SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 384 24.1 2.9 2.2 C11HBa0139J14.2 1176 1311 (116831) + Copia00151 Copia 9529 9665 (1096) 1 359 24.5 5.7 0.0 C11HBa0139J14.2 1367 1472 (116670) + Copia00143 Copia 91 202 (5102) 2 251 15.2 0.0 4.2 C11HBa0139J14.2 1469 1516 (116626) C Copia00172 Copia (6108) 519 474 3 * 1069 14.4 1.0 2.0 C11HBa0139J14.2 1735 1932 (116210) C Copia00172 Copia (6147) 480 285 3 345 15.7 8.6 4.7 C11HBa0139J14.2 1997 2101 (116041) C Copia00125 Copia (72) 3877 2697 4 610 18.5 0.0 0.0 C11HBa0139J14.2 2124 2231 (115911) C Copia00125 Copia (1079) 2986 2879 5 1071 16.5 1.0 2.0 C11HBa0139J14.2 3209 3406 (114736) C Copia00172 Copia (6147) 480 285 3 400 32.9 5.6 6.0 C11HBa0139J14.2 5189 5705 (112437) + Unknown00043 Unknown 10335 10849 (475) 6 247 17.6 3.9 0.0 C11HBa0139J14.2 7705 7755 (110387) + Copia00151 Copia 10118 10170 (591) 7 353 33.5 4.3 4.1 C11HBa0139J14.2 7959 8372 (109770) + Unknown00057 Unknown 478 892 (2734) 8 229 12.8 2.6 0.0 C11HBa0139J14.2 8390 8428 (109714) + WHAM1_TM_I Unknown 595 634 (6109) 9 230 21.2 0.0 0.0 C11HBa0139J14.2 11537 11602 (106540) C Gypsy00202 Gypsy (12092) 2343 2278 10 1112 10.4 0.7 0.0 C11HBa0139J14.2 14416 14569 (103573) C Copia00143 Copia (5102) 202 48 11 932 12.8 0.7 0.7 C11HBa0139J14.2 14630 14771 (103371) C Copia00143 Copia (5086) 218 77 12 978 22.3 2.5 0.0 C11HBa0139J14.2 17132 17328 (100814) + Copia00089 Copia 6919 7120 (4336) 13 531 22.2 0.8 1.7 C11HBa0139J14.2 24149 24267 (93875) C Copia00172 Copia (1315) 5312 5195 14 418 25.9 3.8 5.9 C11HBa0139J14.2 30843 31080 (87062) C Gypsy00202 Gypsy (6420) 8015 7783 15 579 27.8 3.5 1.8 C11HBa0139J14.2 32854 33080 (85062) C SONATA1 Unknown (12) 231 1 16 840 21.3 17.2 0.4 C11HBa0139J14.2 36092 36341 (81801) C TLP1 Unknown (0) 662 371 17 286 17.7 0.9 3.3 C11HBa0139J14.2 38545 38614 (79528) C SOD_SINE Unknown (27) 134 67 18 238 10.0 1.4 16.7 C11HBa0139J14.2 44177 44248 (73894) C Copia00151 Copia (1998) 8763 8703 19 532 21.3 0.6 7.4 C11HBa0139J14.2 44714 44875 (73267) C Copia00151 Copia (2390) 8371 8221 20 686 22.1 2.2 0.0 C11HBa0139J14.2 59850 59985 (58157) + TS2 Unknown 516 654 (1) 21 275 27.9 8.3 3.7 C11HBa0139J14.2 63647 63754 (54388) + Unknown00043 Unknown 1927 2039 (9285) 22 232 20.4 0.0 0.0 C11HBa0139J14.2 67273 67316 (50826) C CLOUD-7 Unknown (399) 96 53 23 321 34.0 0.9 0.0 C11HBa0139J14.2 82449 82554 (35588) + SOD_SINE Unknown 87 193 (52) 24 435 27.5 0.8 0.8 C11HBa0139J14.2 89344 89464 (28678) + Copia00172 Copia 5193 5313 (1314) 25 294 23.4 0.0 7.8 C11HBa0139J14.2 90377 90478 (27664) + TS2 Unknown 264 357 (298) 26 284 27.2 4.8 8.5 C11HBa0139J14.2 91213 91505 (26637) C TLP1 Unknown (380) 282 1 27 * 328 24.1 0.0 1.1 C11HBa0139J14.2 91423 91510 (26632) + HATSOD1 Unknown 4706 4792 (0) 28 1152 15.4 2.2 0.9 C11HBa0139J14.2 93535 93757 (24385) C SONATA2 Unknown (27) 226 1 29 246 18.2 0.0 0.0 C11HBa0139J14.2 94163 94206 (23936) + Copia00151 Copia 10464 10507 (254) 30 877 19.0 3.3 1.4 C11HBa0139J14.2 94625 94838 (23304) C SONATA2 Unknown (27) 226 9 31 307 21.2 2.4 3.6 C11HBa0139J14.2 96728 96810 (21332) + Unknown00043 Unknown 1933 2014 (9310) 32 325 12.2 0.0 0.0 C11HBa0139J14.2 97823 97871 (20271) + Unknown00034 Unknown 1536 1584 (7493) 33 512 15.4 32.7 0.0 C11HBa0139J14.2 97936 98091 (20051) + Unknown00034 Unknown 1566 1772 (7305) 33 268 27.0 1.1 1.1 C11HBa0139J14.2 99462 99551 (18591) + Unknown00034 Unknown 5142 5231 (3846) 34 285 22.4 0.0 0.0 C11HBa0139J14.2 100483 100549 (17593) + Unknown00034 Unknown 5139 5205 (3872) 35 228 11.4 0.0 13.7 C11HBa0139J14.2 101849 101899 (16243) + COPIA4_I_MT Unknown 3574 3617 (4765) 36 318 10.8 12.0 1.3 C11HBa0139J14.2 108047 108121 (10021) C Gypsy00073 Gypsy (10978) 1106 1024 37 * 1308 15.6 7.5 5.2 C11HBa0139J14.2 108061 108405 (9737) C Copia00110 Copia (513) 13619 13267 38 577 23.4 10.3 9.4 C11HBa0139J14.2 108141 108556 (9586) + Unknown00019 Unknown 151 706 (13926) 39 * 721 13.4 0.0 0.7 C11HBa0139J14.2 108557 108691 (9451) C Copia00110 Copia (840) 13292 13159 40