##gff-version 3
##sequence-region C11HBa0029C01.1 1 122034
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	651	858	1471	+	0	ID=Contig1216_alignment_1;Target=Contig1216 1 208 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	2014	2121	604	-	0	ID=Contig1268_alignment_1;Target=Contig1268 5 113 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	3131	3390	1085	-	0	ID=Contig563_alignment_1;Target=Contig563 346 638 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	5840	6037	843	-	0	ID=Contig746_alignment_1;Target=Contig746 4 194 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	5908	6323	718	-	0	ID=Contig104_alignment_1;Target=Contig104 3285 3699 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	6665	6808	345	+	0	ID=Contig104_alignment_2;Target=Contig104 3262 3404 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	6665	6763	350	+	0	ID=Contig104_alignment_3;Target=Contig104 3357 3456 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	7336	7626	2030	-	0	ID=Contig358_alignment_1;Target=Contig358 2 312 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	9666	9942	433	+	0	ID=Contig386_alignment_1;Target=Contig386 16 317 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	9855	9948	538	+	0	ID=Contig151_alignment_1;Target=Contig151 398 491 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	12076	12724	2685	-	0	ID=Contig406_alignment_1;Target=Contig406 84 764 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	13138	13380	1433	+	0	ID=Contig646_alignment_1;Target=Contig646 1 243 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	16742	16824	305	+	0	ID=Contig579_alignment_1;Target=Contig579 323 402 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	17499	17804	408	-	0	ID=Contig1886_alignment_1;Target=Contig1886 178 484 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	17666	17886	1202	-	0	ID=Contig488_alignment_1;Target=Contig488 2 223 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	18146	18468	1321	-	0	ID=Contig23_alignment_1;Target=Contig23 449 774 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	19718	19896	1462	+	0	ID=Contig5_alignment_1;Target=Contig5 3162 3340 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	19893	21103	10041	+	0	ID=Contig5_alignment_2;Target=Contig5 3426 4638 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	20849	23354	19651	+	0	ID=Contig5_alignment_3;Target=Contig5 82 2597 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	23351	23941	4983	+	0	ID=Contig5_alignment_4;Target=Contig5 2742 3340 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	25531	25584	278	-	0	ID=hind_R%3D6150_alignment_1;Target=hind_R%3D6150 361 414 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	25540	25610	285	+	0	ID=Contig2585_alignment_1;Target=Contig2585 397 479 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	27318	28131	6058	-	0	ID=Contig1295_alignment_1;Target=Contig1295 1 814 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	28209	29581	9511	-	0	ID=Contig495_alignment_1;Target=Contig495 1 1375 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	30374	31896	10934	-	0	ID=Contig1215_alignment_1;Target=Contig1215 1 1536 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	30374	31258	6638	-	0	ID=Contig1215_alignment_2;Target=Contig1215 643 1536 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	34500	34692	704	-	0	ID=Contig1202_alignment_1;Target=Contig1202 33 227 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	37450	37519	276	-	0	ID=Contig2561_alignment_1;Target=Contig2561 236 304 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	37464	37533	281	+	0	ID=Contig2561_alignment_2;Target=Contig2561 244 314 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	37925	38160	1816	-	0	ID=Contig1193_alignment_1;Target=Contig1193 1 240 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	38141	38546	2513	-	0	ID=Contig26_alignment_1;Target=Contig26 10 405 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	38364	40053	13387	-	0	ID=Contig382_alignment_1;Target=Contig382 1 1666 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	39542	40439	7077	+	0	ID=Contig427_alignment_1;Target=Contig427 1506 2402 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	40428	43615	24267	+	0	ID=Contig104_alignment_4;Target=Contig104 1 3189 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	43149	43815	5726	-	0	ID=Contig1193_alignment_2;Target=Contig1193 1 668 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	43818	44212	2993	-	0	ID=Contig26_alignment_2;Target=Contig26 1 408 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	44060	44601	4127	-	0	ID=Contig382_alignment_2;Target=Contig382 1110 1649 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	45261	45445	977	+	0	ID=Contig1279_alignment_1;Target=Contig1279 915 1100 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	45513	45998	3112	+	0	ID=Contig1128_alignment_1;Target=Contig1128 1 488 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	45993	46224	1529	+	0	ID=Contig1128_alignment_2;Target=Contig1128 583 814 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	46036	47908	13698	-	0	ID=Contig369_alignment_1;Target=Contig369 716 2586 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	47909	56580	55206	-	0	ID=Contig1833_alignment_1;Target=Contig1833 164 9024 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	56580	57567	4053	-	0	ID=Contig645_alignment_1;Target=Contig645 1 988 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	56580	57299	6325	-	0	ID=Contig369_alignment_2;Target=Contig369 1 720 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	57422	57974	2880	+	0	ID=Contig455_alignment_1;Target=Contig455 673 1211 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	58398	59302	4666	+	0	ID=Contig1279_alignment_2;Target=Contig1279 199 1100 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	59500	59620	539	+	0	ID=Contig1618_alignment_1;Target=Contig1618 2 117 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	59828	59992	263	+	0	ID=Contig1217_alignment_1;Target=Contig1217 272 435 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	59866	59989	313	+	0	ID=Contig54_alignment_1;Target=Contig54 2 126 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	