psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 53 1 0 0 0 0 0 0 + SGN-E745343 1020 591 645 C11SLm0052K14.1 100466 15384 15438 1 54, 591, 15384, 607 1 0 0 0 0 1 82 - SGN-E552708 618 0 608 C11SLm0052K14.1 100466 86089 86779 2 425,183, 10,435, 86089,86596, 317 19 0 0 3 43 5 1818 + SGN-E201644 497 118 497 C11SLm0052K14.1 100466 10927 13081 7 24,6,116,30,71,45,44, 118,145,152,307,337,408,453, 10927,10955,10961,11209,12174,12913,13037, 346 6 0 0 0 0 4 1642 + SGN-E209565 360 8 360 C11SLm0052K14.1 100466 10934 12928 5 140,61,71,65,15, 8,148,209,280,345, 10934,11173,12174,12649,12913, 607 1 0 0 0 0 1 82 - SGN-E556217 618 0 608 C11SLm0052K14.1 100466 86089 86779 2 425,183, 10,435, 86089,86596, 463 24 0 0 4 57 7 3455 + SGN-E320973 627 54 598 C11SLm0052K14.1 100466 10927 14869 9 24,6,116,25,71,49,47,81,68, 54,81,88,243,268,339,402,449,530, 10927,10955,10961,11209,12174,12649,12911,13037,14801, 103 6 0 0 1 3 3 14 - SGN-E377955 647 452 564 C11SLm0052K14.1 100466 72224 72347 5 27,40,5,17,20, 83,110,150,158,175, 72224,72252,72295,72300,72327, 104 8 0 0 0 0 2 11 - SGN-E377794 657 443 555 C11SLm0052K14.1 100466 72224 72347 3 24,68,20, 102,126,194, 72224,72249,72327, 614 0 0 0 1 1 3 1470 + SGN-E389481 633 18 633 C11SLm0052K14.1 100466 14800 16884 5 69,49,161,312,23, 18,87,136,297,610, 14800,15685,16047,16549,16861, 650 2 0 0 0 0 8 4533 + SGN-E389744 661 9 661 C11SLm0052K14.1 100466 10934 16119 9 140,61,71,65,45,81,68,49,72, 9,149,210,281,346,391,472,540,589, 10934,11173,12174,12649,12913,13037,14801,15685,16047, 494 28 0 0 3 16 7 3447 + SGN-E391601 724 0 538 C11SLm0052K14.1 100466 12651 16620 9 35,4,7,47,81,68,49,160,71, 0,35,40,61,108,189,257,307,467, 12651,12687,12691,12911,13037,14801,15685,16048,16549, 37 1 0 0 0 0 1 75 + SGN-E391877 487 265 303 C11SLm0052K14.1 100466 65604 65717 2 28,10, 265,293, 65604,65707, 46 2 0 0 0 0 0 0 - SGN-E392888 576 117 165 C11SLm0052K14.1 100466 7030 7078 1 48, 411, 7030, 79 5 0 0 0 0 0 0 - SGN-E395916 452 342 426 C11SLm0052K14.1 100466 46821 46905 1 84, 26, 46821, 433 23 0 1 4 57 7 3455 + SGN-E396494 636 122 636 C11SLm0052K14.1 100466 10927 14839 9 24,6,116,25,71,49,47,81,38, 122,149,156,311,336,407,470,517,598, 10927,10955,10961,11209,12174,12649,12911,13037,14801, 776 14 0 0 2 2 4 15074 - SGN-E546086 792 0 792 C11SLm0052K14.1 100466 20021 35885 6 15,145,147,238,125,120, 0,16,161,309,547,672, 20021,20038,20198,20345,20668,35765, 735 12 0 1 1 10 2 3815 + SGN-E546205 759 1 759 C11SLm0052K14.1 100466 39175 43738 3 101,71,576, 1,102,183, 39175,41007,43162, 723 11 0 0 0 0 1 1 + SGN-E549326 746 0 734 C11SLm0052K14.1 100466 43184 43919 2 705,29, 0,705, 43184,43890, 693 3 0 0 0 0 8 4533 + SGN-E550063 705 9 705 C11SLm0052K14.1 100466 10934 16163 9 140,61,71,65,45,81,68,49,116, 9,149,210,281,346,391,472,540,589, 10934,11173,12174,12649,12913,13037,14801,15685,16047, 34 2 0 0 0 0 0 0 - SGN-E202847 608 79 115 C11SLm0052K14.1 100466 