SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 1862 14.4 0.0 0.0 C11HBa0245M17.2 1985 2275 (135371) C Copia00110 Copia (11433) 2699 2409 1 1908 13.2 3.3 1.0 C11HBa0245M17.2 3012 3318 (134328) C Unknown00034 Unknown (5058) 4019 3706 2 1487 12.6 2.4 0.0 C11HBa0245M17.2 4096 4342 (133304) + SONATA2 Unknown 1 253 (0) 3 1472 14.0 1.2 0.4 C11HBa0245M17.2 4403 4653 (132993) + SONATA2 Unknown 1 253 (0) 4 302 25.7 1.9 2.8 C11HBa0245M17.2 4715 4822 (132824) + SONATA2 Unknown 1 107 (146) 5 454 23.9 2.5 1.7 C11HBa0245M17.2 5392 5510 (132136) C Copia00143 Copia (4622) 682 563 6 457 28.7 8.2 6.2 C11HBa0245M17.2 5572 6057 (131589) + Gypsy00007 Gypsy 5635 6130 (365) 7 * 595 26.1 9.8 6.5 C11HBa0245M17.2 5738 6106 (131540) C Copia00191 Copia (542) 4184 3804 8 361 28.3 0.9 0.0 C11HBa0245M17.2 6252 6357 (131289) + Copia00205 Copia 5226 5332 (4924) 9 305 31.6 1.9 2.5 C11HBa0245M17.2 6564 6722 (130924) + Copia00205 Copia 5487 5644 (4612) 9 1417 12.6 0.4 0.0 C11HBa0245M17.2 6791 7020 (130626) C SONATA1 Unknown (1) 242 12 10 243 31.8 1.3 2.0 C11HBa0245M17.2 7196 7346 (130300) C Gypsy00194 Gypsy (886) 8220 8071 11 1489 14.1 0.4 0.0 C11HBa0245M17.2 7412 7652 (129994) C SONATA1 Unknown (1) 242 1 12 481 22.7 0.8 4.0 C11HBa0245M17.2 8232 8355 (129291) C Copia00112 Copia (8710) 177 58 13 298 21.8 9.7 2.6 C11HBa0245M17.2 8260 8372 (129274) C Unknown00046 Unknown (9523) 521 401 14 * 740 17.5 3.1 7.3 C11HBa0245M17.2 8456 8646 (129000) + Gypsy00043 Gypsy 12848 13030 (864) 15 525 13.2 1.1 1.1 C11HBa0245M17.2 10891 10982 (126664) + Gypsy00043 Gypsy 1846 1937 (11957) 16 341 14.4 1.6 4.9 C11HBa0245M17.2 12641 12718 (124928) + Gypsy00043 Gypsy 626 4238 (4310) 17 306 7.1 12.5 0.0 C11HBa0245M17.2 12676 12731 (124915) C Gypsy00049 Gypsy (2883) 11647 11585 18 * 1007 26.0 3.8 3.6 C11HBa0245M17.2 12856 13246 (124400) + Copia00145 Copia 9298 9689 (2730) 19 235 23.6 8.5 6.3 C11HBa0245M17.2 13160 13430 (124216) + Gypsy00074 Gypsy 426 702 (13389) 20 * 1135 27.2 1.7 2.9 C11HBa0245M17.2 13468 13876 (123770) + Copia00145 Copia 10146 10549 (1870) 19 326 22.2 2.3 5.8 C11HBa0245M17.2 14028 14113 (123533) + Gypsy00173 Gypsy 641 723 (4291) 21 472 19.0 5.9 1.0 C11HBa0245M17.2 14185 14285 (123361) + Copia00145 Copia 10873 10978 (1441) 19 452 26.0 8.8 9.6 C11HBa0245M17.2 14685 15194 (122452) + Gypsy00043 Gypsy 12302 12807 (1087) 22 662 20.6 3.1 7.2 C11HBa0245M17.2 15269 15462 (122184) + Gypsy00043 Gypsy 12845 13030 (864) 22 1387 16.0 2.5 0.0 C11HBa0245M17.2 16964 17201 (120445) + Unknown00034 Unknown 3776 4019 (5058) 23 1926 13.5 4.5 0.0 