<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-18 05:47:36"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U321365" ref_strand="+" ref_description="SGN-U321365        Tomato 200607 #1 [9 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr2:12258862-12261900 FORWARD | Aliases: T8O18.11, T8O18_11(evalue: 8e-70, score=261) genbank/nr: gi|20259502|gb|AAM13871.1| putative ATP-dependent RNA helicase [Arabidopsis thaliana](evalue: 6e-68, score=261)">
      <seq>gaagagaaaagcgccactacacaaaactgcaaaaaccgcctctttcacttgaacaacagcagcagcagcagcagcagctatggggaaaagcgatgattccattcagagaaggaagaataagaagagtagaaagaagcaagatgacaaggtatctaatcgtatcgctggaatcattgctgctaagaaacgtcgactctccggcaaacgccgtatgtgtgagggaatgtgctatagtttacctacacctgaggatccattcaatgagaggcatggaaaagttgatcctgtaaagaagaagaagaagaagcagaaccagtcgaaaaagggcaagaaccctattaagaagaccggtttaccacaaaattctgacaaattaaaggaagagttccacatgcatgctccatctaagttcttaattctctgtttgaaaaacattcaggatgaccttcagcaggatggagccttcagtggtagagaggaaaagcctttcttcatccatacatggggaattgaattctggaaatattttaccagtggcaaagatattattggtacaaatcaagcccatgctacaactgagcaaattgcttgggttgcagcaacaactgctgatgccatatcaagaaaggagaaagaaggtctatcaattagcaacccctaccttttattccttgttccctcccaagagaaagctgtcaaggtgcggaaaatatgcaagcctctgaaagctcttggaatacatacagtgagtctgcatcctggtgcttctatagaccaccagattcagggcctgaagaactgtgagcccgaatttcttatttctactcctgaaagacttcaagaactcctctcacatggtgccattaaaacttctgatgtttctttcctggtcatcgatggacctctttctgagacaggttatgttgatgcggttgaatccattgcaaaatctatttctggaaagccacaaatactggctttcaatgattgctcaaattcttcatccaattttcttatgaagaagagtgttggagaatcaatctgtagaataccgcttgatgatccagtaaatgatcataacatggcttgagatatttgtgcttctaagttgtcaatgacaaacgcgacatgctgtccttgcagttgatttgccttatcatcgttacagatcctctggcgtcattcaacttaatagaagaaagttctgtaattgtaaacttcttccatatcaccggtgcagctacgtgctgctacttttcacattgtctgcaaaattctttgttatacagtagatgtattcgagatatcttagataaaaggttctcaatgttgtgttaggagaggaagttaattgtaaccccatatggtctgttgtgttctgggaatagcccaactggataattgcaggagatgcatataaccccttttttactatttgaaaaaaaaaaaaaaaaaaaaaactcgagactagttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0143O06.1" temp_strand="-" temp_description="C11HBa0143O06.1  AC220058.1 htgs_phase:3 submitted_to_sgn_as:gi|170933588|gb|AC220058.1| sequenced_by:ivf-caas upload_account_name:china11 Solanum lycopersicum chromosome 11 clone C11HBa0143O06, complete sequence">
        <position start="10455" stop="4529"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10155" g_stop="9936" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="220" r_length="220" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9935" i_stop="9157" i_length="779">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9156" g_stop="8677" g_length="480"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="700" r_length="480" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="8676" i_stop="8253" i_length="424">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8252" g_stop="8164" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="701" r_stop="789" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="8163" i_stop="7834" i_length="330">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="7833" g_stop="7734" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="790" r_stop="889" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="7733" i_stop="6284" i_length="1450">
            <donor d_prob="0.927" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="6283" g_stop="6056" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="890" r_stop="1117" r_length="228" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="6055" i_stop="5153" i_length="903">
            <donor d_prob="0.834" d_score="1.00"/>
            <acceptor a_prob="0.855" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="5152" g_stop="4830" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="1118" r_stop="1440" r_length="323" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1441" polyA_stop="1461"/>
      <MATCH_line gen_id="C11HBa0143O06.1" gen_strand="-" ref_id="SGN-U321365" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1440</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0143O06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U321365" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10155" e_stop="9936"/>
          <exon e_start="9156" e_stop="8677"/>
          <exon e_start="8252" e_stop="8164"/>
          <exon e_start="7833" e_stop="7734"/>
          <exon e_start="6283" e_stop="6056"/>
          <exon e_start="5152" e_stop="4830"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGAGAAAAGCGCCACTACACAAAACTGCAAAAACCGCCTCTTTCACTTGAACAACAGCAGCAGCAGCAGCAGCAGCTATGGGGAAAAGCGATGATTCCATTCAGAGAAGGAAGAATAAGAAGAGTAGAAAGAAGCAAGATGACAAGGTATCTAATCGTATCGCTGGAATCATTGCTGCTAAGAAACGTCGACTCTCCGGCAAACGCCGTATGTGTGAGGTAAATTTCACATTATATGAACTCATTTGGTCCATTTGGGTGTTGGGTTTGTTGATTTTTATTGTGAGATTTCGTTGAGTATCTGGGTATGTTGTATTGACAAATGGGTGTCGAGAAAAGATTATGGAAGTTGTGTGTTTTGAGAAGTTTTATTTTGTAAAGCTGAAGAGAGGGATTTGAGGAAGAAAGAGGAAGATTAAGGTTTTGGTGTGTTGTAATGGTGTTTTGAGGAACTGGGTATTCGTTATTTGTATGCAAAAGTAGTGTTTTGAGTAGCTTTTTTTTGTGAAGCTGTTAATGGTAAAAGGTGGAAGATTTTCGTTTTGGTATATTCAAATGGAGTTTTAAGGAATTGGGTATTCTTTATTTGTTTTCAAAATTAGTGTCTTGAGTAGTTCTTTTTTGTGAAGTTGTCAAATGTGAGGAAAGTTATTGTTTTCTTTGTTGCGTAGGAATTGAGAAATGTTTTGGAATTCATTTACTTAGTATGATCTTGTTGGTGGTGTATCTTTATGGAAGTGCATTTGTTTGATTATTGAATACTCCATGTCTTATTCATTCATGTATGCTCATACCAGTTACCATCGAAGTTTTGCACTTCTTTTTTCGTCATGTGAAACTGCCAAGAGGAAAATGCAGGACTTAGATTAAGTGGTATTGGAATGGATCTATACATTTATATATATATATGACTCCTATATTAATTTGTCGCAACCAGCCTAATGGGGCTAATTTGCGTTGTGTTAATTTTGCTGTTTTTTCTTACCTTCCATCGACAGGGAATGTGCTATAGTTTACCTACACCTGAGGATCCATTCAATGAGAGGCATGGAAAAGTTGATCCTGTAAAGAAGAAGAAGAAGAAGCAGAACCAGTCGAAAAAGGGCAAGAACCCTATTAAGAAGACCGGTTTACCACAAAATTCTGACAAATTAAAGGAAGAGTTCCACATGCATGCTCCATCTAAGTTCTTAATTCTCTGTTTGAAAAACATTCAGGATGACCTTCAGCAGGATGGAGCCTTCAGTGGTAGAGAGGAAAAGCCTTTCTTCATCCATACATGGGGAATTGAATTCTGGAAATATTTTACCAGTGGCAAAGATATTATTGGTACAAATCAAGCCCATGCTACAACTGAGCAAATTGCTTGGGTTGCAGCAACAACTGCTGATGCCATATCAAGAAAGGAGAAAGAAGGTCTATCAATTAGCAACCCCTACCTTTTATTCCTTGTTCCCTCCCAAGAGAAAGCTGTCAAGGTTGGTGCAATATTCTCCAAATTTTCTCTGCTTCCATTGTTTGTAATATGTTCAACACAACATTGTGAAAGTTGTATTGATTTCTAATGGTATGGTTGCAAAATAATACGTAGCTATTTTCTTAAGCTAGTTGGACTTCTGATAGAAAGTATTTCAGCTGAAAGTCTTGATTTTTGGATAAAAGGTCCTTAGAATATCTTGTGTTGTACAGAATTTCTTTATGCATCTCCTACTTCTTTTAGTAAATTAATTAATAATCCAGAACAGTTTATCCTTCTCCGTGCATGTATTCTTCCTGTGCTTACATTATAATTTAGATAGATGTTCACTAAGCTGTAAGTTCATGTGTGAAAATTATATGGATATCTACATGTATCCTTCTACGCCTTGTGGTATCTTAATAAGCATTTCAATTGTTCATTAGGTGCGGAAAATATGCAAGCCTCTGAAAGCTCTTGGAATACATACAGTGAGTCTGCATCCTGGTGCTTCTATAGACCACCAGATTCAGGGGTATGATTCCCCTGTAACTTCTCTATAATTGAGGCTATTAGTCCTCAAAGTTGATTTATTTGTCTTTCTTGAAAGATGATAATTATTTTTTTTCAGAACCTTGACTTATTGCTAACTTTCCCTGTTTAGCATATGATTTGTTCTGTTAATAACAAGATGTAGTTATTATTATGATAGATAAATAACTTCGTGTATGTGTCATTAGCTTTCCATGTTGTATTGGCTCTAGTTGCAATTAGAAACTACTTGTGTGCTTTCCAGCCTTCTGTTTTCTTTTGAAGAAATTCACTATCTTCCCTGTTTTTATATGATTACACTTTTTGTTGACAGCCTGAAGAACTGTGAGCCCGAATTTCTTATTTCTACTCCTGAAAGACTTCAAGAACTCCTCTCACATGGTGCCATTAAAACTTCTGATGTTTCTTTCCTGGTAATTTTGATTATTTTGCATTTTGCTTATGTATTAATTTTATCTTGGATCTTTTGTCCTTCTATCACTGTTTTCGTATTTAAATAATAGGAGGGAAAGGTTGAAACTGGTTTACTGTGCTCTCTAGTTAACACAAGAAGTCCTCTTTTTTCCATTTCCACACGATTTCTAATTTAAAAAATTTTGCTTTGTTATTTTGGCAAAAGTTAGTGCCTAGCAATTTTCTTATTGTCTTCTCTGTAAGGGGAAAAAAGAGAAACAGTTTATCCTCACAATGGGGTAAGCTTCAAGAAAGCAAAAGGAATTGCAGTAACAAATTGAAATAAGAACAGGTAAGTGCAAGAACCACAAACTGGCATATAGCTAAAGTAGAACGGATCTGGATAGAAAGCAGAATTTGGATAAGGTTTTCCCTGTAAATAGCGAGACAAACTGGCACTCAAATTACGTATTGCTCTGTGGAAAACAAGTAAAGGAAAACTAATATAAGTATACAATACATATTTTCCATTTTTAGTGGGTGGAGAAAATGGAAGGTTTTGAAAGTTTTTCTAAGCGACACCAATCAGGTTTAAGGGCCTCTTTGATTTGGCGAGTCTGCCTGATTTCATTTAAGTTACATTTTCAGTTAACCACATAACTTTTTAGGTGAAAGTAATTGATATTAAATTAGTTATTCTACAATCACTTGTTTCAATAATCAGAATCAAATTTACATGCAAACCAAACAGGCTCTTCATTGGGAACTTAATATCCCTCGTGGAATATCCAGGTTAAAGGCTAGGATTATGGTGGCAGTCTCCAAATGATAGGCATAGATGTGACTCTCACAATTCCTCTTCTCCTTTCCAGTCCCTACATGATAAAATATCGAAAAACAAAAAATTTCTGTAGGTCTCTTTCTCCTCTCTCGTTTGGTTTATTTCCAATTCTATGGTTGGCATTACTCTGATTTCCTCTTTCTGTTAAACTTTGATGTTTTCTTGTTATGATCCATTCAGAGTTTTCAACATTTTCGCTTGATTTTTTTCTTTTCTAATTGTGGACAGAGCATTTGGGTCCTGCCTTGTATACTGGTTTTTTAAAAAAGTTGTATCTTGCCTTTCATGTAATGGAGCTAGCATATCTTCTTTTGTACTCTTTGCATCTTCTTGATGCCGATAATGAAACAACTTACTTCATCAAAAAAAAAAAAAGTTGAATCTTGCCTTGTAATTGAGATTATTCATTGTTATCTCTTGTGGAGAAATTTAGGATGTTATACTTTTGGCAGTTATGCCACTATCATGTATTCTCTTATTTGATTATATGGTCCAGTCAGACTGGGGTTTCGAGGTTATATTCATGATCTCTGAGATGGATATGCAAGATGTATATATGTCATTTACGTCACTAGCATCATGTGTTCCGAACCATTCAGAGATTACTCATGGTAGTCTTTGTATTTCAGGTCATCGATGGACCTCTTTCTGAGACAGGTTATGTTGATGCGGTTGAATCCATTGCAAAATCTATTTCTGGAAAGCCACAAATACTGGCTTTCAATGATTGCTCAAATTCTTCATCCAATTTTCTTATGAAGAAGAGTGTTGGAGAATCAATCTGTAGAATACCGCTTGATGATCCAGTAAATGATCATAACATGGCTTGAGATATTTGTGCTTCTAAGTTGTCAATGGTATGTCACTATCTCTGAAACGTAAATTCTGCACTTCAGATTTTAGAGTGGAATACATTAGTCAGTTAATATATAAGCTGTCGTTTTGGTTTGTTTAATTTTGCAAACACTCTTTTTACTGTGATCTTTGGGTGCAAGAAGTTATCTACTTGTAATTTCCAACTTAATGAGAATTTGGATAGTAGCAACTTTATAGTCCTCCATGCCCATCTAACTTTACAGAACTTGTGAAAAATTGAGTTTGCTCTATGTTGTTCCCAGAGCTGCCTAATTACCTAAGCTAGCTGTCTTAATGACCGAGGGTACATCGGAGACAACCTCCAAGGTAGGGATAAGGTCTGTGTACATCCCCTCCTCAGACCCCACACGTGCGACTGTACTGGGTATGTCTTTGTTGTAGTTGTCTTAATGAATGGCTTGTAAGTTGTGATATTGGTTCAATACGAGTTATATTTGAAGTTTTGAACCTTAACAGAGGATAACTGGTAAGATAAACAAATTCAATAAGATAAGGACAAATGCAAGGAAAAAGGAAAAGAGAAAGATGGTTAAAAATATAGCAGCACCTGCACTCACCACTAGTCAAGCAGACAAGCAGTACTGATCTTTTGGCTTCACAATATAGCAGCTCCTTTGCCCCGAAAATAGTCTAGTTTGAAGGTAGAAGCAGCTAGATAGACTAGTGTAATCTATTTTACGATCGTGCTATGCAAGCAGAACATAAATATGCCAATGGATCGGCAAAAACAGTAGTTGTAGGTATCTATTAGATCTTTCTGTTATAGCTTTAAAGTACTTTTGAGTTGAGGGTAAATTTTCCTTACTTTTGACGAATGTTTTCCTTTTTATGTTCAACTTCTCGTTCATATAATCTGATATTTGCCTCCCCACTTCTTTCCACAGACAAACGCGACATGCTGTCCTTGCAGTTGATTTGCCTTATCATCGTTACAGATCCTCTGGCGTCATTCAACTTAATAGAAGAAAGTTCTGTAATTGTAAACTTCTTCCATATCACCGGTGCAGCTACGTGCTGCTACTTTTCACATTGTCTGCAAAATTCTTTGTTATACAGTAGATGTATTCGAGATATCTTAGATAAAAGGTTCTCAATGTTGTGTTAGGAGAGGAAGTTAATTGTAACCCCATATGGTCTGTTGTGTTCTGGGAATAGCCCAACTGGATAATTGCAGGAGATGCATATAACCCCTTTTTTACTATTTGAA</genome_strand>
        <mrna_strand>GAAGAGAAAAGCGCCACTACACAAAACTGCAAAAACCGCCTCTTTCACTTGAACAACAGCAGCAGCAGCAGCAGCAGCTATGGGGAAAAGCGATGATTCCATTCAGAGAAGGAAGAATAAGAAGAGTAGAAAGAAGCAAGATGACAAGGTATCTAATCGTATCGCTGGAATCATTGCTGCTAAGAAACGTCGACTCTCCGGCAAACGCCGTATGTGTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAATGTGCTATAGTTTACCTACACCTGAGGATCCATTCAATGAGAGGCATGGAAAAGTTGATCCTGTAAAGAAGAAGAAGAAGAAGCAGAACCAGTCGAAAAAGGGCAAGAACCCTATTAAGAAGACCGGTTTACCACAAAATTCTGACAAATTAAAGGAAGAGTTCCACATGCATGCTCCATCTAAGTTCTTAATTCTCTGTTTGAAAAACATTCAGGATGACCTTCAGCAGGATGGAGCCTTCAGTGGTAGAGAGGAAAAGCCTTTCTTCATCCATACATGGGGAATTGAATTCTGGAAATATTTTACCAGTGGCAAAGATATTATTGGTACAAATCAAGCCCATGCTACAACTGAGCAAATTGCTTGGGTTGCAGCAACAACTGCTGATGCCATATCAAGAAAGGAGAAAGAAGGTCTATCAATTAGCAACCCCTACCTTTTATTCCTTGTTCCCTCCCAAGAGAAAGCTGTCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGGAAAATATGCAAGCCTCTGAAAGCTCTTGGAATACATACAGTGAGTCTGCATCCTGGTGCTTCTATAGACCACCAGATTCAGGG..........................................................................................................................................................................................................................................................................................................................................CCTGAAGAACTGTGAGCCCGAATTTCTTATTTCTACTCCTGAAAGACTTCAAGAACTCCTCTCACATGGTGCCATTAAAACTTCTGATGTTTCTTTCCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATCGATGGACCTCTTTCTGAGACAGGTTATGTTGATGCGGTTGAATCCATTGCAAAATCTATTTCTGGAAAGCCACAAATACTGGCTTTCAATGATTGCTCAAATTCTTCATCCAATTTTCTTATGAAGAAGAGTGTTGGAGAATCAATCTGTAGAATACCGCTTGATGATCCAGTAAATGATCATAACATGGCTTGAGATATTTGTGCTTCTAAGTTGTCAATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAACGCGACATGCTGTCCTTGCAGTTGATTTGCCTTATCATCGTTACAGATCCTCTGGCGTCATTCAACTTAATAGAAGAAAGTTCTGTAATTGTAAACTTCTTCCATATCACCGGTGCAGCTACGTGCTGCTACTTTTCACATTGTCTGCAAAATTCTTTGTTATACAGTAGATGTATTCGAGATATCTTAGATAAAAGGTTCTCAATGTTGTGTTAGGAGAGGAAGTTAATTGTAACCCCATATGGTCTGTTGTGTTCTGGGAATAGCCCAACTGGATAATTGCAGGAGATGCATATAACCCCTTTTTTACTATTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U340588" ref_strand="+" ref_description="SGN-U340588        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, contains Pfam domain PF05003: protein of unknown function (DUF668) | chr5:1303181-1306117 REVERSE | Aliases: T32M21.140, T32M21_140(evalue: 3e-26, score=115) genbank/nr: putative(evalue: 3e-67, score=245)">
      <seq>tatgctcagtcatctgttcacccatctgaaagtagtctctctagattttcttcggaaccagtagaaagcatccttgcgaaatctggaccaatttcgagcactaggaacattcacagttcttattccggtcccttgaaaagttcaacatcaacagcaagcccgattcctggaaggcattcttctgctggtttctattcgggtcctctggggaggtcaacaacaaaatctggtcctctccctctatttaataaatccggcatgaagtggtggaaatcccgtgatcgttcaggtaacctaaatggaaaaggctcaaatttaaaacatgctcgaccgacctctggaccgcttaaaggctgcatgatggttgggaatggtgctcctgtaagtaattgccatctagatccacacggatttcattcaggttttctaaatgcaacgaaaggagctggtgtagatggacttgctgatggctattcaacttgctcttatctaacaagttataatgcgaaaaaaaggctgttaaatgctcctccagaaactctcggggctgctgccttagcactgcattatgcaaatgtcattatcgtgactgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0143O06.1" temp_strand="+" temp_description="C11HBa0143O06.1  AC220058.1 htgs_phase:3 submitted_to_sgn_as:gi|170933588|gb|AC220058.1| sequenced_by:ivf-caas upload_account_name:china11 Solanum lycopersicum chromosome 11 clone C11HBa0143O06, complete sequence">
        <position start="26477" stop="27670"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26777" g_stop="27370" g_length="594"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="594" r_length="594" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0143O06.1" gen_strand="+" ref_id="SGN-U340588" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>594</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0143O06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U340588" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26777" e_stop="27370"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATGCTCAGTCATCTGTTCACCCATCTGAAAGTAGTCTCTCTAGATTTTCTTCGGAACCAGTAGAAAGCATCCTTGCGAAATCTGGACCAATTTCGAGCACTAGGAACATTCACAGTTCTTATTCCGGTCCCTTGAAAAGTTCAACATCAACAGCAAGCCCGATTCCTGGAAGGCATTCTTCTGCTGGTTTCTATTCGGGTCCTCTGGGGAGGTCAACAACAAAATCTGGTCCTCTCCCTCTATTTAATAAATCCGGCATGAAGTGGTGGAAATCCCGTGATCGTTCAGGTAACCTAAATGGAAAAGGCTCAAATTTAAAACATGCTCGACCGACCTCTGGACCGCTTAAAGGCTGCATGATGGTTGGGAATGGTTCTCCTGTAAGTAATTGCCATCTAGATCCACACGGATTTCATTCAGGTTTTCTAAATGCAACGAAAGGAGCTGGTGTAGATGGACTTGCTGATGGCTATTCAACTTGCTCTTATCTAACAAGTTATAATGCGAAAAAAAGGCTGTTAAATGCTCCTCCAGAAACTCTCGGGGCTGCTGCCTTAGCACTGCATTATGCAAATGTCATTATCGTGACTGAG</genome_strand>
        <mrna_strand>TATGCTCAGTCATCTGTTCACCCATCTGAAAGTAGTCTCTCTAGATTTTCTTCGGAACCAGTAGAAAGCATCCTTGCGAAATCTGGACCAATTTCGAGCACTAGGAACATTCACAGTTCTTATTCCGGTCCCTTGAAAAGTTCAACATCAACAGCAAGCCCGATTCCTGGAAGGCATTCTTCTGCTGGTTTCTATTCGGGTCCTCTGGGGAGGTCAACAACAAAATCTGGTCCTCTCCCTCTATTTAATAAATCCGGCATGAAGTGGTGGAAATCCCGTGATCGTTCAGGTAACCTAAATGGAAAAGGCTCAAATTTAAAACATGCTCGACCGACCTCTGGACCGCTTAAAGGCTGCATGATGGTTGGGAATGGTGCTCCTGTAAGTAATTGCCATCTAGATCCACACGGATTTCATTCAGGTTTTCTAAATGCAACGAAAGGAGCTGGTGTAGATGGACTTGCTGATGGCTATTCAACTTGCTCTTATCTAACAAGTTATAATGCGAAAAAAAGGCTGTTAAATGCTCCTCCAGAAACTCTCGGGGCTGCTGCCTTAGCACTGCATTATGCAAATGTCATTATCGTGACTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U332351" ref_strand="+" ref_description="SGN-U332351        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr5:1296443-1302429 REVERSE | Aliases: T32M21.150, T32M21_150(evalue: 2e-59, score=225) genbank/nr: gi|8567785|gb|AAF76357.1| myotubularin related protein, putative [Arabidopsis thaliana](evalue: 2e-67, score=258)">
      <seq>ttcacaaccaccaccaccgnttctcgagtcgccgccaccgccatgtatcggagtcggtcggcgcgatcctcatcactcagggagccggagagtcgactctctgagtccgacaaaattgaaggtgccggtagctgggatgcccttgaatggaccaaaatcgatcctgttgcgaggtcgattcctattggagttaaacagtttttgttggaagccgagcaagttatagtagagggttatggggtagttcttgtcaacactgatgatgctggaaccttatacgtgactaattttcgcctcctattcttgagtgaagggtctagagatatcatcacaattggcacaataccgttggcaaccattgaaaagttccagaaaattgctgtgaagcttccatcaggtccacgtcaacctgaaaagactagatcacagcgattgcttcagatcatcggcaaagatatgagaatcatcgtgtttggttttcgtgctcgaaccaagcagaggcgtgctgtctatgatgcattattacggtgtacaaggcctgcaactttatgggatctctatgcatttgctggtggtccatccaggtttagcaacacaaatcccaaagtaaggctgttgaatgagtattgccgacttcttggaatggggttttatcaagcttctatccgtgctattgaagatggggcatttac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0143O06.1" temp_strand="+" temp_description="C11HBa0143O06.1  AC220058.1 htgs_phase:3 submitted_to_sgn_as:gi|170933588|gb|AC220058.1| sequenced_by:ivf-caas upload_account_name:china11 Solanum lycopersicum chromosome 11 clone C11HBa0143O06, complete sequence">
        <position start="38709" stop="47578"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39009" g_stop="39169" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="162" r_length="162" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="39170" i_stop="39322" i_length="153">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="39323" g_stop="39391" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="163" r_stop="231" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="39392" i_stop="41136" i_length="1745">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="41137" g_stop="41211" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="306" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="41212" i_stop="42051" i_length="840">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42052" g_stop="42123" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="378" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="42124" i_stop="42413" i_length="290">
            <donor d_prob="0.705" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="42414" g_stop="42483" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="379" r_stop="448" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="42484" i_stop="42575" i_length="92">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="42576" g_stop="42625" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="449" r_stop="498" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="42626" i_stop="47084" i_length="4459">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="47085" g_stop="47278" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="499" r_stop="692" r_length="194" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0143O06.1" gen_strand="+" ref_id="SGN-U332351" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>691</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0143O06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U332351" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39009" e_stop="39169"/>
          <exon e_start="39323" e_stop="39391"/>
          <exon e_start="41137" e_stop="41211"/>
          <exon e_start="42052" e_stop="42123"/>
          <exon e_start="42414" e_stop="42483"/>
          <exon e_start="42576" e_stop="42625"/>
          <exon e_start="47085" e_stop="47278"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCACAACCACCACCACCG-TTCTCGAGTCGCCGCCACCGCCATGTATCGGAGTCGGTCGGCGCGATCCTCATCACTCAGGGAGCCGGAGAGTCGACTCTCTGAGTCCGACAAAATTGAAGGTGCCGGTAGCTGGGATGCCCTTGAATGGACCAAAATCGATGTAAATATATTTCACTTCTCTTAGGGTTCTATAAATTCAATTCAATTTATAGATTCCGTTTAATGTGTGTTGAATTCTTCTAAAAACAATTTAATTGAATGCGGAATTTAATTTTTTTTTCCTTTTTTTTTTTTGGGTGATTAATACGTGCAGCCTGTTGCGAGGTCGATTCCTATTGGAGTTAAACAGTTTTTGTTGGAAGCCGAGCAAGTTATAGTAGAGGTAACTATATCTGTGCTTTTTATTTGGTGTATCTATGTATGTGTAGTGCATTTTCAATAATTGTGTTTCCAGACAATGAAATCATGCCTCTAGTGATTAATTGATGTGTAGTTATAGTACGGAATATAGATGCTTTTTGGAAAGAAATCTGCAAGGAAATAATTAGAGGATAATTTGTATTGTTATTTACGGTGTGTGCGCAATGTATTGAAAGAATGATACTTAAAGTAGTGGTTATTTGAATCTCCACTTTGAGGAATTGGATTAATTTTCACAACATTATGTTATGGATGCTGAAATTATTTATTTCAATTGTAATTTGATTAGTAGGTACTGAATTCGGGTATGCTTTTTCACACTTTGTACATATACTGTGAGCATTTTCTGATCATGATGTAAATAATTCCGAGATGCAAGAAAAGAATGCATTGATGCGAGGTAACATAAAGAATGCTTTTGGGGAAAGTTATTCTCATTTCTTAATTGCTTACAGAAAATGAAGTATCATATGTAGATGATATGTTGTTTTCTTTAGGGGCGGGGGTTCCATATCGCTCGATGTCACTTATTATTGAAAAATTAAATCTGGCCCTTAGTTGCGAATATAAGGATTTCATCCATTACAGAAAAGTTGGTCGGCCTGTACACAGTGAGAATATGTTATACAACCAAAGTGGAGCAATTTGGAGATCAACAAGATGTTTTTATGGTTGGCTAGGTGTATGATTTTGGTTAAAATTTGCCAGTTCACTTAAGTTTAGAGGTACTTAAAAAGGGTTTACTATGGTTAACCAACCACCTTATGAATTGTGAATGTGTCCCTGCGATTTTTTGATAGGATAAAGTAGCGTTGGGAGTAGTATCTTAGCTTTAACGTTTCTGTAGAAGATGGGCATCTCTTTCTTAGGGAACTTAGTACTTAGTTCAGGGATTATGGTCTTAGAAGCTTTTATTCCCATCCGACATAGGACCTGATCTCCGAACTTTAACTAGATAAGCTTCCTTTTAACTCTGTAAGAGACTAACAATTATCCTTTTTTTTTTGCAACTTAGTTATTCAGTTGTCTCTTAAGCTTTTGCACAAGAATGTGATCGAACTAATCTTTCTTCCTTTTTATTTTTGCTGAAATCTTTGACTATTTGAAGCCTTTCAGATTCTTCAGCTTAAGAAATTATTATTTTCTAATCATTATCAAGAAAATAAATTATTATCTTTTATTGATGTTTCTTGAAAGTACATTTAGTCAATTATCTAAAAAAAAAGGTCTACCTTTAGTAAATTATTATAAATCCTCAGGTTGTGTTTCAAACAAGATGGTGACAGTTTATTTCTGAATTTTCTTTGTTTAGAAGCATTTATTAACTAATGCATAAGATACAAAATATGATTTACCTCACATACAGTGCTATTTTTAATATTTTTCCTGATTTATTGGGAAGACATGACGCTGGTTCGTGAGGGTCTTAATTTCTTTTTTTTTTCATTAGTTTATATGTTGATTTCTTCGATAGTTACTGAATATCTTGATTGTTTCTTTCTTATGATCATTTGGTTATTTATCTACTCATGTGTTCGTATAGAGTTTTATTTAGATCATGAAGACTTATCATATTGGAACAACTTATTAATAAGTTATTGATAAAAAGCCTCTGTACTAAAGCCTCAAATTGATCTAGTAGAGGCTTTCATCAGTTTCTTTTCTCTTCAGTTGGCACAAGCCTGAAGGTTAACTGATTATTTCCAGGGTTATGGGGTAGTTCTTGTCAACACTGATGATGCTGGAACCTTATACGTGACTAATTTTCGCCTCCTATTCTTGGTAAGTAATACACGCAGTTCTCATATTTTATATCTGATGGTGTATATGGCCTGGTTATGGAAGTTCCCTTTTGTAAATCTATGCCAGTGAAATTGCCCTCTAATACTGCAAATTCATTTTTTAAATAATATTATCGGAAACATCCTCTCTACCTTCACAAGGTAGGGGTAAGGTTGCGTATGCACCACCTTCTCTCGACCTCGCTTGTGGGATTACACTAGATATGTTATTGTTGTATAATATTGTAATGATTTATAAAGCACTTGATTTCTGAAGGTCTAGTGTCAATCTTAAGAGCCATACTGATGAGGTATTTAGATTGTTAAAATTTGTGAATGCTTACGCCTTATCTTTTTTTTGGATGCATGTGCATTGACTTTGAAAAAAACGTATTTTACTTCTTTTTCTCTACAGTTGAACAGCTTATGCGGTGTAGTTTATTCTTTTTCTTTGGATGAAGTAAAATATTTTATATAGTAGGCATCAAGAATATGCAGCAAGTACAAAAGAAGGGTAAAAGACAGCTTGGTACAAAAAGTGCTAAGCTAGGAAGAGAGCTGACTGTCCAATAAGATTGTGATTTCTTGAATGCTCAGATAGTATTTCAACATTCTGTGGTTTTGGTGGTAGTTTCAGATTTCCTGCTGGGATTATTGAAAGATCTTGGTCTCACGCTTAAAATTGCTTTCTAAACTGCCTTGAGTGCTCTAGGCACGCATGCTTGGTTACATACATGAATTACATGAAATAATTTTGCAGTTCCACAATTTTCTTCTCATCTTCTTCTGCTTTCTGCTATTTTGTACTGAATTTAATGATGTTTCTCTTTGTATTATCTAGAGTGAAGGGTCTAGAGATATCATCACAATTGGCACAATACCGTTGGCAACCATTGAAAAGTTCCAGAAAATTGTAGGTTTGCTGTTGTTTCTTCTTATAATCCAGATATTCAACAGTTAAATTGTATCTCTCTTTTCATTTGAGATAAAGGTGGTGTCCGGTCAACTTTTGCGCACTTCAATTAATCGACAACATAGTTGTGTTCACTAAAGTTAGCTATATGGGAAGAAACCACCTAGCTTTTTTCCCTCTATATAAATTTGAACCTTGGTCTTTCACGGTCCATTCTAGAATCAGTACTATGTAACCCTTTCCTGTGTTGGTCAAGTCTGGCTATAATTCTTTCTTTTCCTGCTAACCAGGCTGTGAAGCTTCCATCAGGTCCACGTCAACCTGAAAAGACTAGATCACAGCGATTGCTTCAGATCATCGGTATGTTATTACATGAAGGCACTGTCCATCCTCGGAGAATATGTTATTATTAGATATTCTGATAATGGTAAATTAAATTTGTGTTTTTTCAGGCAAAGATATGAGAATCATCGTGTTTGGTTTTCGTGCTCGAACCAAGCAGGTTAACTCATGAAAACCCATGTGCTGATTTTATCACTTTTTTCTTATGTATATGCTTTGGGCTTCATTAAGATGATTTGGTCATTCATTAATATAATGGCTTTGTTATCTTCTCTTTGTGGTTGTGGGGGAGGAGGGGGTCCATGATATTCCCACTGCTTTATGTGTCTCGAACTTGCAGACCGAGTTCTCTATAGTAGCATGAGAGTTTCCAGTTTCTCTTCTTGACTGGGTGGTTTGAGTTTTTGTCCTTTGAATAAATTTTGTGGACTATTACTGATAGGAGATGTGCATTTCACCAAGTTTAATGCCCTGAGAAACTCAGGTTAGACAAAGTGAATTTAGAGATTTTGAAAATATAATGAGTTAGAGATTACAACGGTCAGAAATATCTAGATTCATTGTACATCTCTAGTTTATTTGGTAGTGTGCTTATAAAACTTGTACTTAAGTAGAAAGACAATAAATAGAAACTTCACTTTCCTCATTTAGGAAGAAGTATTCCATGAGGGTCTCCTAATACAATGAATCGTCTTTTATGTTATTTCTAACCAATTCTTAGGAGTTCTTTCCTCTACTTTATTGTCCTTTCTACAGTACCTGGGATTTATAAAATTTAGAGGTACTTATTTAAGTGTCCAGTCAATTACTTAATCGTGAAAATAAGTAAATTCTCACCATGTTTTGTTGTTCCTTGTTTATGCTTTATCCTCTCACAATGATGTTTTATACTGTCACATTGAAGTAGCATTCATTCTCTTTACCTTGATTCTTTCCTCAGTGATCTCCATTCCAGAAAAATAAAAAACTCAGGTCTTATGTCTTTGCTGTTTTTCTCCATTCCACCTGATTTTGACATACAAGAATTTTGTTGCAATACACGCAATGGTGAGATCTTCTCTGAGATCCTATGCTTATGCGGCTTAAGGTTTTAGTTCCAGTCGCAGGTACGTGGACGTGCCTCCCGTGTCAAGATTCTATCAGCCATGTTAACACGTCATCCCTGTCCCATGTCATTCCCTCTCTGTTACTTAAACAATACAGTTCACTTCATTATTTTAACCATTACATCCACATCATCTGACATGTCAAGTTATAATTCATTATAACTAACTTGTCCTGTGAGTAGTCCTTGTAATCTGAACCAACCAATCTAGTAACAGCCAGTAATCATTGCCATGACATCATTGTGCCACGCTGTTGGTCTATGTCAGGTGACTGGTCAAGTCAGCATCCACATCAGCTGACATGTCAAGTCTATAGTTCACATAAATGTAGCTAATATTCCATGCCAACCAATATGTCAAGTTAGTCAATTTATCTGGTTACTACTACACATTACCACTTGTCATTAAATCACACTGGCATACAGAATCTAGTCAATCAATAATAACAACATACCCGGTGAAATCAGAGGTTTGGGGTGGAGTATTGGCCAGTCACAAGCTCACATATTCATAAGATGCATGTTGCGGAGATGAGGATGGTGAGATGGATGTGTCAGCATACTAGGAGTGGCAAGATTAGGAATAAGGTTATTCGGAGAAGATGACAGTGGCCTCTGTAGTGGACAAGATGAGGGAAACGAGATTGAATGGTTTGAGTATGTCTAGAGGATGTGCGTTGATGGCCTAGTGAGGAGGTGCAAGAGGTTAGTTGTAGGGGATACGCGGAGGGATAGAGGTACACGAGAAAGTAGTGGGGAAGAGGTGAGTAGATAGTACATGGTGCAACTTATTACGGAGGACACGACTCTAGATAAGAAGGAGTGAGTTCGCATATTAGGGTAGAATGTTAGGGAGACGTGTTGTCTTGCAATATAGGTTTAGGCTTGTTAATGCCTATTGTAGTATTAGTCTTACCCTTGAAGTTCTTGTCATATGTTGTTTATTGTGTTTCAATTATTGCACTATTTTGTTTTTACGTTTCTTTCTTGTAGTCTTTAGATTGCTTTTCTTATTAAAGACTATGCTTTCTTCATTGTTTTTTCCTTCCTTTACTTGGGTTTGATCCACTTGAGCCGAGGATCTTTTGGAAATAGCCTCTTTATTTCCGCGAGGTTGTGGTAAGGTTTGCTTATACTCCACCTCTCCAAACTCCACTTAGTGGGATTTCGCGGGGTATGTTGTTGTTCTTGGGGTCTAGGGAGGGTATGCGTACGCAAGCTTTACCAGTACCTCATAAAGATAGTGAGGTTGTTTTCCAAAGATCCTCAATTCAAGTACAACAAATTCAGCTAATAAAAAAGAAAATAGTGAAGAAAACATAACAACTAGTAAGAGAAGTTGTGCTACAAGAAAATCATAAGAACAAGAAAAAAATAGTGTAGTAATGGAAACAAATGATAGTAGATATCAAAAGCAAGAACTACAAGAGTACGACTAGTACAACGATAGACCCAACAAGCCTAAACCCTACAAGATCTAGATAACACTCTCTACTACCTACTAATGTTCTACCCTAATACTCGACCTCCTCCACCCCCCTTATCTAAGATCATATCCTTGTTAATATGTAGTTGCGTCAAGTCCTGTCTAATGAAATTTCCCCAATGCCTTTTCAACTTACCTTTACCTTTTACTGTGCCTACTATATTCAACCTTTTACACTTCGGGGCGTCTGCGCATCTCCTTTTCATAGGTTCAAATCATTCTATCTCGCTCCCCTTATCTTATCCACCACGAACGCCACTCCTACCTTACCCCGGATTACCTTATTCCTAATTTTATCGCTCTTAGTATCTCCAGACATTCATCTCAGCAACCTCCGCAACATGCATTTTTTTGAACGTGGGAGTTTTTGGCCTAAACTTTGCCCCGTACTACATCGTCAGTCTAACCACCATTTTATAAGTTAAGTTTTGGTGGTGCATTTTTATTACACAAGACTCTAGAGGCAACCCTCCACATCGTATCAATATGATGTATGATATCATAATCGTTGAAGTCATCTTTCTTGGGAATAGCCTGTGTGCCAAGCTTCACTTCCACGCCTGCCTCATTCATTGTATCATTGAATTTTCACTCCATTTTGGTCCTGCTCAACCTAAACCCTTTAGACTCCTGAGTTTGTCTCCACACTTCTAGCCTAGCATTAACTCTACTACGTGTCTTTCAATCAAGACTATATCAATCGCAAATAACATACACTAAAGCACCTCGTTTTGAATATACCACGTCAATTCATCCATCACCCAGGCAAACAGGAATGGACTAAGAACTGATCCTTGGTGCAACCCCATCTCTAATGGGAAGTGTTACAAGTCTCCTTCTACCGTTCTAACTCGAGTTTTGGCTCCATCATACATGTCCTTTATTTCCCTTATATAGTTCACTTGTACACCTCCAGGCATCTCCGGAGGACTCCCCTTGGAACTTTGTCGTAGGATTTTTCAAGGTCATGAACACCACATGTAAGTCCCTCTTCCTTTTACGATATTTCTCCATTAGTCTCCTCTAAAGATGGATGGCTTCTGTAGTCGATCGCATCAACATGATTCCAAACTGGTTCTCGGAAATGGACGCATCTCCTCACCCTCATCTCTACTACTCTCTCCCAAATTGTACTCCACCTTCATTCTTCGGGCATTTTGTGGTCCTAAAAATGACGTCAAACAAACTAGAATGAATGTGCTTTCCAGGAGTCGGAAGTTAATTTTTCCATTTCGATGCATTCTGTTCCTATATTTTCCATTTTGATGCATTCTGTTCCTATATTTGAAGTCTAGTTGTCAAATTCTTTCTGAAGTCCAAGAATCAAGTACATTTTTGGTTAGCTTGGAGCGTTGATATATATACTTCTAGCTCGAGGGTGTTTAACAGAGTTGTATAGGATGCCGAGATGCTCTAGGTTAATTGTATAGCATGTTTCTAATAGTTGTATTATAATTGTGATAATCATCGAACTGTTTTATATAGGGAACTTCCCTAGTAATTTCCTTGTTTTAGAAACTTCTATCTATAAAATCCTATTGTAGGGTCATAACCAGCATTCATTTCAGAGTAATATTTTACAGCATTTACTTGTTGCTGTATATAAATGAATTACTTTTACCAAAAAAGTGTACATTCATTACGAGTTTTCTCTTTTTCTCTTGTTCTACAGCAATATTGAGATACTATTTTAACTTCTTCAGTGATAGCTGCATATAGATTTGCTTCAAAATGATGAAATTTATGCAGGATGAAGGTGTATTTGTGGGGAGCCACATCTCATTTGTGATGGCTTTAGTAGTTGTTAATACCTCCATATATGCTATTTCAATGCCCTGATGCATTGTAAGACAATTATGGTAGTTGAAACTGGACAGTAATCTGAATACGTATATGTTTAGCATAGATCTGTAATATCCTGCATTCATTAACAAAGTTATGCAGACTTTTTACTTCACAAGCTTGTCCTAACTTCTGGCGAAACAACTGCACACATTTTGCTTACAAGCTTTTCTTATGGTTTCCCAGAGGCGTGCTGTCTATGATGCATTATTACGGTGTACAAGGCCTGCAACTTTATGGGATCTCTATGCATTTGCTGGTGGTCCATCCAGGTTTAGCAACACAAATCCCAAAGTAAGGCTGTTGAATGAGTATTGCCGACTTCTTGGAATGGGGTTTTATCAAGCTTCTATCCGTGCTATTGAAGATGGGGCATTTAC</genome_strand>
        <mrna_strand>TTCACAACCACCACCACCGNTTCTCGAGTCGCCGCCACCGCCATGTATCGGAGTCGGTCGGCGCGATCCTCATCACTCAGGGAGCCGGAGAGTCGACTCTCTGAGTCCGACAAAATTGAAGGTGCCGGTAGCTGGGATGCCCTTGAATGGACCAAAATCGAT.........................................................................................................................................................CCTGTTGCGAGGTCGATTCCTATTGGAGTTAAACAGTTTTTGTTGGAAGCCGAGCAAGTTATAGTAGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTATGGGGTAGTTCTTGTCAACACTGATGATGCTGGAACCTTATACGTGACTAATTTTCGCCTCCTATTCTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAAGGGTCTAGAGATATCATCACAATTGGCACAATACCGTTGGCAACCATTGAAAAGTTCCAGAAAATT..................................................................................................................................................................................................................................................................................................GCTGTGAAGCTTCCATCAGGTCCACGTCAACCTGAAAAGACTAGATCACAGCGATTGCTTCAGATCATCG............................................................................................GCAAAGATATGAGAATCATCGTGTTTGGTTTTCGTGCTCGAACCAAGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCGTGCTGTCTATGATGCATTATTACGGTGTACAAGGCCTGCAACTTTATGGGATCTCTATGCATTTGCTGGTGGTCCATCCAGGTTTAGCAACACAAATCCCAAAGTAAGGCTGTTGAATGAGTATTGCCGACTTCTTGGAATGGGGTTTTATCAAGCTTCTATCCGTGCTATTGAAGATGGGGCATTTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U344918" ref_strand="+" ref_description="SGN-U344918        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: hypothetical(evalue: 2e-05, score=51.6)">
      <seq>gtctaaatggagaacattagtcccttctattcatgtttctgttgattcctctttggatattttatcagtaatattcttattagttgggactacgttttagtcatggtactacgttaactttaggttttatgttttctaagagcctcttagtcctatttagcagagacctcccccaggtttttgctccatcacactgacgtcccttgtgatatacaatactacacttatttgttttaatttctctataacatttcttttaacttatatattattaatttataaaaattgtgatatgactaacttgccatttgtaatatatgctgttttgcttaattaatattataaatgtacttctgtgaaataaaaagcaatacactagctctcttgcaatggcattgatgatctcataagagctatagaaatagggagctgctgatcactcgttcataggttaatcaagggttaagttggttgttttatagcagaactttttatgtgattatcatgtattaatatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0143O06.1" temp_strand="+" temp_description="C11HBa0143O06.1  AC220058.1 htgs_phase:3 submitted_to_sgn_as:gi|170933588|gb|AC220058.1| sequenced_by:ivf-caas upload_account_name:china11 Solanum lycopersicum chromosome 11 clone C11HBa0143O06, complete sequence">
        <position start="48918" stop="50033"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49218" g_stop="49733" g_length="516"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="517" r_length="517" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0143O06.1" gen_strand="+" ref_id="SGN-U344918" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>516</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0143O06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U344918" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49218" e_stop="49733"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTAAATGGAGAACATTAGTCCCTTCTATTCATGTTTCTGTTGATTCCTCTTTGGATATTTTATCAGTAATATTCTTATTAGTTGGGACTACGTTTTAGTCATGGTACTACGTTAACTTTAGGTTTTATGTTTTCTAAGAGCCTCTTAGTCCTATTTAGCAGAGACCTCCCCCAGGTTTTTGCTCCATCACACTGACGTCCCTTGTGATATACAATACTACACTTATTTGTTTTAATTTCTCTATAACATTTCTTTTAACTTATATATTATTAATTTATAAAAATTGTGATATGACTAACTTGCCATTTGTAATATATGCTGTTTTGCTTAATTAATATTATAAATGTACTTCTGTGAAATAAAAAGCAATACACTAGCTCTCTTGCAATGGCATTGATGATCTCATAAGAGCTATAGAAATAGGGAGCTGCTGATCACTCGTTCATAGGTTAATCAAGGGTTAAGTTGGTTGTTTTATAGCAGAACTTTTTATGTGATTATCATGTA-TAATATG</genome_strand>
        <mrna_strand>GTCTAAATGGAGAACATTAGTCCCTTCTATTCATGTTTCTGTTGATTCCTCTTTGGATATTTTATCAGTAATATTCTTATTAGTTGGGACTACGTTTTAGTCATGGTACTACGTTAACTTTAGGTTTTATGTTTTCTAAGAGCCTCTTAGTCCTATTTAGCAGAGACCTCCCCCAGGTTTTTGCTCCATCACACTGACGTCCCTTGTGATATACAATACTACACTTATTTGTTTTAATTTCTCTATAACATTTCTTTTAACTTATATATTATTAATTTATAAAAATTGTGATATGACTAACTTGCCATTTGTAATATATGCTGTTTTGCTTAATTAATATTATAAATGTACTTCTGTGAAATAAAAAGCAATACACTAGCTCTCTTGCAATGGCATTGATGATCTCATAAGAGCTATAGAAATAGGGAGCTGCTGATCACTCGTTCATAGGTTAATCAAGGGTTAAGTTGGTTGTTTTATAGCAGAACTTTTTATGTGATTATCATGTATTAATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U323108" ref_strand="+" ref_description="SGN-U323108        Tomato 200607 #1 [7 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr3:3292904-3296874 REVERSE | Aliases: F13M14.17(evalue: 4e-76, score=281) genbank/nr: gi|12322799|gb|AAG51396.1| putative myotubularin; 50488-54147 [Arabidopsis thaliana] (evalue: 3e-74, score=281)">
      <seq>gtagatcttctggattgcatgctttcttgtcgttttgggaactttttgtgcaacagcgagaaggaaagagagcaagctggtatatatgatgcttgtggatgcctgtggatgtatttagctggactaaggacatctgaaggaagctctcatgcgcattacaacctattctatgacccactgaaacataatggtcctatacttccaccagcagcagctttagctccaactgtgtggcctcagtttcaccttcgttgggcttgcccctcagaggcgcaaggtggggaagttgaagctgaatgcaggaagctgacgagaaaattctctgagctgcaaagggccaaagaactagcagaaacaagacttaacgaagcaagtgtctccgtggagtccttagttacagaactgagaaatgagaaacttgcaagcacctctgccagggatgcggtaaaaagagcaagcaaagaaactgctactataaagcgtgcagtacaatctttggggttcaatgtctactttacagcagatggagactgtaatgtaggcattgaaaggaacccaaccgaaatccctcagcgatctatctgctcagtttttacaaaagatattaatggcacagtgtcccacagtgagaaagcagacctctctgaacctgtttctgtggcagaagataatgtttccgacaatcctctcatccgagtttgtggatctctatgcccgaagcacactagagatggagagtgtcagttgccaaatgctggttgtgctcagtttcagagccaattggttgatttcaaagccaactttgatgcatttgatcggctttcgatatatgatagttatttcggaagttaagaaagatggtttcagctaagcatcaagctcagtttatgtgatcagatatctttgtacagttgggaattaaatggaggcggcagtaggttcagtttctattattagcaaaaatcacagcaaacaattagacagaagtagcagtagtgagtacaaccagctttgaaacatagtttctgttagattgagatggctcaagaactgtacatggagaactgatttgagtttctatgcggatcatctgaaagttttgacatcgcggaggattgagaagatttgaactgatattatttagatacaattcatatgtacattttgacataggcgttcctcctcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0143O06.1" temp_strand="+" temp_description="C11HBa0143O06.1  AC220058.1 htgs_phase:3 submitted_to_sgn_as:gi|170933588|gb|AC220058.1| sequenced_by:ivf-caas upload_account_name:china11 Solanum lycopersicum chromosome 11 clone C11HBa0143O06, complete sequence">
        <position start="51348" stop="54219"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51648" g_stop="51703" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="51704" i_stop="52295" i_length="592">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52296" g_stop="52575" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="336" r_length="280" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52576" i_stop="53069" i_length="494">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.871" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53070" g_stop="53919" g_length="850"/>
          <reference_exon_boundary r_type="cDNA" r_start="337" r_stop="1186" r_length="850" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0143O06.1" gen_strand="+" ref_id="SGN-U323108" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1186</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0143O06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U323108" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51648" e_stop="51703"/>
          <exon e_start="52296" e_stop="52575"/>
          <exon e_start="53070" e_stop="53919"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAGATCTTCTGGATTGCATGCTTTCTTGTCGTTTTGGGAACTTTTTGTGCAACAGGTAATCTATCTTGGAAGTATTTTCTTTTGCACTTTCATTTCTGTACACTTTTTTGTTGAAAAAAGGGAATTACACACACTCTGTTAAGAAGTTAAGGTGCTTGTTTGATATATTGATATGAACGAGATCCAGGTCTGATAAAAGGGAATAGAATTAGAGTTAACAACCTGAAGAAGAGGTGTTATAGTTCTGAGGCGTCCTCTTTCTATAATATCCCCCGGGTCACGTTTGAATCATGTTAAAAGCTAGGTCTCTTGTTCAACACAAAAGAGCATAGTCATTGTCATGTGTGTGTGACTTATTTTAAAAGAAATTATCCCATATTATGATGCAAGAATGACTACATGAAAAAAAAATCATTTTTTGTATCTGTTCTTTTCTTTCTTTCTTCATTCATTTTTTTTGGGTGGGGTCGGGGGTGGGTTATTTATACTTTTATGATCAGGATTTGCAGCTATTAAGCACTGTAGGAAAATTTGCCACCTCAGTGGTTTTGGCTTTACGTTGTTTGAACTCCATCACGGGAAGCTAGGATTCTCTAAATGTCATTTCCTAGTTTTAATTCACTTCTTCTGACTTTTATAAATTTCAGCGAGAAGGAAAGAGAGCAAGCTGGTATATATGATGCTTGTGGATGCCTGTGGATGTATTTAGCTGGACTAAGGACATCTGAAGGAAGCTCTCATGCGCATTACAACCTATTCTATGACCCACTGAAACATAATGGTCCTATACTTCCACCAGCAGCAGCTTTAGCTCCAACTGTGTGGCCTCAGTTTCACCTTCGTTGGGCTTGCCCCTCAGAGGCGCAAGGTGGGGAAGTTGAAGCTGAATGCAGGAAGCTGACGAGAAAATTCTCTGAGCTGCAAAGGGTAACCTCTTTCCTTTTATCCTTTTTCCCCCTTTGTCTTAGTATCCCTGTAATTTTTCCATAGGGTTGAATATGTTCCTGTATACTCTCTTTAATATGTAATTAGGAACTTGAAGTTATAACATGTTGTGGCAGGTTTGGATATTTTAGAAATAGAAATACAAATTGTTACCCTCTTTTTTCCTCTGCTGACTCCTCTCTCCTCTGGCCTCTCCGAAAAGGAAAAAAAGAAAGTTTCCAGCTTGAAACTGCGAGTGCATGAAAACCTAAATATAGCATCTTAATGTTGACAGAAATTATAATGGTAGACCAAATTTGGCTTATATCAGTTCCATGAGAAGATTAACTACTATGACAAGCATAACTTTCTAGCTTATTTGTAGTGTAGCATGTAGCTGTCGCTCGACTGTTGCATCTTAATTTTGTCAATGCATGCTAGAACTTGGGGTGTATCCATAACTCCTTCATTAACCGTCTAAAACAACTTTTACACAGGCCAAAGAACTAGCAGAAACAAGACTTAACGAAGCAAGTGTCTCCGTGGAGTCCTTAGTTACAGAACTGAGAAATGAGAAACTTGCAAGCACCTCTGCCAGGGATGCGGTAAAAAGAGCAAGCAAAGAAACTGCTACTATAAAGCGTGCAGTACAATCTTTGGGGTTCAATGTCTACTTTACAGCAGATGGAGACTGTAATGTAGGCATTGAAAGGAACCCAACCGAAATCCCTCAGCGATCTATCTGCTCAGTTTTTACAAAAGATATTAATGGCACAGTGTCCCACAGTGAGAAAGCAGACCTCTCTGAACCTGTTTCTGTGGCAGAAGATAATGTTTCCGACAATCCTCTCATCCGAGTTTGTGGATCTCTATGCCCGAAGCACACTAGAGATGGAGAGTGTCAGTTGCCAAATGCTGGTTGTGCTCAGTTTCAGAGCCAATTGGTTGATTTCAAAGCCAACTTTGATGCATTTGATCGGCTTTCGATATATGATAGTTATTTCGGAAGTTAAGAAAGATGGTTTCAGCTAAGCATCAAGCTCAGTTTATGTGATCAGATATCTTTGTACAGTTGGGAATTAAATGGAGGCGGCAGTAGGTTCAGTTTCTATTATTAGCAAAAATCACAGCAAACAATTAGACAGAAGTAGCAGTAGTGAGTACAACCAGCTTTGAAACATAGTTTCTGTTAGATTGAGATGGCTCAAGAACTGTACATGGAGAACTGATTTGAGTTTCTATGCGGATCATCTGAAAGTTTTGACATCGCGGAGGATTGAGAAGATTTGAACTGATATTATTTAGATACAATTCATATGTACATTTTGACATAGGCGTTCCTCCTCC</genome_strand>
        <mrna_strand>GTAGATCTTCTGGATTGCATGCTTTCTTGTCGTTTTGGGAACTTTTTGTGCAACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGAAGGAAAGAGAGCAAGCTGGTATATATGATGCTTGTGGATGCCTGTGGATGTATTTAGCTGGACTAAGGACATCTGAAGGAAGCTCTCATGCGCATTACAACCTATTCTATGACCCACTGAAACATAATGGTCCTATACTTCCACCAGCAGCAGCTTTAGCTCCAACTGTGTGGCCTCAGTTTCACCTTCGTTGGGCTTGCCCCTCAGAGGCGCAAGGTGGGGAAGTTGAAGCTGAATGCAGGAAGCTGACGAGAAAATTCTCTGAGCTGCAAAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAAGAACTAGCAGAAACAAGACTTAACGAAGCAAGTGTCTCCGTGGAGTCCTTAGTTACAGAACTGAGAAATGAGAAACTTGCAAGCACCTCTGCCAGGGATGCGGTAAAAAGAGCAAGCAAAGAAACTGCTACTATAAAGCGTGCAGTACAATCTTTGGGGTTCAATGTCTACTTTACAGCAGATGGAGACTGTAATGTAGGCATTGAAAGGAACCCAACCGAAATCCCTCAGCGATCTATCTGCTCAGTTTTTACAAAAGATATTAATGGCACAGTGTCCCACAGTGAGAAAGCAGACCTCTCTGAACCTGTTTCTGTGGCAGAAGATAATGTTTCCGACAATCCTCTCATCCGAGTTTGTGGATCTCTATGCCCGAAGCACACTAGAGATGGAGAGTGTCAGTTGCCAAATGCTGGTTGTGCTCAGTTTCAGAGCCAATTGGTTGATTTCAAAGCCAACTTTGATGCATTTGATCGGCTTTCGATATATGATAGTTATTTCGGAAGTTAAGAAAGATGGTTTCAGCTAAGCATCAAGCTCAGTTTATGTGATCAGATATCTTTGTACAGTTGGGAATTAAATGGAGGCGGCAGTAGGTTCAGTTTCTATTATTAGCAAAAATCACAGCAAACAATTAGACAGAAGTAGCAGTAGTGAGTACAACCAGCTTTGAAACATAGTTTCTGTTAGATTGAGATGGCTCAAGAACTGTACATGGAGAACTGATTTGAGTTTCTATGCGGATCATCTGAAAGTTTTGACATCGCGGAGGATTGAGAAGATTTGAACTGATATTATTTAGATACAATTCATATGTACATTTTGACATAGGCGTTCCTCCTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U318305" ref_strand="+" ref_description="SGN-U318305        Tomato 200607 #1 [15 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr3:19382265-19383653 FORWARD | Aliases: T25B15.4(evalue: 9e-12, score=67.4) genbank/nr: gi|515932|emb|CAA56654.1| E24 ASN [Spinacia oleracea] (evalue: 4e-11, score=71.2)">
      <seq>gatttccccaaagtcaaaaacctccaaaaacttagctatggcggacaccacaacaacaacaacaatctccggtgactctattacggttaccgatgaccagaaaaacaatcccacgaacccacttgcatcatttatctctagtgttcttcagcttttcaaaccgccgccggcatctagtaagaagattgaacccaccgctgctacttcagacctcaaaccaattgcttcagctgaaaaagaggagaaagctgctgtagtgaagtttccgcgacaggatttgccttcgttgaagctcgaaacagaaggggctgaacctaatacaaatcccattgtcttgtggcaggtttatgctatcggagggttctttgtcttaaggtgggcatggtcaagatggaacgagcgtcgtggaaacaggaagccatccgatgaagagcctcctcccagtcaagagtagactttgtactgcaacatgttagaaaagagaaaacaaagaatgacacttgtggagacaggtttatgactttatttgagtcttgtaaagtgttgaaatcacagttctggttttacagtactaaatgtaaaaacccgaatcaagctttacgtcaatttgccagtcagcatcattttgtaaaaaaaaaatttcagcccttgttgataattcttgctaaagcaagtggatgcgtgcatgagctatactgtaagctcatatatttcattcaacttgataagttctttttaaatgaaaagatagtgctcttgagtacatgatatttggaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0143O06.1" temp_strand="-" temp_description="C11HBa0143O06.1  AC220058.1 htgs_phase:3 submitted_to_sgn_as:gi|170933588|gb|AC220058.1| sequenced_by:ivf-caas upload_account_name:china11 Solanum lycopersicum chromosome 11 clone C11HBa0143O06, complete sequence">
        <position start="58487" stop="54618"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58188" g_stop="57846" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="343" r_length="343" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57845" i_stop="55353" i_length="2493">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.923" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55352" g_stop="54918" g_length="435"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="778" r_length="435" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0143O06.1" gen_strand="-" ref_id="SGN-U318305" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>778</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0143O06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U318305" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58188" e_stop="57846"/>
          <exon e_start="55352" e_stop="54918"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTTCCCCAAAGTCAAAAACCTCCAAAAACTTAGCTATGGCGGACACCACAACAACAACAACAATCTCCGGTGACTCTATTACGGTTACCGATGACCAGAAAAACAATCCCACGAACCCACTTGCATCATTTATCTCTAGTGTTCTTCAGCTTTTCAAACCGCCGCCGGCATCTAGTAAGAAGATTGAACCCACCGCTGCTACTTCAGACCTCAAACCAATTGCTTCAGCTGAAAAAGAGGAGAAAGCTGCTGTAGTGAAGTTTCCGCGACAGGATTTGCCTTCGTTGAAGCTCGAAACAGAAGGGGCTGAACCTAATACAAATCCCATTGTCTTGTGGCAGGTATTATATTACTTATGCTCTGTTTCATTTTTGGAATTCAGTTTCATTTTATTAAGTCGTTTTAATTAGTTTTTGAGCTACTATTTGGTATTTGTGATTTTGGTGCGTGTATATATCAAATTAACATGATAAACTCCATATACTCCACCATCCCTGAACGTCATTTGTGTGGTTACATTGGGTATGTTGTTGTTGAAATTCCGTAGACCCACACCTTAGCTAGACCTCAGTTGTGGGATTATACTGGGTATGTTGTTGTTTGTGGTTGAAATTCCGTACAACTCGCCATCCTGAGACCTCATTTGTGAGATTATATTGAGTATGTGGTTGAAATTCCATACAGCCCACCATCTCCAGAACTCATTTCTGGGATTACATTTGATATGTTGTTGTTGAAATTCCGTACATCCCACCTCTAGTGATGCCACTTGTGGGATTACTCAGGATATATTGTTGTTTGTGGTTGAAATTCCGTAGACCCCACTGTCAGTAGACCCCGTATGTGGGATTATACTGGGTATGCTGTTGTTTTGTTGTTGGAATTCCATACACCCCACTGTCCCTGAACCCACTTGTGGGATTACATTGTGTGTGTTGTTATTGTTGTTGAAAATCCCTATACACCACCTCGCTAGACTCAACTTGTGGGATTAAATTGGGTATGTGGTTGTTGAAATTCCATACGTCCCATGCAGACTAGGTATGTTGATAAAATTCCTTGTGGAATTAATCGAATTGTTCTTTTGAATTCCTTCTGCTTATTAGGAGACGATCTTTTTTGCTATGTGAAATCTGATTGTTTGATTCTTTCACAGAAGCATATAGTTGACTTATTCAATGTAGAATATTACTCAGAAACAGGTGATAAAGATGACCCCCATGGTTTGCTATGTTATATAGCTAAGGTCAACTATAGTTGTGAAATGTATTGGCGTACAACTTTTCTGTTACTGGCTAAAGCATAGTTCTGCAAATGGAAGGATGGATAATGGTGCAAGGTGAGTAGAGACTATTTGGGTAAAGGCCCTTCATGTCTTGAATTAGAGAAGAGTTTTCGTTGACCGGCTCAAACTTAATTAAGTGGATTGAAGTGTGTAAACAGTTACTAAAAAGTCGTGGTAAGAATTAAAAACTCCAAAAATTATTAAAGAAACCATTGTTTTGGATTTTCAAATTTGAATTTTCTCTCCACTCCTCTTCATCTTCTCATCCTATATTTGGTTGGTGAAAAATATTTTCGAACAAATGGAGGGGATTCTCCAGTAATTCCAACAACTTTGCTACTTACTGAAGTTTTCAAACAAGCTCCATCAAAGAGTTATTGGACAACTGTTGAAGTTGTTGGGATGTGGTCTCAAAGAGGAGTTCTGTATTACCTTCTGGTTGTTGTGAGATTTCTATTATTCTGGGTTTAAGATAAACGCGGAGGCCGATGAGATGGGGGAAAGGAGCTTTATGTAAATAAAAAAACTTGTTGGTTTTTAAATATGTATCATTAATACTAATTAAAGGAGTCACTTGTAGCAAAGAACTTGAGTCACTCTTCCTTAAAAAGAAGACTCAAAAGTTGTCCACAACAGTTGTTGGTCAACTACTAAATTTGTTCCTGACAACTTCATATTTGTCTGCACCAGTTGTTGGACTACTACGTAATTCGTTCCAACACTCATTAGTAGTTATTGGAACACTTTGGACAACTTTAGTAAGTTGTTGGATTTACTGGATAATCCAACAACTTTTTCGTTTTCTTTCAATTGTTGGACTACTACATAATTCGTTTCTTTCAATTTTTTATTTCCTTGTAAGATCCTTGGCCTTTTGTAACTACCTACTGCCAGTATCAGTACCGTACTGATGAATACAATGTTACTTCTCTTAAAATGATAATAATAGTAGTATCAGATATCATAGTTCATGTATGGAGTAACTGAATGAGTACTGTGGAACCATCTGTTACATCTATTACATGTTTCAGAACATCAGCTGTATAATTTAGTAAGATGTAAATGAATCATCTTGCTGTGGATATATATACACATTAAAATACGTAAGGATGAAGTGGAAACAAGATTTTGTATTCTATATTGACACAAAGGCAGAGAAAAAAGGAAGGAAGAGAAATAGAGGAAGTGGGTTATAGTAAGTGTTCTTTCTCCTATATGCATGGACACAACTTGTTTATGCTTTTGGGGTTTATTCCATATCTGTCCTGATCTGTGTTCGATGACCAAATTTTCTAGATTTTATCTTTCCTTTTTTCTGTTTGTGTAGTTTCAAATTTTATTTGTCTCGATATAGTGTTCTGATGAGAAAATAAGTAGGTAAATGGATTCTGTAACCAAAAAAAGGAAAAGGAGGAAACATTGAACAATAATCTCTTTGACGAGCAAAATGCGGTGCCCCTACATATCTTAAGATTTCGCTTTTTTCCCTGTCATATTCTGCCTTATCTGCTCTTACCACCTTAATCTTCTGCACTGTTTCTGAAATCAGGTTTATGCTATCGGAGGGTTCTTTGTCTTAAGGTGGGCATGGTCAAGATGGAACGAGCGTCGTGGAAACAGGAAGCCATCCGATGAAGAGCCTCCTCCCAGTCAAGAGTAGACTTTGTACTGCAACATGTTAGAAAAGAGAAAACAAAGAATGACACTTGTGGAGACAGGTTTATGACTTTATTTGAGTCTTGTAAAGTGTTGAAATCACAGTTCTGGTTTTACAGTACTAAATGTAAAAACCCGAATCAAGCTTTACGTCAATTTGCCAGTCAGCATCATTTTGTACAGCCTGTGTTTCAGCCCTTGTTGATAATTCTTGCTAAAGCAAGTGGATGCGTGCATGAGCTATACTGTAAGCTCATATATTTCATTCAACTTGATAAGTTCTTTTTAAATGAAAAGATAGTGCTCTTGAGTACATGATATTTGGAGA</genome_strand>
        <mrna_strand>GATTTCCCCAAAGTCAAAAACCTCCAAAAACTTAGCTATGGCGGACACCACAACAACAACAACAATCTCCGGTGACTCTATTACGGTTACCGATGACCAGAAAAACAATCCCACGAACCCACTTGCATCATTTATCTCTAGTGTTCTTCAGCTTTTCAAACCGCCGCCGGCATCTAGTAAGAAGATTGAACCCACCGCTGCTACTTCAGACCTCAAACCAATTGCTTCAGCTGAAAAAGAGGAGAAAGCTGCTGTAGTGAAGTTTCCGCGACAGGATTTGCCTTCGTTGAAGCTCGAAACAGAAGGGGCTGAACCTAATACAAATCCCATTGTCTTGTGGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTATGCTATCGGAGGGTTCTTTGTCTTAAGGTGGGCATGGTCAAGATGGAACGAGCGTCGTGGAAACAGGAAGCCATCCGATGAAGAGCCTCCTCCCAGTCAAGAGTAGACTTTGTACTGCAACATGTTAGAAAAGAGAAAACAAAGAATGACACTTGTGGAGACAGGTTTATGACTTTATTTGAGTCTTGTAAAGTGTTGAAATCACAGTTCTGGTTTTACAGTACTAAATGTAAAAACCCGAATCAAGCTTTACGTCAATTTGCCAGTCAGCATCATTTTGTAAAAAAAAAATTTCAGCCCTTGTTGATAATTCTTGCTAAAGCAAGTGGATGCGTGCATGAGCTATACTGTAAGCTCATATATTTCATTCAACTTGATAAGTTCTTTTTAAATGAAAAGATAGTGCTCTTGAGTACATGATATTTGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U318304" ref_strand="+" ref_description="SGN-U318304        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr3:19382265-19383653 FORWARD | Aliases: T25B15.4(evalue: 4e-13, score=71.2) genbank/nr: gi|18409516|ref|NP_566963.1| expressed protein [Arabidopsis thaliana] gi|11357776|pir||T49102 hypothetical protein F4F15.340 - Arabidopsis thaliana gi|4678952|emb|CAB41343.1| putative protein [Arabidopsis thaliana] gi|15450439|gb|AAK96513.1| AT3g52230/F4F15_340 [Arabidopsis thaliana] gi|16974441|gb|AAL31224.1| AT3g52230/F4F15_340 [Arabidopsis thaliana] gi|21592837|gb|AAM64787.1| unknown [Arabidopsis thaliana](evalue: 3e-11, score=71.2)">
