psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 961 3 0 0 0 0 3 1214 - SGN-E747448 976 0 964 C11HBa0249E07.1 128652 14796 16974 4 373,218,104,269, 12,385,603,707, 14796,15858,16162,16705, 516 0 0 0 0 0 2 517 - SGN-E553525 516 0 516 C11HBa0249E07.1 128652 55104 56137 3 112,399,5, 0,112,511, 55104,55553,56132, 589 0 0 0 0 0 1 337 - SGN-E555343 589 0 589 C11HBa0249E07.1 128652 55007 55933 2 209,380, 0,209, 55007,55553, 742 0 0 0 0 0 3 1798 + SGN-E554042 742 0 742 C11HBa0249E07.1 128652 51832 54372 4 330,169,120,123, 0,330,499,619, 51832,52872,54028,54249, 836 1 0 0 1 1 5 2002 + SGN-E554164 838 0 838 C11HBa0249E07.1 128652 51935 54774 7 227,169,120,144,78,73,26, 0,227,396,516,660,739,812, 51935,52872,54028,54249,54484,54562,54748, 790 0 0 0 0 0 4 1889 + SGN-E555458 809 19 809 C11HBa0249E07.1 128652 51814 54493 5 348,169,120,144,9, 19,367,536,656,800, 51814,52872,54028,54249,54484, 804 0 0 0 0 0 4 1889 + SGN-E554582 804 0 804 C11HBa0249E07.1 128652 51816 54509 5 346,169,120,144,25, 0,346,515,635,779, 51816,52872,54028,54249,54484, 298 0 0 0 0 0 0 0 + SGN-E688255 599 301 599 C11HBa0249E07.1 128652 147 445 1 298, 301, 147, 85 5 0 1 1 6 1 5 - SGN-E689148 770 673 770 C11HBa0249E07.1 128652 98835 98931 2 21,70, 0,27, 98835,98861, 462 0 0 0 0 0 3 971 - SGN-E551695 487 0 462 C11HBa0249E07.1 128652 3008 4441 4 221,90,100,51, 25,246,336,436, 3008,3362,4186,4390, 487 0 0 0 0 0 1 337 + SGN-E553214 524 0 487 C11HBa0249E07.1 128652 55098 55922 2 118,369, 0,118, 55098,55553, 486 0 0 0 0 0 1 337 + SGN-E552765 561 0 486 C11HBa0249E07.1 128652 55098 55921 2 118,368, 0,118, 55098,55553, 574 3 0 0 0 0 3 1848 - SGN-E205341 577 0 577 C11HBa0249E07.1 128652 6652 9077 4 79,96,81,321, 0,79,175,256, 6652,6823,7032,8756, 413 11 0 0 0 0 2 1756 - SGN-E205390 424 0 424 C11HBa0249E07.1 128652 6893 9073 3 26,81,317, 0,26,107, 6893,7032,8756, 474 13 0 0 0 0 2 1756 - SGN-E212050 487 0 487 C11HBa0249E07.1 128652 6825 9068 3 94,81,312, 0,94,175, 6825,7032,8756, 628 3 0 2 0 0 5 2124 - SGN-E211374 633 0 633 C11HBa0249E07.1 128652 6262 9019 6 39,70,84,96,81,263, 0,39,109,193,289,370, 6262,6440,6647,6823,7032,8756, 570 1 0 0 0 0 3 1848 - SGN-E214278 571 0 571 C11HBa0249E07.1 128652 6649 9068 4 82,96,81,312, 0,82,178,259, 6649,6823,7032,8756, 598 7 0 0 0 0 1 337 + SGN-E556495 636 0 605 C11HBa0249E07.1 128652 55007 55949 2 209,396, 0,209, 55007,55553, 630 2 0 0 0 0 4 1215 - SGN-E309185 632 0 632 C11HBa0249E07.1 128652 15114 16961 5 55,120,97,104,256, 0,55,175,272,376, 15114,15858,15979,16162,16705, 509 3 0 0 0 0 2 525 - SGN-E308698 