7227 7263 1 36, 493, 7227, 91 1 0 0 3 16 4 87 - SGN-E241951 461 0 108 C11SLm0052K14.1 100466 57591 57770 6 25,2,28,12,12,13, 353,378,380,413,427,448, 57591,57617,57693,57721,57734,57757, 42 1 0 0 1 24 1 265 + SGN-E730450 714 105 172 C11SLm0052K14.1 100466 4112 4420 2 28,15, 105,157, 4112,4405, 45 0 0 0 1 28 2 69 - SGN-E733489 634 553 626 C11SLm0052K14.1 100466 65847 65961 3 12,5,28, 8,48,53, 65847,65925,65933, 593 2 0 0 1 1 3 928 - SGN-E733976 605 4 600 C11SLm0052K14.1 100466 69008 70531 5 190,250,58,27,70, 5,196,446,504,531, 69008,69198,69898,70340,70461, 33 0 0 0 0 0 1 3 - SGN-E734052 624 554 587 C11SLm0052K14.1 100466 65925 65961 2 5,28, 37,42, 65925,65933, 33 0 0 0 0 0 1 3 - SGN-E734356 633 553 586 C11SLm0052K14.1 100466 65925 65961 2 5,28, 47,52, 65925,65933, 849 1 0 0 0 0 3 1458 - SGN-E702166 850 0 850 C11SLm0052K14.1 100466 20379 22687 4 204,179,257,210, 0,204,383,640, 20379,20668,20936,22477, 39 0 0 0 0 0 2 305 - SGN-E712844 690 633 672 C11SLm0052K14.1 100466 65602 65946 3 8,16,15, 18,26,42, 65602,65622,65931, 43 0 0 0 1 6 2 16 - SGN-E715773 657 253 302 C11SLm0052K14.1 100466 65902 65961 3 10,5,28, 355,365,376, 65902,65925,65933, 485 0 0 0 0 0 1 1550 - SGN-E246613 485 0 485 C11SLm0052K14.1 100466 29148 31183 2 330,155, 0,330, 29148,31028, 34 2 0 0 0 0 0 0 + SGN-E281270 361 246 282 C11SLm0052K14.1 100466 7227 7263 1 36, 246, 7227, 34 2 0 0 0 0 0 0 + SGN-E281559 245 130 166 C11SLm0052K14.1 100466 7227 7263 1 36, 130, 7227, 171 8 0 0 3 27 1 21 + SGN-E272118 458 6 212 C11SLm0052K14.1 100466 28292 28492 4 74,77,18,10, 6,81,183,202, 28292,28366,28464,28482, 364 0 0 0 0 0 4 1336 + SGN-E278677 412 0 364 C11SLm0052K14.1 100466 68829 70529 5 9,202,58,27,68, 0,9,211,269,296, 68829,69246,69898,70340,70461, 69 3 0 0 0 0 0 0 + SGN-E331684 607 305 377 C11SLm0052K14.1 100466 62467 62539 1 72, 305, 62467, 41 2 0 0 0 0 0 0 + SGN-E331684 607 261 304 C11SLm0052K14.1 100466 62424 62467 1 43, 261, 62424, 32 0 0 0 0 0 0 0 - SGN-E311988 558 1 33 C11SLm0052K14.1 100466 64596 64628 1 32, 525, 64596, 577 0 0 0 0 0 3 928 + SGN-E347673 611 34 611 C11SLm0052K14.1 100466 69008 70513 4 440,58,27,52, 34,474,532,559, 69008,69898,70340,70461, 73 1 0 0 1 15 3 4955 - SGN-E354953 583 81 170 C11SLm0052K14.1 100466 57591 62620 4 25,23,11,15, 413,438,461,487, 57591,57617,62560,62605, 31 0 0 0 0 0 0 0 - SGN-E366418 647 36 67 C11SLm0052K14.1 100466 64361 64392 1 31, 580, 64361, 442 9 0 0 1 1 2 17 - SGN-E691986 503 1 453 C11SLm0052K14.1 100466 20013 20481 3 23,145,283, 50,74,219, 20013,20038,20198, 423 14 0 0 1 1 2 17 + SGN-E695826 540 97 535 C11SLm0052K14.1 100466 20023 20477 3 13,145,279, 97,111,256, 20023,20038,20198, 558 13 0 0 1 1 2 15057 - SGN-E357238 572 0 572 C11SLm0052K14.1 100466 20256 35884 4 89,238,125,119, 0,90,328,453, 20256,20345,20668,35765, 366 12 0 0 1 10 2 3815 + SGN-E358650 388 0 388 C11SLm0052K14.1 100466 39177 43370 3 99,71,208, 0,99,180, 39177,41007,43162,