##gff-version 3
##sequence-region C10HBa0256L16.1 1 16954
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato_potato	match	6102	6875	0.961	-	0	ID=SGN-E587918_alignment_1;Target=SGN-E587918 1 775 +
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato_potato	match_part	6102	6875	0.961	-	0	ID=GTH_SGN_E_tom_potato_match_part_1;Target=SGN-E587918 1 775 +;Parent=SGN-E587918_alignment_1
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato_potato	match	15392	15751	0.989	+	0	ID=SGN-E201395_alignment_1;Target=SGN-E201395 1 358 +
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato_potato	match_part	15392	15751	0.989	+	0	ID=GTH_SGN_E_tom_potato_match_part_2;Target=SGN-E201395 1 358 +;Parent=SGN-E201395_alignment_1
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato_potato	match	15396	15676	0.950	+	0	ID=SGN-E319586_alignment_1;Target=SGN-E319586 1 279 +
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato_potato	match_part	15396	15676	0.950	+	0	ID=GTH_SGN_E_tom_potato_match_part_3;Target=SGN-E319586 1 279 +;Parent=SGN-E319586_alignment_1
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato_potato	match	15405	15707	0.974	+	0	ID=SGN-E339756_alignment_1;Target=SGN-E339756 1 303 +
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato_potato	match_part	15405	15707	0.974	+	0	ID=GTH_SGN_E_tom_potato_match_part_4;Target=SGN-E339756 1 303 +;Parent=SGN-E339756_alignment_1
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato_potato	match	15409	15620	0.991	+	0	ID=SGN-E262256_alignment_1;Target=SGN-E262256 1 210 +
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato_potato	match_part	15409	15620	0.991	+	0	ID=GTH_SGN_E_tom_potato_match_part_5;Target=SGN-E262256 1 210 +;Parent=SGN-E262256_alignment_1
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato_potato	match	15412	15599	0.989	+	0	ID=SGN-E258694_alignment_1;Target=SGN-E258694 1 186 +
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato_potato	match_part	15412	15599	0.989	+	0	ID=GTH_SGN_E_tom_potato_match_part_6;Target=SGN-E258694 1 186 +;Parent=SGN-E258694_alignment_1
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato_potato	match	15418	15615	0.985	+	0	ID=SGN-E203985_alignment_1;Target=SGN-E203985 1 196 +
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato_potato	match_part	15418	15615	0.985	+	0	ID=GTH_SGN_E_tom_potato_match_part_7;Target=SGN-E203985 1 196 +;Parent=SGN-E203985_alignment_1
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato_potato	match	15498	15661	1.000	+	0	ID=SGN-E286096_alignment_1;Target=SGN-E286096 1 164 +
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato_potato	match_part	15498	15661	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_8;Target=SGN-E286096 1 164 +;Parent=SGN-E286096_alignment_1
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato_potato	gene	6102	6875	.	-	0	ID=GTH_SGN_E_tom_potato_gene_1
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato_potato	mRNA	6102	6875	.	-	0	ID=GTH_SGN_E_tom_potato_gene_1_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_1
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato_potato	exon	6102	6875	0.961	-	0	ID=GTH_SGN_E_tom_potato_exon_1;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato_potato	gene	15392	15751	.	+	0	ID=GTH_SGN_E_tom_potato_gene_2
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato_potato	mRNA	15392	15751	.	+	0	ID=GTH_SGN_E_tom_potato_gene_2_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_2
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato_potato	exon	15392	15751	0.989	+	0	ID=GTH_SGN_E_tom_potato_exon_2;Parent=GTH_SGN_E_tom_potato_gene_2_AGS_1
C10HBa0256L16.1	RepeatMasker	nucleotide_motif	14661	14842	356	+	0	ID=TS2_alignment_1;Target=TS2 73 258 +
