N M T - S . . . . . 74770 CTATCACTATCAGTATGACTTCCCAAATATAGTTTTTTGTATGACTACC L S L S V - L P K Y S F L Y D Y Y H Y Q Y D F P N I V F C M T T P I T I S M T S Q I - F F V - L Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-3 (-strand): . . . . . . 74818 GGTAGTCATACAAAAAACTATATTTGGGAAGTCATACTGATAGTGATAGGTGATCATGTC G S H T K N Y I W E V I L I V I G D H V V V I Q K T I F G K S Y - - - - V I M S - S Y K K L Y L G S H T D S D R - S C . . . . . . 74758 ATGTTGTTTAAGTGCAAGAATGATGCACAATGGAGGCACTTGCAGACTAGAACACTCAAA M L F K C K N D A Q W R H L Q T R T L K C C L S A R M M H N G G T C R L E H S N H V V - V Q E - C T M E A L A D - N T Q . . . . . . 74698 TTACTACTTTCTCTGTCCCATTCTAATTGATTAGGTTAGCACTCGCAAAGCTTAAGAGTA L L L S L S H S N - L G - H S Q S L R V Y Y F L C P I L I D - V S T R K A - E - I T T F S V P F - L I R L A L A K L K S . . . . . . 74638 AGATAGTTGGATATATTATTAATTTAGTACTGAGATTGATAAGAAAAGCTCTAAGTAGTA R - L D I L L I - Y - D - - E K L - V V D S W I Y Y - F S T E I D K K S S K - - K I V G Y I I N L V L R L I R K A L S S . . . . . . 74578 GTTCAAAGAGGTGGAACTGTTAGTTGAAAAATATCACATCGATCATGAAACAATACAAGG V Q R G G T V S - K I S H R S - N N T R F K E V E L L V E K Y H I D H E T I Q G S S K R W N C - L K N I T S I M K Q Y K . . . . . . 74518 TAGTATAGGTCTATATTGTTGGATCTTTGGGAAAATGTTTATCATTATTAAGAAAGAAGT - Y R S I L L D L W E N V Y H Y - E R S S I G L Y C W I F G K M F I I I K K E V V V - V Y I V G S L G K C L S L L R K K . . . . . . 74458 CGACTTTTTGGTAACGTAGACAGTATATGTTAAATGACTATCATTATGTTCAAAAAAGAC R L F G N V D S I C - M T I I M F K K D D F L V T - T V Y V K - L S L C S K K T S T F W - R R Q Y M L N D Y H Y V Q K R . . . . . . 74398 ATATAGAATGAACAGATGATTAGCCATAAGTCAGCAAGAAACCTTTGCTTTTGGGGGTTA I - N E Q M I S H K S A R N L C F W G L Y R M N R - L A I S Q Q E T F A F G G Y H I E - T D D - P - V S K K P L L L G V . . . . . . 74338 TTCTCTTGAAAAGTACAATACTTGGATCAATATGGCACATGAAGCTGACAATTTAGTTTC F S - K V Q Y L D Q Y G T - S - Q F S F S L E K Y N T W I N M A H E A D N L V S I L L K S T I L G S I W H M K L T I - F . . . . . . 74278 TCTTTCATTCCTGATCTATTTTCTGATGTATACAAATAGAATCGGATTTGAGGTTCTTGT S F I P D L F S D V Y K - N R I - G S C L S F L I Y F L M Y T N R I G F E V L V L F H S - S I F - C I Q I E S D L R F L . . . . . 74218 TCATGAATTCTAGATAATTTCTCCACCCAGCCTTCTACATTGAATTGAA S - I L D N F S T Q P S T L N - H E F - I I S P P S L L H - I E F M N S R - F L H P A F Y I E L Maximal non-overlapping open reading frames (>= 64 codons): none PGL 10 (- strand): 83483 83204 AGS-1 (83483 83204) SCR (e 0.996) Exon 1 83483 83204 ( 280 n); score: 0.996 PGS (83483 83204) SGN-E314094- 3-phase translation of AGS-1 (-strand): . . . . . . 83483 AAAGCAGTTTTCTCCGACGGAGTTTGTACTGTAGAAACACTACTTGCTGCACAAATCCTT K A V F S D G V C T V E T L L A A Q I L K Q F S P T E F V L - K H Y L L H K S L S S F L R R S L Y C R N T T C C T N P . . . . . . 83423 GTCGATAAAGATCGATTTTTTCTAACTGTATTCAACAGTTTTCTTCTGTTTCTGTACTCA V D K D R F F L T V F N S F L L F L Y S S I K I D F F - L Y S T V F F C F C T Q C R - R S I F S N C I Q Q F S S V S V L . . . . . . 83363 ATTGATAATGGGGTTATTGAAGAATACAAACAACTAGTACAAATTCCCTCCATTTTCTCA I D N G V I E E Y K Q L V Q I P S I F S L I M G L L K N T N N - Y K F P P F S Q N - - W G Y - R I Q T T S T N S L H F L . . . . . . 83303 AATCAAGAAGAAGAAACAGTGAAAATTGAAGAGTGGATTTGGGATTTTTACATATAAAAA N Q E E E T V K I E E W I W D F Y I - K I K K K K Q - K L K S G F G I F T Y K K K S R R R N S E N - R V D L G F L H I K . . . . 83243 AAATGGATTAAGAAGAAACTTTGATTGAAATTCCAAAGTG K W I K K K L - L K F Q S N G L R R N F D - N S K V K M D - E E T L I E I P K Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0336I24.1-_PGL-10_AGS-1_PPS_1 (83483 83247) (frame '1'; 234 bp, 78 residues) 1 KAVFSDGVCT VETLLAAQIL VDKDRFFLTV FNSFLLFLYS IDNGVIEEYK QLVQIPSIFS 61 NQEEETVKIE EWIWDFYI- 3-phase translation of AGS-1 (+strand): . . . . . . 83204 CACTTTGGAATTTCAATCAAAGTTTCTTCTTAATCCATTTTTTTTATATGTAAAAATCCC H F G I S I K V S S - S I F F I C K N P T L E F Q S K F L L N P F F L Y V K I P L W N F N Q S F F L I H F F Y M - K S . . . . . . 83264 AAATCCACTCTTCAATTTTCACTGTTTCTTCTTCTTGATTTGAGAAAATGGAGGGAATTT K S T L Q F S L F L L L D L R K W R E F N P L F N F H C F F F L I - E N G G N L Q I H S S I F T V S S S - F E K M E G I . . . . . . 83324 GTACTAGTTGTTTGTATTCTTCAATAACCCCATTATCAATTGAGTACAGAAACAGAAGAA V L V V C I L Q - P H Y Q L S T E T E E Y - L F V F F N N P I I N - V Q K Q K K C T S C L Y S S I T P L S I E Y R N R R . . . . . . 83384 AACTGTTGAATACAGTTAGAAAAAATCGATCTTTATCGACAAGGATTTGTGCAGCAAGTA N C - I Q L E K I D L Y R Q G F V Q Q V T V E Y S - K K S I F I D K D L C S K - K L L N T V R K N R S L S T R I C A A S . . . . 83444 GTGTTTCTACAGTACAAACTCCGTCGGAGAAAACTGCTTT V F L Q Y K L R R R K L L C F Y S T N S V G E N C F S V S T V Q T P S E K T A Maximal non-overlapping open reading frames (>= 64 codons): none PGL 11 (+ strand): 84124 94911 AGS-1 (84124 84254,86683 86772,86864 87010,87473 87640,87750 87890,87968 88147,91387 91582,94879 94911) SCR (e 0.985 d 0.993 a 1.000,e 1.000 d 0.974 a 0.996,e 1.000 d 0.914 a 0.991,e 1.000 d 0.000 a 0.999,e 1.000 d 0.876 a 0.993,e 1.000 d 0.983 a 0.990,e 0.995 d 0.990 a 0.439,e 1.000) Exon 1 84124 84254 ( 131 n); score: 0.985 Intron 1 84255 86682 (2428 n); Pd: 0.993 Pa: 1.000 Exon 2 86683 86772 ( 90 n); score: 1.000 Intron 2 86773 86863 ( 91 n); Pd: 0.974 Pa: 0.996 Exon 3 86864 87010 ( 147 n); score: 1.000 Intron 3 87011 87472 ( 462 n); Pd: 0.914 Pa: 0.991 Exon 4 87473 87640 ( 168 n); score: 1.000 Intron 4 87641 87749 ( 109 n); Pd: 0.000 Pa: 0.999 Exon 5 87750 87890 ( 141 n); score: 1.000 Intron 5 87891 87967 ( 77 n); Pd: 0.876 Pa: 0.993 Exon 6 87968 88147 ( 180 n); score: 1.000 Intron 6 88148 91386 (3239 n); Pd: 0.983 Pa: 0.990 Exon 7 91387 91582 ( 196 n); score: 0.995 Intron 7 91583 94878 (3296 n); Pd: 0.990 Pa: 0.439 Exon 8 94879 94911 ( 33 n); score: 1.000 PGS (84124 84254,86683 86772,86864 87010,87473 87640,87750 87784) SGN-E369703+ PGS (84124 84254,86683 86772,86864 87010,87473 87622) SGN-E247217+ PGS (87778 87890,87968 88147,91387 91582,94879 94911) SGN-E260234+ 3-phase translation of AGS-1 (+strand): . . . . . . 84124 TGGGGCTTTACTGGACTACACTGGTGTATGATTATTTGGTGGGTCGTGACGAAGAAGTTG W G F T G L H W C M I I W W V V T K K L G A L L D Y T G V - L F G G S - R R S C G L Y W T T L V Y D Y L V G R D E E V . . . . . . 