psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 344 0 0 0 0 0 1 330 + SGN-U313733 515 10 354 C11HBa0303G16.1 144100 110399 111073 2 115,229, 10,125, 110399,110844, 362 0 0 0 0 0 1 330 + SGN-U313734 805 94 456 C11HBa0303G16.1 144100 110381 111073 2 133,229, 94,227, 110381,110844, 33 0 0 0 1 1 0 0 + SGN-U314851 1810 1772 1806 C11HBa0303G16.1 144100 57224 57257 2 21,12, 1772,1794, 57224,57245, 1163 3 0 0 0 0 9 5348 + SGN-U317264 1179 0 1166 C11HBa0303G16.1 144100 89967 96481 10 131,49,92,152,47,34,167,97,391,6, 0,131,180,272,424,471,505,672,769,1160, 89967,91301,94357,94555,94829,94975,95268,95887,96083,96475, 1613 0 0 0 0 0 11 5329 + SGN-U318395 1667 20 1633 C11HBa0303G16.1 144100 15199 22141 12 104,67,93,165,141,78,113,61,168,102,90,431, 20,124,191,284,449,590,668,781,842,1010,1112,1202, 15199,15990,17183,17355,17608,17845,18836,19027,20115,21118,21450,21710, 1733 0 0 0 0 0 9 8040 - SGN-U318433 1741 0 1733 C11HBa0303G16.1 144100 29190 38963 10 429,109,94,64,113,127,150,97,230,320, 8,437,546,640,704,817,944,1094,1191,1421, 29190,30915,31116,31298,31452,32293,32530,34930,37377,38643, 599 0 0 0 0 0 3 4782 - SGN-U318536 620 0 599 C11HBa0303G16.1 144100 111698 117079 4 396,39,125,39, 21,417,456,581, 111698,112791,113339,117040, 31 1 0 0 0 0 0 0 - SGN-U318601 793 569 601 C11HBa0303G16.1 144100 99227 99259 1 32, 192, 99227, 472 0 0 0 0 0 1 1609 + SGN-U318744 573 1 473 C11HBa0303G16.1 144100 129723 131804 2 40,432, 1,41, 129723,131372, 33 1 0 0 0 0 0 0 - SGN-U319540 1535 119 153 C11HBa0303G16.1 144100 58971 59005 1 34, 1382, 58971, 2081 1 0 1 0 0 9 5779 + SGN-U320617 2100 0 2083 C11HBa0303G16.1 144100 121087 128949 10 183,146,155,82,116,99,124,278,215,685, 0,183,329,484,566,682,781,905,1183,1398, 121087,121512,121735,123282,123450,125011,125707,126383,127956,128264, 673 1 0 0 1 1 2 12 + SGN-U323678 687 0 675 C11HBa0303G16.1 144100 86232 86918 3 593,53,28, 0,593,647, 86232,86835,86890, 85 0 0 0 0 0 1 777 + SGN-U323853 669 0 85 C11HBa0303G16.1 144100 142898 143760 2 37,48, 0,37, 142898,143712, 777 0 0 0 0 0 1 469 + SGN-U324064 836 45 822 C11HBa0303G16.1 144100 48180 49426 2 28,749, 45,73, 48180,48677, 1025 2 0 0 2 2 9 4932 + SGN-U324768 1209 180 1209 C11HBa0303G16.1 144100 4114 10073 12 37,167,105,57,81,35,90,157,187,35,58,18, 180,217,384,489,546,627,662,752,909,1096,1132,1191, 4114,4700,4955,5161,5915,6460,6766,6952,7257,9962,9997,10055, 142 2 0 0 0 0 0 0 - SGN-U324769 520 226 370 C11HBa0303G16.1 144100 85011 85155 1 144, 150, 85011, 971 1 0 2 0 0 7 5749 - SGN-U324863 999 0 974 C11HBa0303G16.1 144100 64142 70865 8 58,64,133,78,170,208,67,196, 25,83,147,280,358,528,736,803, 64142,64989,65155,66159,66749,68581,68987,70669, 1132 1 0 0 0 0 2 1460 + SGN-U325622 1152 0 1133 C11HBa0303G16.1 144100 57252 59845 3 207,290,636, 0,207,497, 57252,58207,59209, 77 2 0 0 2 8 2 12 + SGN-U325738 1247 1135 1222 C11HBa0303G16.1 144100 87419 87510 3 51,22,6, 1135,1192,1216, 87419,87478,87504, 36 0 0 0 0 0 0 0 - SGN-U327794 874 653 689 C11HBa0303G16.1 144100 58975 59011 1 36, 185, 58975, 38 0 0 0 0 0 1 2 + SGN-U328123 633 552 590 C11HBa0303G16.1 144100 24463 24503 2 31,7, 552,583, 24463,24496, 33 1 0 0 0 0 0 0 - SGN-U328123 633 553 587 C11HBa0303G16.1 144100 126736 126770 1 34, 