<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-18 02:33:35"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C11HBa0064J13-MXKeo/GenomeThreader_SGN_markers/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C11HBa0064J13-MXKeo/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C11HBa0064J13-MXKeo/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M2965" ref_strand="+" ref_description="SGN-M2965 cLEB-7-L1 [est_clones]">
      <seq>gcacgagcggcgacgaacaacaatctcactgagagaatcactccggcgaccgactacaaacaacgatgaggccaatattgatgaagggccatgaaaggccgttaacttttctaaagtacaacagagatggagatctgctcttctcttgcgctaaggaccatacccctaccgtttggtttgccgataacggcgagcgcctcggcacttaccgtggccataacggtgccgtttggtgctgtgacgtttctcgggattcgtccaggctaataactggaagtgcggatcagactgcaatgttgtgggatgtccaaactggtgcccagctgcacacgttcacctttgactcccctgctaggtctgttgatttttcagttggcgataaactcgcagtgatcaccactgatccttttatgggactgacatctgctatccatatcaaaaatatcagcaaagatcccagtgaacaaatgagtgagtcggtgctcgtcttaaagggtccccagggaagaatcaacagagctgtgtggggacccctgaataaaacaattataagtgctggtgaagatgctgtaatacgtatctgggatgctgagactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0064J13-MXKeo/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C11HBa0064J13.2" temp_strand="-" temp_description="C11HBa0064J13.2  AC171734.2 htgs_phase:3 submitted_to_sgn_as:082905.asm.C18 sequenced_by:ivf-caas upload_account_name:china11 082905.asm.assem.ace.1 from 3 to 118523">
        <position start="13001" stop="9011"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12707" g_stop="12460" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="249" r_length="249" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12459" i_stop="11369" i_length="1091">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11368" g_stop="11153" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="465" r_length="216" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11152" i_stop="9439" i_length="1714">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="9438" g_stop="9311" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="466" r_stop="593" r_length="128" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0064J13.2" gen_strand="-" ref_id="SGN-M2965" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>592</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0064J13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-M2965" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12707" e_stop="12460"/>
          <exon e_start="11368" e_stop="11153"/>
          <exon