512 0 512 C11HBa0249E07.1 128652 15928 16965 3 148,104,260, 0,148,252, 15928,16162,16705, 537 4 0 0 0 0 2 525 - SGN-E310863 541 0 541 C11HBa0249E07.1 128652 15907 16973 3 169,104,268, 0,169,273, 15907,16162,16705, 512 2 0 0 0 0 2 525 - SGN-E310819 514 0 514 C11HBa0249E07.1 128652 15930 16969 3 146,104,264, 0,146,250, 15930,16162,16705, 239 3 0 0 0 0 0 0 - SGN-E307950 242 0 242 C11HBa0249E07.1 128652 16709 16951 1 242, 0, 16709, 589 2 0 0 0 0 3 533 - SGN-E310176 599 0 591 C11HBa0249E07.1 128652 15843 16967 4 7,218,104,262, 8,15,233,337, 15843,15858,16162,16705, 38 1 0 0 1 6 0 0 - SGN-E369471 766 26 71 C11HBa0249E07.1 128652 99018 99057 2 13,26, 695,714, 99018,99031, 551 18 0 0 0 0 1 1172 + SGN-E371246 607 0 569 C11HBa0249E07.1 128652 809 2550 2 315,254, 0,315, 809,2296, 313 0 0 0 2 2 0 0 + SGN-E371247 614 299 614 C11HBa0249E07.1 128652 147 460 3 243,54,16, 299,543,598, 147,390,444, 521 0 0 0 1 3 3 777 - SGN-E391670 524 0 524 C11HBa0249E07.1 128652 14924 16222 4 94,149,218,60, 0,97,246,464, 14924,15020,15858,16162, 186 2 0 0 0 0 0 0 - SGN-E392908 188 0 188 C11HBa0249E07.1 128652 14977 15165 1 188, 0, 14977, 247 14 0 0 3 25 2 957 + SGN-E393845 322 0 286 C11HBa0249E07.1 128652 100597 101815 5 27,74,103,47,10, 0,27,102,227,276, 100597,100625,100699,101758,101805, 270 1 0 0 1 1 1 1 - SGN-E398569 277 0 272 C11HBa0249E07.1 128652 14431 14703 3 26,201,44, 5,32,233, 14431,14457,14659, 72 5 0 0 0 0 0 0 - SGN-E537502 817 615 692 C11HBa0249E07.1 128652 20008 20085 1 77, 125, 20008, 440 11 0 0 2 2 2 526 - SGN-E537983 453 0 453 C11HBa0249E07.1 128652 15980 16957 4 96,104,117,134, 0,96,201,319, 15980,16162,16706,16823, 36 0 0 0 1 1 1 5 - SGN-E541424 517 445 482 C11HBa0249E07.1 128652 99018 99059 3 5,7,24, 35,41,48, 99018,99023,99035, 147 8 0 0 2 6 4 10 + SGN-E542827 624 300 461 C11HBa0249E07.1 128652 101016 101181 6 4,43,4,72,28,4, 300,304,352,356,428,457, 101016,101021,101068,101073,101149,101177, 251 18 0 0 1 18 1 19 - SGN-E546092 308 0 287 C11HBa0249E07.1 128652 53904 54192 2 83,186, 21,122, 53904,54006, 655 12 0 0 0 0 3 1927 - SGN-E546093 667 0 667 C11HBa0249E07.1 128652 56972 59566 4 183,121,82,281, 0,183,304,386, 56972,58955,59194,59285, 133 11 0 0 0 0 0 0 + SGN-E549799 651 507 651 C11HBa0249E07.1 128652 21766 21910 1 144, 507, 21766, 298 0 0 0 0 0 0 0 + SGN-E551266 599 301 599 C11HBa0249E07.1 128652 147 445 1 298, 301, 147, 468 1 0 0 0 0 4 1985 - SGN-E236526 469 0 469 C11HBa0249E07.1 128652 6477 8931 5 33,84,96,81,175, 0,33,117,213,294, 6477,6647,6823,7032,8756, 454 0 0 0 1 1 1 131 + SGN-E719321 669 214 