##gff-version 3
##sequence-region C09SLm0004H04.1 1 129938
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match	12101	12905	0.971	+	0	ID=SGN-U329457_alignment_1;Target=SGN-U329457 1 805 +
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	12101	12905	0.971	+	0	ID=GTH_SGN_U_tom_match_part_1;Target=SGN-U329457 1 805 +;Parent=SGN-U329457_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match	35453	40599	1.000	-	0	ID=SGN-U328955_alignment_1;Target=SGN-U328955 1 645 +
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	40541	40599	1.000	-	0	ID=GTH_SGN_U_tom_match_part_2;Target=SGN-U328955 1 59 +;Parent=SGN-U328955_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	39215	39270	1.000	-	0	ID=GTH_SGN_U_tom_match_part_3;Target=SGN-U328955 60 115 +;Parent=SGN-U328955_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	38839	38997	1.000	-	0	ID=GTH_SGN_U_tom_match_part_4;Target=SGN-U328955 116 274 +;Parent=SGN-U328955_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	35453	35823	1.000	-	0	ID=GTH_SGN_U_tom_match_part_5;Target=SGN-U328955 275 645 +;Parent=SGN-U328955_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match	39823	40603	0.995	-	0	ID=SGN-U329610_alignment_1;Target=SGN-U329610 1 782 +
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	39823	40603	0.995	-	0	ID=GTH_SGN_U_tom_match_part_6;Target=SGN-U329610 1 782 +;Parent=SGN-U329610_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match	41101	42566	0.986	-	0	ID=SGN-U337381_alignment_1;Target=SGN-U337381 1 633 -
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	42298	42566	0.993	-	0	ID=GTH_SGN_U_tom_match_part_7;Target=SGN-U337381 1 269 -;Parent=SGN-U337381_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	41101	41467	0.981	-	0	ID=GTH_SGN_U_tom_match_part_8;Target=SGN-U337381 270 633 -;Parent=SGN-U337381_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match	43487	47172	0.997	-	0	ID=SGN-U321475_alignment_1;Target=SGN-U321475 1 1186 +
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	46524	47172	0.998	-	0	ID=GTH_SGN_U_tom_match_part_9;Target=SGN-U321475 1 649 +;Parent=SGN-U321475_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	43487	44023	0.994	-	0	ID=GTH_SGN_U_tom_match_part_10;Target=SGN-U321475 650 1186 +;Parent=SGN-U321475_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match	52077	57945	0.996	+	0	ID=SGN-U314709_alignment_1;Target=SGN-U314709 1 1943 +
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	52077	52420	1.000	+	0	ID=GTH_SGN_U_tom_match_part_11;Target=SGN-U314709 1 344 +;Parent=SGN-U314709_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	53570	53750	1.000	+	0	ID=GTH_SGN_U_tom_match_part_12;Target=SGN-U314709 345 525 +;Parent=SGN-U314709_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	54204	54651	1.000	+	0	ID=GTH_SGN_U_tom_match_part_13;Target=SGN-U314709 526 973 +;Parent=SGN-U314709_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	56325	56399	1.000	+	0	ID=GTH_SGN_U_tom_match_part_14;Target=SGN-U314709 974 1048 +;Parent=SGN-U314709_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	57051	57945	0.992	+	0	ID=GTH_SGN_U_tom_match_part_15;Target=SGN-U314709 1049 1943 +;Parent=SGN-U314709_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match	57993	64507	0.996	-	0	ID=SGN-U316105_alignment_1;Target=SGN-U316105 1 1802 +
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	64266	64507	1.000	-	0	ID=GTH_SGN_U_tom_match_part_16;Target=SGN-U316105 1 242 +;Parent=SGN-U316105_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	64041	64116	1.000	-	0	ID=GTH_SGN_U_tom_match_part_17;Target=SGN-U316105 243 318 +;Parent=SGN-U316105_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	63662	63754	1.000	-	0	ID=GTH_SGN_U_tom_match_part_18;Target=SGN-U316105 319 411 +;Parent=SGN-U316105_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	63505	63579	1.000	-	0	ID=GTH_SGN_U_tom_match_part_19;Target=SGN-U316105 412 486 +;Parent=SGN-U316105_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	