84184 TTCCTTTCCGTGCTCGGCAGCTGAGGAAGCTTTTGTGTGATTTGGGACCTTCTTTCATCA F L S V L G S - G S F C V I W D L L S S S F P C S A A E E A F V - F G T F F H Q V P F R A R Q L R K L L C D L G P S F I . . : . . . . 84244 AAGCAGGACAG : GTACTTGCGAACAGGCCTGATATCATCAGAGAAGATTACATGAATGAAC K Q D R : Y L R T G L I S S E K I T - M N S R T : G T C E Q A - Y H Q R R L H E - T K A G Q : V L A N R P D I I R E D Y M N E . . . . . : . 86732 TTTGCATTCTTCAAGATGATGTTCCTGCCTTTCCTAATCAG : GTTGCTTTTAACATCATAG F A F F K M M F L P F L I R : L L L T S - L H S S R - C S C L S - S : G C F - H H R L C I L Q D D V P A F P N Q : V A F N I I . . . . . . 86883 AAGAGGAATTGGGCCAGCCTCTTGAAGCTGTTTTCAGCAAAATTTCTTCAGAAACTATTG K R N W A S L L K L F S A K F L Q K L L R G I G P A S - S C F Q Q N F F R N Y C E E E L G Q P L E A V F S K I S S E T I . . . . . . 86943 CAGCTGCAAGTTTGGGTCAAGTATACCGAGCTACTTTACGTGCTTCAGGGGAAGAAGTTG Q L Q V W V K Y T E L L Y V L Q G K K L S C K F G S S I P S Y F T C F R G R S C A A A S L G Q V Y R A T L R A S G E E V . : . . . . . 87003 CCATAAAG : GTGCTAAGGCCGCAAATAGAGCCTATCATCTACAGAGATCTTTTTCTCTTCC P - R : C - G R K - S L S S T E I F F S S H K : G A K A A N R A Y H L Q R S F S L P A I K : V L R P Q I E P I I Y R D L F L F . . . . . . 87525 GCACTCTAGCTTCCTTCTTGAATGGCATCAGTCTACAGAAACTGGGGTGTAATGCTGAGC A L - L P S - M A S V Y R N W G V M L S H S S F L L E W H Q S T E T G V - C - A R T L A S F L N G I S L Q K L G C N A E . . . . . . : 87585 TTATAGTTGATGAATTTGGTGAGAAGCTATTGGAGGAGTTGGATTATACCTTGGTA : GAAG L - L M N L V R S Y W R S W I I P W - : K Y S - - I W - E A I G G V G L Y L G : R S L I V D E F G E K L L E E L D Y T L V : E . . . . . . 87754 CTCGTAATATCGAAGACTTCTTGGAAAATTTCAAAGATGACCCTACTGTTAAAATACCTC L V I S K T S W K I S K M T L L L K Y L S - Y R R L L G K F Q R - P Y C - N T S A R N I E D F L E N F K D D P T V K I P . . . . . . 87814 GGGTTTACAGACAGCTTTCTGGTTCACGTGTTTTGGTGATGGAGTGGATTGATGGAATTC G F T D S F L V H V F W - W S G L M E F G L Q T A F W F T C F G D G V D - W N S R V Y R Q L S G S R V L V M E W I D G I . . : . . . . 87874 GGTGCACTGATCCACAG : GCAATCAGAGATGAAGGAATTGATATAGATGGATTTTTAACTG G A L I H R : Q S E M K E L I - M D F - L V H - S T : G N Q R - R N - Y R W I F N C R C T D P Q : A I R D E G I D I D G F L T . . . . . . 88011 TTGGAGTTAGTGCAGCCTTGAGGCAGCTCCTCGAATTTGGCCTATTTCATGGGGACCCTC L E L V Q P - G S S S N L A Y F M G T L W S - C S L E A A P R I W P I S W G P S V G V S A A L R Q L L E F G L F H G D P . . . . . . 88071 ATCCTGGGAATATCTTTGCTATGCGTGATGGACGCATTGCCTATGTGGACTTTGGTAATG I L G I S L L C V M D A L P M W T L V M S W E Y L C Y A - W T H C L C G L W - C H P G N I F A M R D G R I A Y V D F G N . . : . . . . 88131 TTGCTGTGCTCAGTCAG : CAAAATAAACAGATTCTGATTGATGCTGTTGTCCATGCGGTGA L L C S V S : K I N R F - L M L L S M R - C C A Q S : A K - T D S D - C C C P C G E V A V L S Q : Q N K Q I L I D A V V H A V . . . . . . 91430 ATGAGGACTATGCTGAGATGGCAAATGATTTTACCAGGTTGGGATTCCTAGCTAGTGGAA M R T M L R W Q M I L P G W D S - L V E - G L C - D G K - F Y Q V G I P S - W N N E D Y A E M A N D F T R L G F L A S G . . . . . . 91490 CTGATGTTGCCCCTATTGTTCCAGCATTAGAAGCAATATGGCAAAATTCACTTGAAAAAG L M L P L L F Q H - K Q Y G K I H L K K - C C P Y C S S I R S N M A K F T - K R T D V A P I V P A L E A I W Q N S L E K . . . . : . . 91550 GACTTGCCGACTTCAATTTCAGAAGTGTTACAG : GCAAATTCAATCAACTAGTTTACAACT D L P T S I S E V L Q : A N S I N - F T T T C R L Q F Q K C Y R : Q I Q S T S L Q L G L A D F N F R S V T : G K F N Q L V Y N . 94906 ATCCTA I L S Y P Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0336I24.1+_PGL-11_AGS-1_PPS_1 (84126 84254,86683 86772,86864 87010,87473 87640,87750 87890,87968 88147,91387 91582,94879 94910) (frame '0'; 1083 bp, 361 residues) 1 GLYWTTLVYD YLVGRDEEVV PFRARQLRKL LCDLGPSFIK AGQVLANRPD IIREDYMNEL 61 CILQDDVPAF PNQVAFNIIE EELGQPLEAV FSKISSETIA AASLGQVYRA TLRASGEEVA 121 IKVLRPQIEP IIYRDLFLFR TLASFLNGIS LQKLGCNAEL IVDEFGEKLL EELDYTLVEA 181 RNIEDFLENF KDDPTVKIPR VYRQLSGSRV LVMEWIDGIR CTDPQAIRDE GIDIDGFLTV 241 GVSAALRQLL EFGLFHGDPH PGNIFAMRDG RIAYVDFGNV AVLSQQNKQI LIDAVVHAVN 301 EDYAEMANDF TRLGFLASGT DVAPIVPALE AIWQNSLEKG LADFNFRSVT GKFNQLVYNY 361 P AGS-2 (88703 89156) SCR (e 0.814) Exon 1 88703 89156 ( 454 n); score: 0.814 PGS (88703 89156) SGN-E219704- 3-phase translation of AGS-2 (+strand): . . . . . . 88703 CCCGACAAATATTATCCATGGTAAAATCAGATTTGTTTATGAATTTACTTGAAATGTGTT P D K Y Y P W - N Q I C L - I Y L K C V P T N I I H G K I R F V Y E F T - N V F R Q I L S M V K S D L F M N L L E M C . . . . . . 88763 CATCAAAATAGAAAAAGTTAAAAGCTTTGAGAAGCAGAAATTAGTATTTCAAAAATTAAA H Q N R K S - K L - E A E I S I S K I K I K I E K V K S F E K Q K L V F Q K L N S S K - K K L K A L R S R N - Y F K N - . . . . . . 88823 TCTGAAAAAAATTAACTCAAATAGAGAGAGGTGAAAGTAGACCAACAAACATTTAAAGGA S E K N - L K - R E V K V D Q Q T F K G L K K I N S N R E R - K - T N K H L K D I - K K L T Q I E R G E S R P T N I - R . . . . . . 88883 TTCGGTAAACTTTCCGGCAATGAAACTATAAAAAAGATTAGATGGAAAAATTTGATATCA F G K L S G N E T I K K I R W K N L I S S V N F P A M K L - K R L D G K I - Y H I R - T F R Q - N Y K K D - M E K F D I . . . . . . 88943 TGAAGAAGATATATGCTCTAGACATATTTTTTGCTCCTTTCTTAAATTATTTTTGTTGAT - R R Y M L - T Y F L L L S - I I F V D E E D I C S R H I F C S F L K L F L L I M K K I Y A L D I F F A P F L N Y F C - . . . . . . 89003 ATATATAATTAATTTAATTTTCCATATCAAGAAATGACAAAAAGAGGAGAAAGTTGAATA I Y N - F N F P Y Q E M T K R G E S - I Y I I N L I F H I K K - Q K E E K V E Y Y I - L I - F S I S R N D K K R R K L N . . . . . . 89063 TACTATGGTGGCAAGATGGTGGTATATGGAGGAGGAAGTGTGGGAAGGAGAGAGAAGGAA Y Y G G K M V V Y G G G S V G R R E K E T M V A R W W Y M E E E V W E G E R R K I L W W Q D G G I W R R K C G K E R E G . . . . 89123 GAAAAAGAAATAAAAAAGTTTTAAAATCATAAAA E K E I K K F - N H K K K K - K S F K I I K R K R N K K V L K S - Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-2 (-strand): . . . . . . 89156 TTTTATGATTTTAAAACTTTTTTATTTCTTTTTCTTCCTTCTCTCTCCTTCCCACACTTC F Y D F K T F L F L F L P S L S F P H F F M I L K L F Y F F F F L L S P S H T S L - F - N F F I S F S S F S L L P T L . . . . . . 89096 CTCCTCCATATACCACCATCTTGCCACCATAGTATATTCAACTTTCTCCTCTTTTTGTCA L L H I P P S C H H S I F N F L L F L S S S I Y H H L A T I V Y S T F S S F C H P P P Y T T I L P P - Y I Q L S P L F V . . . . . . 