46, 126736, 1419 0 0 0 0 0 4 3793 - SGN-U329710 1442 0 1419 C11HBa0303G16.1 144100 101688 106900 5 825,231,120,121,122, 23,848,1079,1199,1320, 101688,102866,104456,104694,106778, 682 0 0 0 0 0 2 2391 - SGN-U330112 690 0 682 C11HBa0303G16.1 144100 132337 135410 3 340,119,223, 8,348,467, 132337,134008,135187, 1169 4 0 0 0 0 5 811 - SGN-U330646 1173 0 1173 C11HBa0303G16.1 144100 22461 24445 6 260,175,66,146,79,447, 0,260,435,501,647,726, 22461,22878,23150,23425,23690,23998, 77 3 0 0 0 0 0 0 - SGN-U331449 567 487 567 C11HBa0303G16.1 144100 85075 85155 1 80, 0, 85075, 664 0 0 0 2 2 0 0 - SGN-U331637 666 0 666 C11HBa0303G16.1 144100 106930 107594 3 15,86,563, 0,16,103, 106930,106945,107031, 741 4 0 3 2 6 6 1977 + SGN-U332709 754 0 754 C11HBa0303G16.1 144100 118480 121205 8 346,60,54,173,48,5,52,10, 0,346,406,460,633,682,687,744, 118480,119028,120645,120788,121083,121131,121137,121195, 37 0 0 0 1 3 1 2 + SGN-U334251 657 252 292 C11HBa0303G16.1 144100 24463 24502 2 31,6, 252,286, 24463,24496, 34 0 0 0 1 3 0 0 - SGN-U334251 657 253 290 C11HBa0303G16.1 144100 126736 126770 2 5,29, 367,375, 126736,126741, 38 0 0 0 1 1 1 1 - SGN-U334543 627 448 487 C11HBa0303G16.1 144100 58972 59011 3 27,5,6, 140,167,173, 58972,59000,59005, 266 6 0 0 1 1 1 331 - SGN-U334572 602 31 304 C11HBa0303G16.1 144100 110470 111073 2 45,227, 298,344, 110470,110846, 32 0 0 0 0 0 0 0 + SGN-U337093 539 91 123 C11HBa0303G16.1 144100 58979 59011 1 32, 91, 58979, 35 0 0 0 0 0 0 0 - SGN-U337964 662 374 409 C11HBa0303G16.1 144100 58975 59010 1 35, 253, 58975, 140 6 0 0 0 0 0 0 - SGN-U338085 489 303 449 C11HBa0303G16.1 144100 85009 85155 1 146, 40, 85009, 449 15 0 0 2 2 0 0 + SGN-U339842 477 0 466 C11HBa0303G16.1 144100 54084 54548 3 94,79,291, 0,95,175, 54084,54178,54257, 128 4 0 0 3 177 3 301 + SGN-U339842 477 0 309 C11HBa0303G16.1 144100 53616 54049 4 38,55,17,22, 0,39,257,287, 53616,53676,53907,54027, 108 5 0 0 2 164 3 852 + SGN-U339842 477 39 316 C11HBa0303G16.1 144100 53028 53993 4 55,9,31,18, 39,95,104,298, 53028,53524,53656,53975, 53 0 0 0 1 224 1 3 + SGN-U339842 477 39 316 C11HBa0303G16.1 144100 52662 52718 2 30,23, 39,293, 52662,52695, 308 15 0 0 0 0 1 108 + SGN-U339843 382 0 323 C11HBa0303G16.1 144100 54265 54696 2 9,314, 0,9, 54265,54382, 32 0 0 0 0 0 0 0 - SGN-U340175 540 135 167 C11HBa0303G16.1 144100 74790 74822 1 32, 373, 74790, 34 0 0 0 1 1 0 0 - SGN-U342192 493 415 450 C11HBa0303G16.1 144100 74790 74824 2 29,5, 43,73, 74790,74819, 489 0 0 0 0 0 0 0 - SGN-U343765 507 0 489 C11HBa0303G16.1 144100 51590 52079 1 489, 18, 51590, 784 2 0 0 0 0 1 605 - SGN-U344224 786 0 786 C11HBa0303G16.1 144100 26821 28212 2 674,112, 0,674, 26821,28100, 157 10 0 0 1 1 1 1 - SGN-U344226 460 74 242 C11HBa0303G16.1 144100 138336 138504 3 67,23,77, 218,285,309, 138336,138404,138427, 36 0 0 1 0 0 0 0 - SGN-U344400 536 490 527 C11HBa0303G16.1 144100 58972 59009 1 37, 9, 58972, 526 0 0 0 0 0 2 2076 + SGN-U344422 526 0 526 C11HBa0303G16.1 144100 43814 46416 3 136,304,86, 0,136,440, 43814,44426,46330, 324 13 0 0 1 1 1 462 - SGN-U345130 338 0 338 C11HBa0303G16.1 144100 27497 28296 3 141,112,84, 0,141,254, 27497,28100,28212, 234 0 0 0 0 0 0 0 + SGN-U346610 234 0 234 C11HBa0303G16.1 144100 40050 40284 1 234, 0, 40050,