669 C11HBa0249E07.1 128652 147 732 2 395,59, 214,610, 147,673, 349 0 0 0 1 1 0 0 + SGN-E719696 621 271 621 C11HBa0249E07.1 128652 147 496 2 306,43, 271,578, 147,453, 387 0 0 0 0 0 0 0 + SGN-E721309 492 30 417 C11HBa0249E07.1 128652 2358 2745 1 387, 30, 2358, 238 0 0 0 0 0 0 0 + SGN-E723049 507 269 507 C11HBa0249E07.1 128652 147 385 1 238, 269, 147, 567 20 0 0 0 0 4 1985 - SGN-E723072 588 1 588 C11HBa0249E07.1 128652 6466 9038 5 44,84,99,78,282, 0,44,128,227,305, 6466,6647,6823,7035,8756, 415 0 0 0 0 0 0 0 + SGN-E732070 483 60 475 C11HBa0249E07.1 128652 55505 55920 1 415, 60, 55505, 37 2 0 0 0 0 1 24 + SGN-E733645 750 706 745 C11HBa0249E07.1 128652 99036 99099 2 27,12, 706,733, 99036,99087, 38 0 0 0 1 1 1 279 - SGN-E738255 404 365 404 C11HBa0249E07.1 128652 53103 53420 3 9,24,5, 0,9,34, 53103,53391,53415, 123 7 0 0 0 0 1 9 - SGN-E700142 815 685 815 C11HBa0249E07.1 128652 75918 76057 2 32,98, 0,32, 75918,75959, 123 7 0 0 0 0 1 9 - SGN-E700142 815 685 815 C11HBa0249E07.1 128652 111924 112063 2 31,99, 0,31, 111924,111964, 873 2 0 0 0 0 5 5234 + SGN-E700199 875 0 875 C11HBa0249E07.1 128652 36190 42299 6 237,77,103,122,192,144, 0,237,314,417,539,731, 36190,36725,38384,40246,41867,42155, 542 8 0 0 0 0 1 130 + SGN-E709476 550 0 550 C11HBa0249E07.1 128652 290 970 2 253,297, 0,253, 290,673, 271 0 0 0 0 0 0 0 + SGN-E709897 615 344 615 C11HBa0249E07.1 128652 147 418 1 271, 344, 147, 165 12 0 0 0 0 0 0 + SGN-E711024 821 218 395 C11HBa0249E07.1 128652 21766 21943 1 177, 218, 21766, 490 2 0 0 0 0 1 1172 + SGN-E711591 521 8 500 C11HBa0249E07.1 128652 1064 2728 2 60,432, 8,68, 1064,2296, 157 10 0 0 0 0 2 2 + SGN-E243215 460 74 241 C11HBa0249E07.1 128652 120674 120843 3 96,61,10, 74,170,231, 120674,120771,120833, 155 8 0 0 0 0 2 2 - SGN-E243215 460 74 237 C11HBa0249E07.1 128652 101016 101181 3 4,63,96, 223,227,290, 101016,101021,101085, 590 0 0 0 0 0 5 2124 - SGN-E249552 592 0 590 C11HBa0249E07.1 128652 6218 8932 6 83,70,84,96,81,176, 2,85,155,239,335,416, 6218,6440,6647,6823,7032,8756, 517 0 0 0 0 0 1 96 - SGN-E251989 559 18 535 C11HBa0249E07.1 128652 41865 42478 2 194,323, 24,218, 41865,42155, 430 0 0 0 0 0 4 1985 - SGN-E253524 431 1 431 C11HBa0249E07.1 128652 6475 8890 5 35,84,96,81,134, 0,35,119,215,296, 6475,6647,6823,7032,8756, 654 1 0 0 0 0 2 775 - SGN-E268450 655 0 655 C11HBa0249E07.1 128652 14791 16221 3 378,218,59, 0,378,596, 14791,15858,16162, 490 5 0 0 0 0 2 525 - SGN-E266805 495 0 495 C11HBa0249E07.1 128652 15912 16932 3 164,104,227, 0,164,268, 15912,16162,16705, 551 5 0 0 1 1 0 0 - SGN-E265390 557 0 