<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-15 05:55:01"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E376858" ref_strand="+" ref_description="SGN-E376858 [TUS-19-P19](-)">
      <seq>atttggtgctggcatcgtcttttagtttcccttgtggtataagctctgtggttccatacttttaccccatatatcttctcattctactcatatggagggagagaagggacgaagctagatgtgcagagaagtacaaagatgtgtgggctgaataccgtaaacttgttccttacaggatcttaccttacgtttactagctcaatcgtttgtccacgttgcttgtgcattagagtcagaattagcctcactgtaccgccctacccaagcatgagaagggacgaactcatgaatgaatattacatcaaattcgagcttttgccctatctatgcagctttctcatctcctctacgaaagtaatcttttaatctatttcagttaggatcaaccctgtatccaggttgtaactgattgcttagcttttgaaagtttttccagaaccaacttgtacactagatgtactttatcatggcaggatttaaatgtgctgcttgtattgaatgccaactatggaattatttttcatggtttgtaatcttggagcagcttactaatgtgtgctgaaattttcgaatgattttcccgactttttagttttttgtatgccccttgactaatttcaggagatatttgctacgttccccccaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="1" stop="6301"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="295" g_stop="337" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="43" r_length="43" r_score="0.953"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="338" i_stop="424" i_length="87">
            <donor d_prob="0.985" d_score="0.95"/>
            <acceptor a_prob="0.001" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="425" g_stop="1026" g_length="602"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="645" r_length="602" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="646" polyA_stop="673"/>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E376858" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>645</cumulative_length_of_scored_exons>
        <coverage percentage="0.958" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E376858" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="295" e_stop="337"/>
          <exon e_start="425" e_stop="1026"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTGTTGCTGGCATCGTCTTTTAGTTTACCTTGTGGTATAAGGTAATAATTTTGAACTCTTGCTACTTCAGTTTCAATGACAATTTGCATAGTAGTGAAAAAAATTACATTACTCGTGTATGCCTGCAGCTCTGTGGTTCCATACTTTTACCCCATATATCTTCTCATTCTACTCATATGGAGGGAGAGAAGGGACGAAGCTAGATGTGCAGAGAAGTACAAAGATGTGTGGGCTGAATACCGTAAACTTGTTCCTTACAGGATCTTACCTTACGTTTACTAGCTCAATCGTTTGTCCACGTTGCTTGTGCATTAGAGTCAGAATTAGCCTCACTGTACCGCACTACCCAAGCATGAGAAGGGACGAACTCATGAATGAATATTACATCAAATTCGAGCTTTTGCCCTATCTATGCAGCTTTCTCATCTCCTCTACGAAAGTAATCTTTTAATCTATTTCAGTTAGGATCAACACTGTATCCAGGTTGTAACTGATTGCTTAGCTTTTGAAAGTTTTTCCAGAACCAACTTGTACACTAGATGTACTTTATCATGGCAGGATTTAAATGTGCTGCTTGTATTGAATGCCAACTATGGAATTATTTTTCATGGTTTGTAATCTTGGAGCAGCTTACTAATGTGTGCTGAAATTTTCGAATGATTTTCCCGACTTTCTAGTTTTTTGTATGCACCTTGACTAATTTCAGGAGATATTTGCTACGTTCCACCAG</genome_strand>
        <mrna_strand>ATTTGGTGCTGGCATCGTCTTTTAGTTTCCCTTGTGGTATAAG.......................................................................................CTCTGTGGTTCCATACTTTTACCCCATATATCTTCTCATTCTACTCATATGGAGGGAGAGAAGGGACGAAGCTAGATGTGCAGAGAAGTACAAAGATGTGTGGGCTGAATACCGTAAACTTGTTCCTTACAGGATCTTACCTTACGTTTACTAGCTCAATCGTTTGTCCACGTTGCTTGTGCATTAGAGTCAGAATTAGCCTCACTGTACCGCCCTACCCAAGCATGAGAAGGGACGAACTCATGAATGAATATTACATCAAATTCGAGCTTTTGCCCTATCTATGCAGCTTTCTCATCTCCTCTACGAAAGTAATCTTTTAATCTATTTCAGTTAGGATCAACCCTGTATCCAGGTTGTAACTGATTGCTTAGCTTTTGAAAGTTTTTCCAGAACCAACTTGTACACTAGATGTACTTTATCATGGCAGGATTTAAATGTGCTGCTTGTATTGAATGCCAACTATGGAATTATTTTTCATGGTTTGTAATCTTGGAGCAGCTTACTAATGTGTGCTGAAATTTTCGAATGATTTTCCCGACTTTTTAGTTTTTTGTATGCCCCTTGACTAATTTCAGGAGATATTTGCTACGTTCCCCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E227040" ref_strand="+" ref_description="SGN-E227040 [cLED-1-L6](-)">
      <seq>tacgtttactagctcaatcgtttgtccacgttgcttgtgcattagagtcagaattagcctcactgtaccgcactacccaagcatgagaagggacgaactcatgaatgaatattacatcaaattcgagcttttgccctatctatgcagctttctcatctcctctacgaaagtaatcttttaatctatttcagttaggatcaacactgtatccaggttgtaactgattgcttagcttttgaaagtttttccagaaccaacttgtacactagatgtactttatcatggcaggatttaaatgtgctgcttgtattgaatgccaactatggaattatttttcatggtttgtaatcttggagcagcttactaatgtgtgctgaaattttcgaatgattttcccgactttctagttttttgtatgccccttgactaatttcaggagatatttgctacgttccaccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="267" stop="6301"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="567" g_stop="1026" g_length="460"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="460" r_length="460" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="461" polyA_stop="488"/>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E227040" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>460</cumulative_length_of_scored_exons>
        <coverage percentage="0.943" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E227040" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="567" e_stop="1026"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACGTTTACTAGCTCAATCGTTTGTCCACGTTGCTTGTGCATTAGAGTCAGAATTAGCCTCACTGTACCGCACTACCCAAGCATGAGAAGGGACGAACTCATGAATGAATATTACATCAAATTCGAGCTTTTGCCCTATCTATGCAGCTTTCTCATCTCCTCTACGAAAGTAATCTTTTAATCTATTTCAGTTAGGATCAACACTGTATCCAGGTTGTAACTGATTGCTTAGCTTTTGAAAGTTTTTCCAGAACCAACTTGTACACTAGATGTACTTTATCATGGCAGGATTTAAATGTGCTGCTTGTATTGAATGCCAACTATGGAATTATTTTTCATGGTTTGTAATCTTGGAGCAGCTTACTAATGTGTGCTGAAATTTTCGAATGATTTTCCCGACTTTCTAGTTTTTTGTATGCACCTTGACTAATTTCAGGAGATATTTGCTACGTTCCACCAG</genome_strand>
        <mrna_strand>TACGTTTACTAGCTCAATCGTTTGTCCACGTTGCTTGTGCATTAGAGTCAGAATTAGCCTCACTGTACCGCACTACCCAAGCATGAGAAGGGACGAACTCATGAATGAATATTACATCAAATTCGAGCTTTTGCCCTATCTATGCAGCTTTCTCATCTCCTCTACGAAAGTAATCTTTTAATCTATTTCAGTTAGGATCAACACTGTATCCAGGTTGTAACTGATTGCTTAGCTTTTGAAAGTTTTTCCAGAACCAACTTGTACACTAGATGTACTTTATCATGGCAGGATTTAAATGTGCTGCTTGTATTGAATGCCAACTATGGAATTATTTTTCATGGTTTGTAATCTTGGAGCAGCTTACTAATGTGTGCTGAAATTTTCGAATGATTTTCCCGACTTTCTAGTTTTTTGTATGCCCCTTGACTAATTTCAGGAGATATTTGCTACGTTCCACCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E477349" ref_strand="+" ref_description="SGN-E477349 [cSTB-47-P12]">
      <seq>aatactcagtttcattttttcctttaatttgccgtccactgcctctgtaagatctccggcagaattccatttgttcaggatgatttcatagaacagttctatttgtttttttctatgagaggctactttgagtttatccctgcaaacatctgcttatcatttctgtcaaattaagagaaataaaggcagaaagattggacttttaccggtcactgccgcggcggtatggcaggaagggaaggaagcttgattccacaagcagatgattttcagattggaacttcgtggttttcaatgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="15787" stop="17133"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16087" g_stop="16165" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16166" i_stop="16614" i_length="449">
            <donor d_prob="0.982" d_score="0.96"/>
            <acceptor a_prob="0.751" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16615" g_stop="16833" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="299" r_length="221" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E477349" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>298</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E477349" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16087" e_stop="16165"/>
          <exon e_start="16615" e_stop="16833"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATACTCAGTTTCATTTTTTTCCTTTAATTTGCCGTCCACTGCCTCTGTAAGATCTCCGGCAGAATTTCATTTATTCAGGTCAGTGTACGAATTCACTAAACACCCAATTAATTACAGGTGAATTTTCTCTAATTTGTAGATTAAAAAAAAACTGAAGAAAAGAAGCAGCATTTTCTTTGTAAAAGATTAAAGATCTTATACAGATTTTGTTTGTTCAGCCAGATTGCTACAATCTGTCACTGATCAAACCTAATTTTGTTACTGATATGTTAGAATGAATTAAAATGAAATTTGTGATTAAATTACATTTCACTTTCACCCTCCACTCACTGACTCCATCATGGCAGGACCAGTAGATAAGCTAGTCTATGAGGGATCTGTACTGGAAAAAATATTTTTGGTATAATTTTACAAATTTGAGTAAATGGGGTTCTTAAAAGTGATGTTTTTCAAGATTCTTCAGATGTTCTGTTTCTCTTCCTGCAATTTATTTTTTTTAATTTCCTTATATGGTTTTTGTTTTGTAGGATGATTTCATAGAACAGTTTTATTTGTTTTTTTCTATGAGAGACTTCTTTGAGTTTATCCCTGCAAACATCTGCTTATCATTTCTGTCAAATTAAGAG--ATAAAGGCAGAAAGATTGGATTCTTACCGGTCACTGCCGCGGCAGTATGGCCGGAAGGGAAGGAAGCTTGATTCCACAGGCAGATGATTTTCAGATTGGAACTTCATGGTTTCCAATGAC</genome_strand>
        <mrna_strand>AATACTCAGTTTCA-TTTTTTCCTTTAATTTGCCGTCCACTGCCTCTGTAAGATCTCCGGCAGAATTCCATTTGTTCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGATTTCATAGAACAGTTCTATTTGTTTTTTTCTATGAGAGGCTACTTTGAGTTTATCCCTGCAAACATCTGCTTATCATTTCTGTCAAATTAAGAGAAATAAAGGCAGAAAGATTGGACTTTTACCGGTCACTGCCGCGGCGGTATGGCAGGAAGGGAAGGAAGCTTGATTCCACAAGCAGATGATTTTCAGATTGGAACTTCGTGGTTTTCAATGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E325216" ref_strand="+" ref_description="SGN-E325216 [cTOC-1-I15]">
      <seq>aaaagagaaaagacagcaaacacaatggattcactagactgggacgcagtgaggtgtgcagatgtcaatgagatatcccataccattagagaacgggggatgaacaatatgctagcagagagaatcaaggatttccttaatcggatttttagagaacatggaagtattgatcttgaatggctgagagacgttccaccagacaaagcaaaagagtatctactaagcatcaggggcttgggcctgaagagcgtagagtgtgtgcgacttttaacacttcacaaccttgcttttccggtcgacacaaatgttgggcgtatagctgttagactgggatgggtgcccctgcagccactgccagagtcactacaattgcatcttctggaattgtaccctgtgctggagtcaattcaaaaatacctctggccacgtctctgcaagcttgatcaaagaacattatatgagttgcattaccatatgatcacttttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="21685" stop="23434"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21985" g_stop="22113" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="129" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22114" i_stop="22237" i_length="124">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.871" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22238" g_stop="22317" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="209" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22318" i_stop="22403" i_length="86">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="22404" g_stop="22488" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="210" r_stop="294" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="22489" i_stop="22568" i_length="80">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.839" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="22569" g_stop="22660" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="386" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="22661" i_stop="22735" i_length="75">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="22736" g_stop="22804" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="455" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="22805" i_stop="23101" i_length="297">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.889" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="23102" g_stop="23134" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="488" r_length="33" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E325216" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>488</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E325216" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21985" e_stop="22113"/>
          <exon e_start="22238" e_stop="22317"/>
          <exon e_start="22404" e_stop="22488"/>
          <exon e_start="22569" e_stop="22660"/>
          <exon e_start="22736" e_stop="22804"/>
          <exon e_start="23102" e_stop="23134"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGAGAAAAGACAGCAAACACAATGGATTCACTAGACTGGGACGCAGTGAGGTGTGCAGATGTCAATGAGATATCCCATACCATTAGAGAACGGGGGATGAACAATATGCTAGCAGAGAGAATCAAGGTACATCAGTGAAAATTGCAATTAACAGCCTAATTGTTTTAAAATCTGGATACCTCCATTATTCATCTACCAAAGTAATTCCCTAACCTTAAGAGACTGTTCAATGGAAACTGAACAATTGCAGGATTTCCTTAATCGGATTTTTAGAGAACATGGAAGTATTGATCTTGAATGGCTGAGAGACGTTCCACCAGACAAAGCAAAGTAAGCTTTCAATTGACCAAATAATTTCTTCCATGTTTTATCTATTCCTCTGCACTGACTAAACAAATTCACATGCATGGTATCAGAGAGTATCTACTAAGCATCAGGGGCTTGGGCCTGAAGAGCGTAGAGTGTGTGCGACTTTTAACACTTCACAACCTTGCTTTTCCGGTAAGATTTCTGAACCAATTATTGAAGACATAATTAATATGAAATGACCCGTGTTTCTCACTAATCATGTCTTTTATAAGGTCGACACAAATGTTGGGCGTATAGCTGTTAGACTGGGATGGGTGCCCCTGCAGCCACTGCCAGAGTCACTACAATTGCATCTTCTGGAATTGTGAGTATCTTGTGTAGTGTGTATATAAAGAATTTCCAAAATTGCCTACACAGTCTAACTCTGCTATTTCTTCAGGTACCCTGTGCTGGAGTCAATTCAAAAATACCTCTGGCCACGTCTCTGCAAGCTTGATCAAAGAACATTGTAAGTAACATCCTATTCTCTATCATTTTGCCCAGCCTGGTTGACAAGCATCAATTTACTATTAAATGTAAGTGGTTCCATTTCATCTTATTGAAACATCCAATTGTAACAGTATACTGCATAGTGGATGAAAAGATTTTGATTTTAAGGAAGTGCAGAGGGACTTGTAGATTAGGGTAGTTGATTTCTTCAAAGGGAGAAAAAATAATATACGTGCATAGTACTTGTAACTAAAAAAGATATTTTTTCTTCTAATAAAGCAATGCATTTACTGATTCAAATCCTACTTGATTACAGATATGAGTTGCATTACCATATGATCACTTTTGG</genome_strand>
        <mrna_strand>AAAAGAGAAAAGACAGCAAACACAATGGATTCACTAGACTGGGACGCAGTGAGGTGTGCAGATGTCAATGAGATATCCCATACCATTAGAGAACGGGGGATGAACAATATGCTAGCAGAGAGAATCAAG............................................................................................................................GATTTCCTTAATCGGATTTTTAGAGAACATGGAAGTATTGATCTTGAATGGCTGAGAGACGTTCCACCAGACAAAGCAAA......................................................................................AGAGTATCTACTAAGCATCAGGGGCTTGGGCCTGAAGAGCGTAGAGTGTGTGCGACTTTTAACACTTCACAACCTTGCTTTTCCG................................................................................GTCGACACAAATGTTGGGCGTATAGCTGTTAGACTGGGATGGGTGCCCCTGCAGCCACTGCCAGAGTCACTACAATTGCATCTTCTGGAATT...........................................................................GTACCCTGTGCTGGAGTCAATTCAAAAATACCTCTGGCCACGTCTCTGCAAGCTTGATCAAAGAACATT.........................................................................................................................................................................................................................................................................................................ATATGAGTTGCATTACCATATGATCACTTTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E293319" ref_strand="+" ref_description="SGN-E293319 [cLET-18-N19]">
      <seq>agcaaacacaatggattcactagactgggacgcagtgaggtgtgcagatgtcaatgagatatcccataccattagagaacgggggatgaacaatatgctagcagagagaatcaaggatttccttaatcggatttttagagaacatggaagtattgatcttgaatggctgagagacgttccaccagacaaagcaaaagagtatctactaagcatcaggggcttgggcctgaagagcgtagagtgtgtgcgacttttaacacttcacaaccttgcttttccggtcgacacagatgttgggcgtatagctgttagactgggatgggtgcccctgcagccactgccagagtcactacaattgcatcttgtggaattgtaccctgtgctggagtcaattcaaaaatacctctggccacgtctctgcaagcttgatcaaagaacattatatgagttgcattaccatatgatcacttttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="21699" stop="23434"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21999" g_stop="22113" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22114" i_stop="22237" i_length="124">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.871" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22238" g_stop="22317" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="195" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22318" i_stop="22403" i_length="86">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="22404" g_stop="22488" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="196" r_stop="280" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="22489" i_stop="22568" i_length="80">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.839" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="22569" g_stop="22660" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="372" r_length="92" r_score="0.978"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="22661" i_stop="22735" i_length="75">
            <donor d_prob="0.979" d_score="0.98"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="22736" g_stop="22804" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="373" r_stop="441" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="22805" i_stop="23101" i_length="297">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.889" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="23102" g_stop="23134" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="442" r_stop="474" r_length="33" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E293319" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>474</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E293319" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21999" e_stop="22113"/>
          <exon e_start="22238" e_stop="22317"/>
          <exon e_start="22404" e_stop="22488"/>
          <exon e_start="22569" e_stop="22660"/>
          <exon e_start="22736" e_stop="22804"/>
          <exon e_start="23102" e_stop="23134"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCAAACACAATGGATTCACTAGACTGGGACGCAGTGAGGTGTGCAGATGTCAATGAGATATCCCATACCATTAGAGAACGGGGGATGAACAATATGCTAGCAGAGAGAATCAAGGTACATCAGTGAAAATTGCAATTAACAGCCTAATTGTTTTAAAATCTGGATACCTCCATTATTCATCTACCAAAGTAATTCCCTAACCTTAAGAGACTGTTCAATGGAAACTGAACAATTGCAGGATTTCCTTAATCGGATTTTTAGAGAACATGGAAGTATTGATCTTGAATGGCTGAGAGACGTTCCACCAGACAAAGCAAAGTAAGCTTTCAATTGACCAAATAATTTCTTCCATGTTTTATCTATTCCTCTGCACTGACTAAACAAATTCACATGCATGGTATCAGAGAGTATCTACTAAGCATCAGGGGCTTGGGCCTGAAGAGCGTAGAGTGTGTGCGACTTTTAACACTTCACAACCTTGCTTTTCCGGTAAGATTTCTGAACCAATTATTGAAGACATAATTAATATGAAATGACCCGTGTTTCTCACTAATCATGTCTTTTATAAGGTCGACACAAATGTTGGGCGTATAGCTGTTAGACTGGGATGGGTGCCCCTGCAGCCACTGCCAGAGTCACTACAATTGCATCTTCTGGAATTGTGAGTATCTTGTGTAGTGTGTATATAAAGAATTTCCAAAATTGCCTACACAGTCTAACTCTGCTATTTCTTCAGGTACCCTGTGCTGGAGTCAATTCAAAAATACCTCTGGCCACGTCTCTGCAAGCTTGATCAAAGAACATTGTAAGTAACATCCTATTCTCTATCATTTTGCCCAGCCTGGTTGACAAGCATCAATTTACTATTAAATGTAAGTGGTTCCATTTCATCTTATTGAAACATCCAATTGTAACAGTATACTGCATAGTGGATGAAAAGATTTTGATTTTAAGGAAGTGCAGAGGGACTTGTAGATTAGGGTAGTTGATTTCTTCAAAGGGAGAAAAAATAATATACGTGCATAGTACTTGTAACTAAAAAAGATATTTTTTCTTCTAATAAAGCAATGCATTTACTGATTCAAATCCTACTTGATTACAGATATGAGTTGCATTACCATATGATCACTTTTGG</genome_strand>
        <mrna_strand>AGCAAACACAATGGATTCACTAGACTGGGACGCAGTGAGGTGTGCAGATGTCAATGAGATATCCCATACCATTAGAGAACGGGGGATGAACAATATGCTAGCAGAGAGAATCAAG............................................................................................................................GATTTCCTTAATCGGATTTTTAGAGAACATGGAAGTATTGATCTTGAATGGCTGAGAGACGTTCCACCAGACAAAGCAAA......................................................................................AGAGTATCTACTAAGCATCAGGGGCTTGGGCCTGAAGAGCGTAGAGTGTGTGCGACTTTTAACACTTCACAACCTTGCTTTTCCG................................................................................GTCGACACAGATGTTGGGCGTATAGCTGTTAGACTGGGATGGGTGCCCCTGCAGCCACTGCCAGAGTCACTACAATTGCATCTTGTGGAATT...........................................................................GTACCCTGTGCTGGAGTCAATTCAAAAATACCTCTGGCCACGTCTCTGCAAGCTTGATCAAAGAACATT.........................................................................................................................................................................................................................................................................................................ATATGAGTTGCATTACCATATGATCACTTTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E423085" ref_strand="+" ref_description="SGN-E423085 [STM-41-B13]">
      <seq>ctgggacgcagtgaggtgtgcagatgtcaatgagatagcccataccattagagaacggggaatgaacaatatgctagcagagagaatcaaggatttccttaatcggatttttagagaacatggaagtattgatcttgaatggctgagagacgttccaccagacaaagcaaaagagtatctattaagcatctggggcttgggcctgaagagcgtagagtgtgtgcgacttttaacacttcacaaccttgcttttcctgtcgacacaaatgttgggcgtatagctgttagactgggatgggtgcccctgcagccactgccagagtcgctacaattgcatcttctggaactgtaccctgtgctggagtcaattcaaaaatacctctggccacgtctctgcaagcttgatcaaagaacattatatgagttacattaccatatgatcacttttggaaaggtcttctgttcaaaaagcaaacccaactgcaacgcctgtccaatgagaggagaatgcagacacttcgcaagtgcttttgcaagtgcaaggcttgccctgccagcaccagaagagaagagtatagtgagtgccacagagaacnatgcagctggccagaatccattccagattttcatcaacagccgctgcccttaccccaggctaatcaaacaccattagagcatcccaaattgatcaactccgcacctattattgaggtgccagcaacaccacagcccattgtcgaagagcctgcctcacctgagccagagncagaagctcctgaaattgacattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="21723" stop="24302"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22023" g_stop="22113" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22114" i_stop="22237" i_length="124">
            <donor d_prob="0.973" d_score="0.98"/>
            <acceptor a_prob="0.871" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22238" g_stop="22317" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="171" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22318" i_stop="22403" i_length="86">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="22404" g_stop="22488" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="256" r_length="85" r_score="0.965"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="22489" i_stop="22568" i_length="80">
            <donor d_prob="0.945" d_score="0.98"/>
            <acceptor a_prob="0.839" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="22569" g_stop="22660" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="348" r_length="92" r_score="0.978"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="22661" i_stop="22735" i_length="75">
            <donor d_prob="0.979" d_score="0.96"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="22736" g_stop="22804" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="349" r_stop="417" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="22805" i_stop="23101" i_length="297">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.889" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="23102" g_stop="23138" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="418" r_stop="454" r_length="37" r_score="0.973"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="23139" i_stop="23221" i_length="83">
            <donor d_prob="0.974" d_score="0.00"/>
            <acceptor a_prob="0.470" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="23222" g_stop="23304" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="537" r_length="83" r_score="0.988"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="23305" i_stop="23747" i_length="443">
            <donor d_prob="0.983" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="23748" g_stop="24002" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="538" r_stop="791" r_length="254" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E423085" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>792</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E423085" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22023" e_stop="22113"/>
          <exon e_start="22238" e_stop="22317"/>
          <exon e_start="22404" e_stop="22488"/>
          <exon e_start="22569" e_stop="22660"/>
          <exon e_start="22736" e_stop="22804"/>
          <exon e_start="23102" e_stop="23138"/>
          <exon e_start="23222" e_stop="23304"/>
          <exon e_start="23748" e_stop="24002"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGGGACGCAGTGAGGTGTGCAGATGTCAATGAGATATCCCATACCATTAGAGAACGGGGGATGAACAATATGCTAGCAGAGAGAATCAAGGTACATCAGTGAAAATTGCAATTAACAGCCTAATTGTTTTAAAATCTGGATACCTCCATTATTCATCTACCAAAGTAATTCCCTAACCTTAAGAGACTGTTCAATGGAAACTGAACAATTGCAGGATTTCCTTAATCGGATTTTTAGAGAACATGGAAGTATTGATCTTGAATGGCTGAGAGACGTTCCACCAGACAAAGCAAAGTAAGCTTTCAATTGACCAAATAATTTCTTCCATGTTTTATCTATTCCTCTGCACTGACTAAACAAATTCACATGCATGGTATCAGAGAGTATCTACTAAGCATCAGGGGCTTGGGCCTGAAGAGCGTAGAGTGTGTGCGACTTTTAACACTTCACAACCTTGCTTTTCCGGTAAGATTTCTGAACCAATTATTGAAGACATAATTAATATGAAATGACCCGTGTTTCTCACTAATCATGTCTTTTATAAGGTCGACACAAATGTTGGGCGTATAGCTGTTAGACTGGGATGGGTGCCCCTGCAGCCACTGCCAGAGTCACTACAATTGCATCTTCTGGAATTGTGAGTATCTTGTGTAGTGTGTATATAAAGAATTTCCAAAATTGCCTACACAGTCTAACTCTGCTATTTCTTCAGGTACCCTGTGCTGGAGTCAATTCAAAAATACCTCTGGCCACGTCTCTGCAAGCTTGATCAAAGAACATTGTAAGTAACATCCTATTCTCTATCATTTTGCCCAGCCTGGTTGACAAGCATCAATTTACTATTAAATGTAAGTGGTTCCATTTCATCTTATTGAAACATCCAATTGTAACAGTATACTGCATAGTGGATGAAAAGATTTTGATTTTAAGGAAGTGCAGAGGGACTTGTAGATTAGGGTAGTTGATTTCTTCAAAGGGAGAAAAAATAATATACGTGCATAGTACTTGTAACTAAAAAAGATATTTTTTCTTCTAATAAAGCAATGCATTTACTGATTCAAATCCTACTTGATTACAGATATGAGTTGCATTACCATATGATCACTTTTGGAAAGGTATGTCTATACCACTAGTTACTCTCCCCTAGAACTAGCATCTGCAATCACAGTTTAAATCAATTTCATGGCTACTTCATTAGGTCTTCTGTTCAAAAAGCAAACCCAACTGCAACGCATGTCCAATGAGAGGAGAATGCAGACACTTCGCAAGTGCTTTTGCAAGGTTTGCCTATTATTCTATATACTTTCATGCAAGAAATTAGTTCTCTTGTTTGTCTATCTTTATTGCTTCTTCTCAAGCTTCTCGACATCTAATCCAAAGAACCATATCCAGAATGTGGCTGCTGAAACTAGATTTGACAAATCTATTTACTCTTACTCAGACAACATAAAATTTGCACTTAAGCTAACCTGGTAGTGTTTTCACTCATCCATGAAGCGTATGACATACTGTCAGTCACTCAGTGATGAAGCAACTCTAGCAGAAACTTTGAAATTCACGGATCTCTTCTTGTATAAGATAGAACTCCTACATTTTCAAACTTAAGCTAATACCCTTCTTGTTAGCACATTCAAGTAATGCATTCTAACTAGATTAGTAATTTCATAGTCTAAAATTGAAGCACTGTTTTTTCATATATGATACTTGACACATTTCTCTTTCAGCGCAAGGCTTGCCCTGCCAGCACCAGAAGAGAAAAGTATAGTGAGTGCAACAGAGAACAATGCAGCTGACCAGAATCCATTCCAGAACTTCAATCAACAGCCGCTAACCTTACCCCAGGCTAATCAAACACCTTTAGAGCATCCCAAATTGATCAACTCCGCACCTATTATTGAGGTGCCAGCAACACCACAGCCCATTGTCGAAGAGCCTGCCTCACCTGAGCCAGAGCAAGATGCTCCCGAAATCGACATTGA</genome_strand>
        <mrna_strand>CTGGGACGCAGTGAGGTGTGCAGATGTCAATGAGATAGCCCATACCATTAGAGAACGGGGAATGAACAATATGCTAGCAGAGAGAATCAAG............................................................................................................................GATTTCCTTAATCGGATTTTTAGAGAACATGGAAGTATTGATCTTGAATGGCTGAGAGACGTTCCACCAGACAAAGCAAA......................................................................................AGAGTATCTATTAAGCATCTGGGGCTTGGGCCTGAAGAGCGTAGAGTGTGTGCGACTTTTAACACTTCACAACCTTGCTTTTCCT................................................................................GTCGACACAAATGTTGGGCGTATAGCTGTTAGACTGGGATGGGTGCCCCTGCAGCCACTGCCAGAGTCGCTACAATTGCATCTTCTGGAACT...........................................................................GTACCCTGTGCTGGAGTCAATTCAAAAATACCTCTGGCCACGTCTCTGCAAGCTTGATCAAAGAACATT.........................................................................................................................................................................................................................................................................................................ATATGAGTTACATTACCATATGATCACTTTTGGAAAG...................................................................................GTCTTCTGTTCAAAAAGCAAACCCAACTGCAACGCCTGTCCAATGAGAGGAGAATGCAGACACTTCGCAAGTGCTTTTGCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGGCTTGCCCTGCCAGCACCAGAAGAGAAGAGTATAGTGAGTGCCACAGAGAACNATGCAGCTGGCCAGAATCCATTCCAGATTTTC-ATCAACAGCCGCTGCCCTTACCCCAGGCTAATCAAACACCATTAGAGCATCCCAAATTGATCAACTCCGCACCTATTATTGAGGTGCCAGCAACACCACAGCCCATTGTCGAAGAGCCTGCCTCACCTGAGCCAGAGNCAGAAGCTCCTGAAATTGACATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E449705" ref_strand="+" ref_description="SGN-E449705 [cSTS-7-C20]">
      <seq>ctgggacgcagtgaggtgtgcagatgtcaatgagatagcccataccattagagaacggggaatgaacaatatgctagcagagagaatcaaggatttccttaatcggatttttagagaacatggaagtattgatcttgaatggctgagagacgttccaccagacaaagcaaaagagtatctattaagcatctggggcttgggcctgaagagcgtagagtgtgtgcgacttttaacacttcacaaccttgcttttcctgtcgacacaaatgttgggcgtatagctgttagactgggatgggtgcccctgcagccactgccagagtcgctacaattgcatcttctggaactgtaccctgtgctggagtcaattcaaaaatacctctggccacgtctctgcaagcttgatcaaagaacattatatgagttacattaccatatgatcacttttggaaaggtcttctgttcaaaaagcaaacccaactgcaacgcctgtccaatgagaggagaatgcagacacttcgcaagtgcttttgcaagtgcaaggcttgccctgccagcaccagaagagaagagtatagtgagtgccacagagaacaatgcagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="21723" stop="24113"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22023" g_stop="22113" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22114" i_stop="22237" i_length="124">
            <donor d_prob="0.973" d_score="0.98"/>
            <acceptor a_prob="0.871" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22238" g_stop="22317" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="171" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22318" i_stop="22403" i_length="86">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="22404" g_stop="22488" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="256" r_length="85" r_score="0.965"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="22489" i_stop="22568" i_length="80">
            <donor d_prob="0.945" d_score="0.98"/>
            <acceptor a_prob="0.839" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="22569" g_stop="22660" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="348" r_length="92" r_score="0.978"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="22661" i_stop="22735" i_length="75">
            <donor d_prob="0.979" d_score="0.96"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="22736" g_stop="22804" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="349" r_stop="417" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="22805" i_stop="23101" i_length="297">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.889" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="23102" g_stop="23138" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="418" r_stop="454" r_length="37" r_score="0.973"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="23139" i_stop="23221" i_length="83">
            <donor d_prob="0.974" d_score="0.00"/>
            <acceptor a_prob="0.470" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="23222" g_stop="23304" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="537" r_length="83" r_score="0.988"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="23305" i_stop="23747" i_length="443">
            <donor d_prob="0.983" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="23748" g_stop="23813" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="538" r_stop="603" r_length="66" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E449705" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>603</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E449705" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22023" e_stop="22113"/>
          <exon e_start="22238" e_stop="22317"/>
          <exon e_start="22404" e_stop="22488"/>
          <exon e_start="22569" e_stop="22660"/>
          <exon e_start="22736" e_stop="22804"/>
          <exon e_start="23102" e_stop="23138"/>
          <exon e_start="23222" e_stop="23304"/>
          <exon e_start="23748" e_stop="23813"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGGGACGCAGTGAGGTGTGCAGATGTCAATGAGATATCCCATACCATTAGAGAACGGGGGATGAACAATATGCTAGCAGAGAGAATCAAGGTACATCAGTGAAAATTGCAATTAACAGCCTAATTGTTTTAAAATCTGGATACCTCCATTATTCATCTACCAAAGTAATTCCCTAACCTTAAGAGACTGTTCAATGGAAACTGAACAATTGCAGGATTTCCTTAATCGGATTTTTAGAGAACATGGAAGTATTGATCTTGAATGGCTGAGAGACGTTCCACCAGACAAAGCAAAGTAAGCTTTCAATTGACCAAATAATTTCTTCCATGTTTTATCTATTCCTCTGCACTGACTAAACAAATTCACATGCATGGTATCAGAGAGTATCTACTAAGCATCAGGGGCTTGGGCCTGAAGAGCGTAGAGTGTGTGCGACTTTTAACACTTCACAACCTTGCTTTTCCGGTAAGATTTCTGAACCAATTATTGAAGACATAATTAATATGAAATGACCCGTGTTTCTCACTAATCATGTCTTTTATAAGGTCGACACAAATGTTGGGCGTATAGCTGTTAGACTGGGATGGGTGCCCCTGCAGCCACTGCCAGAGTCACTACAATTGCATCTTCTGGAATTGTGAGTATCTTGTGTAGTGTGTATATAAAGAATTTCCAAAATTGCCTACACAGTCTAACTCTGCTATTTCTTCAGGTACCCTGTGCTGGAGTCAATTCAAAAATACCTCTGGCCACGTCTCTGCAAGCTTGATCAAAGAACATTGTAAGTAACATCCTATTCTCTATCATTTTGCCCAGCCTGGTTGACAAGCATCAATTTACTATTAAATGTAAGTGGTTCCATTTCATCTTATTGAAACATCCAATTGTAACAGTATACTGCATAGTGGATGAAAAGATTTTGATTTTAAGGAAGTGCAGAGGGACTTGTAGATTAGGGTAGTTGATTTCTTCAAAGGGAGAAAAAATAATATACGTGCATAGTACTTGTAACTAAAAAAGATATTTTTTCTTCTAATAAAGCAATGCATTTACTGATTCAAATCCTACTTGATTACAGATATGAGTTGCATTACCATATGATCACTTTTGGAAAGGTATGTCTATACCACTAGTTACTCTCCCCTAGAACTAGCATCTGCAATCACAGTTTAAATCAATTTCATGGCTACTTCATTAGGTCTTCTGTTCAAAAAGCAAACCCAACTGCAACGCATGTCCAATGAGAGGAGAATGCAGACACTTCGCAAGTGCTTTTGCAAGGTTTGCCTATTATTCTATATACTTTCATGCAAGAAATTAGTTCTCTTGTTTGTCTATCTTTATTGCTTCTTCTCAAGCTTCTCGACATCTAATCCAAAGAACCATATCCAGAATGTGGCTGCTGAAACTAGATTTGACAAATCTATTTACTCTTACTCAGACAACATAAAATTTGCACTTAAGCTAACCTGGTAGTGTTTTCACTCATCCATGAAGCGTATGACATACTGTCAGTCACTCAGTGATGAAGCAACTCTAGCAGAAACTTTGAAATTCACGGATCTCTTCTTGTATAAGATAGAACTCCTACATTTTCAAACTTAAGCTAATACCCTTCTTGTTAGCACATTCAAGTAATGCATTCTAACTAGATTAGTAATTTCATAGTCTAAAATTGAAGCACTGTTTTTTCATATATGATACTTGACACATTTCTCTTTCAGCGCAAGGCTTGCCCTGCCAGCACCAGAAGAGAAAAGTATAGTGAGTGCAACAGAGAACAATGCAGC</genome_strand>
        <mrna_strand>CTGGGACGCAGTGAGGTGTGCAGATGTCAATGAGATAGCCCATACCATTAGAGAACGGGGAATGAACAATATGCTAGCAGAGAGAATCAAG............................................................................................................................GATTTCCTTAATCGGATTTTTAGAGAACATGGAAGTATTGATCTTGAATGGCTGAGAGACGTTCCACCAGACAAAGCAAA......................................................................................AGAGTATCTATTAAGCATCTGGGGCTTGGGCCTGAAGAGCGTAGAGTGTGTGCGACTTTTAACACTTCACAACCTTGCTTTTCCT................................................................................GTCGACACAAATGTTGGGCGTATAGCTGTTAGACTGGGATGGGTGCCCCTGCAGCCACTGCCAGAGTCGCTACAATTGCATCTTCTGGAACT...........................................................................GTACCCTGTGCTGGAGTCAATTCAAAAATACCTCTGGCCACGTCTCTGCAAGCTTGATCAAAGAACATT.........................................................................................................................................................................................................................................................................................................ATATGAGTTACATTACCATATGATCACTTTTGGAAAG...................................................................................GTCTTCTGTTCAAAAAGCAAACCCAACTGCAACGCCTGTCCAATGAGAGGAGAATGCAGACACTTCGCAAGTGCTTTTGCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGGCTTGCCCTGCCAGCACCAGAAGAGAAGAGTATAGTGAGTGCCACAGAGAACAATGCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E553964" ref_strand="+" ref_description="SGN-E553964 [cTSC-2-M21]">
      <seq>tggatcccccgggctgcaggttagactgggatgggtgcccctgcagccactgccagagtcactacaattgcatcttctggaattgtaccctgtgctggagtcaattcaaaaatacctctggccacgtctctgcaagcttgatcaaagaacattatatgagttgcattaccatatgatcacttttggaaaggtcttctgttcaaaaagcaaacccaactgcaacgcatgtccaatgagaggagaatgcagacacttcgcaagtgcttttgcaagcgcaaggcttgccctgccagcaccagaagagaaaagtatagtgagtgcaacagagaacaatgcagctgaccagaatccattccagaacttcaatcaacagccgctaaccttaccccaggctaatcaaacacctttagagcatcccaaattgatcaactccgcacctattattgaggtgccagcaacaccacagcccattgtcgaagagcctgcctcacctgagccagagcaagatgctcccgaaatcgacattgaagatgtttgctttgaagatcctgatgaaattcctacaattgaattgaatatggcgcagttcactcaaaatgtgaagaactttgtgcaaaacaatatggagcttcaacaggtcgaaatgtcaaaagccttagtagctttaactccagcagctgcttcaattcctacacctaaacttaagcatataagccggctcagaactgaacatcaagtatatgaacttccagattctcatcctcttcttgaagggttcgagaaaagagaaccagatgatccatcctcctatcttctggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="22296" stop="24840"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22594" g_stop="22660" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="84" r_length="67" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22661" i_stop="22735" i_length="75">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22736" g_stop="22804" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="153" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22805" i_stop="23101" i_length="297">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.889" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23102" g_stop="23138" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="190" r_length="37" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="23139" i_stop="23221" i_length="83">
            <donor d_prob="0.974" d_score="0.00"/>
            <acceptor a_prob="0.470" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="23222" g_stop="23304" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="273" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="23305" i_stop="23747" i_length="443">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="23748" g_stop="24212" g_length="465"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="738" r_length="465" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="24213" i_stop="24339" i_length="127">
            <donor d_prob="0.791" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="24340" g_stop="24376" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="739" r_stop="775" r_length="37" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="24377" i_stop="24496" i_length="120">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="24497" g_stop="24540" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="776" r_stop="819" r_length="44" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E553964" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>802</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E553964" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22594" e_stop="22660"/>
          <exon e_start="22736" e_stop="22804"/>
          <exon e_start="23102" e_stop="23138"/>
          <exon e_start="23222" e_stop="23304"/>
          <exon e_start="23748" e_stop="24212"/>
          <exon e_start="24340" e_stop="24376"/>
          <exon e_start="24497" e_stop="24540"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTTAGACTGGGATGGGTGCCCCTGCAGCCACTGCCAGAGTCACTACAATTGCATCTTCTGGAATTGTGAGTATCTTGTGTAGTGTGTATATAAAGAATTTCCAAAATTGCCTACACAGTCTAACTCTGCTATTTCTTCAGGTACCCTGTGCTGGAGTCAATTCAAAAATACCTCTGGCCACGTCTCTGCAAGCTTGATCAAAGAACATTGTAAGTAACATCCTATTCTCTATCATTTTGCCCAGCCTGGTTGACAAGCATCAATTTACTATTAAATGTAAGTGGTTCCATTTCATCTTATTGAAACATCCAATTGTAACAGTATACTGCATAGTGGATGAAAAGATTTTGATTTTAAGGAAGTGCAGAGGGACTTGTAGATTAGGGTAGTTGATTTCTTCAAAGGGAGAAAAAATAATATACGTGCATAGTACTTGTAACTAAAAAAGATATTTTTTCTTCTAATAAAGCAATGCATTTACTGATTCAAATCCTACTTGATTACAGATATGAGTTGCATTACCATATGATCACTTTTGGAAAGGTATGTCTATACCACTAGTTACTCTCCCCTAGAACTAGCATCTGCAATCACAGTTTAAATCAATTTCATGGCTACTTCATTAGGTCTTCTGTTCAAAAAGCAAACCCAACTGCAACGCATGTCCAATGAGAGGAGAATGCAGACACTTCGCAAGTGCTTTTGCAAGGTTTGCCTATTATTCTATATACTTTCATGCAAGAAATTAGTTCTCTTGTTTGTCTATCTTTATTGCTTCTTCTCAAGCTTCTCGACATCTAATCCAAAGAACCATATCCAGAATGTGGCTGCTGAAACTAGATTTGACAAATCTATTTACTCTTACTCAGACAACATAAAATTTGCACTTAAGCTAACCTGGTAGTGTTTTCACTCATCCATGAAGCGTATGACATACTGTCAGTCACTCAGTGATGAAGCAACTCTAGCAGAAACTTTGAAATTCACGGATCTCTTCTTGTATAAGATAGAACTCCTACATTTTCAAACTTAAGCTAATACCCTTCTTGTTAGCACATTCAAGTAATGCATTCTAACTAGATTAGTAATTTCATAGTCTAAAATTGAAGCACTGTTTTTTCATATATGATACTTGACACATTTCTCTTTCAGCGCAAGGCTTGCCCTGCCAGCACCAGAAGAGAAAAGTATAGTGAGTGCAACAGAGAACAATGCAGCTGACCAGAATCCATTCCAGAACTTCAATCAACAGCCGCTAACCTTACCCCAGGCTAATCAAACACCTTTAGAGCATCCCAAATTGATCAACTCCGCACCTATTATTGAGGTGCCAGCAACACCACAGCCCATTGTCGAAGAGCCTGCCTCACCTGAGCCAGAGCAAGATGCTCCCGAAATCGACATTGAAGATGTTTGCTTTGAAGATCCTGATGAAATTCCTACAATTGAATTGAATATGGCGCAGTTCACTCAAAATGTGAAGAACTTTGTGCAAAACAATATGGAGCTTCAACAGGTCGAAATGTCAAAAGCCTTAGTAGCTTTAACTCCAGCAGCTGCTTCAATTCCTACACCTAAACTTAAGCATATAAGCCGGCTCAGAACTGAACATCAAGTGTAAGTGGATGCTCCAAATAACTTCTGATAGATCGCCAATGCAGTAGGGTAGCCAATTTTTTCCTAGGCTATAAAATTCTCGTAAATTTGTTTTTTTGCTTACTATCAATTGTTTCTCCACCCACAGATATGAACTTCCAGATTCTCATCCTCTTCTTGAAGGGGTCAGTTTTTCTTTTCTATTTTTGATTGGTTAAATACTAAGTTGTAAATCCATATATAAGCAGCATGTAAGCTTATATTTAAATTGATCCTCCTGATAATTACATCTTTTCATGTTGCAGTTCGAGAAAAGAGAACCAGATGATCCATCCTCCTATCTTCTGGC</genome_strand>
        <mrna_strand>AGGTTAGACTGGGATGGGTGCCCCTGCAGCCACTGCCAGAGTCACTACAATTGCATCTTCTGGAATT...........................................................................GTACCCTGTGCTGGAGTCAATTCAAAAATACCTCTGGCCACGTCTCTGCAAGCTTGATCAAAGAACATT.........................................................................................................................................................................................................................................................................................................ATATGAGTTGCATTACCATATGATCACTTTTGGAAAG...................................................................................GTCTTCTGTTCAAAAAGCAAACCCAACTGCAACGCATGTCCAATGAGAGGAGAATGCAGACACTTCGCAAGTGCTTTTGCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAGGCTTGCCCTGCCAGCACCAGAAGAGAAAAGTATAGTGAGTGCAACAGAGAACAATGCAGCTGACCAGAATCCATTCCAGAACTTCAATCAACAGCCGCTAACCTTACCCCAGGCTAATCAAACACCTTTAGAGCATCCCAAATTGATCAACTCCGCACCTATTATTGAGGTGCCAGCAACACCACAGCCCATTGTCGAAGAGCCTGCCTCACCTGAGCCAGAGCAAGATGCTCCCGAAATCGACATTGAAGATGTTTGCTTTGAAGATCCTGATGAAATTCCTACAATTGAATTGAATATGGCGCAGTTCACTCAAAATGTGAAGAACTTTGTGCAAAACAATATGGAGCTTCAACAGGTCGAAATGTCAAAAGCCTTAGTAGCTTTAACTCCAGCAGCTGCTTCAATTCCTACACCTAAACTTAAGCATATAAGCCGGCTCAGAACTGAACATCAAGT...............................................................................................................................ATATGAACTTCCAGATTCTCATCCTCTTCTTGAAGGG........................................................................................................................TTCGAGAAAAGAGAACCAGATGATCCATCCTCCTATCTTCTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E561136" ref_strand="+" ref_description="SGN-E561136 [17081]">
      <seq>caaatttgttgaaacacatataactctgtatctcttctccatccccaaacactgaacagtctcattatccaaatctaccatggatatacttcgaaatctctatatagagctacggatattcagcttcttatgattgttctgaagttctccagagcgttgttgatatagattgatgtttcaacttgaatatgcagcatcggttatgactatttgagatctctttcattgatgcttttgaggtgtagtcagattgaagttgtaacacagtgatattaacatcgatggcaatttctagaggaatctgcagtcggcagcgggattttgcagtgatatacatgtttctttgcgaggcgaattaaagtgttgagagatgttctccatgttcttccgatgacagttaataaggttttctcagcttcaaacaaaggtgtgggaattgaagcagctgctggagttaaagctactaaggcttttgacatttcgacctgttgaagctccatattgttttgcacaaagttcttcacattttgagtgaactgcgccatattcaattcaattgtaggaatttcatcaggatcttcaaagcaaacatcttcaatgtcaatttcaggagcttcttgctctggctcaggtgaggcaggctcttcgacaatgggctgtggtgttgctggcacctcaataataggtgcggagttgatcaatttgggatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="29563" stop="23586"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29263" g_stop="29022" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="239" r_length="239" r_score="0.921"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29021" i_stop="27521" i_length="1501">
            <donor d_prob="0.977" d_score="0.96"/>
            <acceptor a_prob="0.690" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27520" g_stop="27400" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="240" r_stop="359" r_length="120" r_score="0.909"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27399" i_stop="27006" i_length="394">
            <donor d_prob="0.000" d_score="0.86"/>
            <acceptor a_prob="0.855" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27005" g_stop="26940" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="360" r_stop="427" r_length="68" r_score="0.924"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26939" i_stop="24170" i_length="2770">
            <donor d_prob="0.956" d_score="0.98"/>
            <acceptor a_prob="0.916" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24169" g_stop="23886" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="428" r_stop="711" r_length="284" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E561136" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E561136" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29263" e_stop="29022"/>
          <exon e_start="27520" e_stop="27400"/>
          <exon e_start="27005" e_stop="26940"/>
          <exon e_start="24169" e_stop="23886"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAATTTTGTTGAAACAAATATATTAGCTCTGTATCTCTTCTCCGTCTCCAAACACTGAACAGTTTCATAATCCAATTCTACCATGGATATACTTCGAAATCTCTATATTGAGCTAC-GATATTCAGCTTCTCATGATTGTTCTGAAGTTCTCCAGGAGCGTTGTTGATTTGGATTGATGTTTCAACTTGAATATGCAGCATCGG-TATGACTATTTGAGATCTCTTTCATTGATGCTTTTGAGGTGATTTACGTGCTTATTGTAGTTTATTTGAATTCATAATATTGATTATGAGATCTCTCTCCCTGTGCTATTGATTATGAGTACATGAGATCTCTCTGCGATTGAGATAGCAATTACTTGAAAACATGAAAATAGATGTTTTGAGGTGATTGATATGACAATTATAGTTGAAATGAAGTTTGAATTCACAGCATTGATTATGAGCACATGAGATCTCTGTGCTTGAGATAGTAATTACTTAGAAACATGAAAATAGATGTTTTGAGGTGATTGATGTGCTAATTATAGACTTGTAGTTGAAATGAAGTTTGAATTCACAGCATTGATTATGAGCACACGAGATCTCTGTCACTGAGGTGTTTGTTACGTGGTTATTTGAAAATACGACAATAGATGCCGCTGTGGTTACTGATCTGCAAAGTTTAGTCGAAATGAAGTATATTTGAATTTATAGAATGATTATGAGTACATGAGACGTCTCTGTCCTTGAGATGTTTGTTGAGTAATTATTTGAAATATGAAAATAGATGCAGTTGAGGTTACTGATCTGTAAAGTTTAGTCCAAATGAAGTATATTTGAATTTATAGAATGATTATGAGTACATGAGATGTCTCTGTCCTTGAGATGTTTGTTAAGTAATTATTTGAAAATATGAAATAGATGCAGTTGAGGTTACTGATCTGTAAAGTTTAGTCGAAATGAAGTATATTTGAATTTATAGCATGATTATGAGTACATGAGATGTTTCTGTCCTTGAGATGTTTGTTAAGTAATTATTTGAAAACTTGAGAATAGATGCTTTTGAGGTGATTGATGTGCTAGTCAAAATGAAGTTTGTTTGAATTTACAGCATTGATTACGAGTACATGAGATCTATCTGTCATTGAGATATTTGTTAGTTAATTATTTGAAAACACATAATTGATGCTTTTGAGGTGATTGATGTGCTAATGATAGTCGAAGTGTAAGTTCATTTGAATTTACAACATTGATTACGAGTACATTAAATCTCTATATGATTGAGATATTTGTTAGGTAATTACTTGGAAAGATGAAAAATGGATGCAGCTGAGGGGATTGATGTGCAAATTGTAGTTGAAATGAAGTTTAGTTGAATTTATAGCATGACAATGAGTACATGAGATTTCTCTGTAATTGAGATATTCGTTAGGTAATTACTTGGAAACATGAAAATAGATGCAGTCGAGGTGATTGGTGTGCAAATTGTATTCGCAGTGAAGTTCTTTCGAACATGTTGTATTGATTATGTGTACATGGGATTTCTCTGTCATTGAGGTATGTGTTAAGTGATTGTTTCAAAACATGAAAATAGATGTTTTTGAGGTGATTGACGTGTGAATTGTAGTCGAAATGAAGTTATTTGAATTTATAGCATTGATTATGAGTACATGAGATTGCTCTGTGTTTGGGATACCTGTTAAGTAATTACTTGAAAACATGAAAATAGATGCCTTCTGAGGTGATTAACGTGCATGGTAGGTGTAGTCAGATTGAAGTTGTAACACAGTGATATAAACATCGATGGCAGTTTCTAGAGGAATCTGCGGTCAACAGCGGGATTTTGCAGTGAGATGCATGTTACTTTGCGAGGTGAATATATGCCTTTATGATGGCTTTATTACTAGTTTGTAAACTTCAAATTAAAGTGTAAAGTGGTCATATGTTGATCGTGGTTTAAGATGAATATGAGTTATTCCGTTAGTTGGTTTCCTTATATATCTTGGTGTTAATGTGCTTTAACTCAAAAAGAACGAGTTATATGAGTTTGTTTGCTTCTAAAATCTCTTCTTCATATGTTCTGTATGTCAAAAGCTACAGGAAGTTGATGACAGATCCATTGAGACGTCAAACTCAAGGGCTTTTGGCTCAAATATGAAAGCAGATATATAGTTTAAAACCCACCCTCTCACTTAAAGTTCTTCATTCTAAAATTTCAATATGCTAATGCTACTACACATGTTTATGCTCATCTTATTGCTAATGCCTATGTATAGAG-GTTGAGAGATG-TCTCCATGCTCTTCCGATGACAGTTAATAAGGTTTTCTCAGCTTCAAACAAAGGTATGATGTAAGAAAAAAACAGCTGTTAGGACTTCCAAGTGTCTTTATGCATCTACTTTCAGTTGTGATTTTCAAAACTGTATGTCTAGCTAGTAGTTGCAAACAGCAGATGTAATTGTTAGATGTATTTCCGTGATGTCTTGGCTGACTTATGAAGTATTTATGAAGTATGAATAGCGTATTATTTCAAGCTAATCTCTACAAGGGTGCTAGTATCATGAATAGAATGAGTATATTCGTATAGTCCTTGCTAGTCCTGTTTTTTATATTACAAATACTCCTTGCTAGTCCTGTTTTTTATATTTACCCTCGAGTCTTCCTTATGTTTAGTTGAGACAGTTCACATTATAACATTGTTAACTTGTTCAAACTATTGCTACTTGTTGGTGCAGCTCCCGTCTTTAACAAAAATGGGTTTATAGATATTTTTGCATGCTCGTATATAAGCCTGCTTTGCTTACGAGAAACCATTCCTTTTACATATTACCACAAGATTTAGTTTTAATATTCGCCTCATGTTTTATGCGGGGGGTGCTAAACTAGTTTTTGTAAGTTATGAGCCAAGTGTATGATTGCCATAGAAGAGCACCAATTTTATTACTCTTTCTATCCTTTGAAGGGAAAATGAAAACCAACTAAATTTGAGATCTCACTGGGCTAAAAGAGCACTAGCCTGTTGAAGAATTCAATGATTGTTGGTAATAGAAATGACCACCCTAAGTATCAGCTACAAGTAATCGATTATCATCTCATTTACTCTCTTGCTACAACTTACTTACATGTTAGAGAATGCCTATCTTTTTTCTTTCCTAAGGTTTATAACATCATGGTACTGCATGTTGTTAGCTTGTTCAGCCCGGATGGCTGCCTTGCTGATTCAGTTGGACACTGTACCCTAGTTTTCATCTGGCTTTCCTTTTGTCCTAGTCAACTTGCTGGCTGGAAAGTGCAACCTTGCCATGAGTGGTCGTGGTGCTCGTAACTTCTTGTCAAAACCCCTCACACAAACAAATCCTGTGAAATACAGTTCTTTGTCAGAAAACAAATAAAAGGTTTTGCAGTTAACACTTTTCCCCCCTAGCTACATGAACAATTATTACTTCCTTATAATTTTGTTTTTATGATTTGATCCAAAGAGTAAGGCAAAAGGGAAAGTCGCTGACATGCTTGGTGCTCATGCCGGCTTAATTTGAGTCTTTTTGAATTTGCATAATGATGTAACATGCATGCTGATTTACTTGGTAGAAATGGATAAGAAGCTTAGACAAGCATTTGGACCTCTGAACCTGAGGTTTTCAAACTACATACCTCTCCAAAAGCAATGTTGGATACTTTCTGTGGTTAGGCCTGATTAACAGAGAACACACATACTGTTATTTTACTCCGAAATCTTTTTAAAAAATAAATAGGTTTCATTCTTTAGTTTGTTTACCTTTGAATATTGATGGTATAGAGGTTCCGAAGTAAACTGTTCGTCGCGGCAGATTCCATAGCCAATTTCTTGGGACATCAATTGGCTTGAGGCTGGATTCATGGTCTGCAAACACCTGAGGAATAGCAAAATTGTTACTATTAAAGCCTTATCAAATGCAAAAAATGCTCGCTCGAGTTGAGGAAACGTTGGTTGTATTCACCTCGTTAACCTGGAAGTATGTACCATTGAGCGGAAAGCTACCTCTCATAGCTGTTCTACATGGTATCTGTTAGAAAGTATATTCAGAGATGATCAGGATTATCGTATCACTTTCCCATGACATACACTAAAACAGTTTGTTCTCTTCTCTTACCAGAATTGTCCCTCTCACAGTTTGTGCATGTGCTTCACGTATGCTGTTGCATGCAAAACATGTTTCATCATCACATAGTCTACCAGTTTCTTGGGAGTTGCATTGTCTTCCCGGTGGCTGAATAGAATCCGAAGTTTCACCTGATACGGGTTTGGTACATAAGGGAGTATTAATCTATAGAGAGACTGATGAAAAGCTTGACCTATTTAGCGCAATTACCCTCTACTACTGCAGTGCAACTACTACTGAGATTGGAACCTGGGACTTGCTCAGTCCAGCTTAGCTATGCAGAAGTGTTCCTTACAATCATGAGTTCTCTAATTAATCAGCTTACAGATAGGAACCGGTTACTTTGCATTGTTTTCAAAAGGGCTCCTCTCTTATGTGCTATATTACATTAATTGAAATTACCCTCTACTACTGCAGTGCAACTACTACAGAGATTGGAACCTGGGACTTGCCCAGTCCAGCTTAGCTATGCAGAAGTGTTCCTTACAATCATGAGTTCTCTAATTAAGCAGCTTACAGATAGGAACCGGTTACTTTGCATTGTTTTCGAAAGGGCTTATGTGCTATATTACATTAATTGAAATCTTACCAGGTGTCCATATTGCCAGAAGATAGGAGGATGGATCATCTGGTTCTCTTTTCTCGAACTGCAACATGAAAAGATGTAATTATCAGGAGGATCAATTTAAATATAAGCTTACATGCTGCTTATATATGGATTTACAACTTAGTATTTAACCAATCAAAAATAGAAAAGAAAAACTGACCCCTTCAAGAAGAGGATGAGAATCTGGAAGTTCATATCTGTGGGTGGAGAAACAATTGATAGTAAGCAAAAAAACAAATTTACGAGAATTTTATAGCCTAGGAAAAAATTGGCTACCCTACTGCATTGGCGATCTATCAGAAGTTATTTGGAGCATCCACTTACACTTGATGTTCAGTTCTGAGCCGGCTTATATGCTTAAGTTTAGGTGTAGGAATTGAAGCAGCTGCTGGAGTTAAAGCTACTAAGGCTTTTGACATTTCGACCTGTTGAAGCTCCATATTGTTTTGCACAAAGTTCTTCACATTTTGAGTGAACTGCGCCATATTCAATTCAATTGTAGGAATTTCATCAGGATCTTCAAAGCAAACATCTTCAATGTCGATTTCGGGAGCATCTTGCTCTGGCTCAGGTGAGGCAGGCTCTTCGACAATGGGCTGTGGTGTTGCTGGCACCTCAATAATAGGTGCGGAGTTGATCAATTTGGGATGC</genome_strand>
        <mrna_strand>CAAAT-TTGTTGAAACACATATA--A-CTCTGTATCTCTTCTCCATCCCCAAACACTGAACAGTCTCATTATCCAAATCTACCATGGATATACTTCGAAATCTCTATATAGAGCTACGGATATTCAGCTTCTTATGATTGTTCTGAAGTTCTCCA-GAGCGTTGTTGATATAGATTGATGTTTCAACTTGAATATGCAGCATCGGTTATGACTATTTGAGATCTCTTTCATTGATGCTTTTGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTAGTCAGATTGAAGTTGTAACACAGTGATATTAACATCGATGGCAATTTCTAGAGGAATCTGCAGTCGGCAGCGGGATTTTGCAGTGATATACATGTTTCTTTGCGAGGCGAAT-TAA..........................................................................................................................................................................................................................................................................................................................................................................................................AGTGTTGAGAGATGTTCTCCATGTTCTTCCGATGACAGTTAATAAGGTTTTCTCAGCTTCAAACAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGGGAATTGAAGCAGCTGCTGGAGTTAAAGCTACTAAGGCTTTTGACATTTCGACCTGTTGAAGCTCCATATTGTTTTGCACAAAGTTCTTCACATTTTGAGTGAACTGCGCCATATTCAATTCAATTGTAGGAATTTCATCAGGATCTTCAAAGCAAACATCTTCAATGTCAATTTCAGGAGCTTCTTGCTCTGGCTCAGGTGAGGCAGGCTCTTCGACAATGGGCTGTGGTGTTGCTGGCACCTCAATAATAGGTGCGGAGTTGATCAATTTGGGATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E425832" ref_strand="+" ref_description="SGN-E425832 [STM-45-L15]">
      <seq>catggatatacttcgaaatctctatatagagctacggatattcagcttcttatgattgttctgaagttctccagagcgttgttgatatagattgatgtttcaacttgaatatgcagcatcggttatgactattggagatctctttcattgatgcttttgaggttgagagatgttctccatgttcttccgatgacagttaataaggttttctcagcttcaaacaaagaattgtccctctcacagtttgagcatgtgcttcacgtatgctgttgcatgcaaaacatgtttcatcatcacatagtctaccagtttcttgggagttgcactgtcttcccggtggctgaatagaatccgatgtttcacctgatatgggtttggtacataagggagtattaatctatagactgcctgaggaaaagctaacctatttagccaaattaccctctaccactgcagcacatactactactgagattggaacctgggacttgctcagtccagcttagctatgcagaagtgttccttacaatcatgagttctctaattaatcagcttacagataggaaccggttactttgcatagttttaaaagggctcctcttatgtgttatattacattaattgaaatcttaccaggtgtccatattgctagaagatangaggatggatcatctggttctcttttctcgaactggcacatgannagatgtaattatcaggaggatcnatttaatataagcttacatgctgcttatagatggatataaaactgatgcagtatttaaccaatcaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="29481" stop="24095"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29181" g_stop="29022" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="159" r_length="159" r_score="0.925"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29021" i_stop="27006" i_length="2016">
            <donor d_prob="0.977" d_score="0.90"/>
            <acceptor a_prob="0.855" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27005" g_stop="26940" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="160" r_stop="226" r_length="67" r_score="0.955"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26939" i_stop="25150" i_length="1790">
            <donor d_prob="0.956" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25149" g_stop="24776" g_length="374"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="599" r_length="373" r_score="0.949"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24775" i_stop="24589" i_length="187">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24588" g_stop="24394" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="600" r_stop="797" r_length="198" r_score="0.892"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E425832" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>795</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E425832" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29181" e_stop="29022"/>
          <exon e_start="27005" e_stop="26940"/>
          <exon e_start="25149" e_stop="24776"/>
          <exon e_start="24588" e_stop="24394"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGGATATACTTCGAAATCTCTATATTGAGCTAC-GATATTCAGCTTCTCATGATTGTTCTGAAGTTCTCCAGGAGCGTTGTTGATTTGGATTGATGTTTCAACTTGAATATGCAGCATCGG-TATGACTATTTGAGATCTCTTTCATTGATGCTTTTGAGGTGATTTACGTGCTTATTGTAGTTTATTTGAATTCATAATATTGATTATGAGATCTCTCTCCCTGTGCTATTGATTATGAGTACATGAGATCTCTCTGCGATTGAGATAGCAATTACTTGAAAACATGAAAATAGATGTTTTGAGGTGATTGATATGACAATTATAGTTGAAATGAAGTTTGAATTCACAGCATTGATTATGAGCACATGAGATCTCTGTGCTTGAGATAGTAATTACTTAGAAACATGAAAATAGATGTTTTGAGGTGATTGATGTGCTAATTATAGACTTGTAGTTGAAATGAAGTTTGAATTCACAGCATTGATTATGAGCACACGAGATCTCTGTCACTGAGGTGTTTGTTACGTGGTTATTTGAAAATACGACAATAGATGCCGCTGTGGTTACTGATCTGCAAAGTTTAGTCGAAATGAAGTATATTTGAATTTATAGAATGATTATGAGTACATGAGACGTCTCTGTCCTTGAGATGTTTGTTGAGTAATTATTTGAAATATGAAAATAGATGCAGTTGAGGTTACTGATCTGTAAAGTTTAGTCCAAATGAAGTATATTTGAATTTATAGAATGATTATGAGTACATGAGATGTCTCTGTCCTTGAGATGTTTGTTAAGTAATTATTTGAAAATATGAAATAGATGCAGTTGAGGTTACTGATCTGTAAAGTTTAGTCGAAATGAAGTATATTTGAATTTATAGCATGATTATGAGTACATGAGATGTTTCTGTCCTTGAGATGTTTGTTAAGTAATTATTTGAAAACTTGAGAATAGATGCTTTTGAGGTGATTGATGTGCTAGTCAAAATGAAGTTTGTTTGAATTTACAGCATTGATTACGAGTACATGAGATCTATCTGTCATTGAGATATTTGTTAGTTAATTATTTGAAAACACATAATTGATGCTTTTGAGGTGATTGATGTGCTAATGATAGTCGAAGTGTAAGTTCATTTGAATTTACAACATTGATTACGAGTACATTAAATCTCTATATGATTGAGATATTTGTTAGGTAATTACTTGGAAAGATGAAAAATGGATGCAGCTGAGGGGATTGATGTGCAAATTGTAGTTGAAATGAAGTTTAGTTGAATTTATAGCATGACAATGAGTACATGAGATTTCTCTGTAATTGAGATATTCGTTAGGTAATTACTTGGAAACATGAAAATAGATGCAGTCGAGGTGATTGGTGTGCAAATTGTATTCGCAGTGAAGTTCTTTCGAACATGTTGTATTGATTATGTGTACATGGGATTTCTCTGTCATTGAGGTATGTGTTAAGTGATTGTTTCAAAACATGAAAATAGATGTTTTTGAGGTGATTGACGTGTGAATTGTAGTCGAAATGAAGTTATTTGAATTTATAGCATTGATTATGAGTACATGAGATTGCTCTGTGTTTGGGATACCTGTTAAGTAATTACTTGAAAACATGAAAATAGATGCCTTCTGAGGTGATTAACGTGCATGGTAGGTGTAGTCAGATTGAAGTTGTAACACAGTGATATAAACATCGATGGCAGTTTCTAGAGGAATCTGCGGTCAACAGCGGGATTTTGCAGTGAGATGCATGTTACTTTGCGAGGTGAATATATGCCTTTATGATGGCTTTATTACTAGTTTGTAAACTTCAAATTAAAGTGTAAAGTGGTCATATGTTGATCGTGGTTTAAGATGAATATGAGTTATTCCGTTAGTTGGTTTCCTTATATATCTTGGTGTTAATGTGCTTTAACTCAAAAAGAACGAGTTATATGAGTTTGTTTGCTTCTAAAATCTCTTCTTCATATGTTCTGTATGTCAAAAGCTACAGGAAGTTGATGACAGATCCATTGAGACGTCAAACTCAAGGGCTTTTGGCTCAAATATGAAAGCAGATATATAGTTTAAAACCCACCCTCTCACTTAAAGTTCTTCATTCTAAAATTTCAATATGCTAATGCTACTACACATGTTTATGCTCATCTTATTGCTAATGCCTATGTATAGAGGTTGAGAGATG-TCTCCATGCTCTTCCGATGACAGTTAATAAGGTTTTCTCAGCTTCAAACAAAGGTATGATGTAAGAAAAAAACAGCTGTTAGGACTTCCAAGTGTCTTTATGCATCTACTTTCAGTTGTGATTTTCAAAACTGTATGTCTAGCTAGTAGTTGCAAACAGCAGATGTAATTGTTAGATGTATTTCCGTGATGTCTTGGCTGACTTATGAAGTATTTATGAAGTATGAATAGCGTATTATTTCAAGCTAATCTCTACAAGGGTGCTAGTATCATGAATAGAATGAGTATATTCGTATAGTCCTTGCTAGTCCTGTTTTTTATATTACAAATACTCCTTGCTAGTCCTGTTTTTTATATTTACCCTCGAGTCTTCCTTATGTTTAGTTGAGACAGTTCACATTATAACATTGTTAACTTGTTCAAACTATTGCTACTTGTTGGTGCAGCTCCCGTCTTTAACAAAAATGGGTTTATAGATATTTTTGCATGCTCGTATATAAGCCTGCTTTGCTTACGAGAAACCATTCCTTTTACATATTACCACAAGATTTAGTTTTAATATTCGCCTCATGTTTTATGCGGGGGGTGCTAAACTAGTTTTTGTAAGTTATGAGCCAAGTGTATGATTGCCATAGAAGAGCACCAATTTTATTACTCTTTCTATCCTTTGAAGGGAAAATGAAAACCAACTAAATTTGAGATCTCACTGGGCTAAAAGAGCACTAGCCTGTTGAAGAATTCAATGATTGTTGGTAATAGAAATGACCACCCTAAGTATCAGCTACAAGTAATCGATTATCATCTCATTTACTCTCTTGCTACAACTTACTTACATGTTAGAGAATGCCTATCTTTTTTCTTTCCTAAGGTTTATAACATCATGGTACTGCATGTTGTTAGCTTGTTCAGCCCGGATGGCTGCCTTGCTGATTCAGTTGGACACTGTACCCTAGTTTTCATCTGGCTTTCCTTTTGTCCTAGTCAACTTGCTGGCTGGAAAGTGCAACCTTGCCATGAGTGGTCGTGGTGCTCGTAACTTCTTGTCAAAACCCCTCACACAAACAAATCCTGTGAAATACAGTTCTTTGTCAGAAAACAAATAAAAGGTTTTGCAGTTAACACTTTTCCCCCCTAGCTACATGAACAATTATTACTTCCTTATAATTTTGTTTTTATGATTTGATCCAAAGAGTAAGGCAAAAGGGAAAGTCGCTGACATGCTTGGTGCTCATGCCGGCTTAATTTGAGTCTTTTTGAATTTGCATAATGATGTAACATGCATGCTGATTTACTTGGTAGAAATGGATAAGAAGCTTAGACAAGCATTTGGACCTCTGAACCTGAGGTTTTCAAACTACATACCTCTCCAAAAGCAATGTTGGATACTTTCTGTGGTTAGGCCTGATTAACAGAGAACACACATACTGTTATTTTACTCCGAAATCTTTTTAAAAAATAAATAGGTTTCATTCTTTAGTTTGTTTACCTTTGAATATTGATGGTATAGAGGTTCCGAAGTAAACTGTTCGTCGCGGCAGATTCCATAGCCAATTTCTTGGGACATCAATTGGCTTGAGGCTGGATTCATGGTCTGCAAACACCTGAGGAATAGCAAAATTGTTACTATTAAAGCCTTATCAAATGCAAAAAATGCTCGCTCGAGTTGAGGAAACGTTGGTTGTATTCACCTCGTTAACCTGGAAGTATGTACCATTGAGCGGAAAGCTACCTCTCATAGCTGTTCTACATGGTATCTGTTAGAAAGTATATTCAGAGATGATCAGGATTATCGTATCACTTTCCCATGACATACACTAAAACAGTTTGTTCTCTTCTCTTACCAGAATTGTCCCTCTCACAGTTTGTGCATGTGCTTCACGTATGCTGTTGCATGCAAAACATGTTTCATCATCACATAGTCTACCAGTTTCTTGGGAGTTGCATTGTCTTCCCGGTGGCTGAATAGAATCCGAAGTTTCACCTGATACGGGTTTGGTACATAAGGGAGTATTAATCTATAGAGAGACTGATGAAAAGCTTGACCTATTTAGCGCAATTACCCTCTACTACTGCAGTGCA-ACTACTACTGAGATTGGAACCTGGGACTTGCTCAGTCCAGCTTAGCTATGCAGAAGTGTTCCTTACAATCATGAGTTCTCTAATTAATCAGCTTACAGATAGGAACCGGTTACTTTGCATTGTTTTCAAAAGGGCTCCTCTCTTATGTGCTATATTACATTAATTGAAATTACCCTCTACTACTGCAGTGCAACTACTACAGAGATTGGAACCTGGGACTTGCCCAGTCCAGCTTAGCTATGCAGAAGTGTTCCTTACAATCATGAGTTCTCTAATTAAGCAGCTTACAGATAGGAACCGGTTACTTTGCATTGTTTTCGAAAGGGCTTATGTGCTATATTACATTAATTGAAATCTTACCAGGTGTCCATATTGCCAGAAGATAGGAGGATGGATCATCTGGTTCTCTTTTCTCGAACTGCAACATGAAAAGATGTAATTATCAGGAGGATCAATTTAAATATAAGCTTACATGCTGCTTATATATGGATTTACAACT--T--AGTATTTAACCAATCAAAAAT</genome_strand>
        <mrna_strand>CATGGATATACTTCGAAATCTCTATATAGAGCTACGGATATTCAGCTTCTTATGATTGTTCTGAAGTTCTCCA-GAGCGTTGTTGATATAGATTGATGTTTCAACTTGAATATGCAGCATCGGTTATGACTATTGGAGATCTCTTTCATTGATGCTTTT--G................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTGAGAGATGTTCTCCATGTTCTTCCGATGACAGTTAATAAGGTTTTCTCAGCTTCAAACAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGTCCCTCTCACAGTTTGAGCATGTGCTTCACGTATGCTGTTGCATGCAAAACATGTTTCATCATCACATAGTCTACCAGTTTCTTGGGAGTTGCACTGTCTTCCCGGTGGCTGAATAGAATCCGATGTTTCACCTGATATGGGTTTGGTACATAAGGGAGTATTAATCTATAGACTGCCTGAGGAAAAGC-TAACCTATTTAGCCAAATTACCCTCTACCACTGCAGCACATACTACTACTGAGATTGGAACCTGGGACTTGCTCAGTCCAGCTTAGCTATGCAGAAGTGTTCCTTACAATCATGAGTTCTCTAATTAATCAGCTTACAGATAGGAACCGGTTACTTTGCATAGTTTT-AAAAGGGCTCCT...........................................................................................................................................................................................CTTATGTGTTATATTACATTAATTGAAATCTTACCAGGTGTCCATATTGCTAGAAGATANGAGGATGGATCATCTGGTTCTCTTTTCTCGAACTGGCACATGANNAGATGTAATTATCAGGAGGATCNATTT-AATATAAGCTTACATGCTGCTTATAGATGGATATAAAACTGATGCAGTATTTAACCAATCAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E425833" ref_strand="-" ref_description="SGN-E425833 [STM-45-L15]">
      <seq>gagctacggatattcagcttcttatgatngttctgaagttctccagagcgttgttgatatagattgatgtttcaacttgaatatgcagcatcggttatgactattggagatctctttcattgatgcttttgaggttgagagatgttctccatgttcttccgatgacagttaataaggttttctcagcttcaaacaaagaattgtccctctcacagtttgagcatgtgcttcacgtatgctgttgcatgcaaaacatgtttcatcatcacatagtctaccagtttcttgggagttgcactgtcttcccggtggctgaatagaatccgatgtttcacctgatatgggtttggtacataagggagtattaatctatagactgcctgaggaaaagctaacctatttagccaaattaccctctaccactgcagcacatactactactgagattggaacctgggacttgctcagtccagcttagctatgcagaagtgttccttacaatcatgagttctctaattaatcagcttacagataggaaccggttactttgcatagttttaaaagggctcctcttatgtgttatattacattaattgaaatcttaccaggtgtccatattgctagaagataggaggatggatcatctggttctcttttctcgaactgcaacatgaaaagatgtaattatcaggaggatcaatttaaatataagcttacatgctgcttatagatggatataagaaagatgcagtattaaccaatcaaaaagaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="29453" stop="24121"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29153" g_stop="29022" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="133" r_length="133" r_score="0.924"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29021" i_stop="27006" i_length="2016">
            <donor d_prob="0.977" d_score="0.94"/>
            <acceptor a_prob="0.855" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27005" g_stop="26940" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="134" r_stop="198" r_length="65" r_score="0.924"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26939" i_stop="25150" i_length="1790">
            <donor d_prob="0.956" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25149" g_stop="24776" g_length="374"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="571" r_length="373" r_score="0.949"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24775" i_stop="24589" i_length="187">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24588" g_stop="24426" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="572" r_stop="734" r_length="163" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E425833" ref_strand="-">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>735</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E425833" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="29153" e_stop="29022"/>
          <exon e_start="27005" e_stop="26940"/>
          <exon e_start="25149" e_stop="24776"/>
          <exon e_start="24588" e_stop="24426"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGCTAC-GATATTCAGCTTCTCATGATTGTTCTGAAGTTCTCCAGGAGCGTTGTTGATTTGGATTGATGTTTCAACTTGAATATGCAGCATCGG-TATGACTATTTGAGATCTCTTTCATTGATGCTTTTGAGGTGATTTACGTGCTTATTGTAGTTTATTTGAATTCATAATATTGATTATGAGATCTCTCTCCCTGTGCTATTGATTATGAGTACATGAGATCTCTCTGCGATTGAGATAGCAATTACTTGAAAACATGAAAATAGATGTTTTGAGGTGATTGATATGACAATTATAGTTGAAATGAAGTTTGAATTCACAGCATTGATTATGAGCACATGAGATCTCTGTGCTTGAGATAGTAATTACTTAGAAACATGAAAATAGATGTTTTGAGGTGATTGATGTGCTAATTATAGACTTGTAGTTGAAATGAAGTTTGAATTCACAGCATTGATTATGAGCACACGAGATCTCTGTCACTGAGGTGTTTGTTACGTGGTTATTTGAAAATACGACAATAGATGCCGCTGTGGTTACTGATCTGCAAAGTTTAGTCGAAATGAAGTATATTTGAATTTATAGAATGATTATGAGTACATGAGACGTCTCTGTCCTTGAGATGTTTGTTGAGTAATTATTTGAAATATGAAAATAGATGCAGTTGAGGTTACTGATCTGTAAAGTTTAGTCCAAATGAAGTATATTTGAATTTATAGAATGATTATGAGTACATGAGATGTCTCTGTCCTTGAGATGTTTGTTAAGTAATTATTTGAAAATATGAAATAGATGCAGTTGAGGTTACTGATCTGTAAAGTTTAGTCGAAATGAAGTATATTTGAATTTATAGCATGATTATGAGTACATGAGATGTTTCTGTCCTTGAGATGTTTGTTAAGTAATTATTTGAAAACTTGAGAATAGATGCTTTTGAGGTGATTGATGTGCTAGTCAAAATGAAGTTTGTTTGAATTTACAGCATTGATTACGAGTACATGAGATCTATCTGTCATTGAGATATTTGTTAGTTAATTATTTGAAAACACATAATTGATGCTTTTGAGGTGATTGATGTGCTAATGATAGTCGAAGTGTAAGTTCATTTGAATTTACAACATTGATTACGAGTACATTAAATCTCTATATGATTGAGATATTTGTTAGGTAATTACTTGGAAAGATGAAAAATGGATGCAGCTGAGGGGATTGATGTGCAAATTGTAGTTGAAATGAAGTTTAGTTGAATTTATAGCATGACAATGAGTACATGAGATTTCTCTGTAATTGAGATATTCGTTAGGTAATTACTTGGAAACATGAAAATAGATGCAGTCGAGGTGATTGGTGTGCAAATTGTATTCGCAGTGAAGTTCTTTCGAACATGTTGTATTGATTATGTGTACATGGGATTTCTCTGTCATTGAGGTATGTGTTAAGTGATTGTTTCAAAACATGAAAATAGATGTTTTTGAGGTGATTGACGTGTGAATTGTAGTCGAAATGAAGTTATTTGAATTTATAGCATTGATTATGAGTACATGAGATTGCTCTGTGTTTGGGATACCTGTTAAGTAATTACTTGAAAACATGAAAATAGATGCCTTCTGAGGTGATTAACGTGCATGGTAGGTGTAGTCAGATTGAAGTTGTAACACAGTGATATAAACATCGATGGCAGTTTCTAGAGGAATCTGCGGTCAACAGCGGGATTTTGCAGTGAGATGCATGTTACTTTGCGAGGTGAATATATGCCTTTATGATGGCTTTATTACTAGTTTGTAAACTTCAAATTAAAGTGTAAAGTGGTCATATGTTGATCGTGGTTTAAGATGAATATGAGTTATTCCGTTAGTTGGTTTCCTTATATATCTTGGTGTTAATGTGCTTTAACTCAAAAAGAACGAGTTATATGAGTTTGTTTGCTTCTAAAATCTCTTCTTCATATGTTCTGTATGTCAAAAGCTACAGGAAGTTGATGACAGATCCATTGAGACGTCAAACTCAAGGGCTTTTGGCTCAAATATGAAAGCAGATATATAGTTTAAAACCCACCCTCTCACTTAAAGTTCTTCATTCTAAAATTTCAATATGCTAATGCTACTACACATGTTTATGCTCATCTTATTGCTAATGCCTATGTATAGAGGTTGAGAGATG-TCTCCATGCTCTTCCGATGACAGTTAATAAGGTTTTCTCAGCTTCAAACAAAGGTATGATGTAAGAAAAAAACAGCTGTTAGGACTTCCAAGTGTCTTTATGCATCTACTTTCAGTTGTGATTTTCAAAACTGTATGTCTAGCTAGTAGTTGCAAACAGCAGATGTAATTGTTAGATGTATTTCCGTGATGTCTTGGCTGACTTATGAAGTATTTATGAAGTATGAATAGCGTATTATTTCAAGCTAATCTCTACAAGGGTGCTAGTATCATGAATAGAATGAGTATATTCGTATAGTCCTTGCTAGTCCTGTTTTTTATATTACAAATACTCCTTGCTAGTCCTGTTTTTTATATTTACCCTCGAGTCTTCCTTATGTTTAGTTGAGACAGTTCACATTATAACATTGTTAACTTGTTCAAACTATTGCTACTTGTTGGTGCAGCTCCCGTCTTTAACAAAAATGGGTTTATAGATATTTTTGCATGCTCGTATATAAGCCTGCTTTGCTTACGAGAAACCATTCCTTTTACATATTACCACAAGATTTAGTTTTAATATTCGCCTCATGTTTTATGCGGGGGGTGCTAAACTAGTTTTTGTAAGTTATGAGCCAAGTGTATGATTGCCATAGAAGAGCACCAATTTTATTACTCTTTCTATCCTTTGAAGGGAAAATGAAAACCAACTAAATTTGAGATCTCACTGGGCTAAAAGAGCACTAGCCTGTTGAAGAATTCAATGATTGTTGGTAATAGAAATGACCACCCTAAGTATCAGCTACAAGTAATCGATTATCATCTCATTTACTCTCTTGCTACAACTTACTTACATGTTAGAGAATGCCTATCTTTTTTCTTTCCTAAGGTTTATAACATCATGGTACTGCATGTTGTTAGCTTGTTCAGCCCGGATGGCTGCCTTGCTGATTCAGTTGGACACTGTACCCTAGTTTTCATCTGGCTTTCCTTTTGTCCTAGTCAACTTGCTGGCTGGAAAGTGCAACCTTGCCATGAGTGGTCGTGGTGCTCGTAACTTCTTGTCAAAACCCCTCACACAAACAAATCCTGTGAAATACAGTTCTTTGTCAGAAAACAAATAAAAGGTTTTGCAGTTAACACTTTTCCCCCCTAGCTACATGAACAATTATTACTTCCTTATAATTTTGTTTTTATGATTTGATCCAAAGAGTAAGGCAAAAGGGAAAGTCGCTGACATGCTTGGTGCTCATGCCGGCTTAATTTGAGTCTTTTTGAATTTGCATAATGATGTAACATGCATGCTGATTTACTTGGTAGAAATGGATAAGAAGCTTAGACAAGCATTTGGACCTCTGAACCTGAGGTTTTCAAACTACATACCTCTCCAAAAGCAATGTTGGATACTTTCTGTGGTTAGGCCTGATTAACAGAGAACACACATACTGTTATTTTACTCCGAAATCTTTTTAAAAAATAAATAGGTTTCATTCTTTAGTTTGTTTACCTTTGAATATTGATGGTATAGAGGTTCCGAAGTAAACTGTTCGTCGCGGCAGATTCCATAGCCAATTTCTTGGGACATCAATTGGCTTGAGGCTGGATTCATGGTCTGCAAACACCTGAGGAATAGCAAAATTGTTACTATTAAAGCCTTATCAAATGCAAAAAATGCTCGCTCGAGTTGAGGAAACGTTGGTTGTATTCACCTCGTTAACCTGGAAGTATGTACCATTGAGCGGAAAGCTACCTCTCATAGCTGTTCTACATGGTATCTGTTAGAAAGTATATTCAGAGATGATCAGGATTATCGTATCACTTTCCCATGACATACACTAAAACAGTTTGTTCTCTTCTCTTACCAGAATTGTCCCTCTCACAGTTTGTGCATGTGCTTCACGTATGCTGTTGCATGCAAAACATGTTTCATCATCACATAGTCTACCAGTTTCTTGGGAGTTGCATTGTCTTCCCGGTGGCTGAATAGAATCCGAAGTTTCACCTGATACGGGTTTGGTACATAAGGGAGTATTAATCTATAGAGAGACTGATGAAAAGCTTGACCTATTTAGCGCAATTACCCTCTACTACTGCAGTGCA-ACTACTACTGAGATTGGAACCTGGGACTTGCTCAGTCCAGCTTAGCTATGCAGAAGTGTTCCTTACAATCATGAGTTCTCTAATTAATCAGCTTACAGATAGGAACCGGTTACTTTGCATTGTTTTCAAAAGGGCTCCTCTCTTATGTGCTATATTACATTAATTGAAATTACCCTCTACTACTGCAGTGCAACTACTACAGAGATTGGAACCTGGGACTTGCCCAGTCCAGCTTAGCTATGCAGAAGTGTTCCTTACAATCATGAGTTCTCTAATTAAGCAGCTTACAGATAGGAACCGGTTACTTTGCATTGTTTTCGAAAGGGCTTATGTGCTATATTACATTAATTGAAATCTTACCAGGTGTCCATATTGCCAGAAGATAGGAGGATGGATCATCTGGTTCTCTTTTCTCGAACTGCAACATGAAAAGATGTAATTATCAGGAGGATCAATTTAAATATAAGCTTACATGCTGCTTATATATGG</genome_strand>