      <seq>gtcaaaaacctccaaaaacttagctatggcggacaccacaacaacaactatctccggtgactctactccagttaccggtgaccagaaaaacaatcccacgaacccacttgcatcatttatctctagtgttcttcagctttttaaaccgccgccggcatctagtaagaagattgaacccaccgctgctacttcagacctcaaaccaattgcttcagctgaaaaagaggagaaagctgctgtagtgaagtttccacgacaggatttgccttcgttgaagctcgaagcagaaggggctgaacctaatacaaatcccattgtcttgtggcaggtttatgctatcggagggttctttgtcttaaggtgggcatggtcaagatggaacgagcgtcgtggaaacaggaagccatccgatgaagagcctcctcccagtcaagagtagactttgtactgcaacatgttagacaagagataacaaagaatgacacttgtggagacaggtttatgactttatttgagtcttgtaaagtgttgaagtcacagttctggttttacagtactaaatgtaaaaacccgaatcaagctttatatgaatttgccagtcagcatcattttgtaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0143O06.1" temp_strand="-" temp_description="C11HBa0143O06.1  AC220058.1 htgs_phase:3 submitted_to_sgn_as:gi|170933588|gb|AC220058.1| sequenced_by:ivf-caas upload_account_name:china11 Solanum lycopersicum chromosome 11 clone C11HBa0143O06, complete sequence">
        <position start="58476" stop="54764"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58176" g_stop="57846" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="328" r_length="328" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57845" i_stop="55353" i_length="2493">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.923" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55352" g_stop="55064" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="617" r_length="289" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0143O06.1" gen_strand="-" ref_id="SGN-U318304" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>620</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0143O06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U318304" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58176" e_stop="57846"/>
          <exon e_start="55352" e_stop="55064"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCAAAAACCTCCAAAAACTTAGCTATGGCGGACACCACAACAACAACAACAATCTCCGGTGACTCTATTACGGTTACCGATGACCAGAAAAACAATCCCACGAACCCACTTGCATCATTTATCTCTAGTGTTCTTCAGCTTTTCAAACCGCCGCCGGCATCTAGTAAGAAGATTGAACCCACCGCTGCTACTTCAGACCTCAAACCAATTGCTTCAGCTGAAAAAGAGGAGAAAGCTGCTGTAGTGAAGTTTCCGCGACAGGATTTGCCTTCGTTGAAGCTCGAAACAGAAGGGGCTGAACCTAATACAAATCCCATTGTCTTGTGGCAGGTATTATATTACTTATGCTCTGTTTCATTTTTGGAATTCAGTTTCATTTTATTAAGTCGTTTTAATTAGTTTTTGAGCTACTATTTGGTATTTGTGATTTTGGTGCGTGTATATATCAAATTAACATGATAAACTCCATATACTCCACCATCCCTGAACGTCATTTGTGTGGTTACATTGGGTATGTTGTTGTTGAAATTCCGTAGACCCACACCTTAGCTAGACCTCAGTTGTGGGATTATACTGGGTATGTTGTTGTTTGTGGTTGAAATTCCGTACAACTCGCCATCCTGAGACCTCATTTGTGAGATTATATTGAGTATGTGGTTGAAATTCCATACAGCCCACCATCTCCAGAACTCATTTCTGGGATTACATTTGATATGTTGTTGTTGAAATTCCGTACATCCCACCTCTAGTGATGCCACTTGTGGGATTACTCAGGATATATTGTTGTTTGTGGTTGAAATTCCGTAGACCCCACTGTCAGTAGACCCCGTATGTGGGATTATACTGGGTATGCTGTTGTTTTGTTGTTGGAATTCCATACACCCCACTGTCCCTGAACCCACTTGTGGGATTACATTGTGTGTGTTGTTATTGTTGTTGAAAATCCCTATACACCACCTCGCTAGACTCAACTTGTGGGATTAAATTGGGTATGTGGTTGTTGAAATTCCATACGTCCCATGCAGACTAGGTATGTTGATAAAATTCCTTGTGGAATTAATCGAATTGTTCTTTTGAATTCCTTCTGCTTATTAGGAGACGATCTTTTTTGCTATGTGAAATCTGATTGTTTGATTCTTTCACAGAAGCATATAGTTGACTTATTCAATGTAGAATATTACTCAGAAACAGGTGATAAAGATGACCCCCATGGTTTGCTATGTTATATAGCTAAGGTCAACTATAGTTGTGAAATGTATTGGCGTACAACTTTTCTGTTACTGGCTAAAGCATAGTTCTGCAAATGGAAGGATGGATAATGGTGCAAGGTGAGTAGAGACTATTTGGGTAAAGGCCCTTCATGTCTTGAATTAGAGAAGAGTTTTCGTTGACCGGCTCAAACTTAATTAAGTGGATTGAAGTGTGTAAACAGTTACTAAAAAGTCGTGGTAAGAATTAAAAACTCCAAAAATTATTAAAGAAACCATTGTTTTGGATTTTCAAATTTGAATTTTCTCTCCACTCCTCTTCATCTTCTCATCCTATATTTGGTTGGTGAAAAATATTTTCGAACAAATGGAGGGGATTCTCCAGTAATTCCAACAACTTTGCTACTTACTGAAGTTTTCAAACAAGCTCCATCAAAGAGTTATTGGACAACTGTTGAAGTTGTTGGGATGTGGTCTCAAAGAGGAGTTCTGTATTACCTTCTGGTTGTTGTGAGATTTCTATTATTCTGGGTTTAAGATAAACGCGGAGGCCGATGAGATGGGGGAAAGGAGCTTTATGTAAATAAAAAAACTTGTTGGTTTTTAAATATGTATCATTAATACTAATTAAAGGAGTCACTTGTAGCAAAGAACTTGAGTCACTCTTCCTTAAAAAGAAGACTCAAAAGTTGTCCACAACAGTTGTTGGTCAACTACTAAATTTGTTCCTGACAACTTCATATTTGTCTGCACCAGTTGTTGGACTACTACGTAATTCGTTCCAACACTCATTAGTAGTTATTGGAACACTTTGGACAACTTTAGTAAGTTGTTGGATTTACTGGATAATCCAACAACTTTTTCGTTTTCTTTCAATTGTTGGACTACTACATAATTCGTTTCTTTCAATTTTTTATTTCCTTGTAAGATCCTTGGCCTTTTGTAACTACCTACTGCCAGTATCAGTACCGTACTGATGAATACAATGTTACTTCTCTTAAAATGATAATAATAGTAGTATCAGATATCATAGTTCATGTATGGAGTAACTGAATGAGTACTGTGGAACCATCTGTTACATCTATTACATGTTTCAGAACATCAGCTGTATAATTTAGTAAGATGTAAATGAATCATCTTGCTGTGGATATATATACACATTAAAATACGTAAGGATGAAGTGGAAACAAGATTTTGTATTCTATATTGACACAAAGGCAGAGAAAAAAGGAAGGAAGAGAAATAGAGGAAGTGGGTTATAGTAAGTGTTCTTTCTCCTATATGCATGGACACAACTTGTTTATGCTTTTGGGGTTTATTCCATATCTGTCCTGATCTGTGTTCGATGACCAAATTTTCTAGATTTTATCTTTCCTTTTTTCTGTTTGTGTAGTTTCAAATTTTATTTGTCTCGATATAGTGTTCTGATGAGAAAATAAGTAGGTAAATGGATTCTGTAACCAAAAAAAGGAAAAGGAGGAAACATTGAACAATAATCTCTTTGACGAGCAAAATGCGGTGCCCCTACATATCTTAAGATTTCGCTTTTTTCCCTGTCATATTCTGCCTTATCTGCTCTTACCACCTTAATCTTCTGCACTGTTTCTGAAATCAGGTTTATGCTATCGGAGGGTTCTTTGTCTTAAGGTGGGCATGGTCAAGATGGAACGAGCGTCGTGGAAACAGGAAGCCATCCGATGAAGAGCCTCCTCCCAGTCAAGAGTAGACTTTGTACTGCAACATGTTAGAAAAGAGAAAACAAAGAATGACACTTGTGGAGACAGGTTTATGACTTTATTTGAGTCTTGTAAAGTGTTGAAATCACAGTTCTGGTTTTACAGTACTAAATGTAAAAACCCGAATCAAGCTTTACGTCAATTTGCCAGTCAGCATCATTTTGTACA</genome_strand>
        <mrna_strand>GTCAAAAACCTCCAAAAACTTAGCTATGGCGGACA-C-C-ACAACAACAACTATCTCCGGTGACTCTACTCCAGTTACCGGTGACCAGAAAAACAATCCCACGAACCCACTTGCATCATTTATCTCTAGTGTTCTTCAGCTTTTTAAACCGCCGCCGGCATCTAGTAAGAAGATTGAACCCACCGCTGCTACTTCAGACCTCAAACCAATTGCTTCAGCTGAAAAAGAGGAGAAAGCTGCTGTAGTGAAGTTTCCACGACAGGATTTGCCTTCGTTGAAGCTCGAAGCAGAAGGGGCTGAACCTAATACAAATCCCATTGTCTTGTGGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTATGCTATCGGAGGGTTCTTTGTCTTAAGGTGGGCATGGTCAAGATGGAACGAGCGTCGTGGAAACAGGAAGCCATCCGATGAAGAGCCTCCTCCCAGTCAAGAGTAGACTTTGTACTGCAACATGTTAGACAAGAGATAACAAAGAATGACACTTGTGGAGACAGGTTTATGACTTTATTTGAGTCTTGTAAAGTGTTGAAGTCACAGTTCTGGTTTTACAGTACTAAATGTAAAAACCCGAATCAAGCTTTATATGAATTTGCCAGTCAGCATCATTTTGTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U326073" ref_strand="+" ref_description="SGN-U326073        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: | Symbol: None | pyruvate kinase, putative, similar to pyruvate kinase, cytosolic isozyme (Glycine max) SWISS-PROT:Q42806 | chr3:19659858-19663479 FORWARD | Aliases: F8J2.160(evalue: 1e-113, score=381) genbank/nr: gi|77548686|gb|ABA91483.1| pyruvate kinase [Oryza sativa (japonica cultivar-group)] (evalue: 4e-115, score=385)">
      <seq>cattattctactatttttctctgaactgagctcactcaccgcagtttcagtgacgatcggctaccggaaaaatgcactcgacgaacttgcttctcgaagaaccgattcgaatggcttcgattctcgagccatcaaagcctacgtttttttccagcaatgacgaagattgttggcacgctgggtccaaaatcacgttcggtggagattatctctagttgccttgaatcgggaatgtctgtggcacgatttgacttttcatggggagatgccgaatttcaccaagagacattggaaaatctaagggcagccgtcaaaaaatcaaagaagctctgtgcggttatgctagacactggtggtcctgaactacaagttgtcaataagagcgaacacccaatttcactccaagcagattccttagttgtcctgacacctgatcaagataaagaggctacaccaaatctactgccaataaattttagtggcctatcaaagtcagtgaagaaaggagacactattttcattggtcagtacttgttcacgggaagtgagactacctctgtgtggctagaggtaacagaggtgaaaggagaggatgtcgtttgcttgattaaaaattctgccaccttggccggaccattgtacacattacatgtctcccagatccgtattgagttgccaactctgacggacaaagataagaaggttataagcacttgggcctttcgaaacaaaatagatatcctttcactgtcatatacacaaaatgctgaagatgttcgacatgctcgtgaatttctatctaagctgggtgatcttgatcaaacacagatttttgctaagatagaaaatgtggagggaatggggcactttgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0143O06.1" temp_strand="+" temp_description="C11HBa0143O06.1  AC220058.1 htgs_phase:3 submitted_to_sgn_as:gi|170933588|gb|AC220058.1| sequenced_by:ivf-caas upload_account_name:china11 Solanum lycopersicum chromosome 11 clone C11HBa0143O06, complete sequence">
        <position start="67208" stop="71626"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67508" g_stop="67647" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="140" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="67648" i_stop="68227" i_length="580">
            <donor d_prob="0.937" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68228" g_stop="68324" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="141" r_stop="238" r_length="98" r_score="0.979"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="68325" i_stop="69268" i_length="944">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="69269" g_stop="69366" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="336" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="69367" i_stop="69473" i_length="107">
            <donor d_prob="0.831" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="69474" g_stop="69629" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="337" r_stop="492" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="69630" i_stop="70144" i_length="515">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="70145" g_stop="70222" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="493" r_stop="570" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="70223" i_stop="70603" i_length="381">
            <donor d_prob="0.237" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="70604" g_stop="70735" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="571" r_stop="702" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="70736" i_stop="71021" i_length="286">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="71022" g_stop="71102" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="703" r_stop="783" r_length="81" r_score="0.988"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="71103" i_stop="71253" i_length="151">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="71254" g_stop="71325" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="784" r_stop="855" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="71326" i_stop="71413" i_length="88">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="71414" g_stop="71432" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="856" r_stop="874" r_length="19" r_score="0.895"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0143O06.1" gen_strand="+" ref_id="SGN-U326073" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>873</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0143O06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U326073" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67508" e_stop="67647"/>
          <exon e_start="68228" e_stop="68324"/>
          <exon e_start="69269" e_stop="69366"/>
          <exon e_start="69474" e_stop="69629"/>
          <exon e_start="70145" e_stop="70222"/>
          <exon e_start="70604" e_stop="70735"/>
          <exon e_start="71022" e_stop="71102"/>
          <exon e_start="71254" e_stop="71325"/>
          <exon e_start="71414" e_stop="71432"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTATTCTACTATTTTTCTCTGAACTGAGCTCACTCACCGCAGTTTCAGTGACGATCGGCTACCGGAAAAATGCACTCGACGAACTTGCTTCTCGAAGAACCGATTCGAATGGCTTCGATTCTCGAGCCATCAAAGCCTGTGAGTGAAATTCTATTGCTTCAATTTGACTTTGTTTGATTCACTGTAGATTCATGATTTTGGTCAATTTAAGTTGAGGAATTTGTGTATTTTTTGGGAGAGTTGTACTCGTAATGTGCTTGAAGTGTTTGATTTGTGGTTTATGATCTGTTATTTACTAGTAGGTAGTTGTAGCATTACTTTGGTAGTATTTTTGTTCTACGATTTCTGTTACTATATGTAGTTTTTTGTTCTGTTACTATATGTTGAGGAATTTTTGGTTTTTTTGGGGAGAATTGTTTGCGTAATGTGCTTGCAGATGCTATGAGCTTAAAGTGTTTGATTTGTGGTTTATGATCCGTTAATTTACTAGTAATTGTAGCATTACTTCTGTAGTTTTTTTGTTCTACCATTTCTGTTACTAAATGTTATTTTAATTTGTACATCGATTATAGTATTATTTTGTTTTATGCTATTTTTTTTGTATTTTATCGTGGCTTTTTTACTTCGTATTACTTTTTCCCAAACTACTTTGTTGTGTTTTTTTTTTGAGCTGAGGATGGTTATGTTGTTGTTGATCTATTAAATGATGATTTTGCAGACG-TTTTTTCCAGCAATGACGAAGATTGTTGGCACGCTGGGTCCAAAATCACGTTCGGTGGAGATTATCTCTAGTTGCCTTGAATCGGGAATGTCTGGTATGGTATCATATTTTAGCACTAGCTATGGGGGCAGAGTTGATGTCTGTGTAGTCTGTAGTGTTAAATTGGCCATTTGATTAACTAAAATGAATATGTTTGGGAACAAAACTTGAAACTATTGTAAAGGGAAACCTGGAGTACTAACCTCGATTATGTGCAAGTAGGGGAAGGGGCAGACCAGATTGGGTCTTATCTTGCATTCTGCAAGAGGTTGTTTCCGCAGCGTGAACCTGTGATCTCCTGGTCACACACTCACACTGAACATTGAGCCAAGGCTCCAAATGTTGTCACTTGTCAATAAGAATAAAGGGGAACTTCAGAAAACTAAAAAAGAAGCAACTAATGGACATCGAACCAGGGAAGACTTACACTAAGACATCTGCATTTTATATATTTGTGTATATATAGAGACTTTTTGTTGTTACTTTTTTCTTCCAAATAAAAGAATGCCTCTGTAATGTAAGTAAACCTGTGGAAAATATTTTCTCTCAAGTAATTTACCTGTTTTATATTTGTAAATAAAGTTGCTACTTTCATCCTACCAAGTATGGTTTGATATAATTCAGGATGGGAAATGAATTAGACAAATAGACCAGGCTTAACTGAGTGGTAAAATATGGTAGGAATAGATTTAAGTTATATATGCTGTTAGTGTAATGGTTTAGTGAATTTTAACCCGCAATAGCAGGTTAGTTTCCATTTTAATCAGTTTACAAGTTAATATGTATCAAGAGATTTACTTGTAATTACCTTACAGTGACTTGGTTGTGTAAGTATGTTTTACAATTTCAATCCATAAGACTTAAAAACGGTGTTCTTCAAAAGCTTGTTAGTAGCCTTCTGTGTGCTCCTTTGTTTCGAAAGATGCTGAGTGGCTGGAACTAAGCTGATAAAGAACATTGACACCACTGAGCTAATACTTCTGTTGTTGTGTATATTAGTGGCACGATTTGACTTTTCATGGGGAGATGCCGAATTTCACCAAGAGACATTGGAAAATCTAAGGGCAGCCGTCAAAAAATCAAAGAAGCTCTGTGCGGTAAGCTCGGTTGCTCCTGCTATTCCTACCAACTTCTCTGTTTATATAAGTCTGAATATATAACCTCTAAAATTTGTTATGGCCAACTATTCTCCTTCTCTTTTCAGGTTATGCTAGACACTGGTGGTCCTGAACTACAAGTTGTCAATAAGAGCGAACACCCAATTTCACTCCAAGCAGATTCCTTAGTTGTCCTGACACCTGATCAAGATAAAGAGGCTACACCAAATCTACTGCCAATAAATTTTAGTGGCCTATCAAAGGTAATTTCCCTAAGGCAAAAAGTATGTCTTTTCTGGGAGTTTATTGGAACTGCACCTCCAGGCTTCCTATAGCATTACATGCATAAAAGTACATTTTGAGGTTGAATTGAGTCTTATCAGGGGAACCATAGCAGTAGGAGGATATTTTAGACTGGTGTGCTGTGCTATTCACATCATGTTAGTTCTTAAATTCGACCTTCTTACTTTTGTCCAGGGAAATTTAAGTCAGTCAATTCCTTACTTGATTATCAGCAAACAATAGCTATTAATTTGCATGGCGGTTAAGATTGTGGACACTAAAACAAGGTTGCAGTATTGTCCATAGGGGTTGGTAAACAAGAACTGGGGAATCAACTGATGACAAGTTTATCAAAAAGGAAATCCAATTTCAAAAGTTTAGAATGATAGCTGGAAAATTACATCTGAGACTGTAAACGTAGAAGCATACTGATTTTAGTTCCCATCTTTGCATGAACCATGACATGTTCTGATGCTAAATTTTCATGATTTTGCAGTCAGTGAAGAAAGGAGACACTATTTTCATTGGTCAGTACTTGTTCACGGGAAGTGAGACTACCTCTGTGTGGCTAGAGGTGAGGCAGCATTGAAAAACAAATAATTTAAATGTTTGGACCAGCGAGATGATCGTTTTTATTTCATTTCAGAAATGTGAGAAAACTTTGTACCCCATCACTGTTCAATCCCCTCTACCCCTTTCCACAACACACAACGACACCAAAATAATGTGTGTGTGCGCGTTCACGCGTGTCTGTGAGAGAGGGAGAGAGAGCCAAAGCTAGAGTATGGCACTTTGCTCTCACTTGTAATAGCATAGTGAAGTTACTGTTAGAGTTACATGGGCCTTCCGTTTAGACTTTCTGCTGATGCAAGAAATCAATGTGAAAAAGAAGTGCAGCATGTGGTCAATGTTATACTAGTTAAATTTCCGCTCTCAAGAGTTCTCTACAATGCAGGTAACAGAGGTGAAAGGAGAGGATGTCGTTTGCTTGATTAAAAATTCTGCCACCTTGGCCGGACCATTGTACACATTACATGTCTCCCAGATCCGTATTGAGTTGCCAACTCTGACGGACAAAGATAAGAAGGTCTGTTGTTACCTAATATCGAAGTCTATCATTTTGCAATCAGTGTTTCACTCTCTCTAAATTTATGCCACATCATATTGGTCCGAGAGACTCCAAGTATTTTGTGTAGGCAGTACGAAAAACTAAATACTTAAGATTATTTTGGGAAGGACAGTTTGTTTGCTCATTAAGGTTCACATTGTACAGTTTAAAAACAACTCTGCAGAACTTATTGGTCAAATTTCGTTTAGAACTATGATACTCTCTAATGGTAAATTTTTCACTGTATATCTTGTAATTATTTTAGGTTATAAGCACTTGGGCCTTTCGAAACAAAATAGATATCCTTTCACTGTCATATACACGAAATGCTGAAGATGTTCGACATGTAAGGCTATTCTACAGAATTCTACTTTCCACTTTATTAATTTCAACATTTCCCTCACCTACGTAAGATCTGGATTACTCCTATGCGATCACTTCAGAAGTGAAGAAGCATATCTTGTAACAATCTAGTGGTTCTTCATGTTCTTGTTCAGGCTCGTGAATTTCTATCTAAGCTGGGTGATCTTGATCAAACACAGATTTTTGCTAAGATAGAAAATGTGGAGGTTAGTTACCTATTGAATACTCGGGGATTTATTTATGAAAAAAACTGCACAGTAGTTGGTATAAATTTTTCCTTGCATTTGCTTATAGGGAATGGGCAACTTTGATG</genome_strand>
        <mrna_strand>CATTATTCTACTATTTTTCTCTGAACTGAGCTCACTCACCGCAGTTTCAGTGACGATCGGCTACCGGAAAAATGCACTCGACGAACTTGCTTCTCGAAGAACCGATTCGAATGGCTTCGATTCTCGAGCCATCAAAGCCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTTTTTTTCCAGCAATGACGAAGATTGTTGGCACGCTGGGTCCAAAATCACGTTCGGTGGAGATTATCTCTAGTTGCCTTGAATCGGGAATGTCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCACGATTTGACTTTTCATGGGGAGATGCCGAATTTCACCAAGAGACATTGGAAAATCTAAGGGCAGCCGTCAAAAAATCAAAGAAGCTCTGTGCG...........................................................................................................GTTATGCTAGACACTGGTGGTCCTGAACTACAAGTTGTCAATAAGAGCGAACACCCAATTTCACTCCAAGCAGATTCCTTAGTTGTCCTGACACCTGATCAAGATAAAGAGGCTACACCAAATCTACTGCCAATAAATTTTAGTGGCCTATCAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTGAAGAAAGGAGACACTATTTTCATTGGTCAGTACTTGTTCACGGGAAGTGAGACTACCTCTGTGTGGCTAGAG.............................................................................................................................................................................................................................................................................................................................................................................................GTAACAGAGGTGAAAGGAGAGGATGTCGTTTGCTTGATTAAAAATTCTGCCACCTTGGCCGGACCATTGTACACATTACATGTCTCCCAGATCCGTATTGAGTTGCCAACTCTGACGGACAAAGATAAGAAG..............................................................................................................................................................................................................................................................................................GTTATAAGCACTTGGGCCTTTCGAAACAAAATAGATATCCTTTCACTGTCATATACACAAAATGCTGAAGATGTTCGACAT.......................................................................................................................................................GCTCGTGAATTTCTATCTAAGCTGGGTGATCTTGATCAAACACAGATTTTTGCTAAGATAGAAAATGTGGAG........................................................................................GGAATGGGGCACTTTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U320058" ref_strand="+" ref_description="SGN-U320058        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | pyruvate kinase, putative, similar to pyruvate kinase, cytosolic isozyme (Glycine max) SWISS-PROT:Q42806 | chr3:19659858-19663479 FORWARD | Aliases: F8J2.160(evalue: 1e-44, score=177) genbank/nr: gi|7529723|emb|CAB86903.1| pyruvate kinase-like protein [Arabidopsis thaliana] (evalue: 8e-43, score=177)">
      <seq>aaaatggggaatatatgctaaatacttgtggtaggtataaacgtgccttttttgtgcttgtctccaagatgcttcatatcaattttctttcatcccaggtagtgatgcaattcttctaggtgcagagaccctgagaggtctatatcctgttgagactatttccactgttggtaaaatttgtgcagaggcagaaaaggtttataatcaagatgtctattttaagagggctgttaagtgtgtgggagaaccaatgactcacttggaatctattgcttcctcagcggtacgcgctgccatcaaggtcaaggcatctgttattatctgcttcacttcttcagggagagctgcgagattgatagctaagtataggccaccgatgccagttatctgttgtcattcctcgtctcaagacaaaccaactgcgctggacattcagtggtgcatttcaggctaggcagtctcttattgttagaggaattttccccatccttgcagatccaagacatccggctgagtccgcaaatgcaactgatgagtcgatattgaaggttgcactagaccatgggaaaacagctggtgttataaaaccacatgaccgagttgttgttttccagaaagttggtgacgcatctgtggtgaagatcattgagcttgaaaattaggctagtacatctttgttgatccatggctgtaataattgctccggaccgatgtaaatcctctgtaagtaatgcttaccactttaagttgtaagattattatcttttaagacgctgtcatctttaacaaatctctttttttttctctaatccatatgttgtgtaggctgtgaagggtgtcaacctactttgcttcactatttttgtgtatcaaatagtattatatatatcttcaggtaaataagtagttataattgctatcttatgaatggagtagtgatatataagaaccttcttttcttgatgataacaaactcttcataggaagattgtcaaacatttgttctaggagagtgaaatcatcaagaattccagattaattcaagagtaaaccttctattagtgaagtcttatacctttaagggttgtttggttggaaacaagttattcaggattaattgttttccgataaattattcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0143O06.1" temp_strand="+" temp_description="C11HBa0143O06.1  AC220058.1 htgs_phase:3 submitted_to_sgn_as:gi|170933588|gb|AC220058.1| sequenced_by:ivf-caas upload_account_name:china11 Solanum lycopersicum chromosome 11 clone C11HBa0143O06, complete sequence">
        <position start="72959" stop="78087"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73259" g_stop="73445" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="187" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73446" i_stop="74581" i_length="1136">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.822" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74582" g_stop="74677" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="283" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74678" i_stop="74794" i_length="117">
            <donor d_prob="0.823" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="74795" g_stop="74862" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="351" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="74863" i_stop="75038" i_length="176">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="75039" g_stop="75138" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="449" r_length="98" r_score="0.980"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="75139" i_stop="75735" i_length="597">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="75736" g_stop="75795" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="450" r_stop="509" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="75796" i_stop="77086" i_length="1291">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="77087" g_stop="77253" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="510" r_stop="676" r_length="167" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="77254" i_stop="77324" i_length="71">
            <donor d_prob="0.280" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="77325" g_stop="77787" g_length="463"/>
          <reference_exon_boundary r_type="cDNA" r_start="677" r_stop="1140" r_length="464" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0143O06.1" gen_strand="+" ref_id="SGN-U320058" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>1141</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0143O06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U320058" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73259" e_stop="73445"/>
          <exon e_start="74582" e_stop="74677"/>
          <exon e_start="74795" e_stop="74862"/>
          <exon e_start="75039" e_stop="75138"/>
          <exon e_start="75736" e_stop="75795"/>
          <exon e_start="77087" e_stop="77253"/>
          <exon e_start="77325" e_stop="77787"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATGGGGAATATATGCTAAATACTTGTGGTAGGTATAAACGTGCCTTTTTTGTGCTTGTCTCCAAGATGCTTCATATCAATTTTCTTTCATCCCAGGTAGTGATGCAATTCTTCTAGGTGCAGAGACCCTGAGAGGTCTATATCCTGTTGAGACTATTTCCACTGTTGGTAAAATTTGTGCAGAGGTAAATCTTACCTCGTTGCTGTTCTACATATGCCTTATGCCTACCATTGTGAATTCATTGTCAATGGACCCCTCATCGTCTTCTTTGAATCTTCTTTTCCCAGTTATGTCATTTGTTCTTTATACTATAACACTGTAATCATCAACCTTCAGAGTACAATTTCTACTGACTCAATGTCACATTTTTTGTAAGATTGAACAGTATCATATATATGGAGCACAAAGTACACCTAATATCAGAAATAGCAGTTAATAGAATAATGTACTCCTGTGTTGATGCCATATAAAGTAAAAGCTGTGTTGACTTGACGTATTACCATGATTGTGGTCCTACCTTACAAAAAGCACTATTATGTTGAATTCAATGTTTTTTCTTTATTCATAGTAGAACTGTTAAAATTCATTCTGAAGATCAGATAACTTTTCTAAAGCATACCCCCTAAAGTGAAATTGAGTGCGCCAAAAGCACTTTAAAATCATGTATAGTGAAAGTTCTAGATGTTTGAAAGGATTTCAGTTCATAAGTGGTGAAGTCTTAACATACATCAAAGGTACATGGATAGGCTTGCAGTAAGTAATTTTAAATGGCTCATGCTCAGTGCAAGTTGTTGGGGACAATCAATTGCTGCAATGGTGTGAATTAGTCATGCAGCTATGGAAGATATGAATTAGGAAACGTATTTAACTAGACCTATCTTCTCCATCTATTTTTCTTTTAAGGTCCTCTTCGGTGATGAGTTCACTATGCAACGAAGTGAAATACGAAGAGAAGTTCAATCTCTAGCTAAACTCGGATATACCACGGTTCAAGTGTATCTTCTACTACATTTTGTTGGGTAGGAGATGAATAACCTACTAAAGGCTGTGAATTTGGTTAATGACGTGCTAGTTAAGCCAGTACATTTTTCTAGTCAAGTTTGTGTTTAGCCAAAATGGCACAGGAGAGGAACAGATCTTTAACCAATCAATCATAATTTACATTGTGGCATAACCTTATCTTTTTGTGTTTCATATTAGCCTTTTAAAATTCACTTTGTGCCTTCCAAGGCGGCGTCTTGTTGATTTCAATGTAGTCAGATGATAATTCTGAGTTTCTCTTGTATATTTTTACTTCTAAAATTAGTTCCACCATTCCAGGCAGAAAAGGTTTATAATCAAGATGTCTATTTTAAGAGGGCTGTTAAGTGTGTGGGAGAACCAATGACTCACTTGGAATCTATTGCTTCCTCAGCGGTATGTTGTTTCTGTGCTCATGTTAAGTTTTTGGTTAGGTTGGAGGAAACGGCGTCATAGACTTTAAGATTCTAGTATTGACATGAATACTGTCTGTTCTGCTTTTATTTTATTAAGGTACGCGCTGCCATCAAGGTCAAGGCATCTGTTATTATCTGCTTCACTTCTTCAGGGAGAGCTGCGAGGTCTCTCTTTTCTTCTCTCTCTCTCCAAACATCATATTTGCTATCCATTGATGTAAATTGTGTATATCTGTCAAAGACATCCTTACCAGACCTTCTCATCAAAGAATGCCATGACATTCTGAAGTCTATCCTCTAGTGCAGAAAACTCAATTTATAAGCTTTTACTGATGATGCAGATTGATAGCTAAGTATAGGCCACCGATGCCAGTTTTATCTGTTGTCATTCCTCGTCTCAAGACAAACCAACTGCGCTGGACATTCAGTGGTGCATTTCAGGTAATCATGTTTCTTAAAGGACTTCCTTTTTTTTAAAAGAAAAATCAACTTATATGTACATTGATATTACCATCATGTTACCTGTGCCAAATTGAAGTGCATCTTTTACCTATATGTAGAACAAGTTAAGATCCTACTATATGGATTTGCCCCTAACAAAATGTGGTACATCTCCTTTCACTAATTGATGATATATTATTCTTCGGACTAGATGGTTCAATAATGACACATCTTTATTAGAGATAATCTGATTCATCATACCTCCTATGAATGTATGCATTATTTTCTGGGCAGATGCTAAGGCGGTGCTTGCTCGAAAATGAAACCCAATTTTTGCAAAAATTGTGTTTTGAAAAAACACCCAATAATTCTGTTGTGAAGCAACTATTTGAATCCTGTTAGACTGTCTATTTTCCCAACTACTACTTAATTACTCAGACTGATGCTTGGTGTTAGAAAAGGTTTATTGGGATGCTAATAAAGCTCTTCTTCTGATGCTTTCTTTTTTCATTCTTTAATTCATATTATCATAGATGATGTATCATTGGCAAATCGAAAATGAAACTGATTTTATTGCATTGATGACTTAAATGACAGGCTAGGCAGTCTCTTATTGTTAGAGGAATTTTCCCCATCCTTGCAGATCCAAGACATCCGGTATGAAATTTTTTCATCTGTTCCTCCCTAAATAAGTGATTTCTTTCTAGAGCTACTGCAGTTCTGATTAAAAGATTATGTTAACCAACATGGAATTGTGAAGTGCGTGATTAACAATATCGCTTGACCTCATCTTGTATTAGTTCTTCTGTATTATTTTATGAGCAAAATATTAAAGGTAAGAGAATACAATGACAACTACACATCATTCAAGCTAGTTGTGGTCGGCTATATGTATCCTTATTACCCCCTCTGTTCGCTTTATTTGACACTACTTCTTTATTAGTCCGTTTAAAAAAGAATAACACACTGCTTTTATAGCTACACACGTGTTATTGCATGGTTTAGATGACAAGCTTTAAAGTCCCTTTTTCCCTTAACCGTCGTGCCGAGTTGAACTATGACAAACAAAGTGGAATAGAGGTAGTACATATTTTGATCCATTGTTGACTCATTTTATTCCAACATTATATAATTCTGGTTCTCCAACAATAAAATTCTCCACAAACATTAGACCTAATGCGTATGGAACTACATGGGTAAGACTTAATGTCATCTAGTTAGTATATATTGGCCACATGATTTTTTTCAGTTGTGTTTTGTCTTGCTCGAGTTTGCCTTTTCTGAAGACATATTCAGTTAAATAGTCACCAGAAGACTTGCCATAAAGTCATAATCAAAATCTAGTTGAGTAAGTTCTGGTCATTGGAATCTTGTCAGAAAATCTTCAGTCATGGACATCTCGTCAGGAAAGTTCCAATTTTCAGAAACTTGCCAAAAAATCGACTGGCGGAAAATGACTAATATTGATTGAAAAAGGTTTGGAAATAGTGGTGGCTTTAGAACTGTCCCTAAAGAAACCGTTATATGACTAGATCAGACACTGGAAAGGAGTGTATATGCTGCTGGAAGAGTCACGAAAAGAGACAGGGCGATCAGTTACTGGATATATCTTTCTTAAAATGTTAAGAATAAGAAAGAAAAACAAGGTGAATGAAATGGAAGTTACTTATGCTGCTGTTTAGATTGTAGAGCCTTTGTACCATGTGAGTAAAATAAAAAGTTCAAGACGAAAGATAATTTAAGATGATGTATAAATAAGTTGATAAGCATAAAAGATAAAAATGTCATATATAACTTACATTTAATCCGAAAGGGAAAAGAACTTTGGGAAGTGCATGATAGTCCTTCTGGCCTTTATAACTTCATAGTTACTGTAACCTTCTTTCTTCTTGTTAGTGTGTTCGGTGTAGCGTGGCGAGAACATTGACTTTGTTCTTTCCTTCTTCAGGCTGAGTCCGCAAATGCAACTGATGAGTCGATATTGAAGGTTGCACTAGACCATGGGAAAACAGCTGGTGTTATAAAACCACATGACCGAGTTGTTGTTTTCCAGAAAGTTGGTGACGCATCTGTGGTGAAGATCATTGAGCTTGAAAATTAGGCTAGTACATCTTTGTATGTTTCACTCAGAGCATTCTCAAGTTAACAGAATGCATGAAAACCATCTAATGGAGCTATAAAACCAGGTTGATCCATGGCTGTAATAATTGCTCCGGACCGATGTAAATCCTCTGTAAGTAATGCTTACCACTTTAAGTTGTAAGATTATTATCTTTTAAGACGCTGTCATCTTTAACAAATCTCTTTTTTTTTCTCTAATCCATATGTTGTGTAGGCTGTGAAGGGTGTCAACCTACTTTGCTTCACTATTTTTGTGTATCAAATAGTATTATATATATCTTCAGGTAAATAAGTAGTTATAATTGCTATCTTATGAATGGAGTAGTGATATATAAGAACCTTCTTTTCTTGATGATAACAAACTCTTCATAGGAAGATTGTCAAACATTTGTTCTAGGAGAGTGAAATCATCAAGAATTCAAGATTAATTCAAGAGTAAACCTTCTATTAGTGAAGTCGTATACCTTTAGGGGTTGTTTGGTTGGAAACAAGTTATTCAGGATTAATTG-TTTCGGATAAATTATTCCA</genome_strand>
        <mrna_strand>AAAATGGGGAATATATGCTAAATACTTGTGGTAGGTATAAACGTGCCTTTTTTGTGCTTGTCTCCAAGATGCTTCATATCAATTTTCTTTCATCCCAGGTAGTGATGCAATTCTTCTAGGTGCAGAGACCCTGAGAGGTCTATATCCTGTTGAGACTATTTCCACTGTTGGTAAAATTTGTGCAGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAAAAGGTTTATAATCAAGATGTCTATTTTAAGAGGGCTGTTAAGTGTGTGGGAGAACCAATGACTCACTTGGAATCTATTGCTTCCTCAGCG.....................................................................................................................GTACGCGCTGCCATCAAGGTCAAGGCATCTGTTATTATCTGCTTCACTTCTTCAGGGAGAGCTGCGAG................................................................................................................................................................................ATTGATAGCTAAGTATAGGCCACCGATGCCAG--TTATCTGTTGTCATTCCTCGTCTCAAGACAAACCAACTGCGCTGGACATTCAGTGGTGCATTTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAGGCAGTCTCTTATTGTTAGAGGAATTTTCCCCATCCTTGCAGATCCAAGACATCCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAGTCCGCAAATGCAACTGATGAGTCGATATTGAAGGTTGCACTAGACCATGGGAAAACAGCTGGTGTTATAAAACCACATGACCGAGTTGTTGTTTTCCAGAAAGTTGGTGACGCATCTGTGGTGAAGATCATTGAGCTTGAAAATTAGGCTAGTACATCTTT.......................................................................GTTGATCCATGGCTGTAATAATTGCTCCGGACCGATGTAAATCCTCTGTAAGTAATGCTTACCACTTTAAGTTGTAAGATTATTATCTTTTAAGACGCTGTCATCTTTAACAAATCTCTTTTTTTTTCTCTAATCCATATGTTGTGTAGGCTGTGAAGGGTGTCAACCTACTTTGCTTCACTATTTTTGTGTATCAAATAGTATTATATATATCTTCAGGTAAATAAGTAGTTATAATTGCTATCTTATGAATGGAGTAGTGATATATAAGAACCTTCTTTTCTTGATGATAACAAACTCTTCATAGGAAGATTGTCAAACATTTGTTCTAGGAGAGTGAAATCATCAAGAATTCCAGATTAATTCAAGAGTAAACCTTCTATTAGTGAAGTCTTATACCTTTAAGGGTTGTTTGGTTGGAAACAAGTTATTCAGGATTAATTGTTTTCCGATAAATTATTCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U337008" ref_strand="+" ref_description="SGN-U337008        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | pyruvate kinase, putative, similar to pyruvate kinase, cytosolic isozyme (Glycine max) SWISS-PROT:Q42806 | chr2:15346201-15350332 FORWARD | Aliases: F1O11.21, F1O11_21(evalue: 2e-41, score=166) genbank/nr: gi|77553678|gb|ABA96474.1| Pyruvate kinase, barrel domain [Oryza sativa (japonica cultivar-group)] (evalue: 8e-40, score=167)">
      <seq>caccgatgccagttttatctgttgtcattcctcgtctcaagacaaaccaactgcgctggacattcagtggtgcatttcaggctaggcagtctcttattgttagaggaattttccccatccttgcagatccaagacatccggctgagtccgcaaatgcaactgatgagtcgatattgaaggttgcactagaccatgggaaaacagctggtgttataaaaccacatgaccgagttgttgttttccagaaagttggtgacgcatctgtggtgaagatcattgagcttgaaaattaggttgatccatggctgtaataattgctccggaccgatgtaaatcctctgctgtgaagggtgtcaacctactttgcttcactatttttgtgtatcaaatagtattatatatatcttcaagtaaataagtagttataattgctatcttatgaatggagtagtgatatataagaaccttcttttcttgatgataacaaactcttcataggaagattgtcaaacatttgttctaggagagtgaaatcatcaagaattcaagattaattcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0143O06.1" temp_strand="+" temp_description="C11HBa0143O06.1  AC220058.1 htgs_phase:3 submitted_to_sgn_as:gi|170933588|gb|AC220058.1| sequenced_by:ivf-caas upload_account_name:china11 Solanum lycopersicum chromosome 11 clone C11HBa0143O06, complete sequence">
        <position start="74759" stop="77999"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75059" g_stop="75138" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="80" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75139" i_stop="75735" i_length="597">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75736" g_stop="75795" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="81" r_stop="140" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75796" i_stop="77086" i_length="1291">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="77087" g_stop="77239" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="141" r_stop="293" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="77240" i_stop="77324" i_length="85">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="77325" g_stop="77371" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="340" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="77372" i_stop="77473" i_length="102">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.716" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="77474" g_stop="77700" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="341" r_stop="567" r_length="227" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0143O06.1" gen_strand="+" ref_id="SGN-U337008" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0143O06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U337008" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75059" e_stop="75138"/>
          <exon e_start="75736" e_stop="75795"/>
          <exon e_start="77087" e_stop="77239"/>
          <exon e_start="77325" e_stop="77371"/>
          <exon e_start="77474" e_stop="77700"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACCGATGCCAGTTTTATCTGTTGTCATTCCTCGTCTCAAGACAAACCAACTGCGCTGGACATTCAGTGGTGCATTTCAGGTAATCATGTTTCTTAAAGGACTTCCTTTTTTTTAAAAGAAAAATCAACTTATATGTACATTGATATTACCATCATGTTACCTGTGCCAAATTGAAGTGCATCTTTTACCTATATGTAGAACAAGTTAAGATCCTACTATATGGATTTGCCCCTAACAAAATGTGGTACATCTCCTTTCACTAATTGATGATATATTATTCTTCGGACTAGATGGTTCAATAATGACACATCTTTATTAGAGATAATCTGATTCATCATACCTCCTATGAATGTATGCATTATTTTCTGGGCAGATGCTAAGGCGGTGCTTGCTCGAAAATGAAACCCAATTTTTGCAAAAATTGTGTTTTGAAAAAACACCCAATAATTCTGTTGTGAAGCAACTATTTGAATCCTGTTAGACTGTCTATTTTCCCAACTACTACTTAATTACTCAGACTGATGCTTGGTGTTAGAAAAGGTTTATTGGGATGCTAATAAAGCTCTTCTTCTGATGCTTTCTTTTTTCATTCTTTAATTCATATTATCATAGATGATGTATCATTGGCAAATCGAAAATGAAACTGATTTTATTGCATTGATGACTTAAATGACAGGCTAGGCAGTCTCTTATTGTTAGAGGAATTTTCCCCATCCTTGCAGATCCAAGACATCCGGTATGAAATTTTTTCATCTGTTCCTCCCTAAATAAGTGATTTCTTTCTAGAGCTACTGCAGTTCTGATTAAAAGATTATGTTAACCAACATGGAATTGTGAAGTGCGTGATTAACAATATCGCTTGACCTCATCTTGTATTAGTTCTTCTGTATTATTTTATGAGCAAAATATTAAAGGTAAGAGAATACAATGACAACTACACATCATTCAAGCTAGTTGTGGTCGGCTATATGTATCCTTATTACCCCCTCTGTTCGCTTTATTTGACACTACTTCTTTATTAGTCCGTTTAAAAAAGAATAACACACTGCTTTTATAGCTACACACGTGTTATTGCATGGTTTAGATGACAAGCTTTAAAGTCCCTTTTTCCCTTAACCGTCGTGCCGAGTTGAACTATGACAAACAAAGTGGAATAGAGGTAGTACATATTTTGATCCATTGTTGACTCATTTTATTCCAACATTATATAATTCTGGTTCTCCAACAATAAAATTCTCCACAAACATTAGACCTAATGCGTATGGAACTACATGGGTAAGACTTAATGTCATCTAGTTAGTATATATTGGCCACATGATTTTTTTCAGTTGTGTTTTGTCTTGCTCGAGTTTGCCTTTTCTGAAGACATATTCAGTTAAATAGTCACCAGAAGACTTGCCATAAAGTCATAATCAAAATCTAGTTGAGTAAGTTCTGGTCATTGGAATCTTGTCAGAAAATCTTCAGTCATGGACATCTCGTCAGGAAAGTTCCAATTTTCAGAAACTTGCCAAAAAATCGACTGGCGGAAAATGACTAATATTGATTGAAAAAGGTTTGGAAATAGTGGTGGCTTTAGAACTGTCCCTAAAGAAACCGTTATATGACTAGATCAGACACTGGAAAGGAGTGTATATGCTGCTGGAAGAGTCACGAAAAGAGACAGGGCGATCAGTTACTGGATATATCTTTCTTAAAATGTTAAGAATAAGAAAGAAAAACAAGGTGAATGAAATGGAAGTTACTTATGCTGCTGTTTAGATTGTAGAGCCTTTGTACCATGTGAGTAAAATAAAAAGTTCAAGACGAAAGATAATTTAAGATGATGTATAAATAAGTTGATAAGCATAAAAGATAAAAATGTCATATATAACTTACATTTAATCCGAAAGGGAAAAGAACTTTGGGAAGTGCATGATAGTCCTTCTGGCCTTTATAACTTCATAGTTACTGTAACCTTCTTTCTTCTTGTTAGTGTGTTCGGTGTAGCGTGGCGAGAACATTGACTTTGTTCTTTCCTTCTTCAGGCTGAGTCCGCAAATGCAACTGATGAGTCGATATTGAAGGTTGCACTAGACCATGGGAAAACAGCTGGTGTTATAAAACCACATGACCGAGTTGTTGTTTTCCAGAAAGTTGGTGACGCATCTGTGGTGAAGATCATTGAGCTTGAAAATTAGGCTAGTACATCTTTGTATGTTTCACTCAGAGCATTCTCAAGTTAACAGAATGCATGAAAACCATCTAATGGAGCTATAAAACCAGGTTGATCCATGGCTGTAATAATTGCTCCGGACCGATGTAAATCCTCTGTAAGTAATGCTTACCACTTTAAGTTGTAAGATTATTATCTTTTAAGACGCTGTCATCTTTAACAAATCTCTTTTTTTTTCTCTAATCCATATGTTGTGTAGGCTGTGAAGGGTGTCAACCTACTTTGCTTCACTATTTTTGTGTATCAAATAGTATTATATATATCTTCAGGTAAATAAGTAGTTATAATTGCTATCTTATGAATGGAGTAGTGATATATAAGAACCTTCTTTTCTTGATGATAACAAACTCTTCATAGGAAGATTGTCAAACATTTGTTCTAGGAGAGTGAAATCATCAAGAATTCAAGATTAATTCAAGAGTAAAC</genome_strand>
        <mrna_strand>CACCGATGCCAGTTTTATCTGTTGTCATTCCTCGTCTCAAGACAAACCAACTGCGCTGGACATTCAGTGGTGCATTTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAGGCAGTCTCTTATTGTTAGAGGAATTTTCCCCATCCTTGCAGATCCAAGACATCCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAGTCCGCAAATGCAACTGATGAGTCGATATTGAAGGTTGCACTAGACCATGGGAAAACAGCTGGTGTTATAAAACCACATGACCGAGTTGTTGTTTTCCAGAAAGTTGGTGACGCATCTGTGGTGAAGATCATTGAGCTTGAAAATTAG.....................................................................................GTTGATCCATGGCTGTAATAATTGCTCCGGACCGATGTAAATCCTCT......................................................................................................GCTGTGAAGGGTGTCAACCTACTTTGCTTCACTATTTTTGTGTATCAAATAGTATTATATATATCTTCAAGTAAATAAGTAGTTATAATTGCTATCTTATGAATGGAGTAGTGATATATAAGAACCTTCTTTTCTTGATGATAACAAACTCTTCATAGGAAGATTGTCAAACATTTGTTCTAGGAGAGTGAAATCATCAAGAATTCAAGATTAATTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U320059" ref_strand="+" ref_description="SGN-U320059        Tomato 200607 #1 [8 ESTs aligned] arabidopsis/peptide: | Symbol: None | pyruvate kinase, putative, similar to pyruvate kinase, cytosolic isozyme (Glycine max) SWISS-PROT:Q42806 | chr2:15346201-15350332 FORWARD | Aliases: F1O11.21, F1O11_21(evalue: 2e-12, score=67) genbank/nr: gi|23308151|gb|AAN18045.1| At2g36580/F1O11.21 [Arabidopsis thaliana](evalue: 3e-10, score=67)">
      <seq>aaggttgcactagaccatgggaaaacagctggtgttataaaaccacatgaccgagttgttgttttccagaaagttggtgacgcatctgtggtgaagatcattgagcttgaaaattaggctagtacatctttgtatgtttcactcagagcattctcaagttaacagaatgcatgaaaaccatctaatggagctataaaaccaggttgatccatggctgtaataattgctccggaccgatgtaaatcctctgtaagtaatgcttaccactttaagttgtaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0143O06.1" temp_strand="+" temp_description="C11HBa0143O06.1  AC220058.1 htgs_phase:3 submitted_to_sgn_as:gi|170933588|gb|AC220058.1| sequenced_by:ivf-caas upload_account_name:china11 Solanum lycopersicum chromosome 11 clone C11HBa0143O06, complete sequence">
        <position start="76823" stop="77703"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77123" g_stop="77397" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="275" r_length="275" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="278" polyA_stop="295"/>
      <MATCH_line gen_id="C11HBa0143O06.1" gen_strand="+" ref_id="SGN-U320059" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>275</cumulative_length_of_scored_exons>
        <coverage percentage="0.932" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0143O06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U320059" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77123" e_stop="77397"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGTTGCACTAGACCATGGGAAAACAGCTGGTGTTATAAAACCACATGACCGAGTTGTTGTTTTCCAGAAAGTTGGTGACGCATCTGTGGTGAAGATCATTGAGCTTGAAAATTAGGCTAGTACATCTTTGTATGTTTCACTCAGAGCATTCTCAAGTTAACAGAATGCATGAAAACCATCTAATGGAGCTATAAAACCAGGTTGATCCATGGCTGTAATAATTGCTCCGGACCGATGTAAATCCTCTGTAAGTAATGCTTACCACTTTAAGTT</genome_strand>
        <mrna_strand>AAGGTTGCACTAGACCATGGGAAAACAGCTGGTGTTATAAAACCACATGACCGAGTTGTTGTTTTCCAGAAAGTTGGTGACGCATCTGTGGTGAAGATCATTGAGCTTGAAAATTAGGCTAGTACATCTTTGTATGTTTCACTCAGAGCATTCTCAAGTTAACAGAATGCATGAAAACCATCTAATGGAGCTATAAAACCAGGTTGATCCATGGCTGTAATAATTGCTCCGGACCGATGTAAATCCTCTGTAAGTAATGCTTACCACTTTAAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U331760" ref_strand="+" ref_description="SGN-U331760        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | mRNA capping enzyme family protein, contains Pfam profile PF03291: mRNA capping enzyme, large subunit | chr3:19377997-19380772 FORWARD | Aliases: T25B15.21(evalue: 3e-30, score=128) genbank/nr: putative(evalue: 6e-29, score=130)">
      <seq>agggaaaccaaacattgttcctagttgtattagatcagaaaattacatgatcactttcgaggttgaggaagaaaagtttcctttctttggtaagaagtatcaattgaagtttgcaagtgacatctctgctgaaacccaatgtttggttcattttccaagcctgctcaggttggcgagagaggctggccttgagcacacggagattcagaacttgacagatttttatgatgataacaggtaatagattgtaacttacaacttcaccatcatggctgtttcattttgcttgtttaccatcttaatctatcatatgaaattacctgaatttttatcacatcattgatgaagccatgaaggtaaagtgatgattctcttgaagtttaactttaaaatgtgatagtttattgcatagggaatttatattcttcatggcaatgcacatgccaaaaagtagtgtatacatgccttgcatagtactcagatggatgtattattgggtgggaacccaacttcagatcaacttttatcatgttgtgaagtgttcagtctttgtctcaccaagtacaccataatatttcctagcaagtgcggaagaaaatggtttcccatcacttgatcatttttcctaccttttaagaatttaatgggtcacttatagtatactgattttatttttctaattatgtctacttttccttttcttttggttgttaaaatttattgatttctttagaaggtttatgagggttgttagctggacaggaataactccagcatggaattattgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0143O06.1" temp_strand="-" temp_description="C11HBa0143O06.1  AC220058.1 htgs_phase:3 submitted_to_sgn_as:gi|170933588|gb|AC220058.1| sequenced_by:ivf-caas upload_account_name:china11 Solanum lycopersicum chromosome 11 clone C11HBa0143O06, complete sequence">
        <position start="81850" stop="79901"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81553" g_stop="81479" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="75" r_length="75" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81478" i_stop="81388" i_length="91">
            <donor d_prob="0.628" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81387" g_stop="81295" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="76" r_stop="168" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81294" i_stop="80821" i_length="474">
            <donor d_prob="0.901" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80820" g_stop="80201" g_length="620"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="788" r_length="620" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0143O06.1" gen_strand="-" ref_id="SGN-U331760" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>788</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0143O06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U331760" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81553" e_stop="81479"/>
          <exon e_start="81387" e_stop="81295"/>
          <exon e_start="80820" e_stop="80201"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGAAACCAAACATTGTTCCTAGTTGTATTAGATCAGAAAATTACATGATCACTTTCGAGGTTGAGGAAGAAAAGTATGGAATCCACTTGGCACCCACTTATGTTTGTTCTTAATGCGTCTCTTTTGAGCGATTAATTATGTTTATGTTGTGAATTGGATTTCAGGTTTCCTTTCTTTGGTAAGAAGTATCAATTGAAGTTTGCAAGTGACATCTCTGCTGAAACCCAATGTTTGGTTCATTTTCCAAGCCTGCTCAGGTTAATGCAGCAATATTCCCTGTCAAATTTCAATTGGGTTTGTTGTGTTCTGTTACCTTCACCCCACCCCATATCTCTCTCTATATTTCACTTGAGACCCCTTTGTTGAACTCCACTTTTCTTAGTAAGCCCTGCCATCAGGGAGGAACCCTGACATGCCTCCAATCATGATCCACTATGATAGTTCTATTTTTCCAATGTTCAACTATTTGAAATCACGCCTTTTCAGATATGGGAATAACCAAACTTGTTCTCGTAATGTGAATTTGGGTATTCTATTTCACAATGTTCTACAGATCTAGTAGGTTATCTGTATGCTTCTTTGGTTTGTTTGTGTGATTTTTTGAGTTTCAGATGTCAACATTTGTGCTCTTGCATTTCCAAAATGGGAAGAAATATTTTAGCTTAGCTTATTTTCTTATCCTGTCAATGTAAATAAATCCTATAATTAACTTGTAAAGTCATATTCCTCAGGTTGGCGAGAGAGGCTGGCCTTGAGCACACGGAGATTCAGAACTTGACAGATTTTTATGATGATAACAGGTAATAGATTGTAACTTACAACTTCACCATCATGGCTGTTTCATTTTGCTTGTTTACCATCTTAATCTATCATATGAAATTACCTGAATTTTTATCACATCATTGATGAAGCCATGAAGGTAAAGTGATGATTCTCTTGAAGTTTAACTTTAAAATGTGATAGTTTATTGCATAGGGAATTTATATTCTTCATGGCAATGCACATGCCAAAAAGTAGTGTATACATGCCTTGCATAGTACTCAGATGGATGTATTATTGGGTGGGAACCCAACTTCAGATCAACTTTTATCATGTTGTGAAGTGTTCAGTCTTTGTCTCACCAAGTACACCATAATATTTCCTAGCAAGTGCGGAAGAAAATGGTTTCCCATCACTTGATCATTTTTCCTACCTTTTAAGAATTTAATGGGTCACTTATAGTATACTGATTTTATTTTTCTAATTATGTCTACTTTTCCTTTTCTTTTGGTTGTTAAAATTTATTGATTTCTTTAGAAGGTTTATGAGGGTTGTTAGCTGGACAGGAATAACTCCAGCATGGAATTATTGC</genome_strand>
        <mrna_strand>AGGGAAACCAAACATTGTTCCTAGTTGTATTAGATCAGAAAATTACATGATCACTTTCGAGGTTGAGGAAGAAAA...........................................................................................GTTTCCTTTCTTTGGTAAGAAGTATCAATTGAAGTTTGCAAGTGACATCTCTGCTGAAACCCAATGTTTGGTTCATTTTCCAAGCCTGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGCGAGAGAGGCTGGCCTTGAGCACACGGAGATTCAGAACTTGACAGATTTTTATGATGATAACAGGTAATAGATTGTAACTTACAACTTCACCATCATGGCTGTTTCATTTTGCTTGTTTACCATCTTAATCTATCATATGAAATTACCTGAATTTTTATCACATCATTGATGAAGCCATGAAGGTAAAGTGATGATTCTCTTGAAGTTTAACTTTAAAATGTGATAGTTTATTGCATAGGGAATTTATATTCTTCATGGCAATGCACATGCCAAAAAGTAGTGTATACATGCCTTGCATAGTACTCAGATGGATGTATTATTGGGTGGGAACCCAACTTCAGATCAACTTTTATCATGTTGTGAAGTGTTCAGTCTTTGTCTCACCAAGTACACCATAATATTTCCTAGCAAGTGCGGAAGAAAATGGTTTCCCATCACTTGATCATTTTTCCTACCTTTTAAGAATTTAATGGGTCACTTATAGTATACTGATTTTATTTTTCTAATTATGTCTACTTTTCCTTTTCTTTTGGTTGTTAAAATTTATTGATTTCTTTAGAAGGTTTATGAGGGTTGTTAGCTGGACAGGAATAACTCCAGCATGGAATTATTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U346222" ref_strand="+" ref_description="SGN-U346222        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | mRNA capping enzyme family protein, contains Pfam profile PF03291: mRNA capping enzyme, large subunit | chr3:19377997-19380772 FORWARD | Aliases: T25B15.21(evalue: 5e-43, score=171) genbank/nr: unknown(evalue: 5e-41, score=171)">
      <seq>tgaacgagagcagcagggtttttgtgtgggttttagaggcgatgatgatgatggcgaattcattcccgattcacagacctgccgagtcaactcaccatcgacttctcgatttcgtcaaaaatgtgcttatcggtatcttcgtctccccatatgccactgtatgtgatatgtattgtggaaaagtacctgatgtggagaagtgggatgaagctcaaattggtcactatattggcattgatgtggaagcttcgggagtgaatgaagtgaaggaagcgtgggagagtcagcggaaggcttacacatctgagttcattgagctcgatctttgtattgaagatatagaatcattttggaaggacaaagaaaagccagccgatgttgttttctgcatgcacaatttacaggcgtgctttgatagtgaagagaaagccaggaggctattgcataatgtatccactttgctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0143O06.1" temp_strand="-" temp_description="C11HBa0143O06.1  AC220058.1 htgs_phase:3 submitted_to_sgn_as:gi|170933588|gb|AC220058.1| sequenced_by:ivf-caas upload_account_name:china11 Solanum lycopersicum chromosome 11 clone C11HBa0143O06, complete sequence">
        <position start="85368" stop="82618"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85068" g_stop="84911" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="158" r_length="158" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84910" i_stop="84611" i_length="300">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84610" g_stop="84532" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="159" r_stop="237" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="84531" i_stop="83808" i_length="724">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="83807" g_stop="83713" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="332" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="83712" i_stop="83137" i_length="576">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="83136" g_stop="83065" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="333" r_stop="404" r_length="72" r_score="0.958"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="83064" i_stop="82978" i_length="87">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="82977" g_stop="82918" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="464" r_length="60" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0143O06.1" gen_strand="-" ref_id="SGN-U346222" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>464</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0143O06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U346222" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85068" e_stop="84911"/>
          <exon e_start="84610" e_stop="84532"/>
          <exon e_start="83807" e_stop="83713"/>
          <exon e_start="83136" e_stop="83065"/>
