psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 654 0 0 0 0 0 7 4887 - SGN-U316395 654 0 654 C11HBa0143O06.1 132613 91159 96700 8 57,84,45,61,159,147,70,31, 0,57,141,186,247,406,553,623, 91159,93428,93596,93817,95540,95795,96161,96669, 2454 1 0 0 1 8 23 14883 - SGN-U316396 2464 1 2464 C11HBa0143O06.1 132613 89349 106687 24 130,381,81,61,61,71,63,77,84,45,61,402,70,74,45,192,70,74,45,50,34,49,51,184, 0,138,519,600,661,722,793,856,933,1017,1062,1123,1525,1595,1669,1714,1906,1976,2050,2095,2145,2179,2228,2279, 89349,89484,89960,90186,90508,90651,91005,91139,93428,93596,93817,95540,96161,96669,96855,96999,100280,100591,100801,100946,103377,103487,104779,106503, 33 0 0 0 0 0 0 0 - SGN-U316498 2107 0 33 C11HBa0143O06.1 132613 6115 6148 1 33, 2074, 6115, 35 3 0 0 0 0 0 0 + SGN-U316749 1080 94 132 C11HBa0143O06.1 132613 38972 39010 1 38, 94, 38972, 1923 3 0 0 0 0 11 3557 - SGN-U316920 1938 0 1926 C11HBa0143O06.1 132613 121181 126664 12 347,223,170,88,47,166,79,109,102,53,181,361, 12,359,582,752,840,887,1053,1132,1241,1343,1396,1577, 121181,121636,122041,122304,122393,123809,124169,124362,124541,125095,125255,126303, 601 13 0 0 1 1 2 2497 - SGN-U318304 624 0 615 C11HBa0143O06.1 132613 55065 58176 3 287,279,48, 9,296,576, 55065,57845,58128, 767 8 0 0 0 0 1 2493 - SGN-U318305 786 1 776 C11HBa0143O06.1 132613 54919 58187 2 433,342, 10,443, 54919,57845, 1078 2 0 0 0 0 7 3390 + SGN-U320058 1140 0 1080 C11HBa0143O06.1 132613 73258 77728 8 187,96,68,34,64,60,167,404, 0,187,283,351,385,449,509,676, 73258,74581,74794,75038,75074,75735,77086,77324, 279 0 0 0 0 0 0 0 + SGN-U320059 295 0 279 C11HBa0143O06.1 132613 77122 77401 1 279, 0, 77122, 1136 0 0 0 1 2 10 3743 + SGN-U320992 1210 72 1210 C11HBa0143O06.1 132613 113721 118600 11 194,153,116,92,22,69,99,274,49,58,10, 72,266,419,535,627,649,718,817,1093,1142,1200, 113721,115068,115306,115604,116096,116186,117817,118027,118302,118352,118590, 1441 0 0 0 0 0 5 3886 - SGN-U321365 1476 0 1441 C11HBa0143O06.1 132613 4828 10155 6 324,228,100,89,480,220, 35,359,587,687,776,1256, 4828,6055,7733,8163,8676,9935, 471 15 0 0 2 14 4 277 + SGN-U322022 1358 841 1341 C11HBa0143O06.1 132613 14153 14916 5 180,222,22,13,49, 841,1021,1249,1279,1292, 14153,14603,14830,14853,14867, 1341 0 0 0 0 0 5 1826 - SGN-U322022 1358 0 1341 C11HBa0143O06.1 132613 108772 111939 6 320,180,207,156,68,410, 17,337,517,724,880,948, 108772,109362,110283,110867,111367,111529, 1186 0 0 0 0 0 2 1086 + SGN-U323108 1186 0 1186 C11HBa0143O06.1 132613 51647 53919 3 56,280,850, 