psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 1498 20 0 0 3 16 3 2211 + SGN-U312398 1559 0 1534 C11HBa0245M17.2 137646 46117 49846 7 60,19,511,372,385,16,155, 0,70,89,600,972,1361,1379, 46117,46177,47931,48559,49290,49675,49691, 1659 32 0 0 1 10 5 2213 + SGN-U312399 1704 0 1701 C11HBa0245M17.2 137646 45996 49900 7 153,27,19,511,372,401,208, 0,153,190,209,720,1092,1493, 45996,46150,46177,47931,48559,49290,49692, 278 21 0 0 1 5 2 21 - SGN-U313322 661 357 661 C11HBa0245M17.2 137646 99215 99535 3 170,25,104, 0,175,200, 99215,99405,99431, 354 22 0 0 3 19 4 49 + SGN-U313328 1289 488 883 C11HBa0245M17.2 137646 99115 99540 5 9,18,24,216,109, 488,507,530,554,774, 99115,99130,99162,99214,99431, 101 2 0 0 1 46 2 25 - SGN-U317986 1842 1677 1826 C11HBa0245M17.2 137646 99407 99535 3 37,35,31, 16,99,134, 99407,99448,99504, 175 9 0 0 1 18 3 493 + SGN-U319504 687 294 496 C11HBa0245M17.2 137646 11260 11937 4 95,69,5,15, 294,389,476,481, 11260,11356,11916,11922, 83 6 0 0 0 0 0 0 - SGN-U322488 1584 1491 1580 C11HBa0245M17.2 137646 99448 99537 1 89, 4, 99448, 1183 6 0 0 0 0 0 0 + SGN-U323867 1189 0 1189 C11HBa0245M17.2 137646 116449 117638 1 1189, 0, 116449, 50 4 0 0 0 0 0 0 - SGN-U326522 1140 1086 1140 C11HBa0245M17.2 137646 120326 120380 1 54, 0, 120326, 55 1 0 0 1 1 0 0 + SGN-U329159 453 375 432 C11HBa0245M17.2 137646 99130 99186 2 52,4, 375,428, 99130,99182, 780 12 0 0 0 0 3 1379 - SGN-U331425 792 0 792 C11HBa0245M17.2 137646 129397 131568 4 350,165,95,182, 0,350,515,610, 129397,129854,130092,131386, 650 0 0 0 0 0 2 4230 + SGN-U331824 650 0 650 C11HBa0245M17.2 137646 104056 108936 3 81,185,384, 0,81,266, 104056,107720,108552, 46 2 0 0 0 0 0 0 + SGN-U333249 377 311 359 C11HBa0245M17.2 137646 99129 99177 1 48, 311, 99129, 289 11 0 0 0 0 0 0 + SGN-U333526 359 59 359 C11HBa0245M17.2 137646 47929 48229 1 300, 59, 47929, 790 19 0 2 1 1 1 3 + SGN-U333528 861 49 861 C11HBa0245M17.2 137646 47929 48743 3 581,225,5, 49,630,856, 47929,48513,48738, 471 6 0 0 1 1 2 361 + SGN-U333529 735 0 478 C11HBa0245M17.2 137646 48897 49735 3 34,409,34, 0,34,444, 48897,49290,49701, 236 20 0 0 0 0 0 0 + SGN-U334276 506 250 506 C11HBa0245M17.2 137646 99129 99385 1 256, 250, 99129, 100 3 0 0 0 0 0 0 - SGN-U334277 387 284 387 C11HBa0245M17.2 137646 99432 99535 1 103, 0, 99432, 707 3 0 76 0 0 0 0 + SGN-U340447 786 0 786 C11HBa0245M17.2 137646 102257 103043 1 786, 0, 102257, 416 27 0 0 4 9 7 25351 - SGN-U341297 458 0 452 C11HBa0245M17.2 137646 11521 37315 10 35,66,62,45,17,35,12,31,43,97, 6,41,107,174,219,237,274,286,317,361, 11521,11558,11761,11827,12007,12024,12060,12137,37175,37218, 33 2 0 0 0 0 0 0 + SGN-U341600 558 215 250 C11HBa0245M17.2 137646 123299 123334 1 35, 215, 123299, 219 3 0 0 3 4 2 6 - SGN-U344571 787 9 235 C11HBa0245M17.2 137646 58848 59076 4 193,16,7,6, 552,746,763,772, 58848,59041,59059,59070, 219 3 0 0 3 4 2 6 - SGN-U344571 787 9 235 C11HBa0245M17.2 137646 53991 54219 4 196,13,7,6, 552,749,763,772, 53991,54187,54202,54213, 58 0 0 0 0 0 1 99 + SGN-U345977 514 0 58 C11HBa0245M17.2 137646 99380 99537 2 6,52, 0,6, 99380,99485, 383 25 0 0 2 2 1 1 + SGN-U346265 547 0 410 C11HBa0245M17.2 137646 46241 46650 4 15,121,101,171, 0,16,138,239, 46241,46256,46377,46479,