          <exon e_start="82977" e_stop="82918"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAACGAGAGCAGTAGGGTTTTTGTGTGGGTTTTAGAGGCGATGATGATGATGGCGAATTCATTCCCGATTCACAGACCTGCCGAGTCAACTCACCATCGACTTCTCGATTTCGTCAAAAATGTGCTTATCGGTATCTTCGTCTCCCCATATGCCACTGTATGTACTCTTTACTCTCACTACTATGCTTCACTTGTAATGTTATGGCGGAGATACACCTTCGTTTTGCTCAAAATCTCTACTTGTAGTTGAAAATTCACTTGATATGTATGGTTACTTGATACCTGTGGGAGGTTGCAGCGTATTAGGTAGAATTAGTCAATTTTTATGTTTTTTTTTTTAAAAAAAAACATGAATCAAGTAAAATGCAGTTTCTAGAATGTAGAACTCATAAATTCAAAATTCTAGTTCGGCGGGTGTTGATGTATATGGAAAATTTCTGATACATGTATTATGTAGGTATGTGATATGTATTGTGGAAAAGTACCTGATGTGGAGAAGTGGGATGAAGCTCAAATTGGTCACTATATTGGCATTGGTAGGATGATCATTACTCTTCTGTTTCATTTTTTTTCTTAAGAAGAGCATCTTGAATAATTTTATGGGTGCTTGTTACCTCTGGACATGCTTACCTTAGGGGAGGAGGCATAGATGTGCAATTGAATCCCGTTTGTTGAAAAATTATACTATTGAAATAGGGAAAAATGATATCTTTTTGATTCTCTTGGCATAAGAATTTCTTTTTGAATCCCCTTGTTAGAATTACCAGCTAGTACCTCTCACCAACAAAGTTACCGGGTAACTCTGTCCACCAAAGGCTTTAATGTATGCGAATAACTGACTTAGCGTTAAGCCTGAGATACACAAACACATTGTATATATATGTGCAAACACACAATACACTTGCACATATATACTCATACATAGTATCTATTTTATTTTGTATGACACTCTTCCTCTTTTGTGATTCTAAAGAAAATTGACATGTCTTTGTCATCAGAAACTTTTTAATTTTGTCATTTTTTTATTTTCCCTTAACGCCATGCTTTTACTGATATCAATAATATGTTTAGGAACAAGATACTAAAGGTGCTTTGGTATATCACACACACACACACACACACACACATATAGCTTATGCATAAAAAATCTTTCTTTCTTAAACTCCGCATACAGTCAAACTCCCTCATATTAATTGAACCTGAGAGAAGTACATAGATACCCACTGATTGTAGCTTAAAATTTGGAACTGTGTTGAATAGATGTGGAAGCTTCGGGAGTGAATGAAGTGAAGGAAGCGTGGGAGAGTCAGCGGAAGGCTTACACATCTGAGTTCATTGAGCTCGATCTTTGTATTGTGAGTTCAACAACTATTCCTTTTCTGGACGTATTTTATTTGGTCTATGCTAATTGAACTTGTGAATCCAGTATTCTGTTGGTTTTCATTATCAGATTCTGTTTGGCAGTTGGTTTGCTGCTTTATATTTTACTCTCGATCAATTTCTGTTGGCTGTTTTAAGTAAAATAGCCAAGAGCGTTGAAGTGTTATCTACCTCACCTCCAAGGCTGAAATGAGCTTTTCCTGTGAAAGATTGAATCCTCAACCCCTCCCCACTTAACTGATATAGTTCGCATTTCAAGTAGTCAGTGTGCAAGTACCTATTTGGTCTCTTGCCGTTCCTTTTGTTTTGTCGAAATTTGTTTTAGTGCCTTGATTCTTCTTATCCTTTTTCTTATTTGTGTGACTGGTTGCTTTTCAGCAATTCAGAGCAGTGTTATTGAGTAAATTGTTTGCTCCTGTTAATATTGCCTTTATGTGTGATGTCATCAACAGAAAGCCGAACTGTATGGATGTTTATTGTGTTCTCAGTTATGAGGTTTGTTGTATGTTTCTGTCTAGTTGGCAATTATATGAGTGTACATTTTTGTGCAGGAAGATATAGAATCATTTTGGAAGGACAAGGAAAAGCAGGCCGATGTTGTTTTCTGCATGCACAATTTACAGGTTAGCTGTTCTTGTACTAGTGTCTTCTTTATATACACTTCTAGCATCTGTTAGTTGCATTGACATTAATCTGATATTTACTTGCAGGCGTGCTTTGATAGTGAAGAGAAAGCAAGGAGGCTATTGCATAATGTATCAGCTTTGCTT</genome_strand>
        <mrna_strand>TGAACGAGAGCAGCAGGGTTTTTGTGTGGGTTTTAGAGGCGATGATGATGATGGCGAATTCATTCCCGATTCACAGACCTGCCGAGTCAACTCACCATCGACTTCTCGATTTCGTCAAAAATGTGCTTATCGGTATCTTCGTCTCCCCATATGCCACT............................................................................................................................................................................................................................................................................................................GTATGTGATATGTATTGTGGAAAAGTACCTGATGTGGAGAAGTGGGATGAAGCTCAAATTGGTCACTATATTGGCATTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGGAAGCTTCGGGAGTGAATGAAGTGAAGGAAGCGTGGGAGAGTCAGCGGAAGGCTTACACATCTGAGTTCATTGAGCTCGATCTTTGTATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGATATAGAATCATTTTGGAAGGACAAAGAAAAGCCAGCCGATGTTGTTTTCTGCATGCACAATTTACAG.......................................................................................GCGTGCTTTGATAGTGAAGAGAAAGCCAGGAGGCTATTGCATAATGTATCCACTTTGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U346942" ref_strand="+" ref_description="SGN-U346942        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, ; expression supported by MPSS | chr5:1290013-1291064 REVERSE | Aliases: T32M21.120, T32M21_120(evalue: 9e-83, score=303) genbank/nr: gi|15238192|ref|NP_196072.1| 3-oxoacyl-[acyl-carrier-protein] synthase - like protein [Arabidopsis thaliana] gi|11280850|pir||T48448 3-oxoacyl-[acyl-carrier-protein] synthase-like protein - Arabidopsis thaliana gi|7406456|emb|CAB85558.1| 3-oxoacyl-[acyl-carrier-protein] synthase-like protein [Arabidopsis thaliana](evalue: 7e-81, score=303)">
      <seq>agagtttttcactgattttgtaaaggttgctcaagatgaagggcggcattttactctacttgcagcacggcttaaggaactaggttcattctatggagctttacctgctcatgatggcctgtgggattcagccattgctacttctagcgatctgttggctcgtttggctattgaacactgtgttcatgaggccagaggacttgatgtgattccaacaacaatatcccgtttccgcaatggtggtgatagtgaaacagctgagttactggagaatgtggtgtatccagaagaaataactcactgcgctgcaggagtcaaatggttcaagtatctttgcgtaagatcaaaaaatccaaatctgagtgatattccttcagaagaaactagtaatgtagacaatgaagtgattcaaaagttccattccactgtgaggacatatttcagagggccattgaaacctccttttaatgagcaagcaagaaaagctgctggatttggtccacaatggtatgaacctcttgctgttaaagatttcacagtagtatgaaggtctctcctcgctggtagaacgttgtagcagataccctgcagaattagtcgaggtgtgcaaaagttgccccaaacattacggtttattccaaaaaccaaagctcctcctctggtttctgtaaaactatatttcaaaattctcaggatattaagcataaatggtacactagattattgaggggattcttcaaaatagatcaacactatttgtatccttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0143O06.1" temp_strand="+" temp_description="C11HBa0143O06.1  AC220058.1 htgs_phase:3 submitted_to_sgn_as:gi|170933588|gb|AC220058.1| sequenced_by:ivf-caas upload_account_name:china11 Solanum lycopersicum chromosome 11 clone C11HBa0143O06, complete sequence">
        <position start="87459" stop="89655"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87759" g_stop="87948" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="190" r_length="190" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="87949" i_stop="88777" i_length="829">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88778" g_stop="89355" g_length="578"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="767" r_length="577" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0143O06.1" gen_strand="+" ref_id="SGN-U346942" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>768</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0143O06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U346942" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87759" e_stop="87948"/>
          <exon e_start="88778" e_stop="89355"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGTTTTTCACTGATTTTGTAAAGGTTGCTCAAGATGAAGGGCGGCATTTTACTCTACTTGCAGCACGGCTTAAGGAACTAGGTTCATTCTATGGAGCTTTACCTGCTCATGATGGCCTGTGGGATTCAGCCATTGCTACTTCTAGCGATCTGTTGGCTCGTTTGGCTATTGAACACTGTGTTCATGAGGTTCTCTCTTCATCTCTTACACCTTATAAAAGAAATCTGGATATTTATGAATGAAGTAACAAAAAGATATTTTCTTTGTGAAGTCTCAAATGATTAAGCTTGAACACCACTTTATGCCTTTCCTTTTGTCAATAATTTTGATGATAAAATCCATAAGCCTCTAAAATAAGGGTTTATTCCAGAAAATTCCTTTGCACTATGGAATGCGTCCATTTTAACGTGAAACATTCATAATGTAAGAGCTGACTGTAACTTGTAGTTTATACTAATGTGAAACAACCCAGAATTGAACAAACTCAAGAATTTAAGGCCCCTCATTCATGAGTTTTTTCAACTATTTATTGTCACTTTAATTCCGTTATGTTACATAAATCTATAACATGATTACAGTTAACAGTCTGCAAACTAGAGCTATCTGGTGCCACTTGTCATCATATTCATGATCATAACAGGGTGGATTTTAACAAGCAGCTGCAATTTTGCAATTGTGATATCATTATAACCTCAGTTATTTTGATGAACTAGGTTATAGCCTCAGTGATTTGTTTATTCCTATTTCCTAACATGACGTTCACCGCCGACACTAGCGATCCTCGAGTAGTTTTCCAGTTTAACATGATAACCAGGGTGTAATAAAGTGATTTCATGTGGTTAGACGTATTAAGACATGTATGATAGATATCATAAGTCTTAAATATAAGCATAACTTAAAAGTATTAATCAAAGGCTTGTTTTATGCAGTTCATCATCATTCTACTTTTGTAGAATCACTTTCACTTTTTTTTATATTGATACTAGGTTGATGACTTCACATTTTCTGATAATGTAGGCCAGAGGACTTGATGTGATTCCAACAACAATATCCCGTTTCCGCAATGGTGGTGATAGTGAAACAGCTGAGTTACTGGAGAATGTGGTGTATCCAGAAGAAATAACTCACTGCGCTGCAGGAGTCAAATGGTTCAAGTATCTTTGCGTAAGATCAAAAAATCCAAATCTGAGTGATATTCCTTCAGAAGAAACTAGTAATGTAGACAATGAAGTGATTCAAAAGTTCCATTCCACTGTGAGGACATATTTCAGAGGGCCATTGAAACCTCCTTTTAATGAGCAAGCAAGAAAAGCTGCTGGATTTGGTCCACAATGGTATGAACCTCTTGCTGTTAAAGATTTCACAGTAGTATGAAGGTCTCTCCTCGCTGGTAGAACGTTGTAGCAGATACCCTGCAGAATTAGTCGAGGTGTGCAAAAGTTGGCCCAAACATTACGGTTTATTCCAAAAACCAAAGCTCCTCCTCTGGTTTCTGTAAAACTATATTTCAAAATTTTCAGGATATTAAGCATAAATGGTACACTAGATTATTGAGGGGATTCTTCAAAATAGATCAACAACTATTTGTATCCTTG</genome_strand>
        <mrna_strand>AGAGTTTTTCACTGATTTTGTAAAGGTTGCTCAAGATGAAGGGCGGCATTTTACTCTACTTGCAGCACGGCTTAAGGAACTAGGTTCATTCTATGGAGCTTTACCTGCTCATGATGGCCTGTGGGATTCAGCCATTGCTACTTCTAGCGATCTGTTGGCTCGTTTGGCTATTGAACACTGTGTTCATGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAGAGGACTTGATGTGATTCCAACAACAATATCCCGTTTCCGCAATGGTGGTGATAGTGAAACAGCTGAGTTACTGGAGAATGTGGTGTATCCAGAAGAAATAACTCACTGCGCTGCAGGAGTCAAATGGTTCAAGTATCTTTGCGTAAGATCAAAAAATCCAAATCTGAGTGATATTCCTTCAGAAGAAACTAGTAATGTAGACAATGAAGTGATTCAAAAGTTCCATTCCACTGTGAGGACATATTTCAGAGGGCCATTGAAACCTCCTTTTAATGAGCAAGCAAGAAAAGCTGCTGGATTTGGTCCACAATGGTATGAACCTCTTGCTGTTAAAGATTTCACAGTAGTATGAAGGTCTCTCCTCGCTGGTAGAACGTTGTAGCAGATACCCTGCAGAATTAGTCGAGGTGTGCAAAAGTTGCCCCAAACATTACGGTTTATTCCAAAAACCAAAGCTCCTCCTCTGGTTTCTGTAAAACTATATTTCAAAATTCTCAGGATATTAAGCATAAATGGTACACTAGATTATTGAGGGGATTCTTCAAAATAGATCAAC-ACTATTTGTATCCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U316396" ref_strand="+" ref_description="SGN-U316396        Tomato 200607 #1 [21 ESTs aligned] arabidopsis/peptide: | Symbol: None | dihydrolipoamide S-acetyltransferase, putative, similar to dihydrolipoamide acetyltransferase (E2) subunit of PDC (Arabidopsis thaliana) GI:559395; contains Pfam profiles PF00198: 2-oxo acid dehydrogenases acyltransferase (catalytic domain), PF00364: Biotin-requiring enzyme, PF02817: e3 binding domain; supporting cDNA gi:5881964:gb:AF066080.1:AF066080 | chr3:19371184-19377365 FORWARD | Aliases: T25B15.141(evalue: 0, score=689) genbank/nr: gi|15231159|ref|NP_190788.1| dihydrolipoamide S-acetyltransferase (LTA3); nuclear gene encoding mitochondrial protein [Arabidopsis thaliana] gi|11257430|pir||T49099 dihydrolipoamide S-acetyltransferase precursor - Arabidopsis thaliana gi|4678949|emb|CAB41340.1| dihydrolipoamide S-acetyltransferase precursor [Arabidopsis thaliana](evalue: 0, score=689)">
      <seq>gatagcggaataataataagcatatagaagttgaagaaagcaagagcgtggtggatctgtgaatgatcgatggcgctctctcgacttcgtcatccgttgattttccgagctccgtcgctactccgagctcgccgtcttctcgccgccggtccttgtaactcctccacactccgatcgctccatcatgttcctggggtgctgaatcaaattcctgatgtggatgcttcttcattaaggcttttaaatttccgcctgctcagtgaagtacatgtcgtaccatctaagctacaaagtggtgttcggcacttctcgtcagctgaggctccttcatatacagaggtgggaatgccagctttgtcccctacaatgactcaaggtaatatagcaaaatggataaagaaagagggggacaagattcaagcaggggatgtactatgtttgatagagactgataaagcaacgcttgagtttgaaactcttgaagaaggtttccttgcaaagatattggtccctgaaggaacaaaagatgtaccggtgggacagactatagcaattacggtggaagaagcagatgacatacaaaaagtccctgctaccgttggtggtgcatcagaggttaaaaatcaagcatcttctcagacagatgcagcaaggggagatggggctacagaagtgagtcctgcgaatatcagctcatctgaacttcctccacatctgatccttgatatgccagctttgtccccaaccatgaaccaaggtaacatttttaaatggaggaaaaaggaaggtgacaagatagaggttggtgatgttctctgtgagatagaaactgacaaagcaactcttgagcatgaaagtcttgaagaaggattcttggccaaaatactggcacctgaaggttcaaaagatgtggctgttgggcagcctattgcaatcatggttgaggatgaaaatgatattgaagctgtgaggacatcgatcagcggcaacaatgtggttaaggaagaaaagccggtcagtcatgatgtcacaactgaagttagaactcagacaacaggtttcaatagaatcagtccagctgctaaggtattaattatggaacatggtttagatgcatcatcaattccagcatctggtcctcgtggtaccttgttaaagggagatgttcttgctgcattgaagtctggaaagggatcaagcaacaattcatcagttgggaaggcaactccatctcctcctcaggtcaaccaacaagctactccaacaaagtcacttgatttaaaatctgatggacagcaaaaggatgcttatgaagatttacccaatagtcaaattcgcaaggtgatagcagcaaggttattggaatctaagcaatctacccctcacttgtatttgtccacagatgttatattggactctcttctctccttcagaaaggagcttaaagaaaagtatgatgttaaagtctctgtgaatgacattgtaatcaaagtggttgcagcaacattaagaaatgtaccaggagcaaatgcttactgggatgatggaaaaggtgaggtggtgctttgtgattctgtcgatatatctgttgcggttgccactgaaaagggcttgatgaccccaattatcaggaatgctgatcaaaaatccatatcctcaatatctgcggagatcaaggagcttgctggaaaggcacgagctggaaagcttaaacctaatgaattccaaggtggcactttcagcatttcaaacttgggcatgtttccagtggatcggttttgtgcaattatcaaccctcctcaggccggtataattgctgttggtaggggcaataaagttgtcgaacctgtggttggtgctgacggaattgagaaaccagctgttgttaacaagatgagtttgacattatcagctgatcatcgcgtctttgatgggaaggttggaggtgcgttcgtttcagcattgtcatctaacttcagtgacatcaagaagcttctactttaatacggatgaagtgtctgggaacaaaatatcctacaggacatgtcacctgtgcaggcggcgtagttgttttttctgatgatagtttgcctctttcagatctcaagcttgtattaatggtgccatttttgttcttgaagatagaaatgatttgaggtccataaaattggactagttccaataccaatgatactaccatttcttctgagatgccaagtttatgacacttcacagttccatctgttctccctgtaaagttgtacaataggggtgcctcaatattttttaccaaataaaaagctgattttttcctctcttgctcataaaaaaaaatttttcctttacttttacagaccatgtaacagctaaaccaaatttcttttgtttaatcaccaaaagaaaattattgctcaatacatattaactgataaatataaaactcaatgatgagaattgacaagga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0143O06.1" temp_strand="-" temp_description="C11HBa0143O06.1  AC220058.1 htgs_phase:3 submitted_to_sgn_as:gi|170933588|gb|AC220058.1| sequenced_by:ivf-caas upload_account_name:china11 Solanum lycopersicum chromosome 11 clone C11HBa0143O06, complete sequence">
        <position start="106987" stop="89050"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106688" g_stop="106504" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="185" r_length="185" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="106503" i_stop="104831" i_length="1673">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104830" g_stop="104780" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="236" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104779" i_stop="103537" i_length="1243">
            <donor d_prob="0.664" d_score="1.00"/>
            <acceptor a_prob="0.719" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103536" g_stop="103488" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="285" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="103487" i_stop="103412" i_length="76">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103411" g_stop="103378" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="319" r_length="34" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="103377" i_stop="100997" i_length="2381">
            <donor d_prob="0.727" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="100996" g_stop="100947" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="369" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="100946" i_stop="100847" i_length="100">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="100846" g_stop="100802" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="370" r_stop="414" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="100801" i_stop="100666" i_length="136">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="100665" g_stop="100592" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="488" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="100591" i_stop="100351" i_length="241">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="100350" g_stop="100281" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="489" r_stop="558" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="100280" i_stop="97192" i_length="3089">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="97191" g_stop="97000" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="559" r_stop="750" r_length="192" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="96999" i_stop="96901" i_length="99">
            <donor d_prob="0.940" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="96900" g_stop="96856" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="751" r_stop="795" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="96855" i_stop="96744" i_length="112">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="96743" g_stop="96670" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="796" r_stop="869" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="96669" i_stop="96232" i_length="438">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="96231" g_stop="96162" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="870" r_stop="939" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="96161" i_stop="95943" i_length="219">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="95942" g_stop="95541" g_length="402"/>
          <reference_exon_boundary r_type="cDNA" r_start="940" r_stop="1341" r_length="402" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="95540" i_stop="93879" i_length="1662">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="93878" g_stop="93818" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1342" r_stop="1402" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="93817" i_stop="93642" i_length="176">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="93641" g_stop="93597" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="1403" r_stop="1447" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="93596" i_stop="93513" i_length="84">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="93512" g_stop="93429" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1448" r_stop="1531" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="16">
          <gDNA_intron_boundary i_start="93428" i_stop="91217" i_length="2212">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="17">
          <gDNA_exon_boundary g_start="91216" g_stop="91140" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="1532" r_stop="1608" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="17">
          <gDNA_intron_boundary i_start="91139" i_stop="91069" i_length="71">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="18">
          <gDNA_exon_boundary g_start="91068" g_stop="91006" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1609" r_stop="1671" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="18">
          <gDNA_intron_boundary i_start="91005" i_stop="90723" i_length="283">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="19">
          <gDNA_exon_boundary g_start="90722" g_stop="90652" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1672" r_stop="1742" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="19">
          <gDNA_intron_boundary i_start="90651" i_stop="90570" i_length="82">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.931" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="20">
          <gDNA_exon_boundary g_start="90569" g_stop="90509" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1743" r_stop="1803" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="20">
          <gDNA_intron_boundary i_start="90508" i_stop="90248" i_length="261">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="21">
          <gDNA_exon_boundary g_start="90247" g_stop="90187" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1804" r_stop="1864" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="21">
          <gDNA_intron_boundary i_start="90186" i_stop="90042" i_length="145">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="22">
          <gDNA_exon_boundary g_start="90041" g_stop="89961" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1865" r_stop="1945" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="22">
          <gDNA_intron_boundary i_start="89960" i_stop="89866" i_length="95">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="23">
          <gDNA_exon_boundary g_start="89865" g_stop="89350" g_length="516"/>
          <reference_exon_boundary r_type="cDNA" r_start="1946" r_stop="2464" r_length="519" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0143O06.1" gen_strand="-" ref_id="SGN-U316396" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>2461</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0143O06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U316396" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106688" e_stop="106504"/>
          <exon e_start="104830" e_stop="104780"/>
          <exon e_start="103536" e_stop="103488"/>
          <exon e_start="103411" e_stop="103378"/>
          <exon e_start="100996" e_stop="100947"/>
          <exon e_start="100846" e_stop="100802"/>
          <exon e_start="100665" e_stop="100592"/>
          <exon e_start="100350" e_stop="100281"/>
          <exon e_start="97191" e_stop="97000"/>
          <exon e_start="96900" e_stop="96856"/>
          <exon e_start="96743" e_stop="96670"/>
          <exon e_start="96231" e_stop="96162"/>
          <exon e_start="95942" e_stop="95541"/>
          <exon e_start="93878" e_stop="93818"/>
          <exon e_start="93641" e_stop="93597"/>
          <exon e_start="93512" e_stop="93429"/>
          <exon e_start="91216" e_stop="91140"/>
          <exon e_start="91068" e_stop="91006"/>
          <exon e_start="90722" e_stop="90652"/>
          <exon e_start="90569" e_stop="90509"/>
          <exon e_start="90247" e_stop="90187"/>
          <exon e_start="90041" e_stop="89961"/>
          <exon e_start="89865" e_stop="89350"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATAGCGGAATAATAATAAGCATATAGAAGTTGAAGAAAGCAAAAGCGTGGTGGATCTGTGAATGATCGATGGCGCTCTCTCGACTTCGTCATCCGTTGATTTTCCGAGCTCCGTCGCTACTCCGAGCTCGCCGTCTTCTCGCCGCCGGTCCTTGTAACTCCTCCACACTCCGATCGCTCCATCAGTACGCTTTCCTCTTCACATTTTTATTGTCATTTTCTGAATCGTTGTAATTTGATAGCTCAAAAGCCTGTAATCGATTATACTTGTTGTAATATGGATTATAAATTGCTTAATGTTCGCGTTGATTTTAGATATAAGCTCAAAAAACAAGGAGAAATTAGAAATGATTATATATATGTGTGTGTGTTGGCTGCGCGTTCGGATTATGTAGCTATAGGCATTTGAGATTGAATGATATTTGGTTAATTAGGCTAGAAGAAGCAAATAAGTGTGTGGTGTAATGCATTATTCAGTTTTGCTCCATTTTAATGAACTGTTTGGACTTTGGAACCTTGAATATTAGTTTGATTTATGGTGTAAGTTACTTGGTTTGCTGTTGAGTAATTTGAAGATTTTCTTCTAGTTAGAGGAGTTATTTTTTAAGATCACATGTAGCAGTTTGAGGGAGTTCTTCATCTAGTAATCTTTCTTCCAAAGGTTCCTATCGTCATGTTTAGGATGTGGATTGGGGGTTCATCATGGTGGAAAATTTCAGTCGTGAAAGAAGAAGATTGTGATGTTTTTAGGTAATATTCATTCAAACTAAGGGTATACAGTGCATTTCCAAAGGCATGCTAATATGTCAATTTTAAGAAAATCAAGGCATGCTAATATTTCTGATTATGAATAAAAGTAGGCTTAGATGGAAAAGAGGATTGCAGGATTGGTTATACTTTGTGAGAAATGAAATGGAACTGGGTGCCTCATTGGTTGCAGTATTTCTTGTAAATTGAAAGCTTGTACTTTTTATAGAAAAAAGATATCAAAGATGAAGTAATAAAAGGAGTAACAAGAAAAGCAAGCTCAAAAAAAACAAGAATGGAAGGCGTTGGAGTGCTCTAAACTTTGAACTTGTGGATAAATTTGGTGGGCAAGACAACTATATTTAGTGACAAAGAAGGAAAGATCTTCCTGTTGATTCTTTGTTTCTTTCCTCATAAGCCTTTTGTGCATGTATATTAAGTGCTTTTTTAGTCCATATTTGTTCAGTGATAAACAAAAGGAGAATCATTTTTTTTTATGTTGGGTTGAATAACGCAGCATTGAGATTGCACCCCTTCAATATAGTTTAAATAATTTCATTATTTAATAAAGAAAGTGGGGTGATGCACCAATGTTTTTAGTCAAGTACTTCTATTGATGTATGCCAGCAAAATACTGGAGTAATTGCTGTCTTATTATCAGTCATTTTGCATACGAAATTTGGACAAGAGACCTCTACTTTCACTGAATTCCCCAAGTTCCAATGATTGTAATGTTTGTTCGGACTTTTTAAGAAGATGCATTCTTTCTTGAGCACTTTGGCAGAATTTAATGTGTATTTTGATGTTTATTATTTCCATGCACCTAAGAGTGTGGACTAGTGGTTAATAAAAATGAGGTAAATAGTGGAGATCAAGGAAAAAAGCATGTAGGTGATTTCTTCGCATCTGCCTAAGCCTTGGTGGGCAAAGTTACCCGATAGTTGGTTCTATACAAGCTGGCGGTAGCAGGTACCTAGTAGAATAGTCAAAATACGAATAGCCTTGCCCGAAAACCACCATCATAAAAATGATGCTCATTTTTCCCTTGTTAATATTTATGAAATACATTTATTAGATTTGCAAATTTTCATTAATCATTTATTGGCTGCAGTGTTCCTGGGGTGCTGAATCAAATTCCTGATGTGGATGCTTCTTCATTAAGGTCTGATGTTAGTCCATTCTAGTGGTTTACGGAATTGTGCCATCTCAACTTAAAAGGTGTAACTGACATTTTTTTTAATAAGGTGTAACTGACATAATTTCTTCTCAAAGAAAAGTTCACTAACACAATTTTTCCTTTCCCAGAGAACTTTTGTTTAGTATTAAGATGAATGTCTTTTCTTGTCCTATAGAAACTCCAACCCAACTCAATAGTTTTCCAGATTTCATGTGGTTGAGTAGGGCAGTTGTGCAATGATGGATACGTTTCCTCAGAAGGGCCTAGCATAATGACTAATGTTTCTGCCTCCCTATCATGTCTGTGGTGGCATGAGTCCCACATTGATGTTTTTCTTTTGCATAATTTATAGATGCTGGATATGAGATGATACTCCCTCTATCTCAAAGAGAAACTTTATCTATACACTCCTTGATATGGTTTAAGATCTTGTTGAGAAAAAGAAGGTTATTTAGGGACATATATTCCTTAAAGTTCAAATGTAAGGACGTCGAGATGATGCAAAGTTACAAGAAGATGGAAAAGGAATGAACAATAACAAAAGCTTCACCTGAAGAGTCCTAAGATCTGACTACATTAACTTCTTTTATATGTGTGATGAAGAAACTGATTTATCTAGTAAACCTGACTATCACTCTGTTGTCAATCATGTCCAGAAAGATCCTTCTTCCAAATGATGGCTCATGGCCATAAGTCTTCAGCATTCACATGTATGATTGCAGACAATTTGAGTCTCTGTCTCTCTCTCCACGACTACCAACCTATTGCTATCTGACTGGGATATAAGCTATGAATAAGATGATGGCGTATCTTCAGAAATTTATGGCTGAAATGGATGTGATAAAATTTTAGGGACTCCTCAATTAAATTGTTCTATTTTACTATGGCCACTAACTGGATTTCTCATGTCATATGCTCAGTGAATAAAATTTTTGAGAGATTGATATTTTGATCTGATAACCATCTAAATTTTGACTTTTAGCTGTAGTTTTTAGCTTGGAGTGCCAATACTAATAGTAGCATAGTTGCTTAGTTAGTCTTTGTCTTTGCATATTACAATCTTACTGATTATCATATGGCTTCTTTAGACATTAAGTTGCATCAGTGTCATATTTTCATTGAACTAAATGCAATTATTAATTATTAATCAGCTGAAGGTAGTTTAATCTGCTCCATAATTGTTTTTTCTCAAAACATATTCTGTTCAATGACTTTGAAGTTTGGTCAGGCTTTTAAATTTCCGCCTGCTCAGTGAAGTACATGTCGTACCATCTAAGGTTAGTTGCAACACATGTCTTTCCATTAAATTTCATTACTTTATGTTTCCTTGATTCAATGGTGGAAATGTTGCAGCTACAAAGTGGTGTTCGGCACTTCTCGTCAGCTGGTAAGCACACTATACAAATGATGTTGCTCCCACCCAATGCTGTTATCTTTCCAGATATTTATAGATTGCTTTCAGTAACTTCCACCATCATATCTTGAATTTCAAGTGCAACACGGAATGAAAAATTAGTAAGGGGCCCATCTGATAAGAGCATATAAAAAGAAAAGTGGAATACAACTTAAGAAACTCTTTCAACTTCTAACATCTAAGAGAAATTGCATGAAACACGTGATAAGTCCTTTCCCGTTGGTCATGTTAGTAACATTATTTGTAGGAGATCGTTGCTTTGATCATGTTCTTATATCTAACTTGAACTCCTCATTTATACTGTTTTACTATAACAAGTAGCCCCTTCATATGTCATCATTTCATTGCATAATAGGGATGTGTTTCTTGGAGCTCCCATGTTTTTTTAAAATAATAAATAAATCGAAATATAAAGAGATGGAGCCAGTGCAAACTAAGCTAAAGATAGCGCACAATGGAAAGAATGATTCATATAGGTGATATCTACTAGTTGGACATAGGTTTTAGCGTGTTAGAGAACTTCTAAAACTATTACTCCCTCCACCTCATTATGTGGCACCCTTTGACTTGGCATAATGTTTAAGAAAAAAAGGAAGACTTTTGAAACTTATGGTCTAAAACATTCCTTGGATATTTGTGTGGTTGAGATTCATTTCATTAAGGGTAAAAAGGAAATTTCAAAATTAAATTGTTTGTAATTATAGTAAGTAGACATTCTCTTTGGGACGGATTAAAAATGACAGGGTTCCATATAAAATTTGATAGAGGGAGTATTATAATTACTATCTCCGTATCAAAATAAGTGCACTTCCCTTTTTAGTTTGTACAAAAGAATGCCTCTATCTATTTTCGGTAACTCCTTGAACCCCATATTTTACATGGCATGTTTATTACTAGAAGATTAGAGGGCAAAGGGACCAACAGCCTGAAGATTAGAATCCAATGCCTTAGTTTACTTTATTTTTGGTGTAAACAGGATATTGTAGGGTATAAAGTAGACATAGTTGACTTCATAGGTAACCTTAGTTTACTTTATTTTTGGTGTAAACAGGATATTGTAGGGTATAAAGTAGACATAGTTGACTTCATAGGTAACTTGTAAAGTTTTTCTGTTGAGTAGTCCTCACTGAGGAAAGTGCACATACCATGTGGATTGTAAATGTTCCTATCATCTTTTGTTGATGACTTTTTTGTGAATACAAAGTTGCCTTTACTCCAAAAAATAAAATAGTTTCAAAGGGCATTTTTCAACATTACACACATCTTTAGTTTAAGACCACAAAATTCAAAAGTCTCCCTTATTTCTTAATCTTAGTGCCTAGTCAAACTAAGATAGTTAAACTGAAACAGAGGGAGTATTAGTTGTATATACTTTATTTATTTTTCACTTTCATTTTTATTTGGTATGATGATGATATGAGTTGAGCTTAAATGGAGAGGTGAGGATTCATATAGCCGACCCCGATATCGCCGACCGTGACTTGCTTGGGACTGAGACATAGTTGTTGTTTGAATGATAAAGAGATGGAATGATAATTCACATTCTCCGACCTGATGCTCAAATCTGATGTTTCGGAGACTTCTGGTTTATAGAATGTATTTACTTTTAAGTGTTATCTTGTACTTCAAATATTCCAGTGGCTGTTCCATTACCCTGATTCATTTGGGAAGACATAAGCCTCTTTAAATTTATACATGTGTTTGTTATGTGGTTCAACACTTTTGATCACCTCACCTGCTACAGATAATTTTAAAGAAGCCCGACAAGGCAATTTTGGTCCTAGCTGATGCATGCTAAATCTGAGGTGTTTCCTATTCAGCAAATGTTAGATTACTAAATGTGTATTTTGTGTTCTCCAAATATATGATTTCGTCATCTGCTTATCAGTTTAGTATATGCTATTTGGACGTTGAATCACGTGTATTAACTCAATTCTTCTTCATCTAGTTCAGTGGCCCTGGAAAGTGTAAGAATGTTTAGCCTTAAGATAGAAAATCTGGCTAATGGTGCATTTAGTTGTAACATAATTCAGAAACATTAAAAAGCAGTTAAATCTCTGACTTCCATGTGCGATGGGATAGTCTTTTAGCTTCTAAGGTGTTAGGCATGTCATGCTCTCCAAGATGTACTGGAGAGAATGTCTTATTCCATTAAGATATATATATATTTCCCCTTCGGTTAATTTATTTTCTATTTTAGAAAGACAGTGGAAAGATATTTGGTGACCTTCAGACACGTTATACAACTTTTATCTTGAACTGTGTGAGAATCTACTGATAATATGGGATCTTATGTGGCAGAAATGAGGTCTTTCTTTGTTAAATGTTATAATACTTATTTCCTACTATTGCAGAGGCTCCTTCATATACAGAGGTGGGAATGCCAGCTTTGTCCCCTACAATGGTAATCTTAGTGGCATTATTTCTATGAATGATGAAGTTTTCTGCTTATCATTTCCTTATTATTGTGGAAATTCTTAACTTACATGTTCATCTCACTGCAGACTCAAGGTAATATAGCAAAATGGATAAAGAAAGAGGGGGACAAGGTCAGTTGATTTCATGGCTACCGAAAGTTAAATTAGTACAATCTTTTAGACAAAGATAATGCCTGCTGAAGTATAAAGGCTCAACAACTAACATTTCTATTTTATTACACTTTGTTAAATTCGGATTTCCTAACAGATTCAAGCAGGGGATGTACTATGTTTGATAGAGACTGATAAAGCAACGCTTGAGTTTGAAACTCTTGAAGAAGGGTAAGCCTATATTCCAATTGTGCTGTATTTGCTTAGAACTTAAAAAGAGAAGATTTTCTTTTGACAAGGTAAGTAGTGTTCTTTTATGATGTTATTGCTTTTCTTTACGTACTATGTGATTAGTTTTCTTCCTGATGCTCTTGCTGTTCATAAATGCCTGAAGTACTCACTCTAACCATCCTGTTAACGGATGCACTTCTTTAATGTAATTGGTTTTGTTGTTTGGGGATATTATTTGCAGTTTCCTTGCAAAGATATTGGTCCCTGAAGGAACAAAAGATGTACCGGTGGGACAGACTATAGCAATTACGGTAATAAGAGTTCTTAGATATTTCTCCTGCCACTTTTCGTCTTTATTTTCTATTTTGTGATTATCTCCATTCAGTCAAGCACCACAAAATATAAGTGATAATGCTGCATTTTTCTCTTTTTTCTTTCGCTTCTTCTCTGGAATTCTTTGCTGCAAAATGGAAAAAGAAGTCTGTGTTACGCCCCAAGAATTTTTAATCATTTTTTTTTTAAGTTCCTATTATTCTTTTTGTTCGCATTAACAGTAGGTAGCTTAAATGGAATTGTATAGTATCTCTACTTTTTTGGTGTAAACAGCTTTGTATAGATGATATAGAGCATATTATAGATTTGATAGGAAATCTATAATTATTCCTTTTTGGAGGTAGCTAGCATACAGGTATGCTGAAGAATTCAACCTCACCAGTTTCAATAAAAAAAAAAAGGTAACTTAAAAATTCTCATTTTGGGAAGTGGCTGTTCTCTCTGAAAAGTTGTCAACTCCTCCCCCGTTTTAAAATAGTTGTATTCTAACAAAAAAGGCACAGGCTTCTTTGGTTTGCCTATCAGAGACCTGACAGTTGGAAGACTGACACTCACTAGAACAACAAACCGATAGATCAAAGCAGGTTGAAATTGGTGTAAATATGAAAAATTGAAGACTAAGTACATTCCCTCGTGGAAATTGTAGTATTTGTTTTTCTGCAAGTATTGTAGCTACTATCTGATAAAATCAAATATTTTTACATTCTAAGCTTTTCCTGCTAATAAGACTACACATTGCTCTCTTTCTTCAGAAGTTTACTAAAGCCACCATGCTATAAGTATCAGCCAAAGTTCTCTAATTATCAGTCCTTTGTGTCGTGTTTTTGAAGGAAAGCCATACTACCTATGTTTATCTATACAACATTGCTCTTTAAGCCCTAAACCACGAAATGGGTTTGCATTGAACTGTTGAAAGTCAAGCAACCTTGCATTTTTTCTCTCCAATCAGAAAGCATCGTCCTTTTATTGAATTCCAACAGTGTTTGAGCAATTGGAACGGAAGTCGAGAGTTCGTTACACAGGATTGACTGCTACATACAAATTGCAGAGATGATAGAAATGAAATGGCAAGAGGTAGGCAGTCAATGATTCTCTGTTAAGTGATAGTATAGAGGCCTACTTAATGGAGGGGATTTAAGGCCTGATTGTAAATCAGTTTGGAAGACTGAAGCACCTGAGAAGATGGTGTGTTTGAGATGATATATTACGTAGGATGCTGTCAGCAAACAATCTGAGGAAGAGAACGAATATATCCTGGACAGGAACCACCTCATAGTACACTGTAGTTTGCATCAGATATATGGGCATTCATATTTTCCTTGTTTAACTATATTGGGTTTTACTAGATAGTGGCAAATGCTGTAAGAAGTAGTGTTTTTTTTTTGAATCTAAAAAGAGGATGGAGGCGAGAAAAAGAAGATACGGAAGACAATTTCATTGTGCATTCTTGATGATTTGGTTGGAAAGAAGTATATGAATCTTATAAGGATTTAAAAGACCAGCATGGACTCTAAAGGAAATCCTTTTGCTTCACTTGTATTTTGAATTAAATAAATTTTTTCTTTTTGTGCCAATAGTTGGTTAGTTTTTTTGTGATAGCCGAATATTATATATGCTGTCACTTTGAAGCCATCTTGGTTAGAAATTAATTAGAAGTCTTGACTTATCTAAAAGAGTCCTTGTATATCAAAAGATAATTATGAATTTTGATGGATTAGGACACTTCCGTCCTTTGTACTAAAAAAGAATGGTATCAGGTTCTCCTCTTCAAGTATGAACTTGGAGGAGAAAGTAATGTATGCATCACGCAATATATTGATAGTGTCCCGCCTTGAGAGACAACTGCTAATTTCTTTTGTTGTCTTCTTTCTTTCTTTTAAGAGCAGAACTTTTTTCGTTGGTATTCTCGACTGAGTTTAACTCCATTTGTAATGAAGGAAAGGTTTCATTAAAAAAGCATCTAGAAGATGCAAAAGAAGTTGTCTTAGCTCCAATACATGAGAAGAGACTATGATAGGATTAGGGAGCTAATAAAGACCAAAAATTGGCCAGAGCTGTTTACAGGGGTTCAATTTCTCCAGCAAAACAAGTTAAGCAAACATCTAGCTTTTAGGGAGTGTAATGGCATTGAATTTCGTTTTAAACATTTCAGTTCCTTTCTGTCCAAAAAACACTAAAAGATTCTTGGAGGATTATCAATAGATCTTCTTGGTGGCTTTGCCGACTCTCCATAAGCACCAAGTTGAATATGCTTCTTTTTTTTTTTTAAATTATTGCGAGTGGGGTGACCCAGAAGTCCCCAAAAGATGTTCTAGCTACGAAGAACGAGAGGAAGAAAAAGGTAAAAAAAAAGGAAATGGAGGAAGGCAAATGTATAATATCTTCAACTCCATTTATTTGCGGACCAACTCTATCCAGGAGCAAACTGGTAGTCTCTGTTACAATGTTTCTATGTCGTGAAAGAGTTTACCAACTAGGAGGATTTTTTGTCAAATGAATCTTACTGTAGCAGTTCTGTAAAGAATTCCCTGACATGATTGAGATCGAATGGAAGTAGCAAAGATGAAAAGGCAGGAAAGTATTTTAAGCTCAAACTGAAGTTAATAAGAGTGCTTACTGAATACTTTAGGAGGTAAACTCAAGTGGAAACAAGACAGCCTTCTAATAGAAATGGATCCTGGTTTGGAAGGATCTTTATAGACTGCCTAATCCCAGTTTTGTTTTCCTTTTTACTTAAATATAGCCATAACGACAATAATTATCTCATGGCTAATTAGACATGATTGAATGCTTTAAATCTACTAGCAAGTTCTTGTCTTTTGGTTCCTCAATCAGCAGCTCATTTCACTAGAATTAACTAATTTCTCTACCTTAATATGAACTAAACTATGTTCCTCGTCAAAGTTAGGATGACTGTCACCTTTAGATTAAATTCTTGCCATGTTTTTCTGCCTCACTATATTGGATGTCTCAGAGCCTTCTCATTTCCTACATGCTTAGCTTAATCGGGTTGTGTAGACTGCCATGGGCATCTCTTATTGTAAATATTTTTCGCTAATTTGAGTAGGTGGAAGAAGCAGATGACATACAAAAAGTCCCTGCTACCGTTGGTGGTGCATCAGAGGTTAAAAATCAAGCATCTTCTCAGACAGATGCAGCAAGGGGAGATGGGGCTACAGAAGTGAGTCCTGCGAATATCAGCTCATCTGAACTTCCTCCACATCTGATCCTTGATATGCCAGCTTTGTCCCCAACCATGGTATGGAAAGCTAATAATGGACTCTTTAATTTCCATGCTATACTTGTTTCCTTTACCTGTCAATGCTGATGATATCTTTGTTTGAATTCTTACCTATAGAACCAAGGTAACATTTTTAAATGGAGGAAAAAGGAAGGTGACAAGGTTGGTGCTGCATTATAAGTGACTAGTGAATTTTCACAAATACCCCAGACACTGGGCAGGGATGGACTAAAACAGCATGTGTAACTATTATCTTCTTTTTATTTTGACACAGATAGAGGTTGGTGATGTTCTCTGTGAGATAGAAACTGACAAAGCAACTCTTGAGCATGAAAGTCTTGAAGAAGGGTAAACTTTCCCATTACATTTTAAATAAGATGTTTAATTGCAAGAAAATAAGATACTGTTAGAGATTATAACTATTACTATTTTTTACTGTACTTTCTATAAGGTAATTATTTCTTAGGACTTTCTAGTTATCCAGAAAAGCAGCCTCAAAATATTGAAGGAAGAATCCTTCCTAGCCTCTTCATATTGACTTTCTATGGCGGAGGCCTTCTTAGTTACATCTACTGCTGTTTATTTCTGGGAGTATGTGAGGTTGTTTTTGTTACGGTTTTATCATGTTTTGAGTCTTTGAAGTAGAAGACATTCCATTCCATGTGTATCCTGTTTGCTCTTGTAGATTATGAAACTATTTCCCTCTAATTCAGTGTTGGTTTTACAATTTGATGTGTTTGTTTTCTTTGGCCACAAAAAAATATTTTTATCTGGTGTGATTTCTAGATTCTTGGCCAAAATACTGGCACCTGAAGGTTCAAAAGATGTGGCTGTTGGGCAGCCTATTGCAATCATGGTAAGTTGCTGATGCTCCTCTCTTTTTTTCACCTTCTGTGAGAAATTTAGAACTTTCTGTTGTCTTAACCATTAGAAGATGCAAATCAGTATATTCAGATTTAGGGTAGGGACTTGTTGTAGTTCTTTTTTTTTTTTAAAATATTTTATCTGGTATAGTTACTCTGCTATGGATTATAACTCTTAGCATTTTGTGGAATAAATACTTCTTTTTTGCAAGGTTGAGGATGAAAATGATATTGAAGCTGTGAGGACATCGATCAGCGGCAACAATGTGGTTAAGGAAGAAAAGCCGGTCAGTCATGATGTCACAACTGAAGTTAGAACTCAGACAACAGGTTTCAATAGAATCAGTCCAGCTGCTAAGGTATTAATTATGGAACATGGTTTAGATGCATCATCAATTCCAGCATCTGGTCCTCGTGGTACCTTGTTAAAGGGAGATGTTCTTGCTGCATTGAAGTCTGGAAAGGGATCAAGCAACAATTCATCAGTTGGGAAGGCAACTCCATCTCCTCCTCAGGTCAACCAACAAGCTACTCCAACAAAGTCACTTGATTTAAAATCTGATGGACAGCAAAAGGATGCTTATGAAGATTTACCCAATAGTCAAATTCGCAAGGTACTATGAACTACCATCAGCAGTTATTTAACACTTTTACCTTATTATACTTATTAAATGATAGAGCCTTAATTGTGTTGTTTAGGTATTTTATGTTATATACTATCATATTTGCTAACACATTGAGAAAAAAATGAAGGACAATCTTATTTCTTGGATGTAATGATCAGTTTCATTTATCTATGTAATACGAGTCTCTTTCTTAAATTTTTAAATGTGGGTGAGAACATAACTTGGTTTAAGAAAAAATTGAATGACTTTTGAAACTTGTGATCTAAAACAATCCTTAGATATTTGTGTGGTTGTAAATCATTTCATTAAGTGTAAAAGGGGAGTTTTTTAGTTAAATTGTTTTTAATTATAAGAAGGTGACATTCTGGATGAACTTAAAAAGGAAAAGGTGTCACATAAAATGGGACGAAGGGAGTAATACTTTTGATTCTTTCTATTTCCTTTTTTCTTTTTTTTTCGTCTTTTTTCTTGCGTAATTCTTACTCTTCATTAAGAGGTCTTTGATCAACCTTCTATTGAAGACTAGTTGATTACCACAACAGTTCAATTTATTGAAAAAAATACCATCCCCCTGTATGAACTACTCTTTTACGGTTAGTATATCACCTTGTTAAAAAACAACTGTCTTTGGAATTTTGGATTGGATAATTTAGTAAACATAAAATTTGTTTGCAACCATTTACTTTGCAAGATTGACGACCAGACCTTCACAGTACTTATTCTATCATCTTAGTTGAAATACGGTAACAATTCCTAAATATCATGCTTTAGACTTAATAACAAGTCTATAGGTTTAGAAAGAAAAAAAAGTCAACGGTATTTTACTTTTCGAAAATAAATTTTGGACAGACAACTGTAGATGAAAAGGTTTAGATTTAAAGAGAAAGATGACTTATTAAAGGAATTTGAGAGTCTTAACTGATAATACTTGTAAGGTTGTCTGTTAATATGGAAATGAGTTTGGTTTTGTTCTTTTTCTGGGGAGATTTTTATTTTGTTTCAATAAAGAAATTGTGTTTTGTTTACCAAATAAACATGTGTTACACCTTTCTATTAAAAACTTTGTTGCTGCCTAAAATTATCAAGGTGGCAGTAATAACCAAGTTAAAAATTTCGGTGTTCTTAAAAATCATTCTTTGCATTTCTAGACCTAGTGAGTTTTCCTTTGTTGAATGAGCATTGAACAAAGACTAACAAGTTGATCTGTGAAATTTGAACTTAGAAGGTTCAGTTTGTAAATCACCCAAGGAGAAGTTGAAATATGAATAATTATTTTTACCTTTAAAAATTAAACATCTACAGTCTAAAATTAGAAATATGTTAATAAATCAGCTGTTCGAATAAGGACCCCAAGTAGGATATCAGCTGATCAAATTAGGACTCCAGGTAGGGTATTATCTTGTCTTATTTGTTTTCCTCTTTTCTGGTGTAGTGCTTCTTCTGCAGTGTATTCATCTTGGTTTTTTCTTATCATGTGATCCACTTTCGACTTGGCTTATGCTCTACATTGTTCTTATTTTTCACTAAGTTTTTGTGCTATCAATGTATTCTTCACTCCCATTTCCTGTGTTTTTTTATGCAAATAGGAGACTTGCACAGATGACATCTCATACTTGATTTGCTGTGTCTCTCAATCCTTATATTTTGCAGGTGATAGCAGCAAGGTTATTGGAATCTAAGCAATCTACCCCTCACTTGTATTTGTCCACAGGTTCTGTCAATTCTCAAGTTCTTAGTGCCTACTAAGCTTTTGTAACTATTATGCATCTACTTGATGCCTGCAATAGAACTAATTACTTCATCAAAAAAAAAAAATTCTTAGTGCTATGAGTAGTAATTACTAATATCTAATTTGTGGAACTTTTTCAAATTATTCATTTCTCACAGATGTTATATTGGACTCTCTTCTCTCCTTCAGAAAGGAGCTTAAAGGTATAGAATTAAGGTATTTAATTTGTATTGTTGCTTGTGCTGATATTCCTTCATAATGATCTGGCACATCTTTATTCTGTGCAGAAAAGTATGATGTTAAAGTCTCTGTGAATGACATTGTAATCAAAGTGGTTGCAGCAACATTAAGAAATGTACCAGGAGCAAATGGTGAGTTTTTATTAGTATTTTCATTGCTAATTGAAGTTCTAACTTATTTTTCATTAACAGCTAAAATGTAGGATGAAGCGAGGCATAGTTAGCTATGAAACCTAATTGTGAATTTGTTTAGTATGTGGAAGCAGACTTTCTAGCTTTGTTAGATGAATGACCATAATCTTTTTTCTCAATTTTGATACTTCCCAATCAGTTTCATTTAGTTCTTATGTCAGGAAAAGATCATATGATCTCTGAAAGAAGATGTAGGAGGGACAAAAGATAGCTTTTCCAGTTAAATGTGAATGGTGTTTGTTGTAACATGCACTTAGATATCATATAATCCTTTTTGTCAAAAAAAGAAAAGATATCATATAATCATTTACAACTGTATGTTTATTGTGTTCTGTTTTAGGTAAATATTAAGAGTTTATAATTGATATTACTGTGAACATAATAATGTCCATTGATGATAATTGACTTGTCATTTTTCCCGTTTCCCTTAAATGCTCATGGTTTGGGCATATTAAGGGCGATAAGATTAGGAACGAGGGTATACGGGACAAGGTGGTAGTGAGCTCCGTGGTGAACAAGATGACGGAATGGAGACTAAGATGGTTTAAGCATGTGAAGAGGAGATGTGCATATGTCCCAATGAGGAGGTATTAGAGGTTGGATATAGTGGGTACAAGGAGAGGTAGAGGTAGACCAAAAAAGTATTGGGGAGAGGTGATTACACATGAAATTGTAGCTTCAGCTTACAGAGAAATGCCCGTAGATAGGAGGTTGTGGAGGACATGTATTAGGATAGAAGGTTAGTAGGCATTGTTCGTCCATACTAGTAGTTGTAGATTACTTGTGTAGTTTTTTGTTCTTCAACTATCATATTATTTTGTTGTGGAACTGTTCTGTTACTATCTGCTGTTTTTGTCACTATGTATTGATTCTTGTACTTCCATTACTATCAGTTGTTTATTATTGAGCCGAGGGTCTACGAAAACAACTTCTCTACTAAGGTGGGGGTACGGTGGCATATGCTTTACCCTCGCCAGACCACATTTTGTGGAATTCCATTGGGTATGTTGTTGTTGTGTCTCAAATGCTCATGGTGTATCAAGTTTTTTCTTATTTGTAAGTTCAGAAGTGAACATTTAATTTGAGAAATGAGGCTATAAGTTATGTATTTCCATTTATATGAATGAAGCATGCTAGCTCTCTTATTTCCAGAGGTCTAGTGGGTCTCCTACAATCTCTTTTACTAAGAAGCATTCAGTGAGACACTCAACCCCATTAGGCTTCATCCTAATCATGTACAATCTCTGTTGGTCTGGAGTGAAGCCACTTAAGTCTTCACTATCTAATTATTCTTCACGGAAAAAATACTCAATTTGTAGAGGAGAAACTCTCGTCTCATTTTGCAAAACCTCTTTCCGGACGGAATAGGAGACTTGTCTGGTTATGTACTACAGTTGTTCTCCAGTAATTTCTTTTTTTTTTAAATGCATTTACAGATTAACAGACTCTATATGTGTATACTTCTTTCTCTTTTTTCCACAACTTAAAGAGTATCTATCTGTTGACTTTATGTTGTGCAATCACAAACTTTTAGTCCAACTGGCCAAAGAATTCTATATCCTCTTTGCTTCTGTATATATTGCAACTTATTGTGGAAAGAGTTGATTTTGTTTACAGTCTAACTCTAACTCTTCATTCAGACAAACTTTTAATGAAGACCACTATTTCCATGAAACCTATTGTACTTTTGGTTCTTCTCCTGGCATTCATAATAACTATTGATAGCAACTGTCGATTTGTTGGTGTTTGTCTAGGATACTGTAAAATTGTAAGGTGATCTTTTTCCTTATTTGTCTCCTGTAAATCATGATAAAATCTAGACCAGCAATCGAGAGTGTGTAATTTTTGCTGAACTGTTCTTCAGAAACCTGTAGCACTTCTCTGCTCACAATACCCTTAAAAGCTATAACCCCACCCTCACAAGCAAGAATAGCAGAAAAGGATGGAGAGTCATTGTACTTAATTGATGGCTATATCCTTCAAGTATGGTTTTCCGGTTACTAAATCAATTCATTCCTGATCTATGATTATTCCTCATTGAATTTCACTACATAGACTTTTAGTTTACTTGCGGATGACTAGCTTAGTGAAAGACACTTTCTCCTGTGAAATGCTAGTTCACTGAAAAGCTTTCTCTTTAAATCCATTACAGCTTACTGGGATGATGGAAAAGGTGAGGTGGTGCTTTGTGATTCTGTCGATATATCTGTTGCGGTTGCCACTGAAAAGGTATGCAGCATACTACTGTTTTGTTGGATTTTGTACAAATCTTGTTCTCATTCCATTTTCTTGAGTTTCAGGGCTTGATGACCCCAATTATCAGGAATGCTGATCAAAAATCCATATCCTCAATATCTGCGGAGGTAAAAAGGGATATAGGTTGCACTGTTTATTTTTTCAATATCTTGGATGATAAGGCTAGACACTATTTGCTTTTAAATGGGGATATTGAAATTCTGTTTAATGTATAAACTATAGGATTTTGATACTTTGAAGGGAACTGCAATTTTGTTCATAGAAGCTAGCACGAGAAATATTTTCTGCAATATGTATATACTGTATATTTTCTGTCTTTATATAGGAGTCTAATATCCCAGCTTATTGTGGTTTCTTACCTTCTCATTATCATCTACTTGTGCATGAAAGATCAAGGAGCTTGCTGGAAAGGCACGAGCTGGAAAGCTTAAACCTAATGAATTCCAAGGTGGCACTTTCAGGTGAATAATCGACTTCAGATTCTAGGCATTGTAAAGAGCAGCTCTATTGGGCAGGAATTATATCTTCTGTGTCTTTTTGCAGCATTTCAAACTTGGGCATGTTTCCAGTGGATCGGTTTTGTGCAATTATCAACCCTCCTCAGGTCAATATACTTTTCTTCCGTCTCATCCAGTAGCACCCCTGCATGAAAAATATCTGCTATTCCTTCCCTTTGATCGAATAGATTAGCGTTTTATGTCAGCCTCTCCTTAACTATTGAACTTCTACAGTCCATGCATTAAATTTTATAACTGAATTGTTACCGGTGAGTTATATAACTGATAGTTCTCCAGAACAGGTCATCCCTGTCACTGCTCATACACCTCTTGCTTGAAATCCATAACATTGTAATCTCTTTCCTCAGGCCGGTATAATTGCTGTTGGTAGGGGCAATAAAGTTGTCGAACCTGTGGTTGGTGCTGACGGTATAGTTCTAACTGAAAATTCTCATTGTGTAATTTTTTTGCTTATTCAATTTGCTGAAATATTGCCAACACCACACCGATTAGTTTAGGATTGAGATGTATAGTAGTTTCTTTAACTAGTTGAATTTCGCTTCCTTCTTTTCAGGAATTGAGAAACCAGCTGTTGTTAACAAGATGAGTTTGACATTATCAGCTGATCATCGCGTCTTTGATGGGAAGGTTGGAGGTAAAGTTCAGACTTCTCATCTTTAAAAACTTGTATAGTTTACCGAAGTAGAGATTGTAGTTCACGTGTTTACATCTCTTCAATCAATCTTGCAGGTGCGTTCGTTTCAGCATTGTCATCTAACTTCAGTGACATCAAGAAGCTTCTACTTTAATACGGATGAAGTGTCTGGGAACAAAATATCCTACAGGACATGTCACCTGTGCAGGCGGCGTAGTTGTTTTTTCTGATGATAGTTTGCCTCTTTCAGATCTCAAGCTTGTATTAATGGTGCCATTTTTGTTCTTGAAGATAGAAATGATTTGAGGTCCATAAAATTGGACTAGTTCCAATACCAATGATACTACCATTTCTTCTGAGATGCCAAGTTTATGACACTTCACAGTTCCATCTGTTCTCCCTGTAAAGTTGTACAATAGGGGTGCCTCAATATTTTTTACCAAATAAAAAGCTGATTTTTTCCTCTCTTGCTCAT---ATAATGTTTTTCCTTTACTTTTACAGACCATGTAACAGCTAAACCAAATTTCTTTTGTTTAATCACCAAAAGAAAATTATTGCTCAATACATATTAACTGATAAATATAAAACTCAATGATGAGAATTGACAAGGA</genome_strand>
        <mrna_strand>GATAGCGGAATAATAATAAGCATATAGAAGTTGAAGAAAGCAAGAGCGTGGTGGATCTGTGAATGATCGATGGCGCTCTCTCGACTTCGTCATCCGTTGATTTTCCGAGCTCCGTCGCTACTCCGAGCTCGCCGTCTTCTCGCCGCCGGTCCTTGTAACTCCTCCACACTCCGATCGCTCCATCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCCTGGGGTGCTGAATCAAATTCCTGATGTGGATGCTTCTTCATTAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTTAAATTTCCGCCTGCTCAGTGAAGTACATGTCGTACCATCTAAG............................................................................CTACAAAGTGGTGTTCGGCACTTCTCGTCAGCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCTCCTTCATATACAGAGGTGGGAATGCCAGCTTTGTCCCCTACAATG....................................................................................................ACTCAAGGTAATATAGCAAAATGGATAAAGAAAGAGGGGGACAAG........................................................................................................................................ATTCAAGCAGGGGATGTACTATGTTTGATAGAGACTGATAAAGCAACGCTTGAGTTTGAAACTCTTGAAGAAGG.................................................................................................................................................................................................................................................TTTCCTTGCAAAGATATTGGTCCCTGAAGGAACAAAAGATGTACCGGTGGGACAGACTATAGCAATTACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAAGAAGCAGATGACATACAAAAAGTCCCTGCTACCGTTGGTGGTGCATCAGAGGTTAAAAATCAAGCATCTTCTCAGACAGATGCAGCAAGGGGAGATGGGGCTACAGAAGTGAGTCCTGCGAATATCAGCTCATCTGAACTTCCTCCACATCTGATCCTTGATATGCCAGCTTTGTCCCCAACCATG...................................................................................................AACCAAGGTAACATTTTTAAATGGAGGAAAAAGGAAGGTGACAAG................................................................................................................ATAGAGGTTGGTGATGTTCTCTGTGAGATAGAAACTGACAAAGCAACTCTTGAGCATGAAAGTCTTGAAGAAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTGGCCAAAATACTGGCACCTGAAGGTTCAAAAGATGTGGCTGTTGGGCAGCCTATTGCAATCATG...........................................................................................................................................................................................................................GTTGAGGATGAAAATGATATTGAAGCTGTGAGGACATCGATCAGCGGCAACAATGTGGTTAAGGAAGAAAAGCCGGTCAGTCATGATGTCACAACTGAAGTTAGAACTCAGACAACAGGTTTCAATAGAATCAGTCCAGCTGCTAAGGTATTAATTATGGAACATGGTTTAGATGCATCATCAATTCCAGCATCTGGTCCTCGTGGTACCTTGTTAAAGGGAGATGTTCTTGCTGCATTGAAGTCTGGAAAGGGATCAAGCAACAATTCATCAGTTGGGAAGGCAACTCCATCTCCTCCTCAGGTCAACCAACAAGCTACTCCAACAAAGTCACTTGATTTAAAATCTGATGGACAGCAAAAGGATGCTTATGAAGATTTACCCAATAGTCAAATTCGCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATAGCAGCAAGGTTATTGGAATCTAAGCAATCTACCCCTCACTTGTATTTGTCCACAG................................................................................................................................................................................ATGTTATATTGGACTCTCTTCTCTCCTTCAGAAAGGAGCTTAAAG....................................................................................AAAAGTATGATGTTAAAGTCTCTGTGAATGACATTGTAATCAAAGTGGTTGCAGCAACATTAAGAAATGTACCAGGAGCAAATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTACTGGGATGATGGAAAAGGTGAGGTGGTGCTTTGTGATTCTGTCGATATATCTGTTGCGGTTGCCACTGAAAAG.......................................................................GGCTTGATGACCCCAATTATCAGGAATGCTGATCAAAAATCCATATCCTCAATATCTGCGGAG...........................................................................................................................................................................................................................................................................................ATCAAGGAGCTTGCTGGAAAGGCACGAGCTGGAAAGCTTAAACCTAATGAATTCCAAGGTGGCACTTTCAG..................................................................................CATTTCAAACTTGGGCATGTTTCCAGTGGATCGGTTTTGTGCAATTATCAACCCTCCTCAG.....................................................................................................................................................................................................................................................................GCCGGTATAATTGCTGTTGGTAGGGGCAATAAAGTTGTCGAACCTGTGGTTGGTGCTGACG.................................................................................................................................................GAATTGAGAAACCAGCTGTTGTTAACAAGATGAGTTTGACATTATCAGCTGATCATCGCGTCTTTGATGGGAAGGTTGGAG...............................................................................................GTGCGTTCGTTTCAGCATTGTCATCTAACTTCAGTGACATCAAGAAGCTTCTACTTTAATACGGATGAAGTGTCTGGGAACAAAATATCCTACAGGACATGTCACCTGTGCAGGCGGCGTAGTTGTTTTTTCTGATGATAGTTTGCCTCTTTCAGATCTCAAGCTTGTATTAATGGTGCCATTTTTGTTCTTGAAGATAGAAATGATTTGAGGTCCATAAAATTGGACTAGTTCCAATACCAATGATACTACCATTTCTTCTGAGATGCCAAGTTTATGACACTTCACAGTTCCATCTGTTCTCCCTGTAAAGTTGTACAATAGGGGTGCCTCAATATTTTTTACCAAATAAAAAGCTGATTTTTTCCTCTCTTGCTCATAAAAAAAAATTTTTCCTTTACTTTTACAGACCATGTAACAGCTAAACCAAATTTCTTTTGTTTAATCACCAAAAGAAAATTATTGCTCAATACATATTAACTGATAAATATAAAACTCAATGATGAGAATTGACAAGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U316395" ref_strand="+" ref_description="SGN-U316395        Tomato 200607 #1 [6 ESTs aligned] arabidopsis/peptide: | Symbol: None | dihydrolipoamide S-acetyltransferase, putative, similar to dihydrolipoamide acetyltransferase (E2) subunit of PDC (Arabidopsis thaliana) GI:559395; contains Pfam profiles PF00198: 2-oxo acid dehydrogenases acyltransferase (catalytic domain), PF00364: Biotin-requiring enzyme, PF02817: e3 binding domain; supporting cDNA gi:5881964:gb:AF066080.1:AF066080 | chr3:19371184-19377365 FORWARD | Aliases: T25B15.141(evalue: 7e-54, score=206) genbank/nr: gi|5881965|gb|AAD55140.1| dihydrolipoamide S-acetyltransferase [Arabidopsis thaliana](evalue: 4e-52, score=207)">
      <seq>caactcttgagcatgaaagtcttgaagaaggattcttggccaaaatactggcacctgaaggttcaaaagatgtggctgttgggcagcctattgcaatcatggttgaggatgaaaatgatattgaagctgtgaggacatcgatcagcggcaacaatgtggttaaggaagaaaagccggtcagtcatgatgtcacaactgaagttagaactcagacaacaggtttcaatagaatcagtccagctgctaagtctggaaagggatcaagcaacaattcatcagttgggaaggcaactccatctcctcctcaggtcaaccaacaagctactccaacaaagtcacttgatttaaaatctgatggacagcaaaaggatgcttatgaagatttacccaatagtcaaattcgcaaggtgatagcagcaaggttattggaatctaagcaatctacccctcacttgtatttgtccacagatgttatattggactctcttctctccttcagaaaggagcttaaagaaaagtatgatgttaaagtctctgtgaatgacattgtaatcaaagtggttgcagcaacattaagaaatgtaccaggagcaaatgcttactgggatgatggaaaaggtgaggtggtgctttgtgattctgtcgatatatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0143O06.1" temp_strand="-" temp_description="C11HBa0143O06.1  AC220058.1 htgs_phase:3 submitted_to_sgn_as:gi|170933588|gb|AC220058.1| sequenced_by:ivf-caas upload_account_name:china11 Solanum lycopersicum chromosome 11 clone C11HBa0143O06, complete sequence">
        <position start="97000" stop="90860"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96700" g_stop="96670" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96669" i_stop="96232" i_length="438">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96231" g_stop="96162" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="101" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="96161" i_stop="95943" i_length="219">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95942" g_stop="95796" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="248" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95795" i_stop="95700" i_length="96">
            <donor d_prob="0.646" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95699" g_stop="95541" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="407" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="95540" i_stop="93879" i_length="1662">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="93878" g_stop="93818" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="408" r_stop="468" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="93817" i_stop="93642" i_length="176">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="93641" g_stop="93597" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="469" r_stop="513" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="93596" i_stop="93513" i_length="84">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="93512" g_stop="93429" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="514" r_stop="597" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="93428" i_stop="91217" i_length="2212">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="91216" g_stop="91160" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="598" r_stop="654" r_length="57" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0143O06.1" gen_strand="-" ref_id="SGN-U316395" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>654</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0143O06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U316395" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96700" e_stop="96670"/>