89036 TTTCTTGATATGGAAAATTAAATTAATTATATATATCAACAAAAATAATTTAAGAAAGGA F L D M E N - I N Y I Y Q Q K - F K K G F L I W K I K L I I Y I N K N N L R K E I S - Y G K L N - L Y I S T K I I - E R . . . . . . 88976 GCAAAAAATATGTCTAGAGCATATATCTTCTTCATGATATCAAATTTTTCCATCTAATCT A K N M S R A Y I F F M I S N F S I - S Q K I C L E H I S S S - Y Q I F P S N L S K K Y V - S I Y L L H D I K F F H L I . . . . . . 88916 TTTTTATAGTTTCATTGCCGGAAAGTTTACCGAATCCTTTAAATGTTTGTTGGTCTACTT F L - F H C R K V Y R I L - M F V G L L F Y S F I A G K F T E S F K C L L V Y F F F I V S L P E S L P N P L N V C W S T . . . . . . 88856 TCACCTCTCTCTATTTGAGTTAATTTTTTTCAGATTTAATTTTTGAAATACTAATTTCTG S P L S I - V N F F Q I - F L K Y - F L H L S L F E L I F F R F N F - N T N F C F T S L Y L S - F F S D L I F E I L I S . . . . . . 88796 CTTCTCAAAGCTTTTAACTTTTTCTATTTTGATGAACACATTTCAAGTAAATTCATAAAC L L K A F N F F Y F D E H I S S K F I N F S K L L T F S I L M N T F Q V N S - T A S Q S F - L F L F - - T H F K - I H K . . . . 88736 AAATCTGATTTTACCATGGATAATATTTGTCGGG K S D F T M D N I C R N L I L P W I I F V G Q I - F Y H G - Y L S Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0336I24.1-_PGL-11_AGS-2_PPS_1 (89155 88940) (frame '2'; 213 bp, 71 residues) 1 FMILKLFYFF FFLLSPSHTS SSIYHHLATI VYSTFSSFCH FLIWKIKLII YINKNNLRKE 61 QKICLEHISS S- PGL 12 (+ strand): 97180 98541 AGS-1 (97180 97277,97385 97532,97608 97677,97807 97881,98325 98541) SCR (e 0.990 d 0.979 a 0.999,e 1.000 d 0.984 a 0.999,e 1.000 d 0.995 a 0.893,e 1.000 d 0.639 a 0.227,e 1.000) Exon 1 97180 97277 ( 98 n); score: 0.990 Intron 1 97278 97384 ( 107 n); Pd: 0.979 Pa: 0.999 Exon 2 97385 97532 ( 148 n); score: 1.000 Intron 2 97533 97607 ( 75 n); Pd: 0.984 Pa: 0.999 Exon 3 97608 97677 ( 70 n); score: 1.000 Intron 3 97678 97806 ( 129 n); Pd: 0.995 Pa: 0.893 Exon 4 97807 97881 ( 75 n); score: 1.000 Intron 4 97882 98324 ( 443 n); Pd: 0.639 Pa: 0.227 Exon 5 98325 98541 ( 217 n); score: 1.000 PGS (97180 97277,97385 97532,97608 97677,97807 97881,98325 98541) SGN-E296361- PGS (97180 97277,97385 97532,97608 97677,97807 97881,98325 98541) SGN-E296501- 3-phase translation of AGS-1 (+strand): . . . . . . 97180 GGTCTCTTCCAGTGGAAACGACTGGAAAACCTAATATCTCTTGCAAAGGAAAATGTCACG G L F Q W K R L E N L I S L A K E N V T V S S S G N D W K T - Y L L Q R K M S R S L P V E T T G K P N I S C K G K C H . . . . : . . 97240 AAACTGAGCAAAAACCCTGCATTTCGAGGGAATAATAG : AGGAGCAAGCAATCATTTGAAG K L S K N P A F R G N N R : G A S N H L K N - A K T L H F E G I I : E E Q A I I - R E T E Q K P C I S R E - - : R S K Q S F E . . . . . . 97407 AATGAACAGAAGTTAGACCTCACTGACACAATCAAGGATGGAGCTCGACTTTTCATAATT N E Q K L D L T D T I K D G A R L F I I M N R S - T S L T Q S R M E L D F S - L E - T E V R P H - H N Q G W S S T F H N . . . . . . 97467 GACGAAGGAATCCGCAGGCAGCTTCTTCTTGCTTTGACCGAAGACTCCAAGCTTCACATT D E G I R R Q L L L A L T E D S K L H I T K E S A G S F F L L - P K T P S F T L - R R N P Q A A S S C F D R R L Q A S H . : . . . . . 97527 GAAGAA : GTAGTTGATGTATATAGACTGCTTGAAGACCAGGTAGATGTACCTTCAATGGCT E E : V V D V Y R L L E D Q V D V P S M A K K : - L M Y I D C L K T R - M Y L Q W L - R : S S - C I - T A - R P G R C T F N G . . : . . . . 97662 ATGGAACTAGCCCAAG : ACTTACCATCCGTTGCTCGAGATATATTGCTTTCATGGAGTTCC M E L A Q : D L P S V A R D I L L S W S S W N - P K : T Y H P L L E I Y C F H G V P Y G T S P R : L T I R C S R Y I A F M E F . . . . : . . 97851 TCTGTATTATCAGACAGATAGTCCCCTTCTG : GATCTTGTTACCGTGGCACCTGTTATGTC S V L S D R - S P S : G S C Y R G T C Y V L Y Y Q T D S P L L : D L V T V A P V M S L C I I R Q I V P F W : I L L P W H L L C . . . . . . 98354 CGGCGCATAGGTGTTGAGTCCAAATCCCCTTGTCACTTCTGTTCTGCAGATAATAAGTCT R R I G V E S K S P C H F C S A D N K S G A - V L S P N P L V T S V L Q I I S L P A H R C - V Q I P L S L L F C R - - V . . . . . . 98414 TTTGGCATGTATAAACTTGGTGCCTGCACATCTTTTTCACTGAATATAAGAGGAGTGATG F G M Y K L G A C T S F S L N I R G V M L A C I N L V P A H L F H - I - E E - C F W H V - T W C L H I F F T E Y K R S D . . . . . . 98474 TGTTGTAAGTATTCTTTTTGTAAGATAAATGTTACTCCATATTGGACAGTAATATATTTT C C K Y S F C K I N V T P Y W T V I Y F V V S I L F V R - M L L H I G Q - Y I F V L - V F F L - D K C Y S I L D S N I F . 98534 CTATATAA L Y Y I S I - Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0336I24.1+_PGL-12_AGS-1_PPS_1 (97180 97277,97385 97532,97608 97677,97807 97871) (frame '1'; 378 bp, 126 residues) 1 GLFQWKRLEN LISLAKENVT KLSKNPAFRG NNRGASNHLK NEQKLDLTDT IKDGARLFII 61 DEGIRRQLLL ALTEDSKLHI EEVVDVYRLL EDQVDVPSMA MELAQDLPSV ARDILLSWSS 121 SVLSDR- >C08HBa0336I24.1+_PGL-12_AGS-1_PPS_2 (97872 97881,98325 98539) (frame '1'; 225 bp, 75 residues) 1 SPSGSCYRGT CYVRRIGVES KSPCHFCSAD NKSFGMYKLG ACTSFSLNIR GVMCCKYSFC 61 KINVTPYWTV IYFLY AGS-2 (97223 97277,97385 97532,97608 97677,97807 98205) SCR (e 1.000 d 0.979 a 0.999,e 1.000 d 0.984 a 0.999,e 1.000 d 0.995 a 0.893,e 0.995) Exon 1 97223 97277 ( 55 n); score: 1.000 Intron 1 97278 97384 ( 107 n); Pd: 0.979 Pa: 0.999 Exon 2 97385 97532 ( 148 n); score: 1.000 Intron 2 97533 97607 ( 75 n); Pd: 0.984 Pa: 0.999 Exon 3 97608 97677 ( 70 n); score: 1.000 Intron 3 97678 97806 ( 129 n); Pd: 0.995 Pa: 0.893 Exon 4 97807 98205 ( 399 n); score: 0.995 PGS (97223 97277,97385 97532,97608 97677,97807 98205) SGN-E369702- 3-phase translation of AGS-2 (+strand): . . . . . . : 97223 CAAAGGAAAATGTCACGAAACTGAGCAAAAACCCTGCATTTCGAGGGAATAATAG : AGGAG Q R K M S R N - A K T L H F E G I I : E E K G K C H E T E Q K P C I S R E - - : R S K E N V T K L S K N P A F R G N N R : G . . . . . . 97390 CAAGCAATCATTTGAAGAATGAACAGAAGTTAGACCTCACTGACACAATCAAGGATGGAG Q A I I - R M N R S - T S L T Q S R M E K Q S F E E - T E V R P H - H N Q G W S A S N H L K N E Q K L D L T D T I K D G . . . . . . 97450 CTCGACTTTTCATAATTGACGAAGGAATCCGCAGGCAGCTTCTTCTTGCTTTGACCGAAG L D F S - L T K E S A G S F F L L - P K S T F H N - R R N P Q A A S S C F D R R A R L F I I D E G I R R Q L L L A L T E . . . : . . . 97510 ACTCCAAGCTTCACATTGAAGAA : GTAGTTGATGTATATAGACTGCTTGAAGACCAGGTAG T P S F T L K K : - L M Y I D C L K T R - L Q A S H - R : S S - C I - T A - R P G R D S K L H I E E : V V D V Y R L L E D Q V . . . . : . . 97645 ATGTACCTTCAATGGCTATGGAACTAGCCCAAG : ACTTACCATCCGTTGCTCGAGATATAT M Y L Q W L W N - P K : T Y H P L L E I Y C T F N G Y G T S P R : L T I R C S R Y I D V P S M A M E L A Q : D L P S V A R D I . . . . . . 