C10HBa0256L16.1	Contigs	contig	1	2176	.	.	0	ID=contig1_1;length=2176
C10HBa0256L16.1	Contigs	contig	2277	4298	.	.	0	ID=contig2_1;length=2022
C10HBa0256L16.1	Contigs	contig	4399	7267	.	.	0	ID=contig3_1;length=2869
C10HBa0256L16.1	Contigs	contig	7368	10729	.	.	0	ID=contig4_1;length=3362
C10HBa0256L16.1	Contigs	contig	10830	13137	.	.	0	ID=contig5_1;length=2308
C10HBa0256L16.1	Contigs	contig	13238	16954	.	.	0	ID=contig6_1;length=3717
C10HBa0256L16.1	BLAST_tomato_bac_ends	clone_end	2386	2977	1126	-	0	ID=C10HBa0256L16.1-SL_FOS0212J03_pIBR_563117_1;blast_gaps=0;Target=SL_FOS0212J03_pIBR_563117 3 594 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C10HBa0256L16.1	BLAST_tomato_bac_ends	clone_start	3285	3758	916	-	0	ID=C10HBa0256L16.1-SL_MboI0113D08_T7_196372_1;blast_gaps=0;Target=SL_MboI0113D08_T7_196372 1 474 +;is_problematic=0;blast_percent_identity=99.37;blast_mismatches=3;blast_evalue=0.0
C10HBa0256L16.1	BLAST_tomato_bac_ends	clone_start	3465	4104	1269	+	0	ID=C10HBa0256L16.1-SL_FOS0151G20_pIBF_516158_1;blast_gaps=0;Target=SL_FOS0151G20_pIBF_516158 2 641 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C10HBa0256L16.1	BLAST_tomato_bac_ends	clone_end	3973	4298	595	+	0	ID=C10HBa0256L16.1-SL_FOS0184P12_pIBR_541919_1;blast_gaps=1;Target=SL_FOS0184P12_pIBR_541919 3 327 +;is_problematic=0;blast_percent_identity=99.69;blast_mismatches=0;blast_evalue=3e-167
C10HBa0256L16.1	BLAST_tomato_bac_ends	clone_end	5746	6232	910	+	0	ID=C10HBa0256L16.1-SL_FOS0135D21_pIBR_497680_1;blast_gaps=1;Target=SL_FOS0135D21_pIBR_497680 3 490 +;is_problematic=0;blast_percent_identity=99.80;blast_mismatches=0;blast_evalue=0.0
C10HBa0256L16.1	BLAST_tomato_bac_ends	clone_start	8068	8665	1185	-	0	ID=C10HBa0256L16.1-LE_HBa0144B05_T7_100281_1;blast_gaps=0;Target=LE_HBa0144B05_T7_100281 1 598 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C10HBa0256L16.1	BLAST_tomato_bac_ends	clone_end	8068	8637	1130	-	0	ID=C10HBa0256L16.1-LE_HBa0096L14_SP6_29354_1;blast_gaps=0;Target=LE_HBa0096L14_SP6_29354 1 570 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C10HBa0256L16.1	BLAST_tomato_bac_ends	clone_end	8480	8808	622	-	0	ID=C10HBa0256L16.1-SL_MboI0113D08_SP6_196371_1;blast_gaps=1;Target=SL_MboI0113D08_SP6_196371 1 330 +;is_problematic=0;blast_percent_identity=99.09;blast_mismatches=2;blast_evalue=1e-175
C10HBa0256L16.1	BLAST_tomato_bac_ends	clone_start	10830	11216	728	-	0	ID=C10HBa0256L16.1-LE_HBa0003C08_T7_53487_1;blast_gaps=1;Target=LE_HBa0003C08_T7_53487 226 611 +;is_problematic=0;blast_percent_identity=98.97;blast_mismatches=3;blast_evalue=0.0
C10HBa0256L16.1	BLAST_tomato_bac_ends	clone_end	14624	14841	416	-	0	ID=C10HBa0256L16.1-LE_HBa0144B05_SP6_100280_1;blast_gaps=1;Target=LE_HBa0144B05_SP6_100280 1 217 +;is_problematic=0;blast_percent_identity=99.54;blast_mismatches=0;blast_evalue=1e-113
C10HBa0256L16.1	BLAST_tomato_bac_ends	clone_end	15744	16360	1193	-	0	ID=C10HBa0256L16.1-SL_MboI0135C02_SP6_381782_1;blast_gaps=1;Target=SL_MboI0135C02_SP6_381782 1 618 +;is_problematic=0;blast_percent_identity=99.51;blast_mismatches=2;blast_evalue=0.0
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato	match	15392	15751	0.989	+	0	ID=SGN-E201395_alignment_2;Target=SGN-E201395 1 358 +
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato	match_part	15392	15751	0.989	+	0	ID=GTH_SGN_E_tom_match_part_1;Target=SGN-E201395 1 358 +;Parent=SGN-E201395_alignment_2
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato	match	15396	15676	0.950	+	0	ID=SGN-E319586_alignment_2;Target=SGN-E319586 1 279 +
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato	match_part	15396	15676	0.950	+	0	ID=GTH_SGN_E_tom_match_part_2;Target=SGN-E319586 1 279 +;Parent=SGN-E319586_alignment_2