          <exon e_start="96231" e_stop="96162"/>
          <exon e_start="95942" e_stop="95796"/>
          <exon e_start="95699" e_stop="95541"/>
          <exon e_start="93878" e_stop="93818"/>
          <exon e_start="93641" e_stop="93597"/>
          <exon e_start="93512" e_stop="93429"/>
          <exon e_start="91216" e_stop="91160"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACTCTTGAGCATGAAAGTCTTGAAGAAGGGTAAACTTTCCCATTACATTTTAAATAAGATGTTTAATTGCAAGAAAATAAGATACTGTTAGAGATTATAACTATTACTATTTTTTACTGTACTTTCTATAAGGTAATTATTTCTTAGGACTTTCTAGTTATCCAGAAAAGCAGCCTCAAAATATTGAAGGAAGAATCCTTCCTAGCCTCTTCATATTGACTTTCTATGGCGGAGGCCTTCTTAGTTACATCTACTGCTGTTTATTTCTGGGAGTATGTGAGGTTGTTTTTGTTACGGTTTTATCATGTTTTGAGTCTTTGAAGTAGAAGACATTCCATTCCATGTGTATCCTGTTTGCTCTTGTAGATTATGAAACTATTTCCCTCTAATTCAGTGTTGGTTTTACAATTTGATGTGTTTGTTTTCTTTGGCCACAAAAAAATATTTTTATCTGGTGTGATTTCTAGATTCTTGGCCAAAATACTGGCACCTGAAGGTTCAAAAGATGTGGCTGTTGGGCAGCCTATTGCAATCATGGTAAGTTGCTGATGCTCCTCTCTTTTTTTCACCTTCTGTGAGAAATTTAGAACTTTCTGTTGTCTTAACCATTAGAAGATGCAAATCAGTATATTCAGATTTAGGGTAGGGACTTGTTGTAGTTCTTTTTTTTTTTTAAAATATTTTATCTGGTATAGTTACTCTGCTATGGATTATAACTCTTAGCATTTTGTGGAATAAATACTTCTTTTTTGCAAGGTTGAGGATGAAAATGATATTGAAGCTGTGAGGACATCGATCAGCGGCAACAATGTGGTTAAGGAAGAAAAGCCGGTCAGTCATGATGTCACAACTGAAGTTAGAACTCAGACAACAGGTTTCAATAGAATCAGTCCAGCTGCTAAGGTATTAATTATGGAACATGGTTTAGATGCATCATCAATTCCAGCATCTGGTCCTCGTGGTACCTTGTTAAAGGGAGATGTTCTTGCTGCATTGAAGTCTGGAAAGGGATCAAGCAACAATTCATCAGTTGGGAAGGCAACTCCATCTCCTCCTCAGGTCAACCAACAAGCTACTCCAACAAAGTCACTTGATTTAAAATCTGATGGACAGCAAAAGGATGCTTATGAAGATTTACCCAATAGTCAAATTCGCAAGGTACTATGAACTACCATCAGCAGTTATTTAACACTTTTACCTTATTATACTTATTAAATGATAGAGCCTTAATTGTGTTGTTTAGGTATTTTATGTTATATACTATCATATTTGCTAACACATTGAGAAAAAAATGAAGGACAATCTTATTTCTTGGATGTAATGATCAGTTTCATTTATCTATGTAATACGAGTCTCTTTCTTAAATTTTTAAATGTGGGTGAGAACATAACTTGGTTTAAGAAAAAATTGAATGACTTTTGAAACTTGTGATCTAAAACAATCCTTAGATATTTGTGTGGTTGTAAATCATTTCATTAAGTGTAAAAGGGGAGTTTTTTAGTTAAATTGTTTTTAATTATAAGAAGGTGACATTCTGGATGAACTTAAAAAGGAAAAGGTGTCACATAAAATGGGACGAAGGGAGTAATACTTTTGATTCTTTCTATTTCCTTTTTTCTTTTTTTTTCGTCTTTTTTCTTGCGTAATTCTTACTCTTCATTAAGAGGTCTTTGATCAACCTTCTATTGAAGACTAGTTGATTACCACAACAGTTCAATTTATTGAAAAAAATACCATCCCCCTGTATGAACTACTCTTTTACGGTTAGTATATCACCTTGTTAAAAAACAACTGTCTTTGGAATTTTGGATTGGATAATTTAGTAAACATAAAATTTGTTTGCAACCATTTACTTTGCAAGATTGACGACCAGACCTTCACAGTACTTATTCTATCATCTTAGTTGAAATACGGTAACAATTCCTAAATATCATGCTTTAGACTTAATAACAAGTCTATAGGTTTAGAAAGAAAAAAAAGTCAACGGTATTTTACTTTTCGAAAATAAATTTTGGACAGACAACTGTAGATGAAAAGGTTTAGATTTAAAGAGAAAGATGACTTATTAAAGGAATTTGAGAGTCTTAACTGATAATACTTGTAAGGTTGTCTGTTAATATGGAAATGAGTTTGGTTTTGTTCTTTTTCTGGGGAGATTTTTATTTTGTTTCAATAAAGAAATTGTGTTTTGTTTACCAAATAAACATGTGTTACACCTTTCTATTAAAAACTTTGTTGCTGCCTAAAATTATCAAGGTGGCAGTAATAACCAAGTTAAAAATTTCGGTGTTCTTAAAAATCATTCTTTGCATTTCTAGACCTAGTGAGTTTTCCTTTGTTGAATGAGCATTGAACAAAGACTAACAAGTTGATCTGTGAAATTTGAACTTAGAAGGTTCAGTTTGTAAATCACCCAAGGAGAAGTTGAAATATGAATAATTATTTTTACCTTTAAAAATTAAACATCTACAGTCTAAAATTAGAAATATGTTAATAAATCAGCTGTTCGAATAAGGACCCCAAGTAGGATATCAGCTGATCAAATTAGGACTCCAGGTAGGGTATTATCTTGTCTTATTTGTTTTCCTCTTTTCTGGTGTAGTGCTTCTTCTGCAGTGTATTCATCTTGGTTTTTTCTTATCATGTGATCCACTTTCGACTTGGCTTATGCTCTACATTGTTCTTATTTTTCACTAAGTTTTTGTGCTATCAATGTATTCTTCACTCCCATTTCCTGTGTTTTTTTATGCAAATAGGAGACTTGCACAGATGACATCTCATACTTGATTTGCTGTGTCTCTCAATCCTTATATTTTGCAGGTGATAGCAGCAAGGTTATTGGAATCTAAGCAATCTACCCCTCACTTGTATTTGTCCACAGGTTCTGTCAATTCTCAAGTTCTTAGTGCCTACTAAGCTTTTGTAACTATTATGCATCTACTTGATGCCTGCAATAGAACTAATTACTTCATCAAAAAAAAAAAATTCTTAGTGCTATGAGTAGTAATTACTAATATCTAATTTGTGGAACTTTTTCAAATTATTCATTTCTCACAGATGTTATATTGGACTCTCTTCTCTCCTTCAGAAAGGAGCTTAAAGGTATAGAATTAAGGTATTTAATTTGTATTGTTGCTTGTGCTGATATTCCTTCATAATGATCTGGCACATCTTTATTCTGTGCAGAAAAGTATGATGTTAAAGTCTCTGTGAATGACATTGTAATCAAAGTGGTTGCAGCAACATTAAGAAATGTACCAGGAGCAAATGGTGAGTTTTTATTAGTATTTTCATTGCTAATTGAAGTTCTAACTTATTTTTCATTAACAGCTAAAATGTAGGATGAAGCGAGGCATAGTTAGCTATGAAACCTAATTGTGAATTTGTTTAGTATGTGGAAGCAGACTTTCTAGCTTTGTTAGATGAATGACCATAATCTTTTTTCTCAATTTTGATACTTCCCAATCAGTTTCATTTAGTTCTTATGTCAGGAAAAGATCATATGATCTCTGAAAGAAGATGTAGGAGGGACAAAAGATAGCTTTTCCAGTTAAATGTGAATGGTGTTTGTTGTAACATGCACTTAGATATCATATAATCCTTTTTGTCAAAAAAAGAAAAGATATCATATAATCATTTACAACTGTATGTTTATTGTGTTCTGTTTTAGGTAAATATTAAGAGTTTATAATTGATATTACTGTGAACATAATAATGTCCATTGATGATAATTGACTTGTCATTTTTCCCGTTTCCCTTAAATGCTCATGGTTTGGGCATATTAAGGGCGATAAGATTAGGAACGAGGGTATACGGGACAAGGTGGTAGTGAGCTCCGTGGTGAACAAGATGACGGAATGGAGACTAAGATGGTTTAAGCATGTGAAGAGGAGATGTGCATATGTCCCAATGAGGAGGTATTAGAGGTTGGATATAGTGGGTACAAGGAGAGGTAGAGGTAGACCAAAAAAGTATTGGGGAGAGGTGATTACACATGAAATTGTAGCTTCAGCTTACAGAGAAATGCCCGTAGATAGGAGGTTGTGGAGGACATGTATTAGGATAGAAGGTTAGTAGGCATTGTTCGTCCATACTAGTAGTTGTAGATTACTTGTGTAGTTTTTTGTTCTTCAACTATCATATTATTTTGTTGTGGAACTGTTCTGTTACTATCTGCTGTTTTTGTCACTATGTATTGATTCTTGTACTTCCATTACTATCAGTTGTTTATTATTGAGCCGAGGGTCTACGAAAACAACTTCTCTACTAAGGTGGGGGTACGGTGGCATATGCTTTACCCTCGCCAGACCACATTTTGTGGAATTCCATTGGGTATGTTGTTGTTGTGTCTCAAATGCTCATGGTGTATCAAGTTTTTTCTTATTTGTAAGTTCAGAAGTGAACATTTAATTTGAGAAATGAGGCTATAAGTTATGTATTTCCATTTATATGAATGAAGCATGCTAGCTCTCTTATTTCCAGAGGTCTAGTGGGTCTCCTACAATCTCTTTTACTAAGAAGCATTCAGTGAGACACTCAACCCCATTAGGCTTCATCCTAATCATGTACAATCTCTGTTGGTCTGGAGTGAAGCCACTTAAGTCTTCACTATCTAATTATTCTTCACGGAAAAAATACTCAATTTGTAGAGGAGAAACTCTCGTCTCATTTTGCAAAACCTCTTTCCGGACGGAATAGGAGACTTGTCTGGTTATGTACTACAGTTGTTCTCCAGTAATTTCTTTTTTTTTTAAATGCATTTACAGATTAACAGACTCTATATGTGTATACTTCTTTCTCTTTTTTCCACAACTTAAAGAGTATCTATCTGTTGACTTTATGTTGTGCAATCACAAACTTTTAGTCCAACTGGCCAAAGAATTCTATATCCTCTTTGCTTCTGTATATATTGCAACTTATTGTGGAAAGAGTTGATTTTGTTTACAGTCTAACTCTAACTCTTCATTCAGACAAACTTTTAATGAAGACCACTATTTCCATGAAACCTATTGTACTTTTGGTTCTTCTCCTGGCATTCATAATAACTATTGATAGCAACTGTCGATTTGTTGGTGTTTGTCTAGGATACTGTAAAATTGTAAGGTGATCTTTTTCCTTATTTGTCTCCTGTAAATCATGATAAAATCTAGACCAGCAATCGAGAGTGTGTAATTTTTGCTGAACTGTTCTTCAGAAACCTGTAGCACTTCTCTGCTCACAATACCCTTAAAAGCTATAACCCCACCCTCACAAGCAAGAATAGCAGAAAAGGATGGAGAGTCATTGTACTTAATTGATGGCTATATCCTTCAAGTATGGTTTTCCGGTTACTAAATCAATTCATTCCTGATCTATGATTATTCCTCATTGAATTTCACTACATAGACTTTTAGTTTACTTGCGGATGACTAGCTTAGTGAAAGACACTTTCTCCTGTGAAATGCTAGTTCACTGAAAAGCTTTCTCTTTAAATCCATTACAGCTTACTGGGATGATGGAAAAGGTGAGGTGGTGCTTTGTGATTCTGTCGATATATCTG</genome_strand>
        <mrna_strand>CAACTCTTGAGCATGAAAGTCTTGAAGAAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTGGCCAAAATACTGGCACCTGAAGGTTCAAAAGATGTGGCTGTTGGGCAGCCTATTGCAATCATG...........................................................................................................................................................................................................................GTTGAGGATGAAAATGATATTGAAGCTGTGAGGACATCGATCAGCGGCAACAATGTGGTTAAGGAAGAAAAGCCGGTCAGTCATGATGTCACAACTGAAGTTAGAACTCAGACAACAGGTTTCAATAGAATCAGTCCAGCTGCTAAG................................................................................................TCTGGAAAGGGATCAAGCAACAATTCATCAGTTGGGAAGGCAACTCCATCTCCTCCTCAGGTCAACCAACAAGCTACTCCAACAAAGTCACTTGATTTAAAATCTGATGGACAGCAAAAGGATGCTTATGAAGATTTACCCAATAGTCAAATTCGCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATAGCAGCAAGGTTATTGGAATCTAAGCAATCTACCCCTCACTTGTATTTGTCCACAG................................................................................................................................................................................ATGTTATATTGGACTCTCTTCTCTCCTTCAGAAAGGAGCTTAAAG....................................................................................AAAAGTATGATGTTAAAGTCTCTGTGAATGACATTGTAATCAAAGTGGTTGCAGCAACATTAAGAAATGTACCAGGAGCAAATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTACTGGGATGATGGAAAAGGTGAGGTGGTGCTTTGTGATTCTGTCGATATATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335647" ref_strand="+" ref_description="SGN-U335647        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | dihydrolipoamide S-acetyltransferase, putative, similar to dihydrolipoamide acetyltransferase (E2) subunit of PDC (Arabidopsis thaliana) GI:559395; contains Pfam profiles PF00198: 2-oxo acid dehydrogenases acyltransferase (catalytic domain), PF00364: Biotin-requiring enzyme, PF02817: e3 binding domain; supporting cDNA gi:5881964:gb:AF066080.1:AF066080 | chr3:19371184-19377365 FORWARD | Aliases: T25B15.141(evalue: 2e-33, score=133) genbank/nr: gi|15231159|ref|NP_190788.1| dihydrolipoamide S-acetyltransferase (LTA3); nuclear gene encoding mitochondrial protein [Arabidopsis thaliana] gi|11257430|pir||T49099 dihydrolipoamide S-acetyltransferase precursor - Arabidopsis thaliana gi|4678949|emb|CAB41340.1| dihydrolipoamide S-acetyltransferase precursor [Arabidopsis thaliana](evalue: 1e-31, score=133)">
      <seq>tcgatggcgctctctcgacttcgtcatccgttgattttccgagctccgtcgctactccgagctcgccgtcttctcgccgccgggccttgtaactcctccacactccgatcgctccatcatgttcctggggtgctgaatcaaattcctgatgtggatgcttcttcattaaggcttttaaatttccgcctgctcaatgaagtacatgtcgtaccatctaataggctccttcatatacagaggtgggaatgccagctttgtcccctactatgactcaaggtaatatagcaaaatggataaagaaagagggggacaagatttcctaacagattcaagcaggggatggactatgtttgatatagactgataaagcaacgcttgagtttgaaactcttgaagaatgtttccttgcaaagatattggtccctgaaagaacaaaagatgtaccggtgggacagactatagcaattacggtggaagaagcagatgacataccataagtccctgctaccgttggtggtgcatcaaaggttaaaaatcaagcatcttctcacacagatgcaccaacgggagatggggctacagaattgagtcctgcgaatatcagctcatctgaacttcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0143O06.1" temp_strand="-" temp_description="C11HBa0143O06.1  AC220058.1 htgs_phase:3 submitted_to_sgn_as:gi|170933588|gb|AC220058.1| sequenced_by:ivf-caas upload_account_name:china11 Solanum lycopersicum chromosome 11 clone C11HBa0143O06, complete sequence">
        <position start="106922" stop="96743"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106622" g_stop="106504" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="119" r_length="119" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="106503" i_stop="104831" i_length="1673">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104830" g_stop="104780" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="170" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104779" i_stop="103537" i_length="1243">
            <donor d_prob="0.664" d_score="1.00"/>
            <acceptor a_prob="0.719" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103536" g_stop="103488" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="219" r_length="49" r_score="0.959"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="103487" i_stop="100997" i_length="2491">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="100996" g_stop="100947" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="269" r_length="50" r_score="0.980"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="100946" i_stop="100847" i_length="100">
            <donor d_prob="0.975" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="100846" g_stop="100802" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="314" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="100801" i_stop="100678" i_length="124">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="100677" g_stop="100592" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="315" r_stop="400" r_length="86" r_score="0.965"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="100591" i_stop="100351" i_length="241">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="100350" g_stop="100281" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="470" r_length="70" r_score="0.986"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="100280" i_stop="97192" i_length="3089">
            <donor d_prob="0.993" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="97191" g_stop="97043" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="471" r_stop="619" r_length="149" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0143O06.1" gen_strand="-" ref_id="SGN-U335647" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>619</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0143O06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335647" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106622" e_stop="106504"/>
          <exon e_start="104830" e_stop="104780"/>
          <exon e_start="103536" e_stop="103488"/>
          <exon e_start="100996" e_stop="100947"/>
          <exon e_start="100846" e_stop="100802"/>
          <exon e_start="100677" e_stop="100592"/>
          <exon e_start="100350" e_stop="100281"/>
          <exon e_start="97191" e_stop="97043"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGATGGCGCTCTCTCGACTTCGTCATCCGTTGATTTTCCGAGCTCCGTCGCTACTCCGAGCTCGCCGTCTTCTCGCCGCCGGTCCTTGTAACTCCTCCACACTCCGATCGCTCCATCAGTACGCTTTCCTCTTCACATTTTTATTGTCATTTTCTGAATCGTTGTAATTTGATAGCTCAAAAGCCTGTAATCGATTATACTTGTTGTAATATGGATTATAAATTGCTTAATGTTCGCGTTGATTTTAGATATAAGCTCAAAAAACAAGGAGAAATTAGAAATGATTATATATATGTGTGTGTGTTGGCTGCGCGTTCGGATTATGTAGCTATAGGCATTTGAGATTGAATGATATTTGGTTAATTAGGCTAGAAGAAGCAAATAAGTGTGTGGTGTAATGCATTATTCAGTTTTGCTCCATTTTAATGAACTGTTTGGACTTTGGAACCTTGAATATTAGTTTGATTTATGGTGTAAGTTACTTGGTTTGCTGTTGAGTAATTTGAAGATTTTCTTCTAGTTAGAGGAGTTATTTTTTAAGATCACATGTAGCAGTTTGAGGGAGTTCTTCATCTAGTAATCTTTCTTCCAAAGGTTCCTATCGTCATGTTTAGGATGTGGATTGGGGGTTCATCATGGTGGAAAATTTCAGTCGTGAAAGAAGAAGATTGTGATGTTTTTAGGTAATATTCATTCAAACTAAGGGTATACAGTGCATTTCCAAAGGCATGCTAATATGTCAATTTTAAGAAAATCAAGGCATGCTAATATTTCTGATTATGAATAAAAGTAGGCTTAGATGGAAAAGAGGATTGCAGGATTGGTTATACTTTGTGAGAAATGAAATGGAACTGGGTGCCTCATTGGTTGCAGTATTTCTTGTAAATTGAAAGCTTGTACTTTTTATAGAAAAAAGATATCAAAGATGAAGTAATAAAAGGAGTAACAAGAAAAGCAAGCTCAAAAAAAACAAGAATGGAAGGCGTTGGAGTGCTCTAAACTTTGAACTTGTGGATAAATTTGGTGGGCAAGACAACTATATTTAGTGACAAAGAAGGAAAGATCTTCCTGTTGATTCTTTGTTTCTTTCCTCATAAGCCTTTTGTGCATGTATATTAAGTGCTTTTTTAGTCCATATTTGTTCAGTGATAAACAAAAGGAGAATCATTTTTTTTTATGTTGGGTTGAATAACGCAGCATTGAGATTGCACCCCTTCAATATAGTTTAAATAATTTCATTATTTAATAAAGAAAGTGGGGTGATGCACCAATGTTTTTAGTCAAGTACTTCTATTGATGTATGCCAGCAAAATACTGGAGTAATTGCTGTCTTATTATCAGTCATTTTGCATACGAAATTTGGACAAGAGACCTCTACTTTCACTGAATTCCCCAAGTTCCAATGATTGTAATGTTTGTTCGGACTTTTTAAGAAGATGCATTCTTTCTTGAGCACTTTGGCAGAATTTAATGTGTATTTTGATGTTTATTATTTCCATGCACCTAAGAGTGTGGACTAGTGGTTAATAAAAATGAGGTAAATAGTGGAGATCAAGGAAAAAAGCATGTAGGTGATTTCTTCGCATCTGCCTAAGCCTTGGTGGGCAAAGTTACCCGATAGTTGGTTCTATACAAGCTGGCGGTAGCAGGTACCTAGTAGAATAGTCAAAATACGAATAGCCTTGCCCGAAAACCACCATCATAAAAATGATGCTCATTTTTCCCTTGTTAATATTTATGAAATACATTTATTAGATTTGCAAATTTTCATTAATCATTTATTGGCTGCAGTGTTCCTGGGGTGCTGAATCAAATTCCTGATGTGGATGCTTCTTCATTAAGGTCTGATGTTAGTCCATTCTAGTGGTTTACGGAATTGTGCCATCTCAACTTAAAAGGTGTAACTGACATTTTTTTTAATAAGGTGTAACTGACATAATTTCTTCTCAAAGAAAAGTTCACTAACACAATTTTTCCTTTCCCAGAGAACTTTTGTTTAGTATTAAGATGAATGTCTTTTCTTGTCCTATAGAAACTCCAACCCAACTCAATAGTTTTCCAGATTTCATGTGGTTGAGTAGGGCAGTTGTGCAATGATGGATACGTTTCCTCAGAAGGGCCTAGCATAATGACTAATGTTTCTGCCTCCCTATCATGTCTGTGGTGGCATGAGTCCCACATTGATGTTTTTCTTTTGCATAATTTATAGATGCTGGATATGAGATGATACTCCCTCTATCTCAAAGAGAAACTTTATCTATACACTCCTTGATATGGTTTAAGATCTTGTTGAGAAAAAGAAGGTTATTTAGGGACATATATTCCTTAAAGTTCAAATGTAAGGACGTCGAGATGATGCAAAGTTACAAGAAGATGGAAAAGGAATGAACAATAACAAAAGCTTCACCTGAAGAGTCCTAAGATCTGACTACATTAACTTCTTTTATATGTGTGATGAAGAAACTGATTTATCTAGTAAACCTGACTATCACTCTGTTGTCAATCATGTCCAGAAAGATCCTTCTTCCAAATGATGGCTCATGGCCATAAGTCTTCAGCATTCACATGTATGATTGCAGACAATTTGAGTCTCTGTCTCTCTCTCCACGACTACCAACCTATTGCTATCTGACTGGGATATAAGCTATGAATAAGATGATGGCGTATCTTCAGAAATTTATGGCTGAAATGGATGTGATAAAATTTTAGGGACTCCTCAATTAAATTGTTCTATTTTACTATGGCCACTAACTGGATTTCTCATGTCATATGCTCAGTGAATAAAATTTTTGAGAGATTGATATTTTGATCTGATAACCATCTAAATTTTGACTTTTAGCTGTAGTTTTTAGCTTGGAGTGCCAATACTAATAGTAGCATAGTTGCTTAGTTAGTCTTTGTCTTTGCATATTACAATCTTACTGATTATCATATGGCTTCTTTAGACATTAAGTTGCATCAGTGTCATATTTTCATTGAACTAAATGCAATTATTAATTATTAATCAGCTGAAGGTAGTTTAATCTGCTCCATAATTGTTTTTTCTCAAAACATATTCTGTTCAATGACTTTGAAGTTTGGTCAGGCTTTTAAATTTCCGCCTGCTCAGTGAAGTACATGTCGTACCATCTAAGGTTAGTTGCAACACATGTCTTTCCATTAAATTTCATTACTTTATGTTTCCTTGATTCAATGGTGGAAATGTTGCAGCTACAAAGTGGTGTTCGGCACTTCTCGTCAGCTGGTAAGCACACTATACAAATGATGTTGCTCCCACCCAATGCTGTTATCTTTCCAGATATTTATAGATTGCTTTCAGTAACTTCCACCATCATATCTTGAATTTCAAGTGCAACACGGAATGAAAAATTAGTAAGGGGCCCATCTGATAAGAGCATATAAAAAGAAAAGTGGAATACAACTTAAGAAACTCTTTCAACTTCTAACATCTAAGAGAAATTGCATGAAACACGTGATAAGTCCTTTCCCGTTGGTCATGTTAGTAACATTATTTGTAGGAGATCGTTGCTTTGATCATGTTCTTATATCTAACTTGAACTCCTCATTTATACTGTTTTACTATAACAAGTAGCCCCTTCATATGTCATCATTTCATTGCATAATAGGGATGTGTTTCTTGGAGCTCCCATGTTTTTTTAAAATAATAAATAAATCGAAATATAAAGAGATGGAGCCAGTGCAAACTAAGCTAAAGATAGCGCACAATGGAAAGAATGATTCATATAGGTGATATCTACTAGTTGGACATAGGTTTTAGCGTGTTAGAGAACTTCTAAAACTATTACTCCCTCCACCTCATTATGTGGCACCCTTTGACTTGGCATAATGTTTAAGAAAAAAAGGAAGACTTTTGAAACTTATGGTCTAAAACATTCCTTGGATATTTGTGTGGTTGAGATTCATTTCATTAAGGGTAAAAAGGAAATTTCAAAATTAAATTGTTTGTAATTATAGTAAGTAGACATTCTCTTTGGGACGGATTAAAAATGACAGGGTTCCATATAAAATTTGATAGAGGGAGTATTATAATTACTATCTCCGTATCAAAATAAGTGCACTTCCCTTTTTAGTTTGTACAAAAGAATGCCTCTATCTATTTTCGGTAACTCCTTGAACCCCATATTTTACATGGCATGTTTATTACTAGAAGATTAGAGGGCAAAGGGACCAACAGCCTGAAGATTAGAATCCAATGCCTTAGTTTACTTTATTTTTGGTGTAAACAGGATATTGTAGGGTATAAAGTAGACATAGTTGACTTCATAGGTAACCTTAGTTTACTTTATTTTTGGTGTAAACAGGATATTGTAGGGTATAAAGTAGACATAGTTGACTTCATAGGTAACTTGTAAAGTTTTTCTGTTGAGTAGTCCTCACTGAGGAAAGTGCACATACCATGTGGATTGTAAATGTTCCTATCATCTTTTGTTGATGACTTTTTTGTGAATACAAAGTTGCCTTTACTCCAAAAAATAAAATAGTTTCAAAGGGCATTTTTCAACATTACACACATCTTTAGTTTAAGACCACAAAATTCAAAAGTCTCCCTTATTTCTTAATCTTAGTGCCTAGTCAAACTAAGATAGTTAAACTGAAACAGAGGGAGTATTAGTTGTATATACTTTATTTATTTTTCACTTTCATTTTTATTTGGTATGATGATGATATGAGTTGAGCTTAAATGGAGAGGTGAGGATTCATATAGCCGACCCCGATATCGCCGACCGTGACTTGCTTGGGACTGAGACATAGTTGTTGTTTGAATGATAAAGAGATGGAATGATAATTCACATTCTCCGACCTGATGCTCAAATCTGATGTTTCGGAGACTTCTGGTTTATAGAATGTATTTACTTTTAAGTGTTATCTTGTACTTCAAATATTCCAGTGGCTGTTCCATTACCCTGATTCATTTGGGAAGACATAAGCCTCTTTAAATTTATACATGTGTTTGTTATGTGGTTCAACACTTTTGATCACCTCACCTGCTACAGATAATTTTAAAGAAGCCCGACAAGGCAATTTTGGTCCTAGCTGATGCATGCTAAATCTGAGGTGTTTCCTATTCAGCAAATGTTAGATTACTAAATGTGTATTTTGTGTTCTCCAAATATATGATTTCGTCATCTGCTTATCAGTTTAGTATATGCTATTTGGACGTTGAATCACGTGTATTAACTCAATTCTTCTTCATCTAGTTCAGTGGCCCTGGAAAGTGTAAGAATGTTTAGCCTTAAGATAGAAAATCTGGCTAATGGTGCATTTAGTTGTAACATAATTCAGAAACATTAAAAAGCAGTTAAATCTCTGACTTCCATGTGCGATGGGATAGTCTTTTAGCTTCTAAGGTGTTAGGCATGTCATGCTCTCCAAGATGTACTGGAGAGAATGTCTTATTCCATTAAGATATATATATATTTCCCCTTCGGTTAATTTATTTTCTATTTTAGAAAGACAGTGGAAAGATATTTGGTGACCTTCAGACACGTTATACAACTTTTATCTTGAACTGTGTGAGAATCTACTGATAATATGGGATCTTATGTGGCAGAAATGAGGTCTTTCTTTGTTAAATGTTATAATACTTATTTCCTACTATTGCAGAGGCTCCTTCATATACAGAGGTGGGAATGCCAGCTTTGTCCCCTACAATGGTAATCTTAGTGGCATTATTTCTATGAATGATGAAGTTTTCTGCTTATCATTTCCTTATTATTGTGGAAATTCTTAACTTACATGTTCATCTCACTGCAGACTCAAGGTAATATAGCAAAATGGATAAAGAAAGAGGGGGACAAGGTCAGTTGATTTCATGGCTACCGAAAGTTAAATTAGTACAATCTTTTAGACAAAGATAATGCCTGCTGAAGTATAAAGGCTCAACAACTAACATTTCTATTTTATTACACTTTGTTAAATTCGGATTTCCTAACAGATTCAAGCAGGGGATGTACTATGTTTGATAGAGACTGATAAAGCAACGCTTGAGTTTGAAACTCTTGAAGAAGGGTAAGCCTATATTCCAATTGTGCTGTATTTGCTTAGAACTTAAAAAGAGAAGATTTTCTTTTGACAAGGTAAGTAGTGTTCTTTTATGATGTTATTGCTTTTCTTTACGTACTATGTGATTAGTTTTCTTCCTGATGCTCTTGCTGTTCATAAATGCCTGAAGTACTCACTCTAACCATCCTGTTAACGGATGCACTTCTTTAATGTAATTGGTTTTGTTGTTTGGGGATATTATTTGCAGTTTCCTTGCAAAGATATTGGTCCCTGAAGGAACAAAAGATGTACCGGTGGGACAGACTATAGCAATTACGGTAATAAGAGTTCTTAGATATTTCTCCTGCCACTTTTCGTCTTTATTTTCTATTTTGTGATTATCTCCATTCAGTCAAGCACCACAAAATATAAGTGATAATGCTGCATTTTTCTCTTTTTTCTTTCGCTTCTTCTCTGGAATTCTTTGCTGCAAAATGGAAAAAGAAGTCTGTGTTACGCCCCAAGAATTTTTAATCATTTTTTTTTTAAGTTCCTATTATTCTTTTTGTTCGCATTAACAGTAGGTAGCTTAAATGGAATTGTATAGTATCTCTACTTTTTTGGTGTAAACAGCTTTGTATAGATGATATAGAGCATATTATAGATTTGATAGGAAATCTATAATTATTCCTTTTTGGAGGTAGCTAGCATACAGGTATGCTGAAGAATTCAACCTCACCAGTTTCAATAAAAAAAAAAAGGTAACTTAAAAATTCTCATTTTGGGAAGTGGCTGTTCTCTCTGAAAAGTTGTCAACTCCTCCCCCGTTTTAAAATAGTTGTATTCTAACAAAAAAGGCACAGGCTTCTTTGGTTTGCCTATCAGAGACCTGACAGTTGGAAGACTGACACTCACTAGAACAACAAACCGATAGATCAAAGCAGGTTGAAATTGGTGTAAATATGAAAAATTGAAGACTAAGTACATTCCCTCGTGGAAATTGTAGTATTTGTTTTTCTGCAAGTATTGTAGCTACTATCTGATAAAATCAAATATTTTTACATTCTAAGCTTTTCCTGCTAATAAGACTACACATTGCTCTCTTTCTTCAGAAGTTTACTAAAGCCACCATGCTATAAGTATCAGCCAAAGTTCTCTAATTATCAGTCCTTTGTGTCGTGTTTTTGAAGGAAAGCCATACTACCTATGTTTATCTATACAACATTGCTCTTTAAGCCCTAAACCACGAAATGGGTTTGCATTGAACTGTTGAAAGTCAAGCAACCTTGCATTTTTTCTCTCCAATCAGAAAGCATCGTCCTTTTATTGAATTCCAACAGTGTTTGAGCAATTGGAACGGAAGTCGAGAGTTCGTTACACAGGATTGACTGCTACATACAAATTGCAGAGATGATAGAAATGAAATGGCAAGAGGTAGGCAGTCAATGATTCTCTGTTAAGTGATAGTATAGAGGCCTACTTAATGGAGGGGATTTAAGGCCTGATTGTAAATCAGTTTGGAAGACTGAAGCACCTGAGAAGATGGTGTGTTTGAGATGATATATTACGTAGGATGCTGTCAGCAAACAATCTGAGGAAGAGAACGAATATATCCTGGACAGGAACCACCTCATAGTACACTGTAGTTTGCATCAGATATATGGGCATTCATATTTTCCTTGTTTAACTATATTGGGTTTTACTAGATAGTGGCAAATGCTGTAAGAAGTAGTGTTTTTTTTTTGAATCTAAAAAGAGGATGGAGGCGAGAAAAAGAAGATACGGAAGACAATTTCATTGTGCATTCTTGATGATTTGGTTGGAAAGAAGTATATGAATCTTATAAGGATTTAAAAGACCAGCATGGACTCTAAAGGAAATCCTTTTGCTTCACTTGTATTTTGAATTAAATAAATTTTTTCTTTTTGTGCCAATAGTTGGTTAGTTTTTTTGTGATAGCCGAATATTATATATGCTGTCACTTTGAAGCCATCTTGGTTAGAAATTAATTAGAAGTCTTGACTTATCTAAAAGAGTCCTTGTATATCAAAAGATAATTATGAATTTTGATGGATTAGGACACTTCCGTCCTTTGTACTAAAAAAGAATGGTATCAGGTTCTCCTCTTCAAGTATGAACTTGGAGGAGAAAGTAATGTATGCATCACGCAATATATTGATAGTGTCCCGCCTTGAGAGACAACTGCTAATTTCTTTTGTTGTCTTCTTTCTTTCTTTTAAGAGCAGAACTTTTTTCGTTGGTATTCTCGACTGAGTTTAACTCCATTTGTAATGAAGGAAAGGTTTCATTAAAAAAGCATCTAGAAGATGCAAAAGAAGTTGTCTTAGCTCCAATACATGAGAAGAGACTATGATAGGATTAGGGAGCTAATAAAGACCAAAAATTGGCCAGAGCTGTTTACAGGGGTTCAATTTCTCCAGCAAAACAAGTTAAGCAAACATCTAGCTTTTAGGGAGTGTAATGGCATTGAATTTCGTTTTAAACATTTCAGTTCCTTTCTGTCCAAAAAACACTAAAAGATTCTTGGAGGATTATCAATAGATCTTCTTGGTGGCTTTGCCGACTCTCCATAAGCACCAAGTTGAATATGCTTCTTTTTTTTTTTTAAATTATTGCGAGTGGGGTGACCCAGAAGTCCCCAAAAGATGTTCTAGCTACGAAGAACGAGAGGAAGAAAAAGGTAAAAAAAAAGGAAATGGAGGAAGGCAAATGTATAATATCTTCAACTCCATTTATTTGCGGACCAACTCTATCCAGGAGCAAACTGGTAGTCTCTGTTACAATGTTTCTATGTCGTGAAAGAGTTTACCAACTAGGAGGATTTTTTGTCAAATGAATCTTACTGTAGCAGTTCTGTAAAGAATTCCCTGACATGATTGAGATCGAATGGAAGTAGCAAAGATGAAAAGGCAGGAAAGTATTTTAAGCTCAAACTGAAGTTAATAAGAGTGCTTACTGAATACTTTAGGAGGTAAACTCAAGTGGAAACAAGACAGCCTTCTAATAGAAATGGATCCTGGTTTGGAAGGATCTTTATAGACTGCCTAATCCCAGTTTTGTTTTCCTTTTTACTTAAATATAGCCATAACGACAATAATTATCTCATGGCTAATTAGACATGATTGAATGCTTTAAATCTACTAGCAAGTTCTTGTCTTTTGGTTCCTCAATCAGCAGCTCATTTCACTAGAATTAACTAATTTCTCTACCTTAATATGAACTAAACTATGTTCCTCGTCAAAGTTAGGATGACTGTCACCTTTAGATTAAATTCTTGCCATGTTTTTCTGCCTCACTATATTGGATGTCTCAGAGCCTTCTCATTTCCTACATGCTTAGCTTAATCGGGTTGTGTAGACTGCCATGGGCATCTCTTATTGTAAATATTTTTCGCTAATTTGAGTAGGTGGAAGAAGCAGATGACATACAAAAAGTCCCTGCTACCGTTGGTGGTGCATCAGAGGTTAAAAATCAAGCATCTTCTCAGACAGATGCAGCAAGGGGAGATGGGGCTACAGAAGTGAGTCCTGCGAATATCAGCTCATCTGAACTTCC</genome_strand>
        <mrna_strand>TCGATGGCGCTCTCTCGACTTCGTCATCCGTTGATTTTCCGAGCTCCGTCGCTACTCCGAGCTCGCCGTCTTCTCGCCGCCGGGCCTTGTAACTCCTCCACACTCCGATCGCTCCATCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCCTGGGGTGCTGAATCAAATTCCTGATGTGGATGCTTCTTCATTAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTTAAATTTCCGCCTGCTCAATGAAGTACATGTCGTACCATCTAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCTCCTTCATATACAGAGGTGGGAATGCCAGCTTTGTCCCCTACTATG....................................................................................................ACTCAAGGTAATATAGCAAAATGGATAAAGAAAGAGGGGGACAAG............................................................................................................................ATTTCCTAACAGATTCAAGCAGGGGATGGACTATGTTTGATATAGACTGATAAAGCAACGCTTGAGTTTGAAACTCTTGAAGAATG.................................................................................................................................................................................................................................................TTTCCTTGCAAAGATATTGGTCCCTGAAAGAACAAAAGATGTACCGGTGGGACAGACTATAGCAATTACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAAGAAGCAGATGACATACCATAAGTCCCTGCTACCGTTGGTGGTGCATCAAAGGTTAAAAATCAAGCATCTTCTCACACAGATGCACCAACGGGAGATGGGGCTACAGAATTGAGTCCTGCGAATATCAGCTCATCTGAACTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U322022" ref_strand="+" ref_description="SGN-U322022        Tomato 200607 #1 [8 ESTs aligned] arabidopsis/peptide: | Symbol: None | phosphorylase family protein, contains Pfam PF01048: Phosphorylase family | chr4:12609538-12611477 FORWARD | Aliases: T22A6.180, T22A6_180(evalue: 3e-113, score=405) genbank/nr: gi|21593613|gb|AAM65580.1| unknown [Arabidopsis thaliana](evalue: 2e-111, score=405)">
      <seq>aaaaattgtaatgtagaccgtcttcctgatgaatacgaaaaattccgactccaaccctacttccattagaaaattgataaaccttttgtgtaatttttttgttatatataactcaacattgttaagcctaaaattatggacaaaacttgttgcagttcaataaaaaatggctgcaaaacaagttgtccttctatttactcttatattggctttgggatttatcccttttcttgtattttctgcacaagcaattccatttgaaagatttgaatctttaagagttgtcaaaaaagttaataaaaatggtccttttcttggacttatcacagtgtatgcaccagaagaagaagctttctttaaaactggtgtttttaggcctgatcctagacacccctttgttgacttatcaggtagacgatttcgaattgggaaagttgagggcaaaaaagtcatttatgtgaaatgtggagttggattggtgaatgcagcagcagcaacacaacagatgttggacttgtttgacataaaagggataattcattttggcatctctggtaatgctaacagttctatgcaaattggagatgtcacaatcccagggcagcttgcacaagcagggctttgggattggctgaaaccaaatgcaactatggaaccaaatgattttgctcaatttaatttcaagagctacaatgatcctaaaggaggggaaaatcagttgggaaaagtaggatatagcactgaacagttttactcagttgcaggggaagtcaatgtgcctcaaagaccagtttggtttaacataaccaacaattggcttcatttagcctctcatttgcatgggataaatcttgatcaatgtgcaaattcaacgttgtgtctaccagaaaagccaaaactagttgttggattgaagggagctacttcaaattttttcattgacaatgcagcttacacacaattccttttcaatacttttggtgtcacatcacttgacatggaaagttcagctgtagtaatgacatgtttgtcaaatggatatccagttattgcaattcgtggattatcggatttagcaggaacacaaaaaggggataacacaataagattatttggctctttagctgctctaaatacagcaaaagttgtaattgattttgttaagtcactcccgataaatcacgtttcgcaattctagctaaaatattatcggagatgaatttagagcaggttctataagtttcaactaaacttattaatattgctccaattatgtatttgtacgcataaaaatatttcaatgtatacgtataataagatcacacgcttattatgaatcaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0143O06.1" temp_strand="-" temp_description="C11HBa0143O06.1  AC220058.1 htgs_phase:3 submitted_to_sgn_as:gi|170933588|gb|AC220058.1| sequenced_by:ivf-caas upload_account_name:china11 Solanum lycopersicum chromosome 11 clone C11HBa0143O06, complete sequence">
        <position start="112239" stop="14283"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111939" g_stop="111530" g_length="410"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="410" r_length="410" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="111529" i_stop="111436" i_length="94">
            <donor d_prob="0.567" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111435" g_stop="111368" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="411" r_stop="478" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="111367" i_stop="111024" i_length="344">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="111023" g_stop="110868" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="479" r_stop="634" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="110867" i_stop="110491" i_length="377">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="110490" g_stop="110284" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="635" r_stop="841" r_length="207" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="110283" i_stop="109543" i_length="741">
            <donor d_prob="0.938" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="109542" g_stop="109363" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="842" r_stop="1021" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="109362" i_stop="109093" i_length="270">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="109092" g_stop="108774" g_length="319"/>
          <reference_exon_boundary r_type="cDNA" r_start="1022" r_stop="1340" r_length="319" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="108773" i_stop="106715" i_length="2059">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="106714" g_stop="106697" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="1341" r_stop="1358" r_length="18" r_score="0.722"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0143O06.1" gen_strand="-" ref_id="SGN-U322022" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1358</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0143O06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U322022" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111939" e_stop="111530"/>
          <exon e_start="111435" e_stop="111368"/>
          <exon e_start="111023" e_stop="110868"/>
          <exon e_start="110490" e_stop="110284"/>
          <exon e_start="109542" e_stop="109363"/>
          <exon e_start="109092" e_stop="108774"/>
          <exon e_start="106714" e_stop="106697"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAATTGTAATGTAGACCGTCTTCCTGATGAATACGAAAAATTCCGACTCCAACCCTACTTCCATTAGAAAATTGATAAACCTTTTGTGTAATTTTTTTGTTATATATAACTCAACATTGTTAAGCCTAAAATTATGGACAAAACTTGTTGCAGTTCAATAAAAAATGGCTGCAAAACAAGTTGTCCTTCTATTTACTCTTATATTGGCTTTGGGATTTATCCCTTTTCTTGTATTTTCTGCACAAGCAATTCCATTTGAAAGATTTGAATCTTTAAGAGTTGTCAAAAAAGTTAATAAAAATGGTCCTTTTCTTGGACTTATCACAGTGTATGCACCAGAAGAAGAAGCTTTCTTTAAAACTGGTGTTTTTAGGCCTGATCCTAGACACCCCTTTGTTGACTTATCAGGTCGGGGTTTAACTGAATTCATTACTTTCAACTCGAGTATTTTTGTGCAGTGAAAATCTGAATTTACTGACTCTAGATTCTGAATTTGTTGCAGGTAGACGATTTCGAATTGGGAAAGTTGAGGGCAAAAAAGTCATTTATGTGAAATGTGGAGTTGGATTGGTGAGTTTTTTTCTTATGAAATCCTTCTCTCAAAAAAGTTAATGGATATTTTCCTTTATTTTTAAATAGTGATTTTATTCTTGTCCTCTTGTTGATGATAAGAGACAAGTAAGCGTGATGGTCAAAATTTTTTCATTCTGTTTTCAATTTAACTTTTTTGAAATGAAAAATTTCTTAACAGAGAGTGTTTGATCTGGTTCGAATCTTGAATAGTGGGTCAAAATAAGAAATAATTATAATTCAGTTGGTTGACTATTTAGATTTTCACTTTATTGGTGAGAGTTCGATTTTATGACCGTTGTTATAAAAAAAAATTTGATGAAATCATTGATTGGTGTTCTTAGGTGAATGCAGCAGCAGCAACACAACAGATGTTGGACTTGTTTGACATAAAAGGGATAATTCATTTTGGCATCTCTGGTAATGCTAACAGTTCTATGCAAATTGGAGATGTCACAATCCCAGGGCAGCTTGCACAAGCAGGGCTTTGGGATTGGCTGGTAAATAATTCTTGTTCGGACTTTTCGAAATTGTTAATGTATTCGTGTTAAATACTCTAAAAGTACCTAGTCCGAGCAACATCTAGTAAACGAACCTTTTTTGTATTTTTATTATCTATATTGTTTGGATCCTCTAAAAGTACTGTCACACAAGTGTCTGTATCTCCAAAAACGCATTAATTTTTGAACGATCCAACACATATCTGTCAATATTTTTGAAGAGTTTGAGCAAAACATCAAACAAACCTTTTATTTTTTATATTTTTATCCGTATTGCTTGGACCCTTCAAAAATGCATAGCTTCTGAAGAATCTGAGTAACGTAGATTTCCGTCTTACTCAAATAGTTGGCTCACATAATTTTTATTTTTTTTACAGAAACCAAATGCAACTATGGAACCAAATGATTTTGCTCAATTTAATTTCAAGAGCTACAATGATCCTAAAGGAGGGGAAAATCAGTTGGGAAAAGTAGGATATAGCACTGAACAGTTTTACTCAGTTGCAGGGGAAGTCAATGTGCCTCAAAGACCAGTTTGGTTTAACATAACCAACAATTGGCTTCATTTAGCCTCTCATTTGCATGTAAGTAATATTAGTACCATCGAATCAGGTCAATTTGCACGCACTTTAATTATACCTTCGATTATATTTATTATCTCTCCTTGTATAGGTGGGATCTGAACCCCCTTCGTCAGTTATTACATTATATGTATATAGTAGATGATGAATCCCTTGATAAAGATTAGGCATAATGCATAAACATGACTCTTAACTTTGTTTCTGCAAATAACTATGCCCTCCAACGTTGAGTGTGTATAAGTAGACAGTTAAACTTATATAAAGTTGAACAAGTAGACACGCGCGACCTACATGACATAATACACGTAGGATGCAGGACGTCACGTAAGATGCAAAATTGTCATGTAGGACGAATGTGTCTATTCGATTAATTTTAAACAAATTAAATGTCTATTTGTTCATACCAATGTTAAAGGTCATAATTATCGACTGAAGTCAAGTAGAGAGTCATCTTTATGTCTTCGTCACTAAGTACAAATACCAGATAACTATACAGTCTATATCCATCAAGTGGAGACGGATCTAGGATTTAGATTTGACAGCTTCAAGTTTTAAGTTTTTACATTGCTGCGAAAAAACAATTTTCTTGAACCGAAGGTCTATTAGGAACAACCTCTTTACCTCACGGAGATAGGAATAAGATCTCCGTACACCGAACCTTTCCAAATCTCACTTGTGGAACATCTTATACCACTTCTTTATGGTTATTTGTTGTAATTATGATGTGTTGGATGAAATTAACAGGGGATAAATCTTGATCAATGTGCAAATTCAACGTTGTGTCTACCAGAAAAGCCAAAACTAGTTGTTGGATTGAAGGGAGCTACTTCAAATTTTTTCATTGACAATGCAGCTTACACACAATTCCTTTTCAATACTTTTGGTGTCACATCACTTGACATGGAAAGTTCAGCTGTAGTAATGGTAACTTGCTTTTCCCGTTTAAGTTATATAAATCGTCAGTATAAAATATGATTAGATGGCTGATTGAAAAACACTGACTATAGTTAAACTCATAATATACCAGCTTTATTTGTCTTTAACTACGTGCAACCGTTCATAAAAAGTAGATAAGTAACACTGAAAATAAGACAGTTACTTATTATAACATGTTAAAATATATAATCAATCTAAATTTAAATATATTTTTTGCAATATTTATGCATATATAAGTTAATTTTTTTTTTTGTGTAGACATGTTTGTCAAATGGATATCCAGTTATTGCAATTCGTGGATTATCGGATTTAGCAGGAACACAAAAAGGGGATAACACAATAAGATTATTTGGCTCTTTAGCTGCTCTAAATACAGCAAAAGTTGTAATTGATTTTGTTAAGTCACTCCCGATAAATCACGTTTCGCAATTCTAGCTAAAATATTATCGGAGATGAATTTAGAGCAGGTTCTATAAGTTTCAACTAAACTTATTAATATTGCTCCAATTATGTATTTGTACGCATAAAAATATTTCAATGTATACGTATAATAAGATCACACGCTTATTATGAATCAATTTTCTCTTTGCTCCATAATGTTCAATTTTTTAAAATTAGAATTTGATAAATTTATAGGATCTTTGATTTAATATTAAAAAATTTACTATTATTACCTGTTGTACTAATGACTAAATATGCATTTTACATAATATTATCATATTTTACTCAATCATGAACCCAAACAGACCTACTATTTTTCATTCAAATTCCTCAAAAAATTTTTGCAAACTCAAAAAAGATAAATAAGAATAACAAATATAAATTTTATTTGACCATCTTCTTTTTCTTATTTATTTATTATTTTTCCATATATTTCCCATTCATCATTGTTTATGTATGAATATGCTATTTAAAAAAATTGAACGTGTTATAATACGTATGTGGTCCAATAATAATAAAGTAAAATAAAATATACTAAAAAACGTAATTTAATTATTTAAAAATGGGAGAAAAAGATATTAGTACATTAATTTGGAAATATAGGGTTTGCATTAGTTACACTCGAAAAATTCTTAAATTTACAAAGAAATTATTTGATTCGAATATAAATTAAATAAGAAACTAATTATATCATGTAAATTATAAATATTAAATTTGTTGAAGTGCGTGAATAAGGTAATTAAAAATTCTAAATACTTTTATAAAGGACACAATATAGGAGTTGGTGCCCAATAAATTATTAAATTCGTTAAATTAGTACATAATCTGCAAACATGAAGACAAAACCACCATTCATGATAAGAAAGAGCCATTTAGACATTCAATTAAATACATTTTTTTTTTTTAAAACTTTTAATCACTTCTTTCACATTTTGTTTATTTATTTATTTATGTTAAACTGGAATAAAGAAGTGGATTAAATTATTAATTCCCCATAGGCATCAAAATTAGACCAAAAGAATCATTGCCACCAACCCCCCTACTTTTTTTCCTAGCCCACCCCTATTATCGTAATATCATTATTTTCAGGGAAAATGGTTTGATATATTCCTCAACTTTTATTATTTGGAGCTGATATATCCCTCGTTATAAAAGTGGCTCATATATGTCCTAAACGACTCACATATACCCCTGCCGTTACAAACTGACTTACATATGCCCTTCATTGAACGAAAATTAAAAAATTAGTTTTAAATTTATATTTATTATTTCTAATTTAAAAAATAAAATAAAATTAGGGGTATATATAATTCTTCTATCAAAATTCAAGGTATATTTTAATTTTTTTCATACATAAATTATTTTTTGACTTCTTTTACTTTAATTATTTGAGTTTCTTATTCTTATTTTTTTTTCTTACATTCCTTAGTTTAAAGAAAAAAAGTTAAACTATTTTTTTGTGTGTATTGTAATTTAATTTCGTATCGAAGAAAAAGTTTGGTCATCTACAACAAGTTTTACAAGAATATCAGTGAAACATAAATAAATTTGATTATCAAAATAATAATTATAAATTAGTCATTAAAACAAAAAAAATCAAAAAAAATATGTTTGACGAGGACTAAATTTAATCATATGGGATTATATTTTTTTAGAAAAAAATAATAAAAATTTAGATTAAAATTATTCATTTCCGTTTAGAGAAAAAGGGTATATGTGAGCCATTTGTTTATAAGTAGGAGTATATATGAATCACTTTCGTAACAAGGGGCATATCAGCTATAAATGACAAAGTTAAGGAATATATCAGACCCTTTTCTCTTATTTTCATTTCAAAAACTTAAATAAAAAAGAACAAAATAATTTATAAGAATAATCGAATTGATTAAGCAAGTAGAGATCTACTGAATACTATCTCGATGTCTTGCAAACTATTACATCGAATCAAAGTTTATCTTATGTAAATTTTCCTTATTTACAAAAAAAAAAAAACTATACAACATATTACCATTATTTCACAATAATTTAATTATAAACTAAAGTAATAATAGTGTTATAAAATTAAATACATCTTATAAAGTCGCATAAAATTTTGATATTTTGAACCAATACTCAAACATAAGGGACCATTTTTGCCATTTGCTAAAAGTTATTGGGTTGATATATATTTTTTATACTTTGTATATTGTTTTCAGCGAAAAAAAAAAAGAGGA</genome_strand>
        <mrna_strand>AAAAATTGTAATGTAGACCGTCTTCCTGATGAATACGAAAAATTCCGACTCCAACCCTACTTCCATTAGAAAATTGATAAACCTTTTGTGTAATTTTTTTGTTATATATAACTCAACATTGTTAAGCCTAAAATTATGGACAAAACTTGTTGCAGTTCAATAAAAAATGGCTGCAAAACAAGTTGTCCTTCTATTTACTCTTATATTGGCTTTGGGATTTATCCCTTTTCTTGTATTTTCTGCACAAGCAATTCCATTTGAAAGATTTGAATCTTTAAGAGTTGTCAAAAAAGTTAATAAAAATGGTCCTTTTCTTGGACTTATCACAGTGTATGCACCAGAAGAAGAAGCTTTCTTTAAAACTGGTGTTTTTAGGCCTGATCCTAGACACCCCTTTGTTGACTTATCAG..............................................................................................GTAGACGATTTCGAATTGGGAAAGTTGAGGGCAAAAAAGTCATTTATGTGAAATGTGGAGTTGGATTG........................................................................................................................................................................................................................................................................................................................................................GTGAATGCAGCAGCAGCAACACAACAGATGTTGGACTTGTTTGACATAAAAGGGATAATTCATTTTGGCATCTCTGGTAATGCTAACAGTTCTATGCAAATTGGAGATGTCACAATCCCAGGGCAGCTTGCACAAGCAGGGCTTTGGGATTGGCTG.........................................................................................................................................................................................................................................................................................................................................................................................AAACCAAATGCAACTATGGAACCAAATGATTTTGCTCAATTTAATTTCAAGAGCTACAATGATCCTAAAGGAGGGGAAAATCAGTTGGGAAAAGTAGGATATAGCACTGAACAGTTTTACTCAGTTGCAGGGGAAGTCAATGTGCCTCAAAGACCAGTTTGGTTTAACATAACCAACAATTGGCTTCATTTAGCCTCTCATTTGCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGATAAATCTTGATCAATGTGCAAATTCAACGTTGTGTCTACCAGAAAAGCCAAAACTAGTTGTTGGATTGAAGGGAGCTACTTCAAATTTTTTCATTGACAATGCAGCTTACACACAATTCCTTTTCAATACTTTTGGTGTCACATCACTTGACATGGAAAGTTCAGCTGTAGTAATG..............................................................................................................................................................................................................................................................................ACATGTTTGTCAAATGGATATCCAGTTATTGCAATTCGTGGATTATCGGATTTAGCAGGAACACAAAAAGGGGATAACACAATAAGATTATTTGGCTCTTTAGCTGCTCTAAATACAGCAAAAGTTGTAATTGATTTTGTTAAGTCACTCCCGATAAATCACGTTTCGCAATTCTAGCTAAAATATTATCGGAGATGAATTTAGAGCAGGTTCTATAAGTTTCAACTAAACTTATTAATATTGCTCCAATTATGTATTTGTACGCATAAAAATATTTCAATGTATACGTATAATAAGATCACACGCTTATTATGAATCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U320992" ref_strand="+" ref_description="SGN-U320992        Tomato 200607 #1 [10 ESTs aligned] arabidopsis/peptide: | Symbol: None | ribosome recycling factor family protein / ribosome releasing factor family protein, similar to SP:P82231 Ribosome recycling factor, chloroplast precursor (Ribosome releasing factor, chloroplast) (RRF) (CpFrr) (RRFHCP) {Spinacia oleracea}; contains Pfam profile PF01765: ribosome recycling factor | chr3:285905-287957 FORWARD | Aliases: F28J7.13, F28J7_13(evalue: 3e-74, score=275) genbank/nr: putative(evalue: 2e-72, score=276)">
      <seq>ctcgaccatagaagcaagcatatatctacacgaaatgcttgtgataagacctgtataaattttgaagggggcctcaactcgacgagcattagcagcttaccgcaacatctatggtgcattacgggctaccaatttcactgcaaatcgtttgataggctccactttgagtccaattcgctatgaaactgttccctgttcgctggagcagaccaccaattttctgcttgaaagtcggaggagttttgctaaaggaaggaaacaaattagggaggaggtagatggtgatgattatggaagtgtaaccacagctgtaaacgtaggtcctaacattaaagctactgcagtctcacagatggaggcagcaattgatgcattatcacgagaattgaccaagctgcgaactggaagagcatcggctggaatgcttgatcatatcatcgttgattcaggaggtgttaagacacctctttgcaggatggctgtcatttcagtgctagacccaaaaaccttgtcagtgaatccttatgatccagattccctcaaagagttggagaaagccattatttcatctccattggggttaaatcctcaatccgacaaccagagattaattgtaccaatacctccgttgactaaggagcatgtgcaggctgtgtgcaaagtggttgcgaaatcatctgaagacgttaagcaaagtataagacgagcacgccagaaggctttggacacgataaagaaatctgtgcccaagaagaaagacaaagacaagtcagcttcagctttctcagaagacgatgcaaaaagactggagaaggaaattgatgacttgacaaaaaagtttattaagtcagcagaagatatgtgcaagtcaaaggacagagaaataactagcagttgaagaaactagttttagtttcatcggaggctcacgcaaaggttcaattttttggctgaagctatagagggaattatttactctccagaattcttgtactcgaagtcggaaaaagataacaagacatgttacaacttacaagtgatcatgctaatacttgaaaagaaagatattgtatttcatataacctatgctgnntggtttttagcttttcatgttcaggatcatatatcatttcattttgtgaaagggctgagatcatgtaacttttttttatatataaatcaaacaactatttgttctctaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0143O06.1" temp_strand="+" temp_description="C11HBa0143O06.1  AC220058.1 htgs_phase:3 submitted_to_sgn_as:gi|170933588|gb|AC220058.1| sequenced_by:ivf-caas upload_account_name:china11 Solanum lycopersicum chromosome 11 clone C11HBa0143O06, complete sequence">
        <position start="113413" stop="118710"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113722" g_stop="113915" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="73" r_stop="266" r_length="194" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="113916" i_stop="115068" i_length="1153">
            <donor d_prob="0.379" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="115069" g_stop="115221" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="419" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="115222" i_stop="115306" i_length="85">
            <donor d_prob="0.887" d_score="1.00"/>
            <acceptor a_prob="0.874" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="115307" g_stop="115422" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="535" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="115423" i_stop="115604" i_length="182">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="115605" g_stop="115696" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="536" r_stop="627" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="115697" i_stop="116096" i_length="400">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="116097" g_stop="116118" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="628" r_stop="649" r_length="22" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="116119" i_stop="116186" i_length="68">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="116187" g_stop="116255" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="650" r_stop="718" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="116256" i_stop="117817" i_length="1562">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="117818" g_stop="117916" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="719" r_stop="817" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="117917" i_stop="118027" i_length="111">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="118028" g_stop="118410" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="818" r_stop="1200" r_length="383" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1201" polyA_stop="1210"/>
      <MATCH_line gen_id="C11HBa0143O06.1" gen_strand="+" ref_id="SGN-U320992" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>1128</cumulative_length_of_scored_exons>
        <coverage percentage="0.932" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0143O06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U320992" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113722" e_stop="113915"/>
          <exon e_start="115069" e_stop="115221"/>
          <exon e_start="115307" e_stop="115422"/>
          <exon e_start="115605" e_stop="115696"/>
          <exon e_start="116097" e_stop="116118"/>
          <exon e_start="116187" e_stop="116255"/>
          <exon e_start="117818" e_stop="117916"/>
          <exon e_start="118028" e_stop="118410"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCAACTCGACGAGCATTAGCAGCTTACCGCAACATCTATGGTGCATTACGGGCTACCAATTTCACTGCAAATCGTTTGATAGGCTCCACTTTGAGTCCAATTCGCTATGAAACTGTTCCCTGTTCGCTGGAGCAGACCACCAATTTTCTGCTTGAAAGTCGGAGGAGTTTTGCTAAAGGAAGGAAACAAATTAGTACTGATTCTATATGCCTTTCTTATTAATCATCCAATTTATGTGGATATATTAACGCATGTTCTTTTTGATTTGTTGATAATGTGTTTACATTTCTAGCATTTAATAAAGTAGGTTGAGAATCGTGAGGTTTCTGATTCAAATTTAATTTTAACAGAGACATAAACACTAGGTGATTTTTTCCTGTCCGTCTCGGCCTTGATGGCCGTGTTATACGGTACTTGTTGTTGGTGGGAGGTGGCAAGTATCCATGGAATGGAATTAGTATGAGGTATGCGTAAGCTGGCCCAAATGCCACAATATTAAAAAATGAGTTTACATTTCTAACTCACCAAGCTAATAGCTTAGTAAAGAAGAAGCAAGGTTTCATGATTTTGTATATGAAAAAAGAGTTCAAGTAATTGTATATATACACAATAAGATCATTTTATAAGTACTTATAGGAAACTGAAAATAACTATATGATAAGCATTAATCAATAATCTGTTAAAAAGGGGTAATTTAACAAGCAAGGGGTTTCCCTTCCGGCCGAGCTCGCCCTGTGCAGGTTACTTCTACTGTGTGGTTTACTATTGCATAGAAGTGGAGGTTTTACCTTGTGTGCACCCAAAGGGTAGTGACTGCGGTTCTCCTTGTCATAAAAAAAGAAGGGATAATTGACCTACTATCACATGTTAAACTTCTCTCCGTGTATATAACTTAAATCCTTTGAAAAATGAGTTTGGCTTGTATACATTACACAAATGGTGCTATCAGGCCAATTAAAGAATTTCATGAATAGTGTGATTTGTAATCTTGAATTGCCAGAATAGGAAAGATTACCTGACAGTGTAAAAATTATTTTCAAACCATCAGTGGAATTAGATAAACTCATAATATATGTTAGAATACATTACAATTACTCAAATGGTTGGGCACACTTTTAATTTCCATTAATATCATGTGTGAGTTTTCTCTTGTTTAGGTTTGCTGCTATTCATTTGGGATATTGTTATAATTTGTAATGATGGAACCTTTCTATTTTTGGTATAAGTTTGGAGGAAATATAATATCGATTGACGATTGAACGTTCTTTGTAAAAATCATCTCTTTTGAGAGGCAACATGCTTGAAGTTTCTGACCTCTTGCTATCTGTTGTTTGATGAATTTGTAGGGGAGGAGGTAGATGGTGATGATTATGGAAGTGTAACCACAGCTGTAAACGTAGGTCCTAACATTAAAGCTACTGCAGTCTCACAGATGGAGGCAGCAATTGATGCATTATCACGAGAATTGACCAAGCTGCGAACTGGAAGAGCATCGGCTGGTACATGATATCAACTTCTGTTGTAATACAATTTACCTTGTTTGCCTTCAATTGGACTCATTCGTACAGATTCTTGGATTCACAGGAATGCTTGATCATATCATCGTTGATTCAGGAGGTGTTAAGACACCTCTTTGCAGGATGGCTGTCATTTCAGTGCTAGACCCAAAAACCTTGTCAGTGAATCCTTATGATCCAGATGTAATTTATACACTTAAACTCATATGCATATACTGTCTGATTTTCGATATTTTTTCCATTTGTATTCATTTTACTTGATTAATGGAACATTTCTTTATATTTATTCTGAGTGCAAAAAAATTGAAACTGAAGTGTACTTTTGATGAATATGCACCATGATCGACTGTGATTGTCTTTTGCAGTCCCTCAAAGAGTTGGAGAAAGCCATTATTTCATCTCCATTGGGGTTAAATCCTCAATCCGACAACCAGAGATTAATTGTACCAATACCTCCGTAAGTATCCATTCGAAAGAGTAAAATAGTCTCTTCTTTGTTTTTGGATCCATGATCCATCTATTAGTCAGGTGACTGTCAAAAATAGAAGCAAAAACTTAATTTTGGTCTCGACTTGATAGTATACTATAACTTTCATGTTGCCATTATTTACATGAAGAATGGCTTGAAGTACATTGTGTTGATGTAGAAAAAACATTATTATAACACTTCTTCAAAATAATCATTCTCCCCAGGGATATAACTACTTCAGGCGATTAACTGTTATGCTACTTTGCTATTTGCATAAGCAACATTTTTGAGATATGCAATGTGCAGAAAGTACTTTATGTCCTTTAAGATTTTCAGTGCTTTTTGACTCACTCTTTTTTCTTTTCCTGGCAATCCGTGCAACAAGCAGGTTGACTAAGGAGCATGTGCAGGTGATCCTGGTCAATTTCAGTTTATTTTTAAATGTTTCTGGTGCTGATAATGTCATCCTATTTACTAGGCTGTGTGCAAAGTGGTTGCGAAATCATCTGAAGACGTTAAGCAAAGTATAAGACGAGCACGCCAGAAGGTACACCATTGACCAACACCTTTTTTTACATCTCCTTTTCCCCTTTTTACATCCATAAGCAAGGTTAAAAGCAAAATAAAGGAGCCCTAACAGATGAGATAGTGTAGTAGTTGCACATATATTTTATAAAACTTGCTCGTTGTGACTGACCAGAAAGATGGTTCTAGCCAGCTCAAGCTCATTAAAGGCTGGGAGAGAGTCAGACCCTAGCTATTCATGATTTGAGCTGTATTCTGTGCAGCCCTAAATGTGAGTCGTTTTTTCAAATGCTGCTCTACAGTATACTCTAGACAATTGCATATGGTTACTACTGAAGTCCTGGATGACAACTACTAAACTCTCTTAAGAATTCAGTTAAGTAGTACTCTTGAAATTGAGGGACATGTTGTGCACTTTCTACTTTACGTCTTCTTAACTTCCAAGAGCATAAAAGGTCCAAATCTGTATGGTGATTCATGTAGCTTACCTCATCTTAACTTGTTTTTGATAGAGGTGTAACAATACTAATAGCTGTTGTCGTCGTCTTTGTAGAGCAACTAAATTGATAAGTAATTAAGGAGCCAAAAATCAAATTTCTCTTACTAATTCTAAAAAAAGGGAATCATTATTGATTAGTGATAAGGAGCCAACGAGCTGAAGAAAAGCTTAGGCATGATGGTTGTGTGTCTGCAATATCAAAATGAAGCTGGAGGTATGTTGGACTTGGTTGTTGCTGGGTAACAAAGACCTGACTTTCTGTTTCAGGTATGTTAATGTGATTTGGGTGCGGAGAGCTTGAAAAGTAAATGGCTACTAACTGTAGTGCTTTAGAGGGGTTATTTTTTGTAGTCCTGTAGTTGAATTCTGGTAGTTTCTGGTTGCAACAATGTCTAGGGAAAGGTGCTTTAGAGAATATTCTTGTAAAAAATAAGGTTTAGTGGCCAAACTACAGGAACAAAAGAGAAGGAATATTGGCATTGTGGGAGGTTTTAACATTCTAGTTCCTTTTTAGTTAGAGAAGTTAAGGAGGATAACAAAAATATTATAGAGAGAAAACGTGAGAAATTCCAACTTTGGAGATGCTAAATGAATTATCACTTAGTTCATTAACCTTCAACCTAGTTTGGCCACCAACAAGAGGTTACTGTAGTTTTCAGTATGCTGTCCTCTATTAACAAATTAATGGAGCTCTTCCAGTAGTTTCTTGTTTGGAATTGAGGGAAACATCTTTGTTCAAAAGTTGTGTGTGTTATGCTTATATGATGTCCACGATACTCTCCTCGCATGACTTGGACTGTACTGAAGATGTGGTGAATTACCTTTTTTGTCACCTATCATTTATGAGGTCGAACGTTTATATACCATTTTCTCCATGCAAGACAGCAGCATGACCAGTAGTATTGCTCCTAGATTCATTGGTGAACTCAATCCCCACCTCCAAAATAAACGGAAGTAAAGAATGGGGTAAATAATGTTGAGCTGATAAAAACAGTCATATGCATGTAGATTTTGCTTGGATATAACCGAAGAATTTATGTGAAGTACATATGTCTCCATGTCGATACTACTTTCCTTTTTATCAGGCTTTGGACACGATAAAGAAATCTGTGCCCAAGAAGAAAGACAAAGACAAGTCAGCTTCAGCTTTCTCAGAAGACGATGCAAAAAGACTGGAGAAGGAAGTACGTCATATATATTAACTTGTTTGCTGAATGAAACATTCGCCATGTGCTGTATAATTTATATTCTATTCTCTACTGCCCTCTTTCATTTGGTTGTGTTTGTTCTTTCAGATTGATGACTTGACAAAAAAGTTTATTAAGTCAGCAGAAGATATGTGCAAGTCAAAGGACAGAGAAATAACTAGCAGTTGAAGAAACTAGTTTTAGTTTCATCGGAGGCTCACGCAAAGGTTCAATTTTTTGGCTGAAGCTATAGAGGGAATTATTTACTCTCCAGAATTCTTGTACTCGAAGTCGGAAAAAGATAACAAGACATGTTACAACTTACAAGTGATCATGCTAATACTTGAAAAGAAAGATATTGTATTTCATATAACCTATGCTG-TTGGTTTTTAGCTTTTCATGTTCAGGATCATATATCATTTCATTTTGTGACAAGGGCTGAGATCATGTAACTTTTTTTTATATATAAATCAAACAACTATTTGTTCTCT</genome_strand>
