SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 1151 11.5 0.6 0.0 C08HBa0113H06.1 1113 1286 (123707) + Unknown00002 Unknown 4383 4557 (5424) 1 37240 4.8 0.9 0.1 C08HBa0113H06.1 2017 6591 (118402) + Gypsy00074 Gypsy 3829 8441 (5650) 2 529 10.3 8.2 0.0 C08HBa0113H06.1 6520 6616 (118377) + Copia00190 Copia 1 105 (1901) 3 * 1687 16.0 4.0 2.9 C08HBa0113H06.1 6723 7102 (117891) + Unknown00002 Unknown 4590 4973 (5008) 1 509 26.3 1.6 3.8 C08HBa0113H06.1 7752 7937 (117056) C Copia00172 Copia (2452) 4175 3994 4 394 15.8 3.1 12.3 C08HBa0113H06.1 8064 8193 (116800) + LycEPRV_LTR Unknown 4 121 (64) 5 341 17.5 3.9 5.8 C08HBa0113H06.1 10963 11065 (113928) + Copia00108 Copia 489 589 (6840) 6 406 27.0 3.1 5.1 C08HBa0113H06.1 15393 15587 (109406) C Copia00089 Copia (7635) 3821 3631 7 227 19.7 9.1 1.3 C08HBa0113H06.1 15531 15607 (109386) + Gypsy00177 Gypsy 3480 3562 (6743) 8 * 344 27.3 8.2 2.7 C08HBa0113H06.1 15698 15844 (109149) C Gypsy00009 Gypsy (33) 5955 5801 9 3602 5.5 0.0 0.0 C08HBa0113H06.1 16762 17219 (107774) C Copia00107 Copia (2306) 731 274 10 226 22.4 1.7 0.0 C08HBa0113H06.1 22155 22212 (102781) C ALIEN1_CA Unknown (211) 60 2 11 1002 34.2 4.8 2.6 C08HBa0113H06.1 24386 25178 (99815) C PDR1_I Unknown (3) 3609 2800 12 688 30.4 2.8 2.3 C08HBa0113H06.1 25336 25689 (99304) C SC-7 Unknown (1219) 3211 2856 13 701 28.2 3.8 1.5 C08HBa0113H06.1 27130 27524 (97469) + TS2 Unknown 1 3011 (144) 14 3311 12.7 8.3 0.5 C08HBa0113H06.1 31288 31889 (93104) + Gypsy00080 Gypsy 7292 7940 (2006) 15 289 23.3 5.8 0.0 C08HBa0113H06.1 33465 33550 (91443) + Copia00151 Copia 9354 9444 (1317) 16 1101 17.2 7.0 0.2 C08HBa0113H06.1 33925 34240 (90753) + Copia00172 Copia 1103 1487 (5140) 17 344 29.1 7.8 0.6 C08HBa0113H06.1 35499 35678 (89315) C Copia00105 Copia (486) 8371 8179 18 577 20.4 10.7 4.1 C08HBa0113H06.1 43928 44096 (80897) + Copia00133 Copia 33 212 (4507) 19 991 17.3 2.3 9.4 C08HBa0113H06.1 44152 44450 (80543) + Unknown00043 Unknown 11047 11324 (0) 20 * 2438 9.6 0.0 3.3 C08HBa0113H06.1 44421 44785 (80208) C Unknown00058 Unknown (21) 1049 697 21 * 2758 14.4 3.2 4.4 C08HBa0113H06.1 44784 45283 (79710) C Unknown00030 Unknown (972) 494 1 22 436 15.2 8.3 6.7 C08HBa0113H06.1 45478 45597 (79396) + Unknown00043 Unknown 11203 11324 (0) 23 404 19.2 0.0 1.3 C08HBa0113H06.1 45589 45667 (79326) C Copia00125 Copia (190) 3875 3798 24 * 1387 14.3 0.4 2.5 C08HBa0113H06.1 45668 45904 (79089) + Copia00172 Copia 286 517 (6110) 25 1120 29.9 4.7 1.7 C08HBa0113H06.1 45904 46372 (78621) + Copia00133 Copia 263 745 (3974) 26 * 231 22.5 6.4 5.3 C08HBa0113H06.1 46386 46479 (78514) C Copia00143 Copia (5119) 185 91 27 1115 