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato	match	15405	15707	0.974	+	0	ID=SGN-E339756_alignment_2;Target=SGN-E339756 1 303 +
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato	match_part	15405	15707	0.974	+	0	ID=GTH_SGN_E_tom_match_part_3;Target=SGN-E339756 1 303 +;Parent=SGN-E339756_alignment_2
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato	match	15409	15620	0.991	+	0	ID=SGN-E262256_alignment_2;Target=SGN-E262256 1 210 +
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato	match_part	15409	15620	0.991	+	0	ID=GTH_SGN_E_tom_match_part_4;Target=SGN-E262256 1 210 +;Parent=SGN-E262256_alignment_2
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato	match	15412	15599	0.989	+	0	ID=SGN-E258694_alignment_2;Target=SGN-E258694 1 186 +
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato	match_part	15412	15599	0.989	+	0	ID=GTH_SGN_E_tom_match_part_5;Target=SGN-E258694 1 186 +;Parent=SGN-E258694_alignment_2
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato	match	15418	15615	0.985	+	0	ID=SGN-E203985_alignment_2;Target=SGN-E203985 1 196 +
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato	match_part	15418	15615	0.985	+	0	ID=GTH_SGN_E_tom_match_part_6;Target=SGN-E203985 1 196 +;Parent=SGN-E203985_alignment_2
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato	match	15498	15661	1.000	+	0	ID=SGN-E286096_alignment_2;Target=SGN-E286096 1 164 +
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato	match_part	15498	15661	1.000	+	0	ID=GTH_SGN_E_tom_match_part_7;Target=SGN-E286096 1 164 +;Parent=SGN-E286096_alignment_2
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato	gene	15392	15751	.	+	0	ID=GTH_SGN_E_tom_gene_1
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato	mRNA	15392	15751	.	+	0	ID=GTH_SGN_E_tom_gene_1_AGS_1;Parent=GTH_SGN_E_tom_gene_1
C10HBa0256L16.1	GenomeThreader_SGN_E_tomato	exon	15392	15751	0.989	+	0	ID=GTH_SGN_E_tom_exon_1;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	gene	1513	3849	0.89	+	.	ID=g1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	transcript	1513	3849	0.89	+	.	ID=g1.t1_1;Parent=g1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	start_codon	1513	1515	.	+	0	Parent=g1.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	intron	1739	2757	0.89	+	.	Parent=g1.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	intron	2816	3351	0.92	+	.	Parent=g1.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	intron	3422	3786	1	+	.	Parent=g1.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	CDS	1513	1738	1	+	0	ID=g1.t1.cds_1;Parent=g1.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	CDS	2758	2815	0.89	+	2	ID=g1.t1.cds_2;Parent=g1.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	CDS	3352	3421	1	+	1	ID=g1.t1.cds_3;Parent=g1.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	CDS	3787	3849	1	+	0	ID=g1.t1.cds_4;Parent=g1.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	stop_codon	3847	3849	.	+	0	Parent=g1.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	gene	4206	11000	0.13	-	.	ID=g2_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	transcript	4206	11000	0.13	-	.	ID=g2.t1_1;Parent=g2_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	stop_codon	4206	4208	.	-	0	Parent=g2.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	intron	4229	4596	0.15	-	.	Parent=g2.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	intron	4745	5509	0.99	-	.	Parent=g2.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	intron	5720	5908	0.99	-	.	Parent=g2.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	intron	7039	7109	1	-	.	Parent=g2.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	intron	7252	10844	0.79	-	.	Parent=g2.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	CDS	4206	4228	0.28	-	2	ID=g2.t1.cds_1;Parent=g2.