        <mrna_strand>CTCAACTCGACGAGCATTAGCAGCTTACCGCAACATCTATGGTGCATTACGGGCTACCAATTTCACTGCAAATCGTTTGATAGGCTCCACTTTGAGTCCAATTCGCTATGAAACTGTTCCCTGTTCGCTGGAGCAGACCACCAATTTTCTGCTTGAAAGTCGGAGGAGTTTTGCTAAAGGAAGGAAACAAATTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGAGGAGGTAGATGGTGATGATTATGGAAGTGTAACCACAGCTGTAAACGTAGGTCCTAACATTAAAGCTACTGCAGTCTCACAGATGGAGGCAGCAATTGATGCATTATCACGAGAATTGACCAAGCTGCGAACTGGAAGAGCATCGGCTG.....................................................................................GAATGCTTGATCATATCATCGTTGATTCAGGAGGTGTTAAGACACCTCTTTGCAGGATGGCTGTCATTTCAGTGCTAGACCCAAAAACCTTGTCAGTGAATCCTTATGATCCAGAT......................................................................................................................................................................................TCCCTCAAAGAGTTGGAGAAAGCCATTATTTCATCTCCATTGGGGTTAAATCCTCAATCCGACAACCAGAGATTAATTGTACCAATACCTCC................................................................................................................................................................................................................................................................................................................................................................................................................GTTGACTAAGGAGCATGTGCAG....................................................................GCTGTGTGCAAAGTGGTTGCGAAATCATCTGAAGACGTTAAGCAAAGTATAAGACGAGCACGCCAGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGGACACGATAAAGAAATCTGTGCCCAAGAAGAAAGACAAAGACAAGTCAGCTTCAGCTTTCTCAGAAGACGATGCAAAAAGACTGGAGAAGGAA...............................................................................................................ATTGATGACTTGACAAAAAAGTTTATTAAGTCAGCAGAAGATATGTGCAAGTCAAAGGACAGAGAAATAACTAGCAGTTGAAGAAACTAGTTTTAGTTTCATCGGAGGCTCACGCAAAGGTTCAATTTTTTGGCTGAAGCTATAGAGGGAATTATTTACTCTCCAGAATTCTTGTACTCGAAGTCGGAAAAAGATAACAAGACATGTTACAACTTACAAGTGATCATGCTAATACTTGAAAAGAAAGATATTGTATTTCATATAACCTATGCTGNNTGGTTTTTAGCTTTTCATGTTCAGGATCATATATCATTTCATTTTGTGA-AAGGGCTGAGATCATGTAACTTTTTTTTATATATAAATCAAACAACTATTTGTTCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U331274" ref_strand="+" ref_description="SGN-U331274        Tomato 200607 #1 [2 ESTs aligned]">
      <seq>aatatcaaaatgaagctggaggtatgttggacttggttgttgctgggtaacaaagacctgactttctgtttcaggtatgttaatgtgatttgggtgcggagagcttgaaaagtaaatggctactaactgtagtgctttagaggggttattttttgtagtcctgtagttgaattctggtagtttctggttgcaacaatgtctagggaaaggtgctttagagaatattcttgtaaaaaataaggtttagtggccaaactacaggaacaaaagagaaggaatattggcattgtgggaggttttaacattctagttcctttttagttagagaagttaaggaggataacaaaaatattatagagagaaaacgtgagaaattccaactttggagatgctaaatgaattatcacttagttcattaaccttcaacctagtttggccaccaacaagaggttactgtagttttcagtatgctgtcctctattaacaaattaatggagctcttccagtagtttcttgtttggaattganggaaacatctttgttcaaaagttgtgtgtgttatgcttatatgatgtccacgatactctcctcgcatgacttggactgtactgaagatgtggtgaattaccttttttgtcacctatcatttatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0143O06.1" temp_strand="+" temp_description="C11HBa0143O06.1  AC220058.1 htgs_phase:3 submitted_to_sgn_as:gi|170933588|gb|AC220058.1| sequenced_by:ivf-caas upload_account_name:china11 Solanum lycopersicum chromosome 11 clone C11HBa0143O06, complete sequence">
        <position start="116626" stop="117878"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116926" g_stop="117578" g_length="653"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="653" r_length="653" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0143O06.1" gen_strand="+" ref_id="SGN-U331274" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>653</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0143O06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U331274" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116926" e_stop="117578"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATATCAAAATGAAGCTGGAGGTATGTTGGACTTGGTTGTTGCTGGGTAACAAAGACCTGACTTTCTGTTTCAGGTATGTTAATGTGATTTGGGTGCGGAGAGCTTGAAAAGTAAATGGCTACTAACTGTAGTGCTTTAGAGGGGTTATTTTTTGTAGTCCTGTAGTTGAATTCTGGTAGTTTCTGGTTGCAACAATGTCTAGGGAAAGGTGCTTTAGAGAATATTCTTGTAAAAAATAAGGTTTAGTGGCCAAACTACAGGAACAAAAGAGAAGGAATATTGGCATTGTGGGAGGTTTTAACATTCTAGTTCCTTTTTAGTTAGAGAAGTTAAGGAGGATAACAAAAATATTATAGAGAGAAAACGTGAGAAATTCCAACTTTGGAGATGCTAAATGAATTATCACTTAGTTCATTAACCTTCAACCTAGTTTGGCCACCAACAAGAGGTTACTGTAGTTTTCAGTATGCTGTCCTCTATTAACAAATTAATGGAGCTCTTCCAGTAGTTTCTTGTTTGGAATTGAGGGAAACATCTTTGTTCAAAAGTTGTGTGTGTTATGCTTATATGATGTCCACGATACTCTCCTCGCATGACTTGGACTGTACTGAAGATGTGGTGAATTACCTTTTTTGTCACCTATCATTTATGA</genome_strand>
        <mrna_strand>AATATCAAAATGAAGCTGGAGGTATGTTGGACTTGGTTGTTGCTGGGTAACAAAGACCTGACTTTCTGTTTCAGGTATGTTAATGTGATTTGGGTGCGGAGAGCTTGAAAAGTAAATGGCTACTAACTGTAGTGCTTTAGAGGGGTTATTTTTTGTAGTCCTGTAGTTGAATTCTGGTAGTTTCTGGTTGCAACAATGTCTAGGGAAAGGTGCTTTAGAGAATATTCTTGTAAAAAATAAGGTTTAGTGGCCAAACTACAGGAACAAAAGAGAAGGAATATTGGCATTGTGGGAGGTTTTAACATTCTAGTTCCTTTTTAGTTAGAGAAGTTAAGGAGGATAACAAAAATATTATAGAGAGAAAACGTGAGAAATTCCAACTTTGGAGATGCTAAATGAATTATCACTTAGTTCATTAACCTTCAACCTAGTTTGGCCACCAACAAGAGGTTACTGTAGTTTTCAGTATGCTGTCCTCTATTAACAAATTAATGGAGCTCTTCCAGTAGTTTCTTGTTTGGAATTGANGGAAACATCTTTGTTCAAAAGTTGTGTGTGTTATGCTTATATGATGTCCACGATACTCTCCTCGCATGACTTGGACTGTACTGAAGATGTGGTGAATTACCTTTTTTGTCACCTATCATTTATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U316920" ref_strand="+" ref_description="SGN-U316920        Tomato 200607 #1 [18 ESTs aligned] arabidopsis/peptide: AT3G10540.1 | Symbol: None | 3-phosphoinositide-dependent protein kinase, putative, similar to 3-phosphoinositide-dependent protein kinase-1 (Oryza sativa) gi:5001830:gb:AAD37166 | chr3:3289700-3292707 FORWARD | Aliases: F13M14.18 (evalue: 0, score=803) genbank/nr: gi|57168305|gb|AAW38936.1| 3-phosphoinositide-dependent protein kinase-1 [Lycopersicon esculentum] (evalue: 0, score=991)">
      <seq>gtttaatgggttctgggtgttactgctgttgttcaatggtgttgctttcactcctttcatagtttgttgtgaaaaaaatccaatctttttgaagatataggaagaatataagtgtattgattgaaaggggtttgtgggggtgctgaaagattaggtttttttcttgtttgagggtgaaatgttggcattggtagggggagaaggtgatatggagcaagaatttgatgcaaagctaaagattcagaacaattcagctaatactcagagatctaagagctttgcatttagggcaccacaagagaattttacaattcaagattttgaattggggaagatctatggagttggttcttattccaaggttgtcagagcgaaaaagaaagatactgcgaatgtttatgccttgaagatcatggacaagaagttcatcactaaggaaaataagactgcttatgtgaaactagagcgtattgtacttgatcagttagatcatcccggtgttgtccgactatttttcacctttcaagacactttttcactgtacatggcacttgagtcttgtgaaggtggagagctttttgatcaaataacaaggaaaggccgtttgtctgaagatgaggcacgcttttatgcagctgaagttgtagacgctcttgaatatatacatagtatgggattgattcatcgagacattaagccagagaacctgcttcttacttcagatggacatattaaaattgcagactttggcagtgtaaagccaatgcaggatagcagaataacagtccttccaaatgctgcatcagatgacaaagcctgtacttttgtgggaacagccgcttatgtacctcctgaagttttaaattcttctcctgcgacttttggaaatgatctttgggcacttggctgcacattgtatcaaatgctttcaggaacttctccgtttaaagatgccagtgaatggctcatcttccagagaatcattgccagagatattagattcccaaattatttttcaaatgaagccagagatattattgatcagctgctggatgttgatcctagcagaagacctggtgctggacctgatggttatgcttccttgaaaaatcatcctttctttagtgggatcgattgggagaatttgaggttgcagacccctccaaggcttgccatggagccaaaagccccgtcaactcatagcagtggtgatgagcaagatccttcatggaatccatcacacattggagatggttcagttagacctaacgatggaaacggtgctgctgcatcagtttctgaagctggtaacagtatcaccaggctcgcatctatcgactcctttgactcaaaatggaagcaatttttagatcctggtgaatccgtgctcatgatctcgatggtgaaaaagttgcagaaactcacaagcaagaaagttcagctaatcctaacaaataaaccaaagttgatttacgtagatccctcaaagttggtgatcaaagggaacattatatggtccgacaatcctaacgatcttagcattcaagtcacaagcccttcacagttcaagatttgtacaccaaagaaagttatgtcattcgaggatgccaaaaaccgagcacaacagtggaaaaaggcgattgaagctctccagaaccggtgattctggtctttttgttgttttgactacacattctttgcagatcgaacggggttccagaaacagttggatgctcctaaaaagaacttcttatcaaacaccactcaattttacagctttactctctctagtagaaattttcacttatccttggatgaagctcactcctgtttacacaaatcacatttgtatgtttacagacttgtaaagacacaaaagttttattgaaagaacttgatgagctgattttatcagctattttgctaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0143O06.1" temp_strand="-" temp_description="C11HBa0143O06.1  AC220058.1 htgs_phase:3 submitted_to_sgn_as:gi|170933588|gb|AC220058.1| sequenced_by:ivf-caas upload_account_name:china11 Solanum lycopersicum chromosome 11 clone C11HBa0143O06, complete sequence">
        <position start="126947" stop="120882"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126664" g_stop="126304" g_length="361"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="361" r_length="361" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="126303" i_stop="125437" i_length="867">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="125436" g_stop="125256" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="362" r_stop="542" r_length="181" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="125255" i_stop="125149" i_length="107">
            <donor d_prob="0.745" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="125148" g_stop="125096" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="543" r_stop="595" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="125095" i_stop="124644" i_length="452">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.785" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="124643" g_stop="124542" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="596" r_stop="697" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="124541" i_stop="124472" i_length="70">
            <donor d_prob="0.461" d_score="1.00"/>
            <acceptor a_prob="0.685" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="124471" g_stop="124363" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="698" r_stop="806" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="124362" i_stop="124249" i_length="114">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="124248" g_stop="124170" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="807" r_stop="885" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="124169" i_stop="123976" i_length="194">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.801" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="123975" g_stop="123810" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="886" r_stop="1051" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="123809" i_stop="122441" i_length="1369">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.646" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="122440" g_stop="122305" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="1052" r_stop="1186" r_length="135" r_score="0.993"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="122304" i_stop="122212" i_length="93">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.454" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="122211" g_stop="122042" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="1187" r_stop="1356" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="122041" i_stop="121860" i_length="182">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="121859" g_stop="121637" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="1357" r_stop="1579" r_length="223" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="121636" i_stop="121529" i_length="108">
            <donor d_prob="0.310" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="121528" g_stop="121170" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="1580" r_stop="1938" r_length="359" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0143O06.1" gen_strand="-" ref_id="SGN-U316920" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>1939</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0143O06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U316920" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126664" e_stop="126304"/>
          <exon e_start="125436" e_stop="125256"/>
          <exon e_start="125148" e_stop="125096"/>
          <exon e_start="124643" e_stop="124542"/>
          <exon e_start="124471" e_stop="124363"/>
          <exon e_start="124248" e_stop="124170"/>
          <exon e_start="123975" e_stop="123810"/>
          <exon e_start="122440" e_stop="122305"/>
          <exon e_start="122211" e_stop="122042"/>
          <exon e_start="121859" e_stop="121637"/>
          <exon e_start="121528" e_stop="121170"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTAATGGGTTCTTTATGTTACTGCTGTTGTTCAATGGTGTTGCTTTCACTCCTTTCATAGTTTGTTGTGAAAAAAATCCAATCTTTTTGAAGATATAGGAAGAATATAAGTGTATTGATTGAAAGGGGTTTGTGGGGGTGCTGAAAGATTAGGTTTTTTTCTTGTTTGAGGGTGAAATGTTGGCATTGGTAGGGGGAGAAGGTGATATGGAGCAAGAATTTGATGCAAAGCTAAAGATTCAGAACAATTCAGCTAATACTCAGAGATCTAAGAGCTTTGCATTTAGGGCACCACAAGAGAATTTTACAATTCAAGATTTTGAATTGGGGAAGATCTATGGAGTTGGTTCTTATTCCAAGGTCACTTTTTTCCCCCCTTTGTTCCTTATCTTTGTATTTCCATTTTTTAAAAATTTCAACTTGGTAGCATTTCTATATTTGGTTTCTATTGCTTAAAAATTTCTGCTTAACTGTGAAAATTTAAACTTGTTAGCATTTCTATATTCTTCTTGTTGGCCTTTTTGTTTAGTATGGAAGGGCTTGGTCACTGGTTTATCTCTGTTGTCATTTTTTACTGAATTCCACATGTCTTCCCTTTTGATGGTTCTTTAATCTGTGTAAGCAGAAATTTAGTTTACTGTCCACTGATAAATTTTTTTTGAGGGTTTATCTTTGAAGTTTGTCTGAACTTATCTGGTAAGAAGCTGTTCATTTGAAGAGATTTATACTTATAGAAACTATGCTTTATGGCATTAATGATGTAGGGATGTAAAAATATCATTCTTGTTTCATTTGCTTTTGGTGTAAAGAGAAAATTCTCATTTGTGTTGGTAGTTTGTGTGATCTAATAGATGATTTTGGTTGAACCACAATTTTTGTGTAACATATTTTTGGACACTTTCTTGTTGTGTTGTTTATGGAATATATCTGATTTGTCAAAAAGAAGGAGAAGAAGAAGAAATCACACCCCTAGTGTAGTGCTCCATTTCAGGGGTTGTCATAGACAAATGTGTGATTGAGTTTCTGGCTTATTAGTTTGTACTAGTAACTAACAAGAATCTTCTGAGATGTGTTGTATATCCCTTTTCATCTTCTCACTTTTTCATTAGAATAGATTATGGATATAATTAAAGTACATGAACTCAAATTGTGGTGTTAATGCTTAATTATCGACATGTCAAATTAAAGTTTTAGCATTTAAGTTATTTGCCCTCTATGTTTTATCAGGTTGTCAGAGCGAAAAAGAAAGATACTGCGAATGTTTATGCCTTGAAGATCATGGACAAGAAGTTCATCACTAAGGAAAATAAGACTGCTTATGTGAAACTAGAGCGTATTGTACTTGATCAGTTAGATCATCCCGGTGTTGTCCGACTATTTTTCACCTTTCAAGACACTTTTTCACTGTGTGAGTATTTTATTCATTCTTCATTTAGTGTCTTTCCCCCCATTTTGCATGCACTCTTGTTGATCTTTGGTTTGTCTAATTTAATTGTATTTGTCTGTATTATGAAGACATGGCACTTGAGTCTTGTGAAGGTGGAGAGCTTTTTGATCAAATAACAAGGGTAAGTAAATGAAGAACCTTGATGCATGTATTCTTGTTGTTGTTATATGAAGTGTCCAAGTAGAACCCGATGCAATAAGAAAAATGGAAGTTCCTGTCAACCCGTGAACCTTTTGCAGAATATGGATATTGTACTTATTTGAATGAAAGCTAAATGGTTGAGTTCCGTAGGCTGAAATGTAGCCATACTTTGATGTTCTATAAGGTGTCTGTATTATTCTTTCCAACTTCCGAAAAGAATGAACATCTTCTCAAAGGTTCCCTGTGTATTCTGCTTTTTCCAGTCAAAACATTGGTGTTTTTCATGAACTTATTGAAAATGTTCCCGTCCTTTCTTCAAAATATTTCCTTTCTCTAAAGTTTGTGACTACATATATGATGTGCTAATATTCTTGTTTGATTGGCTAGCAAGAGAGGATCATGAACAATGTAGTTTTAACTTTGTGGGTGCAGAAAGGCCGTTTGTCTGAAGATGAGGCACGCTTTTATGCAGCTGAAGTTGTAGACGCTCTTGAATATATACATAGTATGGGATTGATTCATCGAGACATTAAGGTATTTCACAAAGTGGACTGTTACGTGAATAATATATGTGGGGGGATTCTGACAGTTCGCTTATTGGCAGCCAGAGAACCTGCTTCTTACTTCAGATGGACATATTAAAATTGCAGACTTTGGCAGTGTAAAGCCAATGCAGGATAGCAGAATAACAGTCCTTCCAAATGCTGCATCAGGTAAATGTTGCTTTCTACGATGACACTCTCCTTGAAATTGGATTCACATTAACCTGATGAGAGTATATTGTCGTCTTGATCATTATTGAATCATTGGTTGTTCTTTTTATTCAGATGACAAAGCCTGTACTTTTGTGGGAACAGCCGCTTATGTACCTCCTGAAGTTTTAAATTCTTCTCCTGCGACTTTTGGGTATAAAACTCTATCTTTGGAAAAACCATATTTTTCTTCTTCTTTGTGTTTTATTAGGACATATGTTGTAGGTCCATGTCTGCATCATTGCTCCTTTTAAATTTTTACAGCTTGTTCATATTAGCGTCTACATTTCTTTATTATGAATCATATTTGTCTAACATCACTATTCATTTTGGATATGTCTTTACCAGAAATGATCTTTGGGCACTTGGCTGCACATTGTATCAAATGCTTTCAGGAACTTCTCCGTTTAAAGATGCCAGTGAATGGCTCATCTTCCAGAGAATCATTGCCAGAGATATTAGATTCCCAAATTATTTTTCAAATGAAGCCAGAGATATTATTGATCAGCTGCTGGTACGCTATCATTTCGTATTTAATATTCACTTCCATCCTGTGGTTCCTCTTTCTGTTTCCCCTATTATGCTAGCTTTTTTTCTTTTTATGTTTTATACTTTACACTTCTCCATTTGACTGAACTTTCATCTCTAGACAGTGTGGTCTCTACTTTAAACAACACGCCTCCTTGAAGTGAGGTTTGACCAGCTTTGTTTTTGGAATTATAATATTCCTGATCTAAAGTTGTAGCTAATTTTTTCTCAGTCGTGGACCATATCTTTGTCTATTGACCTTTATCTTTTGTGAATGAAACAGGGAATGTCCCTACAATTTTATACGTATTTTATAATCTGCAATCGATACCTATCCTATTATGAATAAAGTAAAAAAAGTGCATGTGAAAAATGTAACTTTCGCTTCTGAAGTAGTATCTTGTTTTGTCTACACTGTACAACATGACCGTCATGCAGTCTAGAGAGTTATATACTATGTAATATCATTACAAAAAATTCTGGGTGTTGAAATACCACCACAATGCTTACATGACAAAGACCTTTCATATTTTTCAACTTCTTACATAGAGAGAATGAATTTTTCTACAGTAGTCTAGCACTATCTTCGAGACTTCGACAACTTAGTTCTTTCTAATAGGATGTAGTATATAGTTTTAAAACATTCAAATTTCAAAATATAAAGCCAGAAGCTTTGTCCTCCATGTGCTGGCTTGCAAGTGCAGTTTTGCTGGTTATAATTTTTCGTTACTTGCAGCTATTAATTATTATCCAGTACTGGAAAAGGACGTTGCTGGTATATTGTGGGACTTTTGTGCTAATGTGAGCAACGTGCTACGTTGTCTTTCACTAGTTCCTATGAAGTTTCAGGTTATAGAACTTTAGGTTGGTGAACGCAAGGGTGTGACCTTGTGATCAATGAAATAGGTTGAGAACCATGAAGTCTTGGATTCAATTCTCAGTTGAGCAAAGACACTACGTGTTTTGTTTCATCTGTCTAAGCTATGGTGGATAGAGTTACCAGGTAACTGTCTTGGCCGGAAGTAGAGGGTGGAATTAGTCTAGGTGCACGCTAGCTGGCCCAAACACTACATTTACTACAACAAACAACAACATACTCAGTGTAATCCTACAATTAGAGTCTGGGGAGGGTGGTGTTACGCAGACCTTAACCCTACTTTGTGAAGGTAAGGTAGATAGGTTGTTTCCGAATAGATGCTTGACTCAAGTAAAGCCATATAAAAGCACGTTTGAGAAGGACATACAGTAATCAATAATCCATGAAAATAATGGAGTATGTATGTTAGTATGTTAGATATATCTTCCTATTAGTGTTATCTGTTCTGCTGATTGACTTGAGCGCAAAAAAAACTCAGGATGTTGATCCTAGCAGAAGACCTGGTGCTGGACCTGATGGTTATGCTTTCCTTGAAAAATCATCCTTTCTTTAGTGGGATCGATTGGGAGAATTTGAGGTTGCAGACCCCTCCAAGGCTTGCCATGGAGCCAAAAGTATGTCATTCATTTTGCTTTATGTTTTAGATCTTACTTGCCCCAACAGATAGTTCTTTTCCCGTTAAACAGTTCTAGTTATGAATCATTCAGGCCCCGTCAACTCATAGCAGTGGTGATGAGCAAGATCCTTCATGGAATCCATCACACATTGGAGATGGTTCAGTTAGACCTAACGATGGAAACGGTGCTGCTGCATCAGTTTCTGAAGCTGGTAACAGTATCACCAGGCTCGCATCTATCGACTCCTTTGACTCAAAATGGTAGGCTCATGAACTTCTGCTGACCTCAATAATGAAAAACACTCCAGTATATCCGGATGCTGTCATATTTGTTAACCTTTTCAATAGAGTTCCATAATTCCATCTGGACCAAATGCTCTTTTTCTATCTTCCCTTTTGATAACTACTATATGTTGACTTTTTTCTTGTGATGGCATCAATAGGAAGCAATTTTTAGATCCTGGTGAATCCGTGCTCATGATCTCGATGGTGAAAAAGTTGCAGAAACTCACAAGCAAGAAAGTTCAGCTAATCCTAACAAATAAACCAAAGTTGATTTACGTAGATCCCTCAAAGTTGGTGATCAAAGGGAACATTATATGGTCCGACAATCCTAACGATCTTAGCATTCAAGTCACAAGCCCTTCACAGTTCAAGATTTGTACAGTTAAGTTCCTTTGCTTTCCCTGCATATAACATTGTTAGTCAAGTTTTTGTTACTTTAGTTTAACTCGTTTCCGCTATCTGTGTGCATTCATCTTGTGATCATTACAGCCAAAGAAAGTTATGTCATTCGAGGATGCCAAAAACCGAGCACAACAGTGGAAAAAGGCGATTGAAGCTCTCCAGAACCGGTGATTCTGGTCTTTTTGTTGTTTTGACTACACATTCTTTGCAGATCGAACGGGGTTCCAGAAACAGTTGGATGCTCCTAAAAAGAACTTCTTATCAAACACCACTCAATTTTACAGCTTTACTCTCTCTAGTAGAAATTTTCACTTATCCTTGGATGAAGCTCACTCCTGTTTACACAAATCACATTTGTATGTTTACAGACTTGTAAAGACACAAAAGTTTTATTGAAAGAACTTGATGAGCTGATTTTATCAGCTATTTTGCTATCTATTATTTCA</genome_strand>
        <mrna_strand>GTTTAATGGGTTCTGGGTGTTACTGCTGTTGTTCAATGGTGTTGCTTTCACTCCTTTCATAGTTTGTTGTGAAAAAAATCCAATCTTTTTGAAGATATAGGAAGAATATAAGTGTATTGATTGAAAGGGGTTTGTGGGGGTGCTGAAAGATTAGGTTTTTTTCTTGTTTGAGGGTGAAATGTTGGCATTGGTAGGGGGAGAAGGTGATATGGAGCAAGAATTTGATGCAAAGCTAAAGATTCAGAACAATTCAGCTAATACTCAGAGATCTAAGAGCTTTGCATTTAGGGCACCACAAGAGAATTTTACAATTCAAGATTTTGAATTGGGGAAGATCTATGGAGTTGGTTCTTATTCCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCAGAGCGAAAAAGAAAGATACTGCGAATGTTTATGCCTTGAAGATCATGGACAAGAAGTTCATCACTAAGGAAAATAAGACTGCTTATGTGAAACTAGAGCGTATTGTACTTGATCAGTTAGATCATCCCGGTGTTGTCCGACTATTTTTCACCTTTCAAGACACTTTTTCACTGT...........................................................................................................ACATGGCACTTGAGTCTTGTGAAGGTGGAGAGCTTTTTGATCAAATAACAAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGCCGTTTGTCTGAAGATGAGGCACGCTTTTATGCAGCTGAAGTTGTAGACGCTCTTGAATATATACATAGTATGGGATTGATTCATCGAGACATTAAG......................................................................CCAGAGAACCTGCTTCTTACTTCAGATGGACATATTAAAATTGCAGACTTTGGCAGTGTAAAGCCAATGCAGGATAGCAGAATAACAGTCCTTCCAAATGCTGCATCAG..................................................................................................................ATGACAAAGCCTGTACTTTTGTGGGAACAGCCGCTTATGTACCTCCTGAAGTTTTAAATTCTTCTCCTGCGACTTTTGG..................................................................................................................................................................................................AAATGATCTTTGGGCACTTGGCTGCACATTGTATCAAATGCTTTCAGGAACTTCTCCGTTTAAAGATGCCAGTGAATGGCTCATCTTCCAGAGAATCATTGCCAGAGATATTAGATTCCCAAATTATTTTTCAAATGAAGCCAGAGATATTATTGATCAGCTGCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTTGATCCTAGCAGAAGACCTGGTGCTGGACCTGATGGTTATGC-TTCCTTGAAAAATCATCCTTTCTTTAGTGGGATCGATTGGGAGAATTTGAGGTTGCAGACCCCTCCAAGGCTTGCCATGGAGCCAAAA.............................................................................................GCCCCGTCAACTCATAGCAGTGGTGATGAGCAAGATCCTTCATGGAATCCATCACACATTGGAGATGGTTCAGTTAGACCTAACGATGGAAACGGTGCTGCTGCATCAGTTTCTGAAGCTGGTAACAGTATCACCAGGCTCGCATCTATCGACTCCTTTGACTCAAAATG......................................................................................................................................................................................GAAGCAATTTTTAGATCCTGGTGAATCCGTGCTCATGATCTCGATGGTGAAAAAGTTGCAGAAACTCACAAGCAAGAAAGTTCAGCTAATCCTAACAAATAAACCAAAGTTGATTTACGTAGATCCCTCAAAGTTGGTGATCAAAGGGAACATTATATGGTCCGACAATCCTAACGATCTTAGCATTCAAGTCACAAGCCCTTCACAGTTCAAGATTTGTACA............................................................................................................CCAAAGAAAGTTATGTCATTCGAGGATGCCAAAAACCGAGCACAACAGTGGAAAAAGGCGATTGAAGCTCTCCAGAACCGGTGATTCTGGTCTTTTTGTTGTTTTGACTACACATTCTTTGCAGATCGAACGGGGTTCCAGAAACAGTTGGATGCTCCTAAAAAGAACTTCTTATCAAACACCACTCAATTTTACAGCTTTACTCTCTCTAGTAGAAATTTTCACTTATCCTTGGATGAAGCTCACTCCTGTTTACACAAATCACATTTGTATGTTTACAGACTTGTAAAGACACAAAAGTTTTATTGAAAGAACTTGATGAGCTGATTTTATCAGCTATTTTGCTAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335889" ref_strand="+" ref_description="SGN-U335889        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT5G04510.2 | Symbol: None | 3-phosphoinositide-dependent protein kinase, putative, similar to 3-phosphoinositide-dependent protein kinase-1 (Oryza sativa) gi:5001830:gb:AAD37166 | chr5:1286938-1289903 FORWARD | Aliases: None (evalue: 5e-14, score=75.1) genbank/nr: gi|57168305|gb|AAW38936.1| 3-phosphoinositide-dependent protein kinase-1 [Lycopersicon esculentum] (evalue: 3e-23, score=112)">
      <seq>aaaaggggagaaagaaacttaaagctctcacctttatacatatttataaaaatatatacataatggtgtctctccttttctaattttagttttagtttttttttttttgcatgtataaggaatcatttgcttttgggtgtctttgacatatggaattgctttatcagaacaaagaaaaagaaagaaagagagaatatataaagaggatatgagctgatgtttaatgggttctttatgttactgctgttgttcaatggtgttgctttcactcctttcatagtttgttgtgaaaaaaatccaatctttttgaagatataggaagaatataagtgtattgattgaaaagggtttgtgggggtgctgaaagaataagtttttttcttgtttgaaggtgaaatgttggcattggtagggggagaaagtgata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0143O06.1" temp_strand="-" temp_description="C11HBa0143O06.1  AC220058.1 htgs_phase:3 submitted_to_sgn_as:gi|170933588|gb|AC220058.1| sequenced_by:ivf-caas upload_account_name:china11 Solanum lycopersicum chromosome 11 clone C11HBa0143O06, complete sequence">
        <position start="127183" stop="126156"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126883" g_stop="126456" g_length="428"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="427" r_length="427" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0143O06.1" gen_strand="-" ref_id="SGN-U335889" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>428</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0143O06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335889" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126883" e_stop="126456"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGGGGAGAAAGAAACTTAAAGCTCTCACCTTTATACATATTTATAAAAATATATACATAATGGTGTCTCTCCTTTTCTAATTTTAGTTTTAGTTTTTTTTTTTTTTGCATGTATAAGGAATCATTTGCTTTTGGGTGTCTTTGACATATGGAATTGCTTTATCAGAACAAAGAAAAAGAAAGAAAGAGAGAATATATAAAGAGGATATGAGCTGATGTTTAATGGGTTCTTTATGTTACTGCTGTTGTTCAATGGTGTTGCTTTCACTCCTTTCATAGTTTGTTGTGAAAAAAATCCAATCTTTTTGAAGATATAGGAAGAATATAAGTGTATTGATTGAAAGGGGTTTGTGGGGGTGCTGAAAGATTAGGTTTTTTTCTTGTTTGAGGGTGAAATGTTGGCATTGGTAGGGGGAGAAGGTGATA</genome_strand>
        <mrna_strand>AAAAGGGGAGAAAGAAACTTAAAGCTCTCACCTTTATACATATTTATAAAAATATATACATAATGGTGTCTCTCCTTTTCTAATTTTAGTTTTAG-TTTTTTTTTTTTTGCATGTATAAGGAATCATTTGCTTTTGGGTGTCTTTGACATATGGAATTGCTTTATCAGAACAAAGAAAAAGAAAGAAAGAGAGAATATATAAAGAGGATATGAGCTGATGTTTAATGGGTTCTTTATGTTACTGCTGTTGTTCAATGGTGTTGCTTTCACTCCTTTCATAGTTTGTTGTGAAAAAAATCCAATCTTTTTGAAGATATAGGAAGAATATAAGTGTATTGATTGAAAAGGGTTTGTGGGGGTGCTGAAAGAATAAGTTTTTTTCTTGTTTGAAGGTGAAATGTTGGCATTGGTAGGGGGAGAAAGTGATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U326970" ref_strand="+" ref_description="SGN-U326970        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: | Symbol: None | a member of the Glycosyltransferase Family 64 (according to CAZy Database) | chr5:1283469-1286360 FORWARD | Aliases: T32M21.100, T32M21_100(evalue: 8e-115, score=410) genbank/nr: putative(evalue: 1e-117, score=426)">
      <seq>taagttggtgccctcacaatgttggaaagaggagtgacgcttcgttcgattgggaaagatcaagcttgttatctaatagaatgaggctattttgtagtcggttgaacagagcaagctcgtctctccgtgccagaataaagcctaaaacatgcagtggaggattggttcttgctgtaatctttatagtcactgtggtgttaatgtgcactggagttaaatacatctatggaggcagcggtgcagaggaagcttacccgttaaatggtcagtactctcagttcactttattaacaatgacctacgatgctcggctctggaacttgaaaatgtatgtcaagcattactcaaggtgttcttcagtacgtgagatcgttgtagtgtggaataaaggccaacctccagaactgagtgagctcgattcagcagtgccagtgaggataagagtagagaaacagatctcactaaacaatcgattcaaagtagatcctttgataaagacacgagcagttcttgaacttgatgatgacattatgatgccttgtgatgatgttgaaaggggatttaaggtatggcgtgagtaccctgaacgcatcgttgggttttacccccggcttgcagatggaaacccattgaaatatagagctgagaatcatgctcgcgagcacaatggatacaacatgattcttacaggagctgccttcatggacagcaaaatggctttcgaaaagtactggagcaatgaagctgcagcaggaagggccgtggtggacaagcttttcaactgtgaagatgtgttgctaaactacttgtatgcaaacgcgagctcctccagtacagttgaatacgtaaaaccagcatgggcaatcgatacttcaaagttttctggcgttgcaattagccggaatacacagactcactatggactcagaagcagttgcctccaaaagttctcagaaatgtatggaagtata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0143O06-8yjbq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0143O06.1" temp_strand="-" temp_description="C11HBa0143O06.1  AC220058.1 htgs_phase:3 submitted_to_sgn_as:gi|170933588|gb|AC220058.1| sequenced_by:ivf-caas upload_account_name:china11 Solanum lycopersicum chromosome 11 clone C11HBa0143O06, complete sequence">
        <position start="132613" stop="131403"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="132613" g_stop="131703" g_length="911"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="971" r_length="911" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0143O06.1" gen_strand="-" ref_id="SGN-U326970" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>911</cumulative_length_of_scored_exons>
        <coverage percentage="0.938" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0143O06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U326970" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="132613" e_stop="131703"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGCTTGTTATCTAATAGAATGAGGCTATTTTGTAGTCGGTTGAACAGAGCAAGCTCGTCTCTCCGTGCCAGAATAAAGCCTAAAACATGCAGTGGAGGATTGGTTCTTGCTGTAATCTTTATAGTCACTGTGGTGTTAATGTGCACTGGAGTTAAATACATCTATGGAGGCAGCGGTGCAGAGGAAGCTTACCCGTTAAATGGTCAGTACTCTCAGTTCACTTTATTAACAATGACCTACGATGCTCGGCTCTGGAACTTGAAAATGTATGTCAAGCATTACTCAAGGTGTTCTTCAGTACGTGAGATCGTTGTAGTGTGGAATAAAGGCCAACCTCCAGAACTGAGTGAGCTCGATTCAGCAGTGCCAGTGAGGATAAGAGTAGAGAAACAGAACTCACTAAACAATCGATTCAAAGTAGATCCTTTGATAAAGACACGAGCAGTTCTTGAACTTGATGATGACATTATGATGCCTTGTGATGATGTTGAAAGGGGATTTAAGGTATGGCGTGAGTACCCTGAACGCATCGTTGGGTTTTACCCCCGGCTTGCAGATGGAAACCCATTGAAATATAGAGCTGAGAATCATGCTCGCGAGCACAATGGATACAACATGATTCTTACAGGAGCTGCCTTCATGGACAGCAAAATGGCTTTCGAAAAGTACTGGAGCAATGAAGCTGCAGCAGGAAGGGCCGTGGTGGACAAGCTTTTCAACTGTGAAGATGTGTTGCTAAACTACTTGTATGCAAACGCGAGCTCCTCCAGTACAGTTGAATACGTAAAACCAGCATGGGCAATCGATACTTCAAAGTTTTCTGGCGTTGCAATTAGCCGGAATACACAGACTCACTATGGACTCAGAAGCAGTTGCCTCCAAAAGTTCTCAGAAATGTATGGAAGTATA</genome_strand>
        <mrna_strand>CAAGCTTGTTATCTAATAGAATGAGGCTATTTTGTAGTCGGTTGAACAGAGCAAGCTCGTCTCTCCGTGCCAGAATAAAGCCTAAAACATGCAGTGGAGGATTGGTTCTTGCTGTAATCTTTATAGTCACTGTGGTGTTAATGTGCACTGGAGTTAAATACATCTATGGAGGCAGCGGTGCAGAGGAAGCTTACCCGTTAAATGGTCAGTACTCTCAGTTCACTTTATTAACAATGACCTACGATGCTCGGCTCTGGAACTTGAAAATGTATGTCAAGCATTACTCAAGGTGTTCTTCAGTACGTGAGATCGTTGTAGTGTGGAATAAAGGCCAACCTCCAGAACTGAGTGAGCTCGATTCAGCAGTGCCAGTGAGGATAAGAGTAGAGAAACAGATCTCACTAAACAATCGATTCAAAGTAGATCCTTTGATAAAGACACGAGCAGTTCTTGAACTTGATGATGACATTATGATGCCTTGTGATGATGTTGAAAGGGGATTTAAGGTATGGCGTGAGTACCCTGAACGCATCGTTGGGTTTTACCCCCGGCTTGCAGATGGAAACCCATTGAAATATAGAGCTGAGAATCATGCTCGCGAGCACAATGGATACAACATGATTCTTACAGGAGCTGCCTTCATGGACAGCAAAATGGCTTTCGAAAAGTACTGGAGCAATGAAGCTGCAGCAGGAAGGGCCGTGGTGGACAAGCTTTTCAACTGTGAAGATGTGTTGCTAAACTACTTGTATGCAAACGCGAGCTCCTCCAGTACAGTTGAATACGTAAAACCAGCATGGGCAATCGATACTTCAAAGTTTTCTGGCGTTGCAATTAGCCGGAATACACAGACTCACTATGGACTCAGAAGCAGTTGCCTCCAAAAGTTCTCAGAAATGTATGGAAGTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>23</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="10155" PGL_stop="4830"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="10155" e_stop="9936"/>
            <exon e_start="9156" e_stop="8677"/>
            <exon e_start="8252" e_stop="8164"/>
            <exon e_start="7833" e_stop="7734"/>
            <exon e_start="6283" e_stop="6056"/>
            <exon e_start="5152" e_stop="4830"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.882" acc_prob="0.951" e_score="1.000"/>
          <exon-intron don_prob="0.927" acc_prob="0.962" e_score="1.000"/>
          <exon-intron don_prob="0.834" acc_prob="0.855" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="10155" e_stop="9936" e_length="220"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.993">
            <gDNA_intron_boundary i_start="9935" i_stop="9157" i_length="779"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="9156" e_stop="8677" e_length="480"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.984">
            <gDNA_intron_boundary i_start="8676" i_stop="8253" i_length="424"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="8252" e_stop="8164" e_length="89"/>
          </exon>
          <intron i_serial="3" don_prob="0.882" acc_prob="0.951">
            <gDNA_intron_boundary i_start="8163" i_stop="7834" i_length="330"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="7833" e_stop="7734" e_length="100"/>
          </exon>
          <intron i_serial="4" don_prob="0.927" acc_prob="0.962">
            <gDNA_intron_boundary i_start="7733" i_stop="6284" i_length="1450"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="6283" e_stop="6056" e_length="228"/>
          </exon>
          <intron i_serial="5" don_prob="0.834" acc_prob="0.855">
            <gDNA_intron_boundary i_start="6055" i_stop="5153" i_length="903"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="5152" e_stop="4830" e_length="323"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10155" stop="9936"/>
              <exon start="9156" stop="8677"/>
              <exon start="8252" stop="8164"/>
              <exon start="7833" stop="7734"/>
              <exon start="6283" stop="6056"/>
              <exon start="5152" stop="4830"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U321365" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAGAGAAAAGCGCCACTACACAAAACTGCAAAAACCGCCTCTTTCACTTGAACAACAGCAGCAGCAGCAGCAGCAGCTATGGGGAAAAGCGATGATTCCATTCAGAGAAGGAAGAATAAGAAGAGTAGAAAGAAGCAAGATGACAAGGTATCTAATCGTATCGCTGGAATCATTGCTGCTAAGAAACGTCGACTCTCCGGCAAACGCCGTATGTGTGAG : GGAATGTGCTATAGTTTACCTACACCTGAGGATCCATTCAATGAGAGGCATGGAAAAGTTGATCCTGTAAAGAAGAAGAAGAAGAAGCAGAACCAGTCGAAAAAGGGCAAGAACCCTATTAAGAAGACCGGTTTACCACAAAATTCTGACAAATTAAAGGAAGAGTTCCACATGCATGCTCCATCTAAGTTCTTAATTCTCTGTTTGAAAAACATTCAGGATGACCTTCAGCAGGATGGAGCCTTCAGTGGTAGAGAGGAAAAGCCTTTCTTCATCCATACATGGGGAATTGAATTCTGGAAATATTTTACCAGTGGCAAAGATATTATTGGTACAAATCAAGCCCATGCTACAACTGAGCAAATTGCTTGGGTTGCAGCAACAACTGCTGATGCCATATCAAGAAAGGAGAAAGAAGGTCTATCAATTAGCAACCCCTACCTTTTATTCCTTGTTCCCTCCCAAGAGAAAGCTGTCAAG : GTGCGGAAAATATGCAAGCCTCTGAAAGCTCTTGGAATACATACAGTGAGTCTGCATCCTGGTGCTTCTATAGACCACCAGATTCAGGG : CCTGAAGAACTGTGAGCCCGAATTTCTTATTTCTACTCCTGAAAGACTTCAAGAACTCCTCTCACATGGTGCCATTAAAACTTCTGATGTTTCTTTCCTG : GTCATCGATGGACCTCTTTCTGAGACAGGTTATGTTGATGCGGTTGAATCCATTGCAAAATCTATTTCTGGAAAGCCACAAATACTGGCTTTCAATGATTGCTCAAATTCTTCATCCAATTTTCTTATGAAGAAGAGTGTTGGAGAATCAATCTGTAGAATACCGCTTGATGATCCAGTAAATGATCATAACATGGCTTGAGATATTTGTGCTTCTAAGTTGTCAATG : ACAAACGCGACATGCTGTCCTTGCAGTTGATTTGCCTTATCATCGTTACAGATCCTCTGGCGTCATTCAACTTAATAGAAGAAAGTTCTGTAATTGTAAACTTCTTCCATATCACCGGTGCAGCTACGTGCTGCTACTTTTCACATTGTCTGCAAAATTCTTTGTTATACAGTAGATGTATTCGAGATATCTTAGATAAAAGGTTCTCAATGTTGTGTTAGGAGAGGAAGTTAATTGTAACCCCATATGGTCTGTTGTGTTCTGGGAATAGCCCAACTGGATAATTGCAGGAGATGCATATAACCCCTTTTTTACTATTTGAA</gDNA_template>
            <first_frame> E  E  K  S  A  T  T  Q  N  C  K  N  R  L  F  H  L  N  N  S  S  S  S  S  S  S  Y  G  E  K  R  *  F  H  S  E  K  E  E  *  E  E  *  K  E  A  R  *  Q  G  I  *  S  Y  R  W  N  H  C  C  *  E  T  S  T  L  R  Q  T  P  Y  V  *   : G  N  V  L  *  F  T  Y  T  *  G  S  I  Q  *  E  A  W  K  S  *  S  C  K  E  E  E  E  E  A  E  P  V  E  K  G  Q  E  P  Y  *  E  D  R  F  T  T  K  F  *  Q  I  K  G  R  V  P  H  A  C  S  I  *  V  L  N  S  L  F  E  K  H  S  G  *  P  S  A  G  W  S  L  Q  W  *  R  G  K  A  F  L  H  P  Y  M  G  N  *  I  L  E  I  F  Y  Q  W  Q  R  Y  Y  W  Y  K  S  S  P  C  Y  N  *  A  N  C  L  G  C  S  N  N  C  *  C  H  I  K  K  G  E  R  R  S  I  N  *  Q  P  L  P  F  I  P  C  S  L  P  R  E  S  C  Q   : G  A  E  N  M  Q  A  S  E  S  S  W  N  T  Y  S  E  S  A  S  W  C  F  Y  R  P  P  D  S  G  :  P  E  E  L  *  A  R  I  S  Y  F  Y  S  *  K  T  S  R  T  P  L  T  W  C  H  *  N  F  *  C  F  F  P   : G  H  R  W  T  S  F  *  D  R  L  C  *  C  G  *  I  H  C  K  I  Y  F  W  K  A  T  N  T  G  F  Q  *  L  L  K  F  F  I  Q  F  S  Y  E  E  E  C  W  R  I  N  L  *  N  T  A  *  *  S  S  K  *  S  *  H  G  L  R  Y  L  C  F  *  V  V  N   : D  K  R  D  M  L  S  L  Q  L  I  C  L  I  I  V  T  D  P  L  A  S  F  N  L  I  E  E  S  S  V  I  V  N  F  F  H  I  T  G  A  A  T  C  C  Y  F  S  H  C  L  Q  N  S  L  L  Y  S  R  C  I  R  D  I  L  D  K  R  F  S  M  L  C  *  E  R  K  L  I  V  T  P  Y  G  L  L  C  S  G  N  S  P  T  G  *  L  Q  E  M  H  I  T  P  F  L  L  F  E </first_frame>
            <second_frame>  K  R  K  A  P  L  H  K  T  A  K  T  A  S  F  T  *  T  T  A  A  A  A  A  A  A  M  G  K  S  D  D  S  I  Q  R  R  K  N  K  K  S  R  K  K  Q  D  D  K  V  S  N  R  I  A  G  I  I  A  A  K  K  R  R  L  S  G  K  R  R  M  C  E  :  G  M  C  Y  S  L  P  T  P  E  D  P  F  N  E  R  H  G  K  V  D  P  V  K  K  K  K  K  K  Q  N  Q  S  K  K  G  K  N  P  I  K  K  T  G  L  P  Q  N  S  D  K  L  K  E  E  F  H  M  H  A  P  S  K  F  L  I  L  C  L  K  N  I  Q  D  D  L  Q  Q  D  G  A  F  S  G  R  E  E  K  P  F  F  I  H  T  W  G  I  E  F  W  K  Y  F  T  S  G  K  D  I  I  G  T  N  Q  A  H  A  T  T  E  Q  I  A  W  V  A  A  T  T  A  D  A  I  S  R  K  E  K  E  G  L  S  I  S  N  P  Y  L  L  F  L  V  P  S  Q  E  K  A  V  K  :  V  R  K  I  C  K  P  L  K  A  L  G  I  H  T  V  S  L  H  P  G  A  S  I  D  H  Q  I  Q  G :   L  K  N  C  E  P  E  F  L  I  S  T  P  E  R  L  Q  E  L  L  S  H  G  A  I  K  T  S  D  V  S  F  L  :  V  I  D  G  P  L  S  E  T  G  Y  V  D  A  V  E  S  I  A  K  S  I  S  G  K  P  Q  I  L  A  F  N  D  C  S  N  S  S  S  N  F  L  M  K  K  S  V  G  E  S  I  C  R  I  P  L  D  D  P  V  N  D  H  N  M  A  *  D  I  C  A  S  K  L  S  M  :  T  N  A  T  C  C  P  C  S  *  F  A  L  S  S  L  Q  I  L  W  R  H  S  T  *  *  K  K  V  L  *  L  *  T  S  S  I  S  P  V  Q  L  R  A  A  T  F  H  I  V  C  K  I  L  C  Y  T  V  D  V  F  E  I  S  *  I  K  G  S  Q  C  C  V  R  R  G  S  *  L  *  P  H  M  V  C  C  V  L  G  I  A  Q  L  D  N  C  R  R  C  I  *  P  L  F  Y  Y  L   </second_frame>
            <third_frame>   R  E  K  R  H  Y  T  K  L  Q  K  P  P  L  S  L  E  Q  Q  Q  Q  Q  Q  Q  Q  L  W  G  K  A  M  I  P  F  R  E  G  R  I  R  R  V  E  R  S  K  M  T  R  Y  L  I  V  S  L  E  S  L  L  L  R  N  V  D  S  P  A  N  A  V  C  V  R :   E  C  A  I  V  Y  L  H  L  R  I  H  S  M  R  G  M  E  K  L  I  L  *  R  R  R  R  R  S  R  T  S  R  K  R  A  R  T  L  L  R  R  P  V  Y  H  K  I  L  T  N  *  R  K  S  S  T  C  M  L  H  L  S  S  *  F  S  V  *  K  T  F  R  M  T  F  S  R  M  E  P  S  V  V  E  R  K  S  L  S  S  S  I  H  G  E  L  N  S  G  N  I  L  P  V  A  K  I  L  L  V  Q  I  K  P  M  L  Q  L  S  K  L  L  G  L  Q  Q  Q  L  L  M  P  Y  Q  E  R  R  K  K  V  Y  Q  L  A  T  P  T  F  Y  S  L  F  P  P  K  R  K  L  S  R :   C  G  K  Y  A  S  L  *  K  L  L  E  Y  I  Q  *  V  C  I  L  V  L  L  *  T  T  R  F  R   : A  *  R  T  V  S  P  N  F  L  F  L  L  L  K  D  F  K  N  S  S  H  M  V  P  L  K  L  L  M  F  L  S  W :   S  S  M  D  L  F  L  R  Q  V  M  L  M  R  L  N  P  L  Q  N  L  F  L  E  S  H  K  Y  W  L  S  M  I  A  Q  I  L  H  P  I  F  L  *  R  R  V  L  E  N  Q  S  V  E  Y  R  L  M  I  Q  *  M  I  I  T  W  L  E  I  F  V  L  L  S  C  Q  * :   Q  T  R  H  A  V  L  A  V  D  L  P  Y  H  R  Y  R  S  S  G  V  I  Q  L  N  R  R  K  F  C  N  C  K  L  L  P  Y  H  R  C  S  Y  V  L  L  L  F  T  L  S  A  K  F  F  V  I  Q  *  M  Y  S  R  Y  L  R  *  K  V  L  N  V  V  L  G  E  E  V  N  C  N  P  I  W  S  V  V  F  W  E  *  P  N  W  I  I  A  G  D  A  Y  N  P  F  F  T  I  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0143O06.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10103" stop="9936"/>
                    <exon start="9156" stop="8677"/>
                    <exon start="8252" stop="8164"/>
                    <exon start="7833" stop="7734"/>
                    <exon start="6283" stop="6083"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1035</number_coding_nucleotides>
                  <number_encoded_amino_acids>345</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TTAAAAAAAMGKSDDSIQRRKNKKSRKKQDDKVSNRIAGIIAAKKRRLSGKRRMCEGMCYSLPTPEDPFNERHGKVDPVKKKKKKQNQSKKGKNPIKKTGLPQNSDKLKEEFHMHAPSKFLILCLKNIQDDLQQDGAFSGREEKPFFIHTWGIEFWKYFTSGKDIIGTNQAHATTEQIAWVAATTADAISRKEKEGLSISNPYLLFLVPSQEKAVKVRKICKPLKALGIHTVSLHPGASIDHQIQGLKNCEPEFLISTPERLQELLSHGAIKTSDVSFLVIDGPLSETGYVDAVESIAKSISGKPQILAFNDCSNSSSNFLMKKSVGESICRIPLDDPVNDHNMA*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0143O06.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="6065" stop="6056"/>
                    <exon start="5152" stop="4932"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VVNDKRDMLSLQLICLIIVTDPLASFNLIEESSVIVNFFHITGAATCCYFSHCLQNSLLYSRCIRDILDKRFSMLC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="26777" PGL_stop="27370"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="26777" e_stop="27370"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="26777" e_stop="27370" e_length="594"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26777" stop="27370"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U340588" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TATGCTCAGTCATCTGTTCACCCATCTGAAAGTAGTCTCTCTAGATTTTCTTCGGAACCAGTAGAAAGCATCCTTGCGAAATCTGGACCAATTTCGAGCACTAGGAACATTCACAGTTCTTATTCCGGTCCCTTGAAAAGTTCAACATCAACAGCAAGCCCGATTCCTGGAAGGCATTCTTCTGCTGGTTTCTATTCGGGTCCTCTGGGGAGGTCAACAACAAAATCTGGTCCTCTCCCTCTATTTAATAAATCCGGCATGAAGTGGTGGAAATCCCGTGATCGTTCAGGTAACCTAAATGGAAAAGGCTCAAATTTAAAACATGCTCGACCGACCTCTGGACCGCTTAAAGGCTGCATGATGGTTGGGAATGGTTCTCCTGTAAGTAATTGCCATCTAGATCCACACGGATTTCATTCAGGTTTTCTAAATGCAACGAAAGGAGCTGGTGTAGATGGACTTGCTGATGGCTATTCAACTTGCTCTTATCTAACAAGTTATAATGCGAAAAAAAGGCTGTTAAATGCTCCTCCAGAAACTCTCGGGGCTGCTGCCTTAGCACTGCATTATGCAAATGTCATTATCGTGACTGAG</gDNA_template>
            <first_frame> Y  A  Q  S  S  V  H  P  S  E  S  S  L  S  R  F  S  S  E  P  V  E  S  I  L  A  K  S  G  P  I  S  S  T  R  N  I  H  S  S  Y  S  G  P  L  K  S  S  T  S  T  A  S  P  I  P  G  R  H  S  S  A  G  F  Y  S  G  P  L  G  R  S  T  T  K  S  G  P  L  P  L  F  N  K  S  G  M  K  W  W  K  S  R  D  R  S  G  N  L  N  G  K  G  S  N  L  K  H  A  R  P  T  S  G  P  L  K  G  C  M  M  V  G  N  G  S  P  V  S  N  C  H  L  D  P  H  G  F  H  S  G  F  L  N  A  T  K  G  A  G  V  D  G  L  A  D  G  Y  S  T  C  S  Y  L  T  S  Y  N  A  K  K  R  L  L  N  A  P  P  E  T  L  G  A  A  A  L  A  L  H  Y  A  N  V  I  I  V  T  E </first_frame>
            <second_frame>  M  L  S  H  L  F  T  H  L  K  V  V  S  L  D  F  L  R  N  Q  *  K  A  S  L  R  N  L  D  Q  F  R  A  L  G  T  F  T  V  L  I  P  V  P  *  K  V  Q  H  Q  Q  Q  A  R  F  L  E  G  I  L  L  L  V  S  I  R  V  L  W  G  G  Q  Q  Q  N  L  V  L  S  L  Y  L  I  N  P  A  *  S  G  G  N  P  V  I  V  Q  V  T  *  M  E  K  A  Q  I  *  N  M  L  D  R  P  L  D  R  L  K  A  A  *  W  L  G  M  V  L  L  *  V  I  A  I  *  I  H  T  D  F  I  Q  V  F  *  M  Q  R  K  E  L  V  *  M  D  L  L  M  A  I  Q  L  A  L  I  *  Q  V  I  M  R  K  K  G  C  *  M  L  L  Q  K  L  S  G  L  L  P  *  H  C  I  M  Q  M  S  L  S  *  L   </second_frame>
            <third_frame>   C  S  V  I  C  S  P  I  *  K  *  S  L  *  I  F  F  G  T  S  R  K  H  P  C  E  I  W  T  N  F  E  H  *  E  H  S  Q  F  L  F  R  S  L  E  K  F  N  I  N  S  K  P  D  S  W  K  A  F  F  C  W  F  L  F  G  S  S  G  E  V  N  N  K  I  W  S  S  P  S  I  *  *  I  R  H  E  V  V  E  I  P  *  S  F  R  *  P  K  W  K  R  L  K  F  K  T  C  S  T  D  L  W  T  A  *  R  L  H  D  G  W  E  W  F  S  C  K  *  L  P  S  R  S  T  R  I  S  F  R  F  S  K  C  N  E  R  S  W  C  R  W  T  C  *  W  L  F  N  L  L  L  S  N  K  L  *  C  E  K  K  A  V  K  C  S  S  R  N  S  R  G  C  C  L  S  T  A  L  C  K  C  H  Y  R  D  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0143O06.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26777" stop="27370"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>594</number_coding_nucleotides>
                  <number_encoded_amino_acids>198</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YAQSSVHPSESSLSRFSSEPVESILAKSGPISSTRNIHSSYSGPLKSSTSTASPIPGRHSSAGFYSGPLGRSTTKSGPLPLFNKSGMKWWKSRDRSGNLNGKGSNLKHARPTSGPLKGCMMVGNGSPVSNCHLDPHGFHSGFLNATKGAGVDGLADGYSTCSYLTSYNAKKRLLNAPPETLGAAALALHYANVIIVTE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="39009" PGL_stop="47278"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="39009" e_stop="39169"/>
            <exon e_start="39323" e_stop="39391"/>
            <exon e_start="41137" e_stop="41211"/>
            <exon e_start="42052" e_stop="42123"/>
            <exon e_start="42414" e_stop="42483"/>
            <exon e_start="42576" e_stop="42625"/>
            <exon e_start="47085" e_stop="47278"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.995" e_score="0.988"/>
          <exon-intron don_prob="0.995" acc_prob="0.958" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.705" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.953" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="39009" e_stop="39169" e_length="161"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.995">
            <gDNA_intron_boundary i_start="39170" i_stop="39322" i_length="153"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="39323" e_stop="39391" e_length="69"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.958">
            <gDNA_intron_boundary i_start="39392" i_stop="41136" i_length="1745"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="41137" e_stop="41211" e_length="75"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.997">
            <gDNA_intron_boundary i_start="41212" i_stop="42051" i_length="840"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="42052" e_stop="42123" e_length="72"/>
          </exon>
          <intron i_serial="4" don_prob="0.705" acc_prob="0.981">
            <gDNA_intron_boundary i_start="42124" i_stop="42413" i_length="290"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="42414" e_stop="42483" e_length="70"/>
          </exon>
          <intron i_serial="5" don_prob="0.953" acc_prob="1.000">
            <gDNA_intron_boundary i_start="42484" i_stop="42575" i_length="92"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="42576" e_stop="42625" e_length="50"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.000">
            <gDNA_intron_boundary i_start="42626" i_stop="47084" i_length="4459"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="47085" e_stop="47278" e_length="194"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39009" stop="39169"/>
              <exon start="39323" stop="39391"/>
              <exon start="41137" stop="41211"/>
              <exon start="42052" stop="42123"/>
              <exon start="42414" stop="42483"/>
              <exon start="42576" stop="42625"/>
              <exon start="47085" stop="47278"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U332351" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTCACAACCACCACCACCGTTCTCGAGTCGCCGCCACCGCCATGTATCGGAGTCGGTCGGCGCGATCCTCATCACTCAGGGAGCCGGAGAGTCGACTCTCTGAGTCCGACAAAATTGAAGGTGCCGGTAGCTGGGATGCCCTTGAATGGACCAAAATCGAT : CCTGTTGCGAGGTCGATTCCTATTGGAGTTAAACAGTTTTTGTTGGAAGCCGAGCAAGTTATAGTAGAG : GGTTATGGGGTAGTTCTTGTCAACACTGATGATGCTGGAACCTTATACGTGACTAATTTTCGCCTCCTATTCTTG : AGTGAAGGGTCTAGAGATATCATCACAATTGGCACAATACCGTTGGCAACCATTGAAAAGTTCCAGAAAATT : GCTGTGAAGCTTCCATCAGGTCCACGTCAACCTGAAAAGACTAGATCACAGCGATTGCTTCAGATCATCG : GCAAAGATATGAGAATCATCGTGTTTGGTTTTCGTGCTCGAACCAAGCAG : AGGCGTGCTGTCTATGATGCATTATTACGGTGTACAAGGCCTGCAACTTTATGGGATCTCTATGCATTTGCTGGTGGTCCATCCAGGTTTAGCAACACAAATCCCAAAGTAAGGCTGTTGAATGAGTATTGCCGACTTCTTGGAATGGGGTTTTATCAAGCTTCTATCCGTGCTATTGAAGATGGGGCATTTAC</gDNA_template>