        <mrna_strand>GAGCTACGGATATTCAGCTTCTTATGATNGTTCTGAAGTTCTCCAG-AGCGTTGTTGATATAGATTGATGTTTCAACTTGAATATGCAGCATCGGTTATGACTATTGGAGATCTCTTTCATTGATGCTTTTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................--GTTGAGAGATGTTCTCCATGTTCTTCCGATGACAGTTAATAAGGTTTTCTCAGCTTCAAACAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGTCCCTCTCACAGTTTGAGCATGTGCTTCACGTATGCTGTTGCATGCAAAACATGTTTCATCATCACATAGTCTACCAGTTTCTTGGGAGTTGCACTGTCTTCCCGGTGGCTGAATAGAATCCGATGTTTCACCTGATATGGGTTTGGTACATAAGGGAGTATTAATCTATAGACTGCCTGAGGAAAAGC-TAACCTATTTAGCCAAATTACCCTCTACCACTGCAGCACATACTACTACTGAGATTGGAACCTGGGACTTGCTCAGTCCAGCTTAGCTATGCAGAAGTGTTCCTTACAATCATGAGTTCTCTAATTAATCAGCTTACAGATAGGAACCGGTTACTTTGCATAGTTTT-AAAAGGGCTCCT...........................................................................................................................................................................................CTTATGTGTTATATTACATTAATTGAAATCTTACCAGGTGTCCATATTGCTAGAAGATAGGAGGATGGATCATCTGGTTCTCTTTTCTCGAACTGCAACATGAAAAGATGTAATTATCAGGAGGATCAATTTAAATATAAGCTTACATGCTGCTTATAGATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E455448" ref_strand="+" ref_description="SGN-E455448 [cSTS-26-G4]">
      <seq>catggatatacttcgaaatctctatatagagctacggatattcagcttcttatgattgttctgaagttctccagagcgttgttgatatagattgatgtttcaacttgaatatgcagcatcggttatgactattggagatctctttcattgatgcttttgaggttgagagatgttctccatgttcttccgatgacagttaataaggttttctcagcttcaaacaaagaattgtccctctcacagtttgagcatgtgcttcacgtatgctgttgcatgcaaaacatgtttcatcatcacatagtctaccagtttcttgggagttgcactgtcttcccggtggctgaatagaatccgatgtttcacctgatatgggtttggtacataagggagtattaatctatagactgcctgaggaaaagctaacctatttagccaaattaccctctaccactgcagcacatactactactgagattggaacctgngacttgctcagtccagcttagctatgcagaagtgttccttacaatcatgagttctctaattaatcagcttacagataggaaccggttactttgcatagttttaaaagggctcctcttatgtgttatattacattaattgaaatcttaccaggtgtccatattgctaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="29481" stop="24235"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29181" g_stop="29022" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="159" r_length="159" r_score="0.925"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29021" i_stop="27006" i_length="2016">
            <donor d_prob="0.977" d_score="0.90"/>
            <acceptor a_prob="0.855" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27005" g_stop="26940" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="160" r_stop="226" r_length="67" r_score="0.955"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26939" i_stop="25150" i_length="1790">
            <donor d_prob="0.956" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25149" g_stop="24776" g_length="374"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="599" r_length="373" r_score="0.947"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24775" i_stop="24589" i_length="187">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24588" g_stop="24535" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="600" r_stop="653" r_length="54" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E455448" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>654</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E455448" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29181" e_stop="29022"/>
          <exon e_start="27005" e_stop="26940"/>
          <exon e_start="25149" e_stop="24776"/>
          <exon e_start="24588" e_stop="24535"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGGATATACTTCGAAATCTCTATATTGAGCTAC-GATATTCAGCTTCTCATGATTGTTCTGAAGTTCTCCAGGAGCGTTGTTGATTTGGATTGATGTTTCAACTTGAATATGCAGCATCGG-TATGACTATTTGAGATCTCTTTCATTGATGCTTTTGAGGTGATTTACGTGCTTATTGTAGTTTATTTGAATTCATAATATTGATTATGAGATCTCTCTCCCTGTGCTATTGATTATGAGTACATGAGATCTCTCTGCGATTGAGATAGCAATTACTTGAAAACATGAAAATAGATGTTTTGAGGTGATTGATATGACAATTATAGTTGAAATGAAGTTTGAATTCACAGCATTGATTATGAGCACATGAGATCTCTGTGCTTGAGATAGTAATTACTTAGAAACATGAAAATAGATGTTTTGAGGTGATTGATGTGCTAATTATAGACTTGTAGTTGAAATGAAGTTTGAATTCACAGCATTGATTATGAGCACACGAGATCTCTGTCACTGAGGTGTTTGTTACGTGGTTATTTGAAAATACGACAATAGATGCCGCTGTGGTTACTGATCTGCAAAGTTTAGTCGAAATGAAGTATATTTGAATTTATAGAATGATTATGAGTACATGAGACGTCTCTGTCCTTGAGATGTTTGTTGAGTAATTATTTGAAATATGAAAATAGATGCAGTTGAGGTTACTGATCTGTAAAGTTTAGTCCAAATGAAGTATATTTGAATTTATAGAATGATTATGAGTACATGAGATGTCTCTGTCCTTGAGATGTTTGTTAAGTAATTATTTGAAAATATGAAATAGATGCAGTTGAGGTTACTGATCTGTAAAGTTTAGTCGAAATGAAGTATATTTGAATTTATAGCATGATTATGAGTACATGAGATGTTTCTGTCCTTGAGATGTTTGTTAAGTAATTATTTGAAAACTTGAGAATAGATGCTTTTGAGGTGATTGATGTGCTAGTCAAAATGAAGTTTGTTTGAATTTACAGCATTGATTACGAGTACATGAGATCTATCTGTCATTGAGATATTTGTTAGTTAATTATTTGAAAACACATAATTGATGCTTTTGAGGTGATTGATGTGCTAATGATAGTCGAAGTGTAAGTTCATTTGAATTTACAACATTGATTACGAGTACATTAAATCTCTATATGATTGAGATATTTGTTAGGTAATTACTTGGAAAGATGAAAAATGGATGCAGCTGAGGGGATTGATGTGCAAATTGTAGTTGAAATGAAGTTTAGTTGAATTTATAGCATGACAATGAGTACATGAGATTTCTCTGTAATTGAGATATTCGTTAGGTAATTACTTGGAAACATGAAAATAGATGCAGTCGAGGTGATTGGTGTGCAAATTGTATTCGCAGTGAAGTTCTTTCGAACATGTTGTATTGATTATGTGTACATGGGATTTCTCTGTCATTGAGGTATGTGTTAAGTGATTGTTTCAAAACATGAAAATAGATGTTTTTGAGGTGATTGACGTGTGAATTGTAGTCGAAATGAAGTTATTTGAATTTATAGCATTGATTATGAGTACATGAGATTGCTCTGTGTTTGGGATACCTGTTAAGTAATTACTTGAAAACATGAAAATAGATGCCTTCTGAGGTGATTAACGTGCATGGTAGGTGTAGTCAGATTGAAGTTGTAACACAGTGATATAAACATCGATGGCAGTTTCTAGAGGAATCTGCGGTCAACAGCGGGATTTTGCAGTGAGATGCATGTTACTTTGCGAGGTGAATATATGCCTTTATGATGGCTTTATTACTAGTTTGTAAACTTCAAATTAAAGTGTAAAGTGGTCATATGTTGATCGTGGTTTAAGATGAATATGAGTTATTCCGTTAGTTGGTTTCCTTATATATCTTGGTGTTAATGTGCTTTAACTCAAAAAGAACGAGTTATATGAGTTTGTTTGCTTCTAAAATCTCTTCTTCATATGTTCTGTATGTCAAAAGCTACAGGAAGTTGATGACAGATCCATTGAGACGTCAAACTCAAGGGCTTTTGGCTCAAATATGAAAGCAGATATATAGTTTAAAACCCACCCTCTCACTTAAAGTTCTTCATTCTAAAATTTCAATATGCTAATGCTACTACACATGTTTATGCTCATCTTATTGCTAATGCCTATGTATAGAGGTTGAGAGATG-TCTCCATGCTCTTCCGATGACAGTTAATAAGGTTTTCTCAGCTTCAAACAAAGGTATGATGTAAGAAAAAAACAGCTGTTAGGACTTCCAAGTGTCTTTATGCATCTACTTTCAGTTGTGATTTTCAAAACTGTATGTCTAGCTAGTAGTTGCAAACAGCAGATGTAATTGTTAGATGTATTTCCGTGATGTCTTGGCTGACTTATGAAGTATTTATGAAGTATGAATAGCGTATTATTTCAAGCTAATCTCTACAAGGGTGCTAGTATCATGAATAGAATGAGTATATTCGTATAGTCCTTGCTAGTCCTGTTTTTTATATTACAAATACTCCTTGCTAGTCCTGTTTTTTATATTTACCCTCGAGTCTTCCTTATGTTTAGTTGAGACAGTTCACATTATAACATTGTTAACTTGTTCAAACTATTGCTACTTGTTGGTGCAGCTCCCGTCTTTAACAAAAATGGGTTTATAGATATTTTTGCATGCTCGTATATAAGCCTGCTTTGCTTACGAGAAACCATTCCTTTTACATATTACCACAAGATTTAGTTTTAATATTCGCCTCATGTTTTATGCGGGGGGTGCTAAACTAGTTTTTGTAAGTTATGAGCCAAGTGTATGATTGCCATAGAAGAGCACCAATTTTATTACTCTTTCTATCCTTTGAAGGGAAAATGAAAACCAACTAAATTTGAGATCTCACTGGGCTAAAAGAGCACTAGCCTGTTGAAGAATTCAATGATTGTTGGTAATAGAAATGACCACCCTAAGTATCAGCTACAAGTAATCGATTATCATCTCATTTACTCTCTTGCTACAACTTACTTACATGTTAGAGAATGCCTATCTTTTTTCTTTCCTAAGGTTTATAACATCATGGTACTGCATGTTGTTAGCTTGTTCAGCCCGGATGGCTGCCTTGCTGATTCAGTTGGACACTGTACCCTAGTTTTCATCTGGCTTTCCTTTTGTCCTAGTCAACTTGCTGGCTGGAAAGTGCAACCTTGCCATGAGTGGTCGTGGTGCTCGTAACTTCTTGTCAAAACCCCTCACACAAACAAATCCTGTGAAATACAGTTCTTTGTCAGAAAACAAATAAAAGGTTTTGCAGTTAACACTTTTCCCCCCTAGCTACATGAACAATTATTACTTCCTTATAATTTTGTTTTTATGATTTGATCCAAAGAGTAAGGCAAAAGGGAAAGTCGCTGACATGCTTGGTGCTCATGCCGGCTTAATTTGAGTCTTTTTGAATTTGCATAATGATGTAACATGCATGCTGATTTACTTGGTAGAAATGGATAAGAAGCTTAGACAAGCATTTGGACCTCTGAACCTGAGGTTTTCAAACTACATACCTCTCCAAAAGCAATGTTGGATACTTTCTGTGGTTAGGCCTGATTAACAGAGAACACACATACTGTTATTTTACTCCGAAATCTTTTTAAAAAATAAATAGGTTTCATTCTTTAGTTTGTTTACCTTTGAATATTGATGGTATAGAGGTTCCGAAGTAAACTGTTCGTCGCGGCAGATTCCATAGCCAATTTCTTGGGACATCAATTGGCTTGAGGCTGGATTCATGGTCTGCAAACACCTGAGGAATAGCAAAATTGTTACTATTAAAGCCTTATCAAATGCAAAAAATGCTCGCTCGAGTTGAGGAAACGTTGGTTGTATTCACCTCGTTAACCTGGAAGTATGTACCATTGAGCGGAAAGCTACCTCTCATAGCTGTTCTACATGGTATCTGTTAGAAAGTATATTCAGAGATGATCAGGATTATCGTATCACTTTCCCATGACATACACTAAAACAGTTTGTTCTCTTCTCTTACCAGAATTGTCCCTCTCACAGTTTGTGCATGTGCTTCACGTATGCTGTTGCATGCAAAACATGTTTCATCATCACATAGTCTACCAGTTTCTTGGGAGTTGCATTGTCTTCCCGGTGGCTGAATAGAATCCGAAGTTTCACCTGATACGGGTTTGGTACATAAGGGAGTATTAATCTATAGAGAGACTGATGAAAAGCTTGACCTATTTAGCGCAATTACCCTCTACTACTGCAGTGCA-ACTACTACTGAGATTGGAACCTGGGACTTGCTCAGTCCAGCTTAGCTATGCAGAAGTGTTCCTTACAATCATGAGTTCTCTAATTAATCAGCTTACAGATAGGAACCGGTTACTTTGCATTGTTTTCAAAAGGGCTCCTCTCTTATGTGCTATATTACATTAATTGAAATTACCCTCTACTACTGCAGTGCAACTACTACAGAGATTGGAACCTGGGACTTGCCCAGTCCAGCTTAGCTATGCAGAAGTGTTCCTTACAATCATGAGTTCTCTAATTAAGCAGCTTACAGATAGGAACCGGTTACTTTGCATTGTTTTCGAAAGGGCTTATGTGCTATATTACATTAATTGAAATCTTACCAGGTGTCCATATTGCCAGA</genome_strand>
        <mrna_strand>CATGGATATACTTCGAAATCTCTATATAGAGCTACGGATATTCAGCTTCTTATGATTGTTCTGAAGTTCTCCA-GAGCGTTGTTGATATAGATTGATGTTTCAACTTGAATATGCAGCATCGGTTATGACTATTGGAGATCTCTTTCATTGATGCTTTT--G................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTGAGAGATGTTCTCCATGTTCTTCCGATGACAGTTAATAAGGTTTTCTCAGCTTCAAACAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGTCCCTCTCACAGTTTGAGCATGTGCTTCACGTATGCTGTTGCATGCAAAACATGTTTCATCATCACATAGTCTACCAGTTTCTTGGGAGTTGCACTGTCTTCCCGGTGGCTGAATAGAATCCGATGTTTCACCTGATATGGGTTTGGTACATAAGGGAGTATTAATCTATAGACTGCCTGAGGAAAAGC-TAACCTATTTAGCCAAATTACCCTCTACCACTGCAGCACATACTACTACTGAGATTGGAACCTGNGACTTGCTCAGTCCAGCTTAGCTATGCAGAAGTGTTCCTTACAATCATGAGTTCTCTAATTAATCAGCTTACAGATAGGAACCGGTTACTTTGCATAGTTTT-AAAAGGGCTCCT...........................................................................................................................................................................................CTTATGTGTTATATTACATTAATTGAAATCTTACCAGGTGTCCATATTGCTAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E423086" ref_strand="-" ref_description="SGN-E423086 [STM-41-B13]">
      <seq>caagccaattgatgtcccaagaaattggctatgggatctgccacgacggacagtttacttcggaacctctataccatcaatattcaaaggcctaaccacagaaagtatccaacattgcttttggagaggatttgtttgtgtgaggggttttgacaagaagttacgagccccaagaccactgatggcaaggttgcactttccagccagcaagttgactaggacaaaaggaaagccagatgaaaactagggtacagtgtccaactgaatcagcaaggcagccatccgggctgaagaagctaacaacattcagtaccatgatgttttaaaccttagaaaagaaagaagataggtattctctaacatgtaagtaagttgtagcaagagagtaaatgagatgataatcgattacttgtagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="25119" stop="26514"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25419" g_stop="25507" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="89" r_length="89" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25508" i_stop="25592" i_length="85">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.953" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25593" g_stop="25631" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="128" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25632" i_stop="25925" i_length="294">
            <donor d_prob="0.979" d_score="0.00"/>
            <acceptor a_prob="0.986" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25926" g_stop="26214" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="417" r_length="289" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E423086" ref_strand="-">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>417</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E423086" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="25419" e_stop="25507"/>
          <exon e_start="25593" e_stop="25631"/>
          <exon e_start="25926" e_stop="26214"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGCCAATTGATGTCCCAAGAAATTGGCTATGGAATCTGCCGCGACGAACAGTTTACTTCGGAACCTCTATACCATCAATATTCAAAGGTAAACAAACTAAAGAATGAAACCTATTTATTTTTTAAAAAGATTTCGGAGTAAAATAACAGTATGTGTGTTCTCTGTTAATCAGGCCTAACCACAGAAAGTATCCAACATTGCTTTTGGAGAGGTATGTAGTTTGAAAACCTCAGGTTCAGAGGTCCAAATGCTTGTCTAAGCTTCTTATCCATTTCTACCAAGTAAATCAGCATGCATGTTACATCATTATGCAAATTCAAAAAGACTCAAATTAAGCCGGCATGAGCACCAAGCATGTCAGCGACTTTCCCTTTTGCCTTACTCTTTGGATCAAATCATAAAAACAAAATTATAAGGAAGTAATAATTGTTCATGTAGCTAGGGGGGAAAAGTGTTAACTGCAAAACCTTTTATTTGTTTTCTGACAAAGAACTGTATTTCACAGGATTTGTTTGTGTGAGGGGTTTTGACAAGAAGTTACGAGCACCACGACCACTCATGGCAAGGTTGCACTTTCCAGCCAGCAAGTTGACTAGGACAAAAGGAAAGCCAGATGAAAACTAGGGTACAGTGTCCAACTGAATCAGCAAGGCAGCCATCCGGGCTGAACAAGCTAACAACATGCAGTACCATGATGTTATAAACCTTAGGAAAGAAAAAAGATAGGCATTCTCTAACATGTAAGTAAGTTGTAGCAAGAGAGTAAATGAGATGATAATCGATTACTTGTAGCT</genome_strand>
        <mrna_strand>CAAGCCAATTGATGTCCCAAGAAATTGGCTATGGGATCTGCCACGACGGACAGTTTACTTCGGAACCTCTATACCATCAATATTCAAAG.....................................................................................GCCTAACCACAGAAAGTATCCAACATTGCTTTTGGAGAG......................................................................................................................................................................................................................................................................................................GATTTGTTTGTGTGAGGGGTTTTGACAAGAAGTTACGAGCCCCAAGACCACTGATGGCAAGGTTGCACTTTCCAGCCAGCAAGTTGACTAGGACAAAAGGAAAGCCAGATGAAAACTAGGGTACAGTGTCCAACTGAATCAGCAAGGCAGCCATCCGGGCTGAAGAAGCTAACAACATTCAGTACCATGATGTTTTAAACCTTAGAAAAGAAAGAAGATAGGTATTCTCTAACATGTAAGTAAGTTGTAGCAAGAGAGTAAATGAGATGATAATCGATTACTTGTAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E587067" ref_strand="+" ref_description="SGN-E587067 [78180]">
      <seq>gtttgtgtgaggggttttgacaagaagttacgagccccaagaccactgatggcaaggttgcactttccagccagcaagttgactaggacaaaaggaaagccagatgaaaactagggtacagtgtccaactgaatcagcaaggcagccatccgggctgaagaagctaacaacattcagtaccatgatgtttaaaaccttagaaaagaaagaagataggtattctctaacatgtaagtaagttgtagcaagagagtaaatgagatgataatcgattacttgtagctgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="25631" stop="26517"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25931" g_stop="26217" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="287" r_length="287" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E587067" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>287</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E587067" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25931" e_stop="26217"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTGTGTGAGGGGTTTTGACAAGAAGTTACGAGCACCACGACCACTCATGGCAAGGTTGCACTTTCCAGCCAGCAAGTTGACTAGGACAAAAGGAAAGCCAGATGAAAACTAGGGTACAGTGTCCAACTGAATCAGCAAGGCAGCCATCCGGGCTGAACAAGCTAACAACATGCAGTACCATGATGTTATAAACCTTAGGAAAGAAAAAAGATAGGCATTCTCTAACATGTAAGTAAGTTGTAGCAAGAGAGTAAATGAGATGATAATCGATTACTTGTAGCTGAT</genome_strand>
        <mrna_strand>GTTTGTGTGAGGGGTTTTGACAAGAAGTTACGAGCCCCAAGACCACTGATGGCAAGGTTGCACTTTCCAGCCAGCAAGTTGACTAGGACAAAAGGAAAGCCAGATGAAAACTAGGGTACAGTGTCCAACTGAATCAGCAAGGCAGCCATCCGGGCTGAAGAAGCTAACAACATTCAGTACCATGATGTTTAAAACCTTAGAAAAGAAAGAAGATAGGTATTCTCTAACATGTAAGTAAGTTGTAGCAAGAGAGTAAATGAGATGATAATCGATTACTTGTAGCTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E747472" ref_strand="+" ref_description="SGN-E747472 [GI|40781627]">
      <seq>aagcttataaacgaatcaaattaatatacacatacttttctgacatatttatacatttaatattccgatgtgcttttaagtcaagtgcttactgttcttatgaactcaaatcagtcaaaagtcataagcttatcatctctaagtcgtaatttttcagcttataagcatttttggattgatcggaaacggaagaaagtgaggccaaatgggttgtaagagtaatacttgaaattatatagggaatcatttgaaatatgataaaagtagaggggagtttaatataattaagttaaacttataacttaaagtcgaaaattccaggaatattacgactaaaacaagacttcccccatcttttttttctctcacttctcattcgacaagtacgaagaagaagaagaaaagagagaaaacttttagtgagagaaagtctttgagagagagagggagttgaagctatagtgtaatgaacaatttctagctagggttttgttgaattgataaattattgagatggaaatgtctactagacgatcgaattatactttgttgagtcaagttgcagatgacaattaccttcctccgccaccgaagtactccgtcactggcggtggcggtggaggtggaggagtagcaccgtattatgagtctcattctggtgaaaagggtaaaggcaaaacaggtgataatagaggatttgattgggatttgagtgatcaccgtagtaatatgatgcaagcgtcgaatcggatcggtgcggcggcatttccaggttcgattggcttgcagaggcaatcaagtgggagcagctttggtgaaagttcgatctccggggagtattacatgccgtcgttgtctaatgcggaggcgtcatttggatatctcaatgatggcggtggcggtgctgaagtgaggatgaagccgttggaagctaatttgttcggtggctcgtcttctaagagctgggcgcagcagactgaggagagttatcagctgcagttagctttggctttacggctttcttccgaagctacctgtgctgatgatccaaattttttggatcatgtgcctgatgaatccgcatcccgtgcttcagcttcagctgcttcggcggagaccctttcccatcgattctgggtaaatggatgcttgtcgtactttgacaaagtgcctgatggattttacttgatccatgggatggatccatatgtctggattgtctgctcagatctacaagaaaatgcccgggttccatctattgaatcaatgagagctgttgatccctctgtagtaccatcagttgaagtgattttgattgatcggcgtacggatccaagcttgaaagaactgcagaatcggatccatagtctctctcctacttgtggcacaacaaaagaagttgttgatcagcttgctcagctggtctgcagtcatatggggggcgcaacttctgccggagaagatgagttggttcctttgtggaaggagtgtagttatgagctgaaggattgtctaggatccactgtgcttcccattggtagcctgtctgttggcctttgcaggcatcgagctttgctatttaaagttctagctgacgccattggtttaccatgtcgaattgccaaaggatgtaaatattgtaacagagctgatgcttcctcatgtttagttcgttttggacctgacagggagtacctggttgatttgattgggagccctggatgcttatgcgaaccagattcctcgctcaacggcccatcttctatctcaatctcttcaccattgcgatttccgagattcagagaagttgaaccgacaactgatttcaggtcacttgccaaacagtatttctcggattgtcaatcgcttaatcttgtgtttgaggaatcttcagcaggagctgctgttgatggagacgcaggacaaactgaccgaaataacattgagagaaacagtgctgtcactggtccaagtaaccgtgatgaagtttctcggttacctgtgcctgcaattagggacatggctcctgtgaagtatgtccgtccagttttgcatggagatacacaattatcagacccaagagatatagggaatgatatgcgatttcttgagagaggaagtcaacttgttccctctaaaataagtagagacattgcccttgaaatagaagattttgatataccctgggaagatcttgttctgaaggagaggattggggcagggtcttttggtactgttcaccgtgctgattggaatggttctgatgttgctgtgaagatactcatggaacaagattttcatgcagagcgattcaaggaatttttgcgggaggttgcaattatgaagcggttgcgacacccaaatattgtgctttttatgggtgcagttactcagcgaccaaacttgtccatagttacagaatatttatcaagaggtagcttatatagacttcttcataaacctggtgctagggaggttttggatgaaaggcgtcggttgtctatggcatatgatgtggcaaaggggatgaattatctacataaacgcaatcctcccatcgttcatagagatttgaaatctccaaatcttttagtggacaaaaaatacacagtgaaggtctgtgattttggcctttctcgtttaaaagcgaacacatttctctcgtcaaagtctgctgctgggactccggaatggatggcacctgaagttcttcgtgatgaaccatcaaatgagaaatctgatgtatacagctttggtgttattttgtgggagctggcaacgttgcaacagccttggagtaatttgaacccagcacaggttgtagcagctgtgggctttaaggggaaaagactcgacattccacgtgacttgactcctcaagtggcaagcattatagaggcttgctgggccaaagaaccatggaaacgtccctcctttgctgcaatcatggatatgctgagaccactaattaaacctcctgtaacacctcctcaaccaggccgtacagacacgcagttgattgcgtgaatgcgtgtaatagatgtatgatttctgcacatatttggcattctttgttaatcatcttctgggaggaacaaatctttgtttacttcaggcttttgttccgtacatattagttcagaatgcccgtctagagccattttttttcttcacaaattcaagcagccatttctcccagaagagcatttgcaattgacttgtacgtttcctcgtggaaataatgtctagccatatgattttgttaatgtaagcaaataacagttcttctattttctatcaagaaatgattttgtacgtacaagaatttataatgggaatgcacagttcgtatcaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="33845" stop="49995"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
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        <intron i_serial="1">
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            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41047" g_stop="41348" g_length="302"/>
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        <intron i_serial="2">
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            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="41436" g_stop="41580" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="1440" r_stop="1584" r_length="145" r_score="1.000"/>
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        <intron i_serial="3">
          <gDNA_intron_boundary i_start="41581" i_stop="41833" i_length="253">
            <donor d_prob="0.925" d_score="1.00"/>
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          </gDNA_intron_boundary>
        </intron>
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          <reference_exon_boundary r_type="cDNA" r_start="1585" r_stop="1688" r_length="104" r_score="1.000"/>
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        <intron i_serial="4">
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            <donor d_prob="0.939" d_score="1.00"/>
            <acceptor a_prob="0.678" a_score="1.00"/>
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          <gDNA_exon_boundary g_start="43201" g_stop="43409" g_length="209"/>
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            <donor d_prob="0.969" d_score="1.00"/>
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          <gDNA_exon_boundary g_start="45621" g_stop="45826" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="2016" r_stop="2221" r_length="206" r_score="1.000"/>
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        <intron i_serial="7">
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            <donor d_prob="0.991" d_score="1.00"/>
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          <gDNA_exon_boundary g_start="45967" g_stop="46007" g_length="41"/>
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            <donor d_prob="0.991" d_score="1.00"/>
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            <donor d_prob="0.353" d_score="1.00"/>
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            <donor d_prob="0.977" d_score="1.00"/>
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            <donor d_prob="0.955" d_score="1.00"/>
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      </exon-intron_info>
      <PPA_line polyA_start="3356" polyA_stop="3371"/>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E747472" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>3359</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E747472" rDNA_strand="+"/>
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      </PGS_line>
      <alignment>
        <genome_strand>AAGCTTATAAACGAATCAAATTAATATACACATACTTTTCTGACATATTTATACATTTAATAAAATATCCGATGTGCTTTTAAGTCAAGTGCTTACTGTTCTTATGAACTCAAATCAGTCAAAAGTCATAAGTTTATCATCTCTAAGTCGTAATTTTTCAGCTTATAAGCATTTTTGGATTGATCGGAAACGGAAGAAAGTGAGGCCAAATGGGTTGTAAGAGTAATACTTGAAATTATATAGGGAATCATTTGAAATATGATAAAAGTAGAGGGGAGTTTAATATAATTAAGTTAAACTTATAACTTAAAGTCGAAAATTCCAGGAATATTACGACTAAAACAAGACTTCCCCCATCTTTTTTTTCTCTCACTTCTCATTCGACAAGTACGAAGAAGAAGAAGAAAAGAGAGAAAACTTTTAGTGAGAGAAAGTCTTTGAGAGAGAGAGGGAGTTGAAGCTATAGTGTAATGAACAATTTCTAGCTAGGGTTTTGTTGAATTGATAAATTATTGAGATGGAAATGTCTACTAGACGATCGAATTATACTTTGTTGAGTCAAGTTGCAGATGACAATTACCTTCCTCCGCCACCGAAGTACTCCGTCACTGGCGGTGGCGGTGGAGGTGGAGGAGTAGCACCGTATTATGAGTCTCATTCTGGTGAAAAGGGTAAAGGCAAAACAGGTGATAATAGAGGATTTGATTGGGATTTGAGTGATCACCGTAGTAATATGATGCAAGCGTCGAATCGGATCGGTGCGGCGGCATTTCCAGGTTCGATTGGCTTGCAGAGGCAATCAAGTGGGAGCAGCTTTGGTGAAAGTTCGATCTCCGGGGAGTATTACATGCCGTCGTTGTCTAATGCGGAGGCGTCATTTGGATATCTCAATGATGGCGGTGGCGGTGCTGAAGTGAGGATGAAGCCGTTGGAAGCTAATTTGTTCGGTGGCTCGTCTTCTAAGAGCTGGGCGCAGCAGACTGAGGAGAGTTATCAGCTGCAGTTAGCTTTGGCTTTACGGCTTTCTTCCGAAGCTACCTGTGCTGATGATCCAAATTTTTTGGATCATGTGCCTGATGAATCCGCATCCCGTGCTTCAGCTTCAGCTGCTTCGGCGGAGACCCTTTCCCATCGATTCTGGGTATGGTTGGGTTATTGTTTTGTGTTGATTTTCCTTGTCGTCTATATTTATTTTCTCTGTCAATTGCCTTAATCCAATTATGATTTTAGCTGCAACAGAGGGAAATGTGTTCCTATTATGCTTAAGGTATGTGTTGAATAATTAGCATTGTACACACAAAAAAAATAGCTTGGTTTAGATTACAAATGATTCCAGGCTTTGAATTAGGTAACAGTTTGATGTAAAGGAAATGTTTTCCTTGGATCAACTAGGACTGTTTCGTTGGGTATATGTAGGTGACATAGACTACTTTTAGTCTTGTAGAAGTGGACTATATGGTGTTATGGTAGTGTTTTGGTGATACTTCTGAGTTCTGAGTATTAATAAAGGTTGACAATAATGTAGTAGTGTGGAAAAGTGGGAAAATGACTTCTGTCAAGAAGCAAGGGAAGCCATCTTTTTGTTTGCTGAGAAACTATTTATTGGGTAAGGTGATATTTTCCTGGAAAGTGTTTTCCGTCATACCAAACACAGAATCGACAAATGGATGTGTTCCTTCAAATGTAAGTGCACTGAATCAGTTTTGATAATATTTAAACTACTAGATCCTTTCATAATTTAAAGAAAGATATGTAGCTTCTATATTATTACTGCATCCGGATAGTTCTAGAATACTAGAATATGTCGAGACTAATGCGTCAAGTAATGTGGAGGTCAAGAACAAATTTAATGCTTTTAGTTTCTCAGATGTTTGCGAACATCTCAAGCTACTCTGGAAGTGGAATTGTTGTAGTCGATATAACTGATGCCCATTTTTGTTCTCCACAAAGAAATTGGATGTTTTCTCTATGTAAAGTCTGTATGTCAGTTCTCTTTCTCATTATATAATGCTACACCAATGTGGAATGGGTTCTTTCTAAACCTGCAGTATATAATTAGGGATCATTTGGTAGAGTGTATAAGAATAATTCTAAATAAGGTGTATTGGTATTACTGATATTGGTTATGCTTGCATTAGTTATGCGGAGCTTATGCAGTGTTTAGTTTGGTGTATTAAAAACAACATTCATTGCATATTTCAAAAAAAGTTTTATTTATTACAAAAATACCTTTATTTTGAAAATTGAGAAATCCGTCGGTTACCCGCCGCCATTTGGACAATGGAAAGGATGTGAAGAGATTTTGAGGGGTAATAGTGTCTTTACCCTTGCTAATGTATGCATCAGATCCCTTGACTCTCTGCACTTGATGCACCTACAACTTGAGCACTATTTTATAAGGGAGCTATGTTTACCTGTTCTGACGTGAATTCTTTGCAACAAATTCATATCCTTACTGAAACTGTGATGTCAATGAACTTTCATTTATACATAGTTCAACTAGTAAAACACGTAGAAGTTAATAAATGTCTAAGCCCTTTACTCTATGTTGCTCACACTCTTCGATAATGTCGACGTGTGCGTGTAAGATCCTCCAAAATAGTGTATTTTTGAAGGATACAACACAGGTGCGACACATTTTTGGAGAGTCCGAGCAACCTAGCTTTTACTGTTTTGAAACATTGTATAATGAATCAATGTGTATGACACAAACTATCGAGATTATTCCCTTTATCAGTCTATCATGAGATCCATACTCGTTTTACGTACATCATGTACATATTGATGAAAATGAATCTAAGATCCATTTTCCAGCTAACACACCCTATATCCAAAATAATATTGCAATATGGGAATTAATGCAAAATTTATGACCACTCCAACAATTAGTTAAAAAGAGGATTATAAAAATTCCTTGCAATTGTGTTTTAGTAAAAGAGGTCTAGAAGTAGAATAAATTGATTTGTTTTGAGTTTGAATTTTAATTTTTTAGTATGAAGTAGATCAAACTATATTCATCAAAGAAGATAAAGGATTTTACATTACACGGTTTCACAAGATGTTAAGGGAAATCTTTTGGTTATTGATCAATAATCATGTTTTTCATTATGTGTTAATGAAATCTTTTGCGTACTAACTAAAAAGAAAACATATTTGTGGAAATGGAGAAGAACTAAAGAGTGTAGATAAAAGTTTCTCTTTTGGAGAAGTGGACAAAGGTTTGGATAAGTGAAAAAAGAAGGGGTTTTATTTTCGGATCAGATGAGTAGAAGATATCTACAAATATTATAGTGTATGAGATTGTTTGTTGTTGTATTGCATTTAACACATAAATATTCATTTTTTGGGTGTTGATTGCCTAGGTTAGACTTAGATTAGTTCAAGTCTAATGACATACATATTTCGGGTGTTGATTACCCTTTTGATCGTTTCTCTTATTCCCAAACCTTACAAATGTCGGCAGGAATGTAAGGGTGAAATGAAGTAATTCCATAAAAAATAGATTATAGAAGAAAATGGCTAGAAGACGATTCACTATTTGGCGCCCTAGATAAATATGCAAAGAATCTTGAAGCCGAAGGTCACAAATCACAATTTAAAACAATGTTATTTGTGTGGTAGAAAAAATTGGAAGAACATAGTAAAAATGGAACCCATGTCCAACAACAATAACATACCCAATGTAGTGTAGTCCCACAAGGTGGGATCAGGGGTTAGGGTATATACAAACTTCACCCATATCTCACACATAGAGAGTTGTTCCCGAAAAGACTCCGACTCAGTAACGCATATCAAAGAACATATAGAAGAAAAGTGTTATAACAAGTACTGGAGGAAAAATCAAATGACATATAGGAAAAGAAATAATAACATAAAAAGGTAGTGCAATAATCAAACAACAAGACACAATTGGTAGTAACATAAATCGTAGAATAAAGAATTACGCCAAAAAGTTAATACTACTAGTATTAAAAGAGAAACAAAACGGGGTGCCAAACTACCACCGAGCGTGATCATAGGAAAGCGAGACAACAATCAACTATCTATTAACCTTTTATCCTAGTCAACAACCTCCAAATCCTTCTATTTAAGGTCATGTTCTCGCTGAGCTGAAAATGCGCCATAACTTGTCTAATTACCTCTCCCAATACTTTTTCAGCCTACCTTTACACTTCCTCGAACCCATTATTACCAACTTTCTGCACGTCTCACTAGGCCTCTCCACATACTTGAATCGTCTCTATCTCACTTCTATTCTTGTCCACCACAGTGGCTACTCCGACCTTCTCCTGGATGTCTTCATTCCTAATTTTATTCTTCCTAGTATGTCCACATATCCACCATCACCGATCTCCCCATTTTCTTGGAATAAAGACCTAAGATACATGAACTTTCTTTCCTGGGGATGACTTGCATACCAAGCTTTACTTACACGATAAGTTCTAGTGTTCCAAGCATCATACTATTTGAATGTCTAGTTTTTATTCAGCATGAACTAAATTAGGAGTAGAACTTGTGAATTATATTAAATATCAATTGCGAGCATGTTGAGTTAATAGTCGTCTTTTACTGTGTGGTTAAATTAGGACAGAAGAAGACAAGAAGTGGAATATAACAATTTGTTAAATTACCTTTATGGAAAGAGGAATGTGTAGTTTGATAGAATGTTGAAGTGAGTAAAAATGTGAAATTTTCACATATGAAGTAAAAAGCATATCGAGTTTGTAGCTCCTTTTTACCCTTTGAAATTTAAGATGGATGAAGGTGGAATTATAATAAATAGTTTAACCTCCCCTTTAAGACATTATAAGTTATGTACTAAATTGAATGCTCAGATTAGTGGCTCTATCATAAAGATTAGAACATTCATTCTCTTTCTTCTATTCTATATTAACAGAAGTCTAGACAATGTCCCATACAAAGAAATAATCATTAACTATTGAAAATATTAATATTGTTTTCATCATACGAATGTCAAATATCTACTAACCATAGGCTTGATATTTGACCATGAATCTTGCCAAAACTATTGGCAGCATATAGTAGAAGTATTTGGTAGCGGATTCACAGGTGCCATTGCAAAAAGCAAATGTAATGAAGAGGTGGAAGTTGGGACATTGATGACTTCACATTTTACATGATAAGTTAGGGAGGGCCTTTCTACTCTATCAAAGCAAAAAGACTCGAGAGACGCTTATAATGCCTGTGAAGAACATGTCTCTACCCTCGATCAGTGATCTTGACATCGAGTTTTGGAATAGAGAAACTGTTGGCAAGGAGTGTTACCCCTTTTTGTGGGCCATATGTGAGGTGATTGGTATTCTCATGCCAATGGGTTTTGCATACTAGATGGTTCGACTATTCCATCGAGTACATGCTATTTCCATTTAGCACAAGTATTGAGTAATTTTGTTTAAGGCTTAAGACATGGGCAGATGTGAAGAAATTACTTATCGTCCTTTGTGTCTGCTACTAGGATTTGAATCCTGATCTTTTATGTTTTTCACCCTTGTTGTACTAAATTCAGCGGAGAAACTTTTGGATCTTTGTGGTAATGTGCCAAAACCCTTCGAAAATATTTCCTAATGTTTTTGTTAAATTAGGTCTTAGGCCTAAATCACACTCCAAAAACTAACTCAAAGGGAGTAGGATTGCCCAAGCCTTATAAGGAGTCCACCCATCTCATTAACCATCAATGTGGGGGGTTTTGTTATTCTTTAACACCCCACCTCACGCCCAGTGCTTTGCATTTGGTGCGTGAGCAATTTGATTTTTTGAGCCCCAACATTGGATGAGACGGGCCCTGCTCTGATACCATGTTAAATTAGGTTTAAGGCCTAACTTACACCCAAAAGCTAGCTCAAAGGGAGGAGGATTGCTCAAGCCTTATAAGGAGTCCACCCATCTCATTAACCACCAATCTGTTCATGACAATTATACTTACTAGGCGACAAAATGGATTTCAACTTTATTGATTGCTAGGCCTCACTTGGGTTAGAGAAGAACATGTCATTTTGAGTGGAATAAAAAATCGACGAGCACGTGATAGCTGATACAATATGTATGCGTTGTTTCCTAAGTTCATTGATAGTATCTATGTTAGTATCAATGAAAACCTTGCTTGATAAGAAGAGTTCATTAATAGTATCTCATAAGCCGGTTTTTGTGTATATTTCTAATAAAGATTTTTTTTGACAAAATATTCCTCATAAAGATTTATTTTCCAATACTAGAATCTTTTGCGGAAGTAAGAGTAGAGAGGAAGGACCTAGGTATTGAATTAGAAGCCTCACAAAGGAGCTCTCGATGAGTTCAATTGGTGAAAAAATTTACTCGATTGTCTCAATCGGCTCATTTTGATACAATTTTCTATATCTAGAAGTGTTCGATCTTTCTTGTATCTTGTATTGGAGATATGAATTGATGCATGTAAATGCAGGTGAAGAAATTTATGAGGAAAGGTGCGTTCTTGTTTCATGAAACCTTATTGGTGACCGTTCTTTACTTTTTGATATACTGCTTGTATACATGAATTTTGGTAACATTTTGATAGAATTATTTACGTTATTTGTCCTGCATCAGTCCCTAAAAATGGTAAAAGCATGTTGATCACTTCTTCTGTGTCAGGTGTTTCTGTGCAAATAGGAACAACTAATAAATAGTGTCATTGATGATTTTGAATCTTGTCATTCTAACCAGTCGAGCAAGAGCATTTATTGTTTTCTATTTTTTGGTTATACATTATGTTATCATTTTCTGGCTGCTTATTGATTCTATTTTTTATGTTATGTGTTTATGTTCTTTTAGTCTCTCTTTCTTTGATCGATTCAATCATGCTTTCCAGGCTTCCTAGGTTTTTTGCTGAAAACCATTTTCTGCTTTGAATCGTTGTTCTGTACCAGGTAAATGGATGCTTGTCGTACTTTGACAAAGTGCCTGATGGATTTTACTTGATCCATGGGATGGATCCATATGTCTGGATTGTCTGCTCAGATCTACAAGAAAATGCCCGGGTTCCATCTATTGAATCAATGAGAGCTGTTGATCCCTCTGTAGTACCATCAGTTGAAGTGATTTTGATTGATCGGCGTACGGATCCAAGCTTGAAAGAACTGCAGAATCGGATCCATAGTCTCTCTCCTACTTGTGGCACAACAAAAGAAGTTGTTGATCAGCTTGCTCAGCTGGTCTGCAGTCATATGGGGTAAGTGCCAGAAACTTCTTTTGACTCCGATAAATTACTTTTTTTGTGTGTGTTTTCTCCTTTTTGTAATTAAGTTTTATTTCTTAGGGGCGCAACTTCTGCCGGAGAAGATGAGTTGGTTCCTTTGTGGAAGGAGTGTAGTTATGAGCTGAAGGATTGTCTAGGATCCACTGTGCTTCCCATTGGTAGCCTGTCTGTTGGCCTTTGCAGGCATCGAGCTTTGCTATTTAAAGTATGTTCTAGATGTGATCTACTGATTTTTAGTTTGCTGTTTTATTCTCAAGATTTACTTACACAGGAATTTATGGATCAGCATCTGATGAATGGCGTTCTTTTAAAAAAAACTAAAGAAAAAACATGTTTTTTGCAAATTGTTGTCTTCTCTCCTCTGTCAGAATAAATGTACGTTCAATCAGGAGTTTCTTAGTTTTGGTGGTACGATGGAACATTGATGTGATATCATGAATTTCACATGATTGTTGCAGGTTCTAGCTGACGCCATTGGTTTACCATGTCGAATTGCCAAAGGATGTAAATATTGTAACAGAGCTGATGCTTCCTCATGTTTAGTTCGTTTTGGACCTGACAGGTGCGAATCCAAATTTTAAATAATCTCGGAGTATATTATCATTTCATCCCCAAACTTGCATATTTGAGGAAAATTATTTTGTTAGCCATGTTTGTTTAAATATATAAAGCAATGATAGATGGAAATTGATGTTCCAACTTCCCTTCTGTTTCAAAAACCATTAATATGTATTTTGTTTGTGATAATCAATTTTTCCTTCCCTACTCATATATTCCTGTGCAGTTAACATGTGCAATTTATATGGACTTTGATCGTGTTGCCTATATCTTACCTCGTATTTAGTGTATAATATGGCCAACTTCTGAATTTCTTAATCTTTCTGGTTTAAGCTTTCTTTGAAATGCATAGAGCTAGTATATCTGTAGAAACTGAACTTAATATATTCATGTCTGGGAGATGAGAATGATGATGTTTTGAATATTTTTGTGTGGTCTTTCTGCATTCATGCTGCAAGAGATCTGTAAAGATCAGTCACTGTATGTAGTTCATGACCTATGTTGGTACTTGGTACTAACTGAAGTTTCTCCTTCGTCCTGATAGCTGCTCCTCTTAGTTCTTTTTGTTGTTGGAAAAGCCATATTTATTTTTGGTTTTTACAATATAACTACTGCAACCTCGGTGCCAAAAAGAACGGTGGCACTTCGAGTAAGTGGCACGCTGCATTCAATATGAATTCAGACATGGTTCTCTGAATGGTTTCTAGAGAAAAATTATACATCTAGAGACTGCATAAGGGTACTACATATGAAATTTTTTTAAATGGCTAACATTGTTTTTATAAAAGATTACATAAAACATCGTAATCAAAGAAAAGGTTGTTTGATTCCTCCAAATAGTAATGCTGCCATTCTTTTTGGATCAAAGGAGGAGTATCTTGGGGTGGTGATAGGAATCTTAATATTTGAAAGAACAGATCCCATTATTAAAGGAATACCTTATACACTTGTAATATAATAGATTCTCAATTTCGTGATTGAATTGCAACGAGATGTCCTCCTTTCTTCTGCTCAGCCCTAAAATGTGGAGGAGAAGAAATTAAATGGGGAAAAGTATAAGCAATTAAAATTAGAGATTGTGTAGCGAACAGCAGGATACTATTTTTCTATGCTACTTTCAAGTTTCAACTAGGATTTAGCCTGAAAAAAAATGGCGGTTCTTGTAAAGAAATGCAAGTGTTAGTTCTTCTTTACACAGTTAGATATATGCGATTTCTATTGATTGTTAAAGAGAACAGAGTCTTGATTTTCGCTCTTCACCATATAGGGAGTACCTGGTTGATTTGATTGGGAGCCCTGGATGCTTATGCGAACCAGATTCCTCGCTCAACGGCCCATCTTCTATCTCAATCTCTTCACCATTGCGATTTCCGAGATTCAGAGAAGTTGAACCGACAACTGATTTCAGGTCACTTGCCAAACAGTATTTCTCGGATTGTCAATCGCTTAATCTTGTGTTTGAGGAATCTTCAGCAGGTTATCCTCTAAATCCTACCTGCTTTCATGAGCAAATACATCTTTGCTGCTTGTTTTGGTTGTTTCCCGGATGTTAAGCTTGGTGTCTGCGATATTGTGATGAGAGATGTTCAGTTCACGCATAATTTTATAATGGCTTCAGACAGATGTTTCTCGGTTCCTAGCCAAGAAGAAATATCCTATTTCCTCGTGTTAAATGTTCCTCTATTTTTTTTCATAAAAAAAAGTTTAAATCTTTTATCTTTGGATCTGAAGGGTTATCCTTGGTTTCTCTAAACATATACTAGAAAAACTCAAACCTTATTAGTATTTATGGTATAAGCATTTCCCTAAAAATTTTGGCTGTACTTATTTGTCCTATTTTTGAAGGGCATTCTTTACAACTGGTTTCCCGACTTTTCACTCCCGGGCTTCCCAATTCCCATTACTAGTTGTACTTAAACAAACCTACAAGCATATTTGCTTTCTCAGAATTCACTCACCATTGTCTCTTCTACATGATGTCACTACTATCTGACTGTAATTAAGCTGGAACCTCACTAACCATAAATTTACTTGTACCTACTAAAAAATAAGTAAAATAATAATGGAGATAACAATACAATTGTTTCTTTTCCCTCCTCCATTTTATAGGTTTTGATTTATGGCGACTTAAGTTTTATTTTTCAGCAAAGTGGAAACCAAGAATCTAAGGTTGTAGAAACTTATAAATATATGCCTCAAATCCCAAGGTAGTTGAGGTCTGCTATATGAAACTCACTGTCCATGTTGCTCCCTTAAAGACCAGTCTTAATTCAATTATTTGGGTTTTCTAACACTAGAAGTTCTCTACATTTTTTACTGGCAAAGAAATCTACGTTGAAGGTGTTCCATATTTTGAGGATACATCGTGAAATGAGAAGTTTTGTAGTGGCTGCTAACTTACTAGAACCCTCCTCATTTATTGGGCTTGAGATTGGCAAAGGCGAAGCAGCTATCTATAATATCTGTCTTTCTTCTCTTTTATTGTTTTATTGTCGTTTTATGTTCTATTCGGGGCAACACAGGTTGTGCTCTCCGAAAACATAATTTCAATTTTCTATTCAATTCAAAATTCAAATTGTAGTATGATACTTTTCTGATATCTGATAATTCTATATCGGGAACATATATAAATAATATATATCCGTCTAACAATTTATCTTGGGGGGTTCACATATACTGATAATTGTTGTTATAATTATTATTAATAATTAAAATTGAGAAGGATTTTTTGATTGCAAATATCCATACTGAACTGATTAGTTATATATTATATATCAAGTTGTATTTTGTTATATCATTAGGATCTTTGCTTTTAGAAAGCCAATTTGACCTCTTGTATGGTAAAAGACACCTCTAGATTACACAAGGTCCACATTTGTGAACCTTTGACACCCAGAGGTTTTCTTGGCTAATTCTCTGGTTTACTGTGATGTTTACCAAAAGGTTTGACTCAAATTAATGAAACTAAGATGTTGAGACATTCGTTTTTTTTAAAAATGACTCAACTAACAGAATATATTTCTCATTCTTTTCTAATGTTATTGTATTTTGTTTTCTTTCACAAACTATACTTCATAATTTACTTAGAGAAGTTGATTAGTAGCTGTCTCCCTACCCTGCAGCTGTGAGCTTTTATGATCCTAGTTGCTGTATTCTTCAGCATTGTGGACATGCTGGACACCATAAAAAATGTTATATTAAAAAATAAAAATAGAAAAGAAGATACTAACACAGATCTTAATAAATCTACAAAATGACCTATATTCTCTAAACCTACTTCTTTACACCAAAAGTAGAAAGATATTATACAATTCCATTTAACTTTTCTTAGTCACGTTTAGCATATCTATCTAGTTGCCTTTCCTCTTCCCATACAAATAAATATTATTATCTTGACAAACTAATTCCCTTGATTGTTTCTTGAATTTTATACCCAAACATGTTCTGTTTCAAGGTTCTTAATTAATATTGTTTGTCACAGGAGCTGCTGTTGATGGAGACGCAGGACAAACTGACCGAAATAACATTGAGAGAAACAGTGCTGTCACTGGTCCAAGTAACCGTGATGAAGTTTCTCGGTTACCTGTGCCTGCAATTAGGTAAAACGGTCTTGACGAAGACTGTCAACTTACTATTTACTAGTGTAGATAGTCCTCAAAATATCTTAAACTCAGTTAACATGGACAGGGACATGGCTCCTGTGAAGTATGTCCGTCCAGTTTTGCATGGAGATACACAATTATCAGACCCAAGAGATATAGGGAATGATATGCGATTTCTTGAGAGAGGAAGTCAACTTGTTCCCTCTAAAATAAGTAGAGACATTGCCCTTGAAATAGAAGATTTTGATATACCCTGGGAAGATCTTGTTCTGAAGGAGAGGATTGGGGCAGGTAATCCCTGCCTGCTATCTTTTGTATCCTCATTTTTAGTCTCGTGCTATGATTGTCTCAGTACATGTTAGTGATATTGGGATGCTAGAGTATCATAGCATCCTCTTCTCATGTACCTAACACTGATTGTTGCATCTCAGGGTCTTTTGGTACTGTTCACCGTGCTGATTGGAATGGTTCTGTAAGACATCTCCTTTTAGTTCTGCATCCTTGATACTCGTTTTTGTTATATCAGTTAACTCATTTAGCACTTCGGAGAAGCATTTATTCAGTGTAATTTTTGTAAATGATTTGGGTGTTTATTTATTTCTATTTTGTTTTTGGCCTGATCCACTTCTCGAATAAATGTTGTTGGTTTATCTGTTGATCTCTCTCTTTTGTTTTCCTTATTTGAGATTATCTTTCTGAATTACCCTGTCTCGTTTGGTTTTATTCCTTCATAATTGCATGCTGATGGAAGTTTCAAATTACTTTAGGATGTTGCTGTGAAGATACTCATGGAACAAGATTTTCATGCAGAGCGATTCAAGGAATTTTTGCGGGAGGTAACTCTCATTTCCCTATCTCCTCAACTATTGATAAGCAAACTGGATAAAAGAGAGAAAATGAGGATGGGTGAATGCCAGTTTTATTGTTTATTTTCCTTAGACCAATTGCACTAATCCGACCTTCCTTCCGTTTTGTTTAGGTTGCAATTATGAAGCGGTTGCGACACCCAAATATTGTGCTTTTTATGGGTGCAGTTACTCAGCGACCAAACTTGTCCATAGTTACAGAATATTTATCAAGGTTTTATCTTGGCAAACCCTACAGTAATCGGACTTTTGATTTTTCAGTCTAGCTAACAGTGCCCATGTTGCAATGTATTTCAGAGGTAGCTTATATAGACTTCTTCATAAACCTGGTGCTAGGGAGGTTTTGGATGAAAGGTGTCGGTTGTCTATGGCATATGATGTGGTATGAATACGTCCCCGCTCTGCCTCATTTTATTTTGAATCTGGGGCTCATCTCCTTATATCATATTGGTGCAGGCAAAGGGGATGAATTATCTACATAAACGCAATCCTCCCATCGTTCATAGAGATTTGAAATCTCCAAATCTTTTAGTGGACAAAAAATACACAGTGAAGGTGAGAATAATTTCCTTTTCAGCACATGTTAAAATTGCAATCCATCTTTTCTCTATTGATACAGTTCTTGACTTGCGCTATCAGAGTCGTTTAAAGGAGAGAAAAATGGAGAGGATGTCTTAGTGTCAAAAACTTGTATACTTATGCATAATTATTGGAGAACAAAAAAGGAAGTTTGGAGGGATAAAGCTTATGTCAGATTTCTCAGATAATGGAGAACTAACGGCGTGTAATGTTGTGGGGAGGATTAAATTGCAACAGACAGCATATATCTTGAAGATTGTACATTATACTTCTGGTTTTGTAGGCCCGTGCGAGTCAGAGGTTTCTTTTGTCATCCGAATGGACATTGACCATCTGGAATCGTGGTAATTCAATGTCCACGTGGCAAGGATGCTGGTATTTGTTTATCTAGCGCCATGTTGATGTACTGGACACCTATCATAACTTCTTTTTTATGTTCTGGATGCAGCATCTCAAGATATTAAAACTCTATGAGGGGGAAGGTTTTTAGTATATTTTAGTTTTACTATTTAGATTAGTGTGAGATACAGGAAACTTCTAGTCCTAGAAAAGCCCTTAATTTGCGTCAACAGACATTATATTGTGTCTACAATGCTTATGCTGACAATACAACGTAAGCTCTGCATCTGATCTGACTCTACTGCATTCTGGAACAAGTCTTAATGAAAGTTGTTTATGATAGATAATTGAGTTCTGTTATGGTGTTTCTCTATGCATATTTTGTGCTCTTATATTATTAAAACCTTCTCTTTATGCAAAGATGTTGAATGTCCCCGGCCTGTCTGATGTCTTCGTCAGGTCTGTGATTTTGGCCTTTCTCGTTTAAAAGCGAACACATTTCTCTCGTCAAAGTCTGCTGCTGGGACTGTAAGTGCCTGATTCAACATATGATTTGTTCAACTTCCGCTCGTCTTTTTCTCTTCACGTCATCGATGCATTTTTTTAACTGGTTCTTCTTGTGAATAGCCGGAATGGATGGCACCTGAAGTTCTTCGTGATGAACCATCAAATGAGAAATCTGATGTATACAGCTTTGGTGTTATTTTGTGGGAGCTGGCAACGTTGCAACAGCCTTGGAGTAATTTGAACCCAGCACAGGTTTGTATTTCTTATCTCTATGCTCTATTGTCCCGGGGGTGGGGGGTGGGGGGGAGAGGGGGAGCCCATTCTTATGTAAATGTAAAATCTGGAGAATGGGCTATGTCTGGAGCCATTCAATTTTGTGTCAGGAGTTGACTAAAGTCTTTGTTTCTGTTTATGTCTGGTAGACTCATACCAGGGGATGGAGAACAATCCGATTTGCTTCAGCAATTCTCTGAAGAGTCATTTATTCCTCATTTTATATACCTCTCTTCTCCATTTGGTTTAGGGAGAGAGCTAGTCATTCATTGGGCATTGAATGTCGATGTCAATGTTATAAAGATTCTTCATGCTTTGATTAGTATTCTCATATCAGCTTCTTTATAGCAAAGATCTTTCTCTGACGAAGATACAGTCAATTAAGAAATGTGGATAAAACGATATCAATCGCATGGAAGATATTTCTATAAGTTCCCTCTTTTGATTTCCGAATTTCTGATATTTCTCTTTGATTAAAAACCAGGGAGGGCACTCAATCTTGTCTTGGTATCTAGGTGGCAACACCTTTATGATACCTCTGATTGAAAACATTGATTTAATACTAGAAAGACAACTTGGATAATTTGCAACACTACTTGGCACTTGTATTGCATCTTGGCTATATTTTAAAACGGAACATATGCATTGTTATCTTTATTGGTATGCTCGTTGTTAAGAGATGAGATAAGAGGGGGTGTGATATCGATTCTTGTGAATTCTGTATTGGTTAAATGCATCTAAACCTGCAGGTTGTAGCAGCTGTGAGCTTTAAGGGGAAAAGACTCGACATTCCACGTGACTTGACTCCTCAAGTGGCAAGCATTATAGAGGCTTGCTGGGCCAAGTATGTTGCTATGTTCTTCCATAGTTCAGTCACATGGGTTTTGGTTTGCTTTGATGTGTACTTCAAGTTACTTTTGGTAATGTTGCAGAGAACCATGGAAACGTCCCTCCTTTGCTGCAATCATGGATATGCTGAGACCACTAATTAAACCTCCTGTAACACCTCCTCAACCAGGCCGTACAGACACGCAGTTGATTGCGTGAATGCGTGTAATAGATGTATGATTTCTGCACATATTTGGCATTCTTTGTTAATCATCTTCTGGGAGGAACAAATCTTTGTTTACTTCAGGTTCGTGTATCCTGAAGTCTCTCTCTTCCTTCTGCTTAAATTTTACATTTGTCTTGATGTACACATGTTACTCCAACTTAAGTCGAAGTTGGAAGTGTTGGTGATTGTTTCGACTTTCTGACTTCAACTTGGCAGATGTGAAGAGGGTTCACCTCTTAGCTTCCTATGCTGTTTCGTTTGATAGTATGTGAGCTTGTAACAACCTTTTTTTTTTATTTACAGGCTTTTGTTCCGTACATATTAGTTCAGAATGCCCGTCTAGAGCCATTTTTTTTCTTCACAAATTCAAGCAGCCATTTCTCCCAGAAGAGCATTTGCAATTGACTTGTACGTTTCCTCGTGGAAATAATGTCTAGCCATATGATTTTGTTAATGTAAGCAAATAACAGTTCTTCTATTTTCTATCAAGAAATGATTTTGTACGTACAAGAATTTATAATGGGAATGCACAGTTCGTATCAC</genome_strand>
        <mrna_strand>AAGCTTATAAACGAATCAAATTAATATACACATACTTTTCTGACATATTTATACATTTAAT---AT-TCCGATGTGCTTTTAAGTCAAGTGCTTACTGTTCTTATGAACTCAAATCAGTCAAAAGTCATAAGCTTATCATCTCTAAGTCGTAATTTTTCAGCTTATAAGCATTTTTGGATTGATCGGAAACGGAAGAAAGTGAGGCCAAATGGGTTGTAAGAGTAATACTTGAAATTATATAGGGAATCATTTGAAATATGATAAAAGTAGAGGGGAGTTTAATATAATTAAGTTAAACTTATAACTTAAAGTCGAAAATTCCAGGAATATTACGACTAAAACAAGACTTCCCCCATCTTTTTTTTCTCTCACTTCTCATTCGACAAGTACGAAGAAGAAGAAGAAAAGAGAGAAAACTTTTAGTGAGAGAAAGTCTTTGAGAGAGAGAGGGAGTTGAAGCTATAGTGTAATGAACAATTTCTAGCTAGGGTTTTGTTGAATTGATAAATTATTGAGATGGAAATGTCTACTAGACGATCGAATTATACTTTGTTGAGTCAAGTTGCAGATGACAATTACCTTCCTCCGCCACCGAAGTACTCCGTCACTGGCGGTGGCGGTGGAGGTGGAGGAGTAGCACCGTATTATGAGTCTCATTCTGGTGAAAAGGGTAAAGGCAAAACAGGTGATAATAGAGGATTTGATTGGGATTTGAGTGATCACCGTAGTAATATGATGCAAGCGTCGAATCGGATCGGTGCGGCGGCATTTCCAGGTTCGATTGGCTTGCAGAGGCAATCAAGTGGGAGCAGCTTTGGTGAAAGTTCGATCTCCGGGGAGTATTACATGCCGTCGTTGTCTAATGCGGAGGCGTCATTTGGATATCTCAATGATGGCGGTGGCGGTGCTGAAGTGAGGATGAAGCCGTTGGAAGCTAATTTGTTCGGTGGCTCGTCTTCTAAGAGCTGGGCGCAGCAGACTGAGGAGAGTTATCAGCTGCAGTTAGCTTTGGCTTTACGGCTTTCTTCCGAAGCTACCTGTGCTGATGATCCAAATTTTTTGGATCATGTGCCTGATGAATCCGCATCCCGTGCTTCAGCTTCAGCTGCTTCGGCGGAGACCCTTTCCCATCGATTCTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAATGGATGCTTGTCGTACTTTGACAAAGTGCCTGATGGATTTTACTTGATCCATGGGATGGATCCATATGTCTGGATTGTCTGCTCAGATCTACAAGAAAATGCCCGGGTTCCATCTATTGAATCAATGAGAGCTGTTGATCCCTCTGTAGTACCATCAGTTGAAGTGATTTTGATTGATCGGCGTACGGATCCAAGCTTGAAAGAACTGCAGAATCGGATCCATAGTCTCTCTCCTACTTGTGGCACAACAAAAGAAGTTGTTGATCAGCTTGCTCAGCTGGTCTGCAGTCATATGGG.......................................................................................GGGCGCAACTTCTGCCGGAGAAGATGAGTTGGTTCCTTTGTGGAAGGAGTGTAGTTATGAGCTGAAGGATTGTCTAGGATCCACTGTGCTTCCCATTGGTAGCCTGTCTGTTGGCCTTTGCAGGCATCGAGCTTTGCTATTTAAA.............................................................................................................................................................................................................................................................GTTCTAGCTGACGCCATTGGTTTACCATGTCGAATTGCCAAAGGATGTAAATATTGTAACAGAGCTGATGCTTCCTCATGTTTAGTTCGTTTTGGACCTGACAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTACCTGGTTGATTTGATTGGGAGCCCTGGATGCTTATGCGAACCAGATTCCTCGCTCAACGGCCCATCTTCTATCTCAATCTCTTCACCATTGCGATTTCCGAGATTCAGAGAAGTTGAACCGACAACTGATTTCAGGTCACTTGCCAAACAGTATTTCTCGGATTGTCAATCGCTTAATCTTGTGTTTGAGGAATCTTCAGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTGCTGTTGATGGAGACGCAGGACAAACTGACCGAAATAACATTGAGAGAAACAGTGCTGTCACTGGTCCAAGTAACCGTGATGAAGTTTCTCGGTTACCTGTGCCTGCAATTAG........................................................................................GGACATGGCTCCTGTGAAGTATGTCCGTCCAGTTTTGCATGGAGATACACAATTATCAGACCCAAGAGATATAGGGAATGATATGCGATTTCTTGAGAGAGGAAGTCAACTTGTTCCCTCTAAAATAAGTAGAGACATTGCCCTTGAAATAGAAGATTTTGATATACCCTGGGAAGATCTTGTTCTGAAGGAGAGGATTGGGGCAG............................................................................................................................................GGTCTTTTGGTACTGTTCACCGTGCTGATTGGAATGGTTCT.......................................................................................................................................................................................................................................................................................................GATGTTGCTGTGAAGATACTCATGGAACAAGATTTTCATGCAGAGCGATTCAAGGAATTTTTGCGGGAG...............................................................................................................................................GTTGCAATTATGAAGCGGTTGCGACACCCAAATATTGTGCTTTTTATGGGTGCAGTTACTCAGCGACCAAACTTGTCCATAGTTACAGAATATTTATCAAG...................................................................................AGGTAGCTTATATAGACTTCTTCATAAACCTGGTGCTAGGGAGGTTTTGGATGAAAGGCGTCGGTTGTCTATGGCATATGATGTG..........................................................................GCAAAGGGGATGAATTATCTACATAAACGCAATCCTCCCATCGTTCATAGAGATTTGAAATCTCCAAATCTTTTAGTGGACAAAAAATACACAGTGAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGTGATTTTGGCCTTTCTCGTTTAAAAGCGAACACATTTCTCTCGTCAAAGTCTGCTGCTGGGACT...................................................................................................CCGGAATGGATGGCACCTGAAGTTCTTCGTGATGAACCATCAAATGAGAAATCTGATGTATACAGCTTTGGTGTTATTTTGTGGGAGCTGGCAACGTTGCAACAGCCTTGGAGTAATTTGAACCCAGCACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTAGCAGCTGTGGGCTTTAAGGGGAAAAGACTCGACATTCCACGTGACTTGACTCCTCAAGTGGCAAGCATTATAGAGGCTTGCTGGGCCAA........................................................................................AGAACCATGGAAACGTCCCTCCTTTGCTGCAATCATGGATATGCTGAGACCACTAATTAAACCTCCTGTAACACCTCCTCAACCAGGCCGTACAGACACGCAGTTGATTGCGTGAATGCGTGTAATAGATGTATGATTTCTGCACATATTTGGCATTCTTTGTTAATCATCTTCTGGGAGGAACAAATCTTTGTTTACTTCAG..............................................................................................................................................................................................................................GCTTTTGTTCCGTACATATTAGTTCAGAATGCCCGTCTAGAGCCATTTTTTTTCTTCACAAATTCAAGCAGCCATTTCTCCCAGAAGAGCATTTGCAATTGACTTGTACGTTTCCTCGTGGAAATAATGTCTAGCCATATGATTTTGTTAATGTAAGCAAATAACAGTTCTTCTATTTTCTATCAAGAAATGATTTTGTACGTACAAGAATTTATAATGGGAATGCACAGTTCGTATCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E745183" ref_strand="+" ref_description="SGN-E745183 [GI|47105945]">
      <seq>gacttctcattcgacaagtacgaagaagaagaagaaaagagagaaaacttttagtgagagaaagtctttgagagagagagggagttgaagctatagtgtaatgaacaatttctagctagggttttgttgaattgataaattattgagatggaaatgtctactagacgatcgaattatactttgttgagtcaagttgcagatgacaattaccttcctccgccaccgaagtactccgtcactggcggtggcggtggaggtggaggagtagcaccgtattatgagtctcattctggtgaaaagggtaaaggcaaaacaggtgataatagaggatttgattgggatttgagtgatcaccgtagtaatatgatgcaagcgtcgaatcggatcggtgcggcggcatttccaggttcgattggcttgcagaggcaatcaagtgggagcagctttggtgaaagttcgatctccggggagtattacatgccgtcgttgtctaatgcggaggcgtcatttggatatctcaatgatggcggtggcggtgctgaagtgaggatgaagccgttggaagctaatttgttcggtggctcgtcttctaagactgggcgcagcagactgaggagagttatcagctgcagttagctttggctttacggctttcttccgaagctacctgtgctgatgatccaaattttttggatcatgtgcctgatgaatccgcatcccgtgcttcagcttcagctgcttcggcggagaccctttcccatcgattctgggtaaatggatgcttgtcgtactttgacaaagtgcctgatggattttacttgatccatgggatggatccatatgtctggattgtctgctcagatctacaagaaaatgcccgggttccatctattgaatcaatgagagctgttgatccctctgtagtaccatcagttgaagtgattttgattgatcggcgtacggatccaagcttgaaagaactgcagaatcggatccatagtctctctcctacttgtggcacaacaaaagaagttgttgatcagcttgctcagctggtctgcagtcatatggggggcgcaacttctgccggagaagatgagttggttcctttgtggaaggagtgtagttatgagctgaaggattgtctaggatccactgtgcttcccattggtagcctgtctgttggcctttgcaggcatcgagctttgctatttaaagttctagctgacgccattggtttaccatgtcgaattgccaaaggatgtaaatattgtaacagagctgatgcttcctcatgtttagttcgttttggacctgacagggagtacctggttgatttgattgggagccctggatgcttatgcgaaccagattcctcgctcaacggcccatcttctatctcaatctcttcaccattgcgatttccgagattcagagaagttgaaccgacaactgatttcaggtcacttgccaaacagtatttctcggattgtcaatcgcttaatcttgtgtttgaggaatcttcagcgggagctgctgttgatggagacgcaggacaaactgaccgaaataacattgagagaaacagtgctgtcactggtccaagtaaccgtgatgaagtttctcggttacctgtgcctgcaattagggacatggctcctgtgaagtatgtccgtccagttttgcatggagatacacaattatcagacccaagagatatagggaatgatatgcgatttcttgagagaggaagtcaacttgttccctctaaaataagtagagacattgcccttgaaatagaagattttgatataccctgggaagatcttgttctgaaggagaggattggggcagggtcttttggtactgttcaccgtgctgattggaatggttctgatgttgctgtgaagatactcatggaacaagattttcatgcagagcgattcaaggaatttttgcgggaggttgcaattatgaagcggttgcgacacccaaatattgtgctttttatgggtgcagttactcagcgaccaaacttgtccatagttacagaatatttatcaagaggtagcttatatagacttcttcataaacctggtgctagggaggttttggatgaaaggtgtcggttgtctatggcatatgatgtggcaaaggggatgaattatctacataaacgcaatcctcccatcgttcatagagatttgaaatctccaaatcttttagtggacaaaaaatacacagtgaaggtctgtgattttggcctttctcgtttaaaagcgaacacatttctctcgtcaaagtctgctgctgggactccggaatggatggcacctgaagttcttcgtgatgaaccatcaaatgagaaatctgatgtatacagctttggtgttattttgtgggagctggcaacgttgcaacagccttggagtaatttgaacccagcacaggttgtagcagctgtgagctttaaggggaaaagactcgacattccacgtgacttgactcctcaagtggcaagcattatagaggcttgctgggccaaagaaccatggaaacgtccctcctttgctgcaatcatggatatgctgagaccactaattaaacctcctgtaacacctcctcaaccaggccgtacagacacgcagttgattgcgtgaatgcgtgtaatagatgtatgatttctgcacatatttggcattctttgttaatcatcttctgggaggaacaaatctttgtttacttcaggcttttgttccgtacatattagttcagaatgcccgtctagagccattttttttcttcacaaattcaagcagccatttctcccagaagagcatttgcaattgacttgtacgtttcctcgtggaaataatgtctagccatatgattttgttaatgtaagcaaataacagttcttctattttctatcaagaaatgattttgtacgtacaagaatttataatgggaatgcacagttcgtagcaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="34216" stop="49995"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34515" g_stop="35285" g_length="771"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="770" r_length="770" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35286" i_stop="41046" i_length="5761">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41047" g_stop="41348" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="771" r_stop="1072" r_length="302" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41349" i_stop="41435" i_length="87">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="41436" g_stop="41580" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="1073" r_stop="1217" r_length="145" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="41581" i_stop="41833" i_length="253">
            <donor d_prob="0.925" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="41834" g_stop="41937" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="1218" r_stop="1321" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="41938" i_stop="43200" i_length="1263">
            <donor d_prob="0.939" d_score="1.00"/>
            <acceptor a_prob="0.678" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="43201" g_stop="43409" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="1322" r_stop="1530" r_length="209" r_score="0.995"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="43410" i_stop="45414" i_length="2005">
            <donor d_prob="0.969" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="45415" g_stop="45532" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="1531" r_stop="1648" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="45533" i_stop="45620" i_length="88">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.805" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="45621" g_stop="45826" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="1649" r_stop="1854" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="45827" i_stop="45966" i_length="140">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="45967" g_stop="46007" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="1855" r_stop="1895" r_length="41" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="46008" i_stop="46302" i_length="295">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="46303" g_stop="46371" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1896" r_stop="1964" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="46372" i_stop="46514" i_length="143">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="46515" g_stop="46615" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="1965" r_stop="2065" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="46616" i_stop="46698" i_length="83">
            <donor d_prob="0.353" d_score="1.00"/>
            <acceptor a_prob="0.415" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="46699" g_stop="46783" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="2066" r_stop="2150" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="46784" i_stop="46857" i_length="74">
            <donor d_prob="0.570" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="46858" g_stop="46956" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="2151" r_stop="2249" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="46957" i_stop="47778" i_length="822">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="47779" g_stop="47847" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="2250" r_stop="2318" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="47848" i_stop="47946" i_length="99">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="47947" g_stop="48078" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="2319" r_stop="2450" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="48079" i_stop="48848" i_length="770">
            <donor d_prob="0.710" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="48849" g_stop="48943" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="2451" r_stop="2545" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="48944" i_stop="49031" i_length="88">
            <donor d_prob="0.955" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="49032" g_stop="49234" g_length="203"/>
          <reference_exon_boundary r_type="cDNA" r_start="2546" r_stop="2748" r_length="203" r_score="1.000"/>
        </exon>
        <intron i_serial="16">
          <gDNA_intron_boundary i_start="49235" i_stop="49456" i_length="222">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="17">
          <gDNA_exon_boundary g_start="49457" g_stop="49691" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="2749" r_stop="2983" r_length="235" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="2987" polyA_stop="3004"/>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E745183" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>2984</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E745183" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34515" e_stop="35285"/>
          <exon e_start="41047" e_stop="41348"/>
          <exon e_start="41436" e_stop="41580"/>
          <exon e_start="41834" e_stop="41937"/>
          <exon e_start="43201" e_stop="43409"/>
          <exon e_start="45415" e_stop="45532"/>
          <exon e_start="45621" e_stop="45826"/>
          <exon e_start="45967" e_stop="46007"/>
          <exon e_start="46303" e_stop="46371"/>
          <exon e_start="46515" e_stop="46615"/>
          <exon e_start="46699" e_stop="46783"/>
          <exon e_start="46858" e_stop="46956"/>
          <exon e_start="47779" e_stop="47847"/>
          <exon e_start="47947" e_stop="48078"/>
          <exon e_start="48849" e_stop="48943"/>
          <exon e_start="49032" e_stop="49234"/>
          <exon e_start="49457" e_stop="49691"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTTCTCATTCGACAAGTACGAAGAAGAAGAAGAAAAGAGAGAAAACTTTTAGTGAGAGAAAGTCTTTGAGAGAGAGAGGGAGTTGAAGCTATAGTGTAATGAACAATTTCTAGCTAGGGTTTTGTTGAATTGATAAATTATTGAGATGGAAATGTCTACTAGACGATCGAATTATACTTTGTTGAGTCAAGTTGCAGATGACAATTACCTTCCTCCGCCACCGAAGTACTCCGTCACTGGCGGTGGCGGTGGAGGTGGAGGAGTAGCACCGTATTATGAGTCTCATTCTGGTGAAAAGGGTAAAGGCAAAACAGGTGATAATAGAGGATTTGATTGGGATTTGAGTGATCACCGTAGTAATATGATGCAAGCGTCGAATCGGATCGGTGCGGCGGCATTTCCAGGTTCGATTGGCTTGCAGAGGCAATCAAGTGGGAGCAGCTTTGGTGAAAGTTCGATCTCCGGGGAGTATTACATGCCGTCGTTGTCTAATGCGGAGGCGTCATTTGGATATCTCAATGATGGCGGTGGCGGTGCTGAAGTGAGGATGAAGCCGTTGGAAGCTAATTTGTTCGGTGGCTCGTCTTCTAAGAGCTGGGCGCAGCAGACTGAGGAGAGTTATCAGCTGCAGTTAGCTTTGGCTTTACGGCTTTCTTCCGAAGCTACCTGTGCTGATGATCCAAATTTTTTGGATCATGTGCCTGATGAATCCGCATCCCGTGCTTCAGCTTCAGCTGCTTCGGCGGAGACCCTTTCCCATCGATTCTGGGTATGGTTGGGTTATTGTTTTGTGTTGATTTTCCTTGTCGTCTATATTTATTTTCTCTGTCAATTGCCTTAATCCAATTATGATTTTAGCTGCAACAGAGGGAAATGTGTTCCTATTATGCTTAAGGTATGTGTTGAATAATTAGCATTGTACACACAAAAAAAATAGCTTGGTTTAGATTACAAATGATTCCAGGCTTTGAATTAGGTAACAGTTTGATGTAAAGGAAATGTTTTCCTTGGATCAACTAGGACTGTTTCGTTGGGTATATGTAGGTGACATAGACTACTTTTAGTCTTGTAGAAGTGGACTATATGGTGTTATGGTAGTGTTTTGGTGATACTTCTGAGTTCTGAGTATTAATAAAGGTTGACAATAATGTAGTAGTGTGGAAAAGTGGGAAAATGACTTCTGTCAAGAAGCAAGGGAAGCCATCTTTTTGTTTGCTGAGAAACTATTTATTGGGTAAGGTGATATTTTCCTGGAAAGTGTTTTCCGTCATACCAAACACAGAATCGACAAATGGATGTGTTCCTTCAAATGTAAGTGCACTGAATCAGTTTTGATAATATTTAAACTACTAGATCCTTTCATAATTTAAAGAAAGATATGTAGCTTCTATATTATTACTGCATCCGGATAGTTCTAGAATACTAGAATATGTCGAGACTAATGCGTCAAGTAATGTGGAGGTCAAGAACAAATTTAATGCTTTTAGTTTCTCAGATGTTTGCGAACATCTCAAGCTACTCTGGAAGTGGAATTGTTGTAGTCGATATAACTGATGCCCATTTTTGTTCTCCACAAAGAAATTGGATGTTTTCTCTATGTAAAGTCTGTATGTCAGTTCTCTTTCTCATTATATAATGCTACACCAATGTGGAATGGGTTCTTTCTAAACCTGCAGTATATAATTAGGGATCATTTGGTAGAGTGTATAAGAATAATTCTAAATAAGGTGTATTGGTATTACTGATATTGGTTATGCTTGCATTAGTTATGCGGAGCTTATGCAGTGTTTAGTTTGGTGTATTAAAAACAACATTCATTGCATATTTCAAAAAAAGTTTTATTTATTACAAAAATACCTTTATTTTGAAAATTGAGAAATCCGTCGGTTACCCGCCGCCATTTGGACAATGGAAAGGATGTGAAGAGATTTTGAGGGGTAATAGTGTCTTTACCCTTGCTAATGTATGCATCAGATCCCTTGACTCTCTGCACTTGATGCACCTACAACTTGAGCACTATTTTATAAGGGAGCTATGTTTACCTGTTCTGACGTGAATTCTTTGCAACAAATTCATATCCTTACTGAAACTGTGATGTCAATGAACTTTCATTTATACATAGTTCAACTAGTAAAACACGTAGAAGTTAATAAATGTCTAAGCCCTTTACTCTATGTTGCTCACACTCTTCGATAATGTCGACGTGTGCGTGTAAGATCCTCCAAAATAGTGTATTTTTGAAGGATACAACACAGGTGCGACACATTTTTGGAGAGTCCGAGCAACCTAGCTTTTACTGTTTTGAAACATTGTATAATGAATCAATGTGTATGACACAAACTATCGAGATTATTCCCTTTATCAGTCTATCATGAGATCCATACTCGTTTTACGTACATCATGTACATATTGATGAAAATGAATCTAAGATCCATTTTCCAGCTAACACACCCTATATCCAAAATAATATTGCAATATGGGAATTAATGCAAAATTTATGACCACTCCAACAATTAGTTAAAAAGAGGATTATAAAAATTCCTTGCAATTGTGTTTTAGTAAAAGAGGTCTAGAAGTAGAATAAATTGATTTGTTTTGAGTTTGAATTTTAATTTTTTAGTATGAAGTAGATCAAACTATATTCATCAAAGAAGATAAAGGATTTTACATTACACGGTTTCACAAGATGTTAAGGGAAATCTTTTGGTTATTGATCAATAATCATGTTTTTCATTATGTGTTAATGAAATCTTTTGCGTACTAACTAAAAAGAAAACATATTTGTGGAAATGGAGAAGAACTAAAGAGTGTAGATAAAAGTTTCTCTTTTGGAGAAGTGGACAAAGGTTTGGATAAGTGAAAAAAGAAGGGGTTTTATTTTCGGATCAGATGAGTAGAAGATATCTACAAATATTATAGTGTATGAGATTGTTTGTTGTTGTATTGCATTTAACACATAAATATTCATTTTTTGGGTGTTGATTGCCTAGGTTAGACTTAGATTAGTTCAAGTCTAATGACATACATATTTCGGGTGTTGATTACCCTTTTGATCGTTTCTCTTATTCCCAAACCTTACAAATGTCGGCAGGAATGTAAGGGTGAAATGAAGTAATTCCATAAAAAATAGATTATAGAAGAAAATGGCTAGAAGACGATTCACTATTTGGCGCCCTAGATAAATATGCAAAGAATCTTGAAGCCGAAGGTCACAAATCACAATTTAAAACAATGTTATTTGTGTGGTAGAAAAAATTGGAAGAACATAGTAAAAATGGAACCCATGTCCAACAACAATAACATACCCAATGTAGTGTAGTCCCACAAGGTGGGATCAGGGGTTAGGGTATATACAAACTTCACCCATATCTCACACATAGAGAGTTGTTCCCGAAAAGACTCCGACTCAGTAACGCATATCAAAGAACATATAGAAGAAAAGTGTTATAACAAGTACTGGAGGAAAAATCAAATGACATATAGGAAAAGAAATAATAACATAAAAAGGTAGTGCAATAATCAAACAACAAGACACAATTGGTAGTAACATAAATCGTAGAATAAAGAATTACGCCAAAAAGTTAATACTACTAGTATTAAAAGAGAAACAAAACGGGGTGCCAAACTACCACCGAGCGTGATCATAGGAAAGCGAGACAACAATCAACTATCTATTAACCTTTTATCCTAGTCAACAACCTCCAAATCCTTCTATTTAAGGTCATGTTCTCGCTGAGCTGAAAATGCGCCATAACTTGTCTAATTACCTCTCCCAATACTTTTTCAGCCTACCTTTACACTTCCTCGAACCCATTATTACCAACTTTCTGCACGTCTCACTAGGCCTCTCCACATACTTGAATCGTCTCTATCTCACTTCTATTCTTGTCCACCACAGTGGCTACTCCGACCTTCTCCTGGATGTCTTCATTCCTAATTTTATTCTTCCTAGTATGTCCACATATCCACCATCACCGATCTCCCCATTTTCTTGGAATAAAGACCTAAGATACATGAACTTTCTTTCCTGGGGATGACTTGCATACCAAGCTTTACTTACACGATAAGTTCTAGTGTTCCAAGCATCATACTATTTGAATGTCTAGTTTTTATTCAGCATGAACTAAATTAGGAGTAGAACTTGTGAATTATATTAAATATCAATTGCGAGCATGTTGAGTTAATAGTCGTCTTTTACTGTGTGGTTAAATTAGGACAGAAGAAGACAAGAAGTGGAATATAACAATTTGTTAAATTACCTTTATGGAAAGAGGAATGTGTAGTTTGATAGAATGTTGAAGTGAGTAAAAATGTGAAATTTTCACATATGAAGTAAAAAGCATATCGAGTTTGTAGCTCCTTTTTACCCTTTGAAATTTAAGATGGATGAAGGTGGAATTATAATAAATAGTTTAACCTCCCCTTTAAGACATTATAAGTTATGTACTAAATTGAATGCTCAGATTAGTGGCTCTATCATAAAGATTAGAACATTCATTCTCTTTCTTCTATTCTATATTAACAGAAGTCTAGACAATGTCCCATACAAAGAAATAATCATTAACTATTGAAAATATTAATATTGTTTTCATCATACGAATGTCAAATATCTACTAACCATAGGCTTGATATTTGACCATGAATCTTGCCAAAACTATTGGCAGCATATAGTAGAAGTATTTGGTAGCGGATTCACAGGTGCCATTGCAAAAAGCAAATGTAATGAAGAGGTGGAAGTTGGGACATTGATGACTTCACATTTTACATGATAAGTTAGGGAGGGCCTTTCTACTCTATCAAAGCAAAAAGACTCGAGAGACGCTTATAATGCCTGTGAAGAACATGTCTCTACCCTCGATCAGTGATCTTGACATCGAGTTTTGGAATAGAGAAACTGTTGGCAAGGAGTGTTACCCCTTTTTGTGGGCCATATGTGAGGTGATTGGTATTCTCATGCCAATGGGTTTTGCATACTAGATGGTTCGACTATTCCATCGAGTACATGCTATTTCCATTTAGCACAAGTATTGAGTAATTTTGTTTAAGGCTTAAGACATGGGCAGATGTGAAGAAATTACTTATCGTCCTTTGTGTCTGCTACTAGGATTTGAATCCTGATCTTTTATGTTTTTCACCCTTGTTGTACTAAATTCAGCGGAGAAACTTTTGGATCTTTGTGGTAATGTGCCAAAACCCTTCGAAAATATTTCCTAATGTTTTTGTTAAATTAGGTCTTAGGCCTAAATCACACTCCAAAAACTAACTCAAAGGGAGTAGGATTGCCCAAGCCTTATAAGGAGTCCACCCATCTCATTAACCATCAATGTGGGGGGTTTTGTTATTCTTTAACACCCCACCTCACGCCCAGTGCTTTGCATTTGGTGCGTGAGCAATTTGATTTTTTGAGCCCCAACATTGGATGAGACGGGCCCTGCTCTGATACCATGTTAAATTAGGTTTAAGGCCTAACTTACACCCAAAAGCTAGCTCAAAGGGAGGAGGATTGCTCAAGCCTTATAAGGAGTCCACCCATCTCATTAACCACCAATCTGTTCATGACAATTATACTTACTAGGCGACAAAATGGATTTCAACTTTATTGATTGCTAGGCCTCACTTGGGTTAGAGAAGAACATGTCATTTTGAGTGGAATAAAAAATCGACGAGCACGTGATAGCTGATACAATATGTATGCGTTGTTTCCTAAGTTCATTGATAGTATCTATGTTAGTATCAATGAAAACCTTGCTTGATAAGAAGAGTTCATTAATAGTATCTCATAAGCCGGTTTTTGTGTATATTTCTAATAAAGATTTTTTTTGACAAAATATTCCTCATAAAGATTTATTTTCCAATACTAGAATCTTTTGCGGAAGTAAGAGTAGAGAGGAAGGACCTAGGTATTGAATTAGAAGCCTCACAAAGGAGCTCTCGATGAGTTCAATTGGTGAAAAAATTTACTCGATTGTCTCAATCGGCTCATTTTGATACAATTTTCTATATCTAGAAGTGTTCGATCTTTCTTGTATCTTGTATTGGAGATATGAATTGATGCATGTAAATGCAGGTGAAGAAATTTATGAGGAAAGGTGCGTTCTTGTTTCATGAAACCTTATTGGTGACCGTTCTTTACTTTTTGATATACTGCTTGTATACATGAATTTTGGTAACATTTTGATAGAATTATTTACGTTATTTGTCCTGCATCAGTCCCTAAAAATGGTAAAAGCATGTTGATCACTTCTTCTGTGTCAGGTGTTTCTGTGCAAATAGGAACAACTAATAAATAGTGTCATTGATGATTTTGAATCTTGTCATTCTAACCAGTCGAGCAAGAGCATTTATTGTTTTCTATTTTTTGGTTATACATTATGTTATCATTTTCTGGCTGCTTATTGATTCTATTTTTTATGTTATGTGTTTATGTTCTTTTAGTCTCTCTTTCTTTGATCGATTCAATCATGCTTTCCAGGCTTCCTAGGTTTTTTGCTGAAAACCATTTTCTGCTTTGAATCGTTGTTCTGTACCAGGTAAATGGATGCTTGTCGTACTTTGACAAAGTGCCTGATGGATTTTACTTGATCCATGGGATGGATCCATATGTCTGGATTGTCTGCTCAGATCTACAAGAAAATGCCCGGGTTCCATCTATTGAATCAATGAGAGCTGTTGATCCCTCTGTAGTACCATCAGTTGAAGTGATTTTGATTGATCGGCGTACGGATCCAAGCTTGAAAGAACTGCAGAATCGGATCCATAGTCTCTCTCCTACTTGTGGCACAACAAAAGAAGTTGTTGATCAGCTTGCTCAGCTGGTCTGCAGTCATATGGGGTAAGTGCCAGAAACTTCTTTTGACTCCGATAAATTACTTTTTTTGTGTGTGTTTTCTCCTTTTTGTAATTAAGTTTTATTTCTTAGGGGCGCAACTTCTGCCGGAGAAGATGAGTTGGTTCCTTTGTGGAAGGAGTGTAGTTATGAGCTGAAGGATTGTCTAGGATCCACTGTGCTTCCCATTGGTAGCCTGTCTGTTGGCCTTTGCAGGCATCGAGCTTTGCTATTTAAAGTATGTTCTAGATGTGATCTACTGATTTTTAGTTTGCTGTTTTATTCTCAAGATTTACTTACACAGGAATTTATGGATCAGCATCTGATGAATGGCGTTCTTTTAAAAAAAACTAAAGAAAAAACATGTTTTTTGCAAATTGTTGTCTTCTCTCCTCTGTCAGAATAAATGTACGTTCAATCAGGAGTTTCTTAGTTTTGGTGGTACGATGGAACATTGATGTGATATCATGAATTTCACATGATTGTTGCAGGTTCTAGCTGACGCCATTGGTTTACCATGTCGAATTGCCAAAGGATGTAAATATTGTAACAGAGCTGATGCTTCCTCATGTTTAGTTCGTTTTGGACCTGACAGGTGCGAATCCAAATTTTAAATAATCTCGGAGTATATTATCATTTCATCCCCAAACTTGCATATTTGAGGAAAATTATTTTGTTAGCCATGTTTGTTTAAATATATAAAGCAATGATAGATGGAAATTGATGTTCCAACTTCCCTTCTGTTTCAAAAACCATTAATATGTATTTTGTTTGTGATAATCAATTTTTCCTTCCCTACTCATATATTCCTGTGCAGTTAACATGTGCAATTTATATGGACTTTGATCGTGTTGCCTATATCTTACCTCGTATTTAGTGTATAATATGGCCAACTTCTGAATTTCTTAATCTTTCTGGTTTAAGCTTTCTTTGAAATGCATAGAGCTAGTATATCTGTAGAAACTGAACTTAATATATTCATGTCTGGGAGATGAGAATGATGATGTTTTGAATATTTTTGTGTGGTCTTTCTGCATTCATGCTGCAAGAGATCTGTAAAGATCAGTCACTGTATGTAGTTCATGACCTATGTTGGTACTTGGTACTAACTGAAGTTTCTCCTTCGTCCTGATAGCTGCTCCTCTTAGTTCTTTTTGTTGTTGGAAAAGCCATATTTATTTTTGGTTTTTACAATATAACTACTGCAACCTCGGTGCCAAAAAGAACGGTGGCACTTCGAGTAAGTGGCACGCTGCATTCAATATGAATTCAGACATGGTTCTCTGAATGGTTTCTAGAGAAAAATTATACATCTAGAGACTGCATAAGGGTACTACATATGAAATTTTTTTAAATGGCTAACATTGTTTTTATAAAAGATTACATAAAACATCGTAATCAAAGAAAAGGTTGTTTGATTCCTCCAAATAGTAATGCTGCCATTCTTTTTGGATCAAAGGAGGAGTATCTTGGGGTGGTGATAGGAATCTTAATATTTGAAAGAACAGATCCCATTATTAAAGGAATACCTTATACACTTGTAATATAATAGATTCTCAATTTCGTGATTGAATTGCAACGAGATGTCCTCCTTTCTTCTGCTCAGCCCTAAAATGTGGAGGAGAAGAAATTAAATGGGGAAAAGTATAAGCAATTAAAATTAGAGATTGTGTAGCGAACAGCAGGATACTATTTTTCTATGCTACTTTCAAGTTTCAACTAGGATTTAGCCTGAAAAAAAATGGCGGTTCTTGTAAAGAAATGCAAGTGTTAGTTCTTCTTTACACAGTTAGATATATGCGATTTCTATTGATTGTTAAAGAGAACAGAGTCTTGATTTTCGCTCTTCACCATATAGGGAGTACCTGGTTGATTTGATTGGGAGCCCTGGATGCTTATGCGAACCAGATTCCTCGCTCAACGGCCCATCTTCTATCTCAATCTCTTCACCATTGCGATTTCCGAGATTCAGAGAAGTTGAACCGACAACTGATTTCAGGTCACTTGCCAAACAGTATTTCTCGGATTGTCAATCGCTTAATCTTGTGTTTGAGGAATCTTCAGCAGGTTATCCTCTAAATCCTACCTGCTTTCATGAGCAAATACATCTTTGCTGCTTGTTTTGGTTGTTTCCCGGATGTTAAGCTTGGTGTCTGCGATATTGTGATGAGAGATGTTCAGTTCACGCATAATTTTATAATGGCTTCAGACAGATGTTTCTCGGTTCCTAGCCAAGAAGAAATATCCTATTTCCTCGTGTTAAATGTTCCTCTATTTTTTTTCATAAAAAAAAGTTTAAATCTTTTATCTTTGGATCTGAAGGGTTATCCTTGGTTTCTCTAAACATATACTAGAAAAACTCAAACCTTATTAGTATTTATGGTATAAGCATTTCCCTAAAAATTTTGGCTGTACTTATTTGTCCTATTTTTGAAGGGCATTCTTTACAACTGGTTTCCCGACTTTTCACTCCCGGGCTTCCCAATTCCCATTACTAGTTGTACTTAAACAAACCTACAAGCATATTTGCTTTCTCAGAATTCACTCACCATTGTCTCTTCTACATGATGTCACTACTATCTGACTGTAATTAAGCTGGAACCTCACTAACCATAAATTTACTTGTACCTACTAAAAAATAAGTAAAATAATAATGGAGATAACAATACAATTGTTTCTTTTCCCTCCTCCATTTTATAGGTTTTGATTTATGGCGACTTAAGTTTTATTTTTCAGCAAAGTGGAAACCAAGAATCTAAGGTTGTAGAAACTTATAAATATATGCCTCAAATCCCAAGGTAGTTGAGGTCTGCTATATGAAACTCACTGTCCATGTTGCTCCCTTAAAGACCAGTCTTAATTCAATTATTTGGGTTTTCTAACACTAGAAGTTCTCTACATTTTTTACTGGCAAAGAAATCTACGTTGAAGGTGTTCCATATTTTGAGGATACATCGTGAAATGAGAAGTTTTGTAGTGGCTGCTAACTTACTAGAACCCTCCTCATTTATTGGGCTTGAGATTGGCAAAGGCGAAGCAGCTATCTATAATATCTGTCTTTCTTCTCTTTTATTGTTTTATTGTCGTTTTATGTTCTATTCGGGGCAACACAGGTTGTGCTCTCCGAAAACATAATTTCAATTTTCTATTCAATTCAAAATTCAAATTGTAGTATGATACTTTTCTGATATCTGATAATTCTATATCGGGAACATATATAAATAATATATATCCGTCTAACAATTTATCTTGGGGGGTTCACATATACTGATAATTGTTGTTATAATTATTATTAATAATTAAAATTGAGAAGGATTTTTTGATTGCAAATATCCATACTGAACTGATTAGTTATATATTATATATCAAGTTGTATTTTGTTATATCATTAGGATCTTTGCTTTTAGAAAGCCAATTTGACCTCTTGTATGGTAAAAGACACCTCTAGATTACACAAGGTCCACATTTGTGAACCTTTGACACCCAGAGGTTTTCTTGGCTAATTCTCTGGTTTACTGTGATGTTTACCAAAAGGTTTGACTCAAATTAATGAAACTAAGATGTTGAGACATTCGTTTTTTTTAAAAATGACTCAACTAACAGAATATATTTCTCATTCTTTTCTAATGTTATTGTATTTTGTTTTCTTTCACAAACTATACTTCATAATTTACTTAGAGAAGTTGATTAGTAGCTGTCTCCCTACCCTGCAGCTGTGAGCTTTTATGATCCTAGTTGCTGTATTCTTCAGCATTGTGGACATGCTGGACACCATAAAAAATGTTATATTAAAAAATAAAAATAGAAAAGAAGATACTAACACAGATCTTAATAAATCTACAAAATGACCTATATTCTCTAAACCTACTTCTTTACACCAAAAGTAGAAAGATATTATACAATTCCATTTAACTTTTCTTAGTCACGTTTAGCATATCTATCTAGTTGCCTTTCCTCTTCCCATACAAATAAATATTATTATCTTGACAAACTAATTCCCTTGATTGTTTCTTGAATTTTATACCCAAACATGTTCTGTTTCAAGGTTCTTAATTAATATTGTTTGTCACAGGAGCTGCTGTTGATGGAGACGCAGGACAAACTGACCGAAATAACATTGAGAGAAACAGTGCTGTCACTGGTCCAAGTAACCGTGATGAAGTTTCTCGGTTACCTGTGCCTGCAATTAGGTAAAACGGTCTTGACGAAGACTGTCAACTTACTATTTACTAGTGTAGATAGTCCTCAAAATATCTTAAACTCAGTTAACATGGACAGGGACATGGCTCCTGTGAAGTATGTCCGTCCAGTTTTGCATGGAGATACACAATTATCAGACCCAAGAGATATAGGGAATGATATGCGATTTCTTGAGAGAGGAAGTCAACTTGTTCCCTCTAAAATAAGTAGAGACATTGCCCTTGAAATAGAAGATTTTGATATACCCTGGGAAGATCTTGTTCTGAAGGAGAGGATTGGGGCAGGTAATCCCTGCCTGCTATCTTTTGTATCCTCATTTTTAGTCTCGTGCTATGATTGTCTCAGTACATGTTAGTGATATTGGGATGCTAGAGTATCATAGCATCCTCTTCTCATGTACCTAACACTGATTGTTGCATCTCAGGGTCTTTTGGTACTGTTCACCGTGCTGATTGGAATGGTTCTGTAAGACATCTCCTTTTAGTTCTGCATCCTTGATACTCGTTTTTGTTATATCAGTTAACTCATTTAGCACTTCGGAGAAGCATTTATTCAGTGTAATTTTTGTAAATGATTTGGGTGTTTATTTATTTCTATTTTGTTTTTGGCCTGATCCACTTCTCGAATAAATGTTGTTGGTTTATCTGTTGATCTCTCTCTTTTGTTTTCCTTATTTGAGATTATCTTTCTGAATTACCCTGTCTCGTTTGGTTTTATTCCTTCATAATTGCATGCTGATGGAAGTTTCAAATTACTTTAGGATGTTGCTGTGAAGATACTCATGGAACAAGATTTTCATGCAGAGCGATTCAAGGAATTTTTGCGGGAGGTAACTCTCATTTCCCTATCTCCTCAACTATTGATAAGCAAACTGGATAAAAGAGAGAAAATGAGGATGGGTGAATGCCAGTTTTATTGTTTATTTTCCTTAGACCAATTGCACTAATCCGACCTTCCTTCCGTTTTGTTTAGGTTGCAATTATGAAGCGGTTGCGACACCCAAATATTGTGCTTTTTATGGGTGCAGTTACTCAGCGACCAAACTTGTCCATAGTTACAGAATATTTATCAAGGTTTTATCTTGGCAAACCCTACAGTAATCGGACTTTTGATTTTTCAGTCTAGCTAACAGTGCCCATGTTGCAATGTATTTCAGAGGTAGCTTATATAGACTTCTTCATAAACCTGGTGCTAGGGAGGTTTTGGATGAAAGGTGTCGGTTGTCTATGGCATATGATGTGGTATGAATACGTCCCCGCTCTGCCTCATTTTATTTTGAATCTGGGGCTCATCTCCTTATATCATATTGGTGCAGGCAAAGGGGATGAATTATCTACATAAACGCAATCCTCCCATCGTTCATAGAGATTTGAAATCTCCAAATCTTTTAGTGGACAAAAAATACACAGTGAAGGTGAGAATAATTTCCTTTTCAGCACATGTTAAAATTGCAATCCATCTTTTCTCTATTGATACAGTTCTTGACTTGCGCTATCAGAGTCGTTTAAAGGAGAGAAAAATGGAGAGGATGTCTTAGTGTCAAAAACTTGTATACTTATGCATAATTATTGGAGAACAAAAAAGGAAGTTTGGAGGGATAAAGCTTATGTCAGATTTCTCAGATAATGGAGAACTAACGGCGTGTAATGTTGTGGGGAGGATTAAATTGCAACAGACAGCATATATCTTGAAGATTGTACATTATACTTCTGGTTTTGTAGGCCCGTGCGAGTCAGAGGTTTCTTTTGTCATCCGAATGGACATTGACCATCTGGAATCGTGGTAATTCAATGTCCACGTGGCAAGGATGCTGGTATTTGTTTATCTAGCGCCATGTTGATGTACTGGACACCTATCATAACTTCTTTTTTATGTTCTGGATGCAGCATCTCAAGATATTAAAACTCTATGAGGGGGAAGGTTTTTAGTATATTTTAGTTTTACTATTTAGATTAGTGTGAGATACAGGAAACTTCTAGTCCTAGAAAAGCCCTTAATTTGCGTCAACAGACATTATATTGTGTCTACAATGCTTATGCTGACAATACAACGTAAGCTCTGCATCTGATCTGACTCTACTGCATTCTGGAACAAGTCTTAATGAAAGTTGTTTATGATAGATAATTGAGTTCTGTTATGGTGTTTCTCTATGCATATTTTGTGCTCTTATATTATTAAAACCTTCTCTTTATGCAAAGATGTTGAATGTCCCCGGCCTGTCTGATGTCTTCGTCAGGTCTGTGATTTTGGCCTTTCTCGTTTAAAAGCGAACACATTTCTCTCGTCAAAGTCTGCTGCTGGGACTGTAAGTGCCTGATTCAACATATGATTTGTTCAACTTCCGCTCGTCTTTTTCTCTTCACGTCATCGATGCATTTTTTTAACTGGTTCTTCTTGTGAATAGCCGGAATGGATGGCACCTGAAGTTCTTCGTGATGAACCATCAAATGAGAAATCTGATGTATACAGCTTTGGTGTTATTTTGTGGGAGCTGGCAACGTTGCAACAGCCTTGGAGTAATTTGAACCCAGCACAGGTTTGTATTTCTTATCTCTATGCTCTATTGTCCCGGGGGTGGGGGGTGGGGGGGAGAGGGGGAGCCCATTCTTATGTAAATGTAAAATCTGGAGAATGGGCTATGTCTGGAGCCATTCAATTTTGTGTCAGGAGTTGACTAAAGTCTTTGTTTCTGTTTATGTCTGGTAGACTCATACCAGGGGATGGAGAACAATCCGATTTGCTTCAGCAATTCTCTGAAGAGTCATTTATTCCTCATTTTATATACCTCTCTTCTCCATTTGGTTTAGGGAGAGAGCTAGTCATTCATTGGGCATTGAATGTCGATGTCAATGTTATAAAGATTCTTCATGCTTTGATTAGTATTCTCATATCAGCTTCTTTATAGCAAAGATCTTTCTCTGACGAAGATACAGTCAATTAAGAAATGTGGATAAAACGATATCAATCGCATGGAAGATATTTCTATAAGTTCCCTCTTTTGATTTCCGAATTTCTGATATTTCTCTTTGATTAAAAACCAGGGAGGGCACTCAATCTTGTCTTGGTATCTAGGTGGCAACACCTTTATGATACCTCTGATTGAAAACATTGATTTAATACTAGAAAGACAACTTGGATAATTTGCAACACTACTTGGCACTTGTATTGCATCTTGGCTATATTTTAAAACGGAACATATGCATTGTTATCTTTATTGGTATGCTCGTTGTTAAGAGATGAGATAAGAGGGGGTGTGATATCGATTCTTGTGAATTCTGTATTGGTTAAATGCATCTAAACCTGCAGGTTGTAGCAGCTGTGAGCTTTAAGGGGAAAAGACTCGACATTCCACGTGACTTGACTCCTCAAGTGGCAAGCATTATAGAGGCTTGCTGGGCCAAGTATGTTGCTATGTTCTTCCATAGTTCAGTCACATGGGTTTTGGTTTGCTTTGATGTGTACTTCAAGTTACTTTTGGTAATGTTGCAGAGAACCATGGAAACGTCCCTCCTTTGCTGCAATCATGGATATGCTGAGACCACTAATTAAACCTCCTGTAACACCTCCTCAACCAGGCCGTACAGACACGCAGTTGATTGCGTGAATGCGTGTAATAGATGTATGATTTCTGCACATATTTGGCATTCTTTGTTAATCATCTTCTGGGAGGAACAAATCTTTGTTTACTTCAGGTTCGTGTATCCTGAAGTCTCTCTCTTCCTTCTGCTTAAATTTTACATTTGTCTTGATGTACACATGTTACTCCAACTTAAGTCGAAGTTGGAAGTGTTGGTGATTGTTTCGACTTTCTGACTTCAACTTGGCAGATGTGAAGAGGGTTCACCTCTTAGCTTCCTATGCTGTTTCGTTTGATAGTATGTGAGCTTGTAACAACCTTTTTTTTTTATTTACAGGCTTTTGTTCCGTACATATTAGTTCAGAATGCCCGTCTAGAGCCATTTTTTTTCTTCACAAATTCAAGCAGCCATTTCTCCCAGAAGAGCATTTGCAATTGACTTGTACGTTTCCTCGTGGAAATAATGTCTAGCCATATGATTTTGTTAATGTAAGCAAATAACAGTTCTTCTATTTTCTATCAAGAAATGATTTTGTACGTACAAGAATTTATAATGGGAATGCACAGTTCGT</genome_strand>
