psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 32 0 0 0 0 0 0 0 + SGN-E745449 1351 468 500 C11HBa0096D22.2 23542 3212 3244 1 32, 468, 3212, 32 0 0 0 0 0 0 0 + SGN-E744990 1820 531 563 C11HBa0096D22.2 23542 3212 3244 1 32, 531, 3212, 32 0 0 0 0 0 0 0 + SGN-E744933 1596 312 344 C11HBa0096D22.2 23542 3212 3244 1 32, 312, 3212, 725 0 0 2 0 0 0 0 + SGN-E687919 727 0 727 C11HBa0096D22.2 23542 11822 12549 1 727, 0, 11822, 44 1 0 0 1 3 1 1 - SGN-E368336 765 700 748 C11HBa0096D22.2 23542 9360 9406 2 30,15, 17,50, 9360,9391, 43 1 0 0 0 0 0 0 + SGN-E375649 732 268 312 C11HBa0096D22.2 23542 3211 3255 1 44, 268, 3211, 43 1 0 0 0 0 0 0 + SGN-E375650 497 336 380 C11HBa0096D22.2 23542 3211 3255 1 44, 336, 3211, 36 1 0 0 0 0 0 0 + SGN-E377478 475 56 93 C11HBa0096D22.2 23542 3220 3257 1 37, 56, 3220, 35 1 0 0 0 0 0 0 - SGN-E391288 726 680 716 C11HBa0096D22.2 23542 3223 3259 1 36, 10, 3223, 37 1 0 0 0 0 0 0 + SGN-E396796 515 113 151 C11HBa0096D22.2 23542 3219 3257 1 38, 113, 3219, 36 1 0 0 0 0 1 144 + SGN-E397945 663 626 663 C11HBa0096D22.2 23542 9368 9549 2 29,8, 626,655, 9368,9541, 53 1 0 0 1 103 1 574 + SGN-E538689 384 30 187 C11HBa0096D22.2 23542 2629 3257 2 18,36, 30,151, 2629,3221, 34 0 0 0 0 0 0 0 + SGN-E538999 585 453 487 C11HBa0096D22.2 23542 3212 3246 1 34, 453, 3212, 34 0 0 0 0 0 0 0 + SGN-E539002 585 453 487 C11HBa0096D22.2 23542 3212 3246 1 34, 453, 3212, 37 1 0 0 0 0 0 0 + SGN-E540080 642 370 408 C11HBa0096D22.2 23542 3219 3257 1 38, 370, 3219, 693 0 0 0 0 0 1 852 + SGN-E543413 728 0 693 C11HBa0096D22.2 23542 19729 21274 2 157,536, 0,157, 19729,20738, 794 2 0 0 0 0 2 3238 + SGN-E543414 796 0 796 C11HBa0096D22.2 23542 15754 19788 3 421,290,85, 0,421,711, 15754,19412,19703, 497 0 0 0 0 0 1 3237 + SGN-E543455 497 0 497 C11HBa0096D22.2 23542 15754 19488 2 421,76, 0,421, 15754,19412, 40 1 0 0 0 0 0 0 + SGN-E548413 835 746 787 C11HBa0096D22.2 23542 3212 3253 1 41, 746, 3212, 31 0 0 0 0 0 0 0 + SGN-E548413 835 742 773 C11HBa0096D22.2 23542 3211 3242 1 31, 742, 3211, 43 1 0 0 0 0 0 0 + SGN-E719748 868 378 422 C11HBa0096D22.2 23542 3211 3255 1 44, 378, 3211, 36 1 0 0 0 0 0 0 + SGN-E720366 620 273 310 C11HBa0096D22.2 23542 3223 3260 1 37, 273, 3223, 564 19 0 0 1 12 1 12 + SGN-E724574 636 41 636 C11HBa0096D22.2 23542 9660 10255 2 34,549, 41,87, 9660,9706, 31 0 0 0 0 0 0 0 - SGN-E724581 