            <first_frame> F  T  T  T  T  T  V  L  E  S  P  P  P  P  C  I  G  V  G  R  R  D  P  H  H  S  G  S  R  R  V  D  S  L  S  P  T  K  L  K  V  P  V  A  G  M  P  L  N  G  P  K  S  I :   L  L  R  G  R  F  L  L  E  L  N  S  F  C  W  K  P  S  K  L  *  *  R :   V  M  G  *  F  L  S  T  L  M  M  L  E  P  Y  T  *  L  I  F  A  S  Y  S  * :   V  K  G  L  E  I  S  S  Q  L  A  Q  Y  R  W  Q  P  L  K  S  S  R  K  L :   L  *  S  F  H  Q  V  H  V  N  L  K  R  L  D  H  S  D  C  F  R  S  S  :  A  K  I  *  E  S  S  C  L  V  F  V  L  E  P  S  R :   G  V  L  S  M  M  H  Y  Y  G  V  Q  G  L  Q  L  Y  G  I  S  M  H  L  L  V  V  H  P  G  L  A  T  Q  I  P  K  *  G  C  *  M  S  I  A  D  F  L  E  W  G  F  I  K  L  L  S  V  L  L  K  M  G  H  L  </first_frame>
            <second_frame>  S  Q  P  P  P  P  F  S  S  R  R  H  R  H  V  S  E  S  V  G  A  I  L  I  T  Q  G  A  G  E  S  T  L  *  V  R  Q  N  *  R  C  R  *  L  G  C  P  *  M  D  Q  N  R   : S  C  C  E  V  D  S  Y  W  S  *  T  V  F  V  G  S  R  A  S  Y  S  R   : G  L  W  G  S  S  C  Q  H  *  *  C  W  N  L  I  R  D  *  F  S  P  P  I  L   : E  *  R  V  *  R  Y  H  H  N  W  H  N  T  V  G  N  H  *  K  V  P  E  N   : C  C  E  A  S  I  R  S  T  S  T  *  K  D  *  I  T  A  I  A  S  D  H  R :   Q  R  Y  E  N  H  R  V  W  F  S  C  S  N  Q  A   : E  A  C  C  L  *  C  I  I  T  V  Y  K  A  C  N  F  M  G  S  L  C  I  C  W  W  S  I  Q  V  *  Q  H  K  S  Q  S  K  A  V  E  *  V  L  P  T  S  W  N  G  V  L  S  S  F  Y  P  C  Y  *  R  W  G  I  Y </second_frame>
            <third_frame>   H  N  H  H  H  R  S  R  V  A  A  T  A  M  Y  R  S  R  S  A  R  S  S  S  L  R  E  P  E  S  R  L  S  E  S  D  K  I  E  G  A  G  S  W  D  A  L  E  W  T  K  I  D  :  P  V  A  R  S  I  P  I  G  V  K  Q  F  L  L  E  A  E  Q  V  I  V  E  :  G  Y  G  V  V  L  V  N  T  D  D  A  G  T  L  Y  V  T  N  F  R  L  L  F  L  :  S  E  G  S  R  D  I  I  T  I  G  T  I  P  L  A  T  I  E  K  F  Q  K  I  :  A  V  K  L  P  S  G  P  R  Q  P  E  K  T  R  S  Q  R  L  L  Q  I  I   : G  K  D  M  R  I  I  V  F  G  F  R  A  R  T  K  Q  :  R  R  A  V  Y  D  A  L  L  R  C  T  R  P  A  T  L  W  D  L  Y  A  F  A  G  G  P  S  R  F  S  N  T  N  P  K  V  R  L  L  N  E  Y  C  R  L  L  G  M  G  F  Y  Q  A  S  I  R  A  I  E  D  G  A  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0143O06.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="39011" stop="39169"/>
                    <exon start="39323" stop="39391"/>
                    <exon start="41137" stop="41211"/>
                    <exon start="42052" stop="42123"/>
                    <exon start="42414" stop="42483"/>
                    <exon start="42576" stop="42625"/>
                    <exon start="47085" stop="47276"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>687</number_coding_nucleotides>
                  <number_encoded_amino_acids>229</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HNHHHRSRVAATAMYRSRSARSSSLREPESRLSESDKIEGAGSWDALEWTKIDPVARSIPIGVKQFLLEAEQVIVEGYGVVLVNTDDAGTLYVTNFRLLFLSEGSRDIITIGTIPLATIEKFQKIAVKLPSGPRQPEKTRSQRLLQIIGKDMRIIVFGFRARTKQRRAVYDALLRCTRPATLWDLYAFAGGPSRFSNTNPKVRLLNEYCRLLGMGFYQASIRAIEDGAF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="49218" PGL_stop="49733"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="49218" e_stop="49733"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="49218" e_stop="49733" e_length="516"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49218" stop="49733"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U344918" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTCTAAATGGAGAACATTAGTCCCTTCTATTCATGTTTCTGTTGATTCCTCTTTGGATATTTTATCAGTAATATTCTTATTAGTTGGGACTACGTTTTAGTCATGGTACTACGTTAACTTTAGGTTTTATGTTTTCTAAGAGCCTCTTAGTCCTATTTAGCAGAGACCTCCCCCAGGTTTTTGCTCCATCACACTGACGTCCCTTGTGATATACAATACTACACTTATTTGTTTTAATTTCTCTATAACATTTCTTTTAACTTATATATTATTAATTTATAAAAATTGTGATATGACTAACTTGCCATTTGTAATATATGCTGTTTTGCTTAATTAATATTATAAATGTACTTCTGTGAAATAAAAAGCAATACACTAGCTCTCTTGCAATGGCATTGATGATCTCATAAGAGCTATAGAAATAGGGAGCTGCTGATCACTCGTTCATAGGTTAATCAAGGGTTAAGTTGGTTGTTTTATAGCAGAACTTTTTATGTGATTATCATGTATAATATG</gDNA_template>
            <first_frame> V  *  M  E  N  I  S  P  F  Y  S  C  F  C  *  F  L  F  G  Y  F  I  S  N  I  L  I  S  W  D  Y  V  L  V  M  V  L  R  *  L  *  V  L  C  F  L  R  A  S  *  S  Y  L  A  E  T  S  P  R  F  L  L  H  H  T  D  V  P  C  D  I  Q  Y  Y  T  Y  L  F  *  F  L  Y  N  I  S  F  N  L  Y  I  I  N  L  *  K  L  *  Y  D  *  L  A  I  C  N  I  C  C  F  A  *  L  I  L  *  M  Y  F  C  E  I  K  S  N  T  L  A  L  L  Q  W  H  *  *  S  H  K  S  Y  R  N  R  E  L  L  I  T  R  S  *  V  N  Q  G  L  S  W  L  F  Y  S  R  T  F  Y  V  I  I  M  Y  N  M </first_frame>
            <second_frame>  S  K  W  R  T  L  V  P  S  I  H  V  S  V  D  S  S  L  D  I  L  S  V  I  F  L  L  V  G  T  T  F  *  S  W  Y  Y  V  N  F  R  F  Y  V  F  *  E  P  L  S  P  I  *  Q  R  P  P  P  G  F  C  S  I  T  L  T  S  L  V  I  Y  N  T  T  L  I  C  F  N  F  S  I  T  F  L  L  T  Y  I  L  L  I  Y  K  N  C  D  M  T  N  L  P  F  V  I  Y  A  V  L  L  N  *  Y  Y  K  C  T  S  V  K  *  K  A  I  H  *  L  S  C  N  G  I  D  D  L  I  R  A  I  E  I  G  S  C  *  S  L  V  H  R  L  I  K  G  *  V  G  C  F  I  A  E  L  F  M  *  L  S  C  I  I   </second_frame>
            <third_frame>   L  N  G  E  H  *  S  L  L  F  M  F  L  L  I  P  L  W  I  F  Y  Q  *  Y  S  Y  *  L  G  L  R  F  S  H  G  T  T  L  T  L  G  F  M  F  S  K  S  L  L  V  L  F  S  R  D  L  P  Q  V  F  A  P  S  H  *  R  P  L  *  Y  T  I  L  H  L  F  V  L  I  S  L  *  H  F  F  *  L  I  Y  Y  *  F  I  K  I  V  I  *  L  T  C  H  L  *  Y  M  L  F  C  L  I  N  I  I  N  V  L  L  *  N  K  K  Q  Y  T  S  S  L  A  M  A  L  M  I  S  *  E  L  *  K  *  G  A  A  D  H  S  F  I  G  *  S  R  V  K  L  V  V  L  *  Q  N  F  L  C  D  Y  H  V  *  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C11HBa0143O06.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="51648" PGL_stop="53919"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="51648" e_stop="51703"/>
            <exon e_start="52296" e_stop="52575"/>
            <exon e_start="53070" e_stop="53919"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.986" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.871" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="51648" e_stop="51703" e_length="56"/>
          </exon>
          <intron i_serial="1" don_prob="0.986" acc_prob="0.991">
            <gDNA_intron_boundary i_start="51704" i_stop="52295" i_length="592"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="52296" e_stop="52575" e_length="280"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.871">
            <gDNA_intron_boundary i_start="52576" i_stop="53069" i_length="494"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="53070" e_stop="53919" e_length="850"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51648" stop="51703"/>
              <exon start="52296" stop="52575"/>
              <exon start="53070" stop="53919"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U323108" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTAGATCTTCTGGATTGCATGCTTTCTTGTCGTTTTGGGAACTTTTTGTGCAACAG : CGAGAAGGAAAGAGAGCAAGCTGGTATATATGATGCTTGTGGATGCCTGTGGATGTATTTAGCTGGACTAAGGACATCTGAAGGAAGCTCTCATGCGCATTACAACCTATTCTATGACCCACTGAAACATAATGGTCCTATACTTCCACCAGCAGCAGCTTTAGCTCCAACTGTGTGGCCTCAGTTTCACCTTCGTTGGGCTTGCCCCTCAGAGGCGCAAGGTGGGGAAGTTGAAGCTGAATGCAGGAAGCTGACGAGAAAATTCTCTGAGCTGCAAAGG : GCCAAAGAACTAGCAGAAACAAGACTTAACGAAGCAAGTGTCTCCGTGGAGTCCTTAGTTACAGAACTGAGAAATGAGAAACTTGCAAGCACCTCTGCCAGGGATGCGGTAAAAAGAGCAAGCAAAGAAACTGCTACTATAAAGCGTGCAGTACAATCTTTGGGGTTCAATGTCTACTTTACAGCAGATGGAGACTGTAATGTAGGCATTGAAAGGAACCCAACCGAAATCCCTCAGCGATCTATCTGCTCAGTTTTTACAAAAGATATTAATGGCACAGTGTCCCACAGTGAGAAAGCAGACCTCTCTGAACCTGTTTCTGTGGCAGAAGATAATGTTTCCGACAATCCTCTCATCCGAGTTTGTGGATCTCTATGCCCGAAGCACACTAGAGATGGAGAGTGTCAGTTGCCAAATGCTGGTTGTGCTCAGTTTCAGAGCCAATTGGTTGATTTCAAAGCCAACTTTGATGCATTTGATCGGCTTTCGATATATGATAGTTATTTCGGAAGTTAAGAAAGATGGTTTCAGCTAAGCATCAAGCTCAGTTTATGTGATCAGATATCTTTGTACAGTTGGGAATTAAATGGAGGCGGCAGTAGGTTCAGTTTCTATTATTAGCAAAAATCACAGCAAACAATTAGACAGAAGTAGCAGTAGTGAGTACAACCAGCTTTGAAACATAGTTTCTGTTAGATTGAGATGGCTCAAGAACTGTACATGGAGAACTGATTTGAGTTTCTATGCGGATCATCTGAAAGTTTTGACATCGCGGAGGATTGAGAAGATTTGAACTGATATTATTTAGATACAATTCATATGTACATTTTGACATAGGCGTTCCTCCTCC</gDNA_template>
            <first_frame> V  D  L  L  D  C  M  L  S  C  R  F  G  N  F  L  C  N  S :   E  K  E  R  E  Q  A  G  I  Y  D  A  C  G  C  L  W  M  Y  L  A  G  L  R  T  S  E  G  S  S  H  A  H  Y  N  L  F  Y  D  P  L  K  H  N  G  P  I  L  P  P  A  A  A  L  A  P  T  V  W  P  Q  F  H  L  R  W  A  C  P  S  E  A  Q  G  G  E  V  E  A  E  C  R  K  L  T  R  K  F  S  E  L  Q  R  :  A  K  E  L  A  E  T  R  L  N  E  A  S  V  S  V  E  S  L  V  T  E  L  R  N  E  K  L  A  S  T  S  A  R  D  A  V  K  R  A  S  K  E  T  A  T  I  K  R  A  V  Q  S  L  G  F  N  V  Y  F  T  A  D  G  D  C  N  V  G  I  E  R  N  P  T  E  I  P  Q  R  S  I  C  S  V  F  T  K  D  I  N  G  T  V  S  H  S  E  K  A  D  L  S  E  P  V  S  V  A  E  D  N  V  S  D  N  P  L  I  R  V  C  G  S  L  C  P  K  H  T  R  D  G  E  C  Q  L  P  N  A  G  C  A  Q  F  Q  S  Q  L  V  D  F  K  A  N  F  D  A  F  D  R  L  S  I  Y  D  S  Y  F  G  S  *  E  R  W  F  Q  L  S  I  K  L  S  L  C  D  Q  I  S  L  Y  S  W  E  L  N  G  G  G  S  R  F  S  F  Y  Y  *  Q  K  S  Q  Q  T  I  R  Q  K  *  Q  *  *  V  Q  P  A  L  K  H  S  F  C  *  I  E  M  A  Q  E  L  Y  M  E  N  *  F  E  F  L  C  G  S  S  E  S  F  D  I  A  E  D  *  E  D  L  N  *  Y  Y  L  D  T  I  H  M  Y  I  L  T  *  A  F  L  L  </first_frame>
            <second_frame>  *  I  F  W  I  A  C  F  L  V  V  L  G  T  F  C  A  T   : A  R  R  K  E  S  K  L  V  Y  M  M  L  V  D  A  C  G  C  I  *  L  D  *  G  H  L  K  E  A  L  M  R  I  T  T  Y  S  M  T  H  *  N  I  M  V  L  Y  F  H  Q  Q  Q  L  *  L  Q  L  C  G  L  S  F  T  F  V  G  L  A  P  Q  R  R  K  V  G  K  L  K  L  N  A  G  S  *  R  E  N  S  L  S  C  K  G :   P  K  N  *  Q  K  Q  D  L  T  K  Q  V  S  P  W  S  P  *  L  Q  N  *  E  M  R  N  L  Q  A  P  L  P  G  M  R  *  K  E  Q  A  K  K  L  L  L  *  S  V  Q  Y  N  L  W  G  S  M  S  T  L  Q  Q  M  E  T  V  M  *  A  L  K  G  T  Q  P  K  S  L  S  D  L  S  A  Q  F  L  Q  K  I  L  M  A  Q  C  P  T  V  R  K  Q  T  S  L  N  L  F  L  W  Q  K  I  M  F  P  T  I  L  S  S  E  F  V  D  L  Y  A  R  S  T  L  E  M  E  S  V  S  C  Q  M  L  V  V  L  S  F  R  A  N  W  L  I  S  K  P  T  L  M  H  L  I  G  F  R  Y  M  I  V  I  S  E  V  K  K  D  G  F  S  *  A  S  S  S  V  Y  V  I  R  Y  L  C  T  V  G  N  *  M  E  A  A  V  G  S  V  S  I  I  S  K  N  H  S  K  Q  L  D  R  S  S  S  S  E  Y  N  Q  L  *  N  I  V  S  V  R  L  R  W  L  K  N  C  T  W  R  T  D  L  S  F  Y  A  D  H  L  K  V  L  T  S  R  R  I  E  K  I  *  T  D  I  I  *  I  Q  F  I  C  T  F  *  H  R  R  S  S  S </second_frame>
            <third_frame>   R  S  S  G  L  H  A  F  L  S  F  W  E  L  F  V  Q  Q  :  R  E  G  K  R  A  S  W  Y  I  *  C  L  W  M  P  V  D  V  F  S  W  T  K  D  I  *  R  K  L  S  C  A  L  Q  P  I  L  *  P  T  E  T  *  W  S  Y  T  S  T  S  S  S  F  S  S  N  C  V  A  S  V  S  P  S  L  G  L  P  L  R  G  A  R  W  G  S  *  S  *  M  Q  E  A  D  E  K  I  L  *  A  A  K   : G  Q  R  T  S  R  N  K  T  *  R  S  K  C  L  R  G  V  L  S  Y  R  T  E  K  *  E  T  C  K  H  L  C  Q  G  C  G  K  K  S  K  Q  R  N  C  Y  Y  K  A  C  S  T  I  F  G  V  Q  C  L  L  Y  S  R  W  R  L  *  C  R  H  *  K  E  P  N  R  N  P  S  A  I  Y  L  L  S  F  Y  K  R  Y  *  W  H  S  V  P  Q  *  E  S  R  P  L  *  T  C  F  C  G  R  R  *  C  F  R  Q  S  S  H  P  S  L  W  I  S  M  P  E  A  H  *  R  W  R  V  S  V  A  K  C  W  L  C  S  V  S  E  P  I  G  *  F  Q  S  Q  L  *  C  I  *  S  A  F  D  I  *  *  L  F  R  K  L  R  K  M  V  S  A  K  H  Q  A  Q  F  M  *  S  D  I  F  V  Q  L  G  I  K  W  R  R  Q  *  V  Q  F  L  L  L  A  K  I  T  A  N  N  *  T  E  V  A  V  V  S  T  T  S  F  E  T  *  F  L  L  D  *  D  G  S  R  T  V  H  G  E  L  I  *  V  S  M  R  I  I  *  K  F  *  H  R  G  G  L  R  R  F  E  L  I  L  F  R  Y  N  S  Y  V  H  F  D  I  G  V  P  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0143O06.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="51648" stop="51703"/>
                    <exon start="52296" stop="52575"/>
                    <exon start="53070" stop="53585"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>849</number_coding_nucleotides>
                  <number_encoded_amino_acids>283</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VDLLDCMLSCRFGNFLCNSEKEREQAGIYDACGCLWMYLAGLRTSEGSSHAHYNLFYDPLKHNGPILPPAAALAPTVWPQFHLRWACPSEAQGGEVEAECRKLTRKFSELQRAKELAETRLNEASVSVESLVTELRNEKLASTSARDAVKRASKETATIKRAVQSLGFNVYFTADGDCNVGIERNPTEIPQRSICSVFTKDINGTVSHSEKADLSEPVSVAEDNVSDNPLIRVCGSLCPKHTRDGECQLPNAGCAQFQSQLVDFKANFDAFDRLSIYDSYFGS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="58188" PGL_stop="54918"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="58188" e_stop="57846"/>
            <exon e_start="55352" e_stop="54918"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.923" e_score="0.997"/>
          <exon-only e_score="0.979"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="58188" e_stop="57846" e_length="343"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.923">
            <gDNA_intron_boundary i_start="57845" i_stop="55353" i_length="2493"/>
          </intron>
          <exon e_serial="2" e_score="0.979">
            <gDNA_exon_boundary e_start="55352" e_stop="54918" e_length="435"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58188" stop="57846"/>
              <exon start="55352" stop="54918"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U318305" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58176" stop="57846"/>
              <exon start="55352" stop="55064"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U318304" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATTTCCCCAAAGTCAAAAACCTCCAAAAACTTAGCTATGGCGGACACCACAACAACAACAACAATCTCCGGTGACTCTATTACGGTTACCGATGACCAGAAAAACAATCCCACGAACCCACTTGCATCATTTATCTCTAGTGTTCTTCAGCTTTTCAAACCGCCGCCGGCATCTAGTAAGAAGATTGAACCCACCGCTGCTACTTCAGACCTCAAACCAATTGCTTCAGCTGAAAAAGAGGAGAAAGCTGCTGTAGTGAAGTTTCCGCGACAGGATTTGCCTTCGTTGAAGCTCGAAACAGAAGGGGCTGAACCTAATACAAATCCCATTGTCTTGTGGCAG : GTTTATGCTATCGGAGGGTTCTTTGTCTTAAGGTGGGCATGGTCAAGATGGAACGAGCGTCGTGGAAACAGGAAGCCATCCGATGAAGAGCCTCCTCCCAGTCAAGAGTAGACTTTGTACTGCAACATGTTAGAAAAGAGAAAACAAAGAATGACACTTGTGGAGACAGGTTTATGACTTTATTTGAGTCTTGTAAAGTGTTGAAATCACAGTTCTGGTTTTACAGTACTAAATGTAAAAACCCGAATCAAGCTTTACGTCAATTTGCCAGTCAGCATCATTTTGTACAGCCTGTGTTTCAGCCCTTGTTGATAATTCTTGCTAAAGCAAGTGGATGCGTGCATGAGCTATACTGTAAGCTCATATATTTCATTCAACTTGATAAGTTCTTTTTAAATGAAAAGATAGTGCTCTTGAGTACATGATATTTGGAGA</gDNA_template>
            <first_frame> H  F  P  K  V  K  N  L  Q  K  L  S  Y  G  G  H  H  N  N  N  N  N  L  R  *  L  Y  Y  G  Y  R  *  P  E  K  Q  S  H  E  P  T  C  I  I  Y  L  *  C  S  S  A  F  Q  T  A  A  G  I  *  *  E  D  *  T  H  R  C  Y  F  R  P  Q  T  N  C  F  S  *  K  R  G  E  S  C  C  S  E  V  S  A  T  G  F  A  F  V  E  A  R  N  R  R  G  *  T  *  Y  K  S  H  C  L  V  A   : G  L  C  Y  R  R  V  L  C  L  K  V  G  M  V  K  M  E  R  A  S  W  K  Q  E  A  I  R  *  R  A  S  S  Q  S  R  V  D  F  V  L  Q  H  V  R  K  E  K  T  K  N  D  T  C  G  D  R  F  M  T  L  F  E  S  C  K  V  L  K  S  Q  F  W  F  Y  S  T  K  C  K  N  P  N  Q  A  L  R  Q  F  A  S  Q  H  H  F  V  Q  P  V  F  Q  P  L  L  I  I  L  A  K  A  S  G  C  V  H  E  L  Y  C  K  L  I  Y  F  I  Q  L  D  K  F  F  L  N  E  K  I  V  L  L  S  T  *  Y  L  E  </first_frame>
            <second_frame>  I  S  P  K  S  K  T  S  K  N  L  A  M  A  D  T  T  T  T  T  T  I  S  G  D  S  I  T  V  T  D  D  Q  K  N  N  P  T  N  P  L  A  S  F  I  S  S  V  L  Q  L  F  K  P  P  P  A  S  S  K  K  I  E  P  T  A  A  T  S  D  L  K  P  I  A  S  A  E  K  E  E  K  A  A  V  V  K  F  P  R  Q  D  L  P  S  L  K  L  E  T  E  G  A  E  P  N  T  N  P  I  V  L  W  Q  :  V  Y  A  I  G  G  F  F  V  L  R  W  A  W  S  R  W  N  E  R  R  G  N  R  K  P  S  D  E  E  P  P  P  S  Q  E  *  T  L  Y  C  N  M  L  E  K  R  K  Q  R  M  T  L  V  E  T  G  L  *  L  Y  L  S  L  V  K  C  *  N  H  S  S  G  F  T  V  L  N  V  K  T  R  I  K  L  Y  V  N  L  P  V  S  I  I  L  Y  S  L  C  F  S  P  C  *  *  F  L  L  K  Q  V  D  A  C  M  S  Y  T  V  S  S  Y  I  S  F  N  L  I  S  S  F  *  M  K  R  *  C  S  *  V  H  D  I  W  R </second_frame>
            <third_frame>   F  P  Q  S  Q  K  P  P  K  T  *  L  W  R  T  P  Q  Q  Q  Q  Q  S  P  V  T  L  L  R  L  P  M  T  R  K  T  I  P  R  T  H  L  H  H  L  S  L  V  F  F  S  F  S  N  R  R  R  H  L  V  R  R  L  N  P  P  L  L  L  Q  T  S  N  Q  L  L  Q  L  K  K  R  R  K  L  L  *  *  S  F  R  D  R  I  C  L  R  *  S  S  K  Q  K  G  L  N  L  I  Q  I  P  L  S  C  G  R :   F  M  L  S  E  G  S  L  S  *  G  G  H  G  Q  D  G  T  S  V  V  E  T  G  S  H  P  M  K  S  L  L  P  V  K  S  R  L  C  T  A  T  C  *  K  R  E  N  K  E  *  H  L  W  R  Q  V  Y  D  F  I  *  V  L  *  S  V  E  I  T  V  L  V  L  Q  Y  *  M  *  K  P  E  S  S  F  T  S  I  C  Q  S  A  S  F  C  T  A  C  V  S  A  L  V  D  N  S  C  *  S  K  W  M  R  A  *  A  I  L  *  A  H  I  F  H  S  T  *  *  V  L  F  K  *  K  D  S  A  L  E  Y  M  I  F  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0143O06.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="58187" stop="57846"/>
                    <exon start="55352" stop="55242"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>450</number_coding_nucleotides>
                  <number_encoded_amino_acids>150</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ISPKSKTSKNLAMADTTTTTTISGDSITVTDDQKNNPTNPLASFISSVLQLFKPPPASSKKIEPTAATSDLKPIASAEKEEKAAVVKFPRQDLPSLKLETEGAEPNTNPIVLWQVYAIGGFFVLRWAWSRWNERRGNRKPSDEEPPPSQE*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0143O06.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55266" stop="54928"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>336</number_coding_nucleotides>
                  <number_encoded_amino_acids>112</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RASSQSRVDFVLQHVRKEKTKNDTCGDRFMTLFESCKVLKSQFWFYSTKCKNPNQALRQFASQHHFVQPVFQPLLIILAKASGCVHELYCKLIYFIQLDKFFLNEKIVLLST*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="67508" PGL_stop="71432"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="67508" e_stop="67647"/>
            <exon e_start="68228" e_stop="68324"/>
            <exon e_start="69269" e_stop="69366"/>
            <exon e_start="69474" e_stop="69629"/>
            <exon e_start="70145" e_stop="70222"/>
            <exon e_start="70604" e_stop="70735"/>
            <exon e_start="71022" e_stop="71102"/>
            <exon e_start="71254" e_stop="71325"/>
            <exon e_start="71414" e_stop="71432"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.937" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.982" e_score="0.979"/>
          <exon-intron don_prob="0.831" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.237" acc_prob="0.914" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.987" e_score="0.988"/>
          <exon-intron don_prob="0.977" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.895"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="67508" e_stop="67647" e_length="140"/>
          </exon>
          <intron i_serial="1" don_prob="0.937" acc_prob="0.986">
            <gDNA_intron_boundary i_start="67648" i_stop="68227" i_length="580"/>
          </intron>
          <exon e_serial="2" e_score="0.979">
            <gDNA_exon_boundary e_start="68228" e_stop="68324" e_length="97"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.982">
            <gDNA_intron_boundary i_start="68325" i_stop="69268" i_length="944"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="69269" e_stop="69366" e_length="98"/>
          </exon>
          <intron i_serial="3" don_prob="0.831" acc_prob="0.999">
            <gDNA_intron_boundary i_start="69367" i_stop="69473" i_length="107"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="69474" e_stop="69629" e_length="156"/>
          </exon>
          <intron i_serial="4" don_prob="0.979" acc_prob="0.993">
            <gDNA_intron_boundary i_start="69630" i_stop="70144" i_length="515"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="70145" e_stop="70222" e_length="78"/>
          </exon>
          <intron i_serial="5" don_prob="0.237" acc_prob="0.914">
            <gDNA_intron_boundary i_start="70223" i_stop="70603" i_length="381"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="70604" e_stop="70735" e_length="132"/>
          </exon>
          <intron i_serial="6" don_prob="0.984" acc_prob="0.976">
            <gDNA_intron_boundary i_start="70736" i_stop="71021" i_length="286"/>
          </intron>
          <exon e_serial="7" e_score="0.988">
            <gDNA_exon_boundary e_start="71022" e_stop="71102" e_length="81"/>
          </exon>
          <intron i_serial="7" don_prob="0.995" acc_prob="0.987">
            <gDNA_intron_boundary i_start="71103" i_stop="71253" i_length="151"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="71254" e_stop="71325" e_length="72"/>
          </exon>
          <intron i_serial="8" don_prob="0.977" acc_prob="0.999">
            <gDNA_intron_boundary i_start="71326" i_stop="71413" i_length="88"/>
          </intron>
          <exon e_serial="9" e_score="0.895">
            <gDNA_exon_boundary e_start="71414" e_stop="71432" e_length="19"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67508" stop="67647"/>
              <exon start="68228" stop="68324"/>
              <exon start="69269" stop="69366"/>
              <exon start="69474" stop="69629"/>
              <exon start="70145" stop="70222"/>
              <exon start="70604" stop="70735"/>
              <exon start="71022" stop="71102"/>
              <exon start="71254" stop="71325"/>
              <exon start="71414" stop="71432"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326073" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CATTATTCTACTATTTTTCTCTGAACTGAGCTCACTCACCGCAGTTTCAGTGACGATCGGCTACCGGAAAAATGCACTCGACGAACTTGCTTCTCGAAGAACCGATTCGAATGGCTTCGATTCTCGAGCCATCAAAGCCT : ACGTTTTTTCCAGCAATGACGAAGATTGTTGGCACGCTGGGTCCAAAATCACGTTCGGTGGAGATTATCTCTAGTTGCCTTGAATCGGGAATGTCTG : TGGCACGATTTGACTTTTCATGGGGAGATGCCGAATTTCACCAAGAGACATTGGAAAATCTAAGGGCAGCCGTCAAAAAATCAAAGAAGCTCTGTGCG : GTTATGCTAGACACTGGTGGTCCTGAACTACAAGTTGTCAATAAGAGCGAACACCCAATTTCACTCCAAGCAGATTCCTTAGTTGTCCTGACACCTGATCAAGATAAAGAGGCTACACCAAATCTACTGCCAATAAATTTTAGTGGCCTATCAAAG : TCAGTGAAGAAAGGAGACACTATTTTCATTGGTCAGTACTTGTTCACGGGAAGTGAGACTACCTCTGTGTGGCTAGAG : GTAACAGAGGTGAAAGGAGAGGATGTCGTTTGCTTGATTAAAAATTCTGCCACCTTGGCCGGACCATTGTACACATTACATGTCTCCCAGATCCGTATTGAGTTGCCAACTCTGACGGACAAAGATAAGAAG : GTTATAAGCACTTGGGCCTTTCGAAACAAAATAGATATCCTTTCACTGTCATATACACGAAATGCTGAAGATGTTCGACAT : GCTCGTGAATTTCTATCTAAGCTGGGTGATCTTGATCAAACACAGATTTTTGCTAAGATAGAAAATGTGGAG : GGAATGGGCAACTTTGATG</gDNA_template>
            <first_frame> H  Y  S  T  I  F  L  *  T  E  L  T  H  R  S  F  S  D  D  R  L  P  E  K  C  T  R  R  T  C  F  S  K  N  R  F  E  W  L  R  F  S  S  H  Q  S  L :   R  F  F  Q  Q  *  R  R  L  L  A  R  W  V  Q  N  H  V  R  W  R  L  S  L  V  A  L  N  R  E  C  L  :  W  H  D  L  T  F  H  G  E  M  P  N  F  T  K  R  H  W  K  I  *  G  Q  P  S  K  N  Q  R  S  S  V  R :   L  C  *  T  L  V  V  L  N  Y  K  L  S  I  R  A  N  T  Q  F  H  S  K  Q  I  P  *  L  S  *  H  L  I  K  I  K  R  L  H  Q  I  Y  C  Q  *  I  L  V  A  Y  Q  S :   Q  *  R  K  E  T  L  F  S  L  V  S  T  C  S  R  E  V  R  L  P  L  C  G  *  R :   *  Q  R  *  K  E  R  M  S  F  A  *  L  K  I  L  P  P  W  P  D  H  C  T  H  Y  M  S  P  R  S  V  L  S  C  Q  L  *  R  T  K  I  R  R :   L  *  A  L  G  P  F  E  T  K  *  I  S  F  H  C  H  I  H  E  M  L  K  M  F  D  M :   L  V  N  F  Y  L  S  W  V  I  L  I  K  H  R  F  L  L  R  *  K  M  W  R :   E  W  A  T  L  M </first_frame>
            <second_frame>  I  I  L  L  F  F  S  E  L  S  S  L  T  A  V  S  V  T  I  G  Y  R  K  N  A  L  D  E  L  A  S  R  R  T  D  S  N  G  F  D  S  R  A  I  K  A   : Y  V  F  S  S  N  D  E  D  C  W  H  A  G  S  K  I  T  F  G  G  D  Y  L  *  L  P  *  I  G  N  V  C :   G  T  I  *  L  F  M  G  R  C  R  I  S  P  R  D  I  G  K  S  K  G  S  R  Q  K  I  K  E  A  L  C   : G  Y  A  R  H  W  W  S  *  T  T  S  C  Q  *  E  R  T  P  N  F  T  P  S  R  F  L  S  C  P  D  T  *  S  R  *  R  G  Y  T  K  S  T  A  N  K  F  *  W  P  I  K   : V  S  E  E  R  R  H  Y  F  H  W  S  V  L  V  H  G  K  *  D  Y  L  C  V  A  R   : G  N  R  G  E  R  R  G  C  R  L  L  D  *  K  F  C  H  L  G  R  T  I  V  H  I  T  C  L  P  D  P  Y  *  V  A  N  S  D  G  Q  R  *  E   : G  Y  K  H  L  G  L  S  K  Q  N  R  Y  P  F  T  V  I  Y  T  K  C  *  R  C  S  T   : C  S  *  I  S  I  *  A  G  *  S  *  S  N  T  D  F  C  *  D  R  K  C  G   : G  N  G  Q  L  *   </second_frame>
            <third_frame>   L  F  Y  Y  F  S  L  N  *  A  H  S  P  Q  F  Q  *  R  S  A  T  G  K  M  H  S  T  N  L  L  L  E  E  P  I  R  M  A  S  I  L  E  P  S  K  P  :  T  F  F  P  A  M  T  K  I  V  G  T  L  G  P  K  S  R  S  V  E  I  I  S  S  C  L  E  S  G  M  S   : V  A  R  F  D  F  S  W  G  D  A  E  F  H  Q  E  T  L  E  N  L  R  A  A  V  K  K  S  K  K  L  C  A  :  V  M  L  D  T  G  G  P  E  L  Q  V  V  N  K  S  E  H  P  I  S  L  Q  A  D  S  L  V  V  L  T  P  D  Q  D  K  E  A  T  P  N  L  L  P  I  N  F  S  G  L  S  K  :  S  V  K  K  G  D  T  I  F  I  G  Q  Y  L  F  T  G  S  E  T  T  S  V  W  L  E  :  V  T  E  V  K  G  E  D  V  V  C  L  I  K  N  S  A  T  L  A  G  P  L  Y  T  L  H  V  S  Q  I  R  I  E  L  P  T  L  T  D  K  D  K  K  :  V  I  S  T  W  A  F  R  N  K  I  D  I  L  S  L  S  Y  T  R  N  A  E  D  V  R  H  :  A  R  E  F  L  S  K  L  G  D  L  D  Q  T  Q  I  F  A  K  I  E  N  V  E  :  G  M  G  N  F  D  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0143O06.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67561" stop="67647"/>
                    <exon start="68228" stop="68324"/>
                    <exon start="69269" stop="69366"/>
                    <exon start="69474" stop="69629"/>
                    <exon start="70145" stop="70222"/>
                    <exon start="70604" stop="70735"/>
                    <exon start="71022" stop="71102"/>
                    <exon start="71254" stop="71325"/>
                    <exon start="71414" stop="71431"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>819</number_coding_nucleotides>
                  <number_encoded_amino_acids>273</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSATGKMHSTNLLLEEPIRMASILEPSKPTFFPAMTKIVGTLGPKSRSVEIISSCLESGMSVARFDFSWGDAEFHQETLENLRAAVKKSKKLCAVMLDTGGPELQVVNKSEHPISLQADSLVVLTPDQDKEATPNLLPINFSGLSKSVKKGDTIFIGQYLFTGSETTSVWLEVTEVKGEDVVCLIKNSATLAGPLYTLHVSQIRIELPTLTDKDKKVISTWAFRNKIDILSLSYTRNAEDVRHAREFLSKLGDLDQTQIFAKIENVEGMGNFD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="73259" PGL_stop="77787"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="73259" e_stop="73445"/>
            <exon e_start="74582" e_stop="74677"/>
            <exon e_start="74795" e_stop="74862"/>
            <exon e_start="75039" e_stop="75138"/>
            <exon e_start="75736" e_stop="75795"/>
            <exon e_start="77087" e_stop="77253"/>
            <exon e_start="77325" e_stop="77787"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.982" acc_prob="0.822" e_score="1.000"/>
          <exon-intron don_prob="0.823" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.964" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.970" e_score="0.980"/>
          <exon-intron don_prob="0.993" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.280" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="73259" e_stop="73445" e_length="187"/>
          </exon>
          <intron i_serial="1" don_prob="0.982" acc_prob="0.822">
            <gDNA_intron_boundary i_start="73446" i_stop="74581" i_length="1136"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="74582" e_stop="74677" e_length="96"/>
          </exon>
          <intron i_serial="2" don_prob="0.823" acc_prob="0.982">
            <gDNA_intron_boundary i_start="74678" i_stop="74794" i_length="117"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="74795" e_stop="74862" e_length="68"/>
          </exon>
          <intron i_serial="3" don_prob="0.964" acc_prob="0.980">
            <gDNA_intron_boundary i_start="74863" i_stop="75038" i_length="176"/>
          </intron>
          <exon e_serial="4" e_score="0.980">
            <gDNA_exon_boundary e_start="75039" e_stop="75138" e_length="100"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.970">
            <gDNA_intron_boundary i_start="75139" i_stop="75735" i_length="597"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="75736" e_stop="75795" e_length="60"/>
          </exon>
          <intron i_serial="5" don_prob="0.993" acc_prob="0.996">
            <gDNA_intron_boundary i_start="75796" i_stop="77086" i_length="1291"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="77087" e_stop="77253" e_length="167"/>
          </exon>
          <intron i_serial="6" don_prob="0.280" acc_prob="0.000">
            <gDNA_intron_boundary i_start="77254" i_stop="77324" i_length="71"/>
          </intron>
          <exon e_serial="7" e_score="0.987">
            <gDNA_exon_boundary e_start="77325" e_stop="77787" e_length="463"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73259" stop="73445"/>
              <exon start="74582" stop="74677"/>
              <exon start="74795" stop="74862"/>
              <exon start="75039" stop="75138"/>
              <exon start="75736" stop="75795"/>
              <exon start="77087" stop="77253"/>
              <exon start="77325" stop="77787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U320058" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAATGGGGAATATATGCTAAATACTTGTGGTAGGTATAAACGTGCCTTTTTTGTGCTTGTCTCCAAGATGCTTCATATCAATTTTCTTTCATCCCAGGTAGTGATGCAATTCTTCTAGGTGCAGAGACCCTGAGAGGTCTATATCCTGTTGAGACTATTTCCACTGTTGGTAAAATTTGTGCAGAG : GCAGAAAAGGTTTATAATCAAGATGTCTATTTTAAGAGGGCTGTTAAGTGTGTGGGAGAACCAATGACTCACTTGGAATCTATTGCTTCCTCAGCG : GTACGCGCTGCCATCAAGGTCAAGGCATCTGTTATTATCTGCTTCACTTCTTCAGGGAGAGCTGCGAG : ATTGATAGCTAAGTATAGGCCACCGATGCCAGTTTTATCTGTTGTCATTCCTCGTCTCAAGACAAACCAACTGCGCTGGACATTCAGTGGTGCATTTCAG : GCTAGGCAGTCTCTTATTGTTAGAGGAATTTTCCCCATCCTTGCAGATCCAAGACATCCG : GCTGAGTCCGCAAATGCAACTGATGAGTCGATATTGAAGGTTGCACTAGACCATGGGAAAACAGCTGGTGTTATAAAACCACATGACCGAGTTGTTGTTTTCCAGAAAGTTGGTGACGCATCTGTGGTGAAGATCATTGAGCTTGAAAATTAGGCTAGTACATCTTT : GTTGATCCATGGCTGTAATAATTGCTCCGGACCGATGTAAATCCTCTGTAAGTAATGCTTACCACTTTAAGTTGTAAGATTATTATCTTTTAAGACGCTGTCATCTTTAACAAATCTCTTTTTTTTTCTCTAATCCATATGTTGTGTAGGCTGTGAAGGGTGTCAACCTACTTTGCTTCACTATTTTTGTGTATCAAATAGTATTATATATATCTTCAGGTAAATAAGTAGTTATAATTGCTATCTTATGAATGGAGTAGTGATATATAAGAACCTTCTTTTCTTGATGATAACAAACTCTTCATAGGAAGATTGTCAAACATTTGTTCTAGGAGAGTGAAATCATCAAGAATTCAAGATTAATTCAAGAGTAAACCTTCTATTAGTGAAGTCGTATACCTTTAGGGGTTGTTTGGTTGGAAACAAGTTATTCAGGATTAATTGTTTCGGATAAATTATTCCA</gDNA_template>
            <first_frame> K  M  G  N  I  C  *  I  L  V  V  G  I  N  V  P  F  L  C  L  S  P  R  C  F  I  S  I  F  F  H  P  R  *  *  C  N  S  S  R  C  R  D  P  E  R  S  I  S  C  *  D  Y  F  H  C  W  *  N  L  C  R   : G  R  K  G  L  *  S  R  C  L  F  *  E  G  C  *  V  C  G  R  T  N  D  S  L  G  I  Y  C  F  L  S   : G  T  R  C  H  Q  G  Q  G  I  C  Y  Y  L  L  H  F  F  R  E  S  C  E  :  I  D  S  *  V  *  A  T  D  A  S  F  I  C  C  H  S  S  S  Q  D  K  P  T  A  L  D  I  Q  W  C  I  S   : G  *  A  V  S  Y  C  *  R  N  F  P  H  P  C  R  S  K  T  S   : G  *  V  R  K  C  N  *  *  V  D  I  E  G  C  T  R  P  W  E  N  S  W  C  Y  K  T  T  *  P  S  C  C  F  P  E  S  W  *  R  I  C  G  E  D  H  *  A  *  K  L  G  *  Y  I  F  :  V  D  P  W  L  *  *  L  L  R  T  D  V  N  P  L  *  V  M  L  T  T  L  S  C  K  I  I  I  F  *  D  A  V  I  F  N  K  S  L  F  F  S  L  I  H  M  L  C  R  L  *  R  V  S  T  Y  F  A  S  L  F  L  C  I  K  *  Y  Y  I  Y  L  Q  V  N  K  *  L  *  L  L  S  Y  E  W  S  S  D  I  *  E  P  S  F  L  D  D  N  K  L  F  I  G  R  L  S  N  I  C  S  R  R  V  K  S  S  R  I  Q  D  *  F  K  S  K  P  S  I  S  E  V  V  Y  L  *  G  L  F  G  W  K  Q  V  I  Q  D  *  L  F  R  I  N  Y  S  </first_frame>
            <second_frame>  K  W  G  I  Y  A  K  Y  L  W  *  V  *  T  C  L  F  C  A  C  L  Q  D  A  S  Y  Q  F  S  F  I  P  G  S  D  A  I  L  L  G  A  E  T  L  R  G  L  Y  P  V  E  T  I  S  T  V  G  K  I  C  A  E  :  A  E  K  V  Y  N  Q  D  V  Y  F  K  R  A  V  K  C  V  G  E  P  M  T  H  L  E  S  I  A  S  S  A  :  V  R  A  A  I  K  V  K  A  S  V  I  I  C  F  T  S  S  G  R  A  A  R :   L  I  A  K  Y  R  P  P  M  P  V  L  S  V  V  I  P  R  L  K  T  N  Q  L  R  W  T  F  S  G  A  F  Q  :  A  R  Q  S  L  I  V  R  G  I  F  P  I  L  A  D  P  R  H  P  :  A  E  S  A  N  A  T  D  E  S  I  L  K  V  A  L  D  H  G  K  T  A  G  V  I  K  P  H  D  R  V  V  V  F  Q  K  V  G  D  A  S  V  V  K  I  I  E  L  E  N  *  A  S  T  S  L :   L  I  H  G  C  N  N  C  S  G  P  M  *  I  L  C  K  *  C  L  P  L  *  V  V  R  L  L  S  F  K  T  L  S  S  L  T  N  L  F  F  F  L  *  S  I  C  C  V  G  C  E  G  C  Q  P  T  L  L  H  Y  F  C  V  S  N  S  I  I  Y  I  F  R  *  I  S  S  Y  N  C  Y  L  M  N  G  V  V  I  Y  K  N  L  L  F  L  M  I  T  N  S  S  *  E  D  C  Q  T  F  V  L  G  E  *  N  H  Q  E  F  K  I  N  S  R  V  N  L  L  L  V  K  S  Y  T  F  R  G  C  L  V  G  N  K  L  F  R  I  N  C  F  G  *  I  I  P </second_frame>
            <third_frame>   N  G  E  Y  M  L  N  T  C  G  R  Y  K  R  A  F  F  V  L  V  S  K  M  L  H  I  N  F  L  S  S  Q  V  V  M  Q  F  F  *  V  Q  R  P  *  E  V  Y  I  L  L  R  L  F  P  L  L  V  K  F  V  Q  R :   Q  K  R  F  I  I  K  M  S  I  L  R  G  L  L  S  V  W  E  N  Q  *  L  T  W  N  L  L  L  P  Q  R :   Y  A  L  P  S  R  S  R  H  L  L  L  S  A  S  L  L  Q  G  E  L  R   : D  *  *  L  S  I  G  H  R  C  Q  F  Y  L  L  S  F  L  V  S  R  Q  T  N  C  A  G  H  S  V  V  H  F  R :   L  G  S  L  L  L  L  E  E  F  S  P  S  L  Q  I  Q  D  I  R :   L  S  P  Q  M  Q  L  M  S  R  Y  *  R  L  H  *  T  M  G  K  Q  L  V  L  *  N  H  M  T  E  L  L  F  S  R  K  L  V  T  H  L  W  *  R  S  L  S  L  K  I  R  L  V  H  L   : C  *  S  M  A  V  I  I  A  P  D  R  C  K  S  S  V  S  N  A  Y  H  F  K  L  *  D  Y  Y  L  L  R  R  C  H  L  *  Q  I  S  F  F  F  S  N  P  Y  V  V  *  A  V  K  G  V  N  L  L  C  F  T  I  F  V  Y  Q  I  V  L  Y  I  S  S  G  K  *  V  V  I  I  A  I  L  *  M  E  *  *  Y  I  R  T  F  F  S  *  *  *  Q  T  L  H  R  K  I  V  K  H  L  F  *  E  S  E  I  I  K  N  S  R  L  I  Q  E  *  T  F  Y  *  *  S  R  I  P  L  G  V  V  W  L  E  T  S  Y  S  G  L  I  V  S  D  K  L  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0143O06.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73299" stop="73445"/>
                    <exon start="74582" stop="74677"/>
                    <exon start="74795" stop="74862"/>
                    <exon start="75039" stop="75138"/>
                    <exon start="75736" stop="75795"/>
                    <exon start="77087" stop="77239"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>621</number_coding_nucleotides>
                  <number_encoded_amino_acids>207</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TCLFCACLQDASYQFSFIPGSDAILLGAETLRGLYPVETISTVGKICAEAEKVYNQDVYFKRAVKCVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPPMPVLSVVIPRLKTNQLRWTFSGAFQARQSLIVRGIFPILADPRHPAESANATDESILKVALDHGKTAGVIKPHDRVVVFQKVGDASVVKIIELEN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="77123" e_stop="77397"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="77123" e_stop="77397" e_length="275"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77123" stop="77397"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U320059" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGGTTGCACTAGACCATGGGAAAACAGCTGGTGTTATAAAACCACATGACCGAGTTGTTGTTTTCCAGAAAGTTGGTGACGCATCTGTGGTGAAGATCATTGAGCTTGAAAATTAGGCTAGTACATCTTTGTATGTTTCACTCAGAGCATTCTCAAGTTAACAGAATGCATGAAAACCATCTAATGGAGCTATAAAACCAGGTTGATCCATGGCTGTAATAATTGCTCCGGACCGATGTAAATCCTCTGTAAGTAATGCTTACCACTTTAAGTT</gDNA_template>
            <first_frame> K  V  A  L  D  H  G  K  T  A  G  V  I  K  P  H  D  R  V  V  V  F  Q  K  V  G  D  A  S  V  V  K  I  I  E  L  E  N  *  A  S  T  S  L  Y  V  S  L  R  A  F  S  S  *  Q  N  A  *  K  P  S  N  G  A  I  K  P  G  *  S  M  A  V  I  I  A  P  D  R  C  K  S  S  V  S  N  A  Y  H  F  K   </first_frame>
            <second_frame>  R  L  H  *  T  M  G  K  Q  L  V  L  *  N  H  M  T  E  L  L  F  S  R  K  L  V  T  H  L  W  *  R  S  L  S  L  K  I  R  L  V  H  L  C  M  F  H  S  E  H  S  Q  V  N  R  M  H  E  N  H  L  M  E  L  *  N  Q  V  D  P  W  L  *  *  L  L  R  T  D  V  N  P  L  *  V  M  L  T  T  L  S  </second_frame>
            <third_frame>   G  C  T  R  P  W  E  N  S  W  C  Y  K  T  T  *  P  S  C  C  F  P  E  S  W  *  R  I  C  G  E  D  H  *  A  *  K  L  G  *  Y  I  F  V  C  F  T  Q  S  I  L  K  L  T  E  C  M  K  T  I  *  W  S  Y  K  T  R  L  I  H  G  C  N  N  C  S  G  P  M  *  I  L  C  K  *  C  L  P  L  *  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C11HBa0143O06.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="75059" e_stop="75138"/>
            <exon e_start="75736" e_stop="75795"/>
            <exon e_start="77087" e_stop="77239"/>
            <exon e_start="77325" e_stop="77371"/>
            <exon e_start="77474" e_stop="77700"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.970" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.716" e_score="1.000"/>
          <exon-only e_score="0.978"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="75059" e_stop="75138" e_length="80"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.970">
            <gDNA_intron_boundary i_start="75139" i_stop="75735" i_length="597"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="75736" e_stop="75795" e_length="60"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="0.996">
            <gDNA_intron_boundary i_start="75796" i_stop="77086" i_length="1291"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="77087" e_stop="77239" e_length="153"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.000">
            <gDNA_intron_boundary i_start="77240" i_stop="77324" i_length="85"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="77325" e_stop="77371" e_length="47"/>
          </exon>
          <intron i_serial="4" don_prob="0.987" acc_prob="0.716">
            <gDNA_intron_boundary i_start="77372" i_stop="77473" i_length="102"/>
          </intron>
          <exon e_serial="5" e_score="0.978">
            <gDNA_exon_boundary e_start="77474" e_stop="77700" e_length="227"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75059" stop="75138"/>
              <exon start="75736" stop="75795"/>
              <exon start="77087" stop="77239"/>
              <exon start="77325" stop="77371"/>
              <exon start="77474" stop="77700"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U337008" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CACCGATGCCAGTTTTATCTGTTGTCATTCCTCGTCTCAAGACAAACCAACTGCGCTGGACATTCAGTGGTGCATTTCAG : GCTAGGCAGTCTCTTATTGTTAGAGGAATTTTCCCCATCCTTGCAGATCCAAGACATCCG : GCTGAGTCCGCAAATGCAACTGATGAGTCGATATTGAAGGTTGCACTAGACCATGGGAAAACAGCTGGTGTTATAAAACCACATGACCGAGTTGTTGTTTTCCAGAAAGTTGGTGACGCATCTGTGGTGAAGATCATTGAGCTTGAAAATTAG : GTTGATCCATGGCTGTAATAATTGCTCCGGACCGATGTAAATCCTCT : GCTGTGAAGGGTGTCAACCTACTTTGCTTCACTATTTTTGTGTATCAAATAGTATTATATATATCTTCAGGTAAATAAGTAGTTATAATTGCTATCTTATGAATGGAGTAGTGATATATAAGAACCTTCTTTTCTTGATGATAACAAACTCTTCATAGGAAGATTGTCAAACATTTGTTCTAGGAGAGTGAAATCATCAAGAATTCAAGATTAATTCAAGAGTAAAC</gDNA_template>
            <first_frame> H  R  C  Q  F  Y  L  L  S  F  L  V  S  R  Q  T  N  C  A  G  H  S  V  V  H  F  R :   L  G  S  L  L  L  L  E  E  F  S  P  S  L  Q  I  Q  D  I  R :   L  S  P  Q  M  Q  L  M  S  R  Y  *  R  L  H  *  T  M  G  K  Q  L  V  L  *  N  H  M  T  E  L  L  F  S  R  K  L  V  T  H  L  W  *  R  S  L  S  L  K  I  R :   L  I  H  G  C  N  N  C  S  G  P  M  *  I  L   : C  C  E  G  C  Q  P  T  L  L  H  Y  F  C  V  S  N  S  I  I  Y  I  F  R  *  I  S  S  Y  N  C  Y  L  M  N  G  V  V  I  Y  K  N  L  L  F  L  M  I  T  N  S  S  *  E  D  C  Q  T  F  V  L  G  E  *  N  H  Q  E  F  K  I  N  S  R  V  N </first_frame>
            <second_frame>  T  D  A  S  F  I  C  C  H  S  S  S  Q  D  K  P  T  A  L  D  I  Q  W  C  I  S   : G  *  A  V  S  Y  C  *  R  N  F  P  H  P  C  R  S  K  T  S   : G  *  V  R  K  C  N  *  *  V  D  I  E  G  C  T  R  P  W  E  N  S  W  C  Y  K  T  T  *  P  S  C  C  F  P  E  S  W  *  R  I  C  G  E  D  H  *  A  *  K  L   : G  *  S  M  A  V  I  I  A  P  D  R  C  K  S  S  :  A  V  K  G  V  N  L  L  C  F  T  I  F  V  Y  Q  I  V  L  Y  I  S  S  G  K  *  V  V  I  I  A  I  L  *  M  E  *  *  Y  I  R  T  F  F  S  *  *  *  Q  T  L  H  R  K  I  V  K  H  L  F  *  E  S  E  I  I  K  N  S  R  L  I  Q  E  *   </second_frame>
            <third_frame>   P  M  P  V  L  S  V  V  I  P  R  L  K  T  N  Q  L  R  W  T  F  S  G  A  F  Q  :  A  R  Q  S  L  I  V  R  G  I  F  P  I  L  A  D  P  R  H  P  :  A  E  S  A  N  A  T  D  E  S  I  L  K  V  A  L  D  H  G  K  T  A  G  V  I  K  P  H  D  R  V  V  V  F  Q  K  V  G  D  A  S  V  V  K  I  I  E  L  E  N  *  :  V  D  P  W  L  *  *  L  L  R  T  D  V  N  P  L :   L  *  R  V  S  T  Y  F  A  S  L  F  L  C  I  K  *  Y  Y  I  Y  L  Q  V  N  K  *  L  *  L  L  S  Y  E  W  S  S  D  I  *  E  P  S  F  L  D  D  N  K  L  F  I  G  R  L  S  N  I  C  S  R  R  V  K  S  S  R  I  Q  D  *  F  K  S  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0143O06.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75061" stop="75138"/>
                    <exon start="75736" stop="75795"/>
                    <exon start="77087" stop="77239"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>288</number_coding_nucleotides>
                  <number_encoded_amino_acids>96</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PMPVLSVVIPRLKTNQLRWTFSGAFQARQSLIVRGIFPILADPRHPAESANATDESILKVALDHGKTAGVIKPHDRVVVFQKVGDASVVKIIELEN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="81553" PGL_stop="80201"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="81553" e_stop="81479"/>
            <exon e_start="81387" e_stop="81295"/>
            <exon e_start="80820" e_stop="80201"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.628" acc_prob="0.993" e_score="0.960"/>
          <exon-intron don_prob="0.901" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.960">
            <gDNA_exon_boundary e_start="81553" e_stop="81479" e_length="75"/>
          </exon>
          <intron i_serial="1" don_prob="0.628" acc_prob="0.993">
            <gDNA_intron_boundary i_start="81478" i_stop="81388" i_length="91"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="81387" e_stop="81295" e_length="93"/>
          </exon>
          <intron i_serial="2" don_prob="0.901" acc_prob="0.999">
            <gDNA_intron_boundary i_start="81294" i_stop="80821" i_length="474"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="80820" e_stop="80201" e_length="620"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81553" stop="81479"/>
              <exon start="81387" stop="81295"/>
              <exon start="80820" stop="80201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U331760" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GATGAAACCAAACATTGTTCCTAGTTGTATTAGATCAGAAAATTACATGATCACTTTCGAGGTTGAGGAAGAAAA : GTTTCCTTTCTTTGGTAAGAAGTATCAATTGAAGTTTGCAAGTGACATCTCTGCTGAAACCCAATGTTTGGTTCATTTTCCAAGCCTGCTCAG : GTTGGCGAGAGAGGCTGGCCTTGAGCACACGGAGATTCAGAACTTGACAGATTTTTATGATGATAACAGGTAATAGATTGTAACTTACAACTTCACCATCATGGCTGTTTCATTTTGCTTGTTTACCATCTTAATCTATCATATGAAATTACCTGAATTTTTATCACATCATTGATGAAGCCATGAAGGTAAAGTGATGATTCTCTTGAAGTTTAACTTTAAAATGTGATAGTTTATTGCATAGGGAATTTATATTCTTCATGGCAATGCACATGCCAAAAAGTAGTGTATACATGCCTTGCATAGTACTCAGATGGATGTATTATTGGGTGGGAACCCAACTTCAGATCAACTTTTATCATGTTGTGAAGTGTTCAGTCTTTGTCTCACCAAGTACACCATAATATTTCCTAGCAAGTGCGGAAGAAAATGGTTTCCCATCACTTGATCATTTTTCCTACCTTTTAAGAATTTAATGGGTCACTTATAGTATACTGATTTTATTTTTCTAATTATGTCTACTTTTCCTTTTCTTTTGGTTGTTAAAATTTATTGATTTCTTTAGAAGGTTTATGAGGGTTGTTAGCTGGACAGGAATAACTCCAGCATGGAATTATTGC</gDNA_template>
            <first_frame> D  E  T  K  H  C  S  *  L  Y  *  I  R  K  L  H  D  H  F  R  G  *  G  R  K  :  V  S  F  L  W  *  E  V  S  I  E  V  C  K  *  H  L  C  *  N  P  M  F  G  S  F  S  K  P  A  Q  :  V  G  E  R  G  W  P  *  A  H  G  D  S  E  L  D  R  F  L  *  *  *  Q  V  I  D  C  N  L  Q  L  H  H  H  G  C  F  I  L  L  V  Y  H  L  N  L  S  Y  E  I  T  *  I  F  I  T  S  L  M  K  P  *  R  *  S  D  D  S  L  E  V  *  L  *  N  V  I  V  Y  C  I  G  N  L  Y  S  S  W  Q  C  T  C  Q  K  V  V  Y  T  C  L  A  *  Y  S  D  G  C  I  I  G  W  E  P  N  F  R  S  T  F  I  M  L  *  S  V  Q  S  L  S  H  Q  V  H  H  N  I  S  *  Q  V  R  K  K  M  V  S  H  H  L  I  I  F  P  T  F  *  E  F  N  G  S  L  I  V  Y  *  F  Y  F  S  N  Y  V  Y  F  S  F  S  F  G  C  *  N  L  L  I  S  L  E  G  L  *  G  L  L  A  G  Q  E  *  L  Q  H  G  I  I   </first_frame>