        <mrna_strand>GACTTCTCATTCGACAAGTACGAAGAAGAAGAAGAAAAGAGAGAAAACTTTTAGTGAGAGAAAGTCTTTGAGAGAGAGAGGGAGTTGAAGCTATAGTGTAATGAACAATTTCTAGCTAGGGTTTTGTTGAATTGATAAATTATTGAGATGGAAATGTCTACTAGACGATCGAATTATACTTTGTTGAGTCAAGTTGCAGATGACAATTACCTTCCTCCGCCACCGAAGTACTCCGTCACTGGCGGTGGCGGTGGAGGTGGAGGAGTAGCACCGTATTATGAGTCTCATTCTGGTGAAAAGGGTAAAGGCAAAACAGGTGATAATAGAGGATTTGATTGGGATTTGAGTGATCACCGTAGTAATATGATGCAAGCGTCGAATCGGATCGGTGCGGCGGCATTTCCAGGTTCGATTGGCTTGCAGAGGCAATCAAGTGGGAGCAGCTTTGGTGAAAGTTCGATCTCCGGGGAGTATTACATGCCGTCGTTGTCTAATGCGGAGGCGTCATTTGGATATCTCAATGATGGCGGTGGCGGTGCTGAAGTGAGGATGAAGCCGTTGGAAGCTAATTTGTTCGGTGGCTCGTCTTCTAAGA-CTGGGCGCAGCAGACTGAGGAGAGTTATCAGCTGCAGTTAGCTTTGGCTTTACGGCTTTCTTCCGAAGCTACCTGTGCTGATGATCCAAATTTTTTGGATCATGTGCCTGATGAATCCGCATCCCGTGCTTCAGCTTCAGCTGCTTCGGCGGAGACCCTTTCCCATCGATTCTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAATGGATGCTTGTCGTACTTTGACAAAGTGCCTGATGGATTTTACTTGATCCATGGGATGGATCCATATGTCTGGATTGTCTGCTCAGATCTACAAGAAAATGCCCGGGTTCCATCTATTGAATCAATGAGAGCTGTTGATCCCTCTGTAGTACCATCAGTTGAAGTGATTTTGATTGATCGGCGTACGGATCCAAGCTTGAAAGAACTGCAGAATCGGATCCATAGTCTCTCTCCTACTTGTGGCACAACAAAAGAAGTTGTTGATCAGCTTGCTCAGCTGGTCTGCAGTCATATGGG.......................................................................................GGGCGCAACTTCTGCCGGAGAAGATGAGTTGGTTCCTTTGTGGAAGGAGTGTAGTTATGAGCTGAAGGATTGTCTAGGATCCACTGTGCTTCCCATTGGTAGCCTGTCTGTTGGCCTTTGCAGGCATCGAGCTTTGCTATTTAAA.............................................................................................................................................................................................................................................................GTTCTAGCTGACGCCATTGGTTTACCATGTCGAATTGCCAAAGGATGTAAATATTGTAACAGAGCTGATGCTTCCTCATGTTTAGTTCGTTTTGGACCTGACAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTACCTGGTTGATTTGATTGGGAGCCCTGGATGCTTATGCGAACCAGATTCCTCGCTCAACGGCCCATCTTCTATCTCAATCTCTTCACCATTGCGATTTCCGAGATTCAGAGAAGTTGAACCGACAACTGATTTCAGGTCACTTGCCAAACAGTATTTCTCGGATTGTCAATCGCTTAATCTTGTGTTTGAGGAATCTTCAGCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTGCTGTTGATGGAGACGCAGGACAAACTGACCGAAATAACATTGAGAGAAACAGTGCTGTCACTGGTCCAAGTAACCGTGATGAAGTTTCTCGGTTACCTGTGCCTGCAATTAG........................................................................................GGACATGGCTCCTGTGAAGTATGTCCGTCCAGTTTTGCATGGAGATACACAATTATCAGACCCAAGAGATATAGGGAATGATATGCGATTTCTTGAGAGAGGAAGTCAACTTGTTCCCTCTAAAATAAGTAGAGACATTGCCCTTGAAATAGAAGATTTTGATATACCCTGGGAAGATCTTGTTCTGAAGGAGAGGATTGGGGCAG............................................................................................................................................GGTCTTTTGGTACTGTTCACCGTGCTGATTGGAATGGTTCT.......................................................................................................................................................................................................................................................................................................GATGTTGCTGTGAAGATACTCATGGAACAAGATTTTCATGCAGAGCGATTCAAGGAATTTTTGCGGGAG...............................................................................................................................................GTTGCAATTATGAAGCGGTTGCGACACCCAAATATTGTGCTTTTTATGGGTGCAGTTACTCAGCGACCAAACTTGTCCATAGTTACAGAATATTTATCAAG...................................................................................AGGTAGCTTATATAGACTTCTTCATAAACCTGGTGCTAGGGAGGTTTTGGATGAAAGGTGTCGGTTGTCTATGGCATATGATGTG..........................................................................GCAAAGGGGATGAATTATCTACATAAACGCAATCCTCCCATCGTTCATAGAGATTTGAAATCTCCAAATCTTTTAGTGGACAAAAAATACACAGTGAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGTGATTTTGGCCTTTCTCGTTTAAAAGCGAACACATTTCTCTCGTCAAAGTCTGCTGCTGGGACT...................................................................................................CCGGAATGGATGGCACCTGAAGTTCTTCGTGATGAACCATCAAATGAGAAATCTGATGTATACAGCTTTGGTGTTATTTTGTGGGAGCTGGCAACGTTGCAACAGCCTTGGAGTAATTTGAACCCAGCACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTAGCAGCTGTGAGCTTTAAGGGGAAAAGACTCGACATTCCACGTGACTTGACTCCTCAAGTGGCAAGCATTATAGAGGCTTGCTGGGCCAA........................................................................................AGAACCATGGAAACGTCCCTCCTTTGCTGCAATCATGGATATGCTGAGACCACTAATTAAACCTCCTGTAACACCTCCTCAACCAGGCCGTACAGACACGCAGTTGATTGCGTGAATGCGTGTAATAGATGTATGATTTCTGCACATATTTGGCATTCTTTGTTAATCATCTTCTGGGAGGAACAAATCTTTGTTTACTTCAG..............................................................................................................................................................................................................................GCTTTTGTTCCGTACATATTAGTTCAGAATGCCCGTCTAGAGCCATTTTTTTTCTTCACAAATTCAAGCAGCCATTTCTCCCAGAAGAGCATTTGCAATTGACTTGTACGTTTCCTCGTGGAAATAATGTCTAGCCATATGATTTTGTTAATGTAAGCAAATAACAGTTCTTCTATTTTCTATCAAGAAATGATTTTGTACGTACAAGAATTTATAATGGGAATGCACAGTTCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E708208" ref_strand="+" ref_description="SGN-E708208 [FA35AE10]">
      <seq>cgattgtctaggatccactgtgcttcccattggtagcctgtctgttggcctttgcaggtatcgagctttgctatttaaagttctagctgacgccattggtttaccatgtcgaattgccaaaggatgtaaatattgtaacagagctgatgcttcctcatgtttagttcgttttggacctgacagggagtacctggttgatttgattgggagccctggatgcttatgcgaaccagattcctcgctcaacggcccatcttctatctcaatctcttcaccattgcgatttccgagattcagagaagttgaaccgacaactgatttcaggtcacttgccaaacagtatttctcggattgtcaatcgcttaatcttgtgtttgaggaatcttcagcaggagctgctgttgatggagacgcaggacaaactgaccgaaataacattgagagaaacagtgctgtcactggtccaagtaaccgtgatgaagtttctcggttacctgtgcctgcaattagggacatggctcctgtgaagtatgtccgtccagttttgcatggagatacacaattatcagacccaagagatatagggaatgatatgcgatttcttgagagaggaagtcaacttgttccctctaaaataagtagagacattgcccttgaaatagaagattttgatataccctgggaagatcttgttctgaaggagaggattggggcagggtcttttggtactgttcaccgtgctgattggaatggttctgatgttgctgtgaagatactcatggaacaagattttcatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="41203" stop="46643"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41502" g_stop="41580" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41581" i_stop="41833" i_length="253">
            <donor d_prob="0.925" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41834" g_stop="41937" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="183" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41938" i_stop="43200" i_length="1263">
            <donor d_prob="0.939" d_score="1.00"/>
            <acceptor a_prob="0.678" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="43201" g_stop="43409" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="392" r_length="209" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="43410" i_stop="45414" i_length="2005">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45415" g_stop="45532" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="510" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="45533" i_stop="45620" i_length="88">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.805" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="45621" g_stop="45826" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="511" r_stop="716" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="45827" i_stop="45966" i_length="140">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="45967" g_stop="46007" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="717" r_stop="757" r_length="41" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="46008" i_stop="46302" i_length="295">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="46303" g_stop="46343" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="758" r_stop="798" r_length="41" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E708208" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>798</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E708208" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41502" e_stop="41580"/>
          <exon e_start="41834" e_stop="41937"/>
          <exon e_start="43201" e_stop="43409"/>
          <exon e_start="45415" e_stop="45532"/>
          <exon e_start="45621" e_stop="45826"/>
          <exon e_start="45967" e_stop="46007"/>
          <exon e_start="46303" e_stop="46343"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATTGTCTAGGATCCACTGTGCTTCCCATTGGTAGCCTGTCTGTTGGCCTTTGCAGGCATCGAGCTTTGCTATTTAAAGTATGTTCTAGATGTGATCTACTGATTTTTAGTTTGCTGTTTTATTCTCAAGATTTACTTACACAGGAATTTATGGATCAGCATCTGATGAATGGCGTTCTTTTAAAAAAAACTAAAGAAAAAACATGTTTTTTGCAAATTGTTGTCTTCTCTCCTCTGTCAGAATAAATGTACGTTCAATCAGGAGTTTCTTAGTTTTGGTGGTACGATGGAACATTGATGTGATATCATGAATTTCACATGATTGTTGCAGGTTCTAGCTGACGCCATTGGTTTACCATGTCGAATTGCCAAAGGATGTAAATATTGTAACAGAGCTGATGCTTCCTCATGTTTAGTTCGTTTTGGACCTGACAGGTGCGAATCCAAATTTTAAATAATCTCGGAGTATATTATCATTTCATCCCCAAACTTGCATATTTGAGGAAAATTATTTTGTTAGCCATGTTTGTTTAAATATATAAAGCAATGATAGATGGAAATTGATGTTCCAACTTCCCTTCTGTTTCAAAAACCATTAATATGTATTTTGTTTGTGATAATCAATTTTTCCTTCCCTACTCATATATTCCTGTGCAGTTAACATGTGCAATTTATATGGACTTTGATCGTGTTGCCTATATCTTACCTCGTATTTAGTGTATAATATGGCCAACTTCTGAATTTCTTAATCTTTCTGGTTTAAGCTTTCTTTGAAATGCATAGAGCTAGTATATCTGTAGAAACTGAACTTAATATATTCATGTCTGGGAGATGAGAATGATGATGTTTTGAATATTTTTGTGTGGTCTTTCTGCATTCATGCTGCAAGAGATCTGTAAAGATCAGTCACTGTATGTAGTTCATGACCTATGTTGGTACTTGGTACTAACTGAAGTTTCTCCTTCGTCCTGATAGCTGCTCCTCTTAGTTCTTTTTGTTGTTGGAAAAGCCATATTTATTTTTGGTTTTTACAATATAACTACTGCAACCTCGGTGCCAAAAAGAACGGTGGCACTTCGAGTAAGTGGCACGCTGCATTCAATATGAATTCAGACATGGTTCTCTGAATGGTTTCTAGAGAAAAATTATACATCTAGAGACTGCATAAGGGTACTACATATGAAATTTTTTTAAATGGCTAACATTGTTTTTATAAAAGATTACATAAAACATCGTAATCAAAGAAAAGGTTGTTTGATTCCTCCAAATAGTAATGCTGCCATTCTTTTTGGATCAAAGGAGGAGTATCTTGGGGTGGTGATAGGAATCTTAATATTTGAAAGAACAGATCCCATTATTAAAGGAATACCTTATACACTTGTAATATAATAGATTCTCAATTTCGTGATTGAATTGCAACGAGATGTCCTCCTTTCTTCTGCTCAGCCCTAAAATGTGGAGGAGAAGAAATTAAATGGGGAAAAGTATAAGCAATTAAAATTAGAGATTGTGTAGCGAACAGCAGGATACTATTTTTCTATGCTACTTTCAAGTTTCAACTAGGATTTAGCCTGAAAAAAAATGGCGGTTCTTGTAAAGAAATGCAAGTGTTAGTTCTTCTTTACACAGTTAGATATATGCGATTTCTATTGATTGTTAAAGAGAACAGAGTCTTGATTTTCGCTCTTCACCATATAGGGAGTACCTGGTTGATTTGATTGGGAGCCCTGGATGCTTATGCGAACCAGATTCCTCGCTCAACGGCCCATCTTCTATCTCAATCTCTTCACCATTGCGATTTCCGAGATTCAGAGAAGTTGAACCGACAACTGATTTCAGGTCACTTGCCAAACAGTATTTCTCGGATTGTCAATCGCTTAATCTTGTGTTTGAGGAATCTTCAGCAGGTTATCCTCTAAATCCTACCTGCTTTCATGAGCAAATACATCTTTGCTGCTTGTTTTGGTTGTTTCCCGGATGTTAAGCTTGGTGTCTGCGATATTGTGATGAGAGATGTTCAGTTCACGCATAATTTTATAATGGCTTCAGACAGATGTTTCTCGGTTCCTAGCCAAGAAGAAATATCCTATTTCCTCGTGTTAAATGTTCCTCTATTTTTTTTCATAAAAAAAAGTTTAAATCTTTTATCTTTGGATCTGAAGGGTTATCCTTGGTTTCTCTAAACATATACTAGAAAAACTCAAACCTTATTAGTATTTATGGTATAAGCATTTCCCTAAAAATTTTGGCTGTACTTATTTGTCCTATTTTTGAAGGGCATTCTTTACAACTGGTTTCCCGACTTTTCACTCCCGGGCTTCCCAATTCCCATTACTAGTTGTACTTAAACAAACCTACAAGCATATTTGCTTTCTCAGAATTCACTCACCATTGTCTCTTCTACATGATGTCACTACTATCTGACTGTAATTAAGCTGGAACCTCACTAACCATAAATTTACTTGTACCTACTAAAAAATAAGTAAAATAATAATGGAGATAACAATACAATTGTTTCTTTTCCCTCCTCCATTTTATAGGTTTTGATTTATGGCGACTTAAGTTTTATTTTTCAGCAAAGTGGAAACCAAGAATCTAAGGTTGTAGAAACTTATAAATATATGCCTCAAATCCCAAGGTAGTTGAGGTCTGCTATATGAAACTCACTGTCCATGTTGCTCCCTTAAAGACCAGTCTTAATTCAATTATTTGGGTTTTCTAACACTAGAAGTTCTCTACATTTTTTACTGGCAAAGAAATCTACGTTGAAGGTGTTCCATATTTTGAGGATACATCGTGAAATGAGAAGTTTTGTAGTGGCTGCTAACTTACTAGAACCCTCCTCATTTATTGGGCTTGAGATTGGCAAAGGCGAAGCAGCTATCTATAATATCTGTCTTTCTTCTCTTTTATTGTTTTATTGTCGTTTTATGTTCTATTCGGGGCAACACAGGTTGTGCTCTCCGAAAACATAATTTCAATTTTCTATTCAATTCAAAATTCAAATTGTAGTATGATACTTTTCTGATATCTGATAATTCTATATCGGGAACATATATAAATAATATATATCCGTCTAACAATTTATCTTGGGGGGTTCACATATACTGATAATTGTTGTTATAATTATTATTAATAATTAAAATTGAGAAGGATTTTTTGATTGCAAATATCCATACTGAACTGATTAGTTATATATTATATATCAAGTTGTATTTTGTTATATCATTAGGATCTTTGCTTTTAGAAAGCCAATTTGACCTCTTGTATGGTAAAAGACACCTCTAGATTACACAAGGTCCACATTTGTGAACCTTTGACACCCAGAGGTTTTCTTGGCTAATTCTCTGGTTTACTGTGATGTTTACCAAAAGGTTTGACTCAAATTAATGAAACTAAGATGTTGAGACATTCGTTTTTTTTAAAAATGACTCAACTAACAGAATATATTTCTCATTCTTTTCTAATGTTATTGTATTTTGTTTTCTTTCACAAACTATACTTCATAATTTACTTAGAGAAGTTGATTAGTAGCTGTCTCCCTACCCTGCAGCTGTGAGCTTTTATGATCCTAGTTGCTGTATTCTTCAGCATTGTGGACATGCTGGACACCATAAAAAATGTTATATTAAAAAATAAAAATAGAAAAGAAGATACTAACACAGATCTTAATAAATCTACAAAATGACCTATATTCTCTAAACCTACTTCTTTACACCAAAAGTAGAAAGATATTATACAATTCCATTTAACTTTTCTTAGTCACGTTTAGCATATCTATCTAGTTGCCTTTCCTCTTCCCATACAAATAAATATTATTATCTTGACAAACTAATTCCCTTGATTGTTTCTTGAATTTTATACCCAAACATGTTCTGTTTCAAGGTTCTTAATTAATATTGTTTGTCACAGGAGCTGCTGTTGATGGAGACGCAGGACAAACTGACCGAAATAACATTGAGAGAAACAGTGCTGTCACTGGTCCAAGTAACCGTGATGAAGTTTCTCGGTTACCTGTGCCTGCAATTAGGTAAAACGGTCTTGACGAAGACTGTCAACTTACTATTTACTAGTGTAGATAGTCCTCAAAATATCTTAAACTCAGTTAACATGGACAGGGACATGGCTCCTGTGAAGTATGTCCGTCCAGTTTTGCATGGAGATACACAATTATCAGACCCAAGAGATATAGGGAATGATATGCGATTTCTTGAGAGAGGAAGTCAACTTGTTCCCTCTAAAATAAGTAGAGACATTGCCCTTGAAATAGAAGATTTTGATATACCCTGGGAAGATCTTGTTCTGAAGGAGAGGATTGGGGCAGGTAATCCCTGCCTGCTATCTTTTGTATCCTCATTTTTAGTCTCGTGCTATGATTGTCTCAGTACATGTTAGTGATATTGGGATGCTAGAGTATCATAGCATCCTCTTCTCATGTACCTAACACTGATTGTTGCATCTCAGGGTCTTTTGGTACTGTTCACCGTGCTGATTGGAATGGTTCTGTAAGACATCTCCTTTTAGTTCTGCATCCTTGATACTCGTTTTTGTTATATCAGTTAACTCATTTAGCACTTCGGAGAAGCATTTATTCAGTGTAATTTTTGTAAATGATTTGGGTGTTTATTTATTTCTATTTTGTTTTTGGCCTGATCCACTTCTCGAATAAATGTTGTTGGTTTATCTGTTGATCTCTCTCTTTTGTTTTCCTTATTTGAGATTATCTTTCTGAATTACCCTGTCTCGTTTGGTTTTATTCCTTCATAATTGCATGCTGATGGAAGTTTCAAATTACTTTAGGATGTTGCTGTGAAGATACTCATGGAACAAGATTTTCATGC</genome_strand>
        <mrna_strand>CGATTGTCTAGGATCCACTGTGCTTCCCATTGGTAGCCTGTCTGTTGGCCTTTGCAGGTATCGAGCTTTGCTATTTAAA.............................................................................................................................................................................................................................................................GTTCTAGCTGACGCCATTGGTTTACCATGTCGAATTGCCAAAGGATGTAAATATTGTAACAGAGCTGATGCTTCCTCATGTTTAGTTCGTTTTGGACCTGACAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTACCTGGTTGATTTGATTGGGAGCCCTGGATGCTTATGCGAACCAGATTCCTCGCTCAACGGCCCATCTTCTATCTCAATCTCTTCACCATTGCGATTTCCGAGATTCAGAGAAGTTGAACCGACAACTGATTTCAGGTCACTTGCCAAACAGTATTTCTCGGATTGTCAATCGCTTAATCTTGTGTTTGAGGAATCTTCAGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTGCTGTTGATGGAGACGCAGGACAAACTGACCGAAATAACATTGAGAGAAACAGTGCTGTCACTGGTCCAAGTAACCGTGATGAAGTTTCTCGGTTACCTGTGCCTGCAATTAG........................................................................................GGACATGGCTCCTGTGAAGTATGTCCGTCCAGTTTTGCATGGAGATACACAATTATCAGACCCAAGAGATATAGGGAATGATATGCGATTTCTTGAGAGAGGAAGTCAACTTGTTCCCTCTAAAATAAGTAGAGACATTGCCCTTGAAATAGAAGATTTTGATATACCCTGGGAAGATCTTGTTCTGAAGGAGAGGATTGGGGCAG............................................................................................................................................GGTCTTTTGGTACTGTTCACCGTGCTGATTGGAATGGTTCT.......................................................................................................................................................................................................................................................................................................GATGTTGCTGTGAAGATACTCATGGAACAAGATTTTCATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E573098" ref_strand="+" ref_description="SGN-E573098 [32356]">
      <seq>gtaccgttcaccgtgctgattggaatggtctctgatgttgctgtaaagatactcatggaacaagagttccatgcagagcgattcaaggaatttttgcgggaggttgcaattatgaagcggttgcgacacccaaatattgtgctttttatgggtgcagttactcagcgaccaaacttgtccatagttacagaatatttatcaagaggtagcttatatagacttcttcataaacctggtgctagggaggttttggatgaaaggcgtcggttgtctatggcatatgatgtggcaaaggggatgaattatctacataaacgcaatcctcccatcgttcatagggatttgaaatctccaaatcttttagtggacaaaaaatacacagtgaaggtctgtgattttggtctttctcgtttaaaagcgaatacatttctctcatcaaagtctgctgctgggactccggaatggatggcacctgaagttcttcgtgatgaaccatcaaatgagaaatctgatgtatacagctttggtgttattttgtgggagctggcaacgttgcaacaaccttggagtaatttgaacccagcacaggttgtagcagctgtgggctttaaggggaaaagactcgacattccacgtgacttgactccacaagtggcaagcattattgaggcctgctgggccaaagaaccatggaaacgtccctcctttgctgcaatcatggatatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="45676" stop="49374"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45976" g_stop="46007" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="33" r_length="33" r_score="0.906"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46008" i_stop="46302" i_length="295">
            <donor d_prob="0.997" d_score="0.00"/>
            <acceptor a_prob="0.992" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46303" g_stop="46371" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="34" r_stop="102" r_length="69" r_score="0.957"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46372" i_stop="46514" i_length="143">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46515" g_stop="46615" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="203" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="46616" i_stop="46698" i_length="83">
            <donor d_prob="0.353" d_score="1.00"/>
            <acceptor a_prob="0.415" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="46699" g_stop="46783" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="204" r_stop="288" r_length="85" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="46784" i_stop="46857" i_length="74">
            <donor d_prob="0.570" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="46858" g_stop="46956" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="387" r_length="99" r_score="0.990"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="46957" i_stop="47778" i_length="822">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="47779" g_stop="47847" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="388" r_stop="456" r_length="69" r_score="0.957"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="47848" i_stop="47946" i_length="99">
            <donor d_prob="0.977" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="47947" g_stop="48078" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="588" r_length="132" r_score="0.992"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="48079" i_stop="48848" i_length="770">
            <donor d_prob="0.710" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="48849" g_stop="48943" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="589" r_stop="683" r_length="95" r_score="0.958"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="48944" i_stop="49031" i_length="88">
            <donor d_prob="0.955" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="49032" g_stop="49074" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="684" r_stop="726" r_length="43" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E573098" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>725</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E573098" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45976" e_stop="46007"/>
          <exon e_start="46303" e_stop="46371"/>
          <exon e_start="46515" e_stop="46615"/>
          <exon e_start="46699" e_stop="46783"/>
          <exon e_start="46858" e_stop="46956"/>
          <exon e_start="47779" e_stop="47847"/>
          <exon e_start="47947" e_stop="48078"/>
          <exon e_start="48849" e_stop="48943"/>
          <exon e_start="49032" e_stop="49074"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTACTGTTCACCGTGCTGATTGGAATGGT-TCTGTAAGACATCTCCTTTTAGTTCTGCATCCTTGATACTCGTTTTTGTTATATCAGTTAACTCATTTAGCACTTCGGAGAAGCATTTATTCAGTGTAATTTTTGTAAATGATTTGGGTGTTTATTTATTTCTATTTTGTTTTTGGCCTGATCCACTTCTCGAATAAATGTTGTTGGTTTATCTGTTGATCTCTCTCTTTTGTTTTCCTTATTTGAGATTATCTTTCTGAATTACCCTGTCTCGTTTGGTTTTATTCCTTCATAATTGCATGCTGATGGAAGTTTCAAATTACTTTAGGATGTTGCTGTGAAGATACTCATGGAACAAGATTTTCATGCAGAGCGATTCAAGGAATTTTTGCGGGAGGTAACTCTCATTTCCCTATCTCCTCAACTATTGATAAGCAAACTGGATAAAAGAGAGAAAATGAGGATGGGTGAATGCCAGTTTTATTGTTTATTTTCCTTAGACCAATTGCACTAATCCGACCTTCCTTCCGTTTTGTTTAGGTTGCAATTATGAAGCGGTTGCGACACCCAAATATTGTGCTTTTTATGGGTGCAGTTACTCAGCGACCAAACTTGTCCATAGTTACAGAATATTTATCAAGGTTTTATCTTGGCAAACCCTACAGTAATCGGACTTTTGATTTTTCAGTCTAGCTAACAGTGCCCATGTTGCAATGTATTTCAGAGGTAGCTTATATAGACTTCTTCATAAACCTGGTGCTAGGGAGGTTTTGGATGAAAGGTGTCGGTTGTCTATGGCATATGATGTGGTATGAATACGTCCCCGCTCTGCCTCATTTTATTTTGAATCTGGGGCTCATCTCCTTATATCATATTGGTGCAGGCAAAGGGGATGAATTATCTACATAAACGCAATCCTCCCATCGTTCATAGAGATTTGAAATCTCCAAATCTTTTAGTGGACAAAAAATACACAGTGAAGGTGAGAATAATTTCCTTTTCAGCACATGTTAAAATTGCAATCCATCTTTTCTCTATTGATACAGTTCTTGACTTGCGCTATCAGAGTCGTTTAAAGGAGAGAAAAATGGAGAGGATGTCTTAGTGTCAAAAACTTGTATACTTATGCATAATTATTGGAGAACAAAAAAGGAAGTTTGGAGGGATAAAGCTTATGTCAGATTTCTCAGATAATGGAGAACTAACGGCGTGTAATGTTGTGGGGAGGATTAAATTGCAACAGACAGCATATATCTTGAAGATTGTACATTATACTTCTGGTTTTGTAGGCCCGTGCGAGTCAGAGGTTTCTTTTGTCATCCGAATGGACATTGACCATCTGGAATCGTGGTAATTCAATGTCCACGTGGCAAGGATGCTGGTATTTGTTTATCTAGCGCCATGTTGATGTACTGGACACCTATCATAACTTCTTTTTTATGTTCTGGATGCAGCATCTCAAGATATTAAAACTCTATGAGGGGGAAGGTTTTTAGTATATTTTAGTTTTACTATTTAGATTAGTGTGAGATACAGGAAACTTCTAGTCCTAGAAAAGCCCTTAATTTGCGTCAACAGACATTATATTGTGTCTACAATGCTTATGCTGACAATACAACGTAAGCTCTGCATCTGATCTGACTCTACTGCATTCTGGAACAAGTCTTAATGAAAGTTGTTTATGATAGATAATTGAGTTCTGTTATGGTGTTTCTCTATGCATATTTTGTGCTCTTATATTATTAAAACCTTCTCTTTATGCAAAGATGTTGAATGTCCCCGGCCTGTCTGATGTCTTCGTCAGGTCTGTGATTTTGGCCTTTCTCGTTTAAAAGCGAACACATTTCTCTCGTCAAAGTCTGCTGCTGGGACTGTAAGTGCCTGATTCAACATATGATTTGTTCAACTTCCGCTCGTCTTTTTCTCTTCACGTCATCGATGCATTTTTTTAACTGGTTCTTCTTGTGAATAGCCGGAATGGATGGCACCTGAAGTTCTTCGTGATGAACCATCAAATGAGAAATCTGATGTATACAGCTTTGGTGTTATTTTGTGGGAGCTGGCAACGTTGCAACAGCCTTGGAGTAATTTGAACCCAGCACAGGTTTGTATTTCTTATCTCTATGCTCTATTGTCCCGGGGGTGGGGGGTGGGGGGGAGAGGGGGAGCCCATTCTTATGTAAATGTAAAATCTGGAGAATGGGCTATGTCTGGAGCCATTCAATTTTGTGTCAGGAGTTGACTAAAGTCTTTGTTTCTGTTTATGTCTGGTAGACTCATACCAGGGGATGGAGAACAATCCGATTTGCTTCAGCAATTCTCTGAAGAGTCATTTATTCCTCATTTTATATACCTCTCTTCTCCATTTGGTTTAGGGAGAGAGCTAGTCATTCATTGGGCATTGAATGTCGATGTCAATGTTATAAAGATTCTTCATGCTTTGATTAGTATTCTCATATCAGCTTCTTTATAGCAAAGATCTTTCTCTGACGAAGATACAGTCAATTAAGAAATGTGGATAAAACGATATCAATCGCATGGAAGATATTTCTATAAGTTCCCTCTTTTGATTTCCGAATTTCTGATATTTCTCTTTGATTAAAAACCAGGGAGGGCACTCAATCTTGTCTTGGTATCTAGGTGGCAACACCTTTATGATACCTCTGATTGAAAACATTGATTTAATACTAGAAAGACAACTTGGATAATTTGCAACACTACTTGGCACTTGTATTGCATCTTGGCTATATTTTAAAACGGAACATATGCATTGTTATCTTTATTGGTATGCTCGTTGTTAAGAGATGAGATAAGAGGGGGTGTGATATCGATTCTTGTGAATTCTGTATTGGTTAAATGCATCTAAACCTGCAGGTTGTAGCAGCTGTGAGCTTTAAGGGGAAAAGACTCGACATTCCACGTGACTTGACTCCTCAAGTGGCAAGCATTATAGAGGCTTGCTGGGCCAAGTATGTTGCTATGTTCTTCCATAGTTCAGTCACATGGGTTTTGGTTTGCTTTGATGTGTACTTCAAGTTACTTTTGGTAATGTTGCAGAGAACCATGGAAACGTCCCTCCTTTGCTGCAATCATGGATATG</genome_strand>
        <mrna_strand>GTACCGTTCACCGTGCTGATTGGAATGGTCTCT.......................................................................................................................................................................................................................................................................................................GATGTTGCTGTAAAGATACTCATGGAACAAGAGTTCCATGCAGAGCGATTCAAGGAATTTTTGCGGGAG...............................................................................................................................................GTTGCAATTATGAAGCGGTTGCGACACCCAAATATTGTGCTTTTTATGGGTGCAGTTACTCAGCGACCAAACTTGTCCATAGTTACAGAATATTTATCAAG...................................................................................AGGTAGCTTATATAGACTTCTTCATAAACCTGGTGCTAGGGAGGTTTTGGATGAAAGGCGTCGGTTGTCTATGGCATATGATGTG..........................................................................GCAAAGGGGATGAATTATCTACATAAACGCAATCCTCCCATCGTTCATAGGGATTTGAAATCTCCAAATCTTTTAGTGGACAAAAAATACACAGTGAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGTGATTTTGGTCTTTCTCGTTTAAAAGCGAATACATTTCTCTCATCAAAGTCTGCTGCTGGGACT...................................................................................................CCGGAATGGATGGCACCTGAAGTTCTTCGTGATGAACCATCAAATGAGAAATCTGATGTATACAGCTTTGGTGTTATTTTGTGGGAGCTGGCAACGTTGCAACAACCTTGGAGTAATTTGAACCCAGCACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTAGCAGCTGTGGGCTTTAAGGGGAAAAGACTCGACATTCCACGTGACTTGACTCCACAAGTGGCAAGCATTATTGAGGCCTGCTGGGCCAA........................................................................................AGAACCATGGAAACGTCCCTCCTTTGCTGCAATCATGGATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E435537" ref_strand="+" ref_description="SGN-E435537 [STM-61-P19]">
      <seq>aatatttatcaagaggtagcttatatagacttcttcataaacctggtgctagggaggttttggatgaaaggcgtcggttgtctatggcatatgatgtggcaaaggggatgaattatctacataaacgcaatcctcccatcgttcatagagatttgaaatctccaaatcttttagtggacaaaaaatacacagtgaaggtctgtgattttggtctttctcgtttaaaagcgaatacatttctctcatcaaagtctgctgctgggactccggaatggatggcacctgaagttcttcgtgatgaaccatcaaatgagaaatctgatgtatacagctttggtgttattttgtgggagctggcaacattgcaacaaccttggagtaatttgaacccagcacaggttgtagcagctgtgggctttaaggggaaaagactcgacattccacgtgacttgactcctcaagtggcaagcattattgaggcctgctgggccaaagaaccatggaaacgtccctcctttgctgcaatcatggatatgctgagaccactaattaaacctcctgtaacacctcctcaaccaggccgtacagacacgcagttgcttgcgtgaatgcgtgtaatagatgtatgatttctgcacatatttggcattctttgttaatcgtcttctgggaagaacaaaatctttgtttacttcaggcttttgttccgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="46387" stop="49769"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46603" g_stop="46615" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="13" r_length="13" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46616" i_stop="46698" i_length="83">
            <donor d_prob="0.353" d_score="0.00"/>
            <acceptor a_prob="0.415" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46699" g_stop="46783" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="98" r_length="85" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46784" i_stop="46857" i_length="74">
            <donor d_prob="0.570" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46858" g_stop="46956" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="197" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="46957" i_stop="47778" i_length="822">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="47779" g_stop="47847" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="266" r_length="69" r_score="0.957"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="47848" i_stop="47946" i_length="99">
            <donor d_prob="0.977" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="47947" g_stop="48078" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="398" r_length="132" r_score="0.985"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="48079" i_stop="48848" i_length="770">
            <donor d_prob="0.710" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="48849" g_stop="48943" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="399" r_stop="493" r_length="95" r_score="0.968"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="48944" i_stop="49031" i_length="88">
            <donor d_prob="0.955" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="49032" g_stop="49234" g_length="203"/>
          <reference_exon_boundary r_type="cDNA" r_start="494" r_stop="697" r_length="204" r_score="0.975"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="49235" i_stop="49456" i_length="222">
            <donor d_prob="0.994" d_score="0.92"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="49457" g_stop="49469" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="698" r_stop="710" r_length="13" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E435537" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>709</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E435537" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46603" e_stop="46615"/>
          <exon e_start="46699" e_stop="46783"/>
          <exon e_start="46858" e_stop="46956"/>
          <exon e_start="47779" e_stop="47847"/>
          <exon e_start="47947" e_stop="48078"/>
          <exon e_start="48849" e_stop="48943"/>
          <exon e_start="49032" e_stop="49234"/>
          <exon e_start="49457" e_stop="49469"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATATTTATCAAGGTTTTATCTTGGCAAACCCTACAGTAATCGGACTTTTGATTTTTCAGTCTAGCTAACAGTGCCCATGTTGCAATGTATTTCAGAGGTAGCTTATATAGACTTCTTCATAAACCTGGTGCTAGGGAGGTTTTGGATGAAAGGTGTCGGTTGTCTATGGCATATGATGTGGTATGAATACGTCCCCGCTCTGCCTCATTTTATTTTGAATCTGGGGCTCATCTCCTTATATCATATTGGTGCAGGCAAAGGGGATGAATTATCTACATAAACGCAATCCTCCCATCGTTCATAGAGATTTGAAATCTCCAAATCTTTTAGTGGACAAAAAATACACAGTGAAGGTGAGAATAATTTCCTTTTCAGCACATGTTAAAATTGCAATCCATCTTTTCTCTATTGATACAGTTCTTGACTTGCGCTATCAGAGTCGTTTAAAGGAGAGAAAAATGGAGAGGATGTCTTAGTGTCAAAAACTTGTATACTTATGCATAATTATTGGAGAACAAAAAAGGAAGTTTGGAGGGATAAAGCTTATGTCAGATTTCTCAGATAATGGAGAACTAACGGCGTGTAATGTTGTGGGGAGGATTAAATTGCAACAGACAGCATATATCTTGAAGATTGTACATTATACTTCTGGTTTTGTAGGCCCGTGCGAGTCAGAGGTTTCTTTTGTCATCCGAATGGACATTGACCATCTGGAATCGTGGTAATTCAATGTCCACGTGGCAAGGATGCTGGTATTTGTTTATCTAGCGCCATGTTGATGTACTGGACACCTATCATAACTTCTTTTTTATGTTCTGGATGCAGCATCTCAAGATATTAAAACTCTATGAGGGGGAAGGTTTTTAGTATATTTTAGTTTTACTATTTAGATTAGTGTGAGATACAGGAAACTTCTAGTCCTAGAAAAGCCCTTAATTTGCGTCAACAGACATTATATTGTGTCTACAATGCTTATGCTGACAATACAACGTAAGCTCTGCATCTGATCTGACTCTACTGCATTCTGGAACAAGTCTTAATGAAAGTTGTTTATGATAGATAATTGAGTTCTGTTATGGTGTTTCTCTATGCATATTTTGTGCTCTTATATTATTAAAACCTTCTCTTTATGCAAAGATGTTGAATGTCCCCGGCCTGTCTGATGTCTTCGTCAGGTCTGTGATTTTGGCCTTTCTCGTTTAAAAGCGAACACATTTCTCTCGTCAAAGTCTGCTGCTGGGACTGTAAGTGCCTGATTCAACATATGATTTGTTCAACTTCCGCTCGTCTTTTTCTCTTCACGTCATCGATGCATTTTTTTAACTGGTTCTTCTTGTGAATAGCCGGAATGGATGGCACCTGAAGTTCTTCGTGATGAACCATCAAATGAGAAATCTGATGTATACAGCTTTGGTGTTATTTTGTGGGAGCTGGCAACGTTGCAACAGCCTTGGAGTAATTTGAACCCAGCACAGGTTTGTATTTCTTATCTCTATGCTCTATTGTCCCGGGGGTGGGGGGTGGGGGGGAGAGGGGGAGCCCATTCTTATGTAAATGTAAAATCTGGAGAATGGGCTATGTCTGGAGCCATTCAATTTTGTGTCAGGAGTTGACTAAAGTCTTTGTTTCTGTTTATGTCTGGTAGACTCATACCAGGGGATGGAGAACAATCCGATTTGCTTCAGCAATTCTCTGAAGAGTCATTTATTCCTCATTTTATATACCTCTCTTCTCCATTTGGTTTAGGGAGAGAGCTAGTCATTCATTGGGCATTGAATGTCGATGTCAATGTTATAAAGATTCTTCATGCTTTGATTAGTATTCTCATATCAGCTTCTTTATAGCAAAGATCTTTCTCTGACGAAGATACAGTCAATTAAGAAATGTGGATAAAACGATATCAATCGCATGGAAGATATTTCTATAAGTTCCCTCTTTTGATTTCCGAATTTCTGATATTTCTCTTTGATTAAAAACCAGGGAGGGCACTCAATCTTGTCTTGGTATCTAGGTGGCAACACCTTTATGATACCTCTGATTGAAAACATTGATTTAATACTAGAAAGACAACTTGGATAATTTGCAACACTACTTGGCACTTGTATTGCATCTTGGCTATATTTTAAAACGGAACATATGCATTGTTATCTTTATTGGTATGCTCGTTGTTAAGAGATGAGATAAGAGGGGGTGTGATATCGATTCTTGTGAATTCTGTATTGGTTAAATGCATCTAAACCTGCAGGTTGTAGCAGCTGTGAGCTTTAAGGGGAAAAGACTCGACATTCCACGTGACTTGACTCCTCAAGTGGCAAGCATTATAGAGGCTTGCTGGGCCAAGTATGTTGCTATGTTCTTCCATAGTTCAGTCACATGGGTTTTGGTTTGCTTTGATGTGTACTTCAAGTTACTTTTGGTAATGTTGCAGAGAACCATGGAAACGTCCCTCCTTTGCTGCAATCATGGATATGCTGAGACCACTAATTAAACCTCCTGTAACACCTCCTCAACCAGGCCGTACAGACACGCAGTTGATTGCGTGAATGCGTGTAATAGATGTATGATTTCTGCACATATTTGGCATTCTTTGTTAATCATCTTCTGGGAGGAAC-AAATCTTTGTTTACTTCAGGTTCGTGTATCCTGAAGTCTCTCTCTTCCTTCTGCTTAAATTTTACATTTGTCTTGATGTACACATGTTACTCCAACTTAAGTCGAAGTTGGAAGTGTTGGTGATTGTTTCGACTTTCTGACTTCAACTTGGCAGATGTGAAGAGGGTTCACCTCTTAGCTTCCTATGCTGTTTCGTTTGATAGTATGTGAGCTTGTAACAACCTTTTTTTTTTATTTACAGGCTTTTGTTCCGT</genome_strand>
        <mrna_strand>AATATTTATCAAG...................................................................................AGGTAGCTTATATAGACTTCTTCATAAACCTGGTGCTAGGGAGGTTTTGGATGAAAGGCGTCGGTTGTCTATGGCATATGATGTG..........................................................................GCAAAGGGGATGAATTATCTACATAAACGCAATCCTCCCATCGTTCATAGAGATTTGAAATCTCCAAATCTTTTAGTGGACAAAAAATACACAGTGAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGTGATTTTGGTCTTTCTCGTTTAAAAGCGAATACATTTCTCTCATCAAAGTCTGCTGCTGGGACT...................................................................................................CCGGAATGGATGGCACCTGAAGTTCTTCGTGATGAACCATCAAATGAGAAATCTGATGTATACAGCTTTGGTGTTATTTTGTGGGAGCTGGCAACATTGCAACAACCTTGGAGTAATTTGAACCCAGCACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTAGCAGCTGTGGGCTTTAAGGGGAAAAGACTCGACATTCCACGTGACTTGACTCCTCAAGTGGCAAGCATTATTGAGGCCTGCTGGGCCAA........................................................................................AGAACCATGGAAACGTCCCTCCTTTGCTGCAATCATGGATATGCTGAGACCACTAATTAAACCTCCTGTAACACCTCCTCAACCAGGCCGTACAGACACGCAGTTGCTTGCGTGAATGCGTGTAATAGATGTATGATTTCTGCACATATTTGGCATTCTTTGTTAATCGTCTTCTGGGAAGAACAAAATCTTTGTTTACTTCAG..............................................................................................................................................................................................................................GCTTTTGTTCCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E466446" ref_strand="+" ref_description="SGN-E466446 [cPRO-24-D3]">
      <seq>aatatttatcaagaggtagcttatatagacttcttcataaacctggtgctagggaggttttggatgaaaggcgtcggttgtctatggcatatgatgtggcaaaggggatgaattatctacataaacgcaatcctcccatcgttcatagagatttgaaatctccaaatcttttagtggacaaaaaatacacagtgaaggtctgtgattttggtctttctcgtttaaaagcgaatacatttctctcatcaaagtctgctgctgggactccggaatggatggcacctgaagttcttcgtgatgaaccatcaaatgagaaatctgatgtatacagctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="46387" stop="48314"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46603" g_stop="46615" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="13" r_length="13" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46616" i_stop="46698" i_length="83">
            <donor d_prob="0.353" d_score="0.00"/>
            <acceptor a_prob="0.415" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46699" g_stop="46783" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="98" r_length="85" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46784" i_stop="46857" i_length="74">
            <donor d_prob="0.570" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46858" g_stop="46956" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="197" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="46957" i_stop="47778" i_length="822">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="47779" g_stop="47847" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="266" r_length="69" r_score="0.957"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="47848" i_stop="47946" i_length="99">
            <donor d_prob="0.977" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="47947" g_stop="48014" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="334" r_length="68" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E466446" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>334</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E466446" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46603" e_stop="46615"/>
          <exon e_start="46699" e_stop="46783"/>
          <exon e_start="46858" e_stop="46956"/>
          <exon e_start="47779" e_stop="47847"/>
          <exon e_start="47947" e_stop="48014"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATATTTATCAAGGTTTTATCTTGGCAAACCCTACAGTAATCGGACTTTTGATTTTTCAGTCTAGCTAACAGTGCCCATGTTGCAATGTATTTCAGAGGTAGCTTATATAGACTTCTTCATAAACCTGGTGCTAGGGAGGTTTTGGATGAAAGGTGTCGGTTGTCTATGGCATATGATGTGGTATGAATACGTCCCCGCTCTGCCTCATTTTATTTTGAATCTGGGGCTCATCTCCTTATATCATATTGGTGCAGGCAAAGGGGATGAATTATCTACATAAACGCAATCCTCCCATCGTTCATAGAGATTTGAAATCTCCAAATCTTTTAGTGGACAAAAAATACACAGTGAAGGTGAGAATAATTTCCTTTTCAGCACATGTTAAAATTGCAATCCATCTTTTCTCTATTGATACAGTTCTTGACTTGCGCTATCAGAGTCGTTTAAAGGAGAGAAAAATGGAGAGGATGTCTTAGTGTCAAAAACTTGTATACTTATGCATAATTATTGGAGAACAAAAAAGGAAGTTTGGAGGGATAAAGCTTATGTCAGATTTCTCAGATAATGGAGAACTAACGGCGTGTAATGTTGTGGGGAGGATTAAATTGCAACAGACAGCATATATCTTGAAGATTGTACATTATACTTCTGGTTTTGTAGGCCCGTGCGAGTCAGAGGTTTCTTTTGTCATCCGAATGGACATTGACCATCTGGAATCGTGGTAATTCAATGTCCACGTGGCAAGGATGCTGGTATTTGTTTATCTAGCGCCATGTTGATGTACTGGACACCTATCATAACTTCTTTTTTATGTTCTGGATGCAGCATCTCAAGATATTAAAACTCTATGAGGGGGAAGGTTTTTAGTATATTTTAGTTTTACTATTTAGATTAGTGTGAGATACAGGAAACTTCTAGTCCTAGAAAAGCCCTTAATTTGCGTCAACAGACATTATATTGTGTCTACAATGCTTATGCTGACAATACAACGTAAGCTCTGCATCTGATCTGACTCTACTGCATTCTGGAACAAGTCTTAATGAAAGTTGTTTATGATAGATAATTGAGTTCTGTTATGGTGTTTCTCTATGCATATTTTGTGCTCTTATATTATTAAAACCTTCTCTTTATGCAAAGATGTTGAATGTCCCCGGCCTGTCTGATGTCTTCGTCAGGTCTGTGATTTTGGCCTTTCTCGTTTAAAAGCGAACACATTTCTCTCGTCAAAGTCTGCTGCTGGGACTGTAAGTGCCTGATTCAACATATGATTTGTTCAACTTCCGCTCGTCTTTTTCTCTTCACGTCATCGATGCATTTTTTTAACTGGTTCTTCTTGTGAATAGCCGGAATGGATGGCACCTGAAGTTCTTCGTGATGAACCATCAAATGAGAAATCTGATGTATACAGCTT</genome_strand>
        <mrna_strand>AATATTTATCAAG...................................................................................AGGTAGCTTATATAGACTTCTTCATAAACCTGGTGCTAGGGAGGTTTTGGATGAAAGGCGTCGGTTGTCTATGGCATATGATGTG..........................................................................GCAAAGGGGATGAATTATCTACATAAACGCAATCCTCCCATCGTTCATAGAGATTTGAAATCTCCAAATCTTTTAGTGGACAAAAAATACACAGTGAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGTGATTTTGGTCTTTCTCGTTTAAAAGCGAATACATTTCTCTCATCAAAGTCTGCTGCTGGGACT...................................................................................................CCGGAATGGATGGCACCTGAAGTTCTTCGTGATGAACCATCAAATGAGAAATCTGATGTATACAGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E613191" ref_strand="+" ref_description="SGN-E613191 [62962]">
      <seq>caacgttgcaacaaccttggagtaatttgaacccagcacaggttgtagcagctgtgggctttaaggggaaaagactcgacattccacgtgacttgactcctcaagtggcgagcattattgaggcctgctgggccaaagaaccatggaaacgtccctcctttgctgcaatcatggatatgctgagaccactaattaaacctcctgtaacacctcctcaaccaggccgtacagacacgcaattgctcgcgtgaatgcgtgtaatagatgtatgatttctgcacatatttggcattctttgttaagcatcttctgggaggaacaaatctttgtttacttcaggcttttgttccgtacatatcagttcagaatgcccgtctagagccgtttattcttcacaaattcaagctgccatttctcccagaagaccatttgcaattgacttgtacgtttcctcgtggaaataatgtttagccatatgattttgttaatgccagcaactaacagttctttaatttgctatcaagaaatgattttgtatgtat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="47738" stop="49960"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48038" g_stop="48078" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="41" r_length="41" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48079" i_stop="48848" i_length="770">
            <donor d_prob="0.710" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48849" g_stop="48943" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="136" r_length="95" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="48944" i_stop="49031" i_length="88">
            <donor d_prob="0.955" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49032" g_stop="49234" g_length="203"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="339" r_length="203" r_score="0.980"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="49235" i_stop="49456" i_length="222">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="49457" g_stop="49661" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="340" r_stop="542" r_length="203" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E613191" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>544</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E613191" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48038" e_stop="48078"/>
          <exon e_start="48849" e_stop="48943"/>
          <exon e_start="49032" e_stop="49234"/>
          <exon e_start="49457" e_stop="49661"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACGTTGCAACAGCCTTGGAGTAATTTGAACCCAGCACAGGTTTGTATTTCTTATCTCTATGCTCTATTGTCCCGGGGGTGGGGGGTGGGGGGGAGAGGGGGAGCCCATTCTTATGTAAATGTAAAATCTGGAGAATGGGCTATGTCTGGAGCCATTCAATTTTGTGTCAGGAGTTGACTAAAGTCTTTGTTTCTGTTTATGTCTGGTAGACTCATACCAGGGGATGGAGAACAATCCGATTTGCTTCAGCAATTCTCTGAAGAGTCATTTATTCCTCATTTTATATACCTCTCTTCTCCATTTGGTTTAGGGAGAGAGCTAGTCATTCATTGGGCATTGAATGTCGATGTCAATGTTATAAAGATTCTTCATGCTTTGATTAGTATTCTCATATCAGCTTCTTTATAGCAAAGATCTTTCTCTGACGAAGATACAGTCAATTAAGAAATGTGGATAAAACGATATCAATCGCATGGAAGATATTTCTATAAGTTCCCTCTTTTGATTTCCGAATTTCTGATATTTCTCTTTGATTAAAAACCAGGGAGGGCACTCAATCTTGTCTTGGTATCTAGGTGGCAACACCTTTATGATACCTCTGATTGAAAACATTGATTTAATACTAGAAAGACAACTTGGATAATTTGCAACACTACTTGGCACTTGTATTGCATCTTGGCTATATTTTAAAACGGAACATATGCATTGTTATCTTTATTGGTATGCTCGTTGTTAAGAGATGAGATAAGAGGGGGTGTGATATCGATTCTTGTGAATTCTGTATTGGTTAAATGCATCTAAACCTGCAGGTTGTAGCAGCTGTGAGCTTTAAGGGGAAAAGACTCGACATTCCACGTGACTTGACTCCTCAAGTGGCAAGCATTATAGAGGCTTGCTGGGCCAAGTATGTTGCTATGTTCTTCCATAGTTCAGTCACATGGGTTTTGGTTTGCTTTGATGTGTACTTCAAGTTACTTTTGGTAATGTTGCAGAGAACCATGGAAACGTCCCTCCTTTGCTGCAATCATGGATATGCTGAGACCACTAATTAAACCTCCTGTAACACCTCCTCAACCAGGCCGTACAGACACGCAGTTGATTGCGTGAATGCGTGTAATAGATGTATGATTTCTGCACATATTTGGCATTCTTTGTTAATCATCTTCTGGGAGGAACAAATCTTTGTTTACTTCAGGTTCGTGTATCCTGAAGTCTCTCTCTTCCTTCTGCTTAAATTTTACATTTGTCTTGATGTACACATGTTACTCCAACTTAAGTCGAAGTTGGAAGTGTTGGTGATTGTTTCGACTTTCTGACTTCAACTTGGCAGATGTGAAGAGGGTTCACCTCTTAGCTTCCTATGCTGTTTCGTTTGATAGTATGTGAGCTTGTAACAACCTTTTTTTTTTATTTACAGGCTTTTGTTCCGTACATATTAGTTCAGAATGCCCGTCTAGAGCCATTTTTTTTCTTCACAAATTCAAGCAGCCATTTCTCCCAGAAGAGCATTTGCAATTGACTTGTACGTTTCCTCGTGGAAATAATGTCTAGCCATATGATTTTGTTAATGTAAGCAAATAACAGTTCTTCTATTTTCTATCAAGAAATGATTTTGTACGTAC</genome_strand>
        <mrna_strand>CAACGTTGCAACAACCTTGGAGTAATTTGAACCCAGCACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTAGCAGCTGTGGGCTTTAAGGGGAAAAGACTCGACATTCCACGTGACTTGACTCCTCAAGTGGCGAGCATTATTGAGGCCTGCTGGGCCAA........................................................................................AGAACCATGGAAACGTCCCTCCTTTGCTGCAATCATGGATATGCTGAGACCACTAATTAAACCTCCTGTAACACCTCCTCAACCAGGCCGTACAGACACGCAATTGCTCGCGTGAATGCGTGTAATAGATGTATGATTTCTGCACATATTTGGCATTCTTTGTTAAGCATCTTCTGGGAGGAACAAATCTTTGTTTACTTCAG..............................................................................................................................................................................................................................GCTTTTGTTCCGTACATATCAGTTCAGAATGCCCGTCTAGAGCC--GTTTATTCTTCACAAATTCAAGCTGCCATTTCTCCCAGAAGACCATTTGCAATTGACTTGTACGTTTCCTCGTGGAAATAATGTTTAGCCATATGATTTTGTTAATGCCAGCAACTAACAGTTCTTTAATTTGCTATCAAGAAATGATTTTGTATGTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E608355" ref_strand="+" ref_description="SGN-E608355 [24340]">
      <seq>ttgaggccctgctgggccaaagaaccatggaaacgtccctcctttgctgcaatcatggatatgctgagaccactaattaaacctcctgtaacacctcctcaaccaggccgtacagacacgcaattgctcgcgtgaatgcgtgtaataatgtatgatttctgcacatatttggcattctttgttaagcatcttctgggaggaacaaatctttgtttacttcaggcttttgttccgtacatattagttcagaatgcccgtctagagccgtttttttcttcacaaattcaagctgccatttctcccagaagaccatttgcaattgacttgtacgtttcctcgtggaaataatgtttagccatatgattttgttaatgccagcaactaacagttctttaatttgctatcaagaaatgacttttgtatgtataagaatttataatgggaagttgtcttataggacaaaacaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="48729" stop="49995"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48925" g_stop="48943" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="20" r_length="20" r_score="0.789"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48944" i_stop="49031" i_length="88">
            <donor d_prob="0.955" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49032" g_stop="49234" g_length="203"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="222" r_length="202" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="49235" i_stop="49456" i_length="222">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49457" g_stop="49678" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="444" r_length="222" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E608355" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>444</cumulative_length_of_scored_exons>
        <coverage percentage="0.943" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E608355" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48925" e_stop="48943"/>
          <exon e_start="49032" e_stop="49234"/>
          <exon e_start="49457" e_stop="49678"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGAGG-CTTGCTGGGCCAAGTATGTTGCTATGTTCTTCCATAGTTCAGTCACATGGGTTTTGGTTTGCTTTGATGTGTACTTCAAGTTACTTTTGGTAATGTTGCAGAGAACCATGGAAACGTCCCTCCTTTGCTGCAATCATGGATATGCTGAGACCACTAATTAAACCTCCTGTAACACCTCCTCAACCAGGCCGTACAGACACGCAGTTGATTGCGTGAATGCGTGTAATAGATGTATGATTTCTGCACATATTTGGCATTCTTTGTTAATCATCTTCTGGGAGGAACAAATCTTTGTTTACTTCAGGTTCGTGTATCCTGAAGTCTCTCTCTTCCTTCTGCTTAAATTTTACATTTGTCTTGATGTACACATGTTACTCCAACTTAAGTCGAAGTTGGAAGTGTTGGTGATTGTTTCGACTTTCTGACTTCAACTTGGCAGATGTGAAGAGGGTTCACCTCTTAGCTTCCTATGCTGTTTCGTTTGATAGTATGTGAGCTTGTAACAACCTTTTTTTTTTATTTACAGGCTTTTGTTCCGTACATATTAGTTCAGAATGCCCGTCTAGAGCCATTTTTTTTCTTCACAAATTCAAGCAGCCATTTCTCCCAGAAGAGCATTTGCAATTGACTTGTACGTTTCCTCGTGGAAATAATGTCTAGCCATATGATTTTGTTAATGTAAGCAAATAACAGTTCTTCTATTTTCTATCAAGAAATGA-TTTTGTACGTACAAGAATTTATAATGGGA</genome_strand>
        <mrna_strand>TTGAGGCCCTGCTGGGCCAA........................................................................................AGAACCATGGAAACGTCCCTCCTTTGCTGCAATCATGGATATGCTGAGACCACTAATTAAACCTCCTGTAACACCTCCTCAACCAGGCCGTACAGACACGCAATTGCTCGCGTGAATGCGTGTAATA-ATGTATGATTTCTGCACATATTTGGCATTCTTTGTTAAGCATCTTCTGGGAGGAACAAATCTTTGTTTACTTCAG..............................................................................................................................................................................................................................GCTTTTGTTCCGTACATATTAGTTCAGAATGCCCGTCTAGAGCC-GTTTTTTTCTTCACAAATTCAAGCTGCCATTTCTCCCAGAAGACCATTTGCAATTGACTTGTACGTTTCCTCGTGGAAATAATGTTTAGCCATATGATTTTGTTAATGCCAGCAACTAACAGTTCTTTAATTTGCTATCAAGAAATGACTTTTGTATGTATAAGAATTTATAATGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E355067" ref_strand="-" ref_description="SGN-E355067 [cTOS-18-A4]">
      <seq>ttgttaatcatcttctgggaggaacaaatctttgtttacttcaggcttttgttccgtacatattagttcagaatgcccgtctagagccattttttttcttcacaaattcaagcagccatttctcccagaagagcatttgcaattgacttgtacgtttcctcgtggaaataatgtctagccatatgattttgttaatgtaagcaaataacagttcttctattttctatcaagaaatgattttgtacgtacaagaatttataatgggaatgcacagttcgtatcaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="48891" stop="49995"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49191" g_stop="49234" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="44" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49235" i_stop="49456" i_length="222">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49457" g_stop="49702" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="290" r_length="246" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E355067" ref_strand="-">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>290</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355067" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="49191" e_stop="49234"/>
          <exon e_start="49457" e_stop="49702"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTAATCATCTTCTGGGAGGAACAAATCTTTGTTTACTTCAGGTTCGTGTATCCTGAAGTCTCTCTCTTCCTTCTGCTTAAATTTTACATTTGTCTTGATGTACACATGTTACTCCAACTTAAGTCGAAGTTGGAAGTGTTGGTGATTGTTTCGACTTTCTGACTTCAACTTGGCAGATGTGAAGAGGGTTCACCTCTTAGCTTCCTATGCTGTTTCGTTTGATAGTATGTGAGCTTGTAACAACCTTTTTTTTTTATTTACAGGCTTTTGTTCCGTACATATTAGTTCAGAATGCCCGTCTAGAGCCATTTTTTTTCTTCACAAATTCAAGCAGCCATTTCTCCCAGAAGAGCATTTGCAATTGACTTGTACGTTTCCTCGTGGAAATAATGTCTAGCCATATGATTTTGTTAATGTAAGCAAATAACAGTTCTTCTATTTTCTATCAAGAAATGATTTTGTACGTACAAGAATTTATAATGGGAATGCACAGTTCGTATCACGTCTTT</genome_strand>
        <mrna_strand>TTGTTAATCATCTTCTGGGAGGAACAAATCTTTGTTTACTTCAG..............................................................................................................................................................................................................................GCTTTTGTTCCGTACATATTAGTTCAGAATGCCCGTCTAGAGCCATTTTTTTTCTTCACAAATTCAAGCAGCCATTTCTCCCAGAAGAGCATTTGCAATTGACTTGTACGTTTCCTCGTGGAAATAATGTCTAGCCATATGATTTTGTTAATGTAAGCAAATAACAGTTCTTCTATTTTCTATCAAGAAATGATTTTGTACGTACAAGAATTTATAATGGGAATGCACAGTTCGTATCAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E356143" ref_strand="-" ref_description="SGN-E356143 [cTOS-20-I21]">
      <seq>ttgttaatcatcttctgggaggaacaaatctttgtttacttcaggcttttgttccgtacatattagttcagaatgcccgtctagagccattttttttcttcacaaattcaagcagccatttctcccagaagagcatttgcaattgacttgtacgtttcctcgtggaaataatgtctagccatatgattttgttaatgtaagcaaataacagttcttctattttctatcaagaaatgattttgtacgtacaagaatttataatgggaatgcacagttcgtatcaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="48891" stop="49995"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49191" g_stop="49234" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="44" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49235" i_stop="49456" i_length="222">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49457" g_stop="49702" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="290" r_length="246" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E356143" ref_strand="-">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>290</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356143" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="49191" e_stop="49234"/>
          <exon e_start="49457" e_stop="49702"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTAATCATCTTCTGGGAGGAACAAATCTTTGTTTACTTCAGGTTCGTGTATCCTGAAGTCTCTCTCTTCCTTCTGCTTAAATTTTACATTTGTCTTGATGTACACATGTTACTCCAACTTAAGTCGAAGTTGGAAGTGTTGGTGATTGTTTCGACTTTCTGACTTCAACTTGGCAGATGTGAAGAGGGTTCACCTCTTAGCTTCCTATGCTGTTTCGTTTGATAGTATGTGAGCTTGTAACAACCTTTTTTTTTTATTTACAGGCTTTTGTTCCGTACATATTAGTTCAGAATGCCCGTCTAGAGCCATTTTTTTTCTTCACAAATTCAAGCAGCCATTTCTCCCAGAAGAGCATTTGCAATTGACTTGTACGTTTCCTCGTGGAAATAATGTCTAGCCATATGATTTTGTTAATGTAAGCAAATAACAGTTCTTCTATTTTCTATCAAGAAATGATTTTGTACGTACAAGAATTTATAATGGGAATGCACAGTTCGTATCACGTCTTT</genome_strand>
        <mrna_strand>TTGTTAATCATCTTCTGGGAGGAACAAATCTTTGTTTACTTCAG..............................................................................................................................................................................................................................GCTTTTGTTCCGTACATATTAGTTCAGAATGCCCGTCTAGAGCCATTTTTTTTCTTCACAAATTCAAGCAGCCATTTCTCCCAGAAGAGCATTTGCAATTGACTTGTACGTTTCCTCGTGGAAATAATGTCTAGCCATATGATTTTGTTAATGTAAGCAAATAACAGTTCTTCTATTTTCTATCAAGAAATGATTTTGTACGTACAAGAATTTATAATGGGAATGCACAGTTCGTATCAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E577615" ref_strand="-" ref_description="SGN-E577615 [LE15AG06]">
      <seq>tagatatttcctgctaacatatactcttttaagttgtgaaatacgcaggtttgcagcactgaaggcgagtatgggacttctttagagaatttcggacttgaatgagtgaatgacattgctcgctcaagctttttccagtcgattcttctgtaattgcttgcttggatcttgtaccctcgcctaggcaaagcaatgatgtacatcagaaacagctggcgaagtccttctcagggcttagctcaggtggcaaaggtcgagggaagttcaagccttgcatcatgcgaactaagcctgatatttaagtggacattgtgtttggttccaagggttgggccagactgatttcttggttatcaagaaaaagatcctgctcagctattcggttccccttagcttatttgtatatatctaaatgtgtaggatgttcatcaggggcaatctgattattgttgtgtcaatgtaataattgataggttatcctggcaaaccatttgagaagtatctgtactgtgatattgatagggggaagaaatggtcatcagaaaggtgattagacatgacaaacttatagcttaccatggatatgattcctaaataagaggatattggggttgatcattagggtagaacattagtaagtagtccaacattgtttagtttccttattattgttctcctagtttcgtattctgcaattttagtattatctgttgttcctttttaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="52817" stop="49955"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52517" g_stop="52380" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="138" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52379" i_stop="50840" i_length="1540">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50839" g_stop="50248" g_length="592"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="730" r_length="592" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E577615" ref_strand="-">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>730</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E577615" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="52517" e_stop="52380"/>
          <exon e_start="50839" e_stop="50248"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGATATTTCCTGCTAACATATACTCTTTTAAGTTGTGAAATACGCAGGTTTGCAGCACTGAAGGCGAGTATGGGACTTCTTTAGAGAATTTCGGACTTGAATGAGTGAATGACATTGCTCGCTCAAGCTTTTTCCAGGTAAGGAGATCTTGTGGTGACTTATCATATGATTGCTTGATGAATTATTACTTTACCAGAATTCTTTGAGATGCAGCTGAATAACATGCACAGATGATGTTTTGGCATGATTTAATCTAAAAAACTAGCATGATTTAATCTAAAAAACTAGCTCATGAGGGGAGTATTCTCCAAGACAACAACCATTTCCTCAACCAACGTGGAGATAGTATAAGAGTCGGACCTATTTCAATTCTTGGTCTATCCGATGTTAGACCTCATTTGTACTGTTCATACTTCAAATGTCCCGGCATGGGCAATGCTGGGAGGGAAGGGGTGTTAAAAGTTACACTGGTAGTGAGATAGTTAACTAGTCTCCTTGTCTATGTTGCTTGGCCTCTCCAAAAATGTCGCCGCACTCGTGTCGGGATCCTCCAAAAAAGCACTATTTTTGGAGTATCCAAACCACACCCATAGACATCTTTGAAGAGTCTGAGCATCATAGCTCCTTGTATGGTCTTGGGCAATACTCGCCTCATGAGCTAGCTTTTGAAGGTTGAGTTAGGCCCGAGGTCCATTCTCTTATGGTATCAGACTCGAGCTTTGCTAAGCCAATTTGTACAATTGTCTTATTTCTATCTACTGTAATGCTCTGGGAGTTCTCTCAACTTGGTCATGGAGCCACTCTGAGCTTCTTCTCTCTCCCAATTCAGCTCATCGAGTCACAAAATTTTGATCTTTCCCCACTTTTTAGCCATTTGAGCCTACTCTCCTCATTTCCAGGCCCATTCTTCAGCCAGTTGATACTGATCTTTGTCTCTCTGTATCATGTCTACTCTTCGATGTGCTTAAAAAAAAGGATTTTGAATCCACGTGTAGACTCAAGATTTCAGTTACATGTGCAGGAGGGTGTTAGAGAACTTGTCTCTCATCGAGTTTGTAAAATTTTTCAAAAGGTTTTATAATGTATGGGGCCACTGCAGTCATTATCCTTAAGTTTCTGAATTGGATGATCTGGTTATTTGATTCTTATGTTAGTGCACTACTTTTTGTATTTTGACTCACCAAGCTCCGCTGGTGGCTGAAGTTTCTCTTTCTCAGATGAAACGAAAAACAAAGAAGGTGAATTAGTATAACTCCTTCAGGGCTTCCGCTTCCTCCCCATTTACCATAAATTTACTGAAGAACACTTTAGGAGACTCATACGGTCCTAGGTAGCTTATTATAGAAATATAAGAAAGACGAGGTGGAGGAACGGAAGACTCTAGCAGTGTTGGTAGAGTCAATAAATTTGTTTCCTTAAGATGCTACAGGGTACAAACCAGAGTTAATGTTATGACTAACGACGCCCACCCTTTTAGAGACACGTTAGAGGTAACATAATCAATCAATTTAAAAATTGTGAATTTGTCTGTATCGCGGGCTGATGTCAAACAATCTTTTCTGTGTCATGTTGAGTAGGTTGACCTTTTGAAAGTGTTCGATGCTTAAATAGCTTACACAAAACAGTATTCAAATTTTTGAACCCTTAAATTTGTGTTGAACTTCTCTTCCGGTGCAGTCGATTCTTCTGTAATTGCTTGCTTGGATCTTGTACCCTCGCCTAGGCAAAGCAATGATGTACATCAGAAACAGCTGGCGAAGTCCTTCTCAGGGCTTAGCTCAGGTGGCAAAGGTCGAGGGAAGTTCAAGCCTTGCATCATGCGAACTAAGCCTGATATTTAAGTGGACATTGTGTTTGGTTCCAAGGGTTGGGCCAGACTGATTTCTTGGTTATCAAGAAAAAGATCCTGCTCAGCTATTCGGTTCCCCTTAGCTTATTTGTATATATCTAAATGTGTAGGATGTTCATCAGGGGCAATCTGATTATTGTTGTGTCAATGTAATAATTGATAGGTTATCCTGGCAAACCATTTGAGAAGTATCTGTACTGTGATATTGATAGGGGGAAGAAATGGTCATCAGAAAGGTGATTAGACATGACAAACTTATAGCTTACCATGGATATGATTCCTAAATAAGAGGATATTGGGGTTGATCATTAGGGTAGAACATTAGTAAGTAGTCCAACATTGTTTAGTTTCCTTATTATTGTTCTCCTAGTTTCGTATTCTGCAATTTTAGTATTATCTGTTGTTCCTTTTTATTTTTGT</genome_strand>
        <mrna_strand>TAGATATTTCCTGCTAACATATACTCTTTTAAGTTGTGAAATACGCAGGTTTGCAGCACTGAAGGCGAGTATGGGACTTCTTTAGAGAATTTCGGACTTGAATGAGTGAATGACATTGCTCGCTCAAGCTTTTTCCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATTCTTCTGTAATTGCTTGCTTGGATCTTGTACCCTCGCCTAGGCAAAGCAATGATGTACATCAGAAACAGCTGGCGAAGTCCTTCTCAGGGCTTAGCTCAGGTGGCAAAGGTCGAGGGAAGTTCAAGCCTTGCATCATGCGAACTAAGCCTGATATTTAAGTGGACATTGTGTTTGGTTCCAAGGGTTGGGCCAGACTGATTTCTTGGTTATCAAGAAAAAGATCCTGCTCAGCTATTCGGTTCCCCTTAGCTTATTTGTATATATCTAAATGTGTAGGATGTTCATCAGGGGCAATCTGATTATTGTTGTGTCAATGTAATAATTGATAGGTTATCCTGGCAAACCATTTGAGAAGTATCTGTACTGTGATATTGATAGGGGGAAGAAATGGTCATCAGAAAGGTGATTAGACATGACAAACTTATAGCTTACCATGGATATGATTCCTAAATAAGAGGATATTGGGGTTGATCATTAGGGTAGAACATTAGTAAGTAGTCCAACATTGTTTAGTTTCCTTATTATTGTTCTCCTAGTTTCGTATTCTGCAATTTTAGTATTATCTGTTGTTCCTTTTTAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E375909" ref_strand="+" ref_description="SGN-E375909 [TUS-15-M22](-)">
      <seq>tttaagttgtgaatacgncaggtttgcagcactgaaggcgagtatgggacttctttagagaatttcggacttgaatgagtgaatgacattgctcgctcaagctttttccagtcgattcttctgtaattgcttgcttggatcttgtaccctcgcctaggcaaagcaatgatgtacatcagaaacagctggcgaagtccttctcagggcttagctcaggtggcaaaggtcgagggaagttcaagccttgcatcatgcgaactaagcctgatatttaagtggacattgtgtttggttccaagggttgggccagactgatttcttggttatcaagaaaaagatcctgctcagctattcggttccccttagcttatttgtatatatctaaatgtgtaggatgttcatcaggggcaatctgattattgttgtgtcaatgtaataattgataggttatcctggcaaaccatttgagaagtatctgtactgtgatattgatagggggaagaaatggtcatcagaaaggtgattagacatgacaaacttatagcttaccatggatatgattcctaaataagaggatattggggttgatcattagggtagaacattagtaagtagtccaacattgtttagtttccttattattgttctcctagtttcgtattctgcaattttagtattatctgttgttcctttttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="52790" stop="49955"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52490" g_stop="52380" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="111" r_length="111" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52379" i_stop="50840" i_length="1540">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50839" g_stop="50256" g_length="584"/>
          <reference_exon_boundary r_type="cDNA" r_start="112" r_stop="695" r_length="584" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="696" polyA_stop="705"/>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E375909" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>695</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E375909" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52490" e_stop="52380"/>
          <exon e_start="50839" e_stop="50256"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAAGTTGTGAAATACG-CAGGTTTGCAGCACTGAAGGCGAGTATGGGACTTCTTTAGAGAATTTCGGACTTGAATGAGTGAATGACATTGCTCGCTCAAGCTTTTTCCAGGTAAGGAGATCTTGTGGTGACTTATCATATGATTGCTTGATGAATTATTACTTTACCAGAATTCTTTGAGATGCAGCTGAATAACATGCACAGATGATGTTTTGGCATGATTTAATCTAAAAAACTAGCATGATTTAATCTAAAAAACTAGCTCATGAGGGGAGTATTCTCCAAGACAACAACCATTTCCTCAACCAACGTGGAGATAGTATAAGAGTCGGACCTATTTCAATTCTTGGTCTATCCGATGTTAGACCTCATTTGTACTGTTCATACTTCAAATGTCCCGGCATGGGCAATGCTGGGAGGGAAGGGGTGTTAAAAGTTACACTGGTAGTGAGATAGTTAACTAGTCTCCTTGTCTATGTTGCTTGGCCTCTCCAAAAATGTCGCCGCACTCGTGTCGGGATCCTCCAAAAAAGCACTATTTTTGGAGTATCCAAACCACACCCATAGACATCTTTGAAGAGTCTGAGCATCATAGCTCCTTGTATGGTCTTGGGCAATACTCGCCTCATGAGCTAGCTTTTGAAGGTTGAGTTAGGCCCGAGGTCCATTCTCTTATGGTATCAGACTCGAGCTTTGCTAAGCCAATTTGTACAATTGTCTTATTTCTATCTACTGTAATGCTCTGGGAGTTCTCTCAACTTGGTCATGGAGCCACTCTGAGCTTCTTCTCTCTCCCAATTCAGCTCATCGAGTCACAAAATTTTGATCTTTCCCCACTTTTTAGCCATTTGAGCCTACTCTCCTCATTTCCAGGCCCATTCTTCAGCCAGTTGATACTGATCTTTGTCTCTCTGTATCATGTCTACTCTTCGATGTGCTTAAAAAAAAGGATTTTGAATCCACGTGTAGACTCAAGATTTCAGTTACATGTGCAGGAGGGTGTTAGAGAACTTGTCTCTCATCGAGTTTGTAAAATTTTTCAAAAGGTTTTATAATGTATGGGGCCACTGCAGTCATTATCCTTAAGTTTCTGAATTGGATGATCTGGTTATTTGATTCTTATGTTAGTGCACTACTTTTTGTATTTTGACTCACCAAGCTCCGCTGGTGGCTGAAGTTTCTCTTTCTCAGATGAAACGAAAAACAAAGAAGGTGAATTAGTATAACTCCTTCAGGGCTTCCGCTTCCTCCCCATTTACCATAAATTTACTGAAGAACACTTTAGGAGACTCATACGGTCCTAGGTAGCTTATTATAGAAATATAAGAAAGACGAGGTGGAGGAACGGAAGACTCTAGCAGTGTTGGTAGAGTCAATAAATTTGTTTCCTTAAGATGCTACAGGGTACAAACCAGAGTTAATGTTATGACTAACGACGCCCACCCTTTTAGAGACACGTTAGAGGTAACATAATCAATCAATTTAAAAATTGTGAATTTGTCTGTATCGCGGGCTGATGTCAAACAATCTTTTCTGTGTCATGTTGAGTAGGTTGACCTTTTGAAAGTGTTCGATGCTTAAATAGCTTACACAAAACAGTATTCAAATTTTTGAACCCTTAAATTTGTGTTGAACTTCTCTTCCGGTGCAGTCGATTCTTCTGTAATTGCTTGCTTGGATCTTGTACCCTCGCCTAGGCAAAGCAATGATGTACATCAGAAACAGCTGGCGAAGTCCTTCTCAGGGCTTAGCTCAGGTGGCAAAGGTCGAGGGAAGTTCAAGCCTTGCATCATGCGAACTAAGCCTGATATTTAAGTGGACATTGTGTTTGGTTCCAAGGGTTGGGCCAGACTGATTTCTTGGTTATCAAGAAAAAGATCCTGCTCAGCTATTCGGTTCCCCTTAGCTTATTTGTATATATCTAAATGTGTAGGATGTTCATCAGGGGCAATCTGATTATTGTTGTGTCAATGTAATAATTGATAGGTTATCCTGGCAAACCATTTGAGAAGTATCTGTACTGTGATATTGATAGGGGGAAGAAATGGTCATCAGAAAGGTGATTAGACATGACAAACTTATAGCTTACCATGGATATGATTCCTAAATAAGAGGATATTGGGGTTGATCATTAGGGTAGAACATTAGTAAGTAGTCCAACATTGTTTAGTTTCCTTATTATTGTTCTCCTAGTTTCGTATTCTGCAATTTTAGTATTATCTGTTGTTCCTTTTT</genome_strand>
        <mrna_strand>TTTAAGTTGTG-AATACGNCAGGTTTGCAGCACTGAAGGCGAGTATGGGACTTCTTTAGAGAATTTCGGACTTGAATGAGTGAATGACATTGCTCGCTCAAGCTTTTTCCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATTCTTCTGTAATTGCTTGCTTGGATCTTGTACCCTCGCCTAGGCAAAGCAATGATGTACATCAGAAACAGCTGGCGAAGTCCTTCTCAGGGCTTAGCTCAGGTGGCAAAGGTCGAGGGAAGTTCAAGCCTTGCATCATGCGAACTAAGCCTGATATTTAAGTGGACATTGTGTTTGGTTCCAAGGGTTGGGCCAGACTGATTTCTTGGTTATCAAGAAAAAGATCCTGCTCAGCTATTCGGTTCCCCTTAGCTTATTTGTATATATCTAAATGTGTAGGATGTTCATCAGGGGCAATCTGATTATTGTTGTGTCAATGTAATAATTGATAGGTTATCCTGGCAAACCATTTGAGAAGTATCTGTACTGTGATATTGATAGGGGGAAGAAATGGTCATCAGAAAGGTGATTAGACATGACAAACTTATAGCTTACCATGGATATGATTCCTAAATAAGAGGATATTGGGGTTGATCATTAGGGTAGAACATTAGTAAGTAGTCCAACATTGTTTAGTTTCCTTATTATTGTTCTCCTAGTTTCGTATTCTGCAATTTTAGTATTATCTGTTGTTCCTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E249319" ref_strand="-" ref_description="SGN-E249319 [cLEF-50-I11]">
      <seq>cttgaatgagtgaatgacattgctcgctcaagctttttccagtcgattcttctgtaattgcttgcttggatcttgtaccctcgcctaggcaaagcaatgatgtacatcagaaacagctggcgaagtccttctcagggcttagctcaggtggcaaaggtcgagggaagttcaagccttgcatcatgcgaactaagcctgatatttaagtggacattgtgtttggttccaagggttgggccagactgatttcttggttatcaagaaaaagatcctgctcagctattcggttccccttagcttatttgtatatatctaaatgtgtaggatgttcatcaggggcaatctgattattgttgtgtcaatgtaataattgataggttatcctggcaaaccatttgagaagtatctgtactgtgatattgatagggggaagaaatggtcatcagaaaggtgattagacatgacaaacttatagcttaccatggatatgattcctaaataagaggatattggggttgatcattagggtagaacattagtaagtagtccaacattgtttagtttccttattattgttctcctagtttcgtattctgcaattttagtattatctgttgttcctttttaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="52721" stop="49955"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52421" g_stop="52380" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="42" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52379" i_stop="50840" i_length="1540">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50839" g_stop="50256" g_length="584"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="626" r_length="584" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E249319" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>626</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E249319" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="52421" e_stop="52380"/>