557 28 59 C11HBa0096D22.2 23542 3212 3243 1 31, 498, 3212, 43 1 0 0 0 0 0 0 + SGN-E725168 826 378 422 C11HBa0096D22.2 23542 3211 3255 1 44, 378, 3211, 35 1 0 0 0 0 0 0 - SGN-E733593 810 767 803 C11HBa0096D22.2 23542 3221 3257 1 36, 7, 3221, 32 0 0 0 0 0 0 0 + SGN-E735271 553 99 131 C11HBa0096D22.2 23542 3211 3243 1 32, 99, 3211, 835 0 0 0 0 0 2 2455 + SGN-E700547 862 0 835 C11HBa0096D22.2 23542 19544 22834 3 342,332,161, 0,342,674, 19544,20738,22673, 789 0 0 0 0 0 2 690 + SGN-E706159 789 0 789 C11HBa0096D22.2 23542 9690 11169 3 645,117,27, 0,645,762, 9690,10938,11142, 32 0 0 0 0 0 0 0 + SGN-E243086 383 76 108 C11HBa0096D22.2 23542 3212 3244 1 32, 76, 3212, 32 0 0 0 0 0 0 0 + SGN-E244363 648 544 576 C11HBa0096D22.2 23542 3212 3244 1 32, 544, 3212, 32 0 0 0 0 0 0 0 + SGN-E246187 522 473 505 C11HBa0096D22.2 23542 3212 3244 1 32, 473, 3212, 32 0 0 0 0 0 0 0 + SGN-E247800 632 441 473 C11HBa0096D22.2 23542 3212 3244 1 32, 441, 3212, 32 0 0 0 0 0 0 0 + SGN-E248825 578 441 473 C11HBa0096D22.2 23542 3212 3244 1 32, 441, 3212, 32 0 0 0 0 0 0 0 + SGN-E249280 642 538 570 C11HBa0096D22.2 23542 3212 3244 1 32, 538, 3212, 32 0 0 0 0 0 0 0 + SGN-E248217 471 147 179 C11HBa0096D22.2 23542 3212 3244 1 32, 147, 3212, 43 1 0 0 0 0 0 0 + SGN-E256108 585 336 380 C11HBa0096D22.2 23542 3211 3255 1 44, 336, 3211, 32 0 0 0 0 0 0 0 + SGN-E257926 530 321 353 C11HBa0096D22.2 23542 3212 3244 1 32, 321, 3212, 429 0 0 0 0 0 1 852 + SGN-E267844 429 0 429 C11HBa0096D22.2 23542 19603 20884 2 283,146, 0,283, 19603,20738, 35 1 0 0 0 0 0 0 - SGN-E225273 344 215 251 C11HBa0096D22.2 23542 3221 3257 1 36, 93, 3221, 35 1 0 0 0 0 0 0 - SGN-E225419 437 308 344 C11HBa0096D22.2 23542 3221 3257 1 36, 93, 3221, 35 1 0 0 0 0 0 0 - SGN-E218176 384 266 302 C11HBa0096D22.2 23542 3221 3257 1 36, 82, 3221, 35 1 0 0 0 0 0 0 - SGN-E226545 375 247 283 C11HBa0096D22.2 23542 3221 3257 1 36, 92, 3221, 34 2 0 0 0 0 0 0 - SGN-E238995 344 215 251 C11HBa0096D22.2 23542 3221 3257 1 36, 93, 3221, 43 1 0 0 0 0 0 0 + SGN-E276578 508 345 389 C11HBa0096D22.2 23542 3211 3255 1 44, 345, 3211, 32 0 0 0 0 0 0 0 + SGN-E270536 526 62 94 C11HBa0096D22.2 23542 3212 3244 1 32, 62, 3212, 31 1 0 0 0 0 0 0 + SGN-E273569 459 263 295 C11HBa0096D22.2 23542 3225 3257 1 32, 263, 3225, 34 0 0 0 0 0 0 0 + SGN-E279510 584 452 486 C11HBa0096D22.2 23542 3212 