C11HBa0245M17.2 17230 17541 (120105) C Copia00110 Copia (11398) 2734 2409 24 5058 13.9 5.6 1.3 C11HBa0245M17.2 17582 18631 (119015) C POTTEN1 Unknown (0) 3524 66 25 32982 7.2 1.4 1.2 C11HBa0245M17.2 20578 25540 (112106) + Copia00189 Copia 2 5394 (863) 26 737 20.4 2.3 6.9 C11HBa0245M17.2 25651 25866 (111780) + Gypsy00043 Gypsy 12845 13050 (844) 27 310 6.1 1.1 0.0 C11HBa0245M17.2 26477 26557 (111089) C Copia00181 Copia (363) 7551 1808 28 41664 8.4 1.1 2.5 C11HBa0245M17.2 26559 32547 (105099) C Gypsy00073 Gypsy (238) 11846 5943 29 * 48541 1.3 0.2 0.5 C11HBa0245M17.2 28537 34865 (102781) + Gypsy00023 Gypsy 1 5331 (0) 30 508 14.9 1.1 1.1 C11HBa0245M17.2 36355 36449 (101197) + Gypsy00043 Gypsy 1843 1937 (11957) 31 328 16.1 1.6 4.9 C11HBa0245M17.2 38295 38372 (99274) + Gypsy00043 Gypsy 626 4238 (4310) 32 247 14.0 14.0 0.0 C11HBa0245M17.2 38328 38384 (99262) C Gypsy00049 Gypsy (2881) 11649 11585 33 * 1067 27.3 5.4 4.4 C11HBa0245M17.2 38545 39065 (98581) + Copia00145 Copia 9323 9848 (2571) 34 1151 26.3 3.0 2.5 C11HBa0245M17.2 39131 39532 (98114) + Copia00145 Copia 10146 10549 (1870) 34 357 19.5 0.2 10.8 C11HBa0245M17.2 39667 39770 (97876) + Gypsy00173 Gypsy 641 4237 (4291) 35 473 19.1 2.5 5.0 C11HBa0245M17.2 39848 39968 (97678) + Copia00145 Copia 10741 10858 (1561) 34 418 24.5 8.4 9.1 C11HBa0245M17.2 40249 40665 (96981) + Gypsy00043 Gypsy 12382 12795 (1099) 36 724 20.9 2.3 6.9 C11HBa0245M17.2 40760 40975 (96671) + Gypsy00043 Gypsy 12845 13050 (844) 36 233 10.6 0.0 0.0 C11HBa0245M17.2 41648 41694 (95952) C MUDSOLT1 Unknown (3839) 503 457 37 12164 7.2 2.7 0.4 C11HBa0245M17.2 43196 44871 (92775) + Copia00112 Copia 3680 5395 (3492) 38 285 22.4 9.4 8.2 C11HBa0245M17.2 46652 46821 (90825) + SONATA1 Unknown 13 184 (59) 39 244 6.5 0.0 0.0 C11HBa0245M17.2 47057 47087 (90559) + Unknown00011 Unknown 7338 7368 (127) 40 974 11.3 1.9 1.9 C11HBa0245M17.2 47103 47264 (90382) + LycEPRV_I Unknown 7355 7516 (5) 41 768 3.9 0.0 1.9 C11HBa0245M17.2 47271 47375 (90271) + LycEPRV_LTR Unknown 78 180 (5) 42 351 20.0 3.0 6.1 C11HBa0245M17.2 51408 51604 (86042) C Gypsy00205 Gypsy (8839) 2473 2283 43 * 368 15.8 7.8 6.2 C11HBa0245M17.2 51578 51705 (85941) C Gypsy00205 Gypsy (8867) 2445 2316 43 331 12.6 14.7 5.5 C11HBa0245M17.2 53739 53847 (83799) C TOTO1_LP_I Unknown (410) 3119 3001 44 37580 0.0 0.0 0.0 C11HBa0245M17.2 54323 58460 (79186) + Copia00044 Copia 1 4138 (0) 45 266 20.7 9.0 7.4 C11HBa0245M17.2 58451 58704 (78942) C COPI2_LTR Unknown (51) 3258 185 46 * 1459 14.7 1.2 0.0 C11HBa0245M17.2 59807 60051 (77595) + Copia00176 