          <exon e_start="50839" e_stop="50256"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGAATGAGTGAATGACATTGCTCGCTCAAGCTTTTTCCAGGTAAGGAGATCTTGTGGTGACTTATCATATGATTGCTTGATGAATTATTACTTTACCAGAATTCTTTGAGATGCAGCTGAATAACATGCACAGATGATGTTTTGGCATGATTTAATCTAAAAAACTAGCATGATTTAATCTAAAAAACTAGCTCATGAGGGGAGTATTCTCCAAGACAACAACCATTTCCTCAACCAACGTGGAGATAGTATAAGAGTCGGACCTATTTCAATTCTTGGTCTATCCGATGTTAGACCTCATTTGTACTGTTCATACTTCAAATGTCCCGGCATGGGCAATGCTGGGAGGGAAGGGGTGTTAAAAGTTACACTGGTAGTGAGATAGTTAACTAGTCTCCTTGTCTATGTTGCTTGGCCTCTCCAAAAATGTCGCCGCACTCGTGTCGGGATCCTCCAAAAAAGCACTATTTTTGGAGTATCCAAACCACACCCATAGACATCTTTGAAGAGTCTGAGCATCATAGCTCCTTGTATGGTCTTGGGCAATACTCGCCTCATGAGCTAGCTTTTGAAGGTTGAGTTAGGCCCGAGGTCCATTCTCTTATGGTATCAGACTCGAGCTTTGCTAAGCCAATTTGTACAATTGTCTTATTTCTATCTACTGTAATGCTCTGGGAGTTCTCTCAACTTGGTCATGGAGCCACTCTGAGCTTCTTCTCTCTCCCAATTCAGCTCATCGAGTCACAAAATTTTGATCTTTCCCCACTTTTTAGCCATTTGAGCCTACTCTCCTCATTTCCAGGCCCATTCTTCAGCCAGTTGATACTGATCTTTGTCTCTCTGTATCATGTCTACTCTTCGATGTGCTTAAAAAAAAGGATTTTGAATCCACGTGTAGACTCAAGATTTCAGTTACATGTGCAGGAGGGTGTTAGAGAACTTGTCTCTCATCGAGTTTGTAAAATTTTTCAAAAGGTTTTATAATGTATGGGGCCACTGCAGTCATTATCCTTAAGTTTCTGAATTGGATGATCTGGTTATTTGATTCTTATGTTAGTGCACTACTTTTTGTATTTTGACTCACCAAGCTCCGCTGGTGGCTGAAGTTTCTCTTTCTCAGATGAAACGAAAAACAAAGAAGGTGAATTAGTATAACTCCTTCAGGGCTTCCGCTTCCTCCCCATTTACCATAAATTTACTGAAGAACACTTTAGGAGACTCATACGGTCCTAGGTAGCTTATTATAGAAATATAAGAAAGACGAGGTGGAGGAACGGAAGACTCTAGCAGTGTTGGTAGAGTCAATAAATTTGTTTCCTTAAGATGCTACAGGGTACAAACCAGAGTTAATGTTATGACTAACGACGCCCACCCTTTTAGAGACACGTTAGAGGTAACATAATCAATCAATTTAAAAATTGTGAATTTGTCTGTATCGCGGGCTGATGTCAAACAATCTTTTCTGTGTCATGTTGAGTAGGTTGACCTTTTGAAAGTGTTCGATGCTTAAATAGCTTACACAAAACAGTATTCAAATTTTTGAACCCTTAAATTTGTGTTGAACTTCTCTTCCGGTGCAGTCGATTCTTCTGTAATTGCTTGCTTGGATCTTGTACCCTCGCCTAGGCAAAGCAATGATGTACATCAGAAACAGCTGGCGAAGTCCTTCTCAGGGCTTAGCTCAGGTGGCAAAGGTCGAGGGAAGTTCAAGCCTTGCATCATGCGAACTAAGCCTGATATTTAAGTGGACATTGTGTTTGGTTCCAAGGGTTGGGCCAGACTGATTTCTTGGTTATCAAGAAAAAGATCCTGCTCAGCTATTCGGTTCCCCTTAGCTTATTTGTATATATCTAAATGTGTAGGATGTTCATCAGGGGCAATCTGATTATTGTTGTGTCAATGTAATAATTGATAGGTTATCCTGGCAAACCATTTGAGAAGTATCTGTACTGTGATATTGATAGGGGGAAGAAATGGTCATCAGAAAGGTGATTAGACATGACAAACTTATAGCTTACCATGGATATGATTCCTAAATAAGAGGATATTGGGGTTGATCATTAGGGTAGAACATTAGTAAGTAGTCCAACATTGTTTAGTTTCCTTATTATTGTTCTCCTAGTTTCGTATTCTGCAATTTTAGTATTATCTGTTGTTCCTTTTT</genome_strand>
        <mrna_strand>CTTGAATGAGTGAATGACATTGCTCGCTCAAGCTTTTTCCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATTCTTCTGTAATTGCTTGCTTGGATCTTGTACCCTCGCCTAGGCAAAGCAATGATGTACATCAGAAACAGCTGGCGAAGTCCTTCTCAGGGCTTAGCTCAGGTGGCAAAGGTCGAGGGAAGTTCAAGCCTTGCATCATGCGAACTAAGCCTGATATTTAAGTGGACATTGTGTTTGGTTCCAAGGGTTGGGCCAGACTGATTTCTTGGTTATCAAGAAAAAGATCCTGCTCAGCTATTCGGTTCCCCTTAGCTTATTTGTATATATCTAAATGTGTAGGATGTTCATCAGGGGCAATCTGATTATTGTTGTGTCAATGTAATAATTGATAGGTTATCCTGGCAAACCATTTGAGAAGTATCTGTACTGTGATATTGATAGGGGGAAGAAATGGTCATCAGAAAGGTGATTAGACATGACAAACTTATAGCTTACCATGGATATGATTCCTAAATAAGAGGATATTGGGGTTGATCATTAGGGTAGAACATTAGTAAGTAGTCCAACATTGTTTAGTTTCCTTATTATTGTTCTCCTAGTTTCGTATTCTGCAATTTTAGTATTATCTGTTGTTCCTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E212994" ref_strand="+" ref_description="SGN-E212994 [cLEC-72-E4]">
      <seq>agagttgtttacaggagatatttcttggtttgtatgtcggcgttacctatataaacctcccttcaaccccttttaccgactttttatctatcacccttatcgaaattttgaatcttttgatcacaaaaactattaaagtttcaatctttgatccataaaaaccacaaatctctttgtatgatatgaacccatttgataaaaaacaagaatctgatactgatacaaaaaccccatttttgactgaaatggactctgaatttgctgcgttttcaccaatttcactcccttttgctgacccatcttctccttttatcaattttggatcttttgccactcctttgagccaacatccagttggagaaggggaaggagaaggagaagggggagaaattgaacagccagctgagggaggattgggtgtgccgcagcctatggagtgtttacatgggatacaaattccgccatttttgtcaaagacttttgatttggttgaggaccctttattggatacgattatttcttggggtagaaatggagaaagctttgtagtttgggatccagtggagttttcaagattggttcttcctaggaatttcaagcacagtaatttctccagctttgttcgacagcttaatacatatgtttgcagcactgaaggcgagtatgggacttctttagagaatttcggacttgaatgagtgaatgacattgctcgctcaagctttttccagtcgattcttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="55445" stop="52080"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55145" g_stop="54505" g_length="641"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="641" r_length="641" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54504" i_stop="52470" i_length="2035">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52469" g_stop="52380" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="642" r_stop="731" r_length="90" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E212994" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>731</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E212994" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55145" e_stop="54505"/>
          <exon e_start="52469" e_stop="52380"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGTTGTTTACAGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTCAACCCCTTTTACCGACTTTTTATCTATCACCCTTATCGAAATTTTGAATCTTTTGATCACAAAAACTATTAAAGTTTCAATCTTTGATCCATAAAAACCACAAATCTCTTTGTATGATATGAACCCATTTGATAAAAAACAAGAATCTGATACTGATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACATCCAGTTGGAGAAGGGGAAGGAGAAGGAGAAGGGGGAGAAATTGAACAGCCAGCTGAGGGAGGATTGGGTGTGCCGCAGCCTATGGAGTGTTTACATGGGATACAAATTCCGCCATTTTTGTCAAAGACTTTTGATTTGGTTGAGGACCCTTTATTGGATACGATTATTTCTTGGGGTAGAAATGGAGAAAGCTTTGTAGTTTGGGATCCAGTGGAGTTTTCAAGATTGGTTCTTCCTAGGAATTTCAAGCACAGTAATTTCTCCAGCTTTGTTCGACAGCTTAATACATATGTGGGTATTAATTTTAGCACACTGGCCAACTTTTTCTGGCTAATGTGTTAAATCTCTAGTTCTCTAACTCTGTCTCTCTTTTTAATGATATTTTTTCCTTGTATGTAATTTCTGTTGTAGTTTTTCATGTATCTTTATTTTTTCCCTCATTTTTCTGTAGTTTGTTTGCTCTTTTGTTGTTGATATACTGTAAAGATAATGTCTTAGGATGTAAATGTAAATAGATTTTTCGCGTTGTAAACAGTATAGGCTCCTGCGATTGTAAATGAGAGTTGGAGAACTGTTTTTTCTTCTTGATAGTTCAATGTTTTTGGCATCTTGTGTAAATGATGTCATTGAGATCTTTAGTGGATAGTAAAATGGTGGGTTCTTAAGTAAAATGGTAAAGAGGTGCGCTGTTCGTGATGTGGGCTTGTAGATAAAGCTCCCTGCATTGATGCATCTGCTGAGTTTGGGAGGTTCATCTATTGCTGCAGGTAGAATTCAAAGGTTCTGATTAAACAGAGTGTTTAAGCTTTGTAGTTTATATATGGTCTAACTTCAAAAGATCTACTAATTGTGTATTTCTAGTGTAATGCAGCTCCTGGAACTCATGAAAATTTGACAGTTAGCATCTTGCTTTATGTAAAAATTTCATTTTGTTATATGATCATTATTCTCATGTTGTAGGTCTGATAGTTTAGGACGATTTTTGTTTCTGAATTACTTTTGGGCACCTTTATTCAGGGATTTCGCAAAATCGATGCTGACAGGTGGGAGTTTGCGAATGAAGGGTTCTCGAGAGGGAAGAGGCATTTGTTGAAGAACATACAGAGGCGAAGGTCACATCAGGGTGGGAGTTCTTCTGGATCATCTGCTGAAGCAGGGAAAGGTACTATGGATGAGATAGAGAAACTCAGGAATGAGAAGAGTTTGATGATGCAGGAAGTTGTTGAGTTGCAGCAGCAGCAGCGTGGAACAGTTCAACAAATGGAATCCGTTAATGAAAAGCTTCAGGCTGCAGAACAAAGACAGAAGCAGATGGTTTCATTCTTGGCCAAGGTGCTTCAAAATCCCACATTCTTGGCTCGTGTTCGGCAGATGAAGGAGCAAGGAGAAATTACTAGTCCAAGAACAATGAGGAAATTTGTTAAACATCAGTCACATGGTCCGGATGGAGTGGGGTCGTCTTCAATGGAAGGGCAGATAGTCAAGTTCAGGTCTGACTTTCAAGACCTTGCAGGATGCTTTGACAGCCCAGATTTCAATACAGTTGTGGATCAACAACTCCCAGAAATTGGTTTAGGAGCGGAAGCCATGCCTTTTGAAGGTGTTCCTGTTGCTGATGAACTGACAGTGGCACATGAACTTCTTAATTGTTCAGATCGGGAAATACGAGGAGCTTCATTCTTTAACTCCGAAGGCTCTCAATTCAAAGGGAAGAATGTAGCTAGTCCTCAAATAGAAGTTATGCCCGAGTACTTTGCCTCTTTTCCAGAGGAGATGGGGAAGGAGAAGAACGTTTCAGGATTTTCCACACCAGCTATTGGAAGTATGGTGAAAGATGAGGAACTTTGGGGTATGGGTTTTGAAGCCAGTGCTGGCATGCCAAGCACTGGTGCCGAGTTATGGGATAGTCGTAGCAGCTATGTTCCAGACTTTGGTGTTAGCTCTGGTTTGTCAGATTTATGGGATATAGATCCCTTGCAGGTAGCTGGAAGTTCTGGGGTCGATAAGTGGCCAGCTGATGGGTCTCCTTTTGGTCAGTCTGGAAGTCATGCAAACCAGCCCAAGAATGATAGTTTCTAGGAAAGAGTACCCTTGGGCCTTCAGTGTGCCATTGGGATACTGCCATCATTTAGTTGATGGGACATAATATTGAATGAGTGATTATAAATATTTTAGTTGATAATTACTTTTGACTGGTTCTTTTCTTCTATTCCCTCTCCTTGGTCTGCTATTTCTCCGCTAATTGTGCTGGACTGTGAATATTTGATGGCATAAATTGTAGATATTTCCTGCTAACATATACTCTTTTAAGTTGTGAAATACGCAGGTTTGCAGCACTGAAGGCGAGTATGGGACTTCTTTAGAGAATTTCGGACTTGAATGAGTGAATGACATTGCTCGCTCAAGCTTTTTCCAG</genome_strand>
        <mrna_strand>AGAGTTGTTTACAGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTCAACCCCTTTTACCGACTTTTTATCTATCACCCTTATCGAAATTTTGAATCTTTTGATCACAAAAACTATTAAAGTTTCAATCTTTGATCCATAAAAACCACAAATCTCTTTGTATGATATGAACCCATTTGATAAAAAACAAGAATCTGATACTGATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACATCCAGTTGGAGAAGGGGAAGGAGAAGGAGAAGGGGGAGAAATTGAACAGCCAGCTGAGGGAGGATTGGGTGTGCCGCAGCCTATGGAGTGTTTACATGGGATACAAATTCCGCCATTTTTGTCAAAGACTTTTGATTTGGTTGAGGACCCTTTATTGGATACGATTATTTCTTGGGGTAGAAATGGAGAAAGCTTTGTAGTTTGGGATCCAGTGGAGTTTTCAAGATTGGTTCTTCCTAGGAATTTCAAGCACAGTAATTTCTCCAGCTTTGTTCGACAGCTTAATACATAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGCAGCACTGAAGGCGAGTATGGGACTTCTTTAGAGAATTTCGGACTTGAATGAGTGAATGACATTGCTCGCTCAAGCTTTTTCCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E375910" ref_strand="+" ref_description="SGN-E375910 [TUS-15-M22]">
      <seq>ttcttaattgttcagatcaggaaatacgaggagcttcattctttaactccgaaggctctcaattcaaagggaagaatgtagctagtcctcaaatagaagttatgcccgagtactttgcctcttttccagaggagatggggaaggagaagaacgtttcaggattttccacaccagctattggaagtatggtgaaagatgaggaactttggggtatgggttttgaagccagtgctggcatgccaagcactggtgccgagttatgggatagtcgtagcagctatgttccagactttggtgttagctctggtttgtcagatttatgggatatagatcccttgcaggtagctggaagttctggggtcgataagtggccagctgatgggtctccttttggtcagtctggaagtcatgcaaaccagcccaagaatgatagtttctaggaaagagtacccttgggccttcagtgtgccattgggatactgccatcatttagttgatgggacataatattgaatgagtgattataaatattttagttgataattacttttgactggttcttttcttctattccctctccttggtctgctatttctccgctaattgtgctggactgtgaatatttgatggcataaattgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="53456" stop="52217"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53156" g_stop="52517" g_length="640"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="640" r_length="640" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E375910" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>640</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E375910" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53156" e_stop="52517"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTAATTGTTCAGATCGGGAAATACGAGGAGCTTCATTCTTTAACTCCGAAGGCTCTCAATTCAAAGGGAAGAATGTAGCTAGTCCTCAAATAGAAGTTATGCCCGAGTACTTTGCCTCTTTTCCAGAGGAGATGGGGAAGGAGAAGAACGTTTCAGGATTTTCCACACCAGCTATTGGAAGTATGGTGAAAGATGAGGAACTTTGGGGTATGGGTTTTGAAGCCAGTGCTGGCATGCCAAGCACTGGTGCCGAGTTATGGGATAGTCGTAGCAGCTATGTTCCAGACTTTGGTGTTAGCTCTGGTTTGTCAGATTTATGGGATATAGATCCCTTGCAGGTAGCTGGAAGTTCTGGGGTCGATAAGTGGCCAGCTGATGGGTCTCCTTTTGGTCAGTCTGGAAGTCATGCAAACCAGCCCAAGAATGATAGTTTCTAGGAAAGAGTACCCTTGGGCCTTCAGTGTGCCATTGGGATACTGCCATCATTTAGTTGATGGGACATAATATTGAATGAGTGATTATAAATATTTTAGTTGATAATTACTTTTGACTGGTTCTTTTCTTCTATTCCCTCTCCTTGGTCTGCTATTTCTCCGCTAATTGTGCTGGACTGTGAATATTTGATGGCATAAATTGT</genome_strand>
        <mrna_strand>TTCTTAATTGTTCAGATCAGGAAATACGAGGAGCTTCATTCTTTAACTCCGAAGGCTCTCAATTCAAAGGGAAGAATGTAGCTAGTCCTCAAATAGAAGTTATGCCCGAGTACTTTGCCTCTTTTCCAGAGGAGATGGGGAAGGAGAAGAACGTTTCAGGATTTTCCACACCAGCTATTGGAAGTATGGTGAAAGATGAGGAACTTTGGGGTATGGGTTTTGAAGCCAGTGCTGGCATGCCAAGCACTGGTGCCGAGTTATGGGATAGTCGTAGCAGCTATGTTCCAGACTTTGGTGTTAGCTCTGGTTTGTCAGATTTATGGGATATAGATCCCTTGCAGGTAGCTGGAAGTTCTGGGGTCGATAAGTGGCCAGCTGATGGGTCTCCTTTTGGTCAGTCTGGAAGTCATGCAAACCAGCCCAAGAATGATAGTTTCTAGGAAAGAGTACCCTTGGGCCTTCAGTGTGCCATTGGGATACTGCCATCATTTAGTTGATGGGACATAATATTGAATGAGTGATTATAAATATTTTAGTTGATAATTACTTTTGACTGGTTCTTTTCTTCTATTCCCTCTCCTTGGTCTGCTATTTCTCCGCTAATTGTGCTGGACTGTGAATATTTGATGGCATAAATTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E741094" ref_strand="+" ref_description="SGN-E741094 [GI|8347237]">
      <seq>caagaatccaaaaaaaaaaaaaaattaaaaaaaatggagcttcaggagaaaaactccaccgactttacagagttgtttacaggagatatttcttggtttgtatgtcggcgttacctatataaacttcccttcaaccccttttaccgactttttatctatcacccttatcgaaattttcaatcttttgatcacaaaaactattaaagtttcgatctttgatacataaaaccacaaatctctttatatgatatgaacccatttgataaaaaacaagaacctgatactgattcaaaaaccccatttttgactgaaatggactctgaatttgctgcgttttcaccaatttcactcccttttgctgacccatcttctccttttatcaattttggatcttttgccactcctttgagccaacatccagttggagaaggggaaagggaaggagaaggagaaggaggagaaattgaacagccagctgagggaggattgggtgtgccgcagcctatggagtgtttacatgggatacaaattccgccatttttgtcaaagacttttgatttggttgaggaccctttattggatacgattatttcttggggtacaaatggagaaagctttgtagtttgggatccagtggagttttcaagattggttcttcctaggaatttcaagcacagcaatttctccagctttgttcgacagcttaatacatatggatttcgcaaaatcgatgctgacaggtgggagtttgcgaatgaagggttctcgagagggaagaggcatttgttgaagaacatacagaggcgaaggtcacagcagggtgggagttcttctggatcatctgctgaagcaggaaaaggtactatggatgagatagagaaactcaggaatgagaagagtttgatgatgcaggaagttgttgagttgcagcagcagcagcatggaacagttcaactaatggaatccgttaatgaaaagcttcaggctgcagaacaaagacagaagcagatggtttcattcttggccaaggtgcttcaaaatcccacattcttggctcgtgttcggcagatgaaggagcaaggagaaattactagtccaagaacaatgaggaaatttgttaaacatcagtcacatggtccggatggagtgggatcgtcttcaatggaagggcagatagtcaagttcaggtctgactttcaagaccttgcaggatgctttgacagcccagatttcaatccagttgtggatcaacaactcccagaaactggtttaggagcggaagccatgccatttgaaggtggtcctgttgctgatggactgacagtggcacatgaacttcttaattgttcagatcgggaaatacgaggagcttcattctttaactccggaggctctcaattcaaagggaagaatgtagctagtcctcaaatagaagttatgcctgagtactttgcctcttttccagaggagatggggaaggagaagaacatttcaggattttctgcaccagctattggaagtatggtgaaagatgaggaactttggggtatgggttttgaagccagtgctggcatgccaagcactggccccgagttatgggatagtcttagcagctacgttccagacttcggtgttagctctggtttgtcagatttatgggatatagatcccttgcaggtagctggaagttctggggtcgataagtggccagctgacgggtctccttttggtcagtctgaaagccatgcgaaccagcccaagaatgatagtttctaggaaagagtacccttgggccttcagtgtgccattgggatactgccatcatttagttgatgcgacataatattgaatgagtgattataaatattttagttgataattacttttgactggttgaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="55502" stop="52298"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55211" g_stop="54505" g_length="707"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="714" r_length="714" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54504" i_stop="53779" i_length="726">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="53778" g_stop="52601" g_length="1178"/>
          <reference_exon_boundary r_type="cDNA" r_start="715" r_stop="1892" r_length="1178" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1897" polyA_stop="1914"/>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E741094" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>1885</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E741094" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55211" e_stop="54505"/>
          <exon e_start="53778" e_stop="52601"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGAATCCAAAAAAAAAATAAAA--AATTAAAATGGAGCTTCAGGAGAAAAACTCCACCGACTTTACAGAGTTGTTTACAGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTCAACCCCTTTTACCGACTTTTTATCTATCACCCTTATCGAAATTTTGAATCTTTTGATCACAAAAACTATTAAAGTTTCAATCTTTGATCCATAAAAACCACAAATCTCTTTGTATGATATGAACCCATTTGATAAAAAACAAGAATCTGATACTGATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACATCCAGTTGGAGAA---G---GGGAAGGAGAAGGAGAAGGGGGAGAAATTGAACAGCCAGCTGAGGGAGGATTGGGTGTGCCGCAGCCTATGGAGTGTTTACATGGGATACAAATTCCGCCATTTTTGTCAAAGACTTTTGATTTGGTTGAGGACCCTTTATTGGATACGATTATTTCTTGGGGTAGAAATGGAGAAAGCTTTGTAGTTTGGGATCCAGTGGAGTTTTCAAGATTGGTTCTTCCTAGGAATTTCAAGCACAGTAATTTCTCCAGCTTTGTTCGACAGCTTAATACATATGTGGGTATTAATTTTAGCACACTGGCCAACTTTTTCTGGCTAATGTGTTAAATCTCTAGTTCTCTAACTCTGTCTCTCTTTTTAATGATATTTTTTCCTTGTATGTAATTTCTGTTGTAGTTTTTCATGTATCTTTATTTTTTCCCTCATTTTTCTGTAGTTTGTTTGCTCTTTTGTTGTTGATATACTGTAAAGATAATGTCTTAGGATGTAAATGTAAATAGATTTTTCGCGTTGTAAACAGTATAGGCTCCTGCGATTGTAAATGAGAGTTGGAGAACTGTTTTTTCTTCTTGATAGTTCAATGTTTTTGGCATCTTGTGTAAATGATGTCATTGAGATCTTTAGTGGATAGTAAAATGGTGGGTTCTTAAGTAAAATGGTAAAGAGGTGCGCTGTTCGTGATGTGGGCTTGTAGATAAAGCTCCCTGCATTGATGCATCTGCTGAGTTTGGGAGGTTCATCTATTGCTGCAGGTAGAATTCAAAGGTTCTGATTAAACAGAGTGTTTAAGCTTTGTAGTTTATATATGGTCTAACTTCAAAAGATCTACTAATTGTGTATTTCTAGTGTAATGCAGCTCCTGGAACTCATGAAAATTTGACAGTTAGCATCTTGCTTTATGTAAAAATTTCATTTTGTTATATGATCATTATTCTCATGTTGTAGGTCTGATAGTTTAGGACGATTTTTGTTTCTGAATTACTTTTGGGCACCTTTATTCAGGGATTTCGCAAAATCGATGCTGACAGGTGGGAGTTTGCGAATGAAGGGTTCTCGAGAGGGAAGAGGCATTTGTTGAAGAACATACAGAGGCGAAGGTCACATCAGGGTGGGAGTTCTTCTGGATCATCTGCTGAAGCAGGGAAAGGTACTATGGATGAGATAGAGAAACTCAGGAATGAGAAGAGTTTGATGATGCAGGAAGTTGTTGAGTTGCAGCAGCAGCAGCGTGGAACAGTTCAACAAATGGAATCCGTTAATGAAAAGCTTCAGGCTGCAGAACAAAGACAGAAGCAGATGGTTTCATTCTTGGCCAAGGTGCTTCAAAATCCCACATTCTTGGCTCGTGTTCGGCAGATGAAGGAGCAAGGAGAAATTACTAGTCCAAGAACAATGAGGAAATTTGTTAAACATCAGTCACATGGTCCGGATGGAGTGGGGTCGTCTTCAATGGAAGGGCAGATAGTCAAGTTCAGGTCTGACTTTCAAGACCTTGCAGGATGCTTTGACAGCCCAGATTTCAATACAGTTGTGGATCAACAACTCCCAGAAATTGGTTTAGGAGCGGAAGCCATGCCTTTTGAAGGTGTTCCTGTTGCTGATGAACTGACAGTGGCACATGAACTTCTTAATTGTTCAGATCGGGAAATACGAGGAGCTTCATTCTTTAACTCCGAAGGCTCTCAATTCAAAGGGAAGAATGTAGCTAGTCCTCAAATAGAAGTTATGCCCGAGTACTTTGCCTCTTTTCCAGAGGAGATGGGGAAGGAGAAGAACGTTTCAGGATTTTCCACACCAGCTATTGGAAGTATGGTGAAAGATGAGGAACTTTGGGGTATGGGTTTTGAAGCCAGTGCTGGCATGCCAAGCACTGGTGCCGAGTTATGGGATAGTCGTAGCAGCTATGTTCCAGACTTTGGTGTTAGCTCTGGTTTGTCAGATTTATGGGATATAGATCCCTTGCAGGTAGCTGGAAGTTCTGGGGTCGATAAGTGGCCAGCTGATGGGTCTCCTTTTGGTCAGTCTGGAAGTCATGCAAACCAGCCCAAGAATGATAGTTTCTAGGAAAGAGTACCCTTGGGCCTTCAGTGTGCCATTGGGATACTGCCATCATTTAGTTGATGGGACATAATATTGAATGAGTGATTATAAATATTTTAGTTGATAATTACTTTTGACTG</genome_strand>
        <mrna_strand>CAAGAATCCAAAAAAAAAAAAAAATTAAAAAAAATGGAGCTTCAGGAGAAAAACTCCACCGACTTTACAGAGTTGTTTACAGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACTTCCCTTCAACCCCTTTTACCGACTTTTTATCTATCACCCTTATCGAAATTTTCAATCTTTTGATCACAAAAACTATTAAAGTTTCGATCTTTGATACAT-AAAACCACAAATCTCTTTATATGATATGAACCCATTTGATAAAAAACAAGAACCTGATACTGATTCAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACATCCAGTTGGAGAAGGGGAAAGGGAAGGAGAAGGAGAAGGAGGAGAAATTGAACAGCCAGCTGAGGGAGGATTGGGTGTGCCGCAGCCTATGGAGTGTTTACATGGGATACAAATTCCGCCATTTTTGTCAAAGACTTTTGATTTGGTTGAGGACCCTTTATTGGATACGATTATTTCTTGGGGTACAAATGGAGAAAGCTTTGTAGTTTGGGATCCAGTGGAGTTTTCAAGATTGGTTCTTCCTAGGAATTTCAAGCACAGCAATTTCTCCAGCTTTGTTCGACAGCTTAATACATAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATTTCGCAAAATCGATGCTGACAGGTGGGAGTTTGCGAATGAAGGGTTCTCGAGAGGGAAGAGGCATTTGTTGAAGAACATACAGAGGCGAAGGTCACAGCAGGGTGGGAGTTCTTCTGGATCATCTGCTGAAGCAGGAAAAGGTACTATGGATGAGATAGAGAAACTCAGGAATGAGAAGAGTTTGATGATGCAGGAAGTTGTTGAGTTGCAGCAGCAGCAGCATGGAACAGTTCAACTAATGGAATCCGTTAATGAAAAGCTTCAGGCTGCAGAACAAAGACAGAAGCAGATGGTTTCATTCTTGGCCAAGGTGCTTCAAAATCCCACATTCTTGGCTCGTGTTCGGCAGATGAAGGAGCAAGGAGAAATTACTAGTCCAAGAACAATGAGGAAATTTGTTAAACATCAGTCACATGGTCCGGATGGAGTGGGATCGTCTTCAATGGAAGGGCAGATAGTCAAGTTCAGGTCTGACTTTCAAGACCTTGCAGGATGCTTTGACAGCCCAGATTTCAATCCAGTTGTGGATCAACAACTCCCAGAAACTGGTTTAGGAGCGGAAGCCATGCCATTTGAAGGTGGTCCTGTTGCTGATGGACTGACAGTGGCACATGAACTTCTTAATTGTTCAGATCGGGAAATACGAGGAGCTTCATTCTTTAACTCCGGAGGCTCTCAATTCAAAGGGAAGAATGTAGCTAGTCCTCAAATAGAAGTTATGCCTGAGTACTTTGCCTCTTTTCCAGAGGAGATGGGGAAGGAGAAGAACATTTCAGGATTTTCTGCACCAGCTATTGGAAGTATGGTGAAAGATGAGGAACTTTGGGGTATGGGTTTTGAAGCCAGTGCTGGCATGCCAAGCACTGGCCCCGAGTTATGGGATAGTCTTAGCAGCTACGTTCCAGACTTCGGTGTTAGCTCTGGTTTGTCAGATTTATGGGATATAGATCCCTTGCAGGTAGCTGGAAGTTCTGGGGTCGATAAGTGGCCAGCTGACGGGTCTCCTTTTGGTCAGTCTGAAAGCCATGCGAACCAGCCCAAGAATGATAGTTTCTAGGAAAGAGTACCCTTGGGCCTTCAGTGTGCCATTGGGATACTGCCATCATTTAGTTGATGCGACATAATATTGAATGAGTGATTATAAATATTTTAGTTGATAATTACTTTTGACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E575527" ref_strand="+" ref_description="SGN-E575527 [35165]">
      <seq>ctaaaatatttataatcactcattcaatattacgtcccatcaactaaatgatggctagtatcccaatggcacactgaaggcccaagggtactcttcctaaaaactatcattcttgggctggttggcatggctttcagactgaccaaaaggagacccatnagctggccacttatcgaccccagaacttccagctgcctgcaagggatctatatcccacaaatctgacaaaccagagctaacaccgaagtcggggacatagctgctaagactaccccataactcggagccagtacttggcatgccagcactggcttcaaaacccatactccaaagttcctcgtctttcaccatacttccaatagctggtgcggaaaatcctgaaatgttcttctccttccccatctcctctggaaaagaggcaaagtactcaggcataacttctaattgaggactagctacattcttccctttgaaatgagagtcttcggggttaaagagtgaagctcctcctatttcccaatctgaacaattaaaaagtccatgtgccactgtcagtccctcagatgcaacagtaccaccttcaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="52321" stop="53483"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52621" g_stop="53203" g_length="583"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="586" r_length="586" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E575527" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>583</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E575527" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52621" e_stop="53203"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAAAATATTTATAATCACTCATTCAATATTATGTCCCATCAACTAAATGATGGC-AGTATCCCAATGGCACACTGAAGGCCCAAGGGTACTCTTTCCTAGAAACTATCATTCTTGGGCTGGTTTGCATGACTTCCAGACTGACCAAAAGGAGACCCATCAGCTGGCCACTTATCGACCCCAGAACTTCCAGCTACCTGCAAGGGATCTATATCCCATAAATCTGACAAACCAGAGCTAACACCAAAGTCTGGAACATAGCTGCTACGACTATCCCATAACTCGGCACCAGTGCTTGGCATGCCAGCACTGGCTTCAAAACCCATACCCCAAAGTTCCTCATCTTTCACCATACTTCCAATAGCTGGTGTGGAAAATCCTGAAACGTTCTTCTCCTTCCCCATCTCCTCTGGAAAAGAGGCAAAGTACTCGGGCATAACTTCTATTTGAGGACTAGCTACATTCTTCCCTTTGAATTGAGAGCCTTCGGAGTTAAAGAATGAAGCTCCTCGTATTTCCCGATCTGAACAATTAAGAAGTTCATGTGCCACTGTCAGTTCATC--A-GCAACAGGAACACCTTCAAAA</genome_strand>
        <mrna_strand>CTAAAATATTTATAATCACTCATTCAATATTACGTCCCATCAACTAAATGATGGCTAGTATCCCAATGGCACACTGAAGGCCCAAGGGTACTC-TTCCTAAAAACTATCATTCTTGGGCTGGTTGGCATGGCTTTCAGACTGACCAAAAGGAGACCCATNAGCTGGCCACTTATCGACCCCAGAACTTCCAGCTGCCTGCAAGGGATCTATATCCCACAAATCTGACAAACCAGAGCTAACACCGAAGTCGGGGACATAGCTGCTAAGACTACCCCATAACTCGGAGCCAGTACTTGGCATGCCAGCACTGGCTTCAAAACCCATACTCCAAAGTTCCTCGTCTTTCACCATACTTCCAATAGCTGGTGCGGAAAATCCTGAAATGTTCTTCTCCTTCCCCATCTCCTCTGGAAAAGAGGCAAAGTACTCAGGCATAACTTCTAATTGAGGACTAGCTACATTCTTCCCTTTGAAATGAGAGTCTTCGGGGTTAAAGAGTGAAGCTCCTCCTATTTCCCAATCTGAACAATTAAAAAGTCCATGTGCCACTGTCAGTCCCTCAGATGCAACAGTACCACCTTCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E202156" ref_strand="+" ref_description="SGN-E202156 [cLEC-7-O12]">
      <seq>ttcttaattgttcagatcaggaaatacgaggagcttcattctttaactccgaaggctctcaattcaaagggaagaatgtagctagtcctcaaatagaagttatgcccgagtactttgcctcttttccagaggagatggggaaggagaagaacgtttcaggattttccacaccagctattggaagtatggtgaaagatgaggaactttggggtatgggttttgaagccagtgctggcatgccaagcactggtgccgagttatgggatagtcgtagcagctatgttccagactttggtgttagctctggtttgtcagatttatgggatatagatcccttgcaggtagctggaagttctggggtcgataagtggccagctgatgggtctccttttggtcagtctggaagtcatgcaaaccagcccaagaatgatagtttctaggaaagagtacccttgggccttcagtgtgccattgggatactgccatcatttagttgatgggacataatattgaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="53456" stop="52342"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53156" g_stop="52642" g_length="515"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="515" r_length="515" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E202156" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E202156" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53156" e_stop="52642"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTAATTGTTCAGATCGGGAAATACGAGGAGCTTCATTCTTTAACTCCGAAGGCTCTCAATTCAAAGGGAAGAATGTAGCTAGTCCTCAAATAGAAGTTATGCCCGAGTACTTTGCCTCTTTTCCAGAGGAGATGGGGAAGGAGAAGAACGTTTCAGGATTTTCCACACCAGCTATTGGAAGTATGGTGAAAGATGAGGAACTTTGGGGTATGGGTTTTGAAGCCAGTGCTGGCATGCCAAGCACTGGTGCCGAGTTATGGGATAGTCGTAGCAGCTATGTTCCAGACTTTGGTGTTAGCTCTGGTTTGTCAGATTTATGGGATATAGATCCCTTGCAGGTAGCTGGAAGTTCTGGGGTCGATAAGTGGCCAGCTGATGGGTCTCCTTTTGGTCAGTCTGGAAGTCATGCAAACCAGCCCAAGAATGATAGTTTCTAGGAAAGAGTACCCTTGGGCCTTCAGTGTGCCATTGGGATACTGCCATCATTTAGTTGATGGGACATAATATTGAAT</genome_strand>
        <mrna_strand>TTCTTAATTGTTCAGATCAGGAAATACGAGGAGCTTCATTCTTTAACTCCGAAGGCTCTCAATTCAAAGGGAAGAATGTAGCTAGTCCTCAAATAGAAGTTATGCCCGAGTACTTTGCCTCTTTTCCAGAGGAGATGGGGAAGGAGAAGAACGTTTCAGGATTTTCCACACCAGCTATTGGAAGTATGGTGAAAGATGAGGAACTTTGGGGTATGGGTTTTGAAGCCAGTGCTGGCATGCCAAGCACTGGTGCCGAGTTATGGGATAGTCGTAGCAGCTATGTTCCAGACTTTGGTGTTAGCTCTGGTTTGTCAGATTTATGGGATATAGATCCCTTGCAGGTAGCTGGAAGTTCTGGGGTCGATAAGTGGCCAGCTGATGGGTCTCCTTTTGGTCAGTCTGGAAGTCATGCAAACCAGCCCAAGAATGATAGTTTCTAGGAAAGAGTACCCTTGGGCCTTCAGTGTGCCATTGGGATACTGCCATCATTTAGTTGATGGGACATAATATTGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E207709" ref_strand="+" ref_description="SGN-E207709 [cLEC-32-C19]">
      <seq>ttcttaattgttcagatcaggaaatacgaggagcttcattctttaactccgaaggctctcaattcaaagggaagaatgtagctagtcctcaaatagaagttatgcccgagtactttgcctcttttccagaggagatggggaaggagaagaacgtttcaggattttccacaccagctattggaagtatggtgaaagatgaggaactttggggtatgggttttgaagccagtgctggcatgccaagcactggtgccgagttatgggatagtcgtagcagctatgttccagactttggtgttagctctggtttgtcagatttatgggatatagatcccttgcaggtagctggaagttctggggtcgataagtggccagctgatgggtctccttttggtcagtctggaagtcatgcaaaccagcccaagaatgatagtttctaggaaagagtacccttgggccttcagtgtgccattgggatactgccatcatttagttgatgggacataatattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="53456" stop="52345"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53156" g_stop="52645" g_length="512"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="512" r_length="512" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E207709" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E207709" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53156" e_stop="52645"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTAATTGTTCAGATCGGGAAATACGAGGAGCTTCATTCTTTAACTCCGAAGGCTCTCAATTCAAAGGGAAGAATGTAGCTAGTCCTCAAATAGAAGTTATGCCCGAGTACTTTGCCTCTTTTCCAGAGGAGATGGGGAAGGAGAAGAACGTTTCAGGATTTTCCACACCAGCTATTGGAAGTATGGTGAAAGATGAGGAACTTTGGGGTATGGGTTTTGAAGCCAGTGCTGGCATGCCAAGCACTGGTGCCGAGTTATGGGATAGTCGTAGCAGCTATGTTCCAGACTTTGGTGTTAGCTCTGGTTTGTCAGATTTATGGGATATAGATCCCTTGCAGGTAGCTGGAAGTTCTGGGGTCGATAAGTGGCCAGCTGATGGGTCTCCTTTTGGTCAGTCTGGAAGTCATGCAAACCAGCCCAAGAATGATAGTTTCTAGGAAAGAGTACCCTTGGGCCTTCAGTGTGCCATTGGGATACTGCCATCATTTAGTTGATGGGACATAATATTG</genome_strand>
        <mrna_strand>TTCTTAATTGTTCAGATCAGGAAATACGAGGAGCTTCATTCTTTAACTCCGAAGGCTCTCAATTCAAAGGGAAGAATGTAGCTAGTCCTCAAATAGAAGTTATGCCCGAGTACTTTGCCTCTTTTCCAGAGGAGATGGGGAAGGAGAAGAACGTTTCAGGATTTTCCACACCAGCTATTGGAAGTATGGTGAAAGATGAGGAACTTTGGGGTATGGGTTTTGAAGCCAGTGCTGGCATGCCAAGCACTGGTGCCGAGTTATGGGATAGTCGTAGCAGCTATGTTCCAGACTTTGGTGTTAGCTCTGGTTTGTCAGATTTATGGGATATAGATCCCTTGCAGGTAGCTGGAAGTTCTGGGGTCGATAAGTGGCCAGCTGATGGGTCTCCTTTTGGTCAGTCTGGAAGTCATGCAAACCAGCCCAAGAATGATAGTTTCTAGGAAAGAGTACCCTTGGGCCTTCAGTGTGCCATTGGGATACTGCCATCATTTAGTTGATGGGACATAATATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E202010" ref_strand="+" ref_description="SGN-E202010 [cLEC-7-D3]">
      <seq>ttcttaattgttcagatcaggaaatacgaggagcttcattctttaactccgaaggctctcaattcaaagggaagaatgtagctagtcctcaaatagaagttatgcccgagtactttgcctcttttccagaggagatggggaaggagaagaacgtttcaggattttccacaccagctattggaagtatggtgaaagatgaggaactttggggtatgggttttgaagccagtgctggcatgccaagcactggtgccgagttatgggatagtcgtagcagctatgttccagactttggtgttagctctggtttgtcagatttatgggatatagatcccttgcaggtagctggaagttctggggtcgataagtggccagctgatgggtctccttttggtcagtctggaagtcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="53456" stop="52446"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53156" g_stop="52746" g_length="411"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="411" r_length="411" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E202010" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>411</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E202010" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53156" e_stop="52746"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTAATTGTTCAGATCGGGAAATACGAGGAGCTTCATTCTTTAACTCCGAAGGCTCTCAATTCAAAGGGAAGAATGTAGCTAGTCCTCAAATAGAAGTTATGCCCGAGTACTTTGCCTCTTTTCCAGAGGAGATGGGGAAGGAGAAGAACGTTTCAGGATTTTCCACACCAGCTATTGGAAGTATGGTGAAAGATGAGGAACTTTGGGGTATGGGTTTTGAAGCCAGTGCTGGCATGCCAAGCACTGGTGCCGAGTTATGGGATAGTCGTAGCAGCTATGTTCCAGACTTTGGTGTTAGCTCTGGTTTGTCAGATTTATGGGATATAGATCCCTTGCAGGTAGCTGGAAGTTCTGGGGTCGATAAGTGGCCAGCTGATGGGTCTCCTTTTGGTCAGTCTGGAAGTCATG</genome_strand>
        <mrna_strand>TTCTTAATTGTTCAGATCAGGAAATACGAGGAGCTTCATTCTTTAACTCCGAAGGCTCTCAATTCAAAGGGAAGAATGTAGCTAGTCCTCAAATAGAAGTTATGCCCGAGTACTTTGCCTCTTTTCCAGAGGAGATGGGGAAGGAGAAGAACGTTTCAGGATTTTCCACACCAGCTATTGGAAGTATGGTGAAAGATGAGGAACTTTGGGGTATGGGTTTTGAAGCCAGTGCTGGCATGCCAAGCACTGGTGCCGAGTTATGGGATAGTCGTAGCAGCTATGTTCCAGACTTTGGTGTTAGCTCTGGTTTGTCAGATTTATGGGATATAGATCCCTTGCAGGTAGCTGGAAGTTCTGGGGTCGATAAGTGGCCAGCTGATGGGTCTCCTTTTGGTCAGTCTGGAAGTCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E726359" ref_strand="+" ref_description="SGN-E726359 [LA11CD05]">
      <seq>ctatggatgagatagagaaactcaggaatgagaagagtttgatgatgcaggaagttgttgagttgcagcagcagcagcgtggaacagttcaacaaatggaatccgttaatgaaaagcttcaggctgcagaacaaagacagaagcagatggtttcattcttggccaaggtgcttcaaaatcccacattcttggctcgtgttcggcagatgaaggagcaaggagaaattactagtccaagaacaatgaggaaatttgttaaacatcagtcacatggtccggatggagtggggtcgtcttcaatggaagggcagatagtcaagttcaggtctgactttcaagaccttgcaggatgctttgacagcccagatttcaatacagttgtggatcaacaactcccagaaattggtttaggagcggaagccatgccttttgaaggtgttcctgttgctgatgaactgacagtggcacatgaacttcttaattgttcagatcgggaaatacgaggagcttcattctttaactccgaaggctctcaattcaaagggaagaatgtagctagtcctcaaatagaagttatgcccgagtactttgcctcttttccagaggagatggggaaggagaagaacgtttcaggattttccacaccagctattggaagtatggtgaaagatgaggaactttggggtatgggttttgaagccagtgctggcatgccaagcactggtgccgagttatgggatagtcgtagcagctatgttccagactttggtgttagctctggtttgtcagatttatgggatatagatcccttgcaggtagctggaagttctggggtcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="53930" stop="52494"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53630" g_stop="52794" g_length="837"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="837" r_length="837" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E726359" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>837</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E726359" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53630" e_stop="52794"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATGGATGAGATAGAGAAACTCAGGAATGAGAAGAGTTTGATGATGCAGGAAGTTGTTGAGTTGCAGCAGCAGCAGCGTGGAACAGTTCAACAAATGGAATCCGTTAATGAAAAGCTTCAGGCTGCAGAACAAAGACAGAAGCAGATGGTTTCATTCTTGGCCAAGGTGCTTCAAAATCCCACATTCTTGGCTCGTGTTCGGCAGATGAAGGAGCAAGGAGAAATTACTAGTCCAAGAACAATGAGGAAATTTGTTAAACATCAGTCACATGGTCCGGATGGAGTGGGGTCGTCTTCAATGGAAGGGCAGATAGTCAAGTTCAGGTCTGACTTTCAAGACCTTGCAGGATGCTTTGACAGCCCAGATTTCAATACAGTTGTGGATCAACAACTCCCAGAAATTGGTTTAGGAGCGGAAGCCATGCCTTTTGAAGGTGTTCCTGTTGCTGATGAACTGACAGTGGCACATGAACTTCTTAATTGTTCAGATCGGGAAATACGAGGAGCTTCATTCTTTAACTCCGAAGGCTCTCAATTCAAAGGGAAGAATGTAGCTAGTCCTCAAATAGAAGTTATGCCCGAGTACTTTGCCTCTTTTCCAGAGGAGATGGGGAAGGAGAAGAACGTTTCAGGATTTTCCACACCAGCTATTGGAAGTATGGTGAAAGATGAGGAACTTTGGGGTATGGGTTTTGAAGCCAGTGCTGGCATGCCAAGCACTGGTGCCGAGTTATGGGATAGTCGTAGCAGCTATGTTCCAGACTTTGGTGTTAGCTCTGGTTTGTCAGATTTATGGGATATAGATCCCTTGCAGGTAGCTGGAAGTTCTGGGGTCG</genome_strand>
        <mrna_strand>CTATGGATGAGATAGAGAAACTCAGGAATGAGAAGAGTTTGATGATGCAGGAAGTTGTTGAGTTGCAGCAGCAGCAGCGTGGAACAGTTCAACAAATGGAATCCGTTAATGAAAAGCTTCAGGCTGCAGAACAAAGACAGAAGCAGATGGTTTCATTCTTGGCCAAGGTGCTTCAAAATCCCACATTCTTGGCTCGTGTTCGGCAGATGAAGGAGCAAGGAGAAATTACTAGTCCAAGAACAATGAGGAAATTTGTTAAACATCAGTCACATGGTCCGGATGGAGTGGGGTCGTCTTCAATGGAAGGGCAGATAGTCAAGTTCAGGTCTGACTTTCAAGACCTTGCAGGATGCTTTGACAGCCCAGATTTCAATACAGTTGTGGATCAACAACTCCCAGAAATTGGTTTAGGAGCGGAAGCCATGCCTTTTGAAGGTGTTCCTGTTGCTGATGAACTGACAGTGGCACATGAACTTCTTAATTGTTCAGATCGGGAAATACGAGGAGCTTCATTCTTTAACTCCGAAGGCTCTCAATTCAAAGGGAAGAATGTAGCTAGTCCTCAAATAGAAGTTATGCCCGAGTACTTTGCCTCTTTTCCAGAGGAGATGGGGAAGGAGAAGAACGTTTCAGGATTTTCCACACCAGCTATTGGAAGTATGGTGAAAGATGAGGAACTTTGGGGTATGGGTTTTGAAGCCAGTGCTGGCATGCCAAGCACTGGTGCCGAGTTATGGGATAGTCGTAGCAGCTATGTTCCAGACTTTGGTGTTAGCTCTGGTTTGTCAGATTTATGGGATATAGATCCCTTGCAGGTAGCTGGAAGTTCTGGGGTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E204650" ref_strand="+" ref_description="SGN-E204650 [cLEC-14-K2]">
      <seq>ttcttaattgttcagatcaggaaatacgaggagcttcattctttaactccgaaggctctcaattcaaagggaagaatgtagctagtcctcaaatagaagttatgcccgagtactttgcctcttttccagaggagatggggaaggagaagaacgtttcatgattttccacaccagctattggaagtatggtgaaagatgaggaactttggggtatgggttttgaagccagtgctggcatgccaagcactggtgccgagttatgggatagtcgtagcagctatgttccagacttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="53456" stop="52564"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53156" g_stop="52864" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="293" r_length="293" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E204650" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>293</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E204650" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53156" e_stop="52864"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTAATTGTTCAGATCGGGAAATACGAGGAGCTTCATTCTTTAACTCCGAAGGCTCTCAATTCAAAGGGAAGAATGTAGCTAGTCCTCAAATAGAAGTTATGCCCGAGTACTTTGCCTCTTTTCCAGAGGAGATGGGGAAGGAGAAGAACGTTTCAGGATTTTCCACACCAGCTATTGGAAGTATGGTGAAAGATGAGGAACTTTGGGGTATGGGTTTTGAAGCCAGTGCTGGCATGCCAAGCACTGGTGCCGAGTTATGGGATAGTCGTAGCAGCTATGTTCCAGACTTT</genome_strand>
        <mrna_strand>TTCTTAATTGTTCAGATCAGGAAATACGAGGAGCTTCATTCTTTAACTCCGAAGGCTCTCAATTCAAAGGGAAGAATGTAGCTAGTCCTCAAATAGAAGTTATGCCCGAGTACTTTGCCTCTTTTCCAGAGGAGATGGGGAAGGAGAAGAACGTTTCATGATTTTCCACACCAGCTATTGGAAGTATGGTGAAAGATGAGGAACTTTGGGGTATGGGTTTTGAAGCCAGTGCTGGCATGCCAAGCACTGGTGCCGAGTTATGGGATAGTCGTAGCAGCTATGTTCCAGACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E367152" ref_strand="+" ref_description="SGN-E367152 [cLPT-5-B12]">
      <seq>aatgagaacagtttgatgatgcaggaagttgttgagttgcagcagcagcagcgtggaacagttcaacaaatggaatccgttaatgaaaagcttcatgctgcagaacaaagacagaagcagatggtttcattcttggccaaagtgcttcaaaatcccacattcttggctcgtgttcggcagatgaaggagcaaggagaaataactagtccaagaacaatgaggaaatttgttaaacatcagtcacatggtccggatggagtggggtcgtcttcaatggaagggcagatagtcaagttcaggtctgactttcaagaccttgcaggatgctttgacagcccagatttcaatccagttgtggatcaacaactcccagaaactggtttaggagcggaagccatgccttttgaaggtggtcctgttgctgatggactgacagtggcacatgaacttcttaattgttcagatcgggaaatacgaggagcttcattctttaactccgaaggctctcaattcaaagggaagaatgtagctagtcctcaaatagaagttatgcctgagtactttgcctcttttccagaggagatgggaaaggagaagaacatttcaggattttctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="53904" stop="52691"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53604" g_stop="52988" g_length="617"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="617" r_length="617" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E367152" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>617</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E367152" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53604" e_stop="52988"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGAGAAGAGTTTGATGATGCAGGAAGTTGTTGAGTTGCAGCAGCAGCAGCGTGGAACAGTTCAACAAATGGAATCCGTTAATGAAAAGCTTCAGGCTGCAGAACAAAGACAGAAGCAGATGGTTTCATTCTTGGCCAAGGTGCTTCAAAATCCCACATTCTTGGCTCGTGTTCGGCAGATGAAGGAGCAAGGAGAAATTACTAGTCCAAGAACAATGAGGAAATTTGTTAAACATCAGTCACATGGTCCGGATGGAGTGGGGTCGTCTTCAATGGAAGGGCAGATAGTCAAGTTCAGGTCTGACTTTCAAGACCTTGCAGGATGCTTTGACAGCCCAGATTTCAATACAGTTGTGGATCAACAACTCCCAGAAATTGGTTTAGGAGCGGAAGCCATGCCTTTTGAAGGTGTTCCTGTTGCTGATGAACTGACAGTGGCACATGAACTTCTTAATTGTTCAGATCGGGAAATACGAGGAGCTTCATTCTTTAACTCCGAAGGCTCTCAATTCAAAGGGAAGAATGTAGCTAGTCCTCAAATAGAAGTTATGCCCGAGTACTTTGCCTCTTTTCCAGAGGAGATGGGGAAGGAGAAGAACGTTTCAGGATTTTCCAC</genome_strand>
        <mrna_strand>AATGAGAACAGTTTGATGATGCAGGAAGTTGTTGAGTTGCAGCAGCAGCAGCGTGGAACAGTTCAACAAATGGAATCCGTTAATGAAAAGCTTCATGCTGCAGAACAAAGACAGAAGCAGATGGTTTCATTCTTGGCCAAAGTGCTTCAAAATCCCACATTCTTGGCTCGTGTTCGGCAGATGAAGGAGCAAGGAGAAATAACTAGTCCAAGAACAATGAGGAAATTTGTTAAACATCAGTCACATGGTCCGGATGGAGTGGGGTCGTCTTCAATGGAAGGGCAGATAGTCAAGTTCAGGTCTGACTTTCAAGACCTTGCAGGATGCTTTGACAGCCCAGATTTCAATCCAGTTGTGGATCAACAACTCCCAGAAACTGGTTTAGGAGCGGAAGCCATGCCTTTTGAAGGTGGTCCTGTTGCTGATGGACTGACAGTGGCACATGAACTTCTTAATTGTTCAGATCGGGAAATACGAGGAGCTTCATTCTTTAACTCCGAAGGCTCTCAATTCAAAGGGAAGAATGTAGCTAGTCCTCAAATAGAAGTTATGCCTGAGTACTTTGCCTCTTTTCCAGAGGAGATGGGAAAGGAGAAGAACATTTCAGGATTTTCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E315254" ref_strand="+" ref_description="SGN-E315254 [cTOA-24-A8]">
      <seq>ctttattggatacgattatttcttggggtagaaatggagaaagctttgtagtttgggatccagtggagttttcaagattggttcttcctaggaatttcaagcacagtaatttctccagctttgttcgacagcttaatacatatgtgggtattaattttagcacactggccaactttttctggctaatgtgttaaatctctagttctctaactctgtctctctttttaatgatattttttccttgtatgtaatttctgttgtagtttttcatgtatctttattttttccctcatttttctgtagtttgtttgctcttttgttgttgatatactgtaaagataatgtcttaggatgtaaatgtaaatagatttttcgcgttgtaaacagtataggctcctgcgattgtaaatgagagttggagaactgttttttcttcttgatagttcaatgtttttggcatcttgtgtaaatgatgtcattgagatctttagtggatagtaaaatggtgggttcttaaggaaaatggtaaagaggtgcgctgttcatgatgtgggcttgtagataaagctccctgcattgatgcatctgctgagtttgggaggttcatctattgctgcaggtagaattcaaaggttctgattaaacagagtgtttaagctttgtagtttatatatggtctaacttcaaagatctactaattgtgtatttctagtgtaatgcagctcctggaactcatgaaaatttgancagtagcatcttgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="54947" stop="53585"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54647" g_stop="53885" g_length="763"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="762" r_length="762" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E315254" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>763</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E315254" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54647" e_stop="53885"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTATTGGATACGATTATTTCTTGGGGTAGAAATGGAGAAAGCTTTGTAGTTTGGGATCCAGTGGAGTTTTCAAGATTGGTTCTTCCTAGGAATTTCAAGCACAGTAATTTCTCCAGCTTTGTTCGACAGCTTAATACATATGTGGGTATTAATTTTAGCACACTGGCCAACTTTTTCTGGCTAATGTGTTAAATCTCTAGTTCTCTAACTCTGTCTCTCTTTTTAATGATATTTTTTCCTTGTATGTAATTTCTGTTGTAGTTTTTCATGTATCTTTATTTTTTCCCTCATTTTTCTGTAGTTTGTTTGCTCTTTTGTTGTTGATATACTGTAAAGATAATGTCTTAGGATGTAAATGTAAATAGATTTTTCGCGTTGTAAACAGTATAGGCTCCTGCGATTGTAAATGAGAGTTGGAGAACTGTTTTTTCTTCTTGATAGTTCAATGTTTTTGGCATCTTGTGTAAATGATGTCATTGAGATCTTTAGTGGATAGTAAAATGGTGGGTTCTTAAGTAAAATGGTAAAGAGGTGCGCTGTTCGTGATGTGGGCTTGTAGATAAAGCTCCCTGCATTGATGCATCTGCTGAGTTTGGGAGGTTCATCTATTGCTGCAGGTAGAATTCAAAGGTTCTGATTAAACAGAGTGTTTAAGCTTTGTAGTTTATATATGGTCTAACTTCAAAAGATCTACTAATTGTGTATTTCTAGTGTAATGCAGCTCCTGGAACTCATGAAAATTTGACAGTTAGCATCTTGCT</genome_strand>
        <mrna_strand>CTTTATTGGATACGATTATTTCTTGGGGTAGAAATGGAGAAAGCTTTGTAGTTTGGGATCCAGTGGAGTTTTCAAGATTGGTTCTTCCTAGGAATTTCAAGCACAGTAATTTCTCCAGCTTTGTTCGACAGCTTAATACATATGTGGGTATTAATTTTAGCACACTGGCCAACTTTTTCTGGCTAATGTGTTAAATCTCTAGTTCTCTAACTCTGTCTCTCTTTTTAATGATATTTTTTCCTTGTATGTAATTTCTGTTGTAGTTTTTCATGTATCTTTATTTTTTCCCTCATTTTTCTGTAGTTTGTTTGCTCTTTTGTTGTTGATATACTGTAAAGATAATGTCTTAGGATGTAAATGTAAATAGATTTTTCGCGTTGTAAACAGTATAGGCTCCTGCGATTGTAAATGAGAGTTGGAGAACTGTTTTTTCTTCTTGATAGTTCAATGTTTTTGGCATCTTGTGTAAATGATGTCATTGAGATCTTTAGTGGATAGTAAAATGGTGGGTTCTTAAGGAAAATGGTAAAGAGGTGCGCTGTTCATGATGTGGGCTTGTAGATAAAGCTCCCTGCATTGATGCATCTGCTGAGTTTGGGAGGTTCATCTATTGCTGCAGGTAGAATTCAAAGGTTCTGATTAAACAGAGTGTTTAAGCTTTGTAGTTTATATATGGTCTAACTTC-AAAGATCTACTAATTGTGTATTTCTAGTGTAATGCAGCTCCTGGAACTCATGAAAATTTGANCAGTAGCATCTTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E347162" ref_strand="+" ref_description="SGN-E347162 [cTOF-25-C4]">
      <seq>ttccgccatttttgtcaaagacttttgatttggttgaggaccctttattggatacgattatttcttggggtagaaatggagaaagctttgtagtttgggatccagtggagttttcaagattggttcttcctaggaatttcaagcacagtaatttctccagctttgttcgacagcttaatacatatgtgggtattaattttagcacactggccaactttttctggctaatgtgttaaatctctagttctctaactctgtctctctttttaatgatattttttccttgtatgtaatttctgttgtagtttttcatgtatctttattttttccctcatttttctgtagtttgtttgctcttttgttgttgatatactgtaaagataatgtcttaggatgtaaatgtaaatagatttttcgcgttgtaaacagtataggctcctgcgattgtaaatgagagttggagaactggtttttcttcttgatagttcaatgtttttggcatcttgtgtaaatgatgtcattgagatctttagtggatagtaaaatggtggggttcttanggaaaatggtaaagaggtgcgctgttcatgatgtgggcttgtagataaagctccctgcattgatgcatctgctgaggttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="54989" stop="53750"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54689" g_stop="54050" g_length="640"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="641" r_length="641" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E347162" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>640</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E347162" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54689" e_stop="54050"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCGCCATTTTTGTCAAAGACTTTTGATTTGGTTGAGGACCCTTTATTGGATACGATTATTTCTTGGGGTAGAAATGGAGAAAGCTTTGTAGTTTGGGATCCAGTGGAGTTTTCAAGATTGGTTCTTCCTAGGAATTTCAAGCACAGTAATTTCTCCAGCTTTGTTCGACAGCTTAATACATATGTGGGTATTAATTTTAGCACACTGGCCAACTTTTTCTGGCTAATGTGTTAAATCTCTAGTTCTCTAACTCTGTCTCTCTTTTTAATGATATTTTTTCCTTGTATGTAATTTCTGTTGTAGTTTTTCATGTATCTTTATTTTTTCCCTCATTTTTCTGTAGTTTGTTTGCTCTTTTGTTGTTGATATACTGTAAAGATAATGTCTTAGGATGTAAATGTAAATAGATTTTTCGCGTTGTAAACAGTATAGGCTCCTGCGATTGTAAATGAGAGTTGGAGAACTGTTTTTTCTTCTTGATAGTTCAATGTTTTTGGCATCTTGTGTAAATGATGTCATTGAGATCTTTAGTGGATAGTAAAATGGT-GGGTTCTTAAGTAAAATGGTAAAGAGGTGCGCTGTTCGTGATGTGGGCTTGTAGATAAAGCTCCCTGCATTGATGCATCTGCTGAGTTTGG</genome_strand>
        <mrna_strand>TTCCGCCATTTTTGTCAAAGACTTTTGATTTGGTTGAGGACCCTTTATTGGATACGATTATTTCTTGGGGTAGAAATGGAGAAAGCTTTGTAGTTTGGGATCCAGTGGAGTTTTCAAGATTGGTTCTTCCTAGGAATTTCAAGCACAGTAATTTCTCCAGCTTTGTTCGACAGCTTAATACATATGTGGGTATTAATTTTAGCACACTGGCCAACTTTTTCTGGCTAATGTGTTAAATCTCTAGTTCTCTAACTCTGTCTCTCTTTTTAATGATATTTTTTCCTTGTATGTAATTTCTGTTGTAGTTTTTCATGTATCTTTATTTTTTCCCTCATTTTTCTGTAGTTTGTTTGCTCTTTTGTTGTTGATATACTGTAAAGATAATGTCTTAGGATGTAAATGTAAATAGATTTTTCGCGTTGTAAACAGTATAGGCTCCTGCGATTGTAAATGAGAGTTGGAGAACTGGTTTTTCTTCTTGATAGTTCAATGTTTTTGGCATCTTGTGTAAATGATGTCATTGAGATCTTTAGTGGATAGTAAAATGGTGGGGTTCTTANGGAAAATGGTAAAGAGGTGCGCTGTTCATGATGTGGGCTTGTAGATAAAGCTCCCTGCATTGATGCATCTGCTGAGGTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E740148" ref_strand="+" ref_description="SGN-E740148 [LC20BB08]">
      <seq>aacctcaatctctttgtatgatatgaacccatttgataaaaaacaagaatctgatactgatacaaaaaccccatttttgactgaaatggactctgaatttgctgcgttttcaccaatttcactcccttttgctgacccatcttctccttttatcaattttggatcttttgccactcctttgagccaacatccagttggagaaggggaaggagaaggagaagggggagaaattgaacagccagctgagggaggattgggtgtgccgcagcctatggagtgtttacatgggatacaaattccgccatttttgtcaaagacttttgatttggttgaggaccctttattggatacgattatttcttggggtagaaatggagaaagctttgtagtttgggatccagtggagttttcaagattggttcttcctaggaatttcaagcacagtaatttctccagctttgttcgacagcttaatacatatgtgggtattaattttagcacactggccaactttttctggctaatgtgttaaatctctagttctctaactctgtctctctttttaatgatattttttccttgtatgtaatttctgttgtagtttttcatgtatctttattttttccctcatttttctgtagtttgtttgctcttttgttgttgatatactgtaaagataatgtcttaggatgtaaatgtaaatagatttttcgcgttgtaaacaatataggctcctgcgattgtaaatgagagttggagaactgttttttcttcttgaaagttcaatgtttttggcatcttgtgtaaatgatgtcattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="55286" stop="53867"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54986" g_stop="54167" g_length="820"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="819" r_length="819" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E740148" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>820</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E740148" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54986" e_stop="54167"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCACAAATCTCTTTGTATGATATGAACCCATTTGATAAAAAACAAGAATCTGATACTGATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACATCCAGTTGGAGAAGGGGAAGGAGAAGGAGAAGGGGGAGAAATTGAACAGCCAGCTGAGGGAGGATTGGGTGTGCCGCAGCCTATGGAGTGTTTACATGGGATACAAATTCCGCCATTTTTGTCAAAGACTTTTGATTTGGTTGAGGACCCTTTATTGGATACGATTATTTCTTGGGGTAGAAATGGAGAAAGCTTTGTAGTTTGGGATCCAGTGGAGTTTTCAAGATTGGTTCTTCCTAGGAATTTCAAGCACAGTAATTTCTCCAGCTTTGTTCGACAGCTTAATACATATGTGGGTATTAATTTTAGCACACTGGCCAACTTTTTCTGGCTAATGTGTTAAATCTCTAGTTCTCTAACTCTGTCTCTCTTTTTAATGATATTTTTTCCTTGTATGTAATTTCTGTTGTAGTTTTTCATGTATCTTTATTTTTTCCCTCATTTTTCTGTAGTTTGTTTGCTCTTTTGTTGTTGATATACTGTAAAGATAATGTCTTAGGATGTAAATGTAAATAGATTTTTCGCGTTGTAAACAGTATAGGCTCCTGCGATTGTAAATGAGAGTTGGAGAACTGTTTTTTCTTCTTGATAGTTCAATGTTTTTGGCATCTTGTGTAAATGATGTCATTG</genome_strand>
        <mrna_strand>AACCTCAA-TCTCTTTGTATGATATGAACCCATTTGATAAAAAACAAGAATCTGATACTGATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACATCCAGTTGGAGAAGGGGAAGGAGAAGGAGAAGGGGGAGAAATTGAACAGCCAGCTGAGGGAGGATTGGGTGTGCCGCAGCCTATGGAGTGTTTACATGGGATACAAATTCCGCCATTTTTGTCAAAGACTTTTGATTTGGTTGAGGACCCTTTATTGGATACGATTATTTCTTGGGGTAGAAATGGAGAAAGCTTTGTAGTTTGGGATCCAGTGGAGTTTTCAAGATTGGTTCTTCCTAGGAATTTCAAGCACAGTAATTTCTCCAGCTTTGTTCGACAGCTTAATACATATGTGGGTATTAATTTTAGCACACTGGCCAACTTTTTCTGGCTAATGTGTTAAATCTCTAGTTCTCTAACTCTGTCTCTCTTTTTAATGATATTTTTTCCTTGTATGTAATTTCTGTTGTAGTTTTTCATGTATCTTTATTTTTTCCCTCATTTTTCTGTAGTTTGTTTGCTCTTTTGTTGTTGATATACTGTAAAGATAATGTCTTAGGATGTAAATGTAAATAGATTTTTCGCGTTGTAAACAATATAGGCTCCTGCGATTGTAAATGAGAGTTGGAGAACTGTTTTTTCTTCTTGAAAGTTCAATGTTTTTGGCATCTTGTGTAAATGATGTCATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E412322" ref_strand="+" ref_description="SGN-E412322 [STM-16-G19]">
      <seq>ttttttttttcaacgcgaaaaatctgtttacatttacaccctaaaacatcatctttacagtacatcaacaacataagagcaaacaaactacagaaaaatgaggggggaaataaagatacatgaaaatctacaacagaaattacatacaaaaaaaaaatcacaaaaaagagagagacaagagttagagaactagagatttaacacattagccaaaaaaaattggccagtgtgctaaaattaatacccacatatgtattaagctgtcgaacaaagctggagaaattgctgtgcttgaaattcctaggaagaaccaatcttgaaaactccactggatcccaaactacaaagctttctccatttctaccccaagaaataatcgaatccaataaagggtcctcaaccaaatcaaaagtctttgacaaaaatggcggaatttgtatcccatgtaaacactccatagggtgtggcacacccaatccttcctcagctggctgttcaatttctcctccttctccttctccatctccatctccatctccaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="53962" stop="55093"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54258" g_stop="54798" g_length="541"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="542" r_length="542" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E412322" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>541</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E412322" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54258" e_stop="54798"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATACTGTTTACAACGCGAAAAATCTATTTACATTTACATCCTAAGACATTATCTTTACAGTATATCAACAACAAAAGAGCAAACAAACTACAGAAAAATGAGGGAAAAAATAAAGATACATGAAAAACTACAACAGAAATTACATACAAGGAAAAAATATCATTAAAAAGAGAGAC-AGAGTTAGAGAACTAGAGATTTAACACATTAGCCAGAAAAAGTTGGCCAGTGTGCTAAAATTAATACCCACATATGTATTAAGCTGTCGAACAAAGCTGGAGAAATTACTGTGCTTGAAATTCCTAGGAAGAACCAATCTTGAAAACTCCACTGGATCCCAAACTACAAAGCTTTCTCCATTTCTACCCCAAGAAATAATCGTATCCAATAAAGGGTCCTCAACCAAATCAAAAGTCTTTGACAAAAATGGCGGAATTTGTATCCCATGTAAACACTCCATAGGCTGCGGCACACCCAATCCTCCCTCAGCTGGCTGTTCAATTTCTCCCCCTTCTCCTTCTCCTTCCCCTTCTCCAACTGGATG</genome_strand>
        <mrna_strand>TTTTTTTTTTCAACGCGAAAAATCTGTTTACATTTACACCCTAAAACATCATCTTTACAGTACATCAACAACATAAGAGCAAACAAACTACAGAAAAATGAGGGGGGAAATAAAGATACATGAAAATCTACAACAGAAATTACATACAAAAAAAAAATCACAAAAAAGAGAGAGACAAGAGTTAGAGAACTAGAGATTTAACACATTAGCCAAAAAAAATTGGCCAGTGTGCTAAAATTAATACCCACATATGTATTAAGCTGTCGAACAAAGCTGGAGAAATTGCTGTGCTTGAAATTCCTAGGAAGAACCAATCTTGAAAACTCCACTGGATCCCAAACTACAAAGCTTTCTCCATTTCTACCCCAAGAAATAATCGAATCCAATAAAGGGTCCTCAACCAAATCAAAAGTCTTTGACAAAAATGGCGGAATTTGTATCCCATGTAAACACTCCATAGGGTGTGGCACACCCAATCCTTCCTCAGCTGGCTGTTCAATTTCTCCTCCTTCTCCTTCTCCATCTCCATCTCCATCTCCAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E252726" ref_strand="+" ref_description="SGN-E252726 [cLEG-16-O4]">
      <seq>tttgactgaaatggactctgaatttgctgcgttttcaccaatttcactcccttttgctgacccatcttctccttttatcaattttggatcttttgccactcctttgagccaacatccagttggagaaggggaaggagaaggagaagggggagaaattgaacagccagctgagggaggattgggtgtgccgcagcctatggagtgtttacatgggatacaaattccgccatttttgtcaaagacttttgatttggttgaggaccctttattggatacgattatttcttggggtagaaatggagaaagctttgtagtttgggatccagtggagttttcaagattggttcttcctaggaatttcaagcacagtaatttctccagctttgttcgacagcttaatacatatgtgggtattaattttagcacactggccaactttttctggctaatgtgttaaatctctagttctctaactctgtctctctttttaatgatattttttccttgtatgtaatttctgttgtagtttttcatgtatctttattttttccctcatttttctgtagtttgtttgctcttttgttgttgatatactgtaaagataatgtcttacgatgtaaatgtaaatagatttttcgcgttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="55210" stop="53967"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54910" g_stop="54267" g_length="644"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="644" r_length="644" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E252726" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>644</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E252726" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54910" e_stop="54267"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACATCCAGTTGGAGAAGGGGAAGGAGAAGGAGAAGGGGGAGAAATTGAACAGCCAGCTGAGGGAGGATTGGGTGTGCCGCAGCCTATGGAGTGTTTACATGGGATACAAATTCCGCCATTTTTGTCAAAGACTTTTGATTTGGTTGAGGACCCTTTATTGGATACGATTATTTCTTGGGGTAGAAATGGAGAAAGCTTTGTAGTTTGGGATCCAGTGGAGTTTTCAAGATTGGTTCTTCCTAGGAATTTCAAGCACAGTAATTTCTCCAGCTTTGTTCGACAGCTTAATACATATGTGGGTATTAATTTTAGCACACTGGCCAACTTTTTCTGGCTAATGTGTTAAATCTCTAGTTCTCTAACTCTGTCTCTCTTTTTAATGATATTTTTTCCTTGTATGTAATTTCTGTTGTAGTTTTTCATGTATCTTTATTTTTTCCCTCATTTTTCTGTAGTTTGTTTGCTCTTTTGTTGTTGATATACTGTAAAGATAATGTCTTAGGATGTAAATGTAAATAGATTTTTCGCGTTGT</genome_strand>
        <mrna_strand>TTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACATCCAGTTGGAGAAGGGGAAGGAGAAGGAGAAGGGGGAGAAATTGAACAGCCAGCTGAGGGAGGATTGGGTGTGCCGCAGCCTATGGAGTGTTTACATGGGATACAAATTCCGCCATTTTTGTCAAAGACTTTTGATTTGGTTGAGGACCCTTTATTGGATACGATTATTTCTTGGGGTAGAAATGGAGAAAGCTTTGTAGTTTGGGATCCAGTGGAGTTTTCAAGATTGGTTCTTCCTAGGAATTTCAAGCACAGTAATTTCTCCAGCTTTGTTCGACAGCTTAATACATATGTGGGTATTAATTTTAGCACACTGGCCAACTTTTTCTGGCTAATGTGTTAAATCTCTAGTTCTCTAACTCTGTCTCTCTTTTTAATGATATTTTTTCCTTGTATGTAATTTCTGTTGTAGTTTTTCATGTATCTTTATTTTTTCCCTCATTTTTCTGTAGTTTGTTTGCTCTTTTGTTGTTGATATACTGTAAAGATAATGTCTTACGATGTAAATGTAAATAGATTTTTCGCGTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E201223" ref_strand="+" ref_description="SGN-E201223 [cLEC-10-A18]">
      <seq>tgataaaaaacaagaatctgatacatacaaaaaccccatttttgactgaaatggactctgaatttgctgcgttttcaccaatttcactcccttttgctgacccatcttctccttttatcaattttggatcttttgccactcctttgagccaacatccagttggagaaggggaaggagaaggagaagggggagaaattgatcatccacctgatggaggattgggtgtgccgcagcctatggagtgtttacatgggatacaaattccgccatttttgtcaaagacttttgatttggttgaggaccctttattggatacgattatttcttggggtagaaatggagaaagctttgtagtttgggatccagtggagctttcaagattggttcttcctaggaatttcaagcacagtaatttctccagctttgttcgacagcttaatacatatgtgggtattaattttagcacactggccaactttttctggctaatgtgttaaatctctagttctctaactctgtctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="55252" stop="54128"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54952" g_stop="54428" g_length="525"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="523" r_length="523" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E201223" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>525</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E201223" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54952" e_stop="54428"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATAAAAAACAAGAATCTGATACTGATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACATCCAGTTGGAGAAGGGGAAGGAGAAGGAGAAGGGGGAGAAATTGAACAGCCAGCTGAGGGAGGATTGGGTGTGCCGCAGCCTATGGAGTGTTTACATGGGATACAAATTCCGCCATTTTTGTCAAAGACTTTTGATTTGGTTGAGGACCCTTTATTGGATACGATTATTTCTTGGGGTAGAAATGGAGAAAGCTTTGTAGTTTGGGATCCAGTGGAGTTTTCAAGATTGGTTCTTCCTAGGAATTTCAAGCACAGTAATTTCTCCAGCTTTGTTCGACAGCTTAATACATATGTGGGTATTAATTTTAGCACACTGGCCAACTTTTTCTGGCTAATGTGTTAAATCTCTAGTTCTCTAACTCTGTCTCT</genome_strand>
        <mrna_strand>TGATAAAAAACAAGAATCTGATAC--ATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACATCCAGTTGGAGAAGGGGAAGGAGAAGGAGAAGGGGGAGAAATTGATCATCCACCTGATGGAGGATTGGGTGTGCCGCAGCCTATGGAGTGTTTACATGGGATACAAATTCCGCCATTTTTGTCAAAGACTTTTGATTTGGTTGAGGACCCTTTATTGGATACGATTATTTCTTGGGGTAGAAATGGAGAAAGCTTTGTAGTTTGGGATCCAGTGGAGCTTTCAAGATTGGTTCTTCCTAGGAATTTCAAGCACAGTAATTTCTCCAGCTTTGTTCGACAGCTTAATACATATGTGGGTATTAATTTTAGCACACTGGCCAACTTTTTCTGGCTAATGTGTTAAATCTCTAGTTCTCTAACTCTGTCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E618700" ref_strand="+" ref_description="SGN-E618700 [69381]">
      <seq>cagaaaaccatacaagaatcaaaaaaaaaaaaaaaaaaattaaaaaaattaaaatggagcttcaagagaaaaactccaccgactttacacagttgttttcaggagatatttcttggtttgtatgtcggcgttacctatataaacctcccttaaacccccttttaccggcttattatcaaacacccttttcgaaattttcaatcttttgatccaaaaaaactataaagtttcaatctttgatccataaaaccacaaatctctttgtatcatatgaacccatttgataaaaaacaagaatctgatactaatacaaaaaccccctttttgactgaaatggactctgaatttgctgcgttttcaccaatttcactcccttttgctgacccatcttctccttttatcaattttggatcttttgccactcctttgagccaacacccagttggagatggagatggagatggagaaggagaaggaggagaaattgaacagccagctgaggaaggattgggtgtgccanaccctatggagtgtttacatgggatacaaattccgccatttttgtcaaagactttcgatttggttgaggaccctttattggattcgattatttcttggggtagaaatggagaaagctttgtagtttgggatccaagtggagttttcaagattggttcttcctaggaatctcaagcacagcaatttctccagctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="55502" stop="54227"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55219" g_stop="54527" g_length="693"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="714" r_length="699" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E618700" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>693</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E618700" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55219" e_stop="54527"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACCATACAAGAATCCAAAAAAAAAATAAAAAATTAAAATGGAGCTTCAGGAGAAAAACTCCACCGACTTTACAGAGTTGTTTACAGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTCAA-CCCCTTTTACCGACTTTTTATCTATCACCCTTATCGAAATTTTGAATCTTTTGAT-CACAAAAACTATTAAAGTTTCAATCTTTGATCCATAAAAACCACAAATCTCTTTGTATGATATGAACCCATTTGATAAAAAACAAGAATCTGATACTGATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACATCCAGTTGGAGA---AG--GG-GAAGGAGAAGGAGAAGGGGGAGAAATTGAACAGCCAGCTGAGGGAGGATTGGGTGTGCCGCAGCCTATGGAGTGTTTACATGGGATACAAATTCCGCCATTTTTGTCAAAGACTTTTGATTTGGTTGAGGACCCTTTATTGGATACGATTATTTCTTGGGGTAGAAATGGAGAAAGCTTTGTAGTTTGGGATCC-AGTGGAGTTTTCAAGATTGGTTCTTCCTAGGAATTTCAAGCACAGTAATTTCTCCAGCTT</genome_strand>
        <mrna_strand>GAATCA-AAAAAAAAAAAAAAAAAATTAAAAAAATTAAAATGGAGCTTCAAGAGAAAAACTCCACCGACTTTACACAGTTGTTTTCAGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTAAACCCCCTTTTACCGGCTTATTATCAAACACCCTTTTCGAAATTTTCAATCTTTTGATCCAAAAAAACTA-TAAAGTTTCAATCTTTGATCCAT-AAAACCACAAATCTCTTTGTATCATATGAACCCATTTGATAAAAAACAAGAATCTGATACTAATACAAAAACCCCCTTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACACCCAGTTGGAGATGGAGATGGAGATGGAGAAGGAGAAGGAGGAGAAATTGAACAGCCAGCTGAGGAAGGATTGGGTGTGCCANACCCTATGGAGTGTTTACATGGGATACAAATTCCGCCATTTTTGTCAAAGACTTTCGATTTGGTTGAGGACCCTTTATTGGATTCGATTATTTCTTGGGGTAGAAATGGAGAAAGCTTTGTAGTTTGGGATCCAAGTGGAGTTTTCAAGATTGGTTCTTCCTAGGAATCTCAAGCACAGCAATTTCTCCAGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E207379" ref_strand="+" ref_description="SGN-E207379 [cLEC-36-E8]">
      <seq>agagttgtttacaggagatatttcttggtttgtatgtcggcgttacctatataaacctcccttcaaccccttttaccgactttttatctatcacccttatcgaaattttgaatcttttgatcacaaaaactattaaagtttcaatctttgatccataaaaaccacaaatctctttgtatgatatgaacccatttgataaaaaacaagaatctgatactgatacaaaaaccccatttttgactgaaatggactctgaatttgctgcgttttcaccaatttcactcccttttgctgacccatcttctccttttatcaattttggatcttttgccactcctttgagccaacatccagttggagaaggggaaggagaaggagaagggggagaaattgaacagccagctgagggaggattgggtgtgccgcagcctatggagtgtttacatgggatacaaattgcgccatttttgtcaaagactttagatttggttgaggaccctttattggatacgactatttcttggggtagaaatggagaaagctttgtagtttgggatccagtggagttttcaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="55445" stop="54272"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55145" g_stop="54572" g_length="574"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="574" r_length="574" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E207379" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E207379" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55145" e_stop="54572"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGTTGTTTACAGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTCAACCCCTTTTACCGACTTTTTATCTATCACCCTTATCGAAATTTTGAATCTTTTGATCACAAAAACTATTAAAGTTTCAATCTTTGATCCATAAAAACCACAAATCTCTTTGTATGATATGAACCCATTTGATAAAAAACAAGAATCTGATACTGATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACATCCAGTTGGAGAAGGGGAAGGAGAAGGAGAAGGGGGAGAAATTGAACAGCCAGCTGAGGGAGGATTGGGTGTGCCGCAGCCTATGGAGTGTTTACATGGGATACAAATTCCGCCATTTTTGTCAAAGACTTTTGATTTGGTTGAGGACCCTTTATTGGATACGATTATTTCTTGGGGTAGAAATGGAGAAAGCTTTGTAGTTTGGGATCCAGTGGAGTTTTCAAG</genome_strand>
        <mrna_strand>AGAGTTGTTTACAGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTCAACCCCTTTTACCGACTTTTTATCTATCACCCTTATCGAAATTTTGAATCTTTTGATCACAAAAACTATTAAAGTTTCAATCTTTGATCCATAAAAACCACAAATCTCTTTGTATGATATGAACCCATTTGATAAAAAACAAGAATCTGATACTGATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACATCCAGTTGGAGAAGGGGAAGGAGAAGGAGAAGGGGGAGAAATTGAACAGCCAGCTGAGGGAGGATTGGGTGTGCCGCAGCCTATGGAGTGTTTACATGGGATACAAATTGCGCCATTTTTGTCAAAGACTTTAGATTTGGTTGAGGACCCTTTATTGGATACGACTATTTCTTGGGGTAGAAATGGAGAAAGCTTTGTAGTTTGGGATCCAGTGGAGTTTTCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E212690" ref_strand="+" ref_description="SGN-E212690 [cLEC-73-I14]">
      <seq>agagttgtttacaggagatatttcttggtttgtatgtcggcgttacctatataaacctcccttcaaccccttttaccgactttttatctatcacccttatcgaaattttgaatcttttgatcacaaaaactattaaagtttcaatctttgatccataaaaaccacaaatctctttgtatgatatgaacccatttgataaaaaacaagaatctgatactgatacaaaaaccccatttttgactgaaatggactctgaatttgctgcgttttcaccaatttcactcccttttgctgacccatcttctccttttatcaattttggatcttttgccactcctttgagccaacatccagttggagaaggggaaggagaaggagaagggggagaaattgaacagccagctgagggaggattgggtgtgccgcagcctatggagtgtttacatgggatacaaattccgccatttttgtcaaagacttttgatttggttganggacctttattggatacgattatttcttggggtagaaatggagaaagctttgtagtttgggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="55445" stop="54289"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55145" g_stop="54589" g_length="557"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="557" r_length="557" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E212690" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E212690" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55145" e_stop="54589"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGTTGTTTACAGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTCAACCCCTTTTACCGACTTTTTATCTATCACCCTTATCGAAATTTTGAATCTTTTGATCACAAAAACTATTAAAGTTTCAATCTTTGATCCATAAAAACCACAAATCTCTTTGTATGATATGAACCCATTTGATAAAAAACAAGAATCTGATACTGATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACATCCAGTTGGAGAAGGGGAAGGAGAAGGAGAAGGGGGAGAAATTGAACAGCCAGCTGAGGGAGGATTGGGTGTGCCGCAGCCTATGGAGTGTTTACATGGGATACAAATTCCGCCATTTTTGTCAAAGACTTTTGATTTGGTTGAGGACCCTTTATTGGATACGATTATTTCTTGGGGTAGAAATGGAGAAAGCTTTGTAGTTTGGGAT</genome_strand>
        <mrna_strand>AGAGTTGTTTACAGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTCAACCCCTTTTACCGACTTTTTATCTATCACCCTTATCGAAATTTTGAATCTTTTGATCACAAAAACTATTAAAGTTTCAATCTTTGATCCATAAAAACCACAAATCTCTTTGTATGATATGAACCCATTTGATAAAAAACAAGAATCTGATACTGATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACATCCAGTTGGAGAAGGGGAAGGAGAAGGAGAAGGGGGAGAAATTGAACAGCCAGCTGAGGGAGGATTGGGTGTGCCGCAGCCTATGGAGTGTTTACATGGGATACAAATTCCGCCATTTTTGTCAAAGACTTTTGATTTGGTTGANGGACCTTTATTGGATACGATTATTTCTTGGGGTAGAAATGGAGAAAGCTTTGTAGTTTGGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E412321" ref_strand="+" ref_description="SGN-E412321 [STM-16-G19]">
      <seq>aaaaaattaaaatggagcttcaagagaaaaactccaccgactttacacagttgttttcaggagatatttcttggtttgtatgtcggcgttacctatataaacctcccttaaacccccttttaccggcttattatcaaacacccttttcgaaattttcaatcttttgatccaaaaaaactataaagtttcaatctttgatccataaaaccacaaatctctttgtatcatatgaacccatttgataaaaaacaagaatctgatactaatacaaaaaccccctttttgactgaaatggactctgaatttgctgcgttttcaccaatttcactcccttttgctgacccatcttctccttttatcaattttggatcttttgccactcctttgagccaacacccagttggagatggagatggagatggagaaggagaaggaggagaaattgaacagccagctgaggaaggattgggtgtgccacaccctatggagtgtttacatgggatacaaattccgccatttttgtcaaagacttttgatttggttgaggaccctttattggattcgattatttcttggggtagaaatggagaaagctttgtagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="55491" stop="54295"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55191" g_stop="54595" g_length="597"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="603" r_length="603" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E412321" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>597</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E412321" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55191" e_stop="54595"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAATTAAAATGGAGCTTCAGGAGAAAAACTCCACCGACTTTACAGAGTTGTTTACAGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTCAA-CCCCTTTTACCGACTTTTTATCTATCACCCTTATCGAAATTTTGAATCTTTTGAT-CACAAAAACTATTAAAGTTTCAATCTTTGATCCATAAAAACCACAAATCTCTTTGTATGATATGAACCCATTTGATAAAAAACAAGAATCTGATACTGATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACATCCAGTTGGAGA---AG--GG-GAAGGAGAAGGAGAAGGGGGAGAAATTGAACAGCCAGCTGAGGGAGGATTGGGTGTGCCGCAGCCTATGGAGTGTTTACATGGGATACAAATTCCGCCATTTTTGTCAAAGACTTTTGATTTGGTTGAGGACCCTTTATTGGATACGATTATTTCTTGGGGTAGAAATGGAGAAAGCTTTGTAGTT</genome_strand>
        <mrna_strand>AAAAAATTAAAATGGAGCTTCAAGAGAAAAACTCCACCGACTTTACACAGTTGTTTTCAGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTAAACCCCCTTTTACCGGCTTATTATCAAACACCCTTTTCGAAATTTTCAATCTTTTGATCCAAAAAAACTA-TAAAGTTTCAATCTTTGATCCAT-AAAACCACAAATCTCTTTGTATCATATGAACCCATTTGATAAAAAACAAGAATCTGATACTAATACAAAAACCCCCTTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACACCCAGTTGGAGATGGAGATGGAGATGGAGAAGGAGAAGGAGGAGAAATTGAACAGCCAGCTGAGGAAGGATTGGGTGTGCCACACCCTATGGAGTGTTTACATGGGATACAAATTCCGCCATTTTTGTCAAAGACTTTTGATTTGGTTGAGGACCCTTTATTGGATTCGATTATTTCTTGGGGTAGAAATGGAGAAAGCTTTGTAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E729398" ref_strand="+" ref_description="SGN-E729398 [LA20DG08]">
      <seq>taaaatggagcttcaggagaaaaactccaccgactttacagagttgtttacaggagatatttcttggtttgtatgtcggcgttacctatataaacctcccttcaaccccttttaccgactttttatctatcacccttatcgaaattttgaatcttttgatcacaaaaactattaaagtttcaatctttgatccaaaaaaaccacaaatctctttgtatgatatgaacccatttgataaaaaacaagaatctgatactgatacaaaaaccccatttttgactgaaatggactctgaatttgctgcgttttcaccaatttcactcccttttgctgacccatcttctccttttatcaattttggatcttttgccactcctttgagccaacatccagttggagaaggggaaggagaaggagaagggggagaaattgaacagccagctgagggaggattgggtgtgccgcagcctatggagtgtttacatgggatacaaattccgccatttttgtcaaagacttttgatttggttgaggaccct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="55484" stop="54346"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55184" g_stop="54646" g_length="539"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="539" r_length="539" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E729398" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>539</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E729398" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55184" e_stop="54646"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATGGAGCTTCAGGAGAAAAACTCCACCGACTTTACAGAGTTGTTTACAGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTCAACCCCTTTTACCGACTTTTTATCTATCACCCTTATCGAAATTTTGAATCTTTTGATCACAAAAACTATTAAAGTTTCAATCTTTGATCCATAAAAACCACAAATCTCTTTGTATGATATGAACCCATTTGATAAAAAACAAGAATCTGATACTGATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACATCCAGTTGGAGAAGGGGAAGGAGAAGGAGAAGGGGGAGAAATTGAACAGCCAGCTGAGGGAGGATTGGGTGTGCCGCAGCCTATGGAGTGTTTACATGGGATACAAATTCCGCCATTTTTGTCAAAGACTTTTGATTTGGTTGAGGACCCT</genome_strand>
        <mrna_strand>TAAAATGGAGCTTCAGGAGAAAAACTCCACCGACTTTACAGAGTTGTTTACAGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTCAACCCCTTTTACCGACTTTTTATCTATCACCCTTATCGAAATTTTGAATCTTTTGATCACAAAAACTATTAAAGTTTCAATCTTTGATCCAAAAAAACCACAAATCTCTTTGTATGATATGAACCCATTTGATAAAAAACAAGAATCTGATACTGATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACATCCAGTTGGAGAAGGGGAAGGAGAAGGAGAAGGGGGAGAAATTGAACAGCCAGCTGAGGGAGGATTGGGTGTGCCGCAGCCTATGGAGTGTTTACATGGGATACAAATTCCGCCATTTTTGTCAAAGACTTTTGATTTGGTTGAGGACCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E476857" ref_strand="+" ref_description="SGN-E476857 [cSTB-46-K19]">
      <seq>gtttcctcataaatctttttcattttccagaaaaccatacaagaataaaaaaaaaataattaaaatggagcttcaagagaaaaactccaccgactttacacagttgttttcaggagatatttcttggtttgtatgtcggcgttacctatataaacctcccttaaaccccctcttaccgacttattatcaaacacccttttcggaattttcaatcttttgatccaaaaaaactataaagtttcaatctttgatccataaaaccacaaatctctttgtatcatatgaacccatttgataaaaaacaagaatctgatactaatacaaaaaacccctttttgactgaaatggactctgaatttgctgcgttttcaccaatttcactcccttttgctgacccatcttctccttttatcaattttggatcttttgccactcctttgagccaacagcctgttggagaaggaggagaaattgaacagctagctgaggaaggattgggtgtgccacaccctatggagtgtttacatgggatacaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="55516" stop="54390"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55249" g_stop="54690" g_length="560"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="537" r_length="537" r_score="0.902"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E476857" ref_strand="+">
