##gff-version 3 # This output was generated with AUGUSTUS (version 2.3). # AUGUSTUS is a gene prediction tool for eukaryotes written by Mario Stanke (mstanke@gwdg.de) # and Oliver Keller (keller@cs.uni-goettingen.de). # Please cite: Mario Stanke, Mark Diekhans, Robert Baertsch, David Haussler (2008), # Using native and syntenically mapped cDNA alignments to improve de novo gene finding # Bioinformatics 24: 637-644, doi 10.1093/bioinformatics/btn013 # No extrinsic information on sequences given. # Initialising the parameters ... # tomato version. Use default transition matrix. # Looks like /tmp/bac-submission-temp-C10HBa0155I21-b5ANO/AUGUSTUS_ab_initio/seq_with_defline_removed is in fasta format. # We have hints for 0 sequences and for 0 of the sequences in the input set. # # ----- prediction on sequence number 1 (length = 134599, name = C10HBa0155I21.2) ----- # # Predicted genes for sequence number 1 on both strands # start gene g1 C10HBa0155I21.2 AUGUSTUS_ab_initio gene 1 745 1 + . ID=g1 C10HBa0155I21.2 AUGUSTUS_ab_initio transcript 1 745 1 + . ID=g1.t1;Parent=g1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 338 414 1 + . Parent=g1.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 1 337 1 + 2 ID=g1.t1.cds;Parent=g1.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 415 745 1 + 1 ID=g1.t1.cds;Parent=g1.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio stop_codon 743 745 . + 0 Parent=g1.t1 # protein sequence = [PFDPNSPPSGGGGYYPSPPTYDTPTTPTTPIIGPDTPSIPDIFTPSTPFDPNSPPSGGYYLSPPTFPTPSTPGIPTFF # PPTTPIINPGIPGTPGIYIPPPLFDPNSPPFSIDYWRTNPALIWALCGWWATIGSAFGVAPAPGLGSNFNLLQALTNTRSDGVGELYREGTASLLNSM # VNKKFPYTTKQVRENFVAALSSNKAAAAQAARFKLANEGRFKRRA] # end gene g1 ### # start gene g2 C10HBa0155I21.2 AUGUSTUS_ab_initio gene 2757 4730 0.26 - . ID=g2 C10HBa0155I21.2 AUGUSTUS_ab_initio transcript 2757 4730 0.26 - . ID=g2.t1;Parent=g2 C10HBa0155I21.2 AUGUSTUS_ab_initio stop_codon 2757 2759 . - 0 Parent=g2.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 2757 4730 0.26 - 0 ID=g2.t1.cds;Parent=g2.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio start_codon 4728 4730 . - 0 Parent=g2.t1 # protein sequence = [MEIEEEAVIVNSSRLKSVVWNDFDRVKKGDTFVAICRHCKRKLSGSSTSGTSHLRNHLIRCRRRSNHDISQLLTRGKK # KEGPLAISNFSFDQEQRNGDAVSVVRTKFEQGHTRDGLFNNGIVNFDNRRSRLDLARMIILHGYPLSMVEHIGFRIFVRNLQPLFDIATFDGVEADCR # EIYLMERQKVYEELDKLPGKISLSADTWTANGDAEYLCLTAHYIDDSWHLKKKILNFLTTDPSQTEDMLSEVIMTSLRNWDIDRKLFSVTFDNYSTYD # KIVSRIREQLCQHRFLYCDGQLFDTRCAANVIKLMVQDTLETASQIIHKVRESIRYVRSSQATQEKFTEMAQIAGVDSRKCLNLDNSFYWNSTYIMVE # TALEYKDAFPLLQEQDSRYAMCPTVTEWDRISAIASFLKLFVEVSNVFAGSKYPTANTYFPDICDIHLQLIEWCQNSDDFVNSLALKLKSRFDEYWKK # CSLALAIAAILDPRFKMQLVKYYYPQIYGDSAPDCINIVSDCMKALYNGHAIYSPLAPNGQAEASQVGGVNNDRLTGFDKFIYETSVSNNIKSDLDNY # LEEKLFPRKDDFNILNWWKVHTPRYPILSMMARNILGMPMSKASLEYVFNTGNKALEPYRSSLRSDTLQALMCAQDWMRDEFEGEYIID] # end gene g2 ### # start gene g3 C10HBa0155I21.2 AUGUSTUS_ab_initio gene 12794 14023 0.55 + . ID=g3 C10HBa0155I21.2 AUGUSTUS_ab_initio transcript 12794 14023 0.55 + . ID=g3.t1;Parent=g3 C10HBa0155I21.2 AUGUSTUS_ab_initio start_codon 12794 12796 . + 0 Parent=g3.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 12794 14023 0.55 + 0 ID=g3.t1.cds;Parent=g3.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio stop_codon 14021 14023 . + 0 Parent=g3.t1 # protein sequence = [MNPHELETLYKIMESISNDQDWRRSYPNPCQQSSSWLGIECKRNTNNTYHVTRLDFGTHPNPTCKKTSTFPSLIFQLP # NLESLFFVQCFTHTKTTISIQENTILQQLSIRSNPSLIGTIPPQISSLKSLQILTLSQNNLLGQIPPQIFTLNSLIHLDLSYNNLTGQIPYQIGNLNN # LIGLDLSYNSLTNPIPSTIGLLKSLQKLDLSSNTLTGRIPQTIEKLQSLNFLALSNNKLSGNFPKGIHKLQALQYFLMDDNPMMFITLPDELSQLHKL # QELSLSSSGYSGEIPSSYSQLMNLTTLSLQNNRLTGKIPVELSRLTHMYHLNLSRNLLDGVVPFNTSFLKRLGRNLDLSGNPGLCLMMNEGVYVGVNV # CSNTITMPLKNRSCEASCGVVTSLLFLVCVFQLLFCV] # end gene g3 ### # start gene g4 C10HBa0155I21.2 AUGUSTUS_ab_initio gene 21161 22287 0.09 - . ID=g4 C10HBa0155I21.2 AUGUSTUS_ab_initio transcript 21161 22287 0.09 - . ID=g4.t1;Parent=g4 C10HBa0155I21.2 AUGUSTUS_ab_initio stop_codon 21161 21163 . - 0 Parent=g4.