61894	61998	1.000	-	0	ID=GTH_SGN_U_tom_match_part_20;Target=SGN-U316105 487 591 +;Parent=SGN-U316105_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	61716	61806	1.000	-	0	ID=GTH_SGN_U_tom_match_part_21;Target=SGN-U316105 592 682 +;Parent=SGN-U316105_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	61392	61597	1.000	-	0	ID=GTH_SGN_U_tom_match_part_22;Target=SGN-U316105 683 888 +;Parent=SGN-U316105_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	61012	61095	1.000	-	0	ID=GTH_SGN_U_tom_match_part_23;Target=SGN-U316105 889 972 +;Parent=SGN-U316105_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	60338	60400	1.000	-	0	ID=GTH_SGN_U_tom_match_part_24;Target=SGN-U316105 973 1035 +;Parent=SGN-U316105_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	60185	60247	1.000	-	0	ID=GTH_SGN_U_tom_match_part_25;Target=SGN-U316105 1036 1098 +;Parent=SGN-U316105_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	59598	59838	1.000	-	0	ID=GTH_SGN_U_tom_match_part_26;Target=SGN-U316105 1099 1339 +;Parent=SGN-U316105_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	58185	58631	0.982	-	0	ID=GTH_SGN_U_tom_match_part_27;Target=SGN-U316105 1340 1786 +;Parent=SGN-U316105_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	57993	58008	0.688	-	0	ID=GTH_SGN_U_tom_match_part_28;Target=SGN-U316105 1787 1802 +;Parent=SGN-U316105_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match	82831	83211	0.984	-	0	ID=SGN-U330841_alignment_1;Target=SGN-U330841 1 381 +
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	82831	83211	0.984	-	0	ID=GTH_SGN_U_tom_match_part_29;Target=SGN-U330841 1 381 +;Parent=SGN-U330841_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match	113177	113521	0.904	+	0	ID=SGN-U345883_alignment_1;Target=SGN-U345883 1 319 +
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	113177	113521	0.904	+	0	ID=GTH_SGN_U_tom_match_part_30;Target=SGN-U345883 1 319 +;Parent=SGN-U345883_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match	113460	114147	0.903	-	0	ID=SGN-U328762_alignment_1;Target=SGN-U328762 1 681 +
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	match_part	113460	114147	0.903	-	0	ID=GTH_SGN_U_tom_match_part_31;Target=SGN-U328762 1 681 +;Parent=SGN-U328762_alignment_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	gene	12101	12905	.	+	0	ID=GTH_SGN_U_tom_gene_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	mRNA	12101	12905	.	+	0	ID=GTH_SGN_U_tom_gene_1_AGS_1;Parent=GTH_SGN_U_tom_gene_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	12101	12905	0.971	+	0	ID=GTH_SGN_U_tom_exon_1;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	gene	35453	40603	.	-	0	ID=GTH_SGN_U_tom_gene_2
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	mRNA	39823	40603	.	-	0	ID=GTH_SGN_U_tom_gene_2_AGS_1;Parent=GTH_SGN_U_tom_gene_2
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	39823	40603	0.995	-	0	ID=GTH_SGN_U_tom_exon_2;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	mRNA	35453	40599	.	-	0	ID=GTH_SGN_U_tom_gene_2_AGS_2;Parent=GTH_SGN_U_tom_gene_2
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	40541	40599	1.000	-	0	ID=GTH_SGN_U_tom_exon_3;Parent=GTH_SGN_U_tom_gene_2_AGS_2
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	39215	39270	1.000	-	0	ID=GTH_SGN_U_tom_exon_4;Parent=GTH_SGN_U_tom_gene_2_AGS_2
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	38839	38997	1.000	-	0	ID=GTH_SGN_U_tom_exon_5;Parent=GTH_SGN_U_tom_gene_2_AGS_2
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	35453	35823	1.000	-	0	ID=GTH_SGN_U_tom_exon_6;Parent=GTH_SGN_U_tom_gene_2_AGS_2
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	gene	41101	42566	.	-	0	ID=GTH_SGN_U_tom_gene_3
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	mRNA	41101	42566	.	-	0	ID=GTH_SGN_U_tom_gene_3_AGS_1;Parent=GTH_SGN_U_tom_gene_3