30.0 2.0 1.3 C08HBa0113H06.1 46485 46876 (78117) + Copia00133 Copia 751 1145 (3574) 26 264 21.4 15.7 0.0 C08HBa0113H06.1 47701 47789 (77204) C Unknown00034 Unknown (3872) 5205 5103 28 317 17.2 1.9 10.6 C08HBa0113H06.1 49457 49560 (75433) C Unknown00043 Unknown (4250) 7074 6980 29 243 17.8 0.0 0.0 C08HBa0113H06.1 49599 49643 (75350) C Copia00113 Copia (5132) 7274 7230 30 303 27.1 3.9 2.8 C08HBa0113H06.1 52443 52624 (72369) + ALIEN1_CA Unknown 2 185 (86) 31 1060 29.8 3.0 3.5 C08HBa0113H06.1 70200 70738 (54255) C Unknown00057 Unknown (2753) 873 338 32 552 18.8 7.6 4.1 C08HBa0113H06.1 70741 70912 (54081) + Unknown00043 Unknown 5280 5457 (5867) 33 231 22.4 16.1 4.5 C08HBa0113H06.1 85753 85864 (39129) C HAT1_MT Unknown (4464) 125 1 34 231 13.9 2.3 0.0 C08HBa0113H06.1 87654 87696 (37297) C Gypsy00119 Gypsy (211) 6506 6463 35 250 9.8 0.0 0.0 C08HBa0113H06.1 89029 89069 (35924) + Unknown00046 Unknown 34 74 (9970) 36 * 1071 13.9 1.2 0.0 C08HBa0113H06.1 89064 89235 (35758) + Unknown00034 Unknown 3852 4025 (5052) 37 * 2697 17.6 2.3 0.8 C08HBa0113H06.1 89228 89749 (35244) C GYPSOL2_LTR Unknown (259) 1321 792 38 304 24.5 7.8 8.6 C08HBa0113H06.1 89628 89859 (35134) + Gypsy00193 Gypsy 1550 1779 (11741) 39 * 286 26.2 5.3 6.6 C08HBa0113H06.1 91053 91203 (33790) C Unknown00045 Unknown (2480) 2044 1896 40 3200 20.7 2.8 4.3 C08HBa0113H06.1 91232 92562 (32431) + Unknown00056 Unknown 198 1233 (3876) 41 1560 26.5 4.9 5.7 C08HBa0113H06.1 92557 93080 (31913) + Unknown00056 Unknown 796 2382 (2727) 42 * 842 25.9 8.0 6.4 C08HBa0113H06.1 93081 93658 (31335) C Gypsy00033 Gypsy (5265) 5730 5144 43 1560 26.5 4.9 5.7 C08HBa0113H06.1 93659 93895 (31098) + Unknown00056 Unknown 2383 3099 (2010) 42 5820 24.9 4.2 6.1 C08HBa0113H06.1 97682 99698 (25295) C Copia00086 Copia (193) 6663 4686 44 278 30.8 2.1 1.4 C08HBa0113H06.1 99698 99842 (25151) + Copia00101 Copia 2888 3033 (4946) 45 485 22.3 0.8 6.9 C08HBa0113H06.1 99703 99832 (25161) C Copia00086 Copia (2503) 4353 4232 46 461 18.7 7.0 11.3 C08HBa0113H06.1 100635 100863 (24130) C Copia00086 Copia (6443) 413 195 47 44430 16.1 5.0 2.8 C08HBa0113H06.1 101171 109696 (15297) C Gypsy00073 Gypsy (407) 11677 2970 48 58271 0.0 0.0 0.0 C08HBa0113H06.1 101847 108240 (16753) + Gypsy00064 Gypsy 1 6394 (0) 49 8646 3.9 0.0 0.1 C08HBa0113H06.1 108842 109876 (15117) + Gypsy00064 Gypsy 2 1035 (5359) 50 483 23.2 4.0 5.8 C08HBa0113H06.1 110313 110486 (14507) C Copia00086 Copia (6) 6850 6680 51 2244 22.0 3.3 3.1 C08HBa0113H06.1 121713 122289 (2704) C Copia00019 Copia (3313) 1934 1357 52 1585 14.5 2.1 4.9 C08HBa0113H06.1 122952 123278 (1715) C Unknown00046 Unknown (9545) 499 182 53