97834 TGCTTTCATGGAGTTCCTCTGTATTATCAGACAGATAGTCCCCTTCTGGTGCATTCCTCG C F H G V P L Y Y Q T D S P L L V H S S A F M E F L C I I R Q I V P F W C I P R L L S W S S S V L S D R - S P S G A F L . . . . . . 97894 ACCAATGATATTTCAATCTGTTATCATGATGTAAAGTTGAGTTCTCCCTCGCCCCTTCCC T N D I S I C Y H D V K L S S P S P L P P M I F Q S V I M M - S - V L P R P F P D Q - Y F N L L S - C K V E F S L A P S . . . . . . 97954 CCTTCTTTCCCTTTATTTCTTCGGCTCTTGATCACATTTTTCCCATGGGATCAAGGTGCA P S F P L F L R L L I T F F P W D Q G A L L S L Y F F G S - S H F S H G I K V Q P F F P F I S S A L D H I F P M G S R C . . . . . . 98014 ATCTAGAATCTGCAAAGTCTTGGGTGAATATATTTGTATAGTATATGGTGAAGCGGTAAA I - N L Q S L G - I Y L Y S I W - S G K S R I C K V L G E Y I C I V Y G E A V K N L E S A K S W V N I F V - Y M V K R - . . . . . . 98074 GAGATGAAAGTAGTGTAAAATGAGAAATTCATGTCAATAGCACACATTTCCACAGGTATG E M K V V - N E K F M S I A H I S T G M R - K - C K M R N S C Q - H T F P Q V - R D E S S V K - E I H V N S T H F H R Y . . . . . . 98134 ATGCAACAAACCTATAGAAAAGATAGCATCATGTATAGCAGTGATTCTCATACAGTTCTT M Q Q T Y R K D S I M Y S S D S H T V L C N K P I E K I A S C I A V I L I Q F L D A T N L - K R - H H V - Q - F S Y S S . . 98194 GTTTGCTGAAAA V C - K F A E C L L K Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0336I24.1+_PGL-12_AGS-2_PPS_1 (97225 97277,97385 97532,97608 97677,97807 97871) (frame '0'; 333 bp, 111 residues) 1 KENVTKLSKN PAFRGNNRGA SNHLKNEQKL DLTDTIKDGA RLFIIDEGIR RQLLLALTED 61 SKLHIEEVVD VYRLLEDQVD VPSMAMELAQ DLPSVARDIL LSWSSSVLSD R- PGL 13 (- strand): 115902 101786 AGS-1 (112171 112118,111361 111273,111158 111062,109368 109282,107851 107767,107122 107028,106711 106679,106597 106511,106309 106217,105726 105634,105486 105265,104140 104069,103050 102979,102087 101786) SCR (e 0.944 d 0.685 a 0.997,e 0.921 d 0.999 a 0.914,e 0.907 d 0.903 a 0.977,e 0.954 d 0.991 a 0.997,e 0.941 d 0.846 a 0.849,e 0.926 d 1.000 a 0.993,e 0.909 d 0.997 a 0.989,e 1.000 d 0.219 a 0.985,e 0.989 d 0.998 a 0.948,e 1.000 d 0.990 a 0.992,e 1.000 d 0.999 a 0.991,e 1.000 d 0.988 a 1.000,e 1.000 d 0.974 a 0.999,e 0.992) Exon 1 112171 112118 ( 54 n); score: 0.944 Intron 1 112117 111362 ( 756 n); Pd: 0.685 Pa: 0.997 Exon 2 111361 111273 ( 89 n); score: 0.921 Intron 2 111272 111159 ( 114 n); Pd: 0.999 Pa: 0.914 Exon 3 111158 111062 ( 97 n); score: 0.907 Intron 3 111061 109369 (1693 n); Pd: 0.903 Pa: 0.977 Exon 4 109368 109282 ( 87 n); score: 0.954 Intron 4 109281 107852 (1430 n); Pd: 0.991 Pa: 0.997 Exon 5 107851 107767 ( 85 n); score: 0.941 Intron 5 107766 107123 ( 644 n); Pd: 0.846 Pa: 0.849 Exon 6 107122 107028 ( 95 n); score: 0.926 Intron 6 107027 106712 ( 316 n); Pd: 1.000 Pa: 0.993 Exon 7 106711 106679 ( 33 n); score: 0.909 Intron 7 106678 106598 ( 81 n); Pd: 0.997 Pa: 0.989 Exon 8 106597 106511 ( 87 n); score: 1.000 Intron 8 106510 106310 ( 201 n); Pd: 0.219 Pa: 0.985 Exon 9 106309 106217 ( 93 n); score: 0.989 Intron 9 106216 105727 ( 490 n); Pd: 0.998 Pa: 0.948 Exon 10 105726 105634 ( 93 n); score: 1.000 Intron 10 105633 105487 ( 147 n); Pd: 0.990 Pa: 0.992 Exon 11 105486 105265 ( 222 n); score: 1.000 Intron 11 105264 104141 (1124 n); Pd: 0.999 Pa: 0.991 Exon 12 104140 104069 ( 72 n); score: 1.000 Intron 12 104068 103051 (1018 n); Pd: 0.988 Pa: 1.000 Exon 13 103050 102979 ( 72 n); score: 1.000 Intron 13 102978 102088 ( 891 n); Pd: 0.974 Pa: 0.999 Exon 14 102087 101786 ( 302 n); score: 0.992 PGS (106288 106217,105726 105634,105486 105265,104140 104069,103050 102979,102087 101786) SGN-E540531- PGS (106573 106511,106309 106217,105726 105634,105486 105265,104140 104069,103050 102979,102087 101909) SGN-E540534+ PGS (105666 105634,105486 105265,104140 104069,103050 102979,102087 101960) SGN-E305449+ PGS (105386 105265,104140 104069,103050 102979,102087 101989) SGN-E231294+ PGS (105693 105634,105486 105265,104140 104069,103050 102979,102087 101996) SGN-E246513+ PGS (106260 106217,105726 105634,105486 105265,104140 104069,103050 102979,102087 102044) SGN-E341553+ PGS (106572 106511,106309 106217,105726 105634,105486 105265,104140 104069,103050 103004) SGN-E290606+ PGS (109368 109282,107851 107767,107122 107028,106711 106679,106597 106511,106309 106217,105726 105634,105486 105265,104140 104111) SGN-E378170+ PGS (106711 106679,106597 106511,106309 106217,105726 105634,105486 105305) SGN-E207964+ PGS (107122 107028,106711 106679,106597 106511,106309 106217,105726 105634,105486 105339) SGN-E319713+ PGS (109368 109282,107851 107767,107122 107028,106711 106691) SGN-E212903+ PGS (112171 112118,111361 111273,111158 111062,109368 109282,107851 107767,107122 107028) SGN-E258246+ PGS (111359 111273,111158 111062,109368 109282,107851 107767,107122 107043) SGN-E325168+ PGS (112171 112118,111361 111273,111158 111095) SGN-E258542+ 3-phase translation of AGS-1 (-strand): . . . . . . : 112171 GAAAGCTTGCAAAGAGTTTACGGAATATCTTATCCAGATAAGAAACAGTTGAAG : GAATAT E S L Q R V Y G I S Y P D K K Q L K : E Y K A C K E F T E Y L I Q I R N S - R : N I K L A K S L R N I L S R - E T V E : G I . . . . . . 111355 CTGGCAATGCTGGAGGAAGCAAAGAAATACGATCACAGAGAGCTGACTAAGAAGCAGGAG L A M L E E A K K Y D H R E L T K K Q E W Q C W R K Q R N T I T E S - L R S R S S G N A G G S K E I R S Q R A D - E A G . . . : . . . 111295 CTTTTCTTCTTTCATCCATTAAG : CCCTGGAAGTTGTTTCTTTCTTCCACATGGTGCGCGA L F F F H P L S : P G S C F F L P H G A R F S S F I H - : A L E V V S F F H M V R E A F L L S S I K : P W K L F L S S T W C A . . . . . . : 111121 GTTTGCAACAAATTGCTGGAGTTCATACGGAGTCAGTATTGGAAGAGAGGCTACGAGGAG : V C N K L L E F I R S Q Y W K R G Y E E : F A T N C W S S Y G V S I G R E A T R R : S L Q Q I A G V H T E S V L E E R L R G : . . . . . . 109368 GTTTGGAGTCCAAATATGTACAATATGCAGTTATGGGAAACTTCTGGTCATGCTGCAAAT V W S P N M Y N M Q L W E T S G H A A N F G V Q I C T I C S Y G K L L V M L Q I G L E S K Y V Q Y A V M G N F W S C C K . . . : . . . 109308 TACAAGGAGAACATGTTTGTGTTTGAG : ATTGAAAAGCAAGAATTTGGGCTGAAGCCAATG Y K E N M F V F E : I E K Q E F G L K P M T R R T C L C L R : L K S K N L G - S Q - L Q G E H V C V - : D - K A R I W A E A N . . . . . . : 107818 AACTGCCCAGGTCATTGTTTAATATTTGATCACAGGGTTCGTTCCTACAGGG : AACTACCA N C P G H C L I F D H R V R S Y R : E L P T A Q V I V - Y L I T G F V P T G : N Y H E L P R S L F N I - S Q G S F L Q G : T T . . . . . . 