psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 301 6 0 0 0 0 3 20 + SGN-U313322 661 354 661 C11HBa0054I23.2 166744 160421 160748 4 113,19,4,171, 354,467,486,490, 160421,160535,160571,160577, 337 21 0 0 1 3 4 63 - SGN-U313328 1289 512 873 C11HBa0054I23.2 166744 160407 160828 6 9,97,40,168,25,19, 416,425,525,565,733,758, 160407,160438,160535,160579,160775,160809, 40 0 0 0 0 0 0 0 + SGN-U313384 884 709 749 C11HBa0054I23.2 166744 40967 41007 1 40, 709, 40967, 41 0 0 0 0 0 0 0 - SGN-U314410 682 553 594 C11HBa0054I23.2 166744 160789 160830 1 41, 88, 160789, 76 4 0 0 0 0 1 172 - SGN-U315762 1094 1014 1094 C11HBa0054I23.2 166744 160575 160827 2 9,71, 0,9, 160575,160756, 47 0 0 0 1 228 1 1538 + SGN-U317381 1449 1127 1402 C11HBa0054I23.2 166744 40357 41942 2 30,17, 1127,1385, 40357,41925, 105 4 0 0 1 42 1 21 + SGN-U317986 1842 1675 1826 C11HBa0054I23.2 166744 160422 160552 3 21,11,77, 1675,1696,1749, 160422,160464,160475, 47 0 0 0 1 135 1 259 + SGN-U318232 2127 1939 2121 C11HBa0054I23.2 166744 63921 64227 2 30,17, 1939,2104, 63921,64210, 494 2 0 0 0 0 1 1613 + SGN-U318262 618 0 496 C11HBa0054I23.2 166744 164576 166685 2 68,428, 0,68, 164576,166257, 599 0 0 0 0 0 1 4057 - SGN-U319522 631 22 621 C11HBa0054I23.2 166744 127961 132617 2 439,160, 10,449, 127961,132457, 35 3 0 0 0 0 0 0 + SGN-U319551 903 790 828 C11HBa0054I23.2 166744 40969 41007 1 38, 790, 40969, 1563 0 0 0 0 0 4 4161 - SGN-U320601 1575 0 1563 C11HBa0054I23.2 166744 56801 62525 5 1030,105,237,89,102, 12,1042,1147,1384,1473, 56801,58812,58998,59892,62423, 87 4 0 0 0 0 0 0 + SGN-U322488 1584 1493 1584 C11HBa0054I23.2 166744 160424 160515 1 91, 1493, 160424, 109 3 0 0 1 3 1 4 + SGN-U323442 750 568 683 C11HBa0054I23.2 166744 106613 106729 3 21,76,15, 568,592,668, 106613,106634,106714, 178 0 0 0 0 0 1 616 - SGN-U324634 1492 8 186 C11HBa0054I23.2 166744 193 987 2 25,153, 1306,1331, 193,834, 1183 1 0 0 0 0 0 0 - SGN-U324858 1206 0 1184 C11HBa0054I23.2 166744 137268 138452 1 1184, 22, 137268, 38 0 0 0 0 0 0 0 + SGN-U325619 736 615 653 C11HBa0054I23.2 166744 40967 41005 1 38, 615, 40967, 950 1 0 0 0 0 5 3316 + SGN-U325668 986 0 951 C11HBa0054I23.2 166744 159306 163573 6 28,75,84,443,314,7, 0,28,103,187,630,944, 159306,159415,162643,162807,163251,163566, 631 1 0 0 0 0 1 81 - SGN-U328084 647 0 632 C11HBa0054I23.2 166744 75188 75901 2 623,9, 15,638, 75188,75892, 707 0 0 0 0 0 5 3358 - SGN-U328492 711 4 711 C11HBa0054I23.2 166744 52367 56432 6 174,104,73,27,112,217, 0,174,278,351,378,490, 52367,52625,53500,53653,54764,56215, 835 0 0 0 0 0 1 564 - SGN-U328806 835 0 835 C11HBa0054I23.2 166744 7786 9185 2 597,238, 0,597, 7786,8947, 51 0 0 0 0 0 0 0 - SGN-U329159 453 380 431 C11HBa0054I23.2 166744 160777 160828 1 51, 22, 160777, 547 7 0 0 0 0 2 172 + SGN-U329605 554 0 554 C11HBa0054I23.2 166744 73459 74185 3 211,202,141, 0,211,413, 73459,73755,74044, 531 23 0 0 0 0 2 743 + SGN-U329605 554 0 554 C11HBa0054I23.2 166744 111918 113215 3 