557 C11HBa0249E07.1 128652 14608 15164 2 186,370, 0,187, 14608,14794, 201 0 0 0 0 0 0 0 + SGN-E215819 239 8 209 C11HBa0249E07.1 128652 42270 42471 1 201, 8, 42270, 460 29 0 0 4 16 4 22 + SGN-E215256 537 0 505 C11HBa0249E07.1 128652 73329 73840 7 27,4,50,36,55,206,111, 0,28,35,95,131,186,394, 73329,73356,73364,73429,73467,73523,73729, 52 4 0 0 0 0 0 0 - SGN-E217989 317 240 296 C11HBa0249E07.1 128652 120760 120816 1 56, 21, 120760, 52 4 0 0 0 0 0 0 - SGN-E218065 317 240 296 C11HBa0249E07.1 128652 120760 120816 1 56, 21, 120760, 449 1 0 0 0 0 2 1756 - SGN-E272970 450 0 450 C11HBa0249E07.1 128652 6881 9087 3 38,81,331, 0,38,119, 6881,7032,8756, 267 0 0 0 0 0 0 0 + SGN-E271994 566 299 566 C11HBa0249E07.1 128652 147 414 1 267, 299, 147, 335 23 0 0 0 0 1 174 + SGN-E275375 577 0 358 C11HBa0249E07.1 128652 74499 75031 2 144,214, 0,144, 74499,74817, 273 8 0 0 0 0 1 89 + SGN-E276550 290 9 290 C11HBa0249E07.1 128652 100246 100616 2 240,41, 9,249, 100246,100575, 239 13 0 0 1 15 2 102 + SGN-E276550 290 9 276 C11HBa0249E07.1 128652 74092 74446 3 184,41,27, 9,208,249, 74092,74281,74419, 527 27 0 0 2 10 2 2 + SGN-E276340 604 14 578 C11HBa0249E07.1 128652 100246 100802 4 288,89,74,103, 14,311,400,475, 100246,100535,100625,100699, 481 27 0 0 2 48 2 13 + SGN-E276340 604 41 597 C11HBa0249E07.1 128652 74119 74640 3 157,165,186, 41,213,411, 74119,74281,74454, 577 25 0 0 3 34 3 960 + SGN-E276288 655 19 655 C11HBa0249E07.1 128652 100246 101808 5 288,89,74,103,48, 19,316,405,480,607, 100246,100535,100625,100699,101760, 552 31 0 0 3 53 3 192 + SGN-E276288 655 19 655 C11HBa0249E07.1 128652 74092 74867 4 184,165,186,48, 19,218,416,607, 74092,74281,74454,74819, 377 26 0 0 0 0 2 174 + SGN-E276989 634 37 440 C11HBa0249E07.1 128652 74454 75031 3 186,4,213, 37,223,227, 74454,74670,74818, 443 28 0 0 1 33 4 279 + SGN-E276969 574 8 512 C11HBa0249E07.1 128652 74281 75031 5 41,27,186,4,213, 8,49,109,295,299, 74281,74419,74454,74670,74818, 388 24 0 0 3 25 3 1046 + SGN-E276969 574 0 437 C11HBa0249E07.1 128652 100437 101895 6 49,49,74,103,47,90, 0,49,98,173,298,347, 100437,100575,100625,100699,101758,101805, 591 43 0 0 0 0 1 130 + SGN-E273357 652 18 652 C11HBa0249E07.1 128652 73376 74140 2 37,597, 18,55, 73376,73543, 583 46 0 0 1 5 2 135 + SGN-E273357 652 18 652 C11HBa0249E07.1 128652 99530 100294 3 37,544,48, 18,55,604, 99530,99697,100246, 201 13 0 0 0 0 0 0 + SGN-E274114 610 61 275 C11HBa0249E07.1 128652 74817 75031 1 214, 61, 74817, 413 26 0 0 3 12 6 6 + SGN-E286662 508 0 451 C11HBa0249E07.1 128652 100354 100799 8 59,40,79,34,4,46,75,102, 