3246 1 34, 452, 3212, 35 1 0 0 0 0 0 0 + SGN-E279633 359 134 170 C11HBa0096D22.2 23542 3221 3257 1 36, 134, 3221, 32 0 0 0 0 0 0 0 + SGN-E282130 351 160 192 C11HBa0096D22.2 23542 3212 3244 1 32, 160, 3212, 32 0 0 0 0 0 0 0 + SGN-E290690 646 542 574 C11HBa0096D22.2 23542 3212 3244 1 32, 542, 3212, 35 1 0 0 0 0 0 0 - SGN-E293072 605 521 557 C11HBa0096D22.2 23542 3221 3257 1 36, 48, 3221, 32 0 0 0 0 0 0 0 + SGN-E294577 535 265 297 C11HBa0096D22.2 23542 3212 3244 1 32, 265, 3212, 35 1 0 0 0 0 0 0 - SGN-E300603 617 521 557 C11HBa0096D22.2 23542 3221 3257 1 36, 60, 3221, 592 0 0 0 0 0 1 3237 + SGN-E304054 592 0 592 C11HBa0096D22.2 23542 15755 19584 2 420,172, 0,420, 15755,19412, 525 0 0 0 0 0 0 0 + SGN-E304191 557 0 525 C11HBa0096D22.2 23542 20751 21276 1 525, 0, 20751, 527 0 0 0 0 0 1 3237 + SGN-E333664 527 0 527 C11HBa0096D22.2 23542 16026 19790 2 149,378, 0,149, 16026,19412, 32 0 0 0 0 0 0 0 + SGN-E333840 653 527 559 C11HBa0096D22.2 23542 3212 3244 1 32, 527, 3212, 538 0 0 0 0 0 1 3237 + SGN-E331462 538 0 538 C11HBa0096D22.2 23542 15755 19530 2 420,118, 0,420, 15755,19412, 35 1 0 0 0 0 0 0 + SGN-E326629 614 79 115 C11HBa0096D22.2 23542 3211 3247 1 36, 79, 3211, 523 1 0 0 1 1 1 1 + SGN-E328326 525 0 525 C11HBa0096D22.2 23542 11823 12348 3 510,10,4, 0,511,521, 11823,12333,12344, 32 0 0 0 0 0 0 0 + SGN-E324336 635 315 347 C11HBa0096D22.2 23542 3212 3244 1 32, 315, 3212, 32 0 0 0 0 0 0 0 + SGN-E313995 539 490 522 C11HBa0096D22.2 23542 3212 3244 1 32, 490, 3212, 612 0 0 0 0 0 0 0 + SGN-E312312 612 0 612 C11HBa0096D22.2 23542 9670 10282 1 612, 0, 9670, 38 0 0 0 0 0 1 36 + SGN-E338374 466 428 466 C11HBa0096D22.2 23542 3213 3287 2 30,8, 428,458, 3213,3279, 32 0 0 0 0 0 0 0 + SGN-E335434 448 380 412 C11HBa0096D22.2 23542 3212 3244 1 32, 380, 3212, 33 0 0 0 0 0 0 0 + SGN-E335476 582 361 394 C11HBa0096D22.2 23542 3224 3257 1 33, 361, 3224, 32 0 0 0 0 0 0 0 + SGN-E336439 424 347 379 C11HBa0096D22.2 23542 3212 3244 1 32, 347, 3212, 32 0 0 0 0 0 0 0 + SGN-E344958 738 525 557 C11HBa0096D22.2 23542 3212 3244 1 32, 525, 3212, 32 0 0 0 0 0 0 0 + SGN-E345091 728 494 526 C11HBa0096D22.2 23542 3212 3244 1 32, 494, 3212, 32 0 0 0 0 0 0 0 + SGN-E345941 684 305 337 C11HBa0096D22.2 23542 3212 3244 1 32, 305, 3212, 40 2 0 0 0 0 0 0 + SGN-E349548 618 5 47 C11HBa0096D22.2 23542 3215 3257 1 42, 5, 3215,