Copia 1356 1603 (1532) 47 1335 14.4 0.9 0.0 C11HBa0245M17.2 60153 60374 (77272) C Copia00003 Copia (4537) 277 54 48 972 13.6 6.4 0.9 C11HBa0245M17.2 60376 60672 (76974) C Copia00003 Copia (97) 4717 4339 49 8273 14.4 2.8 0.4 C11HBa0245M17.2 63875 65272 (72374) C Copia00005 Copia (3459) 1432 1 50 913 15.3 9.9 1.4 C11HBa0245M17.2 65385 65596 (72050) C Copia00168 Copia (2) 4654 4425 51 9432 15.0 3.4 1.1 C11HBa0245M17.2 67659 69322 (68324) + TORTL1 Unknown 1 1702 (7993) 52 * 73280 0.0 0.0 0.0 C11HBa0245M17.2 68431 76498 (61148) + Copia00043 Copia 1 8069 (0) 53 4397 16.0 5.4 1.7 C11HBa0245M17.2 76188 77083 (60563) + TORTL1 Unknown 8762 9690 (5) 54 * 1826 5.2 0.0 0.9 C11HBa0245M17.2 78028 78258 (59388) + Gypsy00003 Gypsy 5074 5302 (3091) 55 * 24510 10.5 3.4 3.6 C11HBa0245M17.2 78258 83470 (54176) C Unknown00037 Unknown (5) 4448 2 56 8118 2.5 0.1 0.2 C11HBa0245M17.2 87201 88161 (49485) + Unknown00008 Unknown 2514 3473 (980) 57 1757 5.5 0.0 1.7 C11HBa0245M17.2 88275 88512 (49134) + Unknown00008 Unknown 3474 3707 (746) 57 * 5547 17.6 1.4 3.4 C11HBa0245M17.2 88496 89632 (48014) + Gypsy00063 Gypsy 6185 7298 (3628) 58 * 40504 4.2 1.0 1.2 C11HBa0245M17.2 88701 95840 (41806) + Unknown00008 Unknown 1 4836 (0) 59 225 16.4 2.6 4.0 C11HBa0245M17.2 102325 102400 (35246) C VANDAL13 Unknown (4479) 7668 7594 60 611 24.1 2.4 6.8 C11HBa0245M17.2 110571 110819 (26827) + TS2 Unknown 122 359 (296) 61 475 16.5 3.0 4.0 C11HBa0245M17.2 111020 111120 (26526) + TS Unknown 58 157 (4) 62 851 9.7 0.0 0.0 C11HBa0245M17.2 119939 120062 (17584) + Copia00198 Copia 655 778 (7578) 63 931 24.1 2.3 3.0 C11HBa0245M17.2 120487 120785 (16861) + Unknown00020 Unknown 77 373 (4832) 64 382 20.6 2.0 0.0 C11HBa0245M17.2 120704 120805 (16841) + Copia00110 Copia 2715 2818 (11314) 65 * 267 9.6 0.0 1.9 C11HBa0245M17.2 120852 120904 (16742) C Unknown00049 Unknown (7322) 1709 1658 66 269 10.0 0.0 3.9 C11HBa0245M17.2 120912 120963 (16683) C Unknown00049 Unknown (7322) 1709 1660 66 303 6.8 0.0 0.0 C11HBa0245M17.2 121359 121402 (16244) + Unknown00049 Unknown 1666 1709 (7322) 67 270 9.3 0.0 0.0 C11HBa0245M17.2 121420 121462 (16184) + Unknown00049 Unknown 1667 1709 (7322) 67 236 28.8 0.0 0.0 C11HBa0245M17.2 132932 133004 (4642) C Unknown00034 Unknown (5282) 3795 3723 68 228 30.3 1.0 1.0 C11HBa0245M17.2 133005 133031 (4615) + Copia00094 Copia 4474 4573 (1036) 69 812 29.4 1.6 2.6 C11HBa0245M17.2 133226 133532 (4114) + Copia00172 Copia 3527 3830 (2797) 70 2123 12.2 1.0 0.0 C11HBa0245M17.2 136765 137076 (570) C Unknown00034 Unknown (5059) 4018 3704 71