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	CDS	4597	4744	0.55	-	0	ID=g2.t1.cds_2;Parent=g2.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	CDS	5510	5719	0.98	-	0	ID=g2.t1.cds_3;Parent=g2.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	CDS	5909	7038	0.98	-	2	ID=g2.t1.cds_4;Parent=g2.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	CDS	7110	7251	0.79	-	0	ID=g2.t1.cds_5;Parent=g2.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	CDS	10845	11000	0.66	-	0	ID=g2.t1.cds_6;Parent=g2.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	start_codon	10998	11000	.	-	0	Parent=g2.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	gene	11137	11979	0.87	-	.	ID=g3_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	transcript	11137	11979	0.87	-	.	ID=g3.t1_1;Parent=g3_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	stop_codon	11137	11139	.	-	0	Parent=g3.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	CDS	11137	11979	0.87	-	0	ID=g3.t1.cds_1;Parent=g3.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	start_codon	11977	11979	.	-	0	Parent=g3.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	gene	12040	13042	0.74	-	.	ID=g4_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	transcript	12040	13042	0.74	-	.	ID=g4.t1_1;Parent=g4_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	stop_codon	12040	12042	.	-	0	Parent=g4.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	intron	12793	13009	0.78	-	.	Parent=g4.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	CDS	12040	12792	0.78	-	0	ID=g4.t1.cds_1;Parent=g4.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	CDS	13010	13042	0.92	-	0	ID=g4.t1.cds_2;Parent=g4.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_cdna	start_codon	13040	13042	.	-	0	Parent=g4.t1_1
C10HBa0256L16.1	AUGUSTUS_ab_initio	gene	2624	11000	0.13	-	.	ID=g1_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	transcript	2624	11000	0.13	-	.	ID=g1.t1_2;Parent=g1_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	stop_codon	2624	2626	.	-	0	Parent=g1.t1_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	intron	2770	4596	0.43	-	.	Parent=g1.t1_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	intron	4745	5509	0.99	-	.	Parent=g1.t1_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	intron	5720	5908	0.99	-	.	Parent=g1.t1_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	intron	7039	7109	1	-	.	Parent=g1.t1_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	intron	7252	10844	0.99	-	.	Parent=g1.t1_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	CDS	2624	2769	0.6	-	2	ID=g1.t1.cds_5;Parent=g1.t1_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	CDS	4597	4744	0.68	-	0	ID=g1.t1.cds_6;Parent=g1.t1_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	CDS	5510	5719	0.99	-	0	ID=g1.t1.cds_7;Parent=g1.t1_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	CDS	5909	7038	0.98	-	2	ID=g1.t1.cds_8;Parent=g1.t1_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	CDS	7110	7251	0.99	-	0	ID=g1.t1.cds_9;Parent=g1.t1_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	CDS	10845	11000	0.31	-	0	ID=g1.t1.cds_10;Parent=g1.t1_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	start_codon	10998	11000	.	-	0	Parent=g1.t1_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	gene	11137	11979	0.32	-	.	ID=g2_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	transcript	11137	11979	0.32	-	.	ID=g2.t1_2;Parent=g2_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	stop_codon	11137	11139	.	-	0	Parent=g2.t1_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	CDS	11137	11979	0.32	-	0	ID=g2.t1.cds_7;Parent=g2.t1_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	start_codon	11977	11979	.	