psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 991 9 0 0 0 0 5 2484 + SGN-E745011 1000 0 1000 C11HBa0034I10.2 87341 15327 18811 6 65,221,87,147,93,387, 0,65,286,373,520,613, 15327,15393,17337,17554,18241,18424, 614 3 0 0 0 0 2 1418 + SGN-E689044 617 0 617 C11HBa0034I10.2 87341 37723 39758 3 275,61,281, 0,275,336, 37723,38166,39477, 276 12 0 0 3 4 5 42 + SGN-E204223 580 288 580 C11HBa0034I10.2 87341 61056 61386 7 22,15,7,125,45,49,25, 288,310,326,333,459,504,555, 61056,61087,61125,61138,61265,61312,61361, 38 1 0 0 0 0 0 0 + SGN-E204092 457 414 453 C11HBa0034I10.2 87341 61060 61099 1 39, 414, 61060, 59 3 0 0 0 0 1 3 + SGN-E577899 392 0 62 C11HBa0034I10.2 87341 61131 61196 2 57,5, 0,57, 61131,61191, 98 4 0 0 0 0 0 0 - SGN-E577960 387 285 387 C11HBa0034I10.2 87341 61361 61463 1 102, 0, 61361, 238 15 0 0 1 1 1 2 + SGN-E578392 506 252 506 C11HBa0034I10.2 87341 61056 61311 2 207,46, 252,460, 61056,61265, 54 2 0 0 1 7 1 5 - SGN-E367819 642 510 573 C11HBa0034I10.2 87341 65294 65355 2 7,49, 69,83, 65294,65306, 160 11 0 0 1 12 1 11 + SGN-E370508 183 0 183 C11HBa0034I10.2 87341 15389 15571 2 109,62, 0,121, 15389,15509, 251 12 0 0 2 2 5 42 + SGN-E374844 554 288 553 C11HBa0034I10.2 87341 61056 61361 6 22,15,7,125,45,49, 288,310,326,333,459,504, 61056,61087,61125,61138,61265,61312, 113 7 0 0 1 1 1 1 - SGN-E376754 662 534 655 C11HBa0034I10.2 87341 61342 61463 3 18,57,45, 7,25,83, 61342,61361,61418, 246 12 0 0 3 10 2 4 + SGN-E377238 484 0 268 C11HBa0034I10.2 87341 61207 61469 5 56,45,49,102,6, 0,57,102,153,262, 61207,61265,61312,61361,61463, 85 5 0 0 0 0 1 21 - SGN-E377316 765 673 763 C11HBa0034I10.2 87341 61352 61463 2 60,30, 2,62, 61352,61433, 67 5 0 0 0 0 0 0 + SGN-E391901 346 266 338 C11HBa0034I10.2 87341 61061 61133 1 72, 266, 61061, 42 0 0 0 0 0 1 209 + SGN-E394807 217 175 217 C11HBa0034I10.2 87341 61060 61311 2 31,11, 175,206, 61060,61300, 39 0 0 0 0 0 0 0 + SGN-E398336 459 416 455 C11HBa0034I10.2 87341 61060 61099 1 39, 416, 61060, 750 2 0 0 1 1 3 1356 - SGN-E541487 753 0 753 C11HBa0034I10.2 87341 39610 41718 5 6,149,4,147,446, 0,6,156,160,307, 39610,39617,39766,40168,41272, 85 4 0 0 0 0 0 0 - SGN-E546063 812 695 784 C11HBa0034I10.2 87341 61121 61210 1 89, 28, 61121, 46 0 0 0 0 0 0 0 + SGN-E547334 453 376 422 C11HBa0034I10.2 87341 61056 61102 1 46, 376, 61056, 46 0 0 0 0 0 0 0 + SGN-E547335 453 376 422 C11HBa0034I10.2 87341 61056 61102 1 46, 376, 61056, 543 0 0 0 0 0 2 1418 + SGN-E551214 547 4 547 C11HBa0034I10.2 87341 37722 39683 3 276,61,206, 4,280,341, 37722,38166,39477, 246 12 0 0 3 10 2 4 + SGN-E233594 310 0 268 C11HBa0034I10.2 87341 61207 61469 5 56,45,49,102,6, 0,57,102,153,262, 61207,61265,61312,61361,61463, 246 12 0 0 3 10 2 4 + SGN-E233735 514 0 268 C11HBa0034I10.2 87341 61207 61469 5 56,45,49,102,6, 