107114 CTTCGTCTGGCTGACTTTGGGGTTCTGCACAGGAATGAGGCCAGTGGTGCACTTACTGGC L R L A D F G V L H R N E A S G A L T G F V W L T L G F C T G M R P V V H L L A T S S G - L W G S A Q E - G Q W C T Y W . . . : . . . : 107054 TTAACACGTGTCAGGAGATTTCAGCAG : GATGATGCACACATCTTTTGCAGAGAGTCACAG : L T R V R R F Q Q : D D A H I F C R E S Q : - H V S G D F S R : M M H T S F A E S H R : L N T C Q E I S A : G - C T H L L Q R V T : . . . . . . 106597 ATTAAGGATGAAGTCAAGGGCGTCTTAGAGTTCATCAGCTATGTGTATAAGATATTTGGT I K D E V K G V L E F I S Y V Y K I F G L R M K S R A S - S S S A M C I R Y L V D - G - S Q G R L R V H Q L C V - D I W . . . : . . . 106537 TTCACTTTTGACCTGAAGTTATCAACA : AGGCCTGAAAAATTTCTTGGAGACATAGCAACT F T F D L K L S T : R P E K F L G D I A T S L L T - S Y Q Q : G L K N F L E T - Q L F H F - P E V I N : K A - K I S W R H S N . . . . . . : 106276 TGGGTAAAGGCTGAAGCTGCTCTTTCTGAAGCATTGAACGAGCATGGGAAGCCCTGGGAG : W V K A E A A L S E A L N E H G K P W E : G - R L K L L F L K H - T S M G S P G R : L G K G - S C S F - S I E R A W E A L G : . . . . . . 105726 ATCAATGAAGGAGACGGAGCATTTTATGGCCCAAAAATTGATATAAGTGTTTCTGATGCA I N E G D G A F Y G P K I D I S V S D A S M K E T E H F M A Q K L I - V F L M Q D Q - R R R S I L W P K N - Y K C F - C . . . . : . . 105666 ATGAAGAGGAAATTCCAGTGTGCGACATTGCAG : CTTGATTTCCAACTCCCTCAACGTTTC M K R K F Q C A T L Q : L D F Q L P Q R F - R G N S S V R H C S : L I S N S L N V S N E E E I P V C D I A : A - F P T P S T F . . . . . . 105459 AACCTATCATACTCAGCAGAAGATGAAAGTAAGAGAGAGAGACCAGTTATGATACATAGA N L S Y S A E D E S K R E R P V M I H R T Y H T Q Q K M K V R E R D Q L - Y I E Q P I I L S R R - K - E R E T S Y D T - . . . . . . 105399 GCGATCCTTGGGTCAGTTGAGCGTATGTTCGCCATTCTTTTGGAGCATTTCAAAGGGAAA A I L G S V E R M F A I L L E H F K G K R S L G Q L S V C S P F F W S I S K G N S D P W V S - A Y V R H S F G A F Q R E . . . . . . 105339 TGGCCTTTCTGGCTTAGTCCACGTCAAGCTATGGTCTGCCCTGTTTCTGACAAATCGCAG W P F W L S P R Q A M V C P V S D K S Q G L S G L V H V K L W S A L F L T N R S M A F L A - S T S S Y G L P C F - Q I A . . : . . . . 105279 TCATATGCACTTAAG : CTCCGGGAGCAGATACATGATGCTGGTTATTACGTTGATGTTGAT S Y A L K : L R E Q I H D A G Y Y V D V D H M H L S : S G S R Y M M L V I T L M L I V I C T - : A P G A D T - C W L L R - C - . . . : . . . 104095 ACAAGTGACAGGACAATTCAGAAAAAG : GTACGAGAGGCTCAAGTGGCACAATATAACTAT T S D R T I Q K K : V R E A Q V A Q Y N Y Q V T G Q F R K R : Y E R L K W H N I T I Y K - Q D N S E K : G T R G S S G T I - L . . . . : . . 103017 ATTCTGGTTGTTGGAGAGGCTGAAGCCAGTAGTGGGCAG : GTGAGTGTTCGAGTGAGAGAC I L V V G E A E A S S G Q : V S V R V R D F W L L E R L K P V V G R : - V F E - E T Y S G C W R G - S Q - W A : G E C S S E R . . . . . . 102066 AAACCTGATCATCAAGTCATGACGGTTGACGTTCTCCTTGCTCAGTTCAAAGATATGGTT K P D H Q V M T V D V L L A Q F K D M V N L I I K S - R L T F S L L S S K I W L Q T - S S S H D G - R S P C S V Q R Y G . . . . . . 102006 GCATCATTTCAGTAAGAGTCGCCACTTCTCTTGCATTATATCCCCGAGGGCTCTGGTGAG A S F Q - E S P L L L H Y I P E G S G E H H F S K S R H F S C I I S P R A L V S C I I S V R V A T S L A L Y P R G L W - . . . . . . 101946 CGCAGCACTCTAGACTCACGGACATGGGTTTGAAACCTTGCCGCAGAAGAACGAACTGTT R S T L D S R T W V - N L A A E E R T V A A L - T H G H G F E T L P Q K N E L L A Q H S R L T D M G L K P C R R R T N C . . . . . . 101886 AATATTTTGATCCATTGTAGCTATTACATTATAAATTCACTAGGATACCTTTTGACTTGA N I L I H C S Y Y I I N S L G Y L L T - I F - S I V A I T L - I H - D T F - L E - Y F D P L - L L H Y K F T R I P F D L . . . . . 101826 ATGGTTTTCAATAGCATGTTAGCATCTTATTCTTTCTTCTA M V F N S M L A S Y S F F W F S I A C - H L I L S S N G F Q - H V S I L F F L L Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0336I24.1-_PGL-13_AGS-1_PPS_1 (112171 112118,111361 111273,111158 111062,109368 109282,107851 107767,107122 107028,106711 106679,106597 106511,106309 106217,105726 105634,105486 105265,104140 104069,103050 102979,102087 101992) (frame '1'; 1272 bp, 424 residues) 1 ESLQRVYGIS YPDKKQLKEY LAMLEEAKKY DHRELTKKQE LFFFHPLSPG SCFFLPHGAR 61 VCNKLLEFIR SQYWKRGYEE VWSPNMYNMQ LWETSGHAAN YKENMFVFEI EKQEFGLKPM 121 NCPGHCLIFD HRVRSYRELP LRLADFGVLH RNEASGALTG LTRVRRFQQD DAHIFCRESQ 181 IKDEVKGVLE FISYVYKIFG FTFDLKLSTR PEKFLGDIAT WVKAEAALSE ALNEHGKPWE 241 INEGDGAFYG PKIDISVSDA MKRKFQCATL QLDFQLPQRF NLSYSAEDES KRERPVMIHR 301 AILGSVERMF AILLEHFKGK WPFWLSPRQA MVCPVSDKSQ SYALKLREQI HDAGYYVDVD 361 TSDRTIQKKV REAQVAQYNY ILVVGEAEAS SGQVSVRVRD KPDHQVMTVD VLLAQFKDMV 421 ASFQ- AGS-2 (115902 115673,115089 114852,114725 114666,113483 113394,112620 112546,112424 112412) SCR (e 1.000 d 1.000 a 1.000,e 1.000 d 0.804 a 0.898,e 1.000 d 0.867 a 0.986,e 1.000 d 0.990 a 0.911,e 0.968 d 0.759 a 0.960,e 1.000) Exon 1 115902 115673 ( 230 n); score: 1.000 Intron 1 115672 115090 ( 583 n); Pd: 1.000 Pa: 1.000 Exon 2 115089 114852 ( 238 n); score: 1.000 Intron 2 114851 114726 ( 126 n); Pd: 0.804 Pa: 0.898 Exon 3 114725 114666 ( 60 n); score: 1.000 Intron 3 114665 113484 (1182 n); Pd: 0.867 Pa: 0.986 Exon 4 113483 113394 ( 90 n); score: 1.000 Intron 4 113393 112621 ( 773 n); Pd: 0.990 Pa: 0.911 Exon 5 112620 112546 ( 75 n); score: 0.968 Intron 5 112545 112425 ( 121 n); Pd: 0.759 Pa: 0.960 Exon 6 112424 112412 ( 13 n); score: 1.000 PGS (115785 115673,115089 114852,114725 114666,113483 113394,112620 112546,112424 112412) SGN-E342692+ PGS (115089 114852,114725 114666,113483 113394,112620 112546) SGN-E336392+ PGS (115764 115673,115089 114852,114725 114666,113483 113394,112620 112559) SGN-E312208+ PGS (115824 115673,115089 114852,114725 114666,113483 113423) SGN-E331229+ PGS (115893 115673,115089 114852,114725 114703) SGN-E330928+ PGS (115902 115673,115089 114852,114725 114717) SGN-E301951+ 3-phase translation of AGS-2 (-strand): . . . . . . 115902 TGGCTCCCGTAATCATCAGTATAAAACCGCCGTCTTCTGCCGTCGAAACTCCTTTAACTC W L P - S S V - N R R L L P S K L L - L G S R N H Q Y K T A V F C R R N S F N S A P V I I S I K P P S S A V E T P L T . . . . . . 115842 CGCCGCCGCCGCTTCTTCTCATCTCCGCCAGCAGAAGCTCCAATGGGTACCGCCTACCCC R R R R F F S S P P A E A P M G T A Y P A A A A S S H L R Q Q K L Q W V P P T P P P P P L L L I S A S R S S N G Y R L P . . . . . . 115782 AGAGACGAAAATTATCTGGAAATTGTTGTTCCTAGACGTATTGCACTCTTCGTATCTATT R D E N Y L E I V V P R R I A L F V S I E T K I I W K L L F L D V L H S S Y L F Q R R K L S G N C C S - T Y C T L R I Y . . . . . : . 