SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 230 23.9 9.0 1.8 C11HBa0249E07.1 2852 2962 (125690) C Copia00151 Copia (627) 10134 10016 1 1211 23.4 4.6 4.6 C11HBa0249E07.1 10338 10798 (117854) C Gypsy00073 Gypsy (10687) 1397 937 2 * 2264 14.3 0.2 1.2 C11HBa0249E07.1 10570 10972 (117680) C Copia00110 Copia (573) 13559 13161 3 681 27.2 5.5 4.4 C11HBa0249E07.1 17974 18246 (110406) C TS2 Unknown (318) 337 62 4 537 11.9 7.4 6.7 C11HBa0249E07.1 18732 18866 (109786) C Unknown00030 Unknown (54) 1412 1277 5 2269 8.5 6.1 0.0 C11HBa0249E07.1 19477 19805 (108847) + Unknown00034 Unknown 3680 4028 (5049) 6 752 6.1 0.0 0.0 C11HBa0249E07.1 20088 20186 (108466) + Unknown00030 Unknown 1285 1383 (83) 7 1041 15.6 2.9 8.8 C11HBa0249E07.1 22837 23085 (105567) + Copia00039 Copia 264 1041 (3509) 8 285 18.0 17.2 4.7 C11HBa0249E07.1 23114 23241 (105411) C Copia00113 Copia (7209) 5197 5054 9 1083 15.6 4.1 5.0 C11HBa0249E07.1 23247 23486 (105166) C Copia00039 Copia (3514) 1036 261 10 395 26.8 1.3 2.6 C11HBa0249E07.1 27222 27374 (101278) + Copia00151 Copia 8207 8357 (2404) 11 442 17.8 5.0 0.0 C11HBa0249E07.1 27803 27903 (100749) C Gypsy00193 Gypsy (11865) 1655 1550 12 * 3483 18.1 4.1 1.2 C11HBa0249E07.1 27814 28550 (100102) + GYPSOL2_LTR Unknown 823 1580 (0) 13 17000 17.7 0.9 1.1 C11HBa0249E07.1 28559 31712 (96940) C Gypsy00202 Gypsy (772) 13663 10516 14 9101 16.1 1.6 1.5 C11HBa0249E07.1 31705 33751 (94901) C Gypsy00142 Gypsy (5998) 2067 21 15 * 15033 18.6 2.3 1.2 C11HBa0249E07.1 32173 35354 (93298) C Unknown00038 Unknown (5703) 3404 188 16 948 19.7 0.0 4.0 C11HBa0249E07.1 35355 35555 (93097) + HarbN_I Unknown 12 204 (1) 17 234 4.8 0.0 0.0 C11HBa0249E07.1 35648 35689 (92963) + VANDAL13 Unknown 7629 7670 (4477) 18 287 29.8 4.8 3.2 C11HBa0249E07.1 36548 36672 (91980) + Unknown00043 Unknown 1913 2039 (9285) 19 236 15.4 0.0 0.0 C11HBa0249E07.1 36891 36929 (91723) + SOD_SINE Unknown 83 121 (124) 20 520 21.9 0.9 1.7 C11HBa0249E07.1 37094 37209 (91443) + Copia00172 Copia 5199 5313 (1314) 21 8691 8.7 1.6 7.5 C11HBa0249E07.1 46130 47589 (81063) + Gypsy00201 Gypsy 5123 6496 (0) 22 * 10392 10.5 2.8 6.1 C11HBa0249E07.1 46306 48148 (80504) C Gypsy00069 Gypsy (2539) 3474 1693 23 913 15.2 8.7 0.6 C11HBa0249E07.1 55334 55505 (73147) C Copia00172 Copia (5337) 1290 1105 24 644 25.3 5.4 6.0 C11HBa0249E07.1 57901 58322 (70330) C Unknown00043 Unknown (28) 2018 206 25 344 12.8 1.1 1.1 C11HBa0249E07.1 61311 61397 (67255) + Gypsy00046 Gypsy 4069 4155 (6916) 26 * 353 12.5 1.2 0.0 C11HBa0249E07.1 61334 61413 (67239) C GYCUME1_LTR Unknown (2215) 431 351 27 625 25.1 0.0 0.0 C11HBa0249E07.1 62234 62396 (66256) + SONATA2 Unknown 6 168 (85) 28 2177 10.9 5.0 0.0 C11HBa0249E07.1 65540 65877 (62775) + Unknown00034 Unknown 3663 4017 (5060) 29 929 8.3 2.7 2.7 C11HBa0249E07.1 65745 65892 (62760) C Copia00094 Copia (1144) 4465 4318 30 * 269 13.2 3.7 1.9 C11HBa0249E07.1 67886 67939 (60713) + Copia00162 Copia 4270 4324 (0) 31 29840 4.1 0.4 0.3 C11HBa0249E07.1 68101 71736 (56916) + Copia00162 Copia 1 3639 (685) 32 425 13.8 3.0 6.0 C11HBa0249E07.1 71715 71814 (56838) + Copia00162 Copia 4228 4324 (0) 32 * 595 7.6 0.0 0.0 C11HBa0249E07.1 71818 71909 (56743) + Gypsy00042 Gypsy 5958 6049 (1449) 33 284 10.0 0.0 3.9 C11HBa0249E07.1 72712 72763 (55889) + Copia00039 Copia 955 1004 (3546) 34 231 5.2 0.0 23.7 C11HBa0249E07.1 72714 72789 (55863) C Copia00039 Copia (3535) 1015 958 34 * 337 3.8 0.0 0.0 C11HBa0249E07.1 72812 72890 (55762) C GYCUME1_LTR Unknown (2204) 442 364 35 307 11.7 3.6 0.9 C11HBa0249E07.1 72820 72931 (55721) C Copia00105 Copia (1325) 7532 7418 36 * 344 10.5 0.0 0.0 C11HBa0249E07.1 76231 76306 (52346) + HELMET3 Unknown 3701 3776 (2797) 37 282 10.0 0.0 0.0 C11HBa0249E07.1 76248 76317 (52335) C Copia00181 Copia (366) 1870 1801 38 * 263 14.7 16.1 3.1 C11HBa0249E07.1 76456 76553 (52099) C Copia00113 Copia (4080) 5214 378 39 788 11.7 8.3 0.0 C11HBa0249E07.1 76591 76735 (51917) C Copia00039 Copia (4132) 418 262 40 305 9.0 2.4 1.3 C11HBa0249E07.1 78687 78710 (49942) + GYCUME1_LTR Unknown 385 839 (2525) 41 301 1.6 0.0 1.6 C11HBa0249E07.1 78711 78772 (49880) + Gypsy00046 Gypsy 4078 4138 (6933) 42 * 317 0.0 0.0 0.0 C11HBa0249E07.1 78718 78775 (49877) C Copia00181 Copia (366) 1870 1813 43 305 9.0 2.4 1.3 C11HBa0249E07.1 78776 78790 (49862) + GYCUME1_LTR Unknown 840 1116 (2248) 41 603 25.3 1.2 0.0 C11HBa0249E07.1 79576 79741 (48911) + SONATA2 Unknown 1 168 (85) 44 65958 7.4 1.8 0.7 C11HBa0249E07.1 82363 91211 (37441) + Gypsy00073 Gypsy 2896 11846 (238) 45 567 4.7 1.0 0.0 C11HBa0249E07.1 91253 91403 (37249) + HELITRON7_OS Unknown 375 1673 (2200) 46 236 5.3 2.6 0.0 C11HBa0249E07.1 91336 91411 (37241) + Copia00105 Copia 7473 7550 (1307) 47 * 1021 15.4 1.5 2.5 C11HBa0249E07.1 93047 93246 (35406) + Copia00039 Copia 268 465 (4085) 48 1239 15.6 5.1 2.8 C11HBa0249E07.1 93252 93566 (35086) C Copia00039 Copia (4072) 5353 