            <second_frame>  M  K  P  N  I  V  P  S  C  I  R  S  E  N  Y  M  I  T  F  E  V  E  E  E  K :   F  P  F  F  G  K  K  Y  Q  L  K  F  A  S  D  I  S  A  E  T  Q  C  L  V  H  F  P  S  L  L  R :   L  A  R  E  A  G  L  E  H  T  E  I  Q  N  L  T  D  F  Y  D  D  N  R  *  *  I  V  T  Y  N  F  T  I  M  A  V  S  F  C  L  F  T  I  L  I  Y  H  M  K  L  P  E  F  L  S  H  H  *  *  S  H  E  G  K  V  M  I  L  L  K  F  N  F  K  M  *  *  F  I  A  *  G  I  Y  I  L  H  G  N  A  H  A  K  K  *  C  I  H  A  L  H  S  T  Q  M  D  V  L  L  G  G  N  P  T  S  D  Q  L  L  S  C  C  E  V  F  S  L  C  L  T  K  Y  T  I  I  F  P  S  K  C  G  R  K  W  F  P  I  T  *  S  F  F  L  P  F  K  N  L  M  G  H  L  *  Y  T  D  F  I  F  L  I  M  S  T  F  P  F  L  L  V  V  K  I  Y  *  F  L  *  K  V  Y  E  G  C  *  L  D  R  N  N  S  S  M  E  L  L  </second_frame>
            <third_frame>   *  N  Q  T  L  F  L  V  V  L  D  Q  K  I  T  *  S  L  S  R  L  R  K  K   : S  F  L  S  L  V  R  S  I  N  *  S  L  Q  V  T  S  L  L  K  P  N  V  W  F  I  F  Q  A  C  S   : G  W  R  E  R  L  A  L  S  T  R  R  F  R  T  *  Q  I  F  M  M  I  T  G  N  R  L  *  L  T  T  S  P  S  W  L  F  H  F  A  C  L  P  S  *  S  I  I  *  N  Y  L  N  F  Y  H  I  I  D  E  A  M  K  V  K  *  *  F  S  *  S  L  T  L  K  C  D  S  L  L  H  R  E  F  I  F  F  M  A  M  H  M  P  K  S  S  V  Y  M  P  C  I  V  L  R  W  M  Y  Y  W  V  G  T  Q  L  Q  I  N  F  Y  H  V  V  K  C  S  V  F  V  S  P  S  T  P  *  Y  F  L  A  S  A  E  E  N  G  F  P  S  L  D  H  F  S  Y  L  L  R  I  *  W  V  T  Y  S  I  L  I  L  F  F  *  L  C  L  L  F  L  F  F  W  L  L  K  F  I  D  F  F  R  R  F  M  R  V  V  S  W  T  G  I  T  P  A  W  N  Y  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0143O06.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="81552" stop="81479"/>
                    <exon start="81387" stop="81295"/>
                    <exon start="80820" stop="80748"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MKPNIVPSCIRSENYMITFEVEEEKFPFFGKKYQLKFASDISAETQCLVHFPSLLRLAREAGLEHTEIQNLTDFYDDNR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0143O06.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="80611" stop="80417"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLTLKCDSLLHREFIFFMAMHMPKSSVYMPCIVLRWMYYWVGTQLQINFYHVVKCSVFVSPSTP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="85068" PGL_stop="82918"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85068" e_stop="84911"/>
            <exon e_start="84610" e_stop="84532"/>
            <exon e_start="83807" e_stop="83713"/>
            <exon e_start="83136" e_stop="83065"/>
            <exon e_start="82977" e_stop="82918"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.987" e_score="0.994"/>
          <exon-intron don_prob="0.968" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.953" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="0.958"/>
          <exon-only e_score="0.950"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="85068" e_stop="84911" e_length="158"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.987">
            <gDNA_intron_boundary i_start="84910" i_stop="84611" i_length="300"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="84610" e_stop="84532" e_length="79"/>
          </exon>
          <intron i_serial="2" don_prob="0.968" acc_prob="0.996">
            <gDNA_intron_boundary i_start="84531" i_stop="83808" i_length="724"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="83807" e_stop="83713" e_length="95"/>
          </exon>
          <intron i_serial="3" don_prob="0.953" acc_prob="0.999">
            <gDNA_intron_boundary i_start="83712" i_stop="83137" i_length="576"/>
          </intron>
          <exon e_serial="4" e_score="0.958">
            <gDNA_exon_boundary e_start="83136" e_stop="83065" e_length="72"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="83064" i_stop="82978" i_length="87"/>
          </intron>
          <exon e_serial="5" e_score="0.950">
            <gDNA_exon_boundary e_start="82977" e_stop="82918" e_length="60"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85068" stop="84911"/>
              <exon start="84610" stop="84532"/>
              <exon start="83807" stop="83713"/>
              <exon start="83136" stop="83065"/>
              <exon start="82977" stop="82918"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U346222" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGAACGAGAGCAGTAGGGTTTTTGTGTGGGTTTTAGAGGCGATGATGATGATGGCGAATTCATTCCCGATTCACAGACCTGCCGAGTCAACTCACCATCGACTTCTCGATTTCGTCAAAAATGTGCTTATCGGTATCTTCGTCTCCCCATATGCCACT : GTATGTGATATGTATTGTGGAAAAGTACCTGATGTGGAGAAGTGGGATGAAGCTCAAATTGGTCACTATATTGGCATTG : ATGTGGAAGCTTCGGGAGTGAATGAAGTGAAGGAAGCGTGGGAGAGTCAGCGGAAGGCTTACACATCTGAGTTCATTGAGCTCGATCTTTGTATT : GAAGATATAGAATCATTTTGGAAGGACAAGGAAAAGCAGGCCGATGTTGTTTTCTGCATGCACAATTTACAG : GCGTGCTTTGATAGTGAAGAGAAAGCAAGGAGGCTATTGCATAATGTATCAGCTTTGCTT</gDNA_template>
            <first_frame> *  T  R  A  V  G  F  L  C  G  F  *  R  R  *  *  *  W  R  I  H  S  R  F  T  D  L  P  S  Q  L  T  I  D  F  S  I  S  S  K  M  C  L  S  V  S  S  S  P  H  M  P  L :   Y  V  I  C  I  V  E  K  Y  L  M  W  R  S  G  M  K  L  K  L  V  T  I  L  A  L  :  M  W  K  L  R  E  *  M  K  *  R  K  R  G  R  V  S  G  R  L  T  H  L  S  S  L  S  S  I  F  V  L :   K  I  *  N  H  F  G  R  T  R  K  S  R  P  M  L  F  S  A  C  T  I  Y  R :   R  A  L  I  V  K  R  K  Q  G  G  Y  C  I  M  Y  Q  L  C   </first_frame>
            <second_frame>  E  R  E  Q  *  G  F  C  V  G  F  R  G  D  D  D  D  G  E  F  I  P  D  S  Q  T  C  R  V  N  S  P  S  T  S  R  F  R  Q  K  C  A  Y  R  Y  L  R  L  P  I  C  H   : C  M  *  Y  V  L  W  K  S  T  *  C  G  E  V  G  *  S  S  N  W  S  L  Y  W  H  * :   C  G  S  F  G  S  E  *  S  E  G  S  V  G  E  S  A  E  G  L  H  I  *  V  H  *  A  R  S  L  Y   : *  R  Y  R  I  I  L  E  G  Q  G  K  A  G  R  C  C  F  L  H  A  Q  F  T   : G  V  L  *  *  *  R  E  S  K  E  A  I  A  *  C  I  S  F  A  </second_frame>
            <third_frame>   N  E  S  S  R  V  F  V  W  V  L  E  A  M  M  M  M  A  N  S  F  P  I  H  R  P  A  E  S  T  H  H  R  L  L  D  F  V  K  N  V  L  I  G  I  F  V  S  P  Y  A  T  :  V  C  D  M  Y  C  G  K  V  P  D  V  E  K  W  D  E  A  Q  I  G  H  Y  I  G  I   : D  V  E  A  S  G  V  N  E  V  K  E  A  W  E  S  Q  R  K  A  Y  T  S  E  F  I  E  L  D  L  C  I  :  E  D  I  E  S  F  W  K  D  K  E  K  Q  A  D  V  V  F  C  M  H  N  L  Q  :  A  C  F  D  S  E  E  K  A  R  R  L  L  H  N  V  S  A  L  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0143O06.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85066" stop="84911"/>
                    <exon start="84610" stop="84532"/>
                    <exon start="83807" stop="83713"/>
                    <exon start="83136" stop="83065"/>
                    <exon start="82977" stop="82918"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>462</number_coding_nucleotides>
                  <number_encoded_amino_acids>154</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NESSRVFVWVLEAMMMMANSFPIHRPAESTHHRLLDFVKNVLIGIFVSPYATVCDMYCGKVPDVEKWDEAQIGHYIGIDVEASGVNEVKEAWESQRKAYTSEFIELDLCIEDIESFWKDKEKQADVVFCMHNLQACFDSEEKARRLLHNVSALL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="87759" PGL_stop="89355"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="87759" e_stop="87948"/>
            <exon e_start="88778" e_stop="89355"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.981" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="87759" e_stop="87948" e_length="190"/>
          </exon>
          <intron i_serial="1" don_prob="0.981" acc_prob="0.999">
            <gDNA_intron_boundary i_start="87949" i_stop="88777" i_length="829"/>
          </intron>
          <exon e_serial="2" e_score="0.995">
            <gDNA_exon_boundary e_start="88778" e_stop="89355" e_length="578"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87759" stop="87948"/>
              <exon start="88778" stop="89355"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U346942" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAGTTTTTCACTGATTTTGTAAAGGTTGCTCAAGATGAAGGGCGGCATTTTACTCTACTTGCAGCACGGCTTAAGGAACTAGGTTCATTCTATGGAGCTTTACCTGCTCATGATGGCCTGTGGGATTCAGCCATTGCTACTTCTAGCGATCTGTTGGCTCGTTTGGCTATTGAACACTGTGTTCATGAG : GCCAGAGGACTTGATGTGATTCCAACAACAATATCCCGTTTCCGCAATGGTGGTGATAGTGAAACAGCTGAGTTACTGGAGAATGTGGTGTATCCAGAAGAAATAACTCACTGCGCTGCAGGAGTCAAATGGTTCAAGTATCTTTGCGTAAGATCAAAAAATCCAAATCTGAGTGATATTCCTTCAGAAGAAACTAGTAATGTAGACAATGAAGTGATTCAAAAGTTCCATTCCACTGTGAGGACATATTTCAGAGGGCCATTGAAACCTCCTTTTAATGAGCAAGCAAGAAAAGCTGCTGGATTTGGTCCACAATGGTATGAACCTCTTGCTGTTAAAGATTTCACAGTAGTATGAAGGTCTCTCCTCGCTGGTAGAACGTTGTAGCAGATACCCTGCAGAATTAGTCGAGGTGTGCAAAAGTTGGCCCAAACATTACGGTTTATTCCAAAAACCAAAGCTCCTCCTCTGGTTTCTGTAAAACTATATTTCAAAATTTTCAGGATATTAAGCATAAATGGTACACTAGATTATTGAGGGGATTCTTCAAAATAGATCAACAACTATTTGTATCCTTG</gDNA_template>
            <first_frame> R  V  F  H  *  F  C  K  G  C  S  R  *  R  A  A  F  Y  S  T  C  S  T  A  *  G  T  R  F  I  L  W  S  F  T  C  S  *  W  P  V  G  F  S  H  C  Y  F  *  R  S  V  G  S  F  G  Y  *  T  L  C  S  *   : G  Q  R  T  *  C  D  S  N  N  N  I  P  F  P  Q  W  W  *  *  *  N  S  *  V  T  G  E  C  G  V  S  R  R  N  N  S  L  R  C  R  S  Q  M  V  Q  V  S  L  R  K  I  K  K  S  K  S  E  *  Y  S  F  R  R  N  *  *  C  R  Q  *  S  D  S  K  V  P  F  H  C  E  D  I  F  Q  R  A  I  E  T  S  F  *  *  A  S  K  K  S  C  W  I  W  S  T  M  V  *  T  S  C  C  *  R  F  H  S  S  M  K  V  S  P  R  W  *  N  V  V  A  D  T  L  Q  N  *  S  R  C  A  K  V  G  P  N  I  T  V  Y  S  K  N  Q  S  S  S  S  G  F  C  K  T  I  F  Q  N  F  Q  D  I  K  H  K  W  Y  T  R  L  L  R  G  F  F  K  I  D  Q  Q  L  F  V  S  L </first_frame>
            <second_frame>  E  F  F  T  D  F  V  K  V  A  Q  D  E  G  R  H  F  T  L  L  A  A  R  L  K  E  L  G  S  F  Y  G  A  L  P  A  H  D  G  L  W  D  S  A  I  A  T  S  S  D  L  L  A  R  L  A  I  E  H  C  V  H  E  :  A  R  G  L  D  V  I  P  T  T  I  S  R  F  R  N  G  G  D  S  E  T  A  E  L  L  E  N  V  V  Y  P  E  E  I  T  H  C  A  A  G  V  K  W  F  K  Y  L  C  V  R  S  K  N  P  N  L  S  D  I  P  S  E  E  T  S  N  V  D  N  E  V  I  Q  K  F  H  S  T  V  R  T  Y  F  R  G  P  L  K  P  P  F  N  E  Q  A  R  K  A  A  G  F  G  P  Q  W  Y  E  P  L  A  V  K  D  F  T  V  V  *  R  S  L  L  A  G  R  T  L  *  Q  I  P  C  R  I  S  R  G  V  Q  K  L  A  Q  T  L  R  F  I  P  K  T  K  A  P  P  L  V  S  V  K  L  Y  F  K  I  F  R  I  L  S  I  N  G  T  L  D  Y  *  G  D  S  S  K  *  I  N  N  Y  L  Y  P   </second_frame>
            <third_frame>   S  F  S  L  I  L  *  R  L  L  K  M  K  G  G  I  L  L  Y  L  Q  H  G  L  R  N  *  V  H  S  M  E  L  Y  L  L  M  M  A  C  G  I  Q  P  L  L  L  L  A  I  C  W  L  V  W  L  L  N  T  V  F  M  R :   P  E  D  L  M  *  F  Q  Q  Q  Y  P  V  S  A  M  V  V  I  V  K  Q  L  S  Y  W  R  M  W  C  I  Q  K  K  *  L  T  A  L  Q  E  S  N  G  S  S  I  F  A  *  D  Q  K  I  Q  I  *  V  I  F  L  Q  K  K  L  V  M  *  T  M  K  *  F  K  S  S  I  P  L  *  G  H  I  S  E  G  H  *  N  L  L  L  M  S  K  Q  E  K  L  L  D  L  V  H  N  G  M  N  L  L  L  L  K  I  S  Q  *  Y  E  G  L  S  S  L  V  E  R  C  S  R  Y  P  A  E  L  V  E  V  C  K  S  W  P  K  H  Y  G  L  F  Q  K  P  K  L  L  L  W  F  L  *  N  Y  I  S  K  F  S  G  Y  *  A  *  M  V  H  *  I  I  E  G  I  L  Q  N  R  S  T  T  I  C  I  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0143O06.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="87760" stop="87948"/>
                    <exon start="88778" stop="89134"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>543</number_coding_nucleotides>
                  <number_encoded_amino_acids>181</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EFFTDFVKVAQDEGRHFTLLAARLKELGSFYGALPAHDGLWDSAIATSSDLLARLAIEHCVHEARGLDVIPTTISRFRNGGDSETAELLENVVYPEEITHCAAGVKWFKYLCVRSKNPNLSDIPSEETSNVDNEVIQKFHSTVRTYFRGPLKPPFNEQARKAAGFGPQWYEPLAVKDFTVV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="106688" PGL_stop="89350"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="106688" e_stop="106504"/>
            <exon e_start="104830" e_stop="104780"/>
            <exon e_start="103536" e_stop="103488"/>
            <exon e_start="103411" e_stop="103378"/>
            <exon e_start="100996" e_stop="100947"/>
            <exon e_start="100846" e_stop="100802"/>
            <exon e_start="100665" e_stop="100592"/>
            <exon e_start="100350" e_stop="100281"/>
            <exon e_start="97191" e_stop="97000"/>
            <exon e_start="96900" e_stop="96856"/>
            <exon e_start="96743" e_stop="96670"/>
            <exon e_start="96231" e_stop="96162"/>
            <exon e_start="95942" e_stop="95541"/>
            <exon e_start="93878" e_stop="93818"/>
            <exon e_start="93641" e_stop="93597"/>
            <exon e_start="93512" e_stop="93429"/>
            <exon e_start="91216" e_stop="91140"/>
            <exon e_start="91068" e_stop="91006"/>
            <exon e_start="90722" e_stop="90652"/>
            <exon e_start="90569" e_stop="90509"/>
            <exon e_start="90247" e_stop="90187"/>
            <exon e_start="90041" e_stop="89961"/>
            <exon e_start="89865" e_stop="89350"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="0.989"/>
          <exon-intron don_prob="0.664" acc_prob="0.719" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.727" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.975" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.940" acc_prob="0.963" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.935" acc_prob="0.929" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.956" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.955" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.959" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.931" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.925" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.975" e_score="1.000"/>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="106688" e_stop="106504" e_length="185"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="106503" i_stop="104831" i_length="1673"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="104830" e_stop="104780" e_length="51"/>
          </exon>
          <intron i_serial="2" don_prob="0.664" acc_prob="0.719">
            <gDNA_intron_boundary i_start="104779" i_stop="103537" i_length="1243"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="103536" e_stop="103488" e_length="49"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="103487" i_stop="103412" i_length="76"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="103411" e_stop="103378" e_length="34"/>
          </exon>
          <intron i_serial="4" don_prob="0.727" acc_prob="0.999">
            <gDNA_intron_boundary i_start="103377" i_stop="100997" i_length="2381"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="100996" e_stop="100947" e_length="50"/>
          </exon>
          <intron i_serial="5" don_prob="0.975" acc_prob="0.999">
            <gDNA_intron_boundary i_start="100946" i_stop="100847" i_length="100"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="100846" e_stop="100802" e_length="45"/>
          </exon>
          <intron i_serial="6" don_prob="0.952" acc_prob="0.995">
            <gDNA_intron_boundary i_start="100801" i_stop="100666" i_length="136"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="100665" e_stop="100592" e_length="74"/>
          </exon>
          <intron i_serial="7" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="100591" i_stop="100351" i_length="241"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="100350" e_stop="100281" e_length="70"/>
          </exon>
          <intron i_serial="8" don_prob="0.993" acc_prob="0.999">
            <gDNA_intron_boundary i_start="100280" i_stop="97192" i_length="3089"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="97191" e_stop="97000" e_length="192"/>
          </exon>
          <intron i_serial="9" don_prob="0.940" acc_prob="0.963">
            <gDNA_intron_boundary i_start="96999" i_stop="96901" i_length="99"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="96900" e_stop="96856" e_length="45"/>
          </exon>
          <intron i_serial="10" don_prob="0.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="96855" i_stop="96744" i_length="112"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="96743" e_stop="96670" e_length="74"/>
          </exon>
          <intron i_serial="11" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="96669" i_stop="96232" i_length="438"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="96231" e_stop="96162" e_length="70"/>
          </exon>
          <intron i_serial="12" don_prob="1.000" acc_prob="0.990">
            <gDNA_intron_boundary i_start="96161" i_stop="95943" i_length="219"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="95942" e_stop="95541" e_length="402"/>
          </exon>
          <intron i_serial="13" don_prob="0.999" acc_prob="0.995">
            <gDNA_intron_boundary i_start="95540" i_stop="93879" i_length="1662"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="93878" e_stop="93818" e_length="61"/>
          </exon>
          <intron i_serial="14" don_prob="0.935" acc_prob="0.929">
            <gDNA_intron_boundary i_start="93817" i_stop="93642" i_length="176"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="93641" e_stop="93597" e_length="45"/>
          </exon>
          <intron i_serial="15" don_prob="0.988" acc_prob="0.956">
            <gDNA_intron_boundary i_start="93596" i_stop="93513" i_length="84"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="93512" e_stop="93429" e_length="84"/>
          </exon>
          <intron i_serial="16" don_prob="0.994" acc_prob="0.955">
            <gDNA_intron_boundary i_start="93428" i_stop="91217" i_length="2212"/>
          </intron>
          <exon e_serial="17" e_score="1.000">
            <gDNA_exon_boundary e_start="91216" e_stop="91140" e_length="77"/>
          </exon>
          <intron i_serial="17" don_prob="1.000" acc_prob="0.959">
            <gDNA_intron_boundary i_start="91139" i_stop="91069" i_length="71"/>
          </intron>
          <exon e_serial="18" e_score="1.000">
            <gDNA_exon_boundary e_start="91068" e_stop="91006" e_length="63"/>
          </exon>
          <intron i_serial="18" don_prob="0.952" acc_prob="0.990">
            <gDNA_intron_boundary i_start="91005" i_stop="90723" i_length="283"/>
          </intron>
          <exon e_serial="19" e_score="1.000">
            <gDNA_exon_boundary e_start="90722" e_stop="90652" e_length="71"/>
          </exon>
          <intron i_serial="19" don_prob="0.986" acc_prob="0.931">
            <gDNA_intron_boundary i_start="90651" i_stop="90570" i_length="82"/>
          </intron>
          <exon e_serial="20" e_score="1.000">
            <gDNA_exon_boundary e_start="90569" e_stop="90509" e_length="61"/>
          </exon>
          <intron i_serial="20" don_prob="0.973" acc_prob="0.925">
            <gDNA_intron_boundary i_start="90508" i_stop="90248" i_length="261"/>
          </intron>
          <exon e_serial="21" e_score="1.000">
            <gDNA_exon_boundary e_start="90247" e_stop="90187" e_length="61"/>
          </exon>
          <intron i_serial="21" don_prob="0.999" acc_prob="0.995">
            <gDNA_intron_boundary i_start="90186" i_stop="90042" i_length="145"/>
          </intron>
          <exon e_serial="22" e_score="1.000">
            <gDNA_exon_boundary e_start="90041" e_stop="89961" e_length="81"/>
          </exon>
          <intron i_serial="22" don_prob="0.987" acc_prob="0.975">
            <gDNA_intron_boundary i_start="89960" i_stop="89866" i_length="95"/>
          </intron>
          <exon e_serial="23" e_score="0.983">
            <gDNA_exon_boundary e_start="89865" e_stop="89350" e_length="516"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106688" stop="106504"/>
              <exon start="104830" stop="104780"/>
              <exon start="103536" stop="103488"/>
              <exon start="103411" stop="103378"/>
              <exon start="100996" stop="100947"/>
              <exon start="100846" stop="100802"/>
              <exon start="100665" stop="100592"/>
              <exon start="100350" stop="100281"/>
              <exon start="97191" stop="97000"/>
              <exon start="96900" stop="96856"/>
              <exon start="96743" stop="96670"/>
              <exon start="96231" stop="96162"/>
              <exon start="95942" stop="95541"/>
              <exon start="93878" stop="93818"/>
              <exon start="93641" stop="93597"/>
              <exon start="93512" stop="93429"/>
              <exon start="91216" stop="91140"/>
              <exon start="91068" stop="91006"/>
              <exon start="90722" stop="90652"/>
              <exon start="90569" stop="90509"/>
              <exon start="90247" stop="90187"/>
              <exon start="90041" stop="89961"/>
              <exon start="89865" stop="89350"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U316396" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATAGCGGAATAATAATAAGCATATAGAAGTTGAAGAAAGCAAAAGCGTGGTGGATCTGTGAATGATCGATGGCGCTCTCTCGACTTCGTCATCCGTTGATTTTCCGAGCTCCGTCGCTACTCCGAGCTCGCCGTCTTCTCGCCGCCGGTCCTTGTAACTCCTCCACACTCCGATCGCTCCATCA : TGTTCCTGGGGTGCTGAATCAAATTCCTGATGTGGATGCTTCTTCATTAAG : GCTTTTAAATTTCCGCCTGCTCAGTGAAGTACATGTCGTACCATCTAAG : CTACAAAGTGGTGTTCGGCACTTCTCGTCAGCTG : AGGCTCCTTCATATACAGAGGTGGGAATGCCAGCTTTGTCCCCTACAATG : ACTCAAGGTAATATAGCAAAATGGATAAAGAAAGAGGGGGACAAG : ATTCAAGCAGGGGATGTACTATGTTTGATAGAGACTGATAAAGCAACGCTTGAGTTTGAAACTCTTGAAGAAGG : TTTCCTTGCAAAGATATTGGTCCCTGAAGGAACAAAAGATGTACCGGTGGGACAGACTATAGCAATTACG : GTGGAAGAAGCAGATGACATACAAAAAGTCCCTGCTACCGTTGGTGGTGCATCAGAGGTTAAAAATCAAGCATCTTCTCAGACAGATGCAGCAAGGGGAGATGGGGCTACAGAAGTGAGTCCTGCGAATATCAGCTCATCTGAACTTCCTCCACATCTGATCCTTGATATGCCAGCTTTGTCCCCAACCATG : AACCAAGGTAACATTTTTAAATGGAGGAAAAAGGAAGGTGACAAG : ATAGAGGTTGGTGATGTTCTCTGTGAGATAGAAACTGACAAAGCAACTCTTGAGCATGAAAGTCTTGAAGAAGG : ATTCTTGGCCAAAATACTGGCACCTGAAGGTTCAAAAGATGTGGCTGTTGGGCAGCCTATTGCAATCATG : GTTGAGGATGAAAATGATATTGAAGCTGTGAGGACATCGATCAGCGGCAACAATGTGGTTAAGGAAGAAAAGCCGGTCAGTCATGATGTCACAACTGAAGTTAGAACTCAGACAACAGGTTTCAATAGAATCAGTCCAGCTGCTAAGGTATTAATTATGGAACATGGTTTAGATGCATCATCAATTCCAGCATCTGGTCCTCGTGGTACCTTGTTAAAGGGAGATGTTCTTGCTGCATTGAAGTCTGGAAAGGGATCAAGCAACAATTCATCAGTTGGGAAGGCAACTCCATCTCCTCCTCAGGTCAACCAACAAGCTACTCCAACAAAGTCACTTGATTTAAAATCTGATGGACAGCAAAAGGATGCTTATGAAGATTTACCCAATAGTCAAATTCGCAAG : GTGATAGCAGCAAGGTTATTGGAATCTAAGCAATCTACCCCTCACTTGTATTTGTCCACAG : ATGTTATATTGGACTCTCTTCTCTCCTTCAGAAAGGAGCTTAAAG : AAAAGTATGATGTTAAAGTCTCTGTGAATGACATTGTAATCAAAGTGGTTGCAGCAACATTAAGAAATGTACCAGGAGCAAATG : CTTACTGGGATGATGGAAAAGGTGAGGTGGTGCTTTGTGATTCTGTCGATATATCTGTTGCGGTTGCCACTGAAAAG : GGCTTGATGACCCCAATTATCAGGAATGCTGATCAAAAATCCATATCCTCAATATCTGCGGAG : ATCAAGGAGCTTGCTGGAAAGGCACGAGCTGGAAAGCTTAAACCTAATGAATTCCAAGGTGGCACTTTCAG : CATTTCAAACTTGGGCATGTTTCCAGTGGATCGGTTTTGTGCAATTATCAACCCTCCTCAG : GCCGGTATAATTGCTGTTGGTAGGGGCAATAAAGTTGTCGAACCTGTGGTTGGTGCTGACG : GAATTGAGAAACCAGCTGTTGTTAACAAGATGAGTTTGACATTATCAGCTGATCATCGCGTCTTTGATGGGAAGGTTGGAG : GTGCGTTCGTTTCAGCATTGTCATCTAACTTCAGTGACATCAAGAAGCTTCTACTTTAATACGGATGAAGTGTCTGGGAACAAAATATCCTACAGGACATGTCACCTGTGCAGGCGGCGTAGTTGTTTTTTCTGATGATAGTTTGCCTCTTTCAGATCTCAAGCTTGTATTAATGGTGCCATTTTTGTTCTTGAAGATAGAAATGATTTGAGGTCCATAAAATTGGACTAGTTCCAATACCAATGATACTACCATTTCTTCTGAGATGCCAAGTTTATGACACTTCACAGTTCCATCTGTTCTCCCTGTAAAGTTGTACAATAGGGGTGCCTCAATATTTTTTACCAAATAAAAAGCTGATTTTTTCCTCTCTTGCTCATATAATGTTTTTCCTTTACTTTTACAGACCATGTAACAGCTAAACCAAATTTCTTTTGTTTAATCACCAAAAGAAAATTATTGCTCAATACATATTAACTGATAAATATAAAACTCAATGATGAGAATTGACAAGGA</gDNA_template>
            <first_frame> H  S  G  I  I  I  S  I  *  K  L  K  K  A  K  A  W  W  I  C  E  *  S  M  A  L  S  R  L  R  H  P  L  I  F  R  A  P  S  L  L  R  A  R  R  L  L  A  A  G  P  C  N  S  S  T  L  R  S  L  H  H :   V  P  G  V  L  N  Q  I  P  D  V  D  A  S  S  L  R :   L  L  N  F  R  L  L  S  E  V  H  V  V  P  S  K  :  L  Q  S  G  V  R  H  F  S  S  A   : E  A  P  S  Y  T  E  V  G  M  P  A  L  S  P  T  M  :  T  Q  G  N  I  A  K  W  I  K  K  E  G  D  K  :  I  Q  A  G  D  V  L  C  L  I  E  T  D  K  A  T  L  E  F  E  T  L  E  E  G :   F  L  A  K  I  L  V  P  E  G  T  K  D  V  P  V  G  Q  T  I  A  I  T  :  V  E  E  A  D  D  I  Q  K  V  P  A  T  V  G  G  A  S  E  V  K  N  Q  A  S  S  Q  T  D  A  A  R  G  D  G  A  T  E  V  S  P  A  N  I  S  S  S  E  L  P  P  H  L  I  L  D  M  P  A  L  S  P  T  M  :  N  Q  G  N  I  F  K  W  R  K  K  E  G  D  K  :  I  E  V  G  D  V  L  C  E  I  E  T  D  K  A  T  L  E  H  E  S  L  E  E  G :   F  L  A  K  I  L  A  P  E  G  S  K  D  V  A  V  G  Q  P  I  A  I  M  :  V  E  D  E  N  D  I  E  A  V  R  T  S  I  S  G  N  N  V  V  K  E  E  K  P  V  S  H  D  V  T  T  E  V  R  T  Q  T  T  G  F  N  R  I  S  P  A  A  K  V  L  I  M  E  H  G  L  D  A  S  S  I  P  A  S  G  P  R  G  T  L  L  K  G  D  V  L  A  A  L  K  S  G  K  G  S  S  N  N  S  S  V  G  K  A  T  P  S  P  P  Q  V  N  Q  Q  A  T  P  T  K  S  L  D  L  K  S  D  G  Q  Q  K  D  A  Y  E  D  L  P  N  S  Q  I  R  K  :  V  I  A  A  R  L  L  E  S  K  Q  S  T  P  H  L  Y  L  S  T   : D  V  I  L  D  S  L  L  S  F  R  K  E  L  K   : E  K  Y  D  V  K  V  S  V  N  D  I  V  I  K  V  V  A  A  T  L  R  N  V  P  G  A  N   : A  Y  W  D  D  G  K  G  E  V  V  L  C  D  S  V  D  I  S  V  A  V  A  T  E  K  :  G  L  M  T  P  I  I  R  N  A  D  Q  K  S  I  S  S  I  S  A  E  :  I  K  E  L  A  G  K  A  R  A  G  K  L  K  P  N  E  F  Q  G  G  T  F  S :   I  S  N  L  G  M  F  P  V  D  R  F  C  A  I  I  N  P  P  Q  :  A  G  I  I  A  V  G  R  G  N  K  V  V  E  P  V  V  G  A  D   : G  I  E  K  P  A  V  V  N  K  M  S  L  T  L  S  A  D  H  R  V  F  D  G  K  V  G   : G  A  F  V  S  A  L  S  S  N  F  S  D  I  K  K  L  L  L  *  Y  G  *  S  V  W  E  Q  N  I  L  Q  D  M  S  P  V  Q  A  A  *  L  F  F  L  M  I  V  C  L  F  Q  I  S  S  L  Y  *  W  C  H  F  C  S  *  R  *  K  *  F  E  V  H  K  I  G  L  V  P  I  P  M  I  L  P  F  L  L  R  C  Q  V  Y  D  T  S  Q  F  H  L  F  S  L  *  S  C  T  I  G  V  P  Q  Y  F  L  P  N  K  K  L  I  F  S  S  L  A  H  I  M  F  F  L  Y  F  Y  R  P  C  N  S  *  T  K  F  L  L  F  N  H  Q  K  K  I  I  A  Q  Y  I  L  T  D  K  Y  K  T  Q  *  *  E  L  T  R  </first_frame>
            <second_frame>  I  A  E  *  *  *  A  Y  R  S  *  R  K  Q  K  R  G  G  S  V  N  D  R  W  R  S  L  D  F  V  I  R  *  F  S  E  L  R  R  Y  S  E  L  A  V  F  S  P  P  V  L  V  T  P  P  H  S  D  R  S  I   : M  F  L  G  C  *  I  K  F  L  M  W  M  L  L  H  *   : G  F  *  I  S  A  C  S  V  K  Y  M  S  Y  H  L  S :   Y  K  V  V  F  G  T  S  R  Q  L  :  R  L  L  H  I  Q  R  W  E  C  Q  L  C  P  L  Q  * :   L  K  V  I  *  Q  N  G  *  R  K  R  G  T  R :   F  K  Q  G  M  Y  Y  V  *  *  R  L  I  K  Q  R  L  S  L  K  L  L  K  K   : V  S  L  Q  R  Y  W  S  L  K  E  Q  K  M  Y  R  W  D  R  L  *  Q  L  R :   W  K  K  Q  M  T  Y  K  K  S  L  L  P  L  V  V  H  Q  R  L  K  I  K  H  L  L  R  Q  M  Q  Q  G  E  M  G  L  Q  K  *  V  L  R  I  S  A  H  L  N  F  L  H  I  *  S  L  I  C  Q  L  C  P  Q  P  * :   T  K  V  T  F  L  N  G  G  K  R  K  V  T  R :   *  R  L  V  M  F  S  V  R  *  K  L  T  K  Q  L  L  S  M  K  V  L  K  K   : D  S  W  P  K  Y  W  H  L  K  V  Q  K  M  W  L  L  G  S  L  L  Q  S  W :   L  R  M  K  M  I  L  K  L  *  G  H  R  S  A  A  T  M  W  L  R  K  K  S  R  S  V  M  M  S  Q  L  K  L  E  L  R  Q  Q  V  S  I  E  S  V  Q  L  L  R  Y  *  L  W  N  M  V  *  M  H  H  Q  F  Q  H  L  V  L  V  V  P  C  *  R  E  M  F  L  L  H  *  S  L  E  R  D  Q  A  T  I  H  Q  L  G  R  Q  L  H  L  L  L  R  S  T  N  K  L  L  Q  Q  S  H  L  I  *  N  L  M  D  S  K  R  M  L  M  K  I  Y  P  I  V  K  F  A  R :   *  *  Q  Q  G  Y  W  N  L  S  N  L  P  L  T  C  I  C  P  Q  :  M  L  Y  W  T  L  F  S  P  S  E  R  S  L  K  :  K  S  M  M  L  K  S  L  *  M  T  L  *  S  K  W  L  Q  Q  H  *  E  M  Y  Q  E  Q  M  :  L  T  G  M  M  E  K  V  R  W  C  F  V  I  L  S  I  Y  L  L  R  L  P  L  K  R :   A  *  *  P  Q  L  S  G  M  L  I  K  N  P  Y  P  Q  Y  L  R  R :   S  R  S  L  L  E  R  H  E  L  E  S  L  N  L  M  N  S  K  V  A  L  S   : A  F  Q  T  W  A  C  F  Q  W  I  G  F  V  Q  L  S  T  L  L  R :   P  V  *  L  L  L  V  G  A  I  K  L  S  N  L  W  L  V  L  T  :  E  L  R  N  Q  L  L  L  T  R  *  V  *  H  Y  Q  L  I  I  A  S  L  M  G  R  L  E  :  V  R  S  F  Q  H  C  H  L  T  S  V  T  S  R  S  F  Y  F  N  T  D  E  V  S  G  N  K  I  S  Y  R  T  C  H  L  C  R  R  R  S  C  F  F  *  *  *  F  A  S  F  R  S  Q  A  C  I  N  G  A  I  F  V  L  E  D  R  N  D  L  R  S  I  K  L  D  *  F  Q  Y  Q  *  Y  Y  H  F  F  *  D  A  K  F  M  T  L  H  S  S  I  C  S  P  C  K  V  V  Q  *  G  C  L  N  I  F  Y  Q  I  K  S  *  F  F  P  L  L  L  I  *  C  F  S  F  T  F  T  D  H  V  T  A  K  P  N  F  F  C  L  I  T  K  R  K  L  L  L  N  T  Y  *  L  I  N  I  K  L  N  D  E  N  *  Q  G </second_frame>
            <third_frame>   *  R  N  N  N  K  H  I  E  V  E  E  S  K  S  V  V  D  L  *  M  I  D  G  A  L  S  T  S  S  S  V  D  F  P  S  S  V  A  T  P  S  S  P  S  S  R  R  R  S  L  *  L  L  H  T  P  I  A  P  S  :  C  S  W  G  A  E  S  N  S  *  C  G  C  F  F  I  K  :  A  F  K  F  P  P  A  Q  *  S  T  C  R  T  I  *   : A  T  K  W  C  S  A  L  L  V  S  * :   G  S  F  I  Y  R  G  G  N  A  S  F  V  P  Y  N   : D  S  R  *  Y  S  K  M  D  K  E  R  G  G  Q   : D  S  S  R  G  C  T  M  F  D  R  D  *  *  S  N  A  *  V  *  N  S  *  R  R  :  F  P  C  K  D  I  G  P  *  R  N  K  R  C  T  G  G  T  D  Y  S  N  Y   : G  G  R  S  R  *  H  T  K  S  P  C  Y  R  W  W  C  I  R  G  *  K  S  S  I  F  S  D  R  C  S  K  G  R  W  G  Y  R  S  E  S  C  E  Y  Q  L  I  *  T  S  S  T  S  D  P  *  Y  A  S  F  V  P  N  H   : E  P  R  *  H  F  *  M  E  E  K  G  R  *  Q   : D  R  G  W  *  C  S  L  *  D  R  N  *  Q  S  N  S  *  A  *  K  S  *  R  R  :  I  L  G  Q  N  T  G  T  *  R  F  K  R  C  G  C  W  A  A  Y  C  N  H   : G  *  G  *  K  *  Y  *  S  C  E  D  I  D  Q  R  Q  Q  C  G  *  G  R  K  A  G  Q  S  *  C  H  N  *  S  *  N  S  D  N  R  F  Q  *  N  Q  S  S  C  *  G  I  N  Y  G  T  W  F  R  C  I  I  N  S  S  I  W  S  S  W  Y  L  V  K  G  R  C  S  C  C  I  E  V  W  K  G  I  K  Q  Q  F  I  S  W  E  G  N  S  I  S  S  S  G  Q  P  T  S  Y  S  N  K  V  T  *  F  K  I  *  W  T  A  K  G  C  L  *  R  F  T  Q  *  S  N  S  Q   : G  D  S  S  K  V  I  G  I  *  A  I  Y  P  S  L  V  F  V  H  R :   C  Y  I  G  L  S  S  L  L  Q  K  G  A  *  R :   K  V  *  C  *  S  L  C  E  *  H  C  N  Q  S  G  C  S  N  I  K  K  C  T  R  S  K  C :   L  L  G  *  W  K  R  *  G  G  A  L  *  F  C  R  Y  I  C  C  G  C  H  *  K   : G  L  D  D  P  N  Y  Q  E  C  *  S  K  I  H  I  L  N  I  C  G   : D  Q  G  A  C  W  K  G  T  S  W  K  A  *  T  *  *  I  P  R  W  H  F  Q  :  H  F  K  L  G  H  V  S  S  G  S  V  L  C  N  Y  Q  P  S  S   : G  R  Y  N  C  C  W  *  G  Q  *  S  C  R  T  C  G  W  C  *  R :   N  *  E  T  S  C  C  *  Q  D  E  F  D  I  I  S  *  S  S  R  L  *  W  E  G  W  R :   C  V  R  F  S  I  V  I  *  L  Q  *  H  Q  E  A  S  T  L  I  R  M  K  C  L  G  T  K  Y  P  T  G  H  V  T  C  A  G  G  V  V  V  F  S  D  D  S  L  P  L  S  D  L  K  L  V  L  M  V  P  F  L  F  L  K  I  E  M  I  *  G  P  *  N  W  T  S  S  N  T  N  D  T  T  I  S  S  E  M  P  S  L  *  H  F  T  V  P  S  V  L  P  V  K  L  Y  N  R  G  A  S  I  F  F  T  K  *  K  A  D  F  F  L  S  C  S  Y  N  V  F  P  L  L  L  Q  T  M  *  Q  L  N  Q  I  S  F  V  *  S  P  K  E  N  Y  C  S  I  H  I  N  *  *  I  *  N  S  M  M  R  I  D  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0143O06.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="106622" stop="106504"/>
                    <exon start="104830" stop="104780"/>
                    <exon start="103536" stop="103488"/>
                    <exon start="103411" stop="103378"/>
                    <exon start="100996" stop="100947"/>
                    <exon start="100846" stop="100802"/>
                    <exon start="100665" stop="100592"/>
                    <exon start="100350" stop="100281"/>
                    <exon start="97191" stop="97000"/>
                    <exon start="96900" stop="96856"/>
                    <exon start="96743" stop="96670"/>
                    <exon start="96231" stop="96162"/>
                    <exon start="95942" stop="95541"/>
                    <exon start="93878" stop="93818"/>
                    <exon start="93641" stop="93597"/>
                    <exon start="93512" stop="93429"/>
                    <exon start="91216" stop="91140"/>
                    <exon start="91068" stop="91006"/>
                    <exon start="90722" stop="90652"/>
                    <exon start="90569" stop="90509"/>
                    <exon start="90247" stop="90187"/>
                    <exon start="90041" stop="89961"/>
                    <exon start="89865" stop="89807"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1935</number_coding_nucleotides>
                  <number_encoded_amino_acids>645</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SMALSRLRHPLIFRAPSLLRARRLLAAGPCNSSTLRSLHHVPGVLNQIPDVDASSLRLLNFRLLSEVHVVPSKLQSGVRHFSSAEAPSYTEVGMPALSPTMTQGNIAKWIKKEGDKIQAGDVLCLIETDKATLEFETLEEGFLAKILVPEGTKDVPVGQTIAITVEEADDIQKVPATVGGASEVKNQASSQTDAARGDGATEVSPANISSSELPPHLILDMPALSPTMNQGNIFKWRKKEGDKIEVGDVLCEIETDKATLEHESLEEGFLAKILAPEGSKDVAVGQPIAIMVEDENDIEAVRTSISGNNVVKEEKPVSHDVTTEVRTQTTGFNRISPAAKVLIMEHGLDASSIPASGPRGTLLKGDVLAALKSGKGSSNNSSVGKATPSPPQVNQQATPTKSLDLKSDGQQKDAYEDLPNSQIRKVIAARLLESKQSTPHLYLSTDVILDSLLSFRKELKEKYDVKVSVNDIVIKVVAATLRNVPGANAYWDDGKGEVVLCDSVDISVAVATEKGLMTPIIRNADQKSISSISAEIKELAGKARAGKLKPNEFQGGTFSISNLGMFPVDRFCAIINPPQAGIIAVGRGNKVVEPVVGADGIEKPAVVNKMSLTLSADHRVFDGKVGGAFVSALSSNFSDIKKLLL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="96700" e_stop="96670"/>
            <exon e_start="96231" e_stop="96162"/>
            <exon e_start="95942" e_stop="95796"/>
            <exon e_start="95699" e_stop="95541"/>
            <exon e_start="93878" e_stop="93818"/>
            <exon e_start="93641" e_stop="93597"/>
            <exon e_start="93512" e_stop="93429"/>
            <exon e_start="91216" e_stop="91160"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.646" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.935" acc_prob="0.929" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.956" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.955" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="96700" e_stop="96670" e_length="31"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="96669" i_stop="96232" i_length="438"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="96231" e_stop="96162" e_length="70"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.990">
            <gDNA_intron_boundary i_start="96161" i_stop="95943" i_length="219"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="95942" e_stop="95796" e_length="147"/>
          </exon>
          <intron i_serial="3" don_prob="0.646" acc_prob="0.000">
            <gDNA_intron_boundary i_start="95795" i_stop="95700" i_length="96"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="95699" e_stop="95541" e_length="159"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.995">
            <gDNA_intron_boundary i_start="95540" i_stop="93879" i_length="1662"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="93878" e_stop="93818" e_length="61"/>
          </exon>
          <intron i_serial="5" don_prob="0.935" acc_prob="0.929">
            <gDNA_intron_boundary i_start="93817" i_stop="93642" i_length="176"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="93641" e_stop="93597" e_length="45"/>
          </exon>
          <intron i_serial="6" don_prob="0.988" acc_prob="0.956">
            <gDNA_intron_boundary i_start="93596" i_stop="93513" i_length="84"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="93512" e_stop="93429" e_length="84"/>
          </exon>
          <intron i_serial="7" don_prob="0.994" acc_prob="0.955">
            <gDNA_intron_boundary i_start="93428" i_stop="91217" i_length="2212"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="91216" e_stop="91160" e_length="57"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96700" stop="96670"/>
              <exon start="96231" stop="96162"/>
              <exon start="95942" stop="95796"/>
              <exon start="95699" stop="95541"/>
              <exon start="93878" stop="93818"/>
              <exon start="93641" stop="93597"/>
              <exon start="93512" stop="93429"/>
              <exon start="91216" stop="91160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U316395" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAACTCTTGAGCATGAAAGTCTTGAAGAAGG : ATTCTTGGCCAAAATACTGGCACCTGAAGGTTCAAAAGATGTGGCTGTTGGGCAGCCTATTGCAATCATG : GTTGAGGATGAAAATGATATTGAAGCTGTGAGGACATCGATCAGCGGCAACAATGTGGTTAAGGAAGAAAAGCCGGTCAGTCATGATGTCACAACTGAAGTTAGAACTCAGACAACAGGTTTCAATAGAATCAGTCCAGCTGCTAAG : TCTGGAAAGGGATCAAGCAACAATTCATCAGTTGGGAAGGCAACTCCATCTCCTCCTCAGGTCAACCAACAAGCTACTCCAACAAAGTCACTTGATTTAAAATCTGATGGACAGCAAAAGGATGCTTATGAAGATTTACCCAATAGTCAAATTCGCAAG : GTGATAGCAGCAAGGTTATTGGAATCTAAGCAATCTACCCCTCACTTGTATTTGTCCACAG : ATGTTATATTGGACTCTCTTCTCTCCTTCAGAAAGGAGCTTAAAG : AAAAGTATGATGTTAAAGTCTCTGTGAATGACATTGTAATCAAAGTGGTTGCAGCAACATTAAGAAATGTACCAGGAGCAAATG : CTTACTGGGATGATGGAAAAGGTGAGGTGGTGCTTTGTGATTCTGTCGATATATCTG</gDNA_template>
            <first_frame> Q  L  L  S  M  K  V  L  K  K   : D  S  W  P  K  Y  W  H  L  K  V  Q  K  M  W  L  L  G  S  L  L  Q  S  W :   L  R  M  K  M  I  L  K  L  *  G  H  R  S  A  A  T  M  W  L  R  K  K  S  R  S  V  M  M  S  Q  L  K  L  E  L  R  Q  Q  V  S  I  E  S  V  Q  L  L  S :   L  E  R  D  Q  A  T  I  H  Q  L  G  R  Q  L  H  L  L  L  R  S  T  N  K  L  L  Q  Q  S  H  L  I  *  N  L  M  D  S  K  R  M  L  M  K  I  Y  P  I  V  K  F  A  R :   *  *  Q  Q  G  Y  W  N  L  S  N  L  P  L  T  C  I  C  P  Q  :  M  L  Y  W  T  L  F  S  P  S  E  R  S  L  K  :  K  S  M  M  L  K  S  L  *  M  T  L  *  S  K  W  L  Q  Q  H  *  E  M  Y  Q  E  Q  M  :  L  T  G  M  M  E  K  V  R  W  C  F  V  I  L  S  I  Y  L </first_frame>
            <second_frame>  N  S  *  A  *  K  S  *  R  R  :  I  L  G  Q  N  T  G  T  *  R  F  K  R  C  G  C  W  A  A  Y  C  N  H   : G  *  G  *  K  *  Y  *  S  C  E  D  I  D  Q  R  Q  Q  C  G  *  G  R  K  A  G  Q  S  *  C  H  N  *  S  *  N  S  D  N  R  F  Q  *  N  Q  S  S  C  *   : V  W  K  G  I  K  Q  Q  F  I  S  W  E  G  N  S  I  S  S  S  G  Q  P  T  S  Y  S  N  K  V  T  *  F  K  I  *  W  T  A  K  G  C  L  *  R  F  T  Q  *  S  N  S  Q   : G  D  S  S  K  V  I  G  I  *  A  I  Y  P  S  L  V  F  V  H  R :   C  Y  I  G  L  S  S  L  L  Q  K  G  A  *  R :   K  V  *  C  *  S  L  C  E  *  H  C  N  Q  S  G  C  S  N  I  K  K  C  T  R  S  K  C :   L  L  G  *  W  K  R  *  G  G  A  L  *  F  C  R  Y  I   </second_frame>
            <third_frame>   T  L  E  H  E  S  L  E  E  G :   F  L  A  K  I  L  A  P  E  G  S  K  D  V  A  V  G  Q  P  I  A  I  M  :  V  E  D  E  N  D  I  E  A  V  R  T  S  I  S  G  N  N  V  V  K  E  E  K  P  V  S  H  D  V  T  T  E  V  R  T  Q  T  T  G  F  N  R  I  S  P  A  A  K  :  S  G  K  G  S  S  N  N  S  S  V  G  K  A  T  P  S  P  P  Q  V  N  Q  Q  A  T  P  T  K  S  L  D  L  K  S  D  G  Q  Q  K  D  A  Y  E  D  L  P  N  S  Q  I  R  K  :  V  I  A  A  R  L  L  E  S  K  Q  S  T  P  H  L  Y  L  S  T   : D  V  I  L  D  S  L  L  S  F  R  K  E  L  K   : E  K  Y  D  V  K  V  S  V  N  D  I  V  I  K  V  V  A  A  T  L  R  N  V  P  G  A  N   : A  Y  W  D  D  G  K  G  E  V  V  L  C  D  S  V  D  I  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0143O06.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="96698" stop="96670"/>
                    <exon start="96231" stop="96162"/>
                    <exon start="95942" stop="95796"/>
                    <exon start="95699" stop="95541"/>
                    <exon start="93878" stop="93818"/>
                    <exon start="93641" stop="93597"/>
                    <exon start="93512" stop="93429"/>
                    <exon start="91216" stop="91161"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>651</number_coding_nucleotides>
                  <number_encoded_amino_acids>217</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TLEHESLEEGFLAKILAPEGSKDVAVGQPIAIMVEDENDIEAVRTSISGNNVVKEEKPVSHDVTTEVRTQTTGFNRISPAAKSGKGSSNNSSVGKATPSPPQVNQQATPTKSLDLKSDGQQKDAYEDLPNSQIRKVIAARLLESKQSTPHLYLSTDVILDSLLSFRKELKEKYDVKVSVNDIVIKVVAATLRNVPGANAYWDDGKGEVVLCDSVDIS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="106622" e_stop="106504"/>
            <exon e_start="104830" e_stop="104780"/>
            <exon e_start="103536" e_stop="103488"/>
            <exon e_start="100996" e_stop="100947"/>
            <exon e_start="100846" e_stop="100802"/>
            <exon e_start="100677" e_stop="100592"/>
            <exon e_start="100350" e_stop="100281"/>
            <exon e_start="97191" e_stop="97043"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="0.992"/>
          <exon-intron don_prob="0.664" acc_prob="0.719" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="0.959"/>
          <exon-intron don_prob="0.975" acc_prob="0.999" e_score="0.980"/>
          <exon-intron don_prob="0.952" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="0.965"/>
          <exon-intron don_prob="0.993" acc_prob="0.999" e_score="0.986"/>
          <exon-only e_score="0.953"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="106622" e_stop="106504" e_length="119"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="106503" i_stop="104831" i_length="1673"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="104830" e_stop="104780" e_length="51"/>
          </exon>
          <intron i_serial="2" don_prob="0.664" acc_prob="0.719">
            <gDNA_intron_boundary i_start="104779" i_stop="103537" i_length="1243"/>
          </intron>
          <exon e_serial="3" e_score="0.959">
            <gDNA_exon_boundary e_start="103536" e_stop="103488" e_length="49"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="103487" i_stop="100997" i_length="2491"/>
          </intron>
          <exon e_serial="4" e_score="0.980">
            <gDNA_exon_boundary e_start="100996" e_stop="100947" e_length="50"/>
          </exon>
          <intron i_serial="4" don_prob="0.975" acc_prob="0.999">
            <gDNA_intron_boundary i_start="100946" i_stop="100847" i_length="100"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="100846" e_stop="100802" e_length="45"/>
          </exon>
          <intron i_serial="5" don_prob="0.952" acc_prob="0.000">
            <gDNA_intron_boundary i_start="100801" i_stop="100678" i_length="124"/>
          </intron>
          <exon e_serial="6" e_score="0.965">
            <gDNA_exon_boundary e_start="100677" e_stop="100592" e_length="86"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="100591" i_stop="100351" i_length="241"/>
          </intron>
          <exon e_serial="7" e_score="0.986">
            <gDNA_exon_boundary e_start="100350" e_stop="100281" e_length="70"/>
          </exon>
          <intron i_serial="7" don_prob="0.993" acc_prob="0.999">
            <gDNA_intron_boundary i_start="100280" i_stop="97192" i_length="3089"/>
          </intron>
          <exon e_serial="8" e_score="0.953">
            <gDNA_exon_boundary e_start="97191" e_stop="97043" e_length="149"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106622" stop="106504"/>
              <exon start="104830" stop="104780"/>
              <exon start="103536" stop="103488"/>
              <exon start="100996" stop="100947"/>
              <exon start="100846" stop="100802"/>
              <exon start="100677" stop="100592"/>
              <exon start="100350" stop="100281"/>
              <exon start="97191" stop="97043"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335647" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCGATGGCGCTCTCTCGACTTCGTCATCCGTTGATTTTCCGAGCTCCGTCGCTACTCCGAGCTCGCCGTCTTCTCGCCGCCGGTCCTTGTAACTCCTCCACACTCCGATCGCTCCATCA : TGTTCCTGGGGTGCTGAATCAAATTCCTGATGTGGATGCTTCTTCATTAAG : GCTTTTAAATTTCCGCCTGCTCAGTGAAGTACATGTCGTACCATCTAAG : AGGCTCCTTCATATACAGAGGTGGGAATGCCAGCTTTGTCCCCTACAATG : ACTCAAGGTAATATAGCAAAATGGATAAAGAAAGAGGGGGACAAG : ATTTCCTAACAGATTCAAGCAGGGGATGTACTATGTTTGATAGAGACTGATAAAGCAACGCTTGAGTTTGAAACTCTTGAAGAAGG : TTTCCTTGCAAAGATATTGGTCCCTGAAGGAACAAAAGATGTACCGGTGGGACAGACTATAGCAATTACG : GTGGAAGAAGCAGATGACATACAAAAAGTCCCTGCTACCGTTGGTGGTGCATCAGAGGTTAAAAATCAAGCATCTTCTCAGACAGATGCAGCAAGGGGAGATGGGGCTACAGAAGTGAGTCCTGCGAATATCAGCTCATCTGAACTTCC</gDNA_template>
            <first_frame> S  M  A  L  S  R  L  R  H  P  L  I  F  R  A  P  S  L  L  R  A  R  R  L  L  A  A  G  P  C  N  S  S  T  L  R  S  L  H  H :   V  P  G  V  L  N  Q  I  P  D  V  D  A  S  S  L  R :   L  L  N  F  R  L  L  S  E  V  H  V  V  P  S  K  :  R  L  L  H  I  Q  R  W  E  C  Q  L  C  P  L  Q  * :   L  K  V  I  *  Q  N  G  *  R  K  R  G  T  R :   F  P  N  R  F  K  Q  G  M  Y  Y  V  *  *  R  L  I  K  Q  R  L  S  L  K  L  L  K  K   : V  S  L  Q  R  Y  W  S  L  K  E  Q  K  M  Y  R  W  D  R  L  *  Q  L  R :   W  K  K  Q  M  T  Y  K  K  S  L  L  P  L  V  V  H  Q  R  L  K  I  K  H  L  L  R  Q  M  Q  Q  G  E  M  G  L  Q  K  *  V  L  R  I  S  A  H  L  N  F  </first_frame>