e_start="9438" e_stop="9311"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAC-TCCGGCGACGAACAACAATCTCACTGAGAGAATCACTCCGGCGACCGACTACAAACAACGATGAGGCCAATATTGATGAAGGGCCATGAAAGGCCGTTAACTTTTCTAAAGTACAACAGAGATGGAGATCTGCTCTTCTCTTGCGCTAAGGACCATACCCCTACCGTTTGGTTTGCCGATAACGGCGAGCGCCTCGGCACTTACCGTGGCCATAACGGTGCCGTTTGGTGCTGTGACGTTTCTCGTAACTACTTCTTCTTCTCTCATACTATTGATATACTGAACTGAGCTGATATTTGTTATTAACACGATGAATGCTTGCCGTTTTTGTTTGTTTATTAGCCTACAGTGAAGCTTTGCTTACTTAAATAAGCTAATTTTCGGATAATTAATCTTCGTCTCTAGGGCTTTTGGTGTAGTAATAGTAATAAGAGTAATGGTGCGGATTTGGTGCACTTTCCGAACGAAATTCGAAGAATTTGAATCGATTAATTGCCTAGTCTATGGCTAAAGTTTGAGGCTACAAGTAACATCTCAAGATTCTATTTCAGTTACTGCTGTTTGCACCTGGATAAAAGTATCTAATCAAATTTGTAGACAATTGTTGATTAAAATCCCCAACACAACATACCTATTATAGTCCAACAAGTTGATTATCTAGTTATTTAACCATGATTTTGTTCATGATCAGTAAGTTCTTTTTAAATCAGGTGAAATAAACGAAGAGCATTAACGGCTATTCTGGTTTGATGGTTGACCTGCTTGTAAAAGAAACTGATATGGTTGCAGTTTTGCTATCACATGTTTAATTTACCTCTAGCTAATATTGTTTGTCATACTGATTTGCTATAAAACAAATCACTGATTTTTCAGATGAACTTGGTTGTTTTGATGGGTTAAATTTGTGAAGGATGATTTTTCATCCTCTATCTTGTACTTATTTCGTTACCCAAATAGTCTTTTGCTTAAAAATTGTAGAACTTTCATTCACAATCTTCTTACTACTCCCCTTTCTTTCTCTTCATATTTCATCAATCTATGTTATTGGAATTTCTGTTGTTCTCTTTATGTATTATGTCCACTTTGGCTAGTGAAAATTGGATGTAGTAAAGTAGTTATATCTCATTGGTCTTGTTTTTACCTTACAAGGGCTTTGAGGTCCAATACTTGCTGGCATGTTTCTTTTTTCTAAATAAAAGTTTAATGAAAACTGGTAGTCACAGTACGAGAGACCAAGTGCTTTTTTTTTTTGTTCGTATCATGTATGGTAAAGTGTATAATACTATTGAGAAATGGACTGTCTGTGGTTGTTGACTTGTTGATTGTTTGTTAAAGGGGATTCGTCCAGGCTAATAACTGGAAGTGCGGATCAGACTGCAATGTTGTGGGATGTCCAAACTGGTGCCCAGCTGCACACGTTCACCTTTGACTCCCCTGCTAGGTCTGTTGATTTTTCAGTTGGCGATAAACTCGCAGTGATCACCACTGATCCTTTTATGGGACTGACATCTGCTATCCATATCAAAAATATCAGCAAAGATCCCAGTGAACGTAAGTTTCTGGAACTCTAAGGTTGATCTTCTGTTGTGTTGTCTTGTTTAATTGTTGTTTTTTAACAATTAATTGTTGGGTTGTATTTCTGTTTGTGAAGTAAATATTGCCTTTGTGTACTCTTTCCTTTTAAATTGCGAACAATGAATTGGATTATTGTGAAAGCATCAAATAAGTTCCTTTTATGAGCTTTCAAGTATCTTGTGACAAGCTTCATGTCTCCAGTGTAGCTATTCTTAAGCCCACTGTGTTTCCTTTTCAGAGATGTGAATATTGGACTCTTTATGACCTCAAGTCAGAGCTATACAGATGCATTTTATTTGATTATGATCATATTAGCACATAGTTGGTTTTTAAATGACTTGGATATATCGTGAATTAATTTCTCAAGCTACCAATAAAGTAGCTATGATGGTTTTGCTGTATTCTTAATTAGTTATATTATGATTTGCTATGATTGACAATTTGACATCATTTATCAGATGTTTGTCTGTTCTGTCTTTGTGCTGATATTTTAGTTGTTGAGGCCGTTCCTGGTATGTCTGTGGTGGTTAGTATCATTGAAGAAACCTGTCATTTAAATATCAGCATATGAATAATTGTCTAAATATGTGGAGTGAAGGGACTGTTTCTTTGCATTCCGACTTACCAACTCAGGCCACCCAATTGTATATATGTCTGCACTGGCCCATGTTTTCAAACTGATCAGAATGGATCCCTCCTGGTACTGATCCTCCATCGGTAATAACAATACCCAACTTCCATGCTGGCACCTATGCTATCCACCAACACTTGCCAAAACCAACATTCATGCAGAAACCCAACATATAATTTACTCTCTATGATAAGTACTACAACCAGAATAGTGGAGCAAAACCATGTCCTGTCACTAGGAGTGTTCATGTTTATCAAGTTCGGAACTCCTCTATCACCGGCCACTTAGCATGATGCACTTGGGTATGTAAAGTGAATTTGTTTATGCATGTTGTAAGTTAACAGGCGACAGCTTACTCCCTAACTTCACCACAAAGGAGCTTAAAGGAACCAGTCCTGTTACAATCACATGTCCTTTAACTATAGAGTTACTAGTGCTACTTCTGAGTTAATTGATAATTCACTTTGATATGGAGCTTGGTTATGGGGTCTGGCGGCGAAGCAGATGATTTCTATCCCCCCCCCCCCCCCACTCTTTTTAAGTTCAGTTACCAAAGAAAAAATTGTTGTAGTCATATTATACTTCCCCTTTTGTTTCCTTTAAAGTCACATATCGTTAATAATTATCTTATTACTTTATCCATTATCCTTAATTCTATGTAAACCAGAACTTGAGTATTGGAAAAAAATGTACTGTAGACTATATCAAAAAGCAAAGATGACCACCATTAAAAACATGTAGGATTTATGTGCAGAAAATGGAAGGGTCTTGCTTTCTGTTCAATTATACAAGATTGGTAAAGGTATATAGCTTTAGGGAATATTTGTTGTCAAGAGTTAAGCCTAATATGTTTCCAGAGTTGTCACATCTAACACATTGAATATGCTTTGGAATTTGAGACGAAGGTATATGCCTTGTATAGTTTGTTATTGCTTCTCTGGTGGTTGCTGTCTTATACTAATTTCAAACGAGCCTATCTTCCATTATTTTGGGCACTTTCTGACTCTCATCTCATGATCTTGACATTCACTGTATCTAATAATAATCTTCTTATTTTAGAAATGAGTGAGTCGGTGCTCGTCTTAAAGGGTCCCCAGGGAAGAATCAACAGAGCTGTGTGGGGACCCCTGAATAAAACAATTATAAGTGCTGGTGAAGATGCTGTAATACGTATCTGGGATGCTGAG</genome_strand>
