This directory contains genome assembly and annotation files for 14 Tomato accessions.

“{ACCESSION}_MAS2.0.fasta.gz” are the genome assemblies files for each accession.
“{ACCESSION}_MAS2.0_gene_models.gff.gz” contains the gene annotations.
“{ACCESSION}_MAS2.0_REPET_annotation.gff3.gz” contains the REPET repeat annotations.


Assemblies and annotations are available for the following accessions:

Brandywine (SLL)
M82 (SLL)
Floradade (SLL)
EA00371 (SLL)
LYC1410 (SLL)
EA00990 (SLL)
PI303721 (SLL)
PI169588 (SLL)
Fla.8924 (SLL)
BGV006865 (SLC)
BGV007989 (SLC)
BGV007931 (SLC)
PAS014479 (SP)
BGV006775 (SP)

SLL - S. lycopersicum
SLC - S. lyc. var. cerasiforme
SP - S. pimpinellifolium


For further information, please contact Zach B. Lippman (lippman@cshl.edu) or Michael C. Schatz (mschatz@cs.jhu.edu)