            <second_frame>  R  W  R  S  L  D  F  V  I  R  *  F  S  E  L  R  R  Y  S  E  L  A  V  F  S  P  P  V  L  V  T  P  P  H  S  D  R  S  I   : M  F  L  G  C  *  I  K  F  L  M  W  M  L  L  H  *   : G  F  *  I  S  A  C  S  V  K  Y  M  S  Y  H  L  R :   G  S  F  I  Y  R  G  G  N  A  S  F  V  P  Y  N   : D  S  R  *  Y  S  K  M  D  K  E  R  G  G  Q   : D  F  L  T  D  S  S  R  G  C  T  M  F  D  R  D  *  *  S  N  A  *  V  *  N  S  *  R  R  :  F  P  C  K  D  I  G  P  *  R  N  K  R  C  T  G  G  T  D  Y  S  N  Y   : G  G  R  S  R  *  H  T  K  S  P  C  Y  R  W  W  C  I  R  G  *  K  S  S  I  F  S  D  R  C  S  K  G  R  W  G  Y  R  S  E  S  C  E  Y  Q  L  I  *  T  S </second_frame>
            <third_frame>   D  G  A  L  S  T  S  S  S  V  D  F  P  S  S  V  A  T  P  S  S  P  S  S  R  R  R  S  L  *  L  L  H  T  P  I  A  P  S  :  C  S  W  G  A  E  S  N  S  *  C  G  C  F  F  I  K  :  A  F  K  F  P  P  A  Q  *  S  T  C  R  T  I  *   : E  A  P  S  Y  T  E  V  G  M  P  A  L  S  P  T  M  :  T  Q  G  N  I  A  K  W  I  K  K  E  G  D  K  :  I  S  *  Q  I  Q  A  G  D  V  L  C  L  I  E  T  D  K  A  T  L  E  F  E  T  L  E  E  G :   F  L  A  K  I  L  V  P  E  G  T  K  D  V  P  V  G  Q  T  I  A  I  T  :  V  E  E  A  D  D  I  Q  K  V  P  A  T  V  G  G  A  S  E  V  K  N  Q  A  S  S  Q  T  D  A  A  R  G  D  G  A  T  E  V  S  P  A  N  I  S  S  S  E  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0143O06.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100668" stop="100592"/>
                    <exon start="100350" stop="100281"/>
                    <exon start="97191" stop="97045"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>294</number_coding_nucleotides>
                  <number_encoded_amino_acids>98</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QIQAGDVLCLIETDKATLEFETLEEGFLAKILVPEGTKDVPVGQTIAITVEEADDIQKVPATVGGASEVKNQASSQTDAARGDGATEVSPANISSSEL</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0143O06.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="106622" stop="106504"/>
                    <exon start="104830" stop="104780"/>
                    <exon start="103536" stop="103488"/>
                    <exon start="100996" stop="100846"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>267</number_coding_nucleotides>
                  <number_encoded_amino_acids>89</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SMALSRLRHPLIFRAPSLLRARRLLAAGPCNSSTLRSLHHVPGVLNQIPDVDASSLRLLNFRLLSEVHVVPSKRLLHIQRWECQLCPLQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="111939" PGL_stop="106697"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="111939" e_stop="111530"/>
            <exon e_start="111435" e_stop="111368"/>
            <exon e_start="111023" e_stop="110868"/>
            <exon e_start="110490" e_stop="110284"/>
            <exon e_start="109542" e_stop="109363"/>
            <exon e_start="109092" e_stop="108774"/>
            <exon e_start="106714" e_stop="106697"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.567" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.938" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="0.722"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="111939" e_stop="111530" e_length="410"/>
          </exon>
          <intron i_serial="1" don_prob="0.567" acc_prob="0.997">
            <gDNA_intron_boundary i_start="111529" i_stop="111436" i_length="94"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="111435" e_stop="111368" e_length="68"/>
          </exon>
          <intron i_serial="2" don_prob="0.980" acc_prob="1.000">
            <gDNA_intron_boundary i_start="111367" i_stop="111024" i_length="344"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="111023" e_stop="110868" e_length="156"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.991">
            <gDNA_intron_boundary i_start="110867" i_stop="110491" i_length="377"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="110490" e_stop="110284" e_length="207"/>
          </exon>
          <intron i_serial="4" don_prob="0.938" acc_prob="0.996">
            <gDNA_intron_boundary i_start="110283" i_stop="109543" i_length="741"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="109542" e_stop="109363" e_length="180"/>
          </exon>
          <intron i_serial="5" don_prob="0.989" acc_prob="0.969">
            <gDNA_intron_boundary i_start="109362" i_stop="109093" i_length="270"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="109092" e_stop="108774" e_length="319"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="108773" i_stop="106715" i_length="2059"/>
          </intron>
          <exon e_serial="7" e_score="0.722">
            <gDNA_exon_boundary e_start="106714" e_stop="106697" e_length="18"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111939" stop="111530"/>
              <exon start="111435" stop="111368"/>
              <exon start="111023" stop="110868"/>
              <exon start="110490" stop="110284"/>
              <exon start="109542" stop="109363"/>
              <exon start="109092" stop="108774"/>
              <exon start="106714" stop="106697"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U322022" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAAATTGTAATGTAGACCGTCTTCCTGATGAATACGAAAAATTCCGACTCCAACCCTACTTCCATTAGAAAATTGATAAACCTTTTGTGTAATTTTTTTGTTATATATAACTCAACATTGTTAAGCCTAAAATTATGGACAAAACTTGTTGCAGTTCAATAAAAAATGGCTGCAAAACAAGTTGTCCTTCTATTTACTCTTATATTGGCTTTGGGATTTATCCCTTTTCTTGTATTTTCTGCACAAGCAATTCCATTTGAAAGATTTGAATCTTTAAGAGTTGTCAAAAAAGTTAATAAAAATGGTCCTTTTCTTGGACTTATCACAGTGTATGCACCAGAAGAAGAAGCTTTCTTTAAAACTGGTGTTTTTAGGCCTGATCCTAGACACCCCTTTGTTGACTTATCAG : GTAGACGATTTCGAATTGGGAAAGTTGAGGGCAAAAAAGTCATTTATGTGAAATGTGGAGTTGGATTG : GTGAATGCAGCAGCAGCAACACAACAGATGTTGGACTTGTTTGACATAAAAGGGATAATTCATTTTGGCATCTCTGGTAATGCTAACAGTTCTATGCAAATTGGAGATGTCACAATCCCAGGGCAGCTTGCACAAGCAGGGCTTTGGGATTGGCTG : AAACCAAATGCAACTATGGAACCAAATGATTTTGCTCAATTTAATTTCAAGAGCTACAATGATCCTAAAGGAGGGGAAAATCAGTTGGGAAAAGTAGGATATAGCACTGAACAGTTTTACTCAGTTGCAGGGGAAGTCAATGTGCCTCAAAGACCAGTTTGGTTTAACATAACCAACAATTGGCTTCATTTAGCCTCTCATTTGCAT : GGGATAAATCTTGATCAATGTGCAAATTCAACGTTGTGTCTACCAGAAAAGCCAAAACTAGTTGTTGGATTGAAGGGAGCTACTTCAAATTTTTTCATTGACAATGCAGCTTACACACAATTCCTTTTCAATACTTTTGGTGTCACATCACTTGACATGGAAAGTTCAGCTGTAGTAATG : ACATGTTTGTCAAATGGATATCCAGTTATTGCAATTCGTGGATTATCGGATTTAGCAGGAACACAAAAAGGGGATAACACAATAAGATTATTTGGCTCTTTAGCTGCTCTAAATACAGCAAAAGTTGTAATTGATTTTGTTAAGTCACTCCCGATAAATCACGTTTCGCAATTCTAGCTAAAATATTATCGGAGATGAATTTAGAGCAGGTTCTATAAGTTTCAACTAAACTTATTAATATTGCTCCAATTATGTATTTGTACGCATAAAAATATTTCAATGTATACGTATAATAAGATCACACGCTTATTATGAATCA : CGAAAAAAAAAAAGAGGA</gDNA_template>
            <first_frame> K  N  C  N  V  D  R  L  P  D  E  Y  E  K  F  R  L  Q  P  Y  F  H  *  K  I  D  K  P  F  V  *  F  F  C  Y  I  *  L  N  I  V  K  P  K  I  M  D  K  T  C  C  S  S  I  K  N  G  C  K  T  S  C  P  S  I  Y  S  Y  I  G  F  G  I  Y  P  F  S  C  I  F  C  T  S  N  S  I  *  K  I  *  I  F  K  S  C  Q  K  S  *  *  K  W  S  F  S  W  T  Y  H  S  V  C  T  R  R  R  S  F  L  *  N  W  C  F  *  A  *  S  *  T  P  L  C  *  L  I  R :   *  T  I  S  N  W  E  S  *  G  Q  K  S  H  L  C  E  M  W  S  W  I   : G  E  C  S  S  S  N  T  T  D  V  G  L  V  *  H  K  R  D  N  S  F  W  H  L  W  *  C  *  Q  F  Y  A  N  W  R  C  H  N  P  R  A  A  C  T  S  R  A  L  G  L  A   : E  T  K  C  N  Y  G  T  K  *  F  C  S  I  *  F  Q  E  L  Q  *  S  *  R  R  G  K  S  V  G  K  S  R  I  *  H  *  T  V  L  L  S  C  R  G  S  Q  C  A  S  K  T  S  L  V  *  H  N  Q  Q  L  A  S  F  S  L  S  F  A   : W  D  K  S  *  S  M  C  K  F  N  V  V  S  T  R  K  A  K  T  S  C  W  I  E  G  S  Y  F  K  F  F  H  *  Q  C  S  L  H  T  I  P  F  Q  Y  F  W  C  H  I  T  *  H  G  K  F  S  C  S  N   : D  M  F  V  K  W  I  S  S  Y  C  N  S  W  I  I  G  F  S  R  N  T  K  R  G  *  H  N  K  I  I  W  L  F  S  C  S  K  Y  S  K  S  C  N  *  F  C  *  V  T  P  D  K  S  R  F  A  I  L  A  K  I  L  S  E  M  N  L  E  Q  V  L  *  V  S  T  K  L  I  N  I  A  P  I  M  Y  L  Y  A  *  K  Y  F  N  V  Y  V  *  *  D  H  T  L  I  M  N  H :   E  K  K  K  E   </first_frame>
            <second_frame>  K  I  V  M  *  T  V  F  L  M  N  T  K  N  S  D  S  N  P  T  S  I  R  K  L  I  N  L  L  C  N  F  F  V  I  Y  N  S  T  L  L  S  L  K  L  W  T  K  L  V  A  V  Q  *  K  M  A  A  K  Q  V  V  L  L  F  T  L  I  L  A  L  G  F  I  P  F  L  V  F  S  A  Q  A  I  P  F  E  R  F  E  S  L  R  V  V  K  K  V  N  K  N  G  P  F  L  G  L  I  T  V  Y  A  P  E  E  E  A  F  F  K  T  G  V  F  R  P  D  P  R  H  P  F  V  D  L  S   : G  R  R  F  R  I  G  K  V  E  G  K  K  V  I  Y  V  K  C  G  V  G  L  :  V  N  A  A  A  A  T  Q  Q  M  L  D  L  F  D  I  K  G  I  I  H  F  G  I  S  G  N  A  N  S  S  M  Q  I  G  D  V  T  I  P  G  Q  L  A  Q  A  G  L  W  D  W  L  :  K  P  N  A  T  M  E  P  N  D  F  A  Q  F  N  F  K  S  Y  N  D  P  K  G  G  E  N  Q  L  G  K  V  G  Y  S  T  E  Q  F  Y  S  V  A  G  E  V  N  V  P  Q  R  P  V  W  F  N  I  T  N  N  W  L  H  L  A  S  H  L  H  :  G  I  N  L  D  Q  C  A  N  S  T  L  C  L  P  E  K  P  K  L  V  V  G  L  K  G  A  T  S  N  F  F  I  D  N  A  A  Y  T  Q  F  L  F  N  T  F  G  V  T  S  L  D  M  E  S  S  A  V  V  M  :  T  C  L  S  N  G  Y  P  V  I  A  I  R  G  L  S  D  L  A  G  T  Q  K  G  D  N  T  I  R  L  F  G  S  L  A  A  L  N  T  A  K  V  V  I  D  F  V  K  S  L  P  I  N  H  V  S  Q  F  *  L  K  Y  Y  R  R  *  I  *  S  R  F  Y  K  F  Q  L  N  L  L  I  L  L  Q  L  C  I  C  T  H  K  N  I  S  M  Y  T  Y  N  K  I  T  R  L  L  *  I   : T  K  K  K  K  R  </second_frame>
            <third_frame>   K  L  *  C  R  P  S  S  *  *  I  R  K  I  P  T  P  T  L  L  P  L  E  N  *  *  T  F  C  V  I  F  L  L  Y  I  T  Q  H  C  *  A  *  N  Y  G  Q  N  L  L  Q  F  N  K  K  W  L  Q  N  K  L  S  F  Y  L  L  L  Y  W  L  W  D  L  S  L  F  L  Y  F  L  H  K  Q  F  H  L  K  D  L  N  L  *  E  L  S  K  K  L  I  K  M  V  L  F  L  D  L  S  Q  C  M  H  Q  K  K  K  L  S  L  K  L  V  F  L  G  L  I  L  D  T  P  L  L  T  Y  Q  :  V  D  D  F  E  L  G  K  L  R  A  K  K  S  F  M  *  N  V  E  L  D  W :   *  M  Q  Q  Q  Q  H  N  R  C  W  T  C  L  T  *  K  G  *  F  I  L  A  S  L  V  M  L  T  V  L  C  K  L  E  M  S  Q  S  Q  G  S  L  H  K  Q  G  F  G  I  G  * :   N  Q  M  Q  L  W  N  Q  M  I  L  L  N  L  I  S  R  A  T  M  I  L  K  E  G  K  I  S  W  E  K  *  D  I  A  L  N  S  F  T  Q  L  Q  G  K  S  M  C  L  K  D  Q  F  G  L  T  *  P  T  I  G  F  I  *  P  L  I  C  M :   G  *  I  L  I  N  V  Q  I  Q  R  C  V  Y  Q  K  S  Q  N  *  L  L  D  *  R  E  L  L  Q  I  F  S  L  T  M  Q  L  T  H  N  S  F  S  I  L  L  V  S  H  H  L  T  W  K  V  Q  L  *  *  * :   H  V  C  Q  M  D  I  Q  L  L  Q  F  V  D  Y  R  I  *  Q  E  H  K  K  G  I  T  Q  *  D  Y  L  A  L  *  L  L  *  I  Q  Q  K  L  *  L  I  L  L  S  H  S  R  *  I  T  F  R  N  S  S  *  N  I  I  G  D  E  F  R  A  G  S  I  S  F  N  *  T  Y  *  Y  C  S  N  Y  V  F  V  R  I  K  I  F  Q  C  I  R  I  I  R  S  H  A  Y  Y  E  S  :  R  K  K  K  R  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0143O06.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="111776" stop="111530"/>
                    <exon start="111435" stop="111368"/>
                    <exon start="111023" stop="110868"/>
                    <exon start="110490" stop="110284"/>
                    <exon start="109542" stop="109363"/>
                    <exon start="109092" stop="108916"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1032</number_coding_nucleotides>
                  <number_encoded_amino_acids>344</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KMAAKQVVLLFTLILALGFIPFLVFSAQAIPFERFESLRVVKKVNKNGPFLGLITVYAPEEEAFFKTGVFRPDPRHPFVDLSGRRFRIGKVEGKKVIYVKCGVGLVNAAAATQQMLDLFDIKGIIHFGISGNANSSMQIGDVTIPGQLAQAGLWDWLKPNATMEPNDFAQFNFKSYNDPKGGENQLGKVGYSTEQFYSVAGEVNVPQRPVWFNITNNWLHLASHLHGINLDQCANSTLCLPEKPKLVVGLKGATSNFFIDNAAYTQFLFNTFGVTSLDMESSAVVMTCLSNGYPVIAIRGLSDLAGTQKGDNTIRLFGSLAALNTAKVVIDFVKSLPINHVSQF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="113722" PGL_stop="118410"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="113722" e_stop="113915"/>
            <exon e_start="115069" e_stop="115221"/>
            <exon e_start="115307" e_stop="115422"/>
            <exon e_start="115605" e_stop="115696"/>
            <exon e_start="116097" e_stop="116118"/>
            <exon e_start="116187" e_stop="116255"/>
            <exon e_start="117818" e_stop="117916"/>
            <exon e_start="118028" e_stop="118410"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.379" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.887" acc_prob="0.874" e_score="1.000"/>
          <exon-intron don_prob="0.962" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.956" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.966" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="113722" e_stop="113915" e_length="194"/>
          </exon>
          <intron i_serial="1" don_prob="0.379" acc_prob="1.000">
            <gDNA_intron_boundary i_start="113916" i_stop="115068" i_length="1153"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="115069" e_stop="115221" e_length="153"/>
          </exon>
          <intron i_serial="2" don_prob="0.887" acc_prob="0.874">
            <gDNA_intron_boundary i_start="115222" i_stop="115306" i_length="85"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="115307" e_stop="115422" e_length="116"/>
          </exon>
          <intron i_serial="3" don_prob="0.962" acc_prob="0.995">
            <gDNA_intron_boundary i_start="115423" i_stop="115604" i_length="182"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="115605" e_stop="115696" e_length="92"/>
          </exon>
          <intron i_serial="4" don_prob="0.956" acc_prob="0.000">
            <gDNA_intron_boundary i_start="115697" i_stop="116096" i_length="400"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="116097" e_stop="116118" e_length="22"/>
          </exon>
          <intron i_serial="5" don_prob="0.900" acc_prob="0.991">
            <gDNA_intron_boundary i_start="116119" i_stop="116186" i_length="68"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="116187" e_stop="116255" e_length="69"/>
          </exon>
          <intron i_serial="6" don_prob="0.997" acc_prob="0.999">
            <gDNA_intron_boundary i_start="116256" i_stop="117817" i_length="1562"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="117818" e_stop="117916" e_length="99"/>
          </exon>
          <intron i_serial="7" don_prob="0.966" acc_prob="0.998">
            <gDNA_intron_boundary i_start="117917" i_stop="118027" i_length="111"/>
          </intron>
          <exon e_serial="8" e_score="0.990">
            <gDNA_exon_boundary e_start="118028" e_stop="118410" e_length="383"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113722" stop="113915"/>
              <exon start="115069" stop="115221"/>
              <exon start="115307" stop="115422"/>
              <exon start="115605" stop="115696"/>
              <exon start="116097" stop="116118"/>
              <exon start="116187" stop="116255"/>
              <exon start="117818" stop="117916"/>
              <exon start="118028" stop="118410"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U320992" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTCAACTCGACGAGCATTAGCAGCTTACCGCAACATCTATGGTGCATTACGGGCTACCAATTTCACTGCAAATCGTTTGATAGGCTCCACTTTGAGTCCAATTCGCTATGAAACTGTTCCCTGTTCGCTGGAGCAGACCACCAATTTTCTGCTTGAAAGTCGGAGGAGTTTTGCTAAAGGAAGGAAACAAATTA : GGGAGGAGGTAGATGGTGATGATTATGGAAGTGTAACCACAGCTGTAAACGTAGGTCCTAACATTAAAGCTACTGCAGTCTCACAGATGGAGGCAGCAATTGATGCATTATCACGAGAATTGACCAAGCTGCGAACTGGAAGAGCATCGGCTG : GAATGCTTGATCATATCATCGTTGATTCAGGAGGTGTTAAGACACCTCTTTGCAGGATGGCTGTCATTTCAGTGCTAGACCCAAAAACCTTGTCAGTGAATCCTTATGATCCAGAT : TCCCTCAAAGAGTTGGAGAAAGCCATTATTTCATCTCCATTGGGGTTAAATCCTCAATCCGACAACCAGAGATTAATTGTACCAATACCTCC : GTTGACTAAGGAGCATGTGCAG : GCTGTGTGCAAAGTGGTTGCGAAATCATCTGAAGACGTTAAGCAAAGTATAAGACGAGCACGCCAGAAG : GCTTTGGACACGATAAAGAAATCTGTGCCCAAGAAGAAAGACAAAGACAAGTCAGCTTCAGCTTTCTCAGAAGACGATGCAAAAAGACTGGAGAAGGAA : ATTGATGACTTGACAAAAAAGTTTATTAAGTCAGCAGAAGATATGTGCAAGTCAAAGGACAGAGAAATAACTAGCAGTTGAAGAAACTAGTTTTAGTTTCATCGGAGGCTCACGCAAAGGTTCAATTTTTTGGCTGAAGCTATAGAGGGAATTATTTACTCTCCAGAATTCTTGTACTCGAAGTCGGAAAAAGATAACAAGACATGTTACAACTTACAAGTGATCATGCTAATACTTGAAAAGAAAGATATTGTATTTCATATAACCTATGCTGTTGGTTTTTAGCTTTTCATGTTCAGGATCATATATCATTTCATTTTGTGACAAGGGCTGAGATCATGTAACTTTTTTTTATATATAAATCAAACAACTATTTGTTCTCT</gDNA_template>
            <first_frame> L  N  S  T  S  I  S  S  L  P  Q  H  L  W  C  I  T  G  Y  Q  F  H  C  K  S  F  D  R  L  H  F  E  S  N  S  L  *  N  C  S  L  F  A  G  A  D  H  Q  F  S  A  *  K  S  E  E  F  C  *  R  K  E  T  N  * :   G  G  G  R  W  *  *  L  W  K  C  N  H  S  C  K  R  R  S  *  H  *  S  Y  C  S  L  T  D  G  G  S  N  *  C  I  I  T  R  I  D  Q  A  A  N  W  K  S  I  G  W :   N  A  *  S  Y  H  R  *  F  R  R  C  *  D  T  S  L  Q  D  G  C  H  F  S  A  R  P  K  N  L  V  S  E  S  L  *  S  R   : F  P  Q  R  V  G  E  S  H  Y  F  I  S  I  G  V  K  S  S  I  R  Q  P  E  I  N  C  T  N  T  S  :  V  D  *  G  A  C  A   : G  C  V  Q  S  G  C  E  I  I  *  R  R  *  A  K  Y  K  T  S  T  P  E   : G  F  G  H  D  K  E  I  C  A  Q  E  E  R  Q  R  Q  V  S  F  S  F  L  R  R  R  C  K  K  T  G  E  G   : N  *  *  L  D  K  K  V  Y  *  V  S  R  R  Y  V  Q  V  K  G  Q  R  N  N  *  Q  L  K  K  L  V  L  V  S  S  E  A  H  A  K  V  Q  F  F  G  *  S  Y  R  G  N  Y  L  L  S  R  I  L  V  L  E  V  G  K  R  *  Q  D  M  L  Q  L  T  S  D  H  A  N  T  *  K  E  R  Y  C  I  S  Y  N  L  C  C  W  F  L  A  F  H  V  Q  D  H  I  S  F  H  F  V  T  R  A  E  I  M  *  L  F  F  I  Y  K  S  N  N  Y  L  F  S </first_frame>
            <second_frame>  S  T  R  R  A  L  A  A  Y  R  N  I  Y  G  A  L  R  A  T  N  F  T  A  N  R  L  I  G  S  T  L  S  P  I  R  Y  E  T  V  P  C  S  L  E  Q  T  T  N  F  L  L  E  S  R  R  S  F  A  K  G  R  K  Q  I   : R  E  E  V  D  G  D  D  Y  G  S  V  T  T  A  V  N  V  G  P  N  I  K  A  T  A  V  S  Q  M  E  A  A  I  D  A  L  S  R  E  L  T  K  L  R  T  G  R  A  S  A   : G  M  L  D  H  I  I  V  D  S  G  G  V  K  T  P  L  C  R  M  A  V  I  S  V  L  D  P  K  T  L  S  V  N  P  Y  D  P  D  :  S  L  K  E  L  E  K  A  I  I  S  S  P  L  G  L  N  P  Q  S  D  N  Q  R  L  I  V  P  I  P  P :   L  T  K  E  H  V  Q  :  A  V  C  K  V  V  A  K  S  S  E  D  V  K  Q  S  I  R  R  A  R  Q  K  :  A  L  D  T  I  K  K  S  V  P  K  K  K  D  K  D  K  S  A  S  A  F  S  E  D  D  A  K  R  L  E  K  E  :  I  D  D  L  T  K  K  F  I  K  S  A  E  D  M  C  K  S  K  D  R  E  I  T  S  S  *  R  N  *  F  *  F  H  R  R  L  T  Q  R  F  N  F  L  A  E  A  I  E  G  I  I  Y  S  P  E  F  L  Y  S  K  S  E  K  D  N  K  T  C  Y  N  L  Q  V  I  M  L  I  L  E  K  K  D  I  V  F  H  I  T  Y  A  V  G  F  *  L  F  M  F  R  I  I  Y  H  F  I  L  *  Q  G  L  R  S  C  N  F  F  L  Y  I  N  Q  T  T  I  C  S   </second_frame>
            <third_frame>   Q  L  D  E  H  *  Q  L  T  A  T  S  M  V  H  Y  G  L  P  I  S  L  Q  I  V  *  *  A  P  L  *  V  Q  F  A  M  K  L  F  P  V  R  W  S  R  P  P  I  F  C  L  K  V  G  G  V  L  L  K  E  G  N  K  L  :  G  R  R  *  M  V  M  I  M  E  V  *  P  Q  L  *  T  *  V  L  T  L  K  L  L  Q  S  H  R  W  R  Q  Q  L  M  H  Y  H  E  N  *  P  S  C  E  L  E  E  H  R  L  :  E  C  L  I  I  S  S  L  I  Q  E  V  L  R  H  L  F  A  G  W  L  S  F  Q  C  *  T  Q  K  P  C  Q  *  I  L  M  I  Q  I :   P  S  K  S  W  R  K  P  L  F  H  L  H  W  G  *  I  L  N  P  T  T  R  D  *  L  Y  Q  Y  L   : R  *  L  R  S  M  C  R :   L  C  A  K  W  L  R  N  H  L  K  T  L  S  K  V  *  D  E  H  A  R  R :   L  W  T  R  *  R  N  L  C  P  R  R  K  T  K  T  S  Q  L  Q  L  S  Q  K  T  M  Q  K  D  W  R  R  K :   L  M  T  *  Q  K  S  L  L  S  Q  Q  K  I  C  A  S  Q  R  T  E  K  *  L  A  V  E  E  T  S  F  S  F  I  G  G  S  R  K  G  S  I  F  W  L  K  L  *  R  E  L  F  T  L  Q  N  S  C  T  R  S  R  K  K  I  T  R  H  V  T  T  Y  K  *  S  C  *  Y  L  K  R  K  I  L  Y  F  I  *  P  M  L  L  V  F  S  F  S  C  S  G  S  Y  I  I  S  F  C  D  K  G  *  D  H  V  T  F  F  Y  I  *  I  K  Q  L  F  V  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0143O06.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="113723" stop="113915"/>
                    <exon start="115069" stop="115221"/>
                    <exon start="115307" stop="115422"/>
                    <exon start="115605" stop="115696"/>
                    <exon start="116097" stop="116118"/>
                    <exon start="116187" stop="116255"/>
                    <exon start="117818" stop="117916"/>
                    <exon start="118028" stop="118108"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>822</number_coding_nucleotides>
                  <number_encoded_amino_acids>274</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>STRRALAAYRNIYGALRATNFTANRLIGSTLSPIRYETVPCSLEQTTNFLLESRRSFAKGRKQIREEVDGDDYGSVTTAVNVGPNIKATAVSQMEAAIDALSRELTKLRTGRASAGMLDHIIVDSGGVKTPLCRMAVISVLDPKTLSVNPYDPDSLKELEKAIISSPLGLNPQSDNQRLIVPIPPLTKEHVQAVCKVVAKSSEDVKQSIRRARQKALDTIKKSVPKKKDKDKSASAFSEDDAKRLEKEIDDLTKKFIKSAEDMCKSKDREITSS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="116926" e_stop="117578"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="116926" e_stop="117578" e_length="653"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116926" stop="117578"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U331274" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATATCAAAATGAAGCTGGAGGTATGTTGGACTTGGTTGTTGCTGGGTAACAAAGACCTGACTTTCTGTTTCAGGTATGTTAATGTGATTTGGGTGCGGAGAGCTTGAAAAGTAAATGGCTACTAACTGTAGTGCTTTAGAGGGGTTATTTTTTGTAGTCCTGTAGTTGAATTCTGGTAGTTTCTGGTTGCAACAATGTCTAGGGAAAGGTGCTTTAGAGAATATTCTTGTAAAAAATAAGGTTTAGTGGCCAAACTACAGGAACAAAAGAGAAGGAATATTGGCATTGTGGGAGGTTTTAACATTCTAGTTCCTTTTTAGTTAGAGAAGTTAAGGAGGATAACAAAAATATTATAGAGAGAAAACGTGAGAAATTCCAACTTTGGAGATGCTAAATGAATTATCACTTAGTTCATTAACCTTCAACCTAGTTTGGCCACCAACAAGAGGTTACTGTAGTTTTCAGTATGCTGTCCTCTATTAACAAATTAATGGAGCTCTTCCAGTAGTTTCTTGTTTGGAATTGAGGGAAACATCTTTGTTCAAAAGTTGTGTGTGTTATGCTTATATGATGTCCACGATACTCTCCTCGCATGACTTGGACTGTACTGAAGATGTGGTGAATTACCTTTTTTGTCACCTATCATTTATGA</gDNA_template>
            <first_frame> N  I  K  M  K  L  E  V  C  W  T  W  L  L  L  G  N  K  D  L  T  F  C  F  R  Y  V  N  V  I  W  V  R  R  A  *  K  V  N  G  Y  *  L  *  C  F  R  G  V  I  F  C  S  P  V  V  E  F  W  *  F  L  V  A  T  M  S  R  E  R  C  F  R  E  Y  S  C  K  K  *  G  L  V  A  K  L  Q  E  Q  K  R  R  N  I  G  I  V  G  G  F  N  I  L  V  P  F  *  L  E  K  L  R  R  I  T  K  I  L  *  R  E  N  V  R  N  S  N  F  G  D  A  K  *  I  I  T  *  F  I  N  L  Q  P  S  L  A  T  N  K  R  L  L  *  F  S  V  C  C  P  L  L  T  N  *  W  S  S  S  S  S  F  L  F  G  I  E  G  N  I  F  V  Q  K  L  C  V  L  C  L  Y  D  V  H  D  T  L  L  A  *  L  G  L  Y  *  R  C  G  E  L  P  F  L  S  P  I  I  Y   </first_frame>
            <second_frame>  I  S  K  *  S  W  R  Y  V  G  L  G  C  C  W  V  T  K  T  *  L  S  V  S  G  M  L  M  *  F  G  C  G  E  L  E  K  *  M  A  T  N  C  S  A  L  E  G  L  F  F  V  V  L  *  L  N  S  G  S  F  W  L  Q  Q  C  L  G  K  G  A  L  E  N  I  L  V  K  N  K  V  *  W  P  N  Y  R  N  K  R  E  G  I  L  A  L  W  E  V  L  T  F  *  F  L  F  S  *  R  S  *  G  G  *  Q  K  Y  Y  R  E  K  T  *  E  I  P  T  L  E  M  L  N  E  L  S  L  S  S  L  T  F  N  L  V  W  P  P  T  R  G  Y  C  S  F  Q  Y  A  V  L  Y  *  Q  I  N  G  A  L  P  V  V  S  C  L  E  L  R  E  T  S  L  F  K  S  C  V  C  Y  A  Y  M  M  S  T  I  L  S  S  H  D  L  D  C  T  E  D  V  V  N  Y  L  F  C  H  L  S  F  M  </second_frame>
            <third_frame>   Y  Q  N  E  A  G  G  M  L  D  L  V  V  A  G  *  Q  R  P  D  F  L  F  Q  V  C  *  C  D  L  G  A  E  S  L  K  S  K  W  L  L  T  V  V  L  *  R  G  Y  F  L  *  S  C  S  *  I  L  V  V  S  G  C  N  N  V  *  G  K  V  L  *  R  I  F  L  *  K  I  R  F  S  G  Q  T  T  G  T  K  E  K  E  Y  W  H  C  G  R  F  *  H  S  S  S  F  L  V  R  E  V  K  E  D  N  K  N  I  I  E  R  K  R  E  K  F  Q  L  W  R  C  *  M  N  Y  H  L  V  H  *  P  S  T  *  F  G  H  Q  Q  E  V  T  V  V  F  S  M  L  S  S  I  N  K  L  M  E  L  F  Q  *  F  L  V  W  N  *  G  K  H  L  C  S  K  V  V  C  V  M  L  I  *  C  P  R  Y  S  P  R  M  T  W  T  V  L  K  M  W  *  I  T  F  F  V  T  Y  H  L  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C11HBa0143O06.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="126883" PGL_stop="121170"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="126883" e_stop="126304"/>
            <exon e_start="125436" e_stop="125256"/>
            <exon e_start="125148" e_stop="125096"/>
            <exon e_start="124643" e_stop="124542"/>
            <exon e_start="124471" e_stop="124363"/>
            <exon e_start="124248" e_stop="124170"/>
            <exon e_start="123975" e_stop="123810"/>
            <exon e_start="122440" e_stop="122305"/>
            <exon e_start="122211" e_stop="122042"/>
            <exon e_start="121859" e_stop="121637"/>
            <exon e_start="121528" e_stop="121170"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="0.986"/>
          <exon-intron don_prob="0.745" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.785" e_score="1.000"/>
          <exon-intron don_prob="0.461" acc_prob="0.685" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.801" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.646" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.454" e_score="0.993"/>
          <exon-intron don_prob="0.988" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.310" acc_prob="0.988" e_score="1.000"/>
          <exon-only e_score="0.975"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.986">
            <gDNA_exon_boundary e_start="126883" e_stop="126304" e_length="580"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="126303" i_stop="125437" i_length="867"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="125436" e_stop="125256" e_length="181"/>
          </exon>
          <intron i_serial="2" don_prob="0.745" acc_prob="0.988">
            <gDNA_intron_boundary i_start="125255" i_stop="125149" i_length="107"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="125148" e_stop="125096" e_length="53"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.785">
            <gDNA_intron_boundary i_start="125095" i_stop="124644" i_length="452"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="124643" e_stop="124542" e_length="102"/>
          </exon>
          <intron i_serial="4" don_prob="0.461" acc_prob="0.685">
            <gDNA_intron_boundary i_start="124541" i_stop="124472" i_length="70"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="124471" e_stop="124363" e_length="109"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="124362" i_stop="124249" i_length="114"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="124248" e_stop="124170" e_length="79"/>
          </exon>
          <intron i_serial="6" don_prob="0.997" acc_prob="0.801">
            <gDNA_intron_boundary i_start="124169" i_stop="123976" i_length="194"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="123975" e_stop="123810" e_length="166"/>
          </exon>
          <intron i_serial="7" don_prob="0.977" acc_prob="0.646">
            <gDNA_intron_boundary i_start="123809" i_stop="122441" i_length="1369"/>
          </intron>
          <exon e_serial="8" e_score="0.993">
            <gDNA_exon_boundary e_start="122440" e_stop="122305" e_length="136"/>
          </exon>
          <intron i_serial="8" don_prob="0.996" acc_prob="0.454">
            <gDNA_intron_boundary i_start="122304" i_stop="122212" i_length="93"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="122211" e_stop="122042" e_length="170"/>
          </exon>
          <intron i_serial="9" don_prob="0.988" acc_prob="0.977">
            <gDNA_intron_boundary i_start="122041" i_stop="121860" i_length="182"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="121859" e_stop="121637" e_length="223"/>
          </exon>
          <intron i_serial="10" don_prob="0.310" acc_prob="0.988">
            <gDNA_intron_boundary i_start="121636" i_stop="121529" i_length="108"/>
          </intron>
          <exon e_serial="11" e_score="0.975">
            <gDNA_exon_boundary e_start="121528" e_stop="121170" e_length="359"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126883" stop="126456"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335889" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126664" stop="126304"/>
              <exon start="125436" stop="125256"/>
              <exon start="125148" stop="125096"/>
              <exon start="124643" stop="124542"/>
              <exon start="124471" stop="124363"/>
              <exon start="124248" stop="124170"/>
              <exon start="123975" stop="123810"/>
              <exon start="122440" stop="122305"/>
              <exon start="122211" stop="122042"/>
              <exon start="121859" stop="121637"/>
              <exon start="121528" stop="121170"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U316920" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAAGGGGAGAAAGAAACTTAAAGCTCTCACCTTTATACATATTTATAAAAATATATACATAATGGTGTCTCTCCTTTTCTAATTTTAGTTTTAGTTTTTTTTTTTTTTGCATGTATAAGGAATCATTTGCTTTTGGGTGTCTTTGACATATGGAATTGCTTTATCAGAACAAAGAAAAAGAAAGAAAGAGAGAATATATAAAGAGGATATGAGCTGATGTTTAATGGGTTCTTTATGTTACTGCTGTTGTTCAATGGTGTTGCTTTCACTCCTTTCATAGTTTGTTGTGAAAAAAATCCAATCTTTTTGAAGATATAGGAAGAATATAAGTGTATTGATTGAAAGGGGTTTGTGGGGGTGCTGAAAGATTAGGTTTTTTTCTTGTTTGAGGGTGAAATGTTGGCATTGGTAGGGGGAGAAGGTGATATGGAGCAAGAATTTGATGCAAAGCTAAAGATTCAGAACAATTCAGCTAATACTCAGAGATCTAAGAGCTTTGCATTTAGGGCACCACAAGAGAATTTTACAATTCAAGATTTTGAATTGGGGAAGATCTATGGAGTTGGTTCTTATTCCAAG : GTTGTCAGAGCGAAAAAGAAAGATACTGCGAATGTTTATGCCTTGAAGATCATGGACAAGAAGTTCATCACTAAGGAAAATAAGACTGCTTATGTGAAACTAGAGCGTATTGTACTTGATCAGTTAGATCATCCCGGTGTTGTCCGACTATTTTTCACCTTTCAAGACACTTTTTCACTGT : ACATGGCACTTGAGTCTTGTGAAGGTGGAGAGCTTTTTGATCAAATAACAAGG : AAAGGCCGTTTGTCTGAAGATGAGGCACGCTTTTATGCAGCTGAAGTTGTAGACGCTCTTGAATATATACATAGTATGGGATTGATTCATCGAGACATTAAG : CCAGAGAACCTGCTTCTTACTTCAGATGGACATATTAAAATTGCAGACTTTGGCAGTGTAAAGCCAATGCAGGATAGCAGAATAACAGTCCTTCCAAATGCTGCATCAG : ATGACAAAGCCTGTACTTTTGTGGGAACAGCCGCTTATGTACCTCCTGAAGTTTTAAATTCTTCTCCTGCGACTTTTGG : AAATGATCTTTGGGCACTTGGCTGCACATTGTATCAAATGCTTTCAGGAACTTCTCCGTTTAAAGATGCCAGTGAATGGCTCATCTTCCAGAGAATCATTGCCAGAGATATTAGATTCCCAAATTATTTTTCAAATGAAGCCAGAGATATTATTGATCAGCTGCTG : GATGTTGATCCTAGCAGAAGACCTGGTGCTGGACCTGATGGTTATGCTTTCCTTGAAAAATCATCCTTTCTTTAGTGGGATCGATTGGGAGAATTTGAGGTTGCAGACCCCTCCAAGGCTTGCCATGGAGCCAAAA : GCCCCGTCAACTCATAGCAGTGGTGATGAGCAAGATCCTTCATGGAATCCATCACACATTGGAGATGGTTCAGTTAGACCTAACGATGGAAACGGTGCTGCTGCATCAGTTTCTGAAGCTGGTAACAGTATCACCAGGCTCGCATCTATCGACTCCTTTGACTCAAAATG : GAAGCAATTTTTAGATCCTGGTGAATCCGTGCTCATGATCTCGATGGTGAAAAAGTTGCAGAAACTCACAAGCAAGAAAGTTCAGCTAATCCTAACAAATAAACCAAAGTTGATTTACGTAGATCCCTCAAAGTTGGTGATCAAAGGGAACATTATATGGTCCGACAATCCTAACGATCTTAGCATTCAAGTCACAAGCCCTTCACAGTTCAAGATTTGTACA : CCAAAGAAAGTTATGTCATTCGAGGATGCCAAAAACCGAGCACAACAGTGGAAAAAGGCGATTGAAGCTCTCCAGAACCGGTGATTCTGGTCTTTTTGTTGTTTTGACTACACATTCTTTGCAGATCGAACGGGGTTCCAGAAACAGTTGGATGCTCCTAAAAAGAACTTCTTATCAAACACCACTCAATTTTACAGCTTTACTCTCTCTAGTAGAAATTTTCACTTATCCTTGGATGAAGCTCACTCCTGTTTACACAAATCACATTTGTATGTTTACAGACTTGTAAAGACACAAAAGTTTTATTGAAAGAACTTGATGAGCTGATTTTATCAGCTATTTTGCTATCTATTATTTCA</gDNA_template>
            <first_frame> K  R  G  E  R  N  L  K  L  S  P  L  Y  I  F  I  K  I  Y  T  *  W  C  L  S  F  S  N  F  S  F  S  F  F  F  F  C  M  Y  K  E  S  F  A  F  G  C  L  *  H  M  E  L  L  Y  Q  N  K  E  K  E  R  K  R  E  Y  I  K  R  I  *  A  D  V  *  W  V  L  Y  V  T  A  V  V  Q  W  C  C  F  H  S  F  H  S  L  L  *  K  K  S  N  L  F  E  D  I  G  R  I  *  V  Y  *  L  K  G  V  C  G  G  A  E  R  L  G  F  F  L  V  *  G  *  N  V  G  I  G  R  G  R  R  *  Y  G  A  R  I  *  C  K  A  K  D  S  E  Q  F  S  *  Y  S  E  I  *  E  L  C  I  *  G  T  T  R  E  F  Y  N  S  R  F  *  I  G  E  D  L  W  S  W  F  L  F  Q   : G  C  Q  S  E  K  E  R  Y  C  E  C  L  C  L  E  D  H  G  Q  E  V  H  H  *  G  K  *  D  C  L  C  E  T  R  A  Y  C  T  *  S  V  R  S  S  R  C  C  P  T  I  F  H  L  S  R  H  F  F  T  V :   H  G  T  *  V  L  *  R  W  R  A  F  *  S  N  N  K   : E  R  P  F  V  *  R  *  G  T  L  L  C  S  *  S  C  R  R  S  *  I  Y  T  *  Y  G  I  D  S  S  R  H  *   : A  R  E  P  A  S  Y  F  R  W  T  Y  *  N  C  R  L  W  Q  C  K  A  N  A  G  *  Q  N  N  S  P  S  K  C  C  I  R :   *  Q  S  L  Y  F  C  G  N  S  R  L  C  T  S  *  S  F  K  F  F  S  C  D  F  W  :  K  *  S  L  G  T  W  L  H  I  V  S  N  A  F  R  N  F  S  V  *  R  C  Q  *  M  A  H  L  P  E  N  H  C  Q  R  Y  *  I  P  K  L  F  F  K  *  S  Q  R  Y  Y  *  S  A  A   : G  C  *  S  *  Q  K  T  W  C  W  T  *  W  L  C  F  P  *  K  I  I  L  S  L  V  G  S  I  G  R  I  *  G  C  R  P  L  Q  G  L  P  W  S  Q  K :   P  R  Q  L  I  A  V  V  M  S  K  I  L  H  G  I  H  H  T  L  E  M  V  Q  L  D  L  T  M  E  T  V  L  L  H  Q  F  L  K  L  V  T  V  S  P  G  S  H  L  S  T  P  L  T  Q  N   : G  S  N  F  *  I  L  V  N  P  C  S  *  S  R  W  *  K  S  C  R  N  S  Q  A  R  K  F  S  *  S  *  Q  I  N  Q  S  *  F  T  *  I  P  Q  S  W  *  S  K  G  T  L  Y  G  P  T  I  L  T  I  L  A  F  K  S  Q  A  L  H  S  S  R  F  V  H :   Q  R  K  L  C  H  S  R  M  P  K  T  E  H  N  S  G  K  R  R  L  K  L  S  R  T  G  D  S  G  L  F  V  V  L  T  T  H  S  L  Q  I  E  R  G  S  R  N  S  W  M  L  L  K  R  T  S  Y  Q  T  P  L  N  F  T  A  L  L  S  L  V  E  I  F  T  Y  P  W  M  K  L  T  P  V  Y  T  N  H  I  C  M  F  T  D  L  *  R  H  K  S  F  I  E  R  T  *  *  A  D  F  I  S  Y  F  A  I  Y  Y  F  </first_frame>
            <second_frame>  K  G  E  K  E  T  *  S  S  H  L  Y  T  Y  L  *  K  Y  I  H  N  G  V  S  P  F  L  I  L  V  L  V  F  F  F  F  A  C  I  R  N  H  L  L  L  G  V  F  D  I  W  N  C  F  I  R  T  K  K  K  K  E  R  E  N  I  *  R  G  Y  E  L  M  F  N  G  F  F  M  L  L  L  L  F  N  G  V  A  F  T  P  F  I  V  C  C  E  K  N  P  I  F  L  K  I  *  E  E  Y  K  C  I  D  *  K  G  F  V  G  V  L  K  D  *  V  F  F  L  F  E  G  E  M  L  A  L  V  G  G  E  G  D  M  E  Q  E  F  D  A  K  L  K  I  Q  N  N  S  A  N  T  Q  R  S  K  S  F  A  F  R  A  P  Q  E  N  F  T  I  Q  D  F  E  L  G  K  I  Y  G  V  G  S  Y  S  K  :  V  V  R  A  K  K  K  D  T  A  N  V  Y  A  L  K  I  M  D  K  K  F  I  T  K  E  N  K  T  A  Y  V  K  L  E  R  I  V  L  D  Q  L  D  H  P  G  V  V  R  L  F  F  T  F  Q  D  T  F  S  L   : Y  M  A  L  E  S  C  E  G  G  E  L  F  D  Q  I  T  R  :  K  G  R  L  S  E  D  E  A  R  F  Y  A  A  E  V  V  D  A  L  E  Y  I  H  S  M  G  L  I  H  R  D  I  K  :  P  E  N  L  L  L  T  S  D  G  H  I  K  I  A  D  F  G  S  V  K  P  M  Q  D  S  R  I  T  V  L  P  N  A  A  S   : D  D  K  A  C  T  F  V  G  T  A  A  Y  V  P  P  E  V  L  N  S  S  P  A  T  F  G :   N  D  L  W  A  L  G  C  T  L  Y  Q  M  L  S  G  T  S  P  F  K  D  A  S  E  W  L  I  F  Q  R  I  I  A  R  D  I  R  F  P  N  Y  F  S  N  E  A  R  D  I  I  D  Q  L  L  :  D  V  D  P  S  R  R  P  G  A  G  P  D  G  Y  A  F  L  E  K  S  S  F  L  *  W  D  R  L  G  E  F  E  V  A  D  P  S  K  A  C  H  G  A  K   : S  P  V  N  S  *  Q  W  *  *  A  R  S  F  M  E  S  I  T  H  W  R  W  F  S  *  T  *  R  W  K  R  C  C  C  I  S  F  *  S  W  *  Q  Y  H  Q  A  R  I  Y  R  L  L  *  L  K  M  :  E  A  I  F  R  S  W  *  I  R  A  H  D  L  D  G  E  K  V  A  E  T  H  K  Q  E  S  S  A  N  P  N  K  *  T  K  V  D  L  R  R  S  L  K  V  G  D  Q  R  E  H  Y  M  V  R  Q  S  *  R  S  *  H  S  S  H  K  P  F  T  V  Q  D  L  Y   : T  K  E  S  Y  V  I  R  G  C  Q  K  P  S  T  T  V  E  K  G  D  *  S  S  P  E  P  V  I  L  V  F  L  L  F  *  L  H  I  L  C  R  S  N  G  V  P  E  T  V  G  C  S  *  K  E  L  L  I  K  H  H  S  I  L  Q  L  Y  S  L  *  *  K  F  S  L  I  L  G  *  S  S  L  L  F  T  Q  I  T  F  V  C  L  Q  T  C  K  D  T  K  V  L  L  K  E  L  D  E  L  I  L  S  A  I  L  L  S  I  I  S </second_frame>
            <third_frame>   K  G  R  K  K  L  K  A  L  T  F  I  H  I  Y  K  N  I  Y  I  M  V  S  L  L  F  *  F  *  F  *  F  F  F  F  L  H  V  *  G  I  I  C  F  W  V  S  L  T  Y  G  I  A  L  S  E  Q  R  K  R  K  K  E  R  I  Y  K  E  D  M  S  *  C  L  M  G  S  L  C  Y  C  C  C  S  M  V  L  L  S  L  L  S  *  F  V  V  K  K  I  Q  S  F  *  R  Y  R  K  N  I  S  V  L  I  E  R  G  L  W  G  C  *  K  I  R  F  F  S  C  L  R  V  K  C  W  H  W  *  G  E  K  V  I  W  S  K  N  L  M  Q  S  *  R  F  R  T  I  Q  L  I  L  R  D  L  R  A  L  H  L  G  H  H  K  R  I  L  Q  F  K  I  L  N  W  G  R  S  M  E  L  V  L  I  P  R :   L  S  E  R  K  R  K  I  L  R  M  F  M  P  *  R  S  W  T  R  S  S  S  L  R  K  I  R  L  L  M  *  N  *  S  V  L  Y  L  I  S  *  I  I  P  V  L  S  D  Y  F  S  P  F  K  T  L  F  H  C  :  T  W  H  L  S  L  V  K  V  E  S  F  L  I  K  *  Q  G :   K  A  V  C  L  K  M  R  H  A  F  M  Q  L  K  L  *  T  L  L  N  I  Y  I  V  W  D  *  F  I  E  T  L  S :   Q  R  T  C  F  L  L  Q  M  D  I  L  K  L  Q  T  L  A  V  *  S  Q  C  R  I  A  E  *  Q  S  F  Q  M  L  H  Q  :  M  T  K  P  V  L  L  W  E  Q  P  L  M  Y  L  L  K  F  *  I  L  L  L  R  L  L   : E  M  I  F  G  H  L  A  A  H  C  I  K  C  F  Q  E  L  L  R  L  K  M  P  V  N  G  S  S  S  R  E  S  L  P  E  I  L  D  S  Q  I  I  F  Q  M  K  P  E  I  L  L  I  S  C  W :   M  L  I  L  A  E  D  L  V  L  D  L  M  V  M  L  S  L  K  N  H  P  F  F  S  G  I  D  W  E  N  L  R  L  Q  T  P  P  R  L  A  M  E  P  K  :  A  P  S  T  H  S  S  G  D  E  Q  D  P  S  W  N  P  S  H  I  G  D  G  S  V  R  P  N  D  G  N  G  A  A  A  S  V  S  E  A  G  N  S  I  T  R  L  A  S  I  D  S  F  D  S  K  W :   K  Q  F  L  D  P  G  E  S  V  L  M  I  S  M  V  K  K  L  Q  K  L  T  S  K  K  V  Q  L  I  L  T  N  K  P  K  L  I  Y  V  D  P  S  K  L  V  I  K  G  N  I  I  W  S  D  N  P  N  D  L  S  I  Q  V  T  S  P  S  Q  F  K  I  C  T  :  P  K  K  V  M  S  F  E  D  A  K  N  R  A  Q  Q  W  K  K  A  I  E  A  L  Q  N  R  *  F  W  S  F  C  C  F  D  Y  T  F  F  A  D  R  T  G  F  Q  K  Q  L  D  A  P  K  K  N  F  L  S  N  T  T  Q  F  Y  S  F  T  L  S  S  R  N  F  H  L  S  L  D  E  A  H  S  C  L  H  K  S  H  L  Y  V  Y  R  L  V  K  T  Q  K  F  Y  *  K  N  L  M  S  *  F  Y  Q  L  F  C  Y  L  L  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0143O06.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="126510" stop="126304"/>
                    <exon start="125436" stop="125256"/>
                    <exon start="125148" stop="125096"/>
                    <exon start="124643" stop="124542"/>
                    <exon start="124471" stop="124363"/>
                    <exon start="124248" stop="124170"/>
                    <exon start="123975" stop="123810"/>
                    <exon start="122440" stop="122366"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>969</number_coding_nucleotides>
                  <number_encoded_amino_acids>323</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VFFLFEGEMLALVGGEGDMEQEFDAKLKIQNNSANTQRSKSFAFRAPQENFTIQDFELGKIYGVGSYSKVVRAKKKDTANVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITRKGRLSEDEARFYAAEVVDALEYIHSMGLIHRDIKPENLLLTSDGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIARDIRFPNYFSNEARDIIDQLLDVDPSRRPGAGPDGYAFLEKSSFL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0143O06.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="121719" stop="121637"/>
                    <exon start="121528" stop="121240"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>369</number_coding_nucleotides>
                  <number_encoded_amino_acids>123</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SKGTLYGPTILTILAFKSQALHSSRFVHQRKLCHSRMPKTEHNSGKRRLKLSRTGDSGLFVVLTTHSLQIERGSRNSWMLLKRTSYQTPLNFTALLSLVEIFTYPWMKLTPVYTNHICMFTDL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0143O06.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="122342" stop="122305"/>
                    <exon start="122211" stop="122042"/>
                    <exon start="121859" stop="121846"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GCRPLQGLPWSQKPRQLIAVVMSKILHGIHHTLEMVQLDLTMETVLLHQFLKLVTVSPGSHLSTPLTQNGSNF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="132613" PGL_stop="131703"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="132613" e_stop="131703"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="132613" e_stop="131703" e_length="911"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="132613" stop="131703"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326970" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAAGCTTGTTATCTAATAGAATGAGGCTATTTTGTAGTCGGTTGAACAGAGCAAGCTCGTCTCTCCGTGCCAGAATAAAGCCTAAAACATGCAGTGGAGGATTGGTTCTTGCTGTAATCTTTATAGTCACTGTGGTGTTAATGTGCACTGGAGTTAAATACATCTATGGAGGCAGCGGTGCAGAGGAAGCTTACCCGTTAAATGGTCAGTACTCTCAGTTCACTTTATTAACAATGACCTACGATGCTCGGCTCTGGAACTTGAAAATGTATGTCAAGCATTACTCAAGGTGTTCTTCAGTACGTGAGATCGTTGTAGTGTGGAATAAAGGCCAACCTCCAGAACTGAGTGAGCTCGATTCAGCAGTGCCAGTGAGGATAAGAGTAGAGAAACAGAACTCACTAAACAATCGATTCAAAGTAGATCCTTTGATAAAGACACGAGCAGTTCTTGAACTTGATGATGACATTATGATGCCTTGTGATGATGTTGAAAGGGGATTTAAGGTATGGCGTGAGTACCCTGAACGCATCGTTGGGTTTTACCCCCGGCTTGCAGATGGAAACCCATTGAAATATAGAGCTGAGAATCATGCTCGCGAGCACAATGGATACAACATGATTCTTACAGGAGCTGCCTTCATGGACAGCAAAATGGCTTTCGAAAAGTACTGGAGCAATGAAGCTGCAGCAGGAAGGGCCGTGGTGGACAAGCTTTTCAACTGTGAAGATGTGTTGCTAAACTACTTGTATGCAAACGCGAGCTCCTCCAGTACAGTTGAATACGTAAAACCAGCATGGGCAATCGATACTTCAAAGTTTTCTGGCGTTGCAATTAGCCGGAATACACAGACTCACTATGGACTCAGAAGCAGTTGCCTCCAAAAGTTCTCAGAAATGTATGGAAGTATA</gDNA_template>
            <first_frame> Q  A  C  Y  L  I  E  *  G  Y  F  V  V  G  *  T  E  Q  A  R  L  S  V  P  E  *  S  L  K  H  A  V  E  D  W  F  L  L  *  S  L  *  S  L  W  C  *  C  A  L  E  L  N  T  S  M  E  A  A  V  Q  R  K  L  T  R  *  M  V  S  T  L  S  S  L  Y  *  Q  *  P  T  M  L  G  S  G  T  *  K  C  M  S  S  I  T  Q  G  V  L  Q  Y  V  R  S  L  *  C  G  I  K  A  N  L  Q  N  *  V  S  S  I  Q  Q  C  Q  *  G  *  E  *  R  N  R  T  H  *  T  I  D  S  K  *  I  L  *  *  R  H  E  Q  F  L  N  L  M  M  T  L  *  C  L  V  M  M  L  K  G  D  L  R  Y  G  V  S  T  L  N  A  S  L  G  F  T  P  G  L  Q  M  E  T  H  *  N  I  E  L  R  I  M  L  A  S  T  M  D  T  T  *  F  L  Q  E  L  P  S  W  T  A  K  W  L  S  K  S  T  G  A  M  K  L  Q  Q  E  G  P  W  W  T  S  F  S  T  V  K  M  C  C  *  T  T  C  M  Q  T  R  A  P  P  V  Q  L  N  T  *  N  Q  H  G  Q  S  I  L  Q  S  F  L  A  L  Q  L  A  G  I  H  R  L  T  M  D  S  E  A  V  A  S  K  S  S  Q  K  C  M  E  V   </first_frame>
            <second_frame>  K  L  V  I  *  *  N  E  A  I  L  *  S  V  E  Q  S  K  L  V  S  P  C  Q  N  K  A  *  N  M  Q  W  R  I  G  S  C  C  N  L  Y  S  H  C  G  V  N  V  H  W  S  *  I  H  L  W  R  Q  R  C  R  G  S  L  P  V  K  W  S  V  L  S  V  H  F  I  N  N  D  L  R  C  S  A  L  E  L  E  N  V  C  Q  A  L  L  K  V  F  F  S  T  *  D  R  C  S  V  E  *  R  P  T  S  R  T  E  *  A  R  F  S  S  A  S  E  D  K  S  R  E  T  E  L  T  K  Q  S  I  Q  S  R  S  F  D  K  D  T  S  S  S  *  T  *  *  *  H  Y  D  A  L  *  *  C  *  K  G  I  *  G  M  A  *  V  P  *  T  H  R  W  V  L  P  P  A  C  R  W  K  P  I  E  I  *  S  *  E  S  C  S  R  A  Q  W  I  Q  H  D  S  Y  R  S  C  L  H  G  Q  Q  N  G  F  R  K  V  L  E  Q  *  S  C  S  R  K  G  R  G  G  Q  A  F  Q  L  *  R  C  V  A  K  L  L  V  C  K  R  E  L  L  Q  Y  S  *  I  R  K  T  S  M  G  N  R  Y  F  K  V  F  W  R  C  N  *  P  E  Y  T  D  S  L  W  T  Q  K  Q  L  P  P  K  V  L  R  N  V  W  K  Y  </second_frame>
            <third_frame>   S  L  L  S  N  R  M  R  L  F  C  S  R  L  N  R  A  S  S  S  L  R  A  R  I  K  P  K  T  C  S  G  G  L  V  L  A  V  I  F  I  V  T  V  V  L  M  C  T  G  V  K  Y  I  Y  G  G  S  G  A  E  E  A  Y  P  L  N  G  Q  Y  S  Q  F  T  L  L  T  M  T  Y  D  A  R  L  W  N  L  K  M  Y  V  K  H  Y  S  R  C  S  S  V  R  E  I  V  V  V  W  N  K  G  Q  P  P  E  L  S  E  L  D  S  A  V  P  V  R  I  R  V  E  K  Q  N  S  L  N  N  R  F  K  V  D  P  L  I  K  T  R  A  V  L  E  L  D  D  D  I  M  M  P  C  D  D  V  E  R  G  F  K  V  W  R  E  Y  P  E  R  I  V  G  F  Y  P  R  L  A  D  G  N  P  L  K  Y  R  A  E  N  H  A  R  E  H  N  G  Y  N  M  I  L  T  G  A  A  F  M  D  S  K  M  A  F  E  K  Y  W  S  N  E  A  A  A  G  R  A  V  V  D  K  L  F  N  C  E  D  V  L  L  N  Y  L  Y  A  N  A  S  S  S  S  T  V  E  Y  V  K  P  A  W  A  I  D  T  S  K  F  S  G  V  A  I  S  R  N  T  Q  T  H  Y  G  L  R  S  S  C  L  Q  K  F  S  E  M  Y  G  S  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0143O06.1" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="132611" stop="131703"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>909</number_coding_nucleotides>
                  <number_encoded_amino_acids>303</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLLSNRMRLFCSRLNRASSSLRARIKPKTCSGGLVLAVIFIVTVVLMCTGVKYIYGGSGAEEAYPLNGQYSQFTLLTMTYDARLWNLKMYVKHYSRCSSVREIVVVWNKGQPPELSELDSAVPVRIRVEKQNSLNNRFKVDPLIKTRAVLELDDDIMMPCDDVERGFKVWREYPERIVGFYPRLADGNPLKYRAENHAREHNGYNMILTGAAFMDSKMAFEKYWSNEAAAGRAVVDKLFNCEDVLLNYLYANASSSSTVEYVKPAWAIDTSKFSGVAISRNTQTHYGLRSSCLQKFSEMYGSI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 26 chains have been computed
$ 
$ memory statistics:
$ 233928 bytes spliced alignments in total
$ 23 spliced alignments have been stored
$ 10170 bytes was the average size of a spliced alignment
$ 26744 bytes predicted gene locations in total
$ 16 predicted gene locations have been stored
$ 1671 bytes was the average size of a predicted gene location
$ 4 megabytes was the average size of the backtrace matrix
$ 27 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-18 05:48:28
-->