        <mrna_strand>GCACGAGCGGCGACGAACAACAATCTCACTGAGAGAATCACTCCGGCGACCGACTACAAACAACGATGAGGCCAATATTGATGAAGGGCCATGAAAGGCCGTTAACTTTTCTAAAGTACAACAGAGATGGAGATCTGCTCTTCTCTTGCGCTAAGGACCATACCCCTACCGTTTGGTTTGCCGATAACGGCGAGCGCCTCGGCACTTACCGTGGCCATAACGGTGCCGTTTGGTGCTGTGACGTTTCTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGATTCGTCCAGGCTAATAACTGGAAGTGCGGATCAGACTGCAATGTTGTGGGATGTCCAAACTGGTGCCCAGCTGCACACGTTCACCTTTGACTCCCCTGCTAGGTCTGTTGATTTTTCAGTTGGCGATAAACTCGCAGTGATCACCACTGATCCTTTTATGGGACTGACATCTGCTATCCATATCAAAAATATCAGCAAAGATCCCAGTGAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGAGTGAGTCGGTGCTCGTCTTAAAGGGTCCCCAGGGAAGAATCAACAGAGCTGTGTGGGGACCCCTGAATAAAACAATTATAAGTGCTGGTGAAGATGCTGTAATACGTATCTGGGATGCTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>1</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="12707" PGL_stop="9311"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="12707" e_stop="12460"/>
            <exon e_start="11368" e_stop="11153"/>
            <exon e_start="9438" e_stop="9311"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.967" acc_prob="0.998" e_score="0.976"/>
          <exon-intron don_prob="0.998" acc_prob="0.964" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.976">
            <gDNA_exon_boundary e_start="12707" e_stop="12460" e_length="248"/>
          </exon>
          <intron i_serial="1" don_prob="0.967" acc_prob="0.998">
            <gDNA_intron_boundary i_start="12459" i_stop="11369" i_length="1091"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="11368" e_stop="11153" e_length="216"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.964">
            <gDNA_intron_boundary i_start="11152" i_stop="9439" i_length="1714"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="9438" e_stop="9311" e_length="128"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12707" stop="12460"/>
              <exon start="11368" stop="11153"/>
              <exon start="9438" stop="9311"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M2965" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTACTCCGGCGACGAACAACAATCTCACTGAGAGAATCACTCCGGCGACCGACTACAAACAACGATGAGGCCAATATTGATGAAGGGCCATGAAAGGCCGTTAACTTTTCTAAAGTACAACAGAGATGGAGATCTGCTCTTCTCTTGCGCTAAGGACCATACCCCTACCGTTTGGTTTGCCGATAACGGCGAGCGCCTCGGCACTTACCGTGGCCATAACGGTGCCGTTTGGTGCTGTGACGTTTCTC : GGGATTCGTCCAGGCTAATAACTGGAAGTGCGGATCAGACTGCAATGTTGTGGGATGTCCAAACTGGTGCCCAGCTGCACACGTTCACCTTTGACTCCCCTGCTAGGTCTGTTGATTTTTCAGTTGGCGATAAACTCGCAGTGATCACCACTGATCCTTTTATGGGACTGACATCTGCTATCCATATCAAAAATATCAGCAAAGATCCCAGTGAAC : AAATGAGTGAGTCGGTGCTCGTCTTAAAGGGTCCCCAGGGAAGAATCAACAGAGCTGTGTGGGGACCCCTGAATAAAACAATTATAAGTGCTGGTGAAGATGCTGTAATACGTATCTGGGATGCTGAG</gDNA_template>