-	0	Parent=g2.t1_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	gene	12040	13042	0.75	-	.	ID=g3_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	transcript	12040	13042	0.75	-	.	ID=g3.t1_2;Parent=g3_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	stop_codon	12040	12042	.	-	0	Parent=g3.t1_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	intron	12793	13009	0.8	-	.	Parent=g3.t1_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	CDS	12040	12792	0.81	-	0	ID=g3.t1.cds_2;Parent=g3.t1_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	CDS	13010	13042	0.94	-	0	ID=g3.t1.cds_3;Parent=g3.t1_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	start_codon	13040	13042	.	-	0	Parent=g3.t1_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	gene	15545	16164	0.75	+	.	ID=g4_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	transcript	15545	16164	0.75	+	.	ID=g4.t1_2;Parent=g4_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	start_codon	15545	15547	.	+	0	Parent=g4.t1_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	intron	15778	16103	0.75	+	.	Parent=g4.t1_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	CDS	15545	15777	0.99	+	0	ID=g4.t1.cds_3;Parent=g4.t1_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	CDS	16104	16164	0.78	+	1	ID=g4.t1.cds_4;Parent=g4.t1_2
C10HBa0256L16.1	AUGUSTUS_ab_initio	stop_codon	16162	16164	.	+	0	Parent=g4.t1_2
C10HBa0256L16.1	AUGUSTUS_tom_ugs	gene	1513	3849	0.81	+	.	ID=g1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	transcript	1513	3849	0.81	+	.	ID=g1.t1_3;Parent=g1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	start_codon	1513	1515	.	+	0	Parent=g1.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	intron	1739	2757	0.81	+	.	Parent=g1.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	intron	2816	3351	0.88	+	.	Parent=g1.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	intron	3422	3786	1	+	.	Parent=g1.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	CDS	1513	1738	0.99	+	0	ID=g1.t1.cds_11;Parent=g1.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	CDS	2758	2815	0.81	+	2	ID=g1.t1.cds_12;Parent=g1.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	CDS	3352	3421	1	+	1	ID=g1.t1.cds_13;Parent=g1.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	CDS	3787	3849	1	+	0	ID=g1.t1.cds_14;Parent=g1.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	stop_codon	3847	3849	.	+	0	Parent=g1.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	gene	4206	11000	0.16	-	.	ID=g2_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	transcript	4206	11000	0.16	-	.	ID=g2.t1_3;Parent=g2_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	stop_codon	4206	4208	.	-	0	Parent=g2.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	intron	4229	4596	0.19	-	.	Parent=g2.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	intron	4745	5509	1	-	.	Parent=g2.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	intron	5720	5908	1	-	.	Parent=g2.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	intron	7039	7109	0.98	-	.	Parent=g2.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	intron	7252	10844	0.77	-	.	Parent=g2.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	CDS	4206	4228	0.24	-	2	ID=g2.t1.cds_8;Parent=g2.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	CDS	4597	4744	0.59	-	0	ID=g2.t1.cds_9;Parent=g2.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	CDS	5510	5719	1	-	0	ID=g2.t1.cds_10;Parent=g2.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	CDS	5909	7038	1	-	2	ID=g2.t1.cds_11;Parent=g2.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	CDS	7110	7251	0.77	-	0	ID=g2.t1.cds_12;Parent=g2.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	CDS	10845	11000	0.69	-	0	ID=g2.t1.cds_13;Parent=g2.