ReleaseNotes ------------ FileDescription.txt: this file ReleaseNotes.txt: release notes for v2.30 in txt format ReleaseNotes.html: release notes for v2.30 in html format stats_ch_230.pdf: various stats for the pseudomolecules stats_sc_ct_230.pdf: various stats for the contigs and scaffolds Sequence data ------------- SL2.30ch.fasta: multi fasta files with the v2.30 tomato chromosomes (1 to 12 and chr 0) SL2.30sc.fasta: multi fasta files with the v2.30 scaffolds SL2.30ct.fasta: multi fasta files with the v2.30 contigs SL2.30ch_from_ct.agp: AGP file describing the contig order and orientation in the chromosomes SL2.30ch_from_sc.agp: AGP file describing the scaffold order and orientation in the chromosomes SL2.30sc_from_ct.agp: AGP file describing the contig order and orientation in the scaffolds BAC integration --------------- BAC_integration_summary.pdf: summary of the BAC integration procedure BAC_contig_members.txt: describes which individual BACs make up each BAC contig BACs_integrated.txt: list of BAC contigs that were integrated into the assembly BACs_not_integrated.txt: list of BAC contigs that could not be integrated into the assembly * Note: only phase 2 and phase 3 BACs were considered for integration