115722 CAAAACCAGCAACGCCTTCAGCGCCTTTCACTCTCCCCTGATCCTATCAA : GATTGAATTA Q N Q Q R L Q R L S L S P D P I K : I E L K T S N A F S A F H S P L I L S : R L N Y S K P A T P S A P F T L P - S Y Q : D - I . . . . . . 115079 CCGAATGGAACTGTGAAGGAGGGGAAGAAATGGAATACAACGCCTTTGGATATAGCAAAG P N G T V K E G K K W N T T P L D I A K R M E L - R R G R N G I Q R L W I - Q R T E W N C E G G E E M E Y N A F G Y S K . . . . . . 115019 GAGATATCGAAGAGCTTGGGCTCCAATGCTTTGATAGCAAAGGTGAATGGGGTGCTTTGG E I S K S L G S N A L I A K V N G V L W R Y R R A W A P M L - - Q R - M G C F G G D I E E L G L Q C F D S K G E W G A L . . . . . . 114959 GATTTGTTGAGGCCATTGGAGAGTGACTGTAAGCTCGAGCTCTTCACTTTTGACAGTGAC D L L R P L E S D C K L E L F T F D S D I C - G H W R V T V S S S S S L L T V T G F V E A I G E - L - A R A L H F - Q - . . . . . : . 114899 GAGGGTCGCGACACGTTTTGGCACTCGAGTGCGCACATTCTTGGCGAG : TCATTGGAGAGG E G R D T F W H S S A H I L G E : S L E R R V A T R F G T R V R T F L A S : H W R G R G S R H V L A L E C A H S W R : V I G E . . . . . : . 114713 AAATATGGCTGCAAATTGTGTATTGGACCTTGTACAACAAGAGGAGAG : GGTTTCTATTAT K Y G C K L C I G P C T T R G E : G F Y Y N M A A N C V L D L V Q Q E E R : V S I M E I W L Q I V Y W T L Y N K R R : G F L L . . . . . . 113471 GATGCCTTTTACGGTGATCTGGGGTTAAATGAGGATCATTTTAAAGGGATTGAGGCAGAG D A F Y G D L G L N E D H F K G I E A E M P F T V I W G - M R I I L K G L R Q R - C L L R - S G V K - G S F - R D - G R . . : . . . . 113411 GCAGCAAAAGCTGTATCG : GAGAAACAGCCTTTTGAACGCATTGAAGTTTCACGGCAACAA A A K A V S : E K Q P F E R I E V S R Q Q Q Q K L Y R : R N S L L N A L K F H G N K G S K S C I : G E T A F - T H - S F T A T . . . . : . 112578 GCTCTTGATATGTTCTCTGAAAATAGGTTTAAG : GTTGAAATCATTA A L D M F S E N R F K : V E I I L L I C S L K I G L R : L K S L S S - Y V L - K - V - : G - N H Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0336I24.1-_PGL-13_AGS-2_PPS_1 (115845 115673,115089 114852,114725 114666,113483 113394,112620 112546,112424 112413) (frame '1'; 648 bp, 216 residues) 1 LRRRRFFSSP PAEAPMGTAY PRDENYLEIV VPRRIALFVS IQNQQRLQRL SLSPDPIKIE 61 LPNGTVKEGK KWNTTPLDIA KEISKSLGSN ALIAKVNGVL WDLLRPLESD CKLELFTFDS 121 DEGRDTFWHS SAHILGESLE RKYGCKLCIG PCTTRGEGFY YDAFYGDLGL NEDHFKGIEA 181 EAAKAVSEKQ PFERIEVSRQ QALDMFSENR FKVEII PGL 14 (+ strand): 125150 126487 AGS-1 (125150 125259,125598 125689,125932 126285,126367 126487) SCR (e 0.718 d 0.836 a 0.000,e 0.576 d 0.000 a 0.000,e 0.835 d 0.000 a 0.000,e 0.843) Exon 1 125150 125259 ( 110 n); score: 0.718 Intron 1 125260 125597 ( 338 n); Pd: 0.836 Pa: 0.000 Exon 2 125598 125689 ( 92 n); score: 0.576 Intron 2 125690 125931 ( 242 n); Pd: 0.000 Pa: 0.000 Exon 3 125932 126285 ( 354 n); score: 0.835 Intron 3 126286 126366 ( 81 n); Pd: 0.000 Pa: 0.000 Exon 4 126367 126487 ( 121 n); score: 0.843 PGS (125150 125259,125598 125689,125932 126285,126367 126487) SGN-E547025+ 3-phase translation of AGS-1 (+strand): . . . . . . 125150 TTTTCCCATCTATATAACTAAATTCAATTACTTTGTGTATATATTTATATAAAAAAAATT F S H L Y N - I Q L L C V Y I Y I K K I F P I Y I T K F N Y F V Y I F I - K K L F P S I - L N S I T L C I Y L Y K K N . . . . . : . 125210 AATGAGTCTTTAATATACAATCCCCTACTACCAGCTATTAAAACAGACAT : ATATTCAATA N E S L I Y N P L L P A I K T D I : Y S I M S L - Y T I P Y Y Q L L K Q T : Y I Q - - - V F N I Q S P T T S Y - N R H : I F N . . . . . . 125608 ATTTGTAAATAACTACTACAATATACAAAATTATAATCACATATGATATTTTCCCATCTA I C K - L L Q Y T K L - S H M I F S H L F V N N Y Y N I Q N Y N H I - Y F P I Y N L - I T T T I Y K I I I T Y D I F P S . . . : . . . 125668 TATAACTAAATCCAATTACTTT : TAAACATGCAATATACTATATACAATTACTAAACATGG Y N - I Q L L : L N M Q Y T I Y N Y - T W I T K S N Y F : - T C N I L Y T I T K H G I - L N P I T F : K H A I Y Y I Q L L N M . . . . . . 125970 AATATACTATATACAATACTTAATTTAATATTTTTTGTATATTGACAACTAATTAACCAA N I L Y T I L N L I F F V Y - Q L I N Q I Y Y I Q Y L I - Y F L Y I D N - L T K E Y T I Y N T - F N I F C I L T T N - P . . . . . . 126030 AAAATTGTATCTAACTTTGTGTTTTAAGACACTACCTCGTGATTATGAAGTTCTTCAGAT K I V S N F V F - D T T S - L - S S S D K L Y L T L C F K T L P R D Y E V L Q I K N C I - L C V L R H Y L V I M K F F R . . . . . . 126090 CCGACAACTTCAGAAGCATTTTCCTCTGATTCAATGTTTACATCTTTCCTCTTTCTTGTT P T T S E A F S S D S M F T S F L F L V R Q L Q K H F P L I Q C L H L S S F L F S D N F R S I F L - F N V Y I F P L S C . . . . . . 126150 CCTTGTACAATTTTAATGCCTCTAGCTTTGACATTTTTAATAAGTTGTTGAACTGCCATA P C T I L M P L A L T F L I S C - T A I L V Q F - C L - L - H F - - V V E L P - S L Y N F N A S S F D I F N K L L N C H . . . . . . 126210 GGGTCGTTTTTTTCCTTTGATCTCAGCTCTTCCATGGTTTGTTCTTGTATAACTTGTTTT G S F F S F D L S S S M V C S C I T C F G R F F P L I S A L P W F V L V - L V L R V V F F L - S Q L F H G L F L Y N L F . . : . . . . 126270 GATTTTCCCAAAGACC : CTCTGGTAATCCTCAAAGATGAAGATGATTCATTCATTGTTTGA D F P K D : P L V I L K D E D D S F I V - I F P K T : L W - S S K M K M I H S L F D - F S Q R P : S G N P Q R - R - F I H C L . . . . . . 126411 CCAATTTTAGATCTATCAAGAACAAAAAATCGATTATTTCATCAAAATATATGAAAAAAA P I L D L S R T K N R L F H Q N I - K K Q F - I Y Q E Q K I D Y F I K I Y E K N T N F R S I K N K K S I I S S K Y M K K . . 126471 TAATAAACAGAACACAT - - T E H N K Q N T I I N R T H Maximal non-overlapping open reading frames (>= 64 codons): none PGL 15 (+ strand): 131237 131910 AGS-1 (131237 131910) SCR (e 0.999) Exon 1 131237 131910 ( 674 n); score: 0.999 PGS (131237 131910) SGN-E371940+ PGS (131237 131831) SGN-E287227+ 3-phase translation of AGS-1 (+strand): . . . . . . 131237 GACAGTATCCTTTGTTTTTTGTTACCATGCTTCACAATATATACTGGCTTTGACCTCTTA D S I L C F L L P C F T I Y T G F D L L T V S F V F C Y H A S Q Y I L A L T S - Q Y P L F F V T M L H N I Y W L - P L . . . . . . 131297 ACAGGGAAAAAGAGCTAGTTAGGCTTTTCGTTTGCTGGCATTTATTTTTAGCCTGTATGC T G K K S - L G F S F A G I Y F - P V C Q G K R A S - A F R L L A F I F S L Y A N R E K E L V R L F V C W H L F L A C M . . . . . . 131357 ATATTTTGTGCCTCCAATGCTGTAAAAACTTGCTAAGAAAAATTGAACTAGCCCAGTGCA I F C A S N A V K T C - E K L N - P S A Y F V P P M L - K L A K K N - T S P V Q H I L C L Q C C K N L L R K I E L A Q C . . . . . . 131417 ACCTATTCTTTCTGCTTGTAGTTTTGTGTTCTTGCTTTTAGTCATGTTGGTGAGTTGATG T Y S F C L - F C V L A F S H V G E L M P I L S A C S F V F L L L V M L V S - C N L F F L L V V L C S C F - S C W - V D . . . . . . 