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	start_codon	10998	11000	.	-	0	Parent=g2.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	gene	11137	11979	0.91	-	.	ID=g3_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	transcript	11137	11979	0.91	-	.	ID=g3.t1_3;Parent=g3_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	stop_codon	11137	11139	.	-	0	Parent=g3.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	CDS	11137	11979	0.91	-	0	ID=g3.t1.cds_4;Parent=g3.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	start_codon	11977	11979	.	-	0	Parent=g3.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	gene	12040	13042	0.78	-	.	ID=g4_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	transcript	12040	13042	0.78	-	.	ID=g4.t1_3;Parent=g4_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	stop_codon	12040	12042	.	-	0	Parent=g4.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	intron	12793	13009	0.82	-	.	Parent=g4.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	CDS	12040	12792	0.82	-	0	ID=g4.t1.cds_5;Parent=g4.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	CDS	13010	13042	0.95	-	0	ID=g4.t1.cds_6;Parent=g4.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	start_codon	13040	13042	.	-	0	Parent=g4.t1_3
C10HBa0256L16.1	AUGUSTUS_tom_ugs	gene	15545	16164	0.62	+	.	ID=g5_1
C10HBa0256L16.1	AUGUSTUS_tom_ugs	transcript	15545	16164	0.62	+	.	ID=g5.t1_1;Parent=g5_1
C10HBa0256L16.1	AUGUSTUS_tom_ugs	start_codon	15545	15547	.	+	0	Parent=g5.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_ugs	intron	15778	16103	0.62	+	.	Parent=g5.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_ugs	CDS	15545	15777	0.81	+	0	ID=g5.t1.cds_1;Parent=g5.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_ugs	CDS	16104	16164	0.62	+	1	ID=g5.t1.cds_2;Parent=g5.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_ugs	stop_codon	16162	16164	.	+	0	Parent=g5.t1_1
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	gene	1513	3849	0.84	+	.	ID=g1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	transcript	1513	3849	0.84	+	.	ID=g1.t1_4;Parent=g1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	start_codon	1513	1515	.	+	0	Parent=g1.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	intron	1739	2757	0.84	+	.	Parent=g1.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	intron	2816	3351	0.87	+	.	Parent=g1.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	intron	3422	3786	1	+	.	Parent=g1.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	CDS	1513	1738	0.99	+	0	ID=g1.t1.cds_15;Parent=g1.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	CDS	2758	2815	0.84	+	2	ID=g1.t1.cds_16;Parent=g1.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	CDS	3352	3421	1	+	1	ID=g1.t1.cds_17;Parent=g1.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	CDS	3787	3849	1	+	0	ID=g1.t1.cds_18;Parent=g1.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	stop_codon	3847	3849	.	+	0	Parent=g1.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	gene	4206	11000	0.18	-	.	ID=g2_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	transcript	4206	11000	0.18	-	.	ID=g2.t1_4;Parent=g2_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	stop_codon	4206	4208	.	-	0	Parent=g2.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	intron	4229	4596	0.18	-	.	Parent=g2.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	intron	4745	5509	0.92	-	.	Parent=g2.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	intron	5720	5908	0.97	-	.	Parent=g2.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	intron	7039	7109	1	-	.	Parent=g2.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	intron	7252	10844	0.99	-	.	Parent=g2.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	CDS	4206	4228	0.25	-	2	ID=g2.t1.cds_14;Parent=g2.