        <total_alignment_score>0.902</total_alignment_score>
        <cumulative_length_of_scored_exons>560</cumulative_length_of_scored_exons>
        <coverage percentage="1.043" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E476857" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55249" e_stop="54690"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCCTCATAAATCCTTTTCATTTTCCAG-AAACCATACAAGAATCCAAAAAAAAAATAAAAAATTAAAATGGAGCTTCAGGAGAAAAACTCCACCGACTTTACAGAGTTGTTTACAGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTCAA-CCCCTTTTACCGACTTTTTATCTATCACCCTTATCGAAATTTTGAATCTTTTGAT-CACAAAAACTATTAAAGTTTCAATCTTTGATCCATAAAAACCACAAATCTCTTTGTATGATATGAACCCATTTGATAAAAAACAAGAATCTGATACTGATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACATCCAGTTGGAGAAGGGGAAGGAGAAGGAGAAGGGGGAGAAATTGAACAGCCAGCTGAGGGAGGATTGGGTGTGCCGCAGCCTATGGAGTGTTTACATGGGATACAAA</genome_strand>
        <mrna_strand>GTTTCCTCATAAATCTTTTTCATTTTCCAGAAAACCATACAAGAAT--AAAAAAAAAAT----AATTAAAATGGAGCTTCAAGAGAAAAACTCCACCGACTTTACACAGTTGTTTTCAGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTAAACCCCCTCTTACCGACTTATTATCAAACACCCTTTTCGGAATTTTCAATCTTTTGATCCAAAAAAACTA-TAAAGTTTCAATCTTTGATCCAT-AAAACCACAAATCTCTTTGTATCATATGAACCCATTTGATAAAAAACAAGAATCTGATACTAATACAAAAAACCCCTTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACAGCCTGTT------------GGAGAA-G-G-A---GGAGAAATTGAACAGCTAGCTGAGGAAGGATTGGGTGTGCCACACCCTATGGAGTGTTTACATGGGATACAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E207378" ref_strand="+" ref_description="SGN-E207378 [cLEC-36-E6]">
      <seq>agagttgtttacaggagatatttcttggtttgtatgtcggcgttacctatataaacctcccttcaaccccttttaccgactttttatctatcacccttatcgaaattttgaatcttttgatcacaaaaactattaaagtttcaatctttgatccataaaaaccacaaatctctttgtatgatatgaacccatttgataaaaaacaagaatctgatactgatacaaaaaccccatttttgactgaaatggactctgaatttgctgcgttttcaccaatttcactcccttttgctgacccatcttctccttttatcaattttggatcttttgccactcctttgagccaacatccagttggagaaggggaaggagaaggagaagggggagaaattgaacagccagctgagggaggattgggtgtgccgcagcctatggagtgtttacatgggatacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="55445" stop="54391"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55145" g_stop="54691" g_length="455"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="455" r_length="455" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E207378" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>455</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E207378" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55145" e_stop="54691"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGTTGTTTACAGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTCAACCCCTTTTACCGACTTTTTATCTATCACCCTTATCGAAATTTTGAATCTTTTGATCACAAAAACTATTAAAGTTTCAATCTTTGATCCATAAAAACCACAAATCTCTTTGTATGATATGAACCCATTTGATAAAAAACAAGAATCTGATACTGATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACATCCAGTTGGAGAAGGGGAAGGAGAAGGAGAAGGGGGAGAAATTGAACAGCCAGCTGAGGGAGGATTGGGTGTGCCGCAGCCTATGGAGTGTTTACATGGGATACAA</genome_strand>
        <mrna_strand>AGAGTTGTTTACAGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTCAACCCCTTTTACCGACTTTTTATCTATCACCCTTATCGAAATTTTGAATCTTTTGATCACAAAAACTATTAAAGTTTCAATCTTTGATCCATAAAAACCACAAATCTCTTTGTATGATATGAACCCATTTGATAAAAAACAAGAATCTGATACTGATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACATCCAGTTGGAGAAGGGGAAGGAGAAGGAGAAGGGGGAGAAATTGAACAGCCAGCTGAGGGAGGATTGGGTGTGCCGCAGCCTATGGAGTGTTTACATGGGATACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E470396" ref_strand="+" ref_description="SGN-E470396 [cSTB-18-G5]">
      <seq>aaaaaattaaaatggagcttcaagagaaaaactccaccgactttacacagttgttttcaggagatatttcttggtttgtatgtcggcgttacctatataaacctcccttaaacccccttttaccggcttattatcaaacacccttttcgaaattttcaatcttttgatccaaaaaaactataaagtttcaatctttgatccataaaaccacaaatctctttgtatcatatgaacccatttgataaaaaacaagaatctgatactaatacaaaaaccccctttttgactgaaatggactctgaatttgctgcgttttcaccaatttcactcccttttgctgacccatcttctccttttatcaattttggatcttttgccactcctttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="55491" stop="54504"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55191" g_stop="54804" g_length="388"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="388" r_length="388" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E470396" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>388</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E470396" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55191" e_stop="54804"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAATTAAAATGGAGCTTCAGGAGAAAAACTCCACCGACTTTACAGAGTTGTTTACAGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTCAA-CCCCTTTTACCGACTTTTTATCTATCACCCTTATCGAAATTTTGAATCTTTTGAT-CACAAAAACTATTAAAGTTTCAATCTTTGATCCATAAAAACCACAAATCTCTTTGTATGATATGAACCCATTTGATAAAAAACAAGAATCTGATACTGATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGA</genome_strand>
        <mrna_strand>AAAAAATTAAAATGGAGCTTCAAGAGAAAAACTCCACCGACTTTACACAGTTGTTTTCAGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTAAACCCCCTTTTACCGGCTTATTATCAAACACCCTTTTCGAAATTTTCAATCTTTTGATCCAAAAAAACTA-TAAAGTTTCAATCTTTGATCCAT-AAAACCACAAATCTCTTTGTATCATATGAACCCATTTGATAAAAAACAAGAATCTGATACTAATACAAAAACCCCCTTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E472153" ref_strand="+" ref_description="SGN-E472153 [cSTB-27-B10]">
      <seq>aaaaaattaaaaaaattaaaatggagcttcaagagaaaaactccaccgactttacacagttgttttcaggagaatatttcttggtttgtatgtcggcgttacctatataaacctcccttaaaccccctcttaccgacttattatcaaacacccttttcgaaattttcaatcttttgatccaaaaaaactataaagtttcaatctttgatccataaaaccacaaatctctttgtatcatatgaacccatttgataaaaaacaagaatctgatactaatacaaaaatcccctttttgactgaaatggactctgaatttgctgcgttttcaccaatttcactcccttttgctgacccatcttctccttttatcaattttggatctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="55499" stop="54519"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55200" g_stop="54819" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="383" r_length="383" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E472153" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>382</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E472153" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55200" e_stop="54819"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAAATAAAAAATTAAAATGGAGCTTCAGGAGAAAAACTCCACCGACTTTACAGAGTTGTTTACAGGAG-ATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTCAA-CCCCTTTTACCGACTTTTTATCTATCACCCTTATCGAAATTTTGAATCTTTTGAT-CACAAAAACTATTAAAGTTTCAATCTTTGATCCATAAAAACCACAAATCTCTTTGTATGATATGAACCCATTTGATAAAAAACAAGAATCTGATACTGATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTT</genome_strand>
        <mrna_strand>AAAAAATTAAAAAAATTAAAATGGAGCTTCAAGAGAAAAACTCCACCGACTTTACACAGTTGTTTTCAGGAGAATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTAAACCCCCTCTTACCGACTTATTATCAAACACCCTTTTCGAAATTTTCAATCTTTTGATCCAAAAAAACTA-TAAAGTTTCAATCTTTGATCCAT-AAAACCACAAATCTCTTTGTATCATATGAACCCATTTGATAAAAAACAAGAATCTGATACTAATACAAAAATCCCCTTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E358676" ref_strand="+" ref_description="SGN-E358676 [cLHT-22-L3]">
      <seq>aagaatcttaaaaattaaaaaaaaattaaaaatggagcttcaggagaaaaactccaccgactttacagagttgtttacaggagatatttcttggtttgtatgtcggcgttacctatataaacctcccttcaaccccttttaccgactttttatcattcacccttatcgaaattttcaatcttttgatcacaaaaactattaaagtttcgatctttgatccataaaaccacaaatctctttgtatgatatgaacccatttgataaaaaacaagaatctgatactgaatcaaaaaccccatttttgactgaaatggactctgaatttgctgcgttttcaccaatttcactcccttttacttgacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="55502" stop="54549"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55210" g_stop="54849" g_length="362"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="363" r_length="363" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E358676" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>362</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E358676" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55210" e_stop="54849"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAATCCAAAAAAAAAATAAAAAATT-AAAATGGAGCTTCAGGAGAAAAACTCCACCGACTTTACAGAGTTGTTTACAGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTCAACCCCTTTTACCGACTTTTTATCTATCACCCTTATCGAAATTTTGAATCTTTTGATCACAAAAACTATTAAAGTTTCAATCTTTGATCCATAAAAACCACAAATCTCTTTGTATGATATGAACCCATTTGATAAAAAACAAGAATCTGATACTGATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGC-TGACC</genome_strand>
        <mrna_strand>AAGAATCTTAAAAATTAAAAAAAAATTAAAAATGGAGCTTCAGGAGAAAAACTCCACCGACTTTACAGAGTTGTTTACAGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTCAACCCCTTTTACCGACTTTTTATCATTCACCCTTATCGAAATTTTCAATCTTTTGATCACAAAAACTATTAAAGTTTCGATCTTTGATCCAT-AAAACCACAAATCTCTTTGTATGATATGAACCCATTTGATAAAAAACAAGAATCTGATACTGAATCAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTACTTGACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E472157" ref_strand="+" ref_description="SGN-E472157 [cSTB-27-B20]">
      <seq>aggagatatttcttggtttgggtgtcggcgttacctatataaacctcccttaaaccccctcttaccgacttattatcaaacacccttttcgaaattttcaatcttttgatccaaaaaaactataaagtttcaatctttgatccataaaaccacaaatctctttgtatcatatgaacccatttgataaaaaacaagaatctgatactaatacaaaaatcccctttttgactgaaatggactctgaatttgctgcgttttcaccaatttcactccctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="55433" stop="54556"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55133" g_stop="54856" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="278" r_length="278" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E472157" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>278</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E472157" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55133" e_stop="54856"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTCAA-CCCCTTTTACCGACTTTTTATCTATCACCCTTATCGAAATTTTGAATCTTTTGAT-CACAAAAACTATTAAAGTTTCAATCTTTGATCCATAAAAACCACAAATCTCTTTGTATGATATGAACCCATTTGATAAAAAACAAGAATCTGATACTGATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTT</genome_strand>
        <mrna_strand>AGGAGATATTTCTTGGTTTGGGTGTCGGCGTTACCTATATAAACCTCCCTTAAACCCCCTCTTACCGACTTATTATCAAACACCCTTTTCGAAATTTTCAATCTTTTGATCCAAAAAAACTA-TAAAGTTTCAATCTTTGATCCAT-AAAACCACAAATCTCTTTGTATCATATGAACCCATTTGATAAAAAACAAGAATCTGATACTAATACAAAAATCCCCTTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E717627" ref_strand="+" ref_description="SGN-E717627 [FC02BB03]">
      <seq>gggcgattggcggcaaatcggccgaattgatatatataggagctacacttttacccaaatcaatcaaaaaccctatctcctattccaatttacagctgaaaatccccaattgaagctcacaatttcagttctgtatatatataacgatcagatttagtctctttgattcgagttgttcttgaaatttacatgaaattagtaataagcagtgattttgttgtttgttttgattttgcgttttttttaatagcaattttggatgtaaccgatgtaaaatagtttgaatttagggttagttttttcttttattatttgatgattgtttggataaagtgatggaaatggagggttctcgtagaccatttgatagatcaagattggagccaggacctaagaaaccaagattagtcgaagccccaattggaactgagcgaggttctaatgggagaagctttattcctcaacggggagctgggaattcgaggattcgagctagtgataaagggggagactcggaaaacagtgattcgattcgcgggtcttttcaacagcagacgcagcatcaggagctagtgagtcaatataagacggctttagctgaactaacatttaattcaaagccgataattacaaacttgactattattgctggtgagaatttgcaagcggccaaggcaattgctgctactatctgcaacaacattattgaggtgatattccggttttaaatgctactgtgtcaatgttgttgattttgtttaatttagtgtgttttattacttggttgtacagaagtgaaatctgataaagaaggcaaagttagatttatgatattttagattagtgcagctggtgtaatgagtgttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="61118" stop="62556"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61418" g_stop="62256" g_length="839"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="868" r_length="839" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E717627" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>839</cumulative_length_of_scored_exons>
        <coverage percentage="0.967" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E717627" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61418" e_stop="62256"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATATATAGGAGCTACACTTTTACCCAAATCAATCAAAAACCCTATCTCCTATTCCAATTTACAGCTGAAAATCCCCAATTGAAGCTCACAATTTCAGTTCTGTATATATATAACGATCAGATTTAGTCTCTTTGATTCGAGTTGTTCTTGAAATTTACATGAAATTAGTAATAAGCAGTGATTTTGTTGTTTGTTTTGATTTTGCGTTTTTTTTAATAGCAATTTTGGATGTAACCGATGTAAAATAGTTTGAATTTAGGGTTAGTTTTTTCTTTTATTATTTGATGATTGTTTGGATAAAGTGATGGAAATGGAGGGTTCTCGTAGACCATTTGATAGATCAAGATTGGAGCCAGGACCTAAGAAACCAAGATTAGTCGAAGCCCCAATTGGAACTGAGCGAGGTTCTAATGGGAGAAGCTTTATTCCTCAACGGGGAGCTGGGAATTCGAGGATTCGAGCTAGTGATAAAGGGGGAGACTCGGAAAACAGTGATTCGATTCGCGGGTCTTTTCAACAGCAGACGCAGCATCAGGAGCTAGTGAGTCAATATAAGACGGCTTTAGCTGAACTAACATTTAATTCAAAGCCGATAATTACAAACTTGACTATTATTGCTGGTGAGAATTTGCAAGCGGCCAAGGCAATTGCTGCTACTATCTGCAACAACATTATTGAGGTGATATTCCGGTTTTAAATGCTACTGTGTCAATGTTGTTGATTTTGTTTAATTTAGTGTGTTTTATTACTTGGTTGTACAGAAGTGAAATCTGATAAAGAAGGCAAAGTTAGATTTATGATATTTTAGATTAGTGCAGCTGGTGTAATGAGTGTTGT</genome_strand>
        <mrna_strand>ATATATATAGGAGCTACACTTTTACCCAAATCAATCAAAAACCCTATCTCCTATTCCAATTTACAGCTGAAAATCCCCAATTGAAGCTCACAATTTCAGTTCTGTATATATATAACGATCAGATTTAGTCTCTTTGATTCGAGTTGTTCTTGAAATTTACATGAAATTAGTAATAAGCAGTGATTTTGTTGTTTGTTTTGATTTTGCGTTTTTTTTAATAGCAATTTTGGATGTAACCGATGTAAAATAGTTTGAATTTAGGGTTAGTTTTTTCTTTTATTATTTGATGATTGTTTGGATAAAGTGATGGAAATGGAGGGTTCTCGTAGACCATTTGATAGATCAAGATTGGAGCCAGGACCTAAGAAACCAAGATTAGTCGAAGCCCCAATTGGAACTGAGCGAGGTTCTAATGGGAGAAGCTTTATTCCTCAACGGGGAGCTGGGAATTCGAGGATTCGAGCTAGTGATAAAGGGGGAGACTCGGAAAACAGTGATTCGATTCGCGGGTCTTTTCAACAGCAGACGCAGCATCAGGAGCTAGTGAGTCAATATAAGACGGCTTTAGCTGAACTAACATTTAATTCAAAGCCGATAATTACAAACTTGACTATTATTGCTGGTGAGAATTTGCAAGCGGCCAAGGCAATTGCTGCTACTATCTGCAACAACATTATTGAGGTGATATTCCGGTTTTAAATGCTACTGTGTCAATGTTGTTGATTTTGTTTAATTTAGTGTGTTTTATTACTTGGTTGTACAGAAGTGAAATCTGATAAAGAAGGCAAAGTTAGATTTATGATATTTTAGATTAGTGCAGCTGGTGTAATGAGTGTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E203123" ref_strand="+" ref_description="SGN-E203123 [cLEB-3-P13]">
      <seq>gcacgagggaacgcaaaatattgggccgatgaatgcaactctggaatccaggggatccatagtgcaacagggagagactctcagagctgcctctccctctgctcagtcaccaatgcatcaccttcctccatccccatcacttataacaagcaacagtaatcaagtaattaacagtcccgctgagcagtaccagatgcaaaccagttctcgttctgatccaagactatcccaaatctcaaggaggtcaaatctagatcctcgtaaccagtatgcccaggaatctctgacaatgccatctcggaataccatttcagttaattcacaaagacaacaccctccaagtttgcagaattcgtctgccttgtcttcttctcatcaagtgagacagaaaggttcaccggaaaagcctgtaatctgaatattctgtacaaaccaagaattcaacagttcctgagatttcaggttttcctgatccctctagcactagcagtttgttggctgctgttttgaagagtggagtcattggtaataaatcgagttctggtactacgtcaagttctcttgataagggtgctctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="66594" stop="67769"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66893" g_stop="67469" g_length="577"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="578" r_length="578" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E203123" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>577</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E203123" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66893" e_stop="67469"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATGTTGGAACGCAAAATATTGGGCCGATGAATGCAACTCTGGAATCCAGGGGATCCATAGTGCAACAGGGAGAGACTCTCAGAGCTGCCTCTCCCTCTGCTCAGTCACCAATGCATCACCTTCCTCCATCCCCATCACTTATAACAAGCAACAGTAATCAAGTAATTAACAGTCCCGCTGAGCAGTACCAGATGCAAACCAGTTCTCGTTCTGATCCAAGACTATCCCAAATCTCAAGGAGGTCAAATCTAGATCCTCGTAACCAGTATGCCCAGGAATCTCTGACAATGCCATCTCGGAATACCATTTCAGTTAATTCACAAAGACAACACCCTCCAAGTTTGCAGAATTCGTCTGCCTTGTCTTCTTCTCATCAGTTGAGACAG-AAGGTTCAGCGGGAAAGCCTGGAATCTGAATATTCTGTACAAACCAAGAATTCAACAGTTCCTGAGATTTCAGGTTTTCCTGATCCCTCTAGCACTAGCAGTTTGTTGGCTGCTGTTTTGAAGAGTGGAGTCATTGGTAATAAATCGAGTTCTGGTACTACGTCAAGTTCTCTTGATAAGGGTGCTCTC</genome_strand>
        <mrna_strand>GCACGAGGGAACGCAAAATATTGGGCCGATGAATGCAACTCTGGAATCCAGGGGATCCATAGTGCAACAGGGAGAGACTCTCAGAGCTGCCTCTCCCTCTGCTCAGTCACCAATGCATCACCTTCCTCCATCCCCATCACTTATAACAAGCAACAGTAATCAAGTAATTAACAGTCCCGCTGAGCAGTACCAGATGCAAACCAGTTCTCGTTCTGATCCAAGACTATCCCAAATCTCAAGGAGGTCAAATCTAGATCCTCGTAACCAGTATGCCCAGGAATCTCTGACAATGCCATCTCGGAATACCATTTCAGTTAATTCACAAAGACAACACCCTCCAAGTTTGCAGAATTCGTCTGCCTTGTCTTCTTCTCATCAAGTGAGACAGAAAGGTTCACCGGAAAAGCCTGTAATCTGAATATTCTGTACAAACCAAGAATTCAACAGTTCCTGAGATTTCAGGTTTTCCTGATCCCTCTAGCACTAGCAGTTTGTTGGCTGCTGTTTTGAAGAGTGGAGTCATTGGTAATAAATCGAGTTCTGGTACTACGTCAAGTTCTCTTGATAAGGGTGCTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E203430" ref_strand="+" ref_description="SGN-E203430 [cLEB-3-P12]">
      <seq>gcacgagggaacgcaaaatattgggccgatgaatgcaactctggaatccaggggatccatagtgcaacagggagagactctcagagctgcctctccctctgctcagtcaccaatgcatcaccttcctccatccccatcacttataacaagcaacagtaatcaagtaattaacagtcccgctgagcagtaccagatgcaaaccagttctcgttctgatccaagactatcccaaatctcaaggaggtcaaatctagatcctcgtaaccagtatgcccaggaatctctgacaatgccatctcggaataccatttcagttaattcacaaagacaacaccctccaagtttgcagaattcgtctgccttgtcttcttctcatcagttgagacagaaggttcagcgggaaagcctggaatctgaatattctgtacaaaccaagaattcaacagttcctgagatttcaggttttcctgatccctctagcactagcagtttgttggctgctgttttgaagagtggagtcattgggaataaatcgagttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="66594" stop="67733"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66893" g_stop="67433" g_length="541"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="541" r_length="541" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E203430" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>541</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E203430" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66893" e_stop="67433"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATGTTGGAACGCAAAATATTGGGCCGATGAATGCAACTCTGGAATCCAGGGGATCCATAGTGCAACAGGGAGAGACTCTCAGAGCTGCCTCTCCCTCTGCTCAGTCACCAATGCATCACCTTCCTCCATCCCCATCACTTATAACAAGCAACAGTAATCAAGTAATTAACAGTCCCGCTGAGCAGTACCAGATGCAAACCAGTTCTCGTTCTGATCCAAGACTATCCCAAATCTCAAGGAGGTCAAATCTAGATCCTCGTAACCAGTATGCCCAGGAATCTCTGACAATGCCATCTCGGAATACCATTTCAGTTAATTCACAAAGACAACACCCTCCAAGTTTGCAGAATTCGTCTGCCTTGTCTTCTTCTCATCAGTTGAGACAGAAGGTTCAGCGGGAAAGCCTGGAATCTGAATATTCTGTACAAACCAAGAATTCAACAGTTCCTGAGATTTCAGGTTTTCCTGATCCCTCTAGCACTAGCAGTTTGTTGGCTGCTGTTTTGAAGAGTGGAGTCATTGGTAATAAATCGAGTTCT</genome_strand>
        <mrna_strand>GCACGAGGGAACGCAAAATATTGGGCCGATGAATGCAACTCTGGAATCCAGGGGATCCATAGTGCAACAGGGAGAGACTCTCAGAGCTGCCTCTCCCTCTGCTCAGTCACCAATGCATCACCTTCCTCCATCCCCATCACTTATAACAAGCAACAGTAATCAAGTAATTAACAGTCCCGCTGAGCAGTACCAGATGCAAACCAGTTCTCGTTCTGATCCAAGACTATCCCAAATCTCAAGGAGGTCAAATCTAGATCCTCGTAACCAGTATGCCCAGGAATCTCTGACAATGCCATCTCGGAATACCATTTCAGTTAATTCACAAAGACAACACCCTCCAAGTTTGCAGAATTCGTCTGCCTTGTCTTCTTCTCATCAGTTGAGACAGAAGGTTCAGCGGGAAAGCCTGGAATCTGAATATTCTGTACAAACCAAGAATTCAACAGTTCCTGAGATTTCAGGTTTTCCTGATCCCTCTAGCACTAGCAGTTTGTTGGCTGCTGTTTTGAAGAGTGGAGTCATTGGGAATAAATCGAGTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E277183" ref_strand="+" ref_description="SGN-E277183 [cLEL-3-H24](-)">
      <seq>attctgcaaacttggagggtgttgtctttgtgaattaactgaaatggtattccgagatggcattgtcagagattcctgggcatactggttacgaggatctagatttgacctccttgagatttgggatagtcttggatcagaacgagaactggtttgcatctggtactgctcagcgggactgttaattacttgattactgttgcttgttataagtgatggggatggaggaaggtgatgcattggtgactgagcagagggagaggcagctctgaagatgtctccctgttgcactatggatcccctggattccagagttgcattcatcggcccaatattttgcgttccctcgtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="67544" stop="66594"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67244" g_stop="66893" g_length="352"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="352" r_length="352" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E277183" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>352</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E277183" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67244" e_stop="66893"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCTGCAAACTTGGAGGGTGTTGTCTTTGTGAATTAACTGAAATGGTATTCCGAGATGGCATTGTCAGAGATTCCTGGGCATACTGGTTACGAGGATCTAGATTTGACCTCCTTGAGATTTGGGATAGTCTTGGATCAGAACGAGAACTGGTTTGCATCTGGTACTGCTCAGCGGGACTGTTAATTACTTGATTACTGTTGCTTGTTATAAGTGATGGGGATGGAGGAAGGTGATGCATTGGTGACTGAGCAGAGGGAGAGGCAGCTCTGAGAGTCTCTCCCTGTTGCACTATGGATCCCCTGGATTCCAGAGTTGCATTCATCGGCCCAATATTTTGCGTTCCAACATGG</genome_strand>
        <mrna_strand>ATTCTGCAAACTTGGAGGGTGTTGTCTTTGTGAATTAACTGAAATGGTATTCCGAGATGGCATTGTCAGAGATTCCTGGGCATACTGGTTACGAGGATCTAGATTTGACCTCCTTGAGATTTGGGATAGTCTTGGATCAGAACGAGAACTGGTTTGCATCTGGTACTGCTCAGCGGGACTGTTAATTACTTGATTACTGTTGCTTGTTATAAGTGATGGGGATGGAGGAAGGTGATGCATTGGTGACTGAGCAGAGGGAGAGGCAGCTCTGAAGATGTCTCCCTGTTGCACTATGGATCCCCTGGATTCCAGAGTTGCATTCATCGGCCCAATATTTTGCGTTCCCTCGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E561779" ref_strand="+" ref_description="SGN-E561779 [19114]">
      <seq>ctcttgaataagggtgctgtgtcatcccaagccagtgcacagcctcatcccgctcagtgttccccatctgggcctaggatcccaccggcctccgtcactagtctatcgatggacagaaatgcttcaaatcctccaaattatccccagagaaatgtagaacagccaccattgccaccgtggtctacctcgaactcttgtagggagtgcatcattgcagacgcttaatgcaccaaatactgcttccagtcctctttcaagtattttgagtacattggtggcgaaggggttaatatctgcatcaaagaaagacccacctatttatactccttcggatacacctcctcaaactcagaaccttattccacctgcaagctccatttcaactcctgctttatctgctccaatatctgcatctgttccttcttcagctcctaaggatgaactttctcactcaaaaccttctgctaaaactcctgaggtcttacttcagtccacgaatgaagaggcaaaaagtctcattgggcttgtatttaagccagatgtgattcggaattcccatcctgctgtgatcagtgaccttcttgatgacgttccacatcagtgtggaatatgcggttttggacttaaactccaagagaaacttgatagacacttggagtggcactcattgagaaatccagatgtcaaactgttgaataattcaagaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="67150" stop="68455"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67450" g_stop="68155" g_length="706"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="708" r_length="708" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E561779" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E561779" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67450" e_stop="68155"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTG-ATAAGGGTGCTCTCTCATCCCAAGCCAGTGCACAGCCTCATCCCGCCCAGTTTTCCACATCTGGGCCTAGGATACCGCCGGCCTCTGTCACTAGTCTATCAATGGACAGAAATGCTTCGAACTCTCCAAATTATTCCCAGAGAAATGTAGAACAGCCACCATTGCCACC-TGGTCTGCCTCCAACTCTTGCAGGTACTGCATCATCGCAGACGCCGAATGCACCAAATATTGCTTCCAGTCCTCTTTCAAGTATTTTGAGTACATTGGTGGCGAAGGGGTTAATATCCGCATCAAAGAAGGACCCTCCTATTTATACTCCTTCAGATACACCTCCTCAAACTCAGAACCTTATTCCACCTGCAAGTTCCATTTCAACTCCTGCTTTATCTGCTCCAACATCTTCATCTGTTCCTTCTTCAGCTCATAAGGATGAACTTTCACACTCGAAACCTTCTGCTGAAACTCCTGAGGTCTTACTTCAGTCCATGAAAGAAGAGGCAAAAAGTCTCATTGGGCTTGTATTTAAGCCAGATGTGATTCGGAATTCTCATCCTGCTGTGATCAGTGACCTTGTTGATGATGTTCCACTTCAGTGTGGAATATGCGGTTTTGGATTTAAATTCCAAGTGAAACTTGATAGACACTTGGAATGGCACTCATTGAGAAATCCAGATGTCAAACTGTTGAATAATTCAAGAAA</genome_strand>
        <mrna_strand>CTCTTGAATAAGGGTGCTGTGTCATCCCAAGCCAGTGCACAGCCTCATCCCGCTCAGTGTTCCCCATCTGGGCCTAGGATCCCACCGGCCTCCGTCACTAGTCTATCGATGGACAGAAATGCTTCAAATCCTCCAAATTATCCCCAGAGAAATGTAGAACAGCCACCATTGCCACCGTGGTCTACCTCGAACTCTTGTAGGGAGTGCATCATTGCAGACGCTTAATGCACCAAATACTGCTTCCAGTCCTCTTTCAAGTATTTTGAGTACATTGGTGGCGAAGGGGTTAATATCTGCATCAAAGAAAGACCCACCTATTTATACTCCTTCGGATACACCTCCTCAAACTCAGAACCTTATTCCACCTGCAAGCTCCATTTCAACTCCTGCTTTATCTGCTCCAATATCTGCATCTGTTCCTTCTTCAGCTCCTAAGGATGAACTTTCTCACTCAAAACCTTCTGCTAAAACTCCTGAGGTCTTACTTCAGTCCACGAATGAAGAGGCAAAAAGTCTCATTGGGCTTGTATTTAAGCCAGATGTGATTCGGAATTCCCATCCTGCTGTGATCAGTGACCTTCTTGATGACGTTCCACATCAGTGTGGAATATGCGGTTTTGGACTTAAACTCCAAGAGAAACTTGATAGACACTTGGAGTGGCACTCATTGAGAAATCCAGATGTCAAACTGTTGAATAATTCAAGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E244943" ref_strand="+" ref_description="SGN-E244943 [cLEF-2-O21]">
      <seq>tctgtcactagtctatcaatggacagaaatgcttcgaactctccaaattattcccagagaaatgtagaacagccaccattgccacctggtctgcctccaactcttgcaggtactgcatcatcgcagacgccgaatgcaccaaatattgcttccagtcctctttcaagtattttgagtacattggtggcgaaggggttaatatccgcatcaaagaaggaccctcctatttatactccttcagatacacctcctcaaactcagaaccttattccacctgcaagttccatttcaactcctgctttatctgctccaacatcttcatctgttccttcttcagctcataaggatgaactttcacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="67239" stop="68198"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67539" g_stop="67898" g_length="360"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="360" r_length="360" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E244943" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>360</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E244943" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67539" e_stop="67898"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGTCACTAGTCTATCAATGGACAGAAATGCTTCGAACTCTCCAAATTATTCCCAGAGAAATGTAGAACAGCCACCATTGCCACCTGGTCTGCCTCCAACTCTTGCAGGTACTGCATCATCGCAGACGCCGAATGCACCAAATATTGCTTCCAGTCCTCTTTCAAGTATTTTGAGTACATTGGTGGCGAAGGGGTTAATATCCGCATCAAAGAAGGACCCTCCTATTTATACTCCTTCAGATACACCTCCTCAAACTCAGAACCTTATTCCACCTGCAAGTTCCATTTCAACTCCTGCTTTATCTGCTCCAACATCTTCATCTGTTCCTTCTTCAGCTCATAAGGATGAACTTTCACAC</genome_strand>
        <mrna_strand>TCTGTCACTAGTCTATCAATGGACAGAAATGCTTCGAACTCTCCAAATTATTCCCAGAGAAATGTAGAACAGCCACCATTGCCACCTGGTCTGCCTCCAACTCTTGCAGGTACTGCATCATCGCAGACGCCGAATGCACCAAATATTGCTTCCAGTCCTCTTTCAAGTATTTTGAGTACATTGGTGGCGAAGGGGTTAATATCCGCATCAAAGAAGGACCCTCCTATTTATACTCCTTCAGATACACCTCCTCAAACTCAGAACCTTATTCCACCTGCAAGTTCCATTTCAACTCCTGCTTTATCTGCTCCAACATCTTCATCTGTTCCTTCTTCAGCTCATAAGGATGAACTTTCACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E401966" ref_strand="+" ref_description="SGN-E401966 [PPC-5-J16]">
      <seq>aagccagatgtgattcggaattcccatcctgctgtgatcagtgaccttcttgatgacgttccacatcagtgtggaatatgcggttttggacttaaactccaagagaaacttgatagacacttggagtggcactcattgagaaatccagatgtcaaactgttgaataattcaagaaagtggtatttaaattctggggaatggattgctgcatttggtggcctcccttgtggtgataaatccaaagggccagctggaggttctagtgagacatcagaatgtactgagaccatggttcctgcagatgaatgtcaatgtgtgtgtgttttgtgtggtgagttttttgaagacttctacaatgaagaaagtgacgaatggatgttcaaagatgctgtttacatgagtattcccagtgaaagtgattgtca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="67680" stop="68704"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67980" g_stop="68404" g_length="425"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="425" r_length="425" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E401966" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>425</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E401966" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67980" e_stop="68404"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCCAGATGTGATTCGGAATTCTCATCCTGCTGTGATCAGTGACCTTGTTGATGATGTTCCACTTCAGTGTGGAATATGCGGTTTTGGATTTAAATTCCAAGTGAAACTTGATAGACACTTGGAATGGCACTCATTGAGAAATCCAGATGTCAAACTGTTGAATAATTCAAGAAAGTGGTATTTAAATTCTGGGGAATGGATTGCTGCATTTGGTGGCCTCCCTTGTGGCGATAAATCTGAAGGGCCAGCTGGAGGTTCTAGTGAGACATCAGAATGTACTGAGACCATGGTTCCTGCAGATGAATGTCAATGTGTGTGTGTTTTGTGTGGTGAGTTTTTTGAAGACTTCTACAATGAAGAAAGTGATGAATGGATGTTCAAAGATGCTGTTTACATGAGTATTCCAAGTGAAAGTGATTGTCA</genome_strand>
        <mrna_strand>AAGCCAGATGTGATTCGGAATTCCCATCCTGCTGTGATCAGTGACCTTCTTGATGACGTTCCACATCAGTGTGGAATATGCGGTTTTGGACTTAAACTCCAAGAGAAACTTGATAGACACTTGGAGTGGCACTCATTGAGAAATCCAGATGTCAAACTGTTGAATAATTCAAGAAAGTGGTATTTAAATTCTGGGGAATGGATTGCTGCATTTGGTGGCCTCCCTTGTGGTGATAAATCCAAAGGGCCAGCTGGAGGTTCTAGTGAGACATCAGAATGTACTGAGACCATGGTTCCTGCAGATGAATGTCAATGTGTGTGTGTTTTGTGTGGTGAGTTTTTTGAAGACTTCTACAATGAAGAAAGTGACGAATGGATGTTCAAAGATGCTGTTTACATGAGTATTCCCAGTGAAAGTGATTGTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E432655" ref_strand="+" ref_description="SGN-E432655 [STM-57-I16]">
      <seq>acccagatgtgattcggaattcccatcctgctgtgatcagtgaccttcttgatgacgttccacatcagtgtggaatatgcggttttggacttaaactccaagagaaacttgatagacacttggagtggcactcattgagaaatccagatgtcaaactgttgaataattcaagaaagtggtatttaaattctggggaatggattgctgcatttggtggcctcccttgtggtgataaatccaaagggccagctggaggttctagtgagacatcagaatgtactgagaccatggttcctgcagatgaatgtcaatgtgtgtgtgttttgtgtggtgagttttttgaagacttctacaatgaagaaagtgacgaatggatgttcaaagatgctgtttacatgagtattccaagtgaaagtgattgtcagggtccgatagtccacaagaactgtatttcagaaagttcttgtcaagagttggggcttgcctaggatataaattggtgttggatgcttgatttttgttctgttaatcaaagataaccaggttcattttgaattacttgtaatggttatacatcttgcttagtaagcctcttccatgcttttatttgaaatggaaattctagatactagaacagtttgcgcatcacatcttcctcaatttgatacttactgtccacttacattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="67681" stop="69622"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67981" g_stop="68480" g_length="500"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="499" r_length="499" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68481" i_stop="69120" i_length="640">
            <donor d_prob="0.923" d_score="0.94"/>
            <acceptor a_prob="0.965" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69121" g_stop="69317" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="500" r_stop="683" r_length="184" r_score="0.883"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E432655" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>697</cumulative_length_of_scored_exons>
        <coverage percentage="1.015" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E432655" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67981" e_stop="68480"/>
          <exon e_start="69121" e_stop="69317"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCCAGATGTGATTCGGAATTCTCATCCTGCTGTGATCAGTGACCTTGTTGATGATGTTCCACTTCAGTGTGGAATATGCGGTTTTGGATTTAAATTCCAAGTGAAACTTGATAGACACTTGGAATGGCACTCATTGAGAAATCCAGATGTCAAACTGTTGAATAATTCAAGAAAGTGGTATTTAAATTCTGGGGAATGGATTGCTGCATTTGGTGGCCTCCCTTGTGGCGATAAATCTGAAGGGCCAGCTGGAGGTTCTAGTGAGACATCAGAATGTACTGAGACCATGGTTCCTGCAGATGAATGTCAATGTGTGTGTGTTTTGTGTGGTGAGTTTTTTGAAGACTTCTACAATGAAGAAAGTGATGAATGGATGTTCAAAGATGCTGTTTACATGAGTATTCCAAGTGAAAGTGATTGTCAGGGTCCGATAGTCCACAAGAACTGTATTTCAGAAAGTTCTTGTCAAGAGTTGGGGTTTGCCTAGGATATAAAACTGGTAAGTGATATGATGTTAAAGTTGATTTTAGATATTTTAAATACTTCACTAGATACTAATAATTATGAAAGAAGCCTTTTCATGTGGTTTGCTGGTAAATGGGTGGGATCTGTTTTTCATAGATAAGAATCTGCCATCGATTCTTAATGGAAAAACAAATATGTGGTACTTTTCATTGAAATTTTTCCCCAAATAAACTGAACACAAGTTACTTGTCGGCACCTTGAGTAAATTATGGATCTAATTGTCTGACAGCCCCATTTTGGAGTGCGTTGCTCTTAAGAATTAAATGCTTTTCAGAAGAGAGCACTTCCTAAAGTTCTTAAATTCTCGAAGTGCTTTGAATTCAAATTGGTTTTGTGCTGGCAATAAAATGGTTAGACAAGTTATGCTGCCCGTCAGAATTGTTAGTTGAAACTTTTGGACTGGCAATAAAATGGAGGAAGCTTAACTTTTGAAATACAATTTATGGATGCATTATTCTTTTTGATCTTCTTTTGGACTTGTGTACGTGCTTTTAATCTTGCCATCCTTCGTAGTTTGTAATTTGGTATTTATTCGTTCCTTGCAGTTCCTTTATTTCATTAGTAGCCACTGCTGACTTGTATTGTATCATATTGTCCATGGTTTCATTTCTCAGGTGTTGGATGCTTGATTTTTG-TCTCTTAATCGAAGACAACCAGGTTCATTTTGAATTACTTGTAATGATTATACATCTTCTTGCTTAGTAAGCCTCTTCCATGCTTTTGTTTGAAACGACAATGAAATGGAAATTCTAGATACTAGAACAGTTTGCGCATCATATCTTCCTCAATTTGATACTTTCTGTCCACTTAC</genome_strand>
        <mrna_strand>ACCCAGATGTGATTCGGAATTCCCATCCTGCTGTGATCAGTGACCTTCTTGATGACGTTCCACATCAGTGTGGAATATGCGGTTTTGGACTTAAACTCCAAGAGAAACTTGATAGACACTTGGAGTGGCACTCATTGAGAAATCCAGATGTCAAACTGTTGAATAATTCAAGAAAGTGGTATTTAAATTCTGGGGAATGGATTGCTGCATTTGGTGGCCTCCCTTGTGGTGATAAATCCAAAGGGCCAGCTGGAGGTTCTAGTGAGACATCAGAATGTACTGAGACCATGGTTCCTGCAGATGAATGTCAATGTGTGTGTGTTTTGTGTGGTGAGTTTTTTGAAGACTTCTACAATGAAGAAAGTGACGAATGGATGTTCAAAGATGCTGTTTACATGAGTATTCCAAGTGAAAGTGATTGTCAGGGTCCGATAGTCCACAAGAACTGTATTTCAGAAAGTTCTTGTCAAGAGTTGGGGCTTGCCTAGGATAT-AAATTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTGGATGCTTGATTTTTGTTCTGTTAATCAAAGATAACCAGGTTCATTTTGAATTACTTGTAATGGTTATACA---TCTTGCTTAGTAAGCCTCTTCCATGCTTTT-ATT----------TGAAATGGAAATTCTAGATACTAGAACAGTTTGCGCATCACATCTTCCTCAATTTGATACTTACTGTCCACTTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E203431" ref_strand="+" ref_description="SGN-E203431 [cLEB-3-P12](-)">
      <seq>ctgttgaataattcaagaaagtggtatttaaattctggggaatggattgctgcatttggtggcctcccttgtggcgataaatctgaagggccagctggaggttctagtgagacatcagaatgtactgagaccatggttcctgcagatgaatgtcaatgtgtgtgtgttttgtgtggtgagttttttgaagacttctacaatgaagaaagtgatgaatggatgttcaaagatgctgtttacatgagtattccaagtgaaagtgattgtcagggtccgatagtccacaagaactgtatttcagaaagttcttgtcaagagttggggtttgcctaggatataaaactggtgttggatgcttgatttttgtctcttaatcgaagacaaccaggttcattttgaattacttgtaatgattatacatcttcttgcttagtaagcctcttccatgcttttgtttgaaacgacaatgaaatggaaattctagatactagaacagtttgcgcaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="67836" stop="69579"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68136" g_stop="68480" g_length="345"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="345" r_length="345" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68481" i_stop="69120" i_length="640">
            <donor d_prob="0.923" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69121" g_stop="69283" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="508" r_length="163" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E203431" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>508</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E203431" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68136" e_stop="68480"/>
          <exon e_start="69121" e_stop="69283"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTTGAATAATTCAAGAAAGTGGTATTTAAATTCTGGGGAATGGATTGCTGCATTTGGTGGCCTCCCTTGTGGCGATAAATCTGAAGGGCCAGCTGGAGGTTCTAGTGAGACATCAGAATGTACTGAGACCATGGTTCCTGCAGATGAATGTCAATGTGTGTGTGTTTTGTGTGGTGAGTTTTTTGAAGACTTCTACAATGAAGAAAGTGATGAATGGATGTTCAAAGATGCTGTTTACATGAGTATTCCAAGTGAAAGTGATTGTCAGGGTCCGATAGTCCACAAGAACTGTATTTCAGAAAGTTCTTGTCAAGAGTTGGGGTTTGCCTAGGATATAAAACTGGTAAGTGATATGATGTTAAAGTTGATTTTAGATATTTTAAATACTTCACTAGATACTAATAATTATGAAAGAAGCCTTTTCATGTGGTTTGCTGGTAAATGGGTGGGATCTGTTTTTCATAGATAAGAATCTGCCATCGATTCTTAATGGAAAAACAAATATGTGGTACTTTTCATTGAAATTTTTCCCCAAATAAACTGAACACAAGTTACTTGTCGGCACCTTGAGTAAATTATGGATCTAATTGTCTGACAGCCCCATTTTGGAGTGCGTTGCTCTTAAGAATTAAATGCTTTTCAGAAGAGAGCACTTCCTAAAGTTCTTAAATTCTCGAAGTGCTTTGAATTCAAATTGGTTTTGTGCTGGCAATAAAATGGTTAGACAAGTTATGCTGCCCGTCAGAATTGTTAGTTGAAACTTTTGGACTGGCAATAAAATGGAGGAAGCTTAACTTTTGAAATACAATTTATGGATGCATTATTCTTTTTGATCTTCTTTTGGACTTGTGTACGTGCTTTTAATCTTGCCATCCTTCGTAGTTTGTAATTTGGTATTTATTCGTTCCTTGCAGTTCCTTTATTTCATTAGTAGCCACTGCTGACTTGTATTGTATCATATTGTCCATGGTTTCATTTCTCAGGTGTTGGATGCTTGATTTTTGTCTCTTAATCGAAGACAACCAGGTTCATTTTGAATTACTTGTAATGATTATACATCTTCTTGCTTAGTAAGCCTCTTCCATGCTTTTGTTTGAAACGACAATGAAATGGAAATTCTAGATACTAGAACAGTTTGCGCATCAT</genome_strand>
        <mrna_strand>CTGTTGAATAATTCAAGAAAGTGGTATTTAAATTCTGGGGAATGGATTGCTGCATTTGGTGGCCTCCCTTGTGGCGATAAATCTGAAGGGCCAGCTGGAGGTTCTAGTGAGACATCAGAATGTACTGAGACCATGGTTCCTGCAGATGAATGTCAATGTGTGTGTGTTTTGTGTGGTGAGTTTTTTGAAGACTTCTACAATGAAGAAAGTGATGAATGGATGTTCAAAGATGCTGTTTACATGAGTATTCCAAGTGAAAGTGATTGTCAGGGTCCGATAGTCCACAAGAACTGTATTTCAGAAAGTTCTTGTCAAGAGTTGGGGTTTGCCTAGGATATAAAACTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTGGATGCTTGATTTTTGTCTCTTAATCGAAGACAACCAGGTTCATTTTGAATTACTTGTAATGATTATACATCTTCTTGCTTAGTAAGCCTCTTCCATGCTTTTGTTTGAAACGACAATGAAATGGAAATTCTAGATACTAGAACAGTTTGCGCAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E203124" ref_strand="+" ref_description="SGN-E203124 [cLEB-3-P13](-)">
      <seq>taattcaagaaagtggtatttaaattctggggaatggattgctgcatttggtggcctcccttgtggcgataaatctgaagggccagctggaggttctagtgagacatcagaatgtactgagaccatggttcctgcagatgaatgtcaatgtgtgtgtgttttgtgtggtgagttttttgaagacttctacaatgaagaaagtgatgaatggatgttcaaagatgctgtttacatgagtattccaagtgaaagtgattgtcagggtccgatagtccacaagaactgtatttcagaaagttcttgtcaagagttggggtttgcctaggatataaaactggtgttggatgcttgatttttgtctcttaatcgaagacaaccaggttcattttgaattacttgtaatgattatacatcttcttgcttagtaagcctcttccatgcttttgtttgaaacgacaatgaaatggaaattctagatactagaacagtttgcgcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="67844" stop="69584"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68144" g_stop="68480" g_length="337"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="337" r_length="337" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68481" i_stop="69120" i_length="640">
            <donor d_prob="0.923" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69121" g_stop="69270" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="338" r_stop="487" r_length="150" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="496" polyA_stop="512"/>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E203124" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>487</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E203124" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68144" e_stop="68480"/>
          <exon e_start="69121" e_stop="69270"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATTCAAGAAAGTGGTATTTAAATTCTGGGGAATGGATTGCTGCATTTGGTGGCCTCCCTTGTGGCGATAAATCTGAAGGGCCAGCTGGAGGTTCTAGTGAGACATCAGAATGTACTGAGACCATGGTTCCTGCAGATGAATGTCAATGTGTGTGTGTTTTGTGTGGTGAGTTTTTTGAAGACTTCTACAATGAAGAAAGTGATGAATGGATGTTCAAAGATGCTGTTTACATGAGTATTCCAAGTGAAAGTGATTGTCAGGGTCCGATAGTCCACAAGAACTGTATTTCAGAAAGTTCTTGTCAAGAGTTGGGGTTTGCCTAGGATATAAAACTGGTAAGTGATATGATGTTAAAGTTGATTTTAGATATTTTAAATACTTCACTAGATACTAATAATTATGAAAGAAGCCTTTTCATGTGGTTTGCTGGTAAATGGGTGGGATCTGTTTTTCATAGATAAGAATCTGCCATCGATTCTTAATGGAAAAACAAATATGTGGTACTTTTCATTGAAATTTTTCCCCAAATAAACTGAACACAAGTTACTTGTCGGCACCTTGAGTAAATTATGGATCTAATTGTCTGACAGCCCCATTTTGGAGTGCGTTGCTCTTAAGAATTAAATGCTTTTCAGAAGAGAGCACTTCCTAAAGTTCTTAAATTCTCGAAGTGCTTTGAATTCAAATTGGTTTTGTGCTGGCAATAAAATGGTTAGACAAGTTATGCTGCCCGTCAGAATTGTTAGTTGAAACTTTTGGACTGGCAATAAAATGGAGGAAGCTTAACTTTTGAAATACAATTTATGGATGCATTATTCTTTTTGATCTTCTTTTGGACTTGTGTACGTGCTTTTAATCTTGCCATCCTTCGTAGTTTGTAATTTGGTATTTATTCGTTCCTTGCAGTTCCTTTATTTCATTAGTAGCCACTGCTGACTTGTATTGTATCATATTGTCCATGGTTTCATTTCTCAGGTGTTGGATGCTTGATTTTTGTCTCTTAATCGAAGACAACCAGGTTCATTTTGAATTACTTGTAATGATTATACATCTTCTTGCTTAGTAAGCCTCTTCCATGCTTTTGTTTGAAACGACAATGAAATGGAAATTCTAGATACTAGAACA</genome_strand>
        <mrna_strand>TAATTCAAGAAAGTGGTATTTAAATTCTGGGGAATGGATTGCTGCATTTGGTGGCCTCCCTTGTGGCGATAAATCTGAAGGGCCAGCTGGAGGTTCTAGTGAGACATCAGAATGTACTGAGACCATGGTTCCTGCAGATGAATGTCAATGTGTGTGTGTTTTGTGTGGTGAGTTTTTTGAAGACTTCTACAATGAAGAAAGTGATGAATGGATGTTCAAAGATGCTGTTTACATGAGTATTCCAAGTGAAAGTGATTGTCAGGGTCCGATAGTCCACAAGAACTGTATTTCAGAAAGTTCTTGTCAAGAGTTGGGGTTTGCCTAGGATATAAAACTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTGGATGCTTGATTTTTGTCTCTTAATCGAAGACAACCAGGTTCATTTTGAATTACTTGTAATGATTATACATCTTCTTGCTTAGTAAGCCTCTTCCATGCTTTTGTTTGAAACGACAATGAAATGGAAATTCTAGATACTAGAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E277297" ref_strand="-" ref_description="SGN-E277297 [cLEL-3-H24]">
      <seq>gaagacttctacaatgaagaaagtgatgaatggatgttcaaagatgctgtttacatgagtattccaagtgaaagtgattgtcagggtccgatagtccacaagaactgtatttcagaaagttcttgtcaagagttggggtttgcctaggatataaaactggtgttggatgcttgatttttgtctcttaatcgaagacaaccaggttcattttgaattacttgtaatgattatacatcttcttgcttagtaagcctcttccatgcttttgtttgaatcagcaatgaaatggaaattcagattcttcgcacagtttgcgcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="68022" stop="69564"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68322" g_stop="68480" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="159" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68481" i_stop="69120" i_length="640">
            <donor d_prob="0.923" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69121" g_stop="69270" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="160" r_stop="309" r_length="150" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="318" polyA_stop="334"/>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E277297" ref_strand="-">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>309</cumulative_length_of_scored_exons>
        <coverage percentage="0.925" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E277297" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="68322" e_stop="68480"/>
          <exon e_start="69121" e_stop="69270"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGACTTCTACAATGAAGAAAGTGATGAATGGATGTTCAAAGATGCTGTTTACATGAGTATTCCAAGTGAAAGTGATTGTCAGGGTCCGATAGTCCACAAGAACTGTATTTCAGAAAGTTCTTGTCAAGAGTTGGGGTTTGCCTAGGATATAAAACTGGTAAGTGATATGATGTTAAAGTTGATTTTAGATATTTTAAATACTTCACTAGATACTAATAATTATGAAAGAAGCCTTTTCATGTGGTTTGCTGGTAAATGGGTGGGATCTGTTTTTCATAGATAAGAATCTGCCATCGATTCTTAATGGAAAAACAAATATGTGGTACTTTTCATTGAAATTTTTCCCCAAATAAACTGAACACAAGTTACTTGTCGGCACCTTGAGTAAATTATGGATCTAATTGTCTGACAGCCCCATTTTGGAGTGCGTTGCTCTTAAGAATTAAATGCTTTTCAGAAGAGAGCACTTCCTAAAGTTCTTAAATTCTCGAAGTGCTTTGAATTCAAATTGGTTTTGTGCTGGCAATAAAATGGTTAGACAAGTTATGCTGCCCGTCAGAATTGTTAGTTGAAACTTTTGGACTGGCAATAAAATGGAGGAAGCTTAACTTTTGAAATACAATTTATGGATGCATTATTCTTTTTGATCTTCTTTTGGACTTGTGTACGTGCTTTTAATCTTGCCATCCTTCGTAGTTTGTAATTTGGTATTTATTCGTTCCTTGCAGTTCCTTTATTTCATTAGTAGCCACTGCTGACTTGTATTGTATCATATTGTCCATGGTTTCATTTCTCAGGTGTTGGATGCTTGATTTTTGTCTCTTAATCGAAGACAACCAGGTTCATTTTGAATTACTTGTAATGATTATACATCTTCTTGCTTAGTAAGCCTCTTCCATGCTTTTGTTTGAAACGACAATGAAATGGAAATTCTAGATAC-TAGAACA</genome_strand>
        <mrna_strand>GAAGACTTCTACAATGAAGAAAGTGATGAATGGATGTTCAAAGATGCTGTTTACATGAGTATTCCAAGTGAAAGTGATTGTCAGGGTCCGATAGTCCACAAGAACTGTATTTCAGAAAGTTCTTGTCAAGAGTTGGGGTTTGCCTAGGATATAAAACTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTGGATGCTTGATTTTTGTCTCTTAATCGAAGACAACCAGGTTCATTTTGAATTACTTGTAATGATTATACATCTTCTTGCTTAGTAAGCCTCTTCCATGCTTTTGTTTGAATCAGCAATGAAATGGAAATTC-AGATTCTTCGCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E241201" ref_strand="-" ref_description="SGN-E241201 [cLED-26-I5]">
      <seq>attgaacaaaaatcatccagctgcaattctgttcaagatccaacttatacttaagcaagctactgagtgtgcattcactttgttagaacattaagggcttaaaacttttactaattgtctagagcctcggcaactttgtcccttttaagttctcggacacttggactatcattgcaaccatattgttggttttagataatggatattcccagattatgatagaagttctttgtttattgggatgtaatttcattgcctgtatgtttattgcaagtccttggtttttacttctagtagaaagtaggaggttcttgaagctgtcgactgaatgttcgttcacattagttgctgctcaagctgatgagaacctttacatacacaaacatatgtggaattgttcattgtgaattttttttgtgctcaacatcacaatcctcaaaaaaaaaaaaaaaaaactcgagactagttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="+" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="69071" stop="70108"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69371" g_stop="69807" g_length="437"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="437" r_length="437" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="438" polyA_stop="456"/>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="+" ref_id="SGN-E241201" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>437</cumulative_length_of_scored_exons>
        <coverage percentage="0.928" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E241201" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="69371" e_stop="69807"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGAACAAAAATCATCCAGCTGCAATTCTGTTCAAGATCCAACTTATACTTAAGCAAGCTACTGAGTGTGCATTCACTTTGTTAGAACATTAAGGGCTTAAAACTTTTACTAATTGTCTAGAGCCTCGGCAACTTTGTCCCTTTTAAGTTCTCGGACACTTGGACTATCATTGCAACCATATTGTTGGTTTTAGATAATGGATATTCCCAGATTATGATAGAAGTTCTTTGTTTATTGGGATGTAATTTCATTGCCTGTATGTTTATTGCAAGTCCTTGGTTTTTACTTCTAGTAGAAAGTAGGAGGTTCTTGAAGCTGTCGACTGAATGTTCGTTCACATTAGTTGCTGCTCAAGCTGATGAGAACCTTTACATACACAAACATCTGTGGAATTGTTCATTGTGAATTTTTTTTGTGCTCAACATCACAATCCTC</genome_strand>
        <mrna_strand>ATTGAACAAAAATCATCCAGCTGCAATTCTGTTCAAGATCCAACTTATACTTAAGCAAGCTACTGAGTGTGCATTCACTTTGTTAGAACATTAAGGGCTTAAAACTTTTACTAATTGTCTAGAGCCTCGGCAACTTTGTCCCTTTTAAGTTCTCGGACACTTGGACTATCATTGCAACCATATTGTTGGTTTTAGATAATGGATATTCCCAGATTATGATAGAAGTTCTTTGTTTATTGGGATGTAATTTCATTGCCTGTATGTTTATTGCAAGTCCTTGGTTTTTACTTCTAGTAGAAAGTAGGAGGTTCTTGAAGCTGTCGACTGAATGTTCGTTCACATTAGTTGCTGCTCAAGCTGATGAGAACCTTTACATACACAAACATATGTGGAATTGTTCATTGTGAATTTTTTTTGTGCTCAACATCACAATCCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E279598" ref_strand="+" ref_description="SGN-E279598 [cLER-5-N8]">
      <seq>aataaaaagaagaattttaagcaaaaaaaaaaatcaataaatcaaaggcaaaaaaatggagcaaaaaaatattttttttcttctttctcttatggttttactactaatttcctacacaacaacagctcgtttattgccaacaattaattctcaagaatctaatgggattattagtaataatccaatttcctcacaagtacaagaagatttcaatgatctcatgggaatagaagaatgtgaagaaaaagatgaaatttgtttcaagagaagaatgactgcagaggctcatttagattatatttatactcaacacaagccaaaacattgaacaagtttatattaatattattttttttcttaaggatggttaattagtaatgttcttttctatactttaaattatagtacaacgtactaaaagaaactttaatttattaaaacttgtatttcgatgtatcataagattgtagtactatgttttgtgagaattataaagatagccaaaagtttaattattaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73539" stop="71677"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73239" g_stop="73085" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="155" r_length="155" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73084" i_stop="72977" i_length="108">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72976" g_stop="72915" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="217" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72914" i_stop="72278" i_length="637">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72277" g_stop="71977" g_length="301"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="518" r_length="301" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="519" polyA_stop="528"/>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E279598" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>518</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E279598" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73239" e_stop="73085"/>
          <exon e_start="72976" e_stop="72915"/>
          <exon e_start="72277" e_stop="71977"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAAAAAGAAGAATTTTAAGCAAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAGGTATTGATTTTTTTTTATTTTAAATTTTTTAATGAATTTCTATAGAGCTTCAAAAATTAAATTATTGTTGAATAGTAATTAATTAATTAATTATTATTTTTTTCACAGAATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAACGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTAATTATTA</genome_strand>
        <mrna_strand>AATAAAAAGAAGAATTTTAAGCAAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAG............................................................................................................AATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAACGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTAATTATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E549931" ref_strand="+" ref_description="SGN-E549931 [TUS-5-I20]">
      <seq>ctttttctctctctctctcatcctcacaaagacaataaaaagaagaattttaagcaaaaaaaaaaaatcaataaatcaaaggcaaaaaaatggagcaaaaaaatattttttttcttctttctcttatggttttactactaatttcctacacaacaacagctcgtttattgccaacaattaattctcaaaaatctaatgggattattagtaataatccaatttcctcacaagtacaaaaagatttcaatgatctcatgggaatagaagaatgtgaagaaaaagatgaaatttgtttcaaaaaaaaaatgactgcaaaggctcatttaaattatatttatactcaacacaagccaaaacattgaacaagtttatattaatattattttttttcttaaggatggttaattagaaatgttcttttctatactttaaattatagtacaaagtactaaaagaaactttaatttattaaaacttgtatttcgatgtatcataagattgtagtactatgttttgtgagaattataaagatagccaaaagtttaattaanaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaatccccgggggggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73572" stop="71680"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73272" g_stop="73085" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="189" r_length="189" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73084" i_stop="72977" i_length="108">
            <donor d_prob="0.985" d_score="0.98"/>
            <acceptor a_prob="0.982" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72976" g_stop="72915" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="251" r_length="62" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72914" i_stop="72278" i_length="637">
            <donor d_prob="0.980" d_score="0.98"/>
            <acceptor a_prob="0.986" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72277" g_stop="71981" g_length="297"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="548" r_length="297" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="549" polyA_stop="582"/>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E549931" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>547</cumulative_length_of_scored_exons>
        <coverage percentage="0.919" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E549931" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73272" e_stop="73085"/>
          <exon e_start="72976" e_stop="72915"/>
          <exon e_start="72277" e_stop="71981"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGC-AAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAGGTATTGATTTTTTTTTATTTTAAATTTTTTAATGAATTTCTATAGAGCTTCAAAAATTAAATTATTGTTGAATAGTAATTAATTAATTAATTATTATTTTTTTCACAGAATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAACGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTAATT</genome_strand>
        <mrna_strand>CTTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGCAAAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAA............................................................................................................AATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAAAAGATTTCAATGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAAAAAAAAATGACTGCAAAGGCTCATTTAAATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGAAATGTTCTTTTCTATACTTTAAATTATAGTACAAAGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E389845" ref_strand="+" ref_description="SGN-E389845 [TUS-4-I18]">
      <seq>ctttttctctctctctctcatcctcacaaagacaataaaaagaagaattttaagcaaaaaaaaaaaatcaataaatcaaaggcaaaaaaatggagcaaaaaaatattttttttcttctttctcttatggttttactactaatttcctacacaacaacagctcgtttattgccaacaattaattctcaagaatctaatgggattattagtaataatccaatttcctcacaagtacaagaagatttcaatgatctcatgggaatagaagaatgtgaagaaaaagatgaaatttgtttcaagagaagaatgactgcagaggctcatttagattatatttatactcaacacaagccaaaacattgaacaagtttatattaatattattttttttcttaaggatggttaattagtaatgttcttttctatactttaaattatagtacaaagtactaaaagaaactttaatttattaaaacttgtatttcgatgtatcataagattgtagtactatgttttgtgagaattataaagatagccaaaagtttaattaananaaaaaaaaaaaaaaaaaaaaaaaaaaaaaccttctgggggggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73572" stop="71680"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73272" g_stop="73085" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="189" r_length="189" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73084" i_stop="72977" i_length="108">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72976" g_stop="72915" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="251" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72914" i_stop="72278" i_length="637">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72277" g_stop="71981" g_length="297"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="548" r_length="297" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="554" polyA_stop="583"/>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E389845" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>547</cumulative_length_of_scored_exons>
        <coverage percentage="0.918" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E389845" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73272" e_stop="73085"/>
          <exon e_start="72976" e_stop="72915"/>
          <exon e_start="72277" e_stop="71981"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGC-AAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAGGTATTGATTTTTTTTTATTTTAAATTTTTTAATGAATTTCTATAGAGCTTCAAAAATTAAATTATTGTTGAATAGTAATTAATTAATTAATTATTATTTTTTTCACAGAATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAACGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTAATT</genome_strand>
        <mrna_strand>CTTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGCAAAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAG............................................................................................................AATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAAAGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E376884" ref_strand="+" ref_description="SGN-E376884 [TUS-19-F19]">
      <seq>tttttctctctctctctcatcctcacaaagacaataaaaagaagaattttaagcaaaaaaaaaaaatcaataaatcaaaggcaaaaaaatggagcaaaaaaatattttttttcttctttctcttatggttttactactaatttcctacacaacaacagctcgtttattgccaacaattaattctcaagaatctaatgggattattagtaataatccaatttcctcacaagtacaagaagatttcaatgatctcatgggaatagaagaatgtgaagaaaaagatgaaatttgtttcaagagaagaatgactgcagaggctcatttagattatatttatactcaacacaagccaaaacattgaacaagtttatattaatattattttttttcttaaggatggttaattagtaatgttcttttctatactttaaattatagtacaaagtactaaaagaaactttaatttattaaaacttgtatttcgatgtatcataagattgtagtactatgttttgtgagaattataaagatagccaaaagtttaattaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73571" stop="71680"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73271" g_stop="73085" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="188" r_length="188" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73084" i_stop="72977" i_length="108">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72976" g_stop="72915" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="250" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72914" i_stop="72278" i_length="637">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72277" g_stop="71981" g_length="297"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="547" r_length="297" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="548" polyA_stop="574"/>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E376884" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E376884" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73271" e_stop="73085"/>
          <exon e_start="72976" e_stop="72915"/>
          <exon e_start="72277" e_stop="71981"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGC-AAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAGGTATTGATTTTTTTTTATTTTAAATTTTTTAATGAATTTCTATAGAGCTTCAAAAATTAAATTATTGTTGAATAGTAATTAATTAATTAATTATTATTTTTTTCACAGAATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAACGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTAATT</genome_strand>
        <mrna_strand>TTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGCAAAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAG............................................................................................................AATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAAAGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E377203" ref_strand="+" ref_description="SGN-E377203 [TUS-19-F18]">
      <seq>tttttctctctctctctcatcctcacaaagacaataaaaagaagaattttaagcaaaaaaaaaaaatcaataaatcaaaggcaaaaaaatggagcaaaaaaatattttttttcttctttctcttatggttttactactaatttcctacacaacaacagctcgtttattgccaacaattaattctcaagaatctaatgggattattagtaataatccaatttcctcacaagtacaagaagatttcaatgatctcatgggaatagaagaatgtgaagaaaaagatgaaatttgtttcaagagaagaatgactgcagaggctcatttagattatatttatactcaacacaagccaaaacattgaacaagtttatattaatattattttttttcttaaggatggttaattagtaatgttcttttctatactttaaattatagtacaaagtactaaaagaaactttaatttattaaaacttgtatttcgatgtatcataagattgtagtactatgttttgtgagaattataaagatagccaaaagtttaattaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73571" stop="71680"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73271" g_stop="73085" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="188" r_length="188" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73084" i_stop="72977" i_length="108">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72976" g_stop="72915" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="250" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72914" i_stop="72278" i_length="637">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72277" g_stop="71981" g_length="297"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="547" r_length="297" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="548" polyA_stop="575"/>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E377203" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E377203" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73271" e_stop="73085"/>
          <exon e_start="72976" e_stop="72915"/>
          <exon e_start="72277" e_stop="71981"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGC-AAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAGGTATTGATTTTTTTTTATTTTAAATTTTTTAATGAATTTCTATAGAGCTTCAAAAATTAAATTATTGTTGAATAGTAATTAATTAATTAATTATTATTTTTTTCACAGAATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAACGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTAATT</genome_strand>
        <mrna_strand>TTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGCAAAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAG............................................................................................................AATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAAAGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E377742" ref_strand="+" ref_description="SGN-E377742 [TUS-21-B11](-)">
      <seq>aaaaacaaaaaaaaattagctagtgagagnatttgtaattagtaaaaaaaattctttgttaattctatttagcgataaattatcaaaatattttgtttgctatgaataataaagcaataatttcaatttgtttttgtgtttaggcctagtaattttttagcctattgattttagctagctcgtatttgaatttttcttttttatggaaaagtaattttttatatatacgatataattttttttaaaaaaatattcagttgatcacctttcatttatttcggagttaagagataaaaaggggttcaatttaaatattttcttccaaaaagtatggcaaaaataattttttttgtacatatataaattgttgaatcgtctagatattacatataacttctaagaatatatatagagtaataaaatttttttttgtattttctttaatacacttattataatttttgagctccgattttaaaaattcatatatacgactctaacttcgaattgattttttttattgaaatagctcatgggaatagaagaatgtgaagaaaaagatgaaatttgtttcaagagaagaatgactgcagaggctcatttagattatatttatactcaacacaagccaaaacattgaacaagtttatattaatattattttttttcttaaggatggttaattagtaatgttcttttctatactttaaattatagtacaaagtactaaaagaaactttaatttattaaaacttgtatttcgatgtatcataagattgtagtactatgttttgtgagaattataaagatagccaaaagtttaattaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73107" stop="71680"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72807" g_stop="71981" g_length="827"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="826" r_length="826" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E377742" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>827</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E377742" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72807" e_stop="71981"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAACGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTAATT</genome_strand>
        <mrna_strand>AAAAACAAAAAAAAATTAGCTAGTGAG-AGNATTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTTAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAAAGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E368042" ref_strand="+" ref_description="SGN-E368042 [TUS-22-N17](-)">
      <seq>atattttcttccaaaaagtatggcaaaaataattttttttgtacatatataaattgttgaatcgtctagatattacatataacttctaagaatatatatagagtaataaaatttttttttgtattttctttaatacacttattataatttttgagctccgattttaaaaattcatatatacgactctaacttcgaattgattttttttattgaaatagctcatgggaatagaagaatgtgaagaaaaagatgaaatttgtttcaagagaagaatgactgcagaggctcatttagattatatttatactcaacacaagccaaaacattgaacaagtttatattaatattattttttttcttaaggatggttaattagtaatgttcttttctatactttaaattatagtacaaagtactaaaagaaactttaatttattaaaacttgtatttcgatgtatcataagattgtagtactatgttttgtgagaattataaagatagccaaaagtttaattaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="72795" stop="71680"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72495" g_stop="71981" g_length="515"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="515" r_length="515" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E368042" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E368042" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72495" e_stop="71981"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAACGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTAATT</genome_strand>
        <mrna_strand>ATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAAAGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E215575" ref_strand="+" ref_description="SGN-E215575 [cLEL-15-C24](-)">
      <seq>atttagattatatttatactcaacacaagccaaaacattgaacaagtttatattaatattattttttttcttaaggatggttaattagtaatgttcttttctatactttaaattatagtacaaagtactaaaagaaactttaatttattaaaacttgtatttcgatgtatcataagattgtagttctatgttttgtgagaattataaagatagccaaaagtttaattaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="72507" stop="71680"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72207" g_stop="71981" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="227" r_length="227" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="228" polyA_stop="244"/>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E215575" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>227</cumulative_length_of_scored_exons>
        <coverage percentage="0.930" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E215575" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72207" e_stop="71981"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAACGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTAATT</genome_strand>
        <mrna_strand>ATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAAAGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTTCTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E720049" ref_strand="+" ref_description="SGN-E720049 [FC09CG01]">
      <seq>gggcggccaaatcggccgaattgatctctcatctctctttttctctctctctctcatcctcacaaagacaataaaaagaagaattttaagcaaaaaaaaaatcaataaatcaaaggcaaaaaaatggagcaaaaaaatattttttttcttctttctcttatggttttactactaatttcctacacaacaacagctcgtttattgccaacaattaattctcaagaatctaatgggattattagtaataatccaatttcctcacaagtacaagaagatttcaatgatctcatgggaatagaaaaatgtgaagaaaaagatgaaatttgtttcaagaaaaaaatgactgcaaaggctcatttaaattatatttatactcaacacaagccaaaacattgaacaagtttatattaatattatttttttcttaaggatggttaattagaaatgttcttttctatactttaaattatagtacaacgtactaaaagaaactttaatttattaaaacttgtatttcgatgtatcataaaattgtagtactatgttttgtgagaattataaagatagccaaaagtttatttaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73585" stop="71680"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73285" g_stop="73085" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="223" r_length="200" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73084" i_stop="72977" i_length="108">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72976" g_stop="72915" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="285" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72914" i_stop="72278" i_length="637">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72277" g_stop="71984" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="578" r_length="293" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="582" polyA_stop="610"/>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E720049" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="0.913" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E720049" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73285" e_stop="73085"/>
          <exon e_start="72976" e_stop="72915"/>
          <exon e_start="72277" e_stop="71984"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTCTCATCTCTCTTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGCAAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAGGTATTGATTTTTTTTTATTTTAAATTTTTTAATGAATTTCTATAGAGCTTCAAAAATTAAATTATTGTTGAATAGTAATTAATTAATTAATTATTATTTTTTTCACAGAATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAACGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTA</genome_strand>
        <mrna_strand>ATCTCTCATCTCTCTTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGCAAA-AAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAG............................................................................................................AATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATGGGAATAGAAAAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAAAAAAATGACTGCAAAGGCTCATTTAAATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTA-TTTTTTTCTTAAGGATGGTTAATTAGAAATGTTCTTTTCTATACTTTAAATTATAGTACAACGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAAATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E549930" ref_strand="+" ref_description="SGN-E549930 [TUS-5-I19]">
      <seq>ctttttctctctctctctcatcctcacaaagacaataaaaagaagaattttaagcaaaaaaaaaaaatcaataaatcaaaggcaaaaaaatggagcaaaaaaatattttttttcttctttcccttagggttttactactaatttcctacacaacaacagctcgtttattgccaacaattaattctcaaaaatctaatgggattattagtaataatccaatttcctcacaagtacaaaaaaatttcaatgatctcatgggaatagaaaaatgtgaaaaaaaagatgaaatttgtttcaaaaaaaaaatgactgcaaaggctcatttaaattatatttatactcaacacaagccaaaactttgaacaagtttatataaatattattttttttcttaaggatggttaattagaaatgttcttttctatactttaaattatagtacaaagtactaaaagaaactttaatttattaaaacttgtatttcgatgtatcataaaattgtagtactatgttttgtgaaaattataaagatagccaaaagtttatttannaaaaaaaaagaaaaaaaaaaaaaaaaaaaaaatttcgggggggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73572" stop="71680"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73272" g_stop="73085" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="189" r_length="189" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73084" i_stop="72977" i_length="108">
            <donor d_prob="0.985" d_score="0.98"/>