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 21254 21750 0.55 - . Parent=g4.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 21865 21971 1 - . Parent=g4.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 22022 22250 0.18 - . Parent=g4.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 21161 21253 0.55 - 0 ID=g4.t1.cds;Parent=g4.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 21751 21864 0.8 - 0 ID=g4.t1.cds;Parent=g4.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 21972 22021 0.98 - 2 ID=g4.t1.cds;Parent=g4.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 22251 22287 0.17 - 0 ID=g4.t1.cds;Parent=g4.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio start_codon 22285 22287 . - 0 Parent=g4.t1 # protein sequence = [MLKSDSVPGQDFGEKKNDPLSMYAGDIMTVNVNLAGLPALVLPCGFVDSSSVALPVGVQMISAAFEEEKLLKVGHIFE # QTLQGCSFIPPLVADELGC] # end gene g4 ### # start gene g5 C10HBa0155I21.2 AUGUSTUS_ab_initio gene 31061 31939 0.14 - . ID=g5 C10HBa0155I21.2 AUGUSTUS_ab_initio transcript 31061 31939 0.14 - . ID=g5.t1;Parent=g5 C10HBa0155I21.2 AUGUSTUS_ab_initio stop_codon 31061 31063 . - 0 Parent=g5.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 31061 31939 0.14 - 0 ID=g5.t1.cds;Parent=g5.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio start_codon 31937 31939 . - 0 Parent=g5.t1 # protein sequence = [MADENAANGDVFDDAVEIEGEEDSDAALKTAPLTHKIAALEQENNQLFRENQVIKEKMEKSKHSIEEIQNEKVELQKK # AKKFESDNNALGPVAGRAAELEGEQSRLQHDLITSLNDLEESNSELSKLKLDLEGLKSSDNEKRVKLETVETERNLLLVKLNKLEVSEKDHRAEGEVK # EKEIRGLKNQLEDLKATVKKNEAWRREKEALHSVKNELEKRVIEMMSKVTELEKKLEEKETLITERGVDNNVNGVSAEDKVKAPGGNVDLLMAAASSV # AAVALVGILCFLRFARKS] # end gene g5 ### # start gene g6 C10HBa0155I21.2 AUGUSTUS_ab_initio gene 40921 46586 0.18 + . ID=g6 C10HBa0155I21.2 AUGUSTUS_ab_initio transcript 40921 46586 0.18 + . ID=g6.t1;Parent=g6 C10HBa0155I21.2 AUGUSTUS_ab_initio start_codon 40921 40923 . + 0 Parent=g6.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 41096 41177 1 + . Parent=g6.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 41642 41759 0.66 + . Parent=g6.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 41873 42342 0.41 + . Parent=g6.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 42485 42556 0.92 + . Parent=g6.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 42674 42789 1 + . Parent=g6.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 42942 44080 0.85 + . Parent=g6.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 44173 44303 0.91 + . Parent=g6.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 45235 45360 1 + . Parent=g6.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 45446 45575 0.72 + . Parent=g6.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 45645 46089 0.68 + . Parent=g6.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 46270 46457 0.99 + . Parent=g6.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 40921 41095 0.96 + 0 ID=g6.t1.cds;Parent=g6.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 41178 41641 1 + 2 ID=g6.t1.cds;Parent=g6.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 41760 41872 0.43 + 0 ID=g6.t1.cds;Parent=g6.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 42343 42484 0.5 + 1 ID=g6.t1.cds;Parent=g6.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 42557 42673 1 + 0 ID=g6.t1.cds;Parent=g6.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 42790 42941 0.98 + 0 ID=g6.t1.cds;Parent=g6.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 44081 44172 0.86 + 1 ID=g6.t1.cds;Parent=g6.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 44304 45234 0.91 + 2 ID=g6.t1.cds;Parent=g6.