131477 CTAACTTTAACTAAAAATAAGCTGGTTCAACTCAAGCAACAAGATTGACAGCAGCTAGGC L T L T K N K L V Q L K Q Q D - Q Q L G - L - L K I S W F N S S N K I D S S - A A N F N - K - A G S T Q A T R L T A A R . . . . . . 131537 AGATTGGTGAAATAGCCAAATCACATCCTCAGGACCTAAACTCTTTGTTGAGTAAGGTAT R L V K - P N H I L R T - T L C - V R Y D W - N S Q I T S S G P K L F V E - G M Q I G E I A K S H P Q D L N S L L S K V . . . . . . 131597 GTCTTTCTGTGCAGTTCTTCTCTAGTTATATCAAAGTTCGCATTTTTTTTTCTCTGTGTT V F L C S S S L V I S K F A F F F L C V S F C A V L L - L Y Q S S H F F F S V L C L S V Q F F S S Y I K V R I F F S L C . . . . . . 131657 GCGGCTATACACTGGTTATGTGTGTTGGAGTGGGAAGTGGTAACATTTATCAATTTGAAG A A I H W L C V L E W E V V T F I N L K R L Y T G Y V C W S G K W - H L S I - R C G Y T L V M C V G V G S G N I Y Q F E . . . . . . 131717 ATAGAAGTTTCGAAAAAGAAAATCCTTATTTTTCCTGAGTTATGTGCATTAAATCTATGA I E V S K K K I L I F P E L C A L N L - - K F R K R K S L F F L S Y V H - I Y E D R S F E K E N P Y F S - V M C I K S M . . . . . . 131777 AAGTTTTACCTTTGAAATTTTTTCTGCAAGTGTGAGAACTAATTTCAGCAAATTTGTTTT K F Y L - N F F C K C E N - F Q Q I C F S F T F E I F S A S V R T N F S K F V F K V L P L K F F L Q V - E L I S A N L F . . . . . . 131837 TTTAAGGAAGTAATTCTACAGAACATTTCATAGTGATAGGAGTGGTTAATTAAATGAGTA F K E V I L Q N I S - - - E W L I K - V L R K - F Y R T F H S D R S G - L N E Y F - G S N S T E H F I V I G V V N - M S . . 131897 CTTTGCTGGTCAAA L C W S F A G Q T L L V K Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0336I24.1+_PGL-15_AGS-1_PPS_1 (131497 131754) (frame '0'; 255 bp, 85 residues) 1 AGSTQATRLT AARQIGEIAK SHPQDLNSLL SKVCLSVQFF SSYIKVRIFF SLCCGYTLVM 61 CVGVGSGNIY QFEDRSFEKE NPYFS- 3-phase translation of AGS-1 (-strand): . . . . . . 131910 TTTGACCAGCAAAGTACTCATTTAATTAACCACTCCTATCACTATGAAATGTTCTGTAGA F D Q Q S T H L I N H S Y H Y E M F C R L T S K V L I - L T T P I T M K C S V E - P A K Y S F N - P L L S L - N V L - . . . . . . 131850 ATTACTTCCTTAAAAAAACAAATTTGCTGAAATTAGTTCTCACACTTGCAGAAAAAATTT I T S L K K Q I C - N - F S H L Q K K F L L P - K N K F A E I S S H T C R K N F N Y F L K K T N L L K L V L T L A E K I . . . . . . 131790 CAAAGGTAAAACTTTCATAGATTTAATGCACATAACTCAGGAAAAATAAGGATTTTCTTT Q R - N F H R F N A H N S G K I R I F F K G K T F I D L M H I T Q E K - G F S F S K V K L S - I - C T - L R K N K D F L . . . . . . 131730 TTCGAAACTTCTATCTTCAAATTGATAAATGTTACCACTTCCCACTCCAACACACATAAC F E T S I F K L I N V T T S H S N T H N S K L L S S N - - M L P L P T P T H I T F R N F Y L Q I D K C Y H F P L Q H T - . . . . . . 131670 CAGTGTATAGCCGCAACACAGAGAAAAAAAAATGCGAACTTTGATATAACTAGAGAAGAA Q C I A A T Q R K K N A N F D I T R E E S V - P Q H R E K K M R T L I - L E K N P V Y S R N T E K K K C E L - Y N - R R . . . . . . 131610 CTGCACAGAAAGACATACCTTACTCAACAAAGAGTTTAGGTCCTGAGGATGTGATTTGGC L H R K T Y L T Q Q R V - V L R M - F G C T E R H T L L N K E F R S - G C D L A T A Q K D I P Y S T K S L G P E D V I W . . . . . . 131550 TATTTCACCAATCTGCCTAGCTGCTGTCAATCTTGTTGCTTGAGTTGAACCAGCTTATTT Y F T N L P S C C Q S C C L S - T S L F I S P I C L A A V N L V A - V E P A Y F L F H Q S A - L L S I L L L E L N Q L I . . . . . . 131490 TTAGTTAAAGTTAGCATCAACTCACCAACATGACTAAAAGCAAGAACACAAAACTACAAG L V K V S I N S P T - L K A R T Q N Y K - L K L A S T H Q H D - K Q E H K T T S F S - S - H Q L T N M T K S K N T K L Q . . . . . . 131430 CAGAAAGAATAGGTTGCACTGGGCTAGTTCAATTTTTCTTAGCAAGTTTTTACAGCATTG Q K E - V A L G - F N F S - Q V F T A L R K N R L H W A S S I F L S K F L Q H W A E R I G C T G L V Q F F L A S F Y S I . . . . . . 131370 GAGGCACAAAATATGCATACAGGCTAAAAATAAATGCCAGCAAACGAAAAGCCTAACTAG E A Q N M H T G - K - M P A N E K P N - R H K I C I Q A K N K C Q Q T K S L T S G G T K Y A Y R L K I N A S K R K A - L . . . . . . 131310 CTCTTTTTCCCTGTTAAGAGGTCAAAGCCAGTATATATTGTGAAGCATGGTAACAAAAAA L F F P V K R S K P V Y I V K H G N K K S F S L L R G Q S Q Y I L - S M V T K N A L F P C - E V K A S I Y C E A W - Q K . . 131250 CAAAGGATACTGTC Q R I L K G Y C T K D T V Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0336I24.1-_PGL-15_AGS-1_PPS_1 (131781 131572) (frame '1'; 207 bp, 69 residues) 1 NFHRFNAHNS GKIRIFFFET SIFKLINVTT SHSNTHNQCI AATQRKKNAN FDITREELHR 61 KTYLTQQRV- PGL 16 (+ strand): 132639 133344 AGS-1 (132639 133344) SCR (e 0.997) Exon 1 132639 133344 ( 706 n); score: 0.997 PGS (132639 133344) SGN-E371939- 3-phase translation of AGS-1 (+strand): . . . . . . 132639 TCCTACCCAAACAATTCTAACCTTAAAATATATTAGAAAACATTAAGAAAGTACCTAGTT S Y P N N S N L K I Y - K T L R K Y L V P T Q T I L T L K Y I R K H - E S T - L L P K Q F - P - N I L E N I K K V P S . . . . . . 132699 AATAATTTCTGCATAATTAATGTTGACAATTTTTTTTTGTAAATTTGTTTACAACGTTGG N N F C I I N V D N F F L - I C L Q R W I I S A - L M L T I F F C K F V Y N V G - - F L H N - C - Q F F F V N L F T T L . . . . . . 132759 AAACTTAAAATTATAGCAAATTAAACTTGACCCGAGAGCAATACTCAATGAAGATAAAAA K L K I I A N - T - P E S N T Q - R - K N L K L - Q I K L D P R A I L N E D K K E T - N Y S K L N L T R E Q Y S M K I K . . . . . . 132819 ACAAGACAAACCCTAAAACCATTAATAGATGCTTTAATGGTCGGTCATGTAATAGAAATG T R Q T L K P L I D A L M V G H V I E M Q D K P - N H - - M L - W S V M - - K - N K T N P K T I N R C F N G R S C N R N . . . . . . 132879 ATATTTCTCTTCTTTTTTCCTCTTGCCTCCTTTATCAAATTCTATTCTGCTTGAGCTTAC I F L F F F P L A S F I K F Y S A - A Y Y F S S F F L L P P L S N S I L L E L T D I S L L F S S C L L Y Q I L F C L S L . . . . . . 132939 TGCTCAGTTCTTTCAAAAGGATGGCAACACAGTAGGAACTATGGATAGCTGGATAAAATT C S V L S K G W Q H S R N Y G - L D K I A Q F F Q K D G N T V G T M D S W I K F L L S S F K R M A T Q - E L W I A G - N . . . . . . 132999 TGGAAATATCTAAGAAATTATTTTCCAAGAAAGCAGTGGAGGGTTTGCGAGATGGTTATT W K Y L R N Y F P R K Q W R V C E M V I G N I - E I I F Q E S S G G F A R W L L L E I S K K L F S K K A V E G L R D G Y . . . . . . 133059 GCTTAAAAGTGGGTTGTTGGGTTGCTCATTCTTCAGTAGAACAACTGTTAAAAAAAACAA A - K W V V G L L I L Q - N N C - K K Q L K S G L L G C S F F S R T T V K K N N C L K V G C W V A H S S V E Q L L K K T . . . . . . 133119 TTGCAATAATAGAATAGGAGGAAGAAGACTGAGAGAGAAGAGTGTAGGGAAGCCGGAGAA L Q - - N R R K K T E R E E C R E A G E C N N R I G G R R L R E K S V G K P E K I A I I E - E E E D - E R R V - G S R R . . . . . . 133179 GTGTAGACAAAATGAAAAAATAGAATATTAATAGGAGAGGGAGGGAATTGAAGATTGCAA V - T K - K N R I L I G E G G N - R L Q C R Q N E K I E Y - - E R E G I E D C K S V D K M K K - N I N R R G R E L K I A . . . . . . 