0,59,99,187,223,227,273,349, 100354,100414,100455,100535,100570,100575,100622,100697, 36 0 0 0 1 1 1 5 - SGN-E297739 515 445 482 C11HBa0249E07.1 128652 99018 99059 3 5,7,24, 33,39,46, 99018,99023,99035, 637 2 0 0 0 0 4 1653 - SGN-E301919 639 0 639 C11HBa0249E07.1 128652 15114 17406 5 55,218,104,256,6, 0,55,273,377,633, 15114,15858,16162,16705,17400, 463 2 0 0 0 0 2 525 - SGN-E301795 465 0 465 C11HBa0249E07.1 128652 15977 16967 3 99,104,262, 0,99,203, 15977,16162,16705, 546 2 0 0 0 0 2 525 - SGN-E308172 548 0 548 C11HBa0249E07.1 128652 15863 16936 3 213,104,231, 0,213,317, 15863,16162,16705, 498 0 0 0 0 0 3 1848 - SGN-E327030 498 0 498 C11HBa0249E07.1 128652 6671 9017 4 60,96,81,261, 0,60,156,237, 6671,6823,7032,8756, 559 36 0 0 1 1 1 1 - SGN-E317478 653 0 596 C11HBa0249E07.1 128652 75030 75626 3 557,4,34, 57,614,619, 75030,75588,75592, 550 37 0 0 3 9 3 7 - SGN-E317478 653 0 596 C11HBa0249E07.1 128652 111042 111636 5 13,5,293,109,167, 57,74,79,376,486, 111042,111056,111062,111360,111469, 645 1 0 1 0 0 4 1977 - SGN-E348558 647 0 647 C11HBa0249E07.1 128652 6443 9067 5 67,84,104,81,311, 0,67,151,255,336, 6443,6647,6815,7032,8756, 735 1 0 0 2 2 7 5236 + SGN-E348025 738 0 738 C11HBa0249E07.1 128652 36270 42242 10 157,77,103,122,162,12,17,24,4,58, 0,157,234,337,459,622,634,651,676,680, 36270,36725,38384,40246,41867,42029,42042,42155,42179,42184, 499 5 0 0 4 12 4 15 - SGN-E354348 545 0 516 C11HBa0249E07.1 128652 14438 14957 7 7,8,8,19,6,158,298, 29,36,46,62,81,88,247, 14438,14447,14456,14475,14495,14501,14659, 451 2 0 0 1 1 0 0 - SGN-E354471 454 0 454 C11HBa0249E07.1 128652 14504 14957 2 155,298, 0,156, 14504,14659, 476 2 0 0 0 0 2 95 - SGN-E357355 478 0 478 C11HBa0249E07.1 128652 14330 14903 3 7,227,244, 0,7,234, 14330,14431,14659, 505 2 0 0 0 0 2 302 - SGN-E357912 507 0 507 C11HBa0249E07.1 128652 14237 15046 3 6,114,387, 0,6,120, 14237,14543,14659, 379 0 0 0 0 0 0 0 + SGN-E351006 394 6 385 C11HBa0249E07.1 128652 2295 2674 1 379, 6, 2295, 34 0 0 0 0 0 1 3 - SGN-E360188 540 130 164 C11HBa0249E07.1 128652 26037 26074 2 24,10, 376,400, 26037,26064, 474 10 0 0 3 4 4 1928 - SGN-E359023 488 0 488 C11HBa0249E07.1 128652 57072 59484 7 83,97,24,82,132,6,60, 0,83,181,205,287,420,428, 57072,58955,59052,59194,59285,59417,59424, 547 13 0 0 0 0 3 1927 - SGN-E355736 560 0 560 C11HBa0249E07.1 128652 57078 59565 4 77,121,82,280, 0,77,198,280, 57078,58955,59194,59285, 470 1 0 0 0 0 5 2017 - SGN-E358898 471 0 471 C11HBa0249E07.1 128652 4441 6929 6 48,80,83,70,84,106, 0,48,128,211,281,365, 4441,4712,6218,6440,6647,6823,