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 45361 45445 1 + 1 ID=g6.t1.cds;Parent=g6.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 45576 45644 0.71 + 0 ID=g6.t1.cds;Parent=g6.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 46090 46269 0.95 + 0 ID=g6.t1.cds;Parent=g6.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 46458 46586 1 + 0 ID=g6.t1.cds;Parent=g6.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio stop_codon 46584 46586 . + 0 Parent=g6.t1 # protein sequence = [MLSMNLHGTFFYVRIAASTKAPYKEKNAWAIPLGSTVYHASTDTSLFSSSLPVLPHAKLNFNESEHYGQSIDDSSPSL # SKLQLEDKIKDPLEEVESSPVGFLLPGDEDELLAGLMDDFDLSGLPSQLEDLEDDFFGSGGLEMEPEDQNNLLNGFATLSMYDGIPGSSSGHYSVPNG # AATVVGEHPYGEHPSRTLFVRNINSNVEDSELKSLFEDYFLLGDFICLNGKVVSVTHRSRARAVEAATNACIRIGTLYTACKHRGFVMISYYDIRAAR # TAMRALQNKPLRRRKLDIHFSIPKENPSEKDINQGTLVVFNLDPSVSNEDLRQIFGVYGEVKEIRETPHKRHHKFIEFYDVRAADAALKALNRSDIAG # KRIKLEPSRPGGARRNLMQQLTQELEHDEIRSFRHSVGSPVASSPPGSWSNFGSPVEPNPLRGYSQSPGLRNLSPVNGNLMPGLASILPGHLSSPKIA # PIGKDPARVGHLNQVTSSPKSSQGMGYQHSFSVPEQKPALSIGSVPFGNSKASGTGTLSGPQFLWGSPPIHSERSDSPIWPASSMARPFASNGQGQGY # LHSRRQSSFLGSHHVGSAPSGNPLDRHFGFFPESPQTSYMNPHAFGSGGSSHNSANQVMNIGSLGAMNMGGALTGNFTESGSPSSRMMPLTRNGPIFF # GNGSYGGAGTVNGEGLIERGRNRKIESGGNQIDNKKQYQLDLEKIMSGGDTRTTLMIKNIPNKYTSKMLLAAIDESHKSTYDFIYLPIDFKNKCNVGY # AFINMVSPAHIVSFYEAFNGKKWEKFNSEKVASLAYARIQGKVALVTHFQNSSLMNEDKRCRPILFQSEGQEAADEETLPSSNLNICIRRPDGSYSGD # SLDSPTSDIDGRPELFTGSS] # end gene g6 ### # start gene g7 C10HBa0155I21.2 AUGUSTUS_ab_initio gene 47563 55558 0.69 - . ID=g7 C10HBa0155I21.2 AUGUSTUS_ab_initio transcript 47563 55558 0.69 - . ID=g7.t1;Parent=g7 C10HBa0155I21.2 AUGUSTUS_ab_initio stop_codon 47563 47565 . - 0 Parent=g7.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 47694 47789 1 - . Parent=g7.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 47890 49708 1 - . Parent=g7.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 49838 49925 0.77 - . Parent=g7.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 49995 50086 0.99 - . Parent=g7.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 50183 50454 0.95 - . Parent=g7.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 50771 51811 0.99 - . Parent=g7.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 51964 55180 0.98 - . Parent=g7.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 47563 47693 1 - 2 ID=g7.t1.cds;Parent=g7.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 47790 47889 1 - 0 ID=g7.t1.cds;Parent=g7.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 49709 49837 0.99 - 0 ID=g7.t1.cds;Parent=g7.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 49926 49994 0.77 - 0 ID=g7.t1.cds;Parent=g7.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 50087 50182 0.98 - 0 ID=g7.t1.cds;Parent=g7.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 50455 50770 0.96 - 1 ID=g7.t1.cds;Parent=g7.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 51812 51963 0.99 - 0 ID=g7.t1.cds;Parent=g7.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 55181 55558 0.96 - 0 ID=g7.t1.cds;Parent=g7.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio start_codon 55556 55558 . - 0 Parent=g7.t1 # protein sequence = [MSNDEATRLVLRTSKFVENILYPVDDQHEIKKQVKHVIIQLSSRNLTGPVIVNNDEFVIHISPSILEGPDYKRDMFLA # FQEGMARIWLWDGQGNAPSSLVNGMVEYITSLASLSERVTSESESVKSSLCYCGVLMENSAMKKMKKQVLLYYCVEMEDVARKIASESDSITLHSINW # RSFADGFPNLFINNAHDIRGQHVAFLASFSSPAVIFEQLSVIFALPRLFVASFTLVLPFFPTGTFERMEEEGDVATAFTMARIISNIPISRGGPTSLV # IYDIHALQERFYFGDNVLPLFETGIPLLKQRLQQLPNSEKIVIAFPDDGAWKRFHKQLVHYPTVICTKVREGDKRIVRLKEGNPAGCHVVIVDDLVQS # GGTLIECQKVLASHGASKVSAYVTHGIFPNRSWERFLHKNDGSEKAFTYFWTTDSCPHTVKAVANKAPFEVISLAGSIADALQI] # end gene g7 ### # start gene g8 C10HBa0155I21.2 AUGUSTUS_ab_initio gene 61479 65065 0.51 + . ID=g8 C10HBa0155I21.2 AUGUSTUS_ab_initio transcript 61479 65065 0.51 + . ID=g8.t1;Parent=g8 C10HBa0155I21.2 AUGUSTUS_ab_initio start_codon 61479 61481 . + 0 Parent=g8.