0,56,336, 51647,52295,53069, 659 0 0 0 0 0 0 0 + SGN-U323448 754 0 659 C11HBa0143O06.1 132613 27602 28261 1 659, 0, 27602, 40 0 0 0 1 9 2 8 - SGN-U325492 900 789 838 C11HBa0143O06.1 132613 93720 93768 3 13,7,20, 62,75,91, 93720,93738,93748, 851 1 0 0 1 4 7 2967 + SGN-U326073 874 0 856 C11HBa0143O06.1 132613 67507 71326 8 140,94,98,156,78,132,81,73, 0,144,238,336,492,570,702,783, 67507,68230,69268,69473,70144,70603,71021,71253, 910 1 0 0 0 0 0 0 - SGN-U326970 971 60 971 C11HBa0143O06.1 132613 131702 132613 1 911, 0, 131702, 652 0 0 1 0 0 0 0 + SGN-U331274 653 0 653 C11HBa0143O06.1 132613 116925 117578 1 653, 0, 116925, 785 0 0 0 0 0 2 565 - SGN-U331760 788 3 788 C11HBa0143O06.1 132613 80200 81550 3 620,93,72, 0,620,713, 80200,81294,81478, 691 0 0 0 1 1 6 7579 + SGN-U332351 692 0 692 C11HBa0143O06.1 132613 39008 47278 8 19,142,69,75,72,70,50,194, 0,20,162,231,306,378,448,498, 39008,39027,39322,41136,42051,42413,42575,47084, 604 13 0 0 2 2 7 8963 - SGN-U335647 619 0 619 C11HBa0143O06.1 132613 97042 106622 8 149,71,84,45,50,48,51,119, 0,149,221,305,350,401,449,500, 97042,100280,100593,100801,100946,103488,104779,106503, 422 5 0 0 0 0 1 1 - SGN-U335889 427 0 427 C11HBa0143O06.1 132613 126455 126883 2 332,95, 0,332, 126455,126788, 35 3 0 0 0 0 0 0 + SGN-U336859 556 464 502 C11HBa0143O06.1 132613 38972 39010 1 38, 464, 38972, 558 1 0 0 0 0 4 2075 + SGN-U337008 567 0 559 C11HBa0143O06.1 132613 75058 77692 5 80,60,153,47,219, 0,80,140,293,340, 75058,75735,77086,77324,77473, 48 2 0 0 1 44 1 281 + SGN-U338877 754 614 708 C11HBa0143O06.1 132613 38972 39303 2 36,14, 614,694, 38972,39289, 54 1 0 0 0 0 0 0 + SGN-U339973 458 6 61 C11HBa0143O06.1 132613 93734 93789 1 55, 6, 93734, 593 1 0 0 0 0 0 0 + SGN-U340588 594 0 594 C11HBa0143O06.1 132613 26776 27370 1 594, 0, 26776, 146 7 0 0 2 16 2 16 + SGN-U344868 754 186 355 C11HBa0143O06.1 132613 99860 100029 3 9,30,114, 186,196,241, 99860,99871,99915, 516 0 0 0 1 1 0 0 + SGN-U344918 517 0 517 C11HBa0143O06.1 132613 49217 49733 2 510,6, 0,511, 49217,49727, 457 7 0 0 0 0 4 1687 - SGN-U346222 464 0 464 C11HBa0143O06.1 132613 82917 85068 5 60,72,95,79,158, 0,60,132,227,306, 82917,83064,83712,84531,84910, 53 0 0 0 0 0 3 24671 + SGN-U346579 368 22 75 C11HBa0143O06.1 132613 14582 39306 4 17,12,9,15, 22,39,51,60, 14582,29350,29741,39291, 765 2 0 0 0 0 2 830 + SGN-U346942 767 0 767 C11HBa0143O06.1 132613 87758 89355 3 190,562,15, 0,190,752, 87758,88777,89340, 60 1 0 0 0 0 0 0 - SGN-U347004 754 411 472 C11HBa0143O06.1 132613 28799 28860 1 61, 282, 28799,