            <first_frame> L  L  R  R  R  T  T  I  S  L  R  E  S  L  R  R  P  T  T  N  N  D  E  A  N  I  D  E  G  P  *  K  A  V  N  F  S  K  V  Q  Q  R  W  R  S  A  L  L  L  R  *  G  P  Y  P  Y  R  L  V  C  R  *  R  R  A  P  R  H  L  P  W  P  *  R  C  R  L  V  L  *  R  F  S :   G  F  V  Q  A  N  N  W  K  C  G  S  D  C  N  V  V  G  C  P  N  W  C  P  A  A  H  V  H  L  *  L  P  C  *  V  C  *  F  F  S  W  R  *  T  R  S  D  H  H  *  S  F  Y  G  T  D  I  C  Y  P  Y  Q  K  Y  Q  Q  R  S  Q  *  T :   N  E  *  V  G  A  R  L  K  G  S  P  G  K  N  Q  Q  S  C  V  G  T  P  E  *  N  N  Y  K  C  W  *  R  C  C  N  T  Y  L  G  C  *  </first_frame>
            <second_frame>  Y  S  G  D  E  Q  Q  S  H  *  E  N  H  S  G  D  R  L  Q  T  T  M  R  P  I  L  M  K  G  H  E  R  P  L  T  F  L  K  Y  N  R  D  G  D  L  L  F  S  C  A  K  D  H  T  P  T  V  W  F  A  D  N  G  E  R  L  G  T  Y  R  G  H  N  G  A  V  W  C  C  D  V  S   : R  D  S  S  R  L  I  T  G  S  A  D  Q  T  A  M  L  W  D  V  Q  T  G  A  Q  L  H  T  F  T  F  D  S  P  A  R  S  V  D  F  S  V  G  D  K  L  A  V  I  T  T  D  P  F  M  G  L  T  S  A  I  H  I  K  N  I  S  K  D  P  S  E   : Q  M  S  E  S  V  L  V  L  K  G  P  Q  G  R  I  N  R  A  V  W  G  P  L  N  K  T  I  I  S  A  G  E  D  A  V  I  R  I  W  D  A  E </second_frame>
            <third_frame>   T  P  A  T  N  N  N  L  T  E  R  I  T  P  A  T  D  Y  K  Q  R  *  G  Q  Y  *  *  R  A  M  K  G  R  *  L  F  *  S  T  T  E  M  E  I  C  S  S  L  A  L  R  T  I  P  L  P  F  G  L  P  I  T  A  S  A  S  A  L  T  V  A  I  T  V  P  F  G  A  V  T  F  L  :  G  I  R  P  G  *  *  L  E  V  R  I  R  L  Q  C  C  G  M  S  K  L  V  P  S  C  T  R  S  P  L  T  P  L  L  G  L  L  I  F  Q  L  A  I  N  S  Q  *  S  P  L  I  L  L  W  D  *  H  L  L  S  I  S  K  I  S  A  K  I  P  V  N  :  K  *  V  S  R  C  S  S  *  R  V  P  R  E  E  S  T  E  L  C  G  D  P  *  I  K  Q  L  *  V  L  V  K  M  L  *  Y  V  S  G  M  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0064J13.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="12676" stop="12460"/>
                    <exon start="11368" stop="11153"/>
                    <exon start="9438" stop="9311"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>561</number_coding_nucleotides>
                  <number_encoded_amino_acids>187</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ENHSGDRLQTTMRPILMKGHERPLTFLKYNRDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAMLWDVQTGAQLHTFTFDSPARSVDFSVGDKLAVITTDPFMGLTSAIHIKNISKDPSEQMSESVLVLKGPQGRINRAVWGPLNKTIISAGEDAVIRIWDAE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 2 chains have been computed
$ 
$ memory statistics:
$ 1768 bytes spliced alignments in total
$ 1 spliced alignments have been stored
$ 1768 bytes was the average size of a spliced alignment
$ 5592 bytes predicted gene locations in total
$ 1 predicted gene locations have been stored
$ 5592 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 2 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-18 02:33:40
-->