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 62163 63262 0.95 + . Parent=g8.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 63452 63583 0.99 + . Parent=g8.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 63676 63906 0.9 + . Parent=g8.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 63967 64078 0.96 + . Parent=g8.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 64149 64352 0.98 + . Parent=g8.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 64557 64678 0.99 + . Parent=g8.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 61479 62162 0.76 + 0 ID=g8.t1.cds;Parent=g8.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 63263 63451 0.95 + 0 ID=g8.t1.cds;Parent=g8.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 63584 63675 0.91 + 0 ID=g8.t1.cds;Parent=g8.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 63907 63966 0.97 + 1 ID=g8.t1.cds;Parent=g8.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 64079 64148 0.98 + 1 ID=g8.t1.cds;Parent=g8.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 64353 64556 0.98 + 0 ID=g8.t1.cds;Parent=g8.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 64679 65065 0.79 + 0 ID=g8.t1.cds;Parent=g8.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio stop_codon 65063 65065 . + 0 Parent=g8.t1 # protein sequence = [MSSVTHESAKMNNGTKNRENHKQQLSRDVMLGSELWTDGLLCAFEFVRGQRKTNGARATEHYAVRDPKKPPLYKYGAS # NFSPQDVDKDHFIEPHYPTESAYVDIENGDSQSYHQDYPYHSRETSPGNYWIPIGWSRISELLQTVQIDSGWASQPVDLSDEEDDVTVADVAAPYWQN # PVGPTWWCHVAAGHPSINAWLSNAHWLHPAISIALRDESKLISERMKHLLYEVPVRVAGGLLFELLGQSVGDPYVEEDDIPAVIRSWQSQNFLLTALH # VKGCASNINVIGIAEVQELLAAGSCNVPRTIHEVVALLACRLARWDDRLYRKYIFGAADEAELKFMNRRTHEDVQLFSVILNQEIRRLSTQVIRVKWS # LHAREEIVFELLQHLRGNAARNLLEGILKSTRQMIGEQEAVRGRLFTIQDVMQSTVRAWLQDRSLRVQHNLGVFGGCGLVLSIITGLFGINVDGIPGN # EGSPYAFAFFSLALVLLGAGLIAIGLIYLGLNKPFAEEKVEVRKLELQELVKMFQHEAESHVQVRKDDSEAKKSVHSAGIVTDGDKYVVIN] # end gene g8 ### # start gene g9 C10HBa0155I21.2 AUGUSTUS_ab_initio gene 66949 69392 0.39 - . ID=g9 C10HBa0155I21.2 AUGUSTUS_ab_initio transcript 66949 69392 0.39 - . ID=g9.t1;Parent=g9 C10HBa0155I21.2 AUGUSTUS_ab_initio stop_codon 66949 66951 . - 0 Parent=g9.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 67429 67802 1 - . Parent=g9.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 68003 68962 0.57 - . Parent=g9.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 69026 69235 0.67 - . Parent=g9.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 66949 67428 0.76 - 0 ID=g9.t1.cds;Parent=g9.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 67803 68002 1 - 2 ID=g9.t1.cds;Parent=g9.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 68963 69025 0.54 - 2 ID=g9.t1.cds;Parent=g9.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 69236 69392 0.9 - 0 ID=g9.t1.cds;Parent=g9.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio start_codon 69390 69392 . - 0 Parent=g9.t1 # protein sequence = [MILNCAFSGFVQWKIQKKMVNLAASSTNNFNTEKLREQLDHLHKEAQSTRNKVMGLCVNMAFGNNLSSFKIDRANNAR # SRLLRLSEAAERFRRQAAISVRTGKENDARELLFQKKKIMQAMEKSKSRIELLDELAAKLNEAISMREKQLIGNVALDLEIAIDETPSPVRIVSPKDD # IADNSDENEDVDLETIKLADSQELQAPYDGNADLKTNNELKHLGASTSGDMSKEADRINSLKGVSSYEEFLEHIDQQLRDIEVELVTFLRFSSLILEN # KDKLENSKIQQALDVLNGVHQLRGR] # end gene g9 ### # start gene g10 C10HBa0155I21.2 AUGUSTUS_ab_initio gene 72221 79158 0.3 + . ID=g10 C10HBa0155I21.2 AUGUSTUS_ab_initio transcript 72221 79158 0.3 + . ID=g10.t1;Parent=g10 C10HBa0155I21.2 AUGUSTUS_ab_initio start_codon 72221 72223 . + 0 Parent=g10.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 73361 75810 0.31 + . Parent=g10.