            <acceptor a_prob="0.982" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72976" g_stop="72915" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="251" r_length="62" r_score="0.968"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72914" i_stop="72278" i_length="637">
            <donor d_prob="0.980" d_score="0.96"/>
            <acceptor a_prob="0.986" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72277" g_stop="71984" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="545" r_length="294" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="552" polyA_stop="583"/>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E549930" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>544</cumulative_length_of_scored_exons>
        <coverage percentage="0.914" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E549930" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73272" e_stop="73085"/>
          <exon e_start="72976" e_stop="72915"/>
          <exon e_start="72277" e_stop="71984"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGC-AAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAGGTATTGATTTTTTTTTATTTTAAATTTTTTAATGAATTTCTATAGAGCTTCAAAAATTAAATTATTGTTGAATAGTAATTAATTAATTAATTATTATTTTTTTCACAGAATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAACGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTA</genome_strand>
        <mrna_strand>CTTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGCAAAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCCCTTAGGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAA............................................................................................................AATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAAAAAATTTCAATGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATGGGAATAGAAAAATGTGAAAAAAAAGATGAAATTTGTTTCAAAAAAAAAATGACTGCAAAGGCTCATTTAAATTATATTTATACTCAACACAAGCCAAAACTTTGAACAAGTTTATATAAATATTATTTTTTTTCTTAAGGATGGTTAATTAGAAATGTTCTTTTCTATACTTTAAATTATAGTACAAAGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAAATTGTAGTACTATGTTTTGTGAAAATTATAAAGATAGCCAAAAGTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E389847" ref_strand="+" ref_description="SGN-E389847 [TUS-4-I20]">
      <seq>ctttttctctctctctctcatcctcacaaagacaataaaaagaagaattttaagcaaaaaaaaaaaatcaataaatcaaaggcaaaaaaatggagcaaaaaaatattttttttcttctttctcttatggttttactactaatttcctacacaacaacagctcgtttattgccaacaattaattctcaagaatctaatgggattattagtaataatccaatttcctcacaagtacaagaagatttcaatgatctcatgggaatagaagaatgtgaagaaaaagatgaaatttgtttcaagagaagaatgactgcagaggctcatttagattatatttatactcaacacaagccaaaacattgaacaagtttatattaatattattttttttcttaaggatggttaattagaaatgttcttttctatactttaaattatagtacaaagtactaaaagaaactttaatttattaaaacttgtatttcgatgtatcataagattgtagtactatgttttgtgagaattataaagatagccaaaagtttntttnnnanaaaaaaaaaaaaaaaaaaaaaaaaaaaaancccccgggggggggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73572" stop="71681"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73272" g_stop="73085" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="189" r_length="189" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73084" i_stop="72977" i_length="108">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72976" g_stop="72915" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="251" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72914" i_stop="72278" i_length="637">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72277" g_stop="71984" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="545" r_length="294" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="552" polyA_stop="582"/>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E389847" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>544</cumulative_length_of_scored_exons>
        <coverage percentage="0.910" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E389847" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73272" e_stop="73085"/>
          <exon e_start="72976" e_stop="72915"/>
          <exon e_start="72277" e_stop="71984"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGC-AAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAGGTATTGATTTTTTTTTATTTTAAATTTTTTAATGAATTTCTATAGAGCTTCAAAAATTAAATTATTGTTGAATAGTAATTAATTAATTAATTATTATTTTTTTCACAGAATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAACGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTA</genome_strand>
        <mrna_strand>CTTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGCAAAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAG............................................................................................................AATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGAAATGTTCTTTTCTATACTTTAAATTATAGTACAAAGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTN</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E230951" ref_strand="+" ref_description="SGN-E230951 [cLED-5-E3]">
      <seq>tttttctctctctctctcatcctcacaaagacaataaaaagaagaattttaagcaaaaaaaaaaaatcaataaatcaaaggcaaaaaaatggagcaaaaaaatattttttttcttctttctcttatggttttactactaatttcctacacaacaacagctcgtttattgccaacaattaattctcaagaatctaatgggattattagtaataatccaatttcctcacaagtacaagaagatttcaatgatctcatgggaatagaagaatgtgaagaaaaagatgaaatttgtttcaagagaagaatgactgcagaggctcatttagattatatttatactcaacacaagccaaaacattgaacaagtttatattaatattattttttttcttaaggatggttaattagtaatgttcttttctatactttaaattatagtacaaagtactaaaagaaactttaatttattaaaacttgtatttcgatgtatcataagattgtagtactatgttttgtgagaattataaagatagccaaaagttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73571" stop="71684"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73271" g_stop="73085" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="188" r_length="188" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73084" i_stop="72977" i_length="108">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72976" g_stop="72915" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="250" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72914" i_stop="72278" i_length="637">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72277" g_stop="71984" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="544" r_length="294" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E230951" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E230951" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73271" e_stop="73085"/>
          <exon e_start="72976" e_stop="72915"/>
          <exon e_start="72277" e_stop="71984"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGC-AAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAGGTATTGATTTTTTTTTATTTTAAATTTTTTAATGAATTTCTATAGAGCTTCAAAAATTAAATTATTGTTGAATAGTAATTAATTAATTAATTATTATTTTTTTCACAGAATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAACGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTA</genome_strand>
        <mrna_strand>TTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGCAAAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAG............................................................................................................AATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAAAGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E392454" ref_strand="+" ref_description="SGN-E392454 [TUS-36-A14](-)">
      <seq>tagtaattttttagcctattgattttagctagctcgtatttgaatttttcttttttatggaaaagtaattttttatatatacgatataattttttttaaaaaaatattcagttgatcacctttcatttatttcggagttaagagataaaaaggggttcaatttaaatattttcttccaaaaagtatggcaaaaataattttttttgtacatatataaatcgccgaatcgtctagatattacatataacttctaagaatatatatagagtaataaaatttttttttgtattttctttaatacacttattataatttttgagctccgattttaaaaattcatatatacgactctaacttcgaattgattttttttattgaaatagctcatgggaatagaagaatgtgaagaaaaagatgaaatttgtttcaagagaagaatgactgcagaggctcatttagattatatttatactcaacacaagccaaaacattgaacaagtttatattaatattattttttttcttaaggatggttaattagtaatgttcttttctatactttaaattatagtacaaagtactaaaagaaactttaatttattaaaacttgtatttcgatgtatcataagattgtagtactatgttttgtgagaattataaagatagccaaaagtttaataaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="72960" stop="71680"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72660" g_stop="71984" g_length="677"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="677" r_length="677" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="678" polyA_stop="689"/>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E392454" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>677</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E392454" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72660" e_stop="71984"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAACGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTA</genome_strand>
        <mrna_strand>TAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTTAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATCGCCGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAAAGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E389570" ref_strand="+" ref_description="SGN-E389570 [TUS-4-H11](-)">
      <seq>caaaatattttgtttgctatgaataatacagcaataatttcaatttgtttttgtgtttaggcctagtaattttttagcttattgattttagctagctcgtatttgaatttatcttttttatggaaaagtaattttttatatatacgatataattttttttaaaaaaatattcagttgatcacctttcatttatttcggagttaagagataaaaaggggttcaatttaaatattttcttccaaaaagtatggcaaaaataattttttttgtacatatataaattgttgaatcgtctagatattacatataacttctaagaatatatatagagtaataaaatttttttttgtattttctttaatacacttattataatttttgagctccgattttaaaaattcatatatacgactctaacttcgaattgattttttttattgaaatagctcatgggaatagaagaatgtgaagaaaaagatgaaatttgtttcaagagaagaatgactgcagaggctcatttagattatatttatactcaacacaagccaaaacattgaacaagtttatattaatattattttttttcttaaggatggttaattagtaatgttcttttctatactttaaattatagtacaaagtactaaaagaaactttaatttattagaacttgtatttcgatgtatcataagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73023" stop="71730"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72723" g_stop="72030" g_length="694"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="694" r_length="694" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E389570" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>694</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E389570" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72723" e_stop="72030"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAACGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGAT</genome_strand>
        <mrna_strand>CAAAATATTTTGTTTGCTATGAATAATACAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCTTATTGATTTTAGCTAGCTCGTATTTGAATTTATCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTTAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAAAGTACTAAAAGAAACTTTAATTTATTAGAACTTGTATTTCGATGTATCATAAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E389495" ref_strand="+" ref_description="SGN-E389495 [TUS-4-D12](-)">
      <seq>ggaaaagtaattttttatatatacgatataatttttttaaaaaaaatattcagttgatcgcctttcatttatttcggagttaagagataaaaaggggttcaatttaaatattttcttccaaaaagtatggcaaaaataattttttttgtacatatataaattgttgaatcgtctagatattacatataacttctaagaatatatatagagtaataaaatttttttttgtattttctttaatacacttattataatttttgagctccgattttaaaaattcatatatacgactctaacttcgaattgattttttttattgaaatagctcatgggaatagaagaatgtgaagaaaaagatgaaatttgtttcaagagaagaatgactgcagaggctcatttagattatatttatactcaacacaagccaaaacattgaacaagtttatattaatattattttttttcttaaggatggttaattagtaatgttcttttctatactttaaattatagtacaaagtactaaaagaatctttaatttattagaacttgtatttcgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="72902" stop="71741"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72602" g_stop="72041" g_length="562"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="562" r_length="562" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E389495" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E389495" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72602" e_stop="72041"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAACGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATG</genome_strand>
        <mrna_strand>GGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCGCCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAAAGTACTAAAAGAATCTTTAATTTATTAGAACTTGTATTTCGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E550420" ref_strand="+" ref_description="SGN-E550420 [TUS-5-D12](-)">
      <seq>aattagctagtgagaagattttgtaattagtaaaaaaaattctttgttaattctatttagcgataaattatcaaaatattttgtttgctatgaataataaagcaataatttcaatttgtttttgtgtttaggcctagtaattttttagcctattgattttagctagctcgtatttgaatttttcttttttatggaaaagtaattttttatatatacgatataattttttttaaaaaaatattcagttgatcacctttcatttatttcggagttaagagataaaaaggggttcaatttaaatattttcttccaaaaagtatggcaaaaataattttttttgtacatatataaattgttgaatcgtctagatattacatataacttctaagaatatatatagagtaataaaatttttttttgtattttctttaatacacttattataatttttgagctccgattttaaaaattcatatatacgactctaacttcgaattgattttttttattgaaatagctcatgggaatagaagaatgtgaagaaaaagatgaaatttgtttcaagagaagaatgactgcagaggctcatttagattatatttatactcaacacaagccaaaacattgaacaagtttatattaatattattttttttcttaaggatggttaattagtaatgttcttttctatactttaaattatagtacaaagtactaaaagaaactttaatttattgaaacttgtatttcga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73094" stop="71743"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72794" g_stop="72043" g_length="752"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="752" r_length="752" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E550420" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>752</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E550420" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72794" e_stop="72043"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAACGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGA</genome_strand>
        <mrna_strand>AATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTTAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAAAGTACTAAAAGAAACTTTAATTTATTGAAACTTGTATTTCGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E389987" ref_strand="+" ref_description="SGN-E389987 [TUS-4-C22](-)">
      <seq>tgagaagattttgtaattagtaaaaaaaattctttgttaattctatttagcgataaattatcaaaatattttgtttgctatgaataataaagcaataatttcaatttgtttttgtgtttaggcctagtaattttttagcctattgattttagctagctcgtatttgaatttttcttttttatggaaaagtaattttttatatatacgatataattttttttaaaaaaatattcagttgatcacctttcatttatttcggagttaagagataaaaaggggttcaatttaaatattttcttccaaaaagtatggcaaaaataattttttttgtacatatataaattgttgaatcgtctagatattacatataacttctaagaatatatatagagtaataaaatttttttttgtattttctttaatacacttattataatttttgagctccgattttaaaaattcatatatacgactctaacttcgaattgattttttttattgaaatagctcatgggaatagaagaatgtgaagaaaaagatgaaatttgtttcaagagaagaatgactgcagaggctcatttagattatatttatactcaacacaagccaaaacattgaacaagtttatattaatattattttttttcttaaggatggttaattagtaatgttcttttctatactttaaattatagtacaaagtactaaaagaaactttaatttataaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73084" stop="71755"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72784" g_stop="72056" g_length="729"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="729" r_length="729" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E389987" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>729</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E389987" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72784" e_stop="72056"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAACGTACTAAAAGAAACTTTAATTTATTAAA</genome_strand>
        <mrna_strand>TGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTTAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAAAGTACTAAAAGAAACTTTAATTTATAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E550100" ref_strand="+" ref_description="SGN-E550100 [TUS-5-C34](-)">
      <seq>agcaataatttcaatttgtttttgtgtttaggcctagtaattttttagcctattgattttagctagctcgtatttgaatttttcttttttatggaaaagtaattttttatatatacgatataattttttttaaaaaaatattcagttgatcacctttcatttatttcggagttaagagataaaaaggggttcaatttaaatattttcttccaaaaagtatggcaaaaataattttttttgtacatatataaattgttgaatcgtctagatattacatataacttctaagaatatatatagagtaataaaatttttttttgtattttctttaatacacttattataatttttgagctccgattttaaaaattcatatatacgactctaacttcgaattgattttttttattgaaatagctcatgggaatagaagaatgtgaagaaaaagatgaaatttgtttcaagagaagaatgactgcagaggctcatttagattatatttatactcaacacaagccaaaacattgaacaagtttatattaatattattgtttttcttaaggatggttaattagtaatgttcttttctatactttaaattatagtacagaatactaaaagaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="72994" stop="71786"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72694" g_stop="72071" g_length="624"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="624" r_length="624" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E550100" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>624</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E550100" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72694" e_stop="72071"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAACGTACTAAAAGAAA</genome_strand>
        <mrna_strand>AGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTTAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTGTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAGAATACTAAAAGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E401857" ref_strand="+" ref_description="SGN-E401857 [PPC-5-F21]">
      <seq>tttttttctctctcatcatcacacagagacaataaaaagaagaaatttaagcaaaaaaatcaataaatcaaaggcaaaaaatggagcaaaaaaatattgtatttcttctttctcttatggttttactactaatttcctacacaacttcagctcgtttattgccaacaattaattctcaagagaataagaagattgaatctaatgggattattagtaataatccaatttcctcacaagtacaagaagatttcaatgatctcatgggaatagaagaatgtgaagaaaaagatgaagtttgtttcaagagaagaatgattgcagaggctcatttggattatatttatactcaacacaagccaaaacattgaacaaggttatattaataatttttttttccttaaggatgattaattagtaatgttttttctatacttgaaaaccttaaattagagtactacgcactaaaagaaactttaatttattaaaactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73569" stop="71752"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73271" g_stop="73085" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="180" r_length="180" r_score="0.914"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73084" i_stop="72992" i_length="93">
            <donor d_prob="0.985" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.78"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72991" g_stop="72915" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="257" r_length="77" r_score="0.857"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72914" i_stop="72278" i_length="637">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72277" g_stop="72097" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="437" r_length="180" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E401857" ref_strand="+">
        <total_alignment_score>0.917</total_alignment_score>
        <cumulative_length_of_scored_exons>445</cumulative_length_of_scored_exons>
        <coverage percentage="0.908" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E401857" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73271" e_stop="73085"/>
          <exon e_start="72991" e_stop="72915"/>
          <exon e_start="72277" e_stop="72097"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGCAAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAGGTATTGATTTTTTTTTATTTTAAATTTTTTAATGAATTTCTATAGAGCTTCAAAAATTAAATTATTGTTGAATAGTAATTAATTAATTAATTATTATTTTTTTCACAGAATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAA</genome_strand>
        <mrna_strand>TTTTTTTCTCTCTC-ATCAT-CACACAGAGACAATAAAAAGAAGAAATTTAAGC----AAAAAAATCAATAAATCAAAGGC-AAAAAATGGAGCAAAAAAATATTGTATTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACTTCAGCTCGTTTATTGCCAACAATTAATTCTCAAG.............................................................................................AGAATAAGAAGATTGAATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAGTTTGTTTCAAGAGAAGAATGATTGCAGAGGCTCATTTGGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGGTTATATTAATAATTTTTTTTTCCTTAAGGATGATTAATTAGTAATGTT-TTTTCTATACTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E389589" ref_strand="+" ref_description="SGN-E389589 [TUS-4-I18](-)">
      <seq>ctttttctctctctctctcatcctcacaaagacaataaaaagaagaattttaagcaaaaaaaaaaaatcaataaatcaaaggcaaaaaaatggagcaaaaaaatattttttttcttctttctcttatggttttactactaatttcctacacaacaacagctcgtttattgccaacaattaattctcaagaatctaatgggattattagtaataatccaatttcctcacaagtacaagaagatttcaatgatctcatgggaatagaagaatgtgaagaaaaagatgaaatttgtttcaagagaagaatgactgcagaggctcatttagattatatttatactcaacacaagccaaaacattgaacaagtttatattaatattattttttttcttaaggatggttaattattaacgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73572" stop="71814"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73272" g_stop="73085" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="189" r_length="189" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73084" i_stop="72977" i_length="108">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72976" g_stop="72915" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="251" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72914" i_stop="72278" i_length="637">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72277" g_stop="72114" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="415" r_length="164" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E389589" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>414</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E389589" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73272" e_stop="73085"/>
          <exon e_start="72976" e_stop="72915"/>
          <exon e_start="72277" e_stop="72114"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGC-AAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAGGTATTGATTTTTTTTTATTTTAAATTTTTTAATGAATTTCTATAGAGCTTCAAAAATTAAATTATTGTTGAATAGTAATTAATTAATTAATTATTATTTTTTTCACAGAATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGT</genome_strand>
        <mrna_strand>CTTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGCAAAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAG............................................................................................................AATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTATTAACGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E389590" ref_strand="+" ref_description="SGN-E389590 [TUS-4-I20](-)">
      <seq>atcccccgggttgcagggattttctttatctctgtcatcctcccaaagtcaataagacgtagattttagagcaaaaaaaaaaaatcaataaatcaaaggcaaaaaaatggagcaaaaaaatattttttttcttctttctcttagggttttggtactaatttcctacacatcatcagctcgtgtattgccatcaattaattctcaagaatgtaatgggattattagtaataatccaatttcctcacaagtacaagaagatttcaatgatgtcatgggaatagaagaatgtgaagataaagatgaaatttgtttcaagagaagaatgactgcagaggctcatttagattatatttatactcaacacaagccaaaacattgaacaagtttatattaatattattctttctcttaaggatggttaattattaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73570" stop="71817"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73270" g_stop="73085" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="206" r_length="187" r_score="0.892"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73084" i_stop="72977" i_length="108">
            <donor d_prob="0.985" d_score="0.92"/>
            <acceptor a_prob="0.982" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72976" g_stop="72915" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="268" r_length="62" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72914" i_stop="72278" i_length="637">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72277" g_stop="72116" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="430" r_length="162" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E389590" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>410</cumulative_length_of_scored_exons>
        <coverage percentage="0.953" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E389590" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73270" e_stop="73085"/>
          <exon e_start="72976" e_stop="72915"/>
          <exon e_start="72277" e_stop="72116"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGC-AAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAGGTATTGATTTTTTTTTATTTTAAATTTTTTAATGAATTTCTATAGAGCTTCAAAAATTAAATTATTGTTGAATAGTAATTAATTAATTAATTATTATTTTTTTCACAGAATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAAT</genome_strand>
        <mrna_strand>TTTTCTTTATCTCTGTCATCCTCCCAAAGTCAATAAGACGTAGATTTTAGAGCAAAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTAGGGTTTTGGTACTAATTTCCTACACATCATCAGCTCGTGTATTGCCATCAATTAATTCTCAAG............................................................................................................AATGTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATGGGAATAGAAGAATGTGAAGATAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTCTTTCTCTTAAGGATGGTTAATTATTAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E404431" ref_strand="+" ref_description="SGN-E404431 [PPC-14-A9]">
      <seq>agtttttctctctctctcatcatcacacagagacaataaaaagaagaaatttaagcaaaaaaatcaataaatcaaaggcaaaaaacggagcaaaaaaatattgtatttcttctttctcttatggttttactactaatttcctacacaacttcagctcgtttattgccaacaattaattctcaagagaataagaagattgaatctaatgggattattagtaataatccaatttcctcacaagtacaagaagatttcaatgatctcatgggaatagaagaatgtgaagataaagatgaagtttgtttcaagagaagaatgattgcagaggctcatttggattatatttatactccacacaagccaaaacattgaacaaggttatattaatattttatttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73571" stop="71840"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73273" g_stop="73085" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="184" r_length="184" r_score="0.905"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73084" i_stop="72992" i_length="93">
            <donor d_prob="0.985" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.78"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72991" g_stop="72915" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="185" r_stop="261" r_length="77" r_score="0.857"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72914" i_stop="72278" i_length="637">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72277" g_stop="72139" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="262" r_stop="400" r_length="139" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E404431" ref_strand="+">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>405</cumulative_length_of_scored_exons>
        <coverage percentage="1.013" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E404431" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73273" e_stop="73085"/>
          <exon e_start="72991" e_stop="72915"/>
          <exon e_start="72277" e_stop="72139"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTTTTCTCTCTCTCTC-TCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGCAAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAGGTATTGATTTTTTTTTATTTTAAATTTTTTAATGAATTTCTATAGAGCTTCAAAAATTAAATTATTGTTGAATAGTAATTAATTAATTAATTATTATTTTTTTCACAGAATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTT</genome_strand>
        <mrna_strand>AGTTTTTCTCTCTCTCTCATCAT-CACACAGAGACAATAAAAAGAAGAAATTTAAGC----AAAAAAATCAATAAATCAAAGGC-AAAAAACGGAGCAAAAAAATATTGTATTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACTTCAGCTCGTTTATTGCCAACAATTAATTCTCAAG.............................................................................................AGAATAAGAAGATTGAATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATGGGAATAGAAGAATGTGAAGATAAAGATGAAGTTTGTTTCAAGAGAAGAATGATTGCAGAGGCTCATTTGGATTATATTTATACTCCACACAAGCCAAAACATTGAACAAGGTTATATTAATATTTTATTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E231173" ref_strand="+" ref_description="SGN-E231173 [cLED-5-E4]">
      <seq>tttttctctctctctctcatcctcacaaagacaataaaaagaagaattttaagcaaaaaaaaaaaatcaataaatcaaaggcaaaaaaatggagcaaaaaaatattttttttcttctttctcttatggttttactactaatttcctacacaacaacagctcgtttattgccaacaattaattctcaagaatctaatgggattattagtaataatccaatttcctcacaagtacaagaagatttcaatgatctcatgggaatagaagaatgtgaagaaaaagatgaaatttgtttcaagagaagaatgactgcagaggctcatttagattatatttatanctcaacacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73571" stop="71880"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73271" g_stop="73085" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="188" r_length="188" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73084" i_stop="72977" i_length="108">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72976" g_stop="72915" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="250" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72914" i_stop="72278" i_length="637">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72277" g_stop="72180" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="349" r_length="99" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E231173" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>347</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E231173" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73271" e_stop="73085"/>
          <exon e_start="72976" e_stop="72915"/>
          <exon e_start="72277" e_stop="72180"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGC-AAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAGGTATTGATTTTTTTTTATTTTAAATTTTTTAATGAATTTCTATAGAGCTTCAAAAATTAAATTATTGTTGAATAGTAATTAATTAATTAATTATTATTTTTTTCACAGAATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATA-CTCAACACAA</genome_strand>
        <mrna_strand>TTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGCAAAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAG............................................................................................................AATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATANCTCAACACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E389758" ref_strand="+" ref_description="SGN-E389758 [TUS-4-D12]">
      <seq>tctaatgggattattagtaataatccaatttcctcacaagtacaagaagatttcaatgatgtaagttctttctcttattttccacccttatatacggtatatgagcttatccgaatcgatatgatcagtgaaaattcatattatcgatttgagatttcacttctttcaaaaacaaaaaaaaattagctagtgagaagattttgtaattagtaaaaaaaattctttgttaattctatttagcgataaattatcaaaatattttgtttgctatgaataataaagcaataatttcaatttgtttttgtgtttaggcctagtaattttttagcctattgattttagctagctcgtatttgaatttttcttttttatggaaaagtaattttttatatatacgatataattttttttaaaaaaatattcagttgatcacctttcatttatttcggagttaagagataaaaaggggttcaatttaaatattttcttccaaaaagtatggcaaaaataattttttttgtacatatataaattgttgaatcgtctagatattacatataacttctaagaatatatatagagtaataaaatttttttttgtattttctttaatacacttattataatttttgagctccgattttaaaattcatatatacgactctaacttcgaattgattttttttattggaatagctcatgggaatagaagaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73274" stop="71959"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72974" g_stop="72259" g_length="716"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="715" r_length="715" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E389758" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>716</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E389758" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72974" e_stop="72259"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAAT</genome_strand>
        <mrna_strand>TCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTTAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTT-AAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGGAATAGCTCATGGGAATAGAAGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E389827" ref_strand="+" ref_description="SGN-E389827 [TUS-4-H11]">
      <seq>tctaatgggattattagtaataatccaatttcctcacaagtacaagaagatttcaatgatgtaagttctttctcttattttccacccttatatacggtatatgagcttatccgaatcgatatgatcagtgaaaattcatattatcgatttgagatttcacttctttcaaaaacaaaaaaaaattagctagtgagaagattttgtaattagtaaaaaaaattctttgttaattctatttagcgataaattatcaaaatattttgtttgctatgaataataaagcaataatttcaatttgtttttgtgtttaggcctagtaattttttagcctattgattttagctagctcgtatttgaatttttcttttttatggaaaagtaattttttatatatacgatataattttttttaaaaaaatattcagttgatcacctttcatttatttcggagttaagagataaaaaggggttcaatttaaatattttcttccaaaaagtatggcaaaaataattttttttgtacatatataaattgttgaatcgtctagatattacatataacttctaagaatatatatagagtaataaaatttttttttgtattttctttaatacacttattataatttttgagctccgatttttaaaattcatatatacgactctaacttcgaattgattttttttattgaaatagctcatgggaataga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73274" stop="71964"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72974" g_stop="72264" g_length="711"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="711" r_length="711" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E389827" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>711</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E389827" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72974" e_stop="72264"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGA</genome_strand>
        <mrna_strand>TCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTTAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTTAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E550170" ref_strand="+" ref_description="SGN-E550170 [TUS-5-D12]">
      <seq>tctattcggattattagtaataatccaatttcctcacaagtacaagaagatttcaatgatgtaagttctttctcttattttccacccttatatacggtatatgagcttatccgaatcgatatgatcagtgaaaattcatattatcgatttgagatttcacttctttcaaaaacaaaaaaaaattagctagtgagaagattttgtaattagtaaaaaaaattctttgttaattctatttagcgataaattatcaaaatattttgtttgctatgaataataaagcaataatttcaatttgtttttgtgtttaggcctagtaattttttagcctattgattttagctagctcgtatttgaatttttcttttttatggaaaagtaattttttatatatacgatataattttttttaaaaaaatattcagttgatcacctttcatttatttcggagttaagagataaaaaggggttcaatttaaatattttcttccaaaaagtatggcaaaaataattttttttgtacatatataaattgttgaatcgtctagatattacatataacttctaagaatatatatagagtaataaaatttttttttgtattttctttaatacacttattataatttttgagctccgattttaaaaattcatatatacgactctaacttcgaattgattttttttattgaaatagctcatggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73274" stop="71970"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72974" g_stop="72270" g_length="705"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="705" r_length="705" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E550170" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>705</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E550170" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72974" e_stop="72270"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGG</genome_strand>
        <mrna_strand>TCTATTCGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTTAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E377743" ref_strand="+" ref_description="SGN-E377743 [TUS-21-B11]">
      <seq>ctaatgggattattagtaataatccaatttcctcacaagtacaagaagatttcaatgatgtaagttctttctcttattttccacccttatatacggtatatgagcttatccgaatcgatatgatcagtgaaaattcatattatcgatttgagatttcacttctttcaaaaacaaaaaaaaattagctagtgagaagattttgtaattagtaaaaaaaattctttgttaattctatttagcgataaattatcaaaatattttgtttgctatgaataataaagcaataatttcaatttgtttttgtgtttaggcctagtaattttttagcctattgattttagctagctcgtatttgaatttttcttttttatggaaaagtaattttttatatatacgatataattttttttaaaaaaatattcagttgatcacctttcatttatttcggagttaagagataaaaaggggttcaatttaaatattttcttccaaaaagtatggcaaaaataattttttttgtacatatataaattgttgaatcgtctagatattacatataacttctaagaatatatatagagtaataaaatttttttttgtattttctttaatacacttattataatttttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73273" stop="72042"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72973" g_stop="72342" g_length="632"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="632" r_length="632" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E377743" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>632</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E377743" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72973" e_stop="72342"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGA</genome_strand>
        <mrna_strand>CTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTTAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E231904" ref_strand="+" ref_description="SGN-E231904 [cLED-7-N15]">
      <seq>ctaatgggattattagtaataatccaatttcctcacaagttcaagaagatttcaatgatgtaagttctttctcttattttccacccttatatacggtatatgagcttatccgaatcgatatgatcagtgaaaattcatattatcgatttgagatttcacttctttcaaaaacaaaaaaaaattagctagtgagaagattttgtaattagtaaaaaaaattctttgttaattctatttagcgataaattatcaaaatattttgtttgctatgaataataaagcaataatttcaatttgtttttgtgtttatgcctagtaattttttagcctattgattttagctagctcgtatttgaatttttcttttttatggaaaagtaattttttatatatacgatataattttttttaaaaaaatattcagttgatcacctttcatttatttcggagttaagagataaaaaggggttcaatttaaatattttcttccaaaaagtatggcaaaaataattttttttgtacatatataaattgttgaatcgtctagatattacatataacttctaagaatatatatagagtaataaaattttttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73273" stop="72076"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72973" g_stop="72376" g_length="598"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="598" r_length="598" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E231904" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>598</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E231904" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72973" e_stop="72376"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTT</genome_strand>
        <mrna_strand>CTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTTCAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTATGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTTAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E235498" ref_strand="+" ref_description="SGN-E235498 [cLED-11-K14]">
      <seq>ctaatgggattattagtaataatccaatttcctcacaagtacaagaagatttcaatgatgtaagttctttctcttattttccacccttatatacggtatatgagcttatccgaatcgatatgatcagtgaaaattcatattatcgatttgagatttcacttctttcaaaaacaaaaaaaaattagctagtgagaagattttgtaattagtaaaaaaaattctttgttaattctatttagcgataaattatcaaaatattttgtttgctatgaataataaagcaataatttcaatttgtttttgtgtttaggcctagtaattttttagcctattgattttagctagctcgtatttgaatttttcttttttatggaaaagtaattttttatatatacgatataattttttttaaaaaaatattcagttgatcacctttcatttatttcggagttaagagataaaaaggggttcaatttaaatattttcttccaaaaagtatggcaaaaataattttttttgtacatatataaattgttgaatcgtctagatattacatataacttctaagaatatatataga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73273" stop="72094"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72973" g_stop="72394" g_length="580"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="580" r_length="580" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E235498" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>580</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E235498" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72973" e_stop="72394"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGA</genome_strand>
        <mrna_strand>CTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTTAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E389747" ref_strand="+" ref_description="SGN-E389747 [TUS-4-C22]">
      <seq>ctttttctctctctctctcatcctcacaaagacaataaaaagaagaattttaagcaaaaaaaaaaatcaataaatcaaaggcaaaaaaatggagcaaaaaaatattttttttcttctttctcttatggttttactactaatttcctacacaacaacagctcgtttattgccaacaattaattctcaagaatctaatgggattattagtaataatccaatttcctcacaagtacaagaagatttcaatgatgtaagttctttctcttattttccacccttatatacggtatatgagcttatccgaatcgatatgatcagtgaaaattcatattatcgatttgagatttcacttctttcaaaaacaaaaaaaaattagctagtgagaagattttgtaattagtaaaaaaaattctttgttaattctatttagcgataaattatcaaaatattttgtttgctatgaataataaagcaataatttcaatttgtttttgtgtttaggcctagtaattttttagcctattgattttagctagctcgtatttgaatttttcttttttatggaaaagtaattttttatatatacgatataattttttttaaaaaaatattcagttgatcacctttcatttatttcggagttaagagataaaaaggggttcaatttaaatattttcttccaaaagtatggcaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73572" stop="72169"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73272" g_stop="73085" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="188" r_length="188" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73084" i_stop="72977" i_length="108">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72976" g_stop="72469" g_length="508"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="695" r_length="507" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E389747" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>696</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E389747" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73272" e_stop="73085"/>
          <exon e_start="72976" e_stop="72469"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGCAAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAGGTATTGATTTTTTTTTATTTTAAATTTTTTAATGAATTTCTATAGAGCTTCAAAAATTAAATTATTGTTGAATAGTAATTAATTAATTAATTATTATTTTTTTCACAGAATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAA</genome_strand>
        <mrna_strand>CTTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGCAAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAG............................................................................................................AATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTTAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCC-AAAAGTATGGCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E368043" ref_strand="+" ref_description="SGN-E368043 [TUS-22-N17]">
      <seq>ctaatgggattattagtaataatccaatttcctcacaagtacaagaagatttcaatgatgtaagttctttctcttattttccacccttatatacggtatatgagcttatccgaatcgatatgatcagtgaaaattcatattatcgatttgagatttcacttctttcaaaaacaaaaaaaaattagctagtgagaagattttgtaattagtaaaaaaaattctttgttaattctatttagcgataaattatcaaaatattttgtttgctatgaataataaagcaataatttcaatttgtttttgtgtttaggcctagtaattttttagcctattgattttagctagctcgtatttgaatttttcttttttatggaaaagtaattttttatatatacgatataattttttttaaaaaaatattcagttgatcacctttcatttatttcggagttaagagataaaaaggggttcaatttaaatattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73273" stop="72190"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72973" g_stop="72490" g_length="484"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="484" r_length="484" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E368043" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E368043" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72973" e_stop="72490"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTT</genome_strand>
        <mrna_strand>CTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTTAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E240808" ref_strand="+" ref_description="SGN-E240808 [cLED-24-F9]">
      <seq>ctaatgggattattagtaataatccaatttcctcacaagtacaagaagatttcaatgatgtaagttctttctcttattttccacccttatatacggtatatgagcttatccgaatcgatatgatcagtgaaaattcatattatcgatttgagatttcacttctttcaaaaacaaaaaaaaattagctagtgagaagattttgtaattagtaaaaaaaattctttgttaattctatttagcgataaattatcaaaatattttgtttgctatgaataataaagcaataatttcaatttgtttttgtgtttaggcctagtaattttttagcctattgattttagctagctcgtatttgaatttttcttttttatggaaaagtaattttttatatatacgatataattttttttaaaaaaatattcagttgatcacctttcattta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73273" stop="72232"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72973" g_stop="72532" g_length="442"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="442" r_length="442" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E240808" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>442</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E240808" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72973" e_stop="72532"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTA</genome_strand>
        <mrna_strand>CTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTTAAAAAAATATTCAGTTGATCACCTTTCATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E550301" ref_strand="+" ref_description="SGN-E550301 [TUS-5-C34]">
      <seq>ctttttctctctctctctcatcctcacaaagacaataaaaagaagaattttaagcaaaaaaaaaaatcaataaatcaaaggcaaaaaaatggagcaaaaaaatattttttttcttctttctcttatggttttactactaatttcctacacaacaacagctcgtttattgccaacaattaattctcaagaatctaatgggattattagtaataatccaatttcctcacaagtacaagaagatttcaatgatgtaagttctttctcttattttccacccttatatacggtatatgagcttatccgaatcgatatgatcagtgaaaattcatattatcgatttgagatttcacttctttcaaaaacaaaaaaaaattagctagtgagaagattttgtaattagtaaaaaaaattctttgttaattctatttagcgataaattatcaaaatattttgtttgctatgaataataaagcaataatttcaatttgtttttgtgtttaggcctagtaattttttagcctattgattttagctagctcgtatttgaatttttcttttttatggaaaagtaattttttatatatacgatataattttttttaaaaaaatattcagttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73572" stop="72245"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73272" g_stop="73085" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="188" r_length="188" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73084" i_stop="72977" i_length="108">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72976" g_stop="72545" g_length="432"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="620" r_length="432" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E550301" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>620</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E550301" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73272" e_stop="73085"/>
          <exon e_start="72976" e_stop="72545"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGCAAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAGGTATTGATTTTTTTTTATTTTAAATTTTTTAATGAATTTCTATAGAGCTTCAAAAATTAAATTATTGTTGAATAGTAATTAATTAATTAATTATTATTTTTTTCACAGAATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGAT</genome_strand>
        <mrna_strand>CTTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGCAAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAG............................................................................................................AATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTTAAAAAAATATTCAGTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E392207" ref_strand="+" ref_description="SGN-E392207 [TUS-36-A14]">
      <seq>tctaatgggattattagtaataatccaatttcctcacaagtacaagaagatttcaatgatgtaagttctttctcttattttccacccttatatacggtatatgagcttatccgaatcgatatgatcagtgaaaattcatattatcgatttgagatttcacttctttcaaaaacaaaaaaaaattagctagtgagaagattttgtaattagtaaaaaaaattctttgttaattctatttagcgataaattatcaaaatattttgtttgctatgaataataaagcaataatttcaatttgtttttgtgtttaggcctagtaattttttagcctattgattttagctagctcgtatttgaatttttcttttttatggaaaagtaattttttatatatacgatataattttttttaagaggggggggggggggggcctttcttttatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73274" stop="72260"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72974" g_stop="72565" g_length="410"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="410" r_length="410" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E392207" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>410</cumulative_length_of_scored_exons>
        <coverage percentage="0.923" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E392207" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72974" e_stop="72565"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTT</genome_strand>
        <mrna_strand>TCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E550200" ref_strand="+" ref_description="SGN-E550200 [TUS-5-H11]">
      <seq>tctaatgggattattagtaataatccaatttcctcacgagtacaagaagatttcaatgatgtaagttctttctcttattttccacccttatatacggaatatgagcttatccgaatcgatatgatcagtgaaaattcatattatcgatttgagatttcacttctttcaaaaacaaaaaaaaattagctagtgagaagattttgtaattagtaaaaaaaattctttgttaattctatttagcgataaattatcaaaatattttgtttgctatgaataataaagcaataatttcaatttgtttttgtgttgaggcctagtaattttttagcctattgattttagctagctcgtatttgaatttttcttttttatggaaaagtaattttttatatatacgatataat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73274" stop="72271"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72974" g_stop="72571" g_length="404"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="404" r_length="404" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E550200" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>404</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E550200" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72974" e_stop="72571"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAAT</genome_strand>
        <mrna_strand>TCTAATGGGATTATTAGTAATAATCCAATTTCCTCACGAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGAATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTGAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E231517" ref_strand="+" ref_description="SGN-E231517 [cLED-4-D9]">
      <seq>tttttctctctctctctcatcctcacaaagacaataaaaagaagaattttaagcaaaaaaaaaaatcaataaatcaaaggcaaaaaaatggagcaaaaaaatattttttttcttctttctcttatggttttactactaatttcctacacaacaacagctcgtttattgccaacaattaattctcaagaatctaatgggattattagtaataatccaatttcctcacaagtacaagaagatttcaatgatgtaagttctttctcttattttccacccttatatacggtatatgagcttatccgaatcgatatgatcagtgaaaattcatattatcgatttgagatttcacttctttcaaaaacaaaaaaaaattagctagtgagaagattttgtaattagtaaaaaaaattctttgttaattctatttagcgataaattatcaaaatattttgtttgctatgaataataaagcaataatttcaatttgtttttgtgtttaggcctagtaatttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09SLm0129J22-AMLdt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09SLm0129J22.1" temp_strand="-" temp_description="C09SLm0129J22.1  EF692493.1 htgs_phase:2 submitted_to_sgn_as:C09SLm0129J22 upload_account_name:spain">
        <position start="73571" stop="72349"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73271" g_stop="73085" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="187" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73084" i_stop="72977" i_length="108">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72976" g_stop="72649" g_length="328"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="515" r_length="328" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09SLm0129J22.1" gen_strand="-" ref_id="SGN-E231517" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09SLm0129J22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E231517" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73271" e_stop="73085"/>
          <exon e_start="72976" e_stop="72649"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGCAAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAGGTATTGATTTTTTTTTATTTTAAATTTTTTAATGAATTTCTATAGAGCTTCAAAAATTAAATTATTGTTGAATAGTAATTAATTAATTAATTATTATTTTTTTCACAGAATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTT</genome_strand>
        <mrna_strand>TTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGCAAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAG............................................................................................................AATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>102</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="295" PGL_stop="1026"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="295" e_stop="337"/>
            <exon e_start="425" e_stop="1026"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.985" acc_prob="0.001" e_score="0.953"/>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.953">
            <gDNA_exon_boundary e_start="295" e_stop="337" e_length="43"/>
          </exon>
          <intron i_serial="1" don_prob="0.985" acc_prob="0.001">
            <gDNA_intron_boundary i_start="338" i_stop="424" i_length="87"/>
          </intron>
          <exon e_serial="2" e_score="0.988">
            <gDNA_exon_boundary e_start="425" e_stop="1026" e_length="602"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="295" stop="337"/>
              <exon start="425" stop="1026"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376858" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="567" stop="1026"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227040" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTTGTTGCTGGCATCGTCTTTTAGTTTACCTTGTGGTATAAG : CTCTGTGGTTCCATACTTTTACCCCATATATCTTCTCATTCTACTCATATGGAGGGAGAGAAGGGACGAAGCTAGATGTGCAGAGAAGTACAAAGATGTGTGGGCTGAATACCGTAAACTTGTTCCTTACAGGATCTTACCTTACGTTTACTAGCTCAATCGTTTGTCCACGTTGCTTGTGCATTAGAGTCAGAATTAGCCTCACTGTACCGCACTACCCAAGCATGAGAAGGGACGAACTCATGAATGAATATTACATCAAATTCGAGCTTTTGCCCTATCTATGCAGCTTTCTCATCTCCTCTACGAAAGTAATCTTTTAATCTATTTCAGTTAGGATCAACACTGTATCCAGGTTGTAACTGATTGCTTAGCTTTTGAAAGTTTTTCCAGAACCAACTTGTACACTAGATGTACTTTATCATGGCAGGATTTAAATGTGCTGCTTGTATTGAATGCCAACTATGGAATTATTTTTCATGGTTTGTAATCTTGGAGCAGCTTACTAATGTGTGCTGAAATTTTCGAATGATTTTCCCGACTTTCTAGTTTTTTGTATGCACCTTGACTAATTTCAGGAGATATTTGCTACGTTCCACCAG</gDNA_template>
            <first_frame> I  C  C  W  H  R  L  L  V  Y  L  V  V  *   : A  L  W  F  H  T  F  T  P  Y  I  F  S  F  Y  S  Y  G  G  R  E  G  T  K  L  D  V  Q  R  S  T  K  M  C  G  L  N  T  V  N  L  F  L  T  G  S  Y  L  T  F  T  S  S  I  V  C  P  R  C  L  C  I  R  V  R  I  S  L  T  V  P  H  Y  P  S  M  R  R  D  E  L  M  N  E  Y  Y  I  K  F  E  L  L  P  Y  L  C  S  F  L  I  S  S  T  K  V  I  F  *  S  I  S  V  R  I  N  T  V  S  R  L  *  L  I  A  *  L  L  K  V  F  P  E  P  T  C  T  L  D  V  L  Y  H  G  R  I  *  M  C  C  L  Y  *  M  P  T  M  E  L  F  F  M  V  C  N  L  G  A  A  Y  *  C  V  L  K  F  S  N  D  F  P  D  F  L  V  F  C  M  H  L  D  *  F  Q  E  I  F  A  T  F  H  Q </first_frame>
            <second_frame>  F  V  A  G  I  V  F  *  F  T  L  W  Y  K  :  L  C  G  S  I  L  L  P  H  I  S  S  H  S  T  H  M  E  G  E  K  G  R  S  *  M  C  R  E  V  Q  R  C  V  G  *  I  P  *  T  C  S  L  Q  D  L  T  L  R  L  L  A  Q  S  F  V  H  V  A  C  A  L  E  S  E  L  A  S  L  Y  R  T  T  Q  A  *  E  G  T  N  S  *  M  N  I  T  S  N  S  S  F  C  P  I  Y  A  A  F  S  S  P  L  R  K  *  S  F  N  L  F  Q  L  G  S  T  L  Y  P  G  C  N  *  L  L  S  F  *  K  F  F  Q  N  Q  L  V  H  *  M  Y  F  I  M  A  G  F  K  C  A  A  C  I  E  C  Q  L  W  N  Y  F  S  W  F  V  I  L  E  Q  L  T  N  V  C  *  N  F  R  M  I  F  P  T  F  *  F  F  V  C  T  L  T  N  F  R  R  Y  L  L  R  S  T   </second_frame>
            <third_frame>   L  L  L  A  S  S  F  S  L  P  C  G  I  S :   S  V  V  P  Y  F  Y  P  I  Y  L  L  I  L  L  I  W  R  E  R  R  D  E  A  R  C  A  E  K  Y  K  D  V  W  A  E  Y  R  K  L  V  P  Y  R  I  L  P  Y  V  Y  *  L  N  R  L  S  T  L  L  V  H  *  S  Q  N  *  P  H  C  T  A  L  P  K  H  E  K  G  R  T  H  E  *  I  L  H  Q  I  R  A  F  A  L  S  M  Q  L  S  H  L  L  Y  E  S  N  L  L  I  Y  F  S  *  D  Q  H  C  I  Q  V  V  T  D  C  L  A  F  E  S  F  S  R  T  N  L  Y  T  R  C  T  L  S  W  Q  D  L  N  V  L  L  V  L  N  A  N  Y  G  I  I  F  H  G  L  *  S  W  S  S  L  L  M  C  A  E  I  F  E  *  F  S  R  L  S  S  F  L  Y  A  P  *  L  I  S  G  D  I  C  Y  V  P  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09SLm0129J22.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="337" stop="747"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>321</number_coding_nucleotides>
                  <number_encoded_amino_acids>107</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ALWFHTFTPYIFSFYSYGGREGTKLDVQRSTKMCGLNTVNLFLTGSYLTFTSSIVCPRCLCIRVRISLTVPHYPSMRRDELMNEYYIKFELLPYLCSFLISSTKVIF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="16087" PGL_stop="16833"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16087" e_stop="16165"/>
            <exon e_start="16615" e_stop="16833"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.982" acc_prob="0.751" e_score="0.962"/>
          <exon-only e_score="0.936"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.962">
            <gDNA_exon_boundary e_start="16087" e_stop="16165" e_length="79"/>
          </exon>
          <intron i_serial="1" don_prob="0.982" acc_prob="0.751">
            <gDNA_intron_boundary i_start="16166" i_stop="16614" i_length="449"/>
          </intron>
          <exon e_serial="2" e_score="0.936">
            <gDNA_exon_boundary e_start="16615" e_stop="16833" e_length="219"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16087" stop="16165"/>
              <exon start="16615" stop="16833"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477349" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATACTCAGTTTCATTTTTTTCCTTTAATTTGCCGTCCACTGCCTCTGTAAGATCTCCGGCAGAATTTCATTTATTCAG : GATGATTTCATAGAACAGTTTTATTTGTTTTTTTCTATGAGAGACTTCTTTGAGTTTATCCCTGCAAACATCTGCTTATCATTTCTGTCAAATTAAGAGATAAAGGCAGAAAGATTGGATTCTTACCGGTCACTGCCGCGGCAGTATGGCCGGAAGGGAAGGAAGCTTGATTCCACAGGCAGATGATTTTCAGATTGGAACTTCATGGTTTCCAATGAC</gDNA_template>
            <first_frame> N  T  Q  F  H  F  F  P  L  I  C  R  P  L  P  L  *  D  L  R  Q  N  F  I  Y  S   : G  *  F  H  R  T  V  L  F  V  F  F  Y  E  R  L  L  *  V  Y  P  C  K  H  L  L  I  I  S  V  K  L  R  D  K  G  R  K  I  G  F  L  P  V  T  A  A  A  V  W  P  E  G  K  E  A  *  F  H  R  Q  M  I  F  R  L  E  L  H  G  F  Q  *  </first_frame>
            <second_frame>  I  L  S  F  I  F  F  L  *  F  A  V  H  C  L  C  K  I  S  G  R  I  S  F  I  Q  :  D  D  F  I  E  Q  F  Y  L  F  F  S  M  R  D  F  F  E  F  I  P  A  N  I  C  L  S  F  L  S  N  *  E  I  K  A  E  R  L  D  S  Y  R  S  L  P  R  Q  Y  G  R  K  G  R  K  L  D  S  T  G  R  *  F  S  D  W  N  F  M  V  S  N  D </second_frame>
            <third_frame>   Y  S  V  S  F  F  S  F  N  L  P  S  T  A  S  V  R  S  P  A  E  F  H  L  F  R :   M  I  S  *  N  S  F  I  C  F  F  L  *  E  T  S  L  S  L  S  L  Q  T  S  A  Y  H  F  C  Q  I  K  R  *  R  Q  K  D  W  I  L  T  G  H  C  R  G  S  M  A  G  R  E  G  S  L  I  P  Q  A  D  D  F  Q  I  G  T  S  W  F  P  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09SLm0129J22.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="21985" PGL_stop="24540"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="21985" e_stop="22113"/>
            <exon e_start="22238" e_stop="22317"/>
            <exon e_start="22404" e_stop="22488"/>
            <exon e_start="22569" e_stop="22660"/>
            <exon e_start="22736" e_stop="22804"/>
            <exon e_start="23102" e_stop="23138"/>
            <exon e_start="23222" e_stop="23304"/>
            <exon e_start="23748" e_stop="24212"/>
            <exon e_start="24340" e_stop="24376"/>
            <exon e_start="24497" e_stop="24540"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.973" acc_prob="0.871" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.949" e_score="1.000"/>
          <exon-intron don_prob="0.945" acc_prob="0.839" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="0.963" e_score="1.000"/>
          <exon-intron don_prob="0.964" acc_prob="0.889" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.470" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.791" acc_prob="0.975" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="21985" e_stop="22113" e_length="129"/>
          </exon>
          <intron i_serial="1" don_prob="0.973" acc_prob="0.871">
            <gDNA_intron_boundary i_start="22114" i_stop="22237" i_length="124"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="22238" e_stop="22317" e_length="80"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.949">
            <gDNA_intron_boundary i_start="22318" i_stop="22403" i_length="86"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="22404" e_stop="22488" e_length="85"/>
          </exon>
          <intron i_serial="3" don_prob="0.945" acc_prob="0.839">
            <gDNA_intron_boundary i_start="22489" i_stop="22568" i_length="80"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="22569" e_stop="22660" e_length="92"/>
          </exon>
          <intron i_serial="4" don_prob="0.979" acc_prob="0.963">
            <gDNA_intron_boundary i_start="22661" i_stop="22735" i_length="75"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="22736" e_stop="22804" e_length="69"/>
          </exon>
          <intron i_serial="5" don_prob="0.964" acc_prob="0.889">
            <gDNA_intron_boundary i_start="22805" i_stop="23101" i_length="297"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="23102" e_stop="23138" e_length="37"/>
          </exon>
          <intron i_serial="6" don_prob="0.974" acc_prob="0.470">
            <gDNA_intron_boundary i_start="23139" i_stop="23221" i_length="83"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="23222" e_stop="23304" e_length="83"/>
          </exon>
          <intron i_serial="7" don_prob="0.983" acc_prob="0.999">
            <gDNA_intron_boundary i_start="23305" i_stop="23747" i_length="443"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="23748" e_stop="24212" e_length="465"/>
          </exon>
          <intron i_serial="8" don_prob="0.791" acc_prob="0.975">
            <gDNA_intron_boundary i_start="24213" i_stop="24339" i_length="127"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="24340" e_stop="24376" e_length="37"/>
          </exon>
          <intron i_serial="9" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="24377" i_stop="24496" i_length="120"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="24497" e_stop="24540" e_length="44"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21985" stop="22113"/>
              <exon start="22238" stop="22317"/>
              <exon start="22404" stop="22488"/>
              <exon start="22569" stop="22660"/>
              <exon start="22736" stop="22804"/>
              <exon start="23102" stop="23134"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325216" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21999" stop="22113"/>
              <exon start="22238" stop="22317"/>
              <exon start="22404" stop="22488"/>
              <exon start="22569" stop="22660"/>
              <exon start="22736" stop="22804"/>
              <exon start="23102" stop="23134"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22023" stop="22113"/>
              <exon start="22238" stop="22317"/>
              <exon start="22404" stop="22488"/>
              <exon start="22569" stop="22660"/>
              <exon start="22736" stop="22804"/>
              <exon start="23102" stop="23138"/>
              <exon start="23222" stop="23304"/>
              <exon start="23748" stop="24002"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E423085" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22023" stop="22113"/>
              <exon start="22238" stop="22317"/>
              <exon start="22404" stop="22488"/>
              <exon start="22569" stop="22660"/>
              <exon start="22736" stop="22804"/>
              <exon start="23102" stop="23138"/>
              <exon start="23222" stop="23304"/>
              <exon start="23748" stop="23813"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449705" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22594" stop="22660"/>
              <exon start="22736" stop="22804"/>
              <exon start="23102" stop="23138"/>
              <exon start="23222" stop="23304"/>
              <exon start="23748" stop="24212"/>
              <exon start="24340" stop="24376"/>
              <exon start="24497" stop="24540"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E553964" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAGAGAAAAGACAGCAAACACAATGGATTCACTAGACTGGGACGCAGTGAGGTGTGCAGATGTCAATGAGATATCCCATACCATTAGAGAACGGGGGATGAACAATATGCTAGCAGAGAGAATCAAG : GATTTCCTTAATCGGATTTTTAGAGAACATGGAAGTATTGATCTTGAATGGCTGAGAGACGTTCCACCAGACAAAGCAAA : AGAGTATCTACTAAGCATCAGGGGCTTGGGCCTGAAGAGCGTAGAGTGTGTGCGACTTTTAACACTTCACAACCTTGCTTTTCCG : GTCGACACAAATGTTGGGCGTATAGCTGTTAGACTGGGATGGGTGCCCCTGCAGCCACTGCCAGAGTCACTACAATTGCATCTTCTGGAATT : GTACCCTGTGCTGGAGTCAATTCAAAAATACCTCTGGCCACGTCTCTGCAAGCTTGATCAAAGAACATT : ATATGAGTTGCATTACCATATGATCACTTTTGGAAAG : GTCTTCTGTTCAAAAAGCAAACCCAACTGCAACGCATGTCCAATGAGAGGAGAATGCAGACACTTCGCAAGTGCTTTTGCAAG : CGCAAGGCTTGCCCTGCCAGCACCAGAAGAGAAAAGTATAGTGAGTGCAACAGAGAACAATGCAGCTGACCAGAATCCATTCCAGAACTTCAATCAACAGCCGCTAACCTTACCCCAGGCTAATCAAACACCTTTAGAGCATCCCAAATTGATCAACTCCGCACCTATTATTGAGGTGCCAGCAACACCACAGCCCATTGTCGAAGAGCCTGCCTCACCTGAGCCAGAGCAAGATGCTCCCGAAATCGACATTGAAGATGTTTGCTTTGAAGATCCTGATGAAATTCCTACAATTGAATTGAATATGGCGCAGTTCACTCAAAATGTGAAGAACTTTGTGCAAAACAATATGGAGCTTCAACAGGTCGAAATGTCAAAAGCCTTAGTAGCTTTAACTCCAGCAGCTGCTTCAATTCCTACACCTAAACTTAAGCATATAAGCCGGCTCAGAACTGAACATCAAGT : ATATGAACTTCCAGATTCTCATCCTCTTCTTGAAGGG : TTCGAGAAAAGAGAACCAGATGATCCATCCTCCTATCTTCTGGC</gDNA_template>
