SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 543 21.6 1.7 1.7 C11HBa0072I13.1 4646 4763 (126014) + Copia00172 Copia 5196 5313 (1314) 1 399 26.2 0.0 6.9 C11HBa0072I13.1 5470 5629 (125148) + SONATA2 Unknown 1 149 (104) 2 456 18.8 1.9 3.8 C11HBa0072I13.1 6496 6600 (124177) C TS Unknown (1) 160 58 3 4698 3.7 0.5 0.2 C11HBa0072I13.1 8517 9091 (121686) + Copia00003 Copia 4141 4717 (97) 4 940 20.0 3.8 0.9 C11HBa0072I13.1 10972 11183 (119594) + Copia00151 Copia 5510 5727 (5034) 5 1578 11.3 1.1 2.9 C11HBa0072I13.1 11430 11710 (119067) + Gypsy00163 Gypsy 7741 8016 (731) 6 600 9.0 11.4 8.2 C11HBa0072I13.1 12024 12181 (118596) + Gypsy00163 Gypsy 8020 8182 (565) 6 230 13.6 0.0 0.0 C11HBa0072I13.1 18094 18137 (112640) C HELITRON7_OS Unknown (8580) 1573 1530 7 284 34.0 5.4 5.4 C11HBa0072I13.1 22355 22801 (107976) + Unknown00043 Unknown 8680 9126 (2198) 8 433 25.9 2.9 2.2 C11HBa0072I13.1 23890 24027 (106750) C SHATAG_MT Unknown (1132) 2750 2612 9 539 32.1 5.9 3.7 C11HBa0072I13.1 24326 24816 (105961) + Unknown00043 Unknown 10121 10622 (702) 8 343 13.9 4.3 7.5 C11HBa0072I13.1 42147 42239 (88538) C Unknown00050 Unknown (1766) 3865 3776 10 406 28.0 1.1 4.4 C11HBa0072I13.1 42662 42844 (87933) C Unknown00050 Unknown (2148) 3483 3307 11 573 22.8 6.0 1.3 C11HBa0072I13.1 47877 48027 (82750) C SINE_SO Unknown (29) 160 3 12 3489 5.7 0.2 0.4 C11HBa0072I13.1 49502 49959 (80818) C Copia00107 Copia (2308) 729 273 13 387 23.9 2.2 5.1 C11HBa0072I13.1 52422 52558 (78219) C Unknown00024 Unknown (1136) 2183 2051 14 * 33294 3.9 0.1 0.1 C11HBa0072I13.1 52485 57339 (73438) C Copia00087 Copia (6) 4900 1 15 674 22.3 8.2 3.0 C11HBa0072I13.1 59261 59491 (71286) + TS2 Unknown 94 336 (319) 16 1158 23.6 3.0 2.0 C11HBa0072I13.1 66456 66757 (64020) + Copia00151 Copia 5511 5815 (4946) 17 590 17.3 1.7 5.1 C11HBa0072I13.1 67575 67751 (63026) C Unknown00025 Unknown (5841) 467 297 18 268 22.0 12.9 9.0 C11HBa0072I13.1 69824 69978 (60799) C Unknown00050 Unknown (1766) 3865 3705 19 974 24.9 5.3 1.7 C11HBa0072I13.1 70786 71087 (59690) + Copia00151 Copia 5516 5828 (4933) 20 259 17.0 4.0 5.0 C11HBa0072I13.1 77219 77317 (53460) + Gypsy00073 Gypsy 579 676 (11408) 21 * 2264 14.6 1.4 4.1 C11HBa0072I13.1 77245 77730 (53047) + Copia00110 Copia 13151 13623 (509) 22 743 17.1 12.0 5.8 C11HBa0072I13.1 77675 77916 (52861) + Gypsy00043 Gypsy 1066 1322 (12572) 23 * 12391 7.8 1.2 1.7 C11HBa0072I13.1 79977 81777 (49000) C Gypsy00006 Gypsy (5253) 2526 735 24 56919 4.7 0.3 0.4 C11HBa0072I13.1 82251 89302 (41475) C Gypsy00006 Gypsy (0) 7779 735 25 666 10.3 10.7 8.2 C11HBa0072I13.1 90013 90171 (40606) C Gypsy00163 Gypsy (565) 8182 8020 26 1221 13.2 2.5 3.7 C11HBa0072I13.1 90513 90755 (40022) C Gypsy00163 Gypsy (733) 8014 7775 26 957 13.8 2.4 8.3 C11HBa0072I13.1 92351 92555 (38222) C Unknown00046 Unknown (7983) 2061 1869 27 1100 23.4 1.9 2.3 C11HBa0072I13.1 93613 93915 (36862) C Unknown00013 Unknown (159) 3589 656 28 352 18.2 3.0 0.0 C11HBa0072I13.1 93894 93959 (36818) C Unknown00014 Unknown (1842) 728 661 29 * 812 19.7 2.6 1.6 C11HBa0072I13.1 93957 94147 (36630) C Unknown00014 Unknown (1845) 725 533 30 9829 12.9 2.8 4.0 C11HBa0072I13.1 95208 97008 (33769) C Copia00042 Copia (3263) 1780 1 31 313 6.2 1.2 0.0 C11HBa0072I13.1 97554 97633 (33144) + GYCUME1_LTR Unknown 376 456 (2190) 32 266 6.8 1.3 7.6 C11HBa0072I13.1 97566 97644 (33133) C MUDSOLT1 Unknown (3825) 517 444 33 * 607 19.7 5.2 1.3 C11HBa0072I13.1 99793 99946 (30831) C Copia00151 Copia (2380) 8381 8222 34 599 23.2 3.1 0.5 C11HBa0072I13.1 100694 100888 (29889) + Copia00175 Copia 2336 2535 (4511) 35 284 19.8 1.8 1.5 C11HBa0072I13.1 103174 103339 (27438) C Unknown00049 Unknown (0) 1709 446 36 246 14.7 0.0 3.9 C11HBa0072I13.1 105444 105521 (25256) C Gypsy00178 Gypsy (2501) 6590 6516 37 * 313 5.3 1.3 0.0 C11HBa0072I13.1 105455 105530 (25247) C GYCUME1_LTR Unknown (2194) 452 376 38 * 330 9.0 0.0 0.0 C11HBa0072I13.1 105473 105550 (25227) + Copia00181 Copia 1816 1893 (343) 39 271 9.5 7.0 2.3 C11HBa0072I13.1 105474 105559 (25218) + MUDSOLT1 Unknown 468 557 (3785) 40 * 14165 6.0 0.5 3.3 C11HBa0072I13.1 105730 107678 (23099) C Gypsy00073 Gypsy (7296) 4788 2896 41 440 25.8 4.7 0.8 C11HBa0072I13.1 111597 111725 (19052) C Copia00151 Copia (1090) 9671 9538 42 4038 6.3 2.2 5.6 C11HBa0072I13.1 115465 116104 (14673) + Copia00155 Copia 4795 5412 (90) 43 * 40789 3.0 0.6 0.1 C11HBa0072I13.1 116104 120950 (9827) C Copia00046 Copia (312) 4867 1 44 36487 2.9 0.3 1.0 C11HBa0072I13.1 117305 120972 (9805) + Copia00155 Copia 1130 4768 (734) 45 7526 4.9 1.1 2.0 C11HBa0072I13.1 120973 121985 (8792) C TONT1_LE_LTR Unknown (0) 1004 1 46 1076 16.2 10.5 0.0 C11HBa0072I13.1 122360 122588 (8189) C SONATA2 Unknown (0) 253 1 47 607 4.8 0.0 0.0 C11HBa0072I13.1 122612 122694 (8083) C Copia00005 Copia (4808) 83 1 48 1304 11.9 2.4 4.0 C11HBa0072I13.1 122823 123075 (7702) + Unknown00035 Unknown 1 249 (2632) 49 * 39744 3.6 0.8 0.3 C11HBa0072I13.1 123003 127872 (2905) C Copia00005 Copia (0) 4891 1 50 3039 8.7 7.2 1.1 C11HBa0072I13.1 127982 128456 (2321) C Copia00168 Copia (1) 4655 4152 51