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 76285 78234 0.97 + . Parent=g10.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 72221 73360 0.97 + 0 ID=g10.t1.cds;Parent=g10.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 75811 76284 0.67 + 0 ID=g10.t1.cds;Parent=g10.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 78235 79158 0.99 + 0 ID=g10.t1.cds;Parent=g10.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio stop_codon 79156 79158 . + 0 Parent=g10.t1 # protein sequence = [MASPAIQRSTHLSSTPVSSSSPLQRLSTFKDRSINPTPTATVTPTPTSGLTPFTPASSPLDSFTSDPIFSSFLSSDFD # STRFSSAALSSGSTASRIEKLQEGLRLLDHQLRHEVLTRHHDLLNQLTSLRAAESALSTLRSSVTSLQSSLRRVRSELSDPHQVIEVKTLQLSNLHSA # TELLQSTIRTIRLSKKLRDLMDSTPDPEKLDLSKAAQLHFEILSLYNEYHLAGIDVVDLELKWVLEIGQKLRAEGMKVLEKGLEGLNQAEVGAGLQVF # YNMGELRGTVDGLVSKYKAMGVKSITTALDMKAISAGGGFGPGGVQRSGTPQFGGSAKAKDALWQRMSGCMDQLHSIVVAVWHLQRVLSKKRDPFTHV # LLLDEVMQEGDPILTDRVWEALGKSFANQMKSTFSTSSFVKEIFTLGYPKLFSMLENLLERISRDTDVKGVPPALSSEAKDQMLSSIEIFQTAFLTLC # LSRLSELVNTVFPVSGRGTVPSKDHIARIISRIQEEIEAVQMDAQLTLLVLREINKVLLLLSERTEYQISAGPEARQITGPATPAQVKNFALCQHLQE # IHTRISSMVAGLPAIATDILSPALGSIYGVAGDSVTPLFQSMLDRLESCILQIHDQNFGSLGMDAAMDNNASPYMEELQKSILHFRSEFLSRLLPSSA # NSLTTGSETICTTLVRSMASRVLIFFIRHASLVRPLSESGKLRLARDMAELELAVGQNLFPVEQLGAPYRALRAFRPVIFLETSQLASSPLRQDLPPS # VILHHLYSRGPEELQSPLQRNRLTPMQYSLWMDSQGEDQIWKGIKATLDDYASKVRSRGDKEFSPVYPLMIEIGSSLSGNR] # end gene g10 ### # start gene g11 C10HBa0155I21.2 AUGUSTUS_ab_initio gene 82545 83558 0.51 - . ID=g11 C10HBa0155I21.2 AUGUSTUS_ab_initio transcript 82545 83558 0.51 - . ID=g11.t1;Parent=g11 C10HBa0155I21.2 AUGUSTUS_ab_initio stop_codon 82545 82547 . - 0 Parent=g11.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 82545 83558 0.51 - 0 ID=g11.t1.cds;Parent=g11.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio start_codon 83556 83558 . - 0 Parent=g11.t1 # protein sequence = [MNRKDANYKRTVMACFVQAVYLLEIDRQENRTEENALAPKWLIPFKYKLVETLNDERDGSIFGAILEWDRSAALSDFM # LIRPSGAPRAVVALRGTLLKSQTMRRDIEDDLRFLAWESLKGSVRFNAALNALKSIATKYGSNNVCIVGHSLGAGFALQVGKALAKEGIHVEAHLFNP # PSVSLAMSLRNIGEKAGVAWKRLKSMLPSNQDTQTSNEGNDTQSFRIGLKPWVPHLYINNSDYICCSYTDQEKNGLRDNHDECDKENATPRNGQQVVA # AAKLFLSSNKGKQKFLEAHGLEQWWSDNLELQMAISNSKLISQQLKSLYTLPASQLTQPKRGQ] # end gene g11 ### # start gene g12 C10HBa0155I21.2 AUGUSTUS_ab_initio gene 88052 92574 0.42 + . ID=g12 C10HBa0155I21.2 AUGUSTUS_ab_initio transcript 88052 92574 0.42 + . ID=g12.t1;Parent=g12 C10HBa0155I21.2 AUGUSTUS_ab_initio start_codon 88052 88054 . + 0 Parent=g12.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 88098 90143 0.5 + . Parent=g12.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 90284 90512 0.89 + . Parent=g12.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 90596 91233 0.96 + . Parent=g12.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 91439 91554 0.97 + . Parent=g12.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 91624 92481 0.92 + . Parent=g12.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 88052 88097 0.51 + 0 ID=g12.t1.cds;Parent=g12.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 90144 90283 0.52 + 2 ID=g12.t1.cds;Parent=g12.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 90513 90595 0.9 + 0 ID=g12.t1.cds;Parent=g12.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 91234 91438 0.98 + 1 ID=g12.t1.cds;Parent=g12.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 91555 91623 0.97 + 0 ID=g12.t1.cds;Parent=g12.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 92482 92574 0.95 + 0 ID=g12.t1.cds;Parent=g12.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio stop_codon 92572 92574 . + 0 Parent=g12.t1 # protein sequence = [MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRG # AAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKENGLIFMEASAKTAQNVEEAFIKTASTIYKKIQDGVF # DVSNESYGIKVGYGGIPGPSGGRDGAASQGGGCCT] # end gene g12 ### # start gene g13 C10HBa0155I21.2 AUGUSTUS_ab_initio gene 94107 95823 0.99 - . ID=g13 C10HBa0155I21.2 AUGUSTUS_ab_initio transcript 94107 95823 0.99 - . ID=g13.t1;Parent=g13 C10HBa0155I21.2 AUGUSTUS_ab_initio stop_codon 94107 94109 . - 0 Parent=g13.