            <first_frame> K  R  E  K  T  A  N  T  M  D  S  L  D  W  D  A  V  R  C  A  D  V  N  E  I  S  H  T  I  R  E  R  G  M  N  N  M  L  A  E  R  I  K  :  D  F  L  N  R  I  F  R  E  H  G  S  I  D  L  E  W  L  R  D  V  P  P  D  K  A  K :   E  Y  L  L  S  I  R  G  L  G  L  K  S  V  E  C  V  R  L  L  T  L  H  N  L  A  F  P  :  V  D  T  N  V  G  R  I  A  V  R  L  G  W  V  P  L  Q  P  L  P  E  S  L  Q  L  H  L  L  E  L :   Y  P  V  L  E  S  I  Q  K  Y  L  W  P  R  L  C  K  L  D  Q  R  T  L :   Y  E  L  H  Y  H  M  I  T  F  G  K  :  V  F  C  S  K  S  K  P  N  C  N  A  C  P  M  R  G  E  C  R  H  F  A  S  A  F  A  S :   A  R  L  A  L  P  A  P  E  E  K  S  I  V  S  A  T  E  N  N  A  A  D  Q  N  P  F  Q  N  F  N  Q  Q  P  L  T  L  P  Q  A  N  Q  T  P  L  E  H  P  K  L  I  N  S  A  P  I  I  E  V  P  A  T  P  Q  P  I  V  E  E  P  A  S  P  E  P  E  Q  D  A  P  E  I  D  I  E  D  V  C  F  E  D  P  D  E  I  P  T  I  E  L  N  M  A  Q  F  T  Q  N  V  K  N  F  V  Q  N  N  M  E  L  Q  Q  V  E  M  S  K  A  L  V  A  L  T  P  A  A  A  S  I  P  T  P  K  L  K  H  I  S  R  L  R  T  E  H  Q  V :   Y  E  L  P  D  S  H  P  L  L  E  G  :  F  E  K  R  E  P  D  D  P  S  S  Y  L  L   </first_frame>
            <second_frame>  K  E  K  R  Q  Q  T  Q  W  I  H  *  T  G  T  Q  *  G  V  Q  M  S  M  R  Y  P  I  P  L  E  N  G  G  *  T  I  C  *  Q  R  E  S  R :   I  S  L  I  G  F  L  E  N  M  E  V  L  I  L  N  G  *  E  T  F  H  Q  T  K  Q   : K  S  I  Y  *  A  S  G  A  W  A  *  R  A  *  S  V  C  D  F  *  H  F  T  T  L  L  F  R :   S  T  Q  M  L  G  V  *  L  L  D  W  D  G  C  P  C  S  H  C  Q  S  H  Y  N  C  I  F  W  N   : C  T  L  C  W  S  Q  F  K  N  T  S  G  H  V  S  A  S  L  I  K  E  H   : Y  M  S  C  I  T  I  *  S  L  L  E  R :   S  S  V  Q  K  A  N  P  T  A  T  H  V  Q  *  E  E  N  A  D  T  S  Q  V  L  L  Q   : A  Q  G  L  P  C  Q  H  Q  K  R  K  V  *  *  V  Q  Q  R  T  M  Q  L  T  R  I  H  S  R  T  S  I  N  S  R  *  P  Y  P  R  L  I  K  H  L  *  S  I  P  N  *  S  T  P  H  L  L  L  R  C  Q  Q  H  H  S  P  L  S  K  S  L  P  H  L  S  Q  S  K  M  L  P  K  S  T  L  K  M  F  A  L  K  I  L  M  K  F  L  Q  L  N  *  I  W  R  S  S  L  K  M  *  R  T  L  C  K  T  I  W  S  F  N  R  S  K  C  Q  K  P  *  *  L  *  L  Q  Q  L  L  Q  F  L  H  L  N  L  S  I  *  A  G  S  E  L  N  I  K   : Y  M  N  F  Q  I  L  I  L  F  L  K  G :   S  R  K  E  N  Q  M  I  H  P  P  I  F  W  </second_frame>
            <third_frame>   K  R  K  D  S  K  H  N  G  F  T  R  L  G  R  S  E  V  C  R  C  Q  *  D  I  P  Y  H  *  R  T  G  D  E  Q  Y  A  S  R  E  N  Q   : G  F  P  *  S  D  F  *  R  T  W  K  Y  *  S  *  M  A  E  R  R  S  T  R  Q  S  K  :  R  V  S  T  K  H  Q  G  L  G  P  E  E  R  R  V  C  A  T  F  N  T  S  Q  P  C  F  S   : G  R  H  K  C  W  A  Y  S  C  *  T  G  M  G  A  P  A  A  T  A  R  V  T  T  I  A  S  S  G  I  :  V  P  C  A  G  V  N  S  K  I  P  L  A  T  S  L  Q  A  *  S  K  N  I  :  I  *  V  A  L  P  Y  D  H  F  W  K   : G  L  L  F  K  K  Q  T  Q  L  Q  R  M  S  N  E  R  R  M  Q  T  L  R  K  C  F  C  K  :  R  K  A  C  P  A  S  T  R  R  E  K  Y  S  E  C  N  R  E  Q  C  S  *  P  E  S  I  P  E  L  Q  S  T  A  A  N  L  T  P  G  *  S  N  T  F  R  A  S  Q  I  D  Q  L  R  T  Y  Y  *  G  A  S  N  T  T  A  H  C  R  R  A  C  L  T  *  A  R  A  R  C  S  R  N  R  H  *  R  C  L  L  *  R  S  *  *  N  S  Y  N  *  I  E  Y  G  A  V  H  S  K  C  E  E  L  C  A  K  Q  Y  G  A  S  T  G  R  N  V  K  S  L  S  S  F  N  S  S  S  C  F  N  S  Y  T  *  T  *  A  Y  K  P  A  Q  N  *  T  S  S  :  I  *  T  S  R  F  S  S  S  S  *  R   : V  R  E  K  R  T  R  *  S  I  L  L  S  S  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09SLm0129J22.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="21985" stop="22113"/>
                    <exon start="22238" stop="22317"/>
                    <exon start="22404" stop="22488"/>
                    <exon start="22569" stop="22660"/>
                    <exon start="22736" stop="22804"/>
                    <exon start="23102" stop="23138"/>
                    <exon start="23222" stop="23304"/>
                    <exon start="23748" stop="24212"/>
                    <exon start="24340" stop="24376"/>
                    <exon start="24497" stop="24538"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1119</number_coding_nucleotides>
                  <number_encoded_amino_acids>373</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KREKTANTMDSLDWDAVRCADVNEISHTIRERGMNNMLAERIKDFLNRIFREHGSIDLEWLRDVPPDKAKEYLLSIRGLGLKSVECVRLLTLHNLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQRTLYELHYHMITFGKVFCSKSKPNCNACPMRGECRHFASAFASARLALPAPEEKSIVSATENNAADQNPFQNFNQQPLTLPQANQTPLEHPKLINSAPIIEVPATPQPIVEEPASPEPEQDAPEIDIEDVCFEDPDEIPTIELNMAQFTQNVKNFVQNNMELQQVEMSKALVALTPAAASIPTPKLKHISRLRTEHQVYELPDSHPLLEGFEKREPDDPSSYLL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="29263" PGL_stop="23886"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29181" e_stop="29022"/>
            <exon e_start="27005" e_stop="26940"/>
            <exon e_start="25149" e_stop="24776"/>
            <exon e_start="24588" e_stop="24394"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.977" acc_prob="0.855" e_score="0.925"/>
          <exon-intron don_prob="0.956" acc_prob="0.000" e_score="0.955"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.949"/>
          <exon-only e_score="0.892"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.925">
            <gDNA_exon_boundary e_start="29181" e_stop="29022" e_length="160"/>
          </exon>
          <intron i_serial="1" don_prob="0.977" acc_prob="0.855">
            <gDNA_intron_boundary i_start="29021" i_stop="27006" i_length="2016"/>
          </intron>
          <exon e_serial="2" e_score="0.955">
            <gDNA_exon_boundary e_start="27005" e_stop="26940" e_length="66"/>
          </exon>
          <intron i_serial="2" don_prob="0.956" acc_prob="0.000">
            <gDNA_intron_boundary i_start="26939" i_stop="25150" i_length="1790"/>
          </intron>
          <exon e_serial="3" e_score="0.949">
            <gDNA_exon_boundary e_start="25149" e_stop="24776" e_length="374"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="24775" i_stop="24589" i_length="187"/>
          </intron>
          <exon e_serial="4" e_score="0.892">
            <gDNA_exon_boundary e_start="24588" e_stop="24394" e_length="195"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29181" stop="29022"/>
              <exon start="27005" stop="26940"/>
              <exon start="25149" stop="24776"/>
              <exon start="24588" stop="24394"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E425832" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29181" stop="29022"/>
              <exon start="27005" stop="26940"/>
              <exon start="25149" stop="24776"/>
              <exon start="24588" stop="24535"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455448" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29153" stop="29022"/>
              <exon start="27005" stop="26940"/>
              <exon start="25149" stop="24776"/>
              <exon start="24588" stop="24426"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E425833" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATGGATATACTTCGAAATCTCTATATTGAGCTACGATATTCAGCTTCTCATGATTGTTCTGAAGTTCTCCAGGAGCGTTGTTGATTTGGATTGATGTTTCAACTTGAATATGCAGCATCGGTATGACTATTTGAGATCTCTTTCATTGATGCTTTTGAG : AGGTTGAGAGATGTCTCCATGCTCTTCCGATGACAGTTAATAAGGTTTTCTCAGCTTCAAACAAAG : AATTGTCCCTCTCACAGTTTGTGCATGTGCTTCACGTATGCTGTTGCATGCAAAACATGTTTCATCATCACATAGTCTACCAGTTTCTTGGGAGTTGCATTGTCTTCCCGGTGGCTGAATAGAATCCGAAGTTTCACCTGATACGGGTTTGGTACATAAGGGAGTATTAATCTATAGAGAGACTGATGAAAAGCTTGACCTATTTAGCGCAATTACCCTCTACTACTGCAGTGCAACTACTACTGAGATTGGAACCTGGGACTTGCTCAGTCCAGCTTAGCTATGCAGAAGTGTTCCTTACAATCATGAGTTCTCTAATTAATCAGCTTACAGATAGGAACCGGTTACTTTGCATTGTTTTCAAAAGGGCTCCT : CTTATGTGCTATATTACATTAATTGAAATCTTACCAGGTGTCCATATTGCCAGAAGATAGGAGGATGGATCATCTGGTTCTCTTTTCTCGAACTGCAACATGAAAAGATGTAATTATCAGGAGGATCAATTTAAATATAAGCTTACATGCTGCTTATATATGGATTTACAACTTAGTATTTAACCAATCAAAAAT</gDNA_template>
            <first_frame> H  G  Y  T  S  K  S  L  Y  *  A  T  I  F  S  F  S  *  L  F  *  S  S  P  G  A  L  L  I  W  I  D  V  S  T  *  I  C  S  I  G  M  T  I  *  D  L  F  H  *  C  F  *   : E  V  E  R  C  L  H  A  L  P  M  T  V  N  K  V  F  S  A  S  N  K   : E  L  S  L  S  Q  F  V  H  V  L  H  V  C  C  C  M  Q  N  M  F  H  H  H  I  V  Y  Q  F  L  G  S  C  I  V  F  P  V  A  E  *  N  P  K  F  H  L  I  R  V  W  Y  I  R  E  Y  *  S  I  E  R  L  M  K  S  L  T  Y  L  A  Q  L  P  S  T  T  A  V  Q  L  L  L  R  L  E  P  G  T  C  S  V  Q  L  S  Y  A  E  V  F  L  T  I  M  S  S  L  I  N  Q  L  T  D  R  N  R  L  L  C  I  V  F  K  R  A  P  :  L  M  C  Y  I  T  L  I  E  I  L  P  G  V  H  I  A  R  R  *  E  D  G  S  S  G  S  L  F  S  N  C  N  M  K  R  C  N  Y  Q  E  D  Q  F  K  Y  K  L  T  C  C  L  Y  M  D  L  Q  L  S  I  *  P  I  K  N </first_frame>
            <second_frame>  M  D  I  L  R  N  L  Y  I  E  L  R  Y  S  A  S  H  D  C  S  E  V  L  Q  E  R  C  *  F  G  L  M  F  Q  L  E  Y  A  A  S  V  *  L  F  E  I  S  F  I  D  A  F  E  :  R  L  R  D  V  S  M  L  F  R  *  Q  L  I  R  F  S  Q  L  Q  T  K  :  N  C  P  S  H  S  L  C  M  C  F  T  Y  A  V  A  C  K  T  C  F  I  I  T  *  S  T  S  F  L  G  V  A  L  S  S  R  W  L  N  R  I  R  S  F  T  *  Y  G  F  G  T  *  G  S  I  N  L  *  R  D  *  *  K  A  *  P  I  *  R  N  Y  P  L  L  L  Q  C  N  Y  Y  *  D  W  N  L  G  L  A  Q  S  S  L  A  M  Q  K  C  S  L  Q  S  *  V  L  *  L  I  S  L  Q  I  G  T  G  Y  F  A  L  F  S  K  G  L  L :   L  C  A  I  L  H  *  L  K  S  Y  Q  V  S  I  L  P  E  D  R  R  M  D  H  L  V  L  F  S  R  T  A  T  *  K  D  V  I  I  R  R  I  N  L  N  I  S  L  H  A  A  Y  I  W  I  Y  N  L  V  F  N  Q  S  K   </second_frame>
            <third_frame>   W  I  Y  F  E  I  S  I  L  S  Y  D  I  Q  L  L  M  I  V  L  K  F  S  R  S  V  V  D  L  D  *  C  F  N  L  N  M  Q  H  R  Y  D  Y  L  R  S  L  S  L  M  L  L  R :   G  *  E  M  S  P  C  S  S  D  D  S  *  *  G  F  L  S  F  K  Q  R :   I  V  P  L  T  V  C  A  C  A  S  R  M  L  L  H  A  K  H  V  S  S  S  H  S  L  P  V  S  W  E  L  H  C  L  P  G  G  *  I  E  S  E  V  S  P  D  T  G  L  V  H  K  G  V  L  I  Y  R  E  T  D  E  K  L  D  L  F  S  A  I  T  L  Y  Y  C  S  A  T  T  T  E  I  G  T  W  D  L  L  S  P  A  *  L  C  R  S  V  P  Y  N  H  E  F  S  N  *  S  A  Y  R  *  E  P  V  T  L  H  C  F  Q  K  G  S   : S  Y  V  L  Y  Y  I  N  *  N  L  T  R  C  P  Y  C  Q  K  I  G  G  W  I  I  W  F  S  F  L  E  L  Q  H  E  K  M  *  L  S  G  G  S  I  *  I  *  A  Y  M  L  L  I  Y  G  F  T  T  *  Y  L  T  N  Q  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09SLm0129J22.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24979" stop="24776"/>
                    <exon start="24588" stop="24529"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>261</number_coding_nucleotides>
                  <number_encoded_amino_acids>87</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SIERLMKSLTYLAQLPSTTAVQLLLRLEPGTCSVQLSYAEVFLTIMSSLINQLTDRNRLLCIVFKRAPLMCYITLIEILPGVHIARR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="29263" e_stop="29022"/>
            <exon e_start="27520" e_stop="27400"/>
            <exon e_start="27005" e_stop="26940"/>
            <exon e_start="24169" e_stop="23886"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.977" acc_prob="0.690" e_score="0.921"/>
          <exon-intron don_prob="0.000" acc_prob="0.855" e_score="0.909"/>
          <exon-intron don_prob="0.956" acc_prob="0.916" e_score="0.924"/>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.921">
            <gDNA_exon_boundary e_start="29263" e_stop="29022" e_length="242"/>
          </exon>
          <intron i_serial="1" don_prob="0.977" acc_prob="0.690">
            <gDNA_intron_boundary i_start="29021" i_stop="27521" i_length="1501"/>
          </intron>
          <exon e_serial="2" e_score="0.909">
            <gDNA_exon_boundary e_start="27520" e_stop="27400" e_length="121"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.855">
            <gDNA_intron_boundary i_start="27399" i_stop="27006" i_length="394"/>
          </intron>
          <exon e_serial="3" e_score="0.924">
            <gDNA_exon_boundary e_start="27005" e_stop="26940" e_length="66"/>
          </exon>
          <intron i_serial="3" don_prob="0.956" acc_prob="0.916">
            <gDNA_intron_boundary i_start="26939" i_stop="24170" i_length="2770"/>
          </intron>
          <exon e_serial="4" e_score="0.986">
            <gDNA_exon_boundary e_start="24169" e_stop="23886" e_length="284"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29263" stop="29022"/>
              <exon start="27520" stop="27400"/>
              <exon start="27005" stop="26940"/>
              <exon start="24169" stop="23886"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E561136" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAAATTTTGTTGAAACAAATATATTAGCTCTGTATCTCTTCTCCGTCTCCAAACACTGAACAGTTTCATAATCCAATTCTACCATGGATATACTTCGAAATCTCTATATTGAGCTACGATATTCAGCTTCTCATGATTGTTCTGAAGTTCTCCAGGAGCGTTGTTGATTTGGATTGATGTTTCAACTTGAATATGCAGCATCGGTATGACTATTTGAGATCTCTTTCATTGATGCTTTTGAG : GTGTAGTCAGATTGAAGTTGTAACACAGTGATATAAACATCGATGGCAGTTTCTAGAGGAATCTGCGGTCAACAGCGGGATTTTGCAGTGAGATGCATGTTACTTTGCGAGGTGAATATAT : AGGTTGAGAGATGTCTCCATGCTCTTCCGATGACAGTTAATAAGGTTTTCTCAGCTTCAAACAAAG : GTGTAGGAATTGAAGCAGCTGCTGGAGTTAAAGCTACTAAGGCTTTTGACATTTCGACCTGTTGAAGCTCCATATTGTTTTGCACAAAGTTCTTCACATTTTGAGTGAACTGCGCCATATTCAATTCAATTGTAGGAATTTCATCAGGATCTTCAAAGCAAACATCTTCAATGTCGATTTCGGGAGCATCTTGCTCTGGCTCAGGTGAGGCAGGCTCTTCGACAATGGGCTGTGGTGTTGCTGGCACCTCAATAATAGGTGCGGAGTTGATCAATTTGGGATGC</gDNA_template>
            <first_frame> Q  I  L  L  K  Q  I  Y  *  L  C  I  S  S  P  S  P  N  T  E  Q  F  H  N  P  I  L  P  W  I  Y  F  E  I  S  I  L  S  Y  D  I  Q  L  L  M  I  V  L  K  F  S  R  S  V  V  D  L  D  *  C  F  N  L  N  M  Q  H  R  Y  D  Y  L  R  S  L  S  L  M  L  L  R :   C  S  Q  I  E  V  V  T  Q  *  Y  K  H  R  W  Q  F  L  E  E  S  A  V  N  S  G  I  L  Q  *  D  A  C  Y  F  A  R  *  I  Y  :  R  L  R  D  V  S  M  L  F  R  *  Q  L  I  R  F  S  Q  L  Q  T  K  :  V  *  E  L  K  Q  L  L  E  L  K  L  L  R  L  L  T  F  R  P  V  E  A  P  Y  C  F  A  Q  S  S  S  H  F  E  *  T  A  P  Y  S  I  Q  L  *  E  F  H  Q  D  L  Q  S  K  H  L  Q  C  R  F  R  E  H  L  A  L  A  Q  V  R  Q  A  L  R  Q  W  A  V  V  L  L  A  P  Q  *  *  V  R  S  *  S  I  W  D   </first_frame>
            <second_frame>  K  F  C  *  N  K  Y  I  S  S  V  S  L  L  R  L  Q  T  L  N  S  F  I  I  Q  F  Y  H  G  Y  T  S  K  S  L  Y  *  A  T  I  F  S  F  S  *  L  F  *  S  S  P  G  A  L  L  I  W  I  D  V  S  T  *  I  C  S  I  G  M  T  I  *  D  L  F  H  *  C  F  *   : G  V  V  R  L  K  L  *  H  S  D  I  N  I  D  G  S  F  *  R  N  L  R  S  T  A  G  F  C  S  E  M  H  V  T  L  R  G  E  Y  I :   G  *  E  M  S  P  C  S  S  D  D  S  *  *  G  F  L  S  F  K  Q  R :   C  R  N  *  S  S  C  W  S  *  S  Y  *  G  F  *  H  F  D  L  L  K  L  H  I  V  L  H  K  V  L  H  I  L  S  E  L  R  H  I  Q  F  N  C  R  N  F  I  R  I  F  K  A  N  I  F  N  V  D  F  G  S  I  L  L  W  L  R  *  G  R  L  F  D  N  G  L  W  C  C  W  H  L  N  N  R  C  G  V  D  Q  F  G  M  </second_frame>
            <third_frame>   N  F  V  E  T  N  I  L  A  L  Y  L  F  S  V  S  K  H  *  T  V  S  *  S  N  S  T  M  D  I  L  R  N  L  Y  I  E  L  R  Y  S  A  S  H  D  C  S  E  V  L  Q  E  R  C  *  F  G  L  M  F  Q  L  E  Y  A  A  S  V  *  L  F  E  I  S  F  I  D  A  F  E  :  V  *  S  D  *  S  C  N  T  V  I  *  T  S  M  A  V  S  R  G  I  C  G  Q  Q  R  D  F  A  V  R  C  M  L  L  C  E  V  N  I   : *  V  E  R  C  L  H  A  L  P  M  T  V  N  K  V  F  S  A  S  N  K   : G  V  G  I  E  A  A  A  G  V  K  A  T  K  A  F  D  I  S  T  C  *  S  S  I  L  F  C  T  K  F  F  T  F  *  V  N  C  A  I  F  N  S  I  V  G  I  S  S  G  S  S  K  Q  T  S  S  M  S  I  S  G  A  S  C  S  G  S  G  E  A  G  S  S  T  M  G  C  G  V  A  G  T  S  I  I  G  A  E  L  I  N  L  G  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09SLm0129J22.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="25419" PGL_stop="26217"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="25419" e_stop="25507"/>
            <exon e_start="25593" e_stop="25631"/>
            <exon e_start="25926" e_stop="26217"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.953" e_score="0.966"/>
          <exon-intron don_prob="0.979" acc_prob="0.986" e_score="1.000"/>
          <exon-only e_score="0.969"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.966">
            <gDNA_exon_boundary e_start="25419" e_stop="25507" e_length="89"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.953">
            <gDNA_intron_boundary i_start="25508" i_stop="25592" i_length="85"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="25593" e_stop="25631" e_length="39"/>
          </exon>
          <intron i_serial="2" don_prob="0.979" acc_prob="0.986">
            <gDNA_intron_boundary i_start="25632" i_stop="25925" i_length="294"/>
          </intron>
          <exon e_serial="3" e_score="0.969">
            <gDNA_exon_boundary e_start="25926" e_stop="26217" e_length="292"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25419" stop="25507"/>
              <exon start="25593" stop="25631"/>
              <exon start="25926" stop="26214"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E423086" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25931" stop="26217"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587067" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAGCCAATTGATGTCCCAAGAAATTGGCTATGGAATCTGCCGCGACGAACAGTTTACTTCGGAACCTCTATACCATCAATATTCAAAG : GCCTAACCACAGAAAGTATCCAACATTGCTTTTGGAGAG : GATTTGTTTGTGTGAGGGGTTTTGACAAGAAGTTACGAGCACCACGACCACTCATGGCAAGGTTGCACTTTCCAGCCAGCAAGTTGACTAGGACAAAAGGAAAGCCAGATGAAAACTAGGGTACAGTGTCCAACTGAATCAGCAAGGCAGCCATCCGGGCTGAACAAGCTAACAACATGCAGTACCATGATGTTATAAACCTTAGGAAAGAAAAAAGATAGGCATTCTCTAACATGTAAGTAAGTTGTAGCAAGAGAGTAAATGAGATGATAATCGATTACTTGTAGCTGAT</gDNA_template>
            <first_frame> Q  A  N  *  C  P  K  K  L  A  M  E  S  A  A  T  N  S  L  L  R  N  L  Y  T  I  N  I  Q  R :   P  N  H  R  K  Y  P  T  L  L  L  E  R :   I  C  L  C  E  G  F  *  Q  E  V  T  S  T  T  T  T  H  G  K  V  A  L  S  S  Q  Q  V  D  *  D  K  R  K  A  R  *  K  L  G  Y  S  V  Q  L  N  Q  Q  G  S  H  P  G  *  T  S  *  Q  H  A  V  P  *  C  Y  K  P  *  E  R  K  K  I  G  I  L  *  H  V  S  K  L  *  Q  E  S  K  *  D  D  N  R  L  L  V  A  D </first_frame>
            <second_frame>  K  P  I  D  V  P  R  N  W  L  W  N  L  P  R  R  T  V  Y  F  G  T  S  I  P  S  I  F  K   : G  L  T  T  E  S  I  Q  H  C  F  W  R   : G  F  V  C  V  R  G  F  D  K  K  L  R  A  P  R  P  L  M  A  R  L  H  F  P  A  S  K  L  T  R  T  K  G  K  P  D  E  N  *  G  T  V  S  N  *  I  S  K  A  A  I  R  A  E  Q  A  N  N  M  Q  Y  H  D  V  I  N  L  R  K  E  K  R  *  A  F  S  N  M  *  V  S  C  S  K  R  V  N  E  M  I  I  D  Y  L  *  L   </second_frame>
            <third_frame>   S  Q  L  M  S  Q  E  I  G  Y  G  I  C  R  D  E  Q  F  T  S  E  P  L  Y  H  Q  Y  S  K  :  A  *  P  Q  K  V  S  N  I  A  F  G  E  :  D  L  F  V  *  G  V  L  T  R  S  Y  E  H  H  D  H  S  W  Q  G  C  T  F  Q  P  A  S  *  L  G  Q  K  E  S  Q  M  K  T  R  V  Q  C  P  T  E  S  A  R  Q  P  S  G  L  N  K  L  T  T  C  S  T  M  M  L  *  T  L  G  K  K  K  D  R  H  S  L  T  C  K  *  V  V  A  R  E  *  M  R  *  *  S  I  T  C  S  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09SLm0129J22.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25420" stop="25507"/>
                    <exon start="25593" stop="25631"/>
                    <exon start="25926" stop="26044"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KPIDVPRNWLWNLPRRTVYFGTSIPSIFKGLTTESIQHCFWRGFVCVRGFDKKLRAPRPLMARLHFPASKLTRTKGKPDEN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="34145" PGL_stop="49702"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="34145" e_stop="35285"/>
            <exon e_start="41047" e_stop="41348"/>
            <exon e_start="41436" e_stop="41580"/>
            <exon e_start="41834" e_stop="41937"/>
            <exon e_start="43201" e_stop="43409"/>
            <exon e_start="45415" e_stop="45532"/>
            <exon e_start="45621" e_stop="45826"/>
            <exon e_start="45967" e_stop="46007"/>
            <exon e_start="46303" e_stop="46371"/>
            <exon e_start="46515" e_stop="46615"/>
            <exon e_start="46699" e_stop="46783"/>
            <exon e_start="46858" e_stop="46956"/>
            <exon e_start="47779" e_stop="47847"/>
            <exon e_start="47947" e_stop="48078"/>
            <exon e_start="48849" e_stop="48943"/>
            <exon e_start="49032" e_stop="49234"/>
            <exon e_start="49457" e_stop="49702"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.983" e_score="0.996"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.925" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.939" acc_prob="0.678" e_score="1.000"/>
          <exon-intron don_prob="0.969" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.805" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.956" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.353" acc_prob="0.415" e_score="1.000"/>
          <exon-intron don_prob="0.570" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.710" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.955" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="34145" e_stop="35285" e_length="1141"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.983">
            <gDNA_intron_boundary i_start="35286" i_stop="41046" i_length="5761"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="41047" e_stop="41348" e_length="302"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="41349" i_stop="41435" i_length="87"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="41436" e_stop="41580" e_length="145"/>
          </exon>
          <intron i_serial="3" don_prob="0.925" acc_prob="0.999">
            <gDNA_intron_boundary i_start="41581" i_stop="41833" i_length="253"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="41834" e_stop="41937" e_length="104"/>
          </exon>
          <intron i_serial="4" don_prob="0.939" acc_prob="0.678">
            <gDNA_intron_boundary i_start="41938" i_stop="43200" i_length="1263"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="43201" e_stop="43409" e_length="209"/>
          </exon>
          <intron i_serial="5" don_prob="0.969" acc_prob="0.997">
            <gDNA_intron_boundary i_start="43410" i_stop="45414" i_length="2005"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="45415" e_stop="45532" e_length="118"/>
          </exon>
          <intron i_serial="6" don_prob="0.991" acc_prob="0.805">
            <gDNA_intron_boundary i_start="45533" i_stop="45620" i_length="88"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="45621" e_stop="45826" e_length="206"/>
          </exon>
          <intron i_serial="7" don_prob="0.991" acc_prob="0.956">
            <gDNA_intron_boundary i_start="45827" i_stop="45966" i_length="140"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="45967" e_stop="46007" e_length="41"/>
          </exon>
          <intron i_serial="8" don_prob="0.997" acc_prob="0.992">
            <gDNA_intron_boundary i_start="46008" i_stop="46302" i_length="295"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="46303" e_stop="46371" e_length="69"/>
          </exon>
          <intron i_serial="9" don_prob="0.991" acc_prob="0.989">
            <gDNA_intron_boundary i_start="46372" i_stop="46514" i_length="143"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="46515" e_stop="46615" e_length="101"/>
          </exon>
          <intron i_serial="10" don_prob="0.353" acc_prob="0.415">
            <gDNA_intron_boundary i_start="46616" i_stop="46698" i_length="83"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="46699" e_stop="46783" e_length="85"/>
          </exon>
          <intron i_serial="11" don_prob="0.570" acc_prob="0.989">
            <gDNA_intron_boundary i_start="46784" i_stop="46857" i_length="74"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="46858" e_stop="46956" e_length="99"/>
          </exon>
          <intron i_serial="12" don_prob="0.992" acc_prob="0.000">
            <gDNA_intron_boundary i_start="46957" i_stop="47778" i_length="822"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="47779" e_stop="47847" e_length="69"/>
          </exon>
          <intron i_serial="13" don_prob="0.977" acc_prob="0.999">
            <gDNA_intron_boundary i_start="47848" i_stop="47946" i_length="99"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="47947" e_stop="48078" e_length="132"/>
          </exon>
          <intron i_serial="14" don_prob="0.710" acc_prob="0.999">
            <gDNA_intron_boundary i_start="48079" i_stop="48848" i_length="770"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="48849" e_stop="48943" e_length="95"/>
          </exon>
          <intron i_serial="15" don_prob="0.955" acc_prob="0.999">
            <gDNA_intron_boundary i_start="48944" i_stop="49031" i_length="88"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="49032" e_stop="49234" e_length="203"/>
          </exon>
          <intron i_serial="16" don_prob="0.994" acc_prob="0.999">
            <gDNA_intron_boundary i_start="49235" i_stop="49456" i_length="222"/>
          </intron>
          <exon e_serial="17" e_score="1.000">
            <gDNA_exon_boundary e_start="49457" e_stop="49702" e_length="246"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34145" stop="35285"/>
              <exon start="41047" stop="41348"/>
              <exon start="41436" stop="41580"/>
              <exon start="41834" stop="41937"/>
              <exon start="43201" stop="43409"/>
              <exon start="45415" stop="45532"/>
              <exon start="45621" stop="45826"/>
              <exon start="45967" stop="46007"/>
              <exon start="46303" stop="46371"/>
              <exon start="46515" stop="46615"/>
              <exon start="46699" stop="46783"/>
              <exon start="46858" stop="46956"/>
              <exon start="47779" stop="47847"/>
              <exon start="47947" stop="48078"/>
              <exon start="48849" stop="48943"/>
              <exon start="49032" stop="49234"/>
              <exon start="49457" stop="49696"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E747472" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34515" stop="35285"/>
              <exon start="41047" stop="41348"/>
              <exon start="41436" stop="41580"/>
              <exon start="41834" stop="41937"/>
              <exon start="43201" stop="43409"/>
              <exon start="45415" stop="45532"/>
              <exon start="45621" stop="45826"/>
              <exon start="45967" stop="46007"/>
              <exon start="46303" stop="46371"/>
              <exon start="46515" stop="46615"/>
              <exon start="46699" stop="46783"/>
              <exon start="46858" stop="46956"/>
              <exon start="47779" stop="47847"/>
              <exon start="47947" stop="48078"/>
              <exon start="48849" stop="48943"/>
              <exon start="49032" stop="49234"/>
              <exon start="49457" stop="49691"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745183" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41502" stop="41580"/>
              <exon start="41834" stop="41937"/>
              <exon start="43201" stop="43409"/>
              <exon start="45415" stop="45532"/>
              <exon start="45621" stop="45826"/>
              <exon start="45967" stop="46007"/>
              <exon start="46303" stop="46343"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E708208" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45976" stop="46007"/>
              <exon start="46303" stop="46371"/>
              <exon start="46515" stop="46615"/>
              <exon start="46699" stop="46783"/>
              <exon start="46858" stop="46956"/>
              <exon start="47779" stop="47847"/>
              <exon start="47947" stop="48078"/>
              <exon start="48849" stop="48943"/>
              <exon start="49032" stop="49074"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573098" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46603" stop="46615"/>
              <exon start="46699" stop="46783"/>
              <exon start="46858" stop="46956"/>
              <exon start="47779" stop="47847"/>
              <exon start="47947" stop="48078"/>
              <exon start="48849" stop="48943"/>
              <exon start="49032" stop="49234"/>
              <exon start="49457" stop="49469"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E435537" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46603" stop="46615"/>
              <exon start="46699" stop="46783"/>
              <exon start="46858" stop="46956"/>
              <exon start="47779" stop="47847"/>
              <exon start="47947" stop="48014"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E466446" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48038" stop="48078"/>
              <exon start="48849" stop="48943"/>
              <exon start="49032" stop="49234"/>
              <exon start="49457" stop="49661"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E613191" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48925" stop="48943"/>
              <exon start="49032" stop="49234"/>
              <exon start="49457" stop="49678"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E608355" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49191" stop="49234"/>
              <exon start="49457" stop="49702"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355067" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49191" stop="49234"/>
              <exon start="49457" stop="49702"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356143" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGCTTATAAACGAATCAAATTAATATACACATACTTTTCTGACATATTTATACATTTAATAAAATATCCGATGTGCTTTTAAGTCAAGTGCTTACTGTTCTTATGAACTCAAATCAGTCAAAAGTCATAAGTTTATCATCTCTAAGTCGTAATTTTTCAGCTTATAAGCATTTTTGGATTGATCGGAAACGGAAGAAAGTGAGGCCAAATGGGTTGTAAGAGTAATACTTGAAATTATATAGGGAATCATTTGAAATATGATAAAAGTAGAGGGGAGTTTAATATAATTAAGTTAAACTTATAACTTAAAGTCGAAAATTCCAGGAATATTACGACTAAAACAAGACTTCCCCCATCTTTTTTTTCTCTCACTTCTCATTCGACAAGTACGAAGAAGAAGAAGAAAAGAGAGAAAACTTTTAGTGAGAGAAAGTCTTTGAGAGAGAGAGGGAGTTGAAGCTATAGTGTAATGAACAATTTCTAGCTAGGGTTTTGTTGAATTGATAAATTATTGAGATGGAAATGTCTACTAGACGATCGAATTATACTTTGTTGAGTCAAGTTGCAGATGACAATTACCTTCCTCCGCCACCGAAGTACTCCGTCACTGGCGGTGGCGGTGGAGGTGGAGGAGTAGCACCGTATTATGAGTCTCATTCTGGTGAAAAGGGTAAAGGCAAAACAGGTGATAATAGAGGATTTGATTGGGATTTGAGTGATCACCGTAGTAATATGATGCAAGCGTCGAATCGGATCGGTGCGGCGGCATTTCCAGGTTCGATTGGCTTGCAGAGGCAATCAAGTGGGAGCAGCTTTGGTGAAAGTTCGATCTCCGGGGAGTATTACATGCCGTCGTTGTCTAATGCGGAGGCGTCATTTGGATATCTCAATGATGGCGGTGGCGGTGCTGAAGTGAGGATGAAGCCGTTGGAAGCTAATTTGTTCGGTGGCTCGTCTTCTAAGAGCTGGGCGCAGCAGACTGAGGAGAGTTATCAGCTGCAGTTAGCTTTGGCTTTACGGCTTTCTTCCGAAGCTACCTGTGCTGATGATCCAAATTTTTTGGATCATGTGCCTGATGAATCCGCATCCCGTGCTTCAGCTTCAGCTGCTTCGGCGGAGACCCTTTCCCATCGATTCTGG : GTAAATGGATGCTTGTCGTACTTTGACAAAGTGCCTGATGGATTTTACTTGATCCATGGGATGGATCCATATGTCTGGATTGTCTGCTCAGATCTACAAGAAAATGCCCGGGTTCCATCTATTGAATCAATGAGAGCTGTTGATCCCTCTGTAGTACCATCAGTTGAAGTGATTTTGATTGATCGGCGTACGGATCCAAGCTTGAAAGAACTGCAGAATCGGATCCATAGTCTCTCTCCTACTTGTGGCACAACAAAAGAAGTTGTTGATCAGCTTGCTCAGCTGGTCTGCAGTCATATGGG : GGGCGCAACTTCTGCCGGAGAAGATGAGTTGGTTCCTTTGTGGAAGGAGTGTAGTTATGAGCTGAAGGATTGTCTAGGATCCACTGTGCTTCCCATTGGTAGCCTGTCTGTTGGCCTTTGCAGGCATCGAGCTTTGCTATTTAAA : GTTCTAGCTGACGCCATTGGTTTACCATGTCGAATTGCCAAAGGATGTAAATATTGTAACAGAGCTGATGCTTCCTCATGTTTAGTTCGTTTTGGACCTGACAG : GGAGTACCTGGTTGATTTGATTGGGAGCCCTGGATGCTTATGCGAACCAGATTCCTCGCTCAACGGCCCATCTTCTATCTCAATCTCTTCACCATTGCGATTTCCGAGATTCAGAGAAGTTGAACCGACAACTGATTTCAGGTCACTTGCCAAACAGTATTTCTCGGATTGTCAATCGCTTAATCTTGTGTTTGAGGAATCTTCAGCAG : GAGCTGCTGTTGATGGAGACGCAGGACAAACTGACCGAAATAACATTGAGAGAAACAGTGCTGTCACTGGTCCAAGTAACCGTGATGAAGTTTCTCGGTTACCTGTGCCTGCAATTAG : GGACATGGCTCCTGTGAAGTATGTCCGTCCAGTTTTGCATGGAGATACACAATTATCAGACCCAAGAGATATAGGGAATGATATGCGATTTCTTGAGAGAGGAAGTCAACTTGTTCCCTCTAAAATAAGTAGAGACATTGCCCTTGAAATAGAAGATTTTGATATACCCTGGGAAGATCTTGTTCTGAAGGAGAGGATTGGGGCAG : GGTCTTTTGGTACTGTTCACCGTGCTGATTGGAATGGTTCT : GATGTTGCTGTGAAGATACTCATGGAACAAGATTTTCATGCAGAGCGATTCAAGGAATTTTTGCGGGAG : GTTGCAATTATGAAGCGGTTGCGACACCCAAATATTGTGCTTTTTATGGGTGCAGTTACTCAGCGACCAAACTTGTCCATAGTTACAGAATATTTATCAAG : AGGTAGCTTATATAGACTTCTTCATAAACCTGGTGCTAGGGAGGTTTTGGATGAAAGGTGTCGGTTGTCTATGGCATATGATGTG : GCAAAGGGGATGAATTATCTACATAAACGCAATCCTCCCATCGTTCATAGAGATTTGAAATCTCCAAATCTTTTAGTGGACAAAAAATACACAGTGAAG : GTCTGTGATTTTGGCCTTTCTCGTTTAAAAGCGAACACATTTCTCTCGTCAAAGTCTGCTGCTGGGACT : CCGGAATGGATGGCACCTGAAGTTCTTCGTGATGAACCATCAAATGAGAAATCTGATGTATACAGCTTTGGTGTTATTTTGTGGGAGCTGGCAACGTTGCAACAGCCTTGGAGTAATTTGAACCCAGCACAG : GTTGTAGCAGCTGTGAGCTTTAAGGGGAAAAGACTCGACATTCCACGTGACTTGACTCCTCAAGTGGCAAGCATTATAGAGGCTTGCTGGGCCAA : AGAACCATGGAAACGTCCCTCCTTTGCTGCAATCATGGATATGCTGAGACCACTAATTAAACCTCCTGTAACACCTCCTCAACCAGGCCGTACAGACACGCAGTTGATTGCGTGAATGCGTGTAATAGATGTATGATTTCTGCACATATTTGGCATTCTTTGTTAATCATCTTCTGGGAGGAACAAATCTTTGTTTACTTCAG : GCTTTTGTTCCGTACATATTAGTTCAGAATGCCCGTCTAGAGCCATTTTTTTTCTTCACAAATTCAAGCAGCCATTTCTCCCAGAAGAGCATTTGCAATTGACTTGTACGTTTCCTCGTGGAAATAATGTCTAGCCATATGATTTTGTTAATGTAAGCAAATAACAGTTCTTCTATTTTCTATCAAGAAATGATTTTGTACGTACAAGAATTTATAATGGGAATGCACAGTTCGTATCACGTCTTT</gDNA_template>
            <first_frame> K  L  I  N  E  S  N  *  Y  T  H  T  F  L  T  Y  L  Y  I  *  *  N  I  R  C  A  F  K  S  S  A  Y  C  S  Y  E  L  K  S  V  K  S  H  K  F  I  I  S  K  S  *  F  F  S  L  *  A  F  L  D  *  S  E  T  E  E  S  E  A  K  W  V  V  R  V  I  L  E  I  I  *  G  I  I  *  N  M  I  K  V  E  G  S  L  I  *  L  S  *  T  Y  N  L  K  S  K  I  P  G  I  L  R  L  K  Q  D  F  P  H  L  F  F  L  S  L  L  I  R  Q  V  R  R  R  R  R  K  E  R  K  L  L  V  R  E  S  L  *  E  R  E  G  V  E  A  I  V  *  *  T  I  S  S  *  G  F  V  E  L  I  N  Y  *  D  G  N  V  Y  *  T  I  E  L  Y  F  V  E  S  S  C  R  *  Q  L  P  S  S  A  T  E  V  L  R  H  W  R  W  R  W  R  W  R  S  S  T  V  L  *  V  S  F  W  *  K  G  *  R  Q  N  R  *  *  *  R  I  *  L  G  F  E  *  S  P  *  *  Y  D  A  S  V  E  S  D  R  C  G  G  I  S  R  F  D  W  L  A  E  A  I  K  W  E  Q  L  W  *  K  F  D  L  R  G  V  L  H  A  V  V  V  *  C  G  G  V  I  W  I  S  Q  *  W  R  W  R  C  *  S  E  D  E  A  V  G  S  *  F  V  R  W  L  V  F  *  E  L  G  A  A  D  *  G  E  L  S  A  A  V  S  F  G  F  T  A  F  F  R  S  Y  L  C  *  *  S  K  F  F  G  S  C  A  *  *  I  R  I  P  C  F  S  F  S  C  F  G  G  D  P  F  P  S  I  L   : G  K  W  M  L  V  V  L  *  Q  S  A  *  W  I  L  L  D  P  W  D  G  S  I  C  L  D  C  L  L  R  S  T  R  K  C  P  G  S  I  Y  *  I  N  E  S  C  *  S  L  C  S  T  I  S  *  S  D  F  D  *  S  A  Y  G  S  K  L  E  R  T  A  E  S  D  P  *  S  L  S  Y  L  W  H  N  K  R  S  C  *  S  A  C  S  A  G  L  Q  S  Y  G  :  G  R  N  F  C  R  R  R  *  V  G  S  F  V  E  G  V  *  L  *  A  E  G  L  S  R  I  H  C  A  S  H  W  *  P  V  C  W  P  L  Q  A  S  S  F  A  I  *   : S  S  S  *  R  H  W  F  T  M  S  N  C  Q  R  M  *  I  L  *  Q  S  *  C  F  L  M  F  S  S  F  W  T  *  Q  :  G  V  P  G  *  F  D  W  E  P  W  M  L  M  R  T  R  F  L  A  Q  R  P  I  F  Y  L  N  L  F  T  I  A  I  S  E  I  Q  R  S  *  T  D  N  *  F  Q  V  T  C  Q  T  V  F  L  G  L  S  I  A  *  S  C  V  *  G  I  F  S  R :   S  C  C  *  W  R  R  R  T  N  *  P  K  *  H  *  E  K  Q  C  C  H  W  S  K  *  P  *  *  S  F  S  V  T  C  A  C  N  *  :  G  H  G  S  C  E  V  C  P  S  S  F  A  W  R  Y  T  I  I  R  P  K  R  Y  R  E  *  Y  A  I  S  *  E  R  K  S  T  C  S  L  *  N  K  *  R  H  C  P  *  N  R  R  F  *  Y  T  L  G  R  S  C  S  E  G  E  D  W  G  R :   V  F  W  Y  C  S  P  C  *  L  E  W  F   : *  C  C  C  E  D  T  H  G  T  R  F  S  C  R  A  I  Q  G  I  F  A  G   : G  C  N  Y  E  A  V  A  T  P  K  Y  C  A  F  Y  G  C  S  Y  S  A  T  K  L  V  H  S  Y  R  I  F  I  K  :  R  *  L  I  *  T  S  S  *  T  W  C  *  G  G  F  G  *  K  V  S  V  V  Y  G  I  *  C   : G  K  G  D  E  L  S  T  *  T  Q  S  S  H  R  S  *  R  F  E  I  S  K  S  F  S  G  Q  K  I  H  S  E   : G  L  *  F  W  P  F  S  F  K  S  E  H  I  S  L  V  K  V  C  C  W  D   : S  G  M  D  G  T  *  S  S  S  *  *  T  I  K  *  E  I  *  C  I  Q  L  W  C  Y  F  V  G  A  G  N  V  A  T  A  L  E  *  F  E  P  S  T   : G  C  S  S  C  E  L  *  G  E  K  T  R  H  S  T  *  L  D  S  S  S  G  K  H  Y  R  G  L  L  G  Q  :  R  T  M  E  T  S  L  L  C  C  N  H  G  Y  A  E  T  T  N  *  T  S  C  N  T  S  S  T  R  P  Y  R  H  A  V  D  C  V  N  A  C  N  R  C  M  I  S  A  H  I  W  H  S  L  L  I  I  F  W  E  E  Q  I  F  V  Y  F  R :   L  L  F  R  T  Y  *  F  R  M  P  V  *  S  H  F  F  S  S  Q  I  Q  A  A  I  S  P  R  R  A  F  A  I  D  L  Y  V  S  S  W  K  *  C  L  A  I  *  F  C  *  C  K  Q  I  T  V  L  L  F  S  I  K  K  *  F  C  T  Y  K  N  L  *  W  E  C  T  V  R  I  T  S   </first_frame>
            <second_frame>  S  L  *  T  N  Q  I  N  I  H  I  L  F  *  H  I  Y  T  F  N  K  I  S  D  V  L  L  S  Q  V  L  T  V  L  M  N  S  N  Q  S  K  V  I  S  L  S  S  L  S  R  N  F  S  A  Y  K  H  F  W  I  D  R  K  R  K  K  V  R  P  N  G  L  *  E  *  Y  L  K  L  Y  R  E  S  F  E  I  *  *  K  *  R  G  V  *  Y  N  *  V  K  L  I  T  *  S  R  K  F  Q  E  Y  Y  D  *  N  K  T  S  P  I  F  F  F  S  H  F  S  F  D  K  Y  E  E  E  E  E  K  R  E  N  F  *  *  E  K  V  F  E  R  E  R  E  L  K  L  *  C  N  E  Q  F  L  A  R  V  L  L  N  *  *  I  I  E  M  E  M  S  T  R  R  S  N  Y  T  L  L  S  Q  V  A  D  D  N  Y  L  P  P  P  P  K  Y  S  V  T  G  G  G  G  G  G  G  G  V  A  P  Y  Y  E  S  H  S  G  E  K  G  K  G  K  T  G  D  N  R  G  F  D  W  D  L  S  D  H  R  S  N  M  M  Q  A  S  N  R  I  G  A  A  A  F  P  G  S  I  G  L  Q  R  Q  S  S  G  S  S  F  G  E  S  S  I  S  G  E  Y  Y  M  P  S  L  S  N  A  E  A  S  F  G  Y  L  N  D  G  G  G  G  A  E  V  R  M  K  P  L  E  A  N  L  F  G  G  S  S  S  K  S  W  A  Q  Q  T  E  E  S  Y  Q  L  Q  L  A  L  A  L  R  L  S  S  E  A  T  C  A  D  D  P  N  F  L  D  H  V  P  D  E  S  A  S  R  A  S  A  S  A  A  S  A  E  T  L  S  H  R  F  W  :  V  N  G  C  L  S  Y  F  D  K  V  P  D  G  F  Y  L  I  H  G  M  D  P  Y  V  W  I  V  C  S  D  L  Q  E  N  A  R  V  P  S  I  E  S  M  R  A  V  D  P  S  V  V  P  S  V  E  V  I  L  I  D  R  R  T  D  P  S  L  K  E  L  Q  N  R  I  H  S  L  S  P  T  C  G  T  T  K  E  V  V  D  Q  L  A  Q  L  V  C  S  H  M  G :   G  A  T  S  A  G  E  D  E  L  V  P  L  W  K  E  C  S  Y  E  L  K  D  C  L  G  S  T  V  L  P  I  G  S  L  S  V  G  L  C  R  H  R  A  L  L  F  K  :  V  L  A  D  A  I  G  L  P  C  R  I  A  K  G  C  K  Y  C  N  R  A  D  A  S  S  C  L  V  R  F  G  P  D  R :   E  Y  L  V  D  L  I  G  S  P  G  C  L  C  E  P  D  S  S  L  N  G  P  S  S  I  S  I  S  S  P  L  R  F  P  R  F  R  E  V  E  P  T  T  D  F  R  S  L  A  K  Q  Y  F  S  D  C  Q  S  L  N  L  V  F  E  E  S  S  A   : G  A  A  V  D  G  D  A  G  Q  T  D  R  N  N  I  E  R  N  S  A  V  T  G  P  S  N  R  D  E  V  S  R  L  P  V  P  A  I  R :   D  M  A  P  V  K  Y  V  R  P  V  L  H  G  D  T  Q  L  S  D  P  R  D  I  G  N  D  M  R  F  L  E  R  G  S  Q  L  V  P  S  K  I  S  R  D  I  A  L  E  I  E  D  F  D  I  P  W  E  D  L  V  L  K  E  R  I  G  A   : G  S  F  G  T  V  H  R  A  D  W  N  G  S  :  D  V  A  V  K  I  L  M  E  Q  D  F  H  A  E  R  F  K  E  F  L  R  E  :  V  A  I  M  K  R  L  R  H  P  N  I  V  L  F  M  G  A  V  T  Q  R  P  N  L  S  I  V  T  E  Y  L  S  R :   G  S  L  Y  R  L  L  H  K  P  G  A  R  E  V  L  D  E  R  C  R  L  S  M  A  Y  D  V  :  A  K  G  M  N  Y  L  H  K  R  N  P  P  I  V  H  R  D  L  K  S  P  N  L  L  V  D  K  K  Y  T  V  K  :  V  C  D  F  G  L  S  R  L  K  A  N  T  F  L  S  S  K  S  A  A  G  T  :  P  E  W  M  A  P  E  V  L  R  D  E  P  S  N  E  K  S  D  V  Y  S  F  G  V  I  L  W  E  L  A  T  L  Q  Q  P  W  S  N  L  N  P  A  Q  :  V  V  A  A  V  S  F  K  G  K  R  L  D  I  P  R  D  L  T  P  Q  V  A  S  I  I  E  A  C  W  A  K :   E  P  W  K  R  P  S  F  A  A  I  M  D  M  L  R  P  L  I  K  P  P  V  T  P  P  Q  P  G  R  T  D  T  Q  L  I  A  *  M  R  V  I  D  V  *  F  L  H  I  F  G  I  L  C  *  S  S  S  G  R  N  K  S  L  F  T  S   : G  F  C  S  V  H  I  S  S  E  C  P  S  R  A  I  F  F  L  H  K  F  K  Q  P  F  L  P  E  E  H  L  Q  L  T  C  T  F  P  R  G  N  N  V  *  P  Y  D  F  V  N  V  S  K  *  Q  F  F  Y  F  L  S  R  N  D  F  V  R  T  R  I  Y  N  G  N  A  Q  F  V  S  R  L  </second_frame>
            <third_frame>   A  Y  K  R  I  K  L  I  Y  T  Y  F  S  D  I  F  I  H  L  I  K  Y  P  M  C  F  *  V  K  C  L  L  F  L  *  T  Q  I  S  Q  K  S  *  V  Y  H  L  *  V  V  I  F  Q  L  I  S  I  F  G  L  I  G  N  G  R  K  *  G  Q  M  G  C  K  S  N  T  *  N  Y  I  G  N  H  L  K  Y  D  K  S  R  G  E  F  N  I  I  K  L  N  L  *  L  K  V  E  N  S  R  N  I  T  T  K  T  R  L  P  P  S  F  F  S  L  T  S  H  S  T  S  T  K  K  K  K  K  R  E  K  T  F  S  E  R  K  S  L  R  E  R  G  S  *  S  Y  S  V  M  N  N  F  *  L  G  F  C  *  I  D  K  L  L  R  W  K  C  L  L  D  D  R  I  I  L  C  *  V  K  L  Q  M  T  I  T  F  L  R  H  R  S  T  P  S  L  A  V  A  V  E  V  E  E  *  H  R  I  M  S  L  I  L  V  K  R  V  K  A  K  Q  V  I  I  E  D  L  I  G  I  *  V  I  T  V  V  I  *  C  K  R  R  I  G  S  V  R  R  H  F  Q  V  R  L  A  C  R  G  N  Q  V  G  A  A  L  V  K  V  R  S  P  G  S  I  T  C  R  R  C  L  M  R  R  R  H  L  D  I  S  M  M  A  V  A  V  L  K  *  G  *  S  R  W  K  L  I  C  S  V  A  R  L  L  R  A  G  R  S  R  L  R  R  V  I  S  C  S  *  L  W  L  Y  G  F  L  P  K  L  P  V  L  M  I  Q  I  F  W  I  M  C  L  M  N  P  H  P  V  L  Q  L  Q  L  L  R  R  R  P  F  P  I  D  S  G :   *  M  D  A  C  R  T  L  T  K  C  L  M  D  F  T  *  S  M  G  W  I  H  M  S  G  L  S  A  Q  I  Y  K  K  M  P  G  F  H  L  L  N  Q  *  E  L  L  I  P  L  *  Y  H  Q  L  K  *  F  *  L  I  G  V  R  I  Q  A  *  K  N  C  R  I  G  S  I  V  S  L  L  L  V  A  Q  Q  K  K  L  L  I  S  L  L  S  W  S  A  V  I  W   : G  A  Q  L  L  P  E  K  M  S  W  F  L  C  G  R  S  V  V  M  S  *  R  I  V  *  D  P  L  C  F  P  L  V  A  C  L  L  A  F  A  G  I  E  L  C  Y  L  K :   F  *  L  T  P  L  V  Y  H  V  E  L  P  K  D  V  N  I  V  T  E  L  M  L  P  H  V  *  F  V  L  D  L  T   : G  S  T  W  L  I  *  L  G  A  L  D  A  Y  A  N  Q  I  P  R  S  T  A  H  L  L  S  Q  S  L  H  H  C  D  F  R  D  S  E  K  L  N  R  Q  L  I  S  G  H  L  P  N  S  I  S  R  I  V  N  R  L  I  L  C  L  R  N  L  Q  Q  :  E  L  L  L  M  E  T  Q  D  K  L  T  E  I  T  L  R  E  T  V  L  S  L  V  Q  V  T  V  M  K  F  L  G  Y  L  C  L  Q  L   : G  T  W  L  L  *  S  M  S  V  Q  F  C  M  E  I  H  N  Y  Q  T  Q  E  I  *  G  M  I  C  D  F  L  R  E  E  V  N  L  F  P  L  K  *  V  E  T  L  P  L  K  *  K  I  L  I  Y  P  G  K  I  L  F  *  R  R  G  L  G  Q  :  G  L  L  V  L  F  T  V  L  I  G  M  V  L :   M  L  L  *  R  Y  S  W  N  K  I  F  M  Q  S  D  S  R  N  F  C  G  R :   L  Q  L  *  S  G  C  D  T  Q  I  L  C  F  L  W  V  Q  L  L  S  D  Q  T  C  P  *  L  Q  N  I  Y  Q   : E  V  A  Y  I  D  F  F  I  N  L  V  L  G  R  F  W  M  K  G  V  G  C  L  W  H  M  M  W :   Q  R  G  *  I  I  Y  I  N  A  I  L  P  S  F  I  E  I  *  N  L  Q  I  F  *  W  T  K  N  T  Q  *  R :   S  V  I  L  A  F  L  V  *  K  R  T  H  F  S  R  Q  S  L  L  L  G  L :   R  N  G  W  H  L  K  F  F  V  M  N  H  Q  M  R  N  L  M  Y  T  A  L  V  L  F  C  G  S  W  Q  R  C  N  S  L  G  V  I  *  T  Q  H  R :   L  *  Q  L  *  A  L  R  G  K  D  S  T  F  H  V  T  *  L  L  K  W  Q  A  L  *  R  L  A  G  P   : K  N  H  G  N  V  P  P  L  L  Q  S  W  I  C  *  D  H  *  L  N  L  L  *  H  L  L  N  Q  A  V  Q  T  R  S  *  L  R  E  C  V  *  *  M  Y  D  F  C  T  Y  L  A  F  F  V  N  H  L  L  G  G  T  N  L  C  L  L  Q  :  A  F  V  P  Y  I  L  V  Q  N  A  R  L  E  P  F  F  F  F  T  N  S  S  S  H  F  S  Q  K  S  I  C  N  *  L  V  R  F  L  V  E  I  M  S  S  H  M  I  L  L  M  *  A  N  N  S  S  S  I  F  Y  Q  E  M  I  L  Y  V  Q  E  F  I  M  G  M  H  S  S  Y  H  V  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09SLm0129J22.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34653" stop="35285"/>
                    <exon start="41047" stop="41348"/>
                    <exon start="41436" stop="41580"/>
                    <exon start="41834" stop="41937"/>
                    <exon start="43201" stop="43409"/>
                    <exon start="45415" stop="45532"/>
                    <exon start="45621" stop="45826"/>
                    <exon start="45967" stop="46007"/>
                    <exon start="46303" stop="46371"/>
                    <exon start="46515" stop="46615"/>
                    <exon start="46699" stop="46783"/>
                    <exon start="46858" stop="46956"/>
                    <exon start="47779" stop="47847"/>
                    <exon start="47947" stop="48078"/>
                    <exon start="48849" stop="48943"/>
                    <exon start="49032" stop="49146"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>2520</number_coding_nucleotides>
                  <number_encoded_amino_acids>840</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IIEMEMSTRRSNYTLLSQVADDNYLPPPPKYSVTGGGGGGGGVAPYYESHSGEKGKGKTGDNRGFDWDLSDHRSNMMQASNRIGAAAFPGSIGLQRQSSGSSFGESSISGEYYMPSLSNAEASFGYLNDGGGGAEVRMKPLEANLFGGSSSKSWAQQTEESYQLQLALALRLSSEATCADDPNFLDHVPDESASRASASAASAETLSHRFWVNGCLSYFDKVPDGFYLIHGMDPYVWIVCSDLQENARVPSIESMRAVDPSVVPSVEVILIDRRTDPSLKELQNRIHSLSPTCGTTKEVVDQLAQLVCSHMGGATSAGEDELVPLWKECSYELKDCLGSTVLPIGSLSVGLCRHRALLFKVLADAIGLPCRIAKGCKYCNRADASSCLVRFGPDREYLVDLIGSPGCLCEPDSSLNGPSSISISSPLRFPRFREVEPTTDFRSLAKQYFSDCQSLNLVFEESSAGAAVDGDAGQTDRNNIERNSAVTGPSNRDEVSRLPVPAIRDMAPVKYVRPVLHGDTQLSDPRDIGNDMRFLERGSQLVPSKISRDIALEIEDFDIPWEDLVLKERIGAGSFGTVHRADWNGSDVAVKILMEQDFHAERFKEFLREVAIMKRLRHPNIVLFMGAVTQRPNLSIVTEYLSRGSLYRLLHKPGAREVLDERCRLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWSNLNPAQVVAAVSFKGKRLDIPRDLTPQVASIIEACWAKEPWKRPSFAAIMDMLRPLIKPPVTPPQPGRTDTQLIA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="55249" PGL_stop="50248"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="55249" e_stop="54505"/>
            <exon e_start="53778" e_stop="52380"/>
            <exon e_start="50839" e_stop="50248"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.998" e_score="0.958"/>
          <exon-intron don_prob="0.999" acc_prob="0.956" e_score="0.979"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.958">
            <gDNA_exon_boundary e_start="55249" e_stop="54505" e_length="745"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="54504" i_stop="53779" i_length="726"/>
          </intron>
          <exon e_serial="2" e_score="0.979">
            <gDNA_exon_boundary e_start="53778" e_stop="52380" e_length="1399"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.956">
            <gDNA_intron_boundary i_start="52379" i_stop="50840" i_length="1540"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="50839" e_stop="50248" e_length="592"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55249" stop="54690"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476857" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55219" stop="54527"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E618700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55211" stop="54505"/>
              <exon start="53778" stop="52601"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E741094" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55210" stop="54849"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E358676" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55200" stop="54819"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472153" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55191" stop="54595"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412321" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55191" stop="54804"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E470396" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55184" stop="54646"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729398" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55145" stop="54572"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207379" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55145" stop="54589"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212690" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55145" stop="54691"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55133" stop="54856"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472157" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53630" stop="52794"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726359" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53604" stop="52988"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367152" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53156" stop="52517"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53156" stop="52642"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202156" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53156" stop="52645"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207709" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53156" stop="52746"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202010" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53156" stop="52864"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204650" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52517" stop="52380"/>
              <exon start="50839" stop="50248"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577615" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52490" stop="52380"/>
              <exon start="50839" stop="50256"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375909" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52421" stop="52380"/>
              <exon start="50839" stop="50256"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249319" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTTCCTCATAAATCCTTTTCATTTTCCAGAAACCATACAAGAATCCAAAAAAAAAATAAAAAATTAAAATGGAGCTTCAGGAGAAAAACTCCACCGACTTTACAGAGTTGTTTACAGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTCAACCCCTTTTACCGACTTTTTATCTATCACCCTTATCGAAATTTTGAATCTTTTGATCACAAAAACTATTAAAGTTTCAATCTTTGATCCATAAAAACCACAAATCTCTTTGTATGATATGAACCCATTTGATAAAAAACAAGAATCTGATACTGATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACATCCAGTTGGAGAAGGGGAAGGAGAAGGAGAAGGGGGAGAAATTGAACAGCCAGCTGAGGGAGGATTGGGTGTGCCGCAGCCTATGGAGTGTTTACATGGGATACAAATTCCGCCATTTTTGTCAAAGACTTTTGATTTGGTTGAGGACCCTTTATTGGATACGATTATTTCTTGGGGTAGAAATGGAGAAAGCTTTGTAGTTTGGGATCCAGTGGAGTTTTCAAGATTGGTTCTTCCTAGGAATTTCAAGCACAGTAATTTCTCCAGCTTTGTTCGACAGCTTAATACATAT : GGATTTCGCAAAATCGATGCTGACAGGTGGGAGTTTGCGAATGAAGGGTTCTCGAGAGGGAAGAGGCATTTGTTGAAGAACATACAGAGGCGAAGGTCACATCAGGGTGGGAGTTCTTCTGGATCATCTGCTGAAGCAGGGAAAGGTACTATGGATGAGATAGAGAAACTCAGGAATGAGAAGAGTTTGATGATGCAGGAAGTTGTTGAGTTGCAGCAGCAGCAGCGTGGAACAGTTCAACAAATGGAATCCGTTAATGAAAAGCTTCAGGCTGCAGAACAAAGACAGAAGCAGATGGTTTCATTCTTGGCCAAGGTGCTTCAAAATCCCACATTCTTGGCTCGTGTTCGGCAGATGAAGGAGCAAGGAGAAATTACTAGTCCAAGAACAATGAGGAAATTTGTTAAACATCAGTCACATGGTCCGGATGGAGTGGGGTCGTCTTCAATGGAAGGGCAGATAGTCAAGTTCAGGTCTGACTTTCAAGACCTTGCAGGATGCTTTGACAGCCCAGATTTCAATACAGTTGTGGATCAACAACTCCCAGAAATTGGTTTAGGAGCGGAAGCCATGCCTTTTGAAGGTGTTCCTGTTGCTGATGAACTGACAGTGGCACATGAACTTCTTAATTGTTCAGATCGGGAAATACGAGGAGCTTCATTCTTTAACTCCGAAGGCTCTCAATTCAAAGGGAAGAATGTAGCTAGTCCTCAAATAGAAGTTATGCCCGAGTACTTTGCCTCTTTTCCAGAGGAGATGGGGAAGGAGAAGAACGTTTCAGGATTTTCCACACCAGCTATTGGAAGTATGGTGAAAGATGAGGAACTTTGGGGTATGGGTTTTGAAGCCAGTGCTGGCATGCCAAGCACTGGTGCCGAGTTATGGGATAGTCGTAGCAGCTATGTTCCAGACTTTGGTGTTAGCTCTGGTTTGTCAGATTTATGGGATATAGATCCCTTGCAGGTAGCTGGAAGTTCTGGGGTCGATAAGTGGCCAGCTGATGGGTCTCCTTTTGGTCAGTCTGGAAGTCATGCAAACCAGCCCAAGAATGATAGTTTCTAGGAAAGAGTACCCTTGGGCCTTCAGTGTGCCATTGGGATACTGCCATCATTTAGTTGATGGGACATAATATTGAATGAGTGATTATAAATATTTTAGTTGATAATTACTTTTGACTGGTTCTTTTCTTCTATTCCCTCTCCTTGGTCTGCTATTTCTCCGCTAATTGTGCTGGACTGTGAATATTTGATGGCATAAATTGTAGATATTTCCTGCTAACATATACTCTTTTAAGTTGTGAAATACGCAGGTTTGCAGCACTGAAGGCGAGTATGGGACTTCTTTAGAGAATTTCGGACTTGAATGAGTGAATGACATTGCTCGCTCAAGCTTTTTCCAG : TCGATTCTTCTGTAATTGCTTGCTTGGATCTTGTACCCTCGCCTAGGCAAAGCAATGATGTACATCAGAAACAGCTGGCGAAGTCCTTCTCAGGGCTTAGCTCAGGTGGCAAAGGTCGAGGGAAGTTCAAGCCTTGCATCATGCGAACTAAGCCTGATATTTAAGTGGACATTGTGTTTGGTTCCAAGGGTTGGGCCAGACTGATTTCTTGGTTATCAAGAAAAAGATCCTGCTCAGCTATTCGGTTCCCCTTAGCTTATTTGTATATATCTAAATGTGTAGGATGTTCATCAGGGGCAATCTGATTATTGTTGTGTCAATGTAATAATTGATAGGTTATCCTGGCAAACCATTTGAGAAGTATCTGTACTGTGATATTGATAGGGGGAAGAAATGGTCATCAGAAAGGTGATTAGACATGACAAACTTATAGCTTACCATGGATATGATTCCTAAATAAGAGGATATTGGGGTTGATCATTAGGGTAGAACATTAGTAAGTAGTCCAACATTGTTTAGTTTCCTTATTATTGTTCTCCTAGTTTCGTATTCTGCAATTTTAGTATTATCTGTTGTTCCTTTTTATTTTTGT</gDNA_template>
            <first_frame> V  S  S  *  I  L  F  I  F  Q  K  P  Y  K  N  P  K  K  K  *  K  I  K  M  E  L  Q  E  K  N  S  T  D  F  T  E  L  F  T  G  D  I  S  W  F  V  C  R  R  Y  L  Y  K  P  P  F  N  P  F  Y  R  L  F  I  Y  H  P  Y  R  N  F  E  S  F  D  H  K  N  Y  *  S  F  N  L  *  S  I  K  T  T  N  L  F  V  *  Y  E  P  I  *  *  K  T  R  I  *  Y  *  Y  K  N  P  I  F  D  *  N  G  L  *  I  C  C  V  F  T  N  F  T  P  F  C  *  P  I  F  S  F  Y  Q  F  W  I  F  C  H  S  F  E  P  T  S  S  W  R  R  G  R  R  R  R  R  G  R  N  *  T  A  S  *  G  R  I  G  C  A  A  A  Y  G  V  F  T  W  D  T  N  S  A  I  F  V  K  D  F  *  F  G  *  G  P  F  I  G  Y  D  Y  F  L  G  *  K  W  R  K  L  C  S  L  G  S  S  G  V  F  K  I  G  S  S  *  E  F  Q  A  Q  *  F  L  Q  L  C  S  T  A  *  Y  I   : W  I  S  Q  N  R  C  *  Q  V  G  V  C  E  *  R  V  L  E  R  E  E  A  F  V  E  E  H  T  E  A  K  V  T  S  G  W  E  F  F  W  I  I  C  *  S  R  E  R  Y  Y  G  *  D  R  E  T  Q  E  *  E  E  F  D  D  A  G  S  C  *  V  A  A  A  A  A  W  N  S  S  T  N  G  I  R  *  *  K  A  S  G  C  R  T  K  T  E  A  D  G  F  I  L  G  Q  G  A  S  K  S  H  I  L  G  S  C  S  A  D  E  G  A  R  R  N  Y  *  S  K  N  N  E  E  I  C  *  T  S  V  T  W  S  G  W  S  G  V  V  F  N  G  R  A  D  S  Q  V  Q  V  *  L  S  R  P  C  R  M  L  *  Q  P  R  F  Q  Y  S  C  G  S  T  T  P  R  N  W  F  R  S  G  S  H  A  F  *  R  C  S  C  C  *  *  T  D  S  G  T  *  T  S  *  L  F  R  S  G  N  T  R  S  F  I  L  *  L  R  R  L  S  I  Q  R  E  E  C  S  *  S  S  N  R  S  Y  A  R  V  L  C  L  F  S  R  G  D  G  E  G  E  E  R  F  R  I  F  H  T  S  Y  W  K  Y  G  E  R  *  G  T  L  G  Y  G  F  *  S  Q  C  W  H  A  K  H  W  C  R  V  M  G  *  S  *  Q  L  C  S  R  L  W  C  *  L  W  F  V  R  F  M  G  Y  R  S  L  A  G  S  W  K  F  W  G  R  *  V  A  S  *  W  V  S  F  W  S  V  W  K  S  C  K  P  A  Q  E  *  *  F  L  G  K  S  T  L  G  P  S  V  C  H  W  D  T  A  I  I  *  L  M  G  H  N  I  E  *  V  I  I  N  I  L  V  D  N  Y  F  *  L  V  L  F  F  Y  S  L  S  L  V  C  Y  F  S  A  N  C  A  G  L  *  I  F  D  G  I  N  C  R  Y  F  L  L  T  Y  T  L  L  S  C  E  I  R  R  F  A  A  L  K  A  S  M  G  L  L  *  R  I  S  D  L  N  E  *  M  T  L  L  A  Q  A  F  S  S :   R  F  F  C  N  C  L  L  G  S  C  T  L  A  *  A  K  Q  *  C  T  S  E  T  A  G  E  V  L  L  R  A  *  L  R  W  Q  R  S  R  E  V  Q  A  L  H  H  A  N  *  A  *  Y  L  S  G  H  C  V  W  F  Q  G  L  G  Q  T  D  F  L  V  I  K  K  K  I  L  L  S  Y  S  V  P  L  S  L  F  V  Y  I  *  M  C  R  M  F  I  R  G  N  L  I  I  V  V  S  M  *  *  L  I  G  Y  P  G  K  P  F  E  K  Y  L  Y  C  D  I  D  R  G  K  K  W  S  S  E  R  *  L  D  M  T  N  L  *  L  T  M  D  M  I  P  K  *  E  D  I  G  V  D  H  *  G  R  T  L  V  S  S  P  T  L  F  S  F  L  I  I  V  L  L  V  S  Y  S  A  I  L  V  L  S  V  V  P  F  Y  F  C </first_frame>
            <second_frame>  F  P  H  K  S  F  S  F  S  R  N  H  T  R  I  Q  K  K  N  K  K  L  K  W  S  F  R  R  K  T  P  P  T  L  Q  S  C  L  Q  E  I  F  L  G  L  Y  V  G  V  T  Y  I  N  L  P  S  T  P  F  T  D  F  L  S  I  T  L  I  E  I  L  N  L  L  I  T  K  T  I  K  V  S  I  F  D  P  *  K  P  Q  I  S  L  Y  D  M  N  P  F  D  K  K  Q  E  S  D  T  D  T  K  T  P  F  L  T  E  M  D  S  E  F  A  A  F  S  P  I  S  L  P  F  A  D  P  S  S  P  F  I  N  F  G  S  F  A  T  P  L  S  Q  H  P  V  G  E  G  E  G  E  G  E  G  G  E  I  E  Q  P  A  E  G  G  L  G  V  P  Q  P  M  E  C  L  H  G  I  Q  I  P  P  F  L  S  K  T  F  D  L  V  E  D  P  L  L  D  T  I  I  S  W  G  R  N  G  E  S  F  V  V  W  D  P  V  E  F  S  R  L  V  L  P  R  N  F  K  H  S  N  F  S  S  F  V  R  Q  L  N  T  Y  :  G  F  R  K  I  D  A  D  R  W  E  F  A  N  E  G  F  S  R  G  K  R  H  L  L  K  N  I  Q  R  R  R  S  H  Q  G  G  S  S  S  G  S  S  A  E  A  G  K  G  T  M  D  E  I  E  K  L  R  N  E  K  S  L  M  M  Q  E  V  V  E  L  Q  Q  Q  Q  R  G  T  V  Q  Q  M  E  S  V  N  E  K  L  Q  A  A  E  Q  R  Q  K  Q  M  V  S  F  L  A  K  V  L  Q  N  P  T  F  L  A  R  V  R  Q  M  K  E  Q  G  E  I  T  S  P  R  T  M  R  K  F  V  K  H  Q  S  H  G  P  D  G  V  G  S  S  S  M  E  G  Q  I  V  K  F  R  S  D  F  Q  D  L  A  G  C  F  D  S  P  D  F  N  T  V  V  D  Q  Q  L  P  E  I  G  L  G  A  E  A  M  P  F  E  G  V  P  V  A  D  E  L  T  V  A  H  E  L  L  N  C  S  D  R  E  I  R  G  A  S  F  F  N  S  E  G  S  Q  F  K  G  K  N  V  A  S  P  Q  I  E  V  M  P  E  Y  F  A  S  F  P  E  E  M  G  K  E  K  N  V  S  G  F  S  T  P  A  I  G  S  M  V  K  D  E  E  L  W  G  M  G  F  E  A  S  A  G  M  P  S  T  G  A  E  L  W  D  S  R  S  S  Y  V  P  D  F  G  V  S  S  G  L  S  D  L  W  D  I  D  P  L  Q  V  A  G  S  S  G  V  D  K  W  P  A  D  G  S  P  F  G  Q  S  G  S  H  A  N  Q  P  K  N  D  S  F  *  E  R  V  P  L  G  L  Q  C  A  I  G  I  L  P  S  F  S  *  W  D  I  I  L  N  E  *  L  *  I  F  *  L  I  I  T  F  D  W  F  F  S  S  I  P  S  P  W  S  A  I  S  P  L  I  V  L  D  C  E  Y  L  M  A  *  I  V  D  I  S  C  *  H  I  L  F  *  V  V  K  Y  A  G  L  Q  H  *  R  R  V  W  D  F  F  R  E  F  R  T  *  M  S  E  *  H  C  S  L  K  L  F  P   : V  D  S  S  V  I  A  C  L  D  L  V  P  S  P  R  Q  S  N  D  V  H  Q  K  Q  L  A  K  S  F  S  G  L  S  S  G  G  K  G  R  G  K  F  K  P  C  I  M  R  T  K  P  D  I  *  V  D  I  V  F  G  S  K  G  W  A  R  L  I  S  W  L  S  R  K  R  S  C  S  A  I  R  F  P  L  A  Y  L  Y  I  S  K  C  V  G  C  S  S  G  A  I  *  L  L  L  C  Q  C  N  N  *  *  V  I  L  A  N  H  L  R  S  I  C  T  V  I  L  I  G  G  R  N  G  H  Q  K  G  D  *  T  *  Q  T  Y  S  L  P  W  I  *  F  L  N  K  R  I  L  G  L  I  I  R  V  E  H  *  *  V  V  Q  H  C  L  V  S  L  L  L  F  S  *  F  R  I  L  Q  F  *  Y  Y  L  L  F  L  F  I  F   </second_frame>
            <third_frame>   F  L  I  N  P  F  H  F  P  E  T  I  Q  E  S  K  K  K  I  K  N  *  N  G  A  S  G  E  K  L  H  R  L  Y  R  V  V  Y  R  R  Y  F  L  V  C  M  S  A  L  P  I  *  T  S  L  Q  P  L  L  P  T  F  Y  L  S  P  L  S  K  F  *  I  F  *  S  Q  K  L  L  K  F  Q  S  L  I  H  K  N  H  K  S  L  C  M  I  *  T  H  L  I  K  N  K  N  L  I  L  I  Q  K  P  H  F  *  L  K  W  T  L  N  L  L  R  F  H  Q  F  H  S  L  L  L  T  H  L  L  L  L  S  I  L  D  L  L  P  L  L  *  A  N  I  Q  L  E  K  G  K  E  K  E  K  G  E  K  L  N  S  Q  L  R  E  D  W  V  C  R  S  L  W  S  V  Y  M  G  Y  K  F  R  H  F  C  Q  R  L  L  I  W  L  R  T  L  Y  W  I  R  L  F  L  G  V  E  M  E  K  A  L  *  F  G  I  Q  W  S  F  Q  D  W  F  F  L  G  I  S  S  T  V  I  S  P  A  L  F  D  S  L  I  H  M :   D  F  A  K  S  M  L  T  G  G  S  L  R  M  K  G  S  R  E  G  R  G  I  C  *  R  T  Y  R  G  E  G  H  I  R  V  G  V  L  L  D  H  L  L  K  Q  G  K  V  L  W  M  R  *  R  N  S  G  M  R  R  V  *  *  C  R  K  L  L  S  C  S  S  S  S  V  E  Q  F  N  K  W  N  P  L  M  K  S  F  R  L  Q  N  K  D  R  S  R  W  F  H  S  W  P  R  C  F  K  I  P  H  S  W  L  V  F  G  R  *  R  S  K  E  K  L  L  V  Q  E  Q  *  G  N  L  L  N  I  S  H  M  V  R  M  E  W  G  R  L  Q  W  K  G  R  *  S  S  S  G  L  T  F  K  T  L  Q  D  A  L  T  A  Q  I  S  I  Q  L  W  I  N  N  S  Q  K  L  V  *  E  R  K  P  C  L  L  K  V  F  L  L  L  M  N  *  Q  W  H  M  N  F  L  I  V  Q  I  G  K  Y  E  E  L  H  S  L  T  P  K  A  L  N  S  K  G  R  M  *  L  V  L  K  *  K  L  C  P  S  T  L  P  L  F  Q  R  R  W  G  R  R  R  T  F  Q  D  F  P  H  Q  L  L  E  V  W  *  K  M  R  N  F  G  V  W  V  L  K  P  V  L  A  C  Q  A  L  V  P  S  Y  G  I  V  V  A  A  M  F  Q  T  L  V  L  A  L  V  C  Q  I  Y  G  I  *  I  P  C  R  *  L  E  V  L  G  S  I  S  G  Q  L  M  G  L  L  L  V  S  L  E  V  M  Q  T  S  P  R  M  I  V  S  R  K  E  Y  P  W  A  F  S  V  P  L  G  Y  C  H  H  L  V  D  G  T  *  Y  *  M  S  D  Y  K  Y  F  S  *  *  L  L  L  T  G  S  F  L  L  F  P  L  L  G  L  L  F  L  R  *  L  C  W  T  V  N  I  *  W  H  K  L  *  I  F  P  A  N  I  Y  S  F  K  L  *  N  T  Q  V  C  S  T  E  G  E  Y  G  T  S  L  E  N  F  G  L  E  *  V  N  D  I  A  R  S  S  F  F  Q  :  S  I  L  L  *  L  L  A  W  I  L  Y  P  R  L  G  K  A  M  M  Y  I  R  N  S  W  R  S  P  S  Q  G  L  A  Q  V  A  K  V  E  G  S  S  S  L  A  S  C  E  L  S  L  I  F  K  W  T  L  C  L  V  P  R  V  G  P  D  *  F  L  G  Y  Q  E  K  D  P  A  Q  L  F  G  S  P  *  L  I  C  I  Y  L  N  V  *  D  V  H  Q  G  Q  S  D  Y  C  C  V  N  V  I  I  D  R  L  S  W  Q  T  I  *  E  V  S  V  L  *  Y  *  *  G  E  E  M  V  I  R  K  V  I  R  H  D  K  L  I  A  Y  H  G  Y  D  S  *  I  R  G  Y  W  G  *  S  L  G  *  N  I  S  K  *  S  N  I  V  *  F  P  Y  Y  C  S  P  S  F  V  F  C  N  F  S  I  I  C  C  S  F  L  F  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09SLm0129J22.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54987" stop="54505"/>
                    <exon start="53778" stop="52717"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1542</number_coding_nucleotides>