0,57,102,153,262, 61207,61265,61312,61361,61463, 230 9 0 0 3 10 2 4 + SGN-E237992 666 18 267 C11HBa0034I10.2 87341 61226 61469 5 37,45,49,102,6, 18,56,101,152,261, 61226,61265,61312,61361,61463, 91 6 0 0 0 0 0 0 - SGN-E240526 430 333 430 C11HBa0034I10.2 87341 61373 61470 1 97, 0, 61373, 478 6 0 0 3 3 2 1852 + SGN-E238180 487 0 487 C11HBa0034I10.2 87341 15332 17668 6 60,222,9,79,82,32, 0,61,283,293,372,455, 15332,15392,17336,17345,17554,17636, 246 12 0 0 3 10 2 4 + SGN-E240879 434 0 268 C11HBa0034I10.2 87341 61207 61469 5 56,45,49,102,6, 0,57,102,153,262, 61207,61265,61312,61361,61463, 488 1 0 0 1 1 2 1853 + SGN-E239772 490 0 490 C11HBa0034I10.2 87341 15315 17657 4 77,222,87,103, 0,78,300,387, 15315,15392,17337,17554, 246 12 0 0 3 10 2 4 + SGN-E242674 528 0 268 C11HBa0034I10.2 87341 61207 61469 5 56,45,49,102,6, 0,57,102,153,262, 61207,61265,61312,61361,61463, 246 12 0 0 3 10 2 4 + SGN-E233074 643 0 268 C11HBa0034I10.2 87341 61207 61469 5 56,45,49,102,6, 0,57,102,153,262, 61207,61265,61312,61361,61463, 35 2 0 0 0 0 1 3 + SGN-E717595 625 518 555 C11HBa0034I10.2 87341 15365 15405 2 8,29, 518,526, 15365,15376, 43 0 0 0 0 0 0 0 + SGN-E719799 683 556 599 C11HBa0034I10.2 87341 61060 61103 1 43, 556, 61060, 39 0 0 0 0 0 0 0 + SGN-E721929 648 556 595 C11HBa0034I10.2 87341 61060 61099 1 39, 556, 61060, 39 2 0 0 0 0 2 7 + SGN-E722141 712 549 590 C11HBa0034I10.2 87341 15357 15405 3 6,6,29, 549,555,561, 15357,15368,15376, 598 6 0 0 0 0 2 1418 + SGN-E724039 604 0 604 C11HBa0034I10.2 87341 37715 39737 3 283,61,260, 0,283,344, 37715,38166,39477, 37 3 0 0 0 0 0 0 + SGN-E733435 467 354 394 C11HBa0034I10.2 87341 15365 15405 1 40, 354, 15365, 667 1 0 0 0 0 2 1355 + SGN-E738906 680 0 668 C11HBa0034I10.2 87341 39705 41728 3 65,147,456, 0,65,212, 39705,40168,41272, 668 0 0 0 0 0 2 1355 + SGN-E740726 680 0 668 C11HBa0034I10.2 87341 39705 41728 3 65,147,456, 0,65,212, 39705,40168,41272, 668 0 0 0 0 0 2 1355 + SGN-E740787 680 0 668 C11HBa0034I10.2 87341 39705 41728 3 65,147,456, 0,65,212, 39705,40168,41272, 789 1 0 0 0 0 3 1816 + SGN-E701598 795 5 795 C11HBa0034I10.2 87341 37641 40247 4 357,61,293,79, 5,362,423,716, 37641,38166,39477,40168, 120 3 0 0 3 213 1 4 + SGN-E712836 414 63 399 C11HBa0034I10.2 87341 27264 27391 4 28,10,30,55, 63,92,309,344, 27264,27292,27302,27336, 385 13 0 0 2 2 2 632 + SGN-E246317 400 0 400 C11HBa0034I10.2 87341 17647 18677 3 53,92,253, 0,54,147, 17647,18241,18424, 252 8 0 0 0 0 3 20 - SGN-E249253 618 358 618 C11HBa0034I10.2 87341 61183 61463 4 80,52,26,102, 0,80,132,158, 61183,61264,61333,61361, 308 10 0 0 0 0 3 20 - SGN-E253695 540 222 540 C11HBa0034I10.2 87341 61125 61463 4 138,52,26,102, 0,138,190,216, 61125,61264,61333,61361, 53 2 0 0 0 0 1 149 + SGN-E256217 514 0 55 C11HBa0034I10.2 87341 