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 94723 95284 0.99 - . Parent=g13.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 95347 95679 0.99 - . Parent=g13.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 94107 94722 1 - 1 ID=g13.t1.cds;Parent=g13.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 95285 95346 0.99 - 0 ID=g13.t1.cds;Parent=g13.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 95680 95823 0.99 - 0 ID=g13.t1.cds;Parent=g13.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio start_codon 95821 95823 . - 0 Parent=g13.t1 # protein sequence = [MATQALISSSSISTSAEAARQIIGSRISQSVTRKASFVVRAASTPPVKQGANRQLWFASKQSLSYLDGSLPGDFGFDP # LGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAK # PGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAVLGYFIQALVTGVGPYQNLLDHLADPVNNNVLTSLKFH] # end gene g13 ### # start gene g14 C10HBa0155I21.2 AUGUSTUS_ab_initio gene 97535 100762 0.25 + . ID=g14 C10HBa0155I21.2 AUGUSTUS_ab_initio transcript 97535 100762 0.25 + . ID=g14.t1;Parent=g14 C10HBa0155I21.2 AUGUSTUS_ab_initio start_codon 97535 97537 . + 0 Parent=g14.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 97852 99459 0.79 + . Parent=g14.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 99677 99883 0.42 + . Parent=g14.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 100197 100277 1 + . Parent=g14.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 97535 97851 0.97 + 0 ID=g14.t1.cds;Parent=g14.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 99460 99676 0.88 + 1 ID=g14.t1.cds;Parent=g14.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 99884 100196 0.47 + 0 ID=g14.t1.cds;Parent=g14.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 100278 100762 0.87 + 2 ID=g14.t1.cds;Parent=g14.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio stop_codon 100760 100762 . + 0 Parent=g14.t1 # protein sequence = [MMLRLLKHGRTPAGRLPRRWMSSGSHSKTTVMSFGDGSHGALGLPSSIIGMGSDAYEPTPIPGLPPDVVSVAAGHFHS # LAVTSEGHVWAWGRNNEGQLGRDPLSPRETWNEPKRVEGLHKVRVQTAFASGVISAAIGDDGSLWVWGSSKRGQLGLGKGITNTALPLKIETLSGEDI # VKVSLGWGHALALAKNGNLFGWGYYADGRIGKIGRELEISPLESNSIKPRSRGESSAIEAAEKSVMEAIEKEKDMPIIWEPGSIEELHELKVADVACG # LDHSLVLCRDGMLFSGGSNVYGQLGRAIKDLGMQPVDINFLPLSIASGLGHSLAVCNDRSSEPTGNATSVVSWGWNKSSQLGREGPDNTPQVVEGLIG # ESPVSVSGGRAHSLALTAKKELWAWGCGRNGRLGLGSSADEAEPMLVEYLEGSDVIQAVAGLDHSLVLVSE] # end gene g14 ### # start gene g15 C10HBa0155I21.2 AUGUSTUS_ab_initio gene 101095 102288 0.95 - . ID=g15 C10HBa0155I21.2 AUGUSTUS_ab_initio transcript 101095 102288 0.95 - . ID=g15.t1;Parent=g15 C10HBa0155I21.2 AUGUSTUS_ab_initio stop_codon 101095 101097 . - 0 Parent=g15.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 101158 101240 0.99 - . Parent=g15.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 101363 101540 0.95 - . Parent=g15.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 101578 102024 0.99 - . Parent=g15.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 101095 101157 0.99 - 0 ID=g15.t1.cds;Parent=g15.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 101241 101362 0.95 - 2 ID=g15.t1.cds;Parent=g15.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 101541 101577 0.99 - 0 ID=g15.t1.cds;Parent=g15.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 102025 102288 0.99 - 0 ID=g15.t1.cds;Parent=g15.