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	CDS	4597	4744	0.54	-	0	ID=g2.t1.cds_15;Parent=g2.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	CDS	5510	5719	0.9	-	0	ID=g2.t1.cds_16;Parent=g2.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	CDS	5909	7038	0.97	-	2	ID=g2.t1.cds_17;Parent=g2.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	CDS	7110	7251	0.99	-	0	ID=g2.t1.cds_18;Parent=g2.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	CDS	10845	11000	0.99	-	0	ID=g2.t1.cds_19;Parent=g2.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	start_codon	10998	11000	.	-	0	Parent=g2.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	gene	11137	11979	1	-	.	ID=g3_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	transcript	11137	11979	1	-	.	ID=g3.t1_4;Parent=g3_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	stop_codon	11137	11139	.	-	0	Parent=g3.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	CDS	11137	11979	1	-	0	ID=g3.t1.cds_5;Parent=g3.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	start_codon	11977	11979	.	-	0	Parent=g3.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	gene	12040	13042	0.78	-	.	ID=g4_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	transcript	12040	13042	0.78	-	.	ID=g4.t1_4;Parent=g4_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	stop_codon	12040	12042	.	-	0	Parent=g4.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	intron	12793	13009	0.83	-	.	Parent=g4.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	CDS	12040	12792	0.83	-	0	ID=g4.t1.cds_7;Parent=g4.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	CDS	13010	13042	0.92	-	0	ID=g4.t1.cds_8;Parent=g4.t1_4
C10HBa0256L16.1	AUGUSTUS_tom_pot_cdna	start_codon	13040	13042	.	-	0	Parent=g4.t1_4
C10HBa0256L16.1	BLAST_ath_pep	match	7108	7260	53.5	-	0	ID=AT1G63210.1_fwd_alignment_1;blast_gaps=1;Target=AT1G63210.1 588 639 +;blast_match_length=-152;blast_percent_identity=50.00;blast_mismatches=25;blast_evalue=4e-161
C10HBa0256L16.1	BLAST_ath_pep	match	5504	7039	538	-	0	ID=AT1G63210.1_fwd_alignment_2;blast_gaps=5;Target=AT1G63210.1 639 1094 +;blast_match_length=-1535;blast_percent_identity=55.86;blast_mismatches=226;blast_evalue=4e-161
C10HBa0256L16.1	BLAST_ath_pep	match	4433	4747	177	-	0	ID=AT1G63210.1_fwd_alignment_3;blast_gaps=0;Target=AT1G63210.1 1092 1196 +;blast_match_length=-314;blast_percent_identity=72.38;blast_mismatches=29;blast_evalue=3e-43
C10HBa0256L16.1	BLAST_ath_pep	match	5474	7039	616	-	0	ID=AT1G65440.1_fwd_alignment_1;blast_gaps=2;Target=AT1G65440.1 848 1320 +;blast_match_length=-1565;blast_percent_identity=63.79;blast_mismatches=189;blast_evalue=0.0
C10HBa0256L16.1	BLAST_ath_pep	match	7105	7260	81.3	-	0	ID=AT1G65440.1_fwd_alignment_2;blast_gaps=0;Target=AT1G65440.1 798 849 +;blast_match_length=-155;blast_percent_identity=69.23;blast_mismatches=16;blast_evalue=0.0
C10HBa0256L16.1	BLAST_ath_pep	match	4400	4747	206	-	0	ID=AT1G65440.1_fwd_alignment_3;blast_gaps=1;Target=AT1G65440.1 1308 1424 +;blast_match_length=-347;blast_percent_identity=82.05;blast_mismatches=20;blast_evalue=5e-52
C10HBa0256L16.1	BLAST_ath_pep	match	5474	7039	616	-	0	ID=AT1G65440.2_fwd_alignment_1;blast_gaps=2;Target=AT1G65440.2 848 1320 +;blast_match_length=-1565;blast_percent_identity=63.79;blast_mismatches=189;blast_evalue=0.0
C10HBa0256L16.1	BLAST_ath_pep	match	7105	7260	81.3	-	0	ID=AT1G65440.2_fwd_alignment_2;blast_gaps=0;Target=AT1G65440.2 798 849 +;blast_match_length=-155;blast_percent_identity=69.23;blast_mismatches=16;blast_evalue=0.0
C10HBa0256L16.1	BLAST_ath_pep	match	4400	4747	206	-	0	ID=AT1G65440.2_fwd_alignment_3;blast_gaps=1;Target=AT1G65440.2 1308 1424 +;blast_match_length=-347;blast_percent_identity=82.05;blast_mismatches=20;blast_evalue=5e-52