133239 GAGAGAGGAGGAATAACCGTATTGGCAAATGATCCACGAAACAATCAACTTACAACTTTT E R G G I T V L A N D P R N N Q L T T F R E E E - P Y W Q M I H E T I N L Q L F R E R R N N R I G K - S T K Q S T Y N F . . . . . 133299 TAATTCCTTTATTAAACCACCTTTTTAAGTCCTTTATAAAACCAAA - F L Y - T T F L S P L - N Q N S F I K P P F - V L Y K T K L I P L L N H L F K S F I K P Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0336I24.1+_PGL-16_AGS-1_PPS_1 (132767 132973) (frame '0'; 204 bp, 68 residues) 1 NYSKLNLTRE QYSMKIKNKT NPKTINRCFN GRSCNRNDIS LLFSSCLLYQ ILFCLSLLLS 61 SFKRMATQ- >C08HBa0336I24.1+_PGL-16_AGS-1_PPS_2 (133012 133209) (frame '2'; 195 bp, 65 residues) 1 EIIFQESSGG FARWLLLKSG LLGCSFFSRT TVKKNNCNNR IGGRRLREKS VGKPEKCRQN 61 EKIEY- 3-phase translation of AGS-1 (-strand): . . . . . . 133344 TTTGGTTTTATAAAGGACTTAAAAAGGTGGTTTAATAAAGGAATTAAAAAGTTGTAAGTT F G F I K D L K R W F N K G I K K L - V L V L - R T - K G G L I K E L K S C K L W F Y K G L K K V V - - R N - K V V S . . . . . . 133284 GATTGTTTCGTGGATCATTTGCCAATACGGTTATTCCTCCTCTCTCTTGCAATCTTCAAT D C F V D H L P I R L F L L S L A I F N I V S W I I C Q Y G Y S S S L L Q S S I - L F R G S F A N T V I P P L S C N L Q . . . . . . 133224 TCCCTCCCTCTCCTATTAATATTCTATTTTTTCATTTTGTCTACACTTCTCCGGCTTCCC S L P L L L I F Y F F I L S T L L R L P P S L S Y - Y S I F S F C L H F S G F P F P P S P I N I L F F H F V Y T S P A S . . . . . . 133164 TACACTCTTCTCTCTCAGTCTTCTTCCTCCTATTCTATTATTGCAATTGTTTTTTTTAAC Y T L L S Q S S S S Y S I I A I V F F N T L F S L S L L P P I L L L Q L F F L T L H S S L S V F F L L F Y Y C N C F F - . . . . . . 133104 AGTTGTTCTACTGAAGAATGAGCAACCCAACAACCCACTTTTAAGCAATAACCATCTCGC S C S T E E - A T Q Q P T F K Q - P S R V V L L K N E Q P N N P L L S N N H L A Q L F Y - R M S N P T T H F - A I T I S . . . . . . 133044 AAACCCTCCACTGCTTTCTTGGAAAATAATTTCTTAGATATTTCCAAATTTTATCCAGCT K P S T A F L E N N F L D I S K F Y P A N P P L L S W K I I S - I F P N F I Q L Q T L H C F L G K - F L R Y F Q I L S S . . . . . . 132984 ATCCATAGTTCCTACTGTGTTGCCATCCTTTTGAAAGAACTGAGCAGTAAGCTCAAGCAG I H S S Y C V A I L L K E L S S K L K Q S I V P T V L P S F - K N - A V S S S R Y P - F L L C C H P F E R T E Q - A Q A . . . . . . 132924 AATAGAATTTGATAAAGGAGGCAAGAGGAAAAAAGAAGAGAAATATCATTTCTATTACAT N R I - - R R Q E E K R R E I S F L L H I E F D K G G K R K K E E K Y H F Y Y M E - N L I K E A R G K K K R N I I S I T . . . . . . 132864 GACCGACCATTAAAGCATCTATTAATGGTTTTAGGGTTTGTCTTGTTTTTTATCTTCATT D R P L K H L L M V L G F V L F F I F I T D H - S I Y - W F - G L S C F L S S L - P T I K A S I N G F R V C L V F Y L H . . . . . . 132804 GAGTATTGCTCTCGGGTCAAGTTTAATTTGCTATAATTTTAAGTTTCCAACGTTGTAAAC E Y C S R V K F N L L - F - V S N V V N S I A L G S S L I C Y N F K F P T L - T - V L L S G Q V - F A I I L S F Q R C K . . . . . . 132744 AAATTTACAAAAAAAAATTGTCAACATTAATTATGCAGAAATTATTAACTAGGTACTTTC K F T K K N C Q H - L C R N Y - L G T F N L Q K K I V N I N Y A E I I N - V L S Q I Y K K K L S T L I M Q K L L T R Y F . . . . . 132684 TTAATGTTTTCTAATATATTTTAAGGTTAGAATTGTTTGGGTAGGA L M F S N I F - G - N C L G R - C F L I Y F K V R I V W V G L N V F - Y I L R L E L F G - Maximal non-overlapping open reading frames (>= 64 codons): >C08HBa0336I24.1-_PGL-16_AGS-1_PPS_1 (133287 133084) (frame '1'; 201 bp, 67 residues) 1 VDCFVDHLPI RLFLLSLAIF NSLPLLLIFY FFILSTLLRL PYTLLSQSSS SYSIIAIVFF 61 NSCSTEE- >C08HBa0336I24.1-_PGL-16_AGS-1_PPS_2 (133205 133008) (frame '2'; 195 bp, 65 residues) 1 YSIFSFCLHF SGFPTLFSLS LLPPILLLQL FFLTVVLLKN EQPNNPLLSN NHLANPPLLS 61 WKIIS- PGL 17 (+ strand): 135876 136227 AGS-1 (135876 136227) SCR (e 0.767) Exon 1 135876 136227 ( 352 n); score: 0.767 PGS (135876 136227) SGN-E538098- PGS (135923 136227) SGN-E538097- 3-phase translation of AGS-1 (+strand): . . . . . . 135876 TGTTATCAAAAGTGAAAAGCGCAAAAAGGCTCTATGGTCCGTGGGGACTTTAAGTGCAAA C Y Q K - K A Q K G S M V R G D F K C K V I K S E K R K K A L W S V G T L S A K L S K V K S A K R L Y G P W G L - V Q . . . . . . 135936 ACACAAATAAAGCGTGGGCTTTGATGAAAAAAGGCGCAAAGGGAGAAAAAAATAGAAATA T Q I K R G L - - K K A Q R E K K I E I H K - S V G F D E K R R K G R K K - K Y N T N K A W A L M K K G A K G E K N R N . . . . . . 135996 TATATGTTTGGTCCAAGGCTAATAATTATAAACATGAATGACAAATATATAACCAAAGAA Y M F G P R L I I I N M N D K Y I T K E I C L V Q G - - L - T - M T N I - P K K I Y V W S K A N N Y K H E - Q I Y N Q R . . . . . . 136056 ATTGAAAAAAATTATGATAAGTGAAATGTCAATTGTTTAGCGTCACTTCTTCCAAAAGAC I E K N Y D K - N V N C L A S L L P K D L K K I M I S E M S I V - R H F F Q K T N - K K L - - V K C Q L F S V T S S K R . . . . . . 136116 TCATTGGCAAGGAAAAGTTTGCCTTAGAACCTTGATGACGACACTAATGCGCACATGAAT S L A R K S L P - N L D D D T N A H M N H W Q G K V C L R T L M T T L M R T - I L I G K E K F A L E P - - R H - C A H E . . . . . . 136176 CTAGGCGAAGCGCTCAACACGTTTTGGGCCTCGCTTCAGGGCTTAAGCGCGC L G E A L N T F W A S L Q G L S A - A K R S T R F G P R F R A - A R S R R S A Q H V L G L A S G L K R Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (-strand): . . . . . . 136227 GCGCGCTTAAGCCCTGAAGCGAGGCCCAAAACGTGTTGAGCGCTTCGCCTAGATTCATGT A R L S P E A R P K T C - A L R L D S C R A - A L K R G P K R V E R F A - I H V A L K P - S E A Q N V L S A S P R F M . . . . . . 136167 GCGCATTAGTGTCGTCATCAAGGTTCTAAGGCAAACTTTTCCTTGCCAATGAGTCTTTTG A H - C R H Q G S K A N F S L P M S L L R I S V V I K V L R Q T F P C Q - V F W C A L V S S S R F - G K L F L A N E S F . . . . . . 136107 GAAGAAGTGACGCTAAACAATTGACATTTCACTTATCATAATTTTTTTCAATTTCTTTGG E E V T L N N - H F T Y H N F F Q F L W K K - R - T I D I S L I I I F F N F F G G R S D A K Q L T F H L S - F F S I S L . . . . . . 136047 TTATATATTTGTCATTCATGTTTATAATTATTAGCCTTGGACCAAACATATATATTTCTA L Y I C H S C L - L L A L D Q T Y I F L Y I F V I H V Y N Y - P W T K H I Y F Y V I Y L S F M F I I I S L G P N I Y I S . . . . . . 135987 TTTTTTTCTCCCTTTGCGCCTTTTTTCATCAAAGCCCACGCTTTATTTGTGTTTTGCACT F F S P F A P F F I K A H A L F V F C T F F L P L R L F S S K P T L Y L C F A L I F F S L C A F F H Q S P R F I C V L H . . . . . . 135927 TAAAGTCCCCACGGACCATAGAGCCTTTTTGCGCTTTTCACTTTTGATAACA - S P H G P - S L F A L F T F D N K V P T D H R A F L R F S L L I T L K S P R T I E P F C A F H F - - Maximal non-overlapping open reading frames (>= 64 codons): none ... finished at: Mon Aug 28 23:11:43 2006