                  <number_encoded_amino_acids>514</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KPQISLYDMNPFDKKQESDTDTKTPFLTEMDSEFAAFSPISLPFADPSSPFINFGSFATPLSQHPVGEGEGEGEGGEIEQPAEGGLGVPQPMECLHGIQIPPFLSKTFDLVEDPLLDTIISWGRNGESFVVWDPVEFSRLVLPRNFKHSNFSSFVRQLNTYGFRKIDADRWEFANEGFSRGKRHLLKNIQRRRSHQGGSSSGSSAEAGKGTMDEIEKLRNEKSLMMQEVVELQQQQRGTVQQMESVNEKLQAAEQRQKQMVSFLAKVLQNPTFLARVRQMKEQGEITSPRTMRKFVKHQSHGPDGVGSSSMEGQIVKFRSDFQDLAGCFDSPDFNTVVDQQLPEIGLGAEAMPFEGVPVADELTVAHELLNCSDREIRGASFFNSEGSQFKGKNVASPQIEVMPEYFASFPEEMGKEKNVSGFSTPAIGSMVKDEELWGMGFEASAGMPSTGAELWDSRSSYVPDFGVSSGLSDLWDIDPLQVAGSSGVDKWPADGSPFGQSGSHANQPKNDSF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09SLm0129J22.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55248" stop="54988"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FPHKSFSFSRNHTRIQKKNKKLKWSFRRKTPPTLQSCLQEIFLGLYVGVTYINLPSTPFTDFLSITLIEILNLLITKTIKVSIFDP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="55249" e_stop="53885"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="55249" e_stop="53885" e_length="1365"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55249" stop="54690"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476857" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55219" stop="54527"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E618700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55210" stop="54849"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E358676" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55200" stop="54819"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472153" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55191" stop="54595"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412321" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55191" stop="54804"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E470396" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55184" stop="54646"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729398" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55145" stop="54572"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207379" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55145" stop="54589"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212690" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55145" stop="54691"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55133" stop="54856"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472157" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54986" stop="54167"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E740148" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54952" stop="54428"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201223" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54910" stop="54267"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54689" stop="54050"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347162" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54647" stop="53885"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315254" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTTCCTCATAAATCCTTTTCATTTTCCAGAAACCATACAAGAATCCAAAAAAAAAATAAAAAATTAAAATGGAGCTTCAGGAGAAAAACTCCACCGACTTTACAGAGTTGTTTACAGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTCAACCCCTTTTACCGACTTTTTATCTATCACCCTTATCGAAATTTTGAATCTTTTGATCACAAAAACTATTAAAGTTTCAATCTTTGATCCATAAAAACCACAAATCTCTTTGTATGATATGAACCCATTTGATAAAAAACAAGAATCTGATACTGATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACATCCAGTTGGAGAAGGGGAAGGAGAAGGAGAAGGGGGAGAAATTGAACAGCCAGCTGAGGGAGGATTGGGTGTGCCGCAGCCTATGGAGTGTTTACATGGGATACAAATTCCGCCATTTTTGTCAAAGACTTTTGATTTGGTTGAGGACCCTTTATTGGATACGATTATTTCTTGGGGTAGAAATGGAGAAAGCTTTGTAGTTTGGGATCCAGTGGAGTTTTCAAGATTGGTTCTTCCTAGGAATTTCAAGCACAGTAATTTCTCCAGCTTTGTTCGACAGCTTAATACATATGTGGGTATTAATTTTAGCACACTGGCCAACTTTTTCTGGCTAATGTGTTAAATCTCTAGTTCTCTAACTCTGTCTCTCTTTTTAATGATATTTTTTCCTTGTATGTAATTTCTGTTGTAGTTTTTCATGTATCTTTATTTTTTCCCTCATTTTTCTGTAGTTTGTTTGCTCTTTTGTTGTTGATATACTGTAAAGATAATGTCTTAGGATGTAAATGTAAATAGATTTTTCGCGTTGTAAACAGTATAGGCTCCTGCGATTGTAAATGAGAGTTGGAGAACTGTTTTTTCTTCTTGATAGTTCAATGTTTTTGGCATCTTGTGTAAATGATGTCATTGAGATCTTTAGTGGATAGTAAAATGGTGGGTTCTTAAGTAAAATGGTAAAGAGGTGCGCTGTTCGTGATGTGGGCTTGTAGATAAAGCTCCCTGCATTGATGCATCTGCTGAGTTTGGGAGGTTCATCTATTGCTGCAGGTAGAATTCAAAGGTTCTGATTAAACAGAGTGTTTAAGCTTTGTAGTTTATATATGGTCTAACTTCAAAAGATCTACTAATTGTGTATTTCTAGTGTAATGCAGCTCCTGGAACTCATGAAAATTTGACAGTTAGCATCTTGCT</gDNA_template>
            <first_frame> V  S  S  *  I  L  F  I  F  Q  K  P  Y  K  N  P  K  K  K  *  K  I  K  M  E  L  Q  E  K  N  S  T  D  F  T  E  L  F  T  G  D  I  S  W  F  V  C  R  R  Y  L  Y  K  P  P  F  N  P  F  Y  R  L  F  I  Y  H  P  Y  R  N  F  E  S  F  D  H  K  N  Y  *  S  F  N  L  *  S  I  K  T  T  N  L  F  V  *  Y  E  P  I  *  *  K  T  R  I  *  Y  *  Y  K  N  P  I  F  D  *  N  G  L  *  I  C  C  V  F  T  N  F  T  P  F  C  *  P  I  F  S  F  Y  Q  F  W  I  F  C  H  S  F  E  P  T  S  S  W  R  R  G  R  R  R  R  R  G  R  N  *  T  A  S  *  G  R  I  G  C  A  A  A  Y  G  V  F  T  W  D  T  N  S  A  I  F  V  K  D  F  *  F  G  *  G  P  F  I  G  Y  D  Y  F  L  G  *  K  W  R  K  L  C  S  L  G  S  S  G  V  F  K  I  G  S  S  *  E  F  Q  A  Q  *  F  L  Q  L  C  S  T  A  *  Y  I  C  G  Y  *  F  *  H  T  G  Q  L  F  L  A  N  V  L  N  L  *  F  S  N  S  V  S  L  F  N  D  I  F  S  L  Y  V  I  S  V  V  V  F  H  V  S  L  F  F  P  S  F  F  C  S  L  F  A  L  L  L  L  I  Y  C  K  D  N  V  L  G  C  K  C  K  *  I  F  R  V  V  N  S  I  G  S  C  D  C  K  *  E  L  E  N  C  F  F  F  L  I  V  Q  C  F  W  H  L  V  *  M  M  S  L  R  S  L  V  D  S  K  M  V  G  S  *  V  K  W  *  R  G  A  L  F  V  M  W  A  C  R  *  S  S  L  H  *  C  I  C  *  V  W  E  V  H  L  L  L  Q  V  E  F  K  G  S  D  *  T  E  C  L  S  F  V  V  Y  I  W  S  N  F  K  R  S  T  N  C  V  F  L  V  *  C  S  S  W  N  S  *  K  F  D  S  *  H  L  A </first_frame>
            <second_frame>  F  P  H  K  S  F  S  F  S  R  N  H  T  R  I  Q  K  K  N  K  K  L  K  W  S  F  R  R  K  T  P  P  T  L  Q  S  C  L  Q  E  I  F  L  G  L  Y  V  G  V  T  Y  I  N  L  P  S  T  P  F  T  D  F  L  S  I  T  L  I  E  I  L  N  L  L  I  T  K  T  I  K  V  S  I  F  D  P  *  K  P  Q  I  S  L  Y  D  M  N  P  F  D  K  K  Q  E  S  D  T  D  T  K  T  P  F  L  T  E  M  D  S  E  F  A  A  F  S  P  I  S  L  P  F  A  D  P  S  S  P  F  I  N  F  G  S  F  A  T  P  L  S  Q  H  P  V  G  E  G  E  G  E  G  E  G  G  E  I  E  Q  P  A  E  G  G  L  G  V  P  Q  P  M  E  C  L  H  G  I  Q  I  P  P  F  L  S  K  T  F  D  L  V  E  D  P  L  L  D  T  I  I  S  W  G  R  N  G  E  S  F  V  V  W  D  P  V  E  F  S  R  L  V  L  P  R  N  F  K  H  S  N  F  S  S  F  V  R  Q  L  N  T  Y  V  G  I  N  F  S  T  L  A  N  F  F  W  L  M  C  *  I  S  S  S  L  T  L  S  L  F  L  M  I  F  F  P  C  M  *  F  L  L  *  F  F  M  Y  L  Y  F  F  P  H  F  S  V  V  C  L  L  F  C  C  *  Y  T  V  K  I  M  S  *  D  V  N  V  N  R  F  F  A  L  *  T  V  *  A  P  A  I  V  N  E  S  W  R  T  V  F  S  S  *  *  F  N  V  F  G  I  L  C  K  *  C  H  *  D  L  *  W  I  V  K  W  W  V  L  K  *  N  G  K  E  V  R  C  S  *  C  G  L  V  D  K  A  P  C  I  D  A  S  A  E  F  G  R  F  I  Y  C  C  R  *  N  S  K  V  L  I  K  Q  S  V  *  A  L  *  F  I  Y  G  L  T  S  K  D  L  L  I  V  Y  F  *  C  N  A  A  P  G  T  H  E  N  L  T  V  S  I  L   </second_frame>
            <third_frame>   F  L  I  N  P  F  H  F  P  E  T  I  Q  E  S  K  K  K  I  K  N  *  N  G  A  S  G  E  K  L  H  R  L  Y  R  V  V  Y  R  R  Y  F  L  V  C  M  S  A  L  P  I  *  T  S  L  Q  P  L  L  P  T  F  Y  L  S  P  L  S  K  F  *  I  F  *  S  Q  K  L  L  K  F  Q  S  L  I  H  K  N  H  K  S  L  C  M  I  *  T  H  L  I  K  N  K  N  L  I  L  I  Q  K  P  H  F  *  L  K  W  T  L  N  L  L  R  F  H  Q  F  H  S  L  L  L  T  H  L  L  L  L  S  I  L  D  L  L  P  L  L  *  A  N  I  Q  L  E  K  G  K  E  K  E  K  G  E  K  L  N  S  Q  L  R  E  D  W  V  C  R  S  L  W  S  V  Y  M  G  Y  K  F  R  H  F  C  Q  R  L  L  I  W  L  R  T  L  Y  W  I  R  L  F  L  G  V  E  M  E  K  A  L  *  F  G  I  Q  W  S  F  Q  D  W  F  F  L  G  I  S  S  T  V  I  S  P  A  L  F  D  S  L  I  H  M  W  V  L  I  L  A  H  W  P  T  F  S  G  *  C  V  K  S  L  V  L  *  L  C  L  S  F  *  *  Y  F  F  L  V  C  N  F  C  C  S  F  S  C  I  F  I  F  S  L  I  F  L  *  F  V  C  S  F  V  V  D  I  L  *  R  *  C  L  R  M  *  M  *  I  D  F  S  R  C  K  Q  Y  R  L  L  R  L  *  M  R  V  G  E  L  F  F  L  L  D  S  S  M  F  L  A  S  C  V  N  D  V  I  E  I  F  S  G  *  *  N  G  G  F  L  S  K  M  V  K  R  C  A  V  R  D  V  G  L  *  I  K  L  P  A  L  M  H  L  L  S  L  G  G  S  S  I  A  A  G  R  I  Q  R  F  *  L  N  R  V  F  K  L  C  S  L  Y  M  V  *  L  Q  K  I  Y  *  L  C  I  S  S  V  M  Q  L  L  E  L  M  K  I  *  Q  L  A  S  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09SLm0129J22.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54987" stop="54454"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>531</number_coding_nucleotides>
                  <number_encoded_amino_acids>177</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KPQISLYDMNPFDKKQESDTDTKTPFLTEMDSEFAAFSPISLPFADPSSPFINFGSFATPLSQHPVGEGEGEGEGGEIEQPAEGGLGVPQPMECLHGIQIPPFLSKTFDLVEDPLLDTIISWGRNGESFVVWDPVEFSRLVLPRNFKHSNFSSFVRQLNTYVGINFSTLANFFWLMC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09SLm0129J22.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55248" stop="54988"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FPHKSFSFSRNHTRIQKKNKKLKWSFRRKTPPTLQSCLQEIFLGLYVGVTYINLPSTPFTDFLSITLIEILNLLITKTIKVSIFDP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="55249" e_stop="54505"/>
            <exon e_start="52469" e_stop="52380"/>
            <exon e_start="50839" e_stop="50256"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.999" e_score="0.919"/>
          <exon-intron don_prob="0.999" acc_prob="0.956" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.919">
            <gDNA_exon_boundary e_start="55249" e_stop="54505" e_length="745"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="54504" i_stop="52470" i_length="2035"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="52469" e_stop="52380" e_length="90"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.956">
            <gDNA_intron_boundary i_start="52379" i_stop="50840" i_length="1540"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="50839" e_stop="50256" e_length="584"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55249" stop="54690"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476857" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55219" stop="54527"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E618700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55210" stop="54849"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E358676" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55200" stop="54819"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472153" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55191" stop="54595"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412321" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55191" stop="54804"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E470396" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55184" stop="54646"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729398" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55145" stop="54505"/>
              <exon start="52469" stop="52380"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55145" stop="54572"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207379" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55145" stop="54589"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212690" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55145" stop="54691"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55133" stop="54856"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472157" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52421" stop="52380"/>
              <exon start="50839" stop="50256"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249319" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTTCCTCATAAATCCTTTTCATTTTCCAGAAACCATACAAGAATCCAAAAAAAAAATAAAAAATTAAAATGGAGCTTCAGGAGAAAAACTCCACCGACTTTACAGAGTTGTTTACAGGAGATATTTCTTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTCAACCCCTTTTACCGACTTTTTATCTATCACCCTTATCGAAATTTTGAATCTTTTGATCACAAAAACTATTAAAGTTTCAATCTTTGATCCATAAAAACCACAAATCTCTTTGTATGATATGAACCCATTTGATAAAAAACAAGAATCTGATACTGATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTGACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACATCCAGTTGGAGAAGGGGAAGGAGAAGGAGAAGGGGGAGAAATTGAACAGCCAGCTGAGGGAGGATTGGGTGTGCCGCAGCCTATGGAGTGTTTACATGGGATACAAATTCCGCCATTTTTGTCAAAGACTTTTGATTTGGTTGAGGACCCTTTATTGGATACGATTATTTCTTGGGGTAGAAATGGAGAAAGCTTTGTAGTTTGGGATCCAGTGGAGTTTTCAAGATTGGTTCTTCCTAGGAATTTCAAGCACAGTAATTTCTCCAGCTTTGTTCGACAGCTTAATACATAT : GTTTGCAGCACTGAAGGCGAGTATGGGACTTCTTTAGAGAATTTCGGACTTGAATGAGTGAATGACATTGCTCGCTCAAGCTTTTTCCAG : TCGATTCTTCTGTAATTGCTTGCTTGGATCTTGTACCCTCGCCTAGGCAAAGCAATGATGTACATCAGAAACAGCTGGCGAAGTCCTTCTCAGGGCTTAGCTCAGGTGGCAAAGGTCGAGGGAAGTTCAAGCCTTGCATCATGCGAACTAAGCCTGATATTTAAGTGGACATTGTGTTTGGTTCCAAGGGTTGGGCCAGACTGATTTCTTGGTTATCAAGAAAAAGATCCTGCTCAGCTATTCGGTTCCCCTTAGCTTATTTGTATATATCTAAATGTGTAGGATGTTCATCAGGGGCAATCTGATTATTGTTGTGTCAATGTAATAATTGATAGGTTATCCTGGCAAACCATTTGAGAAGTATCTGTACTGTGATATTGATAGGGGGAAGAAATGGTCATCAGAAAGGTGATTAGACATGACAAACTTATAGCTTACCATGGATATGATTCCTAAATAAGAGGATATTGGGGTTGATCATTAGGGTAGAACATTAGTAAGTAGTCCAACATTGTTTAGTTTCCTTATTATTGTTCTCCTAGTTTCGTATTCTGCAATTTTAGTATTATCTGTTGTTCCTTTTT</gDNA_template>
            <first_frame> V  S  S  *  I  L  F  I  F  Q  K  P  Y  K  N  P  K  K  K  *  K  I  K  M  E  L  Q  E  K  N  S  T  D  F  T  E  L  F  T  G  D  I  S  W  F  V  C  R  R  Y  L  Y  K  P  P  F  N  P  F  Y  R  L  F  I  Y  H  P  Y  R  N  F  E  S  F  D  H  K  N  Y  *  S  F  N  L  *  S  I  K  T  T  N  L  F  V  *  Y  E  P  I  *  *  K  T  R  I  *  Y  *  Y  K  N  P  I  F  D  *  N  G  L  *  I  C  C  V  F  T  N  F  T  P  F  C  *  P  I  F  S  F  Y  Q  F  W  I  F  C  H  S  F  E  P  T  S  S  W  R  R  G  R  R  R  R  R  G  R  N  *  T  A  S  *  G  R  I  G  C  A  A  A  Y  G  V  F  T  W  D  T  N  S  A  I  F  V  K  D  F  *  F  G  *  G  P  F  I  G  Y  D  Y  F  L  G  *  K  W  R  K  L  C  S  L  G  S  S  G  V  F  K  I  G  S  S  *  E  F  Q  A  Q  *  F  L  Q  L  C  S  T  A  *  Y  I   : C  L  Q  H  *  R  R  V  W  D  F  F  R  E  F  R  T  *  M  S  E  *  H  C  S  L  K  L  F  P   : V  D  S  S  V  I  A  C  L  D  L  V  P  S  P  R  Q  S  N  D  V  H  Q  K  Q  L  A  K  S  F  S  G  L  S  S  G  G  K  G  R  G  K  F  K  P  C  I  M  R  T  K  P  D  I  *  V  D  I  V  F  G  S  K  G  W  A  R  L  I  S  W  L  S  R  K  R  S  C  S  A  I  R  F  P  L  A  Y  L  Y  I  S  K  C  V  G  C  S  S  G  A  I  *  L  L  L  C  Q  C  N  N  *  *  V  I  L  A  N  H  L  R  S  I  C  T  V  I  L  I  G  G  R  N  G  H  Q  K  G  D  *  T  *  Q  T  Y  S  L  P  W  I  *  F  L  N  K  R  I  L  G  L  I  I  R  V  E  H  *  *  V  V  Q  H  C  L  V  S  L  L  L  F  S  *  F  R  I  L  Q  F  *  Y  Y  L  L  F  L  F </first_frame>
            <second_frame>  F  P  H  K  S  F  S  F  S  R  N  H  T  R  I  Q  K  K  N  K  K  L  K  W  S  F  R  R  K  T  P  P  T  L  Q  S  C  L  Q  E  I  F  L  G  L  Y  V  G  V  T  Y  I  N  L  P  S  T  P  F  T  D  F  L  S  I  T  L  I  E  I  L  N  L  L  I  T  K  T  I  K  V  S  I  F  D  P  *  K  P  Q  I  S  L  Y  D  M  N  P  F  D  K  K  Q  E  S  D  T  D  T  K  T  P  F  L  T  E  M  D  S  E  F  A  A  F  S  P  I  S  L  P  F  A  D  P  S  S  P  F  I  N  F  G  S  F  A  T  P  L  S  Q  H  P  V  G  E  G  E  G  E  G  E  G  G  E  I  E  Q  P  A  E  G  G  L  G  V  P  Q  P  M  E  C  L  H  G  I  Q  I  P  P  F  L  S  K  T  F  D  L  V  E  D  P  L  L  D  T  I  I  S  W  G  R  N  G  E  S  F  V  V  W  D  P  V  E  F  S  R  L  V  L  P  R  N  F  K  H  S  N  F  S  S  F  V  R  Q  L  N  T  Y  :  V  C  S  T  E  G  E  Y  G  T  S  L  E  N  F  G  L  E  *  V  N  D  I  A  R  S  S  F  F  Q  :  S  I  L  L  *  L  L  A  W  I  L  Y  P  R  L  G  K  A  M  M  Y  I  R  N  S  W  R  S  P  S  Q  G  L  A  Q  V  A  K  V  E  G  S  S  S  L  A  S  C  E  L  S  L  I  F  K  W  T  L  C  L  V  P  R  V  G  P  D  *  F  L  G  Y  Q  E  K  D  P  A  Q  L  F  G  S  P  *  L  I  C  I  Y  L  N  V  *  D  V  H  Q  G  Q  S  D  Y  C  C  V  N  V  I  I  D  R  L  S  W  Q  T  I  *  E  V  S  V  L  *  Y  *  *  G  E  E  M  V  I  R  K  V  I  R  H  D  K  L  I  A  Y  H  G  Y  D  S  *  I  R  G  Y  W  G  *  S  L  G  *  N  I  S  K  *  S  N  I  V  *  F  P  Y  Y  C  S  P  S  F  V  F  C  N  F  S  I  I  C  C  S  F   </second_frame>
            <third_frame>   F  L  I  N  P  F  H  F  P  E  T  I  Q  E  S  K  K  K  I  K  N  *  N  G  A  S  G  E  K  L  H  R  L  Y  R  V  V  Y  R  R  Y  F  L  V  C  M  S  A  L  P  I  *  T  S  L  Q  P  L  L  P  T  F  Y  L  S  P  L  S  K  F  *  I  F  *  S  Q  K  L  L  K  F  Q  S  L  I  H  K  N  H  K  S  L  C  M  I  *  T  H  L  I  K  N  K  N  L  I  L  I  Q  K  P  H  F  *  L  K  W  T  L  N  L  L  R  F  H  Q  F  H  S  L  L  L  T  H  L  L  L  L  S  I  L  D  L  L  P  L  L  *  A  N  I  Q  L  E  K  G  K  E  K  E  K  G  E  K  L  N  S  Q  L  R  E  D  W  V  C  R  S  L  W  S  V  Y  M  G  Y  K  F  R  H  F  C  Q  R  L  L  I  W  L  R  T  L  Y  W  I  R  L  F  L  G  V  E  M  E  K  A  L  *  F  G  I  Q  W  S  F  Q  D  W  F  F  L  G  I  S  S  T  V  I  S  P  A  L  F  D  S  L  I  H  M :   F  A  A  L  K  A  S  M  G  L  L  *  R  I  S  D  L  N  E  *  M  T  L  L  A  Q  A  F  S  S :   R  F  F  C  N  C  L  L  G  S  C  T  L  A  *  A  K  Q  *  C  T  S  E  T  A  G  E  V  L  L  R  A  *  L  R  W  Q  R  S  R  E  V  Q  A  L  H  H  A  N  *  A  *  Y  L  S  G  H  C  V  W  F  Q  G  L  G  Q  T  D  F  L  V  I  K  K  K  I  L  L  S  Y  S  V  P  L  S  L  F  V  Y  I  *  M  C  R  M  F  I  R  G  N  L  I  I  V  V  S  M  *  *  L  I  G  Y  P  G  K  P  F  E  K  Y  L  Y  C  D  I  D  R  G  K  K  W  S  S  E  R  *  L  D  M  T  N  L  *  L  T  M  D  M  I  P  K  *  E  D  I  G  V  D  H  *  G  R  T  L  V  S  S  P  T  L  F  S  F  L  I  I  V  L  L  V  S  Y  S  A  I  L  V  L  S  V  V  P  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09SLm0129J22.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54987" stop="54505"/>
                    <exon start="52469" stop="52413"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>537</number_coding_nucleotides>
                  <number_encoded_amino_acids>179</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KPQISLYDMNPFDKKQESDTDTKTPFLTEMDSEFAAFSPISLPFADPSSPFINFGSFATPLSQHPVGEGEGEGEGGEIEQPAEGGLGVPQPMECLHGIQIPPFLSKTFDLVEDPLLDTIISWGRNGESFVVWDPVEFSRLVLPRNFKHSNFSSFVRQLNTYVCSTEGEYGTSLENFGLE*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09SLm0129J22.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55248" stop="54988"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FPHKSFSFSRNHTRIQKKNKKLKWSFRRKTPPTLQSCLQEIFLGLYVGVTYINLPSTPFTDFLSITLIEILNLLITKTIKVSIFDP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="52621" PGL_stop="53203"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="52621" e_stop="53203"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.926"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.926">
            <gDNA_exon_boundary e_start="52621" e_stop="53203" e_length="583"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52621" stop="53203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575527" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTAAAATATTTATAATCACTCATTCAATATTATGTCCCATCAACTAAATGATGGCAGTATCCCAATGGCACACTGAAGGCCCAAGGGTACTCTTTCCTAGAAACTATCATTCTTGGGCTGGTTTGCATGACTTCCAGACTGACCAAAAGGAGACCCATCAGCTGGCCACTTATCGACCCCAGAACTTCCAGCTACCTGCAAGGGATCTATATCCCATAAATCTGACAAACCAGAGCTAACACCAAAGTCTGGAACATAGCTGCTACGACTATCCCATAACTCGGCACCAGTGCTTGGCATGCCAGCACTGGCTTCAAAACCCATACCCCAAAGTTCCTCATCTTTCACCATACTTCCAATAGCTGGTGTGGAAAATCCTGAAACGTTCTTCTCCTTCCCCATCTCCTCTGGAAAAGAGGCAAAGTACTCGGGCATAACTTCTATTTGAGGACTAGCTACATTCTTCCCTTTGAATTGAGAGCCTTCGGAGTTAAAGAATGAAGCTCCTCGTATTTCCCGATCTGAACAATTAAGAAGTTCATGTGCCACTGTCAGTTCATCAGCAACAGGAACACCTTCAAAA</gDNA_template>
            <first_frame> L  K  Y  L  *  S  L  I  Q  Y  Y  V  P  S  T  K  *  W  Q  Y  P  N  G  T  L  K  A  Q  G  Y  S  F  L  E  T  I  I  L  G  L  V  C  M  T  S  R  L  T  K  R  R  P  I  S  W  P  L  I  D  P  R  T  S  S  Y  L  Q  G  I  Y  I  P  *  I  *  Q  T  R  A  N  T  K  V  W  N  I  A  A  T  T  I  P  *  L  G  T  S  A  W  H  A  S  T  G  F  K  T  H  T  P  K  F  L  I  F  H  H  T  S  N  S  W  C  G  K  S  *  N  V  L  L  L  P  H  L  L  W  K  R  G  K  V  L  G  H  N  F  Y  L  R  T  S  Y  I  L  P  F  E  L  R  A  F  G  V  K  E  *  S  S  S  Y  F  P  I  *  T  I  K  K  F  M  C  H  C  Q  F  I  S  N  R  N  T  F  K  </first_frame>
            <second_frame>  *  N  I  Y  N  H  S  F  N  I  M  S  H  Q  L  N  D  G  S  I  P  M  A  H  *  R  P  K  G  T  L  S  *  K  L  S  F  L  G  W  F  A  *  L  P  D  *  P  K  G  D  P  S  A  G  H  L  S  T  P  E  L  P  A  T  C  K  G  S  I  S  H  K  S  D  K  P  E  L  T  P  K  S  G  T  *  L  L  R  L  S  H  N  S  A  P  V  L  G  M  P  A  L  A  S  K  P  I  P  Q  S  S  S  S  F  T  I  L  P  I  A  G  V  E  N  P  E  T  F  F  S  F  P  I  S  S  G  K  E  A  K  Y  S  G  I  T  S  I  *  G  L  A  T  F  F  P  L  N  *  E  P  S  E  L  K  N  E  A  P  R  I  S  R  S  E  Q  L  R  S  S  C  A  T  V  S  S  S  A  T  G  T  P  S  K </second_frame>
            <third_frame>   K  I  F  I  I  T  H  S  I  L  C  P  I  N  *  M  M  A  V  S  Q  W  H  T  E  G  P  R  V  L  F  P  R  N  Y  H  S  W  A  G  L  H  D  F  Q  T  D  Q  K  E  T  H  Q  L  A  T  Y  R  P  Q  N  F  Q  L  P  A  R  D  L  Y  P  I  N  L  T  N  Q  S  *  H  Q  S  L  E  H  S  C  Y  D  Y  P  I  T  R  H  Q  C  L  A  C  Q  H  W  L  Q  N  P  Y  P  K  V  P  H  L  S  P  Y  F  Q  *  L  V  W  K  I  L  K  R  S  S  P  S  P  S  P  L  E  K  R  Q  S  T  R  A  *  L  L  F  E  D  *  L  H  S  S  L  *  I  E  S  L  R  S  *  R  M  K  L  L  V  F  P  D  L  N  N  *  E  V  H  V  P  L  S  V  H  Q  Q  Q  E  H  L  Q   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09SLm0129J22.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="54258" PGL_stop="54798"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="54258" e_stop="54798"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.926"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.926">
            <gDNA_exon_boundary e_start="54258" e_stop="54798" e_length="541"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54258" stop="54798"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412322" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATACTGTTTACAACGCGAAAAATCTATTTACATTTACATCCTAAGACATTATCTTTACAGTATATCAACAACAAAAGAGCAAACAAACTACAGAAAAATGAGGGAAAAAATAAAGATACATGAAAAACTACAACAGAAATTACATACAAGGAAAAAATATCATTAAAAAGAGAGACAGAGTTAGAGAACTAGAGATTTAACACATTAGCCAGAAAAAGTTGGCCAGTGTGCTAAAATTAATACCCACATATGTATTAAGCTGTCGAACAAAGCTGGAGAAATTACTGTGCTTGAAATTCCTAGGAAGAACCAATCTTGAAAACTCCACTGGATCCCAAACTACAAAGCTTTCTCCATTTCTACCCCAAGAAATAATCGTATCCAATAAAGGGTCCTCAACCAAATCAAAAGTCTTTGACAAAAATGGCGGAATTTGTATCCCATGTAAACACTCCATAGGCTGCGGCACACCCAATCCTCCCTCAGCTGGCTGTTCAATTTCTCCCCCTTCTCCTTCTCCTTCCCCTTCTCCAACTGGATG</gDNA_template>
            <first_frame> I  L  F  T  T  R  K  I  Y  L  H  L  H  P  K  T  L  S  L  Q  Y  I  N  N  K  R  A  N  K  L  Q  K  N  E  G  K  N  K  D  T  *  K  T  T  T  E  I  T  Y  K  E  K  I  S  L  K  R  E  T  E  L  E  N  *  R  F  N  T  L  A  R  K  S  W  P  V  C  *  N  *  Y  P  H  M  Y  *  A  V  E  Q  S  W  R  N  Y  C  A  *  N  S  *  E  E  P  I  L  K  T  P  L  D  P  K  L  Q  S  F  L  H  F  Y  P  K  K  *  S  Y  P  I  K  G  P  Q  P  N  Q  K  S  L  T  K  M  A  E  F  V  S  H  V  N  T  P  *  A  A  A  H  P  I  L  P  Q  L  A  V  Q  F  L  P  L  L  L  L  L  P  L  L  Q  L  D  </first_frame>
            <second_frame>  Y  C  L  Q  R  E  K  S  I  Y  I  Y  I  L  R  H  Y  L  Y  S  I  S  T  T  K  E  Q  T  N  Y  R  K  M  R  E  K  I  K  I  H  E  K  L  Q  Q  K  L  H  T  R  K  K  Y  H  *  K  E  R  Q  S  *  R  T  R  D  L  T  H  *  P  E  K  V  G  Q  C  A  K  I  N  T  H  I  C  I  K  L  S  N  K  A  G  E  I  T  V  L  E  I  P  R  K  N  Q  S  *  K  L  H  W  I  P  N  Y  K  A  F  S  I  S  T  P  R  N  N  R  I  Q  *  R  V  L  N  Q  I  K  S  L  *  Q  K  W  R  N  L  Y  P  M  *  T  L  H  R  L  R  H  T  Q  S  S  L  S  W  L  F  N  F  S  P  F  S  F  S  F  P  F  S  N  W  M </second_frame>
            <third_frame>   T  V  Y  N  A  K  N  L  F  T  F  T  S  *  D  I  I  F  T  V  Y  Q  Q  Q  K  S  K  Q  T  T  E  K  *  G  K  K  *  R  Y  M  K  N  Y  N  R  N  Y  I  Q  G  K  N  I  I  K  K  R  D  R  V  R  E  L  E  I  *  H  I  S  Q  K  K  L  A  S  V  L  K  L  I  P  T  Y  V  L  S  C  R  T  K  L  E  K  L  L  C  L  K  F  L  G  R  T  N  L  E  N  S  T  G  S  Q  T  T  K  L  S  P  F  L  P  Q  E  I  I  V  S  N  K  G  S  S  T  K  S  K  V  F  D  K  N  G  G  I  C  I  P  C  K  H  S  I  G  C  G  T  P  N  P  P  S  A  G  C  S  I  S  P  P  S  P  S  P  S  P  S  P  T  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09SLm0129J22.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54458" stop="54796"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>339</number_coding_nucleotides>
                  <number_encoded_amino_acids>113</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HISQKKLASVLKLIPTYVLSCRTKLEKLLCLKFLGRTNLENSTGSQTTKLSPFLPQEIIVSNKGSSTKSKVFDKNGGICIPCKHSIGCGTPNPPSAGCSISPPSPSPSPSPTG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="61418" PGL_stop="62256"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="61418" e_stop="62256"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="61418" e_stop="62256" e_length="839"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61418" stop="62256"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717627" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATATATATAGGAGCTACACTTTTACCCAAATCAATCAAAAACCCTATCTCCTATTCCAATTTACAGCTGAAAATCCCCAATTGAAGCTCACAATTTCAGTTCTGTATATATATAACGATCAGATTTAGTCTCTTTGATTCGAGTTGTTCTTGAAATTTACATGAAATTAGTAATAAGCAGTGATTTTGTTGTTTGTTTTGATTTTGCGTTTTTTTTAATAGCAATTTTGGATGTAACCGATGTAAAATAGTTTGAATTTAGGGTTAGTTTTTTCTTTTATTATTTGATGATTGTTTGGATAAAGTGATGGAAATGGAGGGTTCTCGTAGACCATTTGATAGATCAAGATTGGAGCCAGGACCTAAGAAACCAAGATTAGTCGAAGCCCCAATTGGAACTGAGCGAGGTTCTAATGGGAGAAGCTTTATTCCTCAACGGGGAGCTGGGAATTCGAGGATTCGAGCTAGTGATAAAGGGGGAGACTCGGAAAACAGTGATTCGATTCGCGGGTCTTTTCAACAGCAGACGCAGCATCAGGAGCTAGTGAGTCAATATAAGACGGCTTTAGCTGAACTAACATTTAATTCAAAGCCGATAATTACAAACTTGACTATTATTGCTGGTGAGAATTTGCAAGCGGCCAAGGCAATTGCTGCTACTATCTGCAACAACATTATTGAGGTGATATTCCGGTTTTAAATGCTACTGTGTCAATGTTGTTGATTTTGTTTAATTTAGTGTGTTTTATTACTTGGTTGTACAGAAGTGAAATCTGATAAAGAAGGCAAAGTTAGATTTATGATATTTTAGATTAGTGCAGCTGGTGTAATGAGTGTTGT</gDNA_template>
            <first_frame> I  Y  I  G  A  T  L  L  P  K  S  I  K  N  P  I  S  Y  S  N  L  Q  L  K  I  P  N  *  S  S  Q  F  Q  F  C  I  Y  I  T  I  R  F  S  L  F  D  S  S  C  S  *  N  L  H  E  I  S  N  K  Q  *  F  C  C  L  F  *  F  C  V  F  F  N  S  N  F  G  C  N  R  C  K  I  V  *  I  *  G  *  F  F  L  L  L  F  D  D  C  L  D  K  V  M  E  M  E  G  S  R  R  P  F  D  R  S  R  L  E  P  G  P  K  K  P  R  L  V  E  A  P  I  G  T  E  R  G  S  N  G  R  S  F  I  P  Q  R  G  A  G  N  S  R  I  R  A  S  D  K  G  G  D  S  E  N  S  D  S  I  R  G  S  F  Q  Q  Q  T  Q  H  Q  E  L  V  S  Q  Y  K  T  A  L  A  E  L  T  F  N  S  K  P  I  I  T  N  L  T  I  I  A  G  E  N  L  Q  A  A  K  A  I  A  A  T  I  C  N  N  I  I  E  V  I  F  R  F  *  M  L  L  C  Q  C  C  *  F  C  L  I  *  C  V  L  L  L  G  C  T  E  V  K  S  D  K  E  G  K  V  R  F  M  I  F  *  I  S  A  A  G  V  M  S  V   </first_frame>
            <second_frame>  Y  I  *  E  L  H  F  Y  P  N  Q  S  K  T  L  S  P  I  P  I  Y  S  *  K  S  P  I  E  A  H  N  F  S  S  V  Y  I  *  R  S  D  L  V  S  L  I  R  V  V  L  E  I  Y  M  K  L  V  I  S  S  D  F  V  V  C  F  D  F  A  F  F  L  I  A  I  L  D  V  T  D  V  K  *  F  E  F  R  V  S  F  F  F  Y  Y  L  M  I  V  W  I  K  *  W  K  W  R  V  L  V  D  H  L  I  D  Q  D  W  S  Q  D  L  R  N  Q  D  *  S  K  P  Q  L  E  L  S  E  V  L  M  G  E  A  L  F  L  N  G  E  L  G  I  R  G  F  E  L  V  I  K  G  E  T  R  K  T  V  I  R  F  A  G  L  F  N  S  R  R  S  I  R  S  *  *  V  N  I  R  R  L  *  L  N  *  H  L  I  Q  S  R  *  L  Q  T  *  L  L  L  L  V  R  I  C  K  R  P  R  Q  L  L  L  L  S  A  T  T  L  L  R  *  Y  S  G  F  K  C  Y  C  V  N  V  V  D  F  V  *  F  S  V  F  Y  Y  L  V  V  Q  K  *  N  L  I  K  K  A  K  L  D  L  *  Y  F  R  L  V  Q  L  V  *  *  V  L  </second_frame>
            <third_frame>   I  Y  R  S  Y  T  F  T  Q  I  N  Q  K  P  Y  L  L  F  Q  F  T  A  E  N  P  Q  L  K  L  T  I  S  V  L  Y  I  Y  N  D  Q  I  *  S  L  *  F  E  L  F  L  K  F  T  *  N  *  *  *  A  V  I  L  L  F  V  L  I  L  R  F  F  *  *  Q  F  W  M  *  P  M  *  N  S  L  N  L  G  L  V  F  S  F  I  I  *  *  L  F  G  *  S  D  G  N  G  G  F  S  *  T  I  *  *  I  K  I  G  A  R  T  *  E  T  K  I  S  R  S  P  N  W  N  *  A  R  F  *  W  E  K  L  Y  S  S  T  G  S  W  E  F  E  D  S  S  *  *  *  R  G  R  L  G  K  Q  *  F  D  S  R  V  F  S  T  A  D  A  A  S  G  A  S  E  S  I  *  D  G  F  S  *  T  N  I  *  F  K  A  D  N  Y  K  L  D  Y  Y  C  W  *  E  F  A  S  G  Q  G  N  C  C  Y  Y  L  Q  Q  H  Y  *  G  D  I  P  V  L  N  A  T  V  S  M  L  L  I  L  F  N  L  V  C  F  I  T  W  L  Y  R  S  E  I  *  *  R  R  Q  S  *  I  Y  D  I  L  D  *  C  S  W  C  N  E  C  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09SLm0129J22.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61685" stop="62116"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>429</number_coding_nucleotides>
                  <number_encoded_amino_acids>143</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFLLLFDDCLDKVMEMEGSRRPFDRSRLEPGPKKPRLVEAPIGTERGSNGRSFIPQRGAGNSRIRASDKGGDSENSDSIRGSFQQQTQHQELVSQYKTALAELTFNSKPIITNLTIIAGENLQAAKAIAATICNNIIEVIFRF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="66893" PGL_stop="69317"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="66893" e_stop="68480"/>
            <exon e_start="69121" e_stop="69317"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.923" acc_prob="0.965" e_score="0.933"/>
          <exon-only e_score="0.883"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.933">
            <gDNA_exon_boundary e_start="66893" e_stop="68480" e_length="1588"/>
          </exon>
          <intron i_serial="1" don_prob="0.923" acc_prob="0.965">
            <gDNA_intron_boundary i_start="68481" i_stop="69120" i_length="640"/>
          </intron>
          <exon e_serial="2" e_score="0.883">
            <gDNA_exon_boundary e_start="69121" e_stop="69317" e_length="197"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66893" stop="67469"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203123" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66893" stop="67433"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203430" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67450" stop="68155"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E561779" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67539" stop="67898"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244943" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67980" stop="68404"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E401966" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67981" stop="68480"/>
              <exon start="69121" stop="69317"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E432655" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68136" stop="68480"/>
              <exon start="69121" stop="69283"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203431" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68144" stop="68480"/>
              <exon start="69121" stop="69270"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203124" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68322" stop="68480"/>
              <exon start="69121" stop="69270"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277297" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCATGTTGGAACGCAAAATATTGGGCCGATGAATGCAACTCTGGAATCCAGGGGATCCATAGTGCAACAGGGAGAGACTCTCAGAGCTGCCTCTCCCTCTGCTCAGTCACCAATGCATCACCTTCCTCCATCCCCATCACTTATAACAAGCAACAGTAATCAAGTAATTAACAGTCCCGCTGAGCAGTACCAGATGCAAACCAGTTCTCGTTCTGATCCAAGACTATCCCAAATCTCAAGGAGGTCAAATCTAGATCCTCGTAACCAGTATGCCCAGGAATCTCTGACAATGCCATCTCGGAATACCATTTCAGTTAATTCACAAAGACAACACCCTCCAAGTTTGCAGAATTCGTCTGCCTTGTCTTCTTCTCATCAGTTGAGACAGAAGGTTCAGCGGGAAAGCCTGGAATCTGAATATTCTGTACAAACCAAGAATTCAACAGTTCCTGAGATTTCAGGTTTTCCTGATCCCTCTAGCACTAGCAGTTTGTTGGCTGCTGTTTTGAAGAGTGGAGTCATTGGTAATAAATCGAGTTCTGGTACTACGTCAAGTTCTCTTGATAAGGGTGCTCTCTCATCCCAAGCCAGTGCACAGCCTCATCCCGCCCAGTTTTCCACATCTGGGCCTAGGATACCGCCGGCCTCTGTCACTAGTCTATCAATGGACAGAAATGCTTCGAACTCTCCAAATTATTCCCAGAGAAATGTAGAACAGCCACCATTGCCACCTGGTCTGCCTCCAACTCTTGCAGGTACTGCATCATCGCAGACGCCGAATGCACCAAATATTGCTTCCAGTCCTCTTTCAAGTATTTTGAGTACATTGGTGGCGAAGGGGTTAATATCCGCATCAAAGAAGGACCCTCCTATTTATACTCCTTCAGATACACCTCCTCAAACTCAGAACCTTATTCCACCTGCAAGTTCCATTTCAACTCCTGCTTTATCTGCTCCAACATCTTCATCTGTTCCTTCTTCAGCTCATAAGGATGAACTTTCACACTCGAAACCTTCTGCTGAAACTCCTGAGGTCTTACTTCAGTCCATGAAAGAAGAGGCAAAAAGTCTCATTGGGCTTGTATTTAAGCCAGATGTGATTCGGAATTCTCATCCTGCTGTGATCAGTGACCTTGTTGATGATGTTCCACTTCAGTGTGGAATATGCGGTTTTGGATTTAAATTCCAAGTGAAACTTGATAGACACTTGGAATGGCACTCATTGAGAAATCCAGATGTCAAACTGTTGAATAATTCAAGAAAGTGGTATTTAAATTCTGGGGAATGGATTGCTGCATTTGGTGGCCTCCCTTGTGGCGATAAATCTGAAGGGCCAGCTGGAGGTTCTAGTGAGACATCAGAATGTACTGAGACCATGGTTCCTGCAGATGAATGTCAATGTGTGTGTGTTTTGTGTGGTGAGTTTTTTGAAGACTTCTACAATGAAGAAAGTGATGAATGGATGTTCAAAGATGCTGTTTACATGAGTATTCCAAGTGAAAGTGATTGTCAGGGTCCGATAGTCCACAAGAACTGTATTTCAGAAAGTTCTTGTCAAGAGTTGGGGTTTGCCTAGGATATAAAACTG : GTGTTGGATGCTTGATTTTTGTCTCTTAATCGAAGACAACCAGGTTCATTTTGAATTACTTGTAATGATTATACATCTTCTTGCTTAGTAAGCCTCTTCCATGCTTTTGTTTGAAACGACAATGAAATGGAAATTCTAGATACTAGAACAGTTTGCGCATCATATCTTCCTCAATTTGATACTTTCTGTCCACTTAC</gDNA_template>
            <first_frame> P  C  W  N  A  K  Y  W  A  D  E  C  N  S  G  I  Q  G  I  H  S  A  T  G  R  D  S  Q  S  C  L  S  L  C  S  V  T  N  A  S  P  S  S  I  P  I  T  Y  N  K  Q  Q  *  S  S  N  *  Q  S  R  *  A  V  P  D  A  N  Q  F  S  F  *  S  K  T  I  P  N  L  K  E  V  K  S  R  S  S  *  P  V  C  P  G  I  S  D  N  A  I  S  E  Y  H  F  S  *  F  T  K  T  T  P  S  K  F  A  E  F  V  C  L  V  F  F  S  S  V  E  T  E  G  S  A  G  K  P  G  I  *  I  F  C  T  N  Q  E  F  N  S  S  *  D  F  R  F  S  *  S  L  *  H  *  Q  F  V  G  C  C  F  E  E  W  S  H  W  *  *  I  E  F  W  Y  Y  V  K  F  S  *  *  G  C  S  L  I  P  S  Q  C  T  A  S  S  R  P  V  F  H  I  W  A  *  D  T  A  G  L  C  H  *  S  I  N  G  Q  K  C  F  E  L  S  K  L  F  P  E  K  C  R  T  A  T  I  A  T  W  S  A  S  N  S  C  R  Y  C  I  I  A  D  A  E  C  T  K  Y  C  F  Q  S  S  F  K  Y  F  E  Y  I  G  G  E  G  V  N  I  R  I  K  E  G  P  S  Y  L  Y  S  F  R  Y  T  S  S  N  S  E  P  Y  S  T  C  K  F  H  F  N  S  C  F  I  C  S  N  I  F  I  C  S  F  F  S  S  *  G  *  T  F  T  L  E  T  F  C  *  N  S  *  G  L  T  S  V  H  E  R  R  G  K  K  S  H  W  A  C  I  *  A  R  C  D  S  E  F  S  S  C  C  D  Q  *  P  C  *  *  C  S  T  S  V  W  N  M  R  F  W  I  *  I  P  S  E  T  *  *  T  L  G  M  A  L  I  E  K  S  R  C  Q  T  V  E  *  F  K  K  V  V  F  K  F  W  G  M  D  C  C  I  W  W  P  P  L  W  R  *  I  *  R  A  S  W  R  F  *  *  D  I  R  M  Y  *  D  H  G  S  C  R  *  M  S  M  C  V  C  F  V  W  *  V  F  *  R  L  L  Q  *  R  K  *  *  M  D  V  Q  R  C  C  L  H  E  Y  S  K  *  K  *  L  S  G  S  D  S  P  Q  E  L  Y  F  R  K  F  L  S  R  V  G  V  C  L  G  Y  K  T   : G  V  G  C  L  I  F  V  S  *  S  K  T  T  R  F  I  L  N  Y  L  *  *  L  Y  I  F  L  L  S  K  P  L  P  C  F  C  L  K  R  Q  *  N  G  N  S  R  Y  *  N  S  L  R  I  I  S  S  S  I  *  Y  F  L  S  T  Y </first_frame>
            <second_frame>  H  V  G  T  Q  N  I  G  P  M  N  A  T  L  E  S  R  G  S  I  V  Q  Q  G  E  T  L  R  A  A  S  P  S  A  Q  S  P  M  H  H  L  P  P  S  P  S  L  I  T  S  N  S  N  Q  V  I  N  S  P  A  E  Q  Y  Q  M  Q  T  S  S  R  S  D  P  R  L  S  Q  I  S  R  R  S  N  L  D  P  R  N  Q  Y  A  Q  E  S  L  T  M  P  S  R  N  T  I  S  V  N  S  Q  R  Q  H  P  P  S  L  Q  N  S  S  A  L  S  S  S  H  Q  L  R  Q  K  V  Q  R  E  S  L  E  S  E  Y  S  V  Q  T  K  N  S  T  V  P  E  I  S  G  F  P  D  P  S  S  T  S  S  L  L  A  A  V  L  K  S  G  V  I  G  N  K  S  S  S  G  T  T  S  S  S  L  D  K  G  A  L  S  S  Q  A  S  A  Q  P  H  P  A  Q  F  S  T  S  G  P  R  I  P  P  A  S  V  T  S  L  S  M  D  R  N  A  S  N  S  P  N  Y  S  Q  R  N  V  E  Q  P  P  L  P  P  G  L  P  P  T  L  A  G  T  A  S  S  Q  T  P  N  A  P  N  I  A  S  S  P  L  S  S  I  L  S  T  L  V  A  K  G  L  I  S  A  S  K  K  D  P  P  I  Y  T  P  S  D  T  P  P  Q  T  Q  N  L  I  P  P  A  S  S  I  S  T  P  A  L  S  A  P  T  S  S  S  V  P  S  S  A  H  K  D  E  L  S  H  S  K  P  S  A  E  T  P  E  V  L  L  Q  S  M  K  E  E  A  K  S  L  I  G  L  V  F  K  P  D  V  I  R  N  S  H  P  A  V  I  S  D  L  V  D  D  V  P  L  Q  C  G  I  C  G  F  G  F  K  F  Q  V  K  L  D  R  H  L  E  W  H  S  L  R  N  P  D  V  K  L  L  N  N  S  R  K  W  Y  L  N  S  G  E  W  I  A  A  F  G  G  L  P  C  G  D  K  S  E  G  P  A  G  G  S  S  E  T  S  E  C  T  E  T  M  V  P  A  D  E  C  Q  C  V  C  V  L  C  G  E  F  F  E  D  F  Y  N  E  E  S  D  E  W  M  F  K  D  A  V  Y  M  S  I  P  S  E  S  D  C  Q  G  P  I  V  H  K  N  C  I  S  E  S  S  C  Q  E  L  G  F  A  *  D  I  K  L  :  V  L  D  A  *  F  L  S  L  N  R  R  Q  P  G  S  F  *  I  T  C  N  D  Y  T  S  S  C  L  V  S  L  F  H  A  F  V  *  N  D  N  E  M  E  I  L  D  T  R  T  V  C  A  S  Y  L  P  Q  F  D  T  F  C  P  L   </second_frame>
            <third_frame>   M  L  E  R  K  I  L  G  R  *  M  Q  L  W  N  P  G  D  P  *  C  N  R  E  R  L  S  E  L  P  L  P  L  L  S  H  Q  C  I  T  F  L  H  P  H  H  L  *  Q  A  T  V  I  K  *  L  T  V  P  L  S  S  T  R  C  K  P  V  L  V  L  I  Q  D  Y  P  K  S  Q  G  G  Q  I  *  I  L  V  T  S  M  P  R  N  L  *  Q  C  H  L  G  I  P  F  Q  L  I  H  K  D  N  T  L  Q  V  C  R  I  R  L  P  C  L  L  L  I  S  *  D  R  R  F  S  G  K  A  W  N  L  N  I  L  Y  K  P  R  I  Q  Q  F  L  R  F  Q  V  F  L  I  P  L  A  L  A  V  C  W  L  L  F  *  R  V  E  S  L  V  I  N  R  V  L  V  L  R  Q  V  L  L  I  R  V  L  S  H  P  K  P  V  H  S  L  I  P  P  S  F  P  H  L  G  L  G  Y  R  R  P  L  S  L  V  Y  Q  W  T  E  M  L  R  T  L  Q  I  I  P  R  E  M  *  N  S  H  H  C  H  L  V  C  L  Q  L  L  Q  V  L  H  H  R  R  R  R  M  H  Q  I  L  L  P  V  L  F  Q  V  F  *  V  H  W  W  R  R  G  *  Y  P  H  Q  R  R  T  L  L  F  I  L  L  Q  I  H  L  L  K  L  R  T  L  F  H  L  Q  V  P  F  Q  L  L  L  Y  L  L  Q  H  L  H  L  F  L  L  Q  L  I  R  M  N  F  H  T  R  N  L  L  L  K  L  L  R  S  Y  F  S  P  *  K  K  R  Q  K  V  S  L  G  L  Y  L  S  Q  M  *  F  G  I  L  I  L  L  *  S  V  T  L  L  M  M  F  H  F  S  V  E  Y  A  V  L  D  L  N  S  K  *  N  L  I  D  T  W  N  G  T  H  *  E  I  Q  M  S  N  C  *  I  I  Q  E  S  G  I  *  I  L  G  N  G  L  L  H  L  V  A  S  L  V  A  I  N  L  K  G  Q  L  E  V  L  V  R  H  Q  N  V  L  R  P  W  F  L  Q  M  N  V  N  V  C  V  F  C  V  V  S  F  L  K  T  S  T  M  K  K  V  M  N  G  C  S  K  M  L  F  T  *  V  F  Q  V  K  V  I  V  R  V  R  *  S  T  R  T  V  F  Q  K  V  L  V  K  S  W  G  L  P  R  I  *  N  W :   C  W  M  L  D  F  C  L  L  I  E  D  N  Q  V  H  F  E  L  L  V  M  I  I  H  L  L  A  *  *  A  S  S  M  L  L  F  E  T  T  M  K  W  K  F  *  I  L  E  Q  F  A  H  H  I  F  L  N  L  I  L  S  V  H  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09SLm0129J22.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="66894" stop="68468"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1572</number_coding_nucleotides>
                  <number_encoded_amino_acids>524</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HVGTQNIGPMNATLESRGSIVQQGETLRAASPSAQSPMHHLPPSPSLITSNSNQVINSPAEQYQMQTSSRSDPRLSQISRRSNLDPRNQYAQESLTMPSRNTISVNSQRQHPPSLQNSSALSSSHQLRQKVQRESLESEYSVQTKNSTVPEISGFPDPSSTSSLLAAVLKSGVIGNKSSSGTTSSSLDKGALSSQASAQPHPAQFSTSGPRIPPASVTSLSMDRNASNSPNYSQRNVEQPPLPPGLPPTLAGTASSQTPNAPNIASSPLSSILSTLVAKGLISASKKDPPIYTPSDTPPQTQNLIPPASSISTPALSAPTSSSVPSSAHKDELSHSKPSAETPEVLLQSMKEEAKSLIGLVFKPDVIRNSHPAVISDLVDDVPLQCGICGFGFKFQVKLDRHLEWHSLRNPDVKLLNNSRKWYLNSGEWIAAFGGLPCGDKSEGPAGGSSETSECTETMVPADECQCVCVLCGEFFEDFYNEESDEWMFKDAVYMSIPSESDCQGPIVHKNCISESSCQELGFA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="67244" PGL_stop="66893"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="67244" e_stop="66893"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.977"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.977">
            <gDNA_exon_boundary e_start="67244" e_stop="66893" e_length="352"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67244" stop="66893"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277183" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTCTGCAAACTTGGAGGGTGTTGTCTTTGTGAATTAACTGAAATGGTATTCCGAGATGGCATTGTCAGAGATTCCTGGGCATACTGGTTACGAGGATCTAGATTTGACCTCCTTGAGATTTGGGATAGTCTTGGATCAGAACGAGAACTGGTTTGCATCTGGTACTGCTCAGCGGGACTGTTAATTACTTGATTACTGTTGCTTGTTATAAGTGATGGGGATGGAGGAAGGTGATGCATTGGTGACTGAGCAGAGGGAGAGGCAGCTCTGAGAGTCTCTCCCTGTTGCACTATGGATCCCCTGGATTCCAGAGTTGCATTCATCGGCCCAATATTTTGCGTTCCAACATGG</gDNA_template>
            <first_frame> I  L  Q  T  W  R  V  L  S  L  *  I  N  *  N  G  I  P  R  W  H  C  Q  R  F  L  G  I  L  V  T  R  I  *  I  *  P  P  *  D  L  G  *  S  W  I  R  T  R  T  G  L  H  L  V  L  L  S  G  T  V  N  Y  L  I  T  V  A  C  Y  K  *  W  G  W  R  K  V  M  H  W  *  L  S  R  G  R  G  S  S  E  S  L  S  L  L  H  Y  G  S  P  G  F  Q  S  C  I  H  R  P  N  I  L  R  S  N  M  </first_frame>
            <second_frame>  F  C  K  L  G  G  C  C  L  C  E  L  T  E  M  V  F  R  D  G  I  V  R  D  S  W  A  Y  W  L  R  G  S  R  F  D  L  L  E  I  W  D  S  L  G  S  E  R  E  L  V  C  I  W  Y  C  S  A  G  L  L  I  T  *  L  L  L  L  V  I  S  D  G  D  G  G  R  *  C  I  G  D  *  A  E  G  E  A  A  L  R  V  S  P  C  C  T  M  D  P  L  D  S  R  V  A  F  I  G  P  I  F  C  V  P  T  W </second_frame>
            <third_frame>   S  A  N  L  E  G  V  V  F  V  N  *  L  K  W  Y  S  E  M  A  L  S  E  I  P  G  H  T  G  Y  E  D  L  D  L  T  S  L  R  F  G  I  V  L  D  Q  N  E  N  W  F  A  S  G  T  A  Q  R  D  C  *  L  L  D  Y  C  C  L  L  *  V  M  G  M  E  E  G  D  A  L  V  T  E  Q  R  E  R  Q  L  *  E  S  L  P  V  A  L  W  I  P  W  I  P  E  L  H  S  S  A  Q  Y  F  A  F  Q  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09SLm0129J22.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="69371" PGL_stop="69807"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="69371" e_stop="69807"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="69371" e_stop="69807" e_length="437"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69371" stop="69807"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241201" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTGAACAAAAATCATCCAGCTGCAATTCTGTTCAAGATCCAACTTATACTTAAGCAAGCTACTGAGTGTGCATTCACTTTGTTAGAACATTAAGGGCTTAAAACTTTTACTAATTGTCTAGAGCCTCGGCAACTTTGTCCCTTTTAAGTTCTCGGACACTTGGACTATCATTGCAACCATATTGTTGGTTTTAGATAATGGATATTCCCAGATTATGATAGAAGTTCTTTGTTTATTGGGATGTAATTTCATTGCCTGTATGTTTATTGCAAGTCCTTGGTTTTTACTTCTAGTAGAAAGTAGGAGGTTCTTGAAGCTGTCGACTGAATGTTCGTTCACATTAGTTGCTGCTCAAGCTGATGAGAACCTTTACATACACAAACATCTGTGGAATTGTTCATTGTGAATTTTTTTTGTGCTCAACATCACAATCCTC</gDNA_template>
            <first_frame> I  E  Q  K  S  S  S  C  N  S  V  Q  D  P  T  Y  T  *  A  S  Y  *  V  C  I  H  F  V  R  T  L  R  A  *  N  F  Y  *  L  S  R  A  S  A  T  L  S  L  L  S  S  R  T  L  G  L  S  L  Q  P  Y  C  W  F  *  I  M  D  I  P  R  L  *  *  K  F  F  V  Y  W  D  V  I  S  L  P  V  C  L  L  Q  V  L  G  F  Y  F  *  *  K  V  G  G  S  *  S  C  R  L  N  V  R  S  H  *  L  L  L  K  L  M  R  T  F  T  Y  T  N  I  C  G  I  V  H  C  E  F  F  L  C  S  T  S  Q  S   </first_frame>
            <second_frame>  L  N  K  N  H  P  A  A  I  L  F  K  I  Q  L  I  L  K  Q  A  T  E  C  A  F  T  L  L  E  H  *  G  L  K  T  F  T  N  C  L  E  P  R  Q  L  C  P  F  *  V  L  G  H  L  D  Y  H  C  N  H  I  V  G  F  R  *  W  I  F  P  D  Y  D  R  S  S  L  F  I  G  M  *  F  H  C  L  Y  V  Y  C  K  S  L  V  F  T  S  S  R  K  *  E  V  L  E  A  V  D  *  M  F  V  H  I  S  C  C  S  S  *  *  E  P  L  H  T  Q  T  S  V  E  L  F  I  V  N  F  F  C  A  Q  H  H  N  P  </second_frame>
            <third_frame>   *  T  K  I  I  Q  L  Q  F  C  S  R  S  N  L  Y  L  S  K  L  L  S  V  H  S  L  C  *  N  I  K  G  L  K  L  L  L  I  V  *  S  L  G  N  F  V  P  F  K  F  S  D  T  W  T  I  I  A  T  I  L  L  V  L  D  N  G  Y  S  Q  I  M  I  E  V  L  C  L  L  G  C  N  F  I  A  C  M  F  I  A  S  P  W  F  L  L  L  V  E  S  R  R  F  L  K  L  S  T  E  C  S  F  T  L  V  A  A  Q  A  D  E  N  L  Y  I  H  K  H  L  W  N  C  S  L  *  I  F  F  V  L  N  I  T  I  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09SLm0129J22.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69493" stop="69777"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>282</number_coding_nucleotides>
                  <number_encoded_amino_acids>94</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLGNFVPFKFSDTWTIIATILLVLDNGYSQIMIEVLCLLGCNFIACMFIASPWFLLLVESRRFLKLSTECSFTLVAAQADENLYIHKHLWNCSL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="73285" PGL_stop="71977"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="73272" e_stop="73085"/>
            <exon e_start="72976" e_stop="71981"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.985" acc_prob="0.982" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="73272" e_stop="73085" e_length="188"/>
          </exon>
          <intron i_serial="1" don_prob="0.985" acc_prob="0.982">
            <gDNA_intron_boundary i_start="73084" i_stop="72977" i_length="108"/>
          </intron>
          <exon e_serial="2" e_score="0.994">
            <gDNA_exon_boundary e_start="72976" e_stop="71981" e_length="996"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73272" stop="73085"/>
              <exon start="72976" stop="72469"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E389747" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73272" stop="73085"/>
              <exon start="72976" stop="72545"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550301" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73271" stop="73085"/>
              <exon start="72976" stop="72649"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231517" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72974" stop="72259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E389758" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72974" stop="72264"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E389827" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72974" stop="72270"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550170" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72974" stop="72565"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392207" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72974" stop="72571"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550200" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72973" stop="72342"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377743" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72973" stop="72376"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231904" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72973" stop="72394"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235498" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72973" stop="72490"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368043" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72973" stop="72532"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240808" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72807" stop="71981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377742" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72794" stop="72043"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550420" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72784" stop="72056"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E389987" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72723" stop="72030"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E389570" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72694" stop="72071"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550100" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72660" stop="71984"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392454" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72602" stop="72041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E389495" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72495" stop="71981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368042" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72207" stop="71981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215575" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGCAAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAG : AATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGATGTAAGTTCTTTCTCTTATTTTCCACCCTTATATACGGTATATGAGCTTATCCGAATCGATATGATCAGTGAAAATTCATATTATCGATTTGAGATTTCACTTCTTTCAAAAACAAAAAAAAATTAGCTAGTGAGAAGATTTTGTAATTAGTAAAAAAAATTCTTTGTTAATTCTATTTAGCGATAAATTATCAAAATATTTTGTTTGCTATGAATAATAAAGCAATAATTTCAATTTGTTTTTGTGTTTAGGCCTAGTAATTTTTTAGCCTATTGATTTTAGCTAGCTCGTATTTGAATTTTTCTTTTTTATGGAAAAGTAATTTTTTATATATACGATATAATTTTTTTAAAAAAAATATTCAGTTGATCACCTTTCATTTATTTCGGAGTTAAGAGATAAAAAGGGGTTCAATTTAAATATTTTCTTCCAAAAAGTATGGCAAAAATAATTTTTTTTGTACATATATAAATTGTTGAATCGTCTAGATATTACATATAACTTCTAAGAATATATATAGAGTAATAAAATTTTTTTTTGTATTTTCTTTAATACACTTATTATAATTTTTGAGCTCCGATTTTAAAAATTCATATATACGACTCTAACTTCGAATTGATTTTTTTTATTGAAATAGCTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAACGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTAATT</gDNA_template>
            <first_frame> L  F  L  S  L  S  H  P  H  K  D  N  K  K  K  N  F  K  Q  K  K  K  S  I  N  Q  R  Q  K  N  G  A  K  K  Y  F  F  S  S  F  S  Y  G  F  T  T  N  F  L  H  N  N  S  S  F  I  A  N  N  *  F  S  R :   I  *  W  D  Y  *  *  *  S  N  F  L  T  S  T  R  R  F  Q  *  C  K  F  F  L  L  F  S  T  L  I  Y  G  I  *  A  Y  P  N  R  Y  D  Q  *  K  F  I  L  S  I  *  D  F  T  S  F  K  N  K  K  K  L  A  S  E  K  I  L  *  L  V  K  K  I  L  C  *  F  Y  L  A  I  N  Y  Q  N  I  L  F  A  M  N  N  K  A  I  I  S  I  C  F  C  V  *  A  *  *  F  F  S  L  L  I  L  A  S  S  Y  L  N  F  S  F  L  W  K  S  N  F  L  Y  I  R  Y  N  F  F  K  K  N  I  Q  L  I  T  F  H  L  F  R  S  *  E  I  K  R  G  S  I  *  I  F  S  S  K  K  Y  G  K  N  N  F  F  C  T  Y  I  N  C  *  I  V  *  I  L  H  I  T  S  K  N  I  Y  R  V  I  K  F  F  F  V  F  S  L  I  H  L  L  *  F  L  S  S  D  F  K  N  S  Y  I  R  L  *  L  R  I  D  F  F  Y  *  N  S  S  W  E  *  K  N  V  K  K  K  M  K  F  V  S  R  E  E  *  L  Q  R  L  I  *  I  I  F  I  L  N  T  S  Q  N  I  E  Q  V  Y  I  N  I  I  F  F  L  K  D  G  *  L  V  M  F  F  S  I  L  *  I  I  V  Q  R  T  K  R  N  F  N  L  L  K  L  V  F  R  C  I  I  R  L  *  Y  Y  V  L  *  E  L  *  R  *  P  K  V  *   </first_frame>
            <second_frame>  F  F  S  L  S  L  I  L  T  K  T  I  K  R  R  I  L  S  K  K  K  N  Q  *  I  K  G  K  K  M  E  Q  K  N  I  F  F  L  L  S  L  M  V  L  L  L  I  S  Y  T  T  T  A  R  L  L  P  T  I  N  S  Q   : E  S  N  G  I  I  S  N  N  P  I  S  S  Q  V  Q  E  D  F  N  D  V  S  S  F  S  Y  F  P  P  L  Y  T  V  Y  E  L  I  R  I  D  M  I  S  E  N  S  Y  Y  R  F  E  I  S  L  L  S  K  T  K  K  N  *  L  V  R  R  F  C  N  *  *  K  K  F  F  V  N  S  I  *  R  *  I  I  K  I  F  C  L  L  *  I  I  K  Q  *  F  Q  F  V  F  V  F  R  P  S  N  F  L  A  Y  *  F  *  L  A  R  I  *  I  F  L  F  Y  G  K  V  I  F  Y  I  Y  D  I  I  F  L  K  K  I  F  S  *  S  P  F  I  Y  F  G  V  K  R  *  K  G  V  Q  F  K  Y  F  L  P  K  S  M  A  K  I  I  F  F  V  H  I  *  I  V  E  S  S  R  Y  Y  I  *  L  L  R  I  Y  I  E  *  *  N  F  F  L  Y  F  L  *  Y  T  Y  Y  N  F  *  A  P  I  L  K  I  H  I  Y  D  S  N  F  E  L  I  F  F  I  E  I  A  H  G  N  R  R  M  *  R  K  R  *  N  L  F  Q  E  K  N  D  C  R  G  S  F  R  L  Y  L  Y  S  T  Q  A  K  T  L  N  K  F  I  L  I  L  F  F  F  L  R  M  V  N  *  *  C  S  F  L  Y  F  K  L  *  Y  N  V  L  K  E  T  L  I  Y  *  N  L  Y  F  D  V  S  *  D  C  S  T  M  F  C  E  N  Y  K  D  S  Q  K  F  N  </second_frame>
            <third_frame>   F  S  L  S  L  S  S  S  Q  R  Q  *  K  E  E  F  *  A  K  K  K  I  N  K  S  K  A  K  K  W  S  K  K  I  F  F  F  F  F  L  L  W  F  Y  Y  *  F  P  T  Q  Q  Q  L  V  Y  C  Q  Q  L  I  L  K  :  N  L  M  G  L  L  V  I  I  Q  F  P  H  K  Y  K  K  I  S  M  M  *  V  L  S  L  I  F  H  P  Y  I  R  Y  M  S  L  S  E  S  I  *  S  V  K  I  H  I  I  D  L  R  F  H  F  F  Q  K  Q  K  K  I  S  *  *  E  D  F  V  I  S  K  K  N  S  L  L  I  L  F  S  D  K  L  S  K  Y  F  V  C  Y  E  *  *  S  N  N  F  N  L  F  L  C  L  G  L  V  I  F  *  P  I  D  F  S  *  L  V  F  E  F  F  F  F  M  E  K  *  F  F  I  Y  T  I  *  F  F  *  K  K  Y  S  V  D  H  L  S  F  I  S  E  L  R  D  K  K  G  F  N  L  N  I  F  F  Q  K  V  W  Q  K  *  F  F  L  Y  I  Y  K  L  L  N  R  L  D  I  T  Y  N  F  *  E  Y  I  *  S  N  K  I  F  F  C  I  F  F  N  T  L  I  I  I  F  E  L  R  F  *  K  F  I  Y  T  T  L  T  S  N  *  F  F  L  L  K  *  L  M  G  I  E  E  C  E  E  K  D  E  I  C  F  K  R  R  M  T  A  E  A  H  L  D  Y  I  Y  T  Q  H  K  P  K  H  *  T  S  L  Y  *  Y  Y  F  F  S  *  G  W  L  I  S  N  V  L  F  Y  T  L  N  Y  S  T  T  Y  *  K  K  L  *  F  I  K  T  C  I  S  M  Y  H  K  I  V  V  L  C  F  V  R  I  I  K  I  A  K  S  L  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09SLm0129J22.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73199" stop="73085"/>
                    <exon start="72976" stop="72789"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>300</number_coding_nucleotides>
                  <number_encoded_amino_acids>100</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IKGKKMEQKNIFFLLSLMVLLLISYTTTARLLPTINSQESNGIISNNPISSQVQEDFNDVSSFSYFPPLYTVYELIRIDMISENSYYRFEISLLSKTKKN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="73285" e_stop="73085"/>
            <exon e_start="72976" e_stop="72915"/>
            <exon e_start="72277" e_stop="71977"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.985" acc_prob="0.982" e_score="0.995"/>
          <exon-intron don_prob="0.980" acc_prob="0.986" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="73285" e_stop="73085" e_length="201"/>
          </exon>
          <intron i_serial="1" don_prob="0.985" acc_prob="0.982">
            <gDNA_intron_boundary i_start="73084" i_stop="72977" i_length="108"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="72976" e_stop="72915" e_length="62"/>
          </exon>
          <intron i_serial="2" don_prob="0.980" acc_prob="0.986">
            <gDNA_intron_boundary i_start="72914" i_stop="72278" i_length="637"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="72277" e_stop="71977" e_length="301"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73285" stop="73085"/>
              <exon start="72976" stop="72915"/>
              <exon start="72277" stop="71984"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720049" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73272" stop="73085"/>
              <exon start="72976" stop="72915"/>
              <exon start="72277" stop="71981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549931" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73272" stop="73085"/>
              <exon start="72976" stop="72915"/>
              <exon start="72277" stop="71981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E389845" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73272" stop="73085"/>
              <exon start="72976" stop="72915"/>
              <exon start="72277" stop="71984"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549930" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73272" stop="73085"/>
              <exon start="72976" stop="72915"/>
              <exon start="72277" stop="71984"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E389847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73272" stop="73085"/>
              <exon start="72976" stop="72915"/>
              <exon start="72277" stop="72114"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E389589" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73271" stop="73085"/>
              <exon start="72976" stop="72915"/>
              <exon start="72277" stop="71981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376884" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73271" stop="73085"/>
              <exon start="72976" stop="72915"/>
              <exon start="72277" stop="71981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377203" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73271" stop="73085"/>
              <exon start="72976" stop="72915"/>
              <exon start="72277" stop="71984"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230951" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73271" stop="73085"/>
              <exon start="72976" stop="72915"/>
              <exon start="72277" stop="72180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231173" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73270" stop="73085"/>
              <exon start="72976" stop="72915"/>
              <exon start="72277" stop="72116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E389590" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73239" stop="73085"/>
              <exon start="72976" stop="72915"/>
              <exon start="72277" stop="71977"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279598" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72207" stop="71981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215575" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATCTCTCATCTCTCTTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGCAAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAG : AATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGAT : CTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAACGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTAATTATTA</gDNA_template>
            <first_frame> I  S  H  L  S  F  S  L  S  L  S  S  S  Q  R  Q  *  K  E  E  F  *  A  K  K  K  I  N  K  S  K  A  K  K  W  S  K  K  I  F  F  F  F  F  L  L  W  F  Y  Y  *  F  P  T  Q  Q  Q  L  V  Y  C  Q  Q  L  I  L  K  :  N  L  M  G  L  L  V  I  I  Q  F  P  H  K  Y  K  K  I  S  M  I :   S  W  E  *  K  N  V  K  K  K  M  K  F  V  S  R  E  E  *  L  Q  R  L  I  *  I  I  F  I  L  N  T  S  Q  N  I  E  Q  V  Y  I  N  I  I  F  F  L  K  D  G  *  L  V  M  F  F  S  I  L  *  I  I  V  Q  R  T  K  R  N  F  N  L  L  K  L  V  F  R  C  I  I  R  L  *  Y  Y  V  L  *  E  L  *  R  *  P  K  V  *  L  L </first_frame>
            <second_frame>  S  L  I  S  L  F  L  S  L  S  H  P  H  K  D  N  K  K  K  N  F  K  Q  K  K  K  S  I  N  Q  R  Q  K  N  G  A  K  K  Y  F  F  S  S  F  S  Y  G  F  T  T  N  F  L  H  N  N  S  S  F  I  A  N  N  *  F  S  R :   I  *  W  D  Y  *  *  *  S  N  F  L  T  S  T  R  R  F  Q  *   : S  H  G  N  R  R  M  *  R  K  R  *  N  L  F  Q  E  K  N  D  C  R  G  S  F  R  L  Y  L  Y  S  T  Q  A  K  T  L  N  K  F  I  L  I  L  F  F  F  L  R  M  V  N  *  *  C  S  F  L  Y  F  K  L  *  Y  N  V  L  K  E  T  L  I  Y  *  N  L  Y  F  D  V  S  *  D  C  S  T  M  F  C  E  N  Y  K  D  S  Q  K  F  N  Y   </second_frame>
            <third_frame>   L  S  S  L  F  F  S  L  S  L  I  L  T  K  T  I  K  R  R  I  L  S  K  K  K  N  Q  *  I  K  G  K  K  M  E  Q  K  N  I  F  F  L  L  S  L  M  V  L  L  L  I  S  Y  T  T  T  A  R  L  L  P  T  I  N  S  Q   : E  S  N  G  I  I  S  N  N  P  I  S  S  Q  V  Q  E  D  F  N  D  :  L  M  G  I  E  E  C  E  E  K  D  E  I  C  F  K  R  R  M  T  A  E  A  H  L  D  Y  I  Y  T  Q  H  K  P  K  H  *  T  S  L  Y  *  Y  Y  F  F  S  *  G  W  L  I  S  N  V  L  F  Y  T  L  N  Y  S  T  T  Y  *  K  K  L  *  F  I  K  T  C  I  S  M  Y  H  K  I  V  V  L  C  F  V  R  I  I  K  I  A  K  S  L  I  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09SLm0129J22.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73199" stop="73085"/>
                    <exon start="72976" stop="72915"/>
                    <exon start="72277" stop="72167"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>285</number_coding_nucleotides>
                  <number_encoded_amino_acids>95</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IKGKKMEQKNIFFLLSLMVLLLISYTTTARLLPTINSQESNGIISNNPISSQVQEDFNDLMGIEECEEKDEICFKRRMTAEAHLDYIYTQHKPKH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="73273" e_stop="73085"/>
            <exon e_start="72991" e_stop="72915"/>
            <exon e_start="72277" e_stop="71981"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.985" acc_prob="0.000" e_score="0.914"/>
          <exon-intron don_prob="0.980" acc_prob="0.986" e_score="0.857"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.914">
            <gDNA_exon_boundary e_start="73273" e_stop="73085" e_length="189"/>
          </exon>
          <intron i_serial="1" don_prob="0.985" acc_prob="0.000">
            <gDNA_intron_boundary i_start="73084" i_stop="72992" i_length="93"/>
          </intron>
          <exon e_serial="2" e_score="0.857">
            <gDNA_exon_boundary e_start="72991" e_stop="72915" e_length="77"/>
          </exon>
          <intron i_serial="2" don_prob="0.980" acc_prob="0.986">
            <gDNA_intron_boundary i_start="72914" i_stop="72278" i_length="637"/>
          </intron>
          <exon e_serial="3" e_score="0.991">
            <gDNA_exon_boundary e_start="72277" e_stop="71981" e_length="297"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73273" stop="73085"/>
              <exon start="72991" stop="72915"/>
              <exon start="72277" stop="72139"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404431" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73271" stop="73085"/>
              <exon start="72991" stop="72915"/>
              <exon start="72277" stop="72097"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E401857" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72207" stop="71981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215575" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTTTTTCTCTCTCTCTCTCATCCTCACAAAGACAATAAAAAGAAGAATTTTAAGCAAAAAAAAAAATCAATAAATCAAAGGCAAAAAAATGGAGCAAAAAAATATTTTTTTTCTTCTTTCTCTTATGGTTTTACTACTAATTTCCTACACAACAACAGCTCGTTTATTGCCAACAATTAATTCTCAAG : TTATTTTTTTCACAGAATCTAATGGGATTATTAGTAATAATCCAATTTCCTCACAAGTACAAGAAGATTTCAATGAT : CTCATGGGAATAGAAGAATGTGAAGAAAAAGATGAAATTTGTTTCAAGAGAAGAATGACTGCAGAGGCTCATTTAGATTATATTTATACTCAACACAAGCCAAAACATTGAACAAGTTTATATTAATATTATTTTTTTTCTTAAGGATGGTTAATTAGTAATGTTCTTTTCTATACTTTAAATTATAGTACAACGTACTAAAAGAAACTTTAATTTATTAAAACTTGTATTTCGATGTATCATAAGATTGTAGTACTATGTTTTGTGAGAATTATAAAGATAGCCAAAAGTTTAATT</gDNA_template>
            <first_frame> S  F  S  L  S  L  S  S  S  Q  R  Q  *  K  E  E  F  *  A  K  K  K  I  N  K  S  K  A  K  K  W  S  K  K  I  F  F  F  F  F  L  L  W  F  Y  Y  *  F  P  T  Q  Q  Q  L  V  Y  C  Q  Q  L  I  L  K  :  L  F  F  S  Q  N  L  M  G  L  L  V  I  I  Q  F  P  H  K  Y  K  K  I  S  M  I :   S  W  E  *  K  N  V  K  K  K  M  K  F  V  S  R  E  E  *  L  Q  R  L  I  *  I  I  F  I  L  N  T  S  Q  N  I  E  Q  V  Y  I  N  I  I  F  F  L  K  D  G  *  L  V  M  F  F  S  I  L  *  I  I  V  Q  R  T  K  R  N  F  N  L  L  K  L  V  F  R  C  I  I  R  L  *  Y  Y  V  L  *  E  L  *  R  *  P  K  V  *   </first_frame>
            <second_frame>  L  F  L  S  L  S  H  P  H  K  D  N  K  K  K  N  F  K  Q  K  K  K  S  I  N  Q  R  Q  K  N  G  A  K  K  Y  F  F  S  S  F  S  Y  G  F  T  T  N  F  L  H  N  N  S  S  F  I  A  N  N  *  F  S  S :   Y  F  F  H  R  I  *  W  D  Y  *  *  *  S  N  F  L  T  S  T  R  R  F  Q  *   : S  H  G  N  R  R  M  *  R  K  R  *  N  L  F  Q  E  K  N  D  C  R  G  S  F  R  L  Y  L  Y  S  T  Q  A  K  T  L  N  K  F  I  L  I  L  F  F  F  L  R  M  V  N  *  *  C  S  F  L  Y  F  K  L  *  Y  N  V  L  K  E  T  L  I  Y  *  N  L  Y  F  D  V  S  *  D  C  S  T  M  F  C  E  N  Y  K  D  S  Q  K  F  N  </second_frame>
            <third_frame>   F  F  S  L  S  L  I  L  T  K  T  I  K  R  R  I  L  S  K  K  K  N  Q  *  I  K  G  K  K  M  E  Q  K  N  I  F  F  L  L  S  L  M  V  L  L  L  I  S  Y  T  T  T  A  R  L  L  P  T  I  N  S  Q   : V  I  F  F  T  E  S  N  G  I  I  S  N  N  P  I  S  S  Q  V  Q  E  D  F  N  D  :  L  M  G  I  E  E  C  E  E  K  D  E  I  C  F  K  R  R  M  T  A  E  A  H  L  D  Y  I  Y  T  Q  H  K  P  K  H  *  T  S  L  Y  *  Y  Y  F  F  S  *  G  W  L  I  S  N  V  L  F  Y  T  L  N  Y  S  T  T  Y  *  K  K  L  *  F  I  K  T  C  I  S  M  Y  H  K  I  V  V  L  C  F  V  R  I  I  K  I  A  K  S  L  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09SLm0129J22.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73199" stop="73085"/>
                    <exon start="72991" stop="72915"/>
                    <exon start="72277" stop="72167"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>300</number_coding_nucleotides>
                  <number_encoded_amino_acids>100</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IKGKKMEQKNIFFLLSLMVLLLISYTTTARLLPTINSQVIFFTESNGIISNNPISSQVQEDFNDLMGIEECEEKDEICFKRRMTAEAHLDYIYTQHKPKH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 173 chains have been computed
$ 
$ memory statistics:
$ 209360 bytes spliced alignments in total
$ 102 spliced alignments have been stored
$ 2052 bytes was the average size of a spliced alignment
$ 23528 bytes predicted gene locations in total
$ 14 predicted gene locations have been stored
$ 1680 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 197 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-15 05:57:16
-->