61259 61463 2 6,49, 0,6, 61259,61414, 542 0 0 0 0 0 2 1418 + SGN-E257683 542 0 542 C11HBa0034I10.2 87341 37724 39684 3 274,61,207, 0,274,335, 37724,38166,39477, 289 3 0 0 6 7 3 1354 + SGN-E259488 299 0 299 C11HBa0034I10.2 87341 21434 23080 9 27,3,97,27,35,6,14,43,40, 0,28,31,129,157,193,200,216,259, 21434,21461,22704,22801,22828,22863,22869,22884,23040, 511 0 0 0 0 0 3 2075 + SGN-E259606 511 0 511 C11HBa0034I10.2 87341 21394 23980 4 70,223,165,53, 0,70,293,458, 21394,22704,23040,23927, 724 0 0 0 0 0 4 2151 + SGN-E257351 724 0 724 C11HBa0034I10.2 87341 21394 24269 5 70,223,165,151,115, 0,70,293,458,609, 21394,22704,23040,23927,24154, 706 2 0 0 0 0 4 2151 + SGN-E263681 708 0 708 C11HBa0034I10.2 87341 21394 24253 5 70,223,165,151,99, 0,70,293,458,609, 21394,22704,23040,23927,24154, 239 0 0 0 0 0 0 0 + SGN-E264309 239 0 239 C11HBa0034I10.2 87341 37727 37966 1 239, 0, 37727, 99 2 0 0 1 43 3 23 - SGN-E217478 385 221 365 C11HBa0034I10.2 87341 61339 61463 4 21,12,38,30, 20,41,96,134, 61339,61361,61374,61433, 103 2 0 0 2 44 3 23 - SGN-E228654 468 304 453 C11HBa0034I10.2 87341 61335 61463 5 4,21,12,38,30, 15,20,41,96,134, 61335,61339,61361,61374,61433, 103 2 0 0 1 43 3 23 - SGN-E229134 397 233 381 C11HBa0034I10.2 87341 61335 61463 4 25,12,38,30, 16,41,96,134, 61335,61361,61374,61433, 46 1 0 0 0 0 0 0 + SGN-E233998 377 313 360 C11HBa0034I10.2 87341 61056 61103 1 47, 313, 61056, 44 1 0 0 0 0 0 0 + SGN-E234253 351 287 332 C11HBa0034I10.2 87341 61056 61101 1 45, 287, 61056, 173 5 0 0 3 28 2 23 - SGN-E272118 458 6 212 C11HBa0034I10.2 87341 48421 48622 5 10,18,12,5,133, 246,257,300,312,319, 48421,48431,48470,48484,48489, 444 0 0 0 0 0 2 342 - SGN-E283992 444 0 444 C11HBa0034I10.2 87341 18257 19043 3 77,361,6, 0,77,438, 18257,18424,19037, 492 0 0 0 0 0 3 2393 + SGN-E280404 492 0 492 C11HBa0034I10.2 87341 15389 18274 4 225,87,147,33, 0,225,312,459, 15389,17337,17554,18241, 428 17 0 0 1 1 0 0 - SGN-E297801 453 0 446 C11HBa0034I10.2 87341 41272 41717 2 79,366, 7,87, 41272,41351, 447 4 0 0 0 0 2 1418 + SGN-E298394 451 0 451 C11HBa0034I10.2 87341 37735 39604 3 263,61,127, 0,263,324, 37735,38166,39477, 49 3 0 0 0 0 0 0 + SGN-E331209 528 14 66 C11HBa0034I10.2 87341 30913 30965 1 52, 14, 30913, 409 30 0 0 1 1 2 1853 + SGN-E324025 489 49 489 C11HBa0034I10.2 87341 15327 17619 4 65,222,87,65, 49,115,337,424, 15327,15392,17337,17554, 46 0 0 0 0 0 0 0 + SGN-E362032 430 375 421 C11HBa0034I10.2 87341 61056 61102 1 46, 375, 61056, 789 9 0 0 2 12 4 1367 + SGN-E696825 828 0 810 C11HBa0034I10.2 87341 39585 41750 5 185,147,337,104,25, 0,185,332,673,785, 39585,40168,41272,41612,41725, 804 14 0 0 0 0 5 2774 + SGN-E692985 822 4 822 C11HBa0034I10.2 87341 37734 41326 6 63,200,61,293,147,54, 4,67,267,328,621,768, 37734,37798,38166,39477,40168,41272,