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio start_codon 102286 102288 . - 0 Parent=g15.t1 # protein sequence = [MALQLQHLSSSTTPKFNTFASQLLPIFQNVVCVSKFKNGGITSLRLSSSSSRIRKKRTTYLCRISASLSPLDLTEDNI # IQVLEDAKAELAQLFDTTVGITGKAELAEVDGPYVKLRLSGKFWHTRSTVVARLGNYLKQRIPEILEVDIEDEKQLDDSPANF] # end gene g15 ### # start gene g16 C10HBa0155I21.2 AUGUSTUS_ab_initio gene 105083 106710 0.19 + . ID=g16 C10HBa0155I21.2 AUGUSTUS_ab_initio transcript 105083 106710 0.19 + . ID=g16.t1;Parent=g16 C10HBa0155I21.2 AUGUSTUS_ab_initio start_codon 105083 105085 . + 0 Parent=g16.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 105178 105507 0.91 + . Parent=g16.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 105626 106437 0.89 + . Parent=g16.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 105083 105177 0.47 + 0 ID=g16.t1.cds;Parent=g16.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 105508 105625 0.89 + 1 ID=g16.t1.cds;Parent=g16.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 106438 106710 0.33 + 0 ID=g16.t1.cds;Parent=g16.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio stop_codon 106708 106710 . + 0 Parent=g16.t1 # protein sequence = [MGLCVVALVIMLKNSQTNDYGSLSYSDLGTFRYLVHANGICAAYSLISAIVAALPRPTTLPRAWTIFLLDQILTYIIL # AAGAASTEVIYLAYKGDTNVTWSETCGSFGGFCKKATASVSITFIVSLCYVGISLLSSYRLFSKYEAPIGQYNNKGGIEITNY] # end gene g16 ### # start gene g17 C10HBa0155I21.2 AUGUSTUS_ab_initio gene 107818 109132 0.19 - . ID=g17 C10HBa0155I21.2 AUGUSTUS_ab_initio transcript 107818 109132 0.19 - . ID=g17.t1;Parent=g17 C10HBa0155I21.2 AUGUSTUS_ab_initio stop_codon 107818 107820 . - 0 Parent=g17.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 107839 108569 0.22 - . Parent=g17.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 108683 108915 0.76 - . Parent=g17.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 109009 109089 0.98 - . Parent=g17.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 107818 107838 0.24 - 0 ID=g17.t1.cds;Parent=g17.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 108570 108682 0.64 - 2 ID=g17.t1.cds;Parent=g17.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 108916 109008 0.97 - 2 ID=g17.t1.cds;Parent=g17.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 109090 109132 0.99 - 0 ID=g17.t1.cds;Parent=g17.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio start_codon 109130 109132 . - 0 Parent=g17.t1 # protein sequence = [MDSQPVEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRNHEVLGSDSTCFVSTCYDLGGQCYPVLKLVGGR # VELVKVMFAKL] # end gene g17 ### # start gene g18 C10HBa0155I21.2 AUGUSTUS_ab_initio gene 121691 122929 0.7 + . ID=g18 C10HBa0155I21.2 AUGUSTUS_ab_initio transcript 121691 122929 0.7 + . ID=g18.t1;Parent=g18 C10HBa0155I21.2 AUGUSTUS_ab_initio start_codon 121691 121693 . + 0 Parent=g18.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 122009 122581 0.72 + . Parent=g18.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 121691 122008 0.72 + 0 ID=g18.t1.cds;Parent=g18.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 122582 122929 0.74 + 0 ID=g18.t1.cds;Parent=g18.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio stop_codon 122927 122929 . + 0 Parent=g18.t1 # protein sequence = [MENDEVILLDFWPSMFGMRVRVALAEKAIEYEYKEEDLFTSKSPLLVKMNPIHKKIPVLIHNGKPVCESFVVVEYIDE # VWKDKAPLLPSHPYDRSQARFWASYTDKLYDFGRRIWTVKREEFAEGKKDFIDPLKLLEEAALGDKPYFGGESFGFVDIALIGFYSWFYTYETICNFS # IEAECPKIAAWGKRCMKRESVSKSLADSRKIYEVVIEFRKKNGLE] # end gene g18 ### # start gene g19 C10HBa0155I21.2 AUGUSTUS_ab_initio gene 123183 124643 0.99 - . ID=g19 C10HBa0155I21.2 AUGUSTUS_ab_initio transcript 123183 124643 0.99 - . ID=g19.t1;Parent=g19 C10HBa0155I21.2 AUGUSTUS_ab_initio stop_codon 123183 123185 . - 0 Parent=g19.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 123183 124643 0.99 - 0 ID=g19.t1.cds;Parent=g19.