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	42298	42566	0.993	-	0	ID=GTH_SGN_U_tom_exon_7;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	41101	41467	0.981	-	0	ID=GTH_SGN_U_tom_exon_8;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	gene	43487	47172	.	-	0	ID=GTH_SGN_U_tom_gene_4
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	mRNA	43487	47172	.	-	0	ID=GTH_SGN_U_tom_gene_4_AGS_1;Parent=GTH_SGN_U_tom_gene_4
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	46524	47172	0.998	-	0	ID=GTH_SGN_U_tom_exon_9;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	43487	44023	0.994	-	0	ID=GTH_SGN_U_tom_exon_10;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	gene	52077	57945	.	+	0	ID=GTH_SGN_U_tom_gene_5
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	mRNA	52077	57945	.	+	0	ID=GTH_SGN_U_tom_gene_5_AGS_1;Parent=GTH_SGN_U_tom_gene_5
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	52077	52420	1.000	+	0	ID=GTH_SGN_U_tom_exon_11;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	53570	53750	1.000	+	0	ID=GTH_SGN_U_tom_exon_12;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	54204	54651	1.000	+	0	ID=GTH_SGN_U_tom_exon_13;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	56325	56399	1.000	+	0	ID=GTH_SGN_U_tom_exon_14;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	57051	57945	0.992	+	0	ID=GTH_SGN_U_tom_exon_15;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	gene	57993	64507	.	-	0	ID=GTH_SGN_U_tom_gene_6
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	mRNA	57993	64507	.	-	0	ID=GTH_SGN_U_tom_gene_6_AGS_1;Parent=GTH_SGN_U_tom_gene_6
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	64266	64507	1.000	-	0	ID=GTH_SGN_U_tom_exon_16;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	64041	64116	1.000	-	0	ID=GTH_SGN_U_tom_exon_17;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	63662	63754	1.000	-	0	ID=GTH_SGN_U_tom_exon_18;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	63505	63579	1.000	-	0	ID=GTH_SGN_U_tom_exon_19;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	61894	61998	1.000	-	0	ID=GTH_SGN_U_tom_exon_20;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	61716	61806	1.000	-	0	ID=GTH_SGN_U_tom_exon_21;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	61392	61597	1.000	-	0	ID=GTH_SGN_U_tom_exon_22;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	61012	61095	1.000	-	0	ID=GTH_SGN_U_tom_exon_23;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	60338	60400	1.000	-	0	ID=GTH_SGN_U_tom_exon_24;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	60185	60247	1.000	-	0	ID=GTH_SGN_U_tom_exon_25;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	59598	59838	1.000	-	0	ID=GTH_SGN_U_tom_exon_26;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	58185	58631	0.982	-	0	ID=GTH_SGN_U_tom_exon_27;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	57993	58008	0.688	-	0	ID=GTH_SGN_U_tom_exon_28;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	gene	82831	83211	.	-	0	ID=GTH_SGN_U_tom_gene_7
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	mRNA	82831	83211	.	-	0	ID=GTH_SGN_U_tom_gene_7_AGS_1;Parent=GTH_SGN_U_tom_gene_7
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	82831	83211	0.984	-	0	ID=GTH_SGN_U_tom_exon_29;Parent=GTH_SGN_U_tom_gene_7_AGS_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	gene	113177	113521	.	+	0	ID=GTH_SGN_U_tom_gene_8
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	mRNA	113177	113521	.	+	0	ID=GTH_SGN_U_tom_gene_8_AGS_1;Parent=GTH_SGN_U_tom_gene_8
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	113177	113521	0.904	+	0	ID=GTH_SGN_U_tom_exon_30;Parent=GTH_SGN_U_tom_gene_8_AGS_1
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	gene	113460	114147	.	-	0	ID=GTH_SGN_U_tom_gene_9
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	mRNA	113460	114147	.	-	0	ID=GTH_SGN_U_tom_gene_9_AGS_1;Parent=GTH_SGN_U_tom_gene_9
C09SLm0004H04.1	GenomeThreader_SGN_U_tomato	exon	113460	114147	0.903	-	0	ID=GTH_SGN_U_tom_exon_31;Parent=GTH_SGN_U_tom_gene_9_AGS_1