211,202,141, 0,211,413, 111918,112215,113074, 554 0 0 0 0 0 2 171 - SGN-U329605 554 0 554 C11HBa0054I23.2 166744 76228 76953 3 141,202,211, 0,141,343, 76228,76456,76742, 642 4 0 0 0 0 4 3881 - SGN-U330462 646 0 646 C11HBa0054I23.2 166744 121368 125895 5 134,89,68,79,276, 0,134,223,291,370, 121368,121981,124644,125112,125619, 30 0 0 0 0 0 0 0 - SGN-U331571 780 358 388 C11HBa0054I23.2 166744 40967 40997 1 30, 392, 40967, 103 7 0 0 0 0 0 0 - SGN-U332394 688 32 142 C11HBa0054I23.2 166744 108039 108149 1 110, 546, 108039, 780 1 0 0 0 0 0 0 + SGN-U332626 819 31 812 C11HBa0054I23.2 166744 65516 66297 1 781, 31, 65516, 40 0 0 0 0 0 0 0 - SGN-U333249 377 319 359 C11HBa0054I23.2 166744 160786 160826 1 40, 18, 160786, 233 17 0 0 0 0 0 0 - SGN-U334276 506 256 506 C11HBa0054I23.2 166744 160578 160828 1 250, 0, 160578, 104 1 0 0 0 0 0 0 + SGN-U334277 387 282 387 C11HBa0054I23.2 166744 160422 160527 1 105, 282, 160422, 30 0 0 0 0 0 0 0 + SGN-U335018 440 200 230 C11HBa0054I23.2 166744 4369 4399 1 30, 200, 4369, 46 1 0 0 1 4 1 2 + SGN-U336043 542 2 53 C11HBa0054I23.2 166744 106672 106721 2 24,23, 2,30, 106672,106698, 515 0 0 0 0 0 1 1613 + SGN-U336448 2257 1 516 C11HBa0054I23.2 166744 164557 166685 2 87,428, 1,88, 164557,166257, 107 7 0 0 0 0 0 0 + SGN-U337161 232 69 183 C11HBa0054I23.2 166744 56807 56921 1 114, 69, 56807, 85 4 0 0 0 0 0 0 - SGN-U337170 812 28 117 C11HBa0054I23.2 166744 160678 160767 1 89, 695, 160678, 38 0 0 0 0 0 2 37 + SGN-U338514 592 523 561 C11HBa0054I23.2 166744 41865 41940 3 12,6,20, 523,535,541, 41865,41910,41920, 162 2 0 0 0 0 0 0 + SGN-U339474 180 8 172 C11HBa0054I23.2 166744 7450 7614 1 164, 8, 7450, 302 7 0 0 3 21 0 0 - SGN-U339475 347 4 334 C11HBa0054I23.2 166744 7489 7798 4 53,59,130,67, 13,67,137,276, 7489,7542,7601,7731, 111 4 0 0 2 52 4 79 + SGN-U341042 741 88 255 C11HBa0054I23.2 166744 104680 104874 5 4,61,16,13,21, 88,92,155,221,234, 104680,104685,104757,104839,104853, 92 2 0 0 2 129 3 57 + SGN-U341042 741 82 305 C11HBa0054I23.2 166744 84150 84301 4 10,61,11,12, 82,92,155,293, 84150,84161,84233,84289, 39 0 0 0 0 0 0 0 + SGN-U341766 735 16 55 C11HBa0054I23.2 166744 40968 41007 1 39, 16, 40968, 683 0 0 0 0 0 0 0 - SGN-U343677 683 0 683 C11HBa0054I23.2 166744 9236 9919 1 683, 0, 9236, 401 0 0 0 0 0 0 0 + SGN-U343723 401 0 401 C11HBa0054I23.2 166744 40295 40696 1 401, 0, 40295, 37 1 0 0 0 0 2 3 + SGN-U344443 617 549 587 C11HBa0054I23.2 166744 41899 41940 3 10,6,22, 549,559,565, 41899,41910,41918, 60 0 0 0 1 1 0 0 - SGN-U345977 514 0 61 C11HBa0054I23.2 166744 160420 160480 2 4,56, 453,458, 160420,160424, 285 16 0 0 2 25 3 110 + SGN-U346178 412 86 412 C11HBa0054I23.2 166744 111290 111701 5 44,175,43,4,35, 86,154,329,373,377, 111290,111361,111618,111661,111666, 231 16 0 0 0 0 1 93 + SGN-U346178 412 165 412 C11HBa0054I23.2 166744 72902 73242 2 164,83, 165,329, 72902,73159, 406 6 0 0 0 0 1 94 - SGN-U346178 412 0 412 C11HBa0054I23.2 166744 77170 77676 2 83,329, 0,83, 77170,77347,