264 49 601 25.0 0.9 0.9 C11HBa0249E07.1 93613 93822 (34830) + SONATA2 Unknown 8 217 (36) 50 299 18.0 15.5 6.3 C11HBa0249E07.1 94660 94801 (33851) C Copia00063 Copia (3746) 170 16 51 25135 2.7 0.1 0.0 C11HBa0249E07.1 94936 98673 (29979) C Copia00013 Copia (0) 3741 1 52 927 5.7 0.0 0.0 C11HBa0249E07.1 98643 98764 (29888) + Copia00053 Copia 4950 5071 (2) 53 * 242 17.5 1.5 3.1 C11HBa0249E07.1 98751 98815 (29837) C Copia00008 Copia (24) 5110 5047 54 * 1339 9.1 0.9 2.4 C11HBa0249E07.1 100803 101015 (27637) + Gypsy00073 Gypsy 11874 12083 (1) 55 2497 6.3 1.0 1.8 C11HBa0249E07.1 101182 101567 (27085) + Gypsy00073 Gypsy 1 383 (11701) 56 61484 8.8 1.4 2.8 C11HBa0249E07.1 101896 110969 (17683) C Gypsy00073 Gypsy (242) 11842 2895 57 309 7.0 7.0 0.0 C11HBa0249E07.1 112239 112309 (16343) + HELMET3 Unknown 3701 3776 (2797) 58 241 11.3 0.0 0.0 C11HBa0249E07.1 112256 112317 (16335) C Copia00181 Copia (374) 1862 1801 59 * 605 16.7 9.9 11.4 C11HBa0249E07.1 112522 112764 (15888) + Copia00039 Copia 809 1108 (3442) 60 * 1307 11.6 0.5 1.0 C11HBa0249E07.1 112619 112819 (15833) C Copia00039 Copia (4084) 466 267 61 267 4.2 2.1 0.0 C11HBa0249E07.1 112811 112858 (15794) + MuDR1_HV Unknown 1244 1292 (5168) 62 * 266 8.3 0.0 0.0 C11HBa0249E07.1 112820 112867 (15785) C Gypsy00178 Gypsy (2537) 6554 6507 63 * 233 9.3 0.0 0.0 C11HBa0249E07.1 114817 114859 (13793) + Gypsy00046 Gypsy 4073 4115 (6956) 64 650 25.1 0.0 0.0 C11HBa0249E07.1 115805 115967 (12685) + SONATA2 Unknown 6 168 (85) 65 296 7.0 5.7 2.3 C11HBa0249E07.1 118925 119012 (9640) C Copia00181 Copia (329) 1907 1817 66 296 3.8 0.0 1.2 C11HBa0249E07.1 118953 119032 (9620) C GYCUME1_LTR Unknown (2220) 426 348 67 2189 12.8 3.2 0.0 C11HBa0249E07.1 119137 119480 (9172) + Unknown00034 Unknown 3669 4023 (5054) 68 2193 9.2 3.1 1.1 C11HBa0249E07.1 119634 120011 (8641) + Unknown00034 Unknown 1 4017 (5060) 69 2519 4.8 2.4 2.6 C11HBa0249E07.1 120294 120674 (7978) C Gypsy00073 Gypsy (11704) 380 1 70 1166 13.9 0.0 0.5 C11HBa0249E07.1 120847 121041 (7611) C Gypsy00073 Gypsy (6) 12078 11885 71 1674 16.8 7.5 5.8 C11HBa0249E07.1 122236 122646 (6006) + Copia00110 Copia 1880 2297 (11835) 72 8547 15.9 3.4 2.1 C11HBa0249E07.1 122651 124292 (4360) C Unknown00034 Unknown (5415) 3662 2001 73 7856 9.9 2.6 8.4 C11HBa0249E07.1 123087 124456 (4196) C Gypsy00096 Gypsy (0) 5510 4220 74 * 4659 7.8 0.4 5.5 C11HBa0249E07.1 124472 125165 (3487) C Unknown00040 Unknown (108) 4574 3916 75