60341	60619	1150	+	0	ID=Contig1491_alignment_1;Target=Contig1491 2 283 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	64596	64741	573	+	0	ID=Contig2591_alignment_1;Target=Contig2591 367 510 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	73948	74157	1273	+	0	ID=Contig1227_alignment_1;Target=Contig1227 58 291 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	74156	74379	1150	+	0	ID=Contig1202_alignment_2;Target=Contig1202 7 244 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	75345	75464	247	+	0	ID=hind_R%3D6150_alignment_2;Target=hind_R%3D6150 283 404 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	75415	75489	339	+	0	ID=Contig2561_alignment_3;Target=Contig2561 217 291 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	75438	75498	328	-	0	ID=Contig436_alignment_1;Target=Contig436 197 257 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	75982	76231	1178	-	0	ID=Contig1209_alignment_1;Target=Contig1209 4 252 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	76385	76634	1487	-	0	ID=Contig1209_alignment_2;Target=Contig1209 8 253 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	77908	78918	6879	+	0	ID=Contig372_alignment_1;Target=Contig372 2 1011 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	79165	79470	2010	-	0	ID=Contig358_alignment_2;Target=Contig358 3 312 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	81900	82356	2981	-	0	ID=Contig240_alignment_1;Target=Contig240 1 452 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	82324	82397	319	-	0	ID=Contig240_alignment_2;Target=Contig240 862 926 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	83040	83154	536	-	0	ID=Contig1269_alignment_1;Target=Contig1269 18 142 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	85416	85570	692	+	0	ID=Contig121_alignment_1;Target=Contig121 1 145 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	86054	86199	747	-	0	ID=Contig121_alignment_2;Target=Contig121 1 145 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	86232	86283	290	-	0	ID=Contig121_alignment_3;Target=Contig121 1 52 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	86367	86746	1786	+	0	ID=Contig1833_alignment_2;Target=Contig1833 2667 3046 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	86859	86978	611	-	0	ID=Contig50_alignment_1;Target=Contig50 1 120 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	88012	88131	608	+	0	ID=Contig50_alignment_2;Target=Contig50 1 120 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	88417	88669	1819	+	0	ID=Contig469_alignment_1;Target=Contig469 1 262 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	88587	88707	704	+	0	ID=Contig95_alignment_1;Target=Contig95 1 121 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	89400	89727	2116	+	0	ID=Contig95_alignment_2;Target=Contig95 103 440 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	90303	90389	398	-	0	ID=Contig562_alignment_1;Target=Contig562 130 212 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	90407	91218	4485	-	0	ID=Contig386_alignment_2;Target=Contig386 9 709 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	90775	91218	2519	-	0	ID=Contig386_alignment_3;Target=Contig386 9 393 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	91285	91519	700	-	0	ID=Contig893_alignment_1;Target=Contig893 596 827 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	93629	93759	700	-	0	ID=Contig389_alignment_1;Target=Contig389 1664 1793 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	93636	93898	693	-	0	ID=Contig24_alignment_1;Target=Contig24 1960 2212 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	94533	95073	2411	+	0	ID=Contig382_alignment_3;Target=Contig382 1108 1659 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	95129	95225	381	+	0	ID=Contig26_alignment_3;Target=Contig26 298 394 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	95223	95875	4283	+	0	ID=Contig1193_alignment_3;Target=Contig1193 3 668 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	95412	98583	20238	-	0	ID=Contig104_alignment_5;Target=Contig104 1 3187 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	98572	99461	5935	-	0	ID=Contig427_alignment_2;Target=Contig427 1506 2402 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	98951	100343	8935	+	0	ID=Contig382_alignment_4;Target=Contig382 1 1408 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	100345	100509	771	+	0	ID=Contig382_alignment_5;Target=Contig382 1461 1627 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	100382	100696	1046	+	0	ID=Contig26_alignment_4;Target=Contig26 1 394 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	100703	100917	1203	+	0	ID=Contig1193_alignment_4;Target=Contig1193 13 238 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	101204	101279	229	-	0	ID=Contig746_alignment_2;Target=Contig746 273 349 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	103841	103910	326	+	0	ID=Contig598_alignment_1;Target=Contig598 598 665 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	103906	104052	1146	+	0	ID=Contig598_alignment_2;Target=Contig598 530 676 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	104051	104188	1164	+	0	ID=Contig598_alignment_3;Target=Contig598 749 886 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	109604	109818	754	-	0	ID=Contig525_alignment_1;Target=Contig525 76 293 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	109947	110203	711	+	0	ID=Contig151_alignment_2;Target=Contig151 327 588 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	112036	112180	660	+	0	ID=Contig1209_alignment_3;Target=Contig1209 1 152 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	112547	112631	429	-	0	ID=Contig372_alignment_2;Target=Contig372 2 86 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	112635	112708	255	+	0	ID=Contig1209_alignment_4;Target=Contig1209 148 222 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	113043	113845	1991	-	0	ID=Contig390_alignment_1;Target=Contig390 5700 6513 -
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	113985	114301	2154	+	0	ID=Contig95_alignment_3;Target=Contig95 114 440 +
C11HBa0029C01.1	RepeatMasker	nucleotide_motif	114302	116115	10570	+	0	ID=Contig381_alignment_1;Target=Contig381 1242 3140 +