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio start_codon 124641 124643 . - 0 Parent=g19.t1 # protein sequence = [MVLLKRICDDIEEIEDKKIGLRRGLLTLMLEWKCFEQHLDLTGTRLKEWFNELESREKHMCATQESIGESLKELELVR # ESLNTKRVEVEEKERQISEYIDDLKVREEKEISIRGMLEVFENVLEGRLKEIDVKEKKFYELANELDIKEDRLKQRENEMKAREEELESAMLFNKMQL # DSTSQLSPRGCDSRKRERTMLVESNYPFKRLKPGKSSEYSNAVDASNADQLAMICYDMIVRDDSETEPETDHKGITQVCDCPRAKFHDFDKGKNIEDF # DVDQIWACYDDLDGMPRLYARVEKVFTPKFKLQMVWLEANAEEDHFINHELQISCGRFRLGSSLDVSEHLIFSHQVKCERDGYGYYLIYPTKGETWAV # WSSELLDDHHRQLKYEIVEVLSDFVDDVGISVSYLDKVTGFISIFERRRRGNDSFVIPADALHRFSHKVPSFKLTETINESFELDPASLPDLSDRYND # KFKVGNDVFSFKMDQT] # end gene g19 ### # start gene g20 C10HBa0155I21.2 AUGUSTUS_ab_initio gene 125929 127405 0.31 + . ID=g20 C10HBa0155I21.2 AUGUSTUS_ab_initio transcript 125929 127405 0.31 + . ID=g20.t1;Parent=g20 C10HBa0155I21.2 AUGUSTUS_ab_initio start_codon 125929 125931 . + 0 Parent=g20.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 126244 126825 0.95 + . Parent=g20.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 126950 127036 0.52 + . Parent=g20.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 127167 127332 0.63 + . Parent=g20.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 125929 126243 0.84 + 0 ID=g20.t1.cds;Parent=g20.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 126826 126949 0.56 + 0 ID=g20.t1.cds;Parent=g20.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 127037 127166 0.41 + 2 ID=g20.t1.cds;Parent=g20.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 127333 127405 0.63 + 1 ID=g20.t1.cds;Parent=g20.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio stop_codon 127403 127405 . + 0 Parent=g20.t1 # protein sequence = [MANEEVILLDFWPSMYGMRVRVALAEKCVNFEYKEQNMIEKSPILLEMNPIYKKIPVLIHNGKPICESLNVVQYIDEV # WKNKVIFLPSDPYEKYQAMFWADYVEKVFDTGRKLWMEKGGEKQTRKGNYIDTLRMLEGIIGDKLYFGEVETPKIIAWMKRCMKRESVYKNVVEPLKV # YDFALQLRKHYGIETAFGSVLFSSECYRLDLSVIDLT] # end gene g20 ### # start gene g21 C10HBa0155I21.2 AUGUSTUS_ab_initio gene 128201 134193 0.23 - . ID=g21 C10HBa0155I21.2 AUGUSTUS_ab_initio transcript 128201 134193 0.23 - . ID=g21.t1;Parent=g21 C10HBa0155I21.2 AUGUSTUS_ab_initio stop_codon 128201 128203 . - 0 Parent=g21.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 128326 128743 0.69 - . Parent=g21.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 128805 129335 0.63 - . Parent=g21.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 129536 129764 0.96 - . Parent=g21.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 129878 130891 0.99 - . Parent=g21.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 130927 130996 0.94 - . Parent=g21.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio intron 131105 134181 0.42 - . Parent=g21.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 128201 128325 0.88 - 2 ID=g21.t1.cds;Parent=g21.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 128744 128804 0.69 - 0 ID=g21.t1.cds;Parent=g21.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 129336 129535 0.64 - 2 ID=g21.t1.cds;Parent=g21.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 129765 129877 0.99 - 1 ID=g21.t1.cds;Parent=g21.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 130892 130926 0.95 - 0 ID=g21.t1.cds;Parent=g21.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 130997 131104 0.94 - 0 ID=g21.t1.cds;Parent=g21.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio CDS 134182 134193 0.44 - 0 ID=g21.t1.cds;Parent=g21.t1 C10HBa0155I21.2 AUGUSTUS_ab_initio start_codon 134191 134193 . - 0 Parent=g21.t1 # protein sequence = [MSVAWVLSSKEINFPYPLALTLLHMVFSSVLCFVLTKVLKIMKVEEGMTLDIYISSVIPIGAMFAMTLWLGNTAYLYI # SVSFAQMLKAIMPVAVFILGVAAGLEMMSCRMLLIMSVISFGVLVASYGEININWVGVIYQMGGVVGEALRLIFMEILMCSFAKYSSSTSCFGSFSVP # AIAGVAAYNSHKLKKEATRVSSDESQATSSIPLVSSSTSNA] # end gene g21 ### # command line: # /usr/bin/augustus.real --species=tomato --extrinsicCfgFile=extrinsic.ME.cfg --gff3=on /tmp/bac-submission-temp